DYOGEN group
web-code version: 2014-07-06
database version: 30.01
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GenomicusMetazoa 30.01 contains 0 genes from 0 extant species.
This data was downloaded from EnsemblGenomes release .
A "contig" means a segment of the genome sequence assembly (chromosomes, scaffolds, contig) with at least two genes.
| Nematoda | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
|---|---|---|---|---|---|---|---|
| Caenorhabditis elegans | (extant sp.) | 20447 | 7 | 2921.0 | 3319 | 0 | 100.0% |
| Brugia malayi | (extant sp.) | 14219 | 740 | 15.7 | 82 | 2617 | 81.6% |
| Loa loa | (extant sp.) | 14908 | 873 | 15.5 | 35 | 1379 | 90.7% |
| Caenorhabditis remanei | (extant sp.) | 31444 | 1405 | 21.7 | 136 | 916 | 97.1% |
| Trichinella spiralis | (extant sp.) | 16380 | 465 | 29.4 | 1541 | 2688 | 83.6% |
| Onchocerca volvulus | (extant sp.) | 12994 | 162 | 79.1 | 3725 | 172 | 98.7% |
| Caenorhabditis brenneri | (extant sp.) | 30667 | 1172 | 25.7 | 97 | 581 | 98.1% |
| Pristionchus pacificus | (extant sp.) | 29201 | 593 | 47.5 | 153 | 1025 | 96.5% |
| Caenorhabditis japonica | (extant sp.) | 29964 | 2645 | 8.9 | 19 | 6493 | 78.3% |
| Caenorhabditis briggsae | (extant sp.) | 21936 | 12 | 1828.0 | 3346 | 0 | 100.0% |
| Diptera | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Drosophila pseudoobscura pseudoobscura | (extant sp.) | 15864 | 277 | 55.5 | 1481 | 492 | 96.9% |
| Drosophila ananassae | (extant sp.) | 15069 | 101 | 147.2 | 2762 | 203 | 98.7% |
| Megaselia scalaris | (extant sp.) | 11461 | 1658 | 2.4 | 2 | 7513 | 34.4% |
| Drosophila yakuba | (extant sp.) | 16077 | 209 | 75.0 | 2797 | 396 | 97.5% |
| Drosophila grimshawi | (extant sp.) | 14982 | 274 | 52.0 | 1449 | 745 | 95.0% |
| Drosophila sechellia | (extant sp.) | 16465 | 295 | 53.6 | 760 | 660 | 96.0% |
| Drosophila erecta | (extant sp.) | 15044 | 70 | 212.8 | 2856 | 149 | 99.0% |
| Drosophila virilis | (extant sp.) | 14491 | 72 | 199.3 | 1883 | 142 | 99.0% |
| Culex quinquefasciatus | (extant sp.) | 18968 | 1456 | 12.7 | 25 | 535 | 97.2% |
| Drosophila persimilis | (extant sp.) | 16874 | 247 | 65.3 | 483 | 755 | 95.5% |
| Drosophila melanogaster | (extant sp.) | 13918 | 9 | 1546.1 | 2734 | 3 | 100.0% |
| Anopheles darlingi | (extant sp.) | 10457 | 1267 | 7.5 | 12 | 894 | 91.5% |
| Drosophila willistoni | (extant sp.) | 15512 | 185 | 79.8 | 705 | 756 | 95.1% |
| Drosophila mojavensis | (extant sp.) | 14594 | 56 | 255.5 | 2603 | 285 | 98.0% |
| Aedes aegypti | (extant sp.) | 15796 | 1203 | 12.8 | 21 | 430 | 97.3% |
| Anopheles gambiae | (extant sp.) | 12843 | 7 | 1834.7 | 2875 | 0 | 100.0% |
| Drosophila simulans | (extant sp.) | 15413 | 245 | 59.7 | 2872 | 796 | 94.8% |
| Lepidoptera | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Danaus plexippus | (extant sp.) | 16254 | 2381 | 5.8 | 8 | 2563 | 84.2% |
| Melitaea cinxia | (extant sp.) | 16629 | 2812 | 5.4 | 7 | 1358 | 91.8% |
| Heliconius melpomene | (extant sp.) | 12669 | 1447 | 8.3 | 13 | 675 | 94.7% |
| Bombyx mori | (extant sp.) | 14623 | 309 | 46.6 | 151 | 209 | 98.6% |
| Hymenoptera | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Solenopsis invicta | (extant sp.) | 16385 | 1111 | 13.9 | 42 | 893 | 94.5% |
| Apis mellifera | (extant sp.) | 15314 | 227 | 62.3 | 861 | 1164 | 92.4% |
| Atta cephalotes | (extant sp.) | 18062 | 189 | 92.9 | 324 | 508 | 97.2% |
| Other Metazoa | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Tetranychus urticae | (extant sp.) | 18224 | 221 | 81.6 | 618 | 189 | 99.0% |
| Strigamia maritima | (extant sp.) | 14992 | 1139 | 12.6 | 28 | 663 | 95.6% |
| Pediculus humanus corporis | (extant sp.) | 10786 | 362 | 29.4 | 49 | 156 | 98.6% |
| Zootermopsis nevadensis | (extant sp.) | 14610 | 973 | 14.6 | 28 | 418 | 97.1% |
| Amphimedon queenslandica | (extant sp.) | 29883 | 2695 | 9.3 | 29 | 4876 | 83.7% |
| Tribolium castaneum | (extant sp.) | 16524 | 11 | 1502.2 | 1659 | 0 | 100.0% |
| Dendroctonus ponderosae | (extant sp.) | 13088 | 877 | 13.7 | 56 | 1116 | 91.5% |
| Ixodes scapularis | (extant sp.) | 20486 | 3118 | 5.0 | 7 | 4924 | 76.0% |
| Nematostella vectensis | (extant sp.) | 24773 | 1431 | 15.4 | 57 | 2667 | 89.2% |
| Strongylocentrotus purpuratus | (extant sp.) | 28842 | 2871 | 9.6 | 16 | 1338 | 95.4% |
| Schistosoma mansoni | (extant sp.) | 10772 | 263 | 40.4 | 866 | 156 | 98.6% |
| Crassostrea gigas | (extant sp.) | 26089 | 2182 | 11.4 | 21 | 1132 | 95.7% |
| Capitella teleta | (extant sp.) | 32175 | 2431 | 11.3 | 27 | 4652 | 85.5% |
| Helobdella robusta | (extant sp.) | 23432 | 267 | 86.1 | 328 | 453 | 98.1% |
| Mnemiopsis leidyi | (extant sp.) | 16058 | 1154 | 13.4 | 22 | 537 | 96.7% |
| Rhodnius prolixus | (extant sp.) | 15438 | 1167 | 11.5 | 25 | 2044 | 86.8% |
| Acyrthosiphon pisum | (extant sp.) | 36195 | 2165 | 14.8 | 37 | 4098 | 88.7% |
| Nasonia vitripennis | (extant sp.) | 17083 | 968 | 16.7 | 435 | 927 | 94.6% |
| Lottia gigantea | (extant sp.) | 23340 | 577 | 39.5 | 161 | 547 | 97.7% |
| Daphnia pulex | (extant sp.) | 30590 | 1193 | 24.1 | 157 | 1786 | 94.2% |
| Trichoplax adhaerens | (extant sp.) | 11520 | 176 | 63.2 | 745 | 392 | 96.6% |