GenomicusPlants v41.01 Title
GenomicusPlants v41.01 Logo


DYOGEN group

web-code version: 2017-06-13
database version: 41.01
Tweets by GenomicusDB

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Enter a gene name or a CNE name (Ensembl nomenclature or approved gene symbol)
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Advanced Options
-evalue <Real>
Expectation value (E) threshold for saving hits
Default = '10'
-word_size <Integer, >=2>
Word size for wordfinder algorithm
Default = '3'
-gapopen <Integer>
Cost to open a gap
Default = '11'
-gapextend <Integer>
Cost to extend a gap
Default = '1'
-matrix <String>
Scoring matrix name (normally BLOSUM62)
-threshold <Real, >=0>
Minimum word score such that the word is added to the BLAST lookup table
Default = '11'
-window_size <Integer, >=0>
Multiple hits window size, use 0 to specify 1-hit algorithm
Default = '40'