![]() |
![]() |
|
![]() |
![]() |
![]() |
Root species for CAMK2D (ENSOARG00020014242) (Rambouillet Sheep) | AlignView depth | PhyloView depth | |
---|---|---|---|
Fungi/Metazoa group | ![]() |
399 species ![]() |
|
Bilateria | ![]() |
397 species ![]() |
|
Chordata | ![]() |
393 species ![]() |
|
Vertebrata | ![]() |
389 species ![]() |
671 homologs (oldest homol.) ![]() |
Gnathostomata | ![]() |
385 species ![]() |
665 homologs (dupl. node) ![]() 271 homologs ![]() |
Euteleostomi | ![]() |
383 species ![]() |
269 homologs ![]() |
Sarcopterygii | ![]() |
253 species ![]() |
144 homologs ![]() |
Tetrapoda | ![]() |
251 species ![]() |
143 homologs ![]() |
Amniota | ![]() |
247 species ![]() |
142 homologs ![]() |
Mammalia | ![]() |
193 species ![]() |
122 homologs ![]() |
Theria | ![]() |
191 species ![]() |
121 homologs ![]() |
Eutheria | ![]() |
181 species ![]() |
120 homologs ![]() |
Boreoeutheria | ![]() |
171 species ![]() |
115 homologs ![]() |
Laurasiatheria | ![]() |
75 species ![]() |
54 homologs ![]() |
Laurasiatheria_a | ![]() |
71 species ![]() |
53 homologs ![]() |
Artiodactyla | ![]() |
37 species ![]() |
28 homologs ![]() |
Artiodactyla_a | ![]() |
33 species ![]() |
24 homologs ![]() |
Artiodactyla_b | ![]() |
29 species ![]() |
23 homologs ![]() |
Pecora | ![]() |
17 species ![]() |
13 homologs ![]() |
Percora_a | ![]() |
15 species ![]() |
11 homologs ![]() |
Bovidae | ![]() |
13 species ![]() |
9 homologs ![]() |
Caprinae | ![]() |
3 species ![]() |
2 homologs ![]() |
Rambouillet Sheep | ![]() |
1 species ![]() |
1 homolog ![]() |
-evalue <Real>
Expectation value (E) threshold for saving hits
Default = '10'
-word_size <Integer, >=2>
Word size for wordfinder algorithm
Default = '3'
-gapopen <Integer>
Cost to open a gap
Default = '11'
-gapextend <Integer>
Cost to extend a gap
Default = '1'
-matrix <String>
Scoring matrix name (normally BLOSUM62)
-threshold <Real, >=0>
Minimum word score such that the word is added to the BLAST lookup table
Default = '11'
-window_size <Integer, >=0>
Multiple hits window size, use 0 to specify 1-hit algorithm
Default = '40'