Sarcopterygii ANCESTRAL SPECIES ENSGT00940000165097 #22 Tetrapoda DUPLICATION Tetrapoda ANCESTRAL SPECIES 517 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 Anura DUPLICATION Anura ANCESTRAL SPECIES 25 ENSGT01030000234610.b.a.b.b ENSGT00940000156696.B ENSGT00940000157732 ENSGT00390000000909 #8 ENSGT00940000156184 #9 ENSGT00940000168158 ENSGT00940000163514.C #10 ENSGT00390000018550 #11 ENSGT00940000155351 #12 ENSGT00940000163896 #13 ENSGT01030000234549.a.b #14 ENSGT00570000079216 #16 ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000165097.a.a #22 ENSGT00940000165097.b #23 ENSGT00940000165097.a.b #25 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Frog DUPLICATION Frog MODERN SPECIES 7 ENSXETG00000047506 #7 stn1 (ENSXETG00000011402) #8 slk (ENSXETG00000030054) #9 col17a1 (ENSXETG00000033563) #10 sfr1 (ENSXETG00000011407) #11 gsto2 (ENSXETG00000026602) #12 gsto1 (ENSXETG00000026601) #13 ENSXETG00000014777 #14 ENSXETG00000042597 #15 cfap46 (ENSXETG00000014784) #16 XB5799637 (ENSXETG00000026599) #17 ENSXETG00000037556 #18 ENSXETG00000046321 #19 ENSXETG00000014782 #20 kndc1 (ENSXETG00000008873) #21 ventx2.1 (ENSXETG00000026798) #22 ventx1.1 (ENSXETG00000034053) #23 ventx2.2 (ENSXETG00000026796) #24 ventx3.1 (ENSXETG00000032888) #25 ventx1.2 (ENSXETG00000008879) #26 ventx3.2 (ENSXETG00000033622) #27 ENSXETG00000042979 #28 XB5817455 [provisional:hs3st1] (ENSXETG00000008881) #29 dntt (ENSXETG00000038776) #30 ENSXETG00000047300 #31 blnk (ENSXETG00000012184) #32 znf518a (ENSXETG00000012185) #33 ccnj (ENSXETG00000048983) #34 dusp11.2 (ENSXETG00000012187) #35 ENSXETG00000043700 #36 btaf1 (ENSXETG00000012188) #37 Frog MODERN SPECIES 7 ENSXETG00000044591 ##7 cpeb3 (ENSXETG00000012190) btaf1 (ENSXETG00000012188) #37 ENSXETG00000043700 #36 dusp11.2 (ENSXETG00000012187) #35 ccnj (ENSXETG00000048983) #34 znf518a (ENSXETG00000012185) #33 blnk (ENSXETG00000012184) #32 ENSXETG00000047300 #31 dntt (ENSXETG00000038776) #30 XB5817455 [provisional:hs3st1] (ENSXETG00000008881) #29 ENSXETG00000042979 #28 ventx3.2 (ENSXETG00000033622) #27 ventx1.2 (ENSXETG00000008879) #26 ventx3.1 (ENSXETG00000032888) #25 ventx2.2 (ENSXETG00000026796) #24 ventx1.1 (ENSXETG00000034053) #23 ventx2.1 (ENSXETG00000026798) #22 kndc1 (ENSXETG00000008873) #21 ENSXETG00000014782 #20 ENSXETG00000046321 #19 ENSXETG00000037556 #18 XB5799637 (ENSXETG00000026599) #17 cfap46 (ENSXETG00000014784) #16 ENSXETG00000042597 #15 ENSXETG00000014777 #14 gsto1 (ENSXETG00000026601) #13 gsto2 (ENSXETG00000026602) #12 sfr1 (ENSXETG00000011407) #11 col17a1 (ENSXETG00000033563) #10 slk (ENSXETG00000030054) #9 Leishan spiny toad MODERN SPECIES 9 UBTD1 (ENSLLEG00000020541) ENSLLEG00000020496 MMS19 (ENSLLEG00000020197) ZDHHC16 (ENSLLEG00000020093) EXOSC1 (ENSLLEG00000020023) SFR1 (ENSLLEG00000019900) #11 ENSLLEG00000019799 #12 ENSLLEG00000019667 #13 ENSLLEG00000019627 ENSLLEG00000019580 #14 CFAP46 (ENSLLEG00000016841) #16 ENSLLEG00000016671 #17 ADGRA1 (ENSLLEG00000016103) #20 ENSLLEG00000015945 #12 KNDC1 (ENSLLEG00000015708) #21 ENSLLEG00000015666 #22 ENSLLEG00000015597 #25 ENSLLEG00000015558 ENSLLEG00000015533 #29 ENSLLEG00000015494 ENSLLEG00000015475 ENSLLEG00000015457 ##19 ENSLLEG00000015408 DNTT (ENSLLEG00000015306) #30 ENSLLEG00000014433 #32 ZNF518A (ENSLLEG00000014374) #33 CCNJ (ENSLLEG00000014311) #34 ENSLLEG00000014192 #35 BTAF1 (ENSLLEG00000012963) #37 CPEB3 (ENSLLEG00000012747) ENSLLEG00000012718 Anura ANCESTRAL SPECIES 25 ENSGT00800000124060.B ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a.b #25 ENSGT00940000165097.b #23 ENSGT00940000165097.a.a #22 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT00570000079216 #16 ENSGT01030000234549.a.b #14 ENSGT00940000163896 #13 ENSGT00940000155351 #12 ENSGT00390000018550 #11 ENSGT00940000163514.C #10 ENSGT00940000168158 ENSGT00940000156184 #9 ENSGT00390000000909 #8 ENSGT00940000157732 Frog DUPLICATION Frog MODERN SPECIES 7 ide (ENSXETG00000030851) marchf5 (ENSXETG00000038834) ENSXETG00000042407 ##7 ENSXETG00000044591 ##7 cpeb3 (ENSXETG00000012190) btaf1 (ENSXETG00000012188) #37 ENSXETG00000043700 #36 dusp11.2 (ENSXETG00000012187) #35 ccnj (ENSXETG00000048983) #34 znf518a (ENSXETG00000012185) #33 blnk (ENSXETG00000012184) #32 ENSXETG00000047300 #31 dntt (ENSXETG00000038776) #30 XB5817455 [provisional:hs3st1] (ENSXETG00000008881) #29 ENSXETG00000042979 #28 ventx3.2 (ENSXETG00000033622) #27 ventx1.2 (ENSXETG00000008879) #26 ventx3.1 (ENSXETG00000032888) #25 ventx2.2 (ENSXETG00000026796) #24 ventx1.1 (ENSXETG00000034053) #23 ventx2.1 (ENSXETG00000026798) #22 kndc1 (ENSXETG00000008873) #21 ENSXETG00000014782 #20 ENSXETG00000046321 #19 ENSXETG00000037556 #18 XB5799637 (ENSXETG00000026599) #17 cfap46 (ENSXETG00000014784) #16 ENSXETG00000042597 #15 ENSXETG00000014777 #14 gsto1 (ENSXETG00000026601) #13 gsto2 (ENSXETG00000026602) #12 Frog MODERN SPECIES 7 col17a1 (ENSXETG00000033563) #10 sfr1 (ENSXETG00000011407) #11 gsto2 (ENSXETG00000026602) #12 gsto1 (ENSXETG00000026601) #13 ENSXETG00000014777 #14 ENSXETG00000042597 #15 cfap46 (ENSXETG00000014784) #16 XB5799637 (ENSXETG00000026599) #17 ENSXETG00000037556 #18 ENSXETG00000046321 #19 ENSXETG00000014782 #20 kndc1 (ENSXETG00000008873) #21 ventx2.1 (ENSXETG00000026798) #22 ventx1.1 (ENSXETG00000034053) #23 ventx2.2 (ENSXETG00000026796) #24 ventx3.1 (ENSXETG00000032888) #25 ventx1.2 (ENSXETG00000008879) #26 ventx3.2 (ENSXETG00000033622) #27 ENSXETG00000042979 #28 XB5817455 [provisional:hs3st1] (ENSXETG00000008881) #29 dntt (ENSXETG00000038776) #30 ENSXETG00000047300 #31 blnk (ENSXETG00000012184) #32 znf518a (ENSXETG00000012185) #33 ccnj (ENSXETG00000048983) #34 dusp11.2 (ENSXETG00000012187) #35 ENSXETG00000043700 #36 btaf1 (ENSXETG00000012188) #37 cpeb3 (ENSXETG00000012190) ENSXETG00000044591 ##7 ENSXETG00000042407 ##7 Leishan spiny toad MODERN SPECIES 9 MARCHF5 (ENSLLEG00000012358) ENSLLEG00000012718 CPEB3 (ENSLLEG00000012747) BTAF1 (ENSLLEG00000012963) #37 ENSLLEG00000014192 #35 CCNJ (ENSLLEG00000014311) #34 ZNF518A (ENSLLEG00000014374) #33 ENSLLEG00000014433 #32 DNTT (ENSLLEG00000015306) #30 ENSLLEG00000015408 ENSLLEG00000015457 ##19 ENSLLEG00000015475 ENSLLEG00000015494 ENSLLEG00000015533 #29 ENSLLEG00000015558 ENSLLEG00000015597 #25 ENSLLEG00000015666 #22 KNDC1 (ENSLLEG00000015708) #21 ENSLLEG00000015945 #12 ADGRA1 (ENSLLEG00000016103) #20 ENSLLEG00000016671 #17 CFAP46 (ENSLLEG00000016841) #16 ENSLLEG00000019580 #14 ENSLLEG00000019627 ENSLLEG00000019667 #13 ENSLLEG00000019799 #12 SFR1 (ENSLLEG00000019900) #11 EXOSC1 (ENSLLEG00000020023) ZDHHC16 (ENSLLEG00000020093) MMS19 (ENSLLEG00000020197) ENSLLEG00000020496 Amniota ANCESTRAL SPECIES 289 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 Mammalia ANCESTRAL SPECIES 281 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 Platypus MODERN SPECIES 14 GLRX3 (ENSOANG00000044992) TCERG1L (ENSOANG00000028768) PPP2R2D (ENSOANG00000020812) BNIP3 (ENSOANG00000047658) JAKMIP3 (ENSOANG00000040987) DPYSL4 (ENSOANG00000012014) ENSOANG00000043295 STK32C (ENSOANG00000028820) PWWP2B (ENSOANG00000048527) INPP5A (ENSOANG00000047999) ENSOANG00000045525 ENSOANG00000030741 #16 ENSOANG00000031751 #16 ENSOANG00000037554 #20 KNDC1 (ENSOANG00000043430) #21 ENSOANG00000045576 #22 ENSOANG00000038955 #23 ENSOANG00000043873 TUBGCP2 (ENSOANG00000038079) ENSOANG00000007714 ENSOANG00000039545 ENSOANG00000039592 FUOM (ENSOANG00000042156) ECHS1 (ENSOANG00000002523) PAOX (ENSOANG00000036296) MTG1 (ENSOANG00000011497) SPRN (ENSOANG00000038663) ENSOANG00000014311 ENSOANG00000010942 ENSOANG00000010019 ENSOANG00000012861 Sauria ANCESTRAL SPECIES 229 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 Archelosauria ANCESTRAL SPECIES 10 ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156590 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165215 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT00570000079216 #16 ENSGT01030000234549.a.b #14 ENSGT00940000161547 ENSGT00390000015226.d ENSGT00940000160735 ENSGT00390000007203 ENSGT00940000160573 ENSGT01030000234527.A.a.b.a.b ENSGT00940000153713.E ENSGT00390000013415.a.a Cryptodira ANCESTRAL SPECIES ENSGT00940000165097.a #22 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000168004 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00960000190513 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT00570000079216 #16 ENSGT01030000234549.a.b #14 ENSGT00940000161547 ENSGT00390000015226.d ENSGT00940000160735 ENSGT00390000007203 ENSGT00940000160573 ENSGT01030000234527.A.a.b.a.b ENSGT00940000153713.E ENSGT00390000013415.a.a Emydidae ANCESTRAL SPECIES 6 ENSGT00800000124060.B ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000168004 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00960000190513 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT00570000079216 #16 ENSGT01030000234549.a.b #14 ENSGT00940000161547 ENSGT00390000015226.d ENSGT00940000160735 ENSGT00390000007203 ENSGT00940000160573 ENSGT01030000234527.A.a.b.a.b ENSGT00940000153713.E ENSGT00390000013415.a.a painted turtle MODERN SPECIES 2398 GPM6A (ENSCPBG00000003095) ENSCPBG00000003119 ENSCPBG00000003132 ENSCPBG00000003152 WDR17 (ENSCPBG00000003187) SPATA4 (ENSCPBG00000003310) ASB5 (ENSCPBG00000003322) SPCS3 (ENSCPBG00000003333) VEGFC (ENSCPBG00000003340) NEIL3 (ENSCPBG00000003366) AGA (ENSCPBG00000003373) ENSCPBG00000003388 ENSCPBG00000003431 #29 ENSCPBG00000003472 #22 ENSCPBG00000003476 ENSCPBG00000003486 KNDC1 (ENSCPBG00000003512) #21 Testudinidae ANCESTRAL SPECIES ENSGT00940000165097.a #22 Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005019341 ENSGEVG00005019201 MARCHF5 (ENSGEVG00005019176) CPEB3 (ENSGEVG00005019158) BTAF1 (ENSGEVG00005019122) #37 ENSGEVG00005019100 #35 ENSGEVG00005019092 ENSGEVG00005019083 CCNJ (ENSGEVG00005019063) #34 ZNF518A (ENSGEVG00005019060) #33 BLNK (ENSGEVG00005019008) #32 DNTT (ENSGEVG00005018928) #30 ENSGEVG00005018903 #29 ENSGEVG00005018893 ENSGEVG00005018876 ENSGEVG00005018861 #22 ENSGEVG00005018828 ENSGEVG00005018812 #21 ADGRA1 (ENSGEVG00005018796) #20 ENSGEVG00005018774 #17 ENSGEVG00005018702 #16 ENSGEVG00005018656 #14 NKX6-2 (ENSGEVG00005018624) INPP5A (ENSGEVG00005018557) PWWP2B (ENSGEVG00005018522) LRRC27 (ENSGEVG00005018494) STK32C (ENSGEVG00005018456) DPYSL4 (ENSGEVG00005018161) JAKMIP3 (ENSGEVG00005017824) BNIP3 (ENSGEVG00005017778) PPP2R2D (ENSGEVG00005017762) Archosauria ANCESTRAL SPECIES 7 ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156590 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Aves ANCESTRAL SPECIES 6 ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156590 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Neognathae ANCESTRAL SPECIES 7 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Galloanserae ANCESTRAL SPECIES 6 ENSGT00800000124060.B ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Phasianidae ANCESTRAL SPECIES 6 ENSGT00800000124060.B ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000164435 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Phasianidae_b ANCESTRAL SPECIES 6 ENSGT00800000124060.B ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000164435 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 ENSGT00950000183082.b.b.b Chicken MODERN SPECIES 35 CYP26A1 (ENSGALG00010020413) CYP26C1 (ENSGALG00010017781) EXOC6 (ENSGALG00010017859) HHEX (ENSGALG00010018471) KIF11 (ENSGALG00010021378) IDE (ENSGALG00010021405) MARCH5 (ENSGALG00010021484) CPEB3 (ENSGALG00010021518) BTAF1 (ENSGALG00010021529) #37 ENSGALG00010021566 #35 ZNF518A (ENSGALG00010021621) #33 CCNJ (ENSGALG00010021633) #34 DNTT (ENSGALG00010021672) #30 SH2D6 (ENSGALG00010021725) #32 ENSGALG00010021773 #29 ENSGALG00010021780 #22 VENTX (ENSGALG00010021787) #23 VENTX (ENSGALG00010021796) ENSGALG00010021842 #21 ADGRA1 (ENSGALG00010021966) #20 ENSGALG00010021994 #17 ENTPD1 (ENSGALG00010022100) CPN1 (ENSGALG00010022154) DNMBP (ENSGALG00010022200) ENSGALG00010022211 CUTC (ENSGALG00010022221) COX15 (ENSGALG00010022234) ENTPD7 (ENSGALG00010022244) SLC25A28 (ENSGALG00010022250) NKX2-3 (ENSGALG00010018311) ENSGALG00010018318 Japanese quail MODERN SPECIES 24 MYOF (ENSCJPG00005019188) CYP26A1 (ENSCJPG00005019490) CYP26C1 (ENSCJPG00005019491) EXOC6 (ENSCJPG00005019493) ENSCJPG00005019495 KIF11 (ENSCJPG00005019496) IDE (ENSCJPG00005019497) MARCHF5 (ENSCJPG00005019498) BTAF1 (ENSCJPG00005019499) #37 ENSCJPG00005019500 #35 CCNJ (ENSCJPG00005019501) #34 ZNF518A (ENSCJPG00005019503) #33 BLNK (ENSCJPG00005019504) #32 DNTT (ENSCJPG00005019505) #30 ENSCJPG00005019508 #29 ENSCJPG00005019511 #22 ENSCJPG00005019512 #23 VENTX (ENSCJPG00005019513) ENSCJPG00005019514 #21 ADGRA1 (ENSCJPG00005019517) #20 ENSCJPG00005019518 #17 ENTPD1 (ENSCJPG00005019520) CPN1 (ENSCJPG00005019521) DNMBP (ENSCJPG00005019522) ENSCJPG00005019523 COX15 (ENSCJPG00005019524) CUTC (ENSCJPG00005019525) ATP6V0E2 (ENSCJPG00005019526) ENTPD7 (ENSCJPG00005019527) SLC25A28 (ENSCJPG00005019528) NKX2-3 (ENSCJPG00005019530) Anatidae ANCESTRAL SPECIES 4 ENSGT00940000154741 ENSGT00800000124060.B ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00950000183082.b.b.b Pink-footed goose MODERN SPECIES 233 CYP26C1 (ENSABRG00000018471) EXOC6 (ENSABRG00000018485) HHEX (ENSABRG00000018497) KIF11 (ENSABRG00000018500) IDE (ENSABRG00000018517) MARCHF5 (ENSABRG00000018528) ENSABRG00000018533 CPEB3 (ENSABRG00000018536) BTAF1 (ENSABRG00000018538) #37 ENSABRG00000018548 #35 CCNJ (ENSABRG00000018557) #34 ZNF518A (ENSABRG00000018567) #33 BLNK (ENSABRG00000018580) #32 DNTT (ENSABRG00000000200) #30 ENSABRG00000000315 #29 ENSABRG00000000336 #22 ENSABRG00000000350 #23 VENTX (ENSABRG00000000366) Neognathae_b ANCESTRAL SPECIES 8 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Passeriformes ANCESTRAL SPECIES 10 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00940000163757 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Passeriformes_g ANCESTRAL SPECIES 8 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00960000190513 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Passeroidea ANCESTRAL SPECIES 7 ENSGT00800000124060.A.b ENSGT00390000005739.a.b ENSGT00940000161748 ENSGT00940000155921 ENSGT00940000155780 ENSGT00390000009948.c ENSGT00940000158949 ENSGT00940000157500 #37 ENSGT00940000173803 ENSGT00940000155847 #35 ENSGT00940000156981 #34 ENSGT00940000162006 #33 ENSGT00940000155715 #32 ENSGT00940000158584 #30 ENSGT00940000164759 #29 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 ENSGT00960000190513 ENSGT00390000011408 #21 ENSGT00940000160175.b #20 ENSGT00940000164278 #17 ENSGT01100000263542.C ENSGT00940000158235 ENSGT00950000183088.a.b.a ENSGT00940000164383 ENSGT00390000008454 ENSGT00390000002223 ENSGT00940000162476 ENSGT01100000263540.B.c ENSGT00940000157049 ENSGT00940000157556 Zebra finch MODERN SPECIES 28 CYP26A1 (ENSTGUG00000008850) CYP26C1 (ENSTGUG00000008860) EXOC6 (ENSTGUG00000008869) HHEX (ENSTGUG00000008924) MARCHF5 (ENSTGUG00000008982) KIF11 (ENSTGUG00000008927) IDE (ENSTGUG00000008951) CPEB3 (ENSTGUG00000008988) BTAF1 (ENSTGUG00000009009) #37 ENSTGUG00000027411 #35 CCNJ (ENSTGUG00000009052) #34 ZNF518A (ENSTGUG00000022696) #33 BLNK (ENSTGUG00000009065) #32 DNTT (ENSTGUG00000009071) #30 ENSTGUG00000020085 #29 ENSTGUG00000028890 #22 ENSTGUG00000009093 #23 ENSTGUG00000028139 KNDC1 (ENSTGUG00000009094) #21 ADGRA1 (ENSTGUG00000009101) #20 ENSTGUG00000009131 #17 ENTPD1 (ENSTGUG00000009148) CPN1 (ENSTGUG00000009169) DNMBP (ENSTGUG00000009180) ENSTGUG00000009186 CUTC (ENSTGUG00000009354) COX15 (ENSTGUG00000009368) ATP6V0E2 (ENSTGUG00000009386) ENTPD7 (ENSTGUG00000009398) SLC25A28 (ENSTGUG00000009410) NKX2-3 (ENSTGUG00000009415) Common canary MODERN SPECIES 7 EXOC6 (ENSSCAG00000016841) HHEX (ENSSCAG00000016840) KIF11 (ENSSCAG00000016838) IDE (ENSSCAG00000016836) MARCHF5 (ENSSCAG00000016834) CPEB3 (ENSSCAG00000016832) BTAF1 (ENSSCAG00000016827) #37 ENSSCAG00000016818 ENSSCAG00000016817 #35 CCNJ (ENSSCAG00000016815) #34 ZNF518A (ENSSCAG00000016814) #33 BLNK (ENSSCAG00000016809) #32 DNTT (ENSSCAG00000016804) #30 ENSSCAG00000016802 #29 ENSSCAG00000016801 ENSSCAG00000016797 #22 KNDC1 (ENSSCAG00000016790) #21 ADGRA1 (ENSSCAG00000016784) #20 ENSSCAG00000016775 #17 ENTPD1 (ENSSCAG00000016768) CPN1 (ENSSCAG00000016764) DNMBP (ENSSCAG00000016756) ENSSCAG00000016744 CUTC (ENSSCAG00000016738) COX15 (ENSSCAG00000016735) ATP6V0E2 (ENSSCAG00000016732) ENTPD7 (ENSSCAG00000016728) SLC25A28 (ENSSCAG00000016727) ENSSCAG00000016725 GOT1 (ENSSCAG00000016723) CNNM1 (ENSSCAG00000016720) Tetrapoda ANCESTRAL SPECIES 517 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 Amniota ANCESTRAL SPECIES 289 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 Sauria ANCESTRAL SPECIES 229 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 Archelosauria ANCESTRAL SPECIES 10 ENSGT00950000182864.a.a ENSGT00390000013415.a.a ENSGT00940000153713.E ENSGT01030000234527.A.a.b.a.b ENSGT00940000160573 ENSGT00390000007203 ENSGT00940000160735 ENSGT00390000015226.d ENSGT00940000161547 ENSGT01030000234549.a.b #14 ENSGT00570000079216 #16 ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000165215 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000156590 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 Archosauria ANCESTRAL SPECIES 7 ENSGT00940000177979 ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000156590 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 Aves ANCESTRAL SPECIES 6 ENSGT00940000177979 ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000156590 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 Neognathae ANCESTRAL SPECIES 7 ENSGT00940000177979 ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Galloanserae ANCESTRAL SPECIES 6 ENSGT00940000177979 ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b ENSGT00800000124060.A.b Anatidae ANCESTRAL SPECIES 4 ENSGT00940000177979 ENSGT00950000183082.b.b.b ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b ENSGT00800000124060.A.b ENSGT00800000124060.B Pink-footed goose MODERN SPECIES 233 VENTX (ENSABRG00000000366) ENSABRG00000000350 #23 ENSABRG00000000336 #22 ENSABRG00000000315 #29 DNTT (ENSABRG00000000200) #30 BLNK (ENSABRG00000018580) #32 ZNF518A (ENSABRG00000018567) #33 CCNJ (ENSABRG00000018557) #34 ENSABRG00000018548 #35 BTAF1 (ENSABRG00000018538) #37 CPEB3 (ENSABRG00000018536) ENSABRG00000018533 MARCHF5 (ENSABRG00000018528) IDE (ENSABRG00000018517) KIF11 (ENSABRG00000018500) HHEX (ENSABRG00000018497) EXOC6 (ENSABRG00000018485) Duck MODERN SPECIES 24 GOLGA7B (ENSAPLG00000018711) CRTAC1 (ENSAPLG00000011099) ENSAPLG00000019744 HPSE2 (ENSAPLG00000027024) CNNM1 (ENSAPLG00000007945) ENSAPLG00000023058 GOT1 (ENSAPLG00000008121) CUTC (ENSAPLG00000029466) ENSAPLG00000008620 DNMBP (ENSAPLG00000010732) CPN1 (ENSAPLG00000011182) ENTPD1 (ENSAPLG00000011301) ENSAPLG00000012001 #17 ENSAPLG00000012029 #20 KNDC1 (ENSAPLG00000012166) #21 ENSAPLG00000017553 #23 ENSAPLG00000024228 ENSAPLG00000018699 #29 DNTT (ENSAPLG00000012429) #30 BLNK (ENSAPLG00000006563) #32 ZNF518A (ENSAPLG00000030969) #33 ENSAPLG00000006466 #35 BTAF1 (ENSAPLG00000006110) #37 CPEB3 (ENSAPLG00000014437) MARCHF5 (ENSAPLG00000005697) IDE (ENSAPLG00000004758) KIF11 (ENSAPLG00000004051) EXOC6 (ENSAPLG00000003365) CYP26C1 (ENSAPLG00000021874) CYP26A1 (ENSAPLG00000002859) MYOF (ENSAPLG00000015881) Phasianidae ANCESTRAL SPECIES 6 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000164435 ENSGT00390000005739.a.b ENSGT00800000124060.A.b Japanese quail MODERN SPECIES 24 GOT1 (ENSCJPG00005019532) NKX2-3 (ENSCJPG00005019530) SLC25A28 (ENSCJPG00005019528) ENTPD7 (ENSCJPG00005019527) ATP6V0E2 (ENSCJPG00005019526) CUTC (ENSCJPG00005019525) COX15 (ENSCJPG00005019524) ENSCJPG00005019523 DNMBP (ENSCJPG00005019522) CPN1 (ENSCJPG00005019521) ENTPD1 (ENSCJPG00005019520) ENSCJPG00005019518 #17 ADGRA1 (ENSCJPG00005019517) #20 ENSCJPG00005019514 #21 VENTX (ENSCJPG00005019513) ENSCJPG00005019512 #23 ENSCJPG00005019511 #22 ENSCJPG00005019508 #29 DNTT (ENSCJPG00005019505) #30 BLNK (ENSCJPG00005019504) #32 ZNF518A (ENSCJPG00005019503) #33 CCNJ (ENSCJPG00005019501) #34 ENSCJPG00005019500 #35 BTAF1 (ENSCJPG00005019499) #37 MARCHF5 (ENSCJPG00005019498) IDE (ENSCJPG00005019497) KIF11 (ENSCJPG00005019496) ENSCJPG00005019495 EXOC6 (ENSCJPG00005019493) CYP26C1 (ENSCJPG00005019491) CYP26A1 (ENSCJPG00005019490) Phasianidae_b ANCESTRAL SPECIES 6 ENSGT00940000177979 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000164435 ENSGT00390000005739.a.b ENSGT00800000124060.A.b Chicken MODERN SPECIES 35 GOT1 (ENSGALG00010018323) ENSGALG00010018318 NKX2-3 (ENSGALG00010018311) SLC25A28 (ENSGALG00010022250) ENTPD7 (ENSGALG00010022244) COX15 (ENSGALG00010022234) CUTC (ENSGALG00010022221) ENSGALG00010022211 DNMBP (ENSGALG00010022200) CPN1 (ENSGALG00010022154) ENTPD1 (ENSGALG00010022100) ENSGALG00010021994 #17 ADGRA1 (ENSGALG00010021966) #20 ENSGALG00010021842 #21 VENTX (ENSGALG00010021796) VENTX (ENSGALG00010021787) #23 ENSGALG00010021780 #22 ENSGALG00010021773 #29 SH2D6 (ENSGALG00010021725) #32 DNTT (ENSGALG00010021672) #30 CCNJ (ENSGALG00010021633) #34 ZNF518A (ENSGALG00010021621) #33 ENSGALG00010021566 #35 BTAF1 (ENSGALG00010021529) #37 CPEB3 (ENSGALG00010021518) MARCH5 (ENSGALG00010021484) IDE (ENSGALG00010021405) KIF11 (ENSGALG00010021378) HHEX (ENSGALG00010018471) EXOC6 (ENSGALG00010017859) CYP26C1 (ENSGALG00010017781) Turkey MODERN SPECIES 28 ENSMGAG00000022276 GOT1 (ENSMGAG00000009531) SLC25A28 (ENSMGAG00000019966) ENSMGAG00000020994 COX15 (ENSMGAG00000009501) ENSMGAG00000009482 ENSMGAG00000009405 DNMBP (ENSMGAG00000009389) ENSMGAG00000009366 ENSMGAG00000009343 ENSMGAG00000009328 #17 ADGRA1 (ENSMGAG00000009318) #20 ENSMGAG00000021605 #21 ENSMGAG00000009303 #21 ENSMGAG00000020680 ENSMGAG00000022311 #23 ENSMGAG00000015334 #29 DNTT (ENSMGAG00000009285) #30 ENSMGAG00000009217 #32 ZNF518A (ENSMGAG00000009213) #33 ENSMGAG00000009211 #34 ENSMGAG00000009201 #35 BTAF1 (ENSMGAG00000009165) #37 CPEB3 (ENSMGAG00000009148) MARCHF5 (ENSMGAG00000009141) IDE (ENSMGAG00000009110) KIF11 (ENSMGAG00000009062) ENSMGAG00000009052 EXOC6 (ENSMGAG00000009010) CYP26C1 (ENSMGAG00000021162) CYP26A1 (ENSMGAG00000008978) Neognathae_b ANCESTRAL SPECIES 8 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Neognathae_c ANCESTRAL SPECIES 8 ENSGT00940000177979 ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000168004 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b ENSGT00800000124060.A.b Kakapo MODERN SPECIES 22 SLC25A28 (ENSSHBG00005020773) ENTPD7 (ENSSHBG00005020766) ATP6V0E2 (ENSSHBG00005020762) COX15 (ENSSHBG00005020758) CUTC (ENSSHBG00005020740) ENSSHBG00005020733 DNMBP (ENSSHBG00005020724) CPN1 (ENSSHBG00005020718) ENTPD1 (ENSSHBG00005020713) ENSSHBG00005020708 #17 ADGRA1 (ENSSHBG00005020702) #20 ENSSHBG00005020698 #21 ENSSHBG00005020690 #21 ENSSHBG00005020686 #21 VENTX (ENSSHBG00005020681) ENSSHBG00005020676 #23 ENSSHBG00005020668 #29 DNTT (ENSSHBG00005020661) #30 BLNK (ENSSHBG00005020648) #32 ZNF518A (ENSSHBG00005020638) #33 CCNJ (ENSSHBG00005020634) #34 ENSSHBG00005020629 ENSSHBG00005020619 BTAF1 (ENSSHBG00005020606) #37 CPEB3 (ENSSHBG00005020592) MARCHF5 (ENSSHBG00005020584) IDE (ENSSHBG00005020513) KIF11 (ENSSHBG00005020449) ENSSHBG00005020418 EXOC6 (ENSSHBG00005020404) CYP26C1 (ENSSHBG00005020385) Golden eagle MODERN SPECIES 2 GOT1 (ENSACCG00020001316) ENSACCG00020001328 NKX2-3 (ENSACCG00020001343) SLC25A28 (ENSACCG00020001364) ENTPD7 (ENSACCG00020001384) ATP6V0E2 (ENSACCG00020001403) COX15 (ENSACCG00020001426) CUTC (ENSACCG00020001448) ENSACCG00020002084 DNMBP (ENSACCG00020002424) CPN1 (ENSACCG00020002478) ENTPD1 (ENSACCG00020002506) ENSACCG00020002536 #17 ADGRA1 (ENSACCG00020002556) #20 ENSACCG00020002690 #21 ENSACCG00020002760 #23 ENSACCG00020002774 #29 DNTT (ENSACCG00020002796) #30 BLNK (ENSACCG00020002879) #32 CCNJ (ENSACCG00020002946) #34 ENSACCG00020002968 #35 BTAF1 (ENSACCG00020003243) #37 CPEB3 (ENSACCG00020003454) MARCHF5 (ENSACCG00020003472) IDE (ENSACCG00020003512) KIF11 (ENSACCG00020003635) HHEX (ENSACCG00020003659) EXOC6 (ENSACCG00020003715) CYP26C1 (ENSACCG00020003823) CYP26A1 (ENSACCG00020003873) MYOF (ENSACCG00020004882) Passeriformes ANCESTRAL SPECIES 10 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000163757 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Passeriformes_g ANCESTRAL SPECIES 8 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00960000190513 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Passeroidea ANCESTRAL SPECIES 7 ENSGT00950000183082.b.b.b ENSGT00940000157556 ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00940000162476 ENSGT00390000002223 ENSGT00390000008454 ENSGT00940000164383 ENSGT00950000183088.a.b.a ENSGT00940000158235 ENSGT01100000263542.C ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00960000190513 ENSGT00940000165097.b #23 ENSGT00940000165097.a #22 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000173803 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b Zebra finch MODERN SPECIES 28 GOT1 (ENSTGUG00000009418) NKX2-3 (ENSTGUG00000009415) SLC25A28 (ENSTGUG00000009410) ENTPD7 (ENSTGUG00000009398) ATP6V0E2 (ENSTGUG00000009386) COX15 (ENSTGUG00000009368) CUTC (ENSTGUG00000009354) ENSTGUG00000009186 DNMBP (ENSTGUG00000009180) CPN1 (ENSTGUG00000009169) ENTPD1 (ENSTGUG00000009148) ENSTGUG00000009131 #17 ADGRA1 (ENSTGUG00000009101) #20 KNDC1 (ENSTGUG00000009094) #21 ENSTGUG00000028139 ENSTGUG00000009093 #23 ENSTGUG00000028890 #22 ENSTGUG00000020085 #29 DNTT (ENSTGUG00000009071) #30 BLNK (ENSTGUG00000009065) #32 ZNF518A (ENSTGUG00000022696) #33 CCNJ (ENSTGUG00000009052) #34 ENSTGUG00000027411 #35 BTAF1 (ENSTGUG00000009009) #37 CPEB3 (ENSTGUG00000008988) IDE (ENSTGUG00000008951) KIF11 (ENSTGUG00000008927) MARCHF5 (ENSTGUG00000008982) HHEX (ENSTGUG00000008924) EXOC6 (ENSTGUG00000008869) CYP26C1 (ENSTGUG00000008860) Mammalia ANCESTRAL SPECIES 281 ENSGT00940000165097.a #22 ENSGT00940000165097.b #23 Platypus MODERN SPECIES 14 TCERG1L (ENSOANG00000028768) PPP2R2D (ENSOANG00000020812) BNIP3 (ENSOANG00000047658) JAKMIP3 (ENSOANG00000040987) DPYSL4 (ENSOANG00000012014) ENSOANG00000043295 STK32C (ENSOANG00000028820) PWWP2B (ENSOANG00000048527) INPP5A (ENSOANG00000047999) ENSOANG00000045525 ENSOANG00000030741 #16 ENSOANG00000031751 #16 ENSOANG00000037554 #20 KNDC1 (ENSOANG00000043430) #21 ENSOANG00000045576 #22 ENSOANG00000038955 #23 ENSOANG00000043873 TUBGCP2 (ENSOANG00000038079) ENSOANG00000007714 ENSOANG00000039545 ENSOANG00000039592 FUOM (ENSOANG00000042156) ECHS1 (ENSOANG00000002523) PAOX (ENSOANG00000036296) MTG1 (ENSOANG00000011497) SPRN (ENSOANG00000038663) ENSOANG00000014311 ENSOANG00000010942 ENSOANG00000010019 ENSOANG00000012861 ENSOANG00000014229 Anura ANCESTRAL SPECIES 25 ENSGT00940000156696.B ENSGT00940000157732 ENSGT00390000000909 #8 ENSGT00940000156184 #9 ENSGT00940000168158 ENSGT00940000163514.C #10 ENSGT00390000018550 #11 ENSGT00940000155351 #12 ENSGT00940000163896 #13 ENSGT01030000234549.a.b #14 ENSGT00570000079216 #16 ENSGT00940000164278 #17 ENSGT00940000160175.b #20 ENSGT00390000011408 #21 ENSGT00940000165097.a.a #22 ENSGT00940000165097.b #23 ENSGT00940000165097.a.b #25 ENSGT00940000164759 #29 ENSGT00940000158584 #30 ENSGT00940000155715 #32 ENSGT00940000162006 #33 ENSGT00940000156981 #34 ENSGT00940000155847 #35 ENSGT00940000157500 #37 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780 ENSGT00940000155921 ENSGT00940000161748 ENSGT00390000005739.a.b ENSGT00800000124060.A.b Frog DUPLICATION Frog MODERN SPECIES 7 stn1 (ENSXETG00000011402) #8 slk (ENSXETG00000030054) #9 col17a1 (ENSXETG00000033563) #10 sfr1 (ENSXETG00000011407) #11 gsto2 (ENSXETG00000026602) #12 gsto1 (ENSXETG00000026601) #13 ENSXETG00000014777 #14 ENSXETG00000042597 #15 cfap46 (ENSXETG00000014784) #16 XB5799637 (ENSXETG00000026599) #17 ENSXETG00000037556 #18 ENSXETG00000046321 #19 ENSXETG00000014782 #20 kndc1 (ENSXETG00000008873) #21 ventx2.1 (ENSXETG00000026798) #22 ventx1.1 (ENSXETG00000034053) #23 ventx2.2 (ENSXETG00000026796) #24 ventx3.1 (ENSXETG00000032888) #25 ventx1.2 (ENSXETG00000008879) #26 ventx3.2 (ENSXETG00000033622) #27 ENSXETG00000042979 #28 XB5817455 [provisional:hs3st1] (ENSXETG00000008881) #29 dntt (ENSXETG00000038776) #30 ENSXETG00000047300 #31 blnk (ENSXETG00000012184) #32 znf518a (ENSXETG00000012185) #33 ccnj (ENSXETG00000048983) #34 dusp11.2 (ENSXETG00000012187) #35 ENSXETG00000043700 #36 btaf1 (ENSXETG00000012188) #37 cpeb3 (ENSXETG00000012190) Frog MODERN SPECIES 7 marchf5 (ENSXETG00000038834) ENSXETG00000042407 ##7 ENSXETG00000044591 ##7 cpeb3 (ENSXETG00000012190) btaf1 (ENSXETG00000012188) #37 ENSXETG00000043700 #36 dusp11.2 (ENSXETG00000012187) #35 ccnj (ENSXETG00000048983) #34 znf518a (ENSXETG00000012185) #33 blnk (ENSXETG00000012184) #32 ENSXETG00000047300 #31 dntt (ENSXETG00000038776) #30 XB5817455 [provisional:hs3st1] (ENSXETG00000008881) #29 ENSXETG00000042979 #28 ventx3.2 (ENSXETG00000033622) #27 ventx1.2 (ENSXETG00000008879) #26 ventx3.1 (ENSXETG00000032888) #25 ventx2.2 (ENSXETG00000026796) #24 ventx1.1 (ENSXETG00000034053) #23 ventx2.1 (ENSXETG00000026798) #22 kndc1 (ENSXETG00000008873) #21 ENSXETG00000014782 #20 ENSXETG00000046321 #19 ENSXETG00000037556 #18 XB5799637 (ENSXETG00000026599) #17 cfap46 (ENSXETG00000014784) #16 ENSXETG00000042597 #15 ENSXETG00000014777 #14 gsto1 (ENSXETG00000026601) #13 gsto2 (ENSXETG00000026602) #12 sfr1 (ENSXETG00000011407) #11