Amniota	ANCESTRAL SPECIES	1	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000177852	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Mammalia	ANCESTRAL SPECIES	38	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Theria	ANCESTRAL SPECIES	35	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Glires	ANCESTRAL SPECIES	13	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Kangaroo rat	MODERN SPECIES	339	ENSDORG00000009773 #7	ENSDORG00000009772 #8	Fkbp1b (ENSDORG00000025103) #9	Wdcp (ENSDORG00000009768) #10	Mfsd2b (ENSDORG00000015943) #11	Ubxn2a (ENSDORG00000025740) #12	ENSDORG00000027743 #13	Klhl29 (ENSDORG00000012917) #14	Apob (ENSDORG00000028395) #15	Ldah (ENSDORG00000010281) #16	Gdf7 (ENSDORG00000010280) #17	Hs1bp3 (ENSDORG00000005361) #18	Rhob (ENSDORG00000016173) #19	ENSDORG00000027569 #20	Pum2 (ENSDORG00000011453) #21	Sdc1 (ENSDORG00000014605) #22	Laptm4a (ENSDORG00000014089) #23	Matn3 (ENSDORG00000014087) #24	Wdr35 (ENSDORG00000014086) #25	Ttc32 (ENSDORG00000029568) #26	Osr1 (ENSDORG00000000798) #27	Nt5c1b (ENSDORG00000012516) #28	Rdh14 (ENSDORG00000019712) #29	Kcns3 (ENSDORG00000024097) #30	Msgn1 (ENSDORG00000003509) #31	Gen1 (ENSDORG00000010754) #32	Smc6 (ENSDORG00000010753) #33	Vsnl1 (ENSDORG00000024043) #34	ENSDORG00000026713 #35	Cyria (ENSDORG00000010274) #36	Mycn (ENSDORG00000009906) #37
Myomorpha	ANCESTRAL SPECIES	24	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Muroidea	ANCESTRAL SPECIES	21	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Muroidea_A	ANCESTRAL SPECIES	24	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Cricetidae	ANCESTRAL SPECIES	24	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000017067	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Chinese hamster chok1gshd	MODERN SPECIES	229	Wdcp (ENSCGRG00001019012) #10	Mfsd2b (ENSCGRG00001024664) #11	Ubxn2a (ENSCGRG00001007449) #12	Atad2b (ENSCGRG00001016996) #13	ENSCGRG00001012412	Klhl29 (ENSCGRG00001018377) #14	ENSCGRG00001024957	ENSCGRG00001024983	Apob (ENSCGRG00001009990) #15	Gdf7 (ENSCGRG00001002115) #17	ENSCGRG00001012418 #16	Hs1bp3 (ENSCGRG00001015945) #18	Rhob (ENSCGRG00001001843) #19	Slc7a15 (ENSCGRG00001018113) ##20	Pum2 (ENSCGRG00001025023) #21	SDC1 (ENSCGRG00001018173) #22	Laptm4a (ENSCGRG00001021474) #23	Matn3 (ENSCGRG00001025049) #24	Wdr35 (ENSCGRG00001004220) #25	Ttc32 (ENSCGRG00001007763) #26	Osr1 (ENSCGRG00001009653) #27	Nt5c1b (ENSCGRG00001016775) #28	Rdh14 (ENSCGRG00001024177) #29	ENSCGRG00001006912	Kcns3 (ENSCGRG00001004289) #30	Msgn1 (ENSCGRG00001003369) #31	ENSCGRG00001019699 #32	Smc6 (ENSCGRG00001024287) #33	Vsnl1 (ENSCGRG00001017035) #34	ENSCGRG00001012128	Cyria (ENSCGRG00001014064) #36
Golden Hamster	MODERN SPECIES	705	Fam228a (ENSMAUG00000019010)	Fam228b (ENSMAUG00000017259)	ENSMAUG00000004078 #7	ENSMAUG00000000586 #8	Fkbp1b (ENSMAUG00000016519) #9	Wdcp (ENSMAUG00000013564) #10	Ubxn2a (ENSMAUG00000013894) #12	ENSMAUG00000016676 #13	Klhl29 (ENSMAUG00000015607) #14	Apob (ENSMAUG00000010835) #15	Gdf7 (ENSMAUG00000011905) #17	Hs1bp3 (ENSMAUG00000010929) #18	Rhob (ENSMAUG00000016245) #19	Slc7a15 (ENSMAUG00000008328) ##20	Pum2 (ENSMAUG00000000311) #21	Sdc1 (ENSMAUG00000007825) #22	Laptm4a (ENSMAUG00000002092) #23	Matn3 (ENSMAUG00000000731) #24	Wdr35 (ENSMAUG00000017485) #25	Ttc32 (ENSMAUG00000018447) #26	Osr1 (ENSMAUG00000008188) #27	Nt5c1b (ENSMAUG00000018395) #28	Rdh14 (ENSMAUG00000016192) #29	Kcns3 (ENSMAUG00000017875) #30	Msgn1 (ENSMAUG00000016000) #31	Smc6 (ENSMAUG00000016007) #33	Vsnl1 (ENSMAUG00000014300) #34	Rad51ap2 (ENSMAUG00000015167)	ENSMAUG00000000527	Cyria (ENSMAUG00000000089) #36	Mycn (ENSMAUG00000017079) #37
Cricetidae_B	ANCESTRAL SPECIES	43	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Prairie vole	MODERN SPECIES	353	Wdcp (ENSMOCG00000013612) #10	Mfsd2b (ENSMOCG00000012318) #11	Ubxn2a (ENSMOCG00000020669) #12	Atad2b (ENSMOCG00000000408) #13	Klhl29 (ENSMOCG00000007430) #14	ENSMOCG00000012724	ENSMOCG00000013271	ENSMOCG00000002216	Apob (ENSMOCG00000021753) #15	Gdf7 (ENSMOCG00000010905) #17	ENSMOCG00000021323	Hs1bp3 (ENSMOCG00000022226) #18	Rhob (ENSMOCG00000007966) #19	Slc7a15 (ENSMOCG00000003687) ##20	Pum2 (ENSMOCG00000013663) #21	Sdc1 (ENSMOCG00000019532) #22	ENSMOCG00000012688	Laptm4a (ENSMOCG00000013181) #23	Matn3 (ENSMOCG00000013872) #24	Wdr35 (ENSMOCG00000001393) #25	Ttc32 (ENSMOCG00000021911) #26	ENSMOCG00000007598	Osr1 (ENSMOCG00000012793) #27	ENSMOCG00000013225	Nt5c1b (ENSMOCG00000020580) #28	Rdh14 (ENSMOCG00000005865) #29	Kcns3 (ENSMOCG00000007505) #30	Tacstd2 (ENSMOCG00000008197)	Il23r (ENSMOCG00000010821)	Il12rb2 (ENSMOCG00000022701)	Serbp1 (ENSMOCG00000015573)
Northern American deer mouse	MODERN SPECIES	14	Fkbp1b (ENSPEMG00000028047) #9	Wdcp (ENSPEMG00000011326) #10	Mfsd2b (ENSPEMG00000014144) #11	ENSPEMG00000017582 #12	Atad2b (ENSPEMG00000010515) #13	ENSPEMG00000025296	Klhl29 (ENSPEMG00000012938) #14	ENSPEMG00000029395	Apob (ENSPEMG00000018913) #15	ENSPEMG00000019039 #16	Hs1bp3 (ENSPEMG00000001400) #18	Rhob (ENSPEMG00000013485) #19	Slc7a15 (ENSPEMG00000009942) ##20	Pum2 (ENSPEMG00000008357) #21	ENSPEMG00000024635	Sdc1 (ENSPEMG00000010998) #22	Laptm4a (ENSPEMG00000015789) #23	Matn3 (ENSPEMG00000017106) #24	Wdr35 (ENSPEMG00000004790) #25	Ttc32 (ENSPEMG00000027871) #26	Osr1 (ENSPEMG00000008344) #27	Nt5c1b (ENSPEMG00000013187) #28	Rdh14 (ENSPEMG00000018416) #29	ENSPEMG00000000184	ENSPEMG00000025389	Kcns3 (ENSPEMG00000011462) #30	ENSPEMG00000007987	Msgn1 (ENSPEMG00000007522) #31	Gen1 (ENSPEMG00000001855) #32	ENSPEMG00000024461 #33	Vsnl1 (ENSPEMG00000028838) #34
Murinae	ANCESTRAL SPECIES	8	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Mus	ANCESTRAL SPECIES	10	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Mus_A	ANCESTRAL SPECIES	17	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Mus_B	ANCESTRAL SPECIES	17	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Mouse	MODERN SPECIES	3	Pfn4 (ENSMUSG00000020639)	Sf3b6 (ENSMUSG00000037361) #8	Fkbp1b (ENSMUSG00000020635) #9	Wdcp (ENSMUSG00000051721) #10	Mfsd2b (ENSMUSG00000037336) #11	Ubxn2a (ENSMUSG00000020634) #12	Atad2b (ENSMUSG00000052812) #13	Klhl29 (ENSMUSG00000020627) #14	Apob (ENSMUSG00000020609) #15	Ldah (ENSMUSG00000037669) #16	Gdf7 (ENSMUSG00000037660) #17	Hs1bp3 (ENSMUSG00000020605) #18	Rhob (ENSMUSG00000054364) #19	Slc7a15 (ENSMUSG00000020600) ##20	Pum2 (ENSMUSG00000020594) #21	Sdc1 (ENSMUSG00000020592) #22	Laptm4a (ENSMUSG00000020585) #23	Matn3 (ENSMUSG00000020583) #24	Wdr35 (ENSMUSG00000066643) #25	Ttc32 (ENSMUSG00000066637) #26	Osr1 (ENSMUSG00000048387) #27	Nt5c1b (ENSMUSG00000020622) #28	Rdh14 (ENSMUSG00000020621) #29	Kcns3 (ENSMUSG00000043673) #30	Msgn1 (ENSMUSG00000047002) #31	Gen1 (ENSMUSG00000051235) #32	Smc6 (ENSMUSG00000020608) #33	Vsnl1 (ENSMUSG00000054459) #34	Rad51ap2 (ENSMUSG00000086022)	Cyria (ENSMUSG00000020589) #36	Mycn (ENSMUSG00000037169) #37
Mus_C	ANCESTRAL SPECIES	11	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.bb.a #37
Steppe mouse	MODERN SPECIES	68															Pum2 (ENSMSIG00000004171) #21	Sdc1 (ENSMSIG00000004134) #22	ENSMSIG00000004066 #23	Matn3 (ENSMSIG00000004029) #24	Wdr35 (ENSMSIG00000003728) #25	Ttc32 (ENSMSIG00000003695) #26	ENSMSIG00000003661
spretus	MODERN SPECIES	3	Pfn4 (MGP_SPRETEiJ_G0018433)	Sf3b6 (MGP_SPRETEiJ_G0018434) #8	Fkbp1b (MGP_SPRETEiJ_G0018435) #9	Wdcp (MGP_SPRETEiJ_G0018436) #10	Mfsd2b (MGP_SPRETEiJ_G0018437) #11	Ubxn2a (MGP_SPRETEiJ_G0018438) #12	Atad2b (MGP_SPRETEiJ_G0018439) #13	Klhl29 (MGP_SPRETEiJ_G0018440) #14	Apob (MGP_SPRETEiJ_G0018441) #15	Ldah (MGP_SPRETEiJ_G0018442) #16	Gdf7 (MGP_SPRETEiJ_G0018443) #17	Hs1bp3 (MGP_SPRETEiJ_G0018444) #18	Rhob (MGP_SPRETEiJ_G0018445) #19	Slc7a15 (MGP_SPRETEiJ_G0018446) ##20	Pum2 (MGP_SPRETEiJ_G0018447) #21	Sdc1 (MGP_SPRETEiJ_G0018448) #22	MGP_SPRETEiJ_G0018449 #23	Matn3 (MGP_SPRETEiJ_G0018450) #24	Wdr35 (MGP_SPRETEiJ_G0018451) #25	Ttc32 (MGP_SPRETEiJ_G0018452) #26	Osr1 (MGP_SPRETEiJ_G0018453) #27	Nt5c1b (MGP_SPRETEiJ_G0018454) #28	Rdh14 (MGP_SPRETEiJ_G0018455) #29	Kcns3 (MGP_SPRETEiJ_G0018456) #30	Msgn1 (MGP_SPRETEiJ_G0018457) #31	Gen1 (MGP_SPRETEiJ_G0018458) #32	Smc6 (MGP_SPRETEiJ_G0018459) #33	Vsnl1 (MGP_SPRETEiJ_G0018460) #34	Rad51ap2 (MGP_SPRETEiJ_G0018461)	Cyria (MGP_SPRETEiJ_G0018462) #36	Mycn (MGP_SPRETEiJ_G0018463) #37
Ryukyu mouse	MODERN SPECIES	3	Pfn4 (MGP_CAROLIEiJ_G0017589)	Sf3b6 (MGP_CAROLIEiJ_G0017590) #8	Fkbp1b (MGP_CAROLIEiJ_G0017591) #9	Wdcp (MGP_CAROLIEiJ_G0017592) #10	Mfsd2b (MGP_CAROLIEiJ_G0017593) #11	MGP_CAROLIEiJ_G0017594 #12	MGP_CAROLIEiJ_G0017595 #13	Klhl29 (MGP_CAROLIEiJ_G0017596) #14	Apob (MGP_CAROLIEiJ_G0017597) #15	Ldah (MGP_CAROLIEiJ_G0017598) #16	Gdf7 (MGP_CAROLIEiJ_G0017599) #17	Hs1bp3 (MGP_CAROLIEiJ_G0017600) #18	Rhob (MGP_CAROLIEiJ_G0017601) #19	Slc7a15 (MGP_CAROLIEiJ_G0017602) ##20	Pum2 (MGP_CAROLIEiJ_G0017603) #21	Sdc1 (MGP_CAROLIEiJ_G0017604) #22	MGP_CAROLIEiJ_G0017605 #23	Matn3 (MGP_CAROLIEiJ_G0017606) #24	Wdr35 (MGP_CAROLIEiJ_G0017607) #25	Ttc32 (MGP_CAROLIEiJ_G0017608) #26	Osr1 (MGP_CAROLIEiJ_G0017609) #27	Nt5c1b (MGP_CAROLIEiJ_G0017610) #28	Rdh14 (MGP_CAROLIEiJ_G0017611) #29	Kcns3 (MGP_CAROLIEiJ_G0017612) #30	Vmn1r200 (MGP_CAROLIEiJ_G0017613)	MGP_CAROLIEiJ_G0017614	Msgn1 (MGP_CAROLIEiJ_G0017615) #31	Gen1 (MGP_CAROLIEiJ_G0017616) #32	Smc6 (MGP_CAROLIEiJ_G0017617) #33	Vsnl1 (MGP_CAROLIEiJ_G0017618) #34	Rad51ap2 (MGP_CAROLIEiJ_G0017619)
Shrew mouse	MODERN SPECIES	20	Pfn4 (MGP_PahariEiJ_G0029347)	Sf3b6 (MGP_PahariEiJ_G0029348) #8	Fkbp1b (MGP_PahariEiJ_G0029349) #9	Wdcp (MGP_PahariEiJ_G0029350) #10	Mfsd2b (MGP_PahariEiJ_G0029351) #11	Ubxn2a (MGP_PahariEiJ_G0029352) #12	Atad2b (MGP_PahariEiJ_G0029353) #13	Klhl29 (MGP_PahariEiJ_G0029354) #14	Apob (MGP_PahariEiJ_G0029355) #15	Ldah (MGP_PahariEiJ_G0029356) #16	Gdf7 (MGP_PahariEiJ_G0029357) #17	Hs1bp3 (MGP_PahariEiJ_G0029358) #18	Rhob (MGP_PahariEiJ_G0029359) #19	Slc7a15 (MGP_PahariEiJ_G0029360) ##20	Pum2 (MGP_PahariEiJ_G0029361) #21	Sdc1 (MGP_PahariEiJ_G0029362) #22	MGP_PahariEiJ_G0029363 #23	Matn3 (MGP_PahariEiJ_G0029364) #24	Wdr35 (MGP_PahariEiJ_G0029365) #25	Ttc32 (MGP_PahariEiJ_G0029366) #26	Osr1 (MGP_PahariEiJ_G0029367) #27	Nt5c1b (MGP_PahariEiJ_G0029368) #28	Rdh14 (MGP_PahariEiJ_G0029369) #29	Kcns3 (MGP_PahariEiJ_G0029370) #30	Msgn1 (MGP_PahariEiJ_G0029371) #31	Gen1 (MGP_PahariEiJ_G0029372) #32	Smc6 (MGP_PahariEiJ_G0029373) #33	Vsnl1 (MGP_PahariEiJ_G0029374) #34	Rad51ap2 (MGP_PahariEiJ_G0029375)	Cyria (MGP_PahariEiJ_G0029376) #36	Mycn (MGP_PahariEiJ_G0029377) #37
Rat	MODERN SPECIES	16	Sf3b6 (ENSRNOG00000046172) #8	Fkbp1b (ENSRNOG00000047143) #9	Wdcp (ENSRNOG00000049989) #10	Mfsd2b (ENSRNOG00000023508) #11	Ubxn2a (ENSRNOG00000068687) #12	Atad2b (ENSRNOG00000058973) #13	Klhl29 (ENSRNOG00000005371) #14	ENSRNOG00000069218	Tdrd15 (ENSRNOG00000060052)	Apob (ENSRNOG00000005542) #15	Ldah (ENSRNOG00000021475) #16	Gdf7 (ENSRNOG00000006046) #17	Hs1bp3 (ENSRNOG00000006062) #18	Slc7a15 (ENSRNOG00000006119) ##20	Pum2 (ENSRNOG00000006180) #21	Sdc1 (ENSRNOG00000059947) #22	Laptm4a (ENSRNOG00000006865) #23	Matn3 (ENSRNOG00000056141) #24	Wdr35 (ENSRNOG00000028783) #25	Ttc32 (ENSRNOG00000049088) #26	Osr1 (ENSRNOG00000004210) #27	Nt5c1b (ENSRNOG00000004296) #28	Rdh14 (ENSRNOG00000039551) #29	Kcns3 (ENSRNOG00000004899) #30	Msgn1 (ENSRNOG00000028518) #31	Gen1 (ENSRNOG00000004667) #32	Smc6 (ENSRNOG00000004908) #33	Vsnl1 (ENSRNOG00000005345) #34	Rad51ap2 (ENSRNOG00000049271)	AABR07072562.1 (ENSRNOG00000050653)	Cyria (ENSRNOG00000052758) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1858														ENSNGAG00000015046	ENSNGAG00000016665 #21	Sdc1 (ENSNGAG00000010323) #22	Laptm4a (ENSNGAG00000019118) #23	Matn3 (ENSNGAG00000000368) #24	Wdr35 (ENSNGAG00000020320) #25	Ttc32 (ENSNGAG00000011876) #26	Osr1 (ENSNGAG00000009668) #27	Nt5c1b (ENSNGAG00000014021) #28	Rdh14 (ENSNGAG00000001843) #29	ENSNGAG00000015754	Kcns3 (ENSNGAG00000015414) #30	Msgn1 (ENSNGAG00000014536) #31	Smc6 (ENSNGAG00000018825) #33	Vsnl1 (ENSNGAG00000012638) #34
Lesser Egyptian jerboa	MODERN SPECIES	106	Ubxn2a (ENSJJAG00000016225) #12	ENSJJAG00000017291 #13	ENSJJAG00000018968	ENSJJAG00000022603	ENSJJAG00000014110	Klhl29 (ENSJJAG00000023008) #14	ENSJJAG00000003145	ENSJJAG00000004727 #15	ENSJJAG00000007009 #15	Ldah (ENSJJAG00000015888) #16	Gdf7 (ENSJJAG00000016441) #17	ENSJJAG00000017439 #18	Rhob (ENSJJAG00000013877) #19	ENSJJAG00000017909	Pum2 (ENSJJAG00000020969) #21	Sdc1 (ENSJJAG00000021653) #22	Laptm4a (ENSJJAG00000000101) #23	Matn3 (ENSJJAG00000000252) #24	Wdr35 (ENSJJAG00000016508) #25	Ttc32 (ENSJJAG00000022107) #26	ENSJJAG00000014132	Osr1 (ENSJJAG00000022508) #27	Nt5c1b (ENSJJAG00000021950) #28	Rdh14 (ENSJJAG00000023561) #29	Kcns3 (ENSJJAG00000001486) #30	Msgn1 (ENSJJAG00000006273) #31	Smc6 (ENSJJAG00000010160) #33	Vsnl1 (ENSJJAG00000011824) #34	ENSJJAG00000014268	ENSJJAG00000013620	Cyria (ENSJJAG00000007480) #36
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.cb ##37
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.h.a ##11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Hystricomorpha_a	ANCESTRAL SPECIES	31	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Guinea pig	MODERN SPECIES	18	FAM228B (ENSCPOG00000030306)	PFN4 (ENSCPOG00000009683)	SF3B6 (ENSCPOG00000008016) #8	FKBP1B (ENSCPOG00000039379) #9	WDCP (ENSCPOG00000019263) #10	MFSD2B (ENSCPOG00000022662) ##11	UBXN2A (ENSCPOG00000038294) #12	ATAD2B (ENSCPOG00000014176) #13	KLHL29 (ENSCPOG00000014174) #14	APOB (ENSCPOG00000004931) #15	LDAH (ENSCPOG00000012586) #16	HS1BP3 (ENSCPOG00000000278) #18	ENSCPOG00000037907 ##20	PUM2 (ENSCPOG00000031996) #21	ENSCPOG00000007075	SDC1 (ENSCPOG00000008875) #22	LAPTM4A (ENSCPOG00000009690) #23	MATN3 (ENSCPOG00000004739) #24	WDR35 (ENSCPOG00000007053) #25	TTC32 (ENSCPOG00000033658) #26	OSR1 (ENSCPOG00000002025) #27	NT5C1B (ENSCPOG00000012761) #28	RDH14 (ENSCPOG00000022651) #29	KCNS3 (ENSCPOG00000009232) #30	MSGN1 (ENSCPOG00000003061) #31	GEN1 (ENSCPOG00000033894) #32	SMC6 (ENSCPOG00000014752) #33	VSNL1 (ENSCPOG00000030283) #34
Hystricomorpha_b	ANCESTRAL SPECIES	26	ENSGT00390000017067	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Long-tailed chinchilla	MODERN SPECIES	176	FAM228B (ENSCLAG00000004984)	PFN4 (ENSCLAG00000004618)	SF3B6 (ENSCLAG00000014512) #8	FKBP1B (ENSCLAG00000011181) #9	WDCP (ENSCLAG00000008275) #10	MFSD2B (ENSCLAG00000014189) #11	UBXN2A (ENSCLAG00000014610) #12	ATAD2B (ENSCLAG00000005215) #13	KLHL29 (ENSCLAG00000005598) #14	APOB (ENSCLAG00000008056) #15	LDAH (ENSCLAG00000011308) #16	HS1BP3 (ENSCLAG00000008832) #18	RHOB (ENSCLAG00000017801) #19	ENSCLAG00000005814 ##20	PUM2 (ENSCLAG00000006048) #21	SDC1 (ENSCLAG00000007345) #22	LAPTM4A (ENSCLAG00000006983) #23	MATN3 (ENSCLAG00000006019) #24	WDR35 (ENSCLAG00000007929) #25	TTC32 (ENSCLAG00000009839) #26	OSR1 (ENSCLAG00000009423) #27	NT5C1B (ENSCLAG00000008659) #28	RDH14 (ENSCLAG00000009341) #29	KCNS3 (ENSCLAG00000013937) #30	MSGN1 (ENSCLAG00000015119) #31	GEN1 (ENSCLAG00000008865) #32	SMC6 (ENSCLAG00000012919) #33	VSNL1 (ENSCLAG00000011222) #34	ENSCLAG00000013272
Degu	MODERN SPECIES	60	ENSODEG00000009834 #13	ENSODEG00000008786	KLHL29 (ENSODEG00000009928) #14	ENSODEG00000007428	ENSODEG00000019450	ENSODEG00000007994	ENSODEG00000019494	APOB (ENSODEG00000008337) #15	ENSODEG00000008523 #16	GDF7 (ENSODEG00000008847) #17	HS1BP3 (ENSODEG00000010003) #18	RHOB (ENSODEG00000019841) #19	ENSODEG00000010362 ##20	PUM2 (ENSODEG00000007823) #21	ENSODEG00000008774	SDC1 (ENSODEG00000010758) #22	LAPTM4A (ENSODEG00000008579) #23	MATN3 (ENSODEG00000008451) #24	WDR35 (ENSODEG00000012693) #25	TTC32 (ENSODEG00000009280) #26	OSR1 (ENSODEG00000008728) #27	NT5C1B (ENSODEG00000008929) #28	RDH14 (ENSODEG00000008458) #29	KCNS3 (ENSODEG00000009066) #30	ENSODEG00000019755	MSGN1 (ENSODEG00000009615) #31	GEN1 (ENSODEG00000010156) #32	SMC6 (ENSODEG00000008987) #33	VSNL1 (ENSODEG00000008555) #34	ENSODEG00000008159	SLC10A4 (ENSODEG00000010331)
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.cb ##37
Marmotini	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a.u.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.cb ##37
Marmotini_b	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.g #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a.u.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.cb ##37
Squirrel	MODERN SPECIES	93	WDCP (ENSSTOG00000032257) #10	MFSD2B (ENSSTOG00000003123) #11	UBXN2A (ENSSTOG00000030412) #12	ATAD2B (ENSSTOG00000021066) #13	KLHL29 (ENSSTOG00000008403) #14	ENSSTOG00000033132 #23	TDRD15 (ENSSTOG00000027567)	APOB (ENSSTOG00000027598) #15	LDAH (ENSSTOG00000026882) #16	GDF7 (ENSSTOG00000027110) #17	HS1BP3 (ENSSTOG00000004973) #18	ENSSTOG00000014644 #19	ENSSTOG00000023326 ##20	PUM2 (ENSSTOG00000006262) #21	ENSSTOG00000033291	SDC1 (ENSSTOG00000028519) #22	ENSSTOG00000007214 #23	MATN3 (ENSSTOG00000019530) #24	WDR35 (ENSSTOG00000007151) #25	TTC32 (ENSSTOG00000007140) #26	OSR1 (ENSSTOG00000015454) #27	NT5C1B (ENSSTOG00000014834) #28	RDH14 (ENSSTOG00000021114) #29	KCNS3 (ENSSTOG00000012420) #30	MSGN1 (ENSSTOG00000013981) #31	GEN1 (ENSSTOG00000013963) #32	SMC6 (ENSSTOG00000013946) #33	VSNL1 (ENSSTOG00000010438) #34	ENSSTOG00000025212	CYRIA (ENSSTOG00000022187) #36	MYCN (ENSSTOG00000012252) ##37
Arctic ground squirrel	MODERN SPECIES		UBXN2A (ENSUPAG00010008734) #12	ATAD2B (ENSUPAG00010008759) #13	KLHL29 (ENSUPAG00010008812) #14	ENSUPAG00010008883	TDRD15 (ENSUPAG00010008953)	APOB (ENSUPAG00010008961) #15	LDAH (ENSUPAG00010009007) #16	ENSUPAG00010009042 #17	ENSUPAG00010009055 #17	HS1BP3 (ENSUPAG00010009063) #18	RHOB (ENSUPAG00010009084) #19	ENSUPAG00010009092 ##20	PUM2 (ENSUPAG00010009123) #21	ENSUPAG00010009301	ENSUPAG00010009303	SDC1 (ENSUPAG00010009310) #22	LAPTM4A (ENSUPAG00010009333) #23	MATN3 (ENSUPAG00010009339) #24	WDR35 (ENSUPAG00010009354) #25	TTC32 (ENSUPAG00010009436) #26	OSR1 (ENSUPAG00010009451) #27	ENSUPAG00010009474 #28	RDH14 (ENSUPAG00010009546) #29	MSGN1 (ENSUPAG00010009556) #31	GEN1 (ENSUPAG00010009557) #32	SMC6 (ENSUPAG00010009564) #33	VSNL1 (ENSUPAG00010009655) #34	RAD51AP2 (ENSUPAG00010009663)	CYRIA (ENSUPAG00010009668) #36	MYCN (ENSUPAG00010009702) ##37	ENSUPAG00010009708
Alpin marmot	MODERN SPECIES	6	FKBP1B (ENSMMMG00000021830) #9	WDCP (ENSMMMG00000021855) #10	MFSD2B (ENSMMMG00000021873) #11	ENSMMMG00000021893	ATAD2B (ENSMMMG00000021898) #13	KLHL29 (ENSMMMG00000022005) #14	TDRD15 (ENSMMMG00000022048)	ENSMMMG00000022049 #15	ENSMMMG00000022059 #15	LDAH (ENSMMMG00000022060) #16	HS1BP3 (ENSMMMG00000022083) #18	RHOB (ENSMMMG00000022086) #19	ENSMMMG00000022089 ##20	PUM2 (ENSMMMG00000022116) #21	ENSMMMG00000022129	SDC1 (ENSMMMG00000022131) #22	LAPTM4A (ENSMMMG00000022160) #23	MATN3 (ENSMMMG00000022186) #24	WDR35 (ENSMMMG00000022195) #25	TTC32 (ENSMMMG00000022212) #26	OSR1 (ENSMMMG00000022239) #27	ENSMMMG00000022251 #28	RDH14 (ENSMMMG00000022280) #29	KCNS3 (ENSMMMG00000022292) #30	MSGN1 (ENSMMMG00000022303) #31	GEN1 (ENSMMMG00000022304) #32	SMC6 (ENSMMMG00000022309) #33	VSNL1 (ENSMMMG00000022330) #34	RAD51AP2 (ENSMMMG00000022347)	CYRIA (ENSMMMG00000022371) #36	ENSMMMG00000022385 ##37
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005023387 #8	FKBP1B (ENSSVLG00005023436) #9	WDCP (ENSSVLG00005023512) #10	MFSD2B (ENSSVLG00005023554) #11	ENSSVLG00005023695 #12	ATAD2B (ENSSVLG00005023756) #13	KLHL29 (ENSSVLG00005023916) #14	TDRD15 (ENSSVLG00005023954)	APOB (ENSSVLG00005023994) #15	LDAH (ENSSVLG00005024216) #16	GDF7 (ENSSVLG00005024288) #17	HS1BP3 (ENSSVLG00005024304) #18	RHOB (ENSSVLG00005024328) #19	ENSSVLG00005024370 ##20	ENSSVLG00005024506 #21	SDC1 (ENSSVLG00005024647) #22	LAPTM4A (ENSSVLG00005024670) #23	MATN3 (ENSSVLG00005024711) #24	WDR35 (ENSSVLG00005024826) #25	TTC32 (ENSSVLG00005024889) #26	OSR1 (ENSSVLG00005024914) #27	NT5C1B (ENSSVLG00005025002) #28	RDH14 (ENSSVLG00005025062) #29	ENSSVLG00005025079	KCNS3 (ENSSVLG00005025089) #30	MSGN1 (ENSSVLG00005025107) #31	GEN1 (ENSSVLG00005025123) #32	SMC6 (ENSSVLG00005025164) #33	VSNL1 (ENSSVLG00005025182) #34	RAD51AP2 (ENSSVLG00005025196)	ENSSVLG00005025209
Lagomorpha	ANCESTRAL SPECIES	75	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a.h.a ##11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Rabbit	MODERN SPECIES	11	FKBP1B (ENSOCUG00000037720) #9	WDCP (ENSOCUG00000012562) #10	ENSOCUG00000008793 ##11	UBXN2A (ENSOCUG00000008783) #12	ATAD2B (ENSOCUG00000005723) #13	KLHL29 (ENSOCUG00000017372) #14	TDRD15 (ENSOCUG00000005346)	APOB (ENSOCUG00000005329) #15	LDAH (ENSOCUG00000015795) #16	GDF7 (ENSOCUG00000026956) #17	HS1BP3 (ENSOCUG00000015781) #18	RHOB (ENSOCUG00000032265) #19	ENSOCUG00000025149 ##20	PUM2 (ENSOCUG00000017908) #21	ENSOCUG00000032467	SDC1 (ENSOCUG00000025956) #22	LAPTM4A (ENSOCUG00000026699) #23	MATN3 (ENSOCUG00000021257) #24	WDR35 (ENSOCUG00000013185) #25	TTC32 (ENSOCUG00000003731) #26	ENSOCUG00000034308	OSR1 (ENSOCUG00000006091) #27	NT5C1B (ENSOCUG00000026238) #28	RDH14 (ENSOCUG00000025332) #29	KCNS3 (ENSOCUG00000007365) #30	MSGN1 (ENSOCUG00000000309) #31	GEN1 (ENSOCUG00000027255) #32	ENSOCUG00000034282 #33	ENSOCUG00000017307	VSNL1 (ENSOCUG00000026184) #34	RAD51AP2 (ENSOCUG00000027767)
Pika	MODERN SPECIES	432															PUM2 (ENSOPRG00000001963) #21	SDC1 (ENSOPRG00000001946) #22
Tree shrew	MODERN SPECIES	637														PUM2 (ENSTBEG00000008729) #21	ENSTBEG00000008106	SDC1 (ENSTBEG00000007662) #22
Primates	ANCESTRAL SPECIES	14	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000183424
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000183424
Lemuriformes	ANCESTRAL SPECIES	23	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000183424
Mouse lemur	MODERN SPECIES	30	FKBP1B (ENSMICG00000028839) #9	WDCP (ENSMICG00000001526) #10	MFSD2B (ENSMICG00000027625) #11	ENSMICG00000001508 #12	ENSMICG00000043253	ENSMICG00000030239	ATAD2B (ENSMICG00000003489) #13	KLHL29 (ENSMICG00000032037) #14	TDRD15 (ENSMICG00000026358)	APOB (ENSMICG00000011331) #15	LDAH (ENSMICG00000011319) #16	GDF7 (ENSMICG00000044629) #17	HS1BP3 (ENSMICG00000027064) #18	RHOB (ENSMICG00000029771) #19	PUM2 (ENSMICG00000011647) #21	SDC1 (ENSMICG00000041634) #22	LAPTM4A (ENSMICG00000031395) #23	MATN3 (ENSMICG00000032185) #24	WDR35 (ENSMICG00000037969) #25	ENSMICG00000041804 #26	OSR1 (ENSMICG00000004493) #27	NT5C1B (ENSMICG00000010847) #28	RDH14 (ENSMICG00000033814) #29	ENSMICG00000029479 #30	GEN1 (ENSMICG00000026479) #32	SMC6 (ENSMICG00000010802) #33	VSNL1 (ENSMICG00000036354) #34	RAD51AP2 (ENSMICG00000038023)	CYRIA (ENSMICG00000013924) #36	MYCN (ENSMICG00000013903) #37	DDX1 (ENSMICG00000001023)
Lemuriformes_a	ANCESTRAL SPECIES	10	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000183424
Coquerels sifaka	MODERN SPECIES	559									TDRD15 (ENSPCOG00000017764)	APOB (ENSPCOG00000021611) #15	LDAH (ENSPCOG00000014577) #16	GDF7 (ENSPCOG00000020938) #17	HS1BP3 (ENSPCOG00000016428) #18	RHOB (ENSPCOG00000004927) #19	PUM2 (ENSPCOG00000019636) #21	SDC1 (ENSPCOG00000024117) #22	LAPTM4A (ENSPCOG00000019008) #23	MATN3 (ENSPCOG00000020678) #24	TTC32 (ENSPCOG00000028173) #26	ENSPCOG00000015877	OSR1 (ENSPCOG00000024991) #27	NT5C1B (ENSPCOG00000000264) #28	RDH14 (ENSPCOG00000023642) #29	KCNS3 (ENSPCOG00000009392) #30	GEN1 (ENSPCOG00000022405) #32	SMC6 (ENSPCOG00000028541) #33	VSNL1 (ENSPCOG00000003780) #34	RAD51AP2 (ENSPCOG00000019163)	CYRIA (ENSPCOG00000021268) #36	MYCN (ENSPCOG00000013382) #37	DDX1 (ENSPCOG00000028185)
Greater bamboo lemur	MODERN SPECIES	339				ATAD2B (ENSPSMG00000006746) #13	ENSPSMG00000006754	KLHL29 (ENSPSMG00000006774) #14	ENSPSMG00000006781	TDRD15 (ENSPSMG00000006790)	APOB (ENSPSMG00000006849) #15	LDAH (ENSPSMG00000006874) #16	ENSPSMG00000006877	GDF7 (ENSPSMG00000006880) #17	HS1BP3 (ENSPSMG00000006908) #18	ENSPSMG00000006929	PUM2 (ENSPSMG00000007064) #21	SDC1 (ENSPSMG00000007157) #22	LAPTM4A (ENSPSMG00000007179) #23	MATN3 (ENSPSMG00000007217) #24	WDR35 (ENSPSMG00000007386) #25	TTC32 (ENSPSMG00000007425) #26	OSR1 (ENSPSMG00000007427) #27	NT5C1B (ENSPSMG00000007455) #28	RDH14 (ENSPSMG00000007468) #29	KCNS3 (ENSPSMG00000007502) #30	MSGN1 (ENSPSMG00000007507) #31	GEN1 (ENSPSMG00000007525) #32	SMC6 (ENSPSMG00000007622) #33	VSNL1 (ENSPSMG00000007643) #34	RAD51AP2 (ENSPSMG00000007652)	ENSPSMG00000007660	CYRIA (ENSPSMG00000007716) #36
Bushbaby	MODERN SPECIES	137	TP53I3 (ENSOGAG00000004470) #7	SF3B6 (ENSOGAG00000004468) #8	FKBP1B (ENSOGAG00000029092) #9	WDCP (ENSOGAG00000002596) #10	MFSD2B (ENSOGAG00000002595) #11	UBXN2A (ENSOGAG00000000025) #12	ATAD2B (ENSOGAG00000004574) #13	KLHL29 (ENSOGAG00000004572) #14	TDRD15 (ENSOGAG00000026095)	APOB (ENSOGAG00000015084) #15	LDAH (ENSOGAG00000000194) #16	GDF7 (ENSOGAG00000025229) #17	HS1BP3 (ENSOGAG00000000192) #18	RHOB (ENSOGAG00000034489) #19	PUM2 (ENSOGAG00000002187) #21	SDC1 (ENSOGAG00000010183) #22	LAPTM4A (ENSOGAG00000003002) #23	ENSOGAG00000029374	MATN3 (ENSOGAG00000002995) #24	WDR35 (ENSOGAG00000002991) #25	TTC32 (ENSOGAG00000002990) #26	OSR1 (ENSOGAG00000003047) #27	NT5C1B (ENSOGAG00000001728) #28	RDH14 (ENSOGAG00000027061) #29	KCNS3 (ENSOGAG00000007336) #30	MSGN1 (ENSOGAG00000012569) #31	GEN1 (ENSOGAG00000004816) #32	SMC6 (ENSOGAG00000004809) #33	VSNL1 (ENSOGAG00000030574) #34	ENSOGAG00000031508	CYRIA (ENSOGAG00000009218) #36
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000183424
Tarsier	MODERN SPECIES	4807															PUM2 (ENSTSYG00000014463) #21	SDC1 (ENSTSYG00000026443) #22
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000183424
Platyrrhini	ANCESTRAL SPECIES	45	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905.n.a #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Mas night monkey	MODERN SPECIES	950	WDCP (ENSANAG00000025318) #10	MFSD2B (ENSANAG00000035631) #11	UBXN2A (ENSANAG00000031177) #12	ATAD2B (ENSANAG00000024449) #13	KLHL29 (ENSANAG00000035261) #14	ENSANAG00000008532	TDRD15 (ENSANAG00000026523)	APOB (ENSANAG00000032282) #15	ENSANAG00000031943	LDAH (ENSANAG00000022004) #16	GDF7 (ENSANAG00000035417) #17	HS1BP3 (ENSANAG00000028913) #18	RHOB (ENSANAG00000018114) #19	PUM2 (ENSANAG00000021807) #21	ENSANAG00000019275	SDC1 (ENSANAG00000032410) #22
Cebidae	ANCESTRAL SPECIES	40	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905.n.a #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Marmoset	MODERN SPECIES	5	MFSD2B (ENSCJAG00000007691) #11	UBXN2A (ENSCJAG00000007665) #12	ATAD2B (ENSCJAG00000007628) #13	KLHL29 (ENSCJAG00000007588) #14	ENSCJAG00000062913	TDRD15 (ENSCJAG00000007582)	ENSCJAG00000043360	APOB (ENSCJAG00000007533) #15	LDAH (ENSCJAG00000007531) #16	GDF7 (ENSCJAG00000007529) #17	HS1BP3 (ENSCJAG00000007517) #18	ENSCJAG00000022935	RHOB (ENSCJAG00000077207) #19	ENSCJAG00000086921	PUM2 (ENSCJAG00000007450) #21	SDC1 (ENSCJAG00000039283) #22	ENSCJAG00000071467 #23	MATN3 (ENSCJAG00000007406) #24	WDR35 (ENSCJAG00000007386) #25	TTC32 (ENSCJAG00000065690) #26	OSR1 (ENSCJAG00000007379) #27	ENSCJAG00000083040	ENSCJAG00000022933	NT5C1B (ENSCJAG00000007361) #28	KCNS3 (ENSCJAG00000007354) #30	MSGN1 (ENSCJAG00000032633) #31	GEN1 (ENSCJAG00000007327) #32	SMC6 (ENSCJAG00000007282) #33	VSNL1 (ENSCJAG00000002578) #34	RAD51AP2 (ENSCJAG00000007262)	CYRIA (ENSCJAG00000043048) #36
Cebidae_a	ANCESTRAL SPECIES	46	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00950000182926.b.d.c.a.g.a	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905.n.a #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Capuchin	MODERN SPECIES	1	SF3B6 (ENSCCAG00000036653) #8	FKBP1B (ENSCCAG00000003872) #9	WDCP (ENSCCAG00000035342) #10	MFSD2B (ENSCCAG00000026318) #11	UBXN2A (ENSCCAG00000025921) #12	ENSCCAG00000021209	ENSCCAG00000025817	ATAD2B (ENSCCAG00000031116) #13	KLHL29 (ENSCCAG00000036850) #14	APOB (ENSCCAG00000021140) #15	LDAH (ENSCCAG00000033829) #16	GDF7 (ENSCCAG00000035529) #17	HS1BP3 (ENSCCAG00000028038) #18	RHOB (ENSCCAG00000018485) #19	PUM2 (ENSCCAG00000037035) #21	SDC1 (ENSCCAG00000031573) #22	ENSCCAG00000019764	LAPTM4A (ENSCCAG00000029231) #23	MATN3 (ENSCCAG00000033118) #24	WDR35 (ENSCCAG00000030486) #25	TTC32 (ENSCCAG00000025284) #26	OSR1 (ENSCCAG00000029161) #27	NT5C1B (ENSCCAG00000020565) #28	RDH14 (ENSCCAG00000027491) #29	KCNS3 (ENSCCAG00000020195) #30	MSGN1 (ENSCCAG00000020077) #31	GEN1 (ENSCCAG00000031121) #32	SMC6 (ENSCCAG00000027451) #33	VSNL1 (ENSCCAG00000027421) #34	RAD51AP2 (ENSCCAG00000024012)	ENSCCAG00000027131
Bolivian squirrel monkey	MODERN SPECIES	113	SF3B6 (ENSSBOG00000002914) #8	FKBP1B (ENSSBOG00000020385) #9	ENSSBOG00000029165 #10	MFSD2B (ENSSBOG00000022320) #11	UBXN2A (ENSSBOG00000023884) #12	ENSSBOG00000031186	ATAD2B (ENSSBOG00000032583) #13	KLHL29 (ENSSBOG00000021000) #14	APOB (ENSSBOG00000008834) #15	LDAH (ENSSBOG00000031409) #16	GDF7 (ENSSBOG00000022327) #17	HS1BP3 (ENSSBOG00000023433) #18	ENSSBOG00000032320	RHOB (ENSSBOG00000013056) #19	PUM2 (ENSSBOG00000022007) #21	ENSSBOG00000029288 #22	LAPTM4A (ENSSBOG00000031549) #23	MATN3 (ENSSBOG00000027840) #24	WDR35 (ENSSBOG00000030509) #25	TTC32 (ENSSBOG00000024543) #26	OSR1 (ENSSBOG00000023175) #27	ENSSBOG00000023931	NT5C1B (ENSSBOG00000030055) #28	RDH14 (ENSSBOG00000028443) #29	KCNS3 (ENSSBOG00000010067) #30	MSGN1 (ENSSBOG00000010657) #31	GEN1 (ENSSBOG00000031046) #32	SMC6 (ENSSBOG00000020240) #33	VSNL1 (ENSSBOG00000029668) #34	RAD51AP2 (ENSSBOG00000028552)	CYRIA (ENSSBOG00000025029) #36
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Hominidae	ANCESTRAL SPECIES	19	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00550000076422	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00550000076422	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00910000147230	ENSGT00940000164653	ENSGT00910000147240	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Gorilla	MODERN SPECIES	14	MFSD2B (ENSGGOG00000007752) #11	ENSGGOG00000036282	UBXN2A (ENSGGOG00000002445) #12	ATAD2B (ENSGGOG00000006027) #13	KLHL29 (ENSGGOG00000013889) #14	ENSGGOG00000024059	TDRD15 (ENSGGOG00000026710)	APOB (ENSGGOG00000005179) #15	LDAH (ENSGGOG00000000226) #16	GDF7 (ENSGGOG00000000225) #17	RHOB (ENSGGOG00000042542) #19	PUM2 (ENSGGOG00000011374) #21	ENSGGOG00000037272	ENSGGOG00000040988	ENSGGOG00000027238	SDC1 (ENSGGOG00000041852) #22	LAPTM4A (ENSGGOG00000027710) #23	MATN3 (ENSGGOG00000009798) #24	WDR35 (ENSGGOG00000009782) #25	TTC32 (ENSGGOG00000009777) #26	ENSGGOG00000037043	OSR1 (ENSGGOG00000016877) #27	NT5C1B (ENSGGOG00000014980) #28	KCNS3 (ENSGGOG00000000972) #30	MSGN1 (ENSGGOG00000012168) #31	GEN1 (ENSGGOG00000012157) #32	SMC6 (ENSGGOG00000003864) #33	VSNL1 (ENSGGOG00000008280) #34	RAD51AP2 (ENSGGOG00000004887)	ENSGGOG00000038621	FAM49A (ENSGGOG00000001230) #36
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00550000076422	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00910000147230	ENSGT00940000164653	ENSGT00910000147240	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Human	MODERN SPECIES	11	FAM228B (ENSG00000219626)	SF3B6 (ENSG00000115128) #8	FKBP1B (ENSG00000119782) #9	WDCP (ENSG00000163026) #10	MFSD2B (ENSG00000205639) #11	UBXN2A (ENSG00000173960) #12	ATAD2B (ENSG00000119778) #13	KLHL29 (ENSG00000119771) #14	TDRD15 (ENSG00000218819)	APOB (ENSG00000084674) #15	LDAH (ENSG00000118961) #16	GDF7 (ENSG00000143869) #17	HS1BP3 (ENSG00000118960) #18	RHOB (ENSG00000143878) #19	PUM2 (ENSG00000055917) #21	SDC1 (ENSG00000115884) #22	LAPTM4A (ENSG00000068697) #23	MATN3 (ENSG00000132031) #24	WDR35 (ENSG00000118965) #25	TTC32 (ENSG00000183891) #26	OSR1 (ENSG00000143867) #27	NT5C1B (ENSG00000185013) #28	NT5C1B-RDH14 (ENSG00000250741)	RDH14 (ENSG00000240857) #29	KCNS3 (ENSG00000170745) #30	MSGN1 (ENSG00000151379) #31	GEN1 (ENSG00000178295) #32	SMC6 (ENSG00000163029) #33	VSNL1 (ENSG00000163032) #34	RAD51AP2 (ENSG00000214842)	CYRIA (ENSG00000197872) #36
Pan	ANCESTRAL SPECIES	17	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00550000076422	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00390000002743.h	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00910000147230	ENSGT00940000164653	ENSGT00910000147240	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Chimpanzee	MODERN SPECIES	14	UBXN2A (ENSPTRG00000011705) #12	ATAD2B (ENSPTRG00000011702) #13	KLHL29 (ENSPTRG00000011701) #14	ENSPTRG00000048960	TDRD15 (ENSPTRG00000024174)	APOB (ENSPTRG00000011699) #15	LDAH (ENSPTRG00000011698) #16	GDF7 (ENSPTRG00000011697) #17	HS1BP3 (ENSPTRG00000011696) #18	ENSPTRG00000016906	ENSPTRG00000052538	RHOB (ENSPTRG00000046722) #19	PUM2 (ENSPTRG00000011692) #21	ENSPTRG00000050463	ENSPTRG00000043608	SDC1 (ENSPTRG00000044887) #22	LAPTM4A (ENSPTRG00000011690) #23	MATN3 (ENSPTRG00000011689) #24	WDR35 (ENSPTRG00000011686) #25	TTC32 (ENSPTRG00000011685) #26	ENSPTRG00000045822	ENSPTRG00000039202	OSR1 (ENSPTRG00000011683) #27	NT5C1B (ENSPTRG00000011681) #28	KCNS3 (ENSPTRG00000011680) #30	MSGN1 (ENSPTRG00000011679) #31	GEN1 (ENSPTRG00000011678) #32	SMC6 (ENSPTRG00000011677) #33	VSNL1 (ENSPTRG00000011675) #34	RAD51AP2 (ENSPTRG00000034119)	ENSPTRG00000052339
Bonobo	MODERN SPECIES	14	ATAD2B (ENSPPAG00000033306) #13	KLHL29 (ENSPPAG00000030367) #14	ENSPPAG00000025710	TDRD15 (ENSPPAG00000032970)	APOB (ENSPPAG00000011975) #15	LDAH (ENSPPAG00000016359) #16	ENSPPAG00000041145 #17	HS1BP3 (ENSPPAG00000043977) #18	ENSPPAG00000008002	ENSPPAG00000029523	RHOB (ENSPPAG00000023187) #19	ENSPPAG00000039825	PUM2 (ENSPPAG00000023095) #21	ENSPPAG00000039090	ENSPPAG00000037572	SDC1 (ENSPPAG00000037638) #22	LAPTM4A (ENSPPAG00000037069) #23	MATN3 (ENSPPAG00000035472) #24	WDR35 (ENSPPAG00000037901) #25	TTC32 (ENSPPAG00000035271) #26	ENSPPAG00000034662	OSR1 (ENSPPAG00000032777) #27	NT5C1B (ENSPPAG00000030956) #28	ENSPPAG00000033270 #29	KCNS3 (ENSPPAG00000000574) #30	MSGN1 (ENSPPAG00000033217) #31	GEN1 (ENSPPAG00000028355) #32	SMC6 (ENSPPAG00000015508) #33	VSNL1 (ENSPPAG00000032929) #34	RAD51AP2 (ENSPPAG00000041865)	ENSPPAG00000027462
Orangutan	MODERN SPECIES	14	SF3B6 (ENSPPYG00000036931) #8	FKBP1B (ENSPPYG00000012604) #9	WDCP (ENSPPYG00000012605) #10	MFSD2B (ENSPPYG00000012606) #11	UBXN2A (ENSPPYG00000012607) #12	ATAD2B (ENSPPYG00000012609) #13	KLHL29 (ENSPPYG00000012610) #14	ENSPPYG00000012611	TDRD15 (ENSPPYG00000031614)	APOB (ENSPPYG00000012612) #15	LDAH (ENSPPYG00000037972) #16	GDF7 (ENSPPYG00000035678) #17	HS1BP3 (ENSPPYG00000012615) #18	RHOB (ENSPPYG00000012616) #19	PUM2 (ENSPPYG00000012617) #21	SDC1 (ENSPPYG00000032047) #22	LAPTM4A (ENSPPYG00000012620) #23	MATN3 (ENSPPYG00000012621) #24	WDR35 (ENSPPYG00000012622) #25	ENSPPYG00000036668	ENSPPYG00000012623 #26	ENSPPYG00000012624 #27	ENSPPYG00000012626 #28	KCNS3 (ENSPPYG00000012627) #30	MSGN1 (ENSPPYG00000012628) #31	GEN1 (ENSPPYG00000012629) #32	SMC6 (ENSPPYG00000012630) #33	VSNL1 (ENSPPYG00000012631) #34	RAD51AP2 (ENSPPYG00000012632)	CYRIA (ENSPPYG00000012634) #36	ENSPPYG00000038333
Gibbon	MODERN SPECIES	9	MFSD2B (ENSNLEG00000000769) #11	UBXN2A (ENSNLEG00000000751) #12	ENSNLEG00000033640	ATAD2B (ENSNLEG00000000713) #13	KLHL29 (ENSNLEG00000000686) #14	ENSNLEG00000028338	APOB (ENSNLEG00000000598) #15	LDAH (ENSNLEG00000032022) #16	GDF7 (ENSNLEG00000002638) #17	HS1BP3 (ENSNLEG00000002614) #18	ENSNLEG00000030630	RHOB (ENSNLEG00000030179) #19	PUM2 (ENSNLEG00000002509) #21	ENSNLEG00000002506	ENSNLEG00000029549	SDC1 (ENSNLEG00000031569) #22	LAPTM4A (ENSNLEG00000002305) #23	MATN3 (ENSNLEG00000002247) #24	WDR35 (ENSNLEG00000002032) #25	TTC32 (ENSNLEG00000030350) #26	ENSNLEG00000028344	OSR1 (ENSNLEG00000002004) #27	ENSNLEG00000033627	NT5C1B (ENSNLEG00000001850) #28	RDH14 (ENSNLEG00000028221) #29	KCNS3 (ENSNLEG00000001834) #30	MSGN1 (ENSNLEG00000018810) #31	GEN1 (ENSNLEG00000029593) #32	SMC6 (ENSNLEG00000001569) #33	VSNL1 (ENSNLEG00000001537) #34	RAD51AP2 (ENSNLEG00000001524)
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00910000147230	ENSGT00940000153340.B.k.b	ENSGT00910000147240	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Rhinopithecus	ANCESTRAL SPECIES	205	ENSGT00390000017067	ENSGT00530000064185.a	ENSGT00530000064185.b	ENSGT00940000155936.b	ENSGT00990000205444	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133.i	ENSGT00390000002143.b	ENSGT00940000157575 #21	ENSGT00910000147230	ENSGT00940000153340.B.k.b	ENSGT00910000147240	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25
Black snub-nosed monkey	MODERN SPECIES	1130	PFN4 (ENSRBIG00000007265)	FAM228B (ENSRBIG00000037047)	FAM228A (ENSRBIG00000036877)	ITSN2 (ENSRBIG00000033688)	ENSRBIG00000025719	NCOA1 (ENSRBIG00000035295)	PTRHD1 (ENSRBIG00000032190)	CENPO (ENSRBIG00000040211)	ADCY3 (ENSRBIG00000034802)	ENSRBIG00000041935	EFR3B (ENSRBIG00000029715)	PUM2 (ENSRBIG00000044880) #21	ENSRBIG00000044692	ENSRBIG00000025027	ENSRBIG00000036594	SDC1 (ENSRBIG00000034487) #22	LAPTM4A (ENSRBIG00000014447) #23	MATN3 (ENSRBIG00000040709) #24
Golden snub-nosed monkey	MODERN SPECIES	2854													ENSRROG00000029300	ENSRROG00000001955 #21	ENSRROG00000032801	SDC1 (ENSRROG00000033514) #22	LAPTM4A (ENSRROG00000045642) #23	MATN3 (ENSRROG00000033484) #24	ENSRROG00000038720 #25
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Vervet Monkey	MODERN SPECIES	5	SF3B6 (ENSCSAG00000008390) #8	FKBP1B (ENSCSAG00000008381) #9	WDCP (ENSCSAG00000008372) #10	MFSD2B (ENSCSAG00000008345) #11	UBXN2A (ENSCSAG00000008300) #12	ATAD2B (ENSCSAG00000008290) #13	KLHL29 (ENSCSAG00000008250) #14	ENSCSAG00000008205	TDRD15 (ENSCSAG00000000380)	APOB (ENSCSAG00000008169) #15	LDAH (ENSCSAG00000008123) #16	GDF7 (ENSCSAG00000008108) #17	HS1BP3 (ENSCSAG00000008096) #18	RHOB (ENSCSAG00000000379) #19	PUM2 (ENSCSAG00000008087) #21	SDC1 (ENSCSAG00000008077) #22	LAPTM4A (ENSCSAG00000008071) #23	MATN3 (ENSCSAG00000008064) #24	WDR35 (ENSCSAG00000008051) #25	TTC32 (ENSCSAG00000008028) #26	OSR1 (ENSCSAG00000008012) #27	NT5C1B (ENSCSAG00000007999) #28	RDH14 (ENSCSAG00000007969) #29	KCNS3 (ENSCSAG00000000378) #30	MSGN1 (ENSCSAG00000000377) #31	GEN1 (ENSCSAG00000007952) #32	SMC6 (ENSCSAG00000007925) #33	VSNL1 (ENSCSAG00000007914) #34	RAD51AP2 (ENSCSAG00000007907)	CYRIA (ENSCSAG00000007902) #36	MYCN (ENSCSAG00000007889) #37
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT01100000264019	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT01100000264019	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Cercopithecinae_d	ANCESTRAL SPECIES	23	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00900000143745	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT01100000264019	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Sooty mangabey	MODERN SPECIES	542	WDCP (ENSCATG00000030463) #10	MFSD2B (ENSCATG00000040488) #11	UBXN2A (ENSCATG00000007176) #12	ATAD2B (ENSCATG00000035587) #13	ENSCATG00000036009	KLHL29 (ENSCATG00000037112) #14	TDRD15 (ENSCATG00000014633)	APOB (ENSCATG00000025709) #15	LDAH (ENSCATG00000025214) #16	GDF7 (ENSCATG00000015865) #17	HS1BP3 (ENSCATG00000038867) #18	ENSCATG00000037321	RHOB (ENSCATG00000021066) #19	PUM2 (ENSCATG00000043826) #21	ENSCATG00000041330	SDC1 (ENSCATG00000044796) #22	LAPTM4A (ENSCATG00000036860) #23	MATN3 (ENSCATG00000038685) #24	WDR35 (ENSCATG00000043847) #25	TTC32 (ENSCATG00000043877) #26	ENSCATG00000035517	ENSCATG00000035076	OSR1 (ENSCATG00000041386) #27	NT5C1B (ENSCATG00000030226) #28	RDH14 (ENSCATG00000040055) #29	KCNS3 (ENSCATG00000019098) #30	MSGN1 (ENSCATG00000020832) #31	GEN1 (ENSCATG00000002261) #32	SMC6 (ENSCATG00000007538) #33	VSNL1 (ENSCATG00000043748) #34	RAD51AP2 (ENSCATG00000035523)
Drill	MODERN SPECIES	273									APOB (ENSMLEG00000034887) #15	LDAH (ENSMLEG00000032951) #16	GDF7 (ENSMLEG00000030590) #17	HS1BP3 (ENSMLEG00000036114) #18	RHOB (ENSMLEG00000014328) #19	PUM2 (ENSMLEG00000039243) #21	ENSMLEG00000041181	SDC1 (ENSMLEG00000030457) #22	LAPTM4A (ENSMLEG00000011616) #23	MATN3 (ENSMLEG00000028366) #24	WDR35 (ENSMLEG00000042194) #25	TTC32 (ENSMLEG00000034466) #26	ENSMLEG00000035262	OSR1 (ENSMLEG00000036388) #27	NT5C1B (ENSMLEG00000032260) #28	KCNS3 (ENSMLEG00000024480) #30	MSGN1 (ENSMLEG00000016060) #31	GEN1 (ENSMLEG00000037009) #32	SMC6 (ENSMLEG00000038093) #33	VSNL1 (ENSMLEG00000009493) #34	RAD51AP2 (ENSMLEG00000032822)	ENSMLEG00000032548	CYRIA (ENSMLEG00000021733) #36
Macaca	ANCESTRAL SPECIES	17	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092.c #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT01100000264019	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00910000147213	ENSGT00940000154445.f.b.b	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Pig-tailed macaque	MODERN SPECIES	561	FKBP1B (ENSMNEG00000044742) #9	WDCP (ENSMNEG00000043270) #10	MFSD2B (ENSMNEG00000042041) #11	UBXN2A (ENSMNEG00000039344) #12	ATAD2B (ENSMNEG00000040701) #13	KLHL29 (ENSMNEG00000040600) #14	TDRD15 (ENSMNEG00000018389)	APOB (ENSMNEG00000041817) #15	LDAH (ENSMNEG00000037298) #16	GDF7 (ENSMNEG00000036625) #17	HS1BP3 (ENSMNEG00000042432) #18	ENSMNEG00000035256	RHOB (ENSMNEG00000004093) #19	PUM2 (ENSMNEG00000039659) #21	ENSMNEG00000031627	SDC1 (ENSMNEG00000037009) #22	LAPTM4A (ENSMNEG00000030721) #23	MATN3 (ENSMNEG00000040055) #24	WDR35 (ENSMNEG00000043506) #25	TTC32 (ENSMNEG00000032654) #26	ENSMNEG00000000256	ENSMNEG00000040736	OSR1 (ENSMNEG00000024040) #27	NT5C1B (ENSMNEG00000031824) #28	RDH14 (ENSMNEG00000042523) #29	KCNS3 (ENSMNEG00000010748) #30	MSGN1 (ENSMNEG00000009838) #31	GEN1 (ENSMNEG00000041505) #32	SMC6 (ENSMNEG00000037394) #33
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092.c #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT01100000264019	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37	ENSGT00940000153294.m.a.d.e
Crab-eating macaque	MODERN SPECIES	4	UBXN2A (ENSMFAG00000038617) #12	ATAD2B (ENSMFAG00000045919) #13	KLHL29 (ENSMFAG00000002617) #14	ENSMFAG00000064985	ENSMFAG00000051328	ENSMFAG00000060195	APOB (ENSMFAG00000037483) #15	ENSMFAG00000042760	LDAH (ENSMFAG00000036499) #16	ENSMFAG00000052727	GDF7 (ENSMFAG00000049809) #17	HS1BP3 (ENSMFAG00000005189) #18	RHOB (ENSMFAG00000030406) #19	PUM2 (ENSMFAG00000000492) #21	ENSMFAG00000043647	ENSMFAG00000064406 #22	LAPTM4A (ENSMFAG00000036772) #23	ENSMFAG00000049571	MATN3 (ENSMFAG00000043379) #24	WDR35 (ENSMFAG00000034406) #25	TTC32 (ENSMFAG00000040343) #26	OSR1 (ENSMFAG00000039189) #27	ENSMFAG00000059615	ENSMFAG00000065687	ENSMFAG00000051219	ENSMFAG00000064231	NT5C1B (ENSMFAG00000002988) #28	KCNS3 (ENSMFAG00000007411) #30	MSGN1 (ENSMFAG00000007491) #31	GEN1 (ENSMFAG00000002080) #32	SMC6 (ENSMFAG00000033284) #33
Rhesus	MODERN SPECIES	4	WDCP (ENSMMUG00000012340) #10	MFSD2B (ENSMMUG00000012337) #11	UBXN2A (ENSMMUG00000006487) #12	ATAD2B (ENSMMUG00000020952) #13	ENSMMUG00000055073	KLHL29 (ENSMMUG00000016030) #14	TDRD15 (ENSMMUG00000048513)	APOB (ENSMMUG00000007692) #15	ENSMMUG00000056842	LDAH (ENSMMUG00000003355) #16	ENSMMUG00000055950	GDF7 (ENSMMUG00000050446) #17	HS1BP3 (ENSMMUG00000022996) #18	PUM2 (ENSMMUG00000023181) #21	ENSMMUG00000052718	SDC1 (ENSMMUG00000030922) #22	LAPTM4A (ENSMMUG00000001582) #23	MATN3 (ENSMMUG00000001579) #24	WDR35 (ENSMMUG00000001575) #25	TTC32 (ENSMMUG00000001570) #26	ENSMMUG00000056023	OSR1 (ENSMMUG00000037622) #27	NT5C1B (ENSMMUG00000014083) #28	KCNS3 (ENSMMUG00000017198) #30	MSGN1 (ENSMMUG00000008141) #31	GEN1 (ENSMMUG00000012058) #32	SMC6 (ENSMMUG00000012056) #33	VSNL1 (ENSMMUG00000040529) #34	RAD51AP2 (ENSMMUG00000058011)	CYRIA (ENSMMUG00000020385) #36	MYCN (ENSMMUG00000052363) #37
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161171 #22
Hedgehog	MODERN SPECIES	1765																SDC1 (ENSEEUG00000012508) #22
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00390000017067	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00390000017067	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Beluga whale	MODERN SPECIES	37	TP53I3 (ENSDLEG00000003236) #7	SF3B6 (ENSDLEG00000003252) #8	FKBP1B (ENSDLEG00000003261) #9	WDCP (ENSDLEG00000003277) #10	MFSD2B (ENSDLEG00000003286) #11	UBXN2A (ENSDLEG00000003355) #12	ENSDLEG00000003368 #13	ENSDLEG00000003376 #13	KLHL29 (ENSDLEG00000003396) #14	APOB (ENSDLEG00000003485) #15	LDAH (ENSDLEG00000003656) #16	GDF7 (ENSDLEG00000003664) #17	HS1BP3 (ENSDLEG00000003696) #18	RHOB (ENSDLEG00000003706) #19	PUM2 (ENSDLEG00000003713) #21	SDC1 (ENSDLEG00000003726) #22	LAPTM4A (ENSDLEG00000003732) #23	MATN3 (ENSDLEG00000003741) #24	WDR35 (ENSDLEG00000003761) #25	TTC32 (ENSDLEG00000003795) #26	ENSDLEG00000003800	OSR1 (ENSDLEG00000003804) #27	NT5C1B (ENSDLEG00000003811) #28	RDH14 (ENSDLEG00000003827) #29	KCNS3 (ENSDLEG00000003837) #30	MSGN1 (ENSDLEG00000003842) #31	GEN1 (ENSDLEG00000003850) #32	SMC6 (ENSDLEG00000003874) #33	VSNL1 (ENSDLEG00000003903) #34	RAD51AP2 (ENSDLEG00000003910)	FAM49A (ENSDLEG00000003918) #36
Narwhal	MODERN SPECIES	305	PFN4 (ENSMMNG00015008611)	TP53I3 (ENSMMNG00015008625) #7	SF3B6 (ENSMMNG00015008636) #8	FKBP1B (ENSMMNG00015008655) #9	WDCP (ENSMMNG00015008672) #10	MFSD2B (ENSMMNG00015008694) #11	UBXN2A (ENSMMNG00015008718) #12	ATAD2B (ENSMMNG00015008735) #13	KLHL29 (ENSMMNG00015008756) #14	APOB (ENSMMNG00015008780) #15	LDAH (ENSMMNG00015008820) #16	GDF7 (ENSMMNG00015008839) #17	HS1BP3 (ENSMMNG00015008848) #18	RHOB (ENSMMNG00015008862) #19	PUM2 (ENSMMNG00015008879) #21	SDC1 (ENSMMNG00015005397) #22	LAPTM4A (ENSMMNG00015005414) #23	MATN3 (ENSMMNG00015005436) #24	WDR35 (ENSMMNG00015005480) #25	TTC32 (ENSMMNG00015005504) #26	OSR1 (ENSMMNG00015005525) #27	NT5C1B (ENSMMNG00015005540) #28	RDH14 (ENSMMNG00015005575) #29	KCNS3 (ENSMMNG00015005585) #30	MSGN1 (ENSMMNG00015005600) #31	GEN1 (ENSMMNG00015005619) #32	SMC6 (ENSMMNG00015005666) #33	VSNL1 (ENSMMNG00015005727) #34	RAD51AP2 (ENSMMNG00015005739)	CYRIA (ENSMMNG00015005774) #36	ENSMMNG00015005789 #37
Vaquita	MODERN SPECIES	4	FAM228B (ENSPSNG00000006789)	TP53I3 (ENSPSNG00000006747) #7	SF3B6 (ENSPSNG00000006711) #8	FKBP1B (ENSPSNG00000006673) #9	WDCP (ENSPSNG00000006641) #10	MFSD2B (ENSPSNG00000006537) #11	UBXN2A (ENSPSNG00000006489) #12	ATAD2B (ENSPSNG00000006447) #13	KLHL29 (ENSPSNG00000006365) #14	APOB (ENSPSNG00000006093) #15	LDAH (ENSPSNG00000005977) #16	GDF7 (ENSPSNG00000005912) #17	HS1BP3 (ENSPSNG00000005889) #18	RHOB (ENSPSNG00000005853) #19	PUM2 (ENSPSNG00000005720) #21	SDC1 (ENSPSNG00000005664) #22	LAPTM4A (ENSPSNG00000005648) #23	MATN3 (ENSPSNG00000005606) #24	WDR35 (ENSPSNG00000005538) #25	TTC32 (ENSPSNG00000005497) #26	OSR1 (ENSPSNG00000005478) #27	NT5C1B (ENSPSNG00000005430) #28	RDH14 (ENSPSNG00000005407) #29	KCNS3 (ENSPSNG00000005395) #30	MSGN1 (ENSPSNG00000005383) #31	GEN1 (ENSPSNG00000005368) #32	SMC6 (ENSPSNG00000005297) #33	VSNL1 (ENSPSNG00000005265) #34	RAD51AP2 (ENSPSNG00000005244)	CYRIA (ENSPSNG00000005208) #36	ENSPSNG00000005190
Dolphin	MODERN SPECIES	4592															PUM2 (ENSTTRG00000004887) #21	SDC1 (ENSTTRG00000004870) #22
Sperm whale	MODERN SPECIES	1172																SDC1 (ENSPCTG00005018750) #22
Blue whale	MODERN SPECIES	4	FKBP1B (ENSBMSG00010013149) #9	WDCP (ENSBMSG00010013158) #10	MFSD2B (ENSBMSG00010013171) #11	UBXN2A (ENSBMSG00010013209) #12	ENSBMSG00010013222	ATAD2B (ENSBMSG00010013251) #13	KLHL29 (ENSBMSG00010013307) #14	ENSBMSG00010013332	ENSBMSG00010013370 #15	LDAH (ENSBMSG00010013418) #16	GDF7 (ENSBMSG00010013453) #17	HS1BP3 (ENSBMSG00010013470) #18	RHOB (ENSBMSG00010013496) #19	PUM2 (ENSBMSG00010013534) #21	ENSBMSG00010013651	SDC1 (ENSBMSG00010013669) #22	LAPTM4A (ENSBMSG00010013698) #23	MATN3 (ENSBMSG00010013735) #24	WDR35 (ENSBMSG00010013819) #25	TTC32 (ENSBMSG00010014051) #26	OSR1 (ENSBMSG00010014098) #27	NT5C1B (ENSBMSG00010014150) #28	RDH14 (ENSBMSG00010014286) #29	KCNS3 (ENSBMSG00010014305) #30	MSGN1 (ENSBMSG00010014319) #31	ENSBMSG00010014350 #32	SMC6 (ENSBMSG00010014555) #33	ENSBMSG00010014894	VSNL1 (ENSBMSG00010014927) #34	CYRIA (ENSBMSG00010015112) #36	MYCN (ENSBMSG00010015182) #37
Pecora	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT01010000230154	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Percora_a	ANCESTRAL SPECIES	13	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT01010000230154	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Bovidae	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT01010000230154	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181.e #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
American bison	MODERN SPECIES	3068	FKBP1B (ENSBBBG00000004715) #9	WDCP (ENSBBBG00000018782) #10	MFSD2B (ENSBBBG00000004782) #11	UBXN2A (ENSBBBG00000018929) #12	ATAD2B (ENSBBBG00000018952) #13	KLHL29 (ENSBBBG00000019026) #14	ENSBBBG00000004864	ENSBBBG00000004865	TDRD15 (ENSBBBG00000004866)	APOB (ENSBBBG00000019104) #15	LDAH (ENSBBBG00000019145) #16	HS1BP3 (ENSBBBG00000019208) #18	RHOB (ENSBBBG00000019223) #19	ENSBBBG00000019228 ##20	PUM2 (ENSBBBG00000019297) #21	SDC1 (ENSBBBG00000009171) #22	LAPTM4A (ENSBBBG00000007183) #23	MATN3 (ENSBBBG00000019335) #24	WDR35 (ENSBBBG00000007319) #25	TTC32 (ENSBBBG00000006785) #26	OSR1 (ENSBBBG00000019430) #27	NT5C1B (ENSBBBG00000009192) #28	ENSBBBG00000019450 #29	KCNS3 (ENSBBBG00000019452) #30	MSGN1 (ENSBBBG00000005230) #31	GEN1 (ENSBBBG00000005250) #32	SMC6 (ENSBBBG00000019549) #33	VSNL1 (ENSBBBG00000005304) #34	RAD51AP2 (ENSBBBG00000005308)
Bos	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT01030000234916.g.a	ENSGT00550000074784.a.b	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181.e #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Bos_a	ANCESTRAL SPECIES	6	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT00550000074784.a.b	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181.e #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Wild yak	MODERN SPECIES	752	MFSD2B (ENSBMUG00000006096) #11	UBXN2A (ENSBMUG00000006075) #12	ATAD2B (ENSBMUG00000006045) #13	KLHL29 (ENSBMUG00000005980) #14	ENSBMUG00000005963	ENSBMUG00000005951	ENSBMUG00000005946	ENSBMUG00000005934	TDRD15 (ENSBMUG00000005920)	APOB (ENSBMUG00000005903) #15	LDAH (ENSBMUG00000005822) #16	HS1BP3 (ENSBMUG00000005770) #18	RHOB (ENSBMUG00000005721) #19	ENSBMUG00000005710 ##20	PUM2 (ENSBMUG00000005650) #21	SDC1 (ENSBMUG00000005608) #22	LAPTM4A (ENSBMUG00000005607) #23	MATN3 (ENSBMUG00000005603) #24	WDR35 (ENSBMUG00000005571) #25	ENSBMUG00000005524	OSR1 (ENSBMUG00000005507) #27	NT5C1B (ENSBMUG00000005486) #28
Domestic yak	MODERN SPECIES	28	WDCP (ENSBGRG00000019427) #10	MFSD2B (ENSBGRG00000019458) #11	UBXN2A (ENSBGRG00000019653) #12	ATAD2B (ENSBGRG00000019718) #13	KLHL29 (ENSBGRG00000019818) #14	ENSBGRG00000019916	TDRD15 (ENSBGRG00000019929)	ENSBGRG00000019965 #15	LDAH (ENSBGRG00000020053) #16	GDF7 (ENSBGRG00000020284) #17	HS1BP3 (ENSBGRG00000020332) #18	RHOB (ENSBGRG00000020410) #19	ENSBGRG00000020423 #19	ENSBGRG00000020441 ##20	PUM2 (ENSBGRG00000020491) #21	SDC1 (ENSBGRG00000020622) #22	MATN3 (ENSBGRG00000020733) #24	WDR35 (ENSBGRG00000020967) #25	TTC32 (ENSBGRG00000021780) #26	ENSBGRG00000021825	OSR1 (ENSBGRG00000021840) #27	NT5C1B (ENSBGRG00000021877) #28	ENSBGRG00000021977 #29	KCNS3 (ENSBGRG00000022008) #30	MSGN1 (ENSBGRG00000022021) #31	GEN1 (ENSBGRG00000022034) #32	SMC6 (ENSBGRG00000022073) #33	VSNL1 (ENSBGRG00000022276) #34	RAD51AP2 (ENSBGRG00000022307)	CYRIA (ENSBGRG00000022323) #36	ENSBGRG00000022487 #37
Bos_b	ANCESTRAL SPECIES	16	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00950000183014.f.a.h.u.a.a.a.b	ENSGT01030000234916.g.a.a	ENSGT00550000074784.a.b	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.b.b	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181.e #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Cow	MODERN SPECIES	2	WDCP (ENSBTAG00000016987) #10	MFSD2B (ENSBTAG00000002034) #11	UBXN2A (ENSBTAG00000002033) #12	ATAD2B (ENSBTAG00000017255) #13	KLHL29 (ENSBTAG00000021969) #14	ENSBTAG00000004565	ENSBTAG00000054991	ENSBTAG00000030834	TDRD15 (ENSBTAG00000051889)	APOB (ENSBTAG00000008505) #15	LDAH (ENSBTAG00000031014) #16	GDF7 (ENSBTAG00000038224) #17	HS1BP3 (ENSBTAG00000015490) #18	ENSBTAG00000049117 ##20	PUM2 (ENSBTAG00000011155) #21	SDC1 (ENSBTAG00000011154) #22	LAPTM4A (ENSBTAG00000020894) #23	ENSBTAG00000052052	MATN3 (ENSBTAG00000020893) #24	WDR35 (ENSBTAG00000051164) #25	TTC32 (ENSBTAG00000015587) #26	OSR1 (ENSBTAG00000008113) #27	NT5C1B (ENSBTAG00000005270) #28	RDH14 (ENSBTAG00000023928) #29	MSGN1 (ENSBTAG00000039113) #31	GEN1 (ENSBTAG00000020059) #32	SMC6 (ENSBTAG00000018256) #33	VSNL1 (ENSBTAG00000017158) #34	RAD51AP2 (ENSBTAG00000037812)	CYRIA (ENSBTAG00000012779) #36	MYCN (ENSBTAG00000023372) #37
Hybrid Bos Indicus	MODERN SPECIES	2	ATAD2B (ENSBIXG00005026503) #13	ENSBIXG00005026418	KLHL29 (ENSBIXG00005004508) #14	ENSBIXG00005026267	ENSBIXG00005026241	ENSBIXG00005005602	ENSBIXG00005026182	TDRD15 (ENSBIXG00005026149)	APOB (ENSBIXG00005006700) #15	LDAH (ENSBIXG00005026010) #16	GDF7 (ENSBIXG00005025857) #17	HS1BP3 (ENSBIXG00005025838) #18	RHOB (ENSBIXG00005004398) #19	ENSBIXG00005025762 ##20	PUM2 (ENSBIXG00005004375) #21	SDC1 (ENSBIXG00005004335) #22	LAPTM4A (ENSBIXG00005025436) #23	ENSBIXG00005025414	MATN3 (ENSBIXG00005006070) #24	WDR35 (ENSBIXG00005025304) #25	TTC32 (ENSBIXG00005025110) #26	ENSBIXG00005025042 #27	NT5C1B (ENSBIXG00005025000) #28	RDH14 (ENSBIXG00005024953) #29	KCNS3 (ENSBIXG00005024916) #30	MSGN1 (ENSBIXG00005024894) #31	GEN1 (ENSBIXG00005024882) #32	SMC6 (ENSBIXG00005004235) #33	VSNL1 (ENSBIXG00005024708) #34	RAD51AP2 (ENSBIXG00005024673)	CYRIA (ENSBIXG00005024640) #36
Caprinae	ANCESTRAL SPECIES	9	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00930000152728.b.b	ENSGT00950000183014.f.a.h.u.a.a.a	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT01010000230154	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Goat	MODERN SPECIES	2	MFSD2B (ENSCHIG00000015093) #11	UBXN2A (ENSCHIG00000008772) #12	ATAD2B (ENSCHIG00000016699) #13	KLHL29 (ENSCHIG00000021081) #14	ENSCHIG00000013040	TDRD15 (ENSCHIG00000024751)	APOB (ENSCHIG00000016651) #15	LDAH (ENSCHIG00000013047) #16	ENSCHIG00000024630	GDF7 (ENSCHIG00000011381) #17	HS1BP3 (ENSCHIG00000026302) #18	RHOB (ENSCHIG00000012713) #19	ENSCHIG00000018368 ##20	PUM2 (ENSCHIG00000022180) #21	ENSCHIG00000025915	SDC1 (ENSCHIG00000018782) #22	LAPTM4A (ENSCHIG00000022265) #23	MATN3 (ENSCHIG00000018061) #24	WDR35 (ENSCHIG00000006588) #25	TTC32 (ENSCHIG00000025091) #26	OSR1 (ENSCHIG00000020202) #27	NT5C1B (ENSCHIG00000026605) #28	ENSCHIG00000027201 #29	KCNS3 (ENSCHIG00000012986) #30	MSGN1 (ENSCHIG00000010365) #31	GEN1 (ENSCHIG00000013888) #32	SMC6 (ENSCHIG00000010144) #33	VSNL1 (ENSCHIG00000006913) #34	CYRIA (ENSCHIG00000018672) #36	MYCN (ENSCHIG00000017882) #37	DDX1 (ENSCHIG00000011046)
Rambouillet Sheep	MODERN SPECIES	19	MFSD2B (ENSOARG00020019757) #11	UBXN2A (ENSOARG00020019662) #12	ENSOARG00020019629	ATAD2B (ENSOARG00020019344) #13	KLHL29 (ENSOARG00020019264) #14	ENSOARG00020019210	ENSOARG00020019194	TDRD15 (ENSOARG00020019143)	ENSOARG00020018981 #15	ENSOARG00020018924	LDAH (ENSOARG00020018657) #16	GDF7 (ENSOARG00020018622) #17	HS1BP3 (ENSOARG00020018571) #18	RHOB (ENSOARG00020018495) #19	PUM2 (ENSOARG00020018298) #21	SDC1 (ENSOARG00020018247) #22	LAPTM4A (ENSOARG00020018198) #23	MATN3 (ENSOARG00020018018) #24	WDR35 (ENSOARG00020017694) #25	TTC32 (ENSOARG00020017652) #26	OSR1 (ENSOARG00020017609) #27	NT5C1B (ENSOARG00020017529) #28	RDH14 (ENSOARG00020017495) #29	KCNS3 (ENSOARG00020017454) #30	MSGN1 (ENSOARG00020017429) #31	SMC6 (ENSOARG00020016887) #33	VSNL1 (ENSOARG00020016837) #34	RAD51AP2 (ENSOARG00020016789)	FAM49A (ENSOARG00020016491) #36	ENSOARG00020016447 #37	DDX1 (ENSOARG00020016090)
Siberian musk deer	MODERN SPECIES	239						ENSMMSG00000003169	TDRD15 (ENSMMSG00000003160)	APOB (ENSMMSG00000003055) #15	ENSMMSG00000003002	ENSMMSG00000002886 #16	GDF7 (ENSMMSG00000002860) #17	HS1BP3 (ENSMMSG00000002840) #18	RHOB (ENSMMSG00000002823) #19	ENSMMSG00000002810 ##20	PUM2 (ENSMMSG00000002715) #21	SDC1 (ENSMMSG00000002684) #22	ENSMMSG00000002671	LAPTM4A (ENSMMSG00000002657) #23	MATN3 (ENSMMSG00000002615) #24	ENSMMSG00000002584	WDR35 (ENSMMSG00000002532) #25	TTC32 (ENSMMSG00000002503) #26	OSR1 (ENSMMSG00000002491) #27	NT5C1B (ENSMMSG00000002465) #28	RDH14 (ENSMMSG00000002449) #29	KCNS3 (ENSMMSG00000002436) #30	MSGN1 (ENSMMSG00000002419) #31	GEN1 (ENSMMSG00000002401) #32	SMC6 (ENSMMSG00000002375) #33	VSNL1 (ENSMMSG00000002354) #34	ENSMMSG00000002335
Yarkand deer	MODERN SPECIES	2	WDCP (ENSCHYG00000016368) #10	MFSD2B (ENSCHYG00000016413) #11	ENSCHYG00000016517 #12	ATAD2B (ENSCHYG00000016580) #13	KLHL29 (ENSCHYG00000017090) #14	ENSCHYG00000017476	TDRD15 (ENSCHYG00000017505)	APOB (ENSCHYG00000017558) #15	LDAH (ENSCHYG00000017844) #16	ENSCHYG00000005540	GDF7 (ENSCHYG00000005551) #17	HS1BP3 (ENSCHYG00000005568) #18	RHOB (ENSCHYG00000005587) #19	ENSCHYG00000005597 ##20	PUM2 (ENSCHYG00000005651) #21	SDC1 (ENSCHYG00000005966) #22	LAPTM4A (ENSCHYG00000005989) #23	MATN3 (ENSCHYG00000006044) #24	WDR35 (ENSCHYG00000006261) #25	TTC32 (ENSCHYG00000006877) #26	OSR1 (ENSCHYG00000006938) #27	ENSCHYG00000006946	NT5C1B (ENSCHYG00000006961) #28	RDH14 (ENSCHYG00000007014) #29	KCNS3 (ENSCHYG00000007031) #30	MSGN1 (ENSCHYG00000007045) #31	GEN1 (ENSCHYG00000007066) #32	SMC6 (ENSCHYG00000007159) #33	VSNL1 (ENSCHYG00000007343) #34	RAD51AP2 (ENSCHYG00000007371)	CYRIA (ENSCHYG00000007408) #36
Camelidae	ANCESTRAL SPECIES	12	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT01090000263460	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Arabian camel	MODERN SPECIES	6	WDCP (ENSCDRG00005007980) #10	MFSD2B (ENSCDRG00005007767) #11	UBXN2A (ENSCDRG00005007692) #12	ATAD2B (ENSCDRG00005007580) #13	KLHL29 (ENSCDRG00005007511) #14	ENSCDRG00005007461	ENSCDRG00005007452	TDRD15 (ENSCDRG00005007436)	APOB (ENSCDRG00005005937) #15	ENSCDRG00005005813	LDAH (ENSCDRG00005005753) #16	HS1BP3 (ENSCDRG00005005637) #18	RHOB (ENSCDRG00005005629) #19	PUM2 (ENSCDRG00005005454) #21	ENSCDRG00005005424	SDC1 (ENSCDRG00005005384) #22	ENSCDRG00005005168 ##20	LAPTM4A (ENSCDRG00005005142) #23	MATN3 (ENSCDRG00005005117) #24	ENSCDRG00005005097 #25	TTC32 (ENSCDRG00005005072) #26	OSR1 (ENSCDRG00005005052) #27	NT5C1B (ENSCDRG00005005015) #28	RDH14 (ENSCDRG00005004999) #29	KCNS3 (ENSCDRG00005004986) #30	MSGN1 (ENSCDRG00005004972) #31	GEN1 (ENSCDRG00005004909) #32	SMC6 (ENSCDRG00005004835) #33	VSNL1 (ENSCDRG00005004814) #34	RAD51AP2 (ENSCDRG00005004783)	CYRIA (ENSCDRG00005004743) #36
Suina	ANCESTRAL SPECIES	13	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Pig	MODERN SPECIES	11	ENSSSCG00000041783	ATAD2B (ENSSSCG00000008591) #13	ENSSSCG00000055154	KLHL29 (ENSSSCG00000008593) #14	ENSSSCG00000044002	ENSSSCG00000039066	ENSSSCG00000048838	APOB (ENSSSCG00000008595) #15	LDAH (ENSSSCG00000025357) #16	GDF7 (ENSSSCG00000028931) #17	HS1BP3 (ENSSSCG00000030115) #18	RHOB (ENSSSCG00000043781) #19	ENSSSCG00000008599 ##20	ENSSSCG00000054581 ##20	PUM2 (ENSSSCG00000008600) #21	SDC1 (ENSSSCG00000008601) #22	LAPTM4A (ENSSSCG00000008602) #23	MATN3 (ENSSSCG00000008603) #24	WDR35 (ENSSSCG00000008604) #25	TTC32 (ENSSSCG00000053616) #26	ENSSSCG00000058710	OSR1 (ENSSSCG00000060496) #27	ENSSSCG00000054495	NT5C1B (ENSSSCG00000008607) #28	RDH14 (ENSSSCG00000008608) #29	KCNS3 (ENSSSCG00000031905) #30	ENSSSCG00000040752	MSGN1 (ENSSSCG00000026538) #31	GEN1 (ENSSSCG00000008613) #32	SMC6 (ENSSSCG00000008614) #33	VSNL1 (ENSSSCG00000008615) #34
Chacoan peccary	MODERN SPECIES	776	TP53I3 (ENSCWAG00000004737) #7	SF3B6 (ENSCWAG00000004714) #8	FKBP1B (ENSCWAG00000004665) #9	WDCP (ENSCWAG00000004635) #10	MFSD2B (ENSCWAG00000004534) #11	UBXN2A (ENSCWAG00000004513) #12	ATAD2B (ENSCWAG00000004481) #13	KLHL29 (ENSCWAG00000004442) #14	APOB (ENSCWAG00000004185) #15	LDAH (ENSCWAG00000004087) #16	GDF7 (ENSCWAG00000004046) #17	HS1BP3 (ENSCWAG00000004014) #18	RHOB (ENSCWAG00000004001) #19	ENSCWAG00000003897 ##20	PUM2 (ENSCWAG00000003696) #21	SDC1 (ENSCWAG00000016920) #22	LAPTM4A (ENSCWAG00000016902) #23	MATN3 (ENSCWAG00000016742) #24	WDR35 (ENSCWAG00000016523) #25	TTC32 (ENSCWAG00000016481) #26	OSR1 (ENSCWAG00000016456) #27	NT5C1B (ENSCWAG00000016386) #28	RDH14 (ENSCWAG00000016353) #29	KCNS3 (ENSCWAG00000016339) #30	MSGN1 (ENSCWAG00000016325) #31	GEN1 (ENSCWAG00000016234) #32	SMC6 (ENSCWAG00000016171) #33	VSNL1 (ENSCWAG00000016143) #34	RAD51AP2 (ENSCWAG00000016094)	CYRIA (ENSCWAG00000016027) #36	MYCN (ENSCWAG00000015961) #37
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Greater horseshoe bat	MODERN SPECIES	4	SF3B6 (ENSRFEG00010018003) #8	FKBP1B (ENSRFEG00010018043) #9	WDCP (ENSRFEG00010018155) #10	MFSD2B (ENSRFEG00010005251) #11	UBXN2A (ENSRFEG00010005270) #12	ATAD2B (ENSRFEG00010005280) #13	KLHL29 (ENSRFEG00010005296) #14	ENSRFEG00010005311	APOB (ENSRFEG00010005349) #15	LDAH (ENSRFEG00010005397) #16	GDF7 (ENSRFEG00010005440) #17	HS1BP3 (ENSRFEG00010005461) #18	RHOB (ENSRFEG00010005478) #19	PUM2 (ENSRFEG00010005562) #21	ENSRFEG00010005671	SDC1 (ENSRFEG00010005688) #22	LAPTM4A (ENSRFEG00010005720) #23	MATN3 (ENSRFEG00010005757) #24	WDR35 (ENSRFEG00010005857) #25	TTC32 (ENSRFEG00010005945) #26	OSR1 (ENSRFEG00010005966) #27	NT5C1B (ENSRFEG00010006003) #28	RDH14 (ENSRFEG00010006059) #29	KCNS3 (ENSRFEG00010006076) #30	MSGN1 (ENSRFEG00010006094) #31	GEN1 (ENSRFEG00010006120) #32	SMC6 (ENSRFEG00010006174) #33	VSNL1 (ENSRFEG00010006243) #34	RAD51AP2 (ENSRFEG00010006267)	CYRIA (ENSRFEG00010006289) #36	MYCN (ENSRFEG00010006325) #37
Microbat	MODERN SPECIES	1031	ENSMLUG00000030749	ENSMLUG00000013466 #11	UBXN2A (ENSMLUG00000015640) #12	ATAD2B (ENSMLUG00000004476) #13	KLHL29 (ENSMLUG00000004470) #14	TDRD15 (ENSMLUG00000007897)	APOB (ENSMLUG00000007812) #15	ENSMLUG00000029392	LDAH (ENSMLUG00000007792) #16	ENSMLUG00000027645 #17	HS1BP3 (ENSMLUG00000022201) #18	ENSMLUG00000005981	RHOB (ENSMLUG00000001627) #19	ENSMLUG00000023764 ##20	PUM2 (ENSMLUG00000007362) #21	SDC1 (ENSMLUG00000007349) #22	LAPTM4A (ENSMLUG00000001596) #23	MATN3 (ENSMLUG00000003456) #24	WDR35 (ENSMLUG00000001419) #25	TTC32 (ENSMLUG00000001415) #26	OSR1 (ENSMLUG00000011374) #27	NT5C1B (ENSMLUG00000015910) #28	RDH14 (ENSMLUG00000024368) #29
Megabat	MODERN SPECIES	2734															PUM2 (ENSPVAG00000002920) #21	SDC1 (ENSPVAG00000002916) #22	LAPTM4A (ENSPVAG00000002909) #23	MATN3 (ENSPVAG00000002905) #24	WDR35 (ENSPVAG00000002899) #25	TTC32 (ENSPVAG00000002897) #26
Equus	ANCESTRAL SPECIES	7	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000170401	ENSGT01100000265002	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT01090000263317.a	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Donkey	MODERN SPECIES	26	UBXN2A (ENSEASG00005009983) #12	ATAD2B (ENSEASG00005009516) #13	KLHL29 (ENSEASG00005009482) #14	ENSEASG00005009479	ENSEASG00005009477	ENSEASG00005009474	TDRD15 (ENSEASG00005034301)	APOB (ENSEASG00005009466) #15	LDAH (ENSEASG00005009459) #16	GDF7 (ENSEASG00005009457) #17	HS1BP3 (ENSEASG00005009454) #18	RHOB (ENSEASG00005009448) #19	ENSEASG00005027331	ENSEASG00005009442 ##20	PUM2 (ENSEASG00005009429) #21	SDC1 (ENSEASG00005009418) #22	LAPTM4A (ENSEASG00005009414) #23	MATN3 (ENSEASG00005009408) #24	WDR35 (ENSEASG00005009400) #25	TTC32 (ENSEASG00005026368) #26	OSR1 (ENSEASG00005009388) #27	NT5C1B (ENSEASG00005009376) #28	RDH14 (ENSEASG00005029880) #29	KCNS3 (ENSEASG00005009368) #30	MSGN1 (ENSEASG00005009364) #31	GEN1 (ENSEASG00005023619) #32	SMC6 (ENSEASG00005009355) #33	VSNL1 (ENSEASG00005026430) #34	RAD51AP2 (ENSEASG00005009350)	CYRIA (ENSEASG00005009344) #36	MYCN (ENSEASG00005037158) #37
Horse	MODERN SPECIES	6	ENSECAG00000033565	ENSECAG00000038636	ENSECAG00000032306	ENSECAG00000034152	TDRD15 (ENSECAG00000008581)	APOB (ENSECAG00000008600) #15	LDAH (ENSECAG00000020412) #16	ENSECAG00000058266	GDF7 (ENSECAG00000021083) #17	HS1BP3 (ENSECAG00000021502) #18	RHOB (ENSECAG00000051165) #19	ENSECAG00000032315	ENSECAG00000021922 ##20	PUM2 (ENSECAG00000021930) #21	ENSECAG00000045674	SDC1 (ENSECAG00000014709) #22	MATN3 (ENSECAG00000017085) #24	WDR35 (ENSECAG00000018258) #25	TTC32 (ENSECAG00000013048) #26	OSR1 (ENSECAG00000013593) #27	NT5C1B (ENSECAG00000014033) #28	RDH14 (ENSECAG00000045905) #29	KCNS3 (ENSECAG00000019779) #30	MSGN1 (ENSECAG00000002724) #31	GEN1 (ENSECAG00000020295) #32	SMC6 (ENSECAG00000022265) #33	VSNL1 (ENSECAG00000013682) #34	RAD51AP2 (ENSECAG00000014706)	CYRIA (ENSECAG00000014952) #36	ENSECAG00000018361	MYCN (ENSECAG00000002896) #37
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b.c #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Panthera	ANCESTRAL SPECIES	2	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00390000003628.b	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b.k.a #19	ENSGT00950000182945.b.a.a.b.b.b.l #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b.c #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00390000003628.b	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b.k.a #19	ENSGT00950000182945.b.a.a.b.b.b.l #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b.c #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
lion	MODERN SPECIES	3	WDCP (ENSPLOG00000000585) #10	MFSD2B (ENSPLOG00000000549) #11	UBXN2A (ENSPLOG00000000531) #12	ATAD2B (ENSPLOG00000000487) #13	KLHL29 (ENSPLOG00000000329) #14	ENSPLOG00000000267	TDRD15 (ENSPLOG00000000249)	APOB (ENSPLOG00000004809) #15	LDAH (ENSPLOG00000004752) #16	GDF7 (ENSPLOG00000004729) #17	HS1BP3 (ENSPLOG00000004714) #18	RHOB (ENSPLOG00000004676) #19	ENSPLOG00000004582 ##20	PUM2 (ENSPLOG00000004537) #21	ENSPLOG00000004519	SDC1 (ENSPLOG00000004513) #22	ENSPLOG00000004505 #23	MATN3 (ENSPLOG00000004487) #24	WDR35 (ENSPLOG00000004441) #25	TTC32 (ENSPLOG00000004421) #26	OSR1 (ENSPLOG00000004407) #27	NT5C1B (ENSPLOG00000004380) #28	RDH14 (ENSPLOG00000004360) #29	KCNS3 (ENSPLOG00000004351) #30	MSGN1 (ENSPLOG00000004343) #31	GEN1 (ENSPLOG00000004334) #32	SMC6 (ENSPLOG00000004301) #33	VSNL1 (ENSPLOG00000004292) #34	RAD51AP2 (ENSPLOG00000004282)	CYRIA (ENSPLOG00000004262) #36	ENSPLOG00000004254
leopard	MODERN SPECIES		UBXN2A (ENSPPRG00000022151) #12	ATAD2B (ENSPPRG00000022083) #13	KLHL29 (ENSPPRG00000022044) #14	ENSPPRG00000021990	ENSPPRG00000021960	TDRD15 (ENSPPRG00000020099)	APOB (ENSPPRG00000021875) #15	LDAH (ENSPPRG00000021658) #16	GDF7 (ENSPPRG00000021614) #17	HS1BP3 (ENSPPRG00000021577) #18	ENSPPRG00000021519 #19	ENSPPRG00000020084 #19	ENSPPRG00000021503 ##20	PUM2 (ENSPPRG00000021443) #21	ENSPPRG00000021380	SDC1 (ENSPPRG00000021362) #22	LAPTM4A (ENSPPRG00000021333) #23	MATN3 (ENSPPRG00000021301) #24	WDR35 (ENSPPRG00000021186) #25	TTC32 (ENSPPRG00000021136) #26	OSR1 (ENSPPRG00000021067) #27	NT5C1B (ENSPPRG00000021030) #28	RDH14 (ENSPPRG00000020986) #29	KCNS3 (ENSPPRG00000020060) #30	ENSPPRG00000020962	MSGN1 (ENSPPRG00000020043) #31	GEN1 (ENSPPRG00000020921) #32	SMC6 (ENSPPRG00000020812) #33	VSNL1 (ENSPPRG00000020771) #34	RAD51AP2 (ENSPPRG00000020727)	CYRIA (ENSPPRG00000020692) #36
Tiger	MODERN SPECIES	149	WDCP (ENSPTIG00000011327) #10	MFSD2B (ENSPTIG00000008501) #11	UBXN2A (ENSPTIG00000006975) #12	ATAD2B (ENSPTIG00000020553) #13	KLHL29 (ENSPTIG00000019549) #14	ENSPTIG00000018573	TDRD15 (ENSPTIG00000006858)	ENSPTIG00000017235	APOB (ENSPTIG00000012825) #15	LDAH (ENSPTIG00000011369) #16	HS1BP3 (ENSPTIG00000010200) #18	RHOB (ENSPTIG00000006084) #19	ENSPTIG00000000251 ##20	PUM2 (ENSPTIG00000018982) #21	ENSPTIG00000018625	SDC1 (ENSPTIG00000017404) #22	LAPTM4A (ENSPTIG00000016492) #23	MATN3 (ENSPTIG00000015261) #24	WDR35 (ENSPTIG00000012685) #25	TTC32 (ENSPTIG00000012474) #26	OSR1 (ENSPTIG00000012004) #27	NT5C1B (ENSPTIG00000011201) #28	RDH14 (ENSPTIG00000010724) #29	KCNS3 (ENSPTIG00000006472) #30	MSGN1 (ENSPTIG00000006467) #31	GEN1 (ENSPTIG00000007224) #32	SMC6 (ENSPTIG00000001154) #33	VSNL1 (ENSPTIG00000020980) #34	RAD51AP2 (ENSPTIG00000020726)	CYRIA (ENSPTIG00000019497) #36	ENSPTIG00000018921 #37
Cat	MODERN SPECIES	2	ENSFCAG00000040740 #9	WDCP (ENSFCAG00000004303) #10	MFSD2B (ENSFCAG00000004302) #11	UBXN2A (ENSFCAG00000028218) #12	ATAD2B (ENSFCAG00000030573) #13	KLHL29 (ENSFCAG00000003613) #14	TDRD15 (ENSFCAG00000035443)	APOB (ENSFCAG00000029807) #15	LDAH (ENSFCAG00000026226) #16	GDF7 (ENSFCAG00000044521) #17	HS1BP3 (ENSFCAG00000002398) #18	ENSFCAG00000048458 ##20	ENSFCAG00000028084 ##20	PUM2 (ENSFCAG00000027520) #21	ENSFCAG00000039293	SDC1 (ENSFCAG00000005354) #22	ENSFCAG00000043657 #23	MATN3 (ENSFCAG00000033314) #24	WDR35 (ENSFCAG00000005351) #25	TTC32 (ENSFCAG00000037766) #26	OSR1 (ENSFCAG00000026754) #27	NT5C1B (ENSFCAG00000010773) #28	KCNS3 (ENSFCAG00000014253) #30	MSGN1 (ENSFCAG00000045777) #31	GEN1 (ENSFCAG00000013581) #32	SMC6 (ENSFCAG00000013578) #33	VSNL1 (ENSFCAG00000023416) #34	RAD51AP2 (ENSFCAG00000028900)	CYRIA (ENSFCAG00000004125) #36	MYCN (ENSFCAG00000043374) #37	ENSFCAG00000048673
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Canidae	ANCESTRAL SPECIES	46	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00940000153609.b.w.b	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00980000202730	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00940000153609.b.w.b	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00980000202730	ENSGT00980000202468	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Dingo	MODERN SPECIES	223	MFSD2B (ENSCAFG00020025582) #11	ENSCAFG00020025601 #12	ATAD2B (ENSCAFG00020025604) #13	ENSCAFG00020025616	KLHL29 (ENSCAFG00020025619) #14	TDRD15 (ENSCAFG00020025627)	APOB (ENSCAFG00020025649) #15	LDAH (ENSCAFG00020025670) #16	GDF7 (ENSCAFG00020025671) #17	HS1BP3 (ENSCAFG00020025673) #18	RHOB (ENSCAFG00020025677) #19	ENSCAFG00020025680 #20	ENSCAFG00020025683 ##20	PUM2 (ENSCAFG00020025689) #21	ENSCAFG00020025758	SDC1 (ENSCAFG00020025760) #22	LAPTM4A (ENSCAFG00020025761) #23	WDR35 (ENSCAFG00020025847) #25	TTC32 (ENSCAFG00020026024) #26	OSR1 (ENSCAFG00020026025) #27	NT5C1B (ENSCAFG00020026028) #28	RDH14 (ENSCAFG00020026035) #29	ENSCAFG00020026037	KCNS3 (ENSCAFG00020026039) #30	MSGN1 (ENSCAFG00020026040) #31	ENSCAFG00020026044 #32	ENSCAFG00020026045 #32	ENSCAFG00020026046	ENSCAFG00020026047	VSNL1 (ENSCAFG00020026051) #34	RAD51AP2 (ENSCAFG00020026058)
Dog	MODERN SPECIES	8	FKBP1B (ENSCAFG00845022652) #9	WDCP (ENSCAFG00845022467) #10	ENSCAFG00845022118 #11	ENSCAFG00845021952 #12	ENSCAFG00845021908	ATAD2B (ENSCAFG00845021031) #13	KLHL29 (ENSCAFG00845020825) #14	TDRD15 (ENSCAFG00845020461)	APOB (ENSCAFG00845020315) #15	LDAH (ENSCAFG00845020079) #16	GDF7 (ENSCAFG00845020009) #17	HS1BP3 (ENSCAFG00845019848) #18	RHOB (ENSCAFG00845019784) #19	ENSCAFG00845019715 ##20	PUM2 (ENSCAFG00845018880) #21	SDC1 (ENSCAFG00845018675) #22	MATN3 (ENSCAFG00845018598) #23	MATN3 (ENSCAFG00845018475) #24	WDR35 (ENSCAFG00845017734) #25	TTC32 (ENSCAFG00845017602) #26	OSR1 (ENSCAFG00845017551) #27	NT5C1B (ENSCAFG00845017369) #28	NT5C1B (ENSCAFG00845017330) #29	ENSCAFG00845017291	ENSCAFG00845017269	KCNS3 (ENSCAFG00845017227) #30	MSGN1 (ENSCAFG00845017161) #31	GEN1 (ENSCAFG00845017081) #32	SMC6 (ENSCAFG00845016537) #33	VSNL1 (ENSCAFG00845016286) #34	RAD51AP2 (ENSCAFG00845016237)
Red fox	MODERN SPECIES	107		UBXN2A (ENSVVUG00000014898) #12	ENSVVUG00000014896	ATAD2B (ENSVVUG00000014891) #13	KLHL29 (ENSVVUG00000014884) #14	ENSVVUG00000014880	TDRD15 (ENSVVUG00000014860)	APOB (ENSVVUG00000014850) #15	LDAH (ENSVVUG00000014846) #16	HS1BP3 (ENSVVUG00000014842) #18	RHOB (ENSVVUG00000014839) #19	ENSVVUG00000014838 ##20	ENSVVUG00000014837 ##20	PUM2 (ENSVVUG00000014829) #21	ENSVVUG00000014826	SDC1 (ENSVVUG00000014823) #22	LAPTM4A (ENSVVUG00000014821) #23	MATN3 (ENSVVUG00000014820) #24	WDR35 (ENSVVUG00000014818) #25	ENSVVUG00000014817 #26	OSR1 (ENSVVUG00000014812) #27	NT5C1B (ENSVVUG00000014799) #28	RDH14 (ENSVVUG00000014797) #29	ENSVVUG00000014794	KCNS3 (ENSVVUG00000014792) #30	MSGN1 (ENSVVUG00000014790) #31	GEN1 (ENSVVUG00000014785) #32	SMC6 (ENSVVUG00000013308) #33	VSNL1 (ENSVVUG00000013234) #34	RAD51AP2 (ENSVVUG00000013222)	ENSVVUG00000013219
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Mustelinae	ANCESTRAL SPECIES	55	ENSGT00390000005908.y #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
American mink	MODERN SPECIES	7	ATAD2B (ENSNVIG00000012717) #13	KLHL29 (ENSNVIG00000012776) #14	ENSNVIG00000012791	ENSNVIG00000012796	TDRD15 (ENSNVIG00000012820)	APOB (ENSNVIG00000012830) #15	B5MDU6 (ENSNVIG00000012863) #16	ENSNVIG00000012897 #17	ENSNVIG00000012914 #17	ENSNVIG00000012923 #18	RHOB (ENSNVIG00000012943) #19	ENSNVIG00000012955 ##20	PUM2 (ENSNVIG00000013016) #21	ENSNVIG00000013176	ENSNVIG00000013188	SDC1 (ENSNVIG00000013190) #22	LAPTM4A (ENSNVIG00000013199) #23	MATN3 (ENSNVIG00000013221) #24	WDR35 (ENSNVIG00000013269) #25	TTC32 (ENSNVIG00000013413) #26	OSR1 (ENSNVIG00000013439) #27	ENSNVIG00000013455	NT5C1B (ENSNVIG00000013468) #28	RDH14 (ENSNVIG00000013495) #29	KCNS3 (ENSNVIG00000013506) #30	ENSNVIG00000013510	MSGN1 (ENSNVIG00000013513) #31	GEN1 (ENSNVIG00000013515) #32	ENSNVIG00000013543	VSNL1 (ENSNVIG00000013664) #34	RAD51AP2 (ENSNVIG00000013682)
Ferret	MODERN SPECIES	178	SF3B6 (ENSMPUG00000013957) #8	FKBP1B (ENSMPUG00000013941) #9	WDCP (ENSMPUG00000013937) #10	MFSD2B (ENSMPUG00000013875) #11	UBXN2A (ENSMPUG00000013862) #12	ATAD2B (ENSMPUG00000013855) #13	KLHL29 (ENSMPUG00000013755) #14	TDRD15 (ENSMPUG00000013753)	APOB (ENSMPUG00000013749) #15	LDAH (ENSMPUG00000013748) #16	GDF7 (ENSMPUG00000013742) #17	HS1BP3 (ENSMPUG00000013739) #18	RHOB (ENSMPUG00000019487) #19	ENSMPUG00000013736 ##20	PUM2 (ENSMPUG00000013734) #21	SDC1 (ENSMPUG00000013732) #22	LAPTM4A (ENSMPUG00000013714) #23	MATN3 (ENSMPUG00000013713) #24	WDR35 (ENSMPUG00000013708) #25	TTC32 (ENSMPUG00000013701) #26	OSR1 (ENSMPUG00000013697) #27	NT5C1B (ENSMPUG00000013662) #28	RDH14 (ENSMPUG00000013659) #29	KCNS3 (ENSMPUG00000019486) #30	MSGN1 (ENSMPUG00000019484) #31	GEN1 (ENSMPUG00000013651) #32	SMC6 (ENSMPUG00000013644) #33	VSNL1 (ENSMPUG00000013641) #34	RAD51AP2 (ENSMPUG00000013634)	ENSMPUG00000013627	CYRIA (ENSMPUG00000013624) #36
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b.d #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b.f #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Giant Panda	MODERN SPECIES	14	FKBP1B (ENSAMEG00000029795) #9	WDCP (ENSAMEG00000002801) #10	MFSD2B (ENSAMEG00000002807) #11	UBXN2A (ENSAMEG00000002843) #12	ATAD2B (ENSAMEG00000002853) #13	KLHL29 (ENSAMEG00000002886) #14	TDRD15 (ENSAMEG00000029907)	APOB (ENSAMEG00000013086) #15	LDAH (ENSAMEG00000029431) #16	ENSAMEG00000002904 #17	ENSAMEG00000025415 #18	RHOB (ENSAMEG00000019884) #19	ENSAMEG00000002884 ##20	PUM2 (ENSAMEG00000002823) #21	ENSAMEG00000025209	SDC1 (ENSAMEG00000002804) #22	LAPTM4A (ENSAMEG00000002787) #23	MATN3 (ENSAMEG00000002771) #24	WDR35 (ENSAMEG00000002724) #25	TTC32 (ENSAMEG00000002717) #26	OSR1 (ENSAMEG00000002708) #27	NT5C1B (ENSAMEG00000002686) #28	KCNS3 (ENSAMEG00000019878) #30	MSGN1 (ENSAMEG00000019874) #31	GEN1 (ENSAMEG00000002666) #32	SMC6 (ENSAMEG00000002654) #33	VSNL1 (ENSAMEG00000011624) #34	RAD51AP2 (ENSAMEG00000002644)	ENSAMEG00000002627	CYRIA (ENSAMEG00000001040) #36	ENSAMEG00000023555
Ursus	ANCESTRAL SPECIES	27	ENSGT00390000005908.y #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b.d #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b.f #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00950000185985
Polar bear	MODERN SPECIES	223	TP53I3 (ENSUMAG00000022832) #7	SF3B6 (ENSUMAG00000022835) #8	ENSUMAG00000022839	WDCP (ENSUMAG00000022841) #10	MFSD2B (ENSUMAG00000022848) #11	UBXN2A (ENSUMAG00000022883) #12	ATAD2B (ENSUMAG00000022911) #13	KLHL29 (ENSUMAG00000023015) #14	TDRD15 (ENSUMAG00000023037)	APOB (ENSUMAG00000023043) #15	LDAH (ENSUMAG00000023067) #16	ENSUMAG00000023070 #18	ENSUMAG00000023094 ##20	PUM2 (ENSUMAG00000023198) #21	ENSUMAG00000023203	ENSUMAG00000023205 #22	LAPTM4A (ENSUMAG00000023207) #23	MATN3 (ENSUMAG00000023214) #24	WDR35 (ENSUMAG00000023232) #25	TTC32 (ENSUMAG00000023371) #26	OSR1 (ENSUMAG00000023373) #27	NT5C1B (ENSUMAG00000023377) #28	RDH14 (ENSUMAG00000023381) #29	KCNS3 (ENSUMAG00000023389) #30	MSGN1 (ENSUMAG00000023391) #31	GEN1 (ENSUMAG00000023394) #32	SMC6 (ENSUMAG00000023406) #33	VSNL1 (ENSUMAG00000023419) #34	RAD51AP2 (ENSUMAG00000023423)	CYRIA (ENSUMAG00000023433) #36	ENSUMAG00000023440
American black bear	MODERN SPECIES	149														PUM2 (ENSUAMG00000008120) #21	ENSUAMG00000008099	SDC1 (ENSUAMG00000008096) #22	LAPTM4A (ENSUAMG00000008094) #23	ENSUAMG00000008091 #24	WDR35 (ENSUAMG00000007366) #25	TTC32 (ENSUAMG00000007348) #26
Atlantogenata	ANCESTRAL SPECIES	14	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Xenarthra	ANCESTRAL SPECIES	1388														ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22
Armadillo	MODERN SPECIES	2649														ENSDNOG00000031941 ##20	PUM2 (ENSDNOG00000006733) #21	SDC1 (ENSDNOG00000031824) #22
Afrotheria	ANCESTRAL SPECIES	26	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Afrotheria_a	ANCESTRAL SPECIES	26	ENSGT00940000161217 #7	ENSGT00390000005908 #8	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Elephant	MODERN SPECIES	197	TP53I3 (ENSLAFG00000017221) #7	SF3B6 (ENSLAFG00000029423) #8	FKBP1B (ENSLAFG00000005196) #9	WDCP (ENSLAFG00000017499) #10	MFSD2B (ENSLAFG00000023340) #11	UBXN2A (ENSLAFG00000017493) #12	ATAD2B (ENSLAFG00000016605) #13	KLHL29 (ENSLAFG00000013813) #14	TDRD15 (ENSLAFG00000026920)	APOB (ENSLAFG00000009232) #15	GDF7 (ENSLAFG00000021797) #17	HS1BP3 (ENSLAFG00000013276) #18	RHOB (ENSLAFG00000000243) #19	ENSLAFG00000030177 ##20	PUM2 (ENSLAFG00000009278) #21	SDC1 (ENSLAFG00000022920) #22	LAPTM4A (ENSLAFG00000013774) #23	MATN3 (ENSLAFG00000014853) #24	WDR35 (ENSLAFG00000014834) #25	TTC32 (ENSLAFG00000014830) #26	ENSLAFG00000030361	ENSLAFG00000027572	OSR1 (ENSLAFG00000027174) #27	NT5C1B (ENSLAFG00000007746) #28	RDH14 (ENSLAFG00000022569) #29	KCNS3 (ENSLAFG00000021521) #30	ENSLAFG00000028092	ENSLAFG00000029496	MSGN1 (ENSLAFG00000015319) #31	GEN1 (ENSLAFG00000023255) #32	SMC6 (ENSLAFG00000007506) #33
Hyrax	MODERN SPECIES	1351																SDC1 (ENSPCAG00000016237) #22
Tenrec	MODERN SPECIES	1678														PUM2 (ENSETEG00000017683) #21	ENSETEG00000017680	SDC1 (ENSETEG00000017678) #22
Marsupialia	ANCESTRAL SPECIES	35	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688.s #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a.f #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660 #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688.s #16	ENSGT00940000160140.b #17	ENSGT00390000013092.b #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a.f #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Diprotodontia	ANCESTRAL SPECIES	35							ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688.s #16	ENSGT00940000160140.b #17	ENSGT00390000013092.b #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a.f #33	ENSGT00940000156513 #34	ENSGT00960000192062	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Diprotodontia_a	ANCESTRAL SPECIES	34							ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688.s #16	ENSGT00940000160140.b #17	ENSGT00390000013092.b #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a.f #33	ENSGT00940000156513 #34	ENSGT00960000192062	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Common wonbat	MODERN SPECIES	694												RHOB (ENSVURG00010023826) #19	ENSVURG00010023821 ##20	PUM2 (ENSVURG00010023817) #21	ENSVURG00010023816	ENSVURG00010023814 #22	LAPTM4A (ENSVURG00010023811) #23	WDR35 (ENSVURG00010023804) #25	TTC32 (ENSVURG00010023802) #26	ENSVURG00010023800 #27	ENSVURG00010023796 #28	RDH14 (ENSVURG00010023793) #29	KCNS3 (ENSVURG00010023790) #30	MSGN1 (ENSVURG00010023787) #31	GEN1 (ENSVURG00010023780) #32	ENSVURG00010023775 #33	VSNL1 (ENSVURG00010023772) #34	CYRIA (ENSVURG00010023771) #36	MYCN (ENSVURG00010023760) #37	DDX1 (ENSVURG00010023755)	NBAS (ENSVURG00010023744)
koala	MODERN SPECIES	175							TDRD15 (ENSPCIG00000007414)	APOB (ENSPCIG00000008641) #15	ENSPCIG00000022174 #16	GDF7 (ENSPCIG00000036380) #17	ENSPCIG00000022157 #18	RHOB (ENSPCIG00000036417) #19	ENSPCIG00000022147 ##20	PUM2 (ENSPCIG00000022139) #21	ENSPCIG00000022138	ENSPCIG00000035866 #22	LAPTM4A (ENSPCIG00000016629) #23	MATN3 (ENSPCIG00000016627) #24	ENSPCIG00000022097 #25	TTC32 (ENSPCIG00000035406) #26	OSR1 (ENSPCIG00000011035) #27	ENSPCIG00000016776 #28	RDH14 (ENSPCIG00000024554) #29	KCNS3 (ENSPCIG00000029436) #30	MSGN1 (ENSPCIG00000029437) #31	ENSPCIG00000029438 #32	ENSPCIG00000029439 #33	VSNL1 (ENSPCIG00000029441) #34	ENSPCIG00000035261	CYRIA (ENSPCIG00000010035) #36	ENSPCIG00000001358
Opossum	MODERN SPECIES	579																ENSMODG00000036381 #22
Platypus	MODERN SPECIES	20	ZSWIM2 (ENSOANG00000030404)	CALCRL (ENSOANG00000020803)	ENSOANG00000046127	ENSOANG00000036826 #26	ENSOANG00000041695 #26	APMAP (ENSOANG00000038065)	ENSOANG00000040205	ACSS1 (ENSOANG00000003805)	ENSOANG00000046868	ENTPD6 (ENSOANG00000021164)	PYGB (ENSOANG00000009608)	ABHD12 (ENSOANG00000042191)	GINS1 (ENSOANG00000004118)	ENSOANG00000039988	PUM2 (ENSOANG00000005907) #21	ENSOANG00000001136 #22	LAPTM4A (ENSOANG00000001105) #23	MATN3 (ENSOANG00000037447) #24	WDR35 (ENSOANG00000047974) #25	RHOB (ENSOANG00000008835) #19	ENSOANG00000004402 #18	ENSOANG00000015095 ##17	LDAH (ENSOANG00000020206) #16	APOB (ENSOANG00000003378) #15	ENSOANG00000047651	KLHL29 (ENSOANG00000007620) #14	ATAD2B (ENSOANG00000007622) #13	UBXN2A (ENSOANG00000042505) #12	MFSD2B (ENSOANG00000007625) #11	ENSOANG00000007626 #10	ENSOANG00000048768 #9
Sauria	ANCESTRAL SPECIES	1	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000177852	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Lepidosauria	ANCESTRAL SPECIES		ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00960000192062	ENSGT00390000015159.a.b #36
Episquamata	ANCESTRAL SPECIES		ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155745 #25	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00960000192062	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000153311.a.b.b #9	ENSGT00390000001660.f #10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155745 #25	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37	ENSGT00940000155678
Common wall lizard	MODERN SPECIES	11	FKBP1B (ENSPMRG00000010400) #9	ENSPMRG00000010389 #10	WDCP (ENSPMRG00000010386) #10	MFSD2B (ENSPMRG00000010373) #11	UBXN2A (ENSPMRG00000010363) #12	ATAD2B (ENSPMRG00000010349) #13	KLHL29 (ENSPMRG00000010337) #14	TDRD15 (ENSPMRG00000010330)	APOB (ENSPMRG00000010317) #15	LDAH (ENSPMRG00000010307) #16	GDF7 (ENSPMRG00000010304) #17	HS1BP3 (ENSPMRG00000010298) #18	RHOB (ENSPMRG00000010292) #19	ENSPMRG00000010287 ##20	PUM2 (ENSPMRG00000010266) #21	SDC1 (ENSPMRG00000002406) #22	MATN3 (ENSPMRG00000002396) #24	LAPTM4A (ENSPMRG00000002388) #23	TTC32 (ENSPMRG00000002380) #26	ENSPMRG00000002372	OSR1 (ENSPMRG00000002362) #27	NT5C1B (ENSPMRG00000002348) #28	RDH14 (ENSPMRG00000002345) #29	WDR35 (ENSPMRG00000002308) #25	KCNS3 (ENSPMRG00000002300) #30	GEN1 (ENSPMRG00000002288) #32	SMC6 (ENSPMRG00000002270) #33	VSNL1 (ENSPMRG00000002266) #34	ENSPMRG00000002261	ENSPMRG00000002259	ENSPMRG00000002256
Argentine black and white tegu	MODERN SPECIES	9	ATAD2B (ENSSMRG00000004856) #13	KLHL29 (ENSSMRG00000004808) #14	ENSSMRG00000004685	ENSSMRG00000004607	ENSSMRG00000004598	ENSSMRG00000004589	ENSSMRG00000004548	TDRD15 (ENSSMRG00000004493)	APOB (ENSSMRG00000004486) #15	LDAH (ENSSMRG00000004454) #16	GDF7 (ENSSMRG00000004428) #17	HS1BP3 (ENSSMRG00000004424) #18	RHOB (ENSSMRG00000004413) #19	ENSSMRG00000004410 ##20	PUM2 (ENSSMRG00000004387) #21	SDC1 (ENSSMRG00000004375) #22	LAPTM4A (ENSSMRG00000004329) #23	TTC32 (ENSSMRG00000004326) #26	ENSSMRG00000004320	OSR1 (ENSSMRG00000004296) #27
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155745 #25	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00960000192062	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37
Elapidae	ANCESTRAL SPECIES		ENSGT00390000001660.f #10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155745 #25	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a.c #33	ENSGT00940000156513 #34	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37	ENSGT00940000155678
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00390000001660.f #10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181.a #29	ENSGT00940000155745 #25	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266.e #32	ENSGT00550000074816.A.a.c #33	ENSGT00940000156513 #34	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37	ENSGT00940000155678	ENSGT00390000012474
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00390000001660.f #10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181.a #29	ENSGT00940000155745 #25	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266.e #32	ENSGT00550000074816.A.a.c #33	ENSGT00940000156513 #34	ENSGT00390000015159.a.b #36	ENSGT00940000158432 #37	ENSGT00940000155678
Eastern brown snake	MODERN SPECIES	4							TDRD15 (ENSPTXG00000014579)	APOB (ENSPTXG00000014575) #15	LDAH (ENSPTXG00000014573) #16	ENSPTXG00000014571	GDF7 (ENSPTXG00000014569) #17	HS1BP3 (ENSPTXG00000014568) #18	RHOB (ENSPTXG00000014567) #19	ENSPTXG00000014566 ##20	PUM2 (ENSPTXG00000014565) #21	SDC1 (ENSPTXG00000014564) #22	LAPTM4A (ENSPTXG00000014563) #23	TTC32 (ENSPTXG00000014562) #26	ENSPTXG00000014561	OSR1 (ENSPTXG00000014560) #27	NT5C1B (ENSPTXG00000014559) #28	RDH14 (ENSPTXG00000014558) #29	WDR35 (ENSPTXG00000014548) #25	KCNS3 (ENSPTXG00000014540) #30	MSGN1 (ENSPTXG00000014539) #31	ENSPTXG00000014537 #32	ENSPTXG00000014536	SMC6 (ENSPTXG00000014533) #33	VSNL1 (ENSPTXG00000014531) #34	CYRIA (ENSPTXG00000014529) #36	MYCN (ENSPTXG00000014526) #37
Mainland tiger snake	MODERN SPECIES	74	ENSNSUG00000000616 #10	WDCP (ENSNSUG00000000620) #10	ENSNSUG00000000625 #11	UBXN2A (ENSNSUG00000000628) #12	ATAD2B (ENSNSUG00000000683) #13	KLHL29 (ENSNSUG00000000726) #14	TDRD15 (ENSNSUG00000000737)	APOB (ENSNSUG00000000739) #15	LDAH (ENSNSUG00000000742) #16	GDF7 (ENSNSUG00000000752) #17	ENSNSUG00000000756	HS1BP3 (ENSNSUG00000000758) #18	RHOB (ENSNSUG00000000761) #19	ENSNSUG00000000764 ##20	PUM2 (ENSNSUG00000000851) #21	SDC1 (ENSNSUG00000003733) #22	LAPTM4A (ENSNSUG00000003734) #23	TTC32 (ENSNSUG00000003736) #26	ENSNSUG00000003742	OSR1 (ENSNSUG00000003748) #27	NT5C1B (ENSNSUG00000003749) #28	RDH14 (ENSNSUG00000003758) #29	WDR35 (ENSNSUG00000003762) #25	KCNS3 (ENSNSUG00000003771) #30	MSGN1 (ENSNSUG00000003773) #31	GEN1 (ENSNSUG00000003777) #32	SMC6 (ENSNSUG00000003811) #33	VSNL1 (ENSNSUG00000005729) #34
Indian cobra	MODERN SPECIES		ENSNNAG00000009330 #10	WDCP (ENSNNAG00000009309) #10	MFSD2B (ENSNNAG00000009283) #11	UBXN2A (ENSNNAG00000009257) #12	ATAD2B (ENSNNAG00000007175) #13	KLHL29 (ENSNNAG00000007070) #14	TDRD15 (ENSNNAG00000007049)	APOB (ENSNNAG00000006325) #15	LDAH (ENSNNAG00000006227) #16	GDF7 (ENSNNAG00000006210) #17	HS1BP3 (ENSNNAG00000006192) #18	RHOB (ENSNNAG00000006172) #19	ENSNNAG00000005965 ##20	PUM2 (ENSNNAG00000005799) #21	ENSNNAG00000005775	ENSNNAG00000005759 #22	LAPTM4A (ENSNNAG00000005741) #23	TTC32 (ENSNNAG00000005721) #26	ENSNNAG00000005690	OSR1 (ENSNNAG00000005665) #27	NT5C1B (ENSNNAG00000005647) #28	RDH14 (ENSNNAG00000005638) #29	WDR35 (ENSNNAG00000005515) #25	KCNS3 (ENSNNAG00000005487) #30	MSGN1 (ENSNNAG00000005477) #31	ENSNNAG00000005468 #32	SMC6 (ENSNNAG00000005310) #33	VSNL1 (ENSNNAG00000005283) #34	ENSNNAG00000005266	ENSNNAG00000005240	CYRIA (ENSNNAG00000005209) #36
Lizard	MODERN SPECIES		MYOM2 (ENSACAG00000004962)	ENSACAG00000026290	CSMD1 (ENSACAG00000004617)	ENSACAG00000042265	TDRD15 (ENSACAG00000010836)	APOB (ENSACAG00000010692) #15	ENSACAG00000043263	LDAH (ENSACAG00000010680) #16	GDF7 (ENSACAG00000010676) #17	HS1BP3 (ENSACAG00000010669) #18	RHOB (ENSACAG00000010665) #19	ENSACAG00000042007	ENSACAG00000010614 ##20	PUM2 (ENSACAG00000010491) #21	ENSACAG00000041550	SDC1 (ENSACAG00000010489) #22	ENSACAG00000044127	LAPTM4A (ENSACAG00000014474) #23	TTC32 (ENSACAG00000014548) #26	ENSACAG00000014553	ENSACAG00000036133	ENSACAG00000003251	OSR1 (ENSACAG00000007059) #27	ENSACAG00000044400	NT5C1B (ENSACAG00000007066) #28	RDH14 (ENSACAG00000044389) #29	ENSACAG00000007095 #25	ENSACAG00000042353	ENSACAG00000044738	ENSACAG00000041381	ENSACAG00000037198
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000177852	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Archosauria	ANCESTRAL SPECIES	3	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Aves	ANCESTRAL SPECIES	10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Neognathae	ANCESTRAL SPECIES	2	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Anatidae	ANCESTRAL SPECIES		ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Pink-footed goose	MODERN SPECIES	453												RHOB (ENSABRG00000018900) #19	ENSABRG00000018907	ENSABRG00000018921 ##20	PUM2 (ENSABRG00000018939) #21	SDC1 (ENSABRG00000018944) #22
Duck	MODERN SPECIES	21	FKBP1B (ENSAPLG00000030383) #9	ENSAPLG00000013078 #10	WDCP (ENSAPLG00000013065) #10	MFSD2B (ENSAPLG00000012916) #11	ENSAPLG00000022593	UBXN2A (ENSAPLG00000012737) #12	ATAD2B (ENSAPLG00000012458) #13	KLHL29 (ENSAPLG00000012405) #14	TDRD15 (ENSAPLG00000017833)	APOB (ENSAPLG00000011670) #15	LDAH (ENSAPLG00000011591) #16	HS1BP3 (ENSAPLG00000011418) #18	RHOB (ENSAPLG00000011404) #19	ENSAPLG00000011262 ##20	PUM2 (ENSAPLG00000010496) #21	SDC1 (ENSAPLG00000010484) #22	ENSAPLG00000019338	LAPTM4A (ENSAPLG00000006688) #23	MATN3 (ENSAPLG00000006850) #24	WDR35 (ENSAPLG00000007231) #25	TTC32 (ENSAPLG00000007719) #26	ENSAPLG00000007727	OSR1 (ENSAPLG00000007971) #27	NT5C1B (ENSAPLG00000008001) #28	RDH14 (ENSAPLG00000008116) #29	KCNS3 (ENSAPLG00000001833) #30	ENSAPLG00000008127	MSGN1 (ENSAPLG00000001852) #31	GEN1 (ENSAPLG00000008596) #32	SMC6 (ENSAPLG00000008910) #33	VSNL1 (ENSAPLG00000010558) #34
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00390000001660.f #10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Japanese quail	MODERN SPECIES	21	ENSCJPG00005011704	ENSCJPG00005011703 #10	WDCP (ENSCJPG00005011702) #10	MFSD2B (ENSCJPG00005011701) #11	UBXN2A (ENSCJPG00005011700) #12	ATAD2B (ENSCJPG00005011679) #13	KLHL29 (ENSCJPG00005011667) #14	TDRD15 (ENSCJPG00005011633)	APOB (ENSCJPG00005011298) #15	LDAH (ENSCJPG00005011295) #16	GDF7 (ENSCJPG00005011294) #17	HS1BP3 (ENSCJPG00005011293) #18	RHOB (ENSCJPG00005011290) #19	ENSCJPG00005011289 ##20	PUM2 (ENSCJPG00005011284) #21	SDC1 (ENSCJPG00005011283) #22	LAPTM4A (ENSCJPG00005011281) #23	MATN3 (ENSCJPG00005011280) #24	WDR35 (ENSCJPG00005011144) #25	TTC32 (ENSCJPG00005011143) #26	ENSCJPG00005011142	OSR1 (ENSCJPG00005011136) #27	NT5C1B (ENSCJPG00005011122) #28	RDH14 (ENSCJPG00005011121) #29	ENSCJPG00005011119	MSGN1 (ENSCJPG00005011118) #31	GEN1 (ENSCJPG00005011117) #32	SMC6 (ENSCJPG00005011116) #33	VSNL1 (ENSCJPG00005011115) #34	ENSCJPG00005011113	CYRIA (ENSCJPG00005011106) #36
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00390000001660.f #10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500
Chicken	MODERN SPECIES	22	FKBP1B (ENSGALG00010008455) #9	ENSGALG00010009852 #10	WDCP (ENSGALG00010009806) #10	MFSD2B (ENSGALG00010009780) #11	UBXN2A (ENSGALG00010009712) #12	ATAD2B (ENSGALG00010009695) #13	KLHL29 (ENSGALG00010009650) #14	TDRD15 (ENSGALG00010007981)	APOB (ENSGALG00010007977) #15	LDAH (ENSGALG00010007963) #16	ENSGALG00010007948	HS1BP3 (ENSGALG00010007956) #18	RHOB (ENSGALG00010008046) #19	ENSGALG00010008042 ##20	PUM2 (ENSGALG00010008032) #21	SDC1 (ENSGALG00010007999) #22	LAPTM4A (ENSGALG00010007992) #23	MATN3 (ENSGALG00010002579) #24	WDR35 (ENSGALG00010002551) #25	TTC32 (ENSGALG00010002520) #26	ENSGALG00010002513	OSR1 (ENSGALG00010002500) #27	NT5C1B (ENSGALG00010003681) #28	RDH14 (ENSGALG00010003665) #29	KCNS3 (ENSGALG00010003438) #30	ZPAX (ENSGALG00010003469)	MSGN1 (ENSGALG00010003849) #31	GEN1 (ENSGALG00010002376) #32	SMC6 (ENSGALG00010002372) #33	VSNL1 (ENSGALG00010002364) #34	ENSGALG00010002344
Turkey	MODERN SPECIES	11	ENSMGAG00000014055 #10	WDCP (ENSMGAG00000014054) #10	MFSD2B (ENSMGAG00000014052) #11	UBXN2A (ENSMGAG00000014053) #12	ATAD2B (ENSMGAG00000014051) #13	KLHL29 (ENSMGAG00000014049) #14	TDRD15 (ENSMGAG00000014046)	APOB (ENSMGAG00000014045) #15	LDAH (ENSMGAG00000014044) #16	GDF7 (ENSMGAG00000015643) #17	HS1BP3 (ENSMGAG00000014042) #18	RHOB (ENSMGAG00000022411) #19	ENSMGAG00000015625	ENSMGAG00000014041 ##20	PUM2 (ENSMGAG00000014040) #21	SDC1 (ENSMGAG00000014039) #22	LAPTM4A (ENSMGAG00000014038) #23	MATN3 (ENSMGAG00000014036) #24	WDR35 (ENSMGAG00000014034) #25	TTC32 (ENSMGAG00000019538) #26	ENSMGAG00000014037	OSR1 (ENSMGAG00000014033) #27	NT5C1B (ENSMGAG00000014031) #28	RDH14 (ENSMGAG00000021183) #29	KCNS3 (ENSMGAG00000015620) #30	ENSMGAG00000014030	MSGN1 (ENSMGAG00000016374) #31	ENSMGAG00000014029 #32	SMC6 (ENSMGAG00000014028) #33	VSNL1 (ENSMGAG00000014027) #34	ENSMGAG00000021857
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Great tit	MODERN SPECIES	22	WDCP (ENSPMJG00000012954) #10	MFSD2B (ENSPMJG00000012953) #11	UBXN2A (ENSPMJG00000012952) #12	ATAD2B (ENSPMJG00000012951) #13	KLHL29 (ENSPMJG00000012950) #14	TDRD15 (ENSPMJG00000012942)	APOB (ENSPMJG00000012512) #15	LDAH (ENSPMJG00000012509) #16	ENSPMJG00000012508	GDF7 (ENSPMJG00000012507) #17	HS1BP3 (ENSPMJG00000012505) #18	RHOB (ENSPMJG00000012501) #19	ENSPMJG00000012500 ##20	PUM2 (ENSPMJG00000012498) #21	ENSPMJG00000012497	SDC1 (ENSPMJG00000012496) #22	ENSPMJG00000012495	LAPTM4A (ENSPMJG00000012494) #23	MATN3 (ENSPMJG00000012493) #24	WDR35 (ENSPMJG00000012492) #25	TTC32 (ENSPMJG00000012491) #26	ENSPMJG00000012490	OSR1 (ENSPMJG00000012488) #27	NT5C1B (ENSPMJG00000012484) #28	RDH14 (ENSPMJG00000012483) #29	KCNS3 (ENSPMJG00000012481) #30	MSGN1 (ENSPMJG00000012480) #31	GEN1 (ENSPMJG00000012479) #32	SMC6 (ENSPMJG00000012478) #33	VSNL1 (ENSPMJG00000012477) #34	ENSPMJG00000012476
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Flycatcher	MODERN SPECIES	21	UBXN2A (ENSFALG00000001681) #12	ENSFALG00000028837 #13	ENSFALG00000001684 #13	KLHL29 (ENSFALG00000001686) #14	ENSFALG00000026691	TDRD15 (ENSFALG00000025891)	APOB (ENSFALG00000001698) #15	LDAH (ENSFALG00000001713) #16	GDF7 (ENSFALG00000014848) #17	HS1BP3 (ENSFALG00000001718) #18	RHOB (ENSFALG00000014864) #19	ENSFALG00000001728 ##20	ENSFALG00000001759 #21	ENSFALG00000025154 #21	ENSFALG00000026224	SDC1 (ENSFALG00000001773) #22	ENSFALG00000021365	LAPTM4A (ENSFALG00000001775) #23	MATN3 (ENSFALG00000025667) #24	WDR35 (ENSFALG00000001777) #25	TTC32 (ENSFALG00000001778) #26	ENSFALG00000001780	OSR1 (ENSFALG00000028520) #27	NT5C1B (ENSFALG00000001786) #28	RDH14 (ENSFALG00000014908) #29	KCNS3 (ENSFALG00000014929) #30	MSGN1 (ENSFALG00000001820) #31	GEN1 (ENSFALG00000027943) #32	SMC6 (ENSFALG00000001824) #33	VSNL1 (ENSFALG00000027644) #34	ENSFALG00000001832
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00900000143081	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34
Zebra finch	MODERN SPECIES	23	FKBP1B (ENSTGUG00000013190) #9	ENSTGUG00000018392 #10	WDCP (ENSTGUG00000013189) #10	MFSD2B (ENSTGUG00000013188) #11	UBXN2A (ENSTGUG00000013185) #12	ATAD2B (ENSTGUG00000013179) #13	KLHL29 (ENSTGUG00000013176) #14	APOB (ENSTGUG00000013166) #15	LDAH (ENSTGUG00000013165) #16	GDF7 (ENSTGUG00000020444) #17	ENSTGUG00000013164	HS1BP3 (ENSTGUG00000013163) #18	RHOB (ENSTGUG00000019854) #19	ENSTGUG00000013159 ##20	PUM2 (ENSTGUG00000013149) #21	SDC1 (ENSTGUG00000013148) #22	ENSTGUG00000024330	LAPTM4A (ENSTGUG00000013146) #23	MATN3 (ENSTGUG00000013143) #24	WDR35 (ENSTGUG00000013136) #25	TTC32 (ENSTGUG00000013135) #26	ENSTGUG00000013130	OSR1 (ENSTGUG00000019377) #27	NT5C1B (ENSTGUG00000013129) #28	RDH14 (ENSTGUG00000013127) #29	KCNS3 (ENSTGUG00000013126) #30	ENSTGUG00000013124	MSGN1 (ENSTGUG00000013122) #31	VSNL1 (ENSTGUG00000013109) #34	GEN1 (ENSTGUG00000013117) #32	SMC6 (ENSTGUG00000013110) #33
Common canary	MODERN SPECIES	1	WDCP (ENSSCAG00000013913) #10	MFSD2B (ENSSCAG00000013911) #11	UBXN2A (ENSSCAG00000013905) #12	ATAD2B (ENSSCAG00000013891) #13	KLHL29 (ENSSCAG00000013870) #14	TDRD15 (ENSSCAG00000013836)	APOB (ENSSCAG00000013554) #15	LDAH (ENSSCAG00000013455) #16	ENSSCAG00000013452	GDF7 (ENSSCAG00000013449) #17	HS1BP3 (ENSSCAG00000013438) #18	RHOB (ENSSCAG00000013430) #19	ENSSCAG00000013425 ##20	PUM2 (ENSSCAG00000013402) #21	ENSSCAG00000013394	SDC1 (ENSSCAG00000013387) #22	ENSSCAG00000013381	LAPTM4A (ENSSCAG00000013378) #23	MATN3 (ENSSCAG00000013373) #24	WDR35 (ENSSCAG00000013365) #25	TTC32 (ENSSCAG00000013359) #26	ENSSCAG00000013351	OSR1 (ENSSCAG00000013326) #27	NT5C1B (ENSSCAG00000013290) #28	RDH14 (ENSSCAG00000013279) #29	KCNS3 (ENSSCAG00000013262) #30	MSGN1 (ENSSCAG00000013255) #31	GEN1 (ENSSCAG00000013242) #32	SMC6 (ENSSCAG00000013216) #33	VSNL1 (ENSSCAG00000013204) #34	ENSSCAG00000013192
Medium ground finch	MODERN SPECIES	21							TDRD15 (ENSGFOG00000010131)	APOB (ENSGFOG00000010155) #15	LDAH (ENSGFOG00000010320) #16	GDF7 (ENSGFOG00000010332) #17	HS1BP3 (ENSGFOG00000010343) #18	RHOB (ENSGFOG00000010348) #19	ENSGFOG00000010354 ##20	PUM2 (ENSGFOG00000010379) #21	ENSGFOG00000010411	SDC1 (ENSGFOG00000010416) #22	ENSGFOG00000010430	LAPTM4A (ENSGFOG00000010443) #23	MATN3 (ENSGFOG00000010458) #24	WDR35 (ENSGFOG00000010480) #25	ENSGFOG00000010484	OSR1 (ENSGFOG00000010486) #27	NT5C1B (ENSGFOG00000010490) #28	RDH14 (ENSGFOG00000010495) #29	KCNS3 (ENSGFOG00000010498) #30	GEN1 (ENSGFOG00000010501) #32	SMC6 (ENSGFOG00000010514) #33	VSNL1 (ENSGFOG00000010531) #34	CYRIA (ENSGFOG00000010538) #36	MYCN (ENSGFOG00000010546) #37	DDX1 (ENSGFOG00000010553)
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00950000185286	ENSGT00940000160140.b #17	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000180923	ENSGT00940000153446.b #23	ENSGT00940000157581 #24	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Golden eagle	MODERN SPECIES	6	WDCP (ENSACCG00020010661) #10	MFSD2B (ENSACCG00020010686) #11	UBXN2A (ENSACCG00020010703) #12	ATAD2B (ENSACCG00020010718) #13	KLHL29 (ENSACCG00020010747) #14	TDRD15 (ENSACCG00020010769)	APOB (ENSACCG00020010784) #15	LDAH (ENSACCG00020010799) #16	GDF7 (ENSACCG00020010813) #17	HS1BP3 (ENSACCG00020010832) #18	RHOB (ENSACCG00020010848) #19	ENSACCG00020010855	ENSACCG00020010869 ##20	PUM2 (ENSACCG00020010910) #21	ENSACCG00020010949	SDC1 (ENSACCG00020010958) #22	ENSACCG00020010982	LAPTM4A (ENSACCG00020011001) #23	MATN3 (ENSACCG00020011023) #24	WDR35 (ENSACCG00020011082) #25	ENSACCG00020011110	OSR1 (ENSACCG00020011118) #27	NT5C1B (ENSACCG00020011126) #28	RDH14 (ENSACCG00020011134) #29	KCNS3 (ENSACCG00020011140) #30	MSGN1 (ENSACCG00020011146) #31	GEN1 (ENSACCG00020011155) #32	SMC6 (ENSACCG00020011179) #33	VSNL1 (ENSACCG00020011201) #34	ENSACCG00020011205	CYRIA (ENSACCG00020011233) #36
Kakapo	MODERN SPECIES	23	ENSSHBG00005011092 #10	WDCP (ENSSHBG00005011059) #10	MFSD2B (ENSSHBG00005010986) #11	UBXN2A (ENSSHBG00005010922) #12	ATAD2B (ENSSHBG00005010123) #13	KLHL29 (ENSSHBG00005009964) #14	TDRD15 (ENSSHBG00005009933)	APOB (ENSSHBG00005009898) #15	LDAH (ENSSHBG00005009862) #16	ENSSHBG00005009844	GDF7 (ENSSHBG00005009832) #17	HS1BP3 (ENSSHBG00005009814) #18	RHOB (ENSSHBG00005009806) #19	ENSSHBG00005009714 ##20	PUM2 (ENSSHBG00005009670) #21	SDC1 (ENSSHBG00005009652) #22	ENSSHBG00005009640	LAPTM4A (ENSSHBG00005009614) #23	WDR35 (ENSSHBG00005009592) #25	TTC32 (ENSSHBG00005009581) #26	OSR1 (ENSSHBG00005009574) #27	NT5C1B (ENSSHBG00005009567) #28	RDH14 (ENSSHBG00005009558) #29	KCNS3 (ENSSHBG00005009545) #30	MSGN1 (ENSSHBG00005009540) #31	ENSSHBG00005009523 #32	SMC6 (ENSSHBG00005009502) #33	VSNL1 (ENSSHBG00005009485) #34	CYRIA (ENSSHBG00005009457) #36	MYCN (ENSSHBG00005009434) #37	DDX1 (ENSSHBG00005009418)
African ostrich	MODERN SPECIES	205												RHOB (ENSSCUG00000002415) #19	ENSSCUG00000002417	ENSSCUG00000002420 ##20	PUM2 (ENSSCUG00000002422) #21	ENSSCUG00000002428 #22	ENSSCUG00000002430	LAPTM4A (ENSSCUG00000002434) #23	MATN3 (ENSSCUG00000002436) #24	WDR35 (ENSSCUG00000002445) #25	ENSSCUG00000002461	OSR1 (ENSSCUG00000002467) #27
Australian saltwater crocodile	MODERN SPECIES	38	ENSCPRG00005004596 #10	WDCP (ENSCPRG00005004611) #10	ENSCPRG00005004618 ##11	UBXN2A (ENSCPRG00005004621) #12	ATAD2B (ENSCPRG00005004626) #13	KLHL29 (ENSCPRG00005004677) #14	ENSCPRG00005004697	TDRD15 (ENSCPRG00005004718)	APOB (ENSCPRG00005004760) #15	LDAH (ENSCPRG00005004941) #16	HS1BP3 (ENSCPRG00005004967) #18	RHOB (ENSCPRG00005004980) #19	ENSCPRG00005004985	ENSCPRG00005004993 ##20	PUM2 (ENSCPRG00005005047) #21	SDC1 (ENSCPRG00005005072) #22	LAPTM4A (ENSCPRG00005005092) #23	MATN3 (ENSCPRG00005005148) #24	WDR35 (ENSCPRG00005005160) #25	TTC32 (ENSCPRG00005005187) #26	OSR1 (ENSCPRG00005005214) #27	ENSCPRG00005005234	NT5C1B (ENSCPRG00005005265) #28	RDH14 (ENSCPRG00005005281) #29	KCNS3 (ENSCPRG00005005307) #30	MSGN1 (ENSCPRG00005005322) #31	GEN1 (ENSCPRG00005005337) #32	ENSCPRG00005005424 #33	ENSCPRG00005005504 #33	VSNL1 (ENSCPRG00005005557) #34	ENSCPRG00005005559
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00940000164003	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000162520.d ##20	ENSGT00940000177852	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000177852	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
Emydidae	ANCESTRAL SPECIES	8	ENSGT00390000001660.e #10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b.s #23	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000165918	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00940000163503.B	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36
painted turtle	MODERN SPECIES	2397	WDCP (ENSCPBG00000020036) #10	MFSD2B (ENSCPBG00000020034) #11	UBXN2A (ENSCPBG00000020031) #12	ATAD2B (ENSCPBG00000020023) #13	KLHL29 (ENSCPBG00000020014) #14	TDRD15 (ENSCPBG00000020009)	APOB (ENSCPBG00000019999) #15	LDAH (ENSCPBG00000019987) #16	GDF7 (ENSCPBG00000019983) #17	ENSCPBG00000019982	HS1BP3 (ENSCPBG00000019981) #18	RHOB (ENSCPBG00000019979) #19	ENSCPBG00000019977	ENSCPBG00000019973 ##20	PUM2 (ENSCPBG00000019966) #21	SDC1 (ENSCPBG00000019963) #22	ENSCPBG00000019959 #23	WDR35 (ENSCPBG00000019949) #25	TTC32 (ENSCPBG00000019945) #26	ENSCPBG00000019943	VPS26A (ENSCPBG00000019942)	SRGN (ENSCPBG00000019940)	KIFBP (ENSCPBG00000019939)	ENSCPBG00000019937	ENSCPBG00000019934	STOX1 (ENSCPBG00000019930)	CCAR1 (ENSCPBG00000019635)	TET1 (ENSCPBG00000019599)	SLC25A16 (ENSCPBG00000019596)	DNA2 (ENSCPBG00000019591)	RUFY2 (ENSCPBG00000019578)
Three-toed box turtle	MODERN SPECIES	15	WDCP (ENSTMTG00000006464) #10	MFSD2B (ENSTMTG00000006392) #11	UBXN2A (ENSTMTG00000006362) #12	ATAD2B (ENSTMTG00000006299) #13	KLHL29 (ENSTMTG00000006263) #14	TDRD15 (ENSTMTG00000006240)	APOB (ENSTMTG00000006158) #15	LDAH (ENSTMTG00000006126) #16	ENSTMTG00000006106	GDF7 (ENSTMTG00000006100) #17	HS1BP3 (ENSTMTG00000006074) #18	RHOB (ENSTMTG00000006061) #19	ENSTMTG00000006051	ENSTMTG00000005951 ##20	PUM2 (ENSTMTG00000005851) #21	SDC1 (ENSTMTG00000005833) #22	ENSTMTG00000005813 #23	WDR35 (ENSTMTG00000005747) #25	TTC32 (ENSTMTG00000005737) #26	ENSTMTG00000005663	OSR1 (ENSTMTG00000005645) #27	ENSTMTG00000005639	NT5C1B (ENSTMTG00000004549) #28	RDH14 (ENSTMTG00000004538) #29	KCNS3 (ENSTMTG00000004528) #30	MSGN1 (ENSTMTG00000004516) #31	GEN1 (ENSTMTG00000004477) #32	SMC6 (ENSTMTG00000003697) #33	VSNL1 (ENSTMTG00000003601) #34	RAD51AP2 (ENSTMTG00000003579)	CYRIA (ENSTMTG00000003533) #36
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00390000005318.b.b.a #11	ENSGT00520000055567.a.b #12	ENSGT00550000074694.b #13	ENSGT00940000158824 #14	ENSGT00940000162581	ENSGT00590000083139 #15	ENSGT00390000009688 #16	ENSGT00940000160140.b #17	ENSGT00950000185286	ENSGT00390000013092 #18	ENSGT00950000182945.b.a.a.b.b.b #19	ENSGT00940000164003	ENSGT00940000162520.d ##20	ENSGT00940000177852	ENSGT00940000157575 #21	ENSGT00940000161171 #22	ENSGT00940000153446.b #23	ENSGT00940000155745 #25	ENSGT00390000011905 #26	ENSGT00940000158993 #27	ENSGT00390000017767.b.a #28	ENSGT00940000160181 #29	ENSGT00940000155979 #30	ENSGT00530000063712.a.b #31	ENSGT00940000159266 #32	ENSGT00550000074816.A.a #33	ENSGT00940000156513 #34	ENSGT00470000042500	ENSGT00390000015159.a.b #36	ENSGT00940000158432.jb.a #37	ENSGT00940000155678
Abingdon island giant tortoise	MODERN SPECIES	346												RHOB (ENSCABG00000007182) #19	ENSCABG00000007183 ##20	PUM2 (ENSCABG00000007185) #21	ENSCABG00000007190	SDC1 (ENSCABG00000007194) #22	LAPTM4A (ENSCABG00000007199) #23	WDR35 (ENSCABG00000007203) #25	TTC32 (ENSCABG00000007209) #26
Goode s thornscrub tortoise	MODERN SPECIES	17	WDCP (ENSGEVG00005004579) #10	MFSD2B (ENSGEVG00005004631) #11	UBXN2A (ENSGEVG00005004707) #12	ATAD2B (ENSGEVG00005004743) #13	KLHL29 (ENSGEVG00005004803) #14	TDRD15 (ENSGEVG00005004857)	APOB (ENSGEVG00005004982) #15	LDAH (ENSGEVG00005005455) #16	GDF7 (ENSGEVG00005005483) #17	ENSGEVG00005005503	HS1BP3 (ENSGEVG00005005524) #18	RHOB (ENSGEVG00005005543) #19	ENSGEVG00005005556	ENSGEVG00005005576 ##20	PUM2 (ENSGEVG00005005679) #21	ENSGEVG00005005777 #22	LAPTM4A (ENSGEVG00005005801) #23	WDR35 (ENSGEVG00005005855) #25	TTC32 (ENSGEVG00005005918) #26	OSR1 (ENSGEVG00005005926) #27	NT5C1B (ENSGEVG00005005960) #28	RDH14 (ENSGEVG00005005984) #29	KCNS3 (ENSGEVG00005006009) #30	MSGN1 (ENSGEVG00005006020) #31	GEN1 (ENSGEVG00005006047) #32	SMC6 (ENSGEVG00005006087) #33	VSNL1 (ENSGEVG00005006120) #34	RAD51AP2 (ENSGEVG00005006144)	CYRIA (ENSGEVG00005006179) #36	ENSGEVG00005006200 #37	DDX1 (ENSGEVG00005006272)
Chinese turtle	MODERN SPECIES	2214												RHOB (ENSPSIG00000011554) #19	ENSPSIG00000001835	ENSPSIG00000011571 ##20	PUM2 (ENSPSIG00000011626) #21	SDC1 (ENSPSIG00000011638) #22	LAPTM4A (ENSPSIG00000011641) #23	WDR35 (ENSPSIG00000011703) #25	TTC32 (ENSPSIG00000011713) #26	ENSPSIG00000011721	OSR1 (ENSPSIG00000011751) #27	NT5C1B (ENSPSIG00000011766) #28	RDH14 (ENSPSIG00000001840) #29	KCNS3 (ENSPSIG00000001843) #30	ENSPSIG00000011815	MSGN1 (ENSPSIG00000001846) #31	GEN1 (ENSPSIG00000011938) #32	SMC6 (ENSPSIG00000012096) #33	VSNL1 (ENSPSIG00000012117) #34	ENSPSIG00000001849	ENSPSIG00000012137