Euteleostomi ANCESTRAL SPECIES 717 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 Sarcopterygii ANCESTRAL SPECIES 356 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 Tetrapoda ANCESTRAL SPECIES 127 ENSGT00940000154259 ENSGT00940000156061 ENSGT00940000158226 ENSGT01050000244941.A ENSGT00940000154810 ENSGT00940000163785.a.b ENSGT00390000006684 ENSGT00390000007535 ENSGT00530000064170.e ENSGT00940000153173.a ENSGT00940000157772 ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 Amniota ANCESTRAL SPECIES 4 ENSGT00940000156243 ENSGT00950000185213 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430 ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT00390000007535 Mammalia ANCESTRAL SPECIES 24 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Theria ANCESTRAL SPECIES 30 ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Eutheria ANCESTRAL SPECIES 7 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Primates ANCESTRAL SPECIES 9 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a.j ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00390000009819.a.b.a.a.a.a.a #10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Lemuriformes ANCESTRAL SPECIES 34 ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.a.a.a #10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Mouse lemur MODERN SPECIES 1 HAUS6 (ENSMICG00000033370) #7 PLIN2 (ENSMICG00000005214) #8 DENND4C (ENSMICG00000007242) #9 ENSMICG00000007262 #10 ACER2 (ENSMICG00000035197) #11 SLC24A2 (ENSMICG00000034280) #12 ENSMICG00000028503 #13 ENSMICG00000036265 #14 MLLT3 (ENSMICG00000035047) #15 FOCAD (ENSMICG00000009888) #16 ENSMICG00000014403 #17 KLHL9 (ENSMICG00000002688) #18 MTAP (ENSMICG00000015072) #19 CDKN2A (ENSMICG00000005835) #20 CDKN2B (ENSMICG00000031833) #21 DMRTA1 (ENSMICG00000046386) #22 ELAVL2 (ENSMICG00000001558) #23 IZUMO3 (ENSMICG00000011839) #24 ENSMICG00000045076 #25 PCSK5 (ENSMICG00000014046) #26 ENSMICG00000002750 #27 OSTF1 (ENSMICG00000007556) #28 NMRK1 (ENSMICG00000007552) #29 CARNMT1 (ENSMICG00000007542) #30 C9orf40 (ENSMICG00000028036) #31 TRPM6 (ENSMICG00000007514) #32 RORB (ENSMICG00000007512) #33 ANXA1 (ENSMICG00000013045) #34 ENSMICG00000027399 #35 ENSMICG00000045378 #36 ENSMICG00000007394 #37 Lemuriformes_a ANCESTRAL SPECIES 35 ENSGT00950000183031.B.e.b ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Greater bamboo lemur MODERN SPECIES 12 ENSPSMG00000011554 #19 CDKN2A (ENSPSMG00000011521) #20 CDKN2B (ENSPSMG00000011508) #21 DMRTA1 (ENSPSMG00000011495) #22 ELAVL2 (ENSPSMG00000011481) #23 ENSPSMG00000011445 IZUMO3 (ENSPSMG00000011440) #24 TUSC1 (ENSPSMG00000011421) CAAP1 (ENSPSMG00000011411) PLAA (ENSPSMG00000011393) LRRC19 (ENSPSMG00000011368) IFT74 (ENSPSMG00000011354) TEK (ENSPSMG00000011306) EQTN (ENSPSMG00000011157) MOB3B (ENSPSMG00000011151) IFNK (ENSPSMG00000011141) C9orf72 (ENSPSMG00000011129) LINGO2 (ENSPSMG00000011106) ACO1 (ENSPSMG00000011080) Coquerels sifaka MODERN SPECIES 1031 SAXO1 (ENSPCOG00000021103) RRAGA (ENSPCOG00000013740) HAUS6 (ENSPCOG00000026237) #7 PLIN2 (ENSPCOG00000027217) #8 DENND4C (ENSPCOG00000000944) #9 ENSPCOG00000019415 ##10 ACER2 (ENSPCOG00000019863) #11 SLC24A2 (ENSPCOG00000011721) #12 MLLT3 (ENSPCOG00000013614) #15 FOCAD (ENSPCOG00000017012) #16 HACD4 (ENSPCOG00000028043) #17 IFNE (ENSPCOG00000015118) MTAP (ENSPCOG00000017099) #19 CDKN2A (ENSPCOG00000025494) #20 CDKN2B (ENSPCOG00000027261) #21 DMRTA1 (ENSPCOG00000021875) #22 Bushbaby MODERN SPECIES 121 FOCAD (ENSOGAG00000007818) #16 HACD4 (ENSOGAG00000007825) #17 IFNB1 (ENSOGAG00000007828) ENSOGAG00000025328 KLHL9 (ENSOGAG00000025932) #18 ENSOGAG00000027157 ENSOGAG00000033309 ENSOGAG00000028717 ENSOGAG00000030880 ENSOGAG00000027191 IFNE (ENSOGAG00000013610) MTAP (ENSOGAG00000007889) #19 CDKN2A (ENSOGAG00000007892) #20 CDKN2B (ENSOGAG00000011002) #21 ENSOGAG00000033113 DMRTA1 (ENSOGAG00000012178) #22 ELAVL2 (ENSOGAG00000016228) #23 TUSC1 (ENSOGAG00000031514) CAAP1 (ENSOGAG00000005033) PLAA (ENSOGAG00000006317) LRRC19 (ENSOGAG00000006322) IFT74 (ENSOGAG00000006320) TEK (ENSOGAG00000016749) ENSOGAG00000032707 EQTN (ENSOGAG00000016757) MOB3B (ENSOGAG00000029287) IFNK (ENSOGAG00000002205) C9orf72 (ENSOGAG00000002207) LINGO2 (ENSOGAG00000033126) Haplorrhini ANCESTRAL SPECIES 9 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a.j ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Simiiformes ANCESTRAL SPECIES 11 ENSGT00910000146874 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Catarrhini ANCESTRAL SPECIES 13 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Hominoidea ANCESTRAL SPECIES 23 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Hominidae ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Homo/Pan group ANCESTRAL SPECIES 27 ENSGT01000000214430.a.a.a.a.a.b.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Pan ANCESTRAL SPECIES 26 ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Chimpanzee MODERN SPECIES 22 IFNA21 (ENSPTRG00000048249) IFNA17 (ENSPTRG00000045595) IFNA14 (ENSPTRG00000044822) IFNA5 (ENSPTRG00000048038) KLHL9 (ENSPTRG00000022846) #18 IFNA6 (ENSPTRG00000041238) ENSPTRG00000050673 IFNA2 (ENSPTRG00000020820) IFNA8 (ENSPTRG00000045477) ENSPTRG00000043432 IFNE (ENSPTRG00000020823) MTAP (ENSPTRG00000020825) #19 CDKN2A (ENSPTRG00000020827) CDKN2B (ENSPTRG00000049465) #21 ENSPTRG00000043190 DMRTA1 (ENSPTRG00000050201) #22 MTRNR2L14 (ENSPTRG00000042327) ENSPTRG00000051343 ENSPTRG00000047423 ELAVL2 (ENSPTRG00000020830) #23 IZUMO3 (ENSPTRG00000029308) #24 TUSC1 (ENSPTRG00000029307) CAAP1 (ENSPTRG00000020831) PLAA (ENSPTRG00000020832) IFT74 (ENSPTRG00000020833) LRRC19 (ENSPTRG00000020834) TEK (ENSPTRG00000020835) EQTN (ENSPTRG00000020836) MOB3B (ENSPTRG00000020837) IFNK (ENSPTRG00000020838) C9orf72 (ENSPTRG00000020839) Bonobo MODERN SPECIES 22 IFNA10 (ENSPPAG00000009659) IFNA7 (ENSPPAG00000033124) IFNA17 (ENSPPAG00000005706) IFNA14 (ENSPPAG00000006950) IFNA5 (ENSPPAG00000009372) KLHL9 (ENSPPAG00000039116) #18 IFNA6 (ENSPPAG00000008243) ENSPPAG00000008684 IFNA2 (ENSPPAG00000021138) IFNA8 (ENSPPAG00000011307) ENSPPAG00000031511 IFNE (ENSPPAG00000011111) MTAP (ENSPPAG00000038109) #19 ENSPPAG00000038507 CDKN2B (ENSPPAG00000037066) #21 DMRTA1 (ENSPPAG00000031441) #22 ELAVL2 (ENSPPAG00000041539) #23 IZUMO3 (ENSPPAG00000043400) #24 ENSPPAG00000035721 CAAP1 (ENSPPAG00000037255) PLAA (ENSPPAG00000040082) IFT74 (ENSPPAG00000000306) LRRC19 (ENSPPAG00000012895) TEK (ENSPPAG00000034261) EQTN (ENSPPAG00000042132) MOB3B (ENSPPAG00000042835) C9orf72 (ENSPPAG00000028395) ENSPPAG00000000049 LINGO2 (ENSPPAG00000033214) ENSPPAG00000031228 ACO1 (ENSPPAG00000033498) Human MODERN SPECIES 21 IFNA10 (ENSG00000186803) IFNA16 (ENSG00000147885) IFNA17 (ENSG00000234829) IFNA14 (ENSG00000228083) IFNA5 (ENSG00000147873) KLHL9 (ENSG00000198642) #18 IFNA6 (ENSG00000120235) IFNA13 (ENSG00000233816) IFNA2 (ENSG00000188379) IFNA8 (ENSG00000120242) IFNA1 (ENSG00000197919) IFNE (ENSG00000184995) MTAP (ENSG00000099810) #19 CDKN2A (ENSG00000147889) #20 CDKN2B (ENSG00000147883) #21 DMRTA1 (ENSG00000176399) #22 ELAVL2 (ENSG00000107105) #23 IZUMO3 (ENSG00000205442) #24 TUSC1 (ENSG00000198680) CAAP1 (ENSG00000120159) PLAA (ENSG00000137055) IFT74 (ENSG00000096872) LRRC19 (ENSG00000184434) TEK (ENSG00000120156) EQTN (ENSG00000120160) MOB3B (ENSG00000120162) IFNK (ENSG00000147896) C9orf72 (ENSG00000147894) LINGO2 (ENSG00000174482) ACO1 (ENSG00000122729) RIGI (ENSG00000107201) Gorilla MODERN SPECIES 22 ENSGGOG00000040005 SLC24A2 (ENSGGOG00000016544) #12 MLLT3 (ENSGGOG00000004505) #15 FOCAD (ENSGGOG00000008191) #16 HACD4 (ENSGGOG00000016141) #17 IFNB1 (ENSGGOG00000025576) IFNW1 (ENSGGOG00000012076) KLHL9 (ENSGGOG00000023406) #18 IFNA1 (ENSGGOG00000038600) IFNA2 (ENSGGOG00000026395) IFNA13 (ENSGGOG00000036801) IFNE (ENSGGOG00000015760) MTAP (ENSGGOG00000012929) #19 CDKN2A (ENSGGOG00000024454) #20 CDKN2B (ENSGGOG00000042843) #21 DMRTA1 (ENSGGOG00000009094) #22 ELAVL2 (ENSGGOG00000003678) #23 IZUMO3 (ENSGGOG00000011508) #24 TUSC1 (ENSGGOG00000004137) CAAP1 (ENSGGOG00000015329) ENSGGOG00000016635 LRRC19 (ENSGGOG00000036824) IFT74 (ENSGGOG00000007259) TEK (ENSGGOG00000015924) EQTN (ENSGGOG00000013734) MOB3B (ENSGGOG00000004602) IFNK (ENSGGOG00000027413) C9orf72 (ENSGGOG00000006338) ENSGGOG00000036154 LINGO2 (ENSGGOG00000013148) ENSGGOG00000006944 Orangutan MODERN SPECIES 22 IFNA16 (ENSPPYG00000031165) ENSPPYG00000035433 ENSPPYG00000040684 ENSPPYG00000030191 IFNA14 (ENSPPYG00000032470) IFNA5 (ENSPPYG00000032823) IFNA6 (ENSPPYG00000033933) ENSPPYG00000035412 IFNA8 (ENSPPYG00000033446) ENSPPYG00000035735 ENSPPYG00000035351 MTAP (ENSPPYG00000019171) #19 ENSPPYG00000030927 CDKN2A (ENSPPYG00000019169) #20 CDKN2B (ENSPPYG00000019168) #21 DMRTA1 (ENSPPYG00000019167) #22 ELAVL2 (ENSPPYG00000019166) #23 IZUMO3 (ENSPPYG00000038165) #24 TUSC1 (ENSPPYG00000019164) CAAP1 (ENSPPYG00000025841) PLAA (ENSPPYG00000019161) LRRC19 (ENSPPYG00000019160) IFT74 (ENSPPYG00000019159) TEK (ENSPPYG00000019158) EQTN (ENSPPYG00000019157) IFNK (ENSPPYG00000019155) MOB3B (ENSPPYG00000019156) C9orf72 (ENSPPYG00000019154) LINGO2 (ENSPPYG00000019153) ACO1 (ENSPPYG00000019150) RIGI (ENSPPYG00000019149) Gibbon MODERN SPECIES 23 CDC26 (ENSNLEG00000016645) ENSNLEG00000033789 FKBP15 (ENSNLEG00000016599) SLC31A2 (ENSNLEG00000027922) ZFP37 (ENSNLEG00000016581) ZNF883 (ENSNLEG00000018988) SLC46A2 (ENSNLEG00000016574) SNX30 (ENSNLEG00000028611) INIP (ENSNLEG00000016554) ENSNLEG00000016552 ENSNLEG00000031382 PTBP3 (ENSNLEG00000029589) SUSD1 (ENSNLEG00000016452) UGCG (ENSNLEG00000016446) SHOC1 (ENSNLEG00000016401) DMRTA1 (ENSNLEG00000035351) #22 ELAVL2 (ENSNLEG00000016382) #23 IZUMO3 (ENSNLEG00000016378) #24 CAAP1 (ENSNLEG00000016367) PLAA (ENSNLEG00000016346) ENSNLEG00000016344 ENSNLEG00000016321 TEK (ENSNLEG00000016282) FAM205A (ENSNLEG00000016276) TOPORS (ENSNLEG00000005371) ENSNLEG00000030141 NDUFB6 (ENSNLEG00000005361) TAF1L (ENSNLEG00000005354) TMEM215 (ENSNLEG00000031457) APTX (ENSNLEG00000032184) ENSNLEG00000005268 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 ENSGT00940000157772 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00910000147619 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000164672.b ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00910000147619 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000164672.b ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Olive baboon MODERN SPECIES 4 HACD4 (ENSPANG00000025246) #17 IFNB1 (ENSPANG00000000084) IFNW1 (ENSPANG00000046967) ENSPANG00000032030 IFNA14 (ENSPANG00000041833) KLHL9 (ENSPANG00000025244) #18 ENSPANG00000045049 IFNA6 (ENSPANG00000048129) IFNA8 (ENSPANG00000042591) ENSPANG00000050899 ENSPANG00000045683 MTAP (ENSPANG00000025242) #19 ENSPANG00000030138 ENSPANG00000048816 ENSPANG00000045037 DMRTA1 (ENSPANG00000029682) #22 ELAVL2 (ENSPANG00000025263) #23 ENSPANG00000050863 ENSPANG00000039181 ENSPANG00000045330 IZUMO3 (ENSPANG00000025266) #24 TUSC1 (ENSPANG00000049859) ENSPANG00000039634 ENSPANG00000041329 CAAP1 (ENSPANG00000025265) PLAA (ENSPANG00000025264) ENSPANG00000044640 IFT74 (ENSPANG00000025276) ENSPANG00000049233 LRRC19 (ENSPANG00000036052) TEK (ENSPANG00000025275) Cercopithecinae_d ANCESTRAL SPECIES 172 ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00910000147619 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Sooty mangabey MODERN SPECIES 170 KLHL9 (ENSCATG00000015406) #18 IFNA6 (ENSCATG00000022888) IFNE (ENSCATG00000042094) MTAP (ENSCATG00000041286) #19 CDKN2A (ENSCATG00000009720) #20 CDKN2B (ENSCATG00000036130) #21 ENSCATG00000044350 DMRTA1 (ENSCATG00000034725) #22 ENSCATG00000039863 ELAVL2 (ENSCATG00000012522) #23 IZUMO3 (ENSCATG00000042543) #24 CAAP1 (ENSCATG00000045198) PLAA (ENSCATG00000019480) ENSCATG00000040114 LRRC19 (ENSCATG00000034126) IFT74 (ENSCATG00000033075) TEK (ENSCATG00000033710) EQTN (ENSCATG00000010354) MOB3B (ENSCATG00000039675) C9orf72 (ENSCATG00000021978) ENSCATG00000036469 LINGO2 (ENSCATG00000021429) ENSCATG00000042284 Drill MODERN SPECIES 1731 DMRTA1 (ENSMLEG00000027732) #22 ENSMLEG00000027781 #23 Macaca ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 ENSGT00910000147619 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000183134.c.b.p ENSGT00390000009366.c.a.b Pig-tailed macaque MODERN SPECIES 265 ENSMNEG00000043566 IFNA14 (ENSMNEG00000041515) KLHL9 (ENSMNEG00000031087) #18 IFNA6 (ENSMNEG00000004784) ENSMNEG00000035314 ENSMNEG00000038078 IFNE (ENSMNEG00000038701) MTAP (ENSMNEG00000043027) #19 CDKN2A (ENSMNEG00000044907) #20 CDKN2B (ENSMNEG00000041291) #21 ENSMNEG00000028735 DMRTA1 (ENSMNEG00000029016) #22 ENSMNEG00000028981 ELAVL2 (ENSMNEG00000032526) #23 IZUMO3 (ENSMNEG00000037442) #24 Macaca_a ANCESTRAL SPECIES 10 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT00940000156051.mc.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00910000147619 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.a.b.b.a ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00390000009366.c.a.b Rhesus MODERN SPECIES 6 IFNB1 (ENSMMUG00000019067) IFNW1 (ENSMMUG00000058193) ENSMMUG00000058435 IFNA10 (ENSMMUG00000058565) ENSMMUG00000052729 IFNA14 (ENSMMUG00000058900) KLHL9 (ENSMMUG00000010959) #18 IFNA6 (ENSMMUG00000054514) ENSMMUG00000055493 IFNA8 (ENSMMUG00000063809) IFNA13 (ENSMMUG00000051298) ENSMMUG00000063104 MTAP (ENSMMUG00000001137) #19 CDKN2B (ENSMMUG00000001134) #21 ENSMMUG00000065070 DMRTA1 (ENSMMUG00000054138) #22 ENSMMUG00000053595 ELAVL2 (ENSMMUG00000010038) #23 IZUMO3 (ENSMMUG00000059096) #24 TUSC1 (ENSMMUG00000059471) ENSMMUG00000059255 CAAP1 (ENSMMUG00000006073) PLAA (ENSMMUG00000064752) LRRC19 (ENSMMUG00000006079) IFT74 (ENSMMUG00000006076) TEK (ENSMMUG00000006080) ENSMMUG00000053713 EQTN (ENSMMUG00000061449) IFNK (ENSMMUG00000064869) MOB3B (ENSMMUG00000062843) C9orf72 (ENSMMUG00000016508) Vervet Monkey MODERN SPECIES 3 IFNB1 (ENSCSAG00000000432) IFNW1 (ENSCSAG00000000433) ENSCSAG00000000434 ENSCSAG00000000435 ENSCSAG00000000436 IFNA14 (ENSCSAG00000000437) IFNA6 (ENSCSAG00000000438) ENSCSAG00000000439 IFNA2 (ENSCSAG00000009666) IFNA8 (ENSCSAG00000009673) ENSCSAG00000000440 IFNE (ENSCSAG00000009680) MTAP (ENSCSAG00000009686) #19 ENSCSAG00000009696 CDKN2B (ENSCSAG00000009704) #21 DMRTA1 (ENSCSAG00000009709) #22 ELAVL2 (ENSCSAG00000009718) #23 IZUMO3 (ENSCSAG00000009727) #24 TUSC1 (ENSCSAG00000000441) CAAP1 (ENSCSAG00000009734) PLAA (ENSCSAG00000009742) LRRC19 (ENSCSAG00000009756) IFT74 (ENSCSAG00000009766) TEK (ENSCSAG00000009773) ENSCSAG00000000442 EQTN (ENSCSAG00000009785) IFNK (ENSCSAG00000000443) MOB3B (ENSCSAG00000009793) C9orf72 (ENSCSAG00000009804) ACTB (ENSCSAG00000000444) LINGO2 (ENSCSAG00000000445) Rhinopithecus ANCESTRAL SPECIES 582 ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000153593.c.b.d.a ENSGT00940000160640 #22 Black snub-nosed monkey MODERN SPECIES 94 KLHL9 (ENSRBIG00000028501) #18 IFNA8 (ENSRBIG00000029844) IFNE (ENSRBIG00000042935) MTAP (ENSRBIG00000039442) #19 ENSRBIG00000033170 ENSRBIG00000030222 DMRTA1 (ENSRBIG00000034841) #22 Golden snub-nosed monkey MODERN SPECIES 2851 MTAP (ENSRROG00000004628) #19 CDKN2A (ENSRROG00000037214) #20 CDKN2B (ENSRROG00000037735) #21 ENSRROG00000042295 DMRTA1 (ENSRROG00000034145) #22 Platyrrhini ANCESTRAL SPECIES 8 ENSGT00390000009819.a.b.a.a.b.a.j ##10 ENSGT00730000110920.b.a.b #11 ENSGT00910000146874 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Cebidae ANCESTRAL SPECIES 7 ENSGT00950000182920.b.a.b.a.b.i.a #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a.j ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Marmoset MODERN SPECIES MLLT3 (ENSCJAG00000008994) #15 FOCAD (ENSCJAG00000008887) #16 HACD4 (ENSCJAG00000008870) #17 IFNW1 (ENSCJAG00000044329) ENSCJAG00000082610 ENSCJAG00000073103 ENSCJAG00000073023 ENSCJAG00000083249 KLHL9 (ENSCJAG00000022401) #18 ENSCJAG00000060785 ENSCJAG00000008021 #19 ENSCJAG00000051705 CDKN2B (ENSCJAG00000008048) #21 ENSCJAG00000058382 ENSCJAG00000022751 DMRTA1 (ENSCJAG00000008059) #22 ENSCJAG00000079951 ENSCJAG00000065871 ELAVL2 (ENSCJAG00000008064) #23 ENSCJAG00000060971 IZUMO3 (ENSCJAG00000080921) #24 TUSC1 (ENSCJAG00000043194) ENSCJAG00000085985 ENSCJAG00000056845 ENSCJAG00000059870 CAAP1 (ENSCJAG00000007987) PLAA (ENSCJAG00000007921) ENSCJAG00000053641 ENSCJAG00000085474 IFT74 (ENSCJAG00000018308) LRRC19 (ENSCJAG00000064085) Cebidae_a ANCESTRAL SPECIES 84 ENSGT00950000182920.b.a.b.a.b.i.a #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a.j ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 Capuchin MODERN SPECIES 186 MTAP (ENSCCAG00000019057) #19 CDKN2A (ENSCCAG00000034154) #20 CDKN2B (ENSCCAG00000023972) #21 DMRTA1 (ENSCCAG00000027494) #22 ELAVL2 (ENSCCAG00000024508) #23 IZUMO3 (ENSCCAG00000037648) #24 Bolivian squirrel monkey MODERN SPECIES 69 PLIN2 (ENSSBOG00000030779) #8 DENND4C (ENSSBOG00000033170) #9 ENSSBOG00000018471 #10 ACER2 (ENSSBOG00000032724) #11 SLC24A2 (ENSSBOG00000027426) #12 MLLT3 (ENSSBOG00000029045) #15 FOCAD (ENSSBOG00000024709) #16 HACD4 (ENSSBOG00000004033) #17 ENSSBOG00000012028 IFNA14 (ENSSBOG00000033464) KLHL9 (ENSSBOG00000030862) #18 ENSSBOG00000026349 MTAP (ENSSBOG00000020187) #19 CDKN2A (ENSSBOG00000030194) #20 CDKN2B (ENSSBOG00000028011) #21 DMRTA1 (ENSSBOG00000020210) #22 ELAVL2 (ENSSBOG00000028114) #23 IZUMO3 (ENSSBOG00000031342) #24 F5 (ENSSBOG00000020664) SLC19A2 (ENSSBOG00000022009) CCDC181 (ENSSBOG00000036053) BLZF1 (ENSSBOG00000033672) NME7 (ENSSBOG00000034004) ATP1B1 (ENSSBOG00000032878) DPT (ENSSBOG00000024429) ENSSBOG00000035482 TBX19 (ENSSBOG00000029923) SFT2D2 (ENSSBOG00000031966) TIPRL (ENSSBOG00000030225) GPR161 (ENSSBOG00000030060) DCAF6 (ENSSBOG00000034143) Mas night monkey MODERN SPECIES 835 ENSANAG00000031170 DENND4C (ENSANAG00000025263) #9 ACER2 (ENSANAG00000024432) #11 ENSANAG00000025101 SLC24A2 (ENSANAG00000029933) #12 MLLT3 (ENSANAG00000032095) #15 FOCAD (ENSANAG00000029314) #16 HACD4 (ENSANAG00000027847) #17 ENSANAG00000031381 KLHL9 (ENSANAG00000033732) #18 IFNE (ENSANAG00000027745) MTAP (ENSANAG00000029387) #19 ENSANAG00000019784 CDKN2A (ENSANAG00000025540) #20 CDKN2B (ENSANAG00000018770) #21 DMRTA1 (ENSANAG00000021248) #22 ENSANAG00000029023 ELAVL2 (ENSANAG00000032553) #23 IZUMO3 (ENSANAG00000021921) #24 ENSANAG00000022652 ENSANAG00000022457 Tarsier MODERN SPECIES 7025 DMRTA1 (ENSTSYG00000011375) #22 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Glires ANCESTRAL SPECIES 9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Rodentia ANCESTRAL SPECIES 9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Myomorpha ANCESTRAL SPECIES 1 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Muroidea ANCESTRAL SPECIES 1 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.o ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.o ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00900000143271 ENSGT00940000159251 Cricetidae ANCESTRAL SPECIES 2 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00900000143271 ENSGT00940000159251 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00950000183031.B.e.b ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.o ENSGT00940000154359.e #18 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00900000143271 ENSGT00940000159251 ENSGT00940000155417.a.b Northern American deer mouse MODERN SPECIES 11 ENSPEMG00000025225 ENSPEMG00000030502 ENSPEMG00000024802 Klhl9 (ENSPEMG00000013714) #18 ENSPEMG00000030301 ENSPEMG00000027437 ENSPEMG00000027847 ENSPEMG00000024899 ENSPEMG00000026834 Ifne (ENSPEMG00000029831) ENSPEMG00000007998 #19 ENSPEMG00000029915 ENSPEMG00000010842 #20 ENSPEMG00000028835 Cdkn2b (ENSPEMG00000025789) #21 Dmrta1 (ENSPEMG00000008771) #22 Elavl2 (ENSPEMG00000014101) #23 ENSPEMG00000013102 ENSPEMG00000031412 Izumo3 (ENSPEMG00000019058) #24 Caap1 (ENSPEMG00000000545) Plaa (ENSPEMG00000009992) Ift74 (ENSPEMG00000017074) Lrrc19 (ENSPEMG00000017681) Tek (ENSPEMG00000000588) Eqtn (ENSPEMG00000016567) Mysm1 (ENSPEMG00000011781) ENSPEMG00000012194 Jun (ENSPEMG00000014041) Fggy (ENSPEMG00000007085) ENSPEMG00000026283 Prairie vole MODERN SPECIES 1 Focad (ENSMOCG00000016725) #16 Hacd4 (ENSMOCG00000009794) #17 ENSMOCG00000007135 ENSMOCG00000003596 ENSMOCG00000003333 ENSMOCG00000002912 ENSMOCG00000022936 Klhl9 (ENSMOCG00000003966) #18 ENSMOCG00000004176 ENSMOCG00000003427 ENSMOCG00000004406 ENSMOCG00000003644 Mtap (ENSMOCG00000012400) #19 ENSMOCG00000013892 #20 Cdkn2b (ENSMOCG00000015669) #21 Dmrta1 (ENSMOCG00000002337) #22 ENSMOCG00000004079 Elavl2 (ENSMOCG00000016960) #23 ENSMOCG00000018411 Izumo3 (ENSMOCG00000019669) #24 Tusc1 (ENSMOCG00000019464) ENSMOCG00000003689 Caap1 (ENSMOCG00000012535) Plaa (ENSMOCG00000017762) Ift74 (ENSMOCG00000002321) Lrrc19 (ENSMOCG00000008422) Tek (ENSMOCG00000017310) Eqtn (ENSMOCG00000018858) Mysm1 (ENSMOCG00000001327) Jun (ENSMOCG00000006483) Fggy (ENSMOCG00000017533) Cricetinae ANCESTRAL SPECIES 5 ENSGT01000000214430.a.a.b ENSGT00950000182991.B.fb #19 ENSGT00950000182991.B.gb #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00900000143271 ENSGT00940000159251 Chinese hamster chok1gshd MODERN SPECIES 111 ENSCGRG00001007554 ENSCGRG00001006905 ENSCGRG00001006765 ENSCGRG00001005704 ENSCGRG00001009627 ENSCGRG00001009477 ENSCGRG00001006253 ENSCGRG00001005821 ENSCGRG00001007528 ENSCGRG00001005639 Ifne (ENSCGRG00001006683) ENSCGRG00001020377 #19 ENSCGRG00001019783 ENSCGRG00001016483 #20 Cdkn2b (ENSCGRG00001014610) #21 Dmrta1 (ENSCGRG00001014289) #22 ENSCGRG00001013517 ENSCGRG00001012785 Elavl2 (ENSCGRG00001024409) #23 Izumo3 (ENSCGRG00001023060) #24 ENSCGRG00001019319 Tusc1 (ENSCGRG00001012163) Caap1 (ENSCGRG00001016530) ENSCGRG00001008077 Plaa (ENSCGRG00001024275) Lrrc19 (ENSCGRG00001023151) Ift74 (ENSCGRG00001020714) Tek (ENSCGRG00001018441) Eqtn (ENSCGRG00001001186) Mysm1 (ENSCGRG00001015762) Jun (ENSCGRG00001011810) Golden Hamster MODERN SPECIES 662 Adamtsl1 (ENSMAUG00000018361) Saxo1 (ENSMAUG00000004358) Rraga (ENSMAUG00000003702) ENSMAUG00000020314 Dennd4c (ENSMAUG00000002052) #9 ENSMAUG00000016545 ##10 Acer2 (ENSMAUG00000020667) #11 Slc24a2 (ENSMAUG00000016398) #12 Mllt3 (ENSMAUG00000021318) #15 Focad (ENSMAUG00000012306) #16 Hacd4 (ENSMAUG00000000488) #17 ENSMAUG00000004733 Mtap (ENSMAUG00000010309) #19 Cdkn2a (ENSMAUG00000003307) #20 Cdkn2b (ENSMAUG00000019635) #21 Dmrta1 (ENSMAUG00000004332) #22 Elavl2 (ENSMAUG00000011955) #23 Izumo3 (ENSMAUG00000014991) #24 Tusc1 (ENSMAUG00000020941) ENSMAUG00000014308 Plaa (ENSMAUG00000013719) Ift74 (ENSMAUG00000001215) ENSMAUG00000006577 Tek (ENSMAUG00000018555) Eqtn (ENSMAUG00000015891) Mysm1 (ENSMAUG00000014841) ENSMAUG00000014400 Jun (ENSMAUG00000007038) Fggy (ENSMAUG00000019211) Hook1 (ENSMAUG00000017707) ENSMAUG00000008711 Murinae ANCESTRAL SPECIES 2 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.p.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00900000143271 ENSGT00940000159251 Mus ANCESTRAL SPECIES 3 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000168083 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00940000159251 ENSGT00940000155417.a.b Mus_A ANCESTRAL SPECIES 3 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a ENSGT00860000135766 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000168083 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00940000159251 ENSGT00940000155417.a.b Mus_B ANCESTRAL SPECIES 5 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.b.p.a.b.a ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.b ENSGT00860000135766 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000168083 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000164376.c ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00940000159251 Mus_C ANCESTRAL SPECIES 2 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b.a ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.b ENSGT00860000135766 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000168083 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000164376.c ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000157721 ENSGT00940000162061 ENSGT01000000214434.F ENSGT00940000159251 Steppe mouse MODERN SPECIES 3181 Ifna4 (ENSMSIG00000015985) Ifna5 (ENSMSIG00000015987) Ifne (ENSMSIG00000015993) Mtap (ENSMSIG00000016003) #19 Cdkn2a (ENSMSIG00000016031) ENSMSIG00000016052 #21 Dmrta1 (ENSMSIG00000016072) #22 ENSMSIG00000016078 Zfp352 (ENSMSIG00000016079) Elavl2 (ENSMSIG00000016130) #23 spretus MODERN SPECIES 13 MGP_SPRETEiJ_G0027107 Pramel32 (MGP_SPRETEiJ_G0027108) MGP_SPRETEiJ_G0027109 MGP_SPRETEiJ_G0027110 MGP_SPRETEiJ_G0027111 MGP_SPRETEiJ_G0027112 Klhl9 (MGP_SPRETEiJ_G0027113) #18 MGP_SPRETEiJ_G0027114 MGP_SPRETEiJ_G0027115 MGP_SPRETEiJ_G0027116 MGP_SPRETEiJ_G0027117 Ifne (MGP_SPRETEiJ_G0027118) Mtap (MGP_SPRETEiJ_G0027119) #19 Cdkn2a (MGP_SPRETEiJ_G0027120) Cdkn2b (MGP_SPRETEiJ_G0027121) #21 Dmrta1 (MGP_SPRETEiJ_G0027122) #22 Zfp352 (MGP_SPRETEiJ_G0027123) Elavl2 (MGP_SPRETEiJ_G0027124) #23 Izumo3 (MGP_SPRETEiJ_G0027125) #24 Tusc1 (MGP_SPRETEiJ_G0027126) Caap1 (MGP_SPRETEiJ_G0027127) MGP_SPRETEiJ_G0027128 Plaa (MGP_SPRETEiJ_G0027129) Ift74 (MGP_SPRETEiJ_G0027130) Lrrc19 (MGP_SPRETEiJ_G0027131) MGP_SPRETEiJ_G0027132 Tek (MGP_SPRETEiJ_G0027133) Eqtn (MGP_SPRETEiJ_G0027134) Mysm1 (MGP_SPRETEiJ_G0027135) Jun (MGP_SPRETEiJ_G0027136) Fggy (MGP_SPRETEiJ_G0027137) Mouse MODERN SPECIES 13 Gm13275 (ENSMUSG00000099518) Gm13279 (ENSMUSG00000099420) Gm13285 (ENSMUSG00000095101) Gm13287 (ENSMUSG00000094648) Gm13288 (ENSMUSG00000070908) Ifna7 (ENSMUSG00000100713) Ifna11 (ENSMUSG00000100549) Ifna6 (ENSMUSG00000101252) Ifna5 (ENSMUSG00000096682) Ifna4 (ENSMUSG00000070904) Ifna1 (ENSMUSG00000095498) Ifne (ENSMUSG00000045364) Mtap (ENSMUSG00000062937) #19 Cdkn2a (ENSMUSG00000044303) Cdkn2b (ENSMUSG00000073802) #21 Dmrta1 (ENSMUSG00000043753) #22 Zfp352 (ENSMUSG00000070902) Elavl2 (ENSMUSG00000008489) #23 Izumo3 (ENSMUSG00000028533) #24 Gm12666 (ENSMUSG00000066107) Tusc1 (ENSMUSG00000054000) Caap1 (ENSMUSG00000028578) Plaa (ENSMUSG00000028577) Ift74 (ENSMUSG00000028576) Lrrc19 (ENSMUSG00000049799) Tek (ENSMUSG00000006386) Eqtn (ENSMUSG00000028575) Mysm1 (ENSMUSG00000062627) Jun (ENSMUSG00000052684) Fggy (ENSMUSG00000028573) Hook1 (ENSMUSG00000028572) Ryukyu mouse MODERN SPECIES 13 MGP_CAROLIEiJ_G0026143 MGP_CAROLIEiJ_G0026144 Pramel32 (MGP_CAROLIEiJ_G0026145) MGP_CAROLIEiJ_G0026146 MGP_CAROLIEiJ_G0026147 MGP_CAROLIEiJ_G0026148 MGP_CAROLIEiJ_G0026149 Klhl9 (MGP_CAROLIEiJ_G0026150) #18 MGP_CAROLIEiJ_G0026151 MGP_CAROLIEiJ_G0026152 MGP_CAROLIEiJ_G0026153 Ifne (MGP_CAROLIEiJ_G0026154) Mtap (MGP_CAROLIEiJ_G0026155) #19 Cdkn2a (MGP_CAROLIEiJ_G0026156) Cdkn2b (MGP_CAROLIEiJ_G0026157) #21 Dmrta1 (MGP_CAROLIEiJ_G0026158) #22 Elavl2 (MGP_CAROLIEiJ_G0026159) #23 Izumo3 (MGP_CAROLIEiJ_G0026160) #24 Tusc1 (MGP_CAROLIEiJ_G0026161) Caap1 (MGP_CAROLIEiJ_G0026162) MGP_CAROLIEiJ_G0026163 Plaa (MGP_CAROLIEiJ_G0026164) MGP_CAROLIEiJ_G0026165 Lrrc19 (MGP_CAROLIEiJ_G0026166) Tek (MGP_CAROLIEiJ_G0026167) Eqtn (MGP_CAROLIEiJ_G0026168) Mysm1 (MGP_CAROLIEiJ_G0026169) Jun (MGP_CAROLIEiJ_G0026170) Fggy (MGP_CAROLIEiJ_G0026171) Hook1 (MGP_CAROLIEiJ_G0026172) Cyp2j13 (MGP_CAROLIEiJ_G0026173) Shrew mouse MODERN SPECIES 19 MGP_PahariEiJ_G0028480 MGP_PahariEiJ_G0028481 MGP_PahariEiJ_G0028482 MGP_PahariEiJ_G0028484 MGP_PahariEiJ_G0028483 Klhl9 (MGP_PahariEiJ_G0028485) #18 MGP_PahariEiJ_G0028486 MGP_PahariEiJ_G0028487 MGP_PahariEiJ_G0028489 MGP_PahariEiJ_G0028488 MGP_PahariEiJ_G0028490 Ifne (MGP_PahariEiJ_G0028491) Mtap (MGP_PahariEiJ_G0028492) #19 Cdkn2a (MGP_PahariEiJ_G0028493) Cdkn2b (MGP_PahariEiJ_G0028494) #21 Dmrta1 (MGP_PahariEiJ_G0028495) #22 Elavl2 (MGP_PahariEiJ_G0028496) #23 Izumo3 (MGP_PahariEiJ_G0028497) #24 Tusc1 (MGP_PahariEiJ_G0028498) Caap1 (MGP_PahariEiJ_G0028499) MGP_PahariEiJ_G0028500 Plaa (MGP_PahariEiJ_G0028501) Ift74 (MGP_PahariEiJ_G0028502) Lrrc19 (MGP_PahariEiJ_G0028503) Tek (MGP_PahariEiJ_G0028504) MGP_PahariEiJ_G0028505 Mysm1 (MGP_PahariEiJ_G0028506) Jun (MGP_PahariEiJ_G0028507) Fggy (MGP_PahariEiJ_G0028508) Hook1 (MGP_PahariEiJ_G0028509) Cyp2j13 (MGP_PahariEiJ_G0028510) Rat MODERN SPECIES 15 LOC120103158 (ENSRNOG00000064351) LOC120103159 (ENSRNOG00000069770) LOC120103160 (ENSRNOG00000063583) LOC120103161 (ENSRNOG00000063625) LOC120103162 (ENSRNOG00000065583) RGD1560539 (ENSRNOG00000066962) LOC120103163 (ENSRNOG00000066857) LOC120103164 (ENSRNOG00000070321) LOC100911527 (ENSRNOG00000065328) Ifne (ENSRNOG00000024204) LOC100362345 (ENSRNOG00000024197) Mtap (ENSRNOG00000006615) #19 ENSRNOG00000070364 Cdkn2a (ENSRNOG00000059837) Cdkn2b (ENSRNOG00000006735) #21 Dmrta1 (ENSRNOG00000024093) #22 Zfp352 (ENSRNOG00000033600) Zfp353 (ENSRNOG00000050804) Elavl2 (ENSRNOG00000006853) #23 Izumo3 (ENSRNOG00000022488) #24 AABR07049223.1 (ENSRNOG00000032516) AABR07049228.1 (ENSRNOG00000056007) Tusc1 (ENSRNOG00000066328) Caap1 (ENSRNOG00000007299) Plaa (ENSRNOG00000007753) Ift74 (ENSRNOG00000008075) Lrrc19 (ENSRNOG00000022225) Tek (ENSRNOG00000008587) Eqtn (ENSRNOG00000026323) Mysm1 (ENSRNOG00000026299) Jun (ENSRNOG00000026293) Upper Galilee mountains blind mole rat MODERN SPECIES 628 Klhl9 (ENSNGAG00000012889) #18 ENSNGAG00000015985 #19 ENSNGAG00000022636 #20 Cdkn2b (ENSNGAG00000012585) #21 Dmrta1 (ENSNGAG00000023922) #22 ENSNGAG00000021866 Elavl2 (ENSNGAG00000014535) #23 ENSNGAG00000022004 Izumo3 (ENSNGAG00000013642) #24 Tusc1 (ENSNGAG00000001051) Caap1 (ENSNGAG00000022127) ENSNGAG00000021141 Plaa (ENSNGAG00000022466) Ift74 (ENSNGAG00000005078) Lrrc19 (ENSNGAG00000004826) Tek (ENSNGAG00000019538) Eqtn (ENSNGAG00000023403) Mob3b (ENSNGAG00000023396) C9orf72 (ENSNGAG00000023767) Lesser Egyptian jerboa MODERN SPECIES 66 Dennd4c (ENSJJAG00000022774) #9 ENSJJAG00000011871 #10 Acer2 (ENSJJAG00000020889) #11 Slc24a2 (ENSJJAG00000020852) #12 ENSJJAG00000018542 Mllt3 (ENSJJAG00000012196) #15 Focad (ENSJJAG00000024309) #16 Hacd4 (ENSJJAG00000024303) #17 ENSJJAG00000024178 Klhl9 (ENSJJAG00000007691) #18 ENSJJAG00000010173 #19 ENSJJAG00000017320 #20 Cdkn2b (ENSJJAG00000021247) #21 ENSJJAG00000009128 ENSJJAG00000009725 Dmrta1 (ENSJJAG00000015837) #22 ENSJJAG00000021773 Elavl2 (ENSJJAG00000008247) #23 Izumo3 (ENSJJAG00000017341) #24 ENSJJAG00000011332 ENSJJAG00000019508 Caap1 (ENSJJAG00000012208) Plaa (ENSJJAG00000013453) Lrrc19 (ENSJJAG00000022557) Ift74 (ENSJJAG00000017963) Tek (ENSJJAG00000019197) ENSJJAG00000020051 Mob3b (ENSJJAG00000000886) C9orf72 (ENSJJAG00000008608) Lingo2 (ENSJJAG00000010453) ENSJJAG00000022023 Kangaroo rat MODERN SPECIES 372 Saxo1 (ENSDORG00000026559) Haus6 (ENSDORG00000026577) #7 ENSDORG00000014197 #8 Dennd4c (ENSDORG00000012055) #9 ENSDORG00000012057 #10 Acer2 (ENSDORG00000002403) #11 Slc24a2 (ENSDORG00000015412) #12 ENSDORG00000027266 ENSDORG00000028514 #15 Focad (ENSDORG00000006921) #16 Hacd4 (ENSDORG00000006925) #17 Klhl9 (ENSDORG00000028408) #18 Mtap (ENSDORG00000012074) #19 ENSDORG00000012075 #20 Cdkn2b (ENSDORG00000012076) #21 Dmrta1 (ENSDORG00000015411) #22 Elavl2 (ENSDORG00000010437) #23 Izumo3 (ENSDORG00000027519) #24 ENSDORG00000005292 Tusc1 (ENSDORG00000029686) Caap1 (ENSDORG00000025530) Plaa (ENSDORG00000002789) Ift74 (ENSDORG00000008963) Lrrc19 (ENSDORG00000008965) Tek (ENSDORG00000010652) ENSDORG00000010654 Mob3b (ENSDORG00000010444) C9orf72 (ENSDORG00000006734) Lingo2 (ENSDORG00000029438) Rodentia_A ANCESTRAL SPECIES 11 ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT00940000167452 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Hystricomorpha ANCESTRAL SPECIES 7 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT01100000266946 ENSGT00940000157772 ENSGT00940000153173.a Hystricomorpha_a ANCESTRAL SPECIES 5 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00860000136187 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Hystricomorpha_b ANCESTRAL SPECIES 11 ENSGT01000000214430.a.a.a.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 Long-tailed chinchilla MODERN SPECIES 179 MTAP (ENSCLAG00000001731) #19 CDKN2A (ENSCLAG00000001664) #20 CDKN2B (ENSCLAG00000004253) #21 ENSCLAG00000004081 #22 ELAVL2 (ENSCLAG00000003388) #23 CAAP1 (ENSCLAG00000002895) PLAA (ENSCLAG00000002600) LRRC19 (ENSCLAG00000002476) IFT74 (ENSCLAG00000002217) TEK (ENSCLAG00000002200) ENSCLAG00000001999 ENSCLAG00000001968 MOB3B (ENSCLAG00000001885) C9orf72 (ENSCLAG00000001862) LINGO2 (ENSCLAG00000017459) ENSCLAG00000001658 ENSCLAG00000002806 ACO1 (ENSCLAG00000002487) RIGI (ENSCLAG00000002351) Degu MODERN SPECIES 140 ENSODEG00000004090 ENSODEG00000004039 ENSODEG00000003787 #19 ENSODEG00000003701 CDKN2B (ENSODEG00000003617) #21 ENSODEG00000003574 DMRTA1 (ENSODEG00000003392) #22 ELAVL2 (ENSODEG00000002531) #23 ENSODEG00000002352 ENSODEG00000002277 ENSODEG00000018769 CAAP1 (ENSODEG00000002253) PLAA (ENSODEG00000003249) LRRC19 (ENSODEG00000003217) IFT74 (ENSODEG00000003146) TEK (ENSODEG00000002511) MOB3B (ENSODEG00000002400) C9orf72 (ENSODEG00000002381) LINGO2 (ENSODEG00000018786) ENSODEG00000018803 ENSODEG00000002236 Guinea pig MODERN SPECIES 2 ENSCPOG00000036367 ENSCPOG00000031809 ENSCPOG00000037617 ENSCPOG00000040424 ENSCPOG00000021662 ENSCPOG00000039788 ENSCPOG00000036041 ENSCPOG00000027262 ENSCPOG00000010467 ENSCPOG00000033588 ENSCPOG00000010375 ENSCPOG00000000825 #19 CDKN2A (ENSCPOG00000023988) #20 CDKN2B (ENSCPOG00000001268) #21 DMRTA1 (ENSCPOG00000036480) #22 ELAVL2 (ENSCPOG00000010472) #23 CAAP1 (ENSCPOG00000037143) ENSCPOG00000032640 PLAA (ENSCPOG00000012969) IFT74 (ENSCPOG00000012980) LRRC19 (ENSCPOG00000012981) TEK (ENSCPOG00000009907) MOB3B (ENSCPOG00000009470) ENSCPOG00000000866 C9orf72 (ENSCPOG00000009473) LINGO2 (ENSCPOG00000008899) ENSCPOG00000040788 ENSCPOG00000033096 H2BC18 (ENSCPOG00000030049) ENSCPOG00000037353 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000044890 ENSHGLG00000006210 ENSHGLG00000037708 ENSHGLG00000004959 ENSHGLG00000011793 ENSHGLG00000005602 ##10 ENSHGLG00000000210 ENSHGLG00000035491 ENSHGLG00000041847 ENSHGLG00000006616 #19 ENSHGLG00000020314 ENSHGLG00000008650 ENSHGLG00000034314 #20 CDKN2B (ENSHGLG00000038311) #21 ENSHGLG00000040016 DMRTA1 (ENSHGLG00000051021) #22 ELAVL2 (ENSHGLG00000005423) #23 ENSHGLG00000047261 ENSHGLG00000001616 ENSHGLG00000020416 TUSC1 (ENSHGLG00000039095) ENSHGLG00000036016 ENSHGLG00000034551 PLAA (ENSHGLG00000010977) LRRC19 (ENSHGLG00000040675) ENSHGLG00000032796 IFT74 (ENSHGLG00000007564) ENSHGLG00000037234 TEK (ENSHGLG00000017418) MOB3B (ENSHGLG00000005405) ENSHGLG00000020201 Sciuridae ANCESTRAL SPECIES 6 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078.g #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Marmotini ANCESTRAL SPECIES 1 ENSGT01000000214430.a.b.e ENSGT01000000214430.a.a.a.a.a.b.m.a ENSGT01000000214430.a.b.f.a.b ENSGT01000000214430.a.a.a.a.a.b.n.b.b ENSGT01000000214430.a.a.a.a.a.b.n.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.m.b ENSGT01000000214430.a.a.a.a.a.b.n.b.a.a ENSGT01000000214430.a.b.f.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078.g #20 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00960000189870 ENSGT00940000157772 Marmotini_b ANCESTRAL SPECIES 2 ENSGT01000000214430.a.a.a.a.a.b.n.b.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00960000189870 ENSGT00940000157772 Squirrel MODERN SPECIES 252 ENSSTOG00000024906 #10 ACER2 (ENSSTOG00000022847) #11 SLC24A2 (ENSSTOG00000028358) #12 MLLT3 (ENSSTOG00000027195) #15 FOCAD (ENSSTOG00000015742) #16 HACD4 (ENSSTOG00000015776) #17 ENSSTOG00000021945 ENSSTOG00000033477 ENSSTOG00000027803 ENSSTOG00000033711 ENSSTOG00000021564 ENSSTOG00000019950 IFNE (ENSSTOG00000024739) MTAP (ENSSTOG00000014404) #19 CDKN2B (ENSSTOG00000008721) #21 DMRTA1 (ENSSTOG00000022459) #22 Arctic ground squirrel MODERN SPECIES 198 ENSUPAG00010017776 ENSUPAG00010017790 IFNE (ENSUPAG00010017802) MTAP (ENSUPAG00010017804) #19 ENSUPAG00010017810 CDKN2B (ENSUPAG00010017817) #21 DMRTA1 (ENSUPAG00010017830) #22 ELAVL2 (ENSUPAG00010017838) #23 IZUMO3 (ENSUPAG00010017958) #24 Alpin marmot MODERN SPECIES 30 ENSMMMG00000009657 IFNE (ENSMMMG00000009652) ENSMMMG00000009642 MTAP (ENSMMMG00000009628) #19 ENSMMMG00000009612 #20 ENSMMMG00000009596 #20 DMRTA1 (ENSMMMG00000009543) #22 ENSMMMG00000009529 ELAVL2 (ENSMMMG00000009415) #23 IZUMO3 (ENSMMMG00000009377) #24 ENSMMMG00000009342 CAAP1 (ENSMMMG00000009307) PLAA (ENSMMMG00000009283) LRRC19 (ENSMMMG00000009258) IFT74 (ENSMMMG00000009198) TEK (ENSMMMG00000009044) EQTN (ENSMMMG00000009014) MOB3B (ENSMMMG00000009010) C9orf72 (ENSMMMG00000008985) ENSMMMG00000008980 LINGO2 (ENSMMMG00000008968) ENSMMMG00000008959 Eurasian red squirrel MODERN SPECIES 6 ENSSVLG00005023116 ENSSVLG00005023171 ENSSVLG00005023180 ENSSVLG00005023193 ENSSVLG00005023217 ENSSVLG00005023225 ENSSVLG00005023234 ENSSVLG00005023243 ENSSVLG00005023253 ENSSVLG00005023273 ENSSVLG00005023283 ENSSVLG00005023288 ENSSVLG00005023302 #19 CDKN2A (ENSSVLG00005023359) #20 CDKN2B (ENSSVLG00005023398) #21 DMRTA1 (ENSSVLG00005023462) #22 ELAVL2 (ENSSVLG00005023496) #23 IZUMO3 (ENSSVLG00005023611) #24 TUSC1 (ENSSVLG00005023687) ENSSVLG00005023697 ENSSVLG00005023705 ENSSVLG00005023720 PLAA (ENSSVLG00005023742) IFT74 (ENSSVLG00005023765) LRRC19 (ENSSVLG00005023797) TEK (ENSSVLG00005023870) ENSSVLG00005024155 ENSSVLG00005024176 MOB3B (ENSSVLG00005024202) IFNK (ENSSVLG00005024213) C9orf72 (ENSSVLG00005024231) Lagomorpha ANCESTRAL SPECIES 23 ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Rabbit MODERN SPECIES KLHL9 (ENSOCUG00000008548) #18 ENSOCUG00000027561 ENSOCUG00000021714 ENSOCUG00000028068 ENSOCUG00000036321 ENSOCUG00000015666 ENSOCUG00000021343 IFNE (ENSOCUG00000015672) ENSOCUG00000038006 ENSOCUG00000030275 ENSOCUG00000031845 ENSOCUG00000012289 #19 ENSOCUG00000027972 #20 CDKN2B (ENSOCUG00000012306) #21 ENSOCUG00000021134 DMRTA1 (ENSOCUG00000006069) #22 ELAVL2 (ENSOCUG00000005891) #23 ENSOCUG00000030421 IZUMO3 (ENSOCUG00000022724) #24 TUSC1 (ENSOCUG00000017580) ENSOCUG00000015387 ENSOCUG00000027058 ENSOCUG00000033820 ENSOCUG00000003706 ENSOCUG00000023508 CAAP1 (ENSOCUG00000015461) PLAA (ENSOCUG00000015471) LRRC19 (ENSOCUG00000029228) IFT74 (ENSOCUG00000001320) TEK (ENSOCUG00000017666) ENSOCUG00000036968 Pika MODERN SPECIES 9366 DMRTA1 (ENSOPRG00000013060) #22 Tree shrew MODERN SPECIES 7203 DMRTA1 (ENSTBEG00000015360) #22 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000167452 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT01100000266946 ENSGT00940000157772 Suina ANCESTRAL SPECIES 30 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00950000184123 ENSGT00950000183043.a.b.b.a.a.a.a.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT01030000234620.a.b.a Pig MODERN SPECIES IFN-DELTA-6 (ENSSSCG00000060359) IFN-OMEGA-3 (ENSSSCG00000057864) IFN-ALPHA-17 (ENSSSCG00000054285) IFN-OMEGA-7 (ENSSSCG00000056734) ENSSSCG00000043817 IFN-ALPHA-1 (ENSSSCG00000057273) IFN-DELTA-8 (ENSSSCG00000062062) IFN-ALPHA-10 (ENSSSCG00000063314) ENSSSCG00000058490 ENSSSCG00000047263 ENSSSCG00000031529 IFNE (ENSSSCG00000005136) MTAP (ENSSSCG00000005135) #19 CDKN2A (ENSSSCG00000005134) #20 CDKN2B (ENSSSCG00000034120) #21 DMRTA1 (ENSSSCG00000005131) #22 ENSSSCG00000052428 ELAVL2 (ENSSSCG00000005130) #23 IZUMO3 (ENSSSCG00000005129) #24 TUSC1 (ENSSSCG00000005128) CAAP1 (ENSSSCG00000053029) PLAA (ENSSSCG00000005126) ENSSSCG00000045059 LRRC19 (ENSSSCG00000005125) IFT74 (ENSSSCG00000005124) TEK (ENSSSCG00000005122) ENSSSCG00000057365 ENSSSCG00000056640 ENSSSCG00000005121 ENSSSCG00000044869 ENSSSCG00000060741 Chacoan peccary MODERN SPECIES 784 ENSCWAG00000013149 KLHL9 (ENSCWAG00000013179) #18 ENSCWAG00000013195 ENSCWAG00000013210 ENSCWAG00000013224 ENSCWAG00000013290 ENSCWAG00000013303 ENSCWAG00000013324 ENSCWAG00000013350 ENSCWAG00000013402 ENSCWAG00000013446 IFNE (ENSCWAG00000013463) MTAP (ENSCWAG00000013498) #19 CDKN2A (ENSCWAG00000013543) #20 CDKN2B (ENSCWAG00000013670) #21 DMRTA1 (ENSCWAG00000013683) #22 ELAVL2 (ENSCWAG00000013733) #23 ENSCWAG00000013912 IZUMO3 (ENSCWAG00000013956) #24 TUSC1 (ENSCWAG00000014088) CAAP1 (ENSCWAG00000014114) PLAA (ENSCWAG00000014162) IFT74 (ENSCWAG00000014238) LRRC19 (ENSCWAG00000014294) TEK (ENSCWAG00000014388) ENSCWAG00000015034 ENSCWAG00000015083 KCNH5 (ENSCWAG00000015153) RHOJ (ENSCWAG00000015319) GPHB5 (ENSCWAG00000015356) PPP2R5E (ENSCWAG00000015392) Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 ENSGT00940000157772 Cetacea ANCESTRAL SPECIES 9 ENSGT00940000155903 #15 ENSGT01000000221453 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b.n ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.b.z ENSGT01000000214430.a.a.a.a.a.a.b.m ENSGT01000000214430.a.a.b ENSGT00940000163158.b.b.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 ENSGT00940000154788.ib.b.b Odontoceti ANCESTRAL SPECIES 8 ENSGT00940000155903 #15 ENSGT01000000221453 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.z ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.b ENSGT00940000163158.b.b.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 ENSGT00940000154788.ib.b.b.a Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00940000155903 #15 ENSGT01000000221453 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.a.a.a.a.a.b.m.b.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.b ENSGT00940000163158.b.b.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 ENSGT00940000154788.ib.b.b.a Dolphin MODERN SPECIES 3860 DMRTA1 (ENSTTRG00000015206) #22 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT01000000221453 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.a.a.a.a.a.b.m.b.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.b ENSGT00940000163158.b.b.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00390000007370.j ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT00950000184123 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 Monodontidae ANCESTRAL SPECIES 5 ENSGT00940000155903 #15 ENSGT01000000221453 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.a.a.a.b.k.a ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.b ENSGT00940000163158.b.b.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00390000007370.j ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000154788.ib.b.b.a ENSGT00940000157772 Beluga whale MODERN SPECIES 50 FOCAD (ENSDLEG00000020454) #16 HACD4 (ENSDLEG00000020669) #17 IFNB1 (ENSDLEG00000020677) ENSDLEG00000020680 ENSDLEG00000020689 ENSDLEG00000020694 ENSDLEG00000020697 ENSDLEG00000020704 ENSDLEG00000020708 ENSDLEG00000020711 IFNE (ENSDLEG00000020712) ENSDLEG00000020715 MTAP (ENSDLEG00000020720) #19 CDKN2A (ENSDLEG00000020727) #20 ENSDLEG00000020728 DMRTA1 (ENSDLEG00000020730) #22 ENSDLEG00000020732 ELAVL2 (ENSDLEG00000020736) #23 IZUMO3 (ENSDLEG00000020742) #24 ENSDLEG00000020744 TUSC1 (ENSDLEG00000020748) ENSDLEG00000020753 CAAP1 (ENSDLEG00000020758) PLAA (ENSDLEG00000020764) IFT74 (ENSDLEG00000020767) LRRC19 (ENSDLEG00000020775) TEK (ENSDLEG00000020783) MOB3B (ENSDLEG00000020809) IFNK (ENSDLEG00000020813) CUNH9orf72 (ENSDLEG00000020817) LINGO2 (ENSDLEG00000020824) Narwhal MODERN SPECIES 312 IFNB1 (ENSMMNG00015016208) ENSMMNG00015016113 ENSMMNG00015016081 ENSMMNG00015016051 ENSMMNG00015016023 ENSMMNG00015015997 ENSMMNG00015015976 ENSMMNG00015015959 ENSMMNG00015015943 IFNE (ENSMMNG00015015924) ENSMMNG00015015900 MTAP (ENSMMNG00015015858) #19 CDKN2A (ENSMMNG00015015826) #20 CDKN2B (ENSMMNG00015015802) #21 ENSMMNG00015015785 DMRTA1 (ENSMMNG00015015759) #22 ENSMMNG00015020828 ELAVL2 (ENSMMNG00015020789) #23 IZUMO3 (ENSMMNG00015020736) #24 ENSMMNG00015020712 TUSC1 (ENSMMNG00015020705) CAAP1 (ENSMMNG00015020689) PLAA (ENSMMNG00015020666) LRRC19 (ENSMMNG00015020655) IFT74 (ENSMMNG00015020629) TEK (ENSMMNG00015020478) EQTN (ENSMMNG00015020384) IFNK (ENSMMNG00015020369) MOB3B (ENSMMNG00015020353) C9orf72 (ENSMMNG00015020313) LINGO2 (ENSMMNG00015020298) Vaquita MODERN SPECIES 17 ENSPSNG00000001095 IFNB1 (ENSPSNG00000001113) ENSPSNG00000001121 ENSPSNG00000001130 ENSPSNG00000001145 ENSPSNG00000001161 ENSPSNG00000001176 ENSPSNG00000001196 ENSPSNG00000001205 IFNE (ENSPSNG00000001235) ENSPSNG00000001246 MTAP (ENSPSNG00000001269) #19 CDKN2A (ENSPSNG00000001297) #20 CDKN2B (ENSPSNG00000001319) #21 ENSPSNG00000001333 DMRTA1 (ENSPSNG00000001426) #22 ENSPSNG00000001438 ELAVL2 (ENSPSNG00000001471) #23 IZUMO3 (ENSPSNG00000001537) #24 ENSPSNG00000001579 TUSC1 (ENSPSNG00000001586) CAAP1 (ENSPSNG00000001609) PLAA (ENSPSNG00000001649) IFT74 (ENSPSNG00000001698) LRRC19 (ENSPSNG00000001725) TEK (ENSPSNG00000001842) ENSPSNG00000001974 MOB3B (ENSPSNG00000001987) IFNK (ENSPSNG00000002003) C9orf72 (ENSPSNG00000002018) LINGO2 (ENSPSNG00000002038) Sperm whale MODERN SPECIES 20 ENSPCTG00005015884 FOCAD (ENSPCTG00005015965) #16 HACD4 (ENSPCTG00005016218) #17 IFNB1 (ENSPCTG00005016262) ENSPCTG00005016273 ENSPCTG00005016288 ENSPCTG00005016338 ENSPCTG00005016427 ENSPCTG00005016562 ENSPCTG00005016584 IFNE (ENSPCTG00005016639) ENSPCTG00005016658 MTAP (ENSPCTG00005016695) #19 CDKN2A (ENSPCTG00005016737) #20 CDKN2B (ENSPCTG00005016790) #21 DMRTA1 (ENSPCTG00005016828) #22 ELAVL2 (ENSPCTG00005016896) #23 IZUMO3 (ENSPCTG00005017059) #24 TUSC1 (ENSPCTG00005017226) CAAP1 (ENSPCTG00005017264) PLAA (ENSPCTG00005017333) IFT74 (ENSPCTG00005017400) LRRC19 (ENSPCTG00005017494) TEK (ENSPCTG00005017578) ENSPCTG00005018255 MOB3B (ENSPCTG00005018315) IFNK (ENSPCTG00005018354) C9orf72 (ENSPCTG00005018375) LINGO2 (ENSPCTG00005018442) ENSPCTG00005018459 ENSPCTG00005000498 Blue whale MODERN SPECIES 17 ENSBMSG00010000172 ENSBMSG00010000162 ENSBMSG00010000146 ENSBMSG00010000120 ENSBMSG00010000101 ENSBMSG00010002714 ENSBMSG00010002708 ENSBMSG00010002688 ENSBMSG00010002680 ENSBMSG00010002675 ENSBMSG00010002667 IFNE (ENSBMSG00010002658) ENSBMSG00010002649 MTAP (ENSBMSG00010002632) #19 CDKN2A (ENSBMSG00010002601) #20 DMRTA1 (ENSBMSG00010002547) #22 ENSBMSG00010002538 ELAVL2 (ENSBMSG00010002512) #23 ENSBMSG00010002482 IZUMO3 (ENSBMSG00010002457) #24 TUSC1 (ENSBMSG00010002418) CAAP1 (ENSBMSG00010002383) PLAA (ENSBMSG00010002358) LRRC19 (ENSBMSG00010002326) IFT74 (ENSBMSG00010002307) TEK (ENSBMSG00010002226) ENSBMSG00010002164 MOB3B (ENSBMSG00010002146) IFNK (ENSBMSG00010002135) C9orf72 (ENSBMSG00010002120) LINGO2 (ENSBMSG00010002102) Pecora ANCESTRAL SPECIES 30 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.a.b.h ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 Percora_a ANCESTRAL SPECIES 24 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b.b ENSGT01100000263642 ENSGT01000000214430.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b.h ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT01100000266201 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 Bovidae ANCESTRAL SPECIES 14 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT00990000211532 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b.b ENSGT01100000263642 ENSGT01000000214430.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT00940000165099 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT01100000266201 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 Bovinae ANCESTRAL SPECIES 39 ENSGT01000000214430.a.a.a.a.a.a.b.l.a.b ENSGT01000000214430.a.a.a.a.b.g.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.ab ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 ENSGT00940000158555.i.b Bos ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.b.g.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.ab ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.b ENSGT00950000182991.B.z #19 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.y #19 ENSGT00940000165099 ENSGT00390000007552.f ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00550000074873.bb.b ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 Bos_a ANCESTRAL SPECIES 50 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.y #19 ENSGT00940000162423 #21 ENSGT00940000154902.bb.a ENSGT00940000154902.bb.b ENSGT00390000007552.f ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00550000074873.bb.b ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000185419 Wild yak MODERN SPECIES 114 IFNE (ENSBMUG00000011687) MTAP (ENSBMUG00000011674) #19 ENSBMUG00000011637 DMRTA1 (ENSBMUG00000011546) #22 Domestic yak MODERN SPECIES 26 ENSBGRG00000002413 KLHL9 (ENSBGRG00000002421) #18 ENSBGRG00000002434 ENSBGRG00000002439 ENSBGRG00000002442 ENSBGRG00000002447 ENSBGRG00000002456 ENSBGRG00000002462 ENSBGRG00000002472 ENSBGRG00000002476 ENSBGRG00000002505 IFNE (ENSBGRG00000002520) ENSBGRG00000002533 #19 ENSBGRG00000002560 #21 ENSBGRG00000002626 DMRTA1 (ENSBGRG00000002642) #22 ELAVL2 (ENSBGRG00000002663) #23 IZUMO3 (ENSBGRG00000002804) #24 TUSC1 (ENSBGRG00000002852) ENSBGRG00000000412 CAAP1 (ENSBGRG00000000429) PLAA (ENSBGRG00000000455) IFT74 (ENSBGRG00000000512) LRRC19 (ENSBGRG00000000556) TEK (ENSBGRG00000000666) ENSBGRG00000001020 MOB3B (ENSBGRG00000001067) ENSBGRG00000001104 C9orf72 (ENSBGRG00000001111) ENSBGRG00000001152 LINGO2 (ENSBGRG00000001159) Bos_b ANCESTRAL SPECIES 3 ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.ab ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.z #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00390000007552.f ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT01100000263474.a.b.b.f.g.a.a.a ENSGT00550000074873.bb.b ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00950000184123 ENSGT01000000214430.b ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 Hybrid Bos Indicus MODERN SPECIES 27 ENSBIXG00005005565 ENSBIXG00005025521 ENSBIXG00005025546 ENSBIXG00005025571 ENSBIXG00005025592 ENSBIXG00005025621 ENSBIXG00005025672 ENSBIXG00005025679 ENSBIXG00005025752 ENSBIXG00005007739 ENSBIXG00005025926 MTAP (ENSBIXG00005004427) #19 CDKN2A (ENSBIXG00005026038) #20 CDKN2B (ENSBIXG00005004453) #21 ENSBIXG00005007636 DMRTA1 (ENSBIXG00005026148) #22 ELAVL2 (ENSBIXG00005026326) #23 IZUMO3 (ENSBIXG00005026432) #24 TUSC1 (ENSBIXG00005004523) ENSBIXG00005026478 ENSBIXG00005004531 CAAP1 (ENSBIXG00005026525) ENSBIXG00005026532 PLAA (ENSBIXG00005026552) LRRC19 (ENSBIXG00005026561) IFT74 (ENSBIXG00005004546) TEK (ENSBIXG00005026764) ENSBIXG00005002481 IFNK (ENSBIXG00005004601) C9orf72 (ENSBIXG00005026955) LINGO2 (ENSBIXG00005026982) Cow MODERN SPECIES 27 IFNAG (ENSBTAG00000046443) KLHL9 (ENSBTAG00000012375) #18 ENSBTAG00000055152 ENSBTAG00000054099 IFN-TAU (ENSBTAG00000047698) ENSBTAG00000048891 ENSBTAG00000054206 ENSBTAG00000025928 IFN-tau-c1 (ENSBTAG00000053469) IFNT2 (ENSBTAG00000053027) IFNT3 (ENSBTAG00000050661) IFNE (ENSBTAG00000039069) ENSBTAG00000025929 #19 CDKN2A (ENSBTAG00000034220) CDKN2B (ENSBTAG00000051567) #21 DMRTA1 (ENSBTAG00000001315) #22 ELAVL2 (ENSBTAG00000046348) #23 IZUMO3 (ENSBTAG00000023412) #24 TUSC1 (ENSBTAG00000008551) ENSBTAG00000052519 ATP6V0C (ENSBTAG00000026428) CAAP1 (ENSBTAG00000001223) PLAA (ENSBTAG00000013011) LRRC19 (ENSBTAG00000043983) IFT74 (ENSBTAG00000019568) TEK (ENSBTAG00000020148) EQTN (ENSBTAG00000034391) IFNK (ENSBTAG00000006853) MOB3B (ENSBTAG00000000804) C9orf72 (ENSBTAG00000010059) LINGO2 (ENSBTAG00000016070) American bison MODERN SPECIES 3240 ENSBBBG00000018170 ENSBBBG00000018163 ENSBBBG00000009067 ENSBBBG00000018145 ENSBBBG00000006857 IFNE (ENSBBBG00000018139) MTAP (ENSBBBG00000018131) #19 CDKN2A (ENSBBBG00000007436) #20 ENSBBBG00000018093 ENSBBBG00000018086 ENSBBBG00000004445 DMRTA1 (ENSBBBG00000018078) #22 ELAVL2 (ENSBBBG00000018068) #23 IZUMO3 (ENSBBBG00000018026) #24 TUSC1 (ENSBBBG00000008010) ENSBBBG00000004430 CAAP1 (ENSBBBG00000017988) PLAA (ENSBBBG00000017959) IFT74 (ENSBBBG00000017924) LRRC19 (ENSBBBG00000017856) TEK (ENSBBBG00000008384) MOB3B (ENSBBBG00000017671) IFNK (ENSBBBG00000017664) C9orf72 (ENSBBBG00000017654) LINGO2 (ENSBBBG00000017617) ENSBBBG00000017613 ENSBBBG00000017610 Caprinae ANCESTRAL SPECIES 43 ENSGT01100000263642.c.b.a.b ENSGT01000000214430.a.b.n.b ENSGT01000000214430.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.bb.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.bb.b.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b.h ENSGT01000000214430.a.a.a.a.a.b.bb.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT01100000266201 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01000000214430.b ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Rambouillet Sheep MODERN SPECIES 11 KLHL9 (ENSOARG00020007161) #18 IFND (ENSOARG00020007178) ENSOARG00020007193 ENSOARG00020007216 ENSOARG00020007263 ENSOARG00020007314 ENSOARG00020007372 ENSOARG00020007392 IFNT6 (ENSOARG00020007406) TP-1P8 (ENSOARG00020007442) ENSOARG00020007481 IFNE (ENSOARG00020007524) ENSOARG00020007545 #19 CDKN2A (ENSOARG00020007568) #20 CDKN2B (ENSOARG00020007616) #21 DMRTA1 (ENSOARG00020007643) #22 ELAVL2 (ENSOARG00020007662) #23 ENSOARG00020007723 IZUMO3 (ENSOARG00020007782) #24 TUSC1 (ENSOARG00020007925) PLAA (ENSOARG00020008093) IFT74 (ENSOARG00020008192) LRRC19 (ENSOARG00020008306) ENSOARG00020008357 TEK (ENSOARG00020008433) MOB3B (ENSOARG00020008934) ENSOARG00020008983 IFNK (ENSOARG00020009030) C9orf72 (ENSOARG00020009060) LINGO2 (ENSOARG00020009133) ENSOARG00020009145 Goat MODERN SPECIES 27 ENSCHIG00000012674 ENSCHIG00000008290 ENSCHIG00000008596 ENSCHIG00000009514 ENSCHIG00000001968 ENSCHIG00000005142 ENSCHIG00000025046 ENSCHIG00000009474 ENSCHIG00000019572 ENSCHIG00000011025 IFNE (ENSCHIG00000008081) MTAP (ENSCHIG00000014710) #19 ENSCHIG00000018121 CDKN2A (ENSCHIG00000025939) #20 CDKN2B (ENSCHIG00000025845) #21 DMRTA1 (ENSCHIG00000023134) #22 ENSCHIG00000018988 ELAVL2 (ENSCHIG00000025894) #23 ENSCHIG00000006162 IZUMO3 (ENSCHIG00000018315) #24 ENSCHIG00000003269 TUSC1 (ENSCHIG00000012670) ENSCHIG00000026276 CAAP1 (ENSCHIG00000017091) PLAA (ENSCHIG00000014920) LRRC19 (ENSCHIG00000024759) IFT74 (ENSCHIG00000009508) TEK (ENSCHIG00000013962) EQTN (ENSCHIG00000008768) IFNK (ENSCHIG00000016395) MOB3B (ENSCHIG00000011582) Siberian musk deer MODERN SPECIES 108 ENSMMSG00000000952 ENSMMSG00000000940 ENSMMSG00000000930 ENSMMSG00000000919 ENSMMSG00000000905 ENSMMSG00000000898 ENSMMSG00000000887 ENSMMSG00000000873 ENSMMSG00000000831 ENSMMSG00000000820 ENSMMSG00000000807 ENSMMSG00000000787 ENSMMSG00000000778 ENSMMSG00000000758 #19 CDKN2A (ENSMMSG00000000727) #20 DMRTA1 (ENSMMSG00000000694) #22 ENSMMSG00000000683 ELAVL2 (ENSMMSG00000000635) #23 ENSMMSG00000000596 IZUMO3 (ENSMMSG00000000550) #24 TUSC1 (ENSMMSG00000000526) ENSMMSG00000000515 CAAP1 (ENSMMSG00000000493) PLAA (ENSMMSG00000000462) LRRC19 (ENSMMSG00000000437) IFT74 (ENSMMSG00000000361) TEK (ENSMMSG00000000195) ENSMMSG00000000118 ENSMMSG00000000106 MOB3B (ENSMMSG00000000088) C9orf72 (ENSMMSG00000000067) Yarkand deer MODERN SPECIES 21 MLLT3 (ENSCHYG00000014130) #15 FOCAD (ENSCHYG00000023701) #16 HACD4 (ENSCHYG00000023620) #17 ENSCHYG00000023601 ENSCHYG00000023588 ENSCHYG00000023573 ENSCHYG00000023566 ENSCHYG00000023495 ENSCHYG00000023454 KLHL9 (ENSCHYG00000023441) #18 ENSCHYG00000023424 IFNE (ENSCHYG00000023410) ENSCHYG00000023395 ENSCHYG00000023368 #19 ENSCHYG00000023337 #21 DMRTA1 (ENSCHYG00000023312) #22 ELAVL2 (ENSCHYG00000023207) #23 ENSCHYG00000023179 ENSCHYG00000023157 IZUMO3 (ENSCHYG00000023052) #24 ENSCHYG00000023030 TUSC1 (ENSCHYG00000023011) ENSCHYG00000022983 CAAP1 (ENSCHYG00000022921) PLAA (ENSCHYG00000022781) LRRC19 (ENSCHYG00000022730) IFT74 (ENSCHYG00000022499) TEK (ENSCHYG00000021500) ENSCHYG00000021324 C9orf72 (ENSCHYG00000021206) LINGO2 (ENSCHYG00000021182) Camelidae ANCESTRAL SPECIES 104 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 Arabian camel MODERN SPECIES 30 IFNB1 (ENSCDRG00005001381) ENSCDRG00005001391 ENSCDRG00005001399 ENSCDRG00005001408 ENSCDRG00005001419 ENSCDRG00005001435 ENSCDRG00005001540 #18 ENSCDRG00005001560 ENSCDRG00005001572 ENSCDRG00005001595 ENSCDRG00005001609 IFNE (ENSCDRG00005001617) ENSCDRG00005001627 #19 ENSCDRG00005001648 CDKN2B (ENSCDRG00005001668) #21 DMRTA1 (ENSCDRG00005001683) #22 ENSCDRG00005001690 ELAVL2 (ENSCDRG00005001709) #23 IZUMO3 (ENSCDRG00005001756) #24 ENSCDRG00005001804 CAAP1 (ENSCDRG00005001831) PLAA (ENSCDRG00005001853) IFT74 (ENSCDRG00005001917) LRRC19 (ENSCDRG00005001952) TEK (ENSCDRG00005001992) ENSCDRG00005002128 MOB3B (ENSCDRG00005002177) IFNK (ENSCDRG00005002184) C9orf72 (ENSCDRG00005002198) LINGO2 (ENSCDRG00005002218) ENSCDRG00005002221 Alpaca MODERN SPECIES 5674 DMRTA1 (ENSVPAG00000009303) #22 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000167452 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Carnivora ANCESTRAL SPECIES 18 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000167452 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Caniformia ANCESTRAL SPECIES 16 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000167452 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Caniformia_b ANCESTRAL SPECIES 12 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000167452 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00390000009268.y.b Ursidae ANCESTRAL SPECIES 6 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.nb.b ENSGT01000000214430.a.a.a.a.a.b.nb.a ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.ob ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00390000009268.y.b Ursus ANCESTRAL SPECIES 58 ENSGT01000000214430.a.a.a.a.a.b.nb.b.c.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT00390000007535.f American black bear MODERN SPECIES 7902 DMRTA1 (ENSUAMG00000009085) #22 Polar bear MODERN SPECIES 191 ENSUMAG00000005557 IFNE (ENSUMAG00000005586) MTAP (ENSUMAG00000005601) #19 CDKN2B (ENSUMAG00000005604) #21 DMRTA1 (ENSUMAG00000005623) #22 ELAVL2 (ENSUMAG00000005644) #23 IZUMO3 (ENSUMAG00000005720) #24 ENSUMAG00000005731 CAAP1 (ENSUMAG00000005736) PLAA (ENSUMAG00000005741) IFT74 (ENSUMAG00000005746) LRRC19 (ENSUMAG00000005751) TEK (ENSUMAG00000005756) MOB3B (ENSUMAG00000005779) IFNK (ENSUMAG00000005782) C9orf72 (ENSUMAG00000005785) LINGO2 (ENSUMAG00000005792) ENSUMAG00000005799 ACO1 (ENSUMAG00000005807) RIGI (ENSUMAG00000005813) Giant Panda MODERN SPECIES 17 FOCAD (ENSAMEG00000002988) #16 HACD4 (ENSAMEG00000003020) #17 ENSAMEG00000026360 IFNB1 (ENSAMEG00000020237) ENSAMEG00000003028 ENSAMEG00000027172 ENSAMEG00000020238 KLHL9 (ENSAMEG00000020249) #18 ENSAMEG00000020239 ENSAMEG00000030690 ENSAMEG00000028633 MTAP (ENSAMEG00000007509) #19 ENSAMEG00000019101 #20 CDKN2B (ENSAMEG00000007545) #21 ENSAMEG00000009154 DMRTA1 (ENSAMEG00000007553) #22 ELAVL2 (ENSAMEG00000007555) #23 IZUMO3 (ENSAMEG00000007571) #24 TUSC1 (ENSAMEG00000023759) CAAP1 (ENSAMEG00000005485) PLAA (ENSAMEG00000005498) IFT74 (ENSAMEG00000005542) LRRC19 (ENSAMEG00000005554) TEK (ENSAMEG00000001724) ENSAMEG00000001808 ENSAMEG00000001815 MOB3B (ENSAMEG00000001822) IFNK (ENSAMEG00000018552) C9orf72 (ENSAMEG00000001825) LINGO2 (ENSAMEG00000019218) ENSAMEG00000026262 Mustelinae ANCESTRAL SPECIES 98 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.b.b ENSGT01000000214430.a.a.a.a.a.b.pb.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.qb ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.a.a ENSGT01000000214430.a.a.a.a.a.b.pb.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000167452 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 American mink MODERN SPECIES 117 ENSNVIG00000012786 #15 ENSNVIG00000012773 #15 FOCAD (ENSNVIG00000012579) #16 HACD4 (ENSNVIG00000012558) #17 IFNB1 (ENSNVIG00000012557) ENSNVIG00000012545 ENSNVIG00000012526 ENSNVIG00000012512 ENSNVIG00000012495 ENSNVIG00000012477 KLHL9 (ENSNVIG00000012468) #18 ENSNVIG00000012457 ENSNVIG00000012437 MTAP (ENSNVIG00000012386) #19 CDKN2B (ENSNVIG00000012369) #21 DMRTA1 (ENSNVIG00000012357) #22 ELAV2 (ENSNVIG00000012261) #23 IZUMO3 (ENSNVIG00000012191) #24 TUSC1 (ENSNVIG00000012160) CAAP1 (ENSNVIG00000012140) PLAA (ENSNVIG00000012114) LRRC19 (ENSNVIG00000012104) IFT74 (ENSNVIG00000012021) TEK (ENSNVIG00000011869) ENSNVIG00000011848 IFNK (ENSNVIG00000011839) MOB3B (ENSNVIG00000011823) CI072 (ENSNVIG00000011758) LINGO2 (ENSNVIG00000011739) Ferret MODERN SPECIES 244 ENSMPUG00000019506 IFNG (ENSMPUG00000019499) ENSMPUG00000019818 ENSMPUG00000019816 ENSMPUG00000019811 ENSMPUG00000019808 ENSMPUG00000019804 ENSMPUG00000019803 ENSMPUG00000019801 ENSMPUG00000019798 IFNE (ENSMPUG00000015977) MTAP (ENSMPUG00000015976) #19 CDKN2A (ENSMPUG00000015974) #20 ENSMPUG00000015973 CDKN2B (ENSMPUG00000015971) #21 DMRTA1 (ENSMPUG00000015969) #22 ENSMPUG00000019796 ELAVL2 (ENSMPUG00000015967) #23 IZUMO3 (ENSMPUG00000015965) #24 ENSMPUG00000015963 CAAP1 (ENSMPUG00000015951) PLAA (ENSMPUG00000015945) LRRC19 (ENSMPUG00000015943) IFT74 (ENSMPUG00000015939) TEK (ENSMPUG00000015934) EQTN (ENSMPUG00000015926) MOB3B (ENSMPUG00000015925) IFNK (ENSMPUG00000019794) C9orf72 (ENSMPUG00000015924) ENSMPUG00000015923 ENSMPUG00000019791 Canidae ANCESTRAL SPECIES 9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.mb.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Canis_lupus ANCESTRAL SPECIES 15 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Dog MODERN SPECIES 2 MLLT3 (ENSCAFG00845014820) #15 FOCAD (ENSCAFG00845015191) #16 HACD4 (ENSCAFG00845016235) #17 IFNB1 (ENSCAFG00845016293) ENSCAFG00845016327 IFNA5 (ENSCAFG00845016367) ENSCAFG00845016397 ENSCAFG00845015906 ENSCAFG00845016083 ENSCAFG00845016109 ENSCAFG00845016139 ENSCAFG00845016171 IFNA7 (ENSCAFG00845016199) MTAP (ENSCAFG00845016288) #19 CDKN2B (ENSCAFG00845016466) #21 DMRTA1 (ENSCAFG00845016666) #22 ENSCAFG00845016700 ELAVL2 (ENSCAFG00845016769) #23 ENSCAFG00845016853 ENSCAFG00845016912 IZUMO3 (ENSCAFG00845017047) #24 ENSCAFG00845017168 TUSC1 (ENSCAFG00845017215) CAAP1 (ENSCAFG00845017294) PLAA (ENSCAFG00845017393) IFT74 (ENSCAFG00845017634) LRRC19 (ENSCAFG00845017872) TEK (ENSCAFG00845018055) ENSCAFG00845018372 ENSCAFG00845018629 MOB3B (ENSCAFG00845018684) Dingo MODERN SPECIES 366 HACD4 (ENSCAFG00020013722) #17 ENSCAFG00020013733 ENSCAFG00020013742 ENSCAFG00020013743 ENSCAFG00020013747 ENSCAFG00020013748 KLHL9 (ENSCAFG00020013752) #18 ENSCAFG00020013757 ENSCAFG00020013761 ENSCAFG00020013769 ENSCAFG00020013776 IFNE (ENSCAFG00020013779) MTAP (ENSCAFG00020013792) #19 ENSCAFG00020013796 CDKN2B (ENSCAFG00020013797) #21 DMRTA1 (ENSCAFG00020013824) #22 ELAVL2 (ENSCAFG00020013836) #23 ENSCAFG00020014371 IZUMO3 (ENSCAFG00020014376) #24 TUSC1 (ENSCAFG00020014387) CAAP1 (ENSCAFG00020014399) PLAA (ENSCAFG00020014401) IFT74 (ENSCAFG00020014404) LRRC19 (ENSCAFG00020014406) TEK (ENSCAFG00020014418) MOB3B (ENSCAFG00020014499) IFNK (ENSCAFG00020014500) C9orf72 (ENSCAFG00020014504) LINGO2 (ENSCAFG00020014541) ENSCAFG00020014544 ACO1 (ENSCAFG00020014553) Red fox MODERN SPECIES 269 KLHL9 (ENSVVUG00000008000) #18 ENSVVUG00000008014 ENSVVUG00000008019 ENSVVUG00000008026 ENSVVUG00000008029 IFNE (ENSVVUG00000008031) ENSVVUG00000008036 #19 ENSVVUG00000008043 ENSVVUG00000008048 ENSVVUG00000008072 #22 Felidae ANCESTRAL SPECIES 16 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00390000012138.a.a.i.a.a ENSGT00390000008732.a.a.c.b.a ENSGT00940000156823.e #23 ENSGT00950000183152.A.v ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 Panthera ANCESTRAL SPECIES 11 ENSGT00940000158215 #9 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00390000012138.a.a.i.a.a ENSGT00390000008732.a.a.c.b.a ENSGT00940000156823.e #23 ENSGT00950000183152.A.v ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 Tiger MODERN SPECIES 588 RPS6 (ENSPTIG00000009901) ##10 ACER2 (ENSPTIG00000009123) #11 SLC24A2 (ENSPTIG00000006232) #12 ENSPTIG00000019938 #15 ENSPTIG00000006649 #15 ENSPTIG00000019535 #15 FOCAD (ENSPTIG00000016961) #16 HACD4 (ENSPTIG00000016456) #17 IFNB1 (ENSPTIG00000006556) ENSPTIG00000015362 ENSPTIG00000012484 ENSPTIG00000006494 IFNE (ENSPTIG00000006483) MTAP (ENSPTIG00000010060) #19 ENSPTIG00000009528 DMRTA1 (ENSPTIG00000008302) #22 ELAVL2 (ENSPTIG00000005627) #23 ENSPTIG00000006398 IZUMO3 (ENSPTIG00000021039) #24 CAAP1 (ENSPTIG00000020860) PLAA (ENSPTIG00000019644) LRRC19 (ENSPTIG00000019449) IFT74 (ENSPTIG00000018434) TEK (ENSPTIG00000010193) ENSPTIG00000008460 MOB3B (ENSPTIG00000008390) Panthera_a ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00390000012138.a.a.i.a.a ENSGT00390000008732.a.a.c.b.a ENSGT00940000156823.e #23 ENSGT00950000183152.A.v ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 lion MODERN SPECIES 13 ENSPLOG00000005809 IL33 (ENSPLOG00000005762) TPD52L3 (ENSPLOG00000005730) UHRF2 (ENSPLOG00000005717) GLDC (ENSPLOG00000005598) KDM4C (ENSPLOG00000005468) DMAC1 (ENSPLOG00000005410) PTPRD (ENSPLOG00000022133) TYRP1 (ENSPLOG00000021962) LURAP1L (ENSPLOG00000021948) MPDZ (ENSPLOG00000021010) ENSPLOG00000020743 IFNE (ENSPLOG00000020717) MTAP (ENSPLOG00000020698) #19 CDKN2B (ENSPLOG00000020634) #21 DMRTA1 (ENSPLOG00000020604) #22 ENSPLOG00000020597 ENSPLOG00000020585 ELAVL2 (ENSPLOG00000020522) #23 ENSPLOG00000020502 IZUMO3 (ENSPLOG00000020427) #24 TUSC1 (ENSPLOG00000020292) CAAP1 (ENSPLOG00000020232) PLAA (ENSPLOG00000020119) LRRC19 (ENSPLOG00000020088) IFT74 (ENSPLOG00000020064) TEK (ENSPLOG00000019607) MOB3B (ENSPLOG00000019495) IFNK (ENSPLOG00000019484) C9orf72 (ENSPLOG00000019440) LINGO2 (ENSPLOG00000019417) leopard MODERN SPECIES 133 IFNE (ENSPPRG00000012513) MTAP (ENSPPRG00000019253) #19 ENSPPRG00000019225 #20 ENSPPRG00000018980 CDKN2B (ENSPPRG00000018675) #21 DMRTA1 (ENSPPRG00000018624) #22 ENSPPRG00000012506 ENSPPRG00000012498 ELAVL2 (ENSPPRG00000018510) #23 ENSPPRG00000012485 IZUMO3 (ENSPPRG00000017890) #24 TUSC1 (ENSPPRG00000012467) Cat MODERN SPECIES 244 SLC24A2 (ENSFCAG00000010086) #12 ENSFCAG00000048731 MLLT3 (ENSFCAG00000023293) #15 FOCAD (ENSFCAG00000004596) #16 ENSFCAG00000049870 HACD4 (ENSFCAG00000031990) #17 IFNB1 (ENSFCAG00000004604) ENSFCAG00000023458 KLHL9 (ENSFCAG00000012623) #18 IFNA13 (ENSFCAG00000045072) IFNA7 (ENSFCAG00000046651) IFNW12 (ENSFCAG00000044935) MTAP (ENSFCAG00000038221) #19 CDKN2A (ENSFCAG00000022826) ENSFCAG00000038878 DMRTA1 (ENSFCAG00000014743) #22 ENSFCAG00000040447 ENSFCAG00000040593 ELAVL2 (ENSFCAG00000011976) #23 ENSFCAG00000025255 IZUMO3 (ENSFCAG00000015750) #24 CAAP1 (ENSFCAG00000022307) PLAA (ENSFCAG00000023980) IFT74 (ENSFCAG00000026070) LRRC19 (ENSFCAG00000025095) TEK (ENSFCAG00000002830) MOB3B (ENSFCAG00000012089) EQTN (ENSFCAG00000040310) C9orf72 (ENSFCAG00000001914) LINGO2 (ENSFCAG00000007073) ENSFCAG00000048601 Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B.r #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Equus ANCESTRAL SPECIES 37 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b.q ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b.r ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.a.b.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.r.b #19 ENSGT00950000182991.B.r.a #19 ENSGT00950000182991.B.q #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT00950000184123 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Horse MODERN SPECIES 15 HACD4 (ENSECAG00000000343) #17 IF1DA2 (ENSECAG00000057166) IF1CA1 (ENSECAG00000040808) IF1CA2 (ENSECAG00000042982) ENSECAG00000047150 KLHL9 (ENSECAG00000005817) #18 IFN-OMEGA2 (ENSECAG00000036561) ENSECAG00000031604 ENSECAG00000054830 IFNE (ENSECAG00000004315) ENSECAG00000037786 ENSECAG00000033009 #19 ENSECAG00000040430 #19 ENSECAG00000060049 #19 CDKN2A (ENSECAG00000018552) #20 DMRTA1 (ENSECAG00000019138) #22 ELAVL2 (ENSECAG00000020142) #23 IZUMO3 (ENSECAG00000014102) #24 ENSECAG00000047777 CAAP1 (ENSECAG00000018209) PLAA (ENSECAG00000020120) IFT74 (ENSECAG00000021030) LRRC19 (ENSECAG00000016547) TEK (ENSECAG00000016566) ENSECAG00000030328 EQTN (ENSECAG00000021018) MOB3B (ENSECAG00000021621) IFNK (ENSECAG00000021633) C9orf72 (ENSECAG00000022028) ENSECAG00000046957 ENSECAG00000043521 Donkey MODERN SPECIES 15 ENSEASG00005025577 ENSEASG00005031204 ENSEASG00005038467 ENSEASG00005027754 ENSEASG00005022439 ENSEASG00005028745 ENSEASG00005029456 ENSEASG00005032209 ENSEASG00005022446 ENSEASG00005030405 #19 ENSEASG00005029169 #19 ENSEASG00005025758 #19 ENSEASG00005033213 CDKN2A (ENSEASG00005004708) #20 CDKN2B (ENSEASG00005029765) #21 DMRTA1 (ENSEASG00005036106) #22 ELAVL2 (ENSEASG00005004697) #23 IZUMO3 (ENSEASG00005031755) #24 CAAP1 (ENSEASG00005004687) PLAA (ENSEASG00005004682) LRRC19 (ENSEASG00005004679) IFT74 (ENSEASG00005004662) ENSEASG00005004648 IFNK (ENSEASG00005004640) MOB3B (ENSEASG00005004638) C9orf72 (ENSEASG00005004632) ENSEASG00005029524 LINGO2 (ENSEASG00005004629) ACO1 (ENSEASG00005004602) TOPORS (ENSEASG00005004584) RIGI (ENSEASG00005004589) Chiroptera ANCESTRAL SPECIES 40 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B.r #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 Microchiroptera ANCESTRAL SPECIES 36 ENSGT00390000009819.a.b.a.a.b.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e #18 ENSGT01000000214430.a.a.b ENSGT00950000182991.B.r #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000154367.b.o.b Greater horseshoe bat MODERN SPECIES 3 ENSRFEG00010007907 ENSRFEG00010007861 KLHL9 (ENSRFEG00010007851) #18 ENSRFEG00010007820 ENSRFEG00010007732 ENSRFEG00010007711 ENSRFEG00010007636 ENSRFEG00010007618 ENSRFEG00010007545 ENSRFEG00010007530 IFNE (ENSRFEG00010007517) ENSRFEG00010007503 MTAP (ENSRFEG00010007485) #19 CDKN2A (ENSRFEG00010007449) #20 CDKN2B (ENSRFEG00010007418) #21 DMRTA1 (ENSRFEG00010007378) #22 ENSRFEG00010007353 ELAVL2 (ENSRFEG00010007282) #23 IZUMO3 (ENSRFEG00010007098) #24 TUSC1 (ENSRFEG00010007065) CAAP1 (ENSRFEG00010007004) PLAA (ENSRFEG00010006913) LRRC19 (ENSRFEG00010006861) IFT74 (ENSRFEG00010006800) TEK (ENSRFEG00010006469) MOB3B (ENSRFEG00010019145) IFNK (ENSRFEG00010019129) C9orf72 (ENSRFEG00010019054) LINGO2 (ENSRFEG00010019029) ACO1 (ENSRFEG00010018977) ENSRFEG00010018955 Microbat MODERN SPECIES 1208 DMRTA1 (ENSMLUG00000013312) #22 ELAVL2 (ENSMLUG00000014210) #23 ENSMLUG00000028570 Megabat MODERN SPECIES 7001 DMRTA1 (ENSPVAG00000011810) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000160640 #22 Common shrew MODERN SPECIES 11504 ENSSARG00000007336 #22 Hedgehog MODERN SPECIES 12429 DMRTA1 (ENSEEUG00000010425) #22 Atlantogenata ANCESTRAL SPECIES 12 ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Afrotheria ANCESTRAL SPECIES ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT00390000007535 Afrotheria_a ANCESTRAL SPECIES ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017601 #24 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a Elephant MODERN SPECIES 472 SLC24A2 (ENSLAFG00000017523) #12 MLLT3 (ENSLAFG00000002042) #15 FOCAD (ENSLAFG00000011670) #16 HACD4 (ENSLAFG00000011684) #17 IFNB1 (ENSLAFG00000031186) ENSLAFG00000032702 ENSLAFG00000026307 ENSLAFG00000032074 ENSLAFG00000029104 ENSLAFG00000030457 ENSLAFG00000027976 ENSLAFG00000031123 MTAP (ENSLAFG00000009552) #19 ENSLAFG00000009554 CDKN2B (ENSLAFG00000022894) #21 DMRTA1 (ENSLAFG00000013860) #22 ELAVL2 (ENSLAFG00000009938) #23 ENSLAFG00000026655 IZUMO3 (ENSLAFG00000006472) #24 TUSC1 (ENSLAFG00000013180) CAAP1 (ENSLAFG00000010933) ENSLAFG00000010935 LRRC19 (ENSLAFG00000009391) IFT74 (ENSLAFG00000012358) TEK (ENSLAFG00000009659) EQTN (ENSLAFG00000008794) MOB3B (ENSLAFG00000008800) IFNK (ENSLAFG00000004739) C9orf72 (ENSLAFG00000008980) LINGO2 (ENSLAFG00000007957) ENSLAFG00000028487 Hyrax MODERN SPECIES 8181 ENSPCAG00000015491 #22 Tenrec MODERN SPECIES 6919 ENSETEG00000010470 #22 Xenarthra ANCESTRAL SPECIES 915 ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423 #21 ENSGT00940000160640 #22 Armadillo MODERN SPECIES 1325 FAM83C (ENSDNOG00000034661) UQCC1 (ENSDNOG00000044074) ENSDNOG00000048961 ENSDNOG00000049315 ENSDNOG00000035377 ENSDNOG00000031846 ENSDNOG00000041724 ENSDNOG00000047176 ENSDNOG00000040346 ENSDNOG00000049760 ENSDNOG00000031518 ENSDNOG00000043902 MTAP (ENSDNOG00000008670) #19 ENSDNOG00000011307 CDKN2B (ENSDNOG00000000334) #21 DMRTA1 (ENSDNOG00000036462) #22 ENSDNOG00000045256 Sloth MODERN SPECIES 8519 DMRTA1 (ENSCHOG00000000826) #22 Marsupialia ANCESTRAL SPECIES 6 ENSGT00950000182910.a.b ENSGT00940000160714 ENSGT00940000156806 ENSGT00940000153558.b ENSGT00940000155007 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.a.a.c.a.a ENSGT00950000182991.B #19 ENSGT00940000165099 ENSGT00940000162423.a #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Marsupialia_b ANCESTRAL SPECIES 18 ENSGT01000000214430.a.a.a.c.a.a ENSGT00950000182991.B #19 ENSGT00940000162423.a #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 Diprotodontia ANCESTRAL SPECIES 75 ENSGT01000000214430.a.a.a.c.a.a ENSGT00950000182991.B #19 ENSGT00940000162423.a #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 Diprotodontia_a ANCESTRAL SPECIES 52 ENSGT00960000186843 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00940000164186.a ENSGT00390000005897 ENSGT00940000158196 ENSGT00940000159053 ENSGT00940000157484 ENSGT00940000160540 ENSGT00940000153947.A ENSGT00550000074872 ENSGT01000000214430.a.a.a.c.a.a.a ENSGT00950000182991.B #19 ENSGT00940000162423.a #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT01020000230598 ENSGT00390000007535 koala MODERN SPECIES 298 ENSPCIG00000010226 ROR2 (ENSPCIG00000010230) ENSPCIG00000037332 ENSPCIG00000030719 ENSPCIG00000031736 ENSPCIG00000031290 MTAP (ENSPCIG00000011680) #19 ENSPCIG00000011682 ENSPCIG00000011683 #21 ENSPCIG00000011685 #21 ENSPCIG00000011686 DMRTA1 (ENSPCIG00000033586) #22 Common wonbat MODERN SPECIES 1066 MCC (ENSVURG00010006942) DIRAS2 (ENSVURG00010006925) SYK (ENSVURG00010006902) AUH (ENSVURG00010006880) NFIL3 (ENSVURG00010006871) ROR2 (ENSVURG00010006863) ENSVURG00010006858 ENSVURG00010006835 ENSVURG00010006802 ENSVURG00010006786 ENSVURG00010006769 MTAP (ENSVURG00010006757) #19 ENSVURG00010006754 ENSVURG00010006749 CDKN2B (ENSVURG00010006741) #21 DMRTA1 (ENSVURG00010006734) #22 ELAVL2 (ENSVURG00010006699) #23 ENSVURG00010006681 ENSVURG00010006661 ENSVURG00010006647 ENSVURG00010006632 ENSVURG00010006621 ENSVURG00010006602 CAAP1 (ENSVURG00010006584) PLAA (ENSVURG00010006575) LRRC19 (ENSVURG00010006571) IFT74 (ENSVURG00010006558) TEK (ENSVURG00010006447) ENSVURG00010006427 MOB3B (ENSVURG00010006420) C9orf72 (ENSVURG00010006400) Wallaby MODERN SPECIES 8454 ENSMEUG00000008505 #22 Opossum MODERN SPECIES 5 ENSMODG00000039561 #15 ENSMODG00000038835 #15 FOCAD (ENSMODG00000003634) #16 HACD4 (ENSMODG00000003655) #17 ifn1 (ENSMODG00000025165) ENSMODG00000003667 ifn7 (ENSMODG00000038103) ifn4 (ENSMODG00000049005) ENSMODG00000045309 ENSMODG00000003707 ENSMODG00000042661 ifn2 (ENSMODG00000042457) MTAP (ENSMODG00000003781) #19 CDKN2A (ENSMODG00000003820) CDKN2B (ENSMODG00000040122) #21 DMRTA1 (ENSMODG00000003829) #22 ENSMODG00000003880 ELAVL2 (ENSMODG00000003936) #23 ENSMODG00000047560 ENSMODG00000028074 ENSMODG00000045961 ENSMODG00000048618 ENSMODG00000028960 TUSC1 (ENSMODG00000004001) ENSMODG00000038345 PLAA (ENSMODG00000004155) IFT74 (ENSMODG00000004236) LRRC19 (ENSMODG00000004246) TEK (ENSMODG00000004269) ENSMODG00000004305 MOB3B (ENSMODG00000004294) Platypus MODERN SPECIES 88 CSNK1G3 (ENSOANG00000011556) ZNF608 (ENSOANG00000014652) ENSOANG00000042557 ENSOANG00000014072 ENSOANG00000045009 ENSOANG00000049707 ALDH7A1 (ENSOANG00000002544) PHAX (ENSOANG00000012052) ENSOANG00000041735 ENSOANG00000048601 ENSOANG00000040947 LMNB1 (ENSOANG00000011225) ENSOANG00000045164 MTAP (ENSOANG00000013963) #19 ENSOANG00000037223 #21 DMRTA1 (ENSOANG00000002763) #22 ELAVL2 (ENSOANG00000009634) #23 ENSOANG00000042518 CAAP1 (ENSOANG00000013234) PLAA (ENSOANG00000028747) IFT74 (ENSOANG00000013232) ENSOANG00000032036 LRRC19 (ENSOANG00000022516) TEK (ENSOANG00000013231) ENSOANG00000010599 MOB3B (ENSOANG00000000338) ENSOANG00000044403 C9orf72 (ENSOANG00000000337) LINGO2 (ENSOANG00000000336) ENSOANG00000040865 ENSOANG00000005426 Sauria ANCESTRAL SPECIES 5 ENSGT00940000156243 ENSGT00950000185213 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.c ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a Lepidosauria ANCESTRAL SPECIES 1 ENSGT00950000185213 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.c ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Episquamata ANCESTRAL SPECIES 6 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT00990000211106 ENSGT01000000214430.c ENSGT00950000182991.B #19 ENSGT00940000162423 #21 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d.a ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT00990000211106 ENSGT01000000214430.c ENSGT00950000182991.B #19 ENSGT00940000162423 #21 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d.a ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e ENSGT00390000007535 Elapidae ANCESTRAL SPECIES 7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT01000000214430.d.b ENSGT00990000211106 ENSGT01000000214430.c.h.a.a ENSGT01000000214430.c.g.b ENSGT00950000182991.B #19 ENSGT00940000162423 #21 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840.c ENSGT00390000014547 ENSGT01070000254102 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d.a ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a Indian cobra MODERN SPECIES 1 ENSNNAG00000007412 ENSNNAG00000007397 ENSNNAG00000007387 ENSNNAG00000007373 ENSNNAG00000007356 ENSNNAG00000007342 ENSNNAG00000007198 ENSNNAG00000013368 ENSNNAG00000013344 ENSNNAG00000013319 ENSNNAG00000013303 MTAP (ENSNNAG00000013279) #19 CDKN2B (ENSNNAG00000013257) #21 CDKN2A (ENSNNAG00000013215) #20 ENSNNAG00000013208 DMRTA1 (ENSNNAG00000013186) #22 ELAVL2 (ENSNNAG00000012976) #23 CAAP1 (ENSNNAG00000012949) PLAA (ENSNNAG00000012916) LRRC19 (ENSNNAG00000012889) IFT74 (ENSNNAG00000012824) ENSNNAG00000012746 ENSNNAG00000012699 ENSNNAG00000012677 MOB3B (ENSNNAG00000012660) ENSNNAG00000012632 C9orf72 (ENSNNAG00000012579) LINGO2 (ENSNNAG00000012568) ENSNNAG00000012556 ENSNNAG00000012514 ACO1 (ENSNNAG00000011283) Elapidae_a ANCESTRAL SPECIES 76 ENSGT01000000214430.c.g.a ENSGT01000000214430.c.g.b ENSGT00950000182991.B #19 ENSGT00940000162423 #21 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840.c ENSGT00390000014547 ENSGT01070000254102 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d.a ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a Blue-lipped sea krait MODERN SPECIES 9337 DMRTA1 (ENSLLTG00000015552) #22 Acanthophiinae ANCESTRAL SPECIES 72 ENSGT01000000214430.c.g.a ENSGT01000000214430.c.g.b ENSGT00950000182991.B #19 ENSGT00940000162423 #21 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840.c ENSGT00390000014547 ENSGT01070000254102 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d.a ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a Eastern brown snake MODERN SPECIES 111 ENSPTXG00000018544 ENSPTXG00000018543 MTAP (ENSPTXG00000018540) #19 CDKN2B (ENSPTXG00000018539) #21 CDKN2A (ENSPTXG00000018538) #20 DMRTA1 (ENSPTXG00000018536) #22 ELAVL2 (ENSPTXG00000018512) #23 Lizard MODERN SPECIES 1 SLC24A2 (ENSACAG00000017625) #12 MLLT3 (ENSACAG00000017614) #15 FOCAD (ENSACAG00000017585) #16 HACD4 (ENSACAG00000028887) #17 ENSACAG00000037340 ENSACAG00000026778 ENSACAG00000043191 ENSACAG00000042281 ENSACAG00000017580 ENSACAG00000025902 ENSACAG00000017572 ENSACAG00000024853 ENSACAG00000027003 MTAP (ENSACAG00000017549) #19 ENSACAG00000017544 DMRTA1 (ENSACAG00000017537) #22 ENSACAG00000043252 ELAVL2 (ENSACAG00000017521) #23 ENSACAG00000043694 CAAP1 (ENSACAG00000017515) PLAA (ENSACAG00000017506) LRRC19 (ENSACAG00000028864) IFT74 (ENSACAG00000028763) ENSACAG00000045268 ENSACAG00000017459 PGAP4 (ENSACAG00000017458) ALDOB (ENSACAG00000017436) MRPL50 (ENSACAG00000039458) PLPPR1 (ENSACAG00000017418) ENSACAG00000039290 ENSACAG00000017412 Laterata ANCESTRAL SPECIES 7 ENSGT00390000007252.c ENSGT00390000008250 #7 ENSGT00950000182920.b.a.b.a.b #8 ENSGT00940000158215 #9 ENSGT00390000009819.a.a ##10 ENSGT00730000110920.b.a.b #11 ENSGT01030000234532.B.e.a #12 ENSGT00940000155903 #15 ENSGT00390000004438 #16 ENSGT00530000062962.b.b #17 ENSGT00990000211106 ENSGT01000000214430.c ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000162423 #21 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d.a ENSGT01070000257213 ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a Common wall lizard MODERN SPECIES 8 PLIN2 (ENSPMRG00000020937) #8 ENSPMRG00000020930 HAUS6 (ENSPMRG00000020914) #7 SAXO1 (ENSPMRG00000020903) ADAMTSL1 (ENSPMRG00000020846) ENSPMRG00000022220 ENSPMRG00000022213 CNTLN (ENSPMRG00000022132) ENSPMRG00000022116 BNC2 (ENSPMRG00000022111) CCDC171 (ENSPMRG00000022077) PSIP1 (ENSPMRG00000022058) ENSPMRG00000022050 SNAPC3 (ENSPMRG00000022042) TTC39B (ENSPMRG00000022017) DMRTA1 (ENSPMRG00000022006) #22 ENSPMRG00000021998 ELAVL2 (ENSPMRG00000021981) #23 ENSPMRG00000021963 ENSPMRG00000021955 CAAP1 (ENSPMRG00000021942) PLAA (ENSPMRG00000021908) LRRC19 (ENSPMRG00000021898) IFT74 (ENSPMRG00000021883) TEK (ENSPMRG00000021875) ENSPMRG00000021861 MOB3B (ENSPMRG00000021854) ENSPMRG00000021849 SMC2 (ENSPMRG00000021801) ENSPMRG00000021777 PTGR1 (ENSPMRG00000021759) Argentine black and white tegu MODERN SPECIES 37 ENSSMRG00000020947 ENSSMRG00000020940 ENSSMRG00000020939 MTAP (ENSSMRG00000020938) #19 CDKN2B (ENSSMRG00000020937) #21 CDKN2A (ENSSMRG00000020936) #20 ENSSMRG00000020935 DMRTA1 (ENSSMRG00000020934) #22 ENSSMRG00000020932 ELAVL2 (ENSSMRG00000020931) #23 CAAP1 (ENSSMRG00000020930) PLAA (ENSSMRG00000020929) LRRC19 (ENSSMRG00000020928) IFT74 (ENSSMRG00000020927) TEK (ENSSMRG00000020926) ENSSMRG00000020925 MOB3B (ENSSMRG00000020922) ENSSMRG00000020921 C9orf72 (ENSSMRG00000020909) LINGO2 (ENSSMRG00000020908) ENSSMRG00000020904 ENSSMRG00000020902 ACO1 (ENSSMRG00000020901) tuatara MODERN SPECIES 539 DMRTA1 (ENSSPUG00000000741) #22 Archelosauria ANCESTRAL SPECIES 34 ENSGT01000000214430.c.b.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.d ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a Cryptodira DUPLICATION Cryptodira ANCESTRAL SPECIES 36 ENSGT01000000214430.c.b.b ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000160640.a #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621 ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Testudinoidea ANCESTRAL SPECIES 7 ENSGT00530000063926.a ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00940000154930 ENSGT00390000017970.g ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT01000000214430.c.b.b.a ENSGT00950000182991.B #19 ENSGT00940000163078.b #20 ENSGT00940000163078.a #20 ENSGT00940000160640.a #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621.a.b ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00940000154930 ENSGT00390000017970.h ENSGT00390000017970.g ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT01000000214430.c.b.b.a ENSGT00950000182991.B #19 ENSGT00940000163078.b #20 ENSGT00940000163078.a #20 ENSGT00940000160640.a #22 Goode s thornscrub tortoise MODERN SPECIES 20 MPDZ (ENSGEVG00005017577) LURAP1L (ENSGEVG00005016378) TYRP1 (ENSGEVG00005016317) ENSGEVG00005016285 ENSGEVG00005016249 PTPRD (ENSGEVG00005014461) KDM4C (ENSGEVG00005014259) GLDC (ENSGEVG00005013317) UHRF2 (ENSGEVG00005013188) KIAA2026 (ENSGEVG00005013144) ENSGEVG00005013096 ENSGEVG00005013057 MTAP (ENSGEVG00005013037) #19 ENSGEVG00005012973 #20 ENSGEVG00005012955 #20 DMRTA1 (ENSGEVG00005012898) #22 ELAVL2 (ENSGEVG00005012636) #23 ENSGEVG00005012547 CAAP1 (ENSGEVG00005012523) PLAA (ENSGEVG00005012496) LRRC19 (ENSGEVG00005012411) IFT74 (ENSGEVG00005011566) TEK (ENSGEVG00005011363) ENSGEVG00005011265 MOB3B (ENSGEVG00005011222) C9orf72 (ENSGEVG00005011174) LINGO2 (ENSGEVG00005011148) ENSGEVG00005011025 ACO1 (ENSGEVG00005010924) RIGI (ENSGEVG00005010865) TOPORS (ENSGEVG00005010840) Abingdon island giant tortoise MODERN SPECIES 932 ENSCABG00000000969 ENSCABG00000000972 ENSCABG00000000977 MTAP (ENSCABG00000000981) #19 CDKN2A (ENSCABG00000000983) #20 ENSCABG00000000985 DMRTA1 (ENSCABG00000000988) #22 Emydidae ANCESTRAL SPECIES 20 ENSGT00940000158006 ENSGT00950000182916.a.b.a.b ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804 ENSGT00940000153617.D ENSGT00940000154930 ENSGT00390000017970.g ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT01000000214430.c.b.b.a ENSGT01000000214430.c.b.b.b.a ENSGT00950000182991.B #19 ENSGT00940000163078.b #20 ENSGT00940000163078.a #20 ENSGT00940000160640.a #22 ENSGT00940000156823.e #23 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000166621.b ENSGT00940000157772 ENSGT00940000153173.a ENSGT00530000064170.e Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2473 ENSTMTG00000018920 ENSTMTG00000022903 ENSTMTG00000022912 ENSTMTG00000022936 ENSTMTG00000022941 ENSTMTG00000022943 ENSTMTG00000022944 ENSTMTG00000022946 #19 ENSTMTG00000022950 #20 ENSTMTG00000022952 #20 ENSTMTG00000022954 #22 ENSTMTG00000022959 #23 TUSC1 (ENSTMTG00000022967) ENSTMTG00000022969 ENSTMTG00000022973 ENSTMTG00000022978 ENSTMTG00000022983 ENSTMTG00000022996 ENSTMTG00000023008 ENSTMTG00000023009 ENSTMTG00000023011 ENSTMTG00000023016 ENSTMTG00000018430 ENSTMTG00000018441 ENSTMTG00000018475 ENSTMTG00000018655 Three-toed box turtle MODERN SPECIES 2488 ENSTMTG00000022438 ENSTMTG00000023084 ENSTMTG00000023085 ENSTMTG00000023094 ENSTMTG00000023102 ENSTMTG00000023104 ENSTMTG00000023105 ENSTMTG00000023107 ENSTMTG00000023109 #19 ENSTMTG00000023110 #20 ENSTMTG00000023111 #20 ENSTMTG00000023112 #22 ENSTMTG00000011041 #23 ENSTMTG00000011215 ENSTMTG00000011230 ENSTMTG00000011253 ENSTMTG00000011309 ENSTMTG00000011395 ENSTMTG00000012177 ENSTMTG00000012219 ENSTMTG00000012235 ENSTMTG00000012261 ENSTMTG00000012269 ENSTMTG00000012290 ENSTMTG00000012329 ENSTMTG00000012379 ENSTMTG00000012596 Chinese turtle MODERN SPECIES 1519 MTAP (ENSPSIG00000015464) #19 CDKN2A (ENSPSIG00000015429) #20 ENSPSIG00000000181 #22 ENSPSIG00000000172 ELAVL2 (ENSPSIG00000015330) #23 Cryptodira ANCESTRAL SPECIES ENSGT00940000160640.b #22 Testudinoidea ANCESTRAL SPECIES ENSGT00940000160640.b #22 Emydidae ANCESTRAL SPECIES ENSGT00940000160640.b #22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 27 MAPK8IP3 (ENSTMTG00000002806) ENSTMTG00000002786 JPT2 (ENSTMTG00000002778) CRAMP1 (ENSTMTG00000002756) TMEM204 (ENSTMTG00000002748) IFT140 (ENSTMTG00000002716) TELO2 (ENSTMTG00000002686) RNPS1 (ENSTMTG00000002680) ENSTMTG00000002673 ENSTMTG00000002669 AMDHD2 (ENSTMTG00000002663) ATP6V0C (ENSTMTG00000002661) TBC1D24 (ENSTMTG00000002655) NTN3 (ENSTMTG00000002631) ENSTMTG00000002619 ENSTMTG00000002613 #22 ENSTMTG00000002603 ENSTMTG00000002599 ENSTMTG00000002576 ENSTMTG00000002544 CCNF (ENSTMTG00000002342) VRK3 (ENSTMTG00000002312) ABCA3 (ENSTMTG00000002280) MCRIP2 (ENSTMTG00000002272) METTL26 (ENSTMTG00000002269) WFIKKN1 (ENSTMTG00000002264) RAB40C (ENSTMTG00000002260) PIGQ (ENSTMTG00000002241) NHLRC4 (ENSTMTG00000002234) CAPN15 (ENSTMTG00000002220) RAB11FIP3 (ENSTMTG00000002193) Three-toed box turtle MODERN SPECIES 43 ENSTMTG00000010390 ENSTMTG00000010379 ENSTMTG00000010232 ENSTMTG00000009727 ENSTMTG00000009657 ENSTMTG00000009612 ENSTMTG00000009564 ENSTMTG00000009472 ENSTMTG00000009381 ENSTMTG00000009342 ENSTMTG00000009273 ENSTMTG00000009255 ENSTMTG00000009059 ENSTMTG00000009041 ENSTMTG00000009023 ENSTMTG00000009009 #22 ENSTMTG00000008918 ENSTMTG00000008899 ENSTMTG00000008879 ENSTMTG00000008870 ENSTMTG00000008858 ENSTMTG00000008846 ENSTMTG00000008827 ENSTMTG00000008805 ENSTMTG00000008790 ENSTMTG00000008761 ENSTMTG00000008750 ENSTMTG00000008735 ENSTMTG00000008711 ENSTMTG00000008688 ENSTMTG00000008660 Anura ANCESTRAL SPECIES 55 ENSGT00950000183018.b ENSGT00940000154658.b ENSGT00940000157174 ENSGT00940000157979 ENSGT00390000014471 ENSGT00940000160867 ENSGT00390000018845.e ENSGT00940000156411 ENSGT00390000012078.b.`b ENSGT00940000156229 ENSGT00950000182991.B #19 ENSGT00940000163078 #20 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00940000165347 ENSGT01050000244898.a.a.a.b.c ENSGT00390000005644 ENSGT00940000156665 ENSGT00940000161521 ENSGT00940000162206.b ENSGT00940000160047 ENSGT00940000154197 ENSGT00940000165795 Frog MODERN SPECIES hacd4 (ENSXETG00000040140) #17 ENSXETG00000039539 nipsnap3a (ENSXETG00000000998) abca1 (ENSXETG00000000951) slc44a1 (ENSXETG00000000925) fsd1l (ENSXETG00000000909) fktn (ENSXETG00000000916) TAL2 (ENSXETG00000045275) tmem38b (ENSXETG00000000907) znf462 (ENSXETG00000005759) rad23b (ENSXETG00000005751) klf4 (ENSXETG00000005739) ENSXETG00000049369 mtap (ENSXETG00000005467) #19 cdkn2b (ENSXETG00000005465) #20 dmrta1 (ENSXETG00000005462) #22 ENSXETG00000041921 elavl2 (ENSXETG00000038617) #23 caap1 (ENSXETG00000009386) plaa (ENSXETG00000009385) ift74 (ENSXETG00000009383) ENSXETG00000036813 tek (ENSXETG00000009382) XB5934250 [provisional] (ENSXETG00000009381) mob3b (ENSXETG00000009377) c9orf72 (ENSXETG00000009376) ENSXETG00000047807 ENSXETG00000045655 ENSXETG00000042396 ENSXETG00000049011 ENSXETG00000048307 Leishan spiny toad MODERN SPECIES SLC44A1 (ENSLLEG00000001121) ENSLLEG00000001096 FSD1L (ENSLLEG00000001015) FKTN (ENSLLEG00000000973) TAL2 (ENSLLEG00000000957) TMEM38B (ENSLLEG00000000920) ENSLLEG00000000907 ENSLLEG00000000903 ZNF462 (ENSLLEG00000000859) RAD23B (ENSLLEG00000000766) KLF4 (ENSLLEG00000000747) ENSLLEG00000000745 ENSLLEG00000000656 #19 CDKN2A (ENSLLEG00000000609) #20 ENSLLEG00000000594 DMRTA1 (ENSLLEG00000000586) #22 ENSLLEG00000000574 ELAVL2 (ENSLLEG00000000399) #23 ENSLLEG00000000343 ENSLLEG00000000331 ENSLLEG00000000327 CAAP1 (ENSLLEG00000000312) PLAA (ENSLLEG00000000270) LRRC19 (ENSLLEG00000000240) ENSLLEG00000000213 ENSLLEG00000000203 TEK (ENSLLEG00000000184) ENSLLEG00000000118 ENSLLEG00000000104 MOB3B (ENSLLEG00000000096) C9orf72 (ENSLLEG00000000062) Coelacanth MODERN SPECIES 779 DMRTA1 (ENSLACG00000009724) #22 ENSLACG00000010491 ENSLACG00000013607 Actinopterygii ANCESTRAL SPECIES 691 ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 Reedfish MODERN SPECIES 15 MPDZ (ENSECRG00000011134) ENSECRG00000011149 LURAP1L (ENSECRG00000011151) TYRP1 (ENSECRG00000011157) MYORG (ENSECRG00000011161) aqp3a (ENSECRG00000011163) ENSECRG00000011167 ENSECRG00000011172 ube2r2 (ENSECRG00000011181) ENSECRG00000011188 ENSECRG00000011194 ela3l (ENSECRG00000011198) ENSECRG00000011202 mtap (ENSECRG00000011205) #19 TOPORS (ENSECRG00000011212) DMRTA1 (ENSECRG00000011218) #22 ENSECRG00000011232 elavl2 (ENSECRG00000011249) #23 ENSECRG00000011263 #23 CAAP1 (ENSECRG00000011292) hacd4 (ENSECRG00000011333) #17 FOCAD (ENSECRG00000011383) #16 ENSECRG00000011495 #15 ENSECRG00000011506 #15 H2AZ1 (ENSECRG00000011528) DDIT4L (ENSECRG00000011559) SLC39A8 (ENSECRG00000011574) ENSECRG00000011595 PPP3CA (ENSECRG00000011638) ENSECRG00000011663 rpl34 (ENSECRG00000011673) Neopterygii ANCESTRAL SPECIES 384 ENSGT00940000160572 ENSGT00940000155493 ENSGT00800000124172 ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 Spotted gar MODERN SPECIES 670 ATP8A1 (ENSLOCG00000012435) shisa3 (ENSLOCG00000012459) ENSLOCG00000012465 BEND4 (ENSLOCG00000012472) slc30a9 (ENSLOCG00000012479) si:ch211-175m2.5 (ENSLOCG00000012491) UBA6 (ENSLOCG00000012494) smim19 (ENSLOCG00000012509) ENSLOCG00000018070 KCNIP4 (ENSLOCG00000012515) sec24d (ENSLOCG00000012522) SYNPO2 (ENSLOCG00000012536) myoz2b (ENSLOCG00000012549) USP53 (ENSLOCG00000012556) fabp2 (ENSLOCG00000012560) DMRTA1 (ENSLOCG00000012567) #22 ENSLOCG00000012571 elavl2 (ENSLOCG00000012575) #23 CAAP1 (ENSLOCG00000012584) CDKN2B (ENSLOCG00000012588) #21 CXXC4 (ENSLOCG00000012594) TET2 (ENSLOCG00000012598) ppa2 (ENSLOCG00000012607) ARHGEF38 (ENSLOCG00000012616) ints12 (ENSLOCG00000012622) gstcd (ENSLOCG00000012628) npnta (ENSLOCG00000012639) tbck (ENSLOCG00000012644) sgms2b (ENSLOCG00000012660) papss1 (ENSLOCG00000012667) dkk2 (ENSLOCG00000012675) Osteoglossocephalai ANCESTRAL SPECIES 228 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000168167 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00390000011749 ENSGT00410000029064 Osteoglossiformes ANCESTRAL SPECIES 60 ENSGT00940000155397.a.a.a ENSGT00390000011412 ENSGT00730000111645.b ENSGT00940000157294.d.b ENSGT00390000015958.c ENSGT00940000162224 ENSGT00940000155800.a.b.b ENSGT00950000183137.b.a.f ENSGT00940000157235.h ENSGT00940000158985 ENSGT00950000182924.A.b.a.b.j ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00940000156823.e.g #23 ENSGT00510000047770.c.b ENSGT00940000156823.e.h.b #23 ENSGT00390000017010 ENSGT00940000153617.D ENSGT00940000155804.k.a ENSGT00530000063790.b.g ENSGT00940000155586.B ENSGT00940000159617.b ENSGT00390000017890.b.b ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00950000182886.a.b P. kingsleyae MODERN SPECIES 93 ENSPKIG00000006307 DMRTA1 (ENSPKIG00000006264) #22 ENSPKIG00000006226 ELAVL2 (ENSPKIG00000006187) #23 CAAP1 (ENSPKIG00000006115) PTPRD (ENSPKIG00000006054) TYRP1 (ENSPKIG00000006008) LURAP1L (ENSPKIG00000006002) ENSPKIG00000005990 ENSPKIG00000005955 ENSPKIG00000005930 ADGRL3 (ENSPKIG00000005620) ENSPKIG00000005072 ENSPKIG00000004882 DCTN6 (ENSPKIG00000004859) ENSPKIG00000004836 gtf2e2 (ENSPKIG00000004797) Asian bonytongue MODERN SPECIES 20 sepsecs (ENSSFOG00015030052) lgi2a (ENSSFOG00015018648) ENSSFOG00015025930 ccdc149a (ENSSFOG00015018593) dhx15 (ENSSFOG00015018549) PPARGC1A (ENSSFOG00015018522) gba3 (ENSSFOG00015018516) ADGRA3 (ENSSFOG00015018468) KCNIP4 (ENSSFOG00015018405) ENSSFOG00015018368 SYNPO2 (ENSSFOG00015032764) myoz2a (ENSSFOG00015018331) USP53 (ENSSFOG00015018293) ENSSFOG00015029766 FABP2 (ENSSFOG00015029809) DMRTA1 (ENSSFOG00015029453) #22 elavl2 (ENSSFOG00015027679) #23 CAAP1 (ENSSFOG00015030065) PTPRD (ENSSFOG00015018170) TYRP1 (ENSSFOG00015018063) LURAP1L (ENSSFOG00015031107) MPDZ (ENSSFOG00015018045) ENSSFOG00015017941 ENSSFOG00015017865 ENSSFOG00015030930 ENSSFOG00015032438 ADGRL3 (ENSSFOG00015017590) DCTN6 (ENSSFOG00015017515) ENSSFOG00015017481 ENSSFOG00015017448 acox3 (ENSSFOG00015017377) Clupeocephala ANCESTRAL SPECIES 364 ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000168167 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00950000182886.a.b Euteleosteomorpha ANCESTRAL SPECIES 80 ENSGT00940000157122.b.a ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 Protacanthopterygii ANCESTRAL SPECIES 181 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00540000073610.B ENSGT00940000154285.a.a.f ENSGT01070000253822.D.b.w ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 Salmoninae ANCESTRAL SPECIES 189 ENSGT00390000001189.b.i.c ENSGT00390000002596.a ENSGT00650000093871 ENSGT00540000073610.B ENSGT00940000154285.a.a.f ENSGT01070000253822.D.b.w ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01100000263491.a.b.b.c.a.b.h ENSGT00940000167160 ENSGT00510000047760.b ENSGT00950000182899.C.b ENSGT00940000158194.p ENSGT00940000167021 ENSGT00390000015545 ENSGT00940000158971 ENSGT00940000166804.d ENSGT00390000017455 ENSGT00390000000527 ENSGT00940000162334 Salmoninae_a ANCESTRAL SPECIES 101 ENSGT00940000154790.a.b.c ENSGT00510000048151.a.e ENSGT00390000013762.a.f.c.b ENSGT00940000165739.d ENSGT00390000001189.b.i.c ENSGT00390000002596.a ENSGT00540000073610.B ENSGT00940000154285.a.a.f ENSGT01070000253822.D.b.w ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01100000263491.a.b.b.c.a.b.h ENSGT00940000167160 ENSGT00940000169954 ENSGT00940000158194.p ENSGT00940000167021 ENSGT00390000015545 ENSGT00940000158971 ENSGT00940000166804.d ENSGT00390000017455 ENSGT00390000000527 ENSGT00940000162334 ENSGT00940000159264.f.c.a Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00940000156646.c.e ENSGT00940000154790.a.b.c ENSGT00510000048151.a.e ENSGT00390000013762.a.f.c.b ENSGT00390000001189.b.i.c ENSGT00390000002596.a ENSGT00540000073610.B ENSGT00940000154285.a.a.f ENSGT01070000253822.D.b.w ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01100000263491.a.b.b.c.a.b.h ENSGT00940000167160 ENSGT00940000169954 ENSGT00940000158194.p ENSGT00940000167021 ENSGT00390000015545 ENSGT01090000260859.b ENSGT00940000158971 ENSGT00940000166804.d ENSGT00390000017455 ENSGT00390000000527 ENSGT00940000162334 Oncorhynchus_a ANCESTRAL SPECIES 122 ENSGT00940000156646.c.e ENSGT00940000154790.a.b.c ENSGT00510000048151.a.e ENSGT00390000013762.a.f.c.b ENSGT00390000001189.b.i.c ENSGT00390000002596.a ENSGT00540000073610.B ENSGT00940000154285.a.a.f ENSGT01070000253822.D.b.w ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01100000263491.a.b.b.c.a.b.h ENSGT00940000167160 ENSGT00940000169954 ENSGT00940000158194.p ENSGT00940000167021 ENSGT00390000015545 ENSGT01090000260859.b ENSGT00940000166804.d ENSGT00390000017455 ENSGT00940000162334 ENSGT00940000159264.f.d ENSGT00940000159217.n Coho salmon MODERN SPECIES 29 ENSOKIG00005032565 ENSOKIG00005032552 ENSOKIG00005032531 CLDND1 (ENSOKIG00005032522) ENSOKIG00005032518 ENSOKIG00005032498 ENSOKIG00005032421 ENSOKIG00005032406 mfsd8 (ENSOKIG00005032397) ENSOKIG00005032393 ENSOKIG00005032323 SGCZ (ENSOKIG00005032308) DCTN6 (ENSOKIG00005031944) RBPMS (ENSOKIG00005031788) ENSOKIG00005031776 DMRTA1 (ENSOKIG00005031767) #22 ENSOKIG00005031747 ELAVL2 (ENSOKIG00005031407) #23 CAAP1 (ENSOKIG00005027627) ENSOKIG00005027614 ENSOKIG00005027603 ENSOKIG00005027578 ENSOKIG00005027542 ing2 (ENSOKIG00005027519) ENSOKIG00005027496 rwdd (ENSOKIG00005027445) ENSOKIG00005027431 ADAM33 (ENSOKIG00005027399) ENSOKIG00005027379 ENSOKIG00005027362 FBXO24 (ENSOKIG00005027301) Chinook salmon MODERN SPECIES 6 acadl (ENSOTSG00005002543) ENSOTSG00005002924 ENSOTSG00005002935 PAQR9 (ENSOTSG00005002938) per1b (ENSOTSG00005002942) rell1 (ENSOTSG00005002947) ENSOTSG00005002954 NWD2 (ENSOTSG00005002957) cldnd1a (ENSOTSG00005002963) ENSOTSG00005002968 ENSOTSG00005002986 SGCZ (ENSOTSG00005003004) DCTN6 (ENSOTSG00005003016) RBPMS (ENSOTSG00005003931) ENSOTSG00005003938 DMRTA1 (ENSOTSG00005003939) #22 ENSOTSG00005003940 ELAVL2 (ENSOTSG00005003944) #23 ENSOTSG00005004503 ENSOTSG00005004504 Rainbow trout MODERN SPECIES 13 ENSOMYG00000020500 ENSOMYG00000017475 ENSOMYG00000064038 ENSOMYG00000023777 ENSOMYG00000023865 ENSOMYG00000023875 ENSOMYG00000023881 ENSOMYG00000023891 ENSOMYG00000058958 ENSOMYG00000023922 ENSOMYG00000076447 ENSOMYG00000025448 ENSOMYG00000025496 ENSOMYG00000053123 ENSOMYG00000025565 DMRTA1 (ENSOMYG00000025579) #22 ENSOMYG00000076659 ENSOMYG00000025592 ENSOMYG00000025614 #23 CAAP1 (ENSOMYG00000025636) ENSOMYG00000025645 ENSOMYG00000025660 ENSOMYG00000025698 ENSOMYG00000025723 ENSOMYG00000025732 rwdd (ENSOMYG00000023754) ENSOMYG00000075246 ENSOMYG00000075650 ENSOMYG00000050463 ENSOMYG00000051456 ENSOMYG00000065021 Salmo ANCESTRAL SPECIES 49 ENSGT00390000013762.a.f.c.b ENSGT00940000165739.d ENSGT00950000182924.A.a.e ENSGT00390000002596.a ENSGT00650000093871 ENSGT00990000213768 ENSGT00540000073610.B ENSGT00940000154285.a.a.f ENSGT01070000253822.D.b.w ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01100000263491.a.b.b.c.a.b.h ENSGT00940000166428 ENSGT00510000047760.b ENSGT00950000182899.C.b ENSGT00940000158194.p ENSGT00940000167021 ENSGT00390000015545 ENSGT00940000158971 ENSGT00940000166804.d ENSGT01030000235360 ENSGT00390000017455 ENSGT00390000000527 River trout MODERN SPECIES 38 ENSSTUG00000005311 ENSSTUG00000005318 ovol1a (ENSSTUG00000005324) ENSSTUG00000005331 cldnd1a (ENSSTUG00000005348) ENSSTUG00000005358 ENSSTUG00000005371 ENSSTUG00000005391 ENSSTUG00000005610 ENSSTUG00000005651 ENSSTUG00000001107 SGCZ (ENSSTUG00000001152) DCTN6 (ENSSTUG00000001195) RBPMS (ENSSTUG00000001353) ENSSTUG00000001363 DMRTA1 (ENSSTUG00000001371) #22 ENSSTUG00000001382 ELAVL2 (ENSSTUG00000001454) #23 CAAP1 (ENSSTUG00000001641) ENSSTUG00000001647 ENSSTUG00000001650 zgc:112271 (ENSSTUG00000001656) ENSSTUG00000001662 ing2 (ENSSTUG00000001677) ENSSTUG00000001688 rwdd (ENSSTUG00000001738) ADAM33 (ENSSTUG00000001744) ENSSTUG00000001768 PAQR9 (ENSSTUG00000001786) pcolceb (ENSSTUG00000001790) per1b (ENSSTUG00000001806) Atlantic salmon MODERN SPECIES 26 ovol1a (ENSSSAG00000089795) ENSSSAG00000004107 ENSSSAG00000107874 ENSSSAG00000004487 ENSSSAG00000004293 ENSSSAG00000004444 ENSSSAG00000004327 ENSSSAG00000004284 ENSSSAG00000004254 ENSSSAG00000004126 ENSSSAG00000002771 ENSSSAG00000002712 rbpms (ENSSSAG00000002676) ENSSSAG00000116118 ENSSSAG00000002671 dmrta1 (ENSSSAG00000002664) #22 glu2b (ENSSSAG00000002648) elavl2 (ENSSSAG00000002324) #23 ENSSSAG00000094154 CAAP1 (ENSSSAG00000119180) ENSSSAG00000115843 ENSSSAG00000003008 BOLA2 (ENSSSAG00000003003) cd68 (ENSSSAG00000002993) ing2 (ENSSSAG00000002986) ENSSSAG00000002955 rwdd (ENSSSAG00000002920) ENSSSAG00000002903 lrch4 (ENSSSAG00000002854) ENSSSAG00000002828 ENSSSAG00000002818 Huchen MODERN SPECIES 3279 DMRTA1 (ENSHHUG00000006176) #22 ENSHHUG00000006165 Northern pike MODERN SPECIES 23 osbp (ENSELUG00000009428) ACY3 (ENSELUG00000009487) cldnd1a (ENSELUG00000009499) ENSELUG00000027838 ENSELUG00000009529 ENSELUG00000009597 ENSELUG00000009511 ENSELUG00000009523 ENSELUG00000033880 mfsd8 (ENSELUG00000009651) ENSELUG00000001633 SGCZ (ENSELUG00000009695) DCTN6 (ENSELUG00000009745) RBPMS (ENSELUG00000009787) FABP2 (ENSELUG00000000357) DMRTA1 (ENSELUG00000009825) #22 ENSELUG00000029680 ENSELUG00000009839 ENSELUG00000009928 elavl2 (ENSELUG00000010026) #23 ENSELUG00000031060 CAAP1 (ENSELUG00000032289) ENSELUG00000025148 ENSELUG00000010094 zgc:112271 (ENSELUG00000010118) SLX1 (ENSELUG00000030900) ENSELUG00000010141 ENSELUG00000010152 ing2 (ENSELUG00000010161) rwdd (ENSELUG00000001520) ADAM33 (ENSELUG00000010309) Acanthomorphata ANCESTRAL SPECIES 74 ENSGT00940000157122.b.a ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 Cod MODERN SPECIES 8 HGFAC (ENSGMOG00000011028) ENSGMOG00000027302 MSANTD1 (ENSGMOG00000034248) ENSGMOG00000016648 ENSGMOG00000016161 ENSGMOG00000034359 ENSGMOG00000023658 ENSGMOG00000029415 ENSGMOG00000004654 ENSGMOG00000004442 ENSGMOG00000003819 ENSGMOG00000009637 ENSGMOG00000001627 ENSGMOG00000001570 ENSGMOG00000001559 DMRTA1 (ENSGMOG00000027773) #22 ENSGMOG00000037045 ENSGMOG00000022881 #23 CAAP1 (ENSGMOG00000026706) ENSGMOG00000031961 ENSGMOG00000033136 ENSGMOG00000032765 ENSGMOG00000036695 ENSGMOG00000023585 ENSGMOG00000035261 ENSGMOG00000029055 ETNPPL (ENSGMOG00000009991) ENSGMOG00000011279 RPL34 (ENSGMOG00000009982) ENSGMOG00000025359 #12 sepsecs (ENSGMOG00000009946) Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00940000155586.A ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Pinecone sodierfish MODERN SPECIES 9 dtx4a (ENSMMDG00005011309) coro1b (ENSMMDG00005011312) osbp (ENSMMDG00005011323) ACY3 (ENSMMDG00005011360) cldnd1a (ENSMMDG00005011764) ENSMMDG00005011765 ENSMMDG00005011769 ENSMMDG00005011772 ENSMMDG00005011775 mfsd8 (ENSMMDG00005011787) ENSMMDG00005011818 SGCZ (ENSMMDG00005011821) DCTN6 (ENSMMDG00005011824) RBPMS (ENSMMDG00005011825) FABP2 (ENSMMDG00005011827) DMRTA1 (ENSMMDG00005011830) #22 ENSMMDG00005011836 elavl2 (ENSMMDG00005011843) #23 CAAP1 (ENSMMDG00005011878) ENSMMDG00005011884 ADGRL3 (ENSMMDG00005011905) MPDZ (ENSMMDG00005013814) LURAP1L (ENSMMDG00005013820) TYRP1 (ENSMMDG00005013822) PTPRD (ENSMMDG00005013826) USP53 (ENSMMDG00005013843) myoz2a (ENSMMDG00005013846) SYNPO2 (ENSMMDG00005013867) sec24d (ENSMMDG00005013882) KCNIP4 (ENSMMDG00005013889) ADGRA3 (ENSMMDG00005013961) Percomorphaceae ANCESTRAL SPECIES 18 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00940000155586.A ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00940000155586.A ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00940000155586.A ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Atherinomorphae ANCESTRAL SPECIES 22 ENSGT00940000157122.b.a ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Aplocheiloidei ANCESTRAL SPECIES 65 ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Mangrove rivulus MODERN SPECIES 29 ENSKMAG00000006583 ENSKMAG00000006564 mfsd8 (ENSKMAG00000006512) ENSKMAG00000006468 SGCZ (ENSKMAG00000006407) RBPMS (ENSKMAG00000006377) ENSKMAG00000006358 DMRTA1 (ENSKMAG00000006350) #22 ENSKMAG00000006331 elavl2 (ENSKMAG00000006299) #23 CAAP1 (ENSKMAG00000006286) ENSKMAG00000006133 ADGRL3 (ENSKMAG00000006060) MPDZ (ENSKMAG00000005956) LURAP1L (ENSKMAG00000005922) TYRP1 (ENSKMAG00000005890) PTPRD (ENSKMAG00000005817) USP53 (ENSKMAG00000005777) myoz2a (ENSKMAG00000005757) ENSKMAG00000005720 sec24d (ENSKMAG00000005695) ENSKMAG00000005659 KCNIP4 (ENSKMAG00000005612) Turquoise killifish MODERN SPECIES 1613 DTX4 (ENSNFUG00015002177) CORO1B (ENSNFUG00015002194) osbp (ENSNFUG00015000130) ACY3 (ENSNFUG00015000194) CLDND1 (ENSNFUG00015000212) ENSNFUG00015000224 ENSNFUG00015000233 MTPAP (ENSNFUG00015000245) BX470141.1 (ENSNFUG00015000266) ENSNFUG00015000281 ZNF438 (ENSNFUG00015000285) SGCZ (ENSNFUG00015000297) DCTN6 (ENSNFUG00015000312) RBPMS (ENSNFUG00015000331) FABP2 (ENSNFUG00015000342) DMRTA1 (ENSNFUG00015000348) #22 PRKCSH (ENSNFUG00015000360) elavl2 (ENSNFUG00015000395) #23 ENSNFUG00015000415 ENSNFUG00015000419 ENSNFUG00015000422 FP236812.4 (ENSNFUG00015000426) ENSNFUG00015000803 LPHN3 (ENSNFUG00015002277) ENSNFUG00015004059 ENSNFUG00015004062 MPDZ (ENSNFUG00015004270) LURAP1L (ENSNFUG00015005421) TYRP1 (ENSNFUG00015005425) ENSNFUG00015005437 ENSNFUG00015005449 Cyprinodontoidei ANCESTRAL SPECIES 21 ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Poeciliinae ANCESTRAL SPECIES 21 ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00540000073610.B.e ENSGT00540000073610.B.f ENSGT00980000198603.A ENSGT01070000253822.D.b.q.a.a ENSGT01070000253822.D.b.q.a.b ENSGT01070000253822.D.b.q.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Poecilia ANCESTRAL SPECIES 48 ENSGT00540000073610.B.e ENSGT00540000073610.B.f ENSGT00980000198603.A ENSGT01070000253822.D.b.q.a.a.a.b ENSGT01070000253822.D.b.q.a.b ENSGT01070000253822.D.b.q.a.a.a.a.a ENSGT01070000253822.D.b.q.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b.a ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 NAME_6 ANCESTRAL SPECIES 291 ENSGT00540000073610.B.e ENSGT00540000073610.B.f ENSGT00980000198603.A ENSGT01070000253822.D.b.q.a.a.a.b ENSGT01070000253822.D.b.q.a.b.b ENSGT01070000253822.D.b.q.a.a.b.b.b ENSGT01070000253822.D.b.q.a.a.a.a.a ENSGT01070000253822.D.b.q.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b.a Amazon molly MODERN SPECIES 387 ENSPFOG00000017004 mfsd8 (ENSPFOG00000017026) ENSPFOG00000017092 SGCZ (ENSPFOG00000017117) DCTN6 (ENSPFOG00000017154) RBPMS (ENSPFOG00000017158) FABP2 (ENSPFOG00000017178) DMRTA1 (ENSPFOG00000017190) #22 ENSPFOG00000023180 Sailfin molly MODERN SPECIES 360 ENSPLAG00000011048 ENSPLAG00000011023 ENSPLAG00000011008 ENSPLAG00000010965 ENSPLAG00000010944 ENSPLAG00000010918 mfsd8 (ENSPLAG00000010880) ENSPLAG00000010834 SGCZ (ENSPLAG00000010818) DCTN6 (ENSPLAG00000010791) RBPMS (ENSPLAG00000010767) FABP2 (ENSPLAG00000010726) DMRTA1 (ENSPLAG00000000817) #22 ENSPLAG00000010692 Guppy MODERN SPECIES 448 ENSPREG00000016569 ENSPREG00000016622 ENSPREG00000016630 ENSPREG00000016645 ENSPREG00000016653 ENSPREG00000016666 ENSPREG00000016690 ENSPREG00000016765 ENSPREG00000016791 mfsd8 (ENSPREG00000016815) ENSPREG00000016861 SGCZ (ENSPREG00000016904) DCTN6 (ENSPREG00000016932) RBPMS (ENSPREG00000016959) FABP2 (ENSPREG00000016995) DMRTA1 (ENSPREG00000017021) #22 ENSPREG00000017063 elavl2 (ENSPREG00000017160) #23 CAAP1 (ENSPREG00000017188) ENSPREG00000017212 ADGRL3 (ENSPREG00000017398) ENSPREG00000017839 LURAP1L (ENSPREG00000018293) TYRP1 (ENSPREG00000018301) PTPRD (ENSPREG00000018440) USP53 (ENSPREG00000018805) myoz2a (ENSPREG00000018830) ENSPREG00000018845 sec24d (ENSPREG00000018869) KCNIP4 (ENSPREG00000018931) ADGRA3 (ENSPREG00000019098) Platyfish MODERN SPECIES 5 dtx4a (ENSXMAG00000015876) coro1b (ENSXMAG00000015892) osbp (ENSXMAG00000015923) ACY3 (ENSXMAG00000015936) cldnd1a (ENSXMAG00000028728) ENSXMAG00000026245 ENSXMAG00000012538 ENSXMAG00000012542 ENSXMAG00000012545 ENSXMAG00000021162 mfsd8 (ENSXMAG00000012556) SGCZ (ENSXMAG00000012490) DCTN6 (ENSXMAG00000012493) RBPMS (ENSXMAG00000027637) FABP2 (ENSXMAG00000027561) DMRTA1 (ENSXMAG00000012522) #22 ENSXMAG00000021716 ELAVL2 (ENSXMAG00000029211) #23 CAAP1 (ENSXMAG00000022303) ENSXMAG00000004781 ADGRL3 (ENSXMAG00000004882) MPDZ (ENSXMAG00000004907) ENSXMAG00000027724 LURAP1L (ENSXMAG00000004908) TYRP1 (ENSXMAG00000004910) ENSXMAG00000028029 PTPRD (ENSXMAG00000004920) USP53 (ENSXMAG00000021530) myoz2a (ENSXMAG00000023576) ENSXMAG00000001940 sec24d (ENSXMAG00000001944) NAME_4 ANCESTRAL SPECIES 308 ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 Mummichog MODERN SPECIES 316 ENSFHEG00000009753 mfsd8 (ENSFHEG00000009958) ENSFHEG00000009983 SGCZ (ENSFHEG00000010026) DCTN6 (ENSFHEG00000010070) RBPMS (ENSFHEG00000000618) FABP2 (ENSFHEG00000010141) DMRTA1 (ENSFHEG00000010147) #22 ENSFHEG00000010157 ENSFHEG00000010266 elavl2 (ENSFHEG00000010307) #23 Sheepshead minnow MODERN SPECIES 278 ENSCVAG00000014354 DCTN6 (ENSCVAG00000000366) RBPMS (ENSCVAG00000013975) FABP2 (ENSCVAG00000013961) DMRTA1 (ENSCVAG00000013941) #22 ENSCVAG00000013933 elavl2 (ENSCVAG00000013913) #23 ENSCVAG00000013852 ENSCVAG00000013837 rtkn2 (ENSCVAG00000013823) ENSCVAG00000013799 hint1 (ENSCVAG00000013656) lyrm7 (ENSCVAG00000013634) dync2li1 (ENSCVAG00000013487) abcg5 (ENSCVAG00000013468) abcg8 (ENSCVAG00000013404) ENSCVAG00000012980 lrpprc (ENSCVAG00000012967) znhit2 (ENSCVAG00000012948) ppm1ba (ENSCVAG00000012939) Oryzias ANCESTRAL SPECIES 21 ENSGT00940000157623 ENSGT00940000160414.c ENSGT00940000163776.a.a ENSGT00940000159796.a.b ENSGT00890000139482.a ENSGT00940000155378.c.b ENSGT00390000002231.b ENSGT01060000253413 ENSGT00390000007726.b ENSGT00390000018729.b ENSGT00940000159026 ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Oryzias_a ANCESTRAL SPECIES 27 ENSGT00940000163911.a.a.a.s ENSGT00940000163911.a.a.b.a.a.a.b.a.b.b ENSGT00940000174504.B ENSGT00390000007726.b ENSGT00390000018729.b ENSGT00940000159026 ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a.h ENSGT00940000154658.a.g ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Chinese medaka MODERN SPECIES 1075 ENSOSIG00000002956 ENSOSIG00000002969 syt4 (ENSOSIG00000002978) SGCZ (ENSOSIG00000002995) RBPMS (ENSOSIG00000003091) FABP2 (ENSOSIG00000003092) DMRTA1 (ENSOSIG00000003096) #22 ENSOSIG00000003099 Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000028665 ENSORLG00000004011 ENSORLG00000027677 ENSORLG00000023331 ENSORLG00000004028 ENSORLG00000004020 ENSORLG00000004043 ENSORLG00000004069 ENSORLG00000004084 ENSORLG00000023575 syt4 (ENSORLG00000004098) ENSORLG00000004115 ENSORLG00000026244 RBPMS (ENSORLG00000004135) ENSORLG00000004146 DMRTA1 (ENSORLG00000004153) #22 ENSORLG00000004157 ENSORLG00000027845 ELAVL2 (ENSORLG00000004217) #23 ENSORLG00000022241 CAAP1 (ENSORLG00000004231) ENSORLG00000027686 ENSORLG00000028831 ENSORLG00000023983 ADGRL3 (ENSORLG00000004254) MPDZ (ENSORLG00000004290) LURAP1L (ENSORLG00000028081) TYRP1 (ENSORLG00000004326) PTPRD (ENSORLG00000004650) ENSORLG00000022754 USP53 (ENSORLG00000004686) Oryzias_b ANCESTRAL SPECIES 18 ENSGT00940000163776.a.a ENSGT00940000159796.a.b ENSGT00890000139482.a ENSGT00940000155378.c.b ENSGT00390000002231.b ENSGT01040000240385.A.a.b.a ENSGT00940000163911.a.a.b.a.a.a.b.a.a ENSGT00940000163911.a.a.b.a.a.a.b.a.b ENSGT00390000007726.b ENSGT00390000018729.b ENSGT00940000159026 ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Javanese ricefish MODERN SPECIES 9 fam113 (ENSOJAG00000023986) ENSOJAG00000023985 ENSOJAG00000023977 ENSOJAG00000023975 ENSOJAG00000023974 ENSOJAG00000023973 ENSOJAG00000023968 ENSOJAG00000023963 ENSOJAG00000023959 ENSOJAG00000023952 syt4 (ENSOJAG00000023949) SGCZ (ENSOJAG00000023942) DCTN6 (ENSOJAG00000023939) RBPMS (ENSOJAG00000023935) ENSOJAG00000023932 DMRTA1 (ENSOJAG00000023929) #22 ENSOJAG00000023928 elavl2 (ENSOJAG00000023923) #23 CAAP1 (ENSOJAG00000023918) ENSOJAG00000023915 ENSOJAG00000023853 ADGRL3 (ENSOJAG00000023481) LURAP1L (ENSOJAG00000023101) TYRP1 (ENSOJAG00000023096) ENSOJAG00000023091 PTPRD (ENSOJAG00000017841) USP53 (ENSOJAG00000017053) myoz2a (ENSOJAG00000017040) SYNPO2 (ENSOJAG00000017001) sec24d (ENSOJAG00000014803) KCNIP4 (ENSOJAG00000014582) Indian medaka MODERN SPECIES 19 ENSOMEG00000004689 ENSOMEG00000004727 ENSOMEG00000004749 ENSOMEG00000004761 ENSOMEG00000004772 ENSOMEG00000004796 ENSOMEG00000004825 ENSOMEG00000004842 ENSOMEG00000004862 ENSOMEG00000004901 ENSOMEG00000004934 syt4 (ENSOMEG00000004955) SGCZ (ENSOMEG00000004970) ENSOMEG00000004999 RBPMS (ENSOMEG00000005044) DMRTA1 (ENSOMEG00000005064) #22 ENSOMEG00000005083 ENSOMEG00000005141 elavl2 (ENSOMEG00000005178) #23 CAAP1 (ENSOMEG00000005226) ENSOMEG00000005308 ADGRL3 (ENSOMEG00000005355) MPDZ (ENSOMEG00000005411) LURAP1L (ENSOMEG00000005431) TYRP1 (ENSOMEG00000005449) PTPRD (ENSOMEG00000005568) ENSOMEG00000005608 myoz2a (ENSOMEG00000005628) ENSOMEG00000005638 sec24d (ENSOMEG00000005678) KCNIP4 (ENSOMEG00000005776) Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00940000155586.A ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Pomacentridae ANCESTRAL SPECIES 28 ENSGT00950000182907.a.b.a ENSGT00940000155598.b ENSGT01030000234592.A.a.b.j ENSGT01030000234592.A.a.b.i.a ENSGT00940000155951.b ENSGT00940000155951.a ENSGT00940000166707 ENSGT00940000166038 ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a.f ENSGT00940000154658.a.e ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Pomacentridae_A ANCESTRAL SPECIES 22 ENSGT00940000155598.b.k.a ENSGT01030000234592.A.a.b.j.n ENSGT01030000234592.A.a.b.i.a ENSGT00940000155951.b ENSGT00940000155951.a ENSGT00940000166707 ENSGT00940000166038 ENSGT01090000260059.a.b.b.b.a.d.a.b ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a.f ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Amphiprion ANCESTRAL SPECIES 96 ENSGT00940000155598.b.k.a ENSGT01030000234592.A.a.b.j.n ENSGT01030000234592.A.a.b.i.a ENSGT00940000155951.b ENSGT00940000155951.a ENSGT00940000166707 ENSGT00940000166038 ENSGT01090000260059.a.b.b.b.a.d.a.b ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a.f ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Clown anemonefish MODERN SPECIES 3261 DMRTA1 (ENSAOCG00000002848) #22 ENSAOCG00000002850 Orange clownfish MODERN SPECIES 15 CORO2A (ENSAPEG00000023850) ENSAPEG00000023844 ENSAPEG00000023828 tec (ENSAPEG00000023770) ENSAPEG00000023733 ENSAPEG00000023702 ENSAPEG00000023676 abcg2a (ENSAPEG00000023653) ENSAPEG00000023637 mfsd8 (ENSAPEG00000023620) ENSAPEG00000023603 SGCZ (ENSAPEG00000023566) ENSAPEG00000023550 RBPMS (ENSAPEG00000023543) FABP2 (ENSAPEG00000023534) DMRTA1 (ENSAPEG00000023525) #22 ENSAPEG00000023497 elavl2 (ENSAPEG00000023474) #23 CAAP1 (ENSAPEG00000023464) ENSAPEG00000023386 ENSAPEG00000023340 ENSAPEG00000023327 ENSAPEG00000023314 ADGRL3 (ENSAPEG00000023284) ENSAPEG00000023255 ENSAPEG00000023237 ENSAPEG00000023231 ENSAPEG00000023222 ENSAPEG00000023207 ENSAPEG00000023197 LURAP1L (ENSAPEG00000023192) Spiny chromis DUPLICATION Spiny chromis DUPLICATION Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 3911 DMRTA1 (ENSAPOG00000012081) #22 Spiny chromis MODERN SPECIES 4141 DMRTA1 (ENSAPOG00000018585) #22 Spiny chromis MODERN SPECIES 111 CORO2A (ENSAPOG00000022981) ENSAPOG00000022953 ENSAPOG00000022923 tec (ENSAPOG00000022888) ENSAPOG00000022839 ENSAPOG00000022651 abcg2a (ENSAPOG00000022542) ENSAPOG00000022526 ENSAPOG00000022499 mfsd8 (ENSAPOG00000022463) ENSAPOG00000022403 SGCZ (ENSAPOG00000022386) ENSAPOG00000022362 RBPMS (ENSAPOG00000022304) FABP2 (ENSAPOG00000022284) DMRTA1 (ENSAPOG00000000631) #22 ENSAPOG00000022213 elavl2 (ENSAPOG00000022121) #23 CAAP1 (ENSAPOG00000022103) Spiny chromis MODERN SPECIES 4152 DMRTA1 (ENSAPOG00000018304) #22 Bicolor damselfish MODERN SPECIES 932 ENSSPAG00000005291 tec (ENSSPAG00000005257) ENSSPAG00000005136 ENSSPAG00000005117 ENSSPAG00000005019 ENSSPAG00000004993 abcg2a (ENSSPAG00000004957) ENSSPAG00000004945 mfsd8 (ENSSPAG00000004887) ENSSPAG00000004843 SGCZ (ENSSPAG00000004832) ENSSPAG00000004804 ENSSPAG00000004798 RBPMS (ENSSPAG00000004777) FABP2 (ENSSPAG00000004757) ENSSPAG00000004740 #22 ENSSPAG00000004714 Cichlidae ANCESTRAL SPECIES 20 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Pseudocrenilabrinae_A ANCESTRAL SPECIES 23 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Haplochromini ANCESTRAL SPECIES 31 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Haplochromini_A ANCESTRAL SPECIES 35 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Haplochromini_B ANCESTRAL SPECIES 25 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Zebra mbuna MODERN SPECIES 1106 msantd1 (ENSMZEG00005000288) dtx4a (ENSMZEG00005000295) coro1b (ENSMZEG00005000359) osbp (ENSMZEG00005000405) ACY3 (ENSMZEG00005000421) cldnd1a (ENSMZEG00005000455) ENSMZEG00005000478 ENSMZEG00005000495 ENSMZEG00005000528 mfsd8 (ENSMZEG00005000569) ENSMZEG00005000585 SGCZ (ENSMZEG00005000612) ENSMZEG00005000647 RBPMS (ENSMZEG00005000698) FABP2 (ENSMZEG00005000743) DMRTA1 (ENSMZEG00005000752) #22 ENSMZEG00005000772 elavl2 (ENSMZEG00005000778) #23 CAAP1 (ENSMZEG00005000801) ENSMZEG00005000817 ADGRL3 (ENSMZEG00005001028) MPDZ (ENSMZEG00005001094) LURAP1L (ENSMZEG00005001183) TYRP1 (ENSMZEG00005001187) ENSMZEG00005001208 PTPRD (ENSMZEG00005001243) USP53 (ENSMZEG00005001507) myoz2a (ENSMZEG00005001520) ENSMZEG00005001547 sec24d (ENSMZEG00005001595) KCNIP4 (ENSMZEG00005001667) Eastern happy MODERN SPECIES 15 ENSACLG00000003232 ENSACLG00000003227 ENSACLG00000003215 ENSACLG00000003202 ENSACLG00000003175 ENSACLG00000003158 ENSACLG00000003125 ENSACLG00000003117 ENSACLG00000003069 mfsd8 (ENSACLG00000003047) ENSACLG00000003019 SGCZ (ENSACLG00000003007) ENSACLG00000002952 RBPMS (ENSACLG00000002926) FABP2 (ENSACLG00000002847) DMRTA1 (ENSACLG00000002823) #22 ENSACLG00000002778 elavl2 (ENSACLG00000002715) #23 CAAP1 (ENSACLG00000002613) ENSACLG00000002328 ENSACLG00000002311 ADGRL3 (ENSACLG00000002240) MPDZ (ENSACLG00000002011) LURAP1L (ENSACLG00000001998) TYRP1 (ENSACLG00000001942) PTPRD (ENSACLG00000001550) USP53 (ENSACLG00000001439) myoz2a (ENSACLG00000001413) ENSACLG00000001403 sec24d (ENSACLG00000001362) KCNIP4 (ENSACLG00000001315) P. nyererei MODERN SPECIES 566 ENSPNYG00000001010 ENSPNYG00000001021 mfsd8 (ENSPNYG00000001036) ENSPNYG00000001047 SGCZ (ENSPNYG00000001064) ENSPNYG00000001127 RBPMS (ENSPNYG00000001172) FABP2 (ENSPNYG00000001222) DMRTA1 (ENSPNYG00000001422) #22 ENSPNYG00000001445 elavl2 (ENSPNYG00000001514) #23 CAAP1 (ENSPNYG00000001885) Burton s mouthbrooder MODERN SPECIES 393 ENSHBUG00000005832 ENSHBUG00000005870 RBPMS (ENSHBUG00000005888) FABP2 (ENSHBUG00000005917) DMRTA1 (ENSHBUG00000000928) #22 ENSHBUG00000005942 elavl2 (ENSHBUG00000005968) #23 CAAP1 (ENSHBUG00000005978) ENSHBUG00000006066 ENSHBUG00000006091 ADGRL3 (ENSHBUG00000006141) MPDZ (ENSHBUG00000006186) LURAP1L (ENSHBUG00000001020) TYRP1 (ENSHBUG00000006209) Lyretail cichlid MODERN SPECIES 446 ZFP91 (ENSNBRG00000010534) ENSNBRG00000010513 ENSNBRG00000010487 mfsd8 (ENSNBRG00000010425) SGCZ (ENSNBRG00000010366) ENSNBRG00000010333 FABP2 (ENSNBRG00000010321) DMRTA1 (ENSNBRG00000010312) #22 ENSNBRG00000010299 elavl2 (ENSNBRG00000010284) #23 CAAP1 (ENSNBRG00000010153) ENSNBRG00000010113 ENSNBRG00000010023 ADGRL3 (ENSNBRG00000009989) Midas cichlid MODERN SPECIES 793 ZFP91 (ENSACIG00000011617) ENSACIG00000011601 ENSACIG00000011583 mfsd8 (ENSACIG00000011553) ENSACIG00000011477 SGCZ (ENSACIG00000011434) ENSACIG00000011410 RBPMS (ENSACIG00000011395) FABP2 (ENSACIG00000011389) DMRTA1 (ENSACIG00000011367) #22 ENSACIG00000011339 elavl2 (ENSACIG00000010855) #23 CAAP1 (ENSACIG00000010733) ENSACIG00000010635 ADGRL3 (ENSACIG00000010583) MPDZ (ENSACIG00000010482) LURAP1L (ENSACIG00000010470) TYRP1 (ENSACIG00000010444) PTPRD (ENSACIG00000010385) USP53 (ENSACIG00000010321) myoz2a (ENSACIG00000010197) SYNPO2 (ENSACIG00000010161) sec24d (ENSACIG00000009914) KCNIP4 (ENSACIG00000009882) ADGRA3 (ENSACIG00000009827) Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Eupercaria ANCESTRAL SPECIES 19 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Tetraodontidae ANCESTRAL SPECIES 29 ENSGT00940000164407.a.b ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00390000017010 ENSGT00940000155527.j.a ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00390000015958.d ENSGT00940000157294.d ENSGT00390000008294 Fugu MODERN SPECIES 20 ENSTRUG00000009988 msantd1 (ENSTRUG00000009975) dtx4a (ENSTRUG00000009781) coro1b (ENSTRUG00000009539) osbp (ENSTRUG00000009096) ENSTRUG00000009026 cldnd1a (ENSTRUG00000008926) ENSTRUG00000028527 ENSTRUG00000000063 mfsd8 (ENSTRUG00000000059) ENSTRUG00000000057 SGCZ (ENSTRUG00000027866) DCTN6 (ENSTRUG00000000046) RBPMS (ENSTRUG00000000041) ENSTRUG00000000040 dmrta1 (ENSTRUG00000027628) #22 elavl2 (ENSTRUG00000030581) ##23 elavl2 (ENSTRUG00000007867) ##23 ENSTRUG00000031453 CAAP1 (ENSTRUG00000007809) ADGRL3 (ENSTRUG00000002392) LURAP1L (ENSTRUG00000020323) TYRP1 (ENSTRUG00000012615) PTPRD (ENSTRUG00000008887) ENSTRUG00000033349 ENSTRUG00000031970 USP53 (ENSTRUG00000025974) myoz2a (ENSTRUG00000008669) SYNPO2 (ENSTRUG00000019819) sec24d (ENSTRUG00000008125) KCNIP4 (ENSTRUG00000032857) Tetraodon MODERN SPECIES 26 cul1a (ENSTNIG00000002561) scn5lab (ENSTNIG00000006684) ASPH (ENSTNIG00000006685) ENSTNIG00000006686 riok3 (ENSTNIG00000001855) rmc1 (ENSTNIG00000004963) RREB1 (ENSTNIG00000004962) ENSTNIG00000003769 ENSTNIG00000000641 mfsd8 (ENSTNIG00000003770) ENSTNIG00000001154 ENSTNIG00000001618 ENSTNIG00000003203 ENSTNIG00000003204 sumo1 (ENSTNIG00000003205) DMRTA1 (ENSTNIG00000003206) #22 ENSTNIG00000019442 elavl2 (ENSTNIG00000011312) ##23 CAAP1 (ENSTNIG00000011313) ENSTNIG00000011314 ADGRL3 (ENSTNIG00000011315) MPDZ (ENSTNIG00000011316) LURAP1L (ENSTNIG00000011317) TYRP1 (ENSTNIG00000011318) PTPRD (ENSTNIG00000011319) USP53 (ENSTNIG00000011320) myoz2a (ENSTNIG00000011321) SYNPO2 (ENSTNIG00000011322) sec24d (ENSTNIG00000011323) KCNIP4 (ENSTNIG00000011324) gba3 (ENSTNIG00000002058) Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Eupercaria_incertae_sedis ANCESTRAL SPECIES 19 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 European seabass MODERN SPECIES 16 ENSDLAG00005027994 ENSDLAG00005031774 ENSDLAG00005007179 ENSDLAG00005028077 ENSDLAG00005031862 ENSDLAG00005021021 ENSDLAG00005029964 ENSDLAG00005029452 ENSDLAG00005007130 ENSDLAG00005030123 ENSDLAG00005006708 ENSDLAG00005032432 ENSDLAG00005006622 ENSDLAG00005032693 ENSDLAG00005034801 DMRTA1 (ENSDLAG00005006574) #22 ENSDLAG00005006521 ENSDLAG00005028286 #23 CAAP1 (ENSDLAG00005006023) ENSDLAG00005025425 ENSDLAG00005024755 MPDZ (ENSDLAG00005023845) ENSDLAG00005031040 ENSDLAG00005023772 ENSDLAG00005023769 PTPRD (ENSDLAG00005022790) USP53 (ENSDLAG00005022719) myoz2a (ENSDLAG00005027006) SYNPO2 (ENSDLAG00005022711) sec24d (ENSDLAG00005022522) KCNIP4 (ENSDLAG00005022495) Large yellow croaker MODERN SPECIES 485 ENSLCRG00005004738 msantd1 (ENSLCRG00005004714) dtx4a (ENSLCRG00005004676) coro1b (ENSLCRG00005004626) osbp (ENSLCRG00005004524) cldnd1a (ENSLCRG00005004368) ENSLCRG00005004322 ENSLCRG00005004309 ENSLCRG00005004274 mfsd8 (ENSLCRG00005004205) ENSLCRG00005004162 SGCZ (ENSLCRG00005004148) DCTN6 (ENSLCRG00005004004) RBPMS (ENSLCRG00005003935) FABP2 (ENSLCRG00005003931) DMRTA1 (ENSLCRG00005003925) #22 ENSLCRG00005003892 ENSLCRG00005003835 nlgn2a (ENSLCRG00005003705) tmem256 (ENSLCRG00005003642) tmem102 (ENSLCRG00005003635) fgf11a (ENSLCRG00005003609) ENSLCRG00005003600 chrnb1 (ENSLCRG00005003556) chrnb1l (ENSLCRG00005003467) cldn7a (ENSLCRG00005003412) ENSLCRG00005003410 ponzr3 (ENSLCRG00005003404) ugt5g1 (ENSLCRG00005003399) ENSLCRG00005003392 PTGDR2 (ENSLCRG00005003374) Gilthead seabream MODERN SPECIES 1 ACY3 (ENSSAUG00010015446) cldnd1a (ENSSAUG00010015449) ENSSAUG00010015455 ENSSAUG00010015471 ENSSAUG00010015474 ENSSAUG00010001304 ENSSAUG00010001321 ENSSAUG00010001337 ENSSAUG00010001343 mfsd8 (ENSSAUG00010001388) ENSSAUG00010001789 SGCZ (ENSSAUG00010001811) DCTN6 (ENSSAUG00010001835) RBPMS (ENSSAUG00010001847) FABP2 (ENSSAUG00010001856) DMRTA1 (ENSSAUG00010001862) #22 ENSSAUG00010001874 elavl2 (ENSSAUG00010001898) #23 CAAP1 (ENSSAUG00010002020) ENSSAUG00010002251 ADGRL3 (ENSSAUG00010007883) MPDZ (ENSSAUG00010013816) LURAP1L (ENSSAUG00010018021) TYRP1 (ENSSAUG00010018023) PTPRD (ENSSAUG00010018340) USP53 (ENSSAUG00010026657) myoz2a (ENSSAUG00010026662) SYNPO2 (ENSSAUG00010026663) sec24d (ENSSAUG00010026666) KCNIP4 (ENSSAUG00010026681) ADGRA3 (ENSSAUG00010026684) Perciformes ANCESTRAL SPECIES 19 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Cottioidei ANCESTRAL SPECIES 20 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00980000198603.A ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Lumpfish MODERN SPECIES 9 ENSCLMG00005004933 ENSCLMG00005005608 ENSCLMG00005005646 cldnd1a (ENSCLMG00005006004) ENSCLMG00005006005 ENSCLMG00005006006 ENSCLMG00005006007 ENSCLMG00005006010 ENSCLMG00005006011 mfsd8 (ENSCLMG00005006012) ENSCLMG00005006014 SGCZ (ENSCLMG00005006017) ENSCLMG00005006019 RBPMS (ENSCLMG00005006022) FABP2 (ENSCLMG00005006029) DMRTA1 (ENSCLMG00005006031) #22 ENSCLMG00005006032 ELAVL2 (ENSCLMG00005006033) #23 ENSCLMG00005006110 ENSCLMG00005006114 ADGRL3 (ENSCLMG00005006125) ENSCLMG00005006356 ENSCLMG00005006360 LURAP1L (ENSCLMG00005006362) TYRP1 (ENSCLMG00005006363) PTPRD (ENSCLMG00005006368) ENSCLMG00005006450 USP53 (ENSCLMG00005006452) myoz2a (ENSCLMG00005006455) SYNPO2 (ENSCLMG00005006493) sec24d (ENSCLMG00005006504) Stickleback MODERN SPECIES 7 cldnd1a (ENSGACG00000019430) ENSGACG00000019431 ENSGACG00000019432 ENSGACG00000019433 ZFP91 (ENSGACG00000019434) ENSGACG00000019435 ENSGACG00000019436 ENSGACG00000019438 mfsd8 (ENSGACG00000019443) ENSGACG00000019450 ENSGACG00000019456 SGCZ (ENSGACG00000019458) ENSGACG00000019464 RBPMS (ENSGACG00000019471) FABP2 (ENSGACG00000019474) DMRTA1 (ENSGACG00000019482) #22 ENSGACG00000019483 elavl2 (ENSGACG00000019484) #23 CAAP1 (ENSGACG00000019489) ENSGACG00000019493 ADGRL3 (ENSGACG00000019498) MPDZ (ENSGACG00000019499) LURAP1L (ENSGACG00000019502) TYRP1 (ENSGACG00000019503) PTPRD (ENSGACG00000019528) USP53 (ENSGACG00000019533) myoz2a (ENSGACG00000019535) SYNPO2 (ENSGACG00000019536) sec24d (ENSGACG00000019537) ENSGACG00000019539 KCNIP4 (ENSGACG00000019541) Perciformes_a ANCESTRAL SPECIES 18 ENSGT00940000157122.b.a ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Channel bull blenny MODERN SPECIES 9 ENSCGOG00000009231 SORCS2 (ENSCGOG00000009305) grpel1 (ENSCGOG00000011796) tada2b (ENSCGOG00000011802) ccdc96 (ENSCGOG00000011804) ENSCGOG00000011808 mfsd8 (ENSCGOG00000011812) ENSCGOG00000011883 ENSCGOG00000011891 ENSCGOG00000011893 ENSCGOG00000011894 RBPMS (ENSCGOG00000011895) FABP2 (ENSCGOG00000011898) DMRTA1 (ENSCGOG00000011906) #22 ENSCGOG00000011912 ENSCGOG00000011919 elavl2 (ENSCGOG00000011921) #23 CAAP1 (ENSCGOG00000011927) ENSCGOG00000011945 ADGRL3 (ENSCGOG00000012346) ENSCGOG00000015257 MPDZ (ENSCGOG00000015268) ENSCGOG00000015527 LURAP1L (ENSCGOG00000015528) TYRP1 (ENSCGOG00000015529) PTPRD (ENSCGOG00000015824) ENSCGOG00000022646 USP53 (ENSCGOG00000022651) myoz2a (ENSCGOG00000022655) Pike perch MODERN SPECIES 147 coro1b (ENSSLUG00000005757) osbp (ENSSLUG00000005913) ENSSLUG00000006610 ACY3 (ENSSLUG00000006653) cldnd1a (ENSSLUG00000007039) ENSSLUG00000007048 ENSSLUG00000007060 ENSSLUG00000007066 mfsd8 (ENSSLUG00000007106) ENSSLUG00000007331 ENSSLUG00000007341 SGCZ (ENSSLUG00000007344) DCTN6 (ENSSLUG00000007355) RBPMS (ENSSLUG00000007372) FABP2 (ENSSLUG00000007422) DMRTA1 (ENSSLUG00000007427) #22 ENSSLUG00000007432 Ballan wrasse MODERN SPECIES 255 ENSLBEG00000028110 ENSLBEG00000028105 ENSLBEG00000028101 ENSLBEG00000028096 mfsd8 (ENSLBEG00000028073) ENSLBEG00000028046 SGCZ (ENSLBEG00000028031) DCTN6 (ENSLBEG00000028012) RBPMS (ENSLBEG00000027989) FABP2 (ENSLBEG00000027969) DMRTA1 (ENSLBEG00000027961) #22 ENSLBEG00000027944 elavl2 (ENSLBEG00000027924) #23 CAAP1 (ENSLBEG00000027909) ENSLBEG00000027877 ENSLBEG00000027851 Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Carangaria ANCESTRAL SPECIES 20 ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00990000203806 ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00940000157122.b.a ENSGT00530000067688 ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00940000155527.j.a ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 ENSGT00940000157235 Turbot MODERN SPECIES 11 ENSSMAG00000009774 coro1b (ENSSMAG00000009807) ENSSMAG00000009855 ENSSMAG00000009878 ENSSMAG00000009891 ENSSMAG00000033283 ENSSMAG00000011064 ENSSMAG00000035603 ENSSMAG00000011023 ENSSMAG00000010999 ENSSMAG00000010960 ENSSMAG00000010942 ENSSMAG00000010905 ENSSMAG00000010871 ENSSMAG00000010853 DMRTA1 (ENSSMAG00000010840) #22 ENSSMAG00000010774 ENSSMAG00000010745 #23 CAAP1 (ENSSMAG00000010726) ENSSMAG00000010548 ENSSMAG00000010310 MPDZ (ENSSMAG00000010226) LURAP1L (ENSSMAG00000010216) TYRP1 (ENSSMAG00000010205) PTPRD (ENSSMAG00000010085) ENSSMAG00000010060 myoz2a (ENSSMAG00000010051) SYNPO2 (ENSSMAG00000009992) sec24d (ENSSMAG00000009962) KCNIP4 (ENSSMAG00000009912) ADGRA3 (ENSSMAG00000011652) Tongue sole MODERN SPECIES ENSCSEG00000002622 capgb (ENSCSEG00000002627) POLR2A (ENSCSEG00000002635) ENSCSEG00000002677 NEURL4 (ENSCSEG00000002694) ENSCSEG00000002726 ENSCSEG00000002727 ENSCSEG00000002731 ENSCSEG00000002737 mfsd8 (ENSCSEG00000002741) ENSCSEG00000002755 SGCZ (ENSCSEG00000002769) ENSCSEG00000002774 RBPMS (ENSCSEG00000002777) FABP2 (ENSCSEG00000002784) DMRTA1 (ENSCSEG00000002789) #22 ENSCSEG00000002803 ENSCSEG00000002815 ENSCSEG00000002817 ENSCSEG00000002823 supt7l (ENSCSEG00000002826) ENSCSEG00000002831 ENSCSEG00000002833 mrpl33 (ENSCSEG00000002845) rbks (ENSCSEG00000002838) babam2 (ENSCSEG00000002849) fosl2 (ENSCSEG00000002855) kcns3a (ENSCSEG00000002858) wdr35 (ENSCSEG00000002864) matn3b (ENSCSEG00000002885) ENSCSEG00000002902 Carangaria_A ANCESTRAL SPECIES 26 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b Barramundi perch MODERN SPECIES 430 ENSLCAG00010022843 ENSLCAG00010022841 ENSLCAG00010022838 mfsd8 (ENSLCAG00010022833) ENSLCAG00010022828 SGCZ (ENSLCAG00010022825) DCTN6 (ENSLCAG00010022819) RBPMS (ENSLCAG00010022813) FABP2 (ENSLCAG00010022807) DMRTA1 (ENSLCAG00010022805) #22 ENSLCAG00010022802 Seriola ANCESTRAL SPECIES 66 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00650000093871 ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b Greater amberjack MODERN SPECIES 262 ENSSDUG00000011088 ENSSDUG00000011074 mfsd8 (ENSSDUG00000011010) ENSSDUG00000010976 SGCZ (ENSSDUG00000010950) ENSSDUG00000010926 RBPMS (ENSSDUG00000010894) FABP2 (ENSSDUG00000010879) DMRTA1 (ENSSDUG00000010869) #22 ENSSDUG00000010807 Yellowtail amberjack MODERN SPECIES 3207 dtx4a (ENSSLDG00000012598) coro1b (ENSSLDG00000012652) osbp (ENSSLDG00000012683) ACY3 (ENSSLDG00000012711) cldnd1a (ENSSLDG00000012728) ENSSLDG00000012740 ENSSLDG00000012763 ENSSLDG00000012794 mfsd8 (ENSSLDG00000012810) ENSSLDG00000012846 SGCZ (ENSSLDG00000012868) ENSSLDG00000012895 RBPMS (ENSSLDG00000012916) FABP2 (ENSSLDG00000012938) ENSSLDG00000012977 DMRTA1 (ENSSLDG00000013035) #22 Anabantaria ANCESTRAL SPECIES 19 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Anabantoidei ANCESTRAL SPECIES 24 ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00940000159031 ENSGT00940000156164.b ENSGT00390000001189.b.i ENSGT00390000002596.a ENSGT00940000156393.a.a ENSGT00540000073610.B ENSGT01070000253822.D.b ENSGT00530000063854 ENSGT00940000161036.A.e ENSGT00940000157146.a.a ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000154658.a ENSGT00980000202414 ENSGT00940000155527.j.a ENSGT00980000203174 ENSGT00940000155586.B ENSGT00530000063790.b ENSGT00940000155804.k.a ENSGT00940000153617.B ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b Climbing perch MODERN SPECIES 9 ENSATEG00000028499 ENSATEG00000022633 ENSATEG00000018818 ENSATEG00000018832 ENSATEG00000018803 ENSATEG00000018782 ENSATEG00000018729 ENSATEG00000018746 ENSATEG00000018405 ENSATEG00000018344 ENSATEG00000018302 ENSATEG00000018273 ENSATEG00000018250 ENSATEG00000018184 ENSATEG00000018157 DMRTA1 (ENSATEG00000018104) #22 ENSATEG00000027806 ENSATEG00000018073 #23 CAAP1 (ENSATEG00000018064) ENSATEG00000017971 ENSATEG00000028927 ENSATEG00000017807 MPDZ (ENSATEG00000017540) ENSATEG00000026345 LURAP1L (ENSATEG00000017466) TYRP1 (ENSATEG00000017446) PTPRD (ENSATEG00000017283) USP53 (ENSATEG00000017245) myoz2a (ENSATEG00000017228) SYNPO2 (ENSATEG00000017221) sec24d (ENSATEG00000016860) Siamese fighting fish MODERN SPECIES 10 ENSBSLG00000012259 msantd1 (ENSBSLG00000012264) dtx4a (ENSBSLG00000012268) coro1b (ENSBSLG00000000171) osbp (ENSBSLG00000000321) ACY3 (ENSBSLG00000000424) cldnd1a (ENSBSLG00000000449) ENSBSLG00000000582 ENSBSLG00000000606 mfsd8 (ENSBSLG00000000635) ENSBSLG00000000651 SGCZ (ENSBSLG00000000669) ENSBSLG00000000686 RBPMS (ENSBSLG00000000706) FABP2 (ENSBSLG00000000720) DMRTA1 (ENSBSLG00000000722) #22 ENSBSLG00000000731 elavl2 (ENSBSLG00000000766) #23 CAAP1 (ENSBSLG00000001197) ENSBSLG00000001323 ADGRL3 (ENSBSLG00000001907) ENSBSLG00000002092 MPDZ (ENSBSLG00000002122) LURAP1L (ENSBSLG00000003235) PTPRD (ENSBSLG00000004441) ENSBSLG00000015352 USP53 (ENSBSLG00000015366) myoz2a (ENSBSLG00000015413) SYNPO2 (ENSBSLG00000015420) sec24d (ENSBSLG00000015555) KCNIP4 (ENSBSLG00000017625) Zig-zag eel MODERN SPECIES 9 HGFAC (ENSMAMG00000003958) ENSMAMG00000004013 msantd1 (ENSMAMG00000004077) ENSMAMG00000004087 coro1b (ENSMAMG00000004143) ENSMAMG00000004181 ENSMAMG00000025189 ENSMAMG00000025393 ENSMAMG00000026435 ENSMAMG00000004270 ENSMAMG00000004311 ENSMAMG00000004328 ENSMAMG00000004366 ENSMAMG00000004604 ENSMAMG00000004624 DMRTA1 (ENSMAMG00000004643) #22 ENSMAMG00000004674 ENSMAMG00000004806 #23 ENSMAMG00000004829 CAAP1 (ENSMAMG00000004841) ENSMAMG00000004862 ENSMAMG00000005041 MPDZ (ENSMAMG00000005182) LURAP1L (ENSMAMG00000005271) TYRP1 (ENSMAMG00000005278) PTPRD (ENSMAMG00000005311) USP53 (ENSMAMG00000005390) myoz2a (ENSMAMG00000005400) SYNPO2 (ENSMAMG00000005405) sec24d (ENSMAMG00000005409) KCNIP4 (ENSMAMG00000005426) Tiger tail seahorse MODERN SPECIES 263 ENSHCOG00000005431 CORO2A (ENSHCOG00000000703) ENSHCOG00000005452 ENSHCOG00000000622 ENSHCOG00000005473 mad2l1 (ENSHCOG00000000878) ENSHCOG00000005502 pde5ab (ENSHCOG00000005548) ENSHCOG00000000671 ENSHCOG00000005564 mfsd8 (ENSHCOG00000005735) ENSHCOG00000005755 RBPMS (ENSHCOG00000005774) ENSHCOG00000005785 ENSHCOG00000005903 ENSHCOG00000005917 #22 elavl2 (ENSHCOG00000005961) #23 ENSHCOG00000006029 ADGRL3 (ENSHCOG00000006063) ENSHCOG00000006079 ENSHCOG00000006162 ENSHCOG00000006190 LURAP1L (ENSHCOG00000006193) TYRP1 (ENSHCOG00000006206) ENSHCOG00000006220 Otomorpha ANCESTRAL SPECIES 13 ENSGT01040000240385.B ENSGT00940000155378.c.b ENSGT00940000161707.a.b ENSGT00390000015386.b ENSGT00940000159778.a ENSGT00940000164407.b ENSGT00390000002245 ENSGT00940000157122.b.a ENSGT00530000067688 ENSGT00940000159031 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Clupeiformes ANCESTRAL SPECIES 370 ENSGT00390000017890.b.b ENSGT00940000159617.d ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a Atlantic herring MODERN SPECIES 9 men1 (ENSCHAG00000024973) map4k2 (ENSCHAG00000024900) ENSCHAG00000024874 #12 ENSCHAG00000024869 ENSCHAG00000024867 ENSCHAG00000024863 ufsp1 (ENSCHAG00000024860) ENSCHAG00000024856 epoa (ENSCHAG00000024853) pop7 (ENSCHAG00000024851) dctn1a (ENSCHAG00000024469) ENSCHAG00000024408 ENSCHAG00000024391 FABP2 (ENSCHAG00000024387) ENSCHAG00000024385 DMRTA1 (ENSCHAG00000024382) #22 ENSCHAG00000024369 ELAVL2 (ENSCHAG00000024234) #23 CAAP1 (ENSCHAG00000024225) PTPRD (ENSCHAG00000022128) ENSCHAG00000022072 TYRP1 (ENSCHAG00000022041) LURAP1L (ENSCHAG00000022033) MPDZ (ENSCHAG00000018153) ADGRL3 (ENSCHAG00000016770) ENSCHAG00000012496 ENSCHAG00000012178 syt4 (ENSCHAG00000012167) vbp1 (ENSCHAG00000012118) rab39bb (ENSCHAG00000012110) zgc:162171 (ENSCHAG00000012096) Otophysi ANCESTRAL SPECIES 347 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.a ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b Characiphysae ANCESTRAL SPECIES 58 ENSGT00940000155316 ENSGT00940000155521.b ENSGT00940000164636 ENSGT00940000159796.a.b ENSGT01070000253822.D.b.bb ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00940000155378.c.b ENSGT00940000164430.a.b.a ENSGT00940000159753 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.a ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01060000248862 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a Channel catfish MODERN SPECIES 21 ENSIPUG00000013157 ENSIPUG00000013149 ENSIPUG00000013101 ENSIPUG00000013081 dctn1a (ENSIPUG00000012919) epdl1 (ENSIPUG00000013074) alpk1 (ENSIPUG00000012894) ACY3 (ENSIPUG00000012662) cldnd1a (ENSIPUG00000012525) dctn6 (ENSIPUG00000012563) RBPMS (ENSIPUG00000012459) FABP2 (ENSIPUG00000012439) ENSIPUG00000012426 ENSIPUG00000012414 ENSIPUG00000012405 dmrta1 (ENSIPUG00000012365) #22 elavl2 (ENSIPUG00000012337) #23 ENSIPUG00000012318 CAAP1 (ENSIPUG00000012290) ENSIPUG00000012272 PTPRD (ENSIPUG00000011999) ENSIPUG00000011950 ENSIPUG00000011926 ENSIPUG00000011910 ENSIPUG00000011901 ENSIPUG00000011890 ENSIPUG00000011869 ENSIPUG00000011842 ENSIPUG00000011825 TYRP1 (ENSIPUG00000011768) lurap1l (ENSIPUG00000011753) Characiphysae_b ANCESTRAL SPECIES 148 ENSGT00940000155378.c.b ENSGT00940000164430.a.b.a ENSGT00940000159753 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.a ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00510000047770.c.b ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01060000248862 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a Characoidei ANCESTRAL SPECIES 168 ENSGT00940000155378.c.b ENSGT00940000164430.a.b.a ENSGT00940000159753 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.a ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 #22 ENSGT00940000156823.e #23 ENSGT00390000017010 ENSGT01060000248862 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a Red-bellied piranha MODERN SPECIES 351 ENSPNAG00000008223 dctn1a (ENSPNAG00000008205) ENSPNAG00000008154 ENSPNAG00000008146 ENSPNAG00000008132 cldnd1a (ENSPNAG00000008120) ACY3 (ENSPNAG00000029235) DCTN6 (ENSPNAG00000029171) RBPMS (ENSPNAG00000029160) FABP2 (ENSPNAG00000029151) DMRTA1 (ENSPNAG00000029124) #22 ENSPNAG00000004509 ENSPNAG00000006877 elavl2 (ENSPNAG00000029068) #23 Mexicana tetra MODERN SPECIES 148 ENSAMXG00000036642 ENSAMXG00000024997 ENSAMXG00000010805 ENSAMXG00000041673 epdl1 (ENSAMXG00000042285) ENSAMXG00000039396 cldnd1a (ENSAMXG00000010865) ENSAMXG00000035524 DCTN6 (ENSAMXG00000029107) RBPMS (ENSAMXG00000033491) DMRTA1 (ENSAMXG00000041774) #22 elavl2 (ENSAMXG00000036990) #23 CAAP1 (ENSAMXG00000010921) ENSAMXG00000010930 ENSAMXG00000032212 ENSAMXG00000024998 ADRA1D (ENSAMXG00000040492) CTNNA2 (ENSAMXG00000035308) Electric eel MODERN SPECIES 465 ENSEEEG00000018812 ENSEEEG00000018811 ENSEEEG00000018810 #11 rps6 (ENSEEEG00000018809) ##10 ENSEEEG00000018808 dnaja1 (ENSEEEG00000018772) patl1 (ENSEEEG00000018767) dctn1a (ENSEEEG00000017783) epdl1 (ENSEEEG00000017723) ENSEEEG00000017716 ENSEEEG00000017713 ACY3 (ENSEEEG00000017631) DCTN6 (ENSEEEG00000017621) RBPMS (ENSEEEG00000017619) FABP2 (ENSEEEG00000017585) DMRTA1 (ENSEEEG00000017584) #22 ENSEEEG00000017582 Cyprinoidei ANCESTRAL SPECIES 332 ENSGT00940000160640 #22 ENSGT00940000165556.b ENSGT00390000017010 Cyprininae ANCESTRAL SPECIES 975 ENSGT00390000002596.a ENSGT00940000159617.f ENSGT00940000160640 #22 ENSGT00940000165556.b ENSGT00390000017010 Cyprininae_a ANCESTRAL SPECIES 671 ENSGT00390000002596.b.b ENSGT00390000001189.b.i ENSGT00390000017890.b.a.m ENSGT00940000159617.e ENSGT00940000160640 #22 ENSGT00940000165556.b ENSGT00390000017010 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 2075 DCTN6 (ENSSGRG00000011814) ENSSGRG00000011844 ENSSGRG00000011846 #22 ENSSGRG00000011850 ENSSGRG00000011873 ENSSGRG00000011883 Golden-line barbel MODERN SPECIES 1808 ACY3 (ENSSGRG00000018652) DCTN6 (ENSSGRG00000018651) ENSSGRG00000018649 ENSSGRG00000018648 #22 ENSSGRG00000018647 ENSSGRG00000018645 Common carp reference MODERN SPECIES 6 ENSCCRG00000054829 ENSCCRG00000025562 ENSCCRG00000062885 ENSCCRG00000072529 ENSCCRG00000076715 ENSCCRG00000034136 #22 ENSCCRG00000066174 ENSCCRG00000058882 ENSCCRG00000064299 ENSCCRG00000080890 ENSCCRG00000071433 ENSCCRG00000082013 ENSCCRG00000059978 ENSCCRG00000074501 ENSCCRG00000071019 ENSCCRG00000076808 ENSCCRG00000051417 ENSCCRG00000072925 zgc:92594 (ENSCCRG00000061796) ENSCCRG00000080624 ENSCCRG00000069761 Goldfish MODERN SPECIES 25 camk2d1 (ENSCARG00000005922) mad2l1 (ENSCARG00000005849) ENSCARG00000068853 pde5ab (ENSCARG00000068694) ENSCARG00000068469 RNF166 (ENSCARG00000068444) PIEZO1 (ENSCARG00000068112) aprt (ENSCARG00000068085) CDT1 (ENSCARG00000068072) galns (ENSCARG00000068054) CBFA2T3 (ENSCARG00000068044) ENSCARG00000068038 cldnd1a (ENSCARG00000068030) ENSCARG00000068028 DCTN6 (ENSCARG00000068011) ENSCARG00000067998 #22 ENSCARG00000067992 ENSCARG00000067991 ENSCARG00000067987 ENSCARG00000067980 ENSCARG00000067974 ENSCARG00000067967 ENSCARG00000067964 ENSCARG00000067957 ENSCARG00000067948 ENSCARG00000067943 ENSCARG00000067934 ENSCARG00000067919 ENSCARG00000067916 PTPRD (ENSCARG00000066199) ENSCARG00000066108