Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000159535 #22
Euteleostomi	ANCESTRAL SPECIES	454														ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00940000165300	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26	ENSGT00390000007739
Actinopterygii	ANCESTRAL SPECIES	303										ENSGT00940000161254	ENSGT00940000157462.C	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00940000160333	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a	ENSGT00940000164715
Neopterygii	ANCESTRAL SPECIES	309												ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00940000160333	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a	ENSGT00940000164715
Osteoglossocephalai	ANCESTRAL SPECIES	105	ENSGT00940000167812	ENSGT00940000158477.a.b	ENSGT00950000182959.b.a.b	ENSGT01030000234588.b.b.b.b.a.b.b	ENSGT00940000158477.a.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a.n.b	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a
Clupeocephala	ANCESTRAL SPECIES	145	ENSGT00940000153901.a.b.a	ENSGT00940000177294	ENSGT01030000234990	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b	ENSGT00950000182959.b.a.b	ENSGT00920000149457	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24
Euteleosteomorpha	ANCESTRAL SPECIES	20	ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Acanthomorphata	ANCESTRAL SPECIES	28	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000160004.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Midas cichlid	MODERN SPECIES	684															ENSACIG00000023554 #21	OSBPL5 (ENSACIG00000023561) #22	phlda2 (ENSACIG00000023569) #23	nap1l4a (ENSACIG00000023580) #24	th (ENSACIG00000023618) #25	igf2b (ENSACIG00000023647) #26
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.f	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Haplochromini_B	ANCESTRAL SPECIES	40	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.f	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00530000063825.A.c.f.e	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Zebra mbuna	MODERN SPECIES	1110	th (ENSMZEG00005017439) #25	nap1l4a (ENSMZEG00005017428) #24	phlda2 (ENSMZEG00005017422) #23	SLC15A5 (ENSMZEG00005017416)	ccdc34 (ENSMZEG00005017412)	RAB19 (ENSMZEG00005017407)	hdhd5 (ENSMZEG00005017405)	ccdc77 (ENSMZEG00005017396)	ush1c (ENSMZEG00005017390)	abcc8 (ENSMZEG00005017373)	kcnj11 (ENSMZEG00005017366)	mob2a (ENSMZEG00005017364)	dusp8a (ENSMZEG00005017357)	PTPN5 (ENSMZEG00005017350)	ENSMZEG00005017345 #21	OSBPL5 (ENSMZEG00005017339) #22	endouc (ENSMZEG00005017335)	ENSMZEG00005017325	tmem17 (ENSMZEG00005017323)	agbl2 (ENSMZEG00005017319)	ENSMZEG00005017311	fnbp4 (ENSMZEG00005017308)	ENSMZEG00005017305	ENSMZEG00005017302	cnot2 (ENSMZEG00005017275)	WASHC4 (ENSMZEG00005017251)	SLC41A2 (ENSMZEG00005017242)	etfbkmt (ENSMZEG00005017239)	si:ch73-62b13.1 (ENSMZEG00005017237)	mterf2 (ENSMZEG00005017233)	zgc:153031 (ENSMZEG00005017228)
Eastern happy	MODERN SPECIES	19	agbl2 (ENSACLG00000003920)	ENSACLG00000003907	SLC15A5 (ENSACLG00000003893)	ENSACLG00000003884	RAB19 (ENSACLG00000003864)	hdhd5 (ENSACLG00000003846)	ccdc77 (ENSACLG00000003804)	ush1c (ENSACLG00000003752)	abcc8 (ENSACLG00000003691)	kcnj11 (ENSACLG00000003124)	mob2a (ENSACLG00000003081)	dusp8a (ENSACLG00000003062)	PTPN5 (ENSACLG00000003025)	ENSACLG00000003011 #21	ENSACLG00000002969 #21	OSBPL5 (ENSACLG00000002936) #22	endouc (ENSACLG00000002802)	phlda2 (ENSACLG00000002779) #23	nap1l4a (ENSACLG00000002761) #24	th (ENSACLG00000002667) #25	igf2b (ENSACLG00000002592) #26	mrpl23 (ENSACLG00000002565)	ENSACLG00000002284	CPT1A (ENSACLG00000002222)	ENSACLG00000002172	uevld (ENSACLG00000002158)	spty2d1 (ENSACLG00000002153)	tmem86a (ENSACLG00000002146)	ENSACLG00000002124	B4GALNT4 (ENSACLG00000002102)	ABTB2 (ENSACLG00000001589)
P. nyererei	MODERN SPECIES	373															ENSPNYG00000015726 #21	OSBPL5 (ENSPNYG00000015658) #22	phlda2 (ENSPNYG00000015634) #23	nap1l4a (ENSPNYG00000015622) #24	th (ENSPNYG00000015595) #25	igf2b (ENSPNYG00000015570) #26	mrpl23 (ENSPNYG00000015541)	ENSPNYG00000015527	CPT1A (ENSPNYG00000015485)	ENSPNYG00000015438	uevld (ENSPNYG00000015419)	ENSPNYG00000015410	spty2d1 (ENSPNYG00000015376)	tmem86a (ENSPNYG00000015365)	B4GALNT4 (ENSPNYG00000015331)	ABTB2 (ENSPNYG00000015269)	BRSK2 (ENSPNYG00000015210)
Burton s mouthbrooder	MODERN SPECIES	1229														ENSHBUG00000009706 #21	ENSHBUG00000009685 #21	OSBPL5 (ENSHBUG00000000250) #22	endouc (ENSHBUG00000009625)
Lyretail cichlid	MODERN SPECIES	305											ENSNBRG00000007443	MOB2 (ENSNBRG00000007415)	dusp8a (ENSNBRG00000007404)	PTPN5 (ENSNBRG00000007374)	ENSNBRG00000007349 #21	OSBPL5 (ENSNBRG00000007302) #22	phlda2 (ENSNBRG00000007287) #23	nap1l4a (ENSNBRG00000007252) #24	th (ENSNBRG00000007209) #25	igf2b (ENSNBRG00000007203) #26	mrpl23 (ENSNBRG00000007183)	ENSNBRG00000007151	CPT1A (ENSNBRG00000007101)	ENSNBRG00000007083	ENSNBRG00000007079	spty2d1 (ENSNBRG00000007070)	tmem86a (ENSNBRG00000007062)	B4GALNT4 (ENSNBRG00000006940)	ABTB2 (ENSNBRG00000006897)	BRSK2 (ENSNBRG00000006861)	ldha (ENSNBRG00000006820)
Nile tilapia	MODERN SPECIES	19	ENSONIG00000010479	ENSONIG00000032111	SLC15A5 (ENSONIG00000010484)	ENSONIG00000043128	ENSONIG00000032936	RAB19 (ENSONIG00000038252)	hdhd5 (ENSONIG00000010486)	ccdc77 (ENSONIG00000010489)	ush1c (ENSONIG00000010490)	abcc8 (ENSONIG00000010493)	kcnj11 (ENSONIG00000010513)	mob2a (ENSONIG00000035681)	dusp8a (ENSONIG00000028676)	PTPN5 (ENSONIG00000010519)	ENSONIG00000037111	OSBPL5 (ENSONIG00000009684) #22	ENSONIG00000029488	phlda2 (ENSONIG00000020439) #23	nap1l4a (ENSONIG00000014488) #24	th (ENSONIG00000014492) #25	igf2b (ENSONIG00000039552) #26	mrpl23 (ENSONIG00000033240)	ENSONIG00000014501	CPT1A (ENSONIG00000014502)	ENSONIG00000014519	uevld (ENSONIG00000014522)	spty2d1 (ENSONIG00000014525)	tmem86a (ENSONIG00000038141)	B4GALNT4 (ENSONIG00000014531)	ABTB2 (ENSONIG00000014537)	BRSK2 (ENSONIG00000014540)
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Pomacentridae_A	ANCESTRAL SPECIES	27	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Amphiprion	ANCESTRAL SPECIES	21	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Clown anemonefish	MODERN SPECIES	1085											mob2a (ENSAOCG00000008669)	dusp8a (ENSAOCG00000008629)	PTPN5 (ENSAOCG00000002626)	ENSAOCG00000008553 #21	ENSAOCG00000008506 #21	OSBPL5 (ENSAOCG00000008475) #22
Orange clownfish	MODERN SPECIES	18	ENSAPEG00000011223	ENSAPEG00000011213	SLC15A5 (ENSAPEG00000011174)	ccdc34 (ENSAPEG00000011150)	RAB19 (ENSAPEG00000011135)	hdhd5 (ENSAPEG00000011119)	ccdc77 (ENSAPEG00000011101)	ush1c (ENSAPEG00000011077)	abcc8 (ENSAPEG00000010930)	kcnj11 (ENSAPEG00000010911)	mob2a (ENSAPEG00000010878)	dusp8a (ENSAPEG00000010753)	PTPN5 (ENSAPEG00000010682)	ENSAPEG00000010646 #21	ENSAPEG00000010608 #21	OSBPL5 (ENSAPEG00000010496) #22	phlda2 (ENSAPEG00000010461) #23	nap1l4a (ENSAPEG00000010404) #24	th (ENSAPEG00000010338) #25	igf2b (ENSAPEG00000010328) #26	mrpl23 (ENSAPEG00000010298)	ENSAPEG00000010250	CPT1A (ENSAPEG00000010158)	ENSAPEG00000010086	uevld (ENSAPEG00000009988)	spty2d1 (ENSAPEG00000009961)	tmem86a (ENSAPEG00000009944)	B4GALNT4 (ENSAPEG00000009874)	ABTB2 (ENSAPEG00000009791)	BRSK2 (ENSAPEG00000009703)	ldha (ENSAPEG00000009620)
Spiny chromis	MODERN SPECIES	174											dusp8a (ENSAPOG00000012804)	PTPN5 (ENSAPOG00000012845)	ENSAPOG00000012898	ENSAPOG00000012935 #21	ENSAPOG00000012984 #21	OSBPL5 (ENSAPOG00000013008) #22	phlda2 (ENSAPOG00000013030) #23	nap1l4a (ENSAPOG00000013089) #24	th (ENSAPOG00000013175) #25	igf2b (ENSAPOG00000013186) #26	mrpl23 (ENSAPOG00000013198)	ENSAPOG00000013246	CPT1A (ENSAPOG00000013348)	ENSAPOG00000013421	uevld (ENSAPOG00000013438)	ENSAPOG00000013452	tmem86a (ENSAPOG00000013470)	IGSF22 (ENSAPOG00000013485)
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Aplocheiloidei	ANCESTRAL SPECIES	1	ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Mangrove rivulus	MODERN SPECIES	45	ENSKMAG00000000758	ENSKMAG00000000764	SLC15A5 (ENSKMAG00000000775)	ccdc34 (ENSKMAG00000000788)	RAB19 (ENSKMAG00000000799)	hdhd5 (ENSKMAG00000000812)	ccdc77 (ENSKMAG00000000827)	ush1c (ENSKMAG00000000909)	abcc8 (ENSKMAG00000001028)	kcnj11 (ENSKMAG00000001224)	mob2a (ENSKMAG00000001239)	dusp8a (ENSKMAG00000001272)	PTPN5 (ENSKMAG00000001291)	ENSKMAG00000001301	ENSKMAG00000001319 #21	OSBPL5 (ENSKMAG00000001353) #22	phlda2 (ENSKMAG00000001458) #23	nap1l4a (ENSKMAG00000001485) #24	th (ENSKMAG00000001508) #25	igf2b (ENSKMAG00000001586) #26	mrpl23 (ENSKMAG00000001599)	ENSKMAG00000001630	CPT1A (ENSKMAG00000001650)	ENSKMAG00000001729	ENSKMAG00000001789	spty2d1 (ENSKMAG00000001827)	tmem86a (ENSKMAG00000001833)
Turquoise killifish	MODERN SPECIES	1622	FNBP4 (ENSNFUG00015024371)	agbl2 (ENSNFUG00015024365)	TMEM17 (ENSNFUG00015024356)	ENSNFUG00015024355	SLC15A5 (ENSNFUG00015024351)	ENSNFUG00015024347	RAB19 (ENSNFUG00015024345)	CECR5 (ENSNFUG00015024340)	ccdc77 (ENSNFUG00015024335)	USH1C (ENSNFUG00015024292)	abcc8 (ENSNFUG00015019713)	KCNJ11 (ENSNFUG00015019400)	MOB2A (ENSNFUG00015019393)	DUSP8A (ENSNFUG00015019392)	PTPN5 (ENSNFUG00015019379)	OSBPL5 (ENSNFUG00015019039) #22	PHLDA2 (ENSNFUG00015019031) #23	NAP1L4A (ENSNFUG00015018920) #24	TH (ENSNFUG00015018175) #25	IGF2B (ENSNFUG00015018144) #26	ENSNFUG00015018140	mrpl23 (ENSNFUG00015018133)	Nfu_g_1_008143 (ENSNFUG00015018130)	CPT1A (ENSNFUG00015018102)	ENSNFUG00015018089	UEVLD (ENSNFUG00015018066)	SPTY2D1 (ENSNFUG00015018059)	TMEM86A (ENSNFUG00015018051)	ENSNFUG00015018046	SCARA3 (ENSNFUG00015018041)	ENSNFUG00015018039
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
NAME_4	ANCESTRAL SPECIES	51	ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Mummichog	MODERN SPECIES	529								ccdc77 (ENSFHEG00000011384)	ush1c (ENSFHEG00000011358)	abcc8 (ENSFHEG00000011313)	kcnj11 (ENSFHEG00000011225)	mob2a (ENSFHEG00000011213)	dusp8a (ENSFHEG00000011189)	PTPN5 (ENSFHEG00000011184)	ENSFHEG00000011144 #21	OSBPL5 (ENSFHEG00000011128) #22	phlda2 (ENSFHEG00000011079) #23	nap1l4a (ENSFHEG00000011047) #24	th (ENSFHEG00000011030) #25	igf2b (ENSFHEG00000010989) #26	mrpl23 (ENSFHEG00000010978)	ENSFHEG00000010957	CPT1A (ENSFHEG00000010907)	ENSFHEG00000010774	ENSFHEG00000010693	spty2d1 (ENSFHEG00000010640)	tmem86a (ENSFHEG00000010634)	B4GALNT4 (ENSFHEG00000010606)	ABTB2 (ENSFHEG00000010362)	BRSK2 (ENSFHEG00000010260)	ldha (ENSFHEG00000010165)
Sheepshead minnow	MODERN SPECIES	366	ENSCVAG00000003159	SLC15A5 (ENSCVAG00000003150)	ccdc34 (ENSCVAG00000003134)	RAB19 (ENSCVAG00000003126)	hdhd5 (ENSCVAG00000003109)	ccdc77 (ENSCVAG00000003101)	ush1c (ENSCVAG00000003086)	abcc8 (ENSCVAG00000003058)	kcnj11 (ENSCVAG00000003013)	mob2a (ENSCVAG00000003005)	dusp8a (ENSCVAG00000000661)	ENSCVAG00000002985	PTPN5 (ENSCVAG00000002976)	ENSCVAG00000002967 #21	ENSCVAG00000002951 #21	OSBPL5 (ENSCVAG00000002927) #22	phlda2 (ENSCVAG00000002872) #23	nap1l4a (ENSCVAG00000002863) #24	th (ENSCVAG00000002841) #25	igf2b (ENSCVAG00000002826) #26	mrpl23 (ENSCVAG00000002822)
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Poecilia	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
NAME_6	ANCESTRAL SPECIES	70	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Amazon molly	MODERN SPECIES	376	ENSPFOG00000012628	SLC15A5 (ENSPFOG00000012631)	ccdc34 (ENSPFOG00000012706)	RAB19 (ENSPFOG00000012720)	hdhd5 (ENSPFOG00000012734)	ccdc77 (ENSPFOG00000012790)	ush1c (ENSPFOG00000012885)	abcc8 (ENSPFOG00000013039)	kcnj11 (ENSPFOG00000020136)	ENSPFOG00000020137	mob2a (ENSPFOG00000013609)	dusp8a (ENSPFOG00000013641)	PTPN5 (ENSPFOG00000013661)	ENSPFOG00000013743 #21	ENSPFOG00000013844 #21	OSBPL5 (ENSPFOG00000013862) #22	phlda2 (ENSPFOG00000020139) #23	nap1l4a (ENSPFOG00000013985) #24	th (ENSPFOG00000014072) #25	igf2b (ENSPFOG00000014112) #26	mrpl23 (ENSPFOG00000014159)	ENSPFOG00000014178	CPT1A (ENSPFOG00000014240)	ENSPFOG00000014459	ENSPFOG00000014535
Sailfin molly	MODERN SPECIES	1113															ENSPLAG00000003189 #21	OSBPL5 (ENSPLAG00000003177) #22	phlda2 (ENSPLAG00000003162) #23	nap1l4b (ENSPLAG00000003148)	th (ENSPLAG00000003125) #25	igf2b (ENSPLAG00000003099) #26
Guppy	MODERN SPECIES	458	tmem17 (ENSPREG00000020736)	ENSPREG00000020692	ENSPREG00000020664	SLC15A5 (ENSPREG00000020633)	ccdc34 (ENSPREG00000020621)	RAB19 (ENSPREG00000020603)	hdhd5 (ENSPREG00000020593)	ccdc77 (ENSPREG00000020567)	ush1c (ENSPREG00000020536)	abcc8 (ENSPREG00000020311)	kcnj11 (ENSPREG00000020250)	mob2a (ENSPREG00000020228)	dusp8a (ENSPREG00000020211)	PTPN5 (ENSPREG00000020172)	ENSPREG00000020153 #21	OSBPL5 (ENSPREG00000020135) #22	phlda2 (ENSPREG00000020116) #23	nap1l4a (ENSPREG00000020100) #24	th (ENSPREG00000020052) #25	igf2 (ENSPREG00000019975) #26	mrpl23 (ENSPREG00000019951)	ENSPREG00000019917	CPT1A (ENSPREG00000019861)	ENSPREG00000019811	ENSPREG00000019784	spty2d1 (ENSPREG00000019769)	tmem86a (ENSPREG00000019727)	B4GALNT4 (ENSPREG00000019698)	ABTB2 (ENSPREG00000019630)	BRSK2 (ENSPREG00000019521)	ldha (ENSPREG00000019471)
Platyfish	MODERN SPECIES	11	RAB19 (ENSXMAG00000019264)	hdhd5 (ENSXMAG00000019263)	ccdc77 (ENSXMAG00000019260)	ush1c (ENSXMAG00000019258)	abcc8 (ENSXMAG00000019243)	kcnj11 (ENSXMAG00000026465)	mob2a (ENSXMAG00000022623)	dusp8a (ENSXMAG00000029104)	PTPN5 (ENSXMAG00000027813)	ENSXMAG00000025057	ENSXMAG00000021724	ENSXMAG00000022138	ENSXMAG00000023154	ENSXMAG00000024810	ENSXMAG00000018596 #21	OSBPL5 (ENSXMAG00000018609) #22	phlda2 (ENSXMAG00000019767) #23	nap1l4b (ENSXMAG00000022270)	th (ENSXMAG00000025487) #25	igf2b (ENSXMAG00000026239) #26	mrpl23 (ENSXMAG00000015496)	ENSXMAG00000015493	CPT1A (ENSXMAG00000015395)	ENSXMAG00000026683	ENSXMAG00000024578	spty2d1 (ENSXMAG00000015340)	tmem86a (ENSXMAG00000015336)	B4GALNT4 (ENSXMAG00000028406)	ABTB2 (ENSXMAG00000015256)	BRSK2 (ENSXMAG00000015186)	ldha (ENSXMAG00000022304)
Oryzias	ANCESTRAL SPECIES	27	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626.rb	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT01000000215262	ENSGT00950000183002.A	ENSGT00940000156626.rb	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Javanese ricefish	MODERN SPECIES	20	fnbp4 (ENSOJAG00000001059)	agbl2 (ENSOJAG00000001047)	tmem17 (ENSOJAG00000001036)	SLC15A5 (ENSOJAG00000001028)	ccdc34 (ENSOJAG00000001020)	RAB19 (ENSOJAG00000001010)	hdhd5 (ENSOJAG00000001004)	ccdc77 (ENSOJAG00000000995)	ENSOJAG00000000983	ush1c (ENSOJAG00000000904)	kcnj11 (ENSOJAG00000000839)	mob2a (ENSOJAG00000000830)	dusp8a (ENSOJAG00000000815)	PTPN5 (ENSOJAG00000000807)	ENSOJAG00000000785 #21	OSBPL5 (ENSOJAG00000000563) #22	phlda2 (ENSOJAG00000000506) #23	nap1l4b (ENSOJAG00000000488)	th (ENSOJAG00000000427) #25	igf2b (ENSOJAG00000000406) #26	mrpl23 (ENSOJAG00000000400)	ENSOJAG00000000379	CPT1A (ENSOJAG00000000267)	ENSOJAG00000000160	ENSOJAG00000000124	spty2d1 (ENSOJAG00000000097)	tmem86a (ENSOJAG00000018198)	ENSOJAG00000018182	ENSOJAG00000018162	ENSOJAG00000018148	B4GALNT4 (ENSOJAG00000018050)
Indian medaka	MODERN SPECIES	15	RAB19 (ENSOMEG00000023402)	hdhd5 (ENSOMEG00000023397)	ccdc77 (ENSOMEG00000023414)	ENSOMEG00000023422	ush1c (ENSOMEG00000023460)	abcc8 (ENSOMEG00000023549)	kcnj11 (ENSOMEG00000023565)	mob2a (ENSOMEG00000023573)	dusp8a (ENSOMEG00000023588)	PTPN5 (ENSOMEG00000023600)	ENSOMEG00000023664 #21	ENSOMEG00000023894	ENSOMEG00000023893	ENSOMEG00000023891	ENSOMEG00000023890	OSBPL5 (ENSOMEG00000023888) #22	phlda2 (ENSOMEG00000023886) #23	nap1l4b (ENSOMEG00000023882)	th (ENSOMEG00000023878) #25	igf2b (ENSOMEG00000023877) #26
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626.rb	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157462.C.d	ENSGT00940000153201	ENSGT00940000153903.a.b.a	ENSGT00940000153903.a.b.b	ENSGT00940000155653.b
Japanese Medaka HdrR	MODERN SPECIES	20	abcc8 (ENSORLG00000016552)	ENSORLG00000028767	mob2a (ENSORLG00000025111)	dusp8a (ENSORLG00000023597)	ENSORLG00000021785	ENSORLG00000027067	ENSORLG00000029761	ENSORLG00000028466	ENSORLG00000026283	ENSORLG00000025658	ENSORLG00000022493	ENSORLG00000029831	ENSORLG00000027452 #21	ENSORLG00000025467	ENSORLG00000023418	OSBPL5 (ENSORLG00000015578) #22	ENSORLG00000026646	phlda2 (ENSORLG00000018983) #23	nap1l4b (ENSORLG00000018973)	ENSORLG00000022094	th (ENSORLG00000018964) #25	igf2b (ENSORLG00000026863) #26	ENSORLG00000029075	ENSORLG00000028415	ENSORLG00000024914	ENSORLG00000024400	ENSORLG00000022958	ENSORLG00000028425	mrpl23 (ENSORLG00000025383)	ENSORLG00000029604	CPT1A (ENSORLG00000030183)
Chinese medaka	MODERN SPECIES	1403																ENSOSIG00000001277 #22
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Eupercaria	ANCESTRAL SPECIES	6	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Tetraodontidae	ANCESTRAL SPECIES	11	ENSGT00390000003450	ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b.b
Fugu	MODERN SPECIES	21	ENSTRUG00000026408	bscl2 (ENSTRUG00000003547)	fnbp4 (ENSTRUG00000003562)	agbl2 (ENSTRUG00000004266)	tmem17 (ENSTRUG00000023645)	SLC15A5 (ENSTRUG00000004768)	ENSTRUG00000032928	RAB19 (ENSTRUG00000005058)	hdhd5 (ENSTRUG00000005290)	ccdc77 (ENSTRUG00000005468)	kcnj11 (ENSTRUG00000007184)	mob2 (ENSTRUG00000032638)	dusp8a (ENSTRUG00000007284)	PTPN5 (ENSTRUG00000007518)	ENSTRUG00000007719 #21	OSBPL5 (ENSTRUG00000008311) #22	phlda2 (ENSTRUG00000008836) #23	ENSTRUG00000008856 #24	th (ENSTRUG00000009267) #25	IGF2 (ENSTRUG00000030443) #26	mrpl23 (ENSTRUG00000009637)	CPT1A (ENSTRUG00000009681)	ENSTRUG00000009911	ENSTRUG00000009935	spty2d1 (ENSTRUG00000010064)	tmem86a (ENSTRUG00000010152)	B4GALNT4 (ENSTRUG00000010186)	ABTB2 (ENSTRUG00000010317)	BRSK2 (ENSTRUG00000010512)	ldha (ENSTRUG00000010800)	tsg101a (ENSTRUG00000010968)
Tetraodon	MODERN SPECIES	4	bscl2 (ENSTNIG00000008352)	fnbp4 (ENSTNIG00000008351)	agbl2 (ENSTNIG00000008350)	tmem17 (ENSTNIG00000001219)	SLC15A5 (ENSTNIG00000008349)	RAB19 (ENSTNIG00000006650)	hdhd5 (ENSTNIG00000006649)	ccdc77 (ENSTNIG00000006648)	ush1c (ENSTNIG00000006647)	abcc8 (ENSTNIG00000006646)	kcnj11 (ENSTNIG00000006645)	mob2a (ENSTNIG00000006644)	dusp8a (ENSTNIG00000006726)	PTPN5 (ENSTNIG00000019775)	ENSTNIG00000010468 #21	OSBPL5 (ENSTNIG00000010467) #22	phlda2 (ENSTNIG00000001230) #23	nap1l4a (ENSTNIG00000010466) #24	th (ENSTNIG00000010465) #25	igf2b (ENSTNIG00000010464) #26	mrpl23 (ENSTNIG00000010463)	ENSTNIG00000010462	CPT1A (ENSTNIG00000010461)	ENSTNIG00000010460	uevld (ENSTNIG00000010459)	spty2d1 (ENSTNIG00000010458)	tmem86a (ENSTNIG00000010457)	ENSTNIG00000010456	ENSTNIG00000010455	B4GALNT4 (ENSTNIG00000010454)	ENSTNIG00000010453
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Ballan wrasse	MODERN SPECIES	6	ENSLBEG00000003739	SLC15A5 (ENSLBEG00000003676)	rabl2 (ENSLBEG00000003644)	ccdc34 (ENSLBEG00000003624)	RAB19 (ENSLBEG00000003589)	hdhd5 (ENSLBEG00000003565)	ccdc77 (ENSLBEG00000003536)	ush1c (ENSLBEG00000003367)	abcc8 (ENSLBEG00000003141)	kcnj11 (ENSLBEG00000003085)	mob2a (ENSLBEG00000003030)	dusp8a (ENSLBEG00000002969)	PTPN5 (ENSLBEG00000002935)	ENSLBEG00000002906	ENSLBEG00000002868 #21	OSBPL5 (ENSLBEG00000002829) #22	phlda2 (ENSLBEG00000002794) #23	nap1l4a (ENSLBEG00000002740) #24	th (ENSLBEG00000002647) #25	igf2b (ENSLBEG00000002605) #26	mrpl23 (ENSLBEG00000002580)	ENSLBEG00000002536	CPT1A (ENSLBEG00000002446)	ENSLBEG00000002275	ENSLBEG00000002243	spty2d1 (ENSLBEG00000002227)	tmem86a (ENSLBEG00000002214)	B4GALNT4 (ENSLBEG00000002186)	ABTB2 (ENSLBEG00000002138)	BRSK2 (ENSLBEG00000002070)	ldha (ENSLBEG00000002015)
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
European seabass	MODERN SPECIES	19	agbl2 (ENSDLAG00005027255)	tmem17 (ENSDLAG00005001361)	ENSDLAG00005001385	ENSDLAG00005001392	ccdc34 (ENSDLAG00005028597)	ENSDLAG00005033785	hdhd5 (ENSDLAG00005001612)	ENSDLAG00005001627	ush1c (ENSDLAG00005001656)	abcc8 (ENSDLAG00005001823)	kcnj11 (ENSDLAG00005002099)	mob2a (ENSDLAG00005028153)	dusp8a (ENSDLAG00005026479)	ENSDLAG00005002143	ENSDLAG00005002182 #21	ENSDLAG00005002240 #22	ENSDLAG00005034234 #23	nap1l4a (ENSDLAG00005005001) #24	th (ENSDLAG00005005156) #25	igf2b (ENSDLAG00005035050) #26	mrpl23 (ENSDLAG00005031328)	ENSDLAG00005006747	ENSDLAG00005006785	ENSDLAG00005028220	uevld (ENSDLAG00005008034)	spty2d1 (ENSDLAG00005008073)	tmem86a (ENSDLAG00005030964)	IGSF22 (ENSDLAG00005031376)	ENSDLAG00005008104	ENSDLAG00005008300	ENSDLAG00005008477
Large yellow croaker	MODERN SPECIES	492	agbl2 (ENSLCRG00005015720)	tmem17 (ENSLCRG00005015721)	ENSLCRG00005015723	ENSLCRG00005015724	SLC15A5 (ENSLCRG00005015726)	ENSLCRG00005015727	RAB19 (ENSLCRG00005015729)	ccdc77 (ENSLCRG00005015731)	ush1c (ENSLCRG00005015736)	abcc8 (ENSLCRG00005015744)	kcnj11 (ENSLCRG00005016069)	mob2a (ENSLCRG00005016071)	dusp8a (ENSLCRG00005016072)	PTPN5 (ENSLCRG00005016073)	ENSLCRG00005016099 #21	OSBPL5 (ENSLCRG00005016106) #22	phlda2 (ENSLCRG00005017074) #23	nap1l4a (ENSLCRG00005017075) #24	th (ENSLCRG00005017076) #25	igf2b (ENSLCRG00005017105) #26	mrpl23 (ENSLCRG00005017111)	ENSLCRG00005017120	CPT1A (ENSLCRG00005017126)	ENSLCRG00005017473	uevld (ENSLCRG00005017478)	spty2d1 (ENSLCRG00005017484)	tmem86a (ENSLCRG00005017488)	IGSF22 (ENSLCRG00005017490)	B4GALNT4 (ENSLCRG00005017498)	ABTB2 (ENSLCRG00005017730)	BRSK2 (ENSLCRG00005018116)
Gilthead seabream	MODERN SPECIES	22	ENSSAUG00010003182	ENSSAUG00010003200	ENSSAUG00010003209	SLC15A5 (ENSSAUG00010003212)	ccdc34 (ENSSAUG00010003216)	RAB19 (ENSSAUG00010003220)	hdhd5 (ENSSAUG00010003224)	ccdc77 (ENSSAUG00010003229)	ush1c (ENSSAUG00010003237)	abcc8 (ENSSAUG00010003560)	kcnj11 (ENSSAUG00010018638)	mob2a (ENSSAUG00010018640)	dusp8a (ENSSAUG00010018645)	PTPN5 (ENSSAUG00010018790)	ENSSAUG00010018945 #21	OSBPL5 (ENSSAUG00010019002) #22	phlda2 (ENSSAUG00010020886) #23	nap1l4a (ENSSAUG00010020888) #24	th (ENSSAUG00010020896) #25	igf2b (ENSSAUG00010020999) #26	mrpl23 (ENSSAUG00010021001)	ENSSAUG00010021003	CPT1A (ENSSAUG00010021025)	ENSSAUG00010022294	ENSSAUG00010022307	spty2d1 (ENSSAUG00010022355)	tmem86a (ENSSAUG00010022356)	IGSF22 (ENSSAUG00010022360)	B4GALNT4 (ENSSAUG00010022368)	ABTB2 (ENSSAUG00010022380)	BRSK2 (ENSSAUG00010022402)
Perciformes	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Stickleback	MODERN SPECIES	14	SLC15A5 (ENSGACG00000010960)	ccdc34 (ENSGACG00000010963)	RAB19 (ENSGACG00000010965)	hdhd5 (ENSGACG00000010978)	ccdc77 (ENSGACG00000010988)	ush1c (ENSGACG00000011004)	abcc8 (ENSGACG00000011021)	ENSGACG00000011039	kcnj11 (ENSGACG00000011042)	mob2a (ENSGACG00000011046)	dusp8a (ENSGACG00000011050)	PTPN5 (ENSGACG00000011053)	ENSGACG00000011062 #21	ENSGACG00000011075	ENSGACG00000011077	OSBPL5 (ENSGACG00000011081) #22	nap1l4b (ENSGACG00000011095)	th (ENSGACG00000011104) #25	igf2b (ENSGACG00000011125) #26	mrpl23 (ENSGACG00000011130)	ENSGACG00000011138	CPT1A (ENSGACG00000011141)	ENSGACG00000011173	ENSGACG00000011175	tmem17 (ENSGACG00000011177)	ENSGACG00000011179	ENSGACG00000011188	spty2d1 (ENSGACG00000011238)	tmem86a (ENSGACG00000011243)	ENSGACG00000011246	ENSGACG00000011247
Lumpfish	MODERN SPECIES	21	agbl2 (ENSCLMG00005002949)	tmem17 (ENSCLMG00005002919)	ENSCLMG00005002903	SLC15A5 (ENSCLMG00005002854)	ccdc34 (ENSCLMG00005023098)	RAB19 (ENSCLMG00005023097)	hdhd5 (ENSCLMG00005023096)	ccdc77 (ENSCLMG00005023095)	ush1c (ENSCLMG00005023093)	abcc8 (ENSCLMG00005023091)	kcnj11 (ENSCLMG00005023090)	mob2a (ENSCLMG00005023089)	dusp8a (ENSCLMG00005023088)	PTPN5 (ENSCLMG00005023087)	ENSCLMG00005023085 #21	OSBPL5 (ENSCLMG00005023063) #22	phlda2 (ENSCLMG00005023053) #23	nap1l4a (ENSCLMG00005023050) #24	th (ENSCLMG00005023045) #25	igf2b (ENSCLMG00005023042) #26	mrpl23 (ENSCLMG00005023040)	ENSCLMG00005023038	CPT1A (ENSCLMG00005023013)	ENSCLMG00005022989	uevld (ENSCLMG00005022987)	spty2d1 (ENSCLMG00005022985)	tmem86a (ENSCLMG00005022982)	B4GALNT4 (ENSCLMG00005022977)	ABTB2 (ENSCLMG00005022973)	BRSK2 (ENSCLMG00005022972)	ldha (ENSCLMG00005022968)
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Pike perch	MODERN SPECIES	6	ENSSLUG00000001621	ENSSLUG00000001610	SLC15A5 (ENSSLUG00000001593)	ccdc34 (ENSSLUG00000001581)	RAB19 (ENSSLUG00000001564)	hdhd5 (ENSSLUG00000001551)	ccdc77 (ENSSLUG00000001544)	ush1c (ENSSLUG00000001535)	ENSSLUG00000001524	abcc8 (ENSSLUG00000001314)	kcnj11 (ENSSLUG00000001271)	mob2a (ENSSLUG00000001266)	dusp8a (ENSSLUG00000001263)	PTPN5 (ENSSLUG00000001233)	ENSSLUG00000001229 #21	OSBPL5 (ENSSLUG00000000730) #22	phlda2 (ENSSLUG00000000550) #23	nap1l4a (ENSSLUG00000000520) #24	th (ENSSLUG00000000502) #25	igf2b (ENSSLUG00000000490) #26	ENSSLUG00000000486	mrpl23 (ENSSLUG00000000483)	ENSSLUG00000000475	CPT1A (ENSSLUG00000000252)	ENSSLUG00000000127	uevld (ENSSLUG00000000121)	spty2d1 (ENSSLUG00000000115)	tmem86a (ENSSLUG00000000106)	ABTB2 (ENSSLUG00000000096)	BRSK2 (ENSSLUG00000024148)	ldha (ENSSLUG00000024139)
Channel bull blenny	MODERN SPECIES	20	ENSCGOG00000004580	ENSCGOG00000004582	SLC15A5 (ENSCGOG00000004587)	ccdc34 (ENSCGOG00000004590)	RAB19 (ENSCGOG00000004592)	hdhd5 (ENSCGOG00000004594)	ccdc77 (ENSCGOG00000004595)	ndufa9a (ENSCGOG00000004601)	ush1c (ENSCGOG00000004613)	abcc8 (ENSCGOG00000004820)	kcnj11 (ENSCGOG00000009734)	mob2a (ENSCGOG00000009737)	dusp8a (ENSCGOG00000009760)	PTPN5 (ENSCGOG00000009773)	ENSCGOG00000009864 #21	OSBPL5 (ENSCGOG00000009917) #22	phlda2 (ENSCGOG00000011184) #23	nap1l4a (ENSCGOG00000011186) #24	th (ENSCGOG00000011200) #25	igf2b (ENSCGOG00000011317) #26	mrpl23 (ENSCGOG00000011406)	ENSCGOG00000011412	CPT1A (ENSCGOG00000011521)	ENSCGOG00000017540	uevld (ENSCGOG00000017561)	spty2d1 (ENSCGOG00000017592)	tmem86a (ENSCGOG00000017595)	B4GALNT4 (ENSCGOG00000017602)	ABTB2 (ENSCGOG00000017640)	BRSK2 (ENSCGOG00000017777)	ldha (ENSCGOG00000018548)
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Climbing perch	MODERN SPECIES	19	tmem17 (ENSATEG00000018865)	ENSATEG00000018870	ENSATEG00000018877	ENSATEG00000018891	ccdc34 (ENSATEG00000018913)	RAB19 (ENSATEG00000027013)	hdhd5 (ENSATEG00000018947)	ENSATEG00000018956	ush1c (ENSATEG00000018971)	abcc8 (ENSATEG00000018989)	kcnj11 (ENSATEG00000026954)	mob2a (ENSATEG00000019107)	dusp8a (ENSATEG00000019131)	ENSATEG00000019146	ENSATEG00000019158 #21	ENSATEG00000019190 #22	ENSATEG00000019210 #23	nap1l4a (ENSATEG00000019230) #24	th (ENSATEG00000019262) #25	igf2b (ENSATEG00000027726) #26	mrpl23 (ENSATEG00000019314)	ENSATEG00000019339	ENSATEG00000019367	ENSATEG00000019460	uevld (ENSATEG00000019496)	spty2d1 (ENSATEG00000019561)	tmem86a (ENSATEG00000027114)	ENSATEG00000019658	ENSATEG00000019804	ENSATEG00000019882	ldha (ENSATEG00000019929)
Siamese fighting fish	MODERN SPECIES	17	tmem17 (ENSBSLG00000008372)	ENSBSLG00000008359	ENSBSLG00000008338	SLC15A5 (ENSBSLG00000008288)	ccdc34 (ENSBSLG00000012571)	RAB19 (ENSBSLG00000012549)	hdhd5 (ENSBSLG00000012544)	ccdc77 (ENSBSLG00000012533)	ush1c (ENSBSLG00000012313)	abcc8 (ENSBSLG00000008173)	kcnj11 (ENSBSLG00000008028)	mob2a (ENSBSLG00000007969)	dusp8a (ENSBSLG00000007949)	PTPN5 (ENSBSLG00000007806)	ENSBSLG00000007665 #21	OSBPL5 (ENSBSLG00000006847) #22	phlda2 (ENSBSLG00000006167) #23	nap1l4a (ENSBSLG00000006153) #24	th (ENSBSLG00000005632) #25	igf2b (ENSBSLG00000004911) #26	mrpl23 (ENSBSLG00000004796)	ENSBSLG00000004747	CPT1A (ENSBSLG00000004304)	ENSBSLG00000004281	uevld (ENSBSLG00000004240)	ENSBSLG00000004232	tmem86a (ENSBSLG00000004225)	B4GALNT4 (ENSBSLG00000004164)	ABTB2 (ENSBSLG00000004053)	BRSK2 (ENSBSLG00000003957)	ldha (ENSBSLG00000003863)
Zig-zag eel	MODERN SPECIES	20	agbl2 (ENSMAMG00000002743)	tmem17 (ENSMAMG00000028184)	ENSMAMG00000026887	ENSMAMG00000002792	ccdc34 (ENSMAMG00000002837)	ENSMAMG00000025169	hdhd5 (ENSMAMG00000002860)	ENSMAMG00000002879	ush1c (ENSMAMG00000002896)	abcc8 (ENSMAMG00000002960)	kcnj11 (ENSMAMG00000003175)	mob2a (ENSMAMG00000025316)	dusp8a (ENSMAMG00000003190)	ENSMAMG00000003206	ENSMAMG00000003276 #21	ENSMAMG00000003506 #22	ENSMAMG00000003512 #23	nap1l4a (ENSMAMG00000003526) #24	th (ENSMAMG00000003562) #25	igf2b (ENSMAMG00000025980) #26	mrpl23 (ENSMAMG00000003609)	ENSMAMG00000003639	ENSMAMG00000003668	ENSMAMG00000003781	uevld (ENSMAMG00000003864)	spty2d1 (ENSMAMG00000003996)	tmem86a (ENSMAMG00000004015)	ENSMAMG00000004036	ENSMAMG00000004112	ENSMAMG00000004222	ldha (ENSMAMG00000004268)
Carangaria	ANCESTRAL SPECIES	6	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a.d	ENSGT00940000165530.b
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a.d	ENSGT00940000157462.C.c.b
Seriola	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00990000204369	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a.d	ENSGT00940000157462.C.c.b
Yellowtail amberjack	MODERN SPECIES	2945	tmem17 (ENSSLDG00000011093)	ENSSLDG00000011107	SLC15A5 (ENSSLDG00000011120)	ENSSLDG00000011137	RAB19 (ENSSLDG00000011167)	hdhd5 (ENSSLDG00000011194)	ccdc77 (ENSSLDG00000011232)	ush1c (ENSSLDG00000011287)	abcc8 (ENSSLDG00000011425)	kcnj11 (ENSSLDG00000011621)	mob2a (ENSSLDG00000011651)	dusp8a (ENSSLDG00000011695)	ENSSLDG00000011713	ENSSLDG00000011750 #21	ENSSLDG00000011839 #21	OSBPL5 (ENSSLDG00000011869) #22	phlda2 (ENSSLDG00000011903) #23	nap1l4a (ENSSLDG00000011919) #24	th (ENSSLDG00000011976) #25	igf2b (ENSSLDG00000012038) #26	mrpl23 (ENSSLDG00000012055)	ENSSLDG00000012078	CPT1A (ENSSLDG00000012099)	ENSSLDG00000012166	uevld (ENSSLDG00000012216)	spty2d1 (ENSSLDG00000012243)	tmem86a (ENSSLDG00000012263)	IGSF22 (ENSSLDG00000012276)	B4GALNT4 (ENSSLDG00000012313)	ABTB2 (ENSSLDG00000012374)	BRSK2 (ENSSLDG00000012469)
Greater amberjack	MODERN SPECIES	82	fnbp4 (ENSSDUG00000020121)	agbl2 (ENSSDUG00000020103)	tmem17 (ENSSDUG00000020090)	ENSSDUG00000020083	SLC15A5 (ENSSDUG00000020060)	RAB19 (ENSSDUG00000020046)	hdhd5 (ENSSDUG00000020036)	ccdc77 (ENSSDUG00000020025)	ush1c (ENSSDUG00000019968)	abcc8 (ENSSDUG00000019907)	kcnj11 (ENSSDUG00000019894)	mob2a (ENSSDUG00000019872)	dusp8a (ENSSDUG00000019851)	PTPN5 (ENSSDUG00000019836)	ENSSDUG00000019821 #21	OSBPL5 (ENSSDUG00000019736) #22	phlda2 (ENSSDUG00000019713) #23	nap1l4a (ENSSDUG00000019681) #24	th (ENSSDUG00000019656) #25	igf2b (ENSSDUG00000019646) #26	mrpl23 (ENSSDUG00000019634)	ENSSDUG00000019606	CPT1A (ENSSDUG00000019472)	ENSSDUG00000019412	uevld (ENSSDUG00000019358)	spty2d1 (ENSSDUG00000019340)	tmem86a (ENSSDUG00000019334)	B4GALNT4 (ENSSDUG00000019305)	ABTB2 (ENSSDUG00000019236)	BRSK2 (ENSSDUG00000019194)	ldha (ENSSDUG00000019165)
Barramundi perch	MODERN SPECIES	97	ENSLCAG00010018947	ENSLCAG00010018944	ENSLCAG00010018942	SLC15A5 (ENSLCAG00010018939)	ccdc34 (ENSLCAG00010018937)	RAB19 (ENSLCAG00010018934)	hdhd5 (ENSLCAG00010018928)	ccdc77 (ENSLCAG00010018921)	ush1c (ENSLCAG00010018857)	abcc8 (ENSLCAG00010018693)	kcnj11 (ENSLCAG00010018630)	mob2a (ENSLCAG00010018611)	dusp8a (ENSLCAG00010018602)	PTPN5 (ENSLCAG00010018595)	ENSLCAG00010018576 #21	OSBPL5 (ENSLCAG00010018191) #22	phlda2 (ENSLCAG00010018141) #23	nap1l4a (ENSLCAG00010018135) #24	th (ENSLCAG00010018068) #25	igf2b (ENSLCAG00010018025) #26	mrpl23 (ENSLCAG00010018003)	ENSLCAG00010017998	CPT1A (ENSLCAG00010017655)	ENSLCAG00010017613	ENSLCAG00010017608	spty2d1 (ENSLCAG00010017601)	tmem86a (ENSLCAG00010017592)	IGSF22 (ENSLCAG00010017577)	B4GALNT4 (ENSLCAG00010017531)	ENSLCAG00010017518	ENSLCAG00010017513
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00940000160201	ENSGT00940000153899.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916	ENSGT00730000111271	ENSGT00940000156717.e	ENSGT00390000018051	ENSGT00390000010251	ENSGT00950000183002.A	ENSGT00940000156626.mb	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.c	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000164715	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000157661.e.a.c.a	ENSGT00940000157462.C.c.b
Turbot	MODERN SPECIES	1	tmem17 (ENSSMAG00000029401)	agbl2 (ENSSMAG00000009802)	ENSSMAG00000009765	ccdc34 (ENSSMAG00000009757)	ENSSMAG00000033870	hdhd5 (ENSSMAG00000009740)	ENSSMAG00000009713	ush1c (ENSSMAG00000009678)	abcc8 (ENSSMAG00000009551)	kcnj11 (ENSSMAG00000009539)	mob2a (ENSSMAG00000030422)	dusp8a (ENSSMAG00000032296)	ENSSMAG00000009506	ENSSMAG00000036443 #21	ENSSMAG00000009497 #21	ENSSMAG00000009437 #22	ENSSMAG00000009424 #23	nap1l4a (ENSSMAG00000009379) #24	th (ENSSMAG00000009330) #25	igf2b (ENSSMAG00000023920) #26	mrpl23 (ENSSMAG00000009264)	ENSSMAG00000009240	ENSSMAG00000009170	ENSSMAG00000009142	ENSSMAG00000009125	spty2d1 (ENSSMAG00000009117)	tmem86a (ENSSMAG00000009109)	IGSF22 (ENSSMAG00000009087)	ENSSMAG00000009030	ENSSMAG00000008949	ENSSMAG00000008855
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	16	SRGAP1 (ENSCSEG00000009265)	ENSCSEG00000009245	parp12a (ENSCSEG00000009223)	tbxas1 (ENSCSEG00000009189)	ENSCSEG00000009180	hipk2 (ENSCSEG00000009141)	ENSCSEG00000009086	mical3a (ENSCSEG00000009042)	ENSCSEG00000009030	ENSCSEG00000009012	kcnj11 (ENSCSEG00000009004)	mob2a (ENSCSEG00000008980)	dusp8a (ENSCSEG00000008955)	PTPN5 (ENSCSEG00000008920)	ENSCSEG00000008893 #21	OSBPL5 (ENSCSEG00000008867) #22	ENSCSEG00000008861 #22	phlda2 (ENSCSEG00000008851) #23	nap1l4a (ENSCSEG00000008814) #24	th (ENSCSEG00000008767) #25	igf2 (ENSCSEG00000008746) #26	mrpl23 (ENSCSEG00000008738)	ENSCSEG00000008380	CPT1A (ENSCSEG00000008255)	ENSCSEG00000008239	uevld (ENSCSEG00000008221)	spty2d1 (ENSCSEG00000008208)	tmem86a (ENSCSEG00000008196)	IGSF22 (ENSCSEG00000008147)	B4GALNT4 (ENSCSEG00000008093)	ABTB2 (ENSCSEG00000008058)
Tongue sole	MODERN SPECIES	16	ENSCSEG00000009245	parp12a (ENSCSEG00000009223)	tbxas1 (ENSCSEG00000009189)	ENSCSEG00000009180	hipk2 (ENSCSEG00000009141)	ENSCSEG00000009086	mical3a (ENSCSEG00000009042)	ENSCSEG00000009030	ENSCSEG00000009012	kcnj11 (ENSCSEG00000009004)	mob2a (ENSCSEG00000008980)	dusp8a (ENSCSEG00000008955)	PTPN5 (ENSCSEG00000008920)	ENSCSEG00000008893 #21	OSBPL5 (ENSCSEG00000008867) #22	ENSCSEG00000008861 #22	phlda2 (ENSCSEG00000008851) #23	nap1l4a (ENSCSEG00000008814) #24	th (ENSCSEG00000008767) #25	igf2 (ENSCSEG00000008746) #26	mrpl23 (ENSCSEG00000008738)	ENSCSEG00000008380	CPT1A (ENSCSEG00000008255)	ENSCSEG00000008239	uevld (ENSCSEG00000008221)	spty2d1 (ENSCSEG00000008208)	tmem86a (ENSCSEG00000008196)	IGSF22 (ENSCSEG00000008147)	B4GALNT4 (ENSCSEG00000008093)	ABTB2 (ENSCSEG00000008058)	ENSCSEG00000008053
Tiger tail seahorse	MODERN SPECIES	438	ENSHCOG00000008247	fnbp4 (ENSHCOG00000008272)	agbl2 (ENSHCOG00000008296)	tmem17 (ENSHCOG00000008318)	SLC15A5 (ENSHCOG00000008335)	ENSHCOG00000000821	hdhd5 (ENSHCOG00000008344)	ccdc77 (ENSHCOG00000008351)	ush1c (ENSHCOG00000008374)	abcc8 (ENSHCOG00000008416)	kcnj11 (ENSHCOG00000008432)	mob2a (ENSHCOG00000008442)	dusp8a (ENSHCOG00000008448)	PTPN5 (ENSHCOG00000008482)	ENSHCOG00000008507 #21	OSBPL5 (ENSHCOG00000008532) #22	phlda2 (ENSHCOG00000008547) #23	nap1l4a (ENSHCOG00000008558) #24	th (ENSHCOG00000009036) #25	igf2b (ENSHCOG00000009061) #26	mrpl23 (ENSHCOG00000009092)	ENSHCOG00000009124	CPT1A (ENSHCOG00000009187)	ENSHCOG00000009226	uevld (ENSHCOG00000009237)	spty2d1 (ENSHCOG00000009275)	tmem86a (ENSHCOG00000009289)	B4GALNT4 (ENSHCOG00000009344)	ABTB2 (ENSHCOG00000009387)	BRSK2 (ENSHCOG00000009433)	ldha (ENSHCOG00000009461)
Pinecone sodierfish	MODERN SPECIES	20	agbl2 (ENSMMDG00005007214)	tmem17 (ENSMMDG00005007212)	ENSMMDG00005007210	ENSMMDG00005007207	SLC15A5 (ENSMMDG00005007204)	ccdc34 (ENSMMDG00005007200)	RAB19 (ENSMMDG00005007113)	hdhd5 (ENSMMDG00005007106)	ccdc77 (ENSMMDG00005007103)	ush1c (ENSMMDG00005006881)	abcc8 (ENSMMDG00005006826)	kcnj11 (ENSMMDG00005006815)	mob2a (ENSMMDG00005006777)	dusp8a (ENSMMDG00005006766)	PTPN5 (ENSMMDG00005006753)	OSBPL5 (ENSMMDG00005005614) #22	phlda2 (ENSMMDG00005005596) #23	nap1l4a (ENSMMDG00005005591) #24	th (ENSMMDG00005005585) #25	igf2b (ENSMMDG00005005581) #26	mrpl23 (ENSMMDG00005005579)	ENSMMDG00005005575	CPT1A (ENSMMDG00005004966)	ENSMMDG00005004896	ENSMMDG00005004883	spty2d1 (ENSMMDG00005004880)	tmem86a (ENSMMDG00005004878)	IGSF22 (ENSMMDG00005004875)	B4GALNT4 (ENSMMDG00005004587)	ABTB2 (ENSMMDG00005004302)	BRSK2 (ENSMMDG00005004205)
Cod	MODERN SPECIES	22	miox (ENSGMOG00000002527)	lmf2a (ENSGMOG00000002553)	c2cd5 (ENSGMOG00000002597)	ENSGMOG00000002666	ddx11 (ENSGMOG00000002748)	fkbp4 (ENSGMOG00000002725)	wash1 (ENSGMOG00000002801)	ENSGMOG00000002825	ENSGMOG00000004846	ush1c (ENSGMOG00000004877)	abcc8 (ENSGMOG00000004921)	kcnj11 (ENSGMOG00000020415)	mob2a (ENSGMOG00000004985)	dusp8a (ENSGMOG00000031325)	ENSGMOG00000034993 #21	ENSGMOG00000019182 #22	phlda2 (ENSGMOG00000018409) #23	ENSGMOG00000018431	ENSGMOG00000027370	ENSGMOG00000018448	ENSGMOG00000012266	ENSGMOG00000027030	ENSGMOG00000012264	ENSGMOG00000012254	ENSGMOG00000012261	ENSGMOG00000012250	ENSGMOG00000012244	ENSGMOG00000012239	chkb (ENSGMOG00000012235)	ENSGMOG00000026995	cpt1b (ENSGMOG00000012229)
Protacanthopterygii	ANCESTRAL SPECIES	178		ENSGT00940000153903.a.b.a	ENSGT00940000153201	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000164122.b	ENSGT00940000161238.k	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24
Salmoninae	ANCESTRAL SPECIES	90	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.a.b.a	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000164122.b	ENSGT00940000161238.k	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j
Salmoninae_a	ANCESTRAL SPECIES	116	ENSGT00940000155480.c.a	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.b	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000161238.k	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.a.a	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000164122.b	ENSGT00940000161238.k	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000068260	ENSOMYG00000069379	ENSOMYG00000008517	ENSOMYG00000011121	ENSOMYG00000011634	tmem86a (ENSOMYG00000011794)	spty2d1 (ENSOMYG00000011804)	ENSOMYG00000011821	ENSOMYG00000011835	ENSOMYG00000050092	cpt1ab (ENSOMYG00000011953)	ENSOMYG00000012196	igf2b (ENSOMYG00000012223) #26	ENSOMYG00000012249	ENSOMYG00000071936	ENSOMYG00000012407 #22	ENSOMYG00000060413	ENSOMYG00000014741 #23	ENSOMYG00000059075	ENSOMYG00000055589	nap1l4a (ENSOMYG00000014754) #24	ENSOMYG00000056107	ENSOMYG00000014899	ENSOMYG00000016353	ENSOMYG00000016392	ENSOMYG00000016402 #25	ENSOMYG00000016836	ENSOMYG00000017766	ifitm5 (ENSOMYG00000017783)	ENSOMYG00000017808	syt12 (ENSOMYG00000017936)
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00940000155480.c.a	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.a.a	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000161238.k	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Coho salmon	MODERN SPECIES	14	ENSOKIG00005017142	BRSK2 (ENSOKIG00005015751)	ABTB2 (ENSOKIG00005015533)	ENSOKIG00005015519	B4GALNT4 (ENSOKIG00005015145)	tmem86a (ENSOKIG00005015121)	spty2d1 (ENSOKIG00005015109)	ENSOKIG00005015074	ENSOKIG00005015052	CPT1A (ENSOKIG00005014443)	ENSOKIG00005014372	igf2b (ENSOKIG00005014364) #26	ENSOKIG00005014359	ENSOKIG00005014352	mrpl23 (ENSOKIG00005014340)	OSBPL5 (ENSOKIG00005012920) #22	phlda2 (ENSOKIG00005012848) #23	nap1l4a (ENSOKIG00005012832) #24	FCSK (ENSOKIG00005011774)	commd9 (ENSOKIG00005011610)	PRR5L (ENSOKIG00005011590)	th (ENSOKIG00005011268) #25	ptdss2 (ENSOKIG00005010805)	cdkn1ca (ENSOKIG00005010781)	ifitm5 (ENSOKIG00005010770)	ENSOKIG00005010757	cat (ENSOKIG00005010059)	syt12 (ENSOKIG00005010001)	PEAK1 (ENSOKIG00005009990)	hmg20a (ENSOKIG00005009951)	ENSOKIG00005009927
Chinook salmon	MODERN SPECIES	10	ENSOTSG00005020979	tsg101a (ENSOTSG00005020677)	ldha (ENSOTSG00005020538)	BRSK2 (ENSOTSG00005020135)	ABTB2 (ENSOTSG00005020084)	B4GALNT4 (ENSOTSG00005019872)	tmem86a (ENSOTSG00005019865)	spty2d1 (ENSOTSG00005019863)	uevld (ENSOTSG00005019862)	ENSOTSG00005019859	CPT1A (ENSOTSG00005019296)	ENSOTSG00005019284	igf2b (ENSOTSG00005019282) #26	ENSOTSG00005019280	mrpl23 (ENSOTSG00005027223)	OSBPL5 (ENSOTSG00005025174) #22	phlda2 (ENSOTSG00005025163) #23	nap1l4a (ENSOTSG00005025162) #24	FCSK (ENSOTSG00005024944)	commd9 (ENSOTSG00005024916)	PRR5L (ENSOTSG00005024914)	th (ENSOTSG00005024912) #25	ptdss2 (ENSOTSG00005024757)	cdkn1ca (ENSOTSG00005024751)	ifitm5 (ENSOTSG00005024748)	cat (ENSOTSG00005022068)	syt12 (ENSOTSG00005022047)	PEAK1 (ENSOTSG00005022046)	hmg20a (ENSOTSG00005022044)	ENSOTSG00005022043	ENSOTSG00005022040
Salmo	ANCESTRAL SPECIES	50	ENSGT00940000155480.c.a	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.b	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000161238.k	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.f	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Atlantic salmon	MODERN SPECIES	1	tsg101a (ENSSSAG00000093918)	ldha (ENSSSAG00000041413)	ENSSSAG00000041623	ENSSSAG00000110204	ENSSSAG00000047838	ENSSSAG00000049007	tmem86a (ENSSSAG00000106050)	spty2d1 (ENSSSAG00000049082)	uevld (ENSSSAG00000049123)	ENSSSAG00000084303	ENSSSAG00000098753	ENSSSAG00000050712	ENSSSAG00000118027	igf2b (ENSSSAG00000051052) #26	RM23 (ENSSSAG00000121390)	ENSSSAG00000051329 #22	phlda2 (ENSSSAG00000060970) #23	ENSSSAG00000098299	nap1l4a (ENSSSAG00000060978) #24	ENSSSAG00000061207	ENSSSAG00000064293	ENSSSAG00000082778	ENSSSAG00000064310 #25	ENSSSAG00000104931	CDN1C (ENSSSAG00000065938)	ptdss2 (ENSSSAG00000064402)	ifitm5 (ENSSSAG00000065943)	cat (ENSSSAG00000065955)	syt12 (ENSSSAG00000087971)	peak1 (ENSSSAG00000066109)	ENSSSAG00000119527
River trout	MODERN SPECIES	37	ldha (ENSSTUG00000041545)	ENSSTUG00000041704	BRSK2 (ENSSTUG00000041784)	ENSSTUG00000043237	ABTB2 (ENSSTUG00000043264)	B4GALNT4 (ENSSTUG00000043630)	tmem86a (ENSSTUG00000043770)	spty2d1 (ENSSTUG00000043779)	ENSSTUG00000043787	ENSSTUG00000043913	ENSSTUG00000043962	ENSSTUG00000044477	igf2b (ENSSTUG00000000831) #26	mrpl23 (ENSSTUG00000002282)	ENSSTUG00000002328	OSBPL5 (ENSSTUG00000002352) #22	phlda2 (ENSSTUG00000002583) #23	nap1l4a (ENSSTUG00000002587) #24	FCSK (ENSSTUG00000002683)	commd9 (ENSSTUG00000004662)	PRR5L (ENSSTUG00000004683)	th (ENSSTUG00000004702) #25	ptdss2 (ENSSTUG00000004901)	cdkn1ca (ENSSTUG00000006067)	ifitm5 (ENSSTUG00000006074)	cat (ENSSTUG00000006137)	syt12 (ENSSTUG00000007792)	PEAK1 (ENSSTUG00000007813)	hmg20a (ENSSTUG00000007832)	ENSSTUG00000007871	ENSSTUG00000007878
Huchen	MODERN SPECIES	194														mrpl23 (ENSHHUG00000024642)	ENSHHUG00000024649	OSBPL5 (ENSHHUG00000024656) #22	phlda2 (ENSHHUG00000024840) #23	nap1l4a (ENSHHUG00000024847) #24	FCSK (ENSHHUG00000024894)	commd9 (ENSHHUG00000025053)	PRR5L (ENSHHUG00000025062)	th (ENSHHUG00000025072) #25	ptdss2 (ENSHHUG00000025160)	cdkn1ca (ENSHHUG00000025187)	ifitm5 (ENSHHUG00000025197)	ENSHHUG00000025200
Northern pike	MODERN SPECIES	18	ENSELUG00000022682	ENSELUG00000024922	ENSELUG00000022588	ENSELUG00000022529	ENSELUG00000027859	gsto1 (ENSELUG00000022497)	spty2d1 (ENSELUG00000022464)	tmem86a (ENSELUG00000022437)	B4GALNT4 (ENSELUG00000019193)	ENSELUG00000025977	ABTB2 (ENSELUG00000019086)	ENSELUG00000034031	igf2b (ENSELUG00000029387) #26	ENSELUG00000022230	mrpl23 (ENSELUG00000022256)	OSBPL5 (ENSELUG00000022285) #22	phlda2 (ENSELUG00000022294) #23	nap1l4a (ENSELUG00000022314) #24	tsg101a (ENSELUG00000022386)	ldha (ENSELUG00000022428)	BRSK2 (ENSELUG00000014751)	ENSELUG00000028459	ENSELUG00000014926	ENSELUG00000033596	MAGI2 (ENSELUG00000001736)	ENSELUG00000032975	ENSELUG00000024839	ENSELUG00000001735	ENSELUG00000028772	ENSELUG00000031792
Otomorpha	ANCESTRAL SPECIES	51	ENSGT01030000234588.b.b.b.b.a.b.a.h	ENSGT00940000177178	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.f	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00390000007739	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e	ENSGT00940000157661.e.a	ENSGT01060000248595.b.a.b.a.n.b
Otophysi	ANCESTRAL SPECIES	85	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.f	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00390000007739	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Characiphysae	ANCESTRAL SPECIES	57	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.f	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00390000007739	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Channel catfish	MODERN SPECIES	5	tnni2a.3 (ENSIPUG00000004514)	tnni2 (ENSIPUG00000004539)	ENSIPUG00000004583	ENSIPUG00000004645	ENSIPUG00000004650	tnnt3a (ENSIPUG00000004658)	myod1 (ENSIPUG00000004693)	zgc:172145 (ENSIPUG00000004699)	ush1c (ENSIPUG00000004724)	abcc8 (ENSIPUG00000004801)	kcnj11 (ENSIPUG00000005009)	mob2a (ENSIPUG00000005022)	dusp8a (ENSIPUG00000005041)	ENSIPUG00000005070 #21	ENSIPUG00000005122 #21	OSBPL5 (ENSIPUG00000005152) #22	phlda2 (ENSIPUG00000005186) #23	nap1l4a (ENSIPUG00000005201) #24	cpt1a (ENSIPUG00000005228)	ENSIPUG00000005334	ENSIPUG00000005353	mrpl23 (ENSIPUG00000005383)	igf2b (ENSIPUG00000005412) #26	th (ENSIPUG00000005463) #25	ENSIPUG00000005499	uevld (ENSIPUG00000005569)	spty2d1 (ENSIPUG00000005617)	tmem86a (ENSIPUG00000005654)	IGSF22 (ENSIPUG00000005662)	B4GALNT4 (ENSIPUG00000005683)	abtb2 (ENSIPUG00000005727)
Characiphysae_b	ANCESTRAL SPECIES	32	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004.f	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00390000007739	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Characoidei	ANCESTRAL SPECIES	68																ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00390000007739	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Mexicana tetra	MODERN SPECIES	780															ENSAMXG00000040242 #21	OSBPL5 (ENSAMXG00000016920) #22	phlda2 (ENSAMXG00000024859) #23	nap1l4a (ENSAMXG00000037540) #24	CPT1A (ENSAMXG00000016822)	ENSAMXG00000016782	mrpl23 (ENSAMXG00000016759)
Red-bellied piranha	MODERN SPECIES	300												ENSPNAG00000010271	ENSPNAG00000010291	ENSPNAG00000010305	ENSPNAG00000010332 #21	OSBPL5 (ENSPNAG00000010345) #22	phlda2 (ENSPNAG00000010357) #23	nap1l4a (ENSPNAG00000010389) #24	CPT1A (ENSPNAG00000010520)	ENSPNAG00000010536	mrpl23 (ENSPNAG00000010548)	igf2b (ENSPNAG00000010561) #26	th (ENSPNAG00000010605) #25	ENSPNAG00000010667	uevld (ENSPNAG00000010689)	spty2d1 (ENSPNAG00000010715)	tmem86a (ENSPNAG00000010737)	IGSF22 (ENSPNAG00000001454)	B4GALNT4 (ENSPNAG00000010887)	ABTB2 (ENSPNAG00000010991)	BRSK2 (ENSPNAG00000011016)
Electric eel	MODERN SPECIES	236	SYT8 (ENSEEEG00000007387)	ENSEEEG00000007390	tnni2a.1 (ENSEEEG00000007391)	tnni2a.2 (ENSEEEG00000007393)	tnni2a.3 (ENSEEEG00000007394)	tnni2a.4 (ENSEEEG00000007412)	ENSEEEG00000007427	tnnt3a (ENSEEEG00000007429)	myod1 (ENSEEEG00000007431)	ush1c (ENSEEEG00000007432)	abcc8 (ENSEEEG00000007434)	kcnj11 (ENSEEEG00000007443)	mob2a (ENSEEEG00000007448)	dusp8a (ENSEEEG00000007456)	ENSEEEG00000007463 #21	OSBPL5 (ENSEEEG00000007471) #22	phlda2 (ENSEEEG00000007614) #23	nap1l4a (ENSEEEG00000007616) #24	ENSEEEG00000007618
Cyprinoidei	ANCESTRAL SPECIES	93	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.a.a	ENSGT00920000149457	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a.n	ENSGT00940000160004.f	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159 #24	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00390000007739	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT01050000244857.A.a.b.e	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k	ENSGT00940000153201
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	296	ENSGT00940000160892	ENSGT01030000234588.b.b.b.b.a.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT00940000153901.a.b.b.a	ENSGT00940000167812.c	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.a.a.a	ENSGT00920000149457.b	ENSGT00950000183002.A.d	ENSGT00940000156626.w.a	ENSGT00990000203615.a.a.a.b.e	ENSGT01050000244956.a.a.n.a	ENSGT00940000160004.f.b	ENSGT00940000156870.cb #21	ENSGT00940000159535.g #22	ENSGT00940000169159.b #24	ENSGT01060000248595.b.a.b.a.n.a.b	ENSGT00940000164715.b.a	ENSGT00390000007739.a.b	ENSGT00940000160745.d.b #26	ENSGT00950000182885.C.a.a #25	ENSGT00940000161238.k.b	ENSGT00940000153903.a.b.b.c.b	ENSGT00940000154133.A.b	ENSGT00390000007101.d.b.f	ENSGT01050000244857.A.a.b.e.b	ENSGT00940000157661.e.a.a	ENSGT00940000157462.C.c.a.k.a	ENSGT00940000153201.b	ENSGT00940000153903.a.b.a.b.a
Cyprininae_a	ANCESTRAL SPECIES	16	ENSGT01030000234588.b.b.b.b.a.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT00940000153901.a.b.b.b	ENSGT00940000153901.a.b.b.a	ENSGT00940000167812.c	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.a.a.a	ENSGT00920000149457.b	ENSGT00950000183002.A.d	ENSGT00940000156626.w.a	ENSGT00990000203615.a.a.a.b.e	ENSGT01050000244956.a.a.n.a	ENSGT00940000160004.f.b	ENSGT00940000156870.cb #21	ENSGT00940000159535.g #22	ENSGT00940000169159.b #24	ENSGT01060000248595.b.a.b.a.n.a.b	ENSGT00940000164715.b.a	ENSGT00390000007739.b	ENSGT00940000160745.d.b #26	ENSGT00950000182885.C.a.a #25	ENSGT00940000161238.k.b	ENSGT00940000153903.a.b.b.c.b	ENSGT00940000154133.A.b	ENSGT00390000007101.d.b.f	ENSGT01050000244857.A.a.b.e.b	ENSGT00940000157661.e.a.a	ENSGT00940000157462.C.c.a.k.a	ENSGT00940000153201.b	ENSGT00940000153903.a.b.a.b.a
Common carp reference	MODERN SPECIES	37	tnni2a.3 (ENSCCRG00000007849)	ENSCCRG00000007923	ENSCCRG00000007936	tnnt3a (ENSCCRG00000062720)	myod1 (ENSCCRG00000049312)	zgc:172145 (ENSCCRG00000059740)	ush1c (ENSCCRG00000013479)	abcc8 (ENSCCRG00000006460)	ENSCCRG00000078356	kcnj11 (ENSCCRG00000078656)	mob2a (ENSCCRG00000062835)	dusp8a (ENSCCRG00000066543)	ENSCCRG00000070357 #21	ENSCCRG00000066001 #21	ENSCCRG00000068830	ENSCCRG00000031128 #22	phlda2 (ENSCCRG00000059697) #23	nap1l4a (ENSCCRG00000031099) #24	ENSCCRG00000031052	ENSCCRG00000031922	ENSCCRG00000021606	ENSCCRG00000082707	ENSCCRG00000069666	igf2b (ENSCCRG00000043613) #26	th (ENSCCRG00000072377) #25	ENSCCRG00000046641	uevld (ENSCCRG00000046630)	spty2d1 (ENSCCRG00000046624)	tmem86a (ENSCCRG00000001012)	ENSCCRG00000013489	ENSCCRG00000028735
Golden-line barbel	MODERN SPECIES	366	ENSSGRG00000039426	ENSSGRG00000039427	ENSSGRG00000039428	tnni2a.4 (ENSSGRG00000039431)	ENSSGRG00000039467	ENSSGRG00000039475	tnnt3a (ENSSGRG00000039479)	myod1 (ENSSGRG00000039484)	zgc:172145 (ENSSGRG00000039515)	ush1c (ENSSGRG00000039517)	abcc8 (ENSSGRG00000039570)	kcnj11 (ENSSGRG00000039775)	mob2a (ENSSGRG00000039776)	dusp8a (ENSSGRG00000039777)	ENSSGRG00000039787 #21	OSBPL5 (ENSSGRG00000039818) #22	phlda2 (ENSSGRG00000041036) #23	nap1l4a (ENSSGRG00000041037) #24
Goldfish	MODERN SPECIES	17	SYT8 (ENSCARG00000011614)	tnni2a.1 (ENSCARG00000011629)	ENSCARG00000011653	ENSCARG00000011667	tnnt3a (ENSCARG00000011669)	myod1 (ENSCARG00000011672)	zgc:172145 (ENSCARG00000011680)	ush1c (ENSCARG00000011715)	abcc8 (ENSCARG00000011954)	kcnj11 (ENSCARG00000012748)	mob2a (ENSCARG00000012767)	dusp8a (ENSCARG00000012784)	ENSCARG00000012795 #21	ENSCARG00000012810 #21	ENSCARG00000012825	OSBPL5 (ENSCARG00000012856) #22	phlda2 (ENSCARG00000013035) #23	nap1l4a (ENSCARG00000013043) #24	ENSCARG00000013069	mrpl23 (ENSCARG00000013181)	ENSCARG00000013197	igf2b (ENSCARG00000013203) #26	th (ENSCARG00000013219) #25	ENSCARG00000013357	spty2d1 (ENSCARG00000013365)	tmem86a (ENSCARG00000013367)	B4GALNT4 (ENSCARG00000013389)	ABTB2 (ENSCARG00000013681)	BRSK2 (ENSCARG00000013704)	ENSCARG00000013859	ENSCARG00000013870
Cyprininae	ANCESTRAL SPECIES	219	ENSGT00390000017767.a.b	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a.b	ENSGT01030000234588.b.b.b.b.a.a.b.a	ENSGT00940000153901.a.b.b.b	ENSGT00940000167812.d	ENSGT00940000158477.b	ENSGT00950000182959.b.a.a.b	ENSGT00920000149457.a	ENSGT00950000183002.A.c	ENSGT00940000156626.w.b	ENSGT00990000203615.a.a.a.b.f	ENSGT01050000244956.a.a.n.b	ENSGT00940000160004.f.a	ENSGT00940000156870.bb.b.a #21	ENSGT00940000159535.h #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159.a #24	ENSGT01060000248595.b.a.b.a.n.a.a	ENSGT00940000164715.b.b	ENSGT00390000007739.a.a	ENSGT00940000160745.d.a #26	ENSGT00950000182885.C.a.b #25	ENSGT00940000161238.k.a	ENSGT00940000153903.a.b.b.c.a	ENSGT00940000154133.A.a	ENSGT00390000007101.d.b.e	ENSGT01050000244857.A.a.b.e.a	ENSGT00940000157661.e.a.b	ENSGT00940000157462.C.c.a.k.b	ENSGT00940000153201.a
Cyprininae_a	ANCESTRAL SPECIES	154	ENSGT00950000182839.B.a.a.l.a	ENSGT00390000017767.a.b	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a.b	ENSGT01030000234588.b.b.b.b.a.a.b.a	ENSGT00940000167812.d	ENSGT00940000158477.b	ENSGT00950000182959.b.a.a.b	ENSGT00920000149457.a	ENSGT00950000183002.A.c	ENSGT00940000156626.w.b	ENSGT00990000203615.a.a.a.b.f	ENSGT01050000244956.a.a.n.b	ENSGT00940000160004.f.a	ENSGT00940000156870.bb.b.a #21	ENSGT00940000159535.h #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159.a #24	ENSGT01060000248595.b.a.b.a.n.a.a	ENSGT00940000164715.b.b	ENSGT00390000007739.a.a	ENSGT00940000160745.d.a #26	ENSGT00950000182885.C.a.b #25	ENSGT00940000161238.k.a	ENSGT00940000153903.a.b.b.c.a	ENSGT00940000154133.A.a	ENSGT00390000007101.d.b.e	ENSGT01050000244857.A.a.b.e.a	ENSGT00940000157661.e.a.b	ENSGT00940000157462.C.c.a.k.b	ENSGT00940000153201.a
Common carp reference	MODERN SPECIES	33	ENSCCRG00000049337	ENSCCRG00000059451	TNNT3 (ENSCCRG00000056652)	myod1 (ENSCCRG00000078915)	zgc:172145 (ENSCCRG00000074849)	ENSCCRG00000081027	ush1c (ENSCCRG00000014177)	abcc8 (ENSCCRG00000004760)	kcnj11 (ENSCCRG00000075210)	mob2a (ENSCCRG00000008336)	dusp8a (ENSCCRG00000056844)	ENSCCRG00000022539 #21	ENSCCRG00000075142	ENSCCRG00000070395 #21	ENSCCRG00000006126 #21	ENSCCRG00000050262 #22	phlda2 (ENSCCRG00000031114) #23	nap1l4a (ENSCCRG00000053707) #24	ENSCCRG00000076888	ENSCCRG00000031991	ENSCCRG00000021778	mrpl23 (ENSCCRG00000021780)	igf2b (ENSCCRG00000077650) #26	th (ENSCCRG00000028165) #25	ENSCCRG00000032449	uevld (ENSCCRG00000032457)	spty2d1 (ENSCCRG00000032466)	tmem86a (ENSCCRG00000055822)	ENSCCRG00000028725	ENSCCRG00000065686	ENSCCRG00000028788
Golden-line barbel	MODERN SPECIES	482											abcc8 (ENSSGRG00000019205)	MOB2 (ENSSGRG00000019221)	mob2a (ENSSGRG00000019222)	dusp8a (ENSSGRG00000019224)	ENSSGRG00000019231 #21	OSBPL5 (ENSSGRG00000019248) #22	phlda2 (ENSSGRG00000020334) #23	nap1l4a (ENSSGRG00000020335) #24	ENSSGRG00000020391	ENSSGRG00000023673	mrpl23 (ENSSGRG00000023674)	igf2b (ENSSGRG00000023677) #26	th (ENSSGRG00000023680) #25	ENSSGRG00000023688	uevld (ENSSGRG00000023690)	spty2d1 (ENSSGRG00000023692)	tmem86a (ENSSGRG00000023693)
Goldfish	MODERN SPECIES	45	RASSF8 (ENSCARG00000047148)	ENSCARG00000047172	tnni2a.1 (ENSCARG00000047183)	tnni2a.2 (ENSCARG00000047218)	ENSCARG00000047242	tnni2a.3 (ENSCARG00000047250)	ENSCARG00000047262	myod1 (ENSCARG00000047275)	zgc:172145 (ENSCARG00000047288)	ush1c (ENSCARG00000047304)	abcc8 (ENSCARG00000047502)	kcnj11 (ENSCARG00000048580)	mob2a (ENSCARG00000048612)	dusp8a (ENSCARG00000048679)	ENSCARG00000048706	OSBPL5 (ENSCARG00000048773) #22	phlda2 (ENSCARG00000049767) #23	nap1l4a (ENSCARG00000049783) #24	ENSCARG00000049918	ENSCARG00000050525	mrpl23 (ENSCARG00000050540)	igf2b (ENSCARG00000050562) #26	th (ENSCARG00000050601) #25	ENSCARG00000050838	uevld (ENSCARG00000050882)	spty2d1 (ENSCARG00000050914)	tmem86a (ENSCARG00000050925)	B4GALNT4 (ENSCARG00000050960)	ABTB2 (ENSCARG00000051344)	BRSK2 (ENSCARG00000051567)	ENSCARG00000053942
Zebrafish	MODERN SPECIES	17	hexa (ENSDARG00000052113)	nr2e3 (ENSDARG00000045904)	stoml1 (ENSDARG00000062142)	CYP11A1 (ENSDARG00000092696)	cyp11a1.1 (ENSDARG00000002347)	ENSDARG00000051858	stra6 (ENSDARG00000051874)	islr2 (ENSDARG00000051875)	ush1c (ENSDARG00000051876)	abcc8 (ENSDARG00000051879)	kcnj11 (ENSDARG00000051880)	mob2a (ENSDARG00000023214)	dusp8a (ENSDARG00000009299)	ENSDARG00000091539 #21	ENSDARG00000086511 #21	OSBPL5 (ENSDARG00000076002) #22	ENSDARG00000103841	ENSDARG00000116285	phlda2 (ENSDARG00000042874) #23	nap1l4a (ENSDARG00000070560) #24	ENSDARG00000062054	ENSDARG00000062059	zgc:123060 (ENSDARG00000095051)	mrpl23 (ENSDARG00000045696)	igf2b (ENSDARG00000033307) #26	th (ENSDARG00000030621) #25	ENSDARG00000051836	uevld (ENSDARG00000009266)	ENSDARG00000094163	ENSDARG00000095586	spty2d1 (ENSDARG00000033889)
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	71	ENSGT00390000017767.a.b	ENSGT00940000160892	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.h	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A.f	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b.d	ENSGT00940000159535.i #22	ENSGT00440000039564.a.b.i #23	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715.b	ENSGT00940000160745.d #26	ENSGT00390000007739	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT00940000158682	ENSGT00940000153212.y.a	ENSGT00940000159811	ENSGT00940000163703.b	ENSGT00940000158492	ENSGT00960000187150
Atlantic herring	MODERN SPECIES	19	fgf3 (ENSCHAG00000002250)	ANO1 (ENSCHAG00000002318)	shank2b (ENSCHAG00000004324)	endouc (ENSCHAG00000006479)	POLR3B (ENSCHAG00000006626)	rfx4 (ENSCHAG00000007091)	ric8b (ENSCHAG00000007520)	ENSCHAG00000007638	tmem263 (ENSCHAG00000007649)	si:ch73-62b13.1 (ENSCHAG00000007667)	mterf2 (ENSCHAG00000007688)	ENSCHAG00000007731	smpd3 (ENSCHAG00000007772)	ENSCHAG00000007790	zgc:77748 (ENSCHAG00000007808)	OSBPL5 (ENSCHAG00000007848) #22	phlda2 (ENSCHAG00000008832) #23	ENSCHAG00000008842	CPT1A (ENSCHAG00000008928)	ENSCHAG00000010499	igf2b (ENSCHAG00000010568) #26	mrpl23 (ENSCHAG00000010615)	sf3b3 (ENSCHAG00000010639)	il34 (ENSCHAG00000010849)	lonp2 (ENSCHAG00000010871)	siah1 (ENSCHAG00000011918)	n4bp1 (ENSCHAG00000011931)	nudt21 (ENSCHAG00000011942)	ENSCHAG00000012032	NUDT21 (ENSCHAG00000012056)	ENSCHAG00000012073
Denticle herring	MODERN SPECIES	8	tnni2a.2 (ENSDCDG00000031178)	ENSDCDG00000031179	ENSDCDG00000031186	TNNI2 (ENSDCDG00000005638)	tnni2a.4 (ENSDCDG00000005740)	ENSDCDG00000006819	ENSDCDG00000006877	MYOD1 (ENSDCDG00000006890)	zgc:172145 (ENSDCDG00000006912)	ush1c (ENSDCDG00000007075)	abcc8 (ENSDCDG00000007647)	kcnj11 (ENSDCDG00000007731)	mob2a (ENSDCDG00000007735)	dusp8a (ENSDCDG00000007781)	ENSDCDG00000007814 #21	OSBPL5 (ENSDCDG00000008088) #22	phlda2 (ENSDCDG00000013795) #23	ENSDCDG00000013798	ENSDCDG00000013856	ENSDCDG00000014858	igf2b (ENSDCDG00000014862) #26	mrpl23 (ENSDCDG00000014864)	sf3b3 (ENSDCDG00000014868)	il34 (ENSDCDG00000014875)	ENSDCDG00000014877	siah1 (ENSDCDG00000014878)	n4bp1 (ENSDCDG00000014880)	ENSDCDG00000014881	ENSDCDG00000014883	ENSDCDG00000014908	ENSDCDG00000017098
Clupeiformes	ANCESTRAL SPECIES	449											ENSGT00990000203615.a.a.a.b.c	ENSGT01050000244956.a.a	ENSGT00940000160004.f	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535.j #22	ENSGT00940000160333	ENSGT00440000039564.a.b.j #23	ENSGT00940000153362.b	ENSGT00390000006347.a
Atlantic herring	MODERN SPECIES	22	ENSCHAG00000004224	ENSCHAG00000004256	ENSCHAG00000004279	tnni2b.1 (ENSCHAG00000004290)	ENSCHAG00000004434	ENSCHAG00000004444	tnnt3b (ENSCHAG00000004458)	MYOD1 (ENSCHAG00000004523)	OTOG (ENSCHAG00000004569)	ABCC8 (ENSCHAG00000005413)	KCNJ11 (ENSCHAG00000013212)	mob2b (ENSCHAG00000013224)	DUSP8 (ENSCHAG00000013334)	PTPN5 (ENSCHAG00000013347)	ENSCHAG00000013402 #21	OSBPL5 (ENSCHAG00000013553) #22	slc22a18 (ENSCHAG00000015000)	PHLDA2 (ENSCHAG00000015121) #23	PHLDA2 (ENSCHAG00000015146) #23	nap1l4b (ENSCHAG00000015163)	cars1 (ENSCHAG00000015312)	atpv0e2 (ENSCHAG00000017756)	MICAL2 (ENSCHAG00000017792)	dkk3a (ENSCHAG00000017988)	usp47 (ENSCHAG00000018034)	CLEC3A (ENSCHAG00000019083)	vat1l (ENSCHAG00000019123)	bola3 (ENSCHAG00000019149)	bco1 (ENSCHAG00000019168)	bco1l (ENSCHAG00000019516)	ENSCHAG00000019741
Denticle herring	MODERN SPECIES	7	pde8a (ENSDCDG00000029146)	ENSDCDG00000029124	FSD2 (ENSDCDG00000029121)	WHAMM (ENSDCDG00000029117)	HOMER2 (ENSDCDG00000029113)	RAMAC (ENSDCDG00000029111)	nap1l4b (ENSDCDG00000029103)	cars1 (ENSDCDG00000028076)	SBF2 (ENSDCDG00000022757)	adma (ENSDCDG00000022641)	ENSDCDG00000022640	ENSDCDG00000022639	mob2b (ENSDCDG00000031645)	DUSP8 (ENSDCDG00000031643)	PTPN5 (ENSDCDG00000031636)	OSBPL5 (ENSDCDG00000030457) #22	dhcr7 (ENSDCDG00000030426)	MMP15 (ENSDCDG00000030195)	ctr9 (ENSDCDG00000030144)	zgc:194679 (ENSDCDG00000030130)	ENSDCDG00000030128	ist1 (ENSDCDG00000030121)	ENSDCDG00000030117	dhodh (ENSDCDG00000030109)	ENSDCDG00000030108	sult5a1 (ENSDCDG00000030107)	SLC22A31 (ENSDCDG00000030106)	ANKRD11 (ENSDCDG00000030102)	SPG7 (ENSDCDG00000028904)	cdh15 (ENSDCDG00000028828)	ENSDCDG00000028819
Osteoglossiformes	ANCESTRAL SPECIES	63	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812.a	ENSGT00940000158477.a.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00940000159916.d	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b.a #23	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a.n.a	ENSGT00940000164715	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00950000182885.C.a #25	ENSGT00940000161238.m	ENSGT00940000153903.a.b.b	ENSGT00940000155653.b.a	ENSGT00940000164122.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123.f
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	20	ENSSFOG00015000969	tnni2a.2 (ENSSFOG00015001029)	tnni2a.4 (ENSSFOG00015001189)	ENSSFOG00015001301	ENSSFOG00015001312	TNNT3 (ENSSFOG00015001321)	myod1 (ENSSFOG00015001375)	zgc:172145 (ENSSFOG00015001401)	OTOG (ENSSFOG00015025460)	ush1c (ENSSFOG00015001489)	abcc8 (ENSSFOG00015001504)	kcnj11 (ENSSFOG00015025143)	MOB2 (ENSSFOG00015001705)	dusp8a (ENSSFOG00015025183)	PTPN5 (ENSSFOG00015001826)	OSBPL5 (ENSSFOG00015002010) #22	phlda2 (ENSSFOG00015002113) #23	nap1l4b (ENSSFOG00015002142)	cars1 (ENSSFOG00015002202)	CPT1A (ENSSFOG00015002348)	ENSSFOG00015002434	ENSSFOG00015031340 #26	mrpl23 (ENSSFOG00015024842)	th (ENSSFOG00015002530) #25	ENSSFOG00015002584	ENSSFOG00015002603	spty2d1 (ENSSFOG00015002655)	tmem86a (ENSSFOG00015002671)	IGSF22 (ENSSFOG00015002677)	B4GALNT4 (ENSSFOG00015002771)	ABTB2 (ENSSFOG00015002829)
Asian bonytongue	MODERN SPECIES	2	ENSSFOG00015011996	ric8a (ENSSFOG00015028913)	BET1L (ENSSFOG00015024284)	DRD4 (ENSSFOG00015011928)	CTSD (ENSSFOG00015011884)	ENSSFOG00015011872	ENSSFOG00015011834	tnnt3a (ENSSFOG00015011790)	myod1 (ENSSFOG00015029499)	ENSSFOG00015011750	ENSSFOG00015011743	MOB2 (ENSSFOG00015011693)	DUSP8 (ENSSFOG00015027508)	PTPN5 (ENSSFOG00015011591)	ENSSFOG00015011522 #21	OSBPL5 (ENSSFOG00015011457) #22	slc22a18 (ENSSFOG00015011420)	phlda2 (ENSSFOG00015011437) #23	NAP1L4 (ENSSFOG00015011392)	igf2b (ENSSFOG00015029596) #26	ENSSFOG00015011350	B4GALNT4 (ENSSFOG00015011329)	ABTB2 (ENSSFOG00015011282)	BRSK2 (ENSSFOG00015011235)	ldha (ENSSFOG00015011210)	tsg101a (ENSSFOG00015011182)	ENSSFOG00015011157	rassf7b (ENSSFOG00015027069)	ENSSFOG00015026690	ENSSFOG00015025499	ldlrad3 (ENSSFOG00015026744)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	38	TNNI2 (ENSPKIG00000002556)	ENSPKIG00000002535	ENSPKIG00000002526	ENSPKIG00000002481	TNNT3 (ENSPKIG00000002402)	MYOD1 (ENSPKIG00000002354)	zgc:172145 (ENSPKIG00000002339)	OTOG (ENSPKIG00000002227)	ush1c (ENSPKIG00000002131)	abcc8 (ENSPKIG00000002041)	kcnj11 (ENSPKIG00000001997)	MOB2 (ENSPKIG00000001948)	dusp8a (ENSPKIG00000001877)	PTPN5 (ENSPKIG00000001814)	ENSPKIG00000001750 #21	OSBPL5 (ENSPKIG00000001623) #22	phlda2 (ENSPKIG00000001555) #23	nap1l4b (ENSPKIG00000001515)	cars1 (ENSPKIG00000001391)	CPT1A (ENSPKIG00000001242)	ENSPKIG00000001158	igf2b (ENSPKIG00000001127) #26	mrpl23 (ENSPKIG00000001102)	th (ENSPKIG00000001023) #25	ENSPKIG00000000893	uevld (ENSPKIG00000000822)	ENSPKIG00000000785	tmem86a (ENSPKIG00000000765)	IGSF22 (ENSPKIG00000000742)	B4GALNT4 (ENSPKIG00000000683)	ABTB2 (ENSPKIG00000000611)
P. kingsleyae	MODERN SPECIES	12	PPP6R3 (ENSPKIG00000014718)	ric8a (ENSPKIG00000014659)	BET1L (ENSPKIG00000014630)	DRD4 (ENSPKIG00000014609)	ctsd (ENSPKIG00000014578)	ENSPKIG00000014558	ENSPKIG00000014539	ENSPKIG00000014525	tnnt3a (ENSPKIG00000014475)	MYOD1 (ENSPKIG00000014431)	MOB2 (ENSPKIG00000014366)	DUSP8 (ENSPKIG00000014327)	PTPN5 (ENSPKIG00000014280)	ENSPKIG00000014235 #21	ENSPKIG00000014210 #21	OSBPL5 (ENSPKIG00000014169) #22	slc22a18 (ENSPKIG00000014108)	phlda2 (ENSPKIG00000014074) #23	NAP1L4 (ENSPKIG00000013990)	ENSPKIG00000013936 #26	ENSPKIG00000013906	B4GALNT4 (ENSPKIG00000013857)	ABTB2 (ENSPKIG00000013765)	BRSK2 (ENSPKIG00000013692)	ENSPKIG00000013662	ldha (ENSPKIG00000013627)	ENSPKIG00000013539	hrasb (ENSPKIG00000013507)	rassf7b (ENSPKIG00000013492)	ascl1b (ENSPKIG00000013472)	slc1a2a (ENSPKIG00000013432)
Spotted gar	MODERN SPECIES	666	pdhx (ENSLOCG00000001356)	ENSLOCG00000001378	slc1a2a (ENSLOCG00000001388)	PAMR1 (ENSLOCG00000001426)	FJX1 (ENSLOCG00000017317)	LDLRAD3 (ENSLOCG00000001462)	ENSLOCG00000001491	mrpl21 (ENSLOCG00000001501)	ighmbp2 (ENSLOCG00000001512)	syt12 (ENSLOCG00000001528)	ascl1b (ENSLOCG00000017318)	mob2a (ENSLOCG00000001539)	dusp8a (ENSLOCG00000001567)	PTPN5 (ENSLOCG00000001577)	ENSLOCG00000001607 #21	OSBPL5 (ENSLOCG00000001627) #22	slc22a18 (ENSLOCG00000001662)	phlda2 (ENSLOCG00000017319) #23	nap1l4b (ENSLOCG00000001679)	cars1 (ENSLOCG00000001712)	cpt1aa (ENSLOCG00000001740)	ENSLOCG00000001786	igf2b (ENSLOCG00000001806) #26	mrpl23 (ENSLOCG00000001825)	th (ENSLOCG00000001834) #25	ENSLOCG00000001862	uevld (ENSLOCG00000001881)	spty2d1 (ENSLOCG00000001901)	tmem86a (ENSLOCG00000001930)	IGSF22 (ENSLOCG00000001945)	B4GALNT4 (ENSLOCG00000001959)
Reedfish	MODERN SPECIES	565												ENSECRG00000022519 #21	ENSECRG00000022600 #21	ENSECRG00000022675 #21	ENSECRG00000022682 #21	OSBPL5 (ENSECRG00000022795) #22	slc22a18 (ENSECRG00000022887)	phlda2 (ENSECRG00000022890) #23	nap1l4b (ENSECRG00000022891)
Sarcopterygii	ANCESTRAL SPECIES	61							ENSGT01000000215745	ENSGT00940000153903.a.b.b	ENSGT00940000164956	ENSGT00940000161479	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00390000017397	ENSGT00940000158989	ENSGT00940000159302	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00530000063576.A	ENSGT00940000158627	ENSGT00930000151035.a	ENSGT00390000005535	ENSGT00940000164949	ENSGT00940000164715
Tetrapoda	ANCESTRAL SPECIES	9	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000158300	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000158477	ENSGT01030000234990	ENSGT00940000153901.a.b
Amniota	ANCESTRAL SPECIES	20	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Sauria	ANCESTRAL SPECIES	3	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000164956	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Episquamata	ANCESTRAL SPECIES		ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00500000044950	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00500000044950	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000165300	ENSGT00940000163041	ENSGT00950000182885.C.a #25
Elapidae	ANCESTRAL SPECIES	3	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00500000044950	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b.q #23	ENSGT00440000039564.a.b.r #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00960000193175	ENSGT00940000161001	ENSGT00940000160588.k	ENSGT00940000160588.l	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287
Indian cobra	MODERN SPECIES		ENSNNAG00000013869	KCNC1 (ENSNNAG00000013849)	SERGEF (ENSNNAG00000013832)	TPH1 (ENSNNAG00000013808) ##25	SAAL1 (ENSNNAG00000013771)	HPS5 (ENSNNAG00000013337)	GTF2H1 (ENSNNAG00000013205)	LDHA (ENSNNAG00000013178)	TSG101 (ENSNNAG00000013150)	ENSNNAG00000013120	SPTY2D1 (ENSNNAG00000013097)	TMEM86A (ENSNNAG00000013088)	IGSF22 (ENSNNAG00000013035)	PTPN5 (ENSNNAG00000012998)	PTPRJ (ENSNNAG00000012938) #21	OSBPL5 (ENSNNAG00000010423) #22	PSMG1 (ENSNNAG00000010243)	ENSNNAG00000010198	CARS1 (ENSNNAG00000010101)	NAP1L4 (ENSNNAG00000009899)	ENSNNAG00000009863 #23	ENSNNAG00000009837 #23	SLC22A18 (ENSNNAG00000009743)	CDKN1C (ENSNNAG00000009723)	ENSNNAG00000009687	KCNQ1 (ENSNNAG00000009618)	ENSNNAG00000009576	ENSNNAG00000009528	TSSC4 (ENSNNAG00000009521)	ENSNNAG00000009415	CD81 (ENSNNAG00000009392)
Elapidae_a	ANCESTRAL SPECIES	29	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00500000044950	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b.q #23	ENSGT00440000039564.a.b.r #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00960000193175	ENSGT00940000161001	ENSGT00940000160588.k	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00940000165300	ENSGT00950000182885.C.a #25
Acanthophiinae	ANCESTRAL SPECIES	29	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00500000044950	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b.q #23	ENSGT00440000039564.a.b.r #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00960000193175	ENSGT00940000161001	ENSGT00940000160588.k	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00940000165300	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Eastern brown snake	MODERN SPECIES	32	MYOD1 (ENSPTXG00000000885)	KCNC1 (ENSPTXG00000000887)	SERGEF (ENSPTXG00000000888)	TPH1 (ENSPTXG00000000890) ##25	SAAL1 (ENSPTXG00000000891)	HPS5 (ENSPTXG00000000894)	GTF2H1 (ENSPTXG00000000897)	LDHA (ENSPTXG00000000902)	TSG101 (ENSPTXG00000000909)	ENSPTXG00000000912	SPTY2D1 (ENSPTXG00000000916)	TMEM86A (ENSPTXG00000000920)	IGSF22 (ENSPTXG00000000928)	PTPN5 (ENSPTXG00000000933)	PTPRJ (ENSPTXG00000000941) #21	OSBPL5 (ENSPTXG00000000956) #22	PSMG1 (ENSPTXG00000000972)	CARS1 (ENSPTXG00000000979)	NAP1L4 (ENSPTXG00000000988)	ENSPTXG00000000994 #23	ENSPTXG00000000996 #23	SLC22A18 (ENSPTXG00000000998)	CDKN1C (ENSPTXG00000001001)	ENSPTXG00000001002	KCNQ1 (ENSPTXG00000001009)	TRPM5 (ENSPTXG00000001012)	TSSC4 (ENSPTXG00000001018)	CD81 (ENSPTXG00000001019)	ENSPTXG00000001022	ENSPTXG00000001024	TH (ENSPTXG00000001029) #25
Mainland tiger snake	MODERN SPECIES	22	MYOD1 (ENSNSUG00000018125)	KCNC1 (ENSNSUG00000018123)	SERGEF (ENSNSUG00000018122)	TPH1 (ENSNSUG00000018121) ##25	SAAL1 (ENSNSUG00000018114)	ENSNSUG00000018113	ENSNSUG00000018112	ENSNSUG00000018111	LDHA (ENSNSUG00000018110)	TSG101 (ENSNSUG00000018109)	ENSNSUG00000018106	SPTY2D1 (ENSNSUG00000018105)	TMEM86A (ENSNSUG00000018086)	PTPN5 (ENSNSUG00000018080)	PTPRJ (ENSNSUG00000018065) #21	OSBPL5 (ENSNSUG00000018055) #22	PSMG1 (ENSNSUG00000018054)	CARS1 (ENSNSUG00000017473)	NAP1L4 (ENSNSUG00000017466)	ENSNSUG00000017462 #23	ENSNSUG00000017461 #23	SLC22A18 (ENSNSUG00000017460)	CDKN1C (ENSNSUG00000017459)	ENSNSUG00000017458	KCNQ1 (ENSNSUG00000017457)	TRPM5 (ENSNSUG00000017452)	TSSC4 (ENSNSUG00000017451)	ENSNSUG00000017450	CD81 (ENSNSUG00000017449)	ENSNSUG00000017448	ASCL2 (ENSNSUG00000017447)
Blue-lipped sea krait	MODERN SPECIES	7563																OSBPL5 (ENSLLTG00000011651) #22	PSMG1 (ENSLLTG00000012702)
Lizard	MODERN SPECIES		SERGEF (ENSACAG00000028890)	TPH1 (ENSACAG00000000057) ##25	SAAL1 (ENSACAG00000000058)	HPS5 (ENSACAG00000000059)	GTF2H1 (ENSACAG00000000060)	ENSACAG00000000061	TSG101 (ENSACAG00000000062)	ENSACAG00000000063	ENSACAG00000000064	TMEM86A (ENSACAG00000000065)	ENSACAG00000043092	IGSF22 (ENSACAG00000000066)	PTPN5 (ENSACAG00000000067)	ENSACAG00000040931	ENSACAG00000000068 #21	OSBPL5 (ENSACAG00000000070) #22	ENSACAG00000000071	CARS1 (ENSACAG00000000073)	NAP1L4 (ENSACAG00000000074)	ENSACAG00000037028 #23	ENSACAG00000000076 #23	SLC22A18 (ENSACAG00000000077)	ENSACAG00000040789	KCNQ1 (ENSACAG00000028718)	TRPM5 (ENSACAG00000007756)	TSSC4 (ENSACAG00000002763)	CD81 (ENSACAG00000009937)	ASCL2 (ENSACAG00000009918)	ENSACAG00000039809	ENSACAG00000044875	TH (ENSACAG00000009753) #25
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000013383	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00500000044950	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Common wall lizard	MODERN SPECIES		KCNC1 (ENSPMRG00000005116)	SERGEF (ENSPMRG00000005122)	TPH1 (ENSPMRG00000005139) ##25	SAAL1 (ENSPMRG00000005195)	HPS5 (ENSPMRG00000005216)	GTF2H1 (ENSPMRG00000005288)	LDHA (ENSPMRG00000005300)	TSG101 (ENSPMRG00000005311)	ENSPMRG00000005321	SPTY2D1 (ENSPMRG00000005330)	C18orf21 (ENSPMRG00000005336)	TMEM86A (ENSPMRG00000005342)	IGSF22 (ENSPMRG00000005349)	PTPN5 (ENSPMRG00000005389)	PTPRJ (ENSPMRG00000005401) #21	OSBPL5 (ENSPMRG00000005419) #22	ENSPMRG00000005433	ENSPMRG00000005439	PSMG1 (ENSPMRG00000005447)	CARS1 (ENSPMRG00000005455)	NAP1L4 (ENSPMRG00000005472)	ENSPMRG00000005482 #23	ENSPMRG00000005487 #23	SLC22A18 (ENSPMRG00000005496)	CDKN1C (ENSPMRG00000005499)	KCNQ1 (ENSPMRG00000005509)	TRPM5 (ENSPMRG00000005535)	TSSC4 (ENSPMRG00000005548)	CD81 (ENSPMRG00000005553)	ENSPMRG00000005562	TSPAN32 (ENSPMRG00000005573)
Argentine black and white tegu	MODERN SPECIES	3	SERGEF (ENSSMRG00000014477)	TPH1 (ENSSMRG00000014476) ##25	SAAL1 (ENSSMRG00000014475)	HPS5 (ENSSMRG00000014207)	GTF2H1 (ENSSMRG00000014206)	LDHA (ENSSMRG00000014205)	TSG101 (ENSSMRG00000014204)	UEVLD (ENSSMRG00000014203)	SPTY2D1 (ENSSMRG00000014202)	ENSSMRG00000014201	TMEM86A (ENSSMRG00000014198)	IGSF22 (ENSSMRG00000014197)	ENSSMRG00000014196	PTPN5 (ENSSMRG00000014194)	PTPRJ (ENSSMRG00000014192) #21	OSBPL5 (ENSSMRG00000014191) #22	PSMG1 (ENSSMRG00000014190)	ENSSMRG00000014188	CARS1 (ENSSMRG00000014187)	NAP1L4 (ENSSMRG00000014185)	ENSSMRG00000014184 #23	ENSSMRG00000014183 #23	SLC22A18 (ENSSMRG00000014182)	CDKN1C (ENSSMRG00000014181)	KCNQ1 (ENSSMRG00000014179)	TRPM5 (ENSSMRG00000014178)	TSSC4 (ENSSMRG00000014177)	CD81 (ENSSMRG00000014176)	TSPAN32 (ENSSMRG00000014175)	ENSSMRG00000014174	TH (ENSSMRG00000014172) #25
tuatara	MODERN SPECIES	424												TMEM86A (ENSSPUG00000003647)	PTPN5 (ENSSPUG00000003636)	ENSSPUG00000003631	ENSSPUG00000003345 #21	OSBPL5 (ENSSPUG00000003246) #22	ENSSPUG00000003240	CARS1 (ENSSPUG00000003209)	NAP1L4 (ENSSPUG00000003180)	ENSSPUG00000003174 #23	SLC22A18 (ENSSPUG00000003103)	CDKN1C (ENSSPUG00000003090)	KCNQ1 (ENSSPUG00000003050)	ENSSPUG00000003038	TRPM5 (ENSSPUG00000002822)	TSSC4 (ENSSPUG00000002796)	CD81 (ENSSPUG00000002760)	TSPAN32 (ENSSPUG00000002748)	ENSSPUG00000002743	TH (ENSSPUG00000002721) #25	ENSSPUG00000002701
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Archosauria	ANCESTRAL SPECIES	5	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Aves	ANCESTRAL SPECIES	2	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Neognathae	ANCESTRAL SPECIES	4	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Golden eagle	MODERN SPECIES	7	ENSACCG00020012030	MYOD1 (ENSACCG00020012010)	KCNC1 (ENSACCG00020011992)	SERGEF (ENSACCG00020011956)	TPH1 (ENSACCG00020011925) ##25	SAAL1 (ENSACCG00020011891)	ENSACCG00020011849	HPS5 (ENSACCG00020011823)	GTF2H1 (ENSACCG00020011784)	LDHA (ENSACCG00020011744)	ENSACCG00020011654	SPTY2D1 (ENSACCG00020011558)	TMEM86A (ENSACCG00020011544)	PTPN5 (ENSACCG00020011520)	ENSACCG00020011450 #21	OSBPL5 (ENSACCG00020011408) #22	ENSACCG00020011396	CARS1 (ENSACCG00020011371)	NAP1L4 (ENSACCG00020011317)	PHLDA2 (ENSACCG00020011286) #23	SLC22A18 (ENSACCG00020011268)	ENSACCG00020011238	KCNQ1 (ENSACCG00020011214)	TRPM5 (ENSACCG00020011148)	TSSC4 (ENSACCG00020011127)	CD81 (ENSACCG00020011113)	TSPAN32 (ENSACCG00020011106)	ASCL2 (ENSACCG00020011369)	TH (ENSACCG00020011356) #25	ENSACCG00020011338	IGF2 (ENSACCG00020011332) #26
Kakapo	MODERN SPECIES	21	MYOD1 (ENSSHBG00005004057)	KCNC1 (ENSSHBG00005004052)	SERGEF (ENSSHBG00005004045)	TPH1 (ENSSHBG00005004036) ##25	SAAL1 (ENSSHBG00005004015)	ENSSHBG00005004000	HPS5 (ENSSHBG00005003984)	GTF2H1 (ENSSHBG00005003950)	LDHA (ENSSHBG00005003929)	TSG101 (ENSSHBG00005003912)	UEVLD (ENSSHBG00005003887)	SPTY2D1 (ENSSHBG00005003868)	TMEM86A (ENSSHBG00005003850)	PTPN5 (ENSSHBG00005003830)	ENSSHBG00005003781 #21	OSBPL5 (ENSSHBG00005003762) #22	ENSSHBG00005003742	CARS1 (ENSSHBG00005003699)	NAP1L4 (ENSSHBG00005003673)	PHLDA2 (ENSSHBG00005003660) #23	SLC22A18 (ENSSHBG00005003653)	ENSSHBG00005003643	KCNQ1 (ENSSHBG00005003587)	TRPM5 (ENSSHBG00005003544)	TSSC4 (ENSSHBG00005003525)	ENSSHBG00005003513	CD81 (ENSSHBG00005003501)	ENSSHBG00005003483	ASCL2 (ENSSHBG00005003465)	TH (ENSSHBG00005003446) #25	ENSSHBG00005003433
Passeriformes	ANCESTRAL SPECIES	5	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Great tit	MODERN SPECIES	25	ENSPMJG00000008624	MYOD1 (ENSPMJG00000008625)	KCNC1 (ENSPMJG00000008627)	SERGEF (ENSPMJG00000008648)	TPH1 (ENSPMJG00000008649) ##25	SAAL1 (ENSPMJG00000008652)	HPS5 (ENSPMJG00000008665)	GTF2H1 (ENSPMJG00000008670)	LDHA (ENSPMJG00000008676)	TSG101 (ENSPMJG00000008680)	ENSPMJG00000008681	SPTY2D1 (ENSPMJG00000008684)	TMEM86A (ENSPMJG00000008704)	PTPN5 (ENSPMJG00000008706)	ENSPMJG00000008719 #21	OSBPL5 (ENSPMJG00000009085) #22	ENSPMJG00000009118	CARS1 (ENSPMJG00000009119)	NAP1L4 (ENSPMJG00000009153)	PHLDA2 (ENSPMJG00000009169) #23	SLC22A18 (ENSPMJG00000009172)	KCNQ1 (ENSPMJG00000009231)	TRPM5 (ENSPMJG00000009294)	CD81 (ENSPMJG00000009311)	TSPAN32 (ENSPMJG00000009317)	ASCL2 (ENSPMJG00000009322)	TH (ENSPMJG00000009325) #25	ENSPMJG00000009329	IGF2 (ENSPMJG00000009333) #26	ENSPMJG00000009345	TNNT3 (ENSPMJG00000009347)
Passeriformes_d	ANCESTRAL SPECIES	5	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066.t	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Flycatcher	MODERN SPECIES	24	ENSFALG00000028324	MYOD1 (ENSFALG00000000758)	KCNC1 (ENSFALG00000000754)	SERGEF (ENSFALG00000011059)	TPH1 (ENSFALG00000011078) ##25	SAAL1 (ENSFALG00000011111)	ENSFALG00000024967	ENSFALG00000011119	HPS5 (ENSFALG00000011125)	GTF2H1 (ENSFALG00000011148)	LDHA (ENSFALG00000011162)	ENSFALG00000011218	SPTY2D1 (ENSFALG00000011262)	TMEM86A (ENSFALG00000011276)	PTPN5 (ENSFALG00000011286)	OSBPL5 (ENSFALG00000011338) #22	ENSFALG00000027690	ENSFALG00000026772	CARS1 (ENSFALG00000011418)	NAP1L4 (ENSFALG00000011431)	SLC22A18 (ENSFALG00000011440)	PHLDA2 (ENSFALG00000014445) #23	KCNQ1 (ENSFALG00000011451)	TRPM5 (ENSFALG00000011476)	TSSC4 (ENSFALG00000014454)	CD81 (ENSFALG00000027250)	TSPAN32 (ENSFALG00000027703)	TH (ENSFALG00000011544) #25	ENSFALG00000011579	IGF2 (ENSFALG00000011591) #26	ENSFALG00000028464
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066.t	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066.t	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Common canary	MODERN SPECIES	3	KCNC1 (ENSSCAG00000005066)	SERGEF (ENSSCAG00000005048)	TPH1 (ENSSCAG00000005038) ##25	SAAL1 (ENSSCAG00000005025)	ENSSCAG00000005016	HPS5 (ENSSCAG00000005001)	GTF2H1 (ENSSCAG00000004990)	LDHA (ENSSCAG00000004984)	ENSSCAG00000004978	TSG101 (ENSSCAG00000004960)	SPTY2D1 (ENSSCAG00000004949)	TMEM86A (ENSSCAG00000004939)	PTPN5 (ENSSCAG00000004927)	ENSSCAG00000004917	ENSSCAG00000004876 #21	OSBPL5 (ENSSCAG00000004823) #22	ENSSCAG00000004800	CARS1 (ENSSCAG00000004788)	NAP1L4 (ENSSCAG00000004764)	PHLDA2 (ENSSCAG00000004757) #23	SLC22A18 (ENSSCAG00000004753)	KCNQ1 (ENSSCAG00000004719)	TRPM5 (ENSSCAG00000004629)	TSSC4 (ENSSCAG00000004613)	CD81 (ENSSCAG00000004605)	ENSSCAG00000004599	TH (ENSSCAG00000004577) #25	ENSSCAG00000004573	IGF2 (ENSSCAG00000004566) #26	ENSSCAG00000004554	TNNT3 (ENSSCAG00000004469)
Zebra finch	MODERN SPECIES	27	MYOD1 (ENSTGUG00000008814)	KCNC1 (ENSTGUG00000008821)	SERGEF (ENSTGUG00000008830)	TPH1 (ENSTGUG00000008841) ##25	SAAL1 (ENSTGUG00000008863)	ENSTGUG00000025044	HPS5 (ENSTGUG00000008872)	ENSTGUG00000008904	LDHA (ENSTGUG00000008930)	TSG101 (ENSTGUG00000008935)	ENSTGUG00000008943	SPTY2D1 (ENSTGUG00000008968)	TMEM86A (ENSTGUG00000025382)	PTPN5 (ENSTGUG00000008983)	ENSTGUG00000009007 #21	OSBPL5 (ENSTGUG00000009038) #22	ENSTGUG00000023289	CARS1 (ENSTGUG00000009099)	NAP1L4 (ENSTGUG00000009146)	PHLDA2 (ENSTGUG00000020873) #23	SLC22A18 (ENSTGUG00000009164)	ENSTGUG00000024243	KCNQ1 (ENSTGUG00000009167)	TRPM5 (ENSTGUG00000009187)	CD81 (ENSTGUG00000009259)	TSSC4 (ENSTGUG00000009258)	TSPAN32 (ENSTGUG00000009287)	ASCL2 (ENSTGUG00000009283)	TH (ENSTGUG00000009295) #25	ENSTGUG00000009326	IGF2 (ENSTGUG00000009330) #26
Medium ground finch	MODERN SPECIES	140		SERGEF (ENSGFOG00000014296)	TPH1 (ENSGFOG00000014298) ##25	SAAL1 (ENSGFOG00000014301)	HPS5 (ENSGFOG00000014302)	GTF2H1 (ENSGFOG00000014308)	LDHA (ENSGFOG00000014313)	TSG101 (ENSGFOG00000014316)	ENSGFOG00000014319	UEVLD (ENSGFOG00000014324)	SPTY2D1 (ENSGFOG00000014327)	TMEM86A (ENSGFOG00000014331)	PTPN5 (ENSGFOG00000014334)	ENSGFOG00000014338	ENSGFOG00000014341 #21	OSBPL5 (ENSGFOG00000014344) #22	ENSGFOG00000014350	CARS1 (ENSGFOG00000014356)	NAP1L4 (ENSGFOG00000014365)	PHLDA2 (ENSGFOG00000014374) #23	SLC22A18 (ENSGFOG00000014376)	KCNQ1 (ENSGFOG00000014379)	TRPM5 (ENSGFOG00000014382)	TSSC4 (ENSGFOG00000014390)	CD81 (ENSGFOG00000014391)	TH (ENSGFOG00000014393) #25	ENSGFOG00000014395	IGF2 (ENSGFOG00000014397) #26	ENSGFOG00000014398	TNNT3 (ENSGFOG00000014400)
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Anatidae	ANCESTRAL SPECIES	9				ENSGT00960000189946	ENSGT00950000182885.A.a.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818.z	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT01030000238651	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Pink-footed goose	MODERN SPECIES	158																OSBPL5 (ENSABRG00000003400) #22	ENSABRG00000003216	CARS1 (ENSABRG00000001861)	NAP1L4 (ENSABRG00000000885)	PHLDA2 (ENSABRG00000000856) #23	SLC22A18 (ENSABRG00000000807)	ENSABRG00000000783	KCNQ1 (ENSABRG00000006097)	TRPM5 (ENSABRG00000005984)	TSSC4 (ENSABRG00000005953)	CD81 (ENSABRG00000005937)	ENSABRG00000005921	ASCL2 (ENSABRG00000005915)	TH (ENSABRG00000005882) #25	ENSABRG00000005876	IGF2 (ENSABRG00000005873) #26
Duck	MODERN SPECIES	23	ENSAPLG00000000744	ENSAPLG00000000745	OR4Q3 (ENSAPLG00000004398)	ENSAPLG00000004400	ENSAPLG00000004421 ##25	SAAL1 (ENSAPLG00000004998)	ENSAPLG00000005304	ENSAPLG00000005319	GTF2H1 (ENSAPLG00000005620)	LDHA (ENSAPLG00000005918)	ENSAPLG00000006338	ENSAPLG00000026425	SPTY2D1 (ENSAPLG00000006866)	TMEM86A (ENSAPLG00000019960)	PTPN5 (ENSAPLG00000007215)	OSBPL5 (ENSAPLG00000002498) #22	ENSAPLG00000002387	CARS1 (ENSAPLG00000015062)	NAP1L4 (ENSAPLG00000014701)	PHLDA2 (ENSAPLG00000014648) #23	SLC22A18 (ENSAPLG00000014592)	ENSAPLG00000024161	KCNQ1 (ENSAPLG00000014530)	ENSAPLG00000024766	TRPM5 (ENSAPLG00000014148)	ENSAPLG00000023032	TSSC4 (ENSAPLG00000011525)	CD81 (ENSAPLG00000023901)	TH (ENSAPLG00000013071) #25	ENSAPLG00000013068	IGF2 (ENSAPLG00000028329) #26
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333.l	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Japanese quail	MODERN SPECIES	23	ENSCJPG00005010796	KCNC1 (ENSCJPG00005010792)	SERGEF (ENSCJPG00005010791)	TPH1 (ENSCJPG00005010780) ##25	SAAL1 (ENSCJPG00005010779)	ENSCJPG00005010778	HPS5 (ENSCJPG00005010777)	GTF2H1 (ENSCJPG00005010775)	LDHA (ENSCJPG00005010774)	TSG101 (ENSCJPG00005010773)	ENSCJPG00005010772	SPTY2D1 (ENSCJPG00005010771)	TMEM86A (ENSCJPG00005010770)	PTPN5 (ENSCJPG00005010769)	ENSCJPG00005010766 #21	OSBPL5 (ENSCJPG00005010764) #22	ENSCJPG00005010762	CARS1 (ENSCJPG00005010761)	NAP1L4 (ENSCJPG00005010758)	ENSCJPG00005010757 #23	ENSCJPG00005010756	ENSCJPG00005010755	MYOD1 (ENSCJPG00005010754)	ENSCJPG00005010753	OTOG (ENSCJPG00005010752)	USH1C (ENSCJPG00005010751)	ABCC8 (ENSCJPG00005006650)	KCNJ11 (ENSCJPG00005006618)	NUCB2 (ENSCJPG00005006615)	PIK3C2A (ENSCJPG00005006394)	RPS13 (ENSCJPG00005006391)
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00920000149457	ENSGT00950000182959.b.b	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333.l	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT01030000238651	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Turkey	DUPLICATION
Turkey	MODERN SPECIES	25	ENSMGAG00000007939	ENSMGAG00000007908 #25	ENSMGAG00000022591	ENSMGAG00000007900	ENSMGAG00000007871	ENSMGAG00000019751	ENSMGAG00000020925	ENSMGAG00000007819	ENSMGAG00000007786	ENSMGAG00000018101	ENSMGAG00000020602 #23	ENSMGAG00000007748	ENSMGAG00000007679	ENSMGAG00000020507	ENSMGAG00000020301	ENSMGAG00000019016 #22	ENSMGAG00000007614 #22	ENSMGAG00000007545 #21	ENSMGAG00000007528	ENSMGAG00000007515	ENSMGAG00000007501	ENSMGAG00000007465	ENSMGAG00000021944	ENSMGAG00000020292	ENSMGAG00000007372	ENSMGAG00000007354	ENSMGAG00000021100	ENSMGAG00000007279	ENSMGAG00000022734	ENSMGAG00000017600	ENSMGAG00000007273
Turkey	MODERN SPECIES	25	ENSMGAG00000007908 #25	ENSMGAG00000022591	ENSMGAG00000007900	ENSMGAG00000007871	ENSMGAG00000019751	ENSMGAG00000020925	ENSMGAG00000007819	ENSMGAG00000007786	ENSMGAG00000018101	ENSMGAG00000020602 #23	ENSMGAG00000007748	ENSMGAG00000007679	ENSMGAG00000020507	ENSMGAG00000020301	ENSMGAG00000019016 #22	ENSMGAG00000007614 #22	ENSMGAG00000007545 #21	ENSMGAG00000007528	ENSMGAG00000007515	ENSMGAG00000007501	ENSMGAG00000007465	ENSMGAG00000021944	ENSMGAG00000020292	ENSMGAG00000007372	ENSMGAG00000007354	ENSMGAG00000021100	ENSMGAG00000007279	ENSMGAG00000022734	ENSMGAG00000017600	ENSMGAG00000007273	ENSMGAG00000007226 ##25
Chicken	MODERN SPECIES	34	FTL (ENSGALG00010024360)	MYOD1 (ENSGALG00010024369)	KCNC1 (ENSGALG00010024401)	SERGEF (ENSGALG00010024423)	TPH1 (ENSGALG00010026924) ##25	SAAL1 (ENSGALG00010024428)	SAA (ENSGALG00010024441)	HPS5 (ENSGALG00010024454)	GTF2H1 (ENSGALG00010024469)	LDHA (ENSGALG00010024472)	UEVLD (ENSGALG00010024496)	SPTY2D1 (ENSGALG00010024513)	TMEM86A (ENSGALG00010024532)	PTPN5 (ENSGALG00010024540)	PTPRJ (ENSGALG00010024013) #21	OSBPL5 (ENSGALG00010024035) #22	ENSGALG00010024052	CARS (ENSGALG00010024081)	NAP1L4 (ENSGALG00010024112)	PHLDA2 (ENSGALG00010024128) #23	SLC22A18 (ENSGALG00010024139)	CDKN1C (ENSGALG00010024146)	KCNQ1 (ENSGALG00010024153)	ENSGALG00010024161	TSSC4 (ENSGALG00010024188)	TRPM5 (ENSGALG00010024211)	CD81 (ENSGALG00010024552)	TSPAN32 (ENSGALG00010024557)	ENSGALG00010024562	ASCL2 (ENSGALG00010024569)	TH (ENSGALG00010026940) #25
African ostrich	MODERN SPECIES	586											ENSSCUG00000013210	SPTY2D1 (ENSSCUG00000013207)	TMEM86A (ENSSCUG00000013206)	PTPN5 (ENSSCUG00000013195)	PTPRJ (ENSSCUG00000013185) #21	OSBPL5 (ENSSCUG00000013176) #22	ENSSCUG00000013172	CARS1 (ENSSCUG00000013169)	NAP1L4 (ENSSCUG00000013164)	PHLDA2 (ENSSCUG00000013161) #23	SLC22A18 (ENSSCUG00000013160)	KCNQ1 (ENSSCUG00000013147)	TRPM5 (ENSSCUG00000013143)	TSSC4 (ENSSCUG00000013141)	CD81 (ENSSCUG00000013137)	TSPAN32 (ENSSCUG00000013133)	TH (ENSSCUG00000013131) #25	ENSSCUG00000013130	ENSSCUG00000013128	TNNT3 (ENSSCUG00000013127)	PRR33 (ENSSCUG00000013126)
Australian saltwater crocodile	MODERN SPECIES	64	TPH1 (ENSCPRG00005000260) ##25	SAAL1 (ENSCPRG00005000231)	ENSCPRG00005000214	ENSCPRG00005017256	HPS5 (ENSCPRG00005017251)	GTF2H1 (ENSCPRG00005017249)	LDHA (ENSCPRG00005017245)	ENSCPRG00005017243	TSG101 (ENSCPRG00005017234)	SPTY2D1 (ENSCPRG00005017230)	TMEM86A (ENSCPRG00005017229)	IGSF22 (ENSCPRG00005017227)	PTPN5 (ENSCPRG00005017224)	PTPRJ (ENSCPRG00005017215) #21	ENSCPRG00005017213	OSBPL5 (ENSCPRG00005017206) #22	ENSCPRG00005017195	CARS1 (ENSCPRG00005017107)	NAP1L4 (ENSCPRG00005017058)	PHLDA2 (ENSCPRG00005017053) #23	SLC22A18 (ENSCPRG00005017050)	KCNQ1 (ENSCPRG00005017043)	TRPM5 (ENSCPRG00005017030)	TSSC4 (ENSCPRG00005017025)	CD81 (ENSCPRG00005017019)	TH (ENSCPRG00005017012) #25	ENSCPRG00005017011	IGF2 (ENSCPRG00005017008) #26	ENSCPRG00005017003	TNNT3 (ENSCPRG00005016999)	LSP1 (ENSCPRG00005016994)
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000165300	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b.fb.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000165300	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Emydidae	ANCESTRAL SPECIES	10	ENSGT00940000156912	ENSGT00940000160684	ENSGT00950000182885.A.a ##25	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b.fb.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000165300	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
painted turtle	MODERN SPECIES	2418			ENSCPBG00000007002	ENSCPBG00000007009	ENSCPBG00000007015	HPS5 (ENSCPBG00000007026)	GTF2H1 (ENSCPBG00000007052)	LDHA (ENSCPBG00000007063)	TSG101 (ENSCPBG00000007076)	ENSCPBG00000007091	SPTY2D1 (ENSCPBG00000007099)	TMEM86A (ENSCPBG00000007109)	IGSF22 (ENSCPBG00000007119)	PTPN5 (ENSCPBG00000007151)	PTPRJ (ENSCPBG00000007198) #21	OSBPL5 (ENSCPBG00000007282) #22	ENSCPBG00000007311	ENSCPBG00000007313	CARS1 (ENSCPBG00000007331)	ENSCPBG00000007352	ENSCPBG00000007357	ENSCPBG00000007364	TH (ENSCPBG00000007371) #25	ENSCPBG00000007381	IGF2 (ENSCPBG00000007386) #26	ENSCPBG00000007389	TNNT3 (ENSCPBG00000007394)	LSP1 (ENSCPBG00000007407)	PRR33 (ENSCPBG00000007419)	TNNI2 (ENSCPBG00000007422)	ENSCPBG00000007429
Three-toed box turtle	MODERN SPECIES	346	ENSTMTG00000022987	MYOD1 (ENSTMTG00000022988)	KCNC1 (ENSTMTG00000022989)	SERGEF (ENSTMTG00000022991)	TPH1 (ENSTMTG00000022992) ##25	SAAL1 (ENSTMTG00000022994)	HPS5 (ENSTMTG00000023014)	GTF2H1 (ENSTMTG00000023035)	LDHA (ENSTMTG00000023037)	TSG101 (ENSTMTG00000023038)	ENSTMTG00000023039	SPTY2D1 (ENSTMTG00000023041)	TMEM86A (ENSTMTG00000023043)	IGSF22 (ENSTMTG00000023046)	PTPN5 (ENSTMTG00000003391)	OSBPL5 (ENSTMTG00000003425) #22	ENSTMTG00000003489	CARS1 (ENSTMTG00000003616)	NAP1L4 (ENSTMTG00000004392)	PHLDA2 (ENSTMTG00000004570) #23	SLC22A18 (ENSTMTG00000004585)
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00390000004737.b.b	ENSGT00390000004737.b.a.o.a.a.a.b.gb	ENSGT00390000004737.b.a.o.a.a.a.b.fb.b.b	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000153201.j	ENSGT00940000153903.a.a	ENSGT00940000164122	ENSGT01000000216403	ENSGT00940000154133.A	ENSGT00390000007101.d.b	ENSGT00940000160123	ENSGT00940000159916	ENSGT00940000156870 #21	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000165300	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Goode s thornscrub tortoise	MODERN SPECIES	18	SAAL1 (ENSGEVG00005011345)	ENSGEVG00005011365	ENSGEVG00005011403	ENSGEVG00005011487	ENSGEVG00005011723	ENSGEVG00005011786	GTF2H1 (ENSGEVG00005011817)	LDHA (ENSGEVG00005011863)	TSG101 (ENSGEVG00005011900)	ENSGEVG00005011961	TMEM86A (ENSGEVG00005012053)	IGSF22 (ENSGEVG00005012213)	PTPN5 (ENSGEVG00005012381)	PTPRJ (ENSGEVG00005012489) #21	ENSGEVG00005012930	ENSGEVG00005012985 #22	ENSGEVG00005013063	CARS1 (ENSGEVG00005013121)	NAP1L4 (ENSGEVG00005013287)	SLC22A18 (ENSGEVG00005013388)	ENSGEVG00005013530	CDKN1C (ENSGEVG00005013551)	KCNQ1 (ENSGEVG00005013596)	TRPM5 (ENSGEVG00005013933)	TSSC4 (ENSGEVG00005014439)	CD81 (ENSGEVG00005014453)	TSPAN32 (ENSGEVG00005014491)	ENSGEVG00005014529	TH (ENSGEVG00005014592) #25	ENSGEVG00005014702	IGF2 (ENSGEVG00005014733) #26
Abingdon island giant tortoise	MODERN SPECIES	2519					HPS5 (ENSCABG00000005641)	GTF2H1 (ENSCABG00000006106)	LDHA (ENSCABG00000006154)	TSG101 (ENSCABG00000006156)	ENSCABG00000006159	ENSCABG00000006161	SPTY2D1 (ENSCABG00000006164)	TMEM86A (ENSCABG00000006168)	PTPN5 (ENSCABG00000006181)	PTPRJ (ENSCABG00000006183) #21	ENSCABG00000006186	ENSCABG00000006187 #22	CARS1 (ENSCABG00000006190)
Chinese turtle	MODERN SPECIES	2023																OSBPL5 (ENSPSIG00000014385) #22	ENSPSIG00000005693	CARS1 (ENSPSIG00000005881)	NAP1L4 (ENSPSIG00000007686)	ENSPSIG00000008660	ENSPSIG00000008668	CDKN1C (ENSPSIG00000008715)	KCNQ1 (ENSPSIG00000008721)	TRPM5 (ENSPSIG00000009524)	TSSC4 (ENSPSIG00000001456)	CD81 (ENSPSIG00000011497)	ENSPSIG00000001461	ENSPSIG00000011886	TH (ENSPSIG00000012029) #25	ENSPSIG00000012519	IGF2 (ENSPSIG00000012570) #26
Mammalia	ANCESTRAL SPECIES	66															ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Theria	ANCESTRAL SPECIES	8	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327	ENSGT00940000160745 #26
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.a.a	ENSGT01030000234639.A.b.a.b.a.a.b.g.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000011381.e	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.a.a	ENSGT01030000234639.A.b.a.b.a.a.b.g.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000011381.e	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Diprotodontia	ANCESTRAL SPECIES	27	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.a.a	ENSGT01030000234639.A.b.a.b.a.a.b.g.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000011381.e	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00940000164327
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152.m	ENSGT01030000234639.A.b.a.b.a.a.b.h	ENSGT01030000234639.A.b.a.b.a.a.b.g.b.f	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000011381.e	ENSGT01050000244855.A.a.b.b.a	ENSGT00930000151070.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25
Common wonbat	MODERN SPECIES	1027									ENSVURG00010012864	ENSVURG00010012847	ENSVURG00010012840	ENSVURG00010012839	ENSVURG00010012832	ENSVURG00010012830	ENSVURG00010012828	OSBPL5 (ENSVURG00010012808) #22	ENSVURG00010012792	ENSVURG00010012784	ENSVURG00010012779	ENSVURG00010012772	CARS1 (ENSVURG00010012742)	NAP1L4 (ENSVURG00010012702)	PHLDA2 (ENSVURG00010012698) #23	SLC22A18 (ENSVURG00010012679)	ENSVURG00010012670	KCNQ1 (ENSVURG00010012160)	TRPM5 (ENSVURG00010012104)	ENSVURG00010012086	ENSVURG00010012060	ENSVURG00010012052	ASCL2 (ENSVURG00010012047)
koala	MODERN SPECIES	209	ENSPCIG00000009028	ENSPCIG00000009025	PPFIA1 (ENSPCIG00000009009)	CTTN (ENSPCIG00000008932)	SHANK2 (ENSPCIG00000008921)	ENSPCIG00000035287	DHCR7 (ENSPCIG00000019135)	ENSPCIG00000019137	ENSPCIG00000019138	ENSPCIG00000018831	ENSPCIG00000018821	ENSPCIG00000033218	ENSPCIG00000032536	ENSPCIG00000031868	ENSPCIG00000012856	OSBPL5 (ENSPCIG00000030325) #22	ENSPCIG00000030324	ENSPCIG00000030323	ENSPCIG00000030317	CARS1 (ENSPCIG00000030315)	NAP1L4 (ENSPCIG00000030311)	ENSPCIG00000030309 #23	ENSPCIG00000030307	ENSPCIG00000030306	KCNQ1 (ENSPCIG00000034001)	TRPM5 (ENSPCIG00000011672)	CD81 (ENSPCIG00000011719)	ENSPCIG00000031824	ENSPCIG00000024491	TH (ENSPCIG00000013052) #25	ENSPCIG00000013049
Wallaby	MODERN SPECIES	2370																OSBPL5 (ENSMEUG00000001930) #22
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000007467	ENSSHAG00000007247	ENSSHAG00000006442	ENSSHAG00000022758	ENSSHAG00000005157	ENSSHAG00000031101	ENSSHAG00000004350	ENSSHAG00000025558	ENSSHAG00000002355	ENSSHAG00000000964	ENSSHAG00000030513	ENSSHAG00000023560	ENSSHAG00000031724	ENSSHAG00000020810	ENSSHAG00000002233	OSBPL5 (ENSSHAG00000004780) #22	ENSSHAG00000025139	ENSSHAG00000020674	ENSSHAG00000023798	ENSSHAG00000025957	CARS1 (ENSSHAG00000003221)	NAP1L4 (ENSSHAG00000001597)	ENSSHAG00000004926 #23	SLC22A18 (ENSSHAG00000003880)	ENSSHAG00000020798	KCNQ1 (ENSSHAG00000001731)	TRPM5 (ENSSHAG00000003498)	ENSSHAG00000021290	CD81 (ENSSHAG00000030839)	ENSSHAG00000024504	ENSSHAG00000024654
Opossum	MODERN SPECIES	4	GAL (ENSMODG00000012764)	ENSMODG00000007394	NADSYN1 (ENSMODG00000007384)	ENSMODG00000007370	ENSMODG00000007359	ENSMODG00000047067	ENSMODG00000007344	ENSMODG00000007340	ENSMODG00000024123	ENSMODG00000007244	ENSMODG00000047236	ENSMODG00000036774	ENSMODG00000024125	ENSMODG00000024127	MRGPRE (ENSMODG00000007185)	OSBPL5 (ENSMODG00000007169) #22	ENSMODG00000007115	CARS1 (ENSMODG00000007058)	NAP1L4 (ENSMODG00000007012)	ENSMODG00000029435	ENSMODG00000043944	ENSMODG00000041851	ENSMODG00000008826	ENSMODG00000008821	MARK2 (ENSMODG00000008796)	SPINDOC (ENSMODG00000025552)	ENSMODG00000008519	ENSMODG00000008485	ENSMODG00000037909	ENSMODG00000028381	ENSMODG00000008374
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT01070000254034	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Suina	DUPLICATION
Suina	ANCESTRAL SPECIES	14	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000159535.c #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688	ENSGT00940000160745 #26
Pig	MODERN SPECIES	10	TPCN2 (ENSSSCG00000012875)	CCND1 (ENSSSCG00000037900)	LTO1 (ENSSSCG00000012874)	FGF19 (ENSSSCG00000012871)	FGF4 (ENSSSCG00000012870)	FGF3 (ENSSSCG00000061049)	ANO1 (ENSSSCG00000024158)	FADD (ENSSSCG00000054981)	PPFIA1 (ENSSSCG00000037451)	CTTN (ENSSSCG00000031769)	SHANK2 (ENSSSCG00000033043)	ENSSSCG00000062960	ENSSSCG00000049374	DHCR7 (ENSSSCG00000021181)	NADSYN1 (ENSSSCG00000012859)	OSBPL5 (ENSSSCG00000012862) #22	CARS1 (ENSSSCG00000012857)	NAP1L4 (ENSSSCG00000012856)	PHLDA2 (ENSSSCG00000021597) #23	SLC22A18 (ENSSSCG00000012855)	CDKN1C (ENSSSCG00000040461)	KCNQ1 (ENSSSCG00000039556)	TRPM5 (ENSSSCG00000039644)	TSSC4 (ENSSSCG00000036015)	CD81 (ENSSSCG00000039243)	ENSSSCG00000033880	ASCL2 (ENSSSCG00000033507)	TH (ENSSSCG00000039767) #25	INS (ENSSSCG00000033740)	ENSSSCG00000035293 #26	ENSSSCG00000038364
Chacoan peccary	MODERN SPECIES	923															ENSCWAG00000020203 #22	ENSCWAG00000020029 #22	CARS1 (ENSCWAG00000019972)	NAP1L4 (ENSCWAG00000019926)	PHLDA2 (ENSCWAG00000019918) #23
Suina	ANCESTRAL SPECIES																	ENSGT00940000159535.d #22
Chacoan peccary	MODERN SPECIES	923												PHLDA2 (ENSCWAG00000019918) #23	NAP1L4 (ENSCWAG00000019926)	CARS1 (ENSCWAG00000019972)	ENSCWAG00000020029 #22	ENSCWAG00000020203 #22
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426.d	ENSGT00390000009426.c.a.a.a	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426.d	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426.d	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426.d	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426.c.a.a.a	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769	ENSGT00940000167688
Narwhal	MODERN SPECIES	314	MRGPRF (ENSMMNG00015021269)	TPCN2 (ENSMMNG00015021380)	CCND1 (ENSMMNG00015021479)	ENSMMNG00015021499	FGF19 (ENSMMNG00015021518)	FGF4 (ENSMMNG00015021528)	ENSMMNG00015021536	ANO1 (ENSMMNG00015021557)	FADD (ENSMMNG00015021617)	PPFIA1 (ENSMMNG00015016039)	CTTN (ENSMMNG00015016600)	SHANK2 (ENSMMNG00015016892)	DHCR7 (ENSMMNG00015017225)	NADSYN1 (ENSMMNG00015017289)	MRGPRG (ENSMMNG00015017407)	OSBPL5 (ENSMMNG00015017448) #22	CARS1 (ENSMMNG00015017665)	NAP1L4 (ENSMMNG00015017808)	PHLDA2 (ENSMMNG00015017908) #23	SLC22A18 (ENSMMNG00015017963)	CDKN1C (ENSMMNG00015018063)	KCNQ1 (ENSMMNG00015018106)	TSSC4 (ENSMMNG00015018514)	CD81 (ENSMMNG00015018532)	ENSMMNG00015018641	ASCL2 (ENSMMNG00015018666)	TH (ENSMMNG00015018728) #25	INS (ENSMMNG00015018959)	ENSMMNG00015018992	ENSMMNG00015019002	ENSMMNG00015019033 #26
Beluga whale	MODERN SPECIES	7	MRGPRF (ENSDLEG00000006538)	TPCN2 (ENSDLEG00000006495)	CCND1 (ENSDLEG00000006485)	ENSDLEG00000006473	ENSDLEG00000006464	FGF4 (ENSDLEG00000006458)	FGF3 (ENSDLEG00000006451)	ANO1 (ENSDLEG00000006391)	ENSDLEG00000006384	PPFIA1 (ENSDLEG00000006322)	CTTN (ENSDLEG00000006293)	SHANK2 (ENSDLEG00000006237)	DHCR7 (ENSDLEG00000006218)	NADSYN1 (ENSDLEG00000006200)	MRGPRG (ENSDLEG00000006188)	OSBPL5 (ENSDLEG00000006170) #22	ENSDLEG00000006166	CARS1 (ENSDLEG00000006156)	NAP1L4 (ENSDLEG00000006119)	PHLDA2 (ENSDLEG00000006108) #23	SLC22A18 (ENSDLEG00000006083)	CDKN1C (ENSDLEG00000006073)	KCNQ1 (ENSDLEG00000006029)	ENSDLEG00000006016	CD81 (ENSDLEG00000006001)	TSPAN32 (ENSDLEG00000005978)	ASCL2 (ENSDLEG00000005977)	TH (ENSDLEG00000005963) #25	INS (ENSDLEG00000005954)	ENSDLEG00000005949	ENSDLEG00000005941
Vaquita	MODERN SPECIES	19	MRGPRF (ENSPSNG00000016200)	TPCN2 (ENSPSNG00000016263)	CCND1 (ENSPSNG00000016389)	ENSPSNG00000016465	FGF19 (ENSPSNG00000016539)	FGF4 (ENSPSNG00000016594)	ENSPSNG00000016648	ANO1 (ENSPSNG00000016772)	FADD (ENSPSNG00000016987)	PPFIA1 (ENSPSNG00000017107)	CTTN (ENSPSNG00000017766)	ENSPSNG00000017888	ENSPSNG00000018400	DHCR7 (ENSPSNG00000018441)	NADSYN1 (ENSPSNG00000018498)	OSBPL5 (ENSPSNG00000018671) #22	CARS1 (ENSPSNG00000018889)	NAP1L4 (ENSPSNG00000019014)	PHLDA2 (ENSPSNG00000004151) #23	ENSPSNG00000004172	CDKN1C (ENSPSNG00000004197)	KCNQ1 (ENSPSNG00000004226)	ENSPSNG00000004266	TSSC4 (ENSPSNG00000004290)	CD81 (ENSPSNG00000004314)	ENSPSNG00000004364	ASCL2 (ENSPSNG00000004419)	TH (ENSPSNG00000004465) #25	INS (ENSPSNG00000004563)	ENSPSNG00000004577	ENSPSNG00000004587
Dolphin	MODERN SPECIES	2296																OSBPL5 (ENSTTRG00000007280) #22	CARS1 (ENSTTRG00000007278)	ENSTTRG00000007277
Sperm whale	MODERN SPECIES	9	MRPL21 (ENSPCTG00005012277)	CCND1 (ENSPCTG00005012304)	LTO1 (ENSPCTG00005012359)	FGF19 (ENSPCTG00005012534)	FGF4 (ENSPCTG00005012579)	FGF3 (ENSPCTG00005012631)	ANO1 (ENSPCTG00005012731)	ENSPCTG00005012992	ENSPCTG00005013014	PPFIA1 (ENSPCTG00005013091)	CTTN (ENSPCTG00005013533)	SHANK2 (ENSPCTG00005014075)	DHCR7 (ENSPCTG00005015137)	NADSYN1 (ENSPCTG00005015196)	MRGPRG (ENSPCTG00005015332)	OSBPL5 (ENSPCTG00005015374) #22	ENSPCTG00005015621	CARS (ENSPCTG00005015659)	NAP1L4 (ENSPCTG00005016012)	PHLDA2 (ENSPCTG00005016100) #23	SLC22A18 (ENSPCTG00005016130)	ENSPCTG00005016364	ENSPCTG00005016452	KCNQ1 (ENSPCTG00005016511)	TSSC4 (ENSPCTG00005017755)	CD81 (ENSPCTG00005007897)	ENSPCTG00005007939	ASCL2 (ENSPCTG00005008040)	TH (ENSPCTG00005008078) #25	INS (ENSPCTG00005008308)	ENSPCTG00005008329
Blue whale	MODERN SPECIES	19	IGHMBP2 (ENSBMSG00010005154)	MRGPRF (ENSBMSG00010005176)	TPCN2 (ENSBMSG00010005216)	CCND1 (ENSBMSG00010005276)	ENSBMSG00010005297	FGF19 (ENSBMSG00010005311)	FGF4 (ENSBMSG00010005321)	FGF3 (ENSBMSG00010005331)	ANO1 (ENSBMSG00010005353)	FADD (ENSBMSG00010005386)	PPFIA1 (ENSBMSG00010005441)	CTTN (ENSBMSG00010005521)	SHANK2 (ENSBMSG00010005601)	DHCR7 (ENSBMSG00010005765)	NADSYN1 (ENSBMSG00010005789)	OSBPL5 (ENSBMSG00010005841) #22	ENSBMSG00010005900	CARS1 (ENSBMSG00010006110)	NAP1L4 (ENSBMSG00010006393)	ENSBMSG00010006422	PHLDA2 (ENSBMSG00010006426) #23	SLC22A18 (ENSBMSG00010006448)	CDKN1C (ENSBMSG00010006481)	KCNQ1 (ENSBMSG00010006590)	ENSBMSG00010006642	TSSC4 (ENSBMSG00010006656)	CD81 (ENSBMSG00010006672)	ENSBMSG00010006716	ASCL2 (ENSBMSG00010006774)	TH (ENSBMSG00010006787) #25	INS (ENSBMSG00010006810)
Pecora	ANCESTRAL SPECIES	13	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Percora_a	ANCESTRAL SPECIES	16	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b.b.b	ENSGT00930000151070.d.b.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Bos	ANCESTRAL SPECIES	11	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Cow	MODERN SPECIES	21	LTO1 (ENSBTAG00000011898)	CCND1 (ENSBTAG00000017514)	FGF19 (ENSBTAG00000017285)	FGF4 (ENSBTAG00000012563)	FGF3 (ENSBTAG00000008623)	ANO1 (ENSBTAG00000009997)	FADD (ENSBTAG00000018274)	ENSBTAG00000053788	PPFIA1 (ENSBTAG00000022188)	CTTN (ENSBTAG00000006071)	SHANK2 (ENSBTAG00000003171)	ACTE1 (ENSBTAG00000004212)	DHCR7 (ENSBTAG00000016465)	NADSYN1 (ENSBTAG00000016470)	MRGPRG (ENSBTAG00000031271)	OSBPL5 (ENSBTAG00000001077) #22	ENSBTAG00000039129	CARS1 (ENSBTAG00000010777)	ENSBTAG00000048649	NAP1L4 (ENSBTAG00000022160)	PHLDA2 (ENSBTAG00000031194) #23	SLC22A18 (ENSBTAG00000012742)	CDKN1C (ENSBTAG00000031184)	KCNQ1 (ENSBTAG00000010986)	TRPM5 (ENSBTAG00000046662)	TSSC4 (ENSBTAG00000047793)	CD81 (ENSBTAG00000047495)	TSPAN32 (ENSBTAG00000002702)	ASCL2 (ENSBTAG00000026769)	TH (ENSBTAG00000026768) #25	INS (ENSBTAG00000013003)
Hybrid Bos Indicus	MODERN SPECIES	21	CCND1 (ENSBIXG00005003878)	LTO1 (ENSBIXG00005022702)	FGF19 (ENSBIXG00005022715)	FGF4 (ENSBIXG00005022740)	FGF3 (ENSBIXG00005003897)	ANO1 (ENSBIXG00005022912)	FADD (ENSBIXG00005022985)	ENSBIXG00005023006	PPFIA1 (ENSBIXG00005003994)	CTTN (ENSBIXG00005023643)	SHANK2 (ENSBIXG00005004100)	ENSBIXG00005023997	DHCR7 (ENSBIXG00005024034)	NADSYN1 (ENSBIXG00005024203)	MRGPRG (ENSBIXG00005024242)	OSBPL5 (ENSBIXG00005024555) #22	ENSBIXG00005024606	ENSBIXG00005002577	CARS1 (ENSBIXG00005024753)	NAP1L4 (ENSBIXG00005024918)	ENSBIXG00005024991	ENSBIXG00005025052	ENSBIXG00005025103	KCNQ1 (ENSBIXG00005004279)	TRPM5 (ENSBIXG00005025223)	TSSC4 (ENSBIXG00005004292)	CD81 (ENSBIXG00005025283)	ENSBIXG00005004304	ASCL2 (ENSBIXG00005025321)	TH (ENSBIXG00005025424) #25	INS (ENSBIXG00005025465)
Bos_a	ANCESTRAL SPECIES	34	ENSGT00940000157816	ENSGT00390000009426	ENSGT00990000205605	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00980000199390
Wild yak	MODERN SPECIES	1654																OSBPL5 (ENSBMUG00000024074) #22	ENSBMUG00000024102	CARS1 (ENSBMUG00000024133)	NAP1L4 (ENSBMUG00000024167)	ENSBMUG00000024176 #23	SLC22A18 (ENSBMUG00000024195)	KCNQ1 (ENSBMUG00000024235)	TRPM5 (ENSBMUG00000024289)	TSSC4 (ENSBMUG00000024298)	CD81 (ENSBMUG00000024318)	ENSBMUG00000024328
American bison	MODERN SPECIES	3011	TPCN2 (ENSBBBG00000012427)	ENSBBBG00000002380	ENSBBBG00000002382	LTO1 (ENSBBBG00000012464)	FGF19 (ENSBBBG00000012472)	FGF4 (ENSBBBG00000012474)	ANO1 (ENSBBBG00000012506)	FADD (ENSBBBG00000012511)	ENSBBBG00000012521	PPFIA1 (ENSBBBG00000012561)	CTTN (ENSBBBG00000002407)	SHANK2 (ENSBBBG00000012602)	DHCR7 (ENSBBBG00000012621)	NADSYN1 (ENSBBBG00000006985)	MRGPRG (ENSBBBG00000012662)	OSBPL5 (ENSBBBG00000002460) #22	ENSBBBG00000012752	NAP1L4 (ENSBBBG00000001798)	ENSBBBG00000012767	ENSBBBG00000012771	KCNQ1 (ENSBBBG00000012798)	ENSBBBG00000002482	TOLLIP (ENSBBBG00000012806)	ENSBBBG00000008146	ENSBBBG00000001789	ENSBBBG00000001787	DUSP8 (ENSBBBG00000012818)	KRTAP5-7 (ENSBBBG00000001772)	ENSBBBG00000012831	ENSBBBG00000002497
Caprinae	ANCESTRAL SPECIES	20	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00960000191094	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b.b.b	ENSGT00390000006347.a.k	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Goat	MODERN SPECIES	21	TPCN2 (ENSCHIG00000024724)	CCND1 (ENSCHIG00000010534)	LTO1 (ENSCHIG00000016576)	FGF19 (ENSCHIG00000012980)	FGF4 (ENSCHIG00000010447)	FGF3 (ENSCHIG00000001606)	ANO1 (ENSCHIG00000025110)	FADD (ENSCHIG00000008257)	ENSCHIG00000020155	PPFIA1 (ENSCHIG00000006687)	CTTN (ENSCHIG00000026835)	SHANK2 (ENSCHIG00000023742)	ENSCHIG00000020525	DHCR7 (ENSCHIG00000014907)	NADSYN1 (ENSCHIG00000007275)	OSBPL5 (ENSCHIG00000024291) #22	ENSCHIG00000016294	ENSCHIG00000023289	NAP1L4 (ENSCHIG00000016820)	PHLDA2 (ENSCHIG00000011165) #23	SLC22A18 (ENSCHIG00000017098)	CDKN1C (ENSCHIG00000012528)	KCNQ1 (ENSCHIG00000020793)	TRPM5 (ENSCHIG00000002319)	TSSC4 (ENSCHIG00000011835)	CD81 (ENSCHIG00000009589)	ENSCHIG00000015802	ASCL2 (ENSCHIG00000003965)	TH (ENSCHIG00000026162) #25	INS (ENSCHIG00000011044)	IGF2 (ENSCHIG00000020968) #26
Siberian musk deer	MODERN SPECIES	1225							ANO1 (ENSMMSG00000023035)	FADD (ENSMMSG00000023020)	ENSMMSG00000023015	PPFIA1 (ENSMMSG00000022901)	CTTN (ENSMMSG00000022818)	SHANK2 (ENSMMSG00000022477)	DHCR7 (ENSMMSG00000022424)	NADSYN1 (ENSMMSG00000022374)	MRGPRG (ENSMMSG00000022355)	OSBPL5 (ENSMMSG00000022304) #22	CARS1 (ENSMMSG00000022020)	NAP1L4 (ENSMMSG00000021913)	PHLDA2 (ENSMMSG00000021884) #23	SLC22A18 (ENSMMSG00000021861)	CDKN1C (ENSMMSG00000021836)	KCNQ1 (ENSMMSG00000021724)	TRPM5 (ENSMMSG00000021095)	TSSC4 (ENSMMSG00000021010)	CD81 (ENSMMSG00000020956)	ENSMMSG00000020937	ASCL2 (ENSMMSG00000020930)	TH (ENSMMSG00000020791) #25	INS (ENSMMSG00000020760)	IGF2 (ENSMMSG00000020706) #26	ENSMMSG00000020678
Yarkand deer	MODERN SPECIES	11	FGF19 (ENSCHYG00000000308)	FGF4 (ENSCHYG00000000320)	FGF3 (ENSCHYG00000000327)	ANO1 (ENSCHYG00000000377)	FADD (ENSCHYG00000000532)	ENSCHYG00000000547	ENSCHYG00000000552	PPFIA1 (ENSCHYG00000000593)	ENSCHYG00000000798	SHANK2 (ENSCHYG00000000934)	ENSCHYG00000001247	DHCR7 (ENSCHYG00000001261)	NADSYN1 (ENSCHYG00000001306)	ENSCHYG00000001517	MRGPRG (ENSCHYG00000001526)	OSBPL5 (ENSCHYG00000001576) #22	ENSCHYG00000001703	ENSCHYG00000001719	CARS1 (ENSCHYG00000001793)	NAP1L4 (ENSCHYG00000001968)	PHLDA2 (ENSCHYG00000002027) #23	SLC22A18 (ENSCHYG00000002046)	CDKN1C (ENSCHYG00000002075)	KCNQ1 (ENSCHYG00000002120)	ENSCHYG00000002194	TRPM5 (ENSCHYG00000002214)	CD81 (ENSCHYG00000002329)	ENSCHYG00000002365	TH (ENSCHYG00000002406) #25	INS (ENSCHYG00000002508)	ENSCHYG00000002520 #26
Camelidae	ANCESTRAL SPECIES	18	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769	ENSGT00940000167688
Arabian camel	MODERN SPECIES	1	LTO1 (ENSCDRG00005021470)	FGF19 (ENSCDRG00005021465)	FGF4 (ENSCDRG00005021463)	ENSCDRG00005021451	ANO1 (ENSCDRG00005021443)	FADD (ENSCDRG00005021431)	PPFIA1 (ENSCDRG00005021405)	CTTN (ENSCDRG00005021382)	ENSCDRG00005021368	ENSCDRG00005021363	ENSCDRG00005021359	ENSCDRG00005021353	DHCR7 (ENSCDRG00005021350)	NADSYN1 (ENSCDRG00005021345)	ENSCDRG00005021343	OSBPL5 (ENSCDRG00005021328) #22	ENSCDRG00005021320	CARS1 (ENSCDRG00005021307)	ENSCDRG00005021276	SLC22A18 (ENSCDRG00005021267)	ENSCDRG00005021259	KCNQ1 (ENSCDRG00005021166)	TRPM5 (ENSCDRG00005021069)	TSSC4 (ENSCDRG00005021044)	CD81 (ENSCDRG00005021026)	ENSCDRG00005021011	ASCL2 (ENSCDRG00005021008)	TH (ENSCDRG00005020996) #25	INS (ENSCDRG00005020986)	ENSCDRG00005020982	ENSCDRG00005020980
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Caniformia	ANCESTRAL SPECIES	21	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Canidae	ANCESTRAL SPECIES	13	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769
Dog	MODERN SPECIES	9	TPCN2 (ENSCAFG00845005889)	CCND1 (ENSCAFG00845015348)	ENSCAFG00845015244	FGF19 (ENSCAFG00845015136)	FGF4 (ENSCAFG00845015112)	FGF3 (ENSCAFG00845015080)	ANO1 (ENSCAFG00845014688)	FADD (ENSCAFG00845014582)	PPFIA1 (ENSCAFG00845014251)	CTTN (ENSCAFG00845013798)	SHANK2 (ENSCAFG00845013433)	ENSCAFG00845013273	DHCR7 (ENSCAFG00845013203)	NADSYN1 (ENSCAFG00845012869)	MRGPRG (ENSCAFG00845012762)	OSBPL5 (ENSCAFG00845012537) #22	ENSCAFG00845012415	CARS1 (ENSCAFG00845012304)	NAP1L4 (ENSCAFG00845012135)	PHLDA2 (ENSCAFG00845012068) #23	SLC22A18 (ENSCAFG00845011917)	ENSCAFG00845011808	KCNQ1 (ENSCAFG00845011629)	TRPM5 (ENSCAFG00845011524)	TSSC4 (ENSCAFG00845011479)	ENSCAFG00845011433	ASCL2 (ENSCAFG00845011417)	TH (ENSCAFG00845011201) #25	INS (ENSCAFG00845011141)	ENSCAFG00845011121	IGF2 (ENSCAFG00845011017) #26
Dingo	MODERN SPECIES	69	MRGPRF (ENSCAFG00020015373)	TPCN2 (ENSCAFG00020015381)	CCND1 (ENSCAFG00020015396)	ENSCAFG00020015398	FGF19 (ENSCAFG00020015401)	FGF4 (ENSCAFG00020015404)	FGF3 (ENSCAFG00020015407)	ANO1 (ENSCAFG00020015410)	FADD (ENSCAFG00020015414)	PPFIA1 (ENSCAFG00020015449)	CTTN (ENSCAFG00020016827)	SHANK2 (ENSCAFG00020016842)	DHCR7 (ENSCAFG00020016903)	NADSYN1 (ENSCAFG00020016999)	MRGPRG (ENSCAFG00020017170)	OSBPL5 (ENSCAFG00020017174) #22	ENSCAFG00020017184	CARS1 (ENSCAFG00020017188)	NAP1L4 (ENSCAFG00020017199)	PHLDA2 (ENSCAFG00020017218) #23	SLC22A18 (ENSCAFG00020017221)	CDKN1C (ENSCAFG00020017222)	KCNQ1 (ENSCAFG00020017230)	TRPM5 (ENSCAFG00020017310)	ENSCAFG00020017342	CD81 (ENSCAFG00020017346)	ENSCAFG00020017354	ASCL2 (ENSCAFG00020017372)	TH (ENSCAFG00020017377) #25	INS (ENSCAFG00020017402)	ENSCAFG00020017404
Red fox	MODERN SPECIES	49	ENSVVUG00000004719	ENSVVUG00000004714	FGF19 (ENSVVUG00000004712)	FGF4 (ENSVVUG00000004705)	FGF3 (ENSVVUG00000004701)	ANO1 (ENSVVUG00000004627)	FADD (ENSVVUG00000004618)	PPFIA1 (ENSVVUG00000004563)	CTTN (ENSVVUG00000004541)	SHANK2 (ENSVVUG00000003559)	ENSVVUG00000003507	DHCR7 (ENSVVUG00000003503)	NADSYN1 (ENSVVUG00000003498)	ENSVVUG00000003496	MRGPRG (ENSVVUG00000003491)	OSBPL5 (ENSVVUG00000003474) #22	ENSVVUG00000003466	CARS (ENSVVUG00000003438)	NAP1L4 (ENSVVUG00000003425)	PHLDA2 (ENSVVUG00000003414) #23	SLC22A18 (ENSVVUG00000003406)	ENSVVUG00000003401	KCNQ1 (ENSVVUG00000003078)	TRPM5 (ENSVVUG00000002887)	ENSVVUG00000002862	CD81 (ENSVVUG00000002853)	ENSVVUG00000002786	ASCL2 (ENSVVUG00000002778)	TH (ENSVVUG00000002704) #25	INS (ENSVVUG00000002675)	ENSVVUG00000002672
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Ursus	ANCESTRAL SPECIES	59			ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
American black bear	MODERN SPECIES	6789																OSBPL5 (ENSUAMG00000027798) #22
Polar bear	MODERN SPECIES	221	TPCN2 (ENSUMAG00000007334)	ENSUMAG00000007327	LTO1 (ENSUMAG00000007312)	FGF19 (ENSUMAG00000007302)	ENSUMAG00000007295	ANO1 (ENSUMAG00000007174)	ENSUMAG00000007134	PPFIA1 (ENSUMAG00000007084)	CTTN (ENSUMAG00000007071)	ENSUMAG00000007048	ENSUMAG00000007026	DHCR7 (ENSUMAG00000007009)	ENSUMAG00000007007	ENSUMAG00000007000	ENSUMAG00000006998	OSBPL5 (ENSUMAG00000006967) #22	ENSUMAG00000006941	CARS1 (ENSUMAG00000006494)	NAP1L4 (ENSUMAG00000006387)	SLC22A18 (ENSUMAG00000006323)	ENSUMAG00000006307	ENSUMAG00000006305	ENSUMAG00000006301	ENSUMAG00000006299	CD81 (ENSUMAG00000006294)	ENSUMAG00000006278	TH (ENSUMAG00000006253) #25	ENSUMAG00000006247	ENSUMAG00000006241	ENSUMAG00000006227	TNNT3 (ENSUMAG00000006145)
Giant Panda	MODERN SPECIES	7	TPCN2 (ENSAMEG00000001559)	ENSAMEG00000001950	ENSAMEG00000001983	FGF19 (ENSAMEG00000029958)	FGF4 (ENSAMEG00000001992)	ENSAMEG00000025861	ENSAMEG00000026287	ANO1 (ENSAMEG00000007119)	FADD (ENSAMEG00000007199)	PPFIA1 (ENSAMEG00000007203)	CTTN (ENSAMEG00000007350)	SHANK2 (ENSAMEG00000007430)	DHCR7 (ENSAMEG00000007479)	ENSAMEG00000007497	ENSAMEG00000019931	ENSAMEG00000007369 #22	CARS1 (ENSAMEG00000005710)	NAP1L4 (ENSAMEG00000005815)	SLC22A18 (ENSAMEG00000002295)	CDKN1C (ENSAMEG00000028690)	KCNQ1 (ENSAMEG00000002069)	TRPM5 (ENSAMEG00000002252)	TSSC4 (ENSAMEG00000024550)	ENSAMEG00000002216	ENSAMEG00000002203	ASCL2 (ENSAMEG00000028742)	TH (ENSAMEG00000002179) #25	INS (ENSAMEG00000026511)	IGF2 (ENSAMEG00000002167) #26	ENSAMEG00000029014	ENSAMEG00000002153
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152.q	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00940000160333	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688	ENSGT00940000160745 #26	ENSGT00390000007739.f
American mink	MODERN SPECIES	265														ENSNVIG00000008754	MRGPRG (ENSNVIG00000008739)	OSBPL5 (ENSNVIG00000008546) #22	ENSNVIG00000008512	CARS1 (ENSNVIG00000008287)	NAP1L4 (ENSNVIG00000008196)	SLC22A18 (ENSNVIG00000008024)	ENSNVIG00000008004	KCNQ1 (ENSNVIG00000007936)	TRPM5 (ENSNVIG00000007797)	TSSC4 (ENSNVIG00000007780)	CD81 (ENSNVIG00000007770)	ENSNVIG00000007752	ENSNVIG00000007717 #25	INS (ENSNVIG00000007708)	ENSNVIG00000007697	IGF2 (ENSNVIG00000007655) #26	ENSNVIG00000007593
Ferret	MODERN SPECIES	233	FADD (ENSMPUG00000004702)	ENSMPUG00000004709	PPFIA1 (ENSMPUG00000004719)	ENSMPUG00000004738	CTTN (ENSMPUG00000004744)	SHANK2 (ENSMPUG00000004764)	ENSMPUG00000004778	ENSMPUG00000004796	DHCR7 (ENSMPUG00000004899)	ENSMPUG00000004904	ENSMPUG00000004918	ENSMPUG00000004924	MRGPRG (ENSMPUG00000019032)	ENSMPUG00000004942	ENSMPUG00000005035	OSBPL5 (ENSMPUG00000004949) #22	ENSMPUG00000005039	CARS1 (ENSMPUG00000005051)	ENSMPUG00000005066	NAP1L4 (ENSMPUG00000005074)	SLC22A18 (ENSMPUG00000005089)	ENSMPUG00000005098	ENSMPUG00000005103	KCNQ1 (ENSMPUG00000005108)	TRPM5 (ENSMPUG00000005121)	ENSMPUG00000019034	TSSC4 (ENSMPUG00000019035)	CD81 (ENSMPUG00000005360)	ENSMPUG00000005587	ENSMPUG00000019037	ASCL2 (ENSMPUG00000019849)
Felidae	ANCESTRAL SPECIES		ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688
Panthera	ANCESTRAL SPECIES	18	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688
Panthera_a	ANCESTRAL SPECIES	18	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688
lion	MODERN SPECIES	22							ANO1 (ENSPLOG00000018940)	FADD (ENSPLOG00000018885)	PPFIA1 (ENSPLOG00000018760)	CTTN (ENSPLOG00000018506)	ENSPLOG00000018436	SHANK2 (ENSPLOG00000017841)	DHCR7 (ENSPLOG00000017721)	ENSPLOG00000017689	NADSYN1 (ENSPLOG00000017610)	OSBPL5 (ENSPLOG00000017070) #22	ENSPLOG00000017015	CARS1 (ENSPLOG00000016931)	ENSPLOG00000016887	NAP1L4 (ENSPLOG00000016825)	PHLDA2 (ENSPLOG00000016799) #23	SLC22A18 (ENSPLOG00000016642)	ENSPLOG00000016594	KCNQ1 (ENSPLOG00000016496)	TRPM5 (ENSPLOG00000015974)	TSSC4 (ENSPLOG00000015891)	CD81 (ENSPLOG00000015845)	ENSPLOG00000015815	ASCL2 (ENSPLOG00000015795)	TH (ENSPLOG00000015600) #25	INS (ENSPLOG00000015551)
leopard	MODERN SPECIES	64	IGHMBP2 (ENSPPRG00000024194)	MRGPRF (ENSPPRG00000024308)	TPCN2 (ENSPPRG00000024406)	CCND1 (ENSPPRG00000024642)	LTO1 (ENSPPRG00000024675)	FGF19 (ENSPPRG00000024723)	FGF4 (ENSPPRG00000024731)	FGF3 (ENSPPRG00000024743)	ANO1 (ENSPPRG00000024762)	FADD (ENSPPRG00000024863)	PPFIA1 (ENSPPRG00000024878)	CTTN (ENSPPRG00000024935)	SHANK2 (ENSPPRG00000024978)	DHCR7 (ENSPPRG00000025025)	NADSYN1 (ENSPPRG00000025032)	OSBPL5 (ENSPPRG00000025061) #22	CARS1 (ENSPPRG00000022117)	ENSPPRG00000020522	NAP1L4 (ENSPPRG00000018679)	SLC22A18 (ENSPPRG00000017788)	ENSPPRG00000016858	KCNQ1 (ENSPPRG00000015448)
Tiger	MODERN SPECIES	387													ENSPTIG00000007713	DHCR7 (ENSPTIG00000007688)	ENSPTIG00000007665	OSBPL5 (ENSPTIG00000007490) #22	CARS1 (ENSPTIG00000007355)	NAP1L4 (ENSPTIG00000007175)	ENSPTIG00000007007	CD81 (ENSPTIG00000006951)	ENSPTIG00000006789	TH (ENSPTIG00000006730) #25	ENSPTIG00000006665	ENSPTIG00000006615	LSP1 (ENSPTIG00000006406)	ENSPTIG00000006383	IFITM10 (ENSPTIG00000006347)
Cat	MODERN SPECIES	241	CCND1 (ENSFCAG00000008358)	LTO1 (ENSFCAG00000026606)	FGF19 (ENSFCAG00000027163)	FGF4 (ENSFCAG00000036639)	FGF3 (ENSFCAG00000043034)	ANO1 (ENSFCAG00000006735)	FADD (ENSFCAG00000042813)	PPFIA1 (ENSFCAG00000004765)	CTTN (ENSFCAG00000004767)	SHANK2 (ENSFCAG00000004768)	ENSFCAG00000050075	ENSFCAG00000050101	ENSFCAG00000031056	DHCR7 (ENSFCAG00000004115)	NADSYN1 (ENSFCAG00000004116)	OSBPL5 (ENSFCAG00000006947) #22	ENSFCAG00000048757	CARS1 (ENSFCAG00000006946)	NAP1L4 (ENSFCAG00000006945)	PHLDA2 (ENSFCAG00000045476) #23	SLC22A18 (ENSFCAG00000006944)	CDKN1C (ENSFCAG00000044319)	KCNQ1 (ENSFCAG00000006943)	TRPM5 (ENSFCAG00000022628)	TSSC4 (ENSFCAG00000043860)	CD81 (ENSFCAG00000006941)	TSPAN32 (ENSFCAG00000006936)	TH (ENSFCAG00000006939) #25	ENSFCAG00000045734	IGF2 (ENSFCAG00000032546) #26	ENSFCAG00000051309
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Chiroptera	ANCESTRAL SPECIES	14	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00920000150769
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00920000150769
Greater horseshoe bat	MODERN SPECIES	2	LTO1 (ENSRFEG00010020618)	FGF19 (ENSRFEG00010020594)	FGF4 (ENSRFEG00010020567)	FGF3 (ENSRFEG00010020546)	ANO1 (ENSRFEG00010020393)	FADD (ENSRFEG00010020342)	PPFIA1 (ENSRFEG00010020279)	CTTN (ENSRFEG00010020070)	SHANK2 (ENSRFEG00010019833)	DHCR7 (ENSRFEG00010019782)	NADSYN1 (ENSRFEG00010019709)	ENSRFEG00010019689	MRGPRG (ENSRFEG00010019682)	ENSRFEG00010019667	ENSRFEG00010019649	OSBPL5 (ENSRFEG00010019508) #22	ENSRFEG00010019461	CARS1 (ENSRFEG00010019344)	NAP1L4 (ENSRFEG00010019235)	PHLDA2 (ENSRFEG00010019209) #23	SLC22A18 (ENSRFEG00010019147)	CDKN1C (ENSRFEG00010019122)	KCNQ1 (ENSRFEG00010018942)	TRPM5 (ENSRFEG00010018900)	ENSRFEG00010018863	CD81 (ENSRFEG00010018819)	ENSRFEG00010018769	ASCL2 (ENSRFEG00010018749)	TH (ENSRFEG00010018664) #25	ENSRFEG00010018641	ENSRFEG00010018615
Megabat	MODERN SPECIES	24																OSBPL5 (ENSPVAG00000000004) #22
Equus	ANCESTRAL SPECIES	11	ENSGT00390000017361	ENSGT00940000160990	ENSGT00940000153899.a.b	ENSGT00940000159701	ENSGT00940000160974.b	ENSGT00390000002624	ENSGT00940000162463	ENSGT00940000160931	ENSGT00950000183205.a	ENSGT00950000182839.B.b	ENSGT00390000012150	ENSGT00390000001545	ENSGT00940000155653.b	ENSGT00940000161238.g	ENSGT00950000185387	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Donkey	MODERN SPECIES	8	TALDO1 (ENSEASG00005007429)	EPS8L2 (ENSEASG00005007425)	ENSEASG00005007421	DEAF1 (ENSEASG00005007288)	DRD4 (ENSEASG00005007269)	SCT (ENSEASG00005035518)	ENSEASG00005007145	CDHR5 (ENSEASG00005007256)	IRF7 (ENSEASG00005007246)	RASSF7 (ENSEASG00005007110)	LMNTD2 (ENSEASG00005007102)	LRRC56 (ENSEASG00005007090)	ENSEASG00005037601	ENSEASG00005036168	ENSEASG00005038525	ENSEASG00005000535 #22	ENSEASG00005033231	ENSEASG00005026277	CARS1 (ENSEASG00005014174)	ENSEASG00005038686	NAP1L4 (ENSEASG00005014128)	ENSEASG00005014127	SLC22A18 (ENSEASG00005014095)	CDKN1C (ENSEASG00005014083)	ENSEASG00005029886	TRPM5 (ENSEASG00005000003)	TSSC4 (ENSEASG00005033946)	CD81 (ENSEASG00005000006)	TSPAN32 (ENSEASG00005000008)	ASCL2 (ENSEASG00005033402)	TH (ENSEASG00005000018) #25
Horse	MODERN SPECIES	3	ENSECAG00000011469	DEAF1 (ENSECAG00000010151)	DRD4 (ENSECAG00000010137)	SCT (ENSECAG00000056522)	CDHR5 (ENSECAG00000009824)	IRF7 (ENSECAG00000009744)	PHRF1 (ENSECAG00000009477)	RASSF7 (ENSECAG00000009418)	ENSECAG00000052431	LRRC56 (ENSECAG00000008560)	ENSECAG00000039826	ENSECAG00000055468	ENSECAG00000039660	ENSECAG00000007557	ENSECAG00000040749	OSBPL5 (ENSECAG00000007415) #22	ENSECAG00000031722	ENSECAG00000035596	CARS1 (ENSECAG00000004558)	NAP1L4 (ENSECAG00000000817)	PHLDA2 (ENSECAG00000006973) #23	SLC22A18 (ENSECAG00000024975)	CDKN1C (ENSECAG00000031389)	KCNQ1 (ENSECAG00000024970)	TRPM5 (ENSECAG00000024688)	TSSC4 (ENSECAG00000059583)	CD81 (ENSECAG00000024654)	TSPAN32 (ENSECAG00000024627)	ENSECAG00000037796	TH (ENSECAG00000024625) #25	ENSECAG00000039118
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Primates	ANCESTRAL SPECIES		ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688	ENSGT00390000016804
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688	ENSGT00390000016804
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00940000161515	ENSGT01090000260043.a.a.a.b.a.a.b.a.b.a.b.a	ENSGT01090000260082.d.a.b.l	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00950000183087.A.a.b.a.g.b.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Gorilla	MODERN SPECIES	2	ENSGGOG00000042881	RRM1 (ENSGGOG00000014160)	ENSGGOG00000021980	ENSGGOG00000026774	STIM1 (ENSGGOG00000014152)	RHOG (ENSGGOG00000036597)	PGAP2 (ENSGGOG00000012554)	NUP98 (ENSGGOG00000009475)	CHRNA10 (ENSGGOG00000009471)	ART1 (ENSGGOG00000009466)	ART5 (ENSGGOG00000010424)	ENSGGOG00000006374	ZNF195 (ENSGGOG00000042313)	MRGPRE (ENSGGOG00000000919)	ENSGGOG00000000917	OSBPL5 (ENSGGOG00000013248) #22	CARS1 (ENSGGOG00000013232)	ENSGGOG00000036698	NAP1L4 (ENSGGOG00000013223)	ENSGGOG00000014396	SLC22A18 (ENSGGOG00000008253)	ENSGGOG00000043109	CDKN1C (ENSGGOG00000026923)	ENSGGOG00000041633	KCNQ1 (ENSGGOG00000013377)	TRPM5 (ENSGGOG00000007588)	ENSGGOG00000007586	CD81 (ENSGGOG00000007579)	TSPAN32 (ENSGGOG00000004838)	ENSGGOG00000012823	ASCL2 (ENSGGOG00000007421)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT01100000263522.A.c.b.c.a.ib.b	ENSGT00940000161515	ENSGT01090000260043.a.a.a.b.a.a.b.a.b.a.b.a	ENSGT01090000260082.d.a.b.l	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00950000183087.A.a.b.a.g.b.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Human	MODERN SPECIES	2	SSU72L3 (ENSG00000284546)	SSU72L4 (ENSG00000283873)	SSU72L2 (ENSG00000284306)	SSU72L5 (ENSG00000284018)	RRM1 (ENSG00000167325)	STIM1 (ENSG00000167323)	RHOG (ENSG00000177105)	PGAP2 (ENSG00000148985)	NUP98 (ENSG00000110713)	CHRNA10 (ENSG00000129749)	ART1 (ENSG00000129744)	ART5 (ENSG00000167311)	ZNF195 (ENSG00000005801)	MRGPRE (ENSG00000184350)	MRGPRG (ENSG00000182170)	OSBPL5 (ENSG00000021762) #22	CARS1 (ENSG00000110619)	NAP1L4 (ENSG00000205531)	PHLDA2 (ENSG00000181649) #23	SLC22A18 (ENSG00000110628)	CDKN1C (ENSG00000129757)	KCNQ1 (ENSG00000053918)	TRPM5 (ENSG00000070985)	TSSC4 (ENSG00000184281)	CD81 (ENSG00000110651)	TSPAN32 (ENSG00000064201)	C11orf21 (ENSG00000110665)	ASCL2 (ENSG00000183734)	TH (ENSG00000180176) #25	INS (ENSG00000254647)	INS-IGF2 (ENSG00000129965)
Pan	ANCESTRAL SPECIES	1	ENSGT00390000000214.a.a	ENSGT00950000183087.A.a.b.a.g.b.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b	ENSGT00940000164819	ENSGT00490000043385.u.a.a.a	ENSGT00940000161765.A	ENSGT00940000153165.a.b.a	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00910000146216	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Bonobo	MODERN SPECIES	2	ENSPPAG00000038844	RRM1 (ENSPPAG00000038191)	ENSPPAG00000028378	STIM1 (ENSPPAG00000038836)	RHOG (ENSPPAG00000008794)	PGAP2 (ENSPPAG00000042490)	NUP98 (ENSPPAG00000035522)	CHRNA10 (ENSPPAG00000034846)	ART1 (ENSPPAG00000029773)	ART5 (ENSPPAG00000027161)	ENSPPAG00000018960	ENSPPAG00000042976	ZNF195 (ENSPPAG00000027752)	MRGPRE (ENSPPAG00000015480)	MRGPRG (ENSPPAG00000011441)	OSBPL5 (ENSPPAG00000040073) #22	CARS1 (ENSPPAG00000032383)	ENSPPAG00000016477	NAP1L4 (ENSPPAG00000032258)	ENSPPAG00000041766	SLC22A18 (ENSPPAG00000031256)	ENSPPAG00000033641	ENSPPAG00000038753	ENSPPAG00000035461	TRPM5 (ENSPPAG00000034292)	ENSPPAG00000027484	CD81 (ENSPPAG00000030643)	TSPAN32 (ENSPPAG00000040841)	ENSPPAG00000028313	TH (ENSPPAG00000037007) #25	ENSPPAG00000040990
Chimpanzee	MODERN SPECIES	2	OR52B4 (ENSPTRG00000003210)	ENSPTRG00000050370	RRM1 (ENSPTRG00000003207)	STIM1 (ENSPTRG00000003204)	RHOG (ENSPTRG00000028742)	PGAP2 (ENSPTRG00000003202)	NUP98 (ENSPTRG00000003200)	CHRNA10 (ENSPTRG00000003199)	ART1 (ENSPTRG00000003198)	ART5 (ENSPTRG00000003197)	ENSPTRG00000050622	ENSPTRG00000048470	ZNF195 (ENSPTRG00000003194)	MRGPRE (ENSPTRG00000003193)	MRGPRG (ENSPTRG00000028745)	OSBPL5 (ENSPTRG00000044094) #22	CARS1 (ENSPTRG00000003188)	ENSPTRG00000048082	NAP1L4 (ENSPTRG00000028747)	PHLDA2 (ENSPTRG00000003185)	SLC22A18 (ENSPTRG00000003184)	ENSPTRG00000039042	CDKN1C (ENSPTRG00000003182)	ENSPTRG00000051702	KCNQ1 (ENSPTRG00000045076)	TRPM5 (ENSPTRG00000003179)	TSSC4 (ENSPTRG00000003178)	CD81 (ENSPTRG00000003177)	TSPAN32 (ENSPTRG00000044879)	C11H11orf21 (ENSPTRG00000048114)	ASCL2 (ENSPTRG00000044950)
Orangutan	MODERN SPECIES	2	FGF19 (ENSPPYG00000002960)	ENSPPYG00000033162	FGF4 (ENSPPYG00000002958)	FGF3 (ENSPPYG00000002957)	ANO1 (ENSPPYG00000002956)	FADD (ENSPPYG00000002955)	PPFIA1 (ENSPPYG00000025904)	CTTN (ENSPPYG00000002954)	SHANK2 (ENSPPYG00000002953)	ENSPPYG00000036563	DHCR7 (ENSPPYG00000033723)	NADSYN1 (ENSPPYG00000002948)	ZNF195 (ENSPPYG00000002946)	MRGPRE (ENSPPYG00000002945)	MRGPRG (ENSPPYG00000002943)	OSBPL5 (ENSPPYG00000002942) #22	CARS1 (ENSPPYG00000002940)	NAP1L4 (ENSPPYG00000002938)	PHLDA2 (ENSPPYG00000002937) #23	SLC22A18 (ENSPPYG00000002936)	ENSPPYG00000002935	ENSPPYG00000002934	ENSPPYG00000002933	KCNQ1 (ENSPPYG00000002932)	TRPM5 (ENSPPYG00000002931)	ENSPPYG00000002930	CD81 (ENSPPYG00000002929)	TSPAN32 (ENSPPYG00000002928)	ENSPPYG00000002927	ASCL2 (ENSPPYG00000002926)	TH (ENSPPYG00000002924) #25
Gibbon	MODERN SPECIES	19	PPFIA1 (ENSNLEG00000010473)	ENSNLEG00000010556	ENSNLEG00000010602	ENSNLEG00000034483	DHCR7 (ENSNLEG00000032731)	NADSYN1 (ENSNLEG00000010685)	KRTAP5-7 (ENSNLEG00000010786)	ENSNLEG00000028330	ENSNLEG00000013291	ENSNLEG00000031546	ENSNLEG00000032416	ENSNLEG00000028347	ZNF195 (ENSNLEG00000010804)	MRGPRE (ENSNLEG00000019178)	MRGPRG (ENSNLEG00000010811)	ENSNLEG00000010812 #22	NAP1L4 (ENSNLEG00000010841)	ENSNLEG00000019179	ENSNLEG00000010937	SLC22A18 (ENSNLEG00000010944)	ENSNLEG00000010948	ENSNLEG00000031654	ENSNLEG00000036261	TRPM5 (ENSNLEG00000002736)	CD81 (ENSNLEG00000002706)	ENSNLEG00000002682	ENSNLEG00000002674	ASCL2 (ENSNLEG00000034709)	TH (ENSNLEG00000013470) #25	ENSNLEG00000013456	ENSNLEG00000029193
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000154251.A.b.a.b.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000154251.A.b.a.b.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00950000183210.d.b	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843
Macaca	ANCESTRAL SPECIES	2	ENSGT00960000186788	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000164776.b	ENSGT01060000250173	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677.d	ENSGT00620000089395	ENSGT00940000161001	ENSGT00950000183210.d.b	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843
Pig-tailed macaque	MODERN SPECIES	433	ENSMNEG00000044891	FGF4 (ENSMNEG00000042206)	FGF3 (ENSMNEG00000044971)	ANO1 (ENSMNEG00000004507)	FADD (ENSMNEG00000038046)	PPFIA1 (ENSMNEG00000031136)	CTTN (ENSMNEG00000037757)	SHANK2 (ENSMNEG00000031408)	ENSMNEG00000032531	DHCR7 (ENSMNEG00000043442)	NADSYN1 (ENSMNEG00000032850)	ENSMNEG00000028295	ENSMNEG00000031331	KRTAP5-10 (ENSMNEG00000034949)	ENSMNEG00000037654	OSBPL5 (ENSMNEG00000043826) #22	CARS1 (ENSMNEG00000034229)	NAP1L4 (ENSMNEG00000039481)	SLC22A18 (ENSMNEG00000037203)	ENSMNEG00000016035	ENSMNEG00000030432	ENSMNEG00000036178	KCNQ1 (ENSMNEG00000043384)	ENSMNEG00000045079	TRPM5 (ENSMNEG00000031765)	TSSC4 (ENSMNEG00000039665)	CD81 (ENSMNEG00000005402)	TSPAN32 (ENSMNEG00000031055)	C11orf21 (ENSMNEG00000041841)	ASCL2 (ENSMNEG00000010750)	TH (ENSMNEG00000037259) #25
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.b.a.a.b	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT01100000263493.a.b.b.a.a.b.b.a.b.b.b.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677.d	ENSGT00620000089395	ENSGT00940000161001	ENSGT00950000183210.d.b	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Rhesus	MODERN SPECIES	5	ENSMMUG00000056834	ANO1 (ENSMMUG00000019734)	FADD (ENSMMUG00000054645)	PPFIA1 (ENSMMUG00000013265)	CTTN (ENSMMUG00000013267)	ENSMMUG00000052168	ENSMMUG00000061775	ENSMMUG00000064128	SHANK2 (ENSMMUG00000019736)	ACTE1 (ENSMMUG00000005019)	DHCR7 (ENSMMUG00000011976)	ZNF195 (ENSMMUG00000018698)	NADSYN1 (ENSMMUG00000011977)	MRGPRG (ENSMMUG00000051131)	ENSMMUG00000059138	OSBPL5 (ENSMMUG00000000513) #22	CARS1 (ENSMMUG00000000511)	NAP1L4 (ENSMMUG00000007753)	PHLDA2 (ENSMMUG00000007752) #23	SLC22A18 (ENSMMUG00000007751)	CDKN1C (ENSMMUG00000037980)	ENSMMUG00000049690	ENSMMUG00000039514	KCNQ1 (ENSMMUG00000007742)	TRPM5 (ENSMMUG00000004773)	TSSC4 (ENSMMUG00000013772)	CD81 (ENSMMUG00000002043)	TSPAN32 (ENSMMUG00000001324)	C11orf21 (ENSMMUG00000046812)	ASCL2 (ENSMMUG00000001322)	TH (ENSMMUG00000003912) #25
Crab-eating macaque	MODERN SPECIES	5	FADD (ENSMFAG00000041718)	PPFIA1 (ENSMFAG00000032570)	CTTN (ENSMFAG00000022887)	ENSMFAG00000060197	SHANK2 (ENSMFAG00000031467)	ENSMFAG00000007500	ENSMFAG00000058717	ENSMFAG00000062361	ENSMFAG00000052327	DHCR7 (ENSMFAG00000003021)	NADSYN1 (ENSMFAG00000040085)	ENSMFAG00000056697	ENSMFAG00000032492	MRGPRE (ENSMFAG00000056396)	ENSMFAG00000055808	OSBPL5 (ENSMFAG00000033431) #22	CARS1 (ENSMFAG00000000778)	ENSMFAG00000051808	NAP1L4 (ENSMFAG00000002601)	PHLDA2 (ENSMFAG00000040835) #23	SLC22A18 (ENSMFAG00000038599)	CDKN1C (ENSMFAG00000037524)	ENSMFAG00000037563	ENSMFAG00000000298	KCNQ1 (ENSMFAG00000044043)	TRPM5 (ENSMFAG00000042635)	TSSC4 (ENSMFAG00000038372)	CD81 (ENSMFAG00000007233)	ENSMFAG00000031437	C11orf21 (ENSMFAG00000033732)	TH (ENSMFAG00000042448) #25
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000154251.A.b.a.b.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00950000183210.d.b	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041
Olive baboon	MODERN SPECIES	3	FGF3 (ENSPANG00000023335)	ENSPANG00000038148	ENSPANG00000042473	ANO1 (ENSPANG00000003976)	FADD (ENSPANG00000023465)	PPFIA1 (ENSPANG00000015386)	CTTN (ENSPANG00000013112)	SHANK2 (ENSPANG00000018812)	ENSPANG00000044958	DHCR7 (ENSPANG00000013062)	NADSYN1 (ENSPANG00000011530)	KRTAP5-9 (ENSPANG00000031335)	ENSPANG00000045732	MRGPRE (ENSPANG00000037492)	MRGPRG (ENSPANG00000037617)	OSBPL5 (ENSPANG00000007472) #22	ENSPANG00000042600	CARS1 (ENSPANG00000015564)	NAP1L4 (ENSPANG00000008348)	PHLDA2 (ENSPANG00000031929) #23	SLC22A18 (ENSPANG00000023336)	ENSPANG00000041515	KCNQ1 (ENSPANG00000006760)	ENSPANG00000037475	TRPM5 (ENSPANG00000007388)	TSSC4 (ENSPANG00000042853)	CD81 (ENSPANG00000012976)	TSPAN32 (ENSPANG00000013063)	C11orf21 (ENSPANG00000034344)	ASCL2 (ENSPANG00000019205)	ENSPANG00000018813
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00960000186932	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000154251.A.b.a.b.b	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b.h	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00620000089395	ENSGT00950000183210.d.b	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041	ENSGT00950000182885.C.a #25
Sooty mangabey	MODERN SPECIES	518	FGF19 (ENSCATG00000038630)	ENSCATG00000032815	FGF4 (ENSCATG00000034644)	FGF3 (ENSCATG00000023721)	ANO1 (ENSCATG00000029714)	FADD (ENSCATG00000035655)	PPFIA1 (ENSCATG00000035769)	CTTN (ENSCATG00000038054)	ENSCATG00000041207	SHANK2 (ENSCATG00000038261)	DHCR7 (ENSCATG00000031848)	NADSYN1 (ENSCATG00000030630)	KRTAP5-7 (ENSCATG00000042729)	ENSCATG00000042575	ZNF195 (ENSCATG00000031492)	OSBPL5 (ENSCATG00000014690) #22	CARS1 (ENSCATG00000035979)	NAP1L4 (ENSCATG00000035520)	SLC22A18 (ENSCATG00000006581)	ENSCATG00000041796	CDKN1C (ENSCATG00000030398)	ENSCATG00000042752	ENSCATG00000032596	KCNQ1 (ENSCATG00000037006)	TRPM5 (ENSCATG00000031262)	ENSCATG00000038899	CD81 (ENSCATG00000039786)	TSPAN32 (ENSCATG00000033086)	C11orf21 (ENSCATG00000031829)	ASCL2 (ENSCATG00000002872)	TH (ENSCATG00000033664) #25
Drill	MODERN SPECIES	974											DHCR7 (ENSMLEG00000028930)	NADSYN1 (ENSMLEG00000044446)	ENSMLEG00000025930	MRGPRE (ENSMLEG00000017996)	MRGPRG (ENSMLEG00000033732)	OSBPL5 (ENSMLEG00000036003) #22	CARS1 (ENSMLEG00000029795)	NAP1L4 (ENSMLEG00000028298)	SLC22A18 (ENSMLEG00000029562)	ENSMLEG00000036241	ENSMLEG00000036537	KCNQ1 (ENSMLEG00000043991)	ENSMLEG00000007496	TRPM5 (ENSMLEG00000030155)	TSSC4 (ENSMLEG00000040755)	CD81 (ENSMLEG00000037580)	TSPAN32 (ENSMLEG00000039192)	C11orf21 (ENSMLEG00000034304)	TH (ENSMLEG00000034243) #25	INS (ENSMLEG00000032291)	IGF2 (ENSMLEG00000003815) #26
Vervet Monkey	MODERN SPECIES		FGF19 (ENSCSAG00000009286)	FGF4 (ENSCSAG00000009298)	FGF3 (ENSCSAG00000009310)	ANO1 (ENSCSAG00000009324)	ENSCSAG00000009328	PPFIA1 (ENSCSAG00000009343)	CTTN (ENSCSAG00000009367)	SHANK2 (ENSCSAG00000009403)	DHCR7 (ENSCSAG00000009420)	NADSYN1 (ENSCSAG00000009433)	ENSCSAG00000009446	ENSCSAG00000009479	ENSCSAG00000009521	MRGPRE (ENSCSAG00000018960)	MRGPRG (ENSCSAG00000018959)	OSBPL5 (ENSCSAG00000009536) #22	CARS1 (ENSCSAG00000009547)	ENSCSAG00000018958	NAP1L4 (ENSCSAG00000009554)	PHLDA2 (ENSCSAG00000018957) #23	SLC22A18 (ENSCSAG00000009558)	CDKN1C (ENSCSAG00000009560)	KCNQ1 (ENSCSAG00000009565)	TRPM5 (ENSCSAG00000009682)	TSSC4 (ENSCSAG00000009719)	CD81 (ENSCSAG00000009729)	TSPAN32 (ENSCSAG00000009769)	C11orf21 (ENSCSAG00000009777)	ASCL2 (ENSCSAG00000018956)	TH (ENSCSAG00000009788) #25	INS (ENSCSAG00000009797)
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT00900000140979.a.a.`b.a.o.b.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00390000017913.d	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000154251.A.b.a.b.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00390000014180	ENSGT00940000153362.b.h	ENSGT00910000146216	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00940000163041	ENSGT00950000182885.C.a #25
Golden snub-nosed monkey	MODERN SPECIES	2322	FGF19 (ENSRROG00000032527)	FGF4 (ENSRROG00000028586)	FGF3 (ENSRROG00000043451)	ANO1 (ENSRROG00000033110)	FADD (ENSRROG00000041037)	ENSRROG00000035511	PPFIA1 (ENSRROG00000040126)	CTTN (ENSRROG00000040322)	ENSRROG00000033991	ENSRROG00000045526	SHANK2 (ENSRROG00000031929)	DHCR7 (ENSRROG00000041957)	NADSYN1 (ENSRROG00000026981)	ENSRROG00000034233	ENSRROG00000028333	OSBPL5 (ENSRROG00000042257) #22	CARS1 (ENSRROG00000041623)	ENSRROG00000031711	NAP1L4 (ENSRROG00000041303)	ENSRROG00000044553	SLC22A18 (ENSRROG00000042171)	ENSRROG00000043104	CDKN1C (ENSRROG00000019036)	ENSRROG00000028793	KCNQ1 (ENSRROG00000042831)	TRPM5 (ENSRROG00000038513)	TSSC4 (ENSRROG00000028278)	CD81 (ENSRROG00000043618)	TSPAN32 (ENSRROG00000036475)	C11orf21 (ENSRROG00000029654)	TH (ENSRROG00000043900) #25
Black snub-nosed monkey	MODERN SPECIES	100	FGF4 (ENSRBIG00000010219)	FGF3 (ENSRBIG00000030779)	ANO1 (ENSRBIG00000014113)	FADD (ENSRBIG00000036931)	PPFIA1 (ENSRBIG00000000739)	ENSRBIG00000042884	CTTN (ENSRBIG00000039974)	ENSRBIG00000034203	SHANK2 (ENSRBIG00000040196)	ENSRBIG00000042124	ENSRBIG00000028148	DHCR7 (ENSRBIG00000013070)	NADSYN1 (ENSRBIG00000040100)	ENSRBIG00000029581	MRGPRG (ENSRBIG00000034230)	OSBPL5 (ENSRBIG00000030395) #22	CARS1 (ENSRBIG00000033195)	ENSRBIG00000026652	NAP1L4 (ENSRBIG00000041467)	SLC22A18 (ENSRBIG00000037594)	ENSRBIG00000043210	ENSRBIG00000002107	KCNQ1 (ENSRBIG00000044068)	TRPM5 (ENSRBIG00000042703)	TSSC4 (ENSRBIG00000044192)	CD81 (ENSRBIG00000035117)	TSPAN32 (ENSRBIG00000033430)	C11orf21 (ENSRBIG00000039034)	ASCL2 (ENSRBIG00000024595)	TH (ENSRBIG00000033743) #25	INS (ENSRBIG00000031966)
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00940000159763	ENSGT00940000157816	ENSGT01030000240235	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00530000067982	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Mas night monkey	MODERN SPECIES	949	PNPLA2 (ENSANAG00000038297)	CRACR2B (ENSANAG00000036173)	CD151 (ENSANAG00000028912)	POLR2L (ENSANAG00000022996)	ENSANAG00000037678	CHID1 (ENSANAG00000037661)	AP2A2 (ENSANAG00000022883)	MUC6 (ENSANAG00000034294)	ENSANAG00000037856	TOLLIP (ENSANAG00000024532)	BRSK2 (ENSANAG00000037900)	MOB2 (ENSANAG00000032552)	DUSP8 (ENSANAG00000024908)	ZNF195 (ENSANAG00000024450)	ENSANAG00000025701	OSBPL5 (ENSANAG00000026417) #22	CARS1 (ENSANAG00000027534)	NAP1L4 (ENSANAG00000018345)	SLC22A18 (ENSANAG00000036918)	ENSANAG00000032199	ENSANAG00000024894	KCNQ1 (ENSANAG00000032186)	TRPM5 (ENSANAG00000035036)	ENSANAG00000038427	CD81 (ENSANAG00000037171)	TSPAN32 (ENSANAG00000021121)	ASCL2 (ENSANAG00000036360)	TH (ENSANAG00000020359) #25	INS (ENSANAG00000028907)	IGF2 (ENSANAG00000015793) #26	ENSANAG00000010507
Cebidae	ANCESTRAL SPECIES		ENSGT00940000159763	ENSGT00940000157816	ENSGT01030000240235	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b.h	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739
Cebidae_a	ANCESTRAL SPECIES	72	ENSGT00940000160155	ENSGT00440000033504.A	ENSGT00940000157760	ENSGT00390000007087.t	ENSGT00940000160434	ENSGT00390000012069	ENSGT00950000182838.A.a.b	ENSGT00940000161708	ENSGT00940000156289	ENSGT00390000013104	ENSGT00940000157462.C	ENSGT01050000244956.a.a	ENSGT00940000160004	ENSGT00940000164129	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b.h	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00390000000843	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739	ENSGT00940000158477
Capuchin	MODERN SPECIES	384	CD151 (ENSCCAG00000022824)	POLR2L (ENSCCAG00000035630)	TSPAN4 (ENSCCAG00000035990)	CHID1 (ENSCCAG00000037386)	AP2A2 (ENSCCAG00000029284)	MUC6 (ENSCCAG00000034096)	MUC2 (ENSCCAG00000018661)	ENSCCAG00000020227	TOLLIP (ENSCCAG00000021840)	BRSK2 (ENSCCAG00000023751)	MOB2 (ENSCCAG00000031825)	DUSP8 (ENSCCAG00000026130)	ENSCCAG00000037638	ZNF195 (ENSCCAG00000033933)	MRGPRG (ENSCCAG00000020841)	OSBPL5 (ENSCCAG00000022552) #22	CARS1 (ENSCCAG00000032224)	NAP1L4 (ENSCCAG00000026903)	SLC22A18 (ENSCCAG00000023821)	ENSCCAG00000026251	CDKN1C (ENSCCAG00000022638)	KCNQ1 (ENSCCAG00000031028)	TRPM5 (ENSCCAG00000034627)	ENSCCAG00000017538	CD81 (ENSCCAG00000023088)	TSPAN32 (ENSCCAG00000033182)	TH (ENSCCAG00000029578) #25	INS (ENSCCAG00000029201)	IGF2 (ENSCCAG00000026656) #26
Bolivian squirrel monkey	MODERN SPECIES	220	PIDD1 (ENSSBOG00000022368)	ENSSBOG00000033876	ENSSBOG00000033496	CD151 (ENSSBOG00000029955)	TSPAN4 (ENSSBOG00000034031)	CHID1 (ENSSBOG00000034470)	AP2A2 (ENSSBOG00000035919)	MUC6 (ENSSBOG00000035497)	MUC2 (ENSSBOG00000030792)	TOLLIP (ENSSBOG00000029928)	BRSK2 (ENSSBOG00000032784)	MOB2 (ENSSBOG00000025698)	DUSP8 (ENSSBOG00000022266)	ENSSBOG00000027793	ENSSBOG00000031366	OSBPL5 (ENSSBOG00000034404) #22	CARS1 (ENSSBOG00000026536)	NAP1L4 (ENSSBOG00000024050)	SLC22A18 (ENSSBOG00000026078)	KCNQ1 (ENSSBOG00000019679)	TRPM5 (ENSSBOG00000024344)	ENSSBOG00000027823	CD81 (ENSSBOG00000009381)	TSPAN32 (ENSSBOG00000021210)	ENSSBOG00000032981	TH (ENSSBOG00000026453) #25	INS (ENSSBOG00000032252)	IGF2 (ENSSBOG00000023566) #26	ENSSBOG00000025338	TNNT3 (ENSSBOG00000031503)	PRR33 (ENSSBOG00000014490)
Marmoset	MODERN SPECIES	2	FGF19 (ENSCJAG00000075154)	FGF4 (ENSCJAG00000005026)	FGF3 (ENSCJAG00000009730)	ANO1 (ENSCJAG00000071717)	ENSCJAG00000086216	FADD (ENSCJAG00000000932)	PPFIA1 (ENSCJAG00000000936)	CTTN (ENSCJAG00000000985)	SHANK2 (ENSCJAG00000001019)	ENSCJAG00000066476	ENSCJAG00000070399	DHCR7 (ENSCJAG00000040023)	ENSCJAG00000085647	ENSCJAG00000011506	MRGPRE (ENSCJAG00000074916)	OSBPL5 (ENSCJAG00000011522) #22	ENSCJAG00000086058	CARS1 (ENSCJAG00000011585)	NAP1L4 (ENSCJAG00000011636)	PHLDA2 (ENSCJAG00000011680) #23	SLC22A18 (ENSCJAG00000011682)	CDKN1C (ENSCJAG00000011703)	KCNQ1 (ENSCJAG00000011708)	TRPM5 (ENSCJAG00000014749)	TSSC4 (ENSCJAG00000052019)	CD81 (ENSCJAG00000014738)	TSPAN32 (ENSCJAG00000083464)	ENSCJAG00000072782	ASCL2 (ENSCJAG00000079397)	TH (ENSCJAG00000018412) #25	INS (ENSCJAG00000035804)
Tarsier	MODERN SPECIES	4836																OSBPL5 (ENSTSYG00000028206) #22
Strepsirrhini	ANCESTRAL SPECIES	35	ENSGT00950000182898.a.a.a.a.a	ENSGT00940000157679	ENSGT00940000161779	ENSGT00940000161834	ENSGT00940000162405	ENSGT00390000013762.a	ENSGT00390000009423.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000155078.a.b.b	ENSGT00940000161973	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00950000182923.A	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00530000064165.a	ENSGT00950000182898.a.a.a.a.a	ENSGT00940000157679	ENSGT00940000161779	ENSGT00940000161834	ENSGT00940000162405	ENSGT00390000013762.a	ENSGT00390000009423.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000155078.a.b.b	ENSGT00940000161973	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00950000182923.A	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00530000064165.a	ENSGT00950000182898.a.a.a.a.a	ENSGT00940000157679	ENSGT00940000161779	ENSGT00940000161834	ENSGT00940000162405	ENSGT00390000013762.a	ENSGT00390000009423.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000155078.a.b.b	ENSGT00940000161973	ENSGT00950000183209.a	ENSGT00390000006734.a	ENSGT00950000182923.A	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739
Greater bamboo lemur	MODERN SPECIES	269							ENSPSMG00000025271	SCT (ENSPSMG00000025272)	IRF7 (ENSPSMG00000025280)	PHRF1 (ENSPSMG00000025290)	RASSF7 (ENSPSMG00000025295)	LRRC56 (ENSPSMG00000025311)	LMNTD2 (ENSPSMG00000025318)	HRAS (ENSPSMG00000025336)	MRGPRE (ENSPSMG00000025338)	OSBPL5 (ENSPSMG00000025374) #22	CARS1 (ENSPSMG00000025479)	NAP1L4 (ENSPSMG00000025508)	PHLDA2 (ENSPSMG00000025517) #23	SLC22A18 (ENSPSMG00000025522)	ENSPSMG00000025527	KCNQ1 (ENSPSMG00000025532)	TRPM5 (ENSPSMG00000025543)	ENSPSMG00000025545	CD81 (ENSPSMG00000025547)	ENSPSMG00000025550
Coquerels sifaka	MODERN SPECIES	124	PELI3 (ENSPCOG00000019786)	MRPL11 (ENSPCOG00000013514)	NPAS4 (ENSPCOG00000028545)	SLC29A2 (ENSPCOG00000015652)	B4GAT1 (ENSPCOG00000012745)	BRMS1 (ENSPCOG00000020916)	RIN1 (ENSPCOG00000027562)	TMEM151A (ENSPCOG00000019140)	YIF1A (ENSPCOG00000026404)	CNIH2 (ENSPCOG00000026142)	RAB1B (ENSPCOG00000025845)	KLC2 (ENSPCOG00000026422)	PACS1 (ENSPCOG00000026736)	SF3B2 (ENSPCOG00000025375)	GAL3ST3 (ENSPCOG00000027567)	OSBPL5 (ENSPCOG00000027503) #22	CARS1 (ENSPCOG00000023381)	NAP1L4 (ENSPCOG00000016361)	SLC22A18 (ENSPCOG00000010689)	CDKN1C (ENSPCOG00000026570)	KCNQ1 (ENSPCOG00000020397)
Mouse lemur	MODERN SPECIES	27	NPAS4 (ENSMICG00000003754)	SLC29A2 (ENSMICG00000003744)	B4GAT1 (ENSMICG00000015298)	BRMS1 (ENSMICG00000015290)	RIN1 (ENSMICG00000008665)	CD248 (ENSMICG00000032904)	TMEM151A (ENSMICG00000008650)	YIF1A (ENSMICG00000008639)	CNIH2 (ENSMICG00000028873)	RAB1B (ENSMICG00000029171)	KLC2 (ENSMICG00000008601)	ENSMICG00000036403	PACS1 (ENSMICG00000008585)	ENSMICG00000008565	GAL3ST3 (ENSMICG00000044621)	OSBPL5 (ENSMICG00000004318) #22	CARS1 (ENSMICG00000003357)	NAP1L4 (ENSMICG00000003349)	SLC22A18 (ENSMICG00000031505)	CDKN1C (ENSMICG00000032558)	KCNQ1 (ENSMICG00000032341)	TRPM5 (ENSMICG00000035752)	TSSC4 (ENSMICG00000044190)	CD81 (ENSMICG00000017181)	TH (ENSMICG00000035178) #25	INS (ENSMICG00000009410)	IGF2 (ENSMICG00000045720) #26	ENSMICG00000042091	TNNT3 (ENSMICG00000028662)	HRAS (ENSMICG00000006472)	LRRC56 (ENSMICG00000031965)
Bushbaby	MODERN SPECIES	249	B4GAT1 (ENSOGAG00000025715)	BRMS1 (ENSOGAG00000025173)	RIN1 (ENSOGAG00000029244)	CD248 (ENSOGAG00000026351)	TMEM151A (ENSOGAG00000024785)	YIF1A (ENSOGAG00000002805)	CNIH2 (ENSOGAG00000028278)	RAB1B (ENSOGAG00000028013)	KLC2 (ENSOGAG00000002802)	PACS1 (ENSOGAG00000002797)	ENSOGAG00000027077	SF3B2 (ENSOGAG00000005799)	GAL3ST3 (ENSOGAG00000025783)	MRGPRE (ENSOGAG00000030344)	MRGPRG (ENSOGAG00000027307)	OSBPL5 (ENSOGAG00000014365) #22	CARS1 (ENSOGAG00000005982)	NAP1L4 (ENSOGAG00000000085)	PHLDA2 (ENSOGAG00000028822) #23	SLC22A18 (ENSOGAG00000000084)	CDKN1C (ENSOGAG00000029305)	KCNQ1 (ENSOGAG00000001375)	TRPM5 (ENSOGAG00000015780)	TSSC4 (ENSOGAG00000026523)	CD81 (ENSOGAG00000015774)	TSPAN32 (ENSOGAG00000027394)	ASCL2 (ENSOGAG00000034847)	TH (ENSOGAG00000017051) #25	INS (ENSOGAG00000034796)	ENSOGAG00000033140 #26	ENSOGAG00000029988
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Glires	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Golden Hamster	MODERN SPECIES	617	Ccnd1 (ENSMAUG00000017636)	LTO1 (ENSMAUG00000018685)	Fgf15 (ENSMAUG00000018536)	ENSMAUG00000018543	Fgf3 (ENSMAUG00000017622)	Ano1 (ENSMAUG00000020665)	Fadd (ENSMAUG00000017656)	Ppfia1 (ENSMAUG00000019398)	Cttn (ENSMAUG00000018999)	Shank2 (ENSMAUG00000020561)	Acte1 (ENSMAUG00000018219)	Dhcr7 (ENSMAUG00000017958)	Nadsyn1 (ENSMAUG00000018638)	Mrgpre (ENSMAUG00000019867)	Mrgprg (ENSMAUG00000002319)	Osbpl5 (ENSMAUG00000018579) #22	ENSMAUG00000017790	Tnfrsf26 (ENSMAUG00000020091)	Cars (ENSMAUG00000019542)	Nap1l4 (ENSMAUG00000019725)	Phlda2 (ENSMAUG00000019087) #23	Slc22a18 (ENSMAUG00000019948)	Cdkn1c (ENSMAUG00000017979)	Kcnq1 (ENSMAUG00000020417)	Trpm5 (ENSMAUG00000018047)	Tssc4 (ENSMAUG00000018732)	Cd81 (ENSMAUG00000018204)	Tspan32 (ENSMAUG00000019837)	ENSMAUG00000001826	Ascl2 (ENSMAUG00000019079)	Th (ENSMAUG00000018721) #25
Chinese hamster chok1gshd	MODERN SPECIES	401	LTO1 (ENSCGRG00001016809)	Fgf15 (ENSCGRG00001006635)	Fgf4 (ENSCGRG00001018014)	Fgf3 (ENSCGRG00001022007)	Ano1 (ENSCGRG00001024262)	Fadd (ENSCGRG00001007270)	Ppfia1 (ENSCGRG00001010485)	Cttn (ENSCGRG00001016778)	ENSCGRG00001012540	ENSCGRG00001014608	Acte1 (ENSCGRG00001020527)	Dhcr7 (ENSCGRG00001000860)	Nadsyn1 (ENSCGRG00001009314)	Mrgpre (ENSCGRG00001001111)	Mrgprg (ENSCGRG00001012867)	Osbpl5 (ENSCGRG00001012618) #22	ENSCGRG00001023145	Tnfrsf26 (ENSCGRG00001014733)	Cars (ENSCGRG00001018006)	Nap1l4 (ENSCGRG00001017042)	Phlda2 (ENSCGRG00001023142) #23	Slc22a18 (ENSCGRG00001018930)	Cdkn1c (ENSCGRG00001014898)	Kcnq1 (ENSCGRG00001020941)	Trpm5 (ENSCGRG00001020794)	Cd81 (ENSCGRG00001013376)	Tspan32 (ENSCGRG00001014505)	Ascl2 (ENSCGRG00001010853)	Th (ENSCGRG00001013316) #25	ENSCGRG00001024085	Igf2 (ENSCGRG00001015458) #26
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000027742	Fgf15 (ENSPEMG00000008128)	Fgf4 (ENSPEMG00000018637)	Fgf3 (ENSPEMG00000030989)	Ano1 (ENSPEMG00000019085)	Fadd (ENSPEMG00000025320)	Ppfia1 (ENSPEMG00000009542)	Cttn (ENSPEMG00000012118)	ENSPEMG00000002175	Shank2 (ENSPEMG00000015203)	Acte1 (ENSPEMG00000011345)	Dhcr7 (ENSPEMG00000018376)	Nadsyn1 (ENSPEMG00000003580)	Mrgpre (ENSPEMG00000002182)	Mrgprg (ENSPEMG00000006356)	Osbpl5 (ENSPEMG00000017884) #22	ENSPEMG00000024612	ENSPEMG00000015893	Cars (ENSPEMG00000009377)	Nap1l4 (ENSPEMG00000008380)	Phlda2 (ENSPEMG00000017657) #23	Slc22a18 (ENSPEMG00000017404)	Cdkn1c (ENSPEMG00000014816)	Kcnq1 (ENSPEMG00000008699)	Trpm5 (ENSPEMG00000017436)	Cd81 (ENSPEMG00000007474)	Tspan32 (ENSPEMG00000008088)	Ascl2 (ENSPEMG00000018213)	Th (ENSPEMG00000018997) #25	ENSPEMG00000001833	ENSPEMG00000018633
Prairie vole	MODERN SPECIES	16	Ccnd1 (ENSMOCG00000013593)	LTO1 (ENSMOCG00000011612)	Fgf15 (ENSMOCG00000020351)	ENSMOCG00000003096	Fgf3 (ENSMOCG00000022933)	Ano1 (ENSMOCG00000014655)	Fadd (ENSMOCG00000021270)	Ppfia1 (ENSMOCG00000006756)	ENSMOCG00000008235	Cttn (ENSMOCG00000016443)	Shank2 (ENSMOCG00000005495)	Acte1 (ENSMOCG00000001514)	Dhcr7 (ENSMOCG00000011891)	Nadsyn1 (ENSMOCG00000015097)	Mrgprg (ENSMOCG00000012347)	Osbpl5 (ENSMOCG00000008055) #22	ENSMOCG00000006021	ENSMOCG00000004531	Cars (ENSMOCG00000020245)	Nap1l4 (ENSMOCG00000012976)	Phlda2 (ENSMOCG00000017066) #23	Slc22a18 (ENSMOCG00000021877)	Cdkn1c (ENSMOCG00000001521)	Kcnq1 (ENSMOCG00000016089)	Trpm5 (ENSMOCG00000013832)	Tssc4 (ENSMOCG00000001908)	ENSMOCG00000020744	Tspan32 (ENSMOCG00000016421)	Ascl2 (ENSMOCG00000003165)	TH (ENSMOCG00000019659) #25	ENSMOCG00000013477
Murinae	ANCESTRAL SPECIES		ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440.b
Mus	ANCESTRAL SPECIES		ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00900000143391
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.a.c	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00900000143391
Mus_B	ANCESTRAL SPECIES		ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440.b	ENSGT00940000160745 #26
Mouse	MODERN SPECIES	16	Ccnd1 (ENSMUSG00000070348)	LTO1 (ENSMUSG00000031072)	Fgf15 (ENSMUSG00000031073)	Fgf4 (ENSMUSG00000050917)	Fgf3 (ENSMUSG00000031074)	Ano1 (ENSMUSG00000031075)	Fadd (ENSMUSG00000031077)	Ppfia1 (ENSMUSG00000037519)	Cttn (ENSMUSG00000031078)	Shank2 (ENSMUSG00000037541)	Acte1 (ENSMUSG00000031085)	Dhcr7 (ENSMUSG00000058454)	Nadsyn1 (ENSMUSG00000031090)	Mrgpre (ENSMUSG00000048965)	Mrgprg (ENSMUSG00000050276)	Osbpl5 (ENSMUSG00000037606) #22	Tnfrsf23 (ENSMUSG00000037613)	Tnfrsf22 (ENSMUSG00000010751)	Tnfrsf26 (ENSMUSG00000045362)	Cars (ENSMUSG00000010755)	Nap1l4 (ENSMUSG00000059119)	Phlda2 (ENSMUSG00000010760) #23	Slc22a18 (ENSMUSG00000000154)	Cdkn1c (ENSMUSG00000037664)	Kcnq1 (ENSMUSG00000009545)	Tssc4 (ENSMUSG00000045752)	Trpm5 (ENSMUSG00000009246)	Cd81 (ENSMUSG00000037706)	Tspan32 (ENSMUSG00000000244)	Ascl2 (ENSMUSG00000009248)	Th (ENSMUSG00000000214) #25
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00930000151070.d.b	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00900000143391	ENSGT00390000015440.b
spretus	MODERN SPECIES	16	LTO1 (MGP_SPRETEiJ_G0031869)	Ccnd1 (MGP_SPRETEiJ_G0031868)	Fgf15 (MGP_SPRETEiJ_G0031867)	Fgf4 (MGP_SPRETEiJ_G0031866)	Fgf3 (MGP_SPRETEiJ_G0031865)	Ano1 (MGP_SPRETEiJ_G0031864)	Fadd (MGP_SPRETEiJ_G0031863)	Ppfia1 (MGP_SPRETEiJ_G0031862)	Cttn (MGP_SPRETEiJ_G0031861)	Shank2 (MGP_SPRETEiJ_G0031860)	Acte1 (MGP_SPRETEiJ_G0031859)	Dhcr7 (MGP_SPRETEiJ_G0031858)	Nadsyn1 (MGP_SPRETEiJ_G0031857)	Mrgpre (MGP_SPRETEiJ_G0031856)	Mrgprg (MGP_SPRETEiJ_G0031855)	Osbpl5 (MGP_SPRETEiJ_G0031854) #22	Tnfrsf26 (MGP_SPRETEiJ_G0031853)	Cars (MGP_SPRETEiJ_G0031852)	Nap1l4 (MGP_SPRETEiJ_G0031851)	Phlda2 (MGP_SPRETEiJ_G0031850) #23	Slc22a18 (MGP_SPRETEiJ_G0031849)	Cdkn1c (MGP_SPRETEiJ_G0031848)	Kcnq1 (MGP_SPRETEiJ_G0031847)	Tssc4 (MGP_SPRETEiJ_G0031846)	Trpm5 (MGP_SPRETEiJ_G0031845)	Cd81 (MGP_SPRETEiJ_G0031844)	Tspan32 (MGP_SPRETEiJ_G0031843)	Ascl2 (MGP_SPRETEiJ_G0031842)	Th (MGP_SPRETEiJ_G0031841) #25	MGP_SPRETEiJ_G0031840	MGP_SPRETEiJ_G0031839
Steppe mouse	MODERN SPECIES	3396	LTO1 (ENSMSIG00000029520)	Fgf15 (ENSMSIG00000029515)	Fgf4 (ENSMSIG00000029514)	Fgf3 (ENSMSIG00000029512)	ENSMSIG00000029509	Ano1 (ENSMSIG00000029432)	Ppfia1 (ENSMSIG00000029361)	Cttn (ENSMSIG00000029316)	Shank2 (ENSMSIG00000029202)	Acte1 (ENSMSIG00000029184)	Dhcr7 (ENSMSIG00000029174)	Nadsyn1 (ENSMSIG00000029170)	Mrgpre (ENSMSIG00000029169)	Mrgprg (ENSMSIG00000029167)	ENSMSIG00000029165	Osbpl5 (ENSMSIG00000029128) #22
Ryukyu mouse	MODERN SPECIES	16	Ccnd1 (MGP_CAROLIEiJ_G0030761)	MGP_CAROLIEiJ_G0030760	Fgf15 (MGP_CAROLIEiJ_G0030759)	Fgf4 (MGP_CAROLIEiJ_G0030758)	Fgf3 (MGP_CAROLIEiJ_G0030757)	Ano1 (MGP_CAROLIEiJ_G0030756)	Fadd (MGP_CAROLIEiJ_G0030755)	Ppfia1 (MGP_CAROLIEiJ_G0030754)	Cttn (MGP_CAROLIEiJ_G0030753)	Shank2 (MGP_CAROLIEiJ_G0030752)	Acte1 (MGP_CAROLIEiJ_G0030751)	Dhcr7 (MGP_CAROLIEiJ_G0030750)	Nadsyn1 (MGP_CAROLIEiJ_G0030749)	Mrgpre (MGP_CAROLIEiJ_G0030748)	Mrgprg (MGP_CAROLIEiJ_G0030747)	Osbpl5 (MGP_CAROLIEiJ_G0030746) #22	MGP_CAROLIEiJ_G0030745	MGP_CAROLIEiJ_G0030744	MGP_CAROLIEiJ_G0030743	Cars (MGP_CAROLIEiJ_G0030742)	Nap1l4 (MGP_CAROLIEiJ_G0030741)	Phlda2 (MGP_CAROLIEiJ_G0030740) #23	Slc22a18 (MGP_CAROLIEiJ_G0030739)	Cdkn1c (MGP_CAROLIEiJ_G0030738)	Kcnq1 (MGP_CAROLIEiJ_G0030737)	Tssc4 (MGP_CAROLIEiJ_G0030736)	Trpm5 (MGP_CAROLIEiJ_G0030735)	Cd81 (MGP_CAROLIEiJ_G0030734)	Tspan32 (MGP_CAROLIEiJ_G0030733)	Ascl2 (MGP_CAROLIEiJ_G0030732)	Th (MGP_CAROLIEiJ_G0030731) #25
Shrew mouse	MODERN SPECIES		Ccnd1 (MGP_PahariEiJ_G0013956)	MGP_PahariEiJ_G0013955	Fgf15 (MGP_PahariEiJ_G0013954)	Fgf4 (MGP_PahariEiJ_G0013953)	Fgf3 (MGP_PahariEiJ_G0013952)	Ano1 (MGP_PahariEiJ_G0013951)	Fadd (MGP_PahariEiJ_G0013950)	Ppfia1 (MGP_PahariEiJ_G0013949)	Cttn (MGP_PahariEiJ_G0013948)	Shank2 (MGP_PahariEiJ_G0013947)	Acte1 (MGP_PahariEiJ_G0013946)	MGP_PahariEiJ_G0013945	Nadsyn1 (MGP_PahariEiJ_G0013944)	Mrgpre (MGP_PahariEiJ_G0013943)	Mrgprg (MGP_PahariEiJ_G0013942)	Osbpl5 (MGP_PahariEiJ_G0013941) #22	MGP_PahariEiJ_G0013940	Tnfrsf26 (MGP_PahariEiJ_G0013939)	Cars (MGP_PahariEiJ_G0013938)	Nap1l4 (MGP_PahariEiJ_G0013937)	Phlda2 (MGP_PahariEiJ_G0013936) #23	Slc22a18 (MGP_PahariEiJ_G0013935)	Cdkn1c (MGP_PahariEiJ_G0013934)	Kcnq1 (MGP_PahariEiJ_G0013933)	Tssc4 (MGP_PahariEiJ_G0013932)	Trpm5 (MGP_PahariEiJ_G0013931)	Cd81 (MGP_PahariEiJ_G0013930)	Tspan32 (MGP_PahariEiJ_G0013929)	Ascl2 (MGP_PahariEiJ_G0013928)	Th (MGP_PahariEiJ_G0013927) #25	MGP_PahariEiJ_G0013926
Rat	MODERN SPECIES		Fgf19 (ENSRNOG00000020899)	Fgf4 (ENSRNOG00000020890)	Fgf3 (ENSRNOG00000020888)	Ano1 (ENSRNOG00000020865)	Fadd (ENSRNOG00000047035)	ENSRNOG00000029588	Ppfia1 (ENSRNOG00000020857)	Cttn (ENSRNOG00000050994)	Shank2 (ENSRNOG00000050206)	LOC102552318 (ENSRNOG00000059303)	Dhcr7 (ENSRNOG00000020776)	Nadsyn1 (ENSRNOG00000020736)	Mrgpre (ENSRNOG00000065330)	Mrgprg (ENSRNOG00000069807)	RGD1562011 (ENSRNOG00000061525)	Osbpl5 (ENSRNOG00000020713) #22	Tnfrsf22 (ENSRNOG00000070689)	Tnfrsf26 (ENSRNOG00000043486)	Cars1 (ENSRNOG00000020651)	Nap1l4 (ENSRNOG00000020615)	Phlda2 (ENSRNOG00000020614) #23	Slc22a18 (ENSRNOG00000020562)	Cdkn1c (ENSRNOG00000059500)	Kcnq1 (ENSRNOG00000020532)	Trpm5 (ENSRNOG00000020484)	Cd81 (ENSRNOG00000020451)	Tssc4 (ENSRNOG00000032677)	Tspan32 (ENSRNOG00000026039)	Ascl2 (ENSRNOG00000020434)	Th (ENSRNOG00000020410) #25	Ins2 (ENSRNOG00000020405)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1064															Mrgpre (ENSNGAG00000022614)	Osbpl5 (ENSNGAG00000023994) #22	ENSNGAG00000012833	ENSNGAG00000018385	ENSNGAG00000015001	Nap1l4 (ENSNGAG00000023859)	Phlda2 (ENSNGAG00000013190) #23	Slc22a18 (ENSNGAG00000021706)	Cdkn1c (ENSNGAG00000022471)	Kcnq1 (ENSNGAG00000015164)	Trpm5 (ENSNGAG00000020044)	Tssc4 (ENSNGAG00000024061)	ENSNGAG00000024276	Tspan32 (ENSNGAG00000019474)	Ascl2 (ENSNGAG00000021681)	Th (ENSNGAG00000024133) #25	ENSNGAG00000015581
Lesser Egyptian jerboa	MODERN SPECIES	53		ENSJJAG00000023706	Ccnd1 (ENSJJAG00000023518)	LTO1 (ENSJJAG00000022000)	Fgf15 (ENSJJAG00000015750)	Fgf4 (ENSJJAG00000012092)	Fgf3 (ENSJJAG00000021121)	Ano1 (ENSJJAG00000021888)	Fadd (ENSJJAG00000015124)	Ppfia1 (ENSJJAG00000024383)	Cttn (ENSJJAG00000013444)	Shank2 (ENSJJAG00000015229)	Acte1 (ENSJJAG00000000416)	Dhcr7 (ENSJJAG00000017191)	Nadsyn1 (ENSJJAG00000012419)	Osbpl5 (ENSJJAG00000020113) #22	Cars (ENSJJAG00000022992)	Nap1l4 (ENSJJAG00000001786)	Phlda2 (ENSJJAG00000020453) #23	Slc22a18 (ENSJJAG00000013550)	Cdkn1c (ENSJJAG00000024035)	Kcnq1 (ENSJJAG00000023652)	Trpm5 (ENSJJAG00000012753)	ENSJJAG00000004201	Tspan32 (ENSJJAG00000018126)	ENSJJAG00000018834	Ascl2 (ENSJJAG00000002243)	Th (ENSJJAG00000012231) #25	ENSJJAG00000012396	Igf2 (ENSJJAG00000014388) #26	Mrpl23 (ENSJJAG00000003519)
Kangaroo rat	MODERN SPECIES	373	Mrpl21 (ENSDORG00000025967)	Ighmbp2 (ENSDORG00000026350)	Mrgprd (ENSDORG00000023697)	Mrgprf (ENSDORG00000009826)	Tpcn2 (ENSDORG00000002980)	ENSDORG00000029122	LTO1 (ENSDORG00000012520)	ENSDORG00000024888	Ano1 (ENSDORG00000009084)	Ppfia1 (ENSDORG00000016082)	Cttn (ENSDORG00000009315)	Shank2 (ENSDORG00000011912)	Dhcr7 (ENSDORG00000026094)	Nadsyn1 (ENSDORG00000014370)	Mrgpre (ENSDORG00000015977)	Osbpl5 (ENSDORG00000011403) #22	ENSDORG00000029883	Cars (ENSDORG00000003786)	Nap1l4 (ENSDORG00000016630)	Phlda2 (ENSDORG00000016629) #23	Slc22a18 (ENSDORG00000027634)	Kcnq1 (ENSDORG00000004723)	Trpm5 (ENSDORG00000001508)	ENSDORG00000025519	ENSDORG00000001506	Tspan32 (ENSDORG00000011426)	Th (ENSDORG00000010289) #25	ENSDORG00000023976	Igf2 (ENSDORG00000023345) #26	Mrpl23 (ENSDORG00000027504)	Tnnt3 (ENSDORG00000002036)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769	ENSGT00940000167688
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26	ENSGT00390000007739
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT01030000234639.A.b.a.a	ENSGT00940000159763	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000159535 #22	ENSGT00930000151070.d.a	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000160745 #26
Long-tailed chinchilla	MODERN SPECIES	129	MRGPRF (ENSCLAG00000016323)	TPCN2 (ENSCLAG00000016178)	CCND1 (ENSCLAG00000014981)	LTO1 (ENSCLAG00000014111)	FGF19 (ENSCLAG00000015041)	ENSCLAG00000014848	FGF3 (ENSCLAG00000015995)	ANO1 (ENSCLAG00000015936)	FADD (ENSCLAG00000015722)	PPFIA1 (ENSCLAG00000015977)	CTTN (ENSCLAG00000016832)	SHANK2 (ENSCLAG00000017262)	ENSCLAG00000016369	DHCR7 (ENSCLAG00000015513)	NADSYN1 (ENSCLAG00000016090)	OSBPL5 (ENSCLAG00000015702) #22	ENSCLAG00000016141	ENSCLAG00000015017	CARS1 (ENSCLAG00000015379)	NAP1L4 (ENSCLAG00000015463)	PHLDA2 (ENSCLAG00000013737) #23	SLC22A18 (ENSCLAG00000015366)	KCNQ1 (ENSCLAG00000016386)	TRPM5 (ENSCLAG00000015080)	TSSC4 (ENSCLAG00000015219)	CD81 (ENSCLAG00000015223)	TSPAN32 (ENSCLAG00000016450)	ASCL2 (ENSCLAG00000016372)	TH (ENSCLAG00000015576) #25	INS (ENSCLAG00000015849)	IGF2 (ENSCLAG00000014134) #26
Degu	MODERN SPECIES	59	CCND1 (ENSODEG00000017314)	LTO1 (ENSODEG00000017276)	FGF19 (ENSODEG00000017850)	FGF4 (ENSODEG00000017332)	FGF3 (ENSODEG00000017350)	ENSODEG00000017320	ENSODEG00000017541	ENSODEG00000020446	PPFIA1 (ENSODEG00000017203)	CTTN (ENSODEG00000017283)	SHANK2 (ENSODEG00000018120)	ENSODEG00000017405	ENSODEG00000020450	DHCR7 (ENSODEG00000017100)	ENSODEG00000017514	OSBPL5 (ENSODEG00000017355) #22	ENSODEG00000017356	ENSODEG00000020407	ENSODEG00000017343	CARS1 (ENSODEG00000017246)	ENSODEG00000017160	ENSODEG00000017602 #23	SLC22A18 (ENSODEG00000017345)	CDKN1C (ENSODEG00000017263)	ENSODEG00000020462	KCNQ1 (ENSODEG00000017184)	TRPM5 (ENSODEG00000017210)	ENSODEG00000017309	TSPAN32 (ENSODEG00000017230)	ASCL2 (ENSODEG00000017151)	ENSODEG00000020432
Guinea pig	MODERN SPECIES	42	CCND1 (ENSCPOG00000032886)	LTO1 (ENSCPOG00000031028)	FGF19 (ENSCPOG00000008147)	FGF4 (ENSCPOG00000013920)	FGF3 (ENSCPOG00000007355)	ANO1 (ENSCPOG00000011005)	FADD (ENSCPOG00000011290)	PPFIA1 (ENSCPOG00000005552)	CTTN (ENSCPOG00000005562)	SHANK2 (ENSCPOG00000009737)	ENSCPOG00000022995	DHCR7 (ENSCPOG00000011633)	NADSYN1 (ENSCPOG00000015147)	MRGPRE (ENSCPOG00000004420)	ENSCPOG00000002584	OSBPL5 (ENSCPOG00000015032) #22	CARS1 (ENSCPOG00000005087)	NAP1L4 (ENSCPOG00000026000)	PHLDA2 (ENSCPOG00000007595) #23	SLC22A18 (ENSCPOG00000023438)	KCNQ1 (ENSCPOG00000004952)	TRPM5 (ENSCPOG00000010253)	ENSCPOG00000037561	CD81 (ENSCPOG00000010241)	TSPAN32 (ENSCPOG00000020601)	ASCL2 (ENSCPOG00000035275)	ENSCPOG00000038059	TH (ENSCPOG00000012591) #25	INS (ENSCPOG00000031250)	IGF2 (ENSCPOG00000038983) #26	ENSCPOG00000035162
Naked mole-rat female	MODERN SPECIES	14	CCND1 (ENSHGLG00000039478)	ORAOV1 (ENSHGLG00000041285)	FGF19 (ENSHGLG00000049791)	FGF4 (ENSHGLG00000008219)	FGF3 (ENSHGLG00000006943)	ANO1 (ENSHGLG00000018162)	FADD (ENSHGLG00000038686)	PPFIA1 (ENSHGLG00000013241)	CTTN (ENSHGLG00000011727)	SHANK2 (ENSHGLG00000012313)	ENSHGLG00000046722	ENSHGLG00000013700	DHCR7 (ENSHGLG00000012353)	NADSYN1 (ENSHGLG00000010490)	ENSHGLG00000042806	OSBPL5 (ENSHGLG00000009680) #22	ENSHGLG00000036263	CARS (ENSHGLG00000010898)	NAP1L4 (ENSHGLG00000008836)	PHLDA2 (ENSHGLG00000035203) #23	SLC22A18 (ENSHGLG00000011443)	ENSHGLG00000032945	KCNQ1 (ENSHGLG00000016045)	ENSHGLG00000041039	TRPM5 (ENSHGLG00000014492)	TSSC4 (ENSHGLG00000014018)	CD81 (ENSHGLG00000013387)	ENSHGLG00000047991	TSPAN32 (ENSHGLG00000006428)	ASCL2 (ENSHGLG00000013994)	TH (ENSHGLG00000019013) #25
Sciuridae	ANCESTRAL SPECIES	22	ENSGT01070000254034	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00920000150769	ENSGT00940000167688
Marmotini	ANCESTRAL SPECIES	6	ENSGT01070000254034	ENSGT00940000157816	ENSGT00390000009426	ENSGT00940000160601	ENSGT00940000158825	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25	ENSGT00390000015440	ENSGT00940000167688	ENSGT00940000160745 #26
Marmotini_b	ANCESTRAL SPECIES	209												ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.a.b	ENSGT01030000234639.A.b.a.b.a.a.a.a	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000162677	ENSGT00940000161001	ENSGT00940000160588	ENSGT00390000011846	ENSGT00940000158805.a	ENSGT00390000003287	ENSGT00940000163041	ENSGT00950000182885.C.a #25
Arctic ground squirrel	MODERN SPECIES	490											ENSUPAG00010021692	DHCR7 (ENSUPAG00010021683)	NADSYN1 (ENSUPAG00010021674)	MRGPRE (ENSUPAG00010021672)	MRGPRG (ENSUPAG00010021671)	OSBPL5 (ENSUPAG00010021654) #22	CARS1 (ENSUPAG00010021631)	NAP1L4 (ENSUPAG00010021588)	PHLDA2 (ENSUPAG00010021584) #23	SLC22A18 (ENSUPAG00010021583)	ENSUPAG00010021580	KCNQ1 (ENSUPAG00010021544)	TRPM5 (ENSUPAG00010021528)	TSSC4 (ENSUPAG00010021525)	CD81 (ENSUPAG00010021522)	TSPAN32 (ENSUPAG00010021427)	ASCL2 (ENSUPAG00010021416)	TH (ENSUPAG00010021400) #25
Squirrel	MODERN SPECIES	394													ENSSTOG00000029451	NADSYN1 (ENSSTOG00000001522)	MRGPRE (ENSSTOG00000021328)	OSBPL5 (ENSSTOG00000024630) #22	CARS1 (ENSSTOG00000010545)	NAP1L4 (ENSSTOG00000014135)	SLC22A18 (ENSSTOG00000022973)	ENSSTOG00000034490	KCNQ1 (ENSSTOG00000027060)	TRPM5 (ENSSTOG00000021454)	CD81 (ENSSTOG00000000251)	TSPAN32 (ENSSTOG00000022426)	ASCL2 (ENSSTOG00000028167)	TH (ENSSTOG00000026422) #25
Alpin marmot	MODERN SPECIES	86	TPCN2 (ENSMMMG00000001627)	ENSMMMG00000003260	ENSMMMG00000003262	LTO1 (ENSMMMG00000003272)	FGF19 (ENSMMMG00000003282)	FGF4 (ENSMMMG00000003298)	FGF3 (ENSMMMG00000003325)	ANO1 (ENSMMMG00000003366)	FADD (ENSMMMG00000003409)	PPFIA1 (ENSMMMG00000003424)	CTTN (ENSMMMG00000003602)	SHANK2 (ENSMMMG00000003690)	DHCR7 (ENSMMMG00000004168)	NADSYN1 (ENSMMMG00000004190)	MRGPRG (ENSMMMG00000004231)	OSBPL5 (ENSMMMG00000004241) #22	CARS1 (ENSMMMG00000004312)	NAP1L4 (ENSMMMG00000004457)	PHLDA2 (ENSMMMG00000004541) #23	SLC22A18 (ENSMMMG00000004552)	KCNQ1 (ENSMMMG00000004570)	TRPM5 (ENSMMMG00000004649)	ENSMMMG00000004686	CD81 (ENSMMMG00000004698)	TSPAN32 (ENSMMMG00000004716)	ASCL2 (ENSMMMG00000004832)	ENSMMMG00000004835 #25	ENSMMMG00000004847	INS (ENSMMMG00000004855)	IGF2 (ENSMMMG00000004868) #26	ENSMMMG00000004892
Eurasian red squirrel	MODERN SPECIES	2	FGF19 (ENSSVLG00005022961)	FGF4 (ENSSVLG00005022938)	FGF3 (ENSSVLG00005022895)	ANO1 (ENSSVLG00005021586)	ENSSVLG00005021335	ENSSVLG00005021293	PPFIA1 (ENSSVLG00005020857)	CTTN (ENSSVLG00005020806)	ENSSVLG00005020779	SHANK2 (ENSSVLG00005020334)	ENSSVLG00005020240	DHCR7 (ENSSVLG00005020210)	NADSYN1 (ENSSVLG00005020150)	MRGPRE (ENSSVLG00005020125)	MRGPRG (ENSSVLG00005020102)	OSBPL5 (ENSSVLG00005019976) #22	CARS1 (ENSSVLG00005019869)	NAP1L4 (ENSSVLG00005019775)	PHLDA2 (ENSSVLG00005019643) #23	SLC22A18 (ENSSVLG00005019588)	ENSSVLG00005019445	KCNQ1 (ENSSVLG00005019353)	TRPM5 (ENSSVLG00005018706)	TSSC4 (ENSSVLG00005018667)	CD81 (ENSSVLG00005018575)	TSPAN32 (ENSSVLG00005018471)	ASCL2 (ENSSVLG00005018445)	TH (ENSSVLG00005018203) #25	ENSSVLG00005018163	ENSSVLG00005018115	INS (ENSSVLG00005018076)
Lagomorpha	ANCESTRAL SPECIES	496																ENSGT00940000159535 #22	ENSGT00940000174432	ENSGT00940000153362.b
Rabbit	MODERN SPECIES	922																ENSOCUG00000024700 #22	ENSOCUG00000038219	NAP1L4 (ENSOCUG00000005624)
Atlantogenata	ANCESTRAL SPECIES	171													ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000161001
Afrotheria	ANCESTRAL SPECIES	210												ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000161001
Afrotheria_a	ANCESTRAL SPECIES	210												ENSGT00940000163884	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT01030000234639.A.b.a.b.a.a.b	ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000161001
Elephant	MODERN SPECIES	119								ENSLAFG00000031144	DHCR7 (ENSLAFG00000005674)	NADSYN1 (ENSLAFG00000030417)	ENSLAFG00000025899	ENSLAFG00000031027	ENSLAFG00000031472	ENSLAFG00000026783	ENSLAFG00000030153	OSBPL5 (ENSLAFG00000022174) #22	CARS1 (ENSLAFG00000005612)	NAP1L4 (ENSLAFG00000005602)	SLC22A18 (ENSLAFG00000032777)
Hyrax	MODERN SPECIES	1157																ENSPCAG00000001725 #22
Tenrec	MODERN SPECIES	1201																OSBPL5 (ENSETEG00000017366) #22
Xenarthra	ANCESTRAL SPECIES	1196																ENSGT00940000159535 #22	ENSGT00390000006347.a	ENSGT00940000153362.b	ENSGT00940000160333
Armadillo	MODERN SPECIES	1720																OSBPL5 (ENSDNOG00000024849) #22	CARS1 (ENSDNOG00000036887)	NAP1L4 (ENSDNOG00000040144)	SLC22A18 (ENSDNOG00000030650)
Platypus	MODERN SPECIES	14	PPP1CA (ENSOANG00000011413)	RAD9A (ENSOANG00000011414)	ENSOANG00000046031	ENSOANG00000038827	SSH3 (ENSOANG00000039995)	ANKRD13D (ENSOANG00000044186)	GRK2 (ENSOANG00000037510)	KDM2A (ENSOANG00000005993)	ENSOANG00000040700	ENSOANG00000015174	ENSOANG00000043730	ENSOANG00000043368	ENSOANG00000005851	ENSOANG00000037515	ENSOANG00000008824	OSBPL5 (ENSOANG00000044131) #22	ENSOANG00000048208	CARS1 (ENSOANG00000040595)	NAP1L4 (ENSOANG00000040762)	PHLDA2 (ENSOANG00000010715) #23	ENSOANG00000032218	ENSOANG00000047129	KCNQ1 (ENSOANG00000050832)	TRPM5 (ENSOANG00000021626)	ENSOANG00000044471	ENSOANG00000040652	ENSOANG00000046586	TH (ENSOANG00000043924) #25	ENSOANG00000044716	IGF2 (ENSOANG00000047292) #26	ENSOANG00000040067
Anura	ANCESTRAL SPECIES	26	ENSGT00390000000263	ENSGT00940000157155	ENSGT00390000015492.B	ENSGT00530000063106.A	ENSGT00950000183063.c.b.b	ENSGT00950000183063.c.b.a	ENSGT00940000157673	ENSGT00940000164152	ENSGT00940000157183.b	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000166623	ENSGT00940000154694	ENSGT00390000010302	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00730000110943.C	ENSGT00940000165248	ENSGT01030000234598.a.a.a	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01070000257277	ENSGT00940000164175.a.a.d	ENSGT00940000164175.a.b	ENSGT00940000164175.b	ENSGT00950000183084.b.b	ENSGT00510000047914.b	ENSGT00940000156311	ENSGT00940000156022.b	ENSGT00390000001652.f.b
Leishan spiny toad	MODERN SPECIES	1	AGBL2 (ENSLLEG00000025192)	FNBP4 (ENSLLEG00000025466)	NUP160 (ENSLLEG00000025631)	ENSLLEG00000025845	ENSLLEG00000025893	ENSLLEG00000025966	EXT2 (ENSLLEG00000026298)	ENSLLEG00000026382	ENSLLEG00000026394	ALX4 (ENSLLEG00000026424)	ENSLLEG00000026456	ENSLLEG00000026475	ENSLLEG00000026496	CD82 (ENSLLEG00000026529)	ENSLLEG00000026615 #21	OSBPL5 (ENSLLEG00000026745) #22	ENSLLEG00000026916	ENSLLEG00000026929	ENSLLEG00000026965	CARS1 (ENSLLEG00000027019)	NAP1L4 (ENSLLEG00000027562)	PHLDA2 (ENSLLEG00000027944) #23	SLC22A18 (ENSLLEG00000027976)	ENSLLEG00000028055	ENSLLEG00000028115	ENSLLEG00000028200	SYT13 (ENSLLEG00000028608)	ENSLLEG00000028636	PRDM11 (ENSLLEG00000028650)	ENSLLEG00000028686	ENSLLEG00000028705
Coelacanth	MODERN SPECIES	618															ENSLACG00000016092 #21	OSBPL5 (ENSLACG00000015566) #22	CARS1 (ENSLACG00000015244)	NAP1L4 (ENSLACG00000014959)	PHLDA2 (ENSLACG00000014725) #23	ENSLACG00000013848	KCNQ1 (ENSLACG00000008661)	TRPM5 (ENSLACG00000004535)	PTDSS2 (ENSLACG00000001842)	ENSLACG00000022573