Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000154742.b	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT01050000246247 #32	ENSGT00940000170540	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT01050000246247 #32	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Suina	ANCESTRAL SPECIES	11	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026.f #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT01050000246247 #32	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Pig	MODERN SPECIES	10	GCNT4 (ENSSSCG00000029710) #7	ENSSSCG00000014078 #8	ANKRD31 (ENSSSCG00000014079) #9	HMGCR (ENSSSCG00000014080) #10	CERT1 (ENSSSCG00000014081) #11	ENSSSCG00000058855 #12	POLK (ENSSSCG00000014082) #13	ANKDD1B (ENSSSCG00000014083) #14	POC5 (ENSSSCG00000014084) #15	SV2C (ENSSSCG00000034062) #16	IQGAP2 (ENSSSCG00000014088) #17	ENSSSCG00000045040 #18	F2RL2 (ENSSSCG00000037582) #19	F2R (ENSSSCG00000035355) #20	F2RL1 (ENSSSCG00000014091) #21	S100Z (ENSSSCG00000014092) #22	CRHBP (ENSSSCG00000014093) #23	AGGF1 (ENSSSCG00000014094) #24	ENSSSCG00000050058 #25	PDE8B (ENSSSCG00000014097) #26	ENSSSCG00000014096 #27	ENSSSCG00000051837 #28	ENSSSCG00000014098 #29	OTP (ENSSSCG00000014099) #30	TBCA (ENSSSCG00000014100) #31	ENSSSCG00000034241 #32	AP3B1 (ENSSSCG00000014101) #33	SCAMP1 (ENSSSCG00000034795) #34	LHFPL2 (ENSSSCG00000028536) #35	ARSB (ENSSSCG00000038535) #36	DMGDH (ENSSSCG00000014110) #37
Chacoan peccary	MODERN SPECIES	204						HMGCR (ENSCWAG00000003368) #10	CERT1 (ENSCWAG00000003403) #11	POLK (ENSCWAG00000003477) #13	ANKDD1B (ENSCWAG00000003540) #14	POC5 (ENSCWAG00000003563) #15	SV2C (ENSCWAG00000003605) #16	IQGAP2 (ENSCWAG00000003644) #17	F2RL2 (ENSCWAG00000007970) #19	F2R (ENSCWAG00000008004) #20	F2RL1 (ENSCWAG00000008039) #21	ENSCWAG00000008077 #22	CRHBP (ENSCWAG00000008117) #23	AGGF1 (ENSCWAG00000008243) #24	ZBED3 (ENSCWAG00000008305)	PDE8B (ENSCWAG00000008441) #26	WDR41 (ENSCWAG00000010043) #29	OTP (ENSCWAG00000010193) #30	TBCA (ENSCWAG00000010250) #31	AP3B1 (ENSCWAG00000010356) #33	SCAMP1 (ENSCWAG00000010485) #34	LHFPL2 (ENSCWAG00000010566) #35	ARSB (ENSCWAG00000010599) #36	DMGDH (ENSCWAG00000010632) #37	BHMT2 (ENSCWAG00000010749)	BHMT (ENSCWAG00000010882)	JMY (ENSCWAG00000010992)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Camelidae	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a	ENSGT00390000018706.n	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Alpaca	MODERN SPECIES	5935															F2RL1 (ENSVPAG00000001070) #21	ENSVPAG00000001069 #22
Arabian camel	MODERN SPECIES	22	ENSCDRG00005002639	FAM169A (ENSCDRG00005002601)	ENSCDRG00005002592	GCNT4 (ENSCDRG00005002583) #7	ANKRD31 (ENSCDRG00005002546) #9	HMGCR (ENSCDRG00005002491) #10	CERT1 (ENSCDRG00005001455) #11	POLK (ENSCDRG00005001206) #13	ANKDD1B (ENSCDRG00005001160) #14	POC5 (ENSCDRG00005001127) #15	SV2C (ENSCDRG00005001113) #16	F2RL2 (ENSCDRG00005001095) #19	IQGAP2 (ENSCDRG00005000766) #17	F2R (ENSCDRG00005000707) #20	F2RL1 (ENSCDRG00005000688) #21	S100Z (ENSCDRG00005000678) #22	ENSCDRG00005000661	CRHBP (ENSCDRG00005000645) #23	AGGF1 (ENSCDRG00005000618) #24	ZBED3 (ENSCDRG00005000608)	PDE8B (ENSCDRG00005000565) #26	WDR41 (ENSCDRG00005000509) #29	OTP (ENSCDRG00005000470) #30	TBCA (ENSCDRG00005000444) #31	AP3B1 (ENSCDRG00005000366) #33	SCAMP1 (ENSCDRG00005000299) #34	LHFPL2 (ENSCDRG00005000275) #35	ARSB (ENSCDRG00005000234) #36	DMGDH (ENSCDRG00005000085) #37	BHMT2 (ENSCDRG00005000037)	BHMT (ENSCDRG00005019118)
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Caprinae	ANCESTRAL SPECIES	30	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	23	CPLX2 (ENSOARG00020020263)	HRH2 (ENSOARG00020020329)	SFXN1 (ENSOARG00020020382)	ENSOARG00020020572	GCNT4 (ENSOARG00020020622) #7	ENSOARG00020020636 #9	HMGCR (ENSOARG00020020760) #10	CERT1 (ENSOARG00020020967) #11	POLK (ENSOARG00020021498) #13	POC5 (ENSOARG00020021712) #15	SV2C (ENSOARG00020021763) #16	IQGAP2 (ENSOARG00020021962) #17	F2RL2 (ENSOARG00020022973) #19	F2R (ENSOARG00020022990) #20	F2RL1 (ENSOARG00020023002) #21	S100Z (ENSOARG00020023021) #22	CRHBP (ENSOARG00020023047) #23	AGGF1 (ENSOARG00020023108) #24	ZBED3 (ENSOARG00020023150)	PDE8B (ENSOARG00020023251) #26	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #29	OTP (ENSOARG00020024451) #30	TBCA (ENSOARG00020024464) #31	AP3B1 (ENSOARG00020024527) #33	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #34	ENSOARG00020024626 #22	LHFPL2 (ENSOARG00020024639) #35	ARSB (ENSOARG00020002992) #36	DMGDH (ENSOARG00020003036) #37
Rambouillet Sheep	MODERN SPECIES	23	F2RL2 (ENSOARG00020022973) #19	F2R (ENSOARG00020022990) #20	F2RL1 (ENSOARG00020023002) #21	S100Z (ENSOARG00020023021) #22	CRHBP (ENSOARG00020023047) #23	AGGF1 (ENSOARG00020023108) #24	ZBED3 (ENSOARG00020023150)	PDE8B (ENSOARG00020023251) #26	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #29	OTP (ENSOARG00020024451) #30	TBCA (ENSOARG00020024464) #31	AP3B1 (ENSOARG00020024527) #33	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #34	ENSOARG00020024626 #22	LHFPL2 (ENSOARG00020024639) #35	ARSB (ENSOARG00020002992) #36	DMGDH (ENSOARG00020003036) #37	BHMT (ENSOARG00020003124)	JMY (ENSOARG00020003148)	HOMER1 (ENSOARG00020003237)	TENT2 (ENSOARG00020003488)	CMYA5 (ENSOARG00020003611)	MTX3 (ENSOARG00020004194)	THBS4 (ENSOARG00020004359)	SERINC5 (ENSOARG00020004451)	GNPNAT1 (ENSOARG00020004685)	STYX (ENSOARG00020004723)	ENSOARG00020004750	PSMC6 (ENSOARG00020004771)
Goat	MODERN SPECIES	1	SFXN1 (ENSCHIG00000022473)	DRD1 (ENSCHIG00000024371)	ENSCHIG00000015735	GCNT4 (ENSCHIG00000008602) #7	ENSCHIG00000021264 #9	HMGCR (ENSCHIG00000015556) #10	CERT1 (ENSCHIG00000021950) #11	POLK (ENSCHIG00000008105) #13	ENSCHIG00000008486	POC5 (ENSCHIG00000009080) #15	SV2C (ENSCHIG00000016655) #16	F2RL2 (ENSCHIG00000002096) #19	IQGAP2 (ENSCHIG00000020854) #17	F2R (ENSCHIG00000022474) #20	F2RL1 (ENSCHIG00000026366) #21	S100Z (ENSCHIG00000018486) #22	CRHBP (ENSCHIG00000024251) #23	AGGF1 (ENSCHIG00000012662) #24	ZBED3 (ENSCHIG00000004171)	PDE8B (ENSCHIG00000023152) #26	WDR41 (ENSCHIG00000023139) #29	OTP (ENSCHIG00000018904) #30	TBCA (ENSCHIG00000021233) #31	AP3B1 (ENSCHIG00000018755) #33	ENSCHIG00000026947	SCAMP1 (ENSCHIG00000025008) #34	LHFPL2 (ENSCHIG00000014180) #35	ARSB (ENSCHIG00000001349) #36	DMGDH (ENSCHIG00000021924) #37	BHMT2 (ENSCHIG00000027021)	BHMT (ENSCHIG00000009078)
Bovinae	ANCESTRAL SPECIES	33	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00390000001830.j	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Bos	ANCESTRAL SPECIES	31	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Bos_b	ANCESTRAL SPECIES	28	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
Hybrid Bos Indicus	MODERN SPECIES	1					GCNT4 (ENSBIXG00005011458) #7	ANKRD31 (ENSBIXG00005011423) #9	HMGCR (ENSBIXG00005011318) #10	CERT1 (ENSBIXG00005011247) #11	POLK (ENSBIXG00005011147) #13	POC5 (ENSBIXG00005010780) #15	SV2C (ENSBIXG00005010694) #16	ENSBIXG00005007521	IQGAP2 (ENSBIXG00005010623) #17	F2RL2 (ENSBIXG00005010387) #19	F2R (ENSBIXG00005000862) #20	S100Z (ENSBIXG00005010347) #22	CRHBP (ENSBIXG00005000840) #23	AGGF1 (ENSBIXG00005010286) #24	ENSBIXG00005010267	PDE8B (ENSBIXG00005010189) #26	ENSBIXG00005000677	WDR41 (ENSBIXG00005009893) #29	OTP (ENSBIXG00005009799) #30	TBCA (ENSBIXG00005000599) #31	ENSBIXG00005009736	AP3B1 (ENSBIXG00005009658) #33	ENSBIXG00005009460	SCAMP1 (ENSBIXG00005009438) #34	ARSB (ENSBIXG00005009357) #36	ENSBIXG00005009344	DMGDH (ENSBIXG00005009320) #37
Cow	MODERN SPECIES	1	HRH2 (ENSBTAG00000044071)	SFXN1 (ENSBTAG00000014536)	DRD1 (ENSBTAG00000047719)	GCNT4 (ENSBTAG00000050091) #7	ANKRD31 (ENSBTAG00000024878) #9	HMGCR (ENSBTAG00000007840) #10	CERT1 (ENSBTAG00000000081) #11	POLK (ENSBTAG00000004028) #13	POC5 (ENSBTAG00000007114) #15	SV2C (ENSBTAG00000017507) #16	ENSBTAG00000052974	IQGAP2 (ENSBTAG00000000897) #17	F2RL2 (ENSBTAG00000000898) #19	F2R (ENSBTAG00000020199) #20	F2RL1 (ENSBTAG00000034848) #21	S100Z (ENSBTAG00000020201) #22	CRHBP (ENSBTAG00000020202) #23	AGGF1 (ENSBTAG00000034823) #24	ZBED3 (ENSBTAG00000052845)	PDE8B (ENSBTAG00000020205) #26	WDR41 (ENSBTAG00000020212) #29	OTP (ENSBTAG00000009249) #30	TBCA (ENSBTAG00000003263) #31	ENSBTAG00000052130	AP3B1 (ENSBTAG00000005016) #33	SCAMP1 (ENSBTAG00000007371) #34	LHFPL2 (ENSBTAG00000007374) #35	ARSB (ENSBTAG00000008341) #36	DMGDH (ENSBTAG00000002110) #37	BHMT2 (ENSBTAG00000038234)	BHMT (ENSBTAG00000002255)
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00730000111121 #24	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a	ENSGT00940000156354
Domestic yak	MODERN SPECIES	2	DRD1 (ENSBGRG00000011292)	GCNT4 (ENSBGRG00000011247) #7	ENSBGRG00000011228	ANKRD31 (ENSBGRG00000010828) #9	HMGCR (ENSBGRG00000010597) #10	CERT1 (ENSBGRG00000009779) #11	POLK (ENSBGRG00000009306) #13	POC5 (ENSBGRG00000008737) #15	SV2C (ENSBGRG00000008621) #16	ENSBGRG00000008593	F2RL2 (ENSBGRG00000008567) #19	IQGAP2 (ENSBGRG00000007931) #17	F2R (ENSBGRG00000007892) #20	F2RL1 (ENSBGRG00000007822) #21	ENSBGRG00000007803	S100Z (ENSBGRG00000007761) #22	ENSBGRG00000007739	AGGF1 (ENSBGRG00000007412) #24	ZBED3 (ENSBGRG00000007380)	PDE8B (ENSBGRG00000006555) #26	WDR41 (ENSBGRG00000006363) #29	OTP (ENSBGRG00000006298) #30	TBCA (ENSBGRG00000006236) #31	ENSBGRG00000006222	AP3B1 (ENSBGRG00000006021) #33	SCAMP1 (ENSBGRG00000005900) #34	LHFPL2 (ENSBGRG00000005875) #35	ENSBGRG00000005848	ARSB (ENSBGRG00000005773) #36	DMGDH (ENSBGRG00000005663) #37	ENSBGRG00000005598
Wild yak	MODERN SPECIES	297				GCNT4 (ENSBMUG00000012260) #7	ANKRD31 (ENSBMUG00000012237) #9	HMGCR (ENSBMUG00000012171) #10	CERT1 (ENSBMUG00000011873) #11	POLK (ENSBMUG00000011634) #13	POC5 (ENSBMUG00000011568) #15	SV2C (ENSBMUG00000011496) #16	ENSBMUG00000011462	F2RL2 (ENSBMUG00000011445) #19	IQGAP2 (ENSBMUG00000011350) #17	F2R (ENSBMUG00000011164) #20	F2RL1 (ENSBMUG00000011152) #21	S100Z (ENSBMUG00000011148) #22	AGGF1 (ENSBMUG00000011125) #24	PDE8B (ENSBMUG00000011054) #26	WDR41 (ENSBMUG00000010747) #29	OTP (ENSBMUG00000010682) #30	TBCA (ENSBMUG00000010673) #31	ENSBMUG00000010660	ENSBMUG00000010637
American bison	MODERN SPECIES	3169	ENSBBBG00000005945	ENSBBBG00000022510	GCNT4 (ENSBBBG00000005939) #7	ANKRD31 (ENSBBBG00000022499) #9	HMGCR (ENSBBBG00000005907) #10	CERT1 (ENSBBBG00000022291) #11	POLK (ENSBBBG00000021965) #13	ANKDD1B (ENSBBBG00000008030) #14	POC5 (ENSBBBG00000021773) #15	SV2C (ENSBBBG00000006918) #16	ENSBBBG00000021689	IQGAP2 (ENSBBBG00000021677) #17	F2RL2 (ENSBBBG00000021481) #19	F2R (ENSBBBG00000021478) #20	F2RL1 (ENSBBBG00000021471) #21	S100Z (ENSBBBG00000021469) #22	CRHBP (ENSBBBG00000021464) #23	AGGF1 (ENSBBBG00000021443) #24	PDE8B (ENSBBBG00000021396) #26	WDR41 (ENSBBBG00000021018) #29	TBCA (ENSBBBG00000005639) #31	ENSBBBG00000005636	AP3B1 (ENSBBBG00000005629) #33	SCAMP1 (ENSBBBG00000020857) #34	LHFPL2 (ENSBBBG00000020821) #35	ARSB (ENSBBBG00000020814) #36
Siberian musk deer	MODERN SPECIES	69	SFXN1 (ENSMMSG00000014529)	DRD1 (ENSMMSG00000014544)	ENSMMSG00000014552	ENSMMSG00000014567	GCNT4 (ENSMMSG00000014582) #7	ANKRD31 (ENSMMSG00000014614) #9	HMGCR (ENSMMSG00000014812) #10	CERT1 (ENSMMSG00000014921) #11	POLK (ENSMMSG00000015182) #13	POC5 (ENSMMSG00000015294) #15	SV2C (ENSMMSG00000015327) #16	IQGAP2 (ENSMMSG00000015431) #17	F2RL2 (ENSMMSG00000015650) #19	F2R (ENSMMSG00000015666) #20	F2RL1 (ENSMMSG00000015677) #21	S100Z (ENSMMSG00000015687) #22	CRHBP (ENSMMSG00000015697) #23	ENSMMSG00000015737	AGGF1 (ENSMMSG00000015751) #24	ZBED3 (ENSMMSG00000015777)	PDE8B (ENSMMSG00000015917) #26	WDR41 (ENSMMSG00000017180) #29	OTP (ENSMMSG00000017274) #30	ENSMMSG00000017301	ENSMMSG00000017442	AP3B1 (ENSMMSG00000017470) #33	SCAMP1 (ENSMMSG00000017674) #34	LHFPL2 (ENSMMSG00000017736) #35	ARSB (ENSMMSG00000017759) #36	DMGDH (ENSMMSG00000017858) #37	BHMT2 (ENSMMSG00000017965)
Yarkand deer	MODERN SPECIES	3	HRH2 (ENSCHYG00000005212)	SFXN1 (ENSCHYG00000005262)	DRD1 (ENSCHYG00000005319)	GCNT4 (ENSCHYG00000005367) #7	ANKRD31 (ENSCHYG00000005425) #9	HMGCR (ENSCHYG00000005715) #10	CERT1 (ENSCHYG00000005851) #11	POLK (ENSCHYG00000006041) #13	POC5 (ENSCHYG00000006247) #15	SV2C (ENSCHYG00000006307) #16	IQGAP2 (ENSCHYG00000006385) #17	F2RL2 (ENSCHYG00000006675) #19	F2R (ENSCHYG00000006697) #20	ENSCHYG00000006719	F2RL1 (ENSCHYG00000006741) #21	S100Z (ENSCHYG00000006771) #22	CRHBP (ENSCHYG00000006799) #23	AGGF1 (ENSCHYG00000006866) #24	ZBED3 (ENSCHYG00000006906)	ENSCHYG00000006937	ENSCHYG00000006952	ENSCHYG00000006962 #26	ENSCHYG00000007028 #26	WDR41 (ENSCHYG00000007090) #29	OTP (ENSCHYG00000007305) #30	TBCA (ENSCHYG00000007320) #31	ENSCHYG00000007338	ENSCHYG00000007344	ENSCHYG00000007356	AP3B1 (ENSCHYG00000007402) #33	SCAMP1 (ENSCHYG00000007687) #34
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #16	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Beluga whale	MODERN SPECIES	71	NSA2 (ENSDLEG00000008766)	FAM169A (ENSDLEG00000008731)	GCNT4 (ENSDLEG00000008712) #7	ANKRD31 (ENSDLEG00000008542) #9	HMGCR (ENSDLEG00000008447) #10	COL4A3BP (ENSDLEG00000008328) #11	POLK (ENSDLEG00000008261) #13	POC5 (ENSDLEG00000008196) #15	ENSDLEG00000008154	SV2C (ENSDLEG00000008107) #16	ENSDLEG00000008092	F2RL2 (ENSDLEG00000008080) #19	IQGAP2 (ENSDLEG00000008039) #17	F2R (ENSDLEG00000008028) #20	F2RL1 (ENSDLEG00000008016) #21	S100Z (ENSDLEG00000008008) #22	CRHBP (ENSDLEG00000007986) #23	AGGF1 (ENSDLEG00000007958) #24	ZBED3 (ENSDLEG00000007936)	PDE8B (ENSDLEG00000015062) #26	WDR41 (ENSDLEG00000014960) #29	OTP (ENSDLEG00000014945) #30	TBCA (ENSDLEG00000014906) #31	AP3B1 (ENSDLEG00000014741) #33	SCAMP1 (ENSDLEG00000014708) #34	LHFPL2 (ENSDLEG00000014699) #35	ARSB (ENSDLEG00000014686) #36	DMGDH (ENSDLEG00000014641) #37	BHMT2 (ENSDLEG00000014617)	BHMT (ENSDLEG00000014599)	JMY (ENSDLEG00000014574)
Narwhal	MODERN SPECIES	298	ENSMMNG00015006875	FAM169A (ENSMMNG00015006911)	GCNT4 (ENSMMNG00015006954) #7	ANKRD31 (ENSMMNG00015007010) #9	HMGCR (ENSMMNG00015007107) #10	CERT1 (ENSMMNG00015007218) #11	POLK (ENSMMNG00015007374) #13	ANKDD1B (ENSMMNG00015007467) #14	POC5 (ENSMMNG00015007540) #15	SV2C (ENSMMNG00015007600) #16	ENSMMNG00015007640	IQGAP2 (ENSMMNG00015007731) #17	F2RL2 (ENSMMNG00015007923) #19	F2R (ENSMMNG00015007933) #20	F2RL1 (ENSMMNG00015007943) #21	S100Z (ENSMMNG00015007958) #22	CRHBP (ENSMMNG00015007977) #23	AGGF1 (ENSMMNG00015008009) #24	ZBED3 (ENSMMNG00015008041)	PDE8B (ENSMMNG00015008112) #26	WDR41 (ENSMMNG00015008176) #29	OTP (ENSMMNG00015008215) #30	TBCA (ENSMMNG00015008230) #31	AP3B1 (ENSMMNG00015008260) #33	SCAMP1 (ENSMMNG00015008303) #34	LHFPL2 (ENSMMNG00015008328) #35	ARSB (ENSMMNG00015008346) #36	DMGDH (ENSMMNG00015008374) #37	BHMT2 (ENSMMNG00015008393)	BHMT (ENSMMNG00015008415)	JMY (ENSMMNG00015008440)
Vaquita	MODERN SPECIES	14	GFM2 (ENSPSNG00000006458)	ENSPSNG00000006396	FAM169A (ENSPSNG00000006255)	GCNT4 (ENSPSNG00000006178) #7	ANKRD31 (ENSPSNG00000006120) #9	HMGCR (ENSPSNG00000006005) #10	CERT1 (ENSPSNG00000005809) #11	POLK (ENSPSNG00000005609) #13	POC5 (ENSPSNG00000005438) #15	ENSPSNG00000005362	SV2C (ENSPSNG00000005309) #16	F2RL2 (ENSPSNG00000005286) #19	IQGAP2 (ENSPSNG00000005144) #17	F2R (ENSPSNG00000005065) #20	F2RL1 (ENSPSNG00000005843) #21	S100Z (ENSPSNG00000005821) #22	CRHBP (ENSPSNG00000005773) #23	AGGF1 (ENSPSNG00000005724) #24	ZBED3 (ENSPSNG00000005710)	PDE8B (ENSPSNG00000005114) #26	WDR41 (ENSPSNG00000004776) #29	OTP (ENSPSNG00000004725) #30	TBCA (ENSPSNG00000004666) #31	AP3B1 (ENSPSNG00000004553) #33	SCAMP1 (ENSPSNG00000004447) #34	LHFPL2 (ENSPSNG00000004403) #35	ARSB (ENSPSNG00000004356) #36	DMGDH (ENSPSNG00000004287) #37	BHMT2 (ENSPSNG00000004227)	BHMT (ENSPSNG00000004175)	JMY (ENSPSNG00000004120)
Dolphin	MODERN SPECIES	5128																S100Z (ENSTTRG00000004749) #22
Sperm whale	MODERN SPECIES	19	NSA2 (ENSPCTG00005001800)	FAM169A (ENSPCTG00005001823)	ENSPCTG00005001839	GCNT4 (ENSPCTG00005001860) #7	ANKRD31 (ENSPCTG00005001908) #9	HMGCR (ENSPCTG00005002015) #10	COL4A3BP (ENSPCTG00005002102) #11	POLK (ENSPCTG00005002299) #13	POC5 (ENSPCTG00005002372) #15	SV2C (ENSPCTG00005002439) #16	IQGAP2 (ENSPCTG00005002535) #17	F2RL2 (ENSPCTG00005002767) #19	ENSPCTG00005002778	F2R (ENSPCTG00005002792) #20	F2RL1 (ENSPCTG00005002799) #21	S100Z (ENSPCTG00005002807) #22	AGGF1 (ENSPCTG00005002832) #24	ZBED3 (ENSPCTG00005002866)	PDE8B (ENSPCTG00005002983) #26	WDR41 (ENSPCTG00005003516) #29	OTP (ENSPCTG00005003577) #30	TBCA (ENSPCTG00005003597) #31	AP3B1 (ENSPCTG00005003664) #33	SCAMP1 (ENSPCTG00005003758) #34	LHFPL2 (ENSPCTG00005003792) #35	ARSB (ENSPCTG00005003811) #36	DMGDH (ENSPCTG00005003853) #37	BHMT (ENSPCTG00005003876)	JMY (ENSPCTG00005003899)	HOMER1 (ENSPCTG00005003925)	TENT2 (ENSPCTG00005003973)
Blue whale	MODERN SPECIES	14	ENSBMSG00010004702	ENSBMSG00010004714	ENSBMSG00010004732	GCNT4 (ENSBMSG00010004754) #7	ANKRD31 (ENSBMSG00010004774) #9	HMGCR (ENSBMSG00010004832) #10	CERT1 (ENSBMSG00010004912) #11	POLK (ENSBMSG00010005438) #13	POC5 (ENSBMSG00010005501) #15	SV2C (ENSBMSG00010005531) #16	ENSBMSG00010005549	IQGAP2 (ENSBMSG00010005591) #17	F2RL2 (ENSBMSG00010005686) #19	F2R (ENSBMSG00010005694) #20	F2RL1 (ENSBMSG00010005699) #21	S100Z (ENSBMSG00010005711) #22	CRHBP (ENSBMSG00010005714) #23	AGGF1 (ENSBMSG00010005734) #24	ZBED3 (ENSBMSG00010005760)	PDE8B (ENSBMSG00010005858) #26	WDR41 (ENSBMSG00010006297) #29	OTP (ENSBMSG00010006319) #30	ENSBMSG00010006335 #31	ENSBMSG00010006352	AP3B1 (ENSBMSG00010006360) #33	SCAMP1 (ENSBMSG00010006378) #34	LHFPL2 (ENSBMSG00010006395) #35	ARSB (ENSBMSG00010006407) #36	DMGDH (ENSBMSG00010006427) #37	BHMT2 (ENSBMSG00010006453)	BHMT (ENSBMSG00010006489)
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000154742.b	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Carnivora	ANCESTRAL SPECIES	8	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000154742.b	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Felidae	ANCESTRAL SPECIES	6	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000154742.b	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00390000003115.j	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Panthera	ANCESTRAL SPECIES	6	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000154742.b	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00390000003115.j	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Tiger	MODERN SPECIES	134	ENSPTIG00000021404	ENSPTIG00000005537	FAM169A (ENSPTIG00000020456)	GCNT4 (ENSPTIG00000005529) #7	ENSPTIG00000019989 #9	HMGCR (ENSPTIG00000018612) #10	CERT1 (ENSPTIG00000016589) #11	POLK (ENSPTIG00000014864) #13	ANKDD1B (ENSPTIG00000013441) #14	POC5 (ENSPTIG00000011856) #15	SV2C (ENSPTIG00000010098) #16	F2RL2 (ENSPTIG00000009666) #19	IQGAP2 (ENSPTIG00000021975) #17	F2R (ENSPTIG00000021894) #20	F2RL1 (ENSPTIG00000021859) #21	S100Z (ENSPTIG00000021832) #22	CRHBP (ENSPTIG00000021691) #23	AGGF1 (ENSPTIG00000021519) #24	PDE8B (ENSPTIG00000014747) #26	WDR41 (ENSPTIG00000011923) #29	OTP (ENSPTIG00000011169) #30	TBCA (ENSPTIG00000009506) #31	AP3B1 (ENSPTIG00000008485) #33	SCAMP1 (ENSPTIG00000007335) #34	LHFPL2 (ENSPTIG00000006957) #35	ARSB (ENSPTIG00000003156) #36	DMGDH (ENSPTIG00000021430) #37	BHMT2 (ENSPTIG00000020984)	BHMT (ENSPTIG00000020191)	JMY (ENSPTIG00000019858)	HOMER1 (ENSPTIG00000018119)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000154742.b	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00390000003115.j	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00390000009443.j	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a
leopard	MODERN SPECIES	40	ENSPPRG00000004205	FAM169A (ENSPPRG00000005349)	GCNT4 (ENSPPRG00000017075) #7	ENSPPRG00000006600 #9	HMGCR (ENSPPRG00000008332) #10	CERT1 (ENSPPRG00000009941) #11	POLK (ENSPPRG00000012504) #13	ANKDD1B (ENSPPRG00000013528) #14	POC5 (ENSPPRG00000017915) #15	ENSPPRG00000021813	SV2C (ENSPPRG00000024498) #16	F2RL2 (ENSPPRG00000024088) #19	IQGAP2 (ENSPPRG00000001278) #17	F2R (ENSPPRG00000001748) #20	F2RL1 (ENSPPRG00000001778) #21	S100Z (ENSPPRG00000002129) #22	CRHBP (ENSPPRG00000002387) #23	AGGF1 (ENSPPRG00000004438) #24	ZBED3 (ENSPPRG00000017742)	PDE8B (ENSPPRG00000012726) #26	WDR41 (ENSPPRG00000015058) #29	OTP (ENSPPRG00000015334) #30	TBCA (ENSPPRG00000018237) #31	AP3B1 (ENSPPRG00000019993) #33	ENSPPRG00000020501	SCAMP1 (ENSPPRG00000000330) #34	LHFPL2 (ENSPPRG00000000681) #35	ENSPPRG00000000967	ARSB (ENSPPRG00000002867) #36	DMGDH (ENSPPRG00000002973) #37	BHMT2 (ENSPPRG00000003496)
lion	MODERN SPECIES		ENSPLOG00000002461	GCNT4 (ENSPLOG00000002455) #7	ENSPLOG00000002438 #9	ENSPLOG00000002411	HMGCR (ENSPLOG00000002361) #10	CERT1 (ENSPLOG00000002211) #11	POLK (ENSPLOG00000002076) #13	ANKDD1B (ENSPLOG00000002011) #14	POC5 (ENSPLOG00000001946) #15	ENSPLOG00000001913	SV2C (ENSPLOG00000001869) #16	F2RL2 (ENSPLOG00000001850) #19	IQGAP2 (ENSPLOG00000001777) #17	F2R (ENSPLOG00000001727) #20	F2RL1 (ENSPLOG00000001714) #21	S100Z (ENSPLOG00000001701) #22	CRHBP (ENSPLOG00000001686) #23	AGGF1 (ENSPLOG00000001638) #24	ZBED3 (ENSPLOG00000001610)	PDE8B (ENSPLOG00000001335) #26	WDR41 (ENSPLOG00000001110) #29	OTP (ENSPLOG00000001071) #30	TBCA (ENSPLOG00000001046) #31	AP3B1 (ENSPLOG00000000902) #33	SCAMP1 (ENSPLOG00000000849) #34	LHFPL2 (ENSPLOG00000000832) #35	ENSPLOG00000000818	ARSB (ENSPLOG00000000803) #36	DMGDH (ENSPLOG00000000773) #37	BHMT2 (ENSPLOG00000000718)	BHMT (ENSPLOG00000000665)
Cat	MODERN SPECIES		GFM2 (ENSFCAG00000011977)	ENSFCAG00000011978	FAM169A (ENSFCAG00000031781)	GCNT4 (ENSFCAG00000010125) #7	ENSFCAG00000029332 #9	HMGCR (ENSFCAG00000000007) #10	CERT1 (ENSFCAG00000031307) #11	POLK (ENSFCAG00000001614) #13	ANKDD1B (ENSFCAG00000009659) #14	POC5 (ENSFCAG00000009661) #15	ENSFCAG00000048312	SV2C (ENSFCAG00000003321) #16	IQGAP2 (ENSFCAG00000003323) #17	F2RL2 (ENSFCAG00000040850) #19	F2R (ENSFCAG00000003325) #20	S100Z (ENSFCAG00000044986) #22	CRHBP (ENSFCAG00000023090) #23	AGGF1 (ENSFCAG00000018724) #24	ZBED3 (ENSFCAG00000044339)	PDE8B (ENSFCAG00000005432) #26	WDR41 (ENSFCAG00000026146) #29	OTP (ENSFCAG00000032267) #30	TBCA (ENSFCAG00000026107) #31	AP3B1 (ENSFCAG00000030762) #33	SCAMP1 (ENSFCAG00000007805) #34	ARSB (ENSFCAG00000033754) #36	ENSFCAG00000035649	DMGDH (ENSFCAG00000011882) #37	BHMT (ENSFCAG00000040239)	JMY (ENSFCAG00000025959)	HOMER1 (ENSFCAG00000015755)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT00950000183076.b #17	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00940000161125 #22
Greater horseshoe bat	MODERN SPECIES	25	ENSRFEG00010012400	FAM169A (ENSRFEG00010012573)	GCNT4 (ENSRFEG00010012676) #7	ANKRD31 (ENSRFEG00010012703) #9	HMGCR (ENSRFEG00010013017) #10	CERT1 (ENSRFEG00010013140) #11	POLK (ENSRFEG00010013650) #13	ANKDD1B (ENSRFEG00010013842) #14	POC5 (ENSRFEG00010014089) #15	SV2C (ENSRFEG00010014249) #16	IQGAP2 (ENSRFEG00010014371) #17	F2RL2 (ENSRFEG00010015786) #19	F2R (ENSRFEG00010015825) #20	F2RL1 (ENSRFEG00010015917) #21	CRHBP (ENSRFEG00010015859) #23	S100Z (ENSRFEG00010015950) #22	AGGF1 (ENSRFEG00010016035) #24	ZBED3 (ENSRFEG00010016086)	PDE8B (ENSRFEG00010016179) #26	WDR41 (ENSRFEG00010017690) #29	OTP (ENSRFEG00010017860) #30	TBCA (ENSRFEG00010017900) #31	AP3B1 (ENSRFEG00010018051) #33	ENSRFEG00010018153	ENSRFEG00010018181	SCAMP1 (ENSRFEG00010018228) #34	LHFPL2 (ENSRFEG00010018294) #35	ARSB (ENSRFEG00010018336) #36	DMGDH (ENSRFEG00010018532) #37	BHMT2 (ENSRFEG00010018710)	BHMT (ENSRFEG00010018771)
Megabat	MODERN SPECIES	259											SV2C (ENSPVAG00000009721) #16	IQGAP2 (ENSPVAG00000009723) #17	F2RL2 (ENSPVAG00000009726) #19	F2R (ENSPVAG00000009728) #20	F2RL1 (ENSPVAG00000009729) #21	S100Z (ENSPVAG00000009731) #22	CRHBP (ENSPVAG00000009732) #23	AGGF1 (ENSPVAG00000009733) #24
Equus	ANCESTRAL SPECIES	6	ENSGT00550000074890	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00940000159721 #7	ENSGT00940000162618 #9	ENSGT00940000155305 #10	ENSGT00940000155123.b #11	ENSGT00940000156667 #13	ENSGT00940000154170.A #14	ENSGT00390000004454 #15	ENSGT00950000182940.b.b #16	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #17	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103	ENSGT00940000157817 #26	ENSGT00390000017026 #29	ENSGT00940000159952 #30	ENSGT00390000009710 #31	ENSGT00940000157603 #33	ENSGT00940000157310 #34	ENSGT00990000203589.b.b #35	ENSGT00940000158270 #36	ENSGT00940000158176 #37	ENSGT00390000003122.c.b	ENSGT00390000003122.c.a	ENSGT00510000046704.b.a
Donkey	MODERN SPECIES	29	GFM2 (ENSEASG00005018285)	ENSEASG00005018414	FAM169A (ENSEASG00005018417)	GCNT4 (ENSEASG00005037231) #7	ANKRD31 (ENSEASG00005018424) #9	HMGCR (ENSEASG00005018428) #10	CERT1 (ENSEASG00005018435) #11	POLK (ENSEASG00005018442) #13	ANKDD1B (ENSEASG00005035528) #14	POC5 (ENSEASG00005018452) #15	SV2C (ENSEASG00005018455) #16	F2RL2 (ENSEASG00005036850) #19	IQGAP2 (ENSEASG00005000244) #17	F2R (ENSEASG00005037330) #20	F2RL1 (ENSEASG00005001812) #21	S100Z (ENSEASG00005001816) #22	CRHBP (ENSEASG00005001822) #23	AGGF1 (ENSEASG00005001829) #24	ZBED3 (ENSEASG00005034455)	PDE8B (ENSEASG00005001845) #26	WDR41 (ENSEASG00005001862) #29	OTP (ENSEASG00005001863) #30	ENSEASG00005032921	ENSEASG00005028729 #31	AP3B1 (ENSEASG00005001889) #33	SCAMP1 (ENSEASG00005001900) #34	LHFPL2 (ENSEASG00005001904) #35	ARSB (ENSEASG00005001910) #36	DMGDH (ENSEASG00005001920) #37	BHMT2 (ENSEASG00005001941)	BHMT (ENSEASG00005001952)
Horse	MODERN SPECIES	5	HEXB (ENSECAG00000011657)	GFM2 (ENSECAG00000006640)	NSA2 (ENSECAG00000005528)	FAM169A (ENSECAG00000024132)	GCNT4 (ENSECAG00000005515) #7	ANKRD31 (ENSECAG00000024123) #9	HMGCR (ENSECAG00000021330) #10	CERT1 (ENSECAG00000017349) #11	POLK (ENSECAG00000014876) #13	ANKDD1B (ENSECAG00000014521) #14	POC5 (ENSECAG00000013824) #15	SV2C (ENSECAG00000010569) #16	F2RL2 (ENSECAG00000010531) #19	IQGAP2 (ENSECAG00000004274) #17	F2RL1 (ENSECAG00000002867) #21	S100Z (ENSECAG00000000977) #22	F2R (ENSECAG00000004055) #20	CRHBP (ENSECAG00000017949) #23	ZBED3 (ENSECAG00000040464)	PDE8B (ENSECAG00000012189) #26	WDR41 (ENSECAG00000009496) #29	OTP (ENSECAG00000009423) #30	TBCA (ENSECAG00000009383) #31	AP3B1 (ENSECAG00000022849) #33	SCAMP1 (ENSECAG00000021921) #34	LHFPL2 (ENSECAG00000021890) #35	ARSB (ENSECAG00000020847) #36	BHMT2 (ENSECAG00000018440)	DMGDH (ENSECAG00000019851) #37	BHMT (ENSECAG00000015626)	ENSECAG00000052194