Amniota	ANCESTRAL SPECIES	4	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35
Mammalia	ANCESTRAL SPECIES	24	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Theria	ANCESTRAL SPECIES	30	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.a.b ##9	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Primates	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT00950000183043.a.b.b.a.b.kb.a #10	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT00950000183043.a.b.b.a.b.kb.a #10	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234620.a.a.a.a.a.b.l.a.b #13	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Pig-tailed macaque	MODERN SPECIES	272	RASEF (ENSMNEG00000044341) #7	ENSMNEG00000039588 #8	ENSMNEG00000040526 #9	ENSMNEG00000037264 #10	TLE1 (ENSMNEG00000045296) #11	ENSMNEG00000043496 #12	ENSMNEG00000031137 #13	TLE4 (ENSMNEG00000041600) #14	ENSMNEG00000035579 #15	CEP78 (ENSMNEG00000035338) #16	ENSMNEG00000030187 #17	ENSMNEG00000044136 #18	GNAQ (ENSMNEG00000029362) #19	ENSMNEG00000014454 #20	ENSMNEG00000014845 #21	GNA14 (ENSMNEG00000040924) #22	VPS13A (ENSMNEG00000033084) #23	FOXB2 (ENSMNEG00000023676) #24	PRUNE2 (ENSMNEG00000036658) #25	GCNT1 (ENSMNEG00000007369) #26	ENSMNEG00000036738 #27	PCSK5 (ENSMNEG00000025347) #28	OSTF1 (ENSMNEG00000040401) #29	NMRK1 (ENSMNEG00000017921) #30	CARNMT1 (ENSMNEG00000042764) #31	ENSMNEG00000040689 #32	C9orf40 (ENSMNEG00000042694) #33	TRPM6 (ENSMNEG00000042106) #34	RORB (ENSMNEG00000042439) #35	ANXA1 (ENSMNEG00000028666) #36	CYP1D1 (ENSMNEG00000037174) #37
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT00950000183043.a.b.b.a.b.kb.a #10	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234620.a.a.a.a.a.b.l.a.b #13	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Rhesus	MODERN SPECIES	6	RASEF (ENSMMUG00000005988) #7	ENSMMUG00000064274	ENSMMUG00000050566	ENSMMUG00000060364	ENSMMUG00000059900	ENSMMUG00000015181 #9	ENSMMUG00000043575 #10	TLE1 (ENSMMUG00000003718) #11	ENSMMUG00000006148 #13	TLE4 (ENSMMUG00000023365) #14	ENSMMUG00000061519	ENSMMUG00000056840	PSAT1 (ENSMMUG00000011868) #15	CEP78 (ENSMMUG00000013003) #16	GNAQ (ENSMMUG00000055875) #19	GNA14 (ENSMMUG00000019761) #22	VPS13A (ENSMMUG00000019754) #23	FOXB2 (ENSMMUG00000021769) #24	PRUNE2 (ENSMMUG00000001043) #25	GCNT1 (ENSMMUG00000060380) #26	RFK (ENSMMUG00000057759) #27	PCSK5 (ENSMMUG00000022023) #28	OSTF1 (ENSMMUG00000010401) #29	NMRK1 (ENSMMUG00000010400) #30	CARNMT1 (ENSMMUG00000010399) #31	TRPM6 (ENSMMUG00000013102) #34	RORB (ENSMMUG00000012571) #35	ENSMMUG00000061106	ANXA1 (ENSMMUG00000012667) #36	CYP1D1 (ENSMMUG00000020548) #37	ALDH1A1 (ENSMMUG00000013303)
Crab-eating macaque	MODERN SPECIES	6	GKAP1 (ENSMFAG00000002304)	UBQLN1 (ENSMFAG00000038703)	IDNK (ENSMFAG00000025314)	FRMD3 (ENSMFAG00000042216)	RASEF (ENSMFAG00000046414) #7	ENSMFAG00000035600 #9	TLE1 (ENSMFAG00000042116) #11	ENSMFAG00000052030	ENSMFAG00000052460	TLE4 (ENSMFAG00000031817) #14	ENSMFAG00000032662 #15	CEP78 (ENSMFAG00000023050) #16	ENSMFAG00000065595	ENSMFAG00000056118	GNAQ (ENSMFAG00000003921) #19	GNA14 (ENSMFAG00000043028) #22	VPS13A (ENSMFAG00000001206) #23	ENSMFAG00000064329	ENSMFAG00000001184	FOXB2 (ENSMFAG00000017898) #24	PRUNE2 (ENSMFAG00000046406) #25	GCNT1 (ENSMFAG00000023079) #26	RFK (ENSMFAG00000044343) #27	ENSMFAG00000064744	PCSK5 (ENSMFAG00000039542) #28	ENSMFAG00000064432	OSTF1 (ENSMFAG00000065664) #29	NMRK1 (ENSMFAG00000002149) #30	CARNMT1 (ENSMFAG00000055475) #31	TRPM6 (ENSMFAG00000042901) #34	RORB (ENSMFAG00000046226) #35
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT00950000183043.a.b.b.a.b.kb.a #10	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347.d #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Olive baboon	MODERN SPECIES	4	UBQLN1 (ENSPANG00000024877)	ENSPANG00000024897	ENSPANG00000046148	FRMD3 (ENSPANG00000024898)	RASEF (ENSPANG00000024899) #7	ENSPANG00000024906 #9	TLE1 (ENSPANG00000024905) #11	ENSPANG00000024904 ##13	ENSPANG00000039137	ENSPANG00000041233	TLE4 (ENSPANG00000024903) #14	ENSPANG00000041116	ENSPANG00000024902 #15	CEP78 (ENSPANG00000024901) #16	GNAQ (ENSPANG00000024900) #19	GNA14 (ENSPANG00000024922) #22	VPS13A (ENSPANG00000024938) #23	ENSPANG00000051369	ENSPANG00000045275	ENSPANG00000049454	PRUNE2 (ENSPANG00000024936) #25	GCNT1 (ENSPANG00000011524) #26	RFK (ENSPANG00000033522) #27	PCSK5 (ENSPANG00000024934) #28	OSTF1 (ENSPANG00000024933) #29	NMRK1 (ENSPANG00000024931) #30	CARNMT1 (ENSPANG00000024930) #31	ENSPANG00000044337	C9orf40 (ENSPANG00000030522) #33	ENSPANG00000043661	TRPM6 (ENSPANG00000024928) #34
Cercopithecinae_d	ANCESTRAL SPECIES	34	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.b.kb.b #9	ENSGT00950000183043.a.b.b.a.b.kb.a #10	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347.d #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Drill	MODERN SPECIES	884													ENSMLEG00000001685 #15	CEP78 (ENSMLEG00000018621) #16	GNAQ (ENSMLEG00000029020) #19	GNA14 (ENSMLEG00000031725) #22	ENSMLEG00000043370 #21	VPS13A (ENSMLEG00000029984) #23	PRUNE2 (ENSMLEG00000036315) #25	GCNT1 (ENSMLEG00000020969) #26	ENSMLEG00000034323 #27	PCSK5 (ENSMLEG00000039394) #28
Sooty mangabey	MODERN SPECIES	629	UBQLN1 (ENSCATG00000041838)	IDNK (ENSCATG00000041475)	FRMD3 (ENSCATG00000033534)	ENSCATG00000021632	ENSCATG00000040297 #8	ENSCATG00000038993 #9	ENSCATG00000021583 #10	TLE1 (ENSCATG00000033789) #11	TLE4 (ENSCATG00000022648) #14	ENSCATG00000044621 #15	CEP78 (ENSCATG00000036923) #16	ENSCATG00000021563 #17	ENSCATG00000044511 #18	ENSCATG00000003045 #19	ENSCATG00000043408 #21	GNA14 (ENSCATG00000003306) #22	VPS13A (ENSCATG00000036715) #23	ENSCATG00000044702	FOXB2 (ENSCATG00000022251) #24	PRUNE2 (ENSCATG00000041249) #25	ENSCATG00000035860 #27	PCSK5 (ENSCATG00000032835) #28	OSTF1 (ENSCATG00000043742) #29	NMRK1 (ENSCATG00000032637) #30	CARNMT1 (ENSCATG00000029180) #31	ENSCATG00000044017 #32	C9orf40 (ENSCATG00000042316) #33	TRPM6 (ENSCATG00000040469) #34	RORB (ENSCATG00000043441) #35	ANXA1 (ENSCATG00000032811) #36	CYP1D1 (ENSCATG00000017926) #37
Vervet Monkey	MODERN SPECIES	3	RMI1 (ENSCSAG00000018503)	ENSCSAG00000007560	C9orf64 (ENSCSAG00000007582)	KIF27 (ENSCSAG00000007594)	GKAP1 (ENSCSAG00000007603)	UBQLN1 (ENSCSAG00000007613)	IDNK (ENSCSAG00000007619)	FRMD3 (ENSCSAG00000007627)	RASEF (ENSCSAG00000007663) #7	ENSCSAG00000007683 #9	TLE1 (ENSCSAG00000007687) #11	TLE4 (ENSCSAG00000007699) #14	ENSCSAG00000007705 #15	CEP78 (ENSCSAG00000007718) #16	GNAQ (ENSCSAG00000007724) #19	GNA14 (ENSCSAG00000007735) #22	VPS13A (ENSCSAG00000007781) #23	GCNT1 (ENSCSAG00000018501) #26	RFK (ENSCSAG00000007800) #27	PCSK5 (ENSCSAG00000007915) #28	OSTF1 (ENSCSAG00000007971) #29	NMRK1 (ENSCSAG00000007978) #30	CARNMT1 (ENSCSAG00000007984) #31	C9orf40 (ENSCSAG00000007989) #33	TRPM6 (ENSCSAG00000008115) #34	RORB (ENSCSAG00000008161) #35	ANXA1 (ENSCSAG00000008173) #36	CYP1D1 (ENSCSAG00000008181) #37	ALDH1A1 (ENSCSAG00000008188)	TMC1 (ENSCSAG00000008231)	ZFAND5 (ENSCSAG00000008265)
Rhinopithecus	ANCESTRAL SPECIES	197											ENSGT00390000010391.w.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.a.a #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Golden snub-nosed monkey	MODERN SPECIES	1158													ENSRROG00000039847 #15	CEP78 (ENSRROG00000040568) #16	GNAQ (ENSRROG00000041250) #19	GNA14 (ENSRROG00000037116) #22	ENSRROG00000027453	ENSRROG00000034738	ENSRROG00000037262 #23
Black snub-nosed monkey	MODERN SPECIES	1096								ENSRBIG00000012060	TLE4 (ENSRBIG00000030332) #14	ENSRBIG00000035546 #15	CEP78 (ENSRBIG00000044796) #16	ENSRBIG00000032897 #18	GNAQ (ENSRBIG00000042001) #19	ENSRBIG00000002072 #20	ENSRBIG00000024188	GNA14 (ENSRBIG00000028274) #22	VPS13A (ENSRBIG00000007952) #23	ENSRBIG00000023197	FOXB2 (ENSRBIG00000030572) #24	PRUNE2 (ENSRBIG00000040675) #25	RFK (ENSRBIG00000036195) #27	PCSK5 (ENSRBIG00000039511) #28	OSTF1 (ENSRBIG00000031483) #29	NMRK1 (ENSRBIG00000033112) #30	CARNMT1 (ENSRBIG00000044281) #31	C9orf40 (ENSRBIG00000020651) #33	TRPM6 (ENSRBIG00000012146) #34
Hominoidea	ANCESTRAL SPECIES	23	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.b ##15	ENSGT00390000013287 #16	ENSGT00950000182935.B.a.q.a.a #18	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.b ##15	ENSGT00390000013287 #16	ENSGT00950000182935.B.a.q.a.a #18	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b.fb #9	ENSGT00950000183043.a.b.b.a.b.gb #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.b ##15	ENSGT00390000013287 #16	ENSGT00950000182935.B.a.q.a.a #18	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Gorilla	MODERN SPECIES	22	GKAP1 (ENSGGOG00000005564)	UBQLN1 (ENSGGOG00000016254)	IDNK (ENSGGOG00000023865)	FRMD3 (ENSGGOG00000004546)	RASEF (ENSGGOG00000006651) #7	ENSGGOG00000043095 #8	ENSGGOG00000022476 ##9	SPATA31D1 (ENSGGOG00000016183) #9	ENSGGOG00000036417 #9	TLE1 (ENSGGOG00000000751) #11	TLE4 (ENSGGOG00000000292) #14	PSAT1 (ENSGGOG00000015480) ##15	CEP78 (ENSGGOG00000001126) #16	ENSGGOG00000007023 #18	ENSGGOG00000037158	GNA14 (ENSGGOG00000013561) #22	VPS13A (ENSGGOG00000022591) #23	FOXB2 (ENSGGOG00000043358) #24	PRUNE2 (ENSGGOG00000003389) #25	RFK (ENSGGOG00000037112) #27	PCSK5 (ENSGGOG00000015095) #28	OSTF1 (ENSGGOG00000011920) #29	NMRK1 (ENSGGOG00000011911) #30	CARNMT1 (ENSGGOG00000012752) #31	TRPM6 (ENSGGOG00000011987) #34	RORB (ENSGGOG00000011970) #35	ANXA1 (ENSGGOG00000004678) #36	ALDH1A1 (ENSGGOG00000008563)	TMC1 (ENSGGOG00000011002)	ZFAND5 (ENSGGOG00000008957)	GDA (ENSGGOG00000008537)
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00390000002374	ENSGT00940000157487.mb.b	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b.fb #9	ENSGT00950000183043.a.b.b.a.b.gb #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.b ##15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Human	MODERN SPECIES	21	C9orf64 (ENSG00000165118)	KIF27 (ENSG00000165115)	GKAP1 (ENSG00000165113)	UBQLN1 (ENSG00000135018)	IDNK (ENSG00000148057)	FRMD3 (ENSG00000172159)	RASEF (ENSG00000165105) #7	SPATA31D1 (ENSG00000214929) #9	SPATA31D3 (ENSG00000186788) #9	SPATA31D4 (ENSG00000189357) #9	TLE1 (ENSG00000196781) #11	TLE4 (ENSG00000106829) #14	PSAT1 (ENSG00000135069) ##15	CEP78 (ENSG00000148019) #16	GNAQ (ENSG00000156052) #19	GNA14 (ENSG00000156049) #22	VPS13A (ENSG00000197969) #23	FOXB2 (ENSG00000204612) #24	PRUNE2 (ENSG00000106772) #25	GCNT1 (ENSG00000187210) #26	RFK (ENSG00000135002) #27	PCSK5 (ENSG00000099139) #28	OSTF1 (ENSG00000134996) #29	NMRK1 (ENSG00000106733) #30	CARNMT1 (ENSG00000156017) #31	C9orf40 (ENSG00000135045) #33	TRPM6 (ENSG00000119121) #34	RORB (ENSG00000198963) #35	ANXA1 (ENSG00000135046) #36	ALDH1A1 (ENSG00000165092)	TMC1 (ENSG00000165091)
Pan	ANCESTRAL SPECIES	36	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00550000074980.b #8	ENSGT00950000183043.a.b.b.a.a.a.a.a.a.c.b.b ##9	ENSGT00950000183043.a.b.b.a.b.fb #9	ENSGT00950000183043.a.b.b.a.b.gb #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.b ##15	ENSGT00390000013287 #16	ENSGT00950000182971.C.hb.b	ENSGT00950000182935.B.a.q.a.a #18	ENSGT00940000161347 #19	ENSGT00510000047030.xb.a.c.b #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.`b #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Chimpanzee	MODERN SPECIES	22	UBQLN1 (ENSPTRG00000021055)	FRMD3 (ENSPTRG00000021053)	RASEF (ENSPTRG00000021052) #7	ENSPTRG00000047503	ENSPTRG00000047351 #8	ENSPTRG00000050795 ##9	ENSPTRG00000043940 #9	TLE1 (ENSPTRG00000021048) #11	TLE4 (ENSPTRG00000021047) #14	PSAT1 (ENSPTRG00000021045) ##15	CEP78 (ENSPTRG00000021044) #16	ENSPTRG00000049362	ENSPTRG00000048739 #18	GNAQ (ENSPTRG00000021043) #19	ENSPTRG00000050740 #21	GNA14 (ENSPTRG00000021042) #22	VPS13A (ENSPTRG00000021041) #23	FOXB2 (ENSPTRG00000029242) #24	PRUNE2 (ENSPTRG00000021038) #25	GCNT1 (ENSPTRG00000043705) #26	ENSPTRG00000047373	RFK (ENSPTRG00000021036) #27	PCSK5 (ENSPTRG00000021033) #28	OSTF1 (ENSPTRG00000021031) #29	NMRK1 (ENSPTRG00000021030) #30	CARNMT1 (ENSPTRG00000021028) #31	C9H9orf40 (ENSPTRG00000021027) #33	TRPM6 (ENSPTRG00000021026) #34	RORB (ENSPTRG00000021025) #35	ANXA1 (ENSPTRG00000021024) #36	ALDH1A1 (ENSPTRG00000021023)
Bonobo	MODERN SPECIES	22	IDNK (ENSPPAG00000027107)	FRMD3 (ENSPPAG00000025462)	RASEF (ENSPPAG00000042152) #7	ENSPPAG00000032506 #8	ENSPPAG00000033574 ##9	SPATA31D1 (ENSPPAG00000036570) #9	ENSPPAG00000029676 #9	TLE1 (ENSPPAG00000036940) #11	TLE4 (ENSPPAG00000040003) #14	PSAT1 (ENSPPAG00000036829) ##15	CEP78 (ENSPPAG00000040548) #16	ENSPPAG00000034884	ENSPPAG00000042095 #18	GNAQ (ENSPPAG00000028510) #19	ENSPPAG00000042939 #21	ENSPPAG00000040048 #22	VPS13A (ENSPPAG00000005660) #23	ENSPPAG00000041248 #24	PRUNE2 (ENSPPAG00000030555) #25	GCNT1 (ENSPPAG00000018525) #26	RFK (ENSPPAG00000044017) #27	PCSK5 (ENSPPAG00000027360) #28	OSTF1 (ENSPPAG00000039936) #29	NMRK1 (ENSPPAG00000033100) #30	CARNMT1 (ENSPPAG00000038872) #31	ENSPPAG00000035253 #33	TRPM6 (ENSPPAG00000030433) #34	RORB (ENSPPAG00000027216) #35	ANXA1 (ENSPPAG00000030576) #36	ALDH1A1 (ENSPPAG00000027865)	ENSPPAG00000042355
Orangutan	MODERN SPECIES	22	C9orf64 (ENSPPYG00000019326)	KIF27 (ENSPPYG00000019325)	GKAP1 (ENSPPYG00000019324)	UBQLN1 (ENSPPYG00000019323)	IDNK (ENSPPYG00000033310)	FRMD3 (ENSPPYG00000019321)	RASEF (ENSPPYG00000019320) #7	ENSPPYG00000031794 #9	ENSPPYG00000037427 #9	TLE1 (ENSPPYG00000019316) #11	TLE4 (ENSPPYG00000019315) #14	ENSPPYG00000019314	PSAT1 (ENSPPYG00000019313) ##15	CEP78 (ENSPPYG00000019312) #16	GNAQ (ENSPPYG00000019311) #19	GNA14 (ENSPPYG00000019310) #22	VPS13A (ENSPPYG00000019309) #23	PRUNE2 (ENSPPYG00000019305) #25	GCNT1 (ENSPPYG00000019304) #26	ENSPPYG00000019303	RFK (ENSPPYG00000019302) #27	PCSK5 (ENSPPYG00000019301) #28	OSTF1 (ENSPPYG00000035050) #29	ENSPPYG00000032582	NMRK1 (ENSPPYG00000019299) #30	CARNMT1 (ENSPPYG00000019298) #31	C9orf40 (ENSPPYG00000036469) #33	TRPM6 (ENSPPYG00000019295) #34	RORB (ENSPPYG00000019294) #35	ANXA1 (ENSPPYG00000019293) #36	ALDH1A1 (ENSPPYG00000019292)
Gibbon	MODERN SPECIES	10	C9orf64 (ENSNLEG00000003473)	KIF27 (ENSNLEG00000003410)	GKAP1 (ENSNLEG00000003375)	UBQLN1 (ENSNLEG00000003306)	IDNK (ENSNLEG00000034109)	FRMD3 (ENSNLEG00000003288)	RASEF (ENSNLEG00000003245) #7	ENSNLEG00000003238 #9	ENSNLEG00000033199 #9	TLE1 (ENSNLEG00000003182) #11	ENSNLEG00000029249	TLE4 (ENSNLEG00000003084) #14	PSAT1 (ENSNLEG00000002989) ##15	CEP78 (ENSNLEG00000002920) #16	GNAQ (ENSNLEG00000002860) #19	GNA14 (ENSNLEG00000002821) #22	ENSNLEG00000033637 #21	VPS13A (ENSNLEG00000002199) #23	ENSNLEG00000030344 #25	PRUNE2 (ENSNLEG00000002079) #25	GCNT1 (ENSNLEG00000034138) #26	RFK (ENSNLEG00000035200) #27	PCSK5 (ENSNLEG00000001931) #28	OSTF1 (ENSNLEG00000001854) #29	NMRK1 (ENSNLEG00000001798) #30	CARNMT1 (ENSNLEG00000034652) #31	ENSNLEG00000001769 #33	ENSNLEG00000028548	TRPM6 (ENSNLEG00000001498) #34	RORB (ENSNLEG00000001398) #35	ANXA1 (ENSNLEG00000001203) #36
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158947.v	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.c #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348.d #26	ENSGT00550000075030.n	ENSGT00390000015537.cb #27	ENSGT00940000155770 #28	ENSGT00940000161942.a.a.a.b.b.a.a	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164.i #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Mas night monkey	MODERN SPECIES	703																GNA14 (ENSANAG00000019616) #22	VPS13A (ENSANAG00000034677) #23
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158947.v	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.c #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348.d #26	ENSGT00550000075030.n	ENSGT00390000015537.cb #27	ENSGT00940000155770 #28	ENSGT00940000161942.a.a.a.b.b.a.a	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164.i #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Cebidae_a	ANCESTRAL SPECIES	85	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158947.v	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.k.c #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348.d #26	ENSGT00550000075030.n	ENSGT00390000015537.cb #27	ENSGT00940000155770 #28	ENSGT00940000161942.a.a.a.b.b.a.a	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164.i #34	ENSGT00940000157708 #35
Capuchin	MODERN SPECIES	150										TLE4 (ENSCCAG00000033488) #14	ENSCCAG00000029236 #15	CEP78 (ENSCCAG00000031635) #16	ENSCCAG00000014391	GNAQ (ENSCCAG00000028987) #19	ENSCCAG00000027642	GNA14 (ENSCCAG00000022875) #22	VPS13A (ENSCCAG00000032548) #23	FOXB2 (ENSCCAG00000019520) #24	PRUNE2 (ENSCCAG00000031291) #25	ENSCCAG00000017058 #26	ENSCCAG00000034465	ENSCCAG00000026186 #27	PCSK5 (ENSCCAG00000030269) #28	ENSCCAG00000033511	OSTF1 (ENSCCAG00000026237) #29	NMRK1 (ENSCCAG00000012965) #30	CARNMT1 (ENSCCAG00000034529) #31	ENSCCAG00000015037	C9orf40 (ENSCCAG00000033663) #33	TRPM6 (ENSCCAG00000036659) #34	RORB (ENSCCAG00000027613) #35
Bolivian squirrel monkey	MODERN SPECIES	43	ENSSBOG00000029007	AIF1L (ENSSBOG00000026358)	LAMC3 (ENSSBOG00000029307)	FIBCD1 (ENSSBOG00000031329)	ABL1 (ENSSBOG00000029514)	EXOSC2 (ENSSBOG00000022712)	ENSSBOG00000029129	FUBP3 (ENSSBOG00000021755)	ENSSBOG00000021830	HMCN2 (ENSSBOG00000033989)	ENSSBOG00000026941	ENSSBOG00000020286	PSAT1 (ENSSBOG00000035275) #15	CEP78 (ENSSBOG00000025965) #16	GNAQ (ENSSBOG00000021413) #19	GNA14 (ENSSBOG00000027170) #22	VPS13A (ENSSBOG00000020923) #23	FOXB2 (ENSSBOG00000024647) #24	PRUNE2 (ENSSBOG00000023559) #25	GCNT1 (ENSSBOG00000018905) #26	ENSSBOG00000032040	ENSSBOG00000019534 #27	PCSK5 (ENSSBOG00000009773) #28	ENSSBOG00000009396	OSTF1 (ENSSBOG00000027446) #29	NMRK1 (ENSSBOG00000032396) #30	CARNMT1 (ENSSBOG00000029802) #31	TRPM6 (ENSSBOG00000030648) #34	RORB (ENSSBOG00000024252) #35	ENC1 (ENSSBOG00000018607)	ENSSBOG00000011145
Marmoset	MODERN SPECIES		KCNV2 (ENSCJAG00000042809)	VLDLR (ENSCJAG00000010772)	ENSCJAG00000042690	SMARCA2 (ENSCJAG00000010710)	DMRT2 (ENSCJAG00000010690)	DMRT3 (ENSCJAG00000063670)	ENSCJAG00000084547	KANK1 (ENSCJAG00000010595)	DOCK8 (ENSCJAG00000010485)	ENSCJAG00000078334	ENSCJAG00000054365 ##9	ENSCJAG00000010423	ENSCJAG00000040149	ENSCJAG00000073324 ##9	ENSCJAG00000085396	ENSCJAG00000074827 #22	ENSCJAG00000003147 #23	ENSCJAG00000032275	ENSCJAG00000054232 ##9	ENSCJAG00000084872	ENSCJAG00000072998	ENSCJAG00000003266	GNAQ (ENSCJAG00000003268) #19	ENSCJAG00000042365	CEP78 (ENSCJAG00000003289) #16	PSAT1 (ENSCJAG00000003319) #15	ENSCJAG00000052461	ENSCJAG00000084238	TLE4 (ENSCJAG00000003336) #14	ENSCJAG00000083224	ENSCJAG00000072614
Tarsier	MODERN SPECIES	3973												PSAT1 (ENSTSYG00000000093) #15	CEP78 (ENSTSYG00000014143) #16	GNAQ (ENSTSYG00000009194) #19	ENSTSYG00000028216	GNA14 (ENSTSYG00000000455) #22	ENSTSYG00000029340
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a.d #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT00950000183037.A.b #37
Lemuriformes	ANCESTRAL SPECIES	66	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a.d #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36
Lemuriformes_a	ANCESTRAL SPECIES	250													ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26
Coquerels sifaka	MODERN SPECIES	475											ENSPCOG00000023650	ENSPCOG00000014693	PSAT1 (ENSPCOG00000016182) #15	CEP78 (ENSPCOG00000009887) #16	GNAQ (ENSPCOG00000024722) #19	GNA14 (ENSPCOG00000024302) #22	VPS13A (ENSPCOG00000023693) #23	FOXB2 (ENSPCOG00000025595) #24	PRUNE2 (ENSPCOG00000026186) #25	RFK (ENSPCOG00000025134) #27	ENSPCOG00000016767	PCSK5 (ENSPCOG00000016483) #28
Greater bamboo lemur	MODERN SPECIES	411															GNAQ (ENSPSMG00000017767) #19	GNA14 (ENSPSMG00000017748) #22	VPS13A (ENSPSMG00000017501) #23	FOXB2 (ENSPSMG00000017149) #24	PRUNE2 (ENSPSMG00000017116) #25	GCNT1 (ENSPSMG00000017048) #26
Mouse lemur	MODERN SPECIES	1	SLC28A3 (ENSMICG00000009916)	RMI1 (ENSMICG00000031486)	HNRNPK (ENSMICG00000015780)	C9orf64 (ENSMICG00000015776)	KIF27 (ENSMICG00000026425)	GKAP1 (ENSMICG00000004713)	UBQLN1 (ENSMICG00000004708)	IDNK (ENSMICG00000004704)	FRMD3 (ENSMICG00000000303)	RASEF (ENSMICG00000011836) #7	TLE1 (ENSMICG00000012918) #11	TLE4 (ENSMICG00000010164) #14	PSAT1 (ENSMICG00000003010) #15	ENSMICG00000003003 #16	GNAQ (ENSMICG00000044048) #19	GNA14 (ENSMICG00000003970) #22	VPS13A (ENSMICG00000003937) #23	FOXB2 (ENSMICG00000032613) #24	PRUNE2 (ENSMICG00000042329) #25	ENSMICG00000035231 #26	ENSMICG00000047245	ENSMICG00000014909	FBP2 (ENSMICG00000001148)	PTPRD (ENSMICG00000006128)	ENSMICG00000031481	ENSMICG00000035188	DMAC1 (ENSMICG00000035725)	KDM4C (ENSMICG00000010464)	GLDC (ENSMICG00000000602)	UHRF2 (ENSMICG00000036338)	TPD52L3 (ENSMICG00000000600)
Bushbaby	MODERN SPECIES	121	ENSOGAG00000030912	ENSOGAG00000027042	ENSOGAG00000026418 ##9	TLE1 (ENSOGAG00000012917) #11	ENSOGAG00000024643	ENSOGAG00000027188	TLE4 (ENSOGAG00000009689) #14	ENSOGAG00000009484	ENSOGAG00000032944	PSAT1 (ENSOGAG00000003045) #15	CEP78 (ENSOGAG00000003043) #16	ENSOGAG00000025336	GNAQ (ENSOGAG00000009233) #19	ENSOGAG00000025570	ENSOGAG00000034066	GNA14 (ENSOGAG00000009228) #22	VPS13A (ENSOGAG00000009206) #23	FOXB2 (ENSOGAG00000031210) #24	ENSOGAG00000028224	PRUNE2 (ENSOGAG00000029865) #25	GCNT1 (ENSOGAG00000002901) #26	RFK (ENSOGAG00000013120) #27	PCSK5 (ENSOGAG00000013106) #28	OSTF1 (ENSOGAG00000002603) #29	NMRK1 (ENSOGAG00000002602) #30	CARNMT1 (ENSOGAG00000002600) #31	C9orf40 (ENSOGAG00000029257) #33	TRPM6 (ENSOGAG00000008591) #34	RORB (ENSOGAG00000001523) #35	ENSOGAG00000009311 #36	ENSOGAG00000028240
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Tree shrew	MODERN SPECIES	5706															ENSTBEG00000009447	GNA14 (ENSTBEG00000009389) #22	VPS13A (ENSTBEG00000006487) #23
Glires	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Lagomorpha	ANCESTRAL SPECIES	77													ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Rabbit	MODERN SPECIES		ENSOCUG00000027755 #9	ENSOCUG00000034184	ENSOCUG00000023951	ENSOCUG00000032438	ENSOCUG00000027027	ENSOCUG00000035151 #11	ENSOCUG00000000531 #11	ENSOCUG00000022657	ENSOCUG00000032761	TLE4 (ENSOCUG00000011891) #14	ENSOCUG00000024344	ENSOCUG00000026996	PSAT1 (ENSOCUG00000007765) #15	CEP78 (ENSOCUG00000007758) #16	GNAQ (ENSOCUG00000016559) #19	GNA14 (ENSOCUG00000005507) #22	VPS13A (ENSOCUG00000001328) #23	FOXB2 (ENSOCUG00000002111) #24	PRUNE2 (ENSOCUG00000008553) #25	GCNT1 (ENSOCUG00000007916) #26	ENSOCUG00000001622 #27	PCSK5 (ENSOCUG00000001616) #28	ENSOCUG00000028054	ENSOCUG00000017040 #29	ENSOCUG00000017026 #30	CARNMT1 (ENSOCUG00000017017) #31	C9orf40 (ENSOCUG00000006076) #33	TRPM6 (ENSOCUG00000003734) #34	RORB (ENSOCUG00000003732) #35	ENSOCUG00000026323	ENSOCUG00000024168
Pika	MODERN SPECIES	4435															GNAQ (ENSOPRG00000009904) #19	GNA14 (ENSOPRG00000009880) #22	VPS13A (ENSOPRG00000009741) #23
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Hystricomorpha	ANCESTRAL SPECIES	46		ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT01030000234669.A	ENSGT01090000260018.D.d.a	ENSGT01090000260018.A.a.b	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	53	ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT00940000154294.k.b	ENSGT00940000154294.l	ENSGT01030000234669.A	ENSGT01090000260018.A.a.b	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Guinea pig	MODERN SPECIES	21				RACK1 (ENSCPOG00000008724)	TRIM41 (ENSCPOG00000022446)	TRIM7 (ENSCPOG00000034919)	ZFP62 (ENSCPOG00000037011)	MGAT1 (ENSCPOG00000032870)	RASEF (ENSCPOG00000005004) #7	TLE1 (ENSCPOG00000013582) #11	TLE4 (ENSCPOG00000010034) #14	PSAT1 (ENSCPOG00000030281) #15	CEP78 (ENSCPOG00000009445) #16	GNAQ (ENSCPOG00000034812) #19	ENSCPOG00000019876	GNA14 (ENSCPOG00000005387) #22	VPS13A (ENSCPOG00000006841) #23	PRUNE2 (ENSCPOG00000040525) #25	GCNT1 (ENSCPOG00000013671) #26	RFK (ENSCPOG00000038626) #27	PCSK5 (ENSCPOG00000002680) #28	OSTF1 (ENSCPOG00000007226) #29	NMRK1 (ENSCPOG00000039820) #30	CARNMT1 (ENSCPOG00000034337) #31	TRPM6 (ENSCPOG00000011221) #34	RORB (ENSCPOG00000010612) #35	ANXA1 (ENSCPOG00000014597) #36	ENSCPOG00000037891	ENSCPOG00000027235	ENSCPOG00000039887	TMC1 (ENSCPOG00000002837)
Hystricomorpha_b	ANCESTRAL SPECIES	114											ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Long-tailed chinchilla	MODERN SPECIES	219											PSAT1 (ENSCLAG00000004235) #15	CEP78 (ENSCLAG00000002278) #16	ENSCLAG00000001201	ENSCLAG00000001211	ENSCLAG00000001286	GNA14 (ENSCLAG00000001333) #22	VPS13A (ENSCLAG00000001458) #23	FOXB2 (ENSCLAG00000002151) #24	ENSCLAG00000002177 #25	ENSCLAG00000002261 #25	GCNT1 (ENSCLAG00000002318) #26	RFK (ENSCLAG00000001176) #27	PCSK5 (ENSCLAG00000001262) #28	OSTF1 (ENSCLAG00000001314) #29	NMRK1 (ENSCLAG00000001323) #30	ENSCLAG00000001350 #31	TRPM6 (ENSCLAG00000001382) #34	RORB (ENSCLAG00000001463) #35	ENSCLAG00000001590 #36	ENSCLAG00000001755	ENSCLAG00000001772
Degu	MODERN SPECIES	136		TLE1 (ENSODEG00000003417) #11	ENSODEG00000018969	ENSODEG00000018925	ENSODEG00000003548	ENSODEG00000003198	TLE4 (ENSODEG00000003247) #14	ENSODEG00000018932	ENSODEG00000003341	ENSODEG00000018927	ENSODEG00000003369 #15	ENSODEG00000003423 ##32	CEP78 (ENSODEG00000003443) #16	GNAQ (ENSODEG00000003488) #19	ENSODEG00000003499	GNA14 (ENSODEG00000003528) #22	ENSODEG00000003546	VPS13A (ENSODEG00000003608) #23	FOXB2 (ENSODEG00000018997) #24	ENSODEG00000019009	ENSODEG00000018936	ENSODEG00000003738 #25	ENSODEG00000003761 #25	GCNT1 (ENSODEG00000018998) #26	RFK (ENSODEG00000003081) #27	ENSODEG00000003128 #28	ENSODEG00000003169	OSTF1 (ENSODEG00000003195) #29	NMRK1 (ENSODEG00000003218) #30	CARNMT1 (ENSODEG00000003242) #31	TRPM6 (ENSODEG00000003284) #34
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000048766	ENSHGLG00000047277 ##9	ENSHGLG00000048302	ENSHGLG00000000915	ENSHGLG00000001072 #11	ENSHGLG00000019837	TLE4 (ENSHGLG00000002102) #14	ENSHGLG00000044467	ENSHGLG00000000755 #15	ENSHGLG00000002547 #16	ENSHGLG00000038481	ENSHGLG00000007997	ENSHGLG00000002513	ENSHGLG00000036185	ENSHGLG00000002009	ENSHGLG00000001656 #22	VPS13A (ENSHGLG00000000572) #23	FOXB2 (ENSHGLG00000001812) #24	ENSHGLG00000036846 #25	ENSHGLG00000040487 #25	GCNT1 (ENSHGLG00000000522) #26	ENSHGLG00000000486 #27	ENSHGLG00000000259 #28	ENSHGLG00000050620	ENSHGLG00000042174	ENSHGLG00000049071 #29	ENSHGLG00000044788 #30	ENSHGLG00000002210	CARNMT1 (ENSHGLG00000000378) #31	ENSHGLG00000033948	ENSHGLG00000050025
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374.u	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Marmotini	ANCESTRAL SPECIES	1										ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Marmotini_b	ANCESTRAL SPECIES	88										ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Squirrel	MODERN SPECIES	103															GNAQ (ENSSTOG00000024755) #19	GNA14 (ENSSTOG00000008680) #22	VPS13A (ENSSTOG00000008587) #23	ENSSTOG00000033146 #24	ENSSTOG00000026412	PRUNE2 (ENSSTOG00000023589) #25	GCNT1 (ENSSTOG00000012068) #26	ENSSTOG00000027323	RFK (ENSSTOG00000012064) #27	ENSSTOG00000020987	PCSK5 (ENSSTOG00000012040) #28	OSTF1 (ENSSTOG00000023378) #29	NMRK1 (ENSSTOG00000000389) #30	CARNMT1 (ENSSTOG00000000385) #31	TRPM6 (ENSSTOG00000013271) #34	RORB (ENSSTOG00000013264) #35	ANXA1 (ENSSTOG00000023530) #36
Arctic ground squirrel	MODERN SPECIES	131												TLE4 (ENSUPAG00010021868) #14	PSAT1 (ENSUPAG00010021862) #15	CEP78 (ENSUPAG00010021857) #16	ENSUPAG00010021855	GNA14 (ENSUPAG00010021852) #22	VPS13A (ENSUPAG00010021846) #23	FOXB2 (ENSUPAG00010021845) #24	ENSUPAG00010021844	PRUNE2 (ENSUPAG00010021836) #25	GCNT1 (ENSUPAG00010021834) #26	ENSUPAG00010021831	RFK (ENSUPAG00010021827) #27	ENSUPAG00010021821 #28
Alpin marmot	MODERN SPECIES	32									RASEF (ENSMMMG00000018363) #7	TLE1 (ENSMMMG00000012607) #11	ENSMMMG00000012571	TLE4 (ENSMMMG00000012524) #14	PSAT1 (ENSMMMG00000012517) #15	CEP78 (ENSMMMG00000012498) #16	GNAQ (ENSMMMG00000012272) #19	GNA14 (ENSMMMG00000012248) #22	VPS13A (ENSMMMG00000012153) #23	ENSMMMG00000012137 #24	ENSMMMG00000012128	PRUNE2 (ENSMMMG00000012039) #25	GCNT1 (ENSMMMG00000012027) #26	RFK (ENSMMMG00000012015) #27	ENSMMMG00000011961 #28	ENSMMMG00000011953	ENSMMMG00000011944	OSTF1 (ENSMMMG00000011932) #29	NMRK1 (ENSMMMG00000011918) #30	ENSMMMG00000011915	ENSMMMG00000011905 #33	TRPM6 (ENSMMMG00000011876) #34	RORB (ENSMMMG00000011844) #35
Eurasian red squirrel	MODERN SPECIES	6	ENSSVLG00005025192	GKAP1 (ENSSVLG00005025203)	ENSSVLG00005025241	UBQLN1 (ENSSVLG00005025254)	IDNK (ENSSVLG00005025283)	ENSSVLG00005025340	FRMD3 (ENSSVLG00005025365)	RASEF (ENSSVLG00005025415) #7	TLE1 (ENSSVLG00005025442) #11	ENSSVLG00005025469	TLE4 (ENSSVLG00005025580) #14	ENSSVLG00005025732	PSAT1 (ENSSVLG00005025737) #15	ENSSVLG00005025778 #16	ENSSVLG00005025826	GNA14 (ENSSVLG00005025833) #22	VPS13A (ENSSVLG00005025879) #23	ENSSVLG00005025921	FOXB2 (ENSSVLG00005014521) #24	PRUNE2 (ENSSVLG00005014607) #25	ENSSVLG00005014936	ENSSVLG00005015000	GCNT1 (ENSSVLG00005015046) #26	ENSSVLG00005015067 #27	PCSK5 (ENSSVLG00005015142) #28	ENSSVLG00005015236	ENSSVLG00005015253	OSTF1 (ENSSVLG00005015295) #29	NMRK1 (ENSSVLG00005015348) #30	CARNMT1 (ENSSVLG00005015445) #31	C9orf40 (ENSSVLG00005015497) #33
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158006	ENSGT00950000182916.a.b.a.b	ENSGT00940000155586.B	ENSGT00530000063790.b	ENSGT00940000155804	ENSGT00940000153617.D	ENSGT00390000003343	ENSGT00940000154930	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Muroidea	ANCESTRAL SPECIES	1	ENSGT00950000182916.a.b.a.b	ENSGT00940000155586.B	ENSGT00530000063790.b	ENSGT00940000155804	ENSGT00940000153617.D	ENSGT00390000003343	ENSGT00940000154930	ENSGT00940000158577	ENSGT00520000057958	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609
Muroidea_A	ANCESTRAL SPECIES		ENSGT01060000248581.A.a.a.a.e.b	ENSGT01100000263561.B	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01100000263561.B	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b.f #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT01060000248581.A.a.b	ENSGT01100000263561.B	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b.f #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b
Northern American deer mouse	MODERN SPECIES		Or10q1 (ENSPEMG00000026262)	Or10q12 (ENSPEMG00000026052)	Or1s2 (ENSPEMG00000029030)	Or9q2 (ENSPEMG00000028521)	ENSPEMG00000027169	Or9i14 (ENSPEMG00000028210)	Or9q1 (ENSPEMG00000030928)	ENSPEMG00000005907	ENSPEMG00000029012	Tle4 (ENSPEMG00000006537) #14	ENSPEMG00000025664	Psat1 (ENSPEMG00000022279) #15	Cep78 (ENSPEMG00000013176) #16	ENSPEMG00000029390	ENSPEMG00000026093 #19	Gna14 (ENSPEMG00000022983) #22	Vps13a (ENSPEMG00000022969) #23	ENSPEMG00000001408 #24	Prune2 (ENSPEMG00000009652) #25	ENSPEMG00000025542	Gcnt1 (ENSPEMG00000024295) #26	Rfk (ENSPEMG00000031112) #27	Pcsk5 (ENSPEMG00000002720) #28	ENSPEMG00000003630	Ostf1 (ENSPEMG00000020370) #29	Nmrk1 (ENSPEMG00000013725) #30	Carnmt1 (ENSPEMG00000010072) #31	D030056L22Rik (ENSPEMG00000025661) #33	Trpm6 (ENSPEMG00000011848) #34	Rorb (ENSPEMG00000000824) #35	Anxa1 (ENSPEMG00000014478) #36
Prairie vole	MODERN SPECIES	16	Gm4952 (ENSMOCG00000015076)	Glyat (ENSMOCG00000016115)	Keg1 (ENSMOCG00000012983)	Cntf (ENSMOCG00000016049)	Zfp91 (ENSMOCG00000018468)	Lpxn (ENSMOCG00000019266)	Or5b21 (ENSMOCG00000002067)	ENSMOCG00000009033	ENSMOCG00000017684	Or9q1 (ENSMOCG00000009793)	Tle4 (ENSMOCG00000011846) #14	ENSMOCG00000017959	ENSMOCG00000021736 #15	Cep78 (ENSMOCG00000020072) #16	ENSMOCG00000012700	Gna14 (ENSMOCG00000012393) #22	ENSMOCG00000013981	Vps13a (ENSMOCG00000019974) #23	ENSMOCG00000019450	Foxb2 (ENSMOCG00000001949) #24	ENSMOCG00000009883 #25	ENSMOCG00000019381 #25	Gcnt1 (ENSMOCG00000013528) #26	Rfk (ENSMOCG00000019217) #27	ENSMOCG00000020199 #28	Ostf1 (ENSMOCG00000021405) #29	Nmrk1 (ENSMOCG00000022247) #30	Carnmt1 (ENSMOCG00000005517) #31	D030056L22Rik (ENSMOCG00000012610) #33	Trpm6 (ENSMOCG00000012817) #34	Rorb (ENSMOCG00000020519) #35
Cricetinae	ANCESTRAL SPECIES	2	ENSGT01060000248581.A.a.a.a.e.b	ENSGT01060000248581.A.a.b	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b.f #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001011673	ENSCGRG00001010614	Or10q1 (ENSCGRG00001012195)	Or10q12 (ENSCGRG00001011414)	Or1s2 (ENSCGRG00001011281)	Or9q2 (ENSCGRG00001012139)	ENSCGRG00001021275	Or9i14 (ENSCGRG00001021924)	Or9q1 (ENSCGRG00001011797)	ENSCGRG00001012925	ENSCGRG00001012493	Tle4 (ENSCGRG00001023373) #14	Psat1 (ENSCGRG00001010797) #15	Cep78 (ENSCGRG00001023702) #16	Gnaq (ENSCGRG00001001493)	Gna14 (ENSCGRG00001002239) #22	Vps13a (ENSCGRG00001016073) #23	Foxb2 (ENSCGRG00001010014) #24	Prune2 (ENSCGRG00001006057) #25	Gcnt1 (ENSCGRG00001007418) #26	Rfk (ENSCGRG00001013646) #27	Pcsk5 (ENSCGRG00001018685) #28	ENSCGRG00001022403	Ostf1 (ENSCGRG00001011060) #29	ENSCGRG00001005253	ENSCGRG00001008426 #30	Carnmt1 (ENSCGRG00001013615) #31	D030056L22Rik (ENSCGRG00001015201) #33	Trpm6 (ENSCGRG00001018511) #34	Rorb (ENSCGRG00001012566) #35	Anxa1 (ENSCGRG00001020144) #36
Golden Hamster	MODERN SPECIES	617	Cntf (ENSMAUG00000011143)	Zfp91 (ENSMAUG00000011095)	Lpxn (ENSMAUG00000010591)	Or5b21 (ENSMAUG00000010581)	Or5b24 (ENSMAUG00000010357)	ENSMAUG00000010348	Or5b113 (ENSMAUG00000010634)	ENSMAUG00000011427	ENSMAUG00000010391	Or9q1 (ENSMAUG00000001875)	Tle4 (ENSMAUG00000010722) #14	ENSMAUG00000010124	ENSMAUG00000010617 #15	Cep78 (ENSMAUG00000010295) #16	Gnaq (ENSMAUG00000010263)	Gna14 (ENSMAUG00000010242) #22	ENSMAUG00000009666	Vps13a (ENSMAUG00000011043) #23	Foxb2 (ENSMAUG00000002346) #24	ENSMAUG00000010050 #25	ENSMAUG00000011637 #25	Gcnt1 (ENSMAUG00000002095) #26	ENSMAUG00000011219 #28	Ostf1 (ENSMAUG00000011202) #29	Nmrk1 (ENSMAUG00000009949) #30	Carnmt1 (ENSMAUG00000009492) #31	D030056L22Rik (ENSMAUG00000009324) #33	Trpm6 (ENSMAUG00000011731) #34	Rorb (ENSMAUG00000010447) #35	Anxa1 (ENSMAUG00000009898) #36	Aldh1a1 (ENSMAUG00000010223)
Murinae	ANCESTRAL SPECIES		ENSGT01060000248581.A.a.b	ENSGT01060000248581.A.a.a.a.e.b	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b	ENSGT00940000154609.ab
Mus	ANCESTRAL SPECIES		ENSGT01060000248581.A.a.b	ENSGT01060000248581.A.a.a.a.e.b	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b	ENSGT00940000154609.ab
Mus_A	ANCESTRAL SPECIES	16	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.a	ENSGT01100000263494.a.b.a.a.b.b	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.b	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b	ENSGT00940000154609.ab
Mus_B	ANCESTRAL SPECIES	16	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.a	ENSGT01100000263494.a.b.a.a.b.b	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.b	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b	ENSGT00940000154609.ab
Mouse	MODERN SPECIES	10	Or10w3 (ENSMUSG00000109520)	Or10q1 (ENSMUSG00000050865)	Or10q12 (ENSMUSG00000047207)	Or1s2 (ENSMUSG00000048356)	Or9q2 (ENSMUSG00000044040)	Or9i14 (ENSMUSG00000045395)	Or9q1 (ENSMUSG00000054526)	Or9i2 (ENSMUSG00000057270)	Or9i1 (ENSMUSG00000056858)	Or9i16 (ENSMUSG00000059105)	Or9i1b (ENSMUSG00000062314)	Tle4 (ENSMUSG00000024642) #14	Psat1 (ENSMUSG00000024640) #15	Cep78 (ENSMUSG00000041491) #16	Gnaq (ENSMUSG00000024639)	Gna14 (ENSMUSG00000024697) #22	Vps13a (ENSMUSG00000046230) #23	Foxb2 (ENSMUSG00000056829) #24	Prune2 (ENSMUSG00000039126) #25	Gcnt1 (ENSMUSG00000038843) #26	Rfk (ENSMUSG00000024712) #27	Pcsk5 (ENSMUSG00000024713) #28	Ostf1 (ENSMUSG00000024725) #29	Nmrk1 (ENSMUSG00000037847) #30	Carnmt1 (ENSMUSG00000024726) #31	D030056L22Rik (ENSMUSG00000047044) #33	Trpm6 (ENSMUSG00000024727) #34	Rorb (ENSMUSG00000036192) #35	Anxa1 (ENSMUSG00000024659) #36	Aldh1a1 (ENSMUSG00000053279)	Aldh1a7 (ENSMUSG00000024747)
Mus_C	ANCESTRAL SPECIES	24	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.a	ENSGT01100000263494.a.b.a.a.b.b	ENSGT01100000263494.a.b.a.a.a.a.o.a.b	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.`b	ENSGT00940000154609.ab
Steppe mouse	MODERN SPECIES	3183										Tle4 (ENSMSIG00000017471) #14	ENSMSIG00000017538	Psat1 (ENSMSIG00000017588) #15	Cep78 (ENSMSIG00000017625) #16	Gnaq (ENSMSIG00000017652)	ENSMSIG00000017672	Gna14 (ENSMSIG00000017683) #22	Vps13a (ENSMSIG00000017713) #23
spretus	MODERN SPECIES	10	Or10q1b (MGP_SPRETEiJ_G0023700)	MGP_SPRETEiJ_G0023701	Or10q12 (MGP_SPRETEiJ_G0023702)	Or1s2 (MGP_SPRETEiJ_G0023703)	Or9q2 (MGP_SPRETEiJ_G0023704)	Or9i14 (MGP_SPRETEiJ_G0023705)	Or9q1 (MGP_SPRETEiJ_G0023706)	MGP_SPRETEiJ_G0023707	MGP_SPRETEiJ_G0023708	MGP_SPRETEiJ_G0023709	MGP_SPRETEiJ_G0023710	Tle4 (MGP_SPRETEiJ_G0023711) #14	Psat1 (MGP_SPRETEiJ_G0023712) #15	Cep78 (MGP_SPRETEiJ_G0023713) #16	Gnaq (MGP_SPRETEiJ_G0023714)	Gna14 (MGP_SPRETEiJ_G0023715) #22	Vps13a (MGP_SPRETEiJ_G0023716) #23	Foxb2 (MGP_SPRETEiJ_G0023717) #24	Prune2 (MGP_SPRETEiJ_G0023718) #25	Gcnt1 (MGP_SPRETEiJ_G0023719) #26	Rfk (MGP_SPRETEiJ_G0023720) #27	MGP_SPRETEiJ_G0023721 #28	Ostf1 (MGP_SPRETEiJ_G0023722) #29	Nmrk1 (MGP_SPRETEiJ_G0023723) #30	MGP_SPRETEiJ_G0023724 #31	D030056L22Rik (MGP_SPRETEiJ_G0023725) #33	Trpm6 (MGP_SPRETEiJ_G0023726) #34	Rorb (MGP_SPRETEiJ_G0023727) #35	Anxa1 (MGP_SPRETEiJ_G0023728) #36	MGP_SPRETEiJ_G0023729	MGP_SPRETEiJ_G0023730
Ryukyu mouse	MODERN SPECIES	10	Or10q1b (MGP_CAROLIEiJ_G0022781)	Or10q1 (MGP_CAROLIEiJ_G0022782)	MGP_CAROLIEiJ_G0022783	Or1s2 (MGP_CAROLIEiJ_G0022784)	Or9q2 (MGP_CAROLIEiJ_G0022785)	Or9i14 (MGP_CAROLIEiJ_G0022786)	Or9q1 (MGP_CAROLIEiJ_G0022787)	Or9i2 (MGP_CAROLIEiJ_G0022788)	Or9i1 (MGP_CAROLIEiJ_G0022789)	Or9i16 (MGP_CAROLIEiJ_G0022790)	Or9i1b (MGP_CAROLIEiJ_G0022791)	Tle4 (MGP_CAROLIEiJ_G0022792) #14	Psat1 (MGP_CAROLIEiJ_G0022793) #15	Cep78 (MGP_CAROLIEiJ_G0022794) #16	Gnaq (MGP_CAROLIEiJ_G0022795)	Gna14 (MGP_CAROLIEiJ_G0022796) #22	Vps13a (MGP_CAROLIEiJ_G0022797) #23	Foxb2 (MGP_CAROLIEiJ_G0022798) #24	Prune2 (MGP_CAROLIEiJ_G0022799) #25	Gcnt1 (MGP_CAROLIEiJ_G0022800) #26	Rfk (MGP_CAROLIEiJ_G0022801) #27	MGP_CAROLIEiJ_G0022802 #28	Ostf1 (MGP_CAROLIEiJ_G0022803) #29	Nmrk1 (MGP_CAROLIEiJ_G0022804) #30	Carnmt1 (MGP_CAROLIEiJ_G0022805) #31	D030056L22Rik (MGP_CAROLIEiJ_G0022806) #33	Trpm6 (MGP_CAROLIEiJ_G0022807) #34	Rorb (MGP_CAROLIEiJ_G0022808) #35	Anxa1 (MGP_CAROLIEiJ_G0022809) #36	Aldh1a1 (MGP_CAROLIEiJ_G0022810)	Aldh1a7 (MGP_CAROLIEiJ_G0022811)
Shrew mouse	MODERN SPECIES		Or5b124 (MGP_PahariEiJ_G0014276)	Or10w1 (MGP_PahariEiJ_G0014277)	Or10q1b (MGP_PahariEiJ_G0014278)	Or10q1 (MGP_PahariEiJ_G0014279)	MGP_PahariEiJ_G0014280	Or1s2 (MGP_PahariEiJ_G0014281)	Or9q2 (MGP_PahariEiJ_G0014282)	MGP_PahariEiJ_G0014283	Or9q1 (MGP_PahariEiJ_G0014284)	Or9i2 (MGP_PahariEiJ_G0014285)	Or9i16 (MGP_PahariEiJ_G0014286)	Tle4 (MGP_PahariEiJ_G0014287) #14	Psat1 (MGP_PahariEiJ_G0014288) #15	Cep78 (MGP_PahariEiJ_G0014289) #16	Gnaq (MGP_PahariEiJ_G0014290)	Gna14 (MGP_PahariEiJ_G0014291) #22	Vps13a (MGP_PahariEiJ_G0014292) #23	Foxb2 (MGP_PahariEiJ_G0014293) #24	Prune2 (MGP_PahariEiJ_G0014294) #25	Gcnt1 (MGP_PahariEiJ_G0014295) #26	MGP_PahariEiJ_G0014296 #27	MGP_PahariEiJ_G0014297 #28	Ostf1 (MGP_PahariEiJ_G0014298) #29	Nmrk1 (MGP_PahariEiJ_G0014299) #30	D030056L22Rik (MGP_PahariEiJ_G0014300) #33	Trpm6 (MGP_PahariEiJ_G0014301) #34	Rorb (MGP_PahariEiJ_G0014302) #35	Anxa1 (MGP_PahariEiJ_G0014303) #36	Aldh1a1 (MGP_PahariEiJ_G0014304)	Aldh1a7 (MGP_PahariEiJ_G0014305)	Tmc1 (MGP_PahariEiJ_G0014306)
Rat	MODERN SPECIES		Or10w3 (ENSRNOG00000067633)	Or10q1 (ENSRNOG00000068256)	Or10q12 (ENSRNOG00000032600)	Or1s2 (ENSRNOG00000013192)	Or9q2 (ENSRNOG00000013198)	Or9i13 (ENSRNOG00000031224)	Or9q1 (ENSRNOG00000023530)	Or9i16 (ENSRNOG00000064819)	Or9i14 (ENSRNOG00000013208)	Or9i2 (ENSRNOG00000063548)	Or9i1b (ENSRNOG00000032117)	Tle4 (ENSRNOG00000013239) #14	Psat1 (ENSRNOG00000013971) #15	Cep78 (ENSRNOG00000014041) #16	Gnaq (ENSRNOG00000014183)	Gna14 (ENSRNOG00000014840) #22	Vps13a (ENSRNOG00000025539) #23	Foxb2 (ENSRNOG00000032137) #24	Prune2 (ENSRNOG00000015088) #25	Gcnt1 (ENSRNOG00000062686) #26	LOC120099997 (ENSRNOG00000022308)	Rfk (ENSRNOG00000022273) #27	Pcsk5 (ENSRNOG00000012036) #28	Ostf1 (ENSRNOG00000012156) #29	Nmrk1 (ENSRNOG00000012665) #30	Carnmt1 (ENSRNOG00000012872) #31	C1h9orf40 (ENSRNOG00000025644) #33	Trpm6 (ENSRNOG00000013053) #34	Rorb (ENSRNOG00000013413) #35	LOC108349792 (ENSRNOG00000029732)	ENSRNOG00000063861
Upper Galilee mountains blind mole rat	MODERN SPECIES	843															Gnaq (ENSNGAG00000021391)	Gna14 (ENSNGAG00000022142) #22	ENSNGAG00000000620	Vps13a (ENSNGAG00000018000) #23	Foxb2 (ENSNGAG00000008321) #24	ENSNGAG00000022504 #25	ENSNGAG00000023165	ENSNGAG00000005506 #25
Lesser Egyptian jerboa	MODERN SPECIES	50	ENSJJAG00000015577	ENSJJAG00000015492	Frmd3 (ENSJJAG00000019673)	Rasef (ENSJJAG00000023215) #7	ENSJJAG00000006657	ENSJJAG00000018428	ENSJJAG00000004662	Tle1 (ENSJJAG00000017288) #11	Tle4 (ENSJJAG00000014624) #14	ENSJJAG00000008651	ENSJJAG00000007961	Psat1 (ENSJJAG00000009742) #15	Cep78 (ENSJJAG00000010603) #16	Cyp2c70 (ENSJJAG00000004077)	ENSJJAG00000014142 #19	Gna14 (ENSJJAG00000021762) #22	ENSJJAG00000022956	Vps13a (ENSJJAG00000020332) #23	Foxb2 (ENSJJAG00000010748) #24	ENSJJAG00000000298 #25	ENSJJAG00000011068 #25	Gcnt1 (ENSJJAG00000007751) #26	ENSJJAG00000023775 #27	ENSJJAG00000017893 #28	ENSJJAG00000017021	ENSJJAG00000007517 #29	Nmrk1 (ENSJJAG00000016607) #30	ENSJJAG00000018227	Carnmt1 (ENSJJAG00000013720) #31	Trpm6 (ENSJJAG00000015158) #34	Rorb (ENSJJAG00000013056) #35
Kangaroo rat	MODERN SPECIES	359							Prxl2c (ENSDORG00000001634)	Cdc14b (ENSDORG00000005998)	Rasef (ENSDORG00000015570) #7	ENSDORG00000026939 #11	ENSDORG00000025974 #11	ENSDORG00000026113 #11	Tle4 (ENSDORG00000008552) #14	Psat1 (ENSDORG00000016698) #15	ENSDORG00000013680 #19	Gna14 (ENSDORG00000028684) #22	Vps13a (ENSDORG00000014372) #23	ENSDORG00000016172 #25	ENSDORG00000028786 #25	Gcnt1 (ENSDORG00000024110) #26	Rfk (ENSDORG00000028987) #27	ENSDORG00000004033 #28	ENSDORG00000002933 #29	Nmrk1 (ENSDORG00000002934) #30	Carnmt1 (ENSDORG00000002935) #31	Rorb (ENSDORG00000008602) #35	Anxa1 (ENSDORG00000011861) #36	ENSDORG00000007344	Tmc1 (ENSDORG00000011879)	Zfand5 (ENSDORG00000024820)	Gda (ENSDORG00000007276)
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Eulipotyphla	ANCESTRAL SPECIES	1430																ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23
Hedgehog	MODERN SPECIES	8271																GNA14 (ENSEEUG00000004720) #22	VPS13A (ENSEEUG00000004402) #23
Common shrew	MODERN SPECIES	3881																GNA14 (ENSSARG00000011280) #22
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.a ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Suina	ANCESTRAL SPECIES	23	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.a ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Chacoan peccary	MODERN SPECIES	19											TLE4 (ENSCWAG00000019130) #14	PSAT1 (ENSCWAG00000019225) #15	CEP78 (ENSCWAG00000019324) #16	GNAQ (ENSCWAG00000020026) #19	ENSCWAG00000020048	GNA14 (ENSCWAG00000020058) #22	VPS13A (ENSCWAG00000006755) #23	FOXB2 (ENSCWAG00000009905) #24	PRUNE2 (ENSCWAG00000009958) #25	GCNT1 (ENSCWAG00000010174) #26	RFK (ENSCWAG00000010183) #27	PCSK5 (ENSCWAG00000010242) #28	OSTF1 (ENSCWAG00000010320) #29	NMRK1 (ENSCWAG00000010385) #30	CARNMT1 (ENSCWAG00000010423) #31	C9orf40 (ENSCWAG00000010507) #33	TRPM6 (ENSCWAG00000010622) #34	RORB (ENSCWAG00000011984) #35	ANXA1 (ENSCWAG00000012214) #36	ALDH1A1 (ENSCWAG00000012260)	TMC1 (ENSCWAG00000012501)
Pig	MODERN SPECIES		C9orf131 (ENSSSCG00000005298)	DNAJB5 (ENSSSCG00000005297)	PHF24 (ENSSSCG00000005296)	ENSSSCG00000059160 ##9	ENSSSCG00000022044 ##9	ENSSSCG00000058846	ENSSSCG00000037497 ##9	ENSSSCG00000033805 #9	TLE1 (ENSSSCG00000005291) #11	ENSSSCG00000043640	TLE4 (ENSSSCG00000005288) #14	PSAT1 (ENSSSCG00000005287) #15	CEP78 (ENSSSCG00000005286) #16	GNAQ (ENSSSCG00000033763) #19	ENSSSCG00000050902	GNA14 (ENSSSCG00000005284) #22	VPS13A (ENSSSCG00000005282) #23	ENSSSCG00000005279 #24	ENSSSCG00000060679 #25	ENSSSCG00000039009 #25	GCNT1 (ENSSSCG00000005277) #26	RFK (ENSSSCG00000037277) #27	ENSSSCG00000057774	PCSK5 (ENSSSCG00000023520) #28	ENSSSCG00000045514	OSTF1 (ENSSSCG00000005273) #29	NMRK1 (ENSSSCG00000005272) #30	CARNMT1 (ENSSSCG00000005271) #31	C9orf40 (ENSSSCG00000031382) #33	TRPM6 (ENSSSCG00000005269) #34	RORB (ENSSSCG00000005268) #35
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.b.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970.fb #24	ENSGT00940000161970.gb #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609.o
Arabian camel	MODERN SPECIES	30	VCP (ENSCDRG00005008294)	ENSCDRG00005008506	ENSCDRG00005008542	DNAJB5 (ENSCDRG00005008554)	PHF24 (ENSCDRG00005008694)	ENSCDRG00005008755 ##9	ENSCDRG00005008891 #9	ENSCDRG00005008937	ENSCDRG00005009023 #9	ENSCDRG00005009152	TLE1 (ENSCDRG00005009223) #11	TLE4 (ENSCDRG00005009729) #14	PSAT1 (ENSCDRG00005010295) #15	CEP78 (ENSCDRG00005010412) #16	GNAQ (ENSCDRG00005010714) #19	GNA14 (ENSCDRG00005010802) #22	VPS13A (ENSCDRG00005010963) #23	ENSCDRG00005012146 #24	ENSCDRG00005012196 #24	PRUNE2 (ENSCDRG00005012296) #25	GCNT1 (ENSCDRG00005000054) #26	ENSCDRG00005000058	RFK (ENSCDRG00005000073) #27	PCSK5 (ENSCDRG00005000104) #28	OSTF1 (ENSCDRG00005000204) #29	NMRK1 (ENSCDRG00005000237) #30	CARNMT1 (ENSCDRG00005000294) #31	C9orf40 (ENSCDRG00005000313) #33	TRPM6 (ENSCDRG00005000352) #34	RORB (ENSCDRG00005000469) #35	ANXA1 (ENSCDRG00005000515) #36
Alpaca	MODERN SPECIES	2498															GNAQ (ENSVPAG00000002660) #19	ENSVPAG00000002658 #22	VPS13A (ENSVPAG00000002653) #23	ENSVPAG00000002649 #24	ENSVPAG00000002647 #25	ENSVPAG00000002644 #25	GCNT1 (ENSVPAG00000002643) #26
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Pecora	ANCESTRAL SPECIES	30	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000154929.A	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Bovidae	ANCESTRAL SPECIES	14	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##9	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Bovinae	ANCESTRAL SPECIES	14	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153786.f	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221.l #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Bos	ANCESTRAL SPECIES	10	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00940000156705.q.a	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153786.f	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000157708 #35	ENSGT00960000191550	ENSGT00940000155221.l #36
Bos_a	ANCESTRAL SPECIES	30	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.b ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00940000156705.q.a	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153786.f	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000157708 #35	ENSGT00960000191550	ENSGT00940000155221.l #36	ENSGT00950000183037.A.b #37
Wild yak	MODERN SPECIES	527													PSAT1 (ENSBMUG00000017264) #15	CEP78 (ENSBMUG00000017026) #16	GNAQ (ENSBMUG00000016719) #19	GNA14 (ENSBMUG00000016710) #22	VPS13A (ENSBMUG00000016513) #23	ENSBMUG00000016024 #24	ENSBMUG00000016005	ENSBMUG00000015977 #25	ENSBMUG00000015952 #25	GCNT1 (ENSBMUG00000015908) #26	RFK (ENSBMUG00000015895) #27	ENSBMUG00000015883	PCSK5 (ENSBMUG00000015866) #28	ENSBMUG00000015810
Domestic yak	MODERN SPECIES	26	ENSBGRG00000013622	ENSBGRG00000013635	DNAJB5 (ENSBGRG00000013654)	PHF24 (ENSBGRG00000013768)	ENSBGRG00000013818 ##9	ENSBGRG00000013886 ##9	ENSBGRG00000013935	ENSBGRG00000013989 #9	TLE1 (ENSBGRG00000014025) #11	ENSBGRG00000014478	TLE4 (ENSBGRG00000014515) #14	ENSBGRG00000015298	PSAT1 (ENSBGRG00000015370) #15	CEP78 (ENSBGRG00000015625) #16	GNAQ (ENSBGRG00000018521) #19	GNA14 (ENSBGRG00000018676) #22	ENSBGRG00000018726	VPS13A (ENSBGRG00000018767) #23	FOXB2 (ENSBGRG00000019072) #24	PRUNE2 (ENSBGRG00000019111) #25	GCNT1 (ENSBGRG00000019923) #26	RFK (ENSBGRG00000019943) #27	PCSK5 (ENSBGRG00000020040) #28	ENSBGRG00000020946	OSTF1 (ENSBGRG00000020958) #29	NMRK1 (ENSBGRG00000021061) #30	CARNMT1 (ENSBGRG00000021200) #31	ENSBGRG00000021340	ENSBGRG00000021355	ENSBGRG00000021369	TRPM6 (ENSBGRG00000021396) #34
Bos_b	ANCESTRAL SPECIES	3	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00940000156705.q.a	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153786.f	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000157708 #35	ENSGT00960000191550	ENSGT00940000155221.l #36
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005006605	ENSBIXG00005010808	DNAJB5 (ENSBIXG00005010876)	PHF24 (ENSBIXG00005010904)	ENSBIXG00005010937 ##9	ENSBIXG00005010942 ##9	ENSBIXG00005011007 #9	TLE1 (ENSBIXG00005011126) #11	ENSBIXG00005011164	TLE4 (ENSBIXG00005011277) #14	PSAT1 (ENSBIXG00005011341) #15	ENSBIXG00005011364	CEP78 (ENSBIXG00005006208) #16	GNAQ (ENSBIXG00005011522) #19	ENSBIXG00005011557	GNA14 (ENSBIXG00005011575) #22	VPS13A (ENSBIXG00005006324) #23	FOXB2 (ENSBIXG00005011723) #24	PRUNE2 (ENSBIXG00005007526) #25	GCNT1 (ENSBIXG00005012101) #26	ENSBIXG00005012140 #27	ENSBIXG00005012159	PCSK5 (ENSBIXG00005012986) #28	OSTF1 (ENSBIXG00005013151) #29	NMRK1 (ENSBIXG00005013188) #30	CARNMT1 (ENSBIXG00005013231) #31	TRPM6 (ENSBIXG00005014056) #34	ENSBIXG00005014163	RORB (ENSBIXG00005006505) #35	ENSBIXG00005014214	ENSBIXG00005014241 #36
Cow	MODERN SPECIES	27	VCP (ENSBTAG00000015000)	C8H9orf131 (ENSBTAG00000051343)	DNAJB5 (ENSBTAG00000018318)	PHF24 (ENSBTAG00000012809)	FAM205C (ENSBTAG00000017338) ##9	ENSBTAG00000049991 ##9	ENSBTAG00000050015	ENSBTAG00000005667 #9	TLE1 (ENSBTAG00000000256) #11	ENSBTAG00000006294	TLE4 (ENSBTAG00000003532) #14	ENSBTAG00000024233	PSAT1 (ENSBTAG00000013960) #15	CEP78 (ENSBTAG00000020752) #16	GNAQ (ENSBTAG00000009789) #19	GNA14 (ENSBTAG00000021127) #22	ENSBTAG00000017734 #23	ENSBTAG00000051821 #23	FOXB2 (ENSBTAG00000032983) #24	ENSBTAG00000048354 #25	PRUNE2 (ENSBTAG00000012991) #25	ENSBTAG00000053347 #25	GCNT1 (ENSBTAG00000012757) #26	RFK (ENSBTAG00000019345) #27	PCSK5 (ENSBTAG00000008101) #28	ENSBTAG00000053085	OSTF1 (ENSBTAG00000002746) #29	NMRK1 (ENSBTAG00000019687) #30	CARNMT1 (ENSBTAG00000008204) #31	C8H9orf40 (ENSBTAG00000013231) #33	ENSBTAG00000051504 #34
American bison	MODERN SPECIES	3212								ENSBBBG00000013680	TLE1 (ENSBBBG00000008115) #11	ENSBBBG00000002908	TLE4 (ENSBBBG00000013848) #14	ENSBBBG00000013872	PSAT1 (ENSBBBG00000013891) #15	CEP78 (ENSBBBG00000006946) #16	GNAQ (ENSBBBG00000001428) #19	GNA14 (ENSBBBG00000014272) #22	ENSBBBG00000003245 #23
Caprinae	ANCESTRAL SPECIES	14	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##9	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00730000111116.j	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Goat	MODERN SPECIES	27	VCP (ENSCHIG00000018325)	DNAJB5 (ENSCHIG00000003729)	PHF24 (ENSCHIG00000018664)	ENSCHIG00000005785 ##9	ENSCHIG00000018064 ##9	ENSCHIG00000026697 #9	ENSCHIG00000018732 ##9	ENSCHIG00000000627 #9	TLE1 (ENSCHIG00000019014) #11	ENSCHIG00000010112 ##17	TLE4 (ENSCHIG00000019651) #14	PSAT1 (ENSCHIG00000023475) #15	CEP78 (ENSCHIG00000016639) #16	ENSCHIG00000023442	GNAQ (ENSCHIG00000011392) #19	GNA14 (ENSCHIG00000021016) #22	VPS13A (ENSCHIG00000020594) #23	FOXB2 (ENSCHIG00000004613) #24	ENSCHIG00000009127 #25	ENSCHIG00000025880 #25	GCNT1 (ENSCHIG00000011189) #26	RFK (ENSCHIG00000023491) #27	PCSK5 (ENSCHIG00000004522) #28	OSTF1 (ENSCHIG00000012972) #29	NMRK1 (ENSCHIG00000014343) #30	CARNMT1 (ENSCHIG00000024458) #31	C9orf40 (ENSCHIG00000012544) #33	TRPM6 (ENSCHIG00000019917) #34	RORB (ENSCHIG00000025702) #35	ENSCHIG00000012586	ANXA1 (ENSCHIG00000020923) #36
Siberian musk deer	MODERN SPECIES	29	VCP (ENSMMSG00000013911)	C9orf131 (ENSMMSG00000013953)	DNAJB5 (ENSMMSG00000014036)	PHF24 (ENSMMSG00000014079)	ENSMMSG00000014101 ##9	ENSMMSG00000014127 ##9	ENSMMSG00000014140	ENSMMSG00000014150	TLE1 (ENSMMSG00000014201) #11	ENSMMSG00000014332	TLE4 (ENSMMSG00000014344) #14	PSAT1 (ENSMMSG00000014424) #15	CEP78 (ENSMMSG00000014473) #16	ENSMMSG00000014588	ENSMMSG00000014599	GNA14 (ENSMMSG00000014616) #22	VPS13A (ENSMMSG00000014654) #23	FOXB2 (ENSMMSG00000014816) #24	PRUNE2 (ENSMMSG00000014836) #25	ENSMMSG00000014983	GCNT1 (ENSMMSG00000014991) #26	RFK (ENSMMSG00000015003) #27
Yarkand deer	MODERN SPECIES	21	VCP (ENSCHYG00000026503)	ENSCHYG00000026490	ENSCHYG00000026476	ENSCHYG00000026469	DNAJB5 (ENSCHYG00000026463)	PHF24 (ENSCHYG00000026447)	ENSCHYG00000026436 ##9	ENSCHYG00000026428 ##9	ENSCHYG00000026421	TLE1 (ENSCHYG00000026374) #11	TLE4 (ENSCHYG00000026147) #14	PSAT1 (ENSCHYG00000026067) #15	CEP78 (ENSCHYG00000025990) #16	GNAQ (ENSCHYG00000025937) #19	ENSCHYG00000025920	GNA14 (ENSCHYG00000025896) #22	ENSCHYG00000025887	VPS13A (ENSCHYG00000025803) #23	FOXB2 (ENSCHYG00000025745) #24	PRUNE2 (ENSCHYG00000025376) #25	ENSCHYG00000025314	ENSCHYG00000025302	ENSCHYG00000025284 #27	PCSK5 (ENSCHYG00000024685) #28	ENSCHYG00000024600	ENSCHYG00000024591	OSTF1 (ENSCHYG00000024488) #29	ENSCHYG00000024377 #30	CARNMT1 (ENSCHYG00000024319) #31	C9orf40 (ENSCHYG00000024308) #33	TRPM6 (ENSCHYG00000024016) #34
Cetacea	ANCESTRAL SPECIES	9	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##9	ENSGT00950000183043.a.b.b.a.a.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000162764.A.a.b	ENSGT00940000153241.A #15	ENSGT00390000013287.t #16	ENSGT00940000161347 #19	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.v.a.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00910000148416	ENSGT00390000005323 #31	ENSGT00390000001325.a #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Blue whale	MODERN SPECIES	17	ENSBMSG00010004636	ENSBMSG00010004629	DNAJB5 (ENSBMSG00010004603)	PHF24 (ENSBMSG00010004582)	ENSBMSG00010004559 ##9	ENSBMSG00010004542 ##9	ENSBMSG00010004490	TLE1 (ENSBMSG00010004448) #11	ENSBMSG00010004414	TLE4 (ENSBMSG00010004237) #14	ENSBMSG00010004201	PSAT1 (ENSBMSG00010004175) #15	ENSBMSG00010004135 #16	GNAQ (ENSBMSG00010004092) #19	ENSBMSG00010004083	GNA14 (ENSBMSG00010004068) #22	ENSBMSG00010004060	VPS13A (ENSBMSG00010003835) #23	FOXB2 (ENSBMSG00010003713) #24	ENSBMSG00010003588 #25	GCNT1 (ENSBMSG00010003536) #26	ENSBMSG00010003531 #27	PCSK5 (ENSBMSG00010003436) #28	ENSBMSG00010003413 #29	NMRK1 (ENSBMSG00010003405) #30	ENSBMSG00010003397	CARNMT1 (ENSBMSG00010003386) #31	C9orf40 (ENSBMSG00010003380) #33	TRPM6 (ENSBMSG00010003340) #34	RORB (ENSBMSG00010003300) #35	ENSBMSG00010003286
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##9	ENSGT00950000183043.a.b.b.a.a.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A #15	ENSGT00390000013287.t #16	ENSGT00940000161347 #19	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.v.a.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00910000148416	ENSGT00390000005323 #31	ENSGT00390000001325.a #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Sperm whale	MODERN SPECIES	20	FANCG (ENSPCTG00005000387)	VCP (ENSPCTG00005000426)	C9orf131 (ENSPCTG00005000462)	DNAJB5 (ENSPCTG00005000482)	ENSPCTG00005000497	PHF24 (ENSPCTG00005000516)	TLE1 (ENSPCTG00005000556) #11	ENSPCTG00005000593	TLE4 (ENSPCTG00005000639) #14	ENSPCTG00005000680	PSAT1 (ENSPCTG00005000704) #15	ENSPCTG00005000736 #16	ENSPCTG00005000743 #16	GNAQ (ENSPCTG00005000756) #19	ENSPCTG00005000769	GNA14 (ENSPCTG00005000786) #22	VPS13A (ENSPCTG00005000866) #23	ENSPCTG00005000922	FOXB2 (ENSPCTG00005000930) #24	PRUNE2 (ENSPCTG00005000981) #25	GCNT1 (ENSPCTG00005001079) #26	ENSPCTG00005001091	RFK (ENSPCTG00005001107) #27	PCSK5 (ENSPCTG00005001143) #28	OSTF1 (ENSPCTG00005001197) #29	NMRK1 (ENSPCTG00005001209) #30	ENSPCTG00005001226	CARNMT1 (ENSPCTG00005001249) #31	C9H9orf40 (ENSPCTG00005001272) #33	TRPM6 (ENSPCTG00005001419) #34	RORB (ENSPCTG00005001849) #35
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##9	ENSGT00950000183043.a.b.b.a.a.b ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A.e #15	ENSGT00390000013287.t #16	ENSGT00940000161347 #19	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.v.a.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325.a #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Dolphin	MODERN SPECIES	2753																GNA14 (ENSTTRG00000011603) #22	VPS13A (ENSTTRG00000011573) #23	FOXB2 (ENSTTRG00000011568) #24
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00390000017004.a.a.l	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A.e #15	ENSGT00390000013287.t #16	ENSGT00940000161347 #19	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.v.a.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325.a #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Vaquita	MODERN SPECIES	17	ENSPSNG00000019306	ENSPSNG00000019344	DNAJB5 (ENSPSNG00000019366)	PHF24 (ENSPSNG00000019479)	ENSPSNG00000019507 ##9	ENSPSNG00000019554	ENSPSNG00000019585 ##9	ENSPSNG00000019680 ##9	ENSPSNG00000019722	TLE1 (ENSPSNG00000019950) #11	TLE4 (ENSPSNG00000020039) #14	ENSPSNG00000020147	PSAT1 (ENSPSNG00000020230) #15	ENSPSNG00000020316 #16	GNAQ (ENSPSNG00000020419) #19	GNA14 (ENSPSNG00000020441) #22	VPS13A (ENSPSNG00000020544) #23	ENSPSNG00000020679	ENSPSNG00000020710	FOXB2 (ENSPSNG00000020723) #24	ENSPSNG00000020742 #25	GCNT1 (ENSPSNG00000020765) #26	ENSPSNG00000020791 #27	PCSK5 (ENSPSNG00000020871) #28	ENSPSNG00000020965 #29	NMRK1 (ENSPSNG00000021002) #30	CARNMT1 (ENSPSNG00000021060) #31	C9orf40 (ENSPSNG00000021139) #33	TRPM6 (ENSPSNG00000021209) #34	ENSPSNG00000021377	RORB (ENSPSNG00000021397) #35
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##9	ENSGT00950000183043.b.b.g.a ##9	ENSGT00390000017004.a.a.l	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A.e #15	ENSGT00390000013287.t #16	ENSGT00940000161347 #19	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.v.a.a #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325.a #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Narwhal	MODERN SPECIES	312	ENSMMNG00015016439 ##9	ENSMMNG00015016418	ENSMMNG00015016384 ##9	ENSMMNG00015016311	ENSMMNG00015016295 ##9	TLE1 (ENSMMNG00015016128) #11	ENSMMNG00015016069	ENSMMNG00015016037	ENSMMNG00015015982	TLE4 (ENSMMNG00015015825) #14	ENSMMNG00015015725	PSAT1 (ENSMMNG00015015696) #15	ENSMMNG00015015512 #16	GNAQ (ENSMMNG00015015412) #19	ENSMMNG00015015399	GNA14 (ENSMMNG00015015382) #22	ENSMMNG00015015370	VPS13A (ENSMMNG00015015293) #23	FOXB2 (ENSMMNG00015015204) #24	ENSMMNG00015015183 #25	ENSMMNG00015015151 #25	ENSMMNG00015015130 #27	PCSK5 (ENSMMNG00015014930) #28	ENSMMNG00015014836 #29	NMRK1 (ENSMMNG00015014803) #30	CARNMT1 (ENSMMNG00015014708) #31	ENSMMNG00015014689 #33	TRPM6 (ENSMMNG00015014567) #34	RORB (ENSMMNG00015014483) #35	ANXA1 (ENSMMNG00015014451) #36	ALDH1A1 (ENSMMNG00015014430)
Beluga whale	MODERN SPECIES	50	VCP (ENSDLEG00000021246)	ENSDLEG00000021251	DNAJB5 (ENSDLEG00000021254)	PHF24 (ENSDLEG00000021258)	ENSDLEG00000021261 ##9	ENSDLEG00000021264	ENSDLEG00000021267 ##9	ENSDLEG00000021271	TLE1 (ENSDLEG00000021275) #11	ENSDLEG00000021281	TLE4 (ENSDLEG00000021283) #14	ENSDLEG00000021285	ENSDLEG00000021289 #15	ENSDLEG00000021309 #16	GNAQ (ENSDLEG00000021362) #19	ENSDLEG00000021366 #22	VPS13A (ENSDLEG00000021392) #23	ENSDLEG00000008006	FOXB2 (ENSDLEG00000008017) #24	PRUNE2 (ENSDLEG00000008030) #25	GCNT1 (ENSDLEG00000008169) #26	RFK (ENSDLEG00000008189) #27	PCSK5 (ENSDLEG00000008227) #28	ENSDLEG00000008342 #29	NMRK1 (ENSDLEG00000008464) #30	CARNMT1 (ENSDLEG00000008504) #31	CUNH9orf40 (ENSDLEG00000008530) #33	TRPM6 (ENSDLEG00000008592) #34	RORB (ENSDLEG00000008845) #35	ANXA1 (ENSDLEG00000008888) #36	ALDH1A1 (ENSDLEG00000008942)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Carnivora	ANCESTRAL SPECIES	25	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Caniformia	ANCESTRAL SPECIES	29	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Caniformia_b	ANCESTRAL SPECIES	32	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Ursidae	ANCESTRAL SPECIES	43	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.l #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221.r #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Ursus	ANCESTRAL SPECIES	280											ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.k #23
American black bear	MODERN SPECIES	5259																ENSUAMG00000020040 #22	ENSUAMG00000020043 #23
Polar bear	MODERN SPECIES	171										TLE1 (ENSUMAG00000023213) #11	ENSUMAG00000023163	TLE4 (ENSUMAG00000023158) #14	PSAT1 (ENSUMAG00000023147) #15	CEP78 (ENSUMAG00000023079) #16	GNAQ (ENSUMAG00000023048) #19	GNA14 (ENSUMAG00000023042) #22	ENSUMAG00000023039	VPS13A (ENSUMAG00000022379) #23	ENSUMAG00000022179 #25	ENSUMAG00000022172 #25	GCNT1 (ENSUMAG00000022168) #26	RFK (ENSUMAG00000022167) #27	ENSUMAG00000022155 #28	OSTF1 (ENSUMAG00000022148) #29	ENSUMAG00000022147 #30	CARNMT1 (ENSUMAG00000022143) #31	TRPM6 (ENSUMAG00000022132) #34	RORB (ENSUMAG00000022082) #35	ANXA1 (ENSUMAG00000022067) #36	ENSUMAG00000022048	ENSUMAG00000021983
Giant Panda	MODERN SPECIES	8	NTRK2 (ENSAMEG00000003994)	SLC28A3 (ENSAMEG00000003963)	RMI1 (ENSAMEG00000019422)	HNRNPK (ENSAMEG00000003926)	C9orf64 (ENSAMEG00000003917)	KIF27 (ENSAMEG00000003891)	GKAP1 (ENSAMEG00000003861)	UBQLN1 (ENSAMEG00000003825)	IDNK (ENSAMEG00000003818)	FRMD3 (ENSAMEG00000003807)	RASEF (ENSAMEG00000009467) #7	TLE1 (ENSAMEG00000014488) #11	TLE4 (ENSAMEG00000008536) #14	PSAT1 (ENSAMEG00000006898) #15	GNAQ (ENSAMEG00000005271) #19	GNA14 (ENSAMEG00000005279) #22	VPS13A (ENSAMEG00000005296) #23	ENSAMEG00000023684 #24	PRUNE2 (ENSAMEG00000003568) #25	GCNT1 (ENSAMEG00000019017) #26	RFK (ENSAMEG00000003553) #27	PCSK5 (ENSAMEG00000003447) #28	OSTF1 (ENSAMEG00000005324) #29	NMRK1 (ENSAMEG00000005312) #30	CARNMT1 (ENSAMEG00000005299) #31	C9orf40 (ENSAMEG00000019087) #33	TRPM6 (ENSAMEG00000015683) #34	RORB (ENSAMEG00000015664) #35	ANXA1 (ENSAMEG00000015540) #36	ENSAMEG00000025347	TMC1 (ENSAMEG00000007299)
Mustelinae	ANCESTRAL SPECIES	87												ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Ferret	MODERN SPECIES	332										ENSMPUG00000012594	TLE4 (ENSMPUG00000012590) #14	ENSMPUG00000012588	PSAT1 (ENSMPUG00000012566) #15	CEP78 (ENSMPUG00000012559) #16	GNAQ (ENSMPUG00000012554) #19	GNA14 (ENSMPUG00000012547) #22	VPS13A (ENSMPUG00000012524) #23	FOXB2 (ENSMPUG00000012521) #24	PRUNE2 (ENSMPUG00000012517) #25	GCNT1 (ENSMPUG00000018578) #26	RFK (ENSMPUG00000012511) #27	PCSK5 (ENSMPUG00000012343) #28	ENSMPUG00000018576	OSTF1 (ENSMPUG00000012340) #29	NMRK1 (ENSMPUG00000012337) #30	CARNMT1 (ENSMPUG00000012334) #31
American mink	MODERN SPECIES	72										ENSNVIG00000014390	TLE4 (ENSNVIG00000014309) #14	PSAT1 (ENSNVIG00000014279) #15	CEP78 (ENSNVIG00000013964) #16	GNAQ (ENSNVIG00000013949) #19	ENSNVIG00000013946	GNA14 (ENSNVIG00000013931) #22	VPS13A (ENSNVIG00000012690) #23	FOXB2 (ENSNVIG00000012653) #24	PRUNE2 (ENSNVIG00000012503) #25	GCNT1 (ENSNVIG00000012487) #26	RIFK (ENSNVIG00000012475) #27	PCSK5 (ENSNVIG00000012403) #28	OSTF1 (ENSNVIG00000012393) #29	NMRK1 (ENSNVIG00000012371) #30	CARNMT1 (ENSNVIG00000012354) #31	C9orf40 (ENSNVIG00000012345) #33	TRPM6 (ENSNVIG00000011669) #34	RORB (ENSNVIG00000011617) #35	ENSNVIG00000011556 #36	ALDH1A1 (ENSNVIG00000011532)	TMC1 (ENSNVIG00000011459)
Canidae	ANCESTRAL SPECIES	47	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.g #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000153305.d.cb.a.b	ENSGT00940000155221 #36	ENSGT00940000154609
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000157487.ib	ENSGT01100000263605.i.a	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00950000182805.a.a.a.b.j.k.a	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A.g #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000153305.d.cb.a.b	ENSGT00940000155221 #36	ENSGT00940000154609
Dog	MODERN SPECIES		GKAP1 (ENSCAFG00845006032)	UBQLN1 (ENSCAFG00845006162)	IDNK (ENSCAFG00845006259)	FRMD3 (ENSCAFG00845006384)	RASEF (ENSCAFG00845006700) #7	ENSCAFG00845006862 #9	TLE1 (ENSCAFG00845007046) #11	ENSCAFG00845007319	ENSCAFG00845007343	ENSCAFG00845007360	ENSCAFG00845007380	TLE4 (ENSCAFG00845007658) #14	PSAT1 (ENSCAFG00845008158) #15	CEP78 (ENSCAFG00845008575) #16	GNAQ (ENSCAFG00845009564) #19	GNA14 (ENSCAFG00845009597) #22	VPS13A (ENSCAFG00845009740) #23	FOXB2 (ENSCAFG00845010290) #24	PRUNE2 (ENSCAFG00845010363) #25	GCNT1 (ENSCAFG00845010790) #26	RFK (ENSCAFG00845010840) #27	PCSK5 (ENSCAFG00845010995) #28	ENSCAFG00845011478	ENSCAFG00845011513 #29	ENSCAFG00845011554 #29	NMRK1 (ENSCAFG00845011585) #30	CARNMT1 (ENSCAFG00845011707) #31	C1H9orf40 (ENSCAFG00845011724) #33	TRPM6 (ENSCAFG00845011822) #34	RORB (ENSCAFG00845012330) #35	ENSCAFG00845012398
Dingo	MODERN SPECIES	125	IDNK (ENSCAFG00020023839)	FRMD3 (ENSCAFG00020023845)	RASEF (ENSCAFG00020023859) #7	ENSCAFG00020023896	ENSCAFG00020023897	ENSCAFG00020023899 #9	TLE1 (ENSCAFG00020023903) #11	ENSCAFG00020023907	ENSCAFG00020023908	ENSCAFG00020023910	ENSCAFG00020023912	TLE4 (ENSCAFG00020023935) #14	ENSCAFG00020024577 #15	CEP78 (ENSCAFG00020024607) #16	GNAQ (ENSCAFG00020024672) #19	GNA14 (ENSCAFG00020024695) #22	ENSCAFG00020024709 #23	ENSCAFG00020024713 #23	ENSCAFG00020024717 #24	ENSCAFG00020024719	ENSCAFG00020024730 #25	ENSCAFG00020024732 #25	GCNT1 (ENSCAFG00020024738) #26	RFK (ENSCAFG00020024745) #27	PCSK5 (ENSCAFG00020024848) #28	ENSCAFG00020025484	ENSCAFG00020025485	ENSCAFG00020025486	OSTF1 (ENSCAFG00020025488) #29	NMRK1 (ENSCAFG00020025490) #30	ENSCAFG00020025491 #31
Red fox	MODERN SPECIES	37										ENSVVUG00000001369	ENSVVUG00000001377	TLE4 (ENSVVUG00000001430) #14	ENSVVUG00000001473 #15	CEP78 (ENSVVUG00000001495) #16	GNAQ (ENSVVUG00000001540) #19	GNA14 (ENSVVUG00000001563) #22	VPS13A (ENSVVUG00000001749) #23	ENSVVUG00000001950 #23	ENSVVUG00000001964 #24	ENSVVUG00000001998 #25	PRUNE2 (ENSVVUG00000002061) #25	RFK (ENSVVUG00000002092) #27	PCSK5 (ENSVVUG00000002152) #28	OSTF1 (ENSVVUG00000002259) #29	NMRK1 (ENSVVUG00000002291) #30	ENSVVUG00000002307	CARNMT1 (ENSVVUG00000002327) #31	ENSVVUG00000002351	TRPM6 (ENSVVUG00000002363) #34	RORB (ENSVVUG00000002470) #35	ENSVVUG00000003173
Felidae	ANCESTRAL SPECIES	28	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00390000018085.a.b.b	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Panthera	ANCESTRAL SPECIES	34	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00390000018085.a.b.b	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Panthera_a	ANCESTRAL SPECIES	35	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00390000018085.a.b.b	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000157455.b.b.b	ENSGT00940000154609
lion	MODERN SPECIES	13	RMI1 (ENSPLOG00000013722)	HNRNPK (ENSPLOG00000013759)	C9orf64 (ENSPLOG00000013829)	KIF27 (ENSPLOG00000013951)	GKAP1 (ENSPLOG00000014120)	UBQLN1 (ENSPLOG00000014300)	IDNK (ENSPLOG00000014593)	FRMD3 (ENSPLOG00000014784)	RASEF (ENSPLOG00000005557) #7	TLE1 (ENSPLOG00000005932) #11	TLE4 (ENSPLOG00000006108) #14	ENSPLOG00000006291	PSAT1 (ENSPLOG00000006318) #15	CEP78 (ENSPLOG00000006418) #16	GNAQ (ENSPLOG00000006541) #19	GNA14 (ENSPLOG00000006582) #22	VPS13A (ENSPLOG00000006980) #23	FOXB2 (ENSPLOG00000008702) #24	PRUNE2 (ENSPLOG00000008778) #25	GCNT1 (ENSPLOG00000009043) #26	RFK (ENSPLOG00000009075) #27	PCSK5 (ENSPLOG00000009159) #28	OSTF1 (ENSPLOG00000009605) #29	NMRK1 (ENSPLOG00000009658) #30	CARNMT1 (ENSPLOG00000009718) #31	C9orf40 (ENSPLOG00000009758) #33	TRPM6 (ENSPLOG00000009865) #34	RORB (ENSPLOG00000010628) #35	ANXA1 (ENSPLOG00000010824) #36	ENSPLOG00000010872	ALDH1A1 (ENSPLOG00000010882)
leopard	MODERN SPECIES	42											TLE4 (ENSPPRG00000002657) #14	ENSPPRG00000020842	PSAT1 (ENSPPRG00000000680) #15	CEP78 (ENSPPRG00000022688) #16	GNAQ (ENSPPRG00000023191) #19	GNA14 (ENSPPRG00000023254) #22	ENSPPRG00000023314	VPS13A (ENSPPRG00000023867) #23	ENSPPRG00000019426	ENSPPRG00000018788 #25	ENSPPRG00000018607 #25	GCNT1 (ENSPPRG00000020438) #26	RFK (ENSPPRG00000018334) #27	PCSK5 (ENSPPRG00000015616) #28	OSTF1 (ENSPPRG00000014712) #29	NMRK1 (ENSPPRG00000013152) #30	CARNMT1 (ENSPPRG00000012920) #31	ENSPPRG00000020310	C9orf40 (ENSPPRG00000012911) #33	ENSPPRG00000020296	TRPM6 (ENSPPRG00000012646) #34
Tiger	MODERN SPECIES	101												TLE4 (ENSPTIG00000019084) #14	PSAT1 (ENSPTIG00000018344) #15	CEP78 (ENSPTIG00000015052) #16	GNAQ (ENSPTIG00000013977) #19	GNA14 (ENSPTIG00000013203) #22	VPS13A (ENSPTIG00000019104) #23	ENSPTIG00000018318 #25	ENSPTIG00000005329 #25	ENSPTIG00000017898 #25	RFK (ENSPTIG00000016018) #27	PCSK5 (ENSPTIG00000010972) #28	OSTF1 (ENSPTIG00000009600) #29	NMRK1 (ENSPTIG00000007642) #30	CARNMT1 (ENSPTIG00000007361) #31	TRPM6 (ENSPTIG00000018404) #34	RORB (ENSPTIG00000017145) #35	ANXA1 (ENSPTIG00000016582) #36	ALDH1A1 (ENSPTIG00000015084)	TMC1 (ENSPTIG00000012847)	ZFAND5 (ENSPTIG00000012129)
Cat	MODERN SPECIES	244	RMI1 (ENSFCAG00000014864)	HNRNPK (ENSFCAG00000014862)	CD4H9orf64 (ENSFCAG00000035394)	KIF27 (ENSFCAG00000013331)	GKAP1 (ENSFCAG00000031248)	IDNK (ENSFCAG00000000492)	UBQLN1 (ENSFCAG00000015049)	FRMD3 (ENSFCAG00000023456)	RASEF (ENSFCAG00000002416) #7	TLE1 (ENSFCAG00000003893) #11	TLE4 (ENSFCAG00000002339) #14	ENSFCAG00000031069	PSAT1 (ENSFCAG00000024154) #15	CEP78 (ENSFCAG00000007763) #16	GNAQ (ENSFCAG00000024503) #19	GNA14 (ENSFCAG00000008471) #22	VPS13A (ENSFCAG00000000749) #23	FOXB2 (ENSFCAG00000046576) #24	PRUNE2 (ENSFCAG00000029198) #25	GCNT1 (ENSFCAG00000030141) #26	RFK (ENSFCAG00000039390) #27	PCSK5 (ENSFCAG00000027896) #28	OSTF1 (ENSFCAG00000022374) #29	NMRK1 (ENSFCAG00000035848) #30	CARNMT1 (ENSFCAG00000028436) #31	C9orf40 (ENSFCAG00000030577) #33	TRPM6 (ENSFCAG00000011422) #34	RORB (ENSFCAG00000011421) #35	ANXA1 (ENSFCAG00000015263) #36	ALDH1A1 (ENSFCAG00000009133)	TMC1 (ENSFCAG00000043213)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Equus	ANCESTRAL SPECIES	70	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b.i.b.a.b.b.b #9	ENSGT00950000183043.a.b.b.a.b.i.a.a.a #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00390000015537.x #27	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.w #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31
Donkey	MODERN SPECIES	22	ENSEASG00005009587	ZFAND5 (ENSEASG00005009586)	TMC1 (ENSEASG00005036859)	ALDH1A1 (ENSEASG00005009584)	ANXA1 (ENSEASG00005007925) #36	RORB (ENSEASG00005007922) #35	TRPM6 (ENSEASG00005007843) #34	ENSEASG00005007794 #33	ENSEASG00005027501 #9	ENSEASG00005005051 #11	TLE4 (ENSEASG00005005032) #14	PSAT1 (ENSEASG00005005021) #15	CEP78 (ENSEASG00005005009) #16	ENSEASG00005005001 #27	GNAQ (ENSEASG00005004998) #19	GNA14 (ENSEASG00005004986) #22	VPS13A (ENSEASG00005004923) #23	ENSEASG00005004789 #24	ENSEASG00005034399	PRUNE2 (ENSEASG00005004758) #25	GCNT1 (ENSEASG00005030619) #26	ENSEASG00005004752 #27	PCSK5 (ENSEASG00005004745) #28	OSTF1 (ENSEASG00005004735) #29	ENSEASG00005004722 #30	ENSEASG00005004711 #31	ENSEASG00005033852	ENSEASG00005024562	ENSEASG00005031255	ENSEASG00005035670	ENSEASG00005034160
Horse	MODERN SPECIES	15	ENSECAG00000035038	ENSECAG00000009881	ENSECAG00000034991	ENSECAG00000052440	FRMD3 (ENSECAG00000007878)	ENSECAG00000044353	RASEF (ENSECAG00000000324) #7	ENSECAG00000018120 #9	ENSECAG00000035266 #9	TLE1 (ENSECAG00000013680) #11	TLE4 (ENSECAG00000009982) #14	PSAT1 (ENSECAG00000017903) #15	CEP78 (ENSECAG00000012634) #16	ENSECAG00000028496 #27	GNAQ (ENSECAG00000018363) #19	GNA14 (ENSECAG00000020518) #22	VPS13A (ENSECAG00000020865) #23	ENSECAG00000033811 #24	PRUNE2 (ENSECAG00000010004) #25	GCNT1 (ENSECAG00000020201) #26	ENSECAG00000037215 #27	PCSK5 (ENSECAG00000006788) #28	OSTF1 (ENSECAG00000019624) #29	NMRK1 (ENSECAG00000007336) #30	CARNMT1 (ENSECAG00000013964) #31	ANXA1 (ENSECAG00000015794) #36	ENSECAG00000038056 ##9	ENSECAG00000041820 #9	RORB (ENSECAG00000024312) #35	TRPM6 (ENSECAG00000015942) #34	ENSECAG00000052040
Chiroptera	ANCESTRAL SPECIES	40	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Megabat	MODERN SPECIES	6117																GNA14 (ENSPVAG00000012213) #22
Microchiroptera	ANCESTRAL SPECIES	36	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.ib	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.b #9	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Greater horseshoe bat	MODERN SPECIES	3	C9orf64 (ENSRFEG00010014739)	KIF27 (ENSRFEG00010014622)	UBQLN1 (ENSRFEG00010014096)	IDNK (ENSRFEG00010013969)	FRMD3 (ENSRFEG00010013516)	RASEF (ENSRFEG00010013434) #7	ENSRFEG00010013409	TLE1 (ENSRFEG00010013065) #11	ENSRFEG00010012998	TLE4 (ENSRFEG00010012773) #14	ENSRFEG00010012640 #15	CEP78 (ENSRFEG00010012426) #16	GNAQ (ENSRFEG00010012381) #19	ENSRFEG00010012361	ENSRFEG00010012344	GNA14 (ENSRFEG00010012288) #22	ENSRFEG00010012234	VPS13A (ENSRFEG00010011976) #23	FOXB2 (ENSRFEG00010011890) #24	PRUNE2 (ENSRFEG00010011665) #25	GCNT1 (ENSRFEG00010011618) #26	RFK (ENSRFEG00010011567) #27	PCSK5 (ENSRFEG00010011327) #28	OSTF1 (ENSRFEG00010011253) #29	NMRK1 (ENSRFEG00010011161) #30	CARNMT1 (ENSRFEG00010011074) #31	C9orf40 (ENSRFEG00010011017) #33	TRPM6 (ENSRFEG00010009962) #34	RORB (ENSRFEG00010009768) #35	ENSRFEG00010009637 #36	ENSRFEG00010009582
Microbat	MODERN SPECIES	968	RASEF (ENSMLUG00000013108) #7	ENSMLUG00000022623 #9	ENSMLUG00000022889 ##9	TLE1 (ENSMLUG00000003088) #11	ENSMLUG00000026478	ENSMLUG00000022957	TLE4 (ENSMLUG00000005564) #14	ENSMLUG00000026096	ENSMLUG00000029964	ENSMLUG00000022667 #9	ENSMLUG00000026585	PSAT1 (ENSMLUG00000010261) #15	CEP78 (ENSMLUG00000010238) #16	ENSMLUG00000006026	GNAQ (ENSMLUG00000003741) #19	GNA14 (ENSMLUG00000003737) #22	VPS13A (ENSMLUG00000003688) #23	PRUNE2 (ENSMLUG00000001535) #25	GCNT1 (ENSMLUG00000001534) #26	RFK (ENSMLUG00000015223) #27	PCSK5 (ENSMLUG00000015196) #28	OSTF1 (ENSMLUG00000008299) #29	NMRK1 (ENSMLUG00000008290) #30	ENSMLUG00000008278 #31	TRPM6 (ENSMLUG00000006442) #34	ENSMLUG00000023224	RORB (ENSMLUG00000006436) #35	ENSMLUG00000006572	ANXA1 (ENSMLUG00000000473) #36	ENSMLUG00000022963 #37	ALDH1A1 (ENSMLUG00000007209)
Atlantogenata	ANCESTRAL SPECIES	67	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT00950000183043.a.b.b.a.a.b ##9	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Afrotheria	ANCESTRAL SPECIES	75	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Afrotheria_a	ANCESTRAL SPECIES	74	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00390000001325 #33	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609.ob.b
Hyrax	MODERN SPECIES	6921																GNA14 (ENSPCAG00000006731) #22	VPS13A (ENSPCAG00000006360) #23
Elephant	MODERN SPECIES	472	KIF27 (ENSLAFG00000017658)	GKAP1 (ENSLAFG00000011867)	UBQLN1 (ENSLAFG00000016447)	IDNK (ENSLAFG00000026646)	FRMD3 (ENSLAFG00000007148)	RASEF (ENSLAFG00000010552) #7	TLE1 (ENSLAFG00000004803) #11	ENSLAFG00000031777	ENSLAFG00000014287	TLE4 (ENSLAFG00000012471) #14	ENSLAFG00000029717	ENSLAFG00000030525 #9	PSAT1 (ENSLAFG00000017917) #15	CEP78 (ENSLAFG00000012846) #16	GNAQ (ENSLAFG00000001575) #19	GNA14 (ENSLAFG00000008566) #22	VPS13A (ENSLAFG00000008547) #23	FOXB2 (ENSLAFG00000022363) #24	ENSLAFG00000018547 #25	GCNT1 (ENSLAFG00000021806) #26	ENSLAFG00000011147 #27	PCSK5 (ENSLAFG00000015309) #28	OSTF1 (ENSLAFG00000015441) #29	NMRK1 (ENSLAFG00000005888) #30	CARNMT1 (ENSLAFG00000007066) #31	C9orf40 (ENSLAFG00000007065) #33	ENSLAFG00000028704 #34	ENSLAFG00000004612 #34	RORB (ENSLAFG00000012757) #35	ANXA1 (ENSLAFG00000009163) #36	ENSLAFG00000029788 #37
Tenrec	MODERN SPECIES	7556															GNAQ (ENSETEG00000000740) #19	GNA14 (ENSETEG00000000736) #22
Xenarthra	ANCESTRAL SPECIES	517									ENSGT00950000183043.a.b.b.a.a.b ##9	ENSGT00950000183043.a.b.b.a.b #9	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23
Armadillo	MODERN SPECIES	3656									ENSDNOG00000048345 ##9	ENSDNOG00000036520 #9	TLE1 (ENSDNOG00000000937) #11	TLE4 (ENSDNOG00000011349) #14	PSAT1 (ENSDNOG00000034862) #15	CEP78 (ENSDNOG00000002843) #16	ENSDNOG00000006353	GNA14 (ENSDNOG00000006349) #22	VPS13A (ENSDNOG00000006286) #23	ENSDNOG00000031463	ENSDNOG00000046646	FOXB2 (ENSDNOG00000041384) #24
Sloth	MODERN SPECIES	7318																GNA14 (ENSCHOG00000006744) #22	VPS13A (ENSCHOG00000006671) #23
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287.db.a #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.fb	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287.db.a #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a
Diprotodontia	ANCESTRAL SPECIES	21	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.fb	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287.db.a #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a
Diprotodontia_a	ANCESTRAL SPECIES	17	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.a.a	ENSGT00390000002374	ENSGT00940000157487.fb.a	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287.db.a #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1066	ENSVURG00010019808	ENSVURG00010019847	ENSVURG00010019852	ENSVURG00010019882	ENSVURG00010019908	ENSVURG00010019946	ENSVURG00010019961	ENSVURG00010020018 #7	ENSVURG00010020065	ENSVURG00010020081 #11	ENSVURG00010020103	ENSVURG00010020119 #14	ENSVURG00010020163 #15	ENSVURG00010000421 #16	GNAQ (ENSVURG00010000588) #19	ENSVURG00010000975 #22	ENSVURG00010001020 #23	ENSVURG00010001103 #24	ENSVURG00010001165 #25	ENSVURG00010001227 #25	ENSVURG00010001214 #25	GCNT1 (ENSVURG00010001238) #26	ENSVURG00010001354	ENSVURG00010001572	ENSVURG00010001697	ENSVURG00010001751	ENSVURG00010001761	ENSVURG00010001782	ENSVURG00010001827	ENSVURG00010001888	ENSVURG00010001910
Common wonbat	MODERN SPECIES	1066	ENSVURG00010015615	ENSVURG00010015628	ENSVURG00010015650	ENSVURG00010015676	ENSVURG00010015680	ENSVURG00010015703	ENSVURG00010015728	ENSVURG00010015787 #7	ENSVURG00010016176	ENSVURG00010016194	ENSVURG00010016210 #11	ENSVURG00010016243	ENSVURG00010016303 #14	ENSVURG00010016375 #15	ENSVURG00010016387 #16	ENSVURG00010016447 #22	ENSVURG00010016470	ENSVURG00010016491 #23	ENSVURG00010016551 #24	ENSVURG00010016561 #25	ENSVURG00010016577 #25	ENSVURG00010016612	ENSVURG00010016646	ENSVURG00010016686	ENSVURG00010016697	ENSVURG00010016707	ENSVURG00010016712	ENSVURG00010016728	ENSVURG00010016739	ENSVURG00010016751	ENSVURG00010016764
koala	MODERN SPECIES	59												TLE4 (ENSPCIG00000006249) #14	PSAT1 (ENSPCIG00000012123) #15	ENSPCIG00000012127 #16	GNAQ (ENSPCIG00000012132) #19	GNA14 (ENSPCIG00000030641) #22	VPS13A (ENSPCIG00000010866) #23	FOXB2 (ENSPCIG00000031696) #24	ENSPCIG00000021277 #25	ENSPCIG00000014745 #25	ENSPCIG00000014743 #25	ANKS6 (ENSPCIG00000000722)	ENSPCIG00000000733	ENSPCIG00000000782	TGFBR1 (ENSPCIG00000000853)	ALG2 (ENSPCIG00000000867)	SEC61B (ENSPCIG00000000880)	ENSPCIG00000014397	NR4A3 (ENSPCIG00000025397)	ENSPCIG00000026489	ERP44 (ENSPCIG00000026488)
Wallaby	MODERN SPECIES	6136																GNA14 (ENSMEUG00000015944) #22
Tasmanian devil	MODERN SPECIES		RMI1 (ENSSHAG00000017088)	HNRNPK (ENSSHAG00000017109)	C9orf64 (ENSSHAG00000017219)	KIF27 (ENSSHAG00000017257)	GKAP1 (ENSSHAG00000027385)	UBQLN1 (ENSSHAG00000017673)	IDNK (ENSSHAG00000022655)	FRMD3 (ENSSHAG00000029377)	ENSSHAG00000023779	RASEF (ENSSHAG00000031366) #7	TLE1 (ENSSHAG00000010221) #11	TLE4 (ENSSHAG00000017709) #14	PSAT1 (ENSSHAG00000018888) #15	ENSSHAG00000018907 #16	GNAQ (ENSSHAG00000009733) #19	GNA14 (ENSSHAG00000027605) #22	VPS13A (ENSSHAG00000003917) #23	ENSSHAG00000030882	FOXB2 (ENSSHAG00000027905) #24	ENSSHAG00000001230 #25	ENSSHAG00000029693 #25	ENSSHAG00000026570 #25	ENSSHAG00000003631 #26	ENSSHAG00000017605	ENSSHAG00000017474	COL15A1 (ENSSHAG00000016845)	TGFBR1 (ENSSHAG00000016699)	ALG2 (ENSSHAG00000021066)	SEC61B (ENSSHAG00000023694)	NR4A3 (ENSSHAG00000013487)	STX17 (ENSSHAG00000030239)
Opossum	MODERN SPECIES	5	ENSMODG00000044653	ENSMODG00000039525	ENSMODG00000051066	ENSMODG00000051332	ENSMODG00000045132	ENSMODG00000037285	ENSMODG00000016245	ENSMODG00000043875	ENSMODG00000047503	ENSMODG00000016240	ENSMODG00000049300	ENSMODG00000046248	PSAT1 (ENSMODG00000012960) #15	ENSMODG00000012952 #16	GNAQ (ENSMODG00000012943) #19	GNA14 (ENSMODG00000012932) #22	ENSMODG00000051183	ENSMODG00000012902 #23	ENSMODG00000049650 #23	FOXB2 (ENSMODG00000012804) #24	PRUNE2 (ENSMODG00000012786) #25	ANKS6 (ENSMODG00000012769)	GALNT12 (ENSMODG00000012753)	ENSMODG00000029358	ENSMODG00000049269	TGFBR1 (ENSMODG00000012679)	ALG2 (ENSMODG00000040576)	SEC61B (ENSMODG00000012664)	ENSMODG00000044791	ENSMODG00000027487	NR4A3 (ENSMODG00000012660)
Platypus	MODERN SPECIES	88	RMI1 (ENSOANG00000010899)	HNRNPK (ENSOANG00000014612)	C9orf64 (ENSOANG00000042188)	ENSOANG00000006741	GKAP1 (ENSOANG00000010900)	UBQLN1 (ENSOANG00000010928)	IDNK (ENSOANG00000037832)	FRMD3 (ENSOANG00000036670)	RASEF (ENSOANG00000010379) #7	TLE1 (ENSOANG00000020884) #11	TLE4 (ENSOANG00000007857) #14	PSAT1 (ENSOANG00000002968) #15	RPL8 (ENSOANG00000002646)	CEP78 (ENSOANG00000002647) #16	ENSOANG00000002649	GNA14 (ENSOANG00000037680) #22	ENSOANG00000050837	VPS13A (ENSOANG00000003028) #23	ENSOANG00000021049 #24	ENSOANG00000013582 #25	ENSOANG00000005175 #25	ENSOANG00000039000 #25	GCNT1 (ENSOANG00000005174) #26	RFK (ENSOANG00000048082) #27	ENSOANG00000040724 #28	OSTF1 (ENSOANG00000002022) #29	NMRK1 (ENSOANG00000011647) #30	CARNMT1 (ENSOANG00000041557) #31	TRPM6 (ENSOANG00000011650) #34	RORB (ENSOANG00000011655) #35	ANXA1 (ENSOANG00000013140) #36
Sauria	ANCESTRAL SPECIES	5	ENSGT00390000003774.b	ENSGT00390000009358	ENSGT00510000050177	ENSGT00940000154491.c	ENSGT00940000161506	ENSGT00390000014944.b	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35
Archosauria	ANCESTRAL SPECIES	31	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Aves	ANCESTRAL SPECIES	4	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
African ostrich	MODERN SPECIES	163																ENSSCUG00000000555 #22	VPS13A (ENSSCUG00000000477) #23	ENSSCUG00000000445 #25
Neognathae	ANCESTRAL SPECIES	19	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b.a.a	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000161055	ENSGT00940000153434.b.a.a	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.lb.a #27	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT00550000074816.B	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b.b	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742.b	ENSGT00940000156437.i.a	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.lb.a #27	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT01100000263829	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805
Golden eagle	MODERN SPECIES	91	RMI1 (ENSACCG00020013695)	ENSACCG00020013718	C9orf64 (ENSACCG00020013750)	ENSACCG00020013764	ENSACCG00020013784	GKAP1 (ENSACCG00020013838)	UBQLN1 (ENSACCG00020013863)	IDNK (ENSACCG00020013880)	FRMD3 (ENSACCG00020013964)	RASEF (ENSACCG00020014120) #7	TLE1 (ENSACCG00020014335) #11	TLE4 (ENSACCG00020014435) #14	PSAT1 (ENSACCG00020014490) #15	CEP78 (ENSACCG00020014520) #16	GNAQ (ENSACCG00020014556) #19	GNA14 (ENSACCG00020014570) #22	VPS13A (ENSACCG00020015054) #23	FOXB2 (ENSACCG00020015529) #24	ENSACCG00020015553 #25	ENSACCG00020015582 #25	GCNT1 (ENSACCG00020015597) #26	ENSACCG00020015611 #27	ENTREP1 (ENSACCG00020015643)	APBA1 (ENSACCG00020015667)	PTAR1 (ENSACCG00020015676)	MAMDC2 (ENSACCG00020015741)	ENSACCG00020015799	KLF9 (ENSACCG00020015824)	TRPM3 (ENSACCG00020015843)	ENSACCG00020015870	CEMIP2 (ENSACCG00020015901)
Kakapo	MODERN SPECIES	19	SLC28A3 (ENSSHBG00005020535)	RMI1 (ENSSHBG00005020541)	HNRNPK (ENSSHBG00005020544)	C9orf64 (ENSSHBG00005020551)	KIF27 (ENSSHBG00005020554)	ENSSHBG00005000104	ENSSHBG00005009843	ENSSHBG00005009867	IDNK (ENSSHBG00005009906)	FRMD3 (ENSSHBG00005009944)	RASEF (ENSSHBG00005009980) #7	TLE1 (ENSSHBG00005010062) #11	TLE4 (ENSSHBG00005010088) #14	PSAT1 (ENSSHBG00005010114) #15	ENSSHBG00005010138 #19	GNA14 (ENSSHBG00005010165) #22	VPS13A (ENSSHBG00005010243) #23	FOXB2 (ENSSHBG00005010328) #24	ENSSHBG00005010344 #25	ENSSHBG00005010378 #25	GCNT1 (ENSSHBG00005010414) #26	ENSSHBG00005010435 #27	ENTREP1 (ENSSHBG00005010461)	APBA1 (ENSSHBG00005010535)	PTAR1 (ENSSHBG00005010649)	MAMDC2 (ENSSHBG00005010809)	ENSSHBG00005011898	KLF9 (ENSSHBG00005011943)	TRPM3 (ENSSHBG00005012320)	CEMIP2 (ENSSHBG00005014315)	ABHD17B (ENSSHBG00005014339)
Galloanserae	ANCESTRAL SPECIES	18	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b.a.a	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Anatidae	ANCESTRAL SPECIES	12	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b.b	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT01100000263829	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805	ENSGT00390000017130
Pink-footed goose	MODERN SPECIES	138									RASEF (ENSABRG00000018279) #7	TLE1 (ENSABRG00000018269) #11	TLE4 (ENSABRG00000018244) #14	PSAT1 (ENSABRG00000018226) #15	CEP78 (ENSABRG00000018217) #16	ENSABRG00000018215	ENSABRG00000018214 #19	GNA14 (ENSABRG00000018151) #22	VPS13A (ENSABRG00000017386) #23
Duck	MODERN SPECIES	4281	HNRNPK (ENSAPLG00000010986)	C9orf64 (ENSAPLG00000020199)	ENSAPLG00000030886	GKAP1 (ENSAPLG00000014453)	UBQLN1 (ENSAPLG00000014441)	IDNK (ENSAPLG00000017965)	ENSAPLG00000026639	FRMD3 (ENSAPLG00000014312)	RASEF (ENSAPLG00000013969) #7	TLE1 (ENSAPLG00000012402) #11	ENSAPLG00000027958	TLE4 (ENSAPLG00000004314) #14	PSAT1 (ENSAPLG00000005388) #15	CEP78 (ENSAPLG00000005202) #16	GNAQ (ENSAPLG00000005161) #19	GNA14 (ENSAPLG00000004760) #22	VPS13A (ENSAPLG00000005010) #23	FOXB2 (ENSAPLG00000006208) #24	PRUNE2 (ENSAPLG00000020377) #25	ENSAPLG00000024975	GCNT1 (ENSAPLG00000025966) #26	RFK (ENSAPLG00000030187) #27	ENTREP1 (ENSAPLG00000008627)	ENSAPLG00000028514	APBA1 (ENSAPLG00000008905)	PTAR1 (ENSAPLG00000009255)	ENSAPLG00000027170	MAMDC2 (ENSAPLG00000009256)	ENSAPLG00000009355	KLF9 (ENSAPLG00000031066)	TRPM3 (ENSAPLG00000009788)
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b.a.a	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.sb #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708.d #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00390000016025.a	ENSGT00940000161055	ENSGT00940000153434.b.a.a	ENSGT00390000002374	ENSGT00940000157487.y	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537.sb #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708.d #35	ENSGT00940000155221 #36	ENSGT00940000154609	ENSGT01050000244942.b.a.a	ENSGT00940000156165.k.a
Chicken	MODERN SPECIES	131	RMI1 (ENSGALG00010014737)	HNRNPK (ENSGALG00010014677)	CZH9orf64 (ENSGALG00010014592)	KIF27 (ENSGALG00010014570)	GKAP1 (ENSGALG00010014537)	UBQLN1 (ENSGALG00010015628)	IDNK (ENSGALG00010015621)	FRMD3 (ENSGALG00010015589)	RASEF (ENSGALG00010015541) #7	ENSGALG00010016632	TLE1 (ENSGALG00010015766) #11	TLE4 (ENSGALG00010015946) #14	PSAT1 (ENSGALG00010015533) #15	CEP78 (ENSGALG00010015894) #16	GNAQ (ENSGALG00010015212) #19	GNA14 (ENSGALG00010015208) #22	VPS13A (ENSGALG00010015181) #23	FOXB2 (ENSGALG00010015144) #24	ENSGALG00010016898 #25	ENSGALG00010015138 #25	GCNT1 (ENSGALG00010015132) #26	RFK (ENSGALG00010015064) #27	PCSK5 (ENSGALG00010015038) #28	OSTF1 (ENSGALG00010015493) #29	NMRK1 (ENSGALG00010015466) #30	CARNMT1 (ENSGALG00010015413) #31	TRPM6 (ENSGALG00010015320) #34	RORB (ENSGALG00010015250) #35	ANXA1 (ENSGALG00010014114) #36	ALDH1A1 (ENSGALG00010014104)	TMC1 (ENSGALG00010015872)
Japanese quail	MODERN SPECIES	699	C9orf64 (ENSCJPG00005009409)	KIF27 (ENSCJPG00005009390)	ENSCJPG00005009388	UBQLN1 (ENSCJPG00005009387)	IDNK (ENSCJPG00005009386)	FRMD3 (ENSCJPG00005009385)	RASEF (ENSCJPG00005009383) #7	ENSCJPG00005009382	ENSCJPG00005009380	TLE1 (ENSCJPG00005009379) #11	TLE4 (ENSCJPG00005009372) #14	ENSCJPG00005009367	PSAT1 (ENSCJPG00005009365) #15	CEP78 (ENSCJPG00005009363) #16	GNAQ (ENSCJPG00005009359) #19	GNA14 (ENSCJPG00005009354) #22	VPS13A (ENSCJPG00005007910) #23	FOXB2 (ENSCJPG00005007899) #24	PRUNE2 (ENSCJPG00005007885) #25	GCNT1 (ENSCJPG00005007882) #26	ENSCJPG00005007880 #27	PCSK5 (ENSCJPG00005007863) #28	OSTF1 (ENSCJPG00005007842) #29	NMRK1 (ENSCJPG00005007841) #30	CARNMT1 (ENSCJPG00005007840) #31	ENSCJPG00005007839	TRPM6 (ENSCJPG00005007835) #34	RORB (ENSCJPG00005007829) #35	ANXA1 (ENSCJPG00005007826) #36	ALDH1A1 (ENSCJPG00005007817)	TMC1 (ENSCJPG00005007792)
Australian saltwater crocodile	MODERN SPECIES	67	SLC28A3 (ENSCPRG00005006926)	RMI1 (ENSCPRG00005006921)	HNRNPK (ENSCPRG00005006910)	C9orf64 (ENSCPRG00005006899)	KIF27 (ENSCPRG00005006887)	GKAP1 (ENSCPRG00005006877)	UBQLN1 (ENSCPRG00005006861)	IDNK (ENSCPRG00005006853)	FRMD3 (ENSCPRG00005006777)	RASEF (ENSCPRG00005006676) #7	TLE1 (ENSCPRG00005006631) #11	TLE4 (ENSCPRG00005006614) #14	PSAT1 (ENSCPRG00005006592) #15	CEP78 (ENSCPRG00005006576) #16	GNAQ (ENSCPRG00005006573) #19	GNA14 (ENSCPRG00005006556) #22	VPS13A (ENSCPRG00005006496) #23	PRUNE2 (ENSCPRG00005006454) #25	GCNT1 (ENSCPRG00005006444) #26	RFK (ENSCPRG00005006442) #27	PCSK5 (ENSCPRG00005006403) #28	ENSCPRG00005006385	OSTF1 (ENSCPRG00005006380) #29	NMRK1 (ENSCPRG00005006370) #30	CARNMT1 (ENSCPRG00005006362) #31	TRPM6 (ENSCPRG00005006349) #34	RORB (ENSCPRG00005006328) #35	ANXA1 (ENSCPRG00005006317) #36	ALDH1A1 (ENSCPRG00005006260)	TMC1 (ENSCPRG00005006240)	ZFAND5 (ENSCPRG00005006217)
Cryptodira	ANCESTRAL SPECIES	48										ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000171049	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c.a.b	ENSGT01000000214430.c.a.a.a.a	ENSGT01000000214430.c.b.b.b.b.b	ENSGT01000000214430.c.b.a.b.a.b	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000171049	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37
Emydidae	ANCESTRAL SPECIES	20	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c.a.b	ENSGT01000000214430.c.a.a.a.a	ENSGT01000000214430.c.b.b.b.b.b	ENSGT01000000214430.c.b.a.b.a.b.d	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000161347 #19	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000189515	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
painted turtle	MODERN SPECIES	705	ENSCPBG00000019022	ENSCPBG00000019023	ENSCPBG00000019024	ENSCPBG00000019027	ENSCPBG00000019028	ENSCPBG00000019030	ENSCPBG00000019034	ENSCPBG00000019035	RASEF (ENSCPBG00000019037) #7	TLE1 (ENSCPBG00000019082) #11	TLE4 (ENSCPBG00000019087) #14	PSAT1 (ENSCPBG00000019096) #15	CEP78 (ENSCPBG00000019104) #16	ENSCPBG00000019108	ENSCPBG00000019109	GNA14 (ENSCPBG00000019112) #22	VPS13A (ENSCPBG00000019204) #23	FOXB2 (ENSCPBG00000019707) #24	ENSCPBG00000019712 #25	ENSCPBG00000019728 #25	GCNT1 (ENSCPBG00000019732) #26	RFK (ENSCPBG00000019734) #27	ENSCPBG00000019735 #28	PCSK5 (ENSCPBG00000019742) #28	OSTF1 (ENSCPBG00000019756) #29	CARNMT1 (ENSCPBG00000019763) #31	ENSCPBG00000019771	TRPM6 (ENSCPBG00000019827) #34	RORB (ENSCPBG00000020082) #35	ANXA1 (ENSCPBG00000020089) #36	ENSCPBG00000020092 #37
Three-toed box turtle	MODERN SPECIES	50	ENSTMTG00000017693	MLLT3 (ENSTMTG00000017725)	ENSTMTG00000017737	FOCAD (ENSTMTG00000017986)	HACD4 (ENSTMTG00000020159)	ENSTMTG00000020167	ENSTMTG00000020174	RASEF (ENSTMTG00000020204) #7	TLE1 (ENSTMTG00000020394) #11	ENSTMTG00000020413 #14	ENSTMTG00000020432 #14	PSAT1 (ENSTMTG00000020439) #15	ENSTMTG00000020447	CEP78 (ENSTMTG00000020456) #16	GNAQ (ENSTMTG00000020463) #19	GNA14 (ENSTMTG00000020468) #22	VPS13A (ENSTMTG00000020491) #23	FOXB2 (ENSTMTG00000020568) #24	PRUNE2 (ENSTMTG00000020608) #25	GCNT1 (ENSTMTG00000020794) #26	RFK (ENSTMTG00000020802) #27	PCSK5 (ENSTMTG00000020815) #28	OSTF1 (ENSTMTG00000020837) #29	NMRK1 (ENSTMTG00000020856) #30	CARNMT1 (ENSTMTG00000020887) #31	ENSTMTG00000020895	TRPM6 (ENSTMTG00000003242) #34	RORB (ENSTMTG00000003307) #35	ANXA1 (ENSTMTG00000003349) #36	ENSTMTG00000003394 #37	ALDH1A1 (ENSTMTG00000003431)
Testudinidae	ANCESTRAL SPECIES	15	ENSGT01000000214430.c.b.a.a.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c.a.b	ENSGT01000000214430.c.a.a.a.a	ENSGT01000000214430.c.b.b.b.b.b	ENSGT01000000214430.c.b.a.b.a.b	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000171049	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005020719	ENSGEVG00005020720	ENSGEVG00005020725	ENSGEVG00005020726	ENSGEVG00005020731	RASEF (ENSGEVG00005020748) #7	TLE1 (ENSGEVG00005020765) #11	ENSGEVG00005020771	TLE4 (ENSGEVG00005020789) #14	ENSGEVG00005020844	ENSGEVG00005020845	PSAT1 (ENSGEVG00005020848) #15	CEP78 (ENSGEVG00005009089) #16	ENSGEVG00005009209	ENSGEVG00005009240	GNA14 (ENSGEVG00005009271) #22	VPS13A (ENSGEVG00005009336) #23	FOXB2 (ENSGEVG00005009541) #24	ENSGEVG00005009580 #25	ENSGEVG00005009642 #25	GCNT1 (ENSGEVG00005009784) #26	RFK (ENSGEVG00005009802) #27	ENSGEVG00005009826	PCSK5 (ENSGEVG00005009905) #28	OSTF1 (ENSGEVG00005010236) #29	NMRK1 (ENSGEVG00005010267) #30	CARNMT1 (ENSGEVG00005010329) #31	TRPM6 (ENSGEVG00005010374) #34	RORB (ENSGEVG00005010680) #35	ANXA1 (ENSGEVG00005010829) #36	ENSGEVG00005011063 #37
Abingdon island giant tortoise	MODERN SPECIES	1517													PSAT1 (ENSCABG00000010221) #15	CEP78 (ENSCABG00000010224) #16	ENSCABG00000010234	GNA14 (ENSCABG00000010237) #22	VPS13A (ENSCABG00000010278) #23	FOXB2 (ENSCABG00000012819) #24	KCTD4 (ENSCABG00000012822)	ENSCABG00000012823
Chinese turtle	MODERN SPECIES	1047													PSAT1 (ENSPSIG00000006099) #15	CEP78 (ENSPSIG00000008337) #16	ENSPSIG00000008891	GNA14 (ENSPSIG00000010004) #22	VPS13A (ENSPSIG00000011081) #23	PRUNE2 (ENSPSIG00000010175) #25
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00390000003364	ENSGT00940000158577	ENSGT00390000009358	ENSGT00510000050177	ENSGT00940000154491.c	ENSGT00940000161506	ENSGT00390000014944.b	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1616													PSAT1 (ENSSPUG00000015619) #15	CEP78 (ENSSPUG00000015513) #16	ENSSPUG00000015482	ENSSPUG00000015475 #22	ENSSPUG00000015465 #22	ENSSPUG00000015458	ENSSPUG00000015383 #23	ENSSPUG00000015353 ##23	ENSSPUG00000015344	ENSSPUG00000015326 #23	ENSSPUG00000015316	FOXB2 (ENSSPUG00000015308) #24	ENSSPUG00000015301 #25	ENSSPUG00000015265 #25	RFK (ENSSPUG00000015243) #27	PCSK5 (ENSSPUG00000015217) #28	OSTF1 (ENSSPUG00000015197) #29	NMRK1 (ENSSPUG00000015186) #30	CARNMT1 (ENSSPUG00000015140) #31
tuatara	MODERN SPECIES	1616												PSAT1 (ENSSPUG00000015619) #15	CEP78 (ENSSPUG00000015513) #16	ENSSPUG00000015482	ENSSPUG00000015475 #22	ENSSPUG00000015465 #22	ENSSPUG00000015458	ENSSPUG00000015383 #23	ENSSPUG00000015353 ##23	ENSSPUG00000015344	ENSSPUG00000015326 #23	ENSSPUG00000015316	FOXB2 (ENSSPUG00000015308) #24	ENSSPUG00000015301 #25	ENSSPUG00000015265 #25	RFK (ENSSPUG00000015243) #27	PCSK5 (ENSSPUG00000015217) #28	OSTF1 (ENSSPUG00000015197) #29	NMRK1 (ENSSPUG00000015186) #30	CARNMT1 (ENSSPUG00000015140) #31	TRPM6 (ENSSPUG00000014760) #34
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487.eb	ENSGT00940000157487.db	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000190269	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487.eb	ENSGT00940000157487.db	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970 #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000190269	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000016853	ENSPMRG00000016858	ENSPMRG00000016869	RASEF (ENSPMRG00000016876) #7	TLE1 (ENSPMRG00000016889) #11	ENSPMRG00000016913	TLE4 (ENSPMRG00000016921) #14	ENSPMRG00000016938	ENSPMRG00000016946	ENSPMRG00000016950	PSAT1 (ENSPMRG00000016957) #15	CEP78 (ENSPMRG00000016965) #16	ENSPMRG00000016976	ENSPMRG00000009861	ENSPMRG00000009954	GNA14 (ENSPMRG00000010242) #22	VPS13A (ENSPMRG00000010569) #23	ENSPMRG00000011850	FOXB2 (ENSPMRG00000011853) #24	ENSPMRG00000011855 #25	ENSPMRG00000011866 #25	GCNT1 (ENSPMRG00000011872) #26	RFK (ENSPMRG00000011873) #27	PCSK5 (ENSPMRG00000011949) #28	ENSPMRG00000012583	OSTF1 (ENSPMRG00000012586) #29	NMRK1 (ENSPMRG00000012589) #30	CARNMT1 (ENSPMRG00000012594) #31	ENSPMRG00000012598	TRPM6 (ENSPMRG00000012803) #34	RORB (ENSPMRG00000014404) #35
Argentine black and white tegu	MODERN SPECIES	25	C9orf64 (ENSSMRG00000019175)	KIF27 (ENSSMRG00000019173)	GKAP1 (ENSSMRG00000019172)	UBQLN1 (ENSSMRG00000019171)	IDNK (ENSSMRG00000019170)	ENSSMRG00000019169	FRMD3 (ENSSMRG00000019168)	ENSSMRG00000019167	RASEF (ENSSMRG00000019166) #7	TLE1 (ENSSMRG00000019001) #11	ENSSMRG00000018997	TLE4 (ENSSMRG00000018996) #14	PSAT1 (ENSSMRG00000018994) #15	CEP78 (ENSSMRG00000018993) #16	ENSSMRG00000018991	GNA14 (ENSSMRG00000018990) #22	VPS13A (ENSSMRG00000018987) #23	FOXB2 (ENSSMRG00000018986) #24	ENSSMRG00000018985 #25	ENSSMRG00000018983 #25	GCNT1 (ENSSMRG00000018982) #26	RFK (ENSSMRG00000018980) #27	ENSSMRG00000018979 #28	PCSK5 (ENSSMRG00000018978) #28	OSTF1 (ENSSMRG00000018977) #29	NMRK1 (ENSSMRG00000018976) #30	CARNMT1 (ENSSMRG00000018975) #31	ENSSMRG00000018974	TRPM6 (ENSSMRG00000018973) #34	RORB (ENSSMRG00000018972) #35	ENSSMRG00000018962 #36
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487.eb	ENSGT00940000157487.db	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970.ab #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000190269	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487.eb	ENSGT00940000157487.db	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b.l.a #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.t #23	ENSGT00940000161970.`b #24	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00960000190269	ENSGT00940000158164 #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487.eb	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00390000009358	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b.l.a #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.t #23	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164.c #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609	ENSGT01050000244942.b.a.a	ENSGT00940000156165
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00940000161055	ENSGT00940000153434.b	ENSGT00390000002374	ENSGT00940000157487.eb	ENSGT00390000008742	ENSGT00940000156437.i	ENSGT00390000003364	ENSGT00940000158577	ENSGT00390000009358	ENSGT00940000159488 #7	ENSGT01030000234519.e.a.a.a.a.a #11	ENSGT01030000234519.e.a.a.a.a.b.l.a #14	ENSGT00940000153241.A #15	ENSGT00390000013287 #16	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.t #23	ENSGT00940000154422 #25	ENSGT00940000161348 #26	ENSGT00390000015537 #27	ENSGT00940000155770 #28	ENSGT00920000149159 #29	ENSGT00940000159384 #30	ENSGT00390000005323 #31	ENSGT00940000158164.c #34	ENSGT00940000157708 #35	ENSGT00940000155221 #36	ENSGT00950000183037.A.b #37	ENSGT00940000154609	ENSGT01050000244942.b.a.a	ENSGT00940000156165
Mainland tiger snake	MODERN SPECIES	1	HNRNPK (ENSNSUG00000014458)	C9orf64 (ENSNSUG00000014459)	ENSNSUG00000014460	ENSNSUG00000014461	GKAP1 (ENSNSUG00000014462)	UBQLN1 (ENSNSUG00000014464)	IDNK (ENSNSUG00000014976)	FRMD3 (ENSNSUG00000014978)	ENSNSUG00000014980	TLE1 (ENSNSUG00000014982) #11	TLE4 (ENSNSUG00000014992) #14	PSAT1 (ENSNSUG00000017692) #15	CEP78 (ENSNSUG00000017693) #16	ENSNSUG00000017694	ENSNSUG00000017695	GNA14 (ENSNSUG00000017696) #22	VPS13A (ENSNSUG00000017697) #23	ENSNSUG00000017700 #25	ENSNSUG00000017711 #25	GCNT1 (ENSNSUG00000017727) #26	PCSK5 (ENSNSUG00000017728) #28	OSTF1 (ENSNSUG00000017729) #29	NMRK1 (ENSNSUG00000017730) #30	CARNMT1 (ENSNSUG00000017731) #31	ENSNSUG00000017732	ENSNSUG00000017733 #34	ENSNSUG00000017734 #34	RORB (ENSNSUG00000017735) #35	ANXA1 (ENSNSUG00000017744) #36	ENSNSUG00000017745	ENSNSUG00000017746 #37
Eastern brown snake	MODERN SPECIES	23	HNRNPK (ENSPTXG00000011080)	C9orf64 (ENSPTXG00000011079)	ENSPTXG00000011078	ENSPTXG00000011076	GKAP1 (ENSPTXG00000011073)	UBQLN1 (ENSPTXG00000011070)	IDNK (ENSPTXG00000011068)	FRMD3 (ENSPTXG00000011050)	ENSPTXG00000011048	RASEF (ENSPTXG00000011044) #7	TLE1 (ENSPTXG00000011035) #11	TLE4 (ENSPTXG00000011028) #14	PSAT1 (ENSPTXG00000011024) #15	CEP78 (ENSPTXG00000011019) #16	ENSPTXG00000011016	GNA14 (ENSPTXG00000011015) #22	VPS13A (ENSPTXG00000005943) #23	ENSPTXG00000005941 #25	ENSPTXG00000005940 #25	GCNT1 (ENSPTXG00000005939) #26	RFK (ENSPTXG00000005938) #27	PCSK5 (ENSPTXG00000005937) #28	OSTF1 (ENSPTXG00000005936) #29	NMRK1 (ENSPTXG00000005935) #30	CARNMT1 (ENSPTXG00000005934) #31	TRPM6 (ENSPTXG00000005920) #34	RORB (ENSPTXG00000005917) #35	ANXA1 (ENSPTXG00000005230) #36	ENSPTXG00000005171 #37	ALDH1A1 (ENSPTXG00000005166)	ENSPTXG00000005164
Blue-lipped sea krait	MODERN SPECIES	3065																GNA14 (ENSLLTG00000015410) #22
Indian cobra	MODERN SPECIES	1	ENSNNAG00000016807	ENSNNAG00000016804	ENSNNAG00000016791	ENSNNAG00000016758	GKAP1 (ENSNNAG00000016726)	UBQLN1 (ENSNNAG00000016716)	IDNK (ENSNNAG00000016714)	FRMD3 (ENSNNAG00000016655)	RASEF (ENSNNAG00000016547) #7	TLE1 (ENSNNAG00000016494) #11	ENSNNAG00000016142 #14	PSAT1 (ENSNNAG00000016080) #15	ENSNNAG00000016066 #16	ENSNNAG00000016060 #16	ENSNNAG00000016049	GNA14 (ENSNNAG00000016037) #22	VPS13A (ENSNNAG00000011477) #23	FOXB2 (ENSNNAG00000011034) #24	ENSNNAG00000011008 #25	ENSNNAG00000010952 #25	GCNT1 (ENSNNAG00000010933) #26	RFK (ENSNNAG00000010914) #27	PCSK5 (ENSNNAG00000008993) #28	OSTF1 (ENSNNAG00000008798) #29	NMRK1 (ENSNNAG00000008740) #30	CARNMT1 (ENSNNAG00000008718) #31	TRPM6 (ENSNNAG00000008269) #34	RORB (ENSNNAG00000008087) #35	ANXA1 (ENSNNAG00000007974) #36	ENSNNAG00000007480 #37	ALDH1A1 (ENSNNAG00000007407)
Lizard	MODERN SPECIES	1	KIF27 (ENSACAG00000001735)	ENSACAG00000040829	GKAP1 (ENSACAG00000001835)	ENSACAG00000042248	UBQLN1 (ENSACAG00000001880)	IDNK (ENSACAG00000002000)	FRMD3 (ENSACAG00000002032)	ENSACAG00000041514	RASEF (ENSACAG00000002155) #7	TLE1 (ENSACAG00000002262) #11	TLE4 (ENSACAG00000002789) #14	ENSACAG00000044927	ENSACAG00000025462	PSAT1 (ENSACAG00000006074) #15	ENSACAG00000005913	GNA14 (ENSACAG00000028039) #22	VPS13A (ENSACAG00000005655) #23	FOXB2 (ENSACAG00000023403) #24	ENSACAG00000034707 #25	PRUNE2 (ENSACAG00000005636) #25	GCNT1 (ENSACAG00000005572) #26	RFK (ENSACAG00000040387) #27	PCSK5 (ENSACAG00000005525) #28	ENSACAG00000041724	OSTF1 (ENSACAG00000005379) #29	NMRK1 (ENSACAG00000005328) #30	CARNMT1 (ENSACAG00000029442) #31	TRPM6 (ENSACAG00000005230) #34	RORB (ENSACAG00000005205) #35	ENSACAG00000038724	ANXA1 (ENSACAG00000011929) #36