Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000159063 #22
Gnathostomata	ANCESTRAL SPECIES	178											ENSGT00950000182787.B	ENSGT00390000003100	ENSGT00950000183064.a.b.b	ENSGT00390000013819	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00940000163251.b	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00410000025556.a.a.a.b #31
Euteleostomi	ANCESTRAL SPECIES		ENSGT00940000157056	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.b	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00940000163251.b	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Sarcopterygii	ANCESTRAL SPECIES	60	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.b	ENSGT00940000165411.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT01030000234566.f ##34
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.b	ENSGT00940000165411.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Amniota	ANCESTRAL SPECIES	2	ENSGT00940000157056	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Mammalia	ANCESTRAL SPECIES	1	ENSGT01100000263660	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Theria	ANCESTRAL SPECIES	6	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Primates	ANCESTRAL SPECIES	10	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851
Rhinopithecus	ANCESTRAL SPECIES	144	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.l	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000167225 #29	ENSGT00940000158376 #30	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34
Black snub-nosed monkey	MODERN SPECIES	1685																IRF2 (ENSRBIG00000039482) #22	ENPP6 (ENSRBIG00000025238) #23	STOX2 (ENSRBIG00000027490) #24	TRAPPC11 (ENSRBIG00000033668) #25	RWDD4 (ENSRBIG00000036803) #26	ENSRBIG00000005434 #27	ING2 (ENSRBIG00000010666) #28	ENSRBIG00000042448 #29	CDKN2AIP (ENSRBIG00000037956) #30	WWC2 (ENSRBIG00000040787) #31	DCTD (ENSRBIG00000044833) #32	TENM3 (ENSRBIG00000037111) #33	ENSRBIG00000039333 #34
Golden snub-nosed monkey	MODERN SPECIES	2045	PDLIM3 (ENSRROG00000029578)	CCDC110 (ENSRROG00000035983)	C4orf47 (ENSRROG00000032521)	UFSP2 (ENSRROG00000032232)	ANKRD37 (ENSRROG00000032992)	LRP2BP (ENSRROG00000042551)	SNX25 (ENSRROG00000034030)	CFAP97 (ENSRROG00000042997)	SLC25A4 (ENSRROG00000035238)	HELT (ENSRROG00000034207)	ACSL1 (ENSRROG00000041468)	CENPU (ENSRROG00000000140)	PRIMPOL (ENSRROG00000043287)	ENSRROG00000032729	ENSRROG00000044348	IRF2 (ENSRROG00000002645) #22	ENPP6 (ENSRROG00000022161) #23	STOX2 (ENSRROG00000035129) #24	TRAPPC11 (ENSRROG00000045269) #25	RWDD4 (ENSRROG00000035896) #26	ING2 (ENSRROG00000032306) #28	ENSRROG00000041611 #29	CDKN2AIP (ENSRROG00000029416) #30	CLDN22 (ENSRROG00000026507)	WWC2 (ENSRROG00000008042) #31
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Vervet Monkey	MODERN SPECIES	26	ENSCSAG00000002955	CCDC110 (ENSCSAG00000002958)	C4orf47 (ENSCSAG00000002963)	UFSP2 (ENSCSAG00000002968)	ANKRD37 (ENSCSAG00000002969)	LRP2BP (ENSCSAG00000002972)	SNX25 (ENSCSAG00000002975)	CFAP97 (ENSCSAG00000002977)	SLC25A4 (ENSCSAG00000002980)	HELT (ENSCSAG00000002982)	ENSCSAG00000002985	ACSL1 (ENSCSAG00000002990)	CENPU (ENSCSAG00000002994)	PRIMPOL (ENSCSAG00000002998)	CASP3 (ENSCSAG00000003002)	IRF2 (ENSCSAG00000003010) #22	ENPP6 (ENSCSAG00000003012) #23	STOX2 (ENSCSAG00000003014) #24	TRAPPC11 (ENSCSAG00000003019) #25	RWDD4 (ENSCSAG00000003024) #26	ING2 (ENSCSAG00000003025) #28	CDKN2AIP (ENSCSAG00000003030) #30	CLDN24 (ENSCSAG00000000094)	CLDN22 (ENSCSAG00000000096)	WWC2 (ENSCSAG00000003034) #31	DCTD (ENSCSAG00000003039) #32	TENM3 (ENSCSAG00000003045) #34	ENSCSAG00000003051	AGA (ENSCSAG00000003060)	NEIL3 (ENSCSAG00000003064)	ENSCSAG00000003067
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.n	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00950000183192.a.a.y.b.b	ENSGT00910000147875	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.m.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00950000183192.a.a.y.b.b	ENSGT00910000147875	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Pig-tailed macaque	MODERN SPECIES	375	PDLIM3 (ENSMNEG00000044890)	CCDC110 (ENSMNEG00000035803)	C4orf47 (ENSMNEG00000044226)	UFSP2 (ENSMNEG00000012364)	ANKRD37 (ENSMNEG00000037694)	LRP2BP (ENSMNEG00000027242)	SNX25 (ENSMNEG00000030572)	CFAP97 (ENSMNEG00000034867)	ENSMNEG00000022238	SLC25A4 (ENSMNEG00000034329)	HELT (ENSMNEG00000033885)	ACSL1 (ENSMNEG00000023458)	CENPU (ENSMNEG00000034713)	PRIMPOL (ENSMNEG00000032646)	ENSMNEG00000018721	IRF2 (ENSMNEG00000034903) #22	ENPP6 (ENSMNEG00000035672) #23	STOX2 (ENSMNEG00000044751) #24	TRAPPC11 (ENSMNEG00000043814) #25	RWDD4 (ENSMNEG00000029331) #26	ING2 (ENSMNEG00000045559) #28	ENSMNEG00000036223	ENSMNEG00000023135	CDKN2AIP (ENSMNEG00000032207) #30	CLDN22 (ENSMNEG00000042661)	WWC2 (ENSMNEG00000034065) #31	DCTD (ENSMNEG00000033220) #32	TENM3 (ENSMNEG00000030271) #34	AGA (ENSMNEG00000037318)	NEIL3 (ENSMNEG00000036177)	VEGFC (ENSMNEG00000045119)
Macaca_a	ANCESTRAL SPECIES	12	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00940000170471.I.a.a.a	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.n	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.b.b.b.a.a	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.b.a.b.a.a.a.a	ENSGT00950000183045.C	ENSGT00940000153230.A
Crab-eating macaque	MODERN SPECIES	15	C4orf47 (ENSMFAG00000003574)	ANKRD37 (ENSMFAG00000033324)	ENSMFAG00000055096	UFSP2 (ENSMFAG00000041642)	SNX25 (ENSMFAG00000037789)	CFAP97 (ENSMFAG00000007379)	ENSMFAG00000064346	SLC25A4 (ENSMFAG00000032688)	ENSMFAG00000050266	HELT (ENSMFAG00000039500)	ACSL1 (ENSMFAG00000033716)	ENSMFAG00000055773	CENPU (ENSMFAG00000043328)	PRIMPOL (ENSMFAG00000000469)	CASP3 (ENSMFAG00000036969)	IRF2 (ENSMFAG00000039751) #22	ENPP6 (ENSMFAG00000038701) #23	ENSMFAG00000058210	ENSMFAG00000049104	STOX2 (ENSMFAG00000044376) #24	ENSMFAG00000057408	TRAPPC11 (ENSMFAG00000039616) #25	ENSMFAG00000000543 #26	ENSMFAG00000052775	ING2 (ENSMFAG00000032816) #28	CDKN2AIP (ENSMFAG00000046173) #30	ENSMFAG00000064058	CLDN24 (ENSMFAG00000008066)	CLDN22 (ENSMFAG00000012673)	WWC2 (ENSMFAG00000033741) #31	DCTD (ENSMFAG00000034653) #32
Rhesus	MODERN SPECIES	15	UFSP2 (ENSMMUG00000003520)	ANKRD37 (ENSMMUG00000062744)	ENSMMUG00000062057	LRP2BP (ENSMMUG00000003519)	SNX25 (ENSMMUG00000003518)	CFAP97 (ENSMMUG00000015473)	SLC25A4 (ENSMMUG00000015472)	ENSMMUG00000061064	HELT (ENSMMUG00000001081)	ENSMMUG00000054060	ENSMMUG00000050213	ACSL1 (ENSMMUG00000012177)	CENPU (ENSMMUG00000012176)	PRIMPOL (ENSMMUG00000012175)	CASP3 (ENSMMUG00000012053)	IRF2 (ENSMMUG00000015087) #22	ENPP6 (ENSMMUG00000016747) #23	STOX2 (ENSMMUG00000004898) #24	ENSMMUG00000049655	ENSMMUG00000053358	TRAPPC11 (ENSMMUG00000023651) #25	RWDD4 (ENSMMUG00000023650) #26	ING2 (ENSMMUG00000008881) #28	CDKN2AIP (ENSMMUG00000002004) #30	ENSMMUG00000049670	ENSMMUG00000055157	CLDN24 (ENSMMUG00000030008)	CLDN22 (ENSMMUG00000015745)	WWC2 (ENSMMUG00000015748) #31	DCTD (ENSMMUG00000000284) #32	TENM3 (ENSMMUG00000007240) #34
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.n	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00950000183192.a.a.y.b.b	ENSGT00910000147875	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Olive baboon	MODERN SPECIES	13	ENSPANG00000044926	PDLIM3 (ENSPANG00000018685)	CCDC110 (ENSPANG00000031109)	C4orf47 (ENSPANG00000000980)	UFSP2 (ENSPANG00000009592)	ANKRD37 (ENSPANG00000021942)	LRP2BP (ENSPANG00000008049)	SNX25 (ENSPANG00000006290)	CFAP97 (ENSPANG00000021866)	SLC25A4 (ENSPANG00000022114)	HELT (ENSPANG00000008749)	ACSL1 (ENSPANG00000013760)	CENPU (ENSPANG00000020226)	PRIMPOL (ENSPANG00000007055)	CASP3 (ENSPANG00000023340)	IRF2 (ENSPANG00000013763) #22	ENPP6 (ENSPANG00000009066) #23	STOX2 (ENSPANG00000001074) #24	ENSPANG00000049838	TRAPPC11 (ENSPANG00000014290) #25	RWDD4 (ENSPANG00000015801) #26	ING2 (ENSPANG00000009492) #28	ENSPANG00000049160	CDKN2AIP (ENSPANG00000024476) #30	ENSPANG00000048078	ENSPANG00000040919	CLDN24 (ENSPANG00000004497)	CLDN22 (ENSPANG00000006467)	ENSPANG00000050861 #31	ENSPANG00000040899 #31	DCTD (ENSPANG00000018020) #32
Cercopithecinae_d	ANCESTRAL SPECIES	21	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.n	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00950000183192.a.a.y.b.b	ENSGT00910000147875	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Drill	MODERN SPECIES	1335	PDLIM3 (ENSMLEG00000032166)	CCDC110 (ENSMLEG00000031348)	C4orf47 (ENSMLEG00000039083)	UFSP2 (ENSMLEG00000044359)	ANKRD37 (ENSMLEG00000032785)	LRP2BP (ENSMLEG00000038048)	SNX25 (ENSMLEG00000035243)	CFAP97 (ENSMLEG00000031537)	ENSMLEG00000021195	SLC25A4 (ENSMLEG00000015212)	HELT (ENSMLEG00000039682)	ACSL1 (ENSMLEG00000041282)	CENPU (ENSMLEG00000043104)	PRIMPOL (ENSMLEG00000044062)	CASP3 (ENSMLEG00000028788)	IRF2 (ENSMLEG00000033644) #22	ENPP6 (ENSMLEG00000028275) #23	STOX2 (ENSMLEG00000038095) #24	TRAPPC11 (ENSMLEG00000038322) #25	RWDD4 (ENSMLEG00000031916) #26	ING2 (ENSMLEG00000003125) #28	ENSMLEG00000028024	ENSMLEG00000031893	CDKN2AIP (ENSMLEG00000034996) #30	CLDN24 (ENSMLEG00000027914)	CLDN22 (ENSMLEG00000027406)	WWC2 (ENSMLEG00000038028) #31	DCTD (ENSMLEG00000037100) #32	TENM3 (ENSMLEG00000033352) #34
Sooty mangabey	MODERN SPECIES	272												ACSL1 (ENSCATG00000028002)	CENPU (ENSCATG00000042276)	PRIMPOL (ENSCATG00000038976)	ENSCATG00000029430	ENSCATG00000037804 #22	ENPP6 (ENSCATG00000037936) #23	STOX2 (ENSCATG00000014156) #24	TRAPPC11 (ENSCATG00000004022) #25	RWDD4 (ENSCATG00000034736) #26	ING2 (ENSCATG00000038558) #28	ENSCATG00000030466	ENSCATG00000039580	CDKN2AIP (ENSCATG00000018192) #30	CLDN24 (ENSCATG00000005875)	WWC2 (ENSCATG00000036789) #31	CLDN22 (ENSCATG00000020839)	DCTD (ENSCATG00000035278) #32	TENM3 (ENSCATG00000040062) #34	ENSCATG00000024803 #34	AGA (ENSCATG00000038636)
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194.c #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00910000147597	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194.c #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194.c #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00390000010285.c.ac	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Gorilla	MODERN SPECIES	17	CCDC110 (ENSGGOG00000027638)	C4orf47 (ENSGGOG00000027706)	UFSP2 (ENSGGOG00000004851)	ANKRD37 (ENSGGOG00000004850)	LRP2BP (ENSGGOG00000002817)	SNX25 (ENSGGOG00000017161)	CFAP97 (ENSGGOG00000007515)	SLC25A4 (ENSGGOG00000010437)	ENSGGOG00000001324	ENSGGOG00000041709	ACSL1 (ENSGGOG00000009966)	CENPU (ENSGGOG00000011892)	ENSGGOG00000011879	CASP3 (ENSGGOG00000025155)	ENSGGOG00000036205	IRF2 (ENSGGOG00000016559) #22	STOX2 (ENSGGOG00000013917) #24	ENSGGOG00000036530 #25	RWDD4 (ENSGGOG00000011982) #26	ING2 (ENSGGOG00000041782) #28	CDKN2AIP (ENSGGOG00000022072) #30	CLDN24 (ENSGGOG00000043794)	CLDN22 (ENSGGOG00000043233)	WWC2 (ENSGGOG00000009849) #31	ENSGGOG00000038808	DCTD (ENSGGOG00000016412) #32	TENM3 (ENSGGOG00000011344) #34	AGA (ENSGGOG00000007600)	NEIL3 (ENSGGOG00000016799)	ENSGGOG00000040176	SPCS3 (ENSGGOG00000023323)
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194.c #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00390000010285.c.ac	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Human	MODERN SPECIES	16	SORBS2 (ENSG00000154556)	PDLIM3 (ENSG00000154553)	CCDC110 (ENSG00000168491)	C4orf47 (ENSG00000205129)	UFSP2 (ENSG00000109775)	ANKRD37 (ENSG00000186352)	LRP2BP (ENSG00000109771)	SNX25 (ENSG00000109762)	CFAP97 (ENSG00000164323)	SLC25A4 (ENSG00000151729)	HELT (ENSG00000187821)	ACSL1 (ENSG00000151726)	CENPU (ENSG00000151725)	PRIMPOL (ENSG00000164306)	CASP3 (ENSG00000164305)	IRF2 (ENSG00000168310) #22	ENPP6 (ENSG00000164303) #23	STOX2 (ENSG00000173320) #24	TRAPPC11 (ENSG00000168538) #25	RWDD4 (ENSG00000182552) #26	ING2 (ENSG00000168556) #28	CDKN2AIP (ENSG00000168564) #30	CLDN24 (ENSG00000185758)	CLDN22 (ENSG00000177300)	WWC2 (ENSG00000151718) #31	DCTD (ENSG00000129187) #32	TENM3 (ENSG00000218336) #34	AGA (ENSG00000038002)	NEIL3 (ENSG00000109674)	VEGFC (ENSG00000150630)	SPCS3 (ENSG00000129128)
Pan	ANCESTRAL SPECIES	7	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00730000111223.j	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194.c #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00950000186328	ENSGT00410000025556.a.a.a.b #31	ENSGT00390000010285.c.ac	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Chimpanzee	MODERN SPECIES	17	CCDC110 (ENSPTRG00000016653)	C4H4orf47 (ENSPTRG00000031058)	UFSP2 (ENSPTRG00000016652)	ANKRD37 (ENSPTRG00000016651)	LRP2BP (ENSPTRG00000016650)	SNX25 (ENSPTRG00000016649)	CFAP97 (ENSPTRG00000016647)	SLC25A4 (ENSPTRG00000016646)	ENSPTRG00000044593	ENSPTRG00000047913	ACSL1 (ENSPTRG00000016644)	CENPU (ENSPTRG00000016643)	PRIMPOL (ENSPTRG00000016642)	CASP3 (ENSPTRG00000016640)	ENSPTRG00000049340	IRF2 (ENSPTRG00000050798) #22	ENPP6 (ENSPTRG00000016636) #23	STOX2 (ENSPTRG00000016634) #24	TRAPPC11 (ENSPTRG00000016633) #25	RWDD4 (ENSPTRG00000016632) #26	ING2 (ENSPTRG00000016631) #28	CDKN2AIP (ENSPTRG00000016629) #30	CLDN24 (ENSPTRG00000016628)	CLDN22 (ENSPTRG00000016627)	ENSPTRG00000044853	WWC2 (ENSPTRG00000016626) #31	ENSPTRG00000050006	DCTD (ENSPTRG00000016624) #32	TENM3 (ENSPTRG00000016622) #34	AGA (ENSPTRG00000016618)	NEIL3 (ENSPTRG00000016617)
Bonobo	MODERN SPECIES	17	PDLIM3 (ENSPPAG00000033898)	CCDC110 (ENSPPAG00000041900)	C4orf47 (ENSPPAG00000022550)	UFSP2 (ENSPPAG00000040151)	ANKRD37 (ENSPPAG00000034201)	LRP2BP (ENSPPAG00000042897)	SNX25 (ENSPPAG00000031176)	CFAP97 (ENSPPAG00000029614)	SLC25A4 (ENSPPAG00000037709)	ENSPPAG00000040586	ENSPPAG00000043956	ACSL1 (ENSPPAG00000035756)	CENPU (ENSPPAG00000041105)	ENSPPAG00000038308	CASP3 (ENSPPAG00000029792)	IRF2 (ENSPPAG00000034580) #22	ENPP6 (ENSPPAG00000034444) #23	STOX2 (ENSPPAG00000019640) #24	TRAPPC11 (ENSPPAG00000028586) #25	RWDD4 (ENSPPAG00000041963) #26	ING2 (ENSPPAG00000042163) #28	CDKN2AIP (ENSPPAG00000040121) #30	CLDN24 (ENSPPAG00000034097)	ENSPPAG00000021015	WWC2 (ENSPPAG00000040062) #31	ENSPPAG00000037373	DCTD (ENSPPAG00000022425) #32	TENM3 (ENSPPAG00000038117) #34	AGA (ENSPPAG00000036906)	NEIL3 (ENSPPAG00000035318)	VEGFC (ENSPPAG00000043349)
Orangutan	MODERN SPECIES	17	PDLIM3 (ENSPPYG00000015251)	CCDC110 (ENSPPYG00000015249)	C4orf47 (ENSPPYG00000015248)	UFSP2 (ENSPPYG00000015247)	ANKRD37 (ENSPPYG00000015246)	LRP2BP (ENSPPYG00000015245)	SNX25 (ENSPPYG00000015244)	CFAP97 (ENSPPYG00000015243)	ENSPPYG00000015242	SLC25A4 (ENSPPYG00000037131)	ENSPPYG00000015241	ACSL1 (ENSPPYG00000015239)	CENPU (ENSPPYG00000015238)	PRIMPOL (ENSPPYG00000015237)	CASP3 (ENSPPYG00000037417)	IRF2 (ENSPPYG00000036054) #22	ENSPPYG00000033949	ENPP6 (ENSPPYG00000015233) #23	STOX2 (ENSPPYG00000015232) #24	TRAPPC11 (ENSPPYG00000015231) #25	RWDD4 (ENSPPYG00000015230) #26	ING2 (ENSPPYG00000015229) #28	CDKN2AIP (ENSPPYG00000015228) #30	CLDN24 (ENSPPYG00000015226)	CLDN22 (ENSPPYG00000015225)	WWC2 (ENSPPYG00000015224) #31	ENSPPYG00000015223 #32	TENM3 (ENSPPYG00000029729) #34	AGA (ENSPPYG00000015220)	NEIL3 (ENSPPYG00000040336)	VEGFC (ENSPPYG00000015219)
Gibbon	MODERN SPECIES	22	C4orf47 (ENSNLEG00000011221)	UFSP2 (ENSNLEG00000031231)	ANKRD37 (ENSNLEG00000033516)	LRP2BP (ENSNLEG00000011151)	ENSNLEG00000011147	CFAP97 (ENSNLEG00000011148)	ENSNLEG00000033110	ENSNLEG00000011139	ENSNLEG00000011136	ENSNLEG00000028403	ACSL1 (ENSNLEG00000011041)	CENPU (ENSNLEG00000010967)	ENSNLEG00000010919	CASP3 (ENSNLEG00000010895)	ENSNLEG00000034282	IRF2 (ENSNLEG00000010848) #22	ENPP6 (ENSNLEG00000029143) #23	STOX2 (ENSNLEG00000010803) #24	TRAPPC11 (ENSNLEG00000010773) #25	RWDD4 (ENSNLEG00000034868) #26	ING2 (ENSNLEG00000035063) #28	ENSNLEG00000033474	CDKN2AIP (ENSNLEG00000010720) #30	CLDN24 (ENSNLEG00000018868)	CLDN22 (ENSNLEG00000018867)	WWC2 (ENSNLEG00000010629) #31	DCTD (ENSNLEG00000032116) #32	ENSNLEG00000033001	TENM3 (ENSNLEG00000010584) #34	AGA (ENSNLEG00000016825)	NEIL3 (ENSNLEG00000016818)
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.o.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223.hb
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.o.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.y	ENSGT00940000162234.z	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223.hb
Marmoset	MODERN SPECIES	15	LRP2BP (ENSCJAG00000005918)	ENSCJAG00000040592	SNX25 (ENSCJAG00000005873)	CFAP97 (ENSCJAG00000005867)	SLC25A4 (ENSCJAG00000076040)	ENSCJAG00000086461	HELT (ENSCJAG00000005863)	ENSCJAG00000086648	ENSCJAG00000084059	ACSL1 (ENSCJAG00000005780)	ENSCJAG00000022314	CENPU (ENSCJAG00000044593)	PRIMPOL (ENSCJAG00000005747)	CASP3 (ENSCJAG00000005740)	ENSCJAG00000082734	IRF2 (ENSCJAG00000042693) #22	ENPP6 (ENSCJAG00000005711) #23	ENSCJAG00000085011	STOX2 (ENSCJAG00000005690) #24	TRAPPC11 (ENSCJAG00000005616) #25	RWDD4 (ENSCJAG00000045540) #26	ENSCJAG00000063903	ING2 (ENSCJAG00000005602) #28	CDKN2AIP (ENSCJAG00000005591) #30	CLDN24 (ENSCJAG00000044314)	CLDN22 (ENSCJAG00000005586)	WWC2 (ENSCJAG00000005554) #31	ENSCJAG00000078649	DCTD (ENSCJAG00000005526) #32	ENSCJAG00000070774	TENM3 (ENSCJAG00000005501) #34
Cebidae_a	ANCESTRAL SPECIES	75	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00910000147189	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.o.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223.hb	ENSGT00940000159851	ENSGT00910000144159.B
Bolivian squirrel monkey	MODERN SPECIES	102	ENSSBOG00000028665	C4orf47 (ENSSBOG00000023609)	UFSP2 (ENSSBOG00000023622)	ENSSBOG00000023318	LRP2BP (ENSSBOG00000021810)	SNX25 (ENSSBOG00000017576)	CFAP97 (ENSSBOG00000026555)	SLC25A4 (ENSSBOG00000027664)	HELT (ENSSBOG00000021368)	ACSL1 (ENSSBOG00000028991)	ENSSBOG00000022081	CENPU (ENSSBOG00000028087)	PRIMPOL (ENSSBOG00000020714)	CASP3 (ENSSBOG00000022394)	ENSSBOG00000020561	IRF2 (ENSSBOG00000023860) #22	ENPP6 (ENSSBOG00000025699) #23	STOX2 (ENSSBOG00000022049) #24	TRAPPC11 (ENSSBOG00000001467) #25	RWDD4 (ENSSBOG00000019970) #26	ING2 (ENSSBOG00000028567) #28	CDKN2AIP (ENSSBOG00000017285) #30	WWC2 (ENSSBOG00000016007) #31	ENSSBOG00000024426	ENSSBOG00000026812	DCTD (ENSSBOG00000015125) #32	TENM3 (ENSSBOG00000033110) #34	AGA (ENSSBOG00000023573)	NEIL3 (ENSSBOG00000032601)	VEGFC (ENSSBOG00000033122)	SPCS3 (ENSSBOG00000019414)
Capuchin	MODERN SPECIES	365	CCDC110 (ENSCCAG00000036443)	C4orf47 (ENSCCAG00000026422)	ENSCCAG00000025140	UFSP2 (ENSCCAG00000005498)	LRP2BP (ENSCCAG00000036785)	SNX25 (ENSCCAG00000022976)	CFAP97 (ENSCCAG00000028043)	SLC25A4 (ENSCCAG00000034781)	HELT (ENSCCAG00000008784)	ENSCCAG00000025838	ACSL1 (ENSCCAG00000034757)	CENPU (ENSCCAG00000022339)	ENSCCAG00000025472	ENSCCAG00000032330	ENSCCAG00000021322	IRF2 (ENSCCAG00000027111) #22	ENPP6 (ENSCCAG00000018542) #23	STOX2 (ENSCCAG00000025743) #24
Mas night monkey	MODERN SPECIES	1220														ENSANAG00000028520	CASP3 (ENSANAG00000025074)	IRF2 (ENSANAG00000029650) #22	ENPP6 (ENSANAG00000032373) #23	STOX2 (ENSANAG00000028743) #24	TRAPPC11 (ENSANAG00000023094) #25	RWDD4 (ENSANAG00000028135) #26	ING2 (ENSANAG00000035100) #28	CDKN2AIP (ENSANAG00000024642) #30	ENSANAG00000031052	WWC2 (ENSANAG00000029107) #31	DCTD (ENSANAG00000026089) #32	TENM3 (ENSANAG00000029299) #34
Tarsier	MODERN SPECIES	3213																IRF2 (ENSTSYG00000029414) #22	BACH1 (ENSTSYG00000010694)	GRIK1 (ENSTSYG00000008945)
Strepsirrhini	ANCESTRAL SPECIES	43	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Lemuriformes	ANCESTRAL SPECIES	38	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34
Lemuriformes_a	ANCESTRAL SPECIES	96	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34
Greater bamboo lemur	MODERN SPECIES	934		PDLIM3 (ENSPSMG00000025035)	CCDC110 (ENSPSMG00000025010)	C4orf47 (ENSPSMG00000024999)	UFSP2 (ENSPSMG00000024995)	ANKRD37 (ENSPSMG00000024978)	LRP2BP (ENSPSMG00000024973)	SNX25 (ENSPSMG00000024965)	CFAP97 (ENSPSMG00000024934)	SLC25A4 (ENSPSMG00000024929)	HELT (ENSPSMG00000024925)	ACSL1 (ENSPSMG00000024862)	CENPU (ENSPSMG00000024713)	PRIMPOL (ENSPSMG00000024702)	CASP3 (ENSPSMG00000024671)	IRF2 (ENSPSMG00000024663) #22	ENPP6 (ENSPSMG00000024655) #23	STOX2 (ENSPSMG00000024652) #24	TRAPPC11 (ENSPSMG00000024637) #25	RWDD4 (ENSPSMG00000024594) #26	ING2 (ENSPSMG00000024574) #28	ENSPSMG00000024569	CDKN2AIP (ENSPSMG00000024567) #30	ENSPSMG00000024565	WWC2 (ENSPSMG00000024556) #31	DCTD (ENSPSMG00000024537) #32	ENSPSMG00000024534	TENM3 (ENSPSMG00000024532) #34
Coquerels sifaka	MODERN SPECIES	293	SORBS2 (ENSPCOG00000021731)	PDLIM3 (ENSPCOG00000022786)	ENSPCOG00000020811	C4orf47 (ENSPCOG00000018395)	UFSP2 (ENSPCOG00000020721)	ANKRD37 (ENSPCOG00000028288)	LRP2BP (ENSPCOG00000025080)	SNX25 (ENSPCOG00000023167)	CFAP97 (ENSPCOG00000003005)	SLC25A4 (ENSPCOG00000027766)	ENSPCOG00000012638	HELT (ENSPCOG00000020612)	ACSL1 (ENSPCOG00000018988)	CENPU (ENSPCOG00000026801)	CASP3 (ENSPCOG00000020734)	IRF2 (ENSPCOG00000015845) #22	ENPP6 (ENSPCOG00000020685) #23	STOX2 (ENSPCOG00000022143) #24
Mouse lemur	MODERN SPECIES	5	ENSMICG00000036061	ENSMICG00000010899	C4orf47 (ENSMICG00000030821)	ENSMICG00000010888	ANKRD37 (ENSMICG00000010885)	LRP2BP (ENSMICG00000010882)	SNX25 (ENSMICG00000010874)	CFAP97 (ENSMICG00000010870)	SLC25A4 (ENSMICG00000006136)	ENSMICG00000036935	HELT (ENSMICG00000013610)	ACSL1 (ENSMICG00000013092)	CENPU (ENSMICG00000013084)	PRIMPOL (ENSMICG00000004817)	ENSMICG00000004809	IRF2 (ENSMICG00000015506) #22	ENPP6 (ENSMICG00000015491) #23	STOX2 (ENSMICG00000015479) #24	TRAPPC11 (ENSMICG00000000688) #25	RWDD4 (ENSMICG00000000687) #26	ING2 (ENSMICG00000001324) #28	CDKN2AIP (ENSMICG00000047516) #30	WWC2 (ENSMICG00000014921) #31	ENSMICG00000035945 #34	ENSMICG00000035656 #34	ENSMICG00000035005	AGA (ENSMICG00000009153)	NEIL3 (ENSMICG00000009147)	VEGFC (ENSMICG00000031537)	SPCS3 (ENSMICG00000045665)	ASB5 (ENSMICG00000035551)
Bushbaby	MODERN SPECIES	176	SPCS3 (ENSOGAG00000003825)	VEGFC (ENSOGAG00000003828)	NEIL3 (ENSOGAG00000012624)	AGA (ENSOGAG00000015190)	ENSOGAG00000032766	ENSOGAG00000024359 #34	ENSOGAG00000005872 #34	DCTD (ENSOGAG00000000583) #32	WWC2 (ENSOGAG00000011913) #31	CDKN2AIP (ENSOGAG00000026622) #30	ING2 (ENSOGAG00000016707) #28	RWDD4 (ENSOGAG00000016709) #26	TRAPPC11 (ENSOGAG00000027550) #25	STOX2 (ENSOGAG00000004800) #24	ENPP6 (ENSOGAG00000004801) #23	IRF2 (ENSOGAG00000010966) #22	CASP3 (ENSOGAG00000005985)	ENSOGAG00000031064	PRIMPOL (ENSOGAG00000001687)	ACSL1 (ENSOGAG00000001689)	HELT (ENSOGAG00000015934)	ENSOGAG00000028514	SLC25A4 (ENSOGAG00000012904)	ENSOGAG00000030937	SNX25 (ENSOGAG00000013059)	LRP2BP (ENSOGAG00000013064)	UFSP2 (ENSOGAG00000014660)	C4orf47 (ENSOGAG00000014665)	CCDC110 (ENSOGAG00000029342)	PDLIM3 (ENSOGAG00000010946)	SORBS2 (ENSOGAG00000010949)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Glires	ANCESTRAL SPECIES	8	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Rodentia	ANCESTRAL SPECIES	21	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Myomorpha	ANCESTRAL SPECIES	29	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Muroidea	ANCESTRAL SPECIES	26	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Muroidea_A	ANCESTRAL SPECIES	26	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000162234	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Cricetidae	ANCESTRAL SPECIES	23	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Cricetinae	ANCESTRAL SPECIES	25	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Golden Hamster	MODERN SPECIES	624	ENSMAUG00000015003	ENSMAUG00000017107	Pdlim3 (ENSMAUG00000010651)	Ccdc110 (ENSMAUG00000019990)	1700029J07Rik (ENSMAUG00000021203)	ENSMAUG00000015958	Ankrd37 (ENSMAUG00000019083)	Lrp2bp (ENSMAUG00000008998)	Snx25 (ENSMAUG00000013432)	Cfap97 (ENSMAUG00000014869)	Slc25a4 (ENSMAUG00000018790)	Helt (ENSMAUG00000021096)	Acsl1 (ENSMAUG00000008881)	Cenpu (ENSMAUG00000006619)	Casp3 (ENSMAUG00000004837)	Irf2 (ENSMAUG00000009382) #22	Enpp6 (ENSMAUG00000007201) #23	Stox2 (ENSMAUG00000019263) #24	Trappc11 (ENSMAUG00000009056) #25	Rwdd4a (ENSMAUG00000001169) #26	Ing2 (ENSMAUG00000012553) #28	ENSMAUG00000019930	Cldn24 (ENSMAUG00000022185)	Cldn22 (ENSMAUG00000009702)	ENSMAUG00000019841 #31	ENSMAUG00000020907 #31	ENSMAUG00000018016	Dctd (ENSMAUG00000015286) #32	ENSMAUG00000019767 #34	ENSMAUG00000010963	ENSMAUG00000018923
Chinese hamster chok1gshd	MODERN SPECIES	1	Pdlim3 (ENSCGRG00001008240)	Ccdc110 (ENSCGRG00001005516)	1700029J07Rik (ENSCGRG00001013769)	Ufsp2 (ENSCGRG00001016637)	Ankrd37 (ENSCGRG00001015273)	Lrp2bp (ENSCGRG00001005458)	Snx25 (ENSCGRG00001013747)	Cfap97 (ENSCGRG00001012133)	Slc25a4 (ENSCGRG00001007127)	ENSCGRG00001003795	Helt (ENSCGRG00001013119)	Acsl1 (ENSCGRG00001012242)	Cenpu (ENSCGRG00001024299)	Primpol (ENSCGRG00001016107)	CASP 3 (ENSCGRG00001015469)	Irf2 (ENSCGRG00001014578) #22	ENSCGRG00001014136	Enpp6 (ENSCGRG00001013812) #23	Stox2 (ENSCGRG00001013096) #24	ENSCGRG00001003901	Trappc11 (ENSCGRG00001018304) #25	Rwdd4a (ENSCGRG00001018945) #26	Ing2 (ENSCGRG00001017801) #28	Cdkn2aip (ENSCGRG00001016194) #30	ENSCGRG00001015210	Wwc2 (ENSCGRG00001016882) #31	Dctd (ENSCGRG00001016053) #32	Tenm3 (ENSCGRG00001021107) #34	Aga (ENSCGRG00001019108)	Neil3 (ENSCGRG00001018596)	Vegfc (ENSCGRG00001014310)
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Prairie vole	MODERN SPECIES	356	Sorbs2 (ENSMOCG00000009673)	Pdlim3 (ENSMOCG00000020686)	Ccdc110 (ENSMOCG00000021015)	1700029J07Rik (ENSMOCG00000005526)	Ufsp2 (ENSMOCG00000010420)	Ankrd37 (ENSMOCG00000011842)	Lrp2bp (ENSMOCG00000014647)	Snx25 (ENSMOCG00000012866)	Cfap97 (ENSMOCG00000005943)	ENSMOCG00000009524	Helt (ENSMOCG00000012330)	Acsl1 (ENSMOCG00000008489)	Cenpu (ENSMOCG00000004846)	Primpol (ENSMOCG00000006815)	Casp3 (ENSMOCG00000011756)	Irf2 (ENSMOCG00000013068) #22	Enpp6 (ENSMOCG00000021517) #23	Stox2 (ENSMOCG00000006233) #24	Trappc11 (ENSMOCG00000015798) #25	Rwdd4a (ENSMOCG00000002163) #26	ENSMOCG00000004967	Ing2 (ENSMOCG00000005078) #28	Cdkn2aip (ENSMOCG00000016713) #30	ENSMOCG00000008252	Cldn22 (ENSMOCG00000006954)	ENSMOCG00000003820 #31	ENSMOCG00000005387 #31	Dctd (ENSMOCG00000015038) #32	Tenm3 (ENSMOCG00000020342) #34	Aga (ENSMOCG00000014844)	ENSMOCG00000018728
Northern American deer mouse	MODERN SPECIES	8	Sorbs2 (ENSPEMG00000011899)	Pdlim3 (ENSPEMG00000017662)	Ccdc110 (ENSPEMG00000018897)	1700029J07Rik (ENSPEMG00000014792)	Ufsp2 (ENSPEMG00000016691)	Ankrd37 (ENSPEMG00000000522)	Lrp2bp (ENSPEMG00000006671)	Snx25 (ENSPEMG00000010066)	Cfap97 (ENSPEMG00000012341)	Slc25a4 (ENSPEMG00000026461)	Helt (ENSPEMG00000004914)	Acsl1 (ENSPEMG00000013337)	Cenpu (ENSPEMG00000008812)	Primpol (ENSPEMG00000014411)	Casp3 (ENSPEMG00000027833)	Irf2 (ENSPEMG00000018720) #22	Enpp6 (ENSPEMG00000001747) #23	ENSPEMG00000025263	Stox2 (ENSPEMG00000006925) #24	ENSPEMG00000009669	Trappc11 (ENSPEMG00000011449) #25	Rwdd4a (ENSPEMG00000015398) #26	ENSPEMG00000025926	Ing2 (ENSPEMG00000000125) #28	Cdkn2aip (ENSPEMG00000026992) #30	Wwc2 (ENSPEMG00000029499) #31	Dctd (ENSPEMG00000011762) #32	Tenm3 (ENSPEMG00000017497) #34	ENSPEMG00000029482	ENSPEMG00000027794	Aga (ENSPEMG00000025796)
Murinae	ANCESTRAL SPECIES	23	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Mus	ANCESTRAL SPECIES	6	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00900000143444	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00900000143444	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Mouse	MODERN SPECIES	17	Sorbs2 (ENSMUSG00000031626)	Pdlim3 (ENSMUSG00000031636)	Ccdc110 (ENSMUSG00000071104)	1700029J07Rik (ENSMUSG00000071103)	Ufsp2 (ENSMUSG00000031634)	Ankrd37 (ENSMUSG00000050914)	Lrp2bp (ENSMUSG00000031637)	Snx25 (ENSMUSG00000038291)	Cfap97 (ENSMUSG00000031631)	Slc25a4 (ENSMUSG00000031633)	Helt (ENSMUSG00000047171)	Acsl1 (ENSMUSG00000018796)	Cenpu (ENSMUSG00000031629)	Primpol (ENSMUSG00000038225)	Casp3 (ENSMUSG00000031628)	Irf2 (ENSMUSG00000031627) #22	Enpp6 (ENSMUSG00000038173) #23	Stox2 (ENSMUSG00000038143) #24	Trappc11 (ENSMUSG00000038102) #25	Rwdd4a (ENSMUSG00000031568) #26	Ing2 (ENSMUSG00000063049) #28	Cdkn2aip (ENSMUSG00000038069) #30	Cldn24 (ENSMUSG00000061974)	Wwc2 (ENSMUSG00000031563) #31	Cldn22 (ENSMUSG00000038064)	Dctd (ENSMUSG00000031562) #32	Tenm3 (ENSMUSG00000031561) #34	Aga (ENSMUSG00000031521)	Neil3 (ENSMUSG00000039396)	Vegfc (ENSMUSG00000031520)	Spcs3 (ENSMUSG00000054408)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.h	ENSGT00940000161922.i.b.g	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00900000143444	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
spretus	MODERN SPECIES	17	Sorbs2 (MGP_SPRETEiJ_G0032135)	MGP_SPRETEiJ_G0032136	Ccdc110 (MGP_SPRETEiJ_G0032137)	1700029J07Rik (MGP_SPRETEiJ_G0032138)	Ufsp2 (MGP_SPRETEiJ_G0032139)	Ankrd37 (MGP_SPRETEiJ_G0032140)	Lrp2bp (MGP_SPRETEiJ_G0032141)	Snx25 (MGP_SPRETEiJ_G0032142)	Cfap97 (MGP_SPRETEiJ_G0032143)	Slc25a4 (MGP_SPRETEiJ_G0032144)	Helt (MGP_SPRETEiJ_G0032145)	Acsl1 (MGP_SPRETEiJ_G0032146)	Cenpu (MGP_SPRETEiJ_G0032147)	Primpol (MGP_SPRETEiJ_G0032148)	Casp3 (MGP_SPRETEiJ_G0032149)	Irf2 (MGP_SPRETEiJ_G0032150) #22	Enpp6 (MGP_SPRETEiJ_G0032151) #23	Stox2 (MGP_SPRETEiJ_G0032152) #24	MGP_SPRETEiJ_G0032153	Trappc11 (MGP_SPRETEiJ_G0032154) #25	Rwdd4a (MGP_SPRETEiJ_G0032155) #26	Ing2 (MGP_SPRETEiJ_G0032156) #28	MGP_SPRETEiJ_G0032157	Cdkn2aip (MGP_SPRETEiJ_G0032158) #30	MGP_SPRETEiJ_G0032159	MGP_SPRETEiJ_G0032160	Cldn22 (MGP_SPRETEiJ_G0032161)	Wwc2 (MGP_SPRETEiJ_G0032162) #31	Dctd (MGP_SPRETEiJ_G0032163) #32	Tenm3 (MGP_SPRETEiJ_G0032164) #34	MGP_SPRETEiJ_G0032165
Steppe mouse	MODERN SPECIES	2485												Acsl1 (ENSMSIG00000027622)	Cenpu (ENSMSIG00000027669)	Primpol (ENSMSIG00000027692)	Casp3 (ENSMSIG00000027726)	Irf2 (ENSMSIG00000027760) #22	ENSMSIG00000027782
Ryukyu mouse	MODERN SPECIES	17	Sorbs2 (MGP_CAROLIEiJ_G0031021)	MGP_CAROLIEiJ_G0031022	Ccdc110 (MGP_CAROLIEiJ_G0031023)	1700029J07Rik (MGP_CAROLIEiJ_G0031024)	Ufsp2 (MGP_CAROLIEiJ_G0031025)	Ankrd37 (MGP_CAROLIEiJ_G0031026)	Lrp2bp (MGP_CAROLIEiJ_G0031027)	Snx25 (MGP_CAROLIEiJ_G0031028)	Cfap97 (MGP_CAROLIEiJ_G0031029)	Slc25a4 (MGP_CAROLIEiJ_G0031030)	Helt (MGP_CAROLIEiJ_G0031031)	Acsl1 (MGP_CAROLIEiJ_G0031032)	Cenpu (MGP_CAROLIEiJ_G0031033)	MGP_CAROLIEiJ_G0031034	Casp3 (MGP_CAROLIEiJ_G0031035)	Irf2 (MGP_CAROLIEiJ_G0031036) #22	Enpp6 (MGP_CAROLIEiJ_G0031037) #23	Stox2 (MGP_CAROLIEiJ_G0031038) #24	MGP_CAROLIEiJ_G0031039	Trappc11 (MGP_CAROLIEiJ_G0031040) #25	Rwdd4a (MGP_CAROLIEiJ_G0031041) #26	Ing2 (MGP_CAROLIEiJ_G0031042) #28	MGP_CAROLIEiJ_G0031043	Cdkn2aip (MGP_CAROLIEiJ_G0031044) #30	MGP_CAROLIEiJ_G0031045	MGP_CAROLIEiJ_G0031046	Wwc2 (MGP_CAROLIEiJ_G0031047) #31	Dctd (MGP_CAROLIEiJ_G0031048) #32	Tenm3 (MGP_CAROLIEiJ_G0031049) #34	MGP_CAROLIEiJ_G0031050	Aga (MGP_CAROLIEiJ_G0031051)
Shrew mouse	MODERN SPECIES	10	MGP_PahariEiJ_G0021489	MGP_PahariEiJ_G0021490	Ccdc110 (MGP_PahariEiJ_G0021491)	1700029J07Rik (MGP_PahariEiJ_G0021492)	Ufsp2 (MGP_PahariEiJ_G0021493)	Ankrd37 (MGP_PahariEiJ_G0021494)	Lrp2bp (MGP_PahariEiJ_G0021495)	Snx25 (MGP_PahariEiJ_G0021496)	Cfap97 (MGP_PahariEiJ_G0021497)	Slc25a4 (MGP_PahariEiJ_G0021498)	Helt (MGP_PahariEiJ_G0021499)	Acsl1 (MGP_PahariEiJ_G0021500)	Cenpu (MGP_PahariEiJ_G0021501)	Primpol (MGP_PahariEiJ_G0021502)	Casp3 (MGP_PahariEiJ_G0021503)	Irf2 (MGP_PahariEiJ_G0021504) #22	Enpp6 (MGP_PahariEiJ_G0021505) #23	Stox2 (MGP_PahariEiJ_G0021506) #24	Trappc11 (MGP_PahariEiJ_G0021507) #25	Rwdd4a (MGP_PahariEiJ_G0021508) #26	Ing2 (MGP_PahariEiJ_G0021509) #28	Cdkn2aip (MGP_PahariEiJ_G0021510) #30	Cldn24 (MGP_PahariEiJ_G0021511)	MGP_PahariEiJ_G0021512	Wwc2 (MGP_PahariEiJ_G0021513) #31	Dctd (MGP_PahariEiJ_G0021514) #32	Tenm3 (MGP_PahariEiJ_G0021515) #34	Aga (MGP_PahariEiJ_G0021517)	Neil3 (MGP_PahariEiJ_G0021518)	Vegfc (MGP_PahariEiJ_G0021519)	Spcs3 (MGP_PahariEiJ_G0021520)
Rat	MODERN SPECIES	7	Pdlim3 (ENSRNOG00000012658)	Ccdc110 (ENSRNOG00000045697)	C16h4orf47 (ENSRNOG00000038819)	Ufsp2 (ENSRNOG00000012087)	Ankrd37 (ENSRNOG00000031335)	Lrp2bp (ENSRNOG00000011178)	Snx25 (ENSRNOG00000011116)	Cfap97 (ENSRNOG00000032192)	Slc25a4 (ENSRNOG00000010830)	Helt (ENSRNOG00000010785)	AABR07005806.1 (ENSRNOG00000057653)	Acsl1 (ENSRNOG00000010633)	Cenpu (ENSRNOG00000022261)	Primpol (ENSRNOG00000022320)	Casp3 (ENSRNOG00000010475)	Irf2 (ENSRNOG00000009824) #22	Ndufa3-ps1 (ENSRNOG00000030778)	ENSRNOG00000067895	Enpp6 (ENSRNOG00000009660) #23	Stox2 (ENSRNOG00000009590) #24	Trappc11 (ENSRNOG00000022482) #25	Rwdd4 (ENSRNOG00000022500) #26	AABR07025743.1 (ENSRNOG00000033638)	ENSRNOG00000064469	Ing2 (ENSRNOG00000013480) #28	Cdkn2aip (ENSRNOG00000022736) #30	Cldn24 (ENSRNOG00000031521)	Cldn22 (ENSRNOG00000030889)	Wwc2 (ENSRNOG00000013248) #31	ENSRNOG00000065368	Dctd (ENSRNOG00000013215) #32
Upper Galilee mountains blind mole rat	MODERN SPECIES	1663	ENSNGAG00000020133	Sorbs2 (ENSNGAG00000014476)	Pdlim3 (ENSNGAG00000019438)	1700029J07Rik (ENSNGAG00000015902)	Ufsp2 (ENSNGAG00000008101)	Ankrd37 (ENSNGAG00000000581)	Lrp2bp (ENSNGAG00000007526)	Snx25 (ENSNGAG00000008889)	Cfap97 (ENSNGAG00000009449)	Slc25a4 (ENSNGAG00000000135)	Helt (ENSNGAG00000020770)	Acsl1 (ENSNGAG00000016023)	Cenpu (ENSNGAG00000012618)	Primpol (ENSNGAG00000017754)	Casp3 (ENSNGAG00000016499)	Irf2 (ENSNGAG00000018557) #22	Enpp6 (ENSNGAG00000015809) #23	Stox2 (ENSNGAG00000003590) #24	Trappc11 (ENSNGAG00000013133) #25	Rwdd4a (ENSNGAG00000009985) #26	ENSNGAG00000000155	Ing2 (ENSNGAG00000018610) #28	Cdkn2aip (ENSNGAG00000000929) #30	ENSNGAG00000016002	ENSNGAG00000015447 #31	ENSNGAG00000014995 #31	Dctd (ENSNGAG00000012430) #32
Lesser Egyptian jerboa	MODERN SPECIES	131	1700029J07Rik (ENSJJAG00000017798)	Ufsp2 (ENSJJAG00000018556)	Lrp2bp (ENSJJAG00000021416)	Snx25 (ENSJJAG00000011269)	ENSJJAG00000016310	Cfap97 (ENSJJAG00000022129)	Slc25a4 (ENSJJAG00000000440)	Helt (ENSJJAG00000000703)	ENSJJAG00000001971	Acsl1 (ENSJJAG00000011663)	Cenpu (ENSJJAG00000018172)	Primpol (ENSJJAG00000020921)	Casp3 (ENSJJAG00000010159)	ENSJJAG00000005302	ENSJJAG00000011175	ENSJJAG00000015216 #22	Enpp6 (ENSJJAG00000015782) #23	ENSJJAG00000023183	ENSJJAG00000000499	Stox2 (ENSJJAG00000020846) #24	ENSJJAG00000005969
Kangaroo rat	MODERN SPECIES	323	ENSDORG00000026924	Sorbs2 (ENSDORG00000005031)	Pdlim3 (ENSDORG00000008196)	ENSDORG00000008195	1700029J07Rik (ENSDORG00000028613)	Ufsp2 (ENSDORG00000008191)	Ankrd37 (ENSDORG00000008189)	Lrp2bp (ENSDORG00000003378)	Snx25 (ENSDORG00000003376)	Cfap97 (ENSDORG00000015705)	Slc25a4 (ENSDORG00000013787)	Acsl1 (ENSDORG00000005463)	ENSDORG00000002563	Primpol (ENSDORG00000002558)	Casp3 (ENSDORG00000002554)	Irf2 (ENSDORG00000001398) #22	Enpp6 (ENSDORG00000004165) #23	Stox2 (ENSDORG00000014878) #24	Trappc11 (ENSDORG00000014289) #25	Rwdd4a (ENSDORG00000014285) #26	Ing2 (ENSDORG00000015275) #28	Cdkn2aip (ENSDORG00000015273) #30	ENSDORG00000027703	Wwc2 (ENSDORG00000015270) #31	ENSDORG00000010593 #32	Tenm3 (ENSDORG00000007981) #34	Aga (ENSDORG00000014411)	ENSDORG00000002876	Vegfc (ENSDORG00000009540)	ENSDORG00000010006	Asb5 (ENSDORG00000009298)
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376.m #30	ENSGT00940000158376.n #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376.m #30	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851	ENSGT00910000144159.B
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376.m #30	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851	ENSGT00910000144159.B
Long-tailed chinchilla	MODERN SPECIES	110	SORBS2 (ENSCLAG00000011644)	PDLIM3 (ENSCLAG00000012689)	CCDC110 (ENSCLAG00000011136)	C4orf47 (ENSCLAG00000011416)	UFSP2 (ENSCLAG00000012131)	ANKRD37 (ENSCLAG00000011545)	LRP2BP (ENSCLAG00000013468)	SNX25 (ENSCLAG00000012397)	CFAP97 (ENSCLAG00000013411)	SLC25A4 (ENSCLAG00000012368)	HELT (ENSCLAG00000013564)	ACSL1 (ENSCLAG00000012854)	CENPU (ENSCLAG00000011512)	PRIMPOL (ENSCLAG00000012642)	ENSCLAG00000014245	IRF2 (ENSCLAG00000015934) #22	ENPP6 (ENSCLAG00000012884) #23	STOX2 (ENSCLAG00000015001) #24	TRAPPC11 (ENSCLAG00000016148) #25	RWDD4 (ENSCLAG00000014148) #26	ING2 (ENSCLAG00000014843) #28	CDKN2AIP (ENSCLAG00000012072) #30	WWC2 (ENSCLAG00000012066) #31	DCTD (ENSCLAG00000012757) #32	TENM3 (ENSCLAG00000013736) #34	AGA (ENSCLAG00000014580)	NEIL3 (ENSCLAG00000015661)	VEGFC (ENSCLAG00000013066)	SPCS3 (ENSCLAG00000015410)	ASB5 (ENSCLAG00000011261)	SPATA4 (ENSCLAG00000011629)
Degu	MODERN SPECIES	155	ENSODEG00000004559	ENSODEG00000004502	ANKRD37 (ENSODEG00000004483)	LRP2BP (ENSODEG00000004365)	ENSODEG00000004230	SNX25 (ENSODEG00000004714)	CFAP97 (ENSODEG00000004330)	ENSODEG00000004319	HELT (ENSODEG00000004307)	ENSODEG00000019028	ACSL1 (ENSODEG00000004265)	CENPU (ENSODEG00000004238)	PRIMPOL (ENSODEG00000004070)	ENSODEG00000005237	ENSODEG00000005217	ENSODEG00000005179 #22	ENSODEG00000005107	ENSODEG00000019198	ENPP6 (ENSODEG00000005075) #23	STOX2 (ENSODEG00000005044) #24	TRAPPC11 (ENSODEG00000004866) #25	ENSODEG00000004702 #26	ENSODEG00000019059	ING2 (ENSODEG00000004668) #28	ENSODEG00000004569 #30	ENSODEG00000005481	ENSODEG00000005460 ##31	DCTD (ENSODEG00000005367) #32	ENSODEG00000005312 #34	ENSODEG00000005299	ENSODEG00000005279 #34
Guinea pig	MODERN SPECIES	36	SORBS2 (ENSCPOG00000004903)	PDLIM3 (ENSCPOG00000038072)	CCDC110 (ENSCPOG00000010137)	C4orf47 (ENSCPOG00000010135)	UFSP2 (ENSCPOG00000010131)	ANKRD37 (ENSCPOG00000026600)	LRP2BP (ENSCPOG00000035669)	SNX25 (ENSCPOG00000010122)	CFAP97 (ENSCPOG00000013081)	SLC25A4 (ENSCPOG00000005275)	HELT (ENSCPOG00000038449)	Acsl1 (ENSCPOG00000002734)	CENPU (ENSCPOG00000034557)	PRIMPOL (ENSCPOG00000002732)	ENSCPOG00000012511	IRF2 (ENSCPOG00000013097) #22	ENPP6 (ENSCPOG00000002554) #23	STOX2 (ENSCPOG00000036387) #24	TRAPPC11 (ENSCPOG00000011620) #25	ING2 (ENSCPOG00000012109) #28	CDKN2AIP (ENSCPOG00000035168) #30	WWC2 (ENSCPOG00000002473) #31	DCTD (ENSCPOG00000040207) #32	TENM3 (ENSCPOG00000009475) #34	AGA (ENSCPOG00000002674)	NEIL3 (ENSCPOG00000003297)	VEGFC (ENSCPOG00000035891)	SPCS3 (ENSCPOG00000008544)	ASB5 (ENSCPOG00000013084)	SPATA4 (ENSCPOG00000024215)	WDR17 (ENSCPOG00000019958)
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000003584	ANKRD37 (ENSHGLG00000038362)	ENSHGLG00000049813	ENSHGLG00000036806	ENSHGLG00000005343	CFAP97 (ENSHGLG00000003876)	SLC25A4 (ENSHGLG00000039769)	ENSHGLG00000037314	ENSHGLG00000046242	HELT (ENSHGLG00000004604)	ENSHGLG00000046299	ACSL1 (ENSHGLG00000003274)	ENSHGLG00000005399	PRIMPOL (ENSHGLG00000003784)	ENSHGLG00000032894	IRF2 (ENSHGLG00000034854) #22	ENPP6 (ENSHGLG00000018912) #23	STOX2 (ENSHGLG00000016104) #24	TRAPPC11 (ENSHGLG00000015695) #25	RWDD4 (ENSHGLG00000017188) #26	ING2 (ENSHGLG00000009825) #28	CDKN2AIP (ENSHGLG00000034491) #30	ENSHGLG00000018243	ENSHGLG00000050499	WWC2 (ENSHGLG00000018666) #31	DCTD (ENSHGLG00000018838) #32	ENSHGLG00000003748	ENSHGLG00000006389 #34	ADH5 (ENSHGLG00000036012)	ENSHGLG00000000109	ENSHGLG00000005432
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00940000156741	ENSGT01040000240547	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.cb	ENSGT00940000162234.bb	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Marmotini	ANCESTRAL SPECIES	30	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.y.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545.u #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.f	ENSGT00940000161922.i.b.e	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Marmotini_b	ANCESTRAL SPECIES	72	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263778	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.y.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545.u #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.cb	ENSGT00940000162234.bb	ENSGT00940000161922.i.b.f	ENSGT00940000161922.i.b.e	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34
Arctic ground squirrel	MODERN SPECIES	231												ACSL1 (ENSUPAG00010001148)	CENPU (ENSUPAG00010001999)	ENSUPAG00010002010	ENSUPAG00010002027	IRF2 (ENSUPAG00010002037) #22	ENPP6 (ENSUPAG00010002074) #23	STOX2 (ENSUPAG00010002101) #24	TRAPPC11 (ENSUPAG00010002107) #25	ENSUPAG00010002132 #26	ING2 (ENSUPAG00010002161) #28	CDKN2AIP (ENSUPAG00010002169) #30	ENSUPAG00010002183	ENSUPAG00010002187	WWC2 (ENSUPAG00010002189) #31	DCTD (ENSUPAG00010002217) #32	TENM3 (ENSUPAG00010002250) #34
Squirrel	MODERN SPECIES	154	SORBS2 (ENSSTOG00000015244)	PDLIM3 (ENSSTOG00000014193)	ENSSTOG00000022515	C4orf47 (ENSSTOG00000028227)	UFSP2 (ENSSTOG00000013037)	ANKRD37 (ENSSTOG00000013029)	LRP2BP (ENSSTOG00000013024)	SNX25 (ENSSTOG00000013013)	CFAP97 (ENSSTOG00000010864)	SLC25A4 (ENSSTOG00000024682)	HELT (ENSSTOG00000009054)	ACSL1 (ENSSTOG00000009009)	CENPU (ENSSTOG00000034632)	PRIMPOL (ENSSTOG00000004912)	ENSSTOG00000003865	IRF2 (ENSSTOG00000003228) #22	ENPP6 (ENSSTOG00000016502) #23	STOX2 (ENSSTOG00000016497) #24	TRAPPC11 (ENSSTOG00000013088) #25	ENSSTOG00000013086 #26	ING2 (ENSSTOG00000014291) #28	CDKN2AIP (ENSSTOG00000027051) #30	ENSSTOG00000027686	ENSSTOG00000027326	WWC2 (ENSSTOG00000014261) #31	DCTD (ENSSTOG00000005462) #32	TENM3 (ENSSTOG00000012468) #34	GDF10 (ENSSTOG00000025106)	GDF2 (ENSSTOG00000028739)	RBP3 (ENSSTOG00000023149)	ZNF488 (ENSSTOG00000015147)
Alpin marmot	MODERN SPECIES	17	SORBS2 (ENSMMMG00000010667)	PDLIM3 (ENSMMMG00000012081)	CCDC110 (ENSMMMG00000012110)	C4orf47 (ENSMMMG00000012122)	UFSP2 (ENSMMMG00000012142)	ANKRD37 (ENSMMMG00000012155)	LRP2BP (ENSMMMG00000012163)	SNX25 (ENSMMMG00000012181)	CFAP97 (ENSMMMG00000012234)	SLC25A4 (ENSMMMG00000012249)	HELT (ENSMMMG00000012257)	ACSL1 (ENSMMMG00000012277)	ENSMMMG00000012403	ENSMMMG00000012420	ENSMMMG00000012424	IRF2 (ENSMMMG00000012444) #22	ENPP6 (ENSMMMG00000012465) #23	STOX2 (ENSMMMG00000012483) #24	TRAPPC11 (ENSMMMG00000012528) #25	ENSMMMG00000012560 #26	ING2 (ENSMMMG00000012572) #28	CDKN2AIP (ENSMMMG00000012577) #30	ENSMMMG00000012586	ENSMMMG00000012589	WWC2 (ENSMMMG00000012593) #31	DCTD (ENSMMMG00000012615) #32	TENM3 (ENSMMMG00000012655) #34	AGA (ENSMMMG00000012785)	NEIL3 (ENSMMMG00000012802)	VEGFC (ENSMMMG00000012828)	ENSMMMG00000012853
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005004094	C4orf47 (ENSSVLG00005004080)	UFSP2 (ENSSVLG00005004055)	ANKRD37 (ENSSVLG00005004043)	LRP2BP (ENSSVLG00005004014)	SNX25 (ENSSVLG00005003954)	CFAP97 (ENSSVLG00005003904)	SLC25A4 (ENSSVLG00005003887)	HELT (ENSSVLG00005003859)	ENSSVLG00005003842	ACSL1 (ENSSVLG00005003813)	ENSSVLG00005003774	PRIMPOL (ENSSVLG00005003718)	CASP3 (ENSSVLG00005003677)	ENSSVLG00005003654	IRF2 (ENSSVLG00005003630) #22	ENPP6 (ENSSVLG00005003610) #23	ENSSVLG00005003590 #24	TRAPPC11 (ENSSVLG00005003499) #25	RWDD4 (ENSSVLG00005003423) #26	ING2 (ENSSVLG00005003400) #28	CDKN2AIP (ENSSVLG00005003382) #30	ENSSVLG00005003376	ENSSVLG00005003361	WWC2 (ENSSVLG00005003319) #31	DCTD (ENSSVLG00005003300) #32	TENM3 (ENSSVLG00005003236) #34	AGA (ENSSVLG00005003168)	NEIL3 (ENSSVLG00005003141)	VEGFC (ENSSVLG00005003095)	ENSSVLG00005003081
Lagomorpha	ANCESTRAL SPECIES	114	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34
Rabbit	MODERN SPECIES	11	CCDC110 (ENSOCUG00000005799)	C4orf47 (ENSOCUG00000004810)	UFSP2 (ENSOCUG00000012375)	ANKRD37 (ENSOCUG00000012369)	LRP2BP (ENSOCUG00000012365)	SNX25 (ENSOCUG00000012354)	CFAP97 (ENSOCUG00000002591)	SLC25A4 (ENSOCUG00000002594)	HELT (ENSOCUG00000009448)	ENSOCUG00000005617	ENSOCUG00000037022	ENSOCUG00000037500	CENPU (ENSOCUG00000003903)	ENSOCUG00000003897	CASP3 (ENSOCUG00000006627)	IRF2 (ENSOCUG00000009229) #22	ENPP6 (ENSOCUG00000011944) #23	STOX2 (ENSOCUG00000009718) #24	TRAPPC11 (ENSOCUG00000010179) #25	RWDD4 (ENSOCUG00000025497) #26	ING2 (ENSOCUG00000011812) #28	CDKN2AIP (ENSOCUG00000005491) #30	ENSOCUG00000033632	ENSOCUG00000034698	WWC2 (ENSOCUG00000016984) #31	DCTD (ENSOCUG00000004708) #32	TENM3 (ENSOCUG00000007616) #34	ENSOCUG00000028118 ##34	ENSOCUG00000022735	AGA (ENSOCUG00000002031)	ENSOCUG00000022964
Pika	MODERN SPECIES	3491																IRF2 (ENSOPRG00000005398) #22	ENPP6 (ENSOPRG00000005378) #23	STOX2 (ENSOPRG00000005374) #24
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Artiodactyla	ANCESTRAL SPECIES	24	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Suina	ANCESTRAL SPECIES	3	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Pig	MODERN SPECIES	6	PDLIM3 (ENSSSCG00000015796)	ENSSSCG00000015795	C4orf47 (ENSSSCG00000015794)	UFSP2 (ENSSSCG00000015793)	ANKRD37 (ENSSSCG00000015798)	LRP2BP (ENSSSCG00000015792)	SNX25 (ENSSSCG00000015789)	CFAP97 (ENSSSCG00000015791)	SLC25A4 (ENSSSCG00000015790)	HELT (ENSSSCG00000038390)	ENSSSCG00000053593	ACSL1 (ENSSSCG00000015784)	CENPU (ENSSSCG00000015785)	CASP3 (ENSSSCG00000034012)	PRIMPOL (ENSSSCG00000015786)	IRF2 (ENSSSCG00000015782) #22	ENPP6 (ENSSSCG00000015781) #23	STOX2 (ENSSSCG00000015780) #24	TRAPPC11 (ENSSSCG00000015777) #25	RWDD4 (ENSSSCG00000015776) #26	ING2 (ENSSSCG00000024555) #28	CDKN2AIP (ENSSSCG00000015779) #30	ENSSSCG00000022456	CLDN22 (ENSSSCG00000027901)	ENSSSCG00000033315	WWC2 (ENSSSCG00000021731) #31	DCTD (ENSSSCG00000015775) #32	TENM3 (ENSSSCG00000015774) #34	ENSSSCG00000048815	ENSSSCG00000050308	ENSSSCG00000055184
Chacoan peccary	MODERN SPECIES	87	PDLIM3 (ENSCWAG00000003317)	ENSCWAG00000003273	C4orf47 (ENSCWAG00000003255)	UFSP2 (ENSCWAG00000003232)	ANKRD37 (ENSCWAG00000003220)	LRP2BP (ENSCWAG00000003209)	SNX25 (ENSCWAG00000003154)	CFAP97 (ENSCWAG00000003117)	SLC25A4 (ENSCWAG00000003099)	HELT (ENSCWAG00000003084)	ACSL1 (ENSCWAG00000002984)	CENPU (ENSCWAG00000002898)	PRIMPOL (ENSCWAG00000002854)	CASP3 (ENSCWAG00000002835)	ENSCWAG00000002822	IRF2 (ENSCWAG00000002803) #22	ENPP6 (ENSCWAG00000002789) #23	ENSCWAG00000002776 #24	TRAPPC11 (ENSCWAG00000002715) #25	RWDD4 (ENSCWAG00000002685) #26	ING2 (ENSCWAG00000002669) #28	CDKN2AIP (ENSCWAG00000002663) #30	ENSCWAG00000002647	ENSCWAG00000002644	ENSCWAG00000002638	WWC2 (ENSCWAG00000002574) #31	DCTD (ENSCWAG00000002557) #32	TENM3 (ENSCWAG00000002535) #34	AGA (ENSCWAG00000002514)	NEIL3 (ENSCWAG00000002489)	VEGFC (ENSCWAG00000002469)
Artiodactyla_a	ANCESTRAL SPECIES	25	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Camelidae	ANCESTRAL SPECIES	35	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Arabian camel	MODERN SPECIES	18	SORBS2 (ENSCDRG00005012253)	PDLIM3 (ENSCDRG00005013892)	ENSCDRG00005014233	C4orf47 (ENSCDRG00005014306)	UFSP2 (ENSCDRG00005014346)	ANKRD37 (ENSCDRG00005014407)	LRP2BP (ENSCDRG00005014460)	SNX25 (ENSCDRG00005014527)	CFAP97 (ENSCDRG00005014860)	SLC25A4 (ENSCDRG00005014896)	HELT (ENSCDRG00005014948)	ACSL1 (ENSCDRG00005015058)	CENPU (ENSCDRG00005015460)	PRIMPOL (ENSCDRG00005015548)	CASP3 (ENSCDRG00005015657)	IRF2 (ENSCDRG00005015715) #22	ENPP6 (ENSCDRG00005015776) #23	STOX2 (ENSCDRG00005015820) #24	TRAPPC11 (ENSCDRG00005015900) #25	RWDD4 (ENSCDRG00005016171) #26	ING2 (ENSCDRG00005016228) #28	CDKN2AIP (ENSCDRG00005016254) #30	ENSCDRG00005016304	ENSCDRG00005016322	WWC2 (ENSCDRG00005016343) #31	DCTD (ENSCDRG00005016433) #32	ENSCDRG00005016533	TENM3 (ENSCDRG00005016886) #34	AGA (ENSCDRG00005021201)	NEIL3 (ENSCDRG00005021208)	VEGFC (ENSCDRG00005021212)
Alpaca	MODERN SPECIES	1582												ACSL1 (ENSVPAG00000011301)	CENPU (ENSVPAG00000011300)	PRIMPOL (ENSVPAG00000011299)	CASP3 (ENSVPAG00000011298)	IRF2 (ENSVPAG00000011297) #22	ENPP6 (ENSVPAG00000011296) #23
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Cetacea	ANCESTRAL SPECIES	22	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000154559.C	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00390000005606	ENSGT00940000157913	ENSGT01010000222313.A.a	ENSGT00940000153798.A.a
Odontoceti	ANCESTRAL SPECIES	23	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000154559.C	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00390000005606	ENSGT00940000157913	ENSGT01010000222313.A.a	ENSGT00940000153798.A.a
Odontoceti_a	ANCESTRAL SPECIES	25	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000154559.C	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00390000005606	ENSGT00940000157913	ENSGT01010000222313.A.a	ENSGT00940000153798.A.a
Dolphin	MODERN SPECIES	5185																IRF2 (ENSTTRG00000009391) #22	ENPP6 (ENSTTRG00000009403) #23	STOX2 (ENSTTRG00000009414) #24
Odontoceti_b	ANCESTRAL SPECIES	23	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000154559.C	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00390000005606	ENSGT00940000157913	ENSGT01010000222313.A.a	ENSGT00940000153798.A.a
Vaquita	MODERN SPECIES	13	SORBS2 (ENSPSNG00000021428)	PDLIM3 (ENSPSNG00000021208)	ENSPSNG00000021093	C4orf47 (ENSPSNG00000021067)	UFSP2 (ENSPSNG00000021033)	ANKRD37 (ENSPSNG00000021009)	LRP2BP (ENSPSNG00000020939)	SNX25 (ENSPSNG00000020775)	CFAP97 (ENSPSNG00000020687)	SLC25A4 (ENSPSNG00000020655)	HELT (ENSPSNG00000020590)	ENSPSNG00000020474	CENPU (ENSPSNG00000020394)	PRIMPOL (ENSPSNG00000020362)	CASP3 (ENSPSNG00000020309)	IRF2 (ENSPSNG00000020255) #22	ENSPSNG00000020229	ENPP6 (ENSPSNG00000020204) #23	STOX2 (ENSPSNG00000020179) #24	TRAPPC11 (ENSPSNG00000019989) #25	RWDD4 (ENSPSNG00000019885) #26	ING2 (ENSPSNG00000019856) #28	CDKN2AIP (ENSPSNG00000019817) #30	ENSPSNG00000019803	WWC2 (ENSPSNG00000019677) #31	ENSPSNG00000019632	ZNF596 (ENSPSNG00000019587)	ENSPSNG00000019545	FBXO25 (ENSPSNG00000019424)	TDRP (ENSPSNG00000019346)	ENSPSNG00000019324
Monodontidae	ANCESTRAL SPECIES	24	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000154559.C	ENSGT01010000229312	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00390000005606	ENSGT00940000157913	ENSGT01010000222313.A.a
Narwhal	MODERN SPECIES	303	SORBS2 (ENSMMNG00015012534)	PDLIM3 (ENSMMNG00015012763)	ENSMMNG00015012797	C4orf47 (ENSMMNG00015012810)	UFSP2 (ENSMMNG00015012825)	ANKRD37 (ENSMMNG00015012844)	LRP2BP (ENSMMNG00015012861)	SNX25 (ENSMMNG00015012903)	CFAP97 (ENSMMNG00015012994)	SLC25A4 (ENSMMNG00015013005)	HELT (ENSMMNG00015013028)	ENSMMNG00015013091	CENPU (ENSMMNG00015013130)	PRIMPOL (ENSMMNG00015013155)	CASP3 (ENSMMNG00015013176)	IRF2 (ENSMMNG00015004968) #22	ENSMMNG00015004976	ENPP6 (ENSMMNG00015004985) #23	STOX2 (ENSMMNG00015004999) #24	TRAPPC11 (ENSMMNG00015005009) #25	RWDD4 (ENSMMNG00015005041) #26	ING2 (ENSMMNG00015005058) #28	CDKN2AIP (ENSMMNG00015005065) #30	WWC2 (ENSMMNG00015005087) #31	ZNF596 (ENSMMNG00015005106)	ENSMMNG00015005115	FBXO25 (ENSMMNG00015005136)	TDRP (ENSMMNG00015005154)	ERICH1 (ENSMMNG00015005159)	DLGAP2 (ENSMMNG00015005183)	ENSMMNG00015005255
Beluga whale	MODERN SPECIES	30	SORBS2 (ENSDLEG00000005191)	PDLIM3 (ENSDLEG00000005173)	ENSDLEG00000005168	C4orf47 (ENSDLEG00000005164)	UFSP2 (ENSDLEG00000005150)	ANKRD37 (ENSDLEG00000005144)	LRP2BP (ENSDLEG00000005138)	SNX25 (ENSDLEG00000005128)	CFAP97 (ENSDLEG00000005122)	SLC25A4 (ENSDLEG00000005117)	HELT (ENSDLEG00000005105)	ACSL1 (ENSDLEG00000005073)	CENPU (ENSDLEG00000005048)	PRIMPOL (ENSDLEG00000005040)	CASP3 (ENSDLEG00000005033)	IRF2 (ENSDLEG00000005022) #22	ENSDLEG00000004989	ENPP6 (ENSDLEG00000004983) #23	STOX2 (ENSDLEG00000004972) #24	TRAPPC11 (ENSDLEG00000004943) #25	RWDD4 (ENSDLEG00000004935) #26	ING2 (ENSDLEG00000004929) #28	CDKN2AIP (ENSDLEG00000004926) #30	ENSDLEG00000004922	WWC2 (ENSDLEG00000004909) #31	ZNF596 (ENSDLEG00000004898)	ENSDLEG00000004896	FBXO25 (ENSDLEG00000004884)	TDRP (ENSDLEG00000004873)	ENSDLEG00000004863	DLGAP2 (ENSDLEG00000004774)
Sperm whale	MODERN SPECIES	12	SORBS2 (ENSPCTG00005008045)	PDLIM3 (ENSPCTG00005008492)	ENSPCTG00005008609	C20H4orf47 (ENSPCTG00005008647)	UFSP2 (ENSPCTG00005008682)	ANKRD37 (ENSPCTG00005008722)	LRP2BP (ENSPCTG00005008755)	SNX25 (ENSPCTG00005008854)	CFAP97 (ENSPCTG00005009307)	SLC25A4 (ENSPCTG00005009344)	HELT (ENSPCTG00005009377)	ACSL1 (ENSPCTG00005009490)	CENPU (ENSPCTG00005009654)	PRIMPOL (ENSPCTG00005009848)	CASP3 (ENSPCTG00005009908)	IRF2 (ENSPCTG00005009966) #22	ENSPCTG00005010011	ENPP6 (ENSPCTG00005010054) #23	STOX2 (ENSPCTG00005010154) #24	TRAPPC11 (ENSPCTG00005010217) #25	RWDD4 (ENSPCTG00005010517) #26	ING2 (ENSPCTG00005010587) #28	CDKN2AIP (ENSPCTG00005010634) #30	ENSPCTG00005010699 #30	ENSPCTG00005010748	WWC2 (ENSPCTG00005010891) #31	ZNF596 (ENSPCTG00005011048)	FBXO25 (ENSPCTG00005011146)	TDRP (ENSPCTG00005011235)	ENSPCTG00005011277	DLGAP2 (ENSPCTG00005011309)
Blue whale	MODERN SPECIES	13	TLR3 (ENSBMSG00010021907)	SORBS2 (ENSBMSG00010021422)	PDLIM3 (ENSBMSG00010021207)	ENSBMSG00010021179	C4orf47 (ENSBMSG00010021174)	UFSP2 (ENSBMSG00010021139)	LRP2BP (ENSBMSG00010021115)	SNX25 (ENSBMSG00010021055)	CFAP97 (ENSBMSG00010020941)	SLC25A4 (ENSBMSG00010020925)	HELT (ENSBMSG00010020912)	ENSBMSG00010020874	CENPU (ENSBMSG00010020844)	PRIMPOL (ENSBMSG00010020827)	CASP3 (ENSBMSG00010020797)	IRF2 (ENSBMSG00010020778) #22	ENPP6 (ENSBMSG00010020756) #23	ENSBMSG00010020747 #24	TRAPPC11 (ENSBMSG00010020704) #25	ENSBMSG00010020668 #26	ING2 (ENSBMSG00010020653) #28	CDKN2AIP (ENSBMSG00010020641) #30	ENSBMSG00010020629	WWC2 (ENSBMSG00010020554) #31	ZNF596 (ENSBMSG00010020519)	FBXO25 (ENSBMSG00010020424)	TDRP (ENSBMSG00010020369)	ERICH1 (ENSBMSG00010020348)	DLGAP2 (ENSBMSG00010019985)	CLN8 (ENSBMSG00010019945)	ENSBMSG00010019918
Pecora	ANCESTRAL SPECIES	31	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Percora_a	ANCESTRAL SPECIES	31	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Bovidae	ANCESTRAL SPECIES	30	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Caprinae	ANCESTRAL SPECIES	31	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00390000018086.z.h.a.b.a.b.a.c.a	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Goat	MODERN SPECIES	19	ENSCHIG00000009094	PDLIM3 (ENSCHIG00000025204)	ENSCHIG00000018232	C4orf47 (ENSCHIG00000023521)	UFSP2 (ENSCHIG00000012419)	ANKRD37 (ENSCHIG00000024114)	LRP2BP (ENSCHIG00000023620)	SNX25 (ENSCHIG00000020234)	CFAP97 (ENSCHIG00000019351)	SLC25A4 (ENSCHIG00000026699)	HELT (ENSCHIG00000008691)	ACSL1 (ENSCHIG00000022508)	CENPU (ENSCHIG00000012552)	PRIMPOL (ENSCHIG00000016242)	CASP3 (ENSCHIG00000013628)	IRF2 (ENSCHIG00000017518) #22	ENPP6 (ENSCHIG00000003219) #23	STOX2 (ENSCHIG00000002126) #24	TRAPPC11 (ENSCHIG00000011228) #25	RWDD4 (ENSCHIG00000015219) #26	ENSCHIG00000004497	ING2 (ENSCHIG00000012188) #28	CDKN2AIP (ENSCHIG00000021180) #30	ENSCHIG00000008660	ENSCHIG00000005029	WWC2 (ENSCHIG00000016217) #31	DCTD (ENSCHIG00000010700) #32	TENM3 (ENSCHIG00000011185) #34	ENSCHIG00000017110 #34	ENSCHIG00000008084	ENSCHIG00000003428
Rambouillet Sheep	MODERN SPECIES	18	CYP4V2 (ENSOARG00020018832)	SORBS2 (ENSOARG00020015782)	PDLIM3 (ENSOARG00020015386)	ENSOARG00020015181	C4orf47 (ENSOARG00020015119)	UFSP2 (ENSOARG00020015057)	ANKRD37 (ENSOARG00020014995)	LRP2BP (ENSOARG00020014866)	SNX25 (ENSOARG00020014331)	CFAP97 (ENSOARG00020014262)	SLC25A4 (ENSOARG00020014234)	HELT (ENSOARG00020014117)	ACSL1 (ENSOARG00020013348)	PRIMPOL (ENSOARG00020013241)	CASP3 (ENSOARG00020013157)	IRF2 (ENSOARG00020013042) #22	ENPP6 (ENSOARG00020012535) #23	STOX2 (ENSOARG00020012344) #24	TRAPPC11 (ENSOARG00020011964) #25	RWDD4 (ENSOARG00020011673) #26	ENSOARG00020011629	ENSOARG00020011624	ING2 (ENSOARG00020025427) #28	CDKN2AIP (ENSOARG00020025421) #30	ENSOARG00020025415	ENSOARG00020025411	ENSOARG00020025406	WWC2 (ENSOARG00020025347) #31	DCTD (ENSOARG00020025328) #32	TENM3 (ENSOARG00020025305) #34	AGA (ENSOARG00020025240)
Bovinae	ANCESTRAL SPECIES	36	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000161381.f.b	ENSGT00940000156167.b
Bos	ANCESTRAL SPECIES	33	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000161381.f.b	ENSGT00940000156167.b
Bos_b	ANCESTRAL SPECIES	35	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a.c	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Cow	MODERN SPECIES	19	SORBS2 (ENSBTAG00000016486)	PDLIM3 (ENSBTAG00000017183)	CCDC110 (ENSBTAG00000017157)	C27H4orf47 (ENSBTAG00000034430)	UFSP2 (ENSBTAG00000018454)	ANKRD37 (ENSBTAG00000018453)	LRP2BP (ENSBTAG00000005094)	SNX25 (ENSBTAG00000010351)	CFAP97 (ENSBTAG00000013211)	SLC25A4 (ENSBTAG00000013208)	HELT (ENSBTAG00000014704)	CENPU (ENSBTAG00000018864)	ACSL1 (ENSBTAG00000004344)	PRIMPOL (ENSBTAG00000018863)	CASP3 (ENSBTAG00000015874)	IRF2 (ENSBTAG00000010002) #22	ENPP6 (ENSBTAG00000011573) #23	STOX2 (ENSBTAG00000008886) #24	TRAPPC11 (ENSBTAG00000007422) #25	RWDD4 (ENSBTAG00000003081) #26	ING2 (ENSBTAG00000047706) #28	CDKN2AIP (ENSBTAG00000000957) #30	ENSBTAG00000051927	ENSBTAG00000052405	WWC2 (ENSBTAG00000012191) #31	DCTD (ENSBTAG00000020282) #32	TENM3 (ENSBTAG00000021133) #34	ENSBTAG00000047749 #34	AGA (ENSBTAG00000017085)	NEIL3 (ENSBTAG00000005825)	ENSBTAG00000054577
Hybrid Bos Indicus	MODERN SPECIES	19	SORBS2 (ENSBIXG00005006225)	PDLIM3 (ENSBIXG00005014632)	ENSBIXG00005014687	C4orf47 (ENSBIXG00005014697)	UFSP2 (ENSBIXG00005014724)	ANKRD37 (ENSBIXG00005002078)	SNX25 (ENSBIXG00005014831)	CFAP97 (ENSBIXG00005006134)	ENSBIXG00005014957	HELT (ENSBIXG00005014969)	CENPU (ENSBIXG00005015004)	ACSL1 (ENSBIXG00005015369)	PRIMPOL (ENSBIXG00005015465)	CASP3 (ENSBIXG00005007320)	ENSBIXG00005015516	IRF2 (ENSBIXG00005015556) #22	ENSBIXG00005006563	ENPP6 (ENSBIXG00005007140) #23	STOX2 (ENSBIXG00005015678) #24	TRAPPC11 (ENSBIXG00005015785) #25	RWDD4 (ENSBIXG00005015843) #26	ING2 (ENSBIXG00005015847) #28	CDKN2AIP (ENSBIXG00005015874) #30	ENSBIXG00005015879	ENSBIXG00005015891	ENSBIXG00005015897	ENSBIXG00005015900	WWC2 (ENSBIXG00005015995) #31	ENSBIXG00005016038 #32	ENSBIXG00005016044	TENM3 (ENSBIXG00005016109) #34
Bos_a	ANCESTRAL SPECIES	31	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240629	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.g	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000161381.f.b	ENSGT00940000156167.b	ENSGT00390000009223
Wild yak	MODERN SPECIES	1497													ENSBMUG00000001268	ENSBMUG00000001277	CASP3 (ENSBMUG00000001303)	IRF2 (ENSBMUG00000001350) #22	ENPP6 (ENSBMUG00000001361) #23	STOX2 (ENSBMUG00000001426) #24
Domestic yak	MODERN SPECIES	20	ENSBGRG00000018228	ENSBGRG00000018340	UFSP2 (ENSBGRG00000018438)	ANKRD37 (ENSBGRG00000018691)	LRP2BP (ENSBGRG00000018742)	SNX25 (ENSBGRG00000018853)	CFAP97 (ENSBGRG00000019269)	SLC25A4 (ENSBGRG00000019340)	HELT (ENSBGRG00000019362)	ENSBGRG00000019485	ACSL1 (ENSBGRG00000019548)	ENSBGRG00000020136	CENPU (ENSBGRG00000020186)	PRIMPOL (ENSBGRG00000020486)	CASP3 (ENSBGRG00000020580)	IRF2 (ENSBGRG00000020711) #22	ENPP6 (ENSBGRG00000020769) #23	ENSBGRG00000020854 #24	ENSBGRG00000020882 #24	ENSBGRG00000020927 #24	TRAPPC11 (ENSBGRG00000020963) #25	RWDD4 (ENSBGRG00000007035) #26	ING2 (ENSBGRG00000007303) #28	ENSBGRG00000007321 #30	ENSBGRG00000007343 #30	ENSBGRG00000007420	WWC2 (ENSBGRG00000007531) #31	DCTD (ENSBGRG00000007650) #32	TENM3 (ENSBGRG00000007837) #34	ENSBGRG00000008180	ENSBGRG00000008196
American bison	MODERN SPECIES	2986	SORBS2 (ENSBBBG00000003262)	PDLIM3 (ENSBBBG00000001406)	ENSBBBG00000014415	C4orf47 (ENSBBBG00000014420)	UFSP2 (ENSBBBG00000014429)	ANKRD37 (ENSBBBG00000014436)	LRP2BP (ENSBBBG00000014456)	SNX25 (ENSBBBG00000003380)	CFAP97 (ENSBBBG00000014521)	SLC25A4 (ENSBBBG00000014526)	HELT (ENSBBBG00000014542)	ACSL1 (ENSBBBG00000014758)	CENPU (ENSBBBG00000014806)	PRIMPOL (ENSBBBG00000014841)	CASP3 (ENSBBBG00000014877)	IRF2 (ENSBBBG00000003678) #22	ENPP6 (ENSBBBG00000001236) #23	STOX2 (ENSBBBG00000001212) #24	TRAPPC11 (ENSBBBG00000001104) #25	RWDD4 (ENSBBBG00000001051) #26	ING2 (ENSBBBG00000001040) #28	CDKN2AIP (ENSBBBG00000001026) #30	ENSBBBG00000001017	ENSBBBG00000001010	ENSBBBG00000001002 #31	ENSBBBG00000000989 #31	DCTD (ENSBBBG00000000960) #32	TENM3 (ENSBBBG00000000912) #34
Siberian musk deer	MODERN SPECIES	370	ENSMMSG00000019352	C4orf47 (ENSMMSG00000019295)	UFSP2 (ENSMMSG00000019260)	ANKRD37 (ENSMMSG00000019229)	LRP2BP (ENSMMSG00000019190)	ENSMMSG00000019131	SNX25 (ENSMMSG00000018940)	CFAP97 (ENSMMSG00000018895)	ENSMMSG00000018882	SLC25A4 (ENSMMSG00000018855)	HELT (ENSMMSG00000018781)	ACSL1 (ENSMMSG00000018612)	CENPU (ENSMMSG00000018468)	PRIMPOL (ENSMMSG00000018428)	CASP3 (ENSMMSG00000018387)	IRF2 (ENSMMSG00000018352) #22	ENPP6 (ENSMMSG00000018328) #23	STOX2 (ENSMMSG00000018296) #24	TRAPPC11 (ENSMMSG00000018165) #25	ENSMMSG00000018100 #26	ING2 (ENSMMSG00000018064) #28	CDKN2AIP (ENSMMSG00000018038) #30	ENSMMSG00000018020	ENSMMSG00000018007	WWC2 (ENSMMSG00000017895) #31	DCTD (ENSMMSG00000017817) #32	TENM3 (ENSMMSG00000017737) #34
Yarkand deer	MODERN SPECIES	25	SORBS2 (ENSCHYG00000011248)	PDLIM3 (ENSCHYG00000010844)	ENSCHYG00000010735	C4orf47 (ENSCHYG00000010642)	UFSP2 (ENSCHYG00000010470)	ANKRD37 (ENSCHYG00000010411)	LRP2BP (ENSCHYG00000010327)	SNX25 (ENSCHYG00000010047)	CFAP97 (ENSCHYG00000009938)	SLC25A4 (ENSCHYG00000009889)	HELT (ENSCHYG00000009820)	ACSL1 (ENSCHYG00000009253)	CENPU (ENSCHYG00000008853)	PRIMPOL (ENSCHYG00000008693)	CASP3 (ENSCHYG00000008657)	IRF2 (ENSCHYG00000024184) #22	ENPP6 (ENSCHYG00000024145) #23	STOX2 (ENSCHYG00000023957) #24	TRAPPC11 (ENSCHYG00000023408) #25	ENSCHYG00000023315 #26	ING2 (ENSCHYG00000023296) #28	CDKN2AIP (ENSCHYG00000023261) #30	WWC2 (ENSCHYG00000022971) #31	DCTD (ENSCHYG00000022883) #32	TENM3 (ENSCHYG00000022619) #34	ENSCHYG00000022559	ENSCHYG00000022545	AGA (ENSCHYG00000022427)	NEIL3 (ENSCHYG00000022358)	VEGFC (ENSCHYG00000022266)	ENSCHYG00000022200
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Caniformia	ANCESTRAL SPECIES	28	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00940000171084	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Caniformia_b	ANCESTRAL SPECIES	30	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154037.C.f	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00940000171084	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Ursidae	ANCESTRAL SPECIES	38	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154037.C.f	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00950000183164.E.c.b.a	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00390000011010.b.h.a.b	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Ursus	ANCESTRAL SPECIES	160	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b.b	ENSGT00940000160388	ENSGT00940000154037.C.f	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00390000016470.s.a.a	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24
American black bear	MODERN SPECIES	3655														CASP3 (ENSUAMG00000016196)	ENSUAMG00000016198	IRF2 (ENSUAMG00000016201) #22
Polar bear	MODERN SPECIES	422	ENSUMAG00000012990	C4orf47 (ENSUMAG00000013014)	UFSP2 (ENSUMAG00000013019)	ANKRD37 (ENSUMAG00000013023)	LRP2BP (ENSUMAG00000013025)	SNX25 (ENSUMAG00000013032)	CFAP97 (ENSUMAG00000013044)	SLC25A4 (ENSUMAG00000013049)	ENSUMAG00000013055	ENSUMAG00000013062	ACSL1 (ENSUMAG00000013147)	CENPU (ENSUMAG00000013733)	PRIMPOL (ENSUMAG00000013748)	CASP3 (ENSUMAG00000013752)	ENSUMAG00000013760	IRF2 (ENSUMAG00000013766) #22	ENPP6 (ENSUMAG00000013770) #23	STOX2 (ENSUMAG00000013774) #24
Giant Panda	MODERN SPECIES	9	ENSAMEG00000005260	C4orf47 (ENSAMEG00000005269)	UFSP2 (ENSAMEG00000005281)	ENSAMEG00000005304	LRP2BP (ENSAMEG00000005311)	SNX25 (ENSAMEG00000005326)	CFAP97 (ENSAMEG00000008759)	SLC25A4 (ENSAMEG00000008743)	HELT (ENSAMEG00000030990)	ENSAMEG00000030230	ACSL1 (ENSAMEG00000008506)	CENPU (ENSAMEG00000008494)	PRIMPOL (ENSAMEG00000008468)	CASP3 (ENSAMEG00000008419)	ENSAMEG00000026874	IRF2 (ENSAMEG00000008380) #22	ENPP6 (ENSAMEG00000008369) #23	STOX2 (ENSAMEG00000008361) #24	TRAPPC11 (ENSAMEG00000008280) #25	RWDD4 (ENSAMEG00000008268) #26	ING2 (ENSAMEG00000008264) #28	ENSAMEG00000008262	CDKN2AIP (ENSAMEG00000008216) #30	ENSAMEG00000031514	ENSAMEG00000019395	WWC2 (ENSAMEG00000008133) #31	ENSAMEG00000019360	DCTD (ENSAMEG00000028421) #32	ENSAMEG00000007878	TENM3 (ENSAMEG00000007908) #34	ENSAMEG00000030313
Mustelinae	ANCESTRAL SPECIES	84	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154037.C.f	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00940000171084	ENSGT01030000234566.e.b.a.a #34
Ferret	MODERN SPECIES	221	ENSMPUG00000011213	C4orf47 (ENSMPUG00000011207)	UFSP2 (ENSMPUG00000011199)	ANKRD37 (ENSMPUG00000011195)	LRP2BP (ENSMPUG00000011166)	SNX25 (ENSMPUG00000011158)	CFAP97 (ENSMPUG00000011148)	SLC25A4 (ENSMPUG00000011147)	HELT (ENSMPUG00000011138)	ENSMPUG00000011119	ACSL1 (ENSMPUG00000011108)	CENPU (ENSMPUG00000011102)	PRIMPOL (ENSMPUG00000011092)	CASP3 (ENSMPUG00000011084)	ENSMPUG00000011080	IRF2 (ENSMPUG00000011075) #22	ENPP6 (ENSMPUG00000011072) #23	STOX2 (ENSMPUG00000011066) #24	TRAPPC11 (ENSMPUG00000011056) #25	RWDD4 (ENSMPUG00000011048) #26	ING2 (ENSMPUG00000011044) #28	CDKN2AIP (ENSMPUG00000011042) #30	ENSMPUG00000019943	ENSMPUG00000019942	WWC2 (ENSMPUG00000011033) #31	ENSMPUG00000011025	DCTD (ENSMPUG00000011016) #32	ENSMPUG00000011004	TENM3 (ENSMPUG00000010987) #34	ENSMPUG00000010979
American mink	MODERN SPECIES	30	PDLI3 (ENSNVIG00000005921)	ENSNVIG00000005900	CD047 (ENSNVIG00000005884)	UFSP2 (ENSNVIG00000005849)	ANKRD37 (ENSNVIG00000005829)	LRP2BP (ENSNVIG00000005813)	SNX25 (ENSNVIG00000005666)	CFAP97 (ENSNVIG00000005653)	SLC25A4 (ENSNVIG00000005642)	HELT (ENSNVIG00000005628)	ENSNVIG00000005622	ACSL1 (ENSNVIG00000005210)	CENPU (ENSNVIG00000005169)	PRIMPOL (ENSNVIG00000005096)	CASP3 (ENSNVIG00000005055)	IRF2 (ENSNVIG00000005024) #22	ENPP6 (ENSNVIG00000005010) #23	STOX2 (ENSNVIG00000004997) #24	TRAPPC11 (ENSNVIG00000004798) #25	RWDD4 (ENSNVIG00000004735) #26	ING2 (ENSNVIG00000004724) #28	CDKN2AIP (ENSNVIG00000004709) #30	ENSNVIG00000004704	ENSNVIG00000004693	WWC2 (ENSNVIG00000004645) #31	DCTD (ENSNVIG00000004613) #32	ENSNVIG00000004609	TENM3 (ENSNVIG00000004576) #34	ENSNVIG00000004562
Canidae	ANCESTRAL SPECIES	53	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00940000171084	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00530000065303.l	ENSGT00950000183045.C
Canis_lupus	ANCESTRAL SPECIES	29	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545.o #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00940000171084	ENSGT01030000234566.e.b.a.a #34	ENSGT00530000065303.l	ENSGT00950000183045.C	ENSGT00940000153230.A
Dog	MODERN SPECIES	7	SORBS2 (ENSCAFG00845020043)	PDLIM3 (ENSCAFG00845021187)	ENSCAFG00845021472	C16H4orf47 (ENSCAFG00845021602)	UFSP2 (ENSCAFG00845021793)	ENSCAFG00845022036	LRP2BP (ENSCAFG00845022103)	SNX25 (ENSCAFG00845022259)	CFAP97 (ENSCAFG00845022800)	SLC25A4 (ENSCAFG00845022881)	HELT (ENSCAFG00845022921)	ACSL1 (ENSCAFG00845023265)	CENPU (ENSCAFG00845014959)	PRIMPOL (ENSCAFG00845015139)	CASP3 (ENSCAFG00845015288)	IRF2 (ENSCAFG00845015393) #22	ENPP6 (ENSCAFG00845015469) #23	STOX2 (ENSCAFG00845015568) #24	TRAPPC11 (ENSCAFG00845015913) #25	RWDD4 (ENSCAFG00845016321) #26	ING2 (ENSCAFG00845016404) #28	CDKN2AIP (ENSCAFG00845016463) #30	CLDN24 (ENSCAFG00845016547)	ENSCAFG00845016592	WWC2 (ENSCAFG00845016816) #31	DCTD (ENSCAFG00845017237) #32	ENSCAFG00845017499	TENM3 (ENSCAFG00845017689) #34	ENSCAFG00845018229	ENSCAFG00845018256	AGA (ENSCAFG00845018294)
Dingo	MODERN SPECIES	73	ENSCAFG00020000959	C4orf47 (ENSCAFG00020000984)	UFSP2 (ENSCAFG00020000992)	ANKRD37 (ENSCAFG00020001012)	LRP2BP (ENSCAFG00020001025)	SNX25 (ENSCAFG00020001133)	CFAP97 (ENSCAFG00020001848)	SLC25A4 (ENSCAFG00020001854)	HELT (ENSCAFG00020001861)	ENSCAFG00020001869	ENSCAFG00020001873	ACSL1 (ENSCAFG00020001881)	CENPU (ENSCAFG00020001909)	PRIMPOL (ENSCAFG00020001918)	CASP3 (ENSCAFG00020001926)	IRF2 (ENSCAFG00020001931) #22	ENPP6 (ENSCAFG00020001941) #23	STOX2 (ENSCAFG00020001963) #24	TRAPPC11 (ENSCAFG00020001993) #25	ENSCAFG00020002212 #26	ING2 (ENSCAFG00020002237) #28	CDKN2AIP (ENSCAFG00020002238) #30	ENSCAFG00020002243	ENSCAFG00020002247	WWC2 (ENSCAFG00020002263) #31	DCTD (ENSCAFG00020002572) #32	ENSCAFG00020002597	TENM3 (ENSCAFG00020002607) #34	ENSCAFG00020002720
Red fox	MODERN SPECIES	149	ENSVVUG00000012827	CUNH4orf47 (ENSVVUG00000012844)	UFSP2 (ENSVVUG00000012849)	ENSVVUG00000012851	LRP2BP (ENSVVUG00000012854)	SNX25 (ENSVVUG00000012863)	CFAP97 (ENSVVUG00000012919)	SLC25A4 (ENSVVUG00000012924)	HELT (ENSVVUG00000012937)	ENSVVUG00000012943	ACSL1 (ENSVVUG00000012948)	CENPU (ENSVVUG00000013000)	PRIMPOL (ENSVVUG00000013012)	CASP3 (ENSVVUG00000013027)	ENSVVUG00000013039	IRF2 (ENSVVUG00000013048) #22	ENPP6 (ENSVVUG00000013058) #23	ENSVVUG00000013067	STOX2 (ENSVVUG00000013098) #24	TRAPPC11 (ENSVVUG00000013132) #25	RWDD4 (ENSVVUG00000013184) #26	ING2 (ENSVVUG00000013195) #28	CDKN2AIP (ENSVVUG00000013201) #30	ENSVVUG00000013237	WWC2 (ENSVVUG00000013243) #31
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545.m #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.i	ENSGT00940000162234.j	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000155186.r	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545.m #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.i	ENSGT00940000162234.j	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Tiger	MODERN SPECIES	118																IRF2 (ENSPTIG00000006758) #22	ENPP6 (ENSPTIG00000006942) #23	STOX2 (ENSPTIG00000007032) #24	TRAPPC11 (ENSPTIG00000007311) #25
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000155186.r	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545.m #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.i	ENSGT00940000162234.j	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
leopard	MODERN SPECIES	90	ENSPPRG00000024173	ENSPPRG00000024214	C4orf47 (ENSPPRG00000024313)	UFSP2 (ENSPPRG00000024325)	ANKRD37 (ENSPPRG00000024337)	LRP2BP (ENSPPRG00000024361)	SNX25 (ENSPPRG00000024479)	CFAP97 (ENSPPRG00000024545)	SLC25A4 (ENSPPRG00000022414)	HELT (ENSPPRG00000022396)	ACSL1 (ENSPPRG00000022163)	CENPU (ENSPPRG00000018742)	PRIMPOL (ENSPPRG00000018254)	ENSPPRG00000015036	CASP3 (ENSPPRG00000014967)	IRF2 (ENSPPRG00000014690) #22	ENPP6 (ENSPPRG00000014678) #23	STOX2 (ENSPPRG00000013108) #24	TRAPPC11 (ENSPPRG00000013060) #25	ENSPPRG00000012348 #26	ING2 (ENSPPRG00000012156) #28	CDKN2AIP (ENSPPRG00000012146) #30	ENSPPRG00000020276	ENSPPRG00000020260	WWC2 (ENSPPRG00000012093) #31	DCTD (ENSPPRG00000011092) #32	ENSPPRG00000020057	TENM3 (ENSPPRG00000010922) #34	ENSPPRG00000010634
lion	MODERN SPECIES	4	PDLIM3 (ENSPLOG00000016433)	ENSPLOG00000016220	C4orf47 (ENSPLOG00000016128)	UFSP2 (ENSPLOG00000016024)	ANKRD37 (ENSPLOG00000015977)	LRP2BP (ENSPLOG00000015855)	SNX25 (ENSPLOG00000015465)	CFAP97 (ENSPLOG00000015379)	SLC25A4 (ENSPLOG00000015336)	HELT (ENSPLOG00000015248)	ENSPLOG00000015185	ACSL1 (ENSPLOG00000014911)	ENSPLOG00000014746	PRIMPOL (ENSPLOG00000014656)	CASP3 (ENSPLOG00000014571)	IRF2 (ENSPLOG00000014506) #22	ENPP6 (ENSPLOG00000014451) #23	STOX2 (ENSPLOG00000014268) #24	TRAPPC11 (ENSPLOG00000014085) #25	RWDD4 (ENSPLOG00000013987) #26	ING2 (ENSPLOG00000013944) #28	CDKN2AIP (ENSPLOG00000013842) #30	ENSPLOG00000013818	WWC2 (ENSPLOG00000013387) #31	DCTD (ENSPLOG00000013305) #32	TENM3 (ENSPLOG00000013094) #34	ENSPLOG00000013048	ENSPLOG00000013024	AGA (ENSPLOG00000012952)	NEIL3 (ENSPLOG00000012822)	VEGFC (ENSPLOG00000012772)
Cat	MODERN SPECIES	235	CCDC110 (ENSFCAG00000028809)	CB1H4orf47 (ENSFCAG00000031930)	UFSP2 (ENSFCAG00000025060)	ANKRD37 (ENSFCAG00000027472)	LRP2BP (ENSFCAG00000004805)	SNX25 (ENSFCAG00000004803)	CFAP97 (ENSFCAG00000024414)	SLC25A4 (ENSFCAG00000037539)	HELT (ENSFCAG00000025140)	ENSFCAG00000026009	CENPU (ENSFCAG00000005075)	ENSFCAG00000052999	ACSL1 (ENSFCAG00000005085)	PRIMPOL (ENSFCAG00000027833)	CASP3 (ENSFCAG00000025408)	IRF2 (ENSFCAG00000030144) #22	ENPP6 (ENSFCAG00000001574) #23	STOX2 (ENSFCAG00000014995) #24	TRAPPC11 (ENSFCAG00000030217) #25	RWDD4 (ENSFCAG00000024337) #26	ING2 (ENSFCAG00000028949) #28	CDKN2AIP (ENSFCAG00000026739) #30	ENSFCAG00000042436	ENSFCAG00000042875	WWC2 (ENSFCAG00000003067) #31	DCTD (ENSFCAG00000044388) #32	TENM3 (ENSFCAG00000022648) #34	ENSFCAG00000042450	AGA (ENSFCAG00000022643)	NEIL3 (ENSFCAG00000004956)	VEGFC (ENSFCAG00000007996)
Laurasiatheria_c	ANCESTRAL SPECIES	26	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Equus	ANCESTRAL SPECIES	28	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000169716	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Donkey	MODERN SPECIES	19	ENSEASG00005018363	C4orf47 (ENSEASG00005018367)	UFSP2 (ENSEASG00005018372)	ENSEASG00005018376	LRP2BP (ENSEASG00005018380)	SNX25 (ENSEASG00005018384)	CFAP97 (ENSEASG00005018387)	SLC25A4 (ENSEASG00005018390)	HELT (ENSEASG00005035137)	ACSL1 (ENSEASG00005018398)	CENPU (ENSEASG00005018407)	PRIMPOL (ENSEASG00005018412)	CASP3 (ENSEASG00005018416)	ENSEASG00005018419	ENSEASG00005018420	IRF2 (ENSEASG00005018423) #22	ENSEASG00005025603	ENPP6 (ENSEASG00005018425) #23	STOX2 (ENSEASG00005018429) #24	TRAPPC11 (ENSEASG00005018432) #25	RWDD4 (ENSEASG00005018438) #26	ING2 (ENSEASG00005034685) #28	CDKN2AIP (ENSEASG00005018444) #30	ENSEASG00005035036	WWC2 (ENSEASG00005018450) #31	ENSEASG00005024583 #32	TENM3 (ENSEASG00005018486) #34	ENSEASG00005018558 ##34	AGA (ENSEASG00005022270)	NEIL3 (ENSEASG00005022272)	VEGFC (ENSEASG00005022274)
Horse	MODERN SPECIES	19	C27H4orf47 (ENSECAG00000052089)	PDLIM3 (ENSECAG00000017896)	CCDC110 (ENSECAG00000000205)	UFSP2 (ENSECAG00000009486)	ANKRD37 (ENSECAG00000010858)	SNX25 (ENSECAG00000014326)	LRP2BP (ENSECAG00000010868)	CFAP97 (ENSECAG00000019778)	SLC25A4 (ENSECAG00000020944)	HELT (ENSECAG00000008629)	ACSL1 (ENSECAG00000008679)	CENPU (ENSECAG00000016722)	PRIMPOL (ENSECAG00000020522)	CASP3 (ENSECAG00000022197)	ENSECAG00000028316	IRF2 (ENSECAG00000007508) #22	ENPP6 (ENSECAG00000011627) #23	STOX2 (ENSECAG00000012786) #24	ENSECAG00000036009	TRAPPC11 (ENSECAG00000015348) #25	RWDD4 (ENSECAG00000011336) #26	ING2 (ENSECAG00000015406) #28	CDKN2AIP (ENSECAG00000015905) #30	ENSECAG00000017161	ENSECAG00000006075	WWC2 (ENSECAG00000017226) #31	DCTD (ENSECAG00000017516) #32	TENM3 (ENSECAG00000020433) #34	ENSECAG00000051167 #34	AGA (ENSECAG00000000085)	NEIL3 (ENSECAG00000009121)
Chiroptera	ANCESTRAL SPECIES	32	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Megabat	MODERN SPECIES	2604																IRF2 (ENSPVAG00000007078) #22
Microchiroptera	ANCESTRAL SPECIES	33	ENSGT00940000157056	ENSGT00940000156741	ENSGT01100000263660	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Greater horseshoe bat	MODERN SPECIES	22	SORBS2 (ENSRFEG00010013758)	PDLIM3 (ENSRFEG00010014254)	ENSRFEG00010014396	ENSRFEG00010014599	C4orf47 (ENSRFEG00010014615)	SNX25 (ENSRFEG00010014703)	UFSP2 (ENSRFEG00010015247)	LRP2BP (ENSRFEG00010015317)	CFAP97 (ENSRFEG00010015438)	SLC25A4 (ENSRFEG00010015491)	HELT (ENSRFEG00010015716)	ACSL1 (ENSRFEG00010015807)	CENPU (ENSRFEG00010016006)	PRIMPOL (ENSRFEG00010016194)	CASP3 (ENSRFEG00010016238)	IRF2 (ENSRFEG00010016324) #22	ENPP6 (ENSRFEG00010016393) #23	STOX2 (ENSRFEG00010016438) #24	TRAPPC11 (ENSRFEG00010016462) #25	RWDD4 (ENSRFEG00010016789) #26	ING2 (ENSRFEG00010016836) #28	CDKN2AIP (ENSRFEG00010016870) #30	ENSRFEG00010016958	ENSRFEG00010016974	WWC2 (ENSRFEG00010016991) #31	ENSRFEG00010017067	DCTD (ENSRFEG00010017093) #32	ENSRFEG00010017163	TENM3 (ENSRFEG00010017187) #34	ENSRFEG00010017266	AGA (ENSRFEG00010017284)
Microbat	MODERN SPECIES	1039	SORBS2 (ENSMLUG00000014357)	PDLIM3 (ENSMLUG00000014354)	ENSMLUG00000027378	C4orf47 (ENSMLUG00000006074)	UFSP2 (ENSMLUG00000006064)	ANKRD37 (ENSMLUG00000006061)	LRP2BP (ENSMLUG00000006054)	SNX25 (ENSMLUG00000006047)	CFAP97 (ENSMLUG00000000510)	SLC25A4 (ENSMLUG00000003712)	HELT (ENSMLUG00000004406)	ENSMLUG00000006341	CENPU (ENSMLUG00000016652)	PRIMPOL (ENSMLUG00000016637)	CASP3 (ENSMLUG00000002451)	IRF2 (ENSMLUG00000014246) #22	ENPP6 (ENSMLUG00000004841) #23	STOX2 (ENSMLUG00000024441) #24
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159063 #22
Hedgehog	MODERN SPECIES	6332																IRF2 (ENSEEUG00000004690) #22
Common shrew	MODERN SPECIES	4927																IRF2 (ENSSARG00000003964) #22
Atlantogenata	ANCESTRAL SPECIES	84													ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Afrotheria	ANCESTRAL SPECIES	92													ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Tenrec	MODERN SPECIES	6148																IRF2 (ENSETEG00000003181) #22
Afrotheria_a	ANCESTRAL SPECIES	95													ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Elephant	MODERN SPECIES	355													ENSLAFG00000021902	PRIMPOL (ENSLAFG00000013253)	CASP3 (ENSLAFG00000010657)	IRF2 (ENSLAFG00000000088) #22	ENPP6 (ENSLAFG00000012099) #23	STOX2 (ENSLAFG00000012095) #24	TRAPPC11 (ENSLAFG00000003032) #25	ENSLAFG00000003031 #26	ING2 (ENSLAFG00000014542) #28	CDKN2AIP (ENSLAFG00000009239) #30	ENSLAFG00000007256	ENSLAFG00000007255	WWC2 (ENSLAFG00000007253) #31	DCTD (ENSLAFG00000018439) #32	ENSLAFG00000015906 #34	ENSLAFG00000029165 #34	AGA (ENSLAFG00000005742)	NEIL3 (ENSLAFG00000014165)	VEGFC (ENSLAFG00000009460)
Xenarthra	ANCESTRAL SPECIES	236													ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34
Sloth	MODERN SPECIES	5624																IRF2 (ENSCHOG00000012067) #22
Armadillo	MODERN SPECIES	4320												ENSDNOG00000006803	PRIMPOL (ENSDNOG00000006785)	CASP3 (ENSDNOG00000013931)	ENSDNOG00000043542	IRF2 (ENSDNOG00000048203) #22	ENSDNOG00000047773	ENPP6 (ENSDNOG00000044618) #23	STOX2 (ENSDNOG00000035487) #24	ENSDNOG00000047151	TRAPPC11 (ENSDNOG00000015134) #25	RWDD4 (ENSDNOG00000015132) #26	ING2 (ENSDNOG00000003916) #28	CDKN2AIP (ENSDNOG00000046935) #30	ENSDNOG00000017259	ENSDNOG00000017257	WWC2 (ENSDNOG00000017252) #31	DCTD (ENSDNOG00000000721) #32	TENM3 (ENSDNOG00000002206) #34
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000014316.c.b.`b	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.a	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000014316.c.b.`b	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.a	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Diprotodontia	ANCESTRAL SPECIES	43	ENSGT00940000157056	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000014316.c.b.`b	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.a	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Diprotodontia_a	ANCESTRAL SPECIES	38	ENSGT00940000156741	ENSGT01040000240547	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b.e	ENSGT00940000153232.a.b.f	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000014316.c.b.`b	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234.a	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Common wonbat	MODERN SPECIES	1057	TLR3 (ENSVURG00010006531)	SORBS2 (ENSVURG00010006578)	ENSVURG00010006675	ENSVURG00010006686	C4orf47 (ENSVURG00010006704)	UFSP2 (ENSVURG00010006716)	ANKRD37 (ENSVURG00010006735)	LRP2BP (ENSVURG00010006748)	SNX25 (ENSVURG00010006768)	CFAP97 (ENSVURG00010006807)	SLC25A4 (ENSVURG00010006814)	HELT (ENSVURG00010006821)	ACSL1 (ENSVURG00010006848)	ENSVURG00010006883	ENSVURG00010006898	IRF2 (ENSVURG00010006908) #22	ENPP6 (ENSVURG00010006917) #23	STOX2 (ENSVURG00010006945) #24	TRAPPC11 (ENSVURG00010006961) #25	RWDD4 (ENSVURG00010006994) #26	ENSVURG00010007020 #28	CDKN2AIP (ENSVURG00010007029) #30	WWC2 (ENSVURG00010007055) #31	ENSVURG00010007081	ENSVURG00010007086	ENSVURG00010007087	DCTD (ENSVURG00010007106) #32	TENM3 (ENSVURG00010007150) #34	ENSVURG00010007201	ENSVURG00010007209	ENSVURG00010007226
koala	MODERN SPECIES	123	ENSPCIG00000037268	C4orf47 (ENSPCIG00000004049)	UFSP2 (ENSPCIG00000025038)	ANKRD37 (ENSPCIG00000025037)	LRP2BP (ENSPCIG00000025036)	ENSPCIG00000030704	ENSPCIG00000007576	CFAP97 (ENSPCIG00000013442)	SLC25A4 (ENSPCIG00000032887)	HELT (ENSPCIG00000025033)	ACSL1 (ENSPCIG00000025030)	ENSPCIG00000025028	PRIMPOL (ENSPCIG00000025027)	ENSPCIG00000034000	ENSPCIG00000032808	IRF2 (ENSPCIG00000021142) #22	ENPP6 (ENSPCIG00000031713) #23	STOX2 (ENSPCIG00000010837) #24	TRAPPC11 (ENSPCIG00000010834) #25	ENSPCIG00000010836	RWDD4 (ENSPCIG00000010832) #26	ING2 (ENSPCIG00000010828) #28	CDKN2AIP (ENSPCIG00000010826) #30	ENSPCIG00000013384	WWC2 (ENSPCIG00000010902) #31	DCTD (ENSPCIG00000013744) #32	ENSPCIG00000013700 #34	ENSPCIG00000013679 #34	ENSPCIG00000016947	ENSPCIG00000032523
Wallaby	MODERN SPECIES	7629																IRF2 (ENSMEUG00000003128) #22
Tasmanian devil	MODERN SPECIES	5	PDLIM3 (ENSSHAG00000012258)	ENSSHAG00000012622	C4orf47 (ENSSHAG00000012768)	ANKRD37 (ENSSHAG00000025335)	UFSP2 (ENSSHAG00000026246)	LRP2BP (ENSSHAG00000026041)	SNX25 (ENSSHAG00000013443)	CFAP97 (ENSSHAG00000031623)	SLC25A4 (ENSSHAG00000020831)	HELT (ENSSHAG00000004636)	ENSSHAG00000030602	ACSL1 (ENSSHAG00000007860)	ENSSHAG00000032064	PRIMPOL (ENSSHAG00000008875)	ENSSHAG00000027604	IRF2 (ENSSHAG00000025211) #22	ENPP6 (ENSSHAG00000024436) #23	STOX2 (ENSSHAG00000009529) #24	TRAPPC11 (ENSSHAG00000001108) #25	RWDD4 (ENSSHAG00000025756) #26	ING2 (ENSSHAG00000025479) #28	CDKN2AIP (ENSSHAG00000031412) #30	ENSSHAG00000013799	ENSSHAG00000013806	WWC2 (ENSSHAG00000013834) #31	ENSSHAG00000027006 #32	TENM3 (ENSSHAG00000015658) #34	ENSSHAG00000028695	ENSSHAG00000018103	ENSSHAG00000021250	AGA (ENSSHAG00000006591)
Opossum	MODERN SPECIES	4	ENSMODG00000004762	C4orf47 (ENSMODG00000004751)	UFSP2 (ENSMODG00000004727)	ANKRD37 (ENSMODG00000004702)	LRP2BP (ENSMODG00000004698)	ENSMODG00000046948	SNX25 (ENSMODG00000004684)	CFAP97 (ENSMODG00000004647)	SLC25A4 (ENSMODG00000004639)	HELT (ENSMODG00000004628)	ACSL1 (ENSMODG00000004620)	ENSMODG00000004536	PRIMPOL (ENSMODG00000004526)	CASP3 (ENSMODG00000004473)	ENSMODG00000051240	IRF2 (ENSMODG00000004393) #22	ENPP6 (ENSMODG00000004339) #23	ENSMODG00000029566	STOX2 (ENSMODG00000004310) #24	ENSMODG00000051244	TRAPPC11 (ENSMODG00000004292) #25	ENSMODG00000025078	RWDD4 (ENSMODG00000004223) #26	ENSMODG00000047937	ING2 (ENSMODG00000004200) #28	CDKN2AIP (ENSMODG00000004192) #30	ENSMODG00000025075	ENSMODG00000025074	WWC2 (ENSMODG00000004171) #31	DCTD (ENSMODG00000004124) #32	TENM3 (ENSMODG00000004107) #34
Platypus	MODERN SPECIES	3	TLR3 (ENSOANG00000004937)	SORBS2 (ENSOANG00000046049)	PDLIM3 (ENSOANG00000013438)	ENSOANG00000007705	C4orf47 (ENSOANG00000003387)	UFSP2 (ENSOANG00000004307)	ENSOANG00000050648	SNX25 (ENSOANG00000012290)	ENSOANG00000002173	SLC25A4 (ENSOANG00000051146)	HELT (ENSOANG00000036820)	ACSL1 (ENSOANG00000010805)	ENSOANG00000036013	PRIMPOL (ENSOANG00000008783)	CASP3 (ENSOANG00000039253)	IRF2 (ENSOANG00000039047) #22	ENPP6 (ENSOANG00000009958) #23	ENSOANG00000047270 #24	TRAPPC11 (ENSOANG00000000393) #25	ENSOANG00000006299 #26	ING2 (ENSOANG00000050786) #28	ENSOANG00000048439 #30	ENSOANG00000041602	ENSOANG00000048730	DCTD (ENSOANG00000049130) #32	TENM3 (ENSOANG00000013681) #34	AGA (ENSOANG00000040053)	VEGFC (ENSOANG00000015685)	SPCS3 (ENSOANG00000015686)	ASB5 (ENSOANG00000041691)	ENSOANG00000045846
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Toxicofera	ANCESTRAL SPECIES	21	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Elapidae	ANCESTRAL SPECIES	11	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021.a	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b.w.a #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Elapidae_a	ANCESTRAL SPECIES	13	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980.g	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550.b #25	ENSGT00390000006550.a #25	ENSGT00390000015545 #26	ENSGT00940000167021.a	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b.w.a #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00940000156167.b	ENSGT00390000009223
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980.g	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550.b #25	ENSGT00390000006550.a #25	ENSGT00390000015545 #26	ENSGT00940000167021.a	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b.w.a #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00990000212018	ENSGT00950000183045.C
Eastern brown snake	MODERN SPECIES	9	TLR3 (ENSPTXG00000001810)	SORBS2 (ENSPTXG00000001800)	PDLIM3 (ENSPTXG00000001798)	ENSPTXG00000001797	C4orf47 (ENSPTXG00000001796)	UFSP2 (ENSPTXG00000001794)	ANKRD37 (ENSPTXG00000001793)	LRP2BP (ENSPTXG00000001792)	SNX25 (ENSPTXG00000001791)	CFAP97 (ENSPTXG00000001790)	SLC25A4 (ENSPTXG00000001789)	HELT (ENSPTXG00000001788)	ACSL1 (ENSPTXG00000001786)	PRIMPOL (ENSPTXG00000001785)	CASP3 (ENSPTXG00000001784)	IRF2 (ENSPTXG00000001782) #22
Mainland tiger snake	MODERN SPECIES	18	FAM149A (ENSNSUG00000009600)	TLR3 (ENSNSUG00000009601)	SORBS2 (ENSNSUG00000009602)	PDLIM3 (ENSNSUG00000009609)	ENSNSUG00000009610	ANKRD37 (ENSNSUG00000009611)	LRP2BP (ENSNSUG00000009612)	ENSNSUG00000009613	ENSNSUG00000009614	SLC25A4 (ENSNSUG00000009615)	HELT (ENSNSUG00000009616)	ACSL1 (ENSNSUG00000009617)	ENSNSUG00000009618	ENSNSUG00000009619	CASP3 (ENSNSUG00000009620)	IRF2 (ENSNSUG00000009621) #22	ENPP6 (ENSNSUG00000009622) #23	STOX2 (ENSNSUG00000009624) #24	TRAPPC11 (ENSNSUG00000009636) #25	RWDD4 (ENSNSUG00000009648) #26	ING2 (ENSNSUG00000009662) #28	CDKN2AIP (ENSNSUG00000009664) #30	ENSNSUG00000009665	ENSNSUG00000009666 #31	ENSNSUG00000009667 #31	ENSNSUG00000009668 #31	ENSNSUG00000009669 #31	DCTD (ENSNSUG00000009670) #32	ENSNSUG00000009671	TENM3 (ENSNSUG00000009672) #34	ENSNSUG00000009674
Blue-lipped sea krait	MODERN SPECIES	305														PRIMPOL (ENSLLTG00000009417)	CASP3 (ENSLLTG00000009397)	IRF2 (ENSLLTG00000009377) #22
Indian cobra	MODERN SPECIES	3	FAM149A (ENSNNAG00000008218)	TLR3 (ENSNNAG00000008314)	SORBS2 (ENSNNAG00000008357)	PDLIM3 (ENSNNAG00000008417)	C4orf47 (ENSNNAG00000008489)	UFSP2 (ENSNNAG00000008531)	ANKRD37 (ENSNNAG00000008640)	LRP2BP (ENSNNAG00000008708)	SNX25 (ENSNNAG00000008912)	CFAP97 (ENSNNAG00000011733)	SLC25A4 (ENSNNAG00000011745)	HELT (ENSNNAG00000011765)	ACSL1 (ENSNNAG00000011797)	ENSNNAG00000011889	PRIMPOL (ENSNNAG00000011991)	IRF2 (ENSNNAG00000012082) #22	ENPP6 (ENSNNAG00000012210) #23	STOX2 (ENSNNAG00000012240) #24	TRAPPC11 (ENSNNAG00000012275) #25	RWDD4 (ENSNNAG00000012437) #26	ENSNNAG00000012459	ING2 (ENSNNAG00000012523) #28	ENSNNAG00000007511 #30	ENSNNAG00000007529	WWC2 (ENSNNAG00000007564) #31	DCTD (ENSNNAG00000007729) #32	TENM3 (ENSNNAG00000007811) #34	AGA (ENSNNAG00000007902)	NEIL3 (ENSNNAG00000007929)	VEGFC (ENSNNAG00000007968)	SPCS3 (ENSNNAG00000008000)
Lizard	MODERN SPECIES	4	ENSACAG00000002096	C4orf47 (ENSACAG00000002100)	UFSP2 (ENSACAG00000002110)	ANKRD37 (ENSACAG00000029319)	LRP2BP (ENSACAG00000002192)	SNX25 (ENSACAG00000002232)	CFAP97 (ENSACAG00000002345)	SLC25A4 (ENSACAG00000002352)	HELT (ENSACAG00000002389)	ENSACAG00000044908	ACSL1 (ENSACAG00000002400)	ENSACAG00000002694	PRIMPOL (ENSACAG00000002700)	ENSACAG00000029025	CASP3 (ENSACAG00000041972)	IRF2 (ENSACAG00000002786) #22	ENPP6 (ENSACAG00000002953) #23	STOX2 (ENSACAG00000003010) #24	ENSACAG00000040419	TRAPPC11 (ENSACAG00000003035) #25	RWDD4 (ENSACAG00000038420) #26	ENSACAG00000043283	ING2 (ENSACAG00000006973) #28	ENSACAG00000006976 #30	ENSACAG00000042349 #30	ENSACAG00000021129	WWC2 (ENSACAG00000006981) #31	ENSACAG00000013740 #34	ENSACAG00000038458	ENSACAG00000039500	ENSACAG00000044462
Laterata	ANCESTRAL SPECIES	9	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	17	SORBS2 (ENSPMRG00000009395)	PDLIM3 (ENSPMRG00000009433)	ENSPMRG00000009440	C4orf47 (ENSPMRG00000009472)	UFSP2 (ENSPMRG00000009482)	ANKRD37 (ENSPMRG00000009502)	LRP2BP (ENSPMRG00000009520)	SNX25 (ENSPMRG00000009599)	CFAP97 (ENSPMRG00000009616)	SLC25A4 (ENSPMRG00000009623)	HELT (ENSPMRG00000009628)	ACSL1 (ENSPMRG00000009636)	ENSPMRG00000009652	PRIMPOL (ENSPMRG00000009678)	CASP3 (ENSPMRG00000009766)	ENSPMRG00000009773 #22	ENPP6 (ENSPMRG00000009792) #23	STOX2 (ENSPMRG00000009808) #24	TRAPPC11 (ENSPMRG00000009825) #25	RWDD4 (ENSPMRG00000009881) #26	ENSPMRG00000009896	ING2 (ENSPMRG00000009899) #28	ENSPMRG00000009905 #30	ENSPMRG00000009910 #30	ENSPMRG00000009913	WWC2 (ENSPMRG00000009963) #31	DCTD (ENSPMRG00000010175) #32	ENSPMRG00000010196 #34	ENSPMRG00000010294 #34	ENSPMRG00000010303 #34	ENSPMRG00000010312
Common wall lizard	MODERN SPECIES	324																ENSPMRG00000019326 #22
Argentine black and white tegu	MODERN SPECIES	26	SORBS2 (ENSSMRG00000009724)	PDLIM3 (ENSSMRG00000009723)	ENSSMRG00000009722	C4orf47 (ENSSMRG00000009721)	UFSP2 (ENSSMRG00000009713)	ANKRD37 (ENSSMRG00000009712)	LRP2BP (ENSSMRG00000009711)	SNX25 (ENSSMRG00000009706)	CFAP97 (ENSSMRG00000009703)	SLC25A4 (ENSSMRG00000009702)	HELT (ENSSMRG00000009701)	ACSL1 (ENSSMRG00000009700)	ENSSMRG00000009695	PRIMPOL (ENSSMRG00000009682)	CASP3 (ENSSMRG00000009681)	IRF2 (ENSSMRG00000009680) #22	ENSSMRG00000009674	ENPP6 (ENSSMRG00000009673) #23	STOX2 (ENSSMRG00000009671) #24	TRAPPC11 (ENSSMRG00000009617) #25	RWDD4 (ENSSMRG00000009615) #26	ENSSMRG00000009614	ING2 (ENSSMRG00000009613) #28	ENSSMRG00000009609 #30	ENSSMRG00000009607	WWC2 (ENSSMRG00000009600) #31	DCTD (ENSSMRG00000009584) #32	ENSSMRG00000009575	TENM3 (ENSSMRG00000009568) #34	ENSSMRG00000009539	AGA (ENSSMRG00000009489)
tuatara	MODERN SPECIES	227	SORBS2 (ENSSPUG00000015221)	PDLIM3 (ENSSPUG00000015117)	C4orf47 (ENSSPUG00000015105)	UFSP2 (ENSSPUG00000015065)	ANKRD37 (ENSSPUG00000015054)	LRP2BP (ENSSPUG00000015018)	SNX25 (ENSSPUG00000014955)	CFAP97 (ENSSPUG00000014939)	SLC25A4 (ENSSPUG00000014925)	HELT (ENSSPUG00000014899)	ACSL1 (ENSSPUG00000014786)	ENSSPUG00000014754	PRIMPOL (ENSSPUG00000014738)	ENSSPUG00000014732	CASP3 (ENSSPUG00000014725)	IRF2 (ENSSPUG00000014707) #22	ENPP6 (ENSSPUG00000014690) #23	STOX2 (ENSSPUG00000014669) #24	TRAPPC11 (ENSSPUG00000014645) #25	ENSSPUG00000014637 #26	ING2 (ENSSPUG00000014633) #28	ENSSPUG00000014619 #30
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000162234	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000162234	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C
Aves	ANCESTRAL SPECIES	3	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000162234	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00950000183088.a.b.b.q	ENSGT00390000017004.a.a	ENSGT00940000160003	ENSGT00940000154108.b.a.a	ENSGT00940000153745.b	ENSGT00940000157115	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000155038
Japanese quail	MODERN SPECIES	22	ARHGEF38 (ENSCJPG00005009579)	PPA2 (ENSCJPG00005009581)	TET2 (ENSCJPG00005009585)	CXXC4 (ENSCJPG00005009588)	TACR3 (ENSCJPG00005009592)	UFSP2 (ENSCJPG00005009595)	LRP2BP (ENSCJPG00005009596)	SNX25 (ENSCJPG00005009597)	CFAP97 (ENSCJPG00005009598)	SLC25A4 (ENSCJPG00005009599)	HELT (ENSCJPG00005009600)	ACSL1 (ENSCJPG00005009601)	CENPU (ENSCJPG00005009602)	PRIMPOL (ENSCJPG00005009603)	CASP3 (ENSCJPG00005009604)	IRF2 (ENSCJPG00005009605) #22	ENPP6 (ENSCJPG00005009606) #23	STOX2 (ENSCJPG00005009607) #24	TRAPPC11 (ENSCJPG00005009608) #25	RWDD4 (ENSCJPG00005009609) #26	ING2 (ENSCJPG00005009611) #28	CDKN2AIP (ENSCJPG00005009613) #30	ENSCJPG00005009615	WWC2 (ENSCJPG00005009619) #31	DCTD (ENSCJPG00005009621) #32	ENSCJPG00005009622	ENSCJPG00005009627 #34	ENSCJPG00005009875 #34	AGA (ENSCJPG00005009890)	NEIL3 (ENSCJPG00005009892)	GALNTL6 (ENSCJPG00005009911)
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00950000183088.a.b.b.q	ENSGT00390000017004.a.a	ENSGT00940000160003	ENSGT00940000154108.b.a.a	ENSGT00940000153745.b	ENSGT00940000157115	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000155038	ENSGT00940000158105
Turkey	MODERN SPECIES	24	ENSMGAG00000006745	ENSMGAG00000006733	ENSMGAG00000016724 #34	ENSMGAG00000006585 #34	ENSMGAG00000020804 #34	ENSMGAG00000020453 #32	ENSMGAG00000018663	ENSMGAG00000006504 #31	ENSMGAG00000016258	ENSMGAG00000016260	ENSMGAG00000006502 #30	ENSMGAG00000006495 #28	ENSMGAG00000006479 #26	ENSMGAG00000006404 #25	ENSMGAG00000006401 #24	ENSMGAG00000006359 #22	ENSMGAG00000006316	ENSMGAG00000006217	ENSMGAG00000006271	ENSMGAG00000006292	ENSMGAG00000019600	SNX25 (ENSMGAG00000006165)	ENSMGAG00000006201	SLC25A4 (ENSMGAG00000006211)	ENSMGAG00000006126	ENSMGAG00000006149	ENSMGAG00000006108	ENSMGAG00000006097	ENSMGAG00000006061	ENSMGAG00000016688	ENSMGAG00000006026
Chicken	MODERN SPECIES	33	ARHGEF38 (ENSGALG00010006243)	PPA2 (ENSGALG00010006259)	TET2 (ENSGALG00010005756)	CXXC4 (ENSGALG00010005768)	TACR3 (ENSGALG00010005776)	UFSP2 (ENSGALG00010005799)	LRP2BP (ENSGALG00010005826)	SNX25 (ENSGALG00010005849)	CFAP97 (ENSGALG00010005858)	SLC25A4 (ENSGALG00010005880)	HELT (ENSGALG00010006955)	ACSL1 (ENSGALG00010007007)	CENPU (ENSGALG00010007038)	PRIMPOL (ENSGALG00010007085)	CASP3 (ENSGALG00010007067)	IRF2 (ENSGALG00010007130) #22	ENPP6 (ENSGALG00010007187) #23	STOX2 (ENSGALG00010007283) #24	TRAPPC11 (ENSGALG00010007294) #25	RWDD4 (ENSGALG00010007326) #26	ING2 (ENSGALG00010007353) #28	CDKN2AIP (ENSGALG00010007376) #30	ENSGALG00010007394	ENSGALG00010008525	WWC2 (ENSGALG00010007399) #31	DCTD (ENSGALG00010007416) #32	TENM3 (ENSGALG00010007480) #34	AGA (ENSGALG00010004457)	NEIL3 (ENSGALG00010004472)	GALNTL6 (ENSGALG00010002926)	ENSGALG00010002932
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Pink-footed goose	MODERN SPECIES	45	ENSABRG00000020206	C4orf47 (ENSABRG00000020209)	PDLIM3 (ENSABRG00000020215)	ENSABRG00000020218	UFSP2 (ENSABRG00000020220)	ANKRD37 (ENSABRG00000020222)	LRP2BP (ENSABRG00000020223)	SNX25 (ENSABRG00000020226)	CFAP97 (ENSABRG00000020230)	SLC25A4 (ENSABRG00000020232)	HELT (ENSABRG00000020236)	ACSL1 (ENSABRG00000020240)	CENPU (ENSABRG00000020248)	PRIMPOL (ENSABRG00000020253)	CASP3 (ENSABRG00000020256)	IRF2 (ENSABRG00000020262) #22	ENPP6 (ENSABRG00000000157) #23	STOX2 (ENSABRG00000000166) #24	TRAPPC11 (ENSABRG00000000171) #25	RWDD4 (ENSABRG00000000208) #26	ING2 (ENSABRG00000000252) #28	ENSABRG00000000268 #30	ENSABRG00000000285	ENSABRG00000000307	WWC2 (ENSABRG00000000349) #31	DCTD (ENSABRG00000000462) #32	ENSABRG00000000487	TENM3 (ENSABRG00000000542) #34
Duck	MODERN SPECIES	22	SORBS2 (ENSAPLG00000009037)	PDLIM3 (ENSAPLG00000009922)	ENSAPLG00000010388	C4orf47 (ENSAPLG00000010408)	UFSP2 (ENSAPLG00000010608)	ANKRD37 (ENSAPLG00000020390)	LRP2BP (ENSAPLG00000010869)	SNX25 (ENSAPLG00000010977)	CFAP97 (ENSAPLG00000011187)	SLC25A4 (ENSAPLG00000011236)	ACSL1 (ENSAPLG00000010847)	ENSAPLG00000025522	CENPU (ENSAPLG00000014915)	PRIMPOL (ENSAPLG00000015061)	CASP3 (ENSAPLG00000015194)	IRF2 (ENSAPLG00000015442) #22	ENPP6 (ENSAPLG00000015694) #23	STOX2 (ENSAPLG00000015912) #24	TRAPPC11 (ENSAPLG00000015916) #25	RWDD4 (ENSAPLG00000002484) #26	ING2 (ENSAPLG00000000882) #28	CDKN2AIP (ENSAPLG00000016955) #30	ENSAPLG00000000894	WWC2 (ENSAPLG00000002645) #31	EPHA5 (ENSAPLG00000007060)	ENSAPLG00000008578	STAP1 (ENSAPLG00000008926)	UBA6 (ENSAPLG00000009066)	ENSAPLG00000030285	ENSAPLG00000029530	ENSAPLG00000009678
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00940000161922.i.b.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Kakapo	MODERN SPECIES	24	TLR3 (ENSSHBG00005012669)	SORBS2 (ENSSHBG00005012714)	PDLIM3 (ENSSHBG00005012832)	C4orf47 (ENSSHBG00005012849)	UFSP2 (ENSSHBG00005012873)	ANKRD37 (ENSSHBG00005012894)	LRP2BP (ENSSHBG00005012905)	SNX25 (ENSSHBG00005012924)	CFAP97 (ENSSHBG00005012940)	SLC25A4 (ENSSHBG00005012951)	HELT (ENSSHBG00005012957)	ACSL1 (ENSSHBG00005012971)	CENPU (ENSSHBG00005012983)	PRIMPOL (ENSSHBG00005012999)	CASP3 (ENSSHBG00005013019)	IRF2 (ENSSHBG00005013032) #22	ENSSHBG00005013045 #23	ENSSHBG00005013054 #23	STOX2 (ENSSHBG00005013069) #24	ENSSHBG00005013077 #24	TRAPPC11 (ENSSHBG00005013088) #25	RWDD4 (ENSSHBG00005013100) #26	ING2 (ENSSHBG00005013117) #28	CDKN2AIP (ENSSHBG00005013134) #30	ENSSHBG00005013144	WWC2 (ENSSHBG00005013182) #31	DCTD (ENSSHBG00005013251) #32	TENM3 (ENSSHBG00005013307) #34	AGA (ENSSHBG00005013414)	NEIL3 (ENSSHBG00005013429)	ENSSHBG00005013439
Golden eagle	MODERN SPECIES		SORBS2 (ENSACCG00020009833)	ENSACCG00020009894	PDLIM3 (ENSACCG00020009908)	C4orf47 (ENSACCG00020009924)	UFSP2 (ENSACCG00020009934)	ANKRD37 (ENSACCG00020009946)	LRP2BP (ENSACCG00020009961)	SNX25 (ENSACCG00020009988)	CFAP97 (ENSACCG00020010013)	SLC25A4 (ENSACCG00020010021)	HELT (ENSACCG00020010034)	ACSL1 (ENSACCG00020010049)	CENPU (ENSACCG00020010067)	PRIMPOL (ENSACCG00020010094)	CASP3 (ENSACCG00020010115)	IRF2 (ENSACCG00020010129) #22	ENPP6 (ENSACCG00020010158) #23	STOX2 (ENSACCG00020010178) #24	TRAPPC11 (ENSACCG00020010191) #25	RWDD4 (ENSACCG00020010211) #26	ING2 (ENSACCG00020010222) #28	ENSACCG00020010238 #30	ENSACCG00020010248 #30	ENSACCG00020010255	ENSACCG00020010270	WWC2 (ENSACCG00020010330) #31	DCTD (ENSACCG00020010359) #32	TENM3 (ENSACCG00020010429) #34	AGA (ENSACCG00020010484)	NEIL3 (ENSACCG00020010497)	VEGFC (ENSACCG00020010512)
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00530000063727.B	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00530000063727.B	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00530000063727.B	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00530000063727.B	ENSGT00940000159678	ENSGT00940000157056	ENSGT00940000156741	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b.a	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT00910000148572	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Zebra finch	MODERN SPECIES	25	FAM149A (ENSTGUG00000006897)	TLR3 (ENSTGUG00000006891)	SORBS2 (ENSTGUG00000006871)	PDLIM3 (ENSTGUG00000006848)	UFSP2 (ENSTGUG00000006829)	ANKRD37 (ENSTGUG00000006827)	LRP2BP (ENSTGUG00000006810)	SNX25 (ENSTGUG00000006784)	CFAP97 (ENSTGUG00000025785)	SLC25A4 (ENSTGUG00000006757)	ACSL1 (ENSTGUG00000006718)	HELT (ENSTGUG00000006754)	CENPU (ENSTGUG00000006711)	PRIMPOL (ENSTGUG00000006701)	CASP3 (ENSTGUG00000006682)	IRF2 (ENSTGUG00000006662) #22	ENPP6 (ENSTGUG00000006653) #23	STOX2 (ENSTGUG00000006645) #24	TRAPPC11 (ENSTGUG00000006590) #25	RWDD4 (ENSTGUG00000006580) #26	ING2 (ENSTGUG00000006578) #28	CDKN2AIP (ENSTGUG00000018986) #30	ENSTGUG00000006572	ENSTGUG00000026343	WWC2 (ENSTGUG00000006543) #31	DCTD (ENSTGUG00000006536) #32	TENM3 (ENSTGUG00000006481) #34	AGA (ENSTGUG00000006468)	NEIL3 (ENSTGUG00000006458)	VEGFC (ENSTGUG00000006451)	SPCS3 (ENSTGUG00000006441)
Common canary	MODERN SPECIES	2	FAM149A (ENSSCAG00000009748)	TLR3 (ENSSCAG00000009765)	SORBS2 (ENSSCAG00000009833)	PDLIM3 (ENSSCAG00000009874)	UFSP2 (ENSSCAG00000009876)	ANKRD37 (ENSSCAG00000009883)	LRP2BP (ENSSCAG00000009884)	SNX25 (ENSSCAG00000009887)	CFAP97 (ENSSCAG00000009895)	SLC25A4 (ENSSCAG00000009897)	HELT (ENSSCAG00000009900)	ACSL1 (ENSSCAG00000009905)	CENPU (ENSSCAG00000009922)	PRIMPOL (ENSSCAG00000009936)	CASP3 (ENSSCAG00000009948)	IRF2 (ENSSCAG00000009952) #22	ENPP6 (ENSSCAG00000009956) #23	STOX2 (ENSSCAG00000009967) #24	TRAPPC11 (ENSSCAG00000009978) #25	RWDD4 (ENSSCAG00000009990) #26	ING2 (ENSSCAG00000009996) #28	CDKN2AIP (ENSSCAG00000010003) #30	ENSSCAG00000010009	WWC2 (ENSSCAG00000010012) #31	ENSSCAG00000010019	DCTD (ENSSCAG00000010024) #32	ENSSCAG00000010030	ENSSCAG00000010063 #34	ENSSCAG00000010138 #34	AGA (ENSSCAG00000010144)	NEIL3 (ENSSCAG00000010148)
Medium ground finch	MODERN SPECIES		CYP4V2 (ENSGFOG00000007237)	ENSGFOG00000007247	TLR3 (ENSGFOG00000007263)	SORBS2 (ENSGFOG00000007327)	PDLIM3 (ENSGFOG00000007443)	UFSP2 (ENSGFOG00000007452)	ANKRD37 (ENSGFOG00000007461)	LRP2BP (ENSGFOG00000007467)	SNX25 (ENSGFOG00000007479)	CFAP97 (ENSGFOG00000007496)	SLC25A4 (ENSGFOG00000007509)	ACSL1 (ENSGFOG00000007515)	CENPU (ENSGFOG00000007539)	PRIMPOL (ENSGFOG00000007557)	CASP3 (ENSGFOG00000007587)	IRF2 (ENSGFOG00000007601) #22	ENPP6 (ENSGFOG00000007617) #23	STOX2 (ENSGFOG00000007626) #24	TRAPPC11 (ENSGFOG00000007633) #25	RWDD4 (ENSGFOG00000007667) #26	ING2 (ENSGFOG00000007679) #28	CDKN2AIP (ENSGFOG00000007689) #30	ENSGFOG00000007698	WWC2 (ENSGFOG00000007703) #31	DCTD (ENSGFOG00000007713) #32	TENM3 (ENSGFOG00000007869) #34	ENSGFOG00000010900	AGA (ENSGFOG00000010904)	NEIL3 (ENSGFOG00000010910)	VEGFC (ENSGFOG00000010919)	SPCS3 (ENSGFOG00000010925)
Flycatcher	MODERN SPECIES	22	FAM149A (ENSFALG00000011942)	TLR3 (ENSFALG00000011936)	SORBS2 (ENSFALG00000011913)	PDLIM3 (ENSFALG00000028009)	UFSP2 (ENSFALG00000011890)	ANKRD37 (ENSFALG00000011883)	LRP2BP (ENSFALG00000011867)	SNX25 (ENSFALG00000011857)	CFAP97 (ENSFALG00000011850)	SLC25A4 (ENSFALG00000011836)	HELT (ENSFALG00000011825)	ACSL1 (ENSFALG00000011796)	CENPU (ENSFALG00000027362)	PRIMPOL (ENSFALG00000011764)	CASP3 (ENSFALG00000011745)	IRF2 (ENSFALG00000011727) #22	ENPP6 (ENSFALG00000011715) #23	STOX2 (ENSFALG00000011708) #24	TRAPPC11 (ENSFALG00000011667) #25	RWDD4 (ENSFALG00000011646) #26	ING2 (ENSFALG00000014622) #28	CDKN2AIP (ENSFALG00000011643) #30	ENSFALG00000014601	WWC2 (ENSFALG00000011638) #31	DCTD (ENSFALG00000027516) #32	ENSFALG00000025955	TENM3 (ENSFALG00000011630) #34	AGA (ENSFALG00000026144)	NEIL3 (ENSFALG00000011605)	VEGFC (ENSFALG00000011590)	SPCS3 (ENSFALG00000024232)
Great tit	MODERN SPECIES	23	FAM149A (ENSPMJG00000002707)	TLR3 (ENSPMJG00000002706)	SORBS2 (ENSPMJG00000002563)	PDLIM3 (ENSPMJG00000002446)	UFSP2 (ENSPMJG00000002432)	ANKRD37 (ENSPMJG00000002421)	LRP2BP (ENSPMJG00000002404)	SNX25 (ENSPMJG00000002381)	CFAP97 (ENSPMJG00000002379)	SLC25A4 (ENSPMJG00000002371)	HELT (ENSPMJG00000002361)	ACSL1 (ENSPMJG00000002332)	CENPU (ENSPMJG00000002306)	PRIMPOL (ENSPMJG00000002243)	CASP3 (ENSPMJG00000002233)	IRF2 (ENSPMJG00000002224) #22	ENPP6 (ENSPMJG00000002212) #23	STOX2 (ENSPMJG00000002130) #24	TRAPPC11 (ENSPMJG00000002099) #25	RWDD4 (ENSPMJG00000002084) #26	ING2 (ENSPMJG00000002082) #28	CDKN2AIP (ENSPMJG00000002066) #30	ENSPMJG00000001952	WWC2 (ENSPMJG00000001943) #31	DCTD (ENSPMJG00000001934) #32	ENSPMJG00000001933	TENM3 (ENSPMJG00000001818) #34	AGA (ENSPMJG00000001779)	NEIL3 (ENSPMJG00000001773)	SPCS3 (ENSPMJG00000001714)	ASB5 (ENSPMJG00000001700)
African ostrich	MODERN SPECIES	664	TLR3 (ENSSCUG00000007635)	SORBS2 (ENSSCUG00000007611)	PDLIM3 (ENSSCUG00000007600)	ENSSCUG00000007598	C4orf47 (ENSSCUG00000007593)	UFSP2 (ENSSCUG00000007589)	ANKRD37 (ENSSCUG00000007585)	LRP2BP (ENSSCUG00000007580)	SNX25 (ENSSCUG00000007573)	CFAP97 (ENSSCUG00000007566)	ENSSCUG00000007558	ACSL1 (ENSSCUG00000007538)	CENPU (ENSSCUG00000007526)	CASP3 (ENSSCUG00000007522)	PRIMPOL (ENSSCUG00000007520)	IRF2 (ENSSCUG00000007518) #22	ENPP6 (ENSSCUG00000007511) #23	STOX2 (ENSSCUG00000007508) #24	TRAPPC11 (ENSSCUG00000007446) #25	RWDD4 (ENSSCUG00000007404) #26	ING2 (ENSSCUG00000007399) #28	CDKN2AIP (ENSSCUG00000007398) #30	ENSSCUG00000007394	ENSSCUG00000007393	WWC2 (ENSSCUG00000007389) #31	DCTD (ENSSCUG00000007382) #32	ENSSCUG00000007357 #34	ENSSCUG00000007328 #34	AGA (ENSSCUG00000007321)	NEIL3 (ENSSCUG00000007318)	VEGFC (ENSSCUG00000007317)
Australian saltwater crocodile	MODERN SPECIES	33									SNX25 (ENSCPRG00005000365)	CFAP97 (ENSCPRG00005000362)	SLC25A4 (ENSCPRG00005000360)	ACSL1 (ENSCPRG00005000347)	CENPU (ENSCPRG00005000304)	PRIMPOL (ENSCPRG00005000286)	CASP3 (ENSCPRG00005000281)	IRF2 (ENSCPRG00005000275) #22	ENPP6 (ENSCPRG00005000200) #23	STOX2 (ENSCPRG00005000172) #24	TRAPPC11 (ENSCPRG00005000128) #25	RWDD4 (ENSCPRG00005000113) #26	ENSCPRG00005000104	ING2 (ENSCPRG00005000098) #28	ENSCPRG00005000093 #30	ENSCPRG00005000087	WWC2 (ENSCPRG00005000071) #31	DCTD (ENSCPRG00005000066) #32	ENSCPRG00005011479 #34	ENSCPRG00005011461 #34	AGA (ENSCPRG00005011436)	NEIL3 (ENSCPRG00005011433)	VEGFC (ENSCPRG00005011429)
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00940000157056	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851
Goode s thornscrub tortoise	MODERN SPECIES	19	SORBS2 (ENSGEVG00005002268)	PDLIM3 (ENSGEVG00005002622)	ENSGEVG00005002632	C4orf47 (ENSGEVG00005002648)	UFSP2 (ENSGEVG00005002671)	ANKRD37 (ENSGEVG00005002685)	LRP2BP (ENSGEVG00005002705)	SNX25 (ENSGEVG00005002730)	CFAP97 (ENSGEVG00005002753)	SLC25A4 (ENSGEVG00005002767)	HELT (ENSGEVG00005002785)	ACSL1 (ENSGEVG00005002810)	CENPU (ENSGEVG00005002846)	PRIMPOL (ENSGEVG00005002881)	CASP3 (ENSGEVG00005002909)	IRF2 (ENSGEVG00005002937) #22	ENPP6 (ENSGEVG00005002964) #23	STOX2 (ENSGEVG00005003037) #24	TRAPPC11 (ENSGEVG00005003067) #25	RWDD4 (ENSGEVG00005003154) #26	ENSGEVG00005003168	ING2 (ENSGEVG00005003175) #28	ENSGEVG00005003189 #30	ENSGEVG00005003196	ENSGEVG00005003207 #31	ENSGEVG00005003220 #31	ENSGEVG00005003226 #31	DCTD (ENSGEVG00005003233) #32	ENSGEVG00005003257 #34	AGA (ENSGEVG00005003296)	ENSGEVG00005003316
Abingdon island giant tortoise	MODERN SPECIES	2701																IRF2 (ENSCABG00000012417) #22	ENPP6 (ENSCABG00000012420) #23	STOX2 (ENSCABG00000012427) #24	TRAPPC11 (ENSCABG00000012506) #25	RWDD4 (ENSCABG00000013827) #26	ING2 (ENSCABG00000013832) #28	ENSCABG00000013836 #30
Emydidae	ANCESTRAL SPECIES	1	ENSGT00940000156741	ENSGT00950000183866	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT01050000246068	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00950000185893	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	704	C4orf47 (ENSCPBG00000008566)	UFSP2 (ENSCPBG00000008557)	ANKRD37 (ENSCPBG00000008552)	LRP2BP (ENSCPBG00000008548)	SNX25 (ENSCPBG00000008527)	CFAP97 (ENSCPBG00000008512)	SLC25A4 (ENSCPBG00000008504)	ENSCPBG00000008502	HELT (ENSCPBG00000008468)	ACSL1 (ENSCPBG00000008456)	CENPU (ENSCPBG00000008437)	ENSCPBG00000008432	ENSCPBG00000008426	CASP3 (ENSCPBG00000008419)	ENSCPBG00000008414	ENSCPBG00000008410 #22	ENPP6 (ENSCPBG00000008404) #23	STOX2 (ENSCPBG00000008387) #24	TRAPPC11 (ENSCPBG00000008347) #25	RWDD4 (ENSCPBG00000008322) #26	ENSCPBG00000008310	ING2 (ENSCPBG00000008299) #28	ENSCPBG00000008289 #30	ENSCPBG00000008281	WWC2 (ENSCPBG00000008249) #31	DCTD (ENSCPBG00000008229) #32	ENSCPBG00000008146 #34	ENSCPBG00000008109 #34
painted turtle	MODERN SPECIES	605																ENSCPBG00000004283 #22
Three-toed box turtle	MODERN SPECIES	26	SORBS2 (ENSTMTG00000006611)	PDLIM3 (ENSTMTG00000006561)	ENSTMTG00000006515	C4orf47 (ENSTMTG00000006500)	UFSP2 (ENSTMTG00000006473)	ANKRD37 (ENSTMTG00000006459)	LRP2BP (ENSTMTG00000006432)	SNX25 (ENSTMTG00000006345)	CFAP97 (ENSTMTG00000006321)	SLC25A4 (ENSTMTG00000006311)	HELT (ENSTMTG00000006270)	ACSL1 (ENSTMTG00000006186)	CENPU (ENSTMTG00000006143)	PRIMPOL (ENSTMTG00000006103)	CASP3 (ENSTMTG00000006087)	IRF2 (ENSTMTG00000006062) #22	ENPP6 (ENSTMTG00000005829) #23	STOX2 (ENSTMTG00000005793) #24	TRAPPC11 (ENSTMTG00000005709) #25	RWDD4 (ENSTMTG00000005667) #26	ENSTMTG00000005652	ING2 (ENSTMTG00000005641) #28	ENSTMTG00000005613 #30	ENSTMTG00000005598 #30	ENSTMTG00000005586	WWC2 (ENSTMTG00000005538) #31	DCTD (ENSTMTG00000005516) #32	TENM3 (ENSTMTG00000005465) #34	AGA (ENSTMTG00000005446)	ENSTMTG00000005431	VEGFC (ENSTMTG00000005414)
Chinese turtle	MODERN SPECIES	1610																IRF2 (ENSPSIG00000016830) #22	ENPP6 (ENSPSIG00000016255) #23	STOX2 (ENSPSIG00000014957) #24	TRAPPC11 (ENSPSIG00000010510) #25	RWDD4 (ENSPSIG00000010480) #26	ING2 (ENSPSIG00000001178) #28	CDKN2AIP (ENSPSIG00000010378) #30	ENSPSIG00000001171	WWC2 (ENSPSIG00000009796) #31	DCTD (ENSPSIG00000008907) #32	TENM3 (ENSPSIG00000012946) #34	ENSPSIG00000001162	ENSPSIG00000001159	AGA (ENSPSIG00000012881)	NEIL3 (ENSPSIG00000012155)
Anura	ANCESTRAL SPECIES	2	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00940000153232.b	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000158376 #30	ENSGT00940000161922.i.b	ENSGT00410000025556.a.a.a.b #31	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223
Leishan spiny toad	MODERN SPECIES		ANKRD37 (ENSLLEG00000000570)	LRP2BP (ENSLLEG00000000525)	ENSLLEG00000000509	SNX25 (ENSLLEG00000000476)	CFAP97 (ENSLLEG00000000463)	ENSLLEG00000000450	SLC25A4 (ENSLLEG00000000431)	HELT (ENSLLEG00000000418)	ENSLLEG00000000408	ENSLLEG00000000225	ENSLLEG00000000155	ENSLLEG00000000120	ENSLLEG00000000097	PRIMPOL (ENSLLEG00000000076)	CASP3 (ENSLLEG00000000059)	IRF2 (ENSLLEG00000000038) #22	ENPP6 (ENSLLEG00000024207) #23	ENSLLEG00000024153	STOX2 (ENSLLEG00000024013) #24	ENSLLEG00000023953	ENSLLEG00000023910 #24	TRAPPC11 (ENSLLEG00000023088) #25	RWDD4 (ENSLLEG00000022920) #26	ENSLLEG00000022848	ENSLLEG00000021774	ING2 (ENSLLEG00000021707) #28	CDKN2AIP (ENSLLEG00000021640) #30	ENSLLEG00000021624	ENSLLEG00000021589	ENSLLEG00000021452	WWC2 (ENSLLEG00000020987) #31
Frog	MODERN SPECIES		ufsp2 (ENSXETG00000032835)	ankrd37 (ENSXETG00000025738)	lrp2bp (ENSXETG00000001561)	snx25 (ENSXETG00000031703)	cfap97 (ENSXETG00000034114)	slc25a4 (ENSXETG00000025740)	ENSXETG00000037366	helt (ENSXETG00000030981)	acsl1 (ENSXETG00000001539)	cenpu (ENSXETG00000031559)	casp3.1 (ENSXETG00000030678)	ENSXETG00000038298	primpol (ENSXETG00000001535)	casp3.2 (ENSXETG00000045371)	enpp6 (ENSXETG00000001536) #23	irf2 (ENSXETG00000045571) #22	stox2 (ENSXETG00000001533) #24	ENSXETG00000042755	ENSXETG00000048300	trappc11 (ENSXETG00000019069) #25	rwdd4 (ENSXETG00000019065) #26	ENSXETG00000039273	ing2 (ENSXETG00000019052) #28	ENSXETG00000041521	cdkn2aip (ENSXETG00000019049) #30	ENSXETG00000034028	ENSXETG00000044938	wwc2 (ENSXETG00000025753) #31	dctd (ENSXETG00000019042) #32	tenm3 (ENSXETG00000031472) #34	ENSXETG00000048545
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	1945												ACSL1 (ENSLACG00000008655)	CENPU (ENSLACG00000007883)	PRIMPOL (ENSLACG00000007468)	CASP3 (ENSLACG00000006550)	IRF2 (ENSLACG00000004013) #22
Coelacanth	MODERN SPECIES	275	eif4e1c (ENSLACG00000015230)	ENSLACG00000014952	ENSLACG00000014877	SLC25A16 (ENSLACG00000014037)	DNA2 (ENSLACG00000013651)	PBLD (ENSLACG00000013543)	HNRNPH3 (ENSLACG00000013291)	RUFY2 (ENSLACG00000012724)	TSPAN15 (ENSLACG00000011976)	TACR2 (ENSLACG00000010555)	HK1 (ENSLACG00000009420)	HKDC1 (ENSLACG00000008562)	SUPV3L1 (ENSLACG00000008028)	VPS26A (ENSLACG00000007483)	KIFBP (ENSLACG00000004273)	ENSLACG00000003594 #22	DDX21 (ENSLACG00000000658)
Actinopterygii	ANCESTRAL SPECIES	21	ENSGT00940000157056.a	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.b	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00940000163251.b	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851	ENSGT00910000144159.B	ENSGT00940000158602	ENSGT00390000006915.d	ENSGT01080000257376.a.b.a.a
Reedfish	MODERN SPECIES	13	zgc:153146 (ENSECRG00000002198)	ufsp2 (ENSECRG00000002212)	ankrd37 (ENSECRG00000002233)	lrp2bp (ENSECRG00000002243)	snx25 (ENSECRG00000002276)	cfap97 (ENSECRG00000002315)	slc25a4 (ENSECRG00000002323)	helt (ENSECRG00000002338)	ACSL1 (ENSECRG00000002363)	ENSECRG00000002395	ENSECRG00000002428	primpol (ENSECRG00000002487)	casp3a (ENSECRG00000002508)	ENSECRG00000002525	ENSECRG00000002535	IRF2 (ENSECRG00000002559) #22	enpp6 (ENSECRG00000002573) #23	STOX2 (ENSECRG00000002588) #24	ENSECRG00000002611	ENSECRG00000002642	trappc11 (ENSECRG00000002691) #25	rwdd (ENSECRG00000002715) #26	ing2 (ENSECRG00000002724) #28	WWC2 (ENSECRG00000002739) #31	dctd (ENSECRG00000002775) #32	ENSECRG00000002811	ENSECRG00000002850 #34	ENSECRG00000002879	tenm3 (ENSECRG00000002887) #34	ENSECRG00000002892	ENSECRG00000002899
Neopterygii	ANCESTRAL SPECIES	2	ENSGT00940000157056.a	ENSGT00940000156741	ENSGT00390000010980	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.b	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000015511	ENSGT00390000003901	ENSGT00940000153232.a.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d #24	ENSGT00940000163251.b	ENSGT00390000006550 #25	ENSGT00390000015545 #26	ENSGT00940000167021	ENSGT00940000158194 #28	ENSGT00940000153230.A	ENSGT00940000156167.b	ENSGT00390000009223	ENSGT00940000159851	ENSGT00910000144159.B	ENSGT00940000158602	ENSGT00390000006915.d	ENSGT01080000257376.a.b.a.a
Spotted gar	MODERN SPECIES	670	SORBS2 (ENSLOCG00000013818)	pdlim3b (ENSLOCG00000013811)	ENSLOCG00000013804	zgc:153146 (ENSLOCG00000013800)	ufsp2 (ENSLOCG00000013795)	lrp2bp (ENSLOCG00000013790)	snx25 (ENSLOCG00000013780)	cfap97 (ENSLOCG00000013777)	slc25a4 (ENSLOCG00000013773)	ENSLOCG00000013771	helt (ENSLOCG00000013768)	acsl1b (ENSLOCG00000013758)	ENSLOCG00000013756	primpol (ENSLOCG00000013749)	casp3a (ENSLOCG00000013742)	irf2 (ENSLOCG00000013738) #22	enpp6 (ENSLOCG00000013730) #23	STOX2 (ENSLOCG00000013723) #24	ENSLOCG00000013715	trappc11 (ENSLOCG00000013704) #25	rwdd (ENSLOCG00000013699) #26	ENSLOCG00000013696	WWC2 (ENSLOCG00000013682) #31	dctd (ENSLOCG00000013678) #32	TENM3 (ENSLOCG00000013649) #34	aga (ENSLOCG00000013645)	neil3 (ENSLOCG00000013638)	vegfc (ENSLOCG00000013634)	spcs3 (ENSLOCG00000013631)	ASB5 (ENSLOCG00000013627)	spata4 (ENSLOCG00000013625)
Osteoglossocephalai	ANCESTRAL SPECIES	111	ENSGT00940000156741	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000013490	ENSGT00950000182856.a.a.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000165411.b	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000003901	ENSGT00940000153232.a.b.a	ENSGT00940000153232.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d.a.a #24	ENSGT00520000055589.d.b #24	ENSGT00390000006550 #25
Clupeocephala	ANCESTRAL SPECIES	28													ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000158457 #23	ENSGT00520000055589.d.a.a #24	ENSGT00940000163251.b	ENSGT00520000055589.d.b #24	ENSGT00390000006550 #25	ENSGT00390000014635	ENSGT00390000006413	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000013284	ENSGT00390000008738	ENSGT00390000009871
Euteleosteomorpha	ANCESTRAL SPECIES	9	ENSGT00940000161151	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.b #24	ENSGT00940000163251.b	ENSGT00520000055589.d.a.a #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000164070.a	ENSGT00940000163551.i.a	ENSGT01030000235147	ENSGT00950000183026.A.a.a.a	ENSGT00390000017153.a	ENSGT01060000249126	ENSGT00940000168334
Protacanthopterygii	ANCESTRAL SPECIES	19	ENSGT00390000013284	ENSGT00940000161151	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00940000163251.b	ENSGT00520000055589.d.a.a #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000164070.a	ENSGT00940000163551.i.a	ENSGT01030000235147	ENSGT00950000183026.A.a.a.a	ENSGT00390000017153.a	ENSGT01060000249126	ENSGT00940000168334
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000159063.c #22
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000156056.A.i.a	ENSGT00940000155282	ENSGT00390000007364.i	ENSGT01050000244840.B.l.a.a	ENSGT00940000154287.a.n	ENSGT00940000178781	ENSGT00940000162413	ENSGT00390000017146.b.n	ENSGT00950000182950.B.k	ENSGT00940000164099.a.a	ENSGT00940000156984.b.i.b	ENSGT00510000047104.d	ENSGT00390000015476.i	ENSGT01050000244897.a.b.a.c	ENSGT00950000183071.a.b.p	ENSGT00940000159063.c #22	ENSGT00390000017860.a.b.e	ENSGT00940000155756.hb	ENSGT00940000161074.a.f	ENSGT00950000183159.b.c.b.pb.b.a.a	ENSGT00940000158108.e.b	ENSGT00940000156711.k.a.d	ENSGT00390000001134.a.a.e.a	ENSGT01030000234518.C.a.b.a.b.a.c	ENSGT01030000234518.C.a.b.a.a.f	ENSGT00390000017163	ENSGT00940000154200.A.a.d	ENSGT00940000160645.o.y.b	ENSGT00940000158521	ENSGT00940000156023	ENSGT01100000263555.a.a.b
Salmo	ANCESTRAL SPECIES	15	ENSGT00390000007364.i	ENSGT01050000244840.B.l.a.a	ENSGT00940000154287.a.n	ENSGT00940000178781	ENSGT00940000162413	ENSGT00390000017146.b.n	ENSGT00950000182950.B.k	ENSGT00940000164099.a.a	ENSGT00940000156984.b.i.b	ENSGT00530000063983.A.b.b.b.a.b	ENSGT00510000047104.d	ENSGT00390000015476.i	ENSGT00390000004360.a.b.a.a.a.e	ENSGT01050000244897.a.b.a.c	ENSGT00950000183071.a.b.p	ENSGT00940000159063.c #22	ENSGT00390000017860.a.b.e	ENSGT00940000155756.hb	ENSGT00940000161074.a.f	ENSGT00950000183159.b.c.b.pb.b.b	ENSGT00940000158108.e.b	ENSGT00940000156711.k.a.d	ENSGT00390000001134.a.a.e.a	ENSGT01030000234518.C.a.b.a.b.a.c	ENSGT01030000234518.C.a.b.a.a.f	ENSGT00390000017163	ENSGT00940000154200.A.a.c	ENSGT00940000160645.o.y.a
River trout	MODERN SPECIES	16	ENSSTUG00000003859	ENSSTUG00000003215	ENSSTUG00000004134	ENSSTUG00000004066	ENSSTUG00000004053	ENSSTUG00000003990	ENSSTUG00000003962	ENSSTUG00000003891	ENSSTUG00000003775	mmgt1 (ENSSTUG00000003609)	pabir2 (ENSSTUG00000003567)	cab39l1 (ENSSTUG00000003553)	gpc4 (ENSSTUG00000003403)	hs6st2 (ENSSTUG00000002974)	ENSSTUG00000002720	irf2 (ENSSTUG00000020259) #22	slain1a (ENSSTUG00000020252)	mycbp2 (ENSSTUG00000019302)	kctd12.1 (ENSSTUG00000019250)	ENSSTUG00000019233	ENSSTUG00000019229	klf12b (ENSSTUG00000019204)	KLF5 (ENSSTUG00000019117)	dachd (ENSSTUG00000019020)	gpr183a (ENSSTUG00000019004)	ENSSTUG00000019000	si:ch211-184m13.4 (ENSSTUG00000018966)	clybl (ENSSTUG00000018923)	zic5 (ENSSTUG00000018920)	zic2a (ENSSTUG00000018900)	ENSSTUG00000018892
Atlantic salmon	MODERN SPECIES	17	ENSSSAG00000113925	ENSSSAG00000118162	ENSSSAG00000092055	ENSSSAG00000107059	ENSSSAG00000101119	ENSSSAG00000116079	ENSSSAG00000112804	ENSSSAG00000093784	ENSSSAG00000092294	ENSSSAG00000106461	ENSSSAG00000119873	cab39 (ENSSSAG00000042531)	ENSSSAG00000070792	hs6st2 (ENSSSAG00000101582)	ENSSSAG00000118991	ENSSSAG00000042069 #22	ENSSSAG00000041832	ENSSSAG00000041776	ENSSSAG00000110449	ENSSSAG00000010304	ENSSSAG00000113444	ENSSSAG00000083304	ENSSSAG00000009846	ENSSSAG00000112120	klf12b (ENSSSAG00000009831)	ENSSSAG00000009791	dachd (ENSSSAG00000042489)	gpr183a (ENSSSAG00000087399)	si:ch211-184m13.4 (ENSSSAG00000042706)	CLYBL (ENSSSAG00000084868)	zic5 (ENSSSAG00000118197)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000156056.A.i.a	ENSGT00940000155282	ENSGT00390000007364.i	ENSGT01050000244840.B.l.a.a	ENSGT00940000154287.a.n	ENSGT00940000178781	ENSGT00940000162413	ENSGT00390000017146.b.n	ENSGT00950000182950.B.k	ENSGT00940000164099.a.a	ENSGT00510000047104.d	ENSGT00390000015476.i	ENSGT00390000004360.a.b.a.a.a.e	ENSGT01050000244897.a.b.a.c	ENSGT00950000183071.a.b.p	ENSGT00940000159063.c #22	ENSGT00390000017860.a.b.e	ENSGT00940000155756.hb	ENSGT00940000161074.a.f	ENSGT00950000183159.b.c.b.pb.b.a.a	ENSGT00940000158108.e.b	ENSGT00940000156711.k.a.d	ENSGT00390000001134.a.a.e.a	ENSGT01030000234518.C.a.b.a.b.a.c	ENSGT01030000234518.C.a.b.a.a.f	ENSGT00390000017163.f	ENSGT00940000154200.A.a.c	ENSGT00940000160645.o.y.a	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000156056.A.i.a	ENSGT00940000155282	ENSGT00390000007364.i	ENSGT01050000244840.B.l.a.a	ENSGT00940000154287.a.n	ENSGT00940000178781	ENSGT00940000162413	ENSGT00390000017146.b.n	ENSGT00950000182950.B.k	ENSGT00940000164099.a.a	ENSGT00510000047104.d	ENSGT00390000015476.i	ENSGT00390000004360.a.b.a.a.a.e	ENSGT01050000244897.a.b.a.c	ENSGT00950000183071.a.b.p	ENSGT00940000159063.c #22	ENSGT00390000017860.a.b.e	ENSGT00940000155756.hb	ENSGT00940000161074.a.f	ENSGT00950000183159.b.c.b.pb.b.a.a	ENSGT00940000158108.e.b	ENSGT00940000156711.k.a.d	ENSGT00390000001134.a.a.e.a	ENSGT01030000234518.C.a.b.a.b.a.c	ENSGT01030000234518.C.a.b.a.a.f	ENSGT00940000154200.A.a.c	ENSGT00940000160645.o.y.a	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b.d	ENSGT00390000013174.c
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005019485	DNAH7 (ENSOTSG00005010938)	faima (ENSOTSG00005010905)	P2RY8 (ENSOTSG00005010903)	shox (ENSOTSG00005010901)	ENSOTSG00005010900	asmtl (ENSOTSG00005010813)	upf3a (ENSOTSG00005010791)	cdc16 (ENSOTSG00005008827)	ENSOTSG00005008825	mmgt1 (ENSOTSG00005008824)	pabir2 (ENSOTSG00005008823)	cab39l1 (ENSOTSG00005008822)	gpc4 (ENSOTSG00005008810)	hs6st2 (ENSOTSG00005008805)	irf2 (ENSOTSG00005008803) #22	ENSOTSG00005008801	slain1a (ENSOTSG00005008799)	mycbp2 (ENSOTSG00005006066)	kctd12.1 (ENSOTSG00005005988)	lmo7a (ENSOTSG00005005985)	ENSOTSG00005005983	klf12b (ENSOTSG00005005982)	ENSOTSG00005005981	KLF5 (ENSOTSG00005005979)	dachd (ENSOTSG00005005947)	gpr183a (ENSOTSG00005005945)	si:ch211-184m13.4 (ENSOTSG00005005944)	zic5 (ENSOTSG00005005943)	zic2a (ENSOTSG00005005940)	ENSOTSG00005005938
Coho salmon	MODERN SPECIES	11	tmeff2a (ENSOKIG00005002114)	DNAH7 (ENSOKIG00005000881)	faima (ENSOKIG00005000396)	P2RY8 (ENSOKIG00005000386)	SHOX (ENSOKIG00005000371)	ENSOKIG00005000363	asmtl (ENSOKIG00005000291)	upf3a (ENSOKIG00005000259)	cdc16 (ENSOKIG00005000182)	ENSOKIG00005000107	MMGT1 (ENSOKIG00005000085)	ENSOKIG00005000073	ENSOKIG00005000051	GPC4 (ENSOKIG00005007517)	ENSOKIG00005007508	ENSOKIG00005007492 #22	slain1a (ENSOKIG00005007484)	ENSOKIG00005007462	mycbp2 (ENSOKIG00005003549)	KCTD12 (ENSOKIG00005003144)	lmo7a (ENSOKIG00005003087)	ENSOKIG00005003060	ENSOKIG00005003047	klf12b (ENSOKIG00005003034)	KLF5 (ENSOKIG00005003007)	dachd (ENSOKIG00005002933)	gpr183a (ENSOKIG00005002901)	si:ch211-184m13.4 (ENSOKIG00005002894)	zic5 (ENSOKIG00005002886)	zic2a (ENSOKIG00005002847)	ENSOKIG00005002832
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000076638	ENSOMYG00000009040	shox (ENSOMYG00000009028)	ENSOMYG00000062250	asmtl (ENSOMYG00000008957)	ENSOMYG00000052640	upf3a (ENSOMYG00000008729)	cdc16 (ENSOMYG00000008313)	ENSOMYG00000007805	ENSOMYG00000049465	ENSOMYG00000007767	ENSOMYG00000007739	ENSOMYG00000007718	ENSOMYG00000007672	ENSOMYG00000007568	ENSOMYG00000007555 #22	ENSOMYG00000076488	ENSOMYG00000063235	ENSOMYG00000007522	ENSOMYG00000007492	ENSOMYG00000066068	ENSOMYG00000005556	ENSOMYG00000072878	ENSOMYG00000077442	ENSOMYG00000048916	klf12b (ENSOMYG00000002745)	ENSOMYG00000060115	ENSOMYG00000002705	dachd (ENSOMYG00000002697)	gpr183a (ENSOMYG00000002661)	si:ch211-184m13.4 (ENSOMYG00000002639)
Huchen	MODERN SPECIES	577																IRF2 (ENSHHUG00000010668) #22	snx25 (ENSHHUG00000010685)	pdgfrl (ENSHHUG00000010726)	ENSHHUG00000010736	slain1a (ENSHHUG00000010742)	mycbp2 (ENSHHUG00000010762)	ENSHHUG00000010833	kctd12.1 (ENSHHUG00000010851)	ENSHHUG00000010858
Salmoninae	ANCESTRAL SPECIES	51	ENSGT00390000008738.a	ENSGT00390000013284	ENSGT00940000161151.d	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.a.a.c #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.l	ENSGT00940000159063.d #22	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000156741.d	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000164070.a	ENSGT00390000006641.j	ENSGT00940000163551.i.a	ENSGT01030000235147	ENSGT00950000183026.A.a.a.a	ENSGT00390000017153.a.d
Salmoninae_a	ANCESTRAL SPECIES	41	ENSGT00390000008738.a	ENSGT00390000013284	ENSGT00940000161151.d	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.a.a.c #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.l	ENSGT00940000159063.d #22	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000156741.d	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000163551.i.a	ENSGT01030000235147	ENSGT00950000183026.A.a.a.a	ENSGT00390000017153.a.d	ENSGT01060000249126	ENSGT00940000168334
Oncorhynchus	ANCESTRAL SPECIES	34	ENSGT00390000008738.a	ENSGT00390000013284	ENSGT00940000161151.d	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.a.a.c #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.l	ENSGT00940000159063.d #22	ENSGT00950000182856.a.a.b.i	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000156741.d	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000164070.a	ENSGT00940000163551.i.a	ENSGT01030000235147	ENSGT00950000183026.A.a.a.a	ENSGT01060000249126	ENSGT00390000017153.a.d
Oncorhynchus_a	ANCESTRAL SPECIES	34	ENSGT00390000008738.a	ENSGT00390000013284	ENSGT00940000161151.d	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.a.a.c #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.l	ENSGT00940000159063.d #22	ENSGT00950000182856.a.a.b.i	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000156741.d	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000163551.i.a	ENSGT01030000235147	ENSGT00950000183026.A.a.a.a	ENSGT01060000249126	ENSGT00390000017153.a.d	ENSGT00940000168334
Chinook salmon	MODERN SPECIES	32	slbp (ENSOTSG00005046533)	tmem129 (ENSOTSG00005046531)	atoh8 (ENSOTSG00005046530)	st3gal5 (ENSOTSG00005046529)	POLR1A (ENSOTSG00005045517)	ptcd3 (ENSOTSG00005045507)	immt (ENSOTSG00005045500)	rnf103 (ENSOTSG00005045497)	abhd18 (ENSOTSG00005045494)	trappc11 (ENSOTSG00005045491) #25	STOX2 (ENSOTSG00005045487) #24	enpp6 (ENSOTSG00005045478) #23	acsl1b (ENSOTSG00005042805)	ENSOTSG00005042800	CASP3 (ENSOTSG00005042799)	irf2 (ENSOTSG00005042794) #22	snx25 (ENSOTSG00005041791)	lrp2bp (ENSOTSG00005041776)	zgc:153146 (ENSOTSG00005041775)	pdlim3b (ENSOTSG00005041773)	SORBS2 (ENSOTSG00005041767)	ENSOTSG00005041766	cyp4v2b (ENSOTSG00005041580)	MTNR1A (ENSOTSG00005041573)	FAT1 (ENSOTSG00005035747)	ENSOTSG00005035715	ENSOTSG00005035712	ENSOTSG00005035707	ENSOTSG00005035705	pdgfrl (ENSOTSG00005035704)	slc7a2 (ENSOTSG00005035274)
Rainbow trout	MODERN SPECIES	23	tmem129 (ENSOMYG00000044854)	ATOH8 (ENSOMYG00000044853)	st3gal5 (ENSOMYG00000044848)	POLR1A (ENSOMYG00000044037)	ptcd3 (ENSOMYG00000043863)	immt (ENSOMYG00000043811)	rnf103 (ENSOMYG00000043791)	ENSOMYG00000043775	TRAPPC11 (ENSOMYG00000043742) #25	ENSOMYG00000043707 #24	ENSOMYG00000017190	ENPP6 (ENSOMYG00000043582) #23	ACSL1 (ENSOMYG00000042760)	CENPU (ENSOMYG00000042671)	casp3b (ENSOMYG00000042666)	irf2 (ENSOMYG00000042654) #22	snx25 (ENSOMYG00000042556)	lrp2bp (ENSOMYG00000042541)	zgc:153146 (ENSOMYG00000042540)	pdlim3b (ENSOMYG00000042533)	SORBS2 (ENSOMYG00000042521)	ENSOMYG00000042507	cyp4v2b (ENSOMYG00000041876)	ENSOMYG00000066184	MTNR1A (ENSOMYG00000041841)	FAT1 (ENSOMYG00000040928)	ENSOMYG00000040797	ENSOMYG00000068321	ENSOMYG00000052637	ENSOMYG00000040784	ENSOMYG00000040762
Salmo	ANCESTRAL SPECIES	47	ENSGT00390000008738.a	ENSGT00390000013284	ENSGT00940000161151.d	ENSGT00940000157929	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.a.a.c #24	ENSGT00940000158457 #23	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.l	ENSGT00940000159063.d #22	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000156741.d	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000163551.i.a	ENSGT00950000183026.A.a.a.a	ENSGT00390000017153.a.d	ENSGT01060000249126	ENSGT00940000168334	ENSGT00940000155777.a
River trout	MODERN SPECIES	4	slbp (ENSSTUG00000029710)	tmem129 (ENSSTUG00000029744)	atoh8 (ENSSTUG00000029763)	st3gal5 (ENSSTUG00000029769)	POLR1A (ENSSTUG00000029808)	ptcd3 (ENSSTUG00000030973)	immt (ENSSTUG00000031019)	rnf103 (ENSSTUG00000031051)	abhd18 (ENSSTUG00000031060)	trappc11 (ENSSTUG00000031110) #25	STOX2 (ENSSTUG00000031375) #24	enpp6 (ENSSTUG00000031412) #23	acsl1b (ENSSTUG00000031870)	ENSSTUG00000036513	CASP3 (ENSSTUG00000036528)	irf2 (ENSSTUG00000036541) #22	snx25 (ENSSTUG00000036597)	lrp2bp (ENSSTUG00000037550)	zgc:153146 (ENSSTUG00000037563)	pdlim3b (ENSSTUG00000037581)	SORBS2 (ENSSTUG00000037641)	FAM149A (ENSSTUG00000037798)	cyp4v2b (ENSSTUG00000037860)	MTNR1A (ENSSTUG00000038291)	FAT1 (ENSSTUG00000038349)	ENSSTUG00000039097	ENSSTUG00000039111	pdgfrl (ENSSTUG00000039133)	ENSSTUG00000039140	slc7a2 (ENSSTUG00000039151)	mtmr7a (ENSSTUG00000039184)
Atlantic salmon	MODERN SPECIES	28	al3a2 (ENSSSAG00000063675)	slbp (ENSSSAG00000063884)	tmem129 (ENSSSAG00000063892)	atoh8 (ENSSSAG00000099210)	st3gal5 (ENSSSAG00000063904)	POLR1A (ENSSSAG00000063915)	ptcd3 (ENSSSAG00000063940)	immt (ENSSSAG00000063954)	ENSSSAG00000064109 #25	rnf103 (ENSSSAG00000063970)	abhd18 (ENSSSAG00000063977)	stox2 (ENSSSAG00000069705) #24	ENSSSAG00000069734 #23	ACSL1 (ENSSSAG00000070232)	ENSSSAG00000071426	irf2 (ENSSSAG00000071432) #22	snx25 (ENSSSAG00000071488)	lrp2bp (ENSSSAG00000106561)	zgc:153146 (ENSSSAG00000111648)	pdlim3 (ENSSSAG00000072246)	SORBS2 (ENSSSAG00000072262)	ENSSSAG00000072321	cyp4v2b (ENSSSAG00000072343)	mtnr1a (ENSSSAG00000072421)	FAT1 (ENSSSAG00000072503)	ENSSSAG00000075707	ENSSSAG00000075710	ENSSSAG00000091298	ENSSSAG00000075722	pdgfrl (ENSSSAG00000075719)	slc7a2 (ENSSSAG00000075730)
Huchen	MODERN SPECIES	1161											STOX2 (ENSHHUG00000001847) #24	enpp6 (ENSHHUG00000001851) #23	acsl1b (ENSHHUG00000001882)	ENSHHUG00000002379	CASP3 (ENSHHUG00000002389)	irf2 (ENSHHUG00000002419) #22	snx25 (ENSHHUG00000002447)	lrp2bp (ENSHHUG00000002571)	zgc:153146 (ENSHHUG00000002594)	pdlim3b (ENSHHUG00000002597)	ENSHHUG00000002608	ENSHHUG00000002618	FAM149A (ENSHHUG00000002670)	cyp4v2b (ENSHHUG00000002682)	MTNR1A (ENSHHUG00000002833)
Northern pike	MODERN SPECIES	3	slbp (ENSELUG00000027648)	tmem129 (ENSELUG00000012831)	atoh8 (ENSELUG00000012825)	st3gal5 (ENSELUG00000012810)	POLR1A (ENSELUG00000012769)	ptcd3 (ENSELUG00000012679)	immt (ENSELUG00000012627)	rnf103 (ENSELUG00000012575)	abhd18 (ENSELUG00000012559)	trappc11 (ENSELUG00000012491) #25	ENSELUG00000012423	STOX2 (ENSELUG00000012389) #24	enpp6 (ENSELUG00000012358) #23	acsl1b (ENSELUG00000012296)	ENSELUG00000012237	irf2 (ENSELUG00000012218) #22	lrp2bp (ENSELUG00000012186)	snx25 (ENSELUG00000012141)	zgc:153146 (ENSELUG00000012082)	SORBS2 (ENSELUG00000011973)	FAM149A (ENSELUG00000011812)	cyp4v2b (ENSELUG00000011780)	MTNR1A (ENSELUG00000011751)	FAT1 (ENSELUG00000011553)	ENSELUG00000010128	ENSELUG00000010084	ENSELUG00000010107	pdgfrl (ENSELUG00000010030)	slc7a2 (ENSELUG00000010001)	mtmr7a (ENSELUG00000009936)	cnot7 (ENSELUG00000009892)
Acanthomorphata	ANCESTRAL SPECIES	90							ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00950000182856.a.a.b	ENSGT00940000177201	ENSGT01090000260076.b.a	ENSGT00940000163421.a.d.b	ENSGT00950000183196.D.b	ENSGT00940000159795	ENSGT00940000165542	ENSGT00940000154436.c	ENSGT00450000040404.b	ENSGT00940000155503.b	ENSGT00940000162571	ENSGT00940000159942.b	ENSGT00940000160863	ENSGT00950000183189.a.b.b	ENSGT00950000182974.a.a.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	129							ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d
Percomorphaceae	ANCESTRAL SPECIES	100							ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b
Percomorphaceae_B	ANCESTRAL SPECIES	14	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b
Percomorphaceae_C	ANCESTRAL SPECIES	16	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000182912.b.a.a.b.b.a.a.a	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951
Percomorphaceae_D	ANCESTRAL SPECIES	17	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000182912.b.a.a.b.b.a.a.a	ENSGT00940000161248	ENSGT00920000149123.d
Anabantaria	ANCESTRAL SPECIES	15	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000182912.b.a.a.b.b.a.a.a	ENSGT00940000161248	ENSGT00920000149123.d
Anabantoidei	ANCESTRAL SPECIES	11	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00390000002414	ENSGT00390000014635	ENSGT00390000006413	ENSGT00940000161151	ENSGT00390000013284	ENSGT00390000009871	ENSGT00390000008738	ENSGT00390000002313	ENSGT00940000158825.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827
Climbing perch	MODERN SPECIES	1	ENSATEG00000017390	ENSATEG00000028361	ENSATEG00000017333	ENSATEG00000017319	ENSATEG00000028948	ENSATEG00000017197	ENSATEG00000017091	ENSATEG00000017043	ENSATEG00000016988	PTCD3 (ENSATEG00000016950)	ENSATEG00000016773	ST3GAL5 (ENSATEG00000016748)	ACSL1 (ENSATEG00000016665)	ENSATEG00000016652	CASP3 (ENSATEG00000016641)	irf2 (ENSATEG00000016626) #22	ENSATEG00000016601	ENSATEG00000016479	ENSATEG00000028862	ENSATEG00000026964	ENSATEG00000016426	ENSATEG00000029210	ENSATEG00000016383	ENSATEG00000016373	ENSATEG00000016358	ENSATEG00000016348	ENSATEG00000016337	rab33ba (ENSATEG00000016312)	ENSATEG00000016299	setd7 (ENSATEG00000016254)	ENSATEG00000026167
Siamese fighting fish	MODERN SPECIES	1	nkx1.2lb (ENSBSLG00000006999)	ENSBSLG00000007010	ENSBSLG00000007026	ENSBSLG00000001706	ENSBSLG00000001715	ENSBSLG00000001734	hvcn1 (ENSBSLG00000001744)	CNGA2 (ENSBSLG00000001783)	PLS3 (ENSBSLG00000001849)	ptcd3 (ENSBSLG00000001954)	POLR1A (ENSBSLG00000002233)	st3gal5 (ENSBSLG00000002464)	ACSL1 (ENSBSLG00000002859)	ENSBSLG00000003232	CASP3 (ENSBSLG00000003250)	irf2 (ENSBSLG00000003263) #22	ENSBSLG00000003565	ENSBSLG00000003605	ENSBSLG00000003651	RASGRP1 (ENSBSLG00000003731)	ENSBSLG00000003744	ENSBSLG00000003774	ENSBSLG00000003790	ENSBSLG00000003824	mcl1b (ENSBSLG00000003849)	ENSBSLG00000003869	SLITRK4 (ENSBSLG00000003893)	ENSBSLG00000003904	ENSBSLG00000003915	ENSBSLG00000003922	trappc11 (ENSBSLG00000003964) #25
Zig-zag eel	MODERN SPECIES	1	ints6l (ENSMAMG00000015886)	mmgt1 (ENSMAMG00000015907)	pfdn6 (ENSMAMG00000027326)	her5 (ENSMAMG00000026101)	her11 (ENSMAMG00000015944)	fgf20b (ENSMAMG00000028181)	MICU3 (ENSMAMG00000015978)	zdhhc2 (ENSMAMG00000016012)	cnot7 (ENSMAMG00000016046)	mtmr7a (ENSMAMG00000016081)	slc7a2 (ENSMAMG00000016123)	ENSMAMG00000026491	ACSL1 (ENSMAMG00000025532)	ENSMAMG00000016270	ENSMAMG00000016305	irf2 (ENSMAMG00000016342) #22	ENSMAMG00000016393	ENSMAMG00000016406	ENSMAMG00000016419	ENSMAMG00000025213	ENSMAMG00000016431	ENSMAMG00000016466	ENSMAMG00000016473	ENSMAMG00000025554	ST3GAL5 (ENSMAMG00000016486)	ENSMAMG00000016565	PTCD3 (ENSMAMG00000016642)	ENSMAMG00000016678	ENSMAMG00000016722	ENSMAMG00000016739	ENSMAMG00000016744
Carangaria	ANCESTRAL SPECIES	15	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000158277.a	ENSGT00980000198976	ENSGT00940000156295.h	ENSGT00940000166427	ENSGT00940000155249.h	ENSGT00940000154953.a	ENSGT00440000037338	ENSGT00940000170279	ENSGT00940000175899	ENSGT00950000183174.B.a.f	ENSGT00390000002932	ENSGT00390000005922.b
Pleuronectoidei	ANCESTRAL SPECIES	18	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248
Turbot	MODERN SPECIES	4	ENSSMAG00000013850	ENSSMAG00000013862	ENSSMAG00000013900	ENSSMAG00000036602	ENSSMAG00000013972	ENSSMAG00000014099	ENSSMAG00000014164	ENSSMAG00000014170	ENSSMAG00000014188	PTCD3 (ENSSMAG00000014274)	ENSSMAG00000014342	ST3GAL5 (ENSSMAG00000014487)	ACSL1 (ENSSMAG00000014521)	ENSSMAG00000014570	CASP3 (ENSSMAG00000014622)	irf2 (ENSSMAG00000014641) #22	ENSSMAG00000015439	ENSSMAG00000014688	ENSSMAG00000014675	ENSSMAG00000016109	ENSSMAG00000028263	ENSSMAG00000028547	ENSSMAG00000034703	ENSSMAG00000031596 #23	ENSSMAG00000027469 #24	ENSSMAG00000006124	ENSSMAG00000023509	ENSSMAG00000006102	ENSSMAG00000005593	ENSSMAG00000005520	ENSSMAG00000034279
Tongue sole	MODERN SPECIES	6	ENSCSEG00000020084	gria1a (ENSCSEG00000020093)	ENSCSEG00000020111	itk (ENSCSEG00000020127)	cyfip2 (ENSCSEG00000020134)	hmmr (ENSCSEG00000020147)	nkx2.5 (ENSCSEG00000020152)	STC2 (ENSCSEG00000020153)	cpeb4a (ENSCSEG00000020154)	DRD1 (ENSCSEG00000020160)	faf2 (ENSCSEG00000020164)	st3gal5 (ENSCSEG00000020172)	ENSCSEG00000020176	CASP3 (ENSCSEG00000020179)	ENSCSEG00000020183	irf2 (ENSCSEG00000020185) #22	POLR1A (ENSCSEG00000020190)	ptcd3 (ENSCSEG00000020225)	ENSCSEG00000020233	CNGA2 (ENSCSEG00000020272)	ENSCSEG00000020288	snx25 (ENSCSEG00000020291)	ENSCSEG00000020298	ENSCSEG00000020302	il1rapl2 (ENSCSEG00000020304)	ENSCSEG00000020309	ENSCSEG00000020311	ENSCSEG00000020316	ENSCSEG00000020318	ENSCSEG00000020322	rnf44 (ENSCSEG00000020327)
Carangaria_A	ANCESTRAL SPECIES	22	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00980000198976	ENSGT00940000158277.a	ENSGT00940000156295.h	ENSGT00940000166427	ENSGT00940000155249.h	ENSGT00940000154953.a	ENSGT00440000037338	ENSGT00940000170279	ENSGT00940000175899	ENSGT00950000183174.B.a.f	ENSGT00390000002932	ENSGT00390000005922.b
Seriola	ANCESTRAL SPECIES	22	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000155356.d.b.b.b.b.b	ENSGT00940000161248	ENSGT00940000181229	ENSGT00920000149123.d	ENSGT00980000198976	ENSGT00940000158277.a	ENSGT00940000156295.h	ENSGT00940000166427
Yellowtail amberjack	MODERN SPECIES	3053	ENSSLDG00000024481	ENSSLDG00000024469	ENSSLDG00000024459	ENSSLDG00000024454	il1rapl2 (ENSSLDG00000024431)	ENSSLDG00000024423	snx25 (ENSSLDG00000024388)	ENSSLDG00000024370	CNGA2 (ENSSLDG00000024302)	ENSSLDG00000024273	ptcd3 (ENSSLDG00000024255)	POLR1A (ENSSLDG00000024095)	st3gal5 (ENSSLDG00000024041)	acsl1b (ENSSLDG00000024006)	ENSSLDG00000023991	irf2 (ENSSLDG00000023981) #22	CASP3 (ENSSLDG00000023963)
Greater amberjack	MODERN SPECIES	67	HDAC3 (ENSSDUG00000014029)	ENSSDUG00000014068	ENSSDUG00000014142	zgc:194679 (ENSSDUG00000014233)	il1rapl2 (ENSSDUG00000014285)	ENSSDUG00000014371	snx25 (ENSSDUG00000014434)	ENSSDUG00000014470	CNGA2 (ENSSDUG00000014491)	ENSSDUG00000014516	ptcd3 (ENSSDUG00000014567)	POLR1A (ENSSDUG00000014631)	st3gal5 (ENSSDUG00000014689)	acsl1b (ENSSDUG00000014713)	CASP3 (ENSSDUG00000014781)	irf2 (ENSSDUG00000014804) #22	ENSSDUG00000014817	SLITRK4 (ENSSDUG00000014834)	ENSSDUG00000014871	ENSSDUG00000015258
Barramundi perch	MODERN SPECIES	28						ENSLCAG00010027358	ENSLCAG00010027357	ENSLCAG00010027355	ENSLCAG00010027354	ENSLCAG00010027352	ENSLCAG00010027348	acsl1b (ENSLCAG00010027323)	ENSLCAG00010027308	CASP3 (ENSLCAG00010027301)	ENSLCAG00010027299	irf2 (ENSLCAG00010027296) #22	ENSLCAG00010027292	SLITRK4 (ENSLCAG00010027291)
Eupercaria	ANCESTRAL SPECIES	12	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00940000159063 #22
Fugu	MODERN SPECIES	7													ENSTRUG00000021964	ENSTRUG00000027941	ENSTRUG00000020931	irf2 (ENSTRUG00000001842) #22	ENSTRUG00000032518	mcm9 (ENSTRUG00000026460)	gopc (ENSTRUG00000026145)	ENSTRUG00000027480	ufl1 (ENSTRUG00000001855)	mfsd4b (ENSTRUG00000002351)	REV3L (ENSTRUG00000002617)	ENSTRUG00000028393	fynb (ENSTRUG00000003538)	ccn6 (ENSTRUG00000031337)	tube1 (ENSTRUG00000005085)	dnal1 (ENSTRUG00000024991)	ENSTRUG00000005418	marcksa (ENSTRUG00000007040)	HDAC2 (ENSTRUG00000006770)
Eupecaria_A	ANCESTRAL SPECIES	13	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b
Ballan wrasse	MODERN SPECIES	67	ENSLBEG00000014637	zgc:194679 (ENSLBEG00000014693)	il1rapl2 (ENSLBEG00000014751)	ENSLBEG00000014894	snx25 (ENSLBEG00000014990)	ENSLBEG00000015111	ENSLBEG00000015134	ENSLBEG00000015159	CNGA2 (ENSLBEG00000015182)	ENSLBEG00000015245	ptcd3 (ENSLBEG00000015349)	POLR1A (ENSLBEG00000015401)	st3gal5 (ENSLBEG00000015582)	acsl1b (ENSLBEG00000015611)	ENSLBEG00000015682	irf2 (ENSLBEG00000015759) #22	ENSLBEG00000015845
Eupecaria_B	ANCESTRAL SPECIES	13	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b
Perciformes	ANCESTRAL SPECIES	13	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000179542	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b	ENSGT00940000164256
Perciformes_a	ANCESTRAL SPECIES	11	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248
Pike perch	MODERN SPECIES	52	ENSSLUG00000011948	ENSSLUG00000011951	ENSSLUG00000011953	ENSSLUG00000011955	snx25 (ENSSLUG00000012013)	ENSSLUG00000013215	ENSSLUG00000013240	CNGA2 (ENSSLUG00000013807)	ENSSLUG00000014015	ptcd3 (ENSSLUG00000017292)	POLR1A (ENSSLUG00000017324)	st3gal5 (ENSSLUG00000017520)	acsl1b (ENSSLUG00000017655)	CENPU (ENSSLUG00000019849)	CASP3 (ENSSLUG00000019871)	irf2 (ENSSLUG00000020029) #22	ENSSLUG00000020041
Channel bull blenny	MODERN SPECIES	1	ENSCGOG00000016922	zgc:194679 (ENSCGOG00000021498)	il1rapl2 (ENSCGOG00000021505)	ENSCGOG00000021554	ENSCGOG00000021556	snx25 (ENSCGOG00000021570)	ENSCGOG00000021755	CNGA2 (ENSCGOG00000021759)	ENSCGOG00000021787	ptcd3 (ENSCGOG00000021907)	POLR1A (ENSCGOG00000021951)	st3gal5 (ENSCGOG00000001267)	acsl1b (ENSCGOG00000001373)	ENSCGOG00000002151	CASP3 (ENSCGOG00000002153)	irf2 (ENSCGOG00000002156) #22	ENSCGOG00000002195	ENSCGOG00000002217	ENSCGOG00000002225	SLITRK4 (ENSCGOG00000002228)	ENSCGOG00000002231	ENSCGOG00000002233	ENSCGOG00000002234	ENSCGOG00000002235	SLITRK2 (ENSCGOG00000002239)	ENSCGOG00000002244	ENSCGOG00000002245	tmem129 (ENSCGOG00000002248)	ENSCGOG00000002249	rnf103 (ENSCGOG00000002250)	abhd18 (ENSCGOG00000002258)
Cottioidei	ANCESTRAL SPECIES	9	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000159942.b	ENSGT00940000160863	ENSGT00950000183189.a.b.b	ENSGT00950000182974.a.a.a.a	ENSGT00940000156803	ENSGT00390000003924	ENSGT00940000163031.b.b	ENSGT00440000033329.b.a.b	ENSGT00390000013770	ENSGT00440000033895	ENSGT00390000000436	ENSGT00950000183059.a	ENSGT00940000153986.b.b	ENSGT00940000157743
Lumpfish	MODERN SPECIES	1	ENSCLMG00005006410	ENSCLMG00005006411	ENSCLMG00005006412	il1rapl2 (ENSCLMG00005006417)	ENSCLMG00005006918	snx25 (ENSCLMG00005006943)	ENSCLMG00005008455	CNGA2 (ENSCLMG00005008456)	ENSCLMG00005008520	ptcd3 (ENSCLMG00005008965)	POLR1A (ENSCLMG00005008969)	st3gal5 (ENSCLMG00005008996)	acsl1b (ENSCLMG00005009025)	ENSCLMG00005015053	CASP3 (ENSCLMG00005015054)	irf2 (ENSCLMG00005015056) #22	ENSCLMG00005015057	SLITRK4 (ENSCLMG00005015058)	hdac3 (ENSCLMG00005015063)	ENSCLMG00005017625	rab33a (ENSCLMG00005017629)	fmr1 (ENSCLMG00005017630)	ENSCLMG00005017637	ids (ENSCLMG00005018339)	dcps (ENSCLMG00005018340)	ENSCLMG00005018342	LONRF3 (ENSCLMG00005018346)	commd5 (ENSCLMG00005018349)	fam199x (ENSCLMG00005018351)	smim19 (ENSCLMG00005018355)	ENSCLMG00005018357
Stickleback	MODERN SPECIES	3	pwp1 (ENSGACG00000018812)	mrpl42 (ENSGACG00000018811)	ENSGACG00000018807	nudt4b (ENSGACG00000018806)	pkp2 (ENSGACG00000018804)	rassf8b (ENSGACG00000018803)	ENSGACG00000018801	PLS3 (ENSGACG00000018799)	ptcd3 (ENSGACG00000018795)	POLR1A (ENSGACG00000018791)	st3gal5 (ENSGACG00000018789)	acsl1b (ENSGACG00000018774)	CASP3 (ENSGACG00000018770)	CASP3 (ENSGACG00000018769)	CASP3 (ENSGACG00000018765)	irf2 (ENSGACG00000018763) #22	ENSGACG00000018762	ENSGACG00000018760	SLITRK4 (ENSGACG00000018757)	ENSGACG00000018756	ssr1 (ENSGACG00000018755)	HDAC3 (ENSGACG00000018752)	ENSGACG00000018748	rab33a (ENSGACG00000018745)	fmr1 (ENSGACG00000018742)	ENSGACG00000018740	ids (ENSGACG00000018736)	dcps (ENSGACG00000018734)	ENSGACG00000018733	LONRF3 (ENSGACG00000018731)	commd5 (ENSGACG00000018730)
Eupecaria_C	ANCESTRAL SPECIES	12	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248
Gilthead seabream	MODERN SPECIES	9	zgc:194679 (ENSSAUG00010018050)	il1rapl2 (ENSSAUG00010017998)	ENSSAUG00010017979	ENSSAUG00010017982	snx25 (ENSSAUG00010017173)	ENSSAUG00010017136	CNGA2 (ENSSAUG00010017135)	ENSSAUG00010017132	ENSSAUG00010016939	ptcd3 (ENSSAUG00010016732)	POLR1A (ENSSAUG00010014088)	st3gal5 (ENSSAUG00010014002)	acsl1b (ENSSAUG00010010646)	ENSSAUG00010010610	CASP3 (ENSSAUG00010010608)	irf2 (ENSSAUG00010010599) #22	ENSSAUG00010010597	ENSSAUG00010010596	ENSSAUG00010010595	SLITRK4 (ENSSAUG00010010594)	ENSSAUG00010010593	ENSSAUG00010010589	ENSSAUG00010010587	ENSSAUG00010010584	SLITRK2 (ENSSAUG00010010583)	mgst1.1 (ENSSAUG00010010581)	ENSSAUG00010010580	ENSSAUG00010010578	ENSSAUG00010010577	zgc:153146 (ENSSAUG00010010576)	gfra3 (ENSSAUG00010010574)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14	ENSGT00940000159795	ENSGT00950000183196.D.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000158507	ENSGT00940000165176	ENSGT00940000156583	ENSGT00940000163780	ENSGT00510000046787.e.b	ENSGT00390000011365.a	ENSGT00940000159047.d	ENSGT00940000159354	ENSGT00950000182938.b.b.a	ENSGT00940000158129	ENSGT00510000048167.b.b	ENSGT00390000003288	ENSGT00940000160403	ENSGT00940000155521.a.a
Large yellow croaker	MODERN SPECIES		ENSLCRG00005004214	zgc:194679 (ENSLCRG00005004209)	il1rapl2 (ENSLCRG00005003927)	ENSLCRG00005003920	snx25 (ENSLCRG00005002080)	ENSLCRG00005002016	CNGA2 (ENSLCRG00005002003)	PLS3 (ENSLCRG00005001507)	ptcd3 (ENSLCRG00005020786)	POLR1A (ENSLCRG00005020773)	st3gal5 (ENSLCRG00005020763)	acsl1b (ENSLCRG00005019755)	ENSLCRG00005019734	CASP3 (ENSLCRG00005019732)	ENSLCRG00005019731	irf2 (ENSLCRG00005019730) #22	gpc3 (ENSLCRG00005019728)	cab39l1 (ENSLCRG00005019725)	phf6 (ENSLCRG00005019721)	hprt1 (ENSLCRG00005019342)	pabir2 (ENSLCRG00005019314)	mospd1 (ENSLCRG00005019305)	ints6l (ENSLCRG00005018703)	mmgt1 (ENSLCRG00005018698)	pfdn6 (ENSLCRG00005018697)	her5 (ENSLCRG00005018696)	her11 (ENSLCRG00005018695)	fgf20b (ENSLCRG00005018693)	MICU3 (ENSLCRG00005018690)	zdhhc2 (ENSLCRG00005018565)	cnot7 (ENSLCRG00005018556)
European seabass	MODERN SPECIES	12	ENSDLAG00005013499	ENSDLAG00005008808	ENSDLAG00005008846	ENSDLAG00005008898	ENSDLAG00005008920	ENSDLAG00005009414	ENSDLAG00005010119	ENSDLAG00005010149	ENSDLAG00005010305	PTCD3 (ENSDLAG00005011664)	ENSDLAG00005011769	ST3GAL5 (ENSDLAG00005013896)	ACSL1 (ENSDLAG00005013960)	ENSDLAG00005027637	CASP3 (ENSDLAG00005015698)	irf2 (ENSDLAG00005016403) #22	ENSDLAG00005016477	ENSDLAG00005016489	ENSDLAG00005016514	mtnr1al (ENSDLAG00005016876)	ENSDLAG00005016898	atox1 (ENSDLAG00005016941)	sparc (ENSDLAG00005016959)	g3bp1 (ENSDLAG00005017164)	glra1 (ENSDLAG00005017185)	slc25a48 (ENSDLAG00005017388)	ENSDLAG00005032272	thoc3 (ENSDLAG00005017426)	ENSDLAG00005017453	ENSDLAG00005027344	ENSDLAG00005002542
Ovalentaria	ANCESTRAL SPECIES	15	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00940000177970	ENSGT00940000179542	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00940000175226
Atherinomorphae	ANCESTRAL SPECIES	9	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00940000177970	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00940000175226	ENSGT00390000006550 #25
Cyprinodontiformes	ANCESTRAL SPECIES	8	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000182912.b.a.a.b.b.a.a.a	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951
Aplocheiloidei	ANCESTRAL SPECIES	69	ENSGT00940000159795	ENSGT00950000183196.D.b.s.a	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000159225	ENSGT00390000005922.b	ENSGT00390000002932	ENSGT00940000175899	ENSGT00940000170279	ENSGT00990000203833	ENSGT00940000154953.a	ENSGT00940000155249.h	ENSGT00940000156295.h	ENSGT00940000158457 #23	ENSGT00390000012030.b.a	ENSGT00390000013163	ENSGT00940000158277.a	ENSGT00980000198976	ENSGT00390000008738
Mangrove rivulus	MODERN SPECIES	69	ENSKMAG00000006993	ENSKMAG00000007005	ENSKMAG00000007029	ENSKMAG00000007085	snx25 (ENSKMAG00000007155)	ENSKMAG00000007240	CNGA2 (ENSKMAG00000007260)	PLS3 (ENSKMAG00000007299)	ptcd3 (ENSKMAG00000007351)	POLR1A (ENSKMAG00000007399)	ENSKMAG00000007487	st3gal5 (ENSKMAG00000007514)	acsl1b (ENSKMAG00000007568)	ENSKMAG00000007660	CASP3 (ENSKMAG00000007682)	irf2 (ENSKMAG00000007697) #22	nkx1.2lb (ENSKMAG00000007712)	uvssa (ENSKMAG00000007728)	ENSKMAG00000007754	spdl1 (ENSKMAG00000007771)	trappc11 (ENSKMAG00000007799) #25	ENSKMAG00000007899	ENSKMAG00000007919	ENSKMAG00000007957	zgc:154054 (ENSKMAG00000007981)	setd7 (ENSKMAG00000008025)	mmadhcb (ENSKMAG00000008048)	FGF4 (ENSKMAG00000008061)	abhd18 (ENSKMAG00000008085)	ENSKMAG00000008142	immt (ENSKMAG00000008165)
Turquoise killifish	MODERN SPECIES	1610	CCRN4L (ENSNFUG00015015817)	ENSNFUG00015015823	ENSNFUG00015015831	ENSNFUG00015015833	ENSNFUG00015015840	mlsl (ENSNFUG00015015865)	HARS (ENSNFUG00015016034)	SLC7A11 (ENSNFUG00015016832)	SLITRK4 (ENSNFUG00015016929)	ENSNFUG00015016934	ENSNFUG00015016936	ENSNFUG00015016950	ENSNFUG00015016956	ENSNFUG00015016959	ENSNFUG00015000040	irf2 (ENSNFUG00015000042) #22	CASP3 (ENSNFUG00015000043)	ENSNFUG00015000044	st3gal5 (ENSNFUG00015000045)	ENSNFUG00015000046	ENSNFUG00015000048	PTCD3 (ENSNFUG00015000051)	PLS3 (ENSNFUG00015000133)	ENSNFUG00015000380	ENSNFUG00015000388	SNX25 (ENSNFUG00015000482)	ENSNFUG00015000747	ENSNFUG00015000751	ANKHD1 (ENSNFUG00015000802)	HNRNPH1L (ENSNFUG00015001127)	RUFY1 (ENSNFUG00015001150)
Cyprinodontoidei	ANCESTRAL SPECIES	19	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000182912.b.a.a.b.b.a.a.a.k	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25	ENSGT00510000047951
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000182912.b.a.a.b.b.a.a.a.k	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.gb	ENSGT00390000008828.fb.a	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00390000006550 #25
Poecilia	ANCESTRAL SPECIES	21	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b.a	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22
NAME_6	ANCESTRAL SPECIES	281	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b.c	ENSGT00940000155374.g.b.d	ENSGT00950000183097.a.a.a.f.a.b.b	ENSGT00950000183097.a.a.a.f.a.b.a	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22
Amazon molly	MODERN SPECIES	539	il1rapl2 (ENSPFOG00000002940)	ENSPFOG00000019906	ENSPFOG00000023692	snx25 (ENSPFOG00000003004)	ENSPFOG00000003450	CNGA2 (ENSPFOG00000003547)	ENSPFOG00000003625	CNGA2 (ENSPFOG00000003791)	PLS3 (ENSPFOG00000004000)	ptcd3 (ENSPFOG00000004442)	POLR1A (ENSPFOG00000005025)	st3gal5 (ENSPFOG00000005856)	acsl1b (ENSPFOG00000005887)	ENSPFOG00000023428	CASP3 (ENSPFOG00000006427)	irf2 (ENSPFOG00000006505) #22
Sailfin molly	MODERN SPECIES	1776												st3gal5 (ENSPLAG00000023507)	acsl1b (ENSPLAG00000023479)	ENSPLAG00000023395	CASP3 (ENSPLAG00000023382)	irf2 (ENSPLAG00000000798) #22	tmem129 (ENSPLAG00000022791)
Guppy	MODERN SPECIES	440	ENSPREG00000003122	ENSPREG00000003093	ENSPREG00000003086	zgc:194679 (ENSPREG00000003078)	il1rapl2 (ENSPREG00000003053)	ENSPREG00000003010	snx25 (ENSPREG00000002955)	ENSPREG00000002940	CNGA2 (ENSPREG00000002728)	ENSPREG00000002649	ptcd3 (ENSPREG00000002536)	POLR1A (ENSPREG00000002389)	st3gal5 (ENSPREG00000002326)	acsl1b (ENSPREG00000001208)	CASP3 (ENSPREG00000000979)	irf2 (ENSPREG00000000957) #22	hspa9 (ENSPREG00000000896)	rab33ba (ENSPREG00000000880)	zgc:113425 (ENSPREG00000000833)	setd7 (ENSPREG00000000786)	mgst2 (ENSPREG00000000761)	SCOC (ENSPREG00000000748)	ENSPREG00000000707	ENSPREG00000000560	ENSPREG00000022451	ENSPREG00000022439	ENSPREG00000022432	ENSPREG00000022424	trappc11 (ENSPREG00000022390) #25	ENSPREG00000022373	ENSPREG00000022370
Platyfish	MODERN SPECIES	15	ENSXMAG00000023822	ENSXMAG00000003861	ENSXMAG00000003895	il1rapl2 (ENSXMAG00000003898)	ENSXMAG00000027917	snx25 (ENSXMAG00000003919)	ENSXMAG00000003939	CNGA2 (ENSXMAG00000003954)	ENSXMAG00000003965	ptcd3 (ENSXMAG00000004008)	POLR1A (ENSXMAG00000004032)	st3gal5 (ENSXMAG00000004033)	acsl1b (ENSXMAG00000004037)	ENSXMAG00000004064	CASP3 (ENSXMAG00000004066)	irf2 (ENSXMAG00000004071) #22	ENSXMAG00000025701	ENSXMAG00000023422	ENSXMAG00000022702	ENSXMAG00000028373	SLITRK4 (ENSXMAG00000019653)	ENSXMAG00000027484	ENSXMAG00000025574	SLITRK2 (ENSXMAG00000013810)	ENSXMAG00000021555	ENSXMAG00000021493	ENSXMAG00000028509	ENSXMAG00000024492	ENSXMAG00000024802	ENSXMAG00000019683	hspa9 (ENSXMAG00000004114)
NAME_4	ANCESTRAL SPECIES	301					ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22
Mummichog	MODERN SPECIES	542					ENSFHEG00000005747	snx25 (ENSFHEG00000005809)	ENSFHEG00000005817	CNGA2 (ENSFHEG00000005861)	ENSFHEG00000005892	ptcd3 (ENSFHEG00000005903)	POLR1A (ENSFHEG00000005996)	st3gal5 (ENSFHEG00000006008)	ACSL1 (ENSFHEG00000006136)	ENSFHEG00000006158	CASP3 (ENSFHEG00000006169)	IRF2 (ENSFHEG00000006198) #22
Sheepshead minnow	MODERN SPECIES	578							snx25 (ENSCVAG00000020558)	ENSCVAG00000020570	CNGA2 (ENSCVAG00000020753)	PLS3 (ENSCVAG00000020799)	ptcd3 (ENSCVAG00000020820)	POLR1A (ENSCVAG00000020941)	st3gal5 (ENSCVAG00000021018)	acsl1b (ENSCVAG00000021062)	CASP3 (ENSCVAG00000021213)	irf2 (ENSCVAG00000021228) #22
Oryzias	ANCESTRAL SPECIES	17	ENSGT00940000159795	ENSGT00950000183196.D.b.s.a	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00940000177970	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00940000175226	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b
Oryzias_b	ANCESTRAL SPECIES	47	ENSGT00940000159795	ENSGT00950000183196.D.b.s.a	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248	ENSGT00920000149123.d	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000156526.b	ENSGT00940000159799	ENSGT00940000177970	ENSGT00510000046732.B	ENSGT00940000160541	ENSGT00940000175226	ENSGT00390000006550 #25	ENSGT00510000047951	ENSGT00940000153909.b
Indian medaka	MODERN SPECIES	16	il1rapl2 (ENSOMEG00000018927)	ENSOMEG00000018962	ENSOMEG00000018976	snx25 (ENSOMEG00000019024)	ENSOMEG00000019044	CNGA2 (ENSOMEG00000019128)	ENSOMEG00000019192	ptcd3 (ENSOMEG00000019243)	ENSOMEG00000019264	ENSOMEG00000019310	st3gal5 (ENSOMEG00000019360)	acsl1b (ENSOMEG00000019529)	ENSOMEG00000019594	CASP3 (ENSOMEG00000000518)	ENSOMEG00000019622	irf2 (ENSOMEG00000019662) #22	SLITRK4 (ENSOMEG00000019675)	SLITRK2 (ENSOMEG00000019685)
Javanese ricefish	MODERN SPECIES	1	SLITRK2 (ENSOJAG00000005168)	ENSOJAG00000005238	ENSOJAG00000005247	ENSOJAG00000005280	il1rapl2 (ENSOJAG00000005469)	ENSOJAG00000005717	snx25 (ENSOJAG00000005992)	ENSOJAG00000007869	CNGA2 (ENSOJAG00000007884)	ENSOJAG00000007936	ptcd3 (ENSOJAG00000008304)	st3gal5 (ENSOJAG00000010205)	acsl1b (ENSOJAG00000010550)	ENSOJAG00000014160	CASP3 (ENSOJAG00000014186)	irf2 (ENSOJAG00000014196) #22	ENSOJAG00000014203	SLITRK4 (ENSOJAG00000014208)	ENSOJAG00000014211	ENSOJAG00000014249	ENSOJAG00000014443	ENSOJAG00000014557	ENSOJAG00000014627	ENSOJAG00000014676	ENSOJAG00000014935	rab33a (ENSOJAG00000015066)	fmr1 (ENSOJAG00000015156)	ENSOJAG00000016360	ids (ENSOJAG00000016385)	dcps (ENSOJAG00000001563)	ENSOJAG00000001595
Oryzias_a	ANCESTRAL SPECIES	47	ENSGT00940000159795	ENSGT00950000183196.D.b.s.a	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000164070.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000161248
Chinese medaka	MODERN SPECIES	1058	ENSOSIG00000014808	ENSOSIG00000014803	ENSOSIG00000014801	ENSOSIG00000014798	il1rapl2 (ENSOSIG00000014216)	ENSOSIG00000014211	snx25 (ENSOSIG00000013855)	ENSOSIG00000013843	CNGA2 (ENSOSIG00000013839)	ENSOSIG00000013835	POLR1A (ENSOSIG00000013709)	st3gal5 (ENSOSIG00000013695)	acsl1b (ENSOSIG00000005820)	ENSOSIG00000005752	CASP3 (ENSOSIG00000005751)	irf2 (ENSOSIG00000005749) #22
Japanese Medaka HdrR	MODERN SPECIES	1	ENSORLG00000008975	ENSORLG00000008968	il1rapl2 (ENSORLG00000030351)	ENSORLG00000028262	ENSORLG00000027299	snx25 (ENSORLG00000008915)	ENSORLG00000008878	ENSORLG00000008864	ENSORLG00000008846	ptcd3 (ENSORLG00000008776)	POLR1A (ENSORLG00000008753)	st3gal5 (ENSORLG00000008671)	acsl1b (ENSORLG00000008655)	ENSORLG00000008617	casp3 (ENSORLG00000008601)	irf2 (ENSORLG00000008574) #22	ENSORLG00000027592	ENSORLG00000028405	SLITRK4 (ENSORLG00000008548)	ENSORLG00000024092	ENSORLG00000022572	SLITRK2 (ENSORLG00000008527)	ENSORLG00000029951	rps6kal (ENSORLG00000008496)	ENSORLG00000008450	ENSORLG00000008411	agtr2 (ENSORLG00000008388)	ENSORLG00000022209	TENM1 (ENSORLG00000008374) ##34	arhgef9b (ENSORLG00000008324)	asb12b (ENSORLG00000008287)
Ovalentaria_B	ANCESTRAL SPECIES	13	ENSGT00950000183196.D.b.s.b	ENSGT00950000183196.D.b.t	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971
Pomacentridae	ANCESTRAL SPECIES	4	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971
Pomacentridae_A	ANCESTRAL SPECIES	119	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22	ENSGT00940000160971
Amphiprion	ANCESTRAL SPECIES	143	ENSGT00950000183196.D.b.s.a	ENSGT00950000183196.D.b.s.b	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063 #22
Clown anemonefish	MODERN SPECIES	1997					ENSAOCG00000002271	snx25 (ENSAOCG00000017056)	ENSAOCG00000017068	CNGA2 (ENSAOCG00000002772)	PLS3 (ENSAOCG00000001190)	ptcd3 (ENSAOCG00000017186)	POLR1A (ENSAOCG00000017336)	st3gal5 (ENSAOCG00000017359)	acsl1b (ENSAOCG00000017472)	ENSAOCG00000017509	CASP3 (ENSAOCG00000017527)	irf2 (ENSAOCG00000017552) #22
Orange clownfish	MODERN SPECIES	4	ENSAPEG00000015628	ENSAPEG00000015667	ENSAPEG00000015758	zgc:194679 (ENSAPEG00000015793)	il1rapl2 (ENSAPEG00000015812)	ENSAPEG00000015913	snx25 (ENSAPEG00000015944)	ENSAPEG00000015969	CNGA2 (ENSAPEG00000015986)	PLS3 (ENSAPEG00000016033)	ptcd3 (ENSAPEG00000016069)	POLR1A (ENSAPEG00000016105)	st3gal5 (ENSAPEG00000016265)	acsl1b (ENSAPEG00000016272)	CASP3 (ENSAPEG00000016357)	irf2 (ENSAPEG00000016373) #22	ENSAPEG00000016407	SLITRK4 (ENSAPEG00000016469)	cep162 (ENSAPEG00000016499)	FBXO38 (ENSAPEG00000016604)	csnk1a1 (ENSAPEG00000016642)	STOX2 (ENSAPEG00000016675) #24	enpp6 (ENSAPEG00000016718) #23	ENSAPEG00000016728	hspa14 (ENSAPEG00000016756)	prl2 (ENSAPEG00000016769)	rint1 (ENSAPEG00000016798)	magt1 (ENSAPEG00000016820)	igbp1 (ENSAPEG00000016831)	serpine3 (ENSAPEG00000016881)	igbp1 (ENSAPEG00000016938)
Spiny chromis	MODERN SPECIES	1232													st3gal5 (ENSAPOG00000002017)	acsl1b (ENSAPOG00000001963)	CASP3 (ENSAPOG00000001902)	irf2 (ENSAPOG00000000034) #22
Bicolor damselfish	MODERN SPECIES	2190												st3gal5 (ENSSPAG00000012825)	acsl1b (ENSSPAG00000012767)	ENSSPAG00000012733	CASP3 (ENSSPAG00000012714)	irf2 (ENSSPAG00000012702) #22
Cichlidae	ANCESTRAL SPECIES	8	ENSGT00950000183196.D.b.s.a	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000178166	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00940000158507	ENSGT00940000165176	ENSGT00940000156583	ENSGT00940000163780	ENSGT00510000046787.e.b	ENSGT00390000011365.a	ENSGT00940000159047.d	ENSGT00940000159354	ENSGT00950000182938.b.b.a	ENSGT00940000158129	ENSGT00940000177647	ENSGT00980000198740	ENSGT00510000048167.b.b	ENSGT00390000003288
Pseudocrenilabrinae	ANCESTRAL SPECIES	17	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.e	ENSGT00940000153232.a.b.b.f	ENSGT00940000178166	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000183088.a.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT01050000244840.A.b.a	ENSGT00940000157465	ENSGT00940000158554	ENSGT00940000177214	ENSGT00390000002781	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	20	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.e	ENSGT00940000153232.a.b.b.f	ENSGT00940000178166	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000183088.a.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT01050000244840.A.b.a	ENSGT00940000157465	ENSGT00940000158554	ENSGT00940000177214	ENSGT00390000002781	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT00920000149123.d
Haplochromini	ANCESTRAL SPECIES	14	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.e	ENSGT00940000153232.a.b.b.f	ENSGT00940000178166	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000183088.a.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT01050000244840.A.b.a	ENSGT00940000157465	ENSGT00940000158554	ENSGT00940000177214	ENSGT00390000002781	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT00920000149123.d
Haplochromini_A	ANCESTRAL SPECIES	13	ENSGT01090000260076.b.a	ENSGT00940000177201	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b.e	ENSGT00940000153232.a.b.b.f	ENSGT00940000178166	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000183088.a.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT01050000244840.A.b.a	ENSGT00940000157465	ENSGT00940000158554	ENSGT00940000177214	ENSGT00390000002781	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT00920000149123.d
P. nyererei	MODERN SPECIES	296	zgc:194679 (ENSPNYG00000000035)	il1rapl2 (ENSPNYG00000000034)	ENSPNYG00000000033	snx25 (ENSPNYG00000000032)	ENSPNYG00000000031	CNGA2 (ENSPNYG00000000030)	PLS3 (ENSPNYG00000000029)	ptcd3 (ENSPNYG00000000028)	POLR1A (ENSPNYG00000000026)	st3gal5 (ENSPNYG00000000025)	acsl1b (ENSPNYG00000000024)	ENSPNYG00000000023	CASP3 (ENSPNYG00000000022)	CASP3 (ENSPNYG00000000021)	ENSPNYG00000000020	irf2 (ENSPNYG00000000019) #22	ENSPNYG00000000018	ENSPNYG00000000017	ENSPNYG00000000016	SLITRK4 (ENSPNYG00000000015)	ARHGEF37 (ENSPNYG00000000013)	ENSPNYG00000000012	ARAP3 (ENSPNYG00000000011)	rnf130 (ENSPNYG00000000010)	TBC1D9B (ENSPNYG00000000009)	ENSPNYG00000000008	sqstm1 (ENSPNYG00000000007)	ENSPNYG00000000006	selenot2 (ENSPNYG00000000005)	COX18 (ENSPNYG00000000004)	igfbp7 (ENSPNYG00000000003)
Haplochromini_B	ANCESTRAL SPECIES	7	ENSGT00950000183196.D.b.s.a	ENSGT00940000163421.a.d.b	ENSGT01090000260076.b.a	ENSGT00390000015084.c.b	ENSGT00950000182856.a.a.b	ENSGT00940000163551.i.a	ENSGT00940000155374.g.b	ENSGT00950000183097.a.a.a.f.a.b	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000154508.a.a.s.b	ENSGT00940000153232.a.b.b.e	ENSGT00940000153232.a.b.b.f	ENSGT00940000178166	ENSGT00940000159063 #22	ENSGT00940000160971	ENSGT00950000183088.a.a	ENSGT00940000164810	ENSGT00940000158869	ENSGT01050000244840.A.b.a	ENSGT00940000157465	ENSGT00940000158554	ENSGT00940000177214	ENSGT00390000002781	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT00920000149123.d
Eastern happy	MODERN SPECIES	11	zgc:194679 (ENSACLG00000021224)	il1rapl2 (ENSACLG00000021101)	ENSACLG00000021049	ENSACLG00000020979	snx25 (ENSACLG00000020812)	ENSACLG00000020795	CNGA2 (ENSACLG00000020745)	PLS3 (ENSACLG00000020687)	ptcd3 (ENSACLG00000020653)	POLR1A (ENSACLG00000020541)	st3gal5 (ENSACLG00000020476)	acsl1b (ENSACLG00000020416)	CASP3 (ENSACLG00000020222)	ENSACLG00000019937	ENSACLG00000019904	irf2 (ENSACLG00000019528) #22	ENSACLG00000019498	ENSACLG00000019470	ENSACLG00000019409	ENSACLG00000019375	ENSACLG00000019334	ENSACLG00000019283	SLITRK4 (ENSACLG00000019274)	ENSACLG00000019219	ARHGEF37 (ENSACLG00000019191)	ENSACLG00000019142	ARAP3 (ENSACLG00000019097)	F2RL3 (ENSACLG00000019065)	rnf130 (ENSACLG00000019055)	TBC1D9B (ENSACLG00000018821)	ENSACLG00000018802
Zebra mbuna	MODERN SPECIES	1102	ENSMZEG00005005251	zgc:194679 (ENSMZEG00005005233)	il1rapl2 (ENSMZEG00005005183)	ENSMZEG00005005145	snx25 (ENSMZEG00005005079)	ENSMZEG00005005063	CNGA2 (ENSMZEG00005005046)	PLS3 (ENSMZEG00005005009)	ptcd3 (ENSMZEG00005004980)	POLR1A (ENSMZEG00005004915)	st3gal5 (ENSMZEG00005004905)	acsl1b (ENSMZEG00005004849)	CASP3 (ENSMZEG00005004833)	ENSMZEG00005004823	ENSMZEG00005004814	irf2 (ENSMZEG00005004806) #22	SLITRK2 (ENSMZEG00005004787)	ENSMZEG00005004777	ENSMZEG00005004766	ENSMZEG00005004748	ENSMZEG00005004736	ENSMZEG00005004723	FAT2 (ENSMZEG00005004584)	mtnr1al (ENSMZEG00005004554)	SLC36A1 (ENSMZEG00005004521)	atox1 (ENSMZEG00005004498)	sparc (ENSMZEG00005004476)	lman2 (ENSMZEG00005004451)	HTR4 (ENSMZEG00005004414)	SLC26A2 (ENSMZEG00005004404)	pde6a (ENSMZEG00005004347)
Burton s mouthbrooder	MODERN SPECIES	678					ENSHBUG00000020322	snx25 (ENSHBUG00000020302)	ENSHBUG00000020233	CNGA2 (ENSHBUG00000000614)	PLS3 (ENSHBUG00000020121)	ptcd3 (ENSHBUG00000020056)	POLR1A (ENSHBUG00000020021)	st3gal5 (ENSHBUG00000019930)	acsl1b (ENSHBUG00000019902)	CASP3 (ENSHBUG00000019811)	ENSHBUG00000018862	irf2 (ENSHBUG00000018850) #22	ENSHBUG00000018843
Lyretail cichlid	MODERN SPECIES	292	ENSNBRG00000022407	ENSNBRG00000000226	zgc:194679 (ENSNBRG00000000236)	il1rapl2 (ENSNBRG00000000241)	snx25 (ENSNBRG00000000270)	ENSNBRG00000000303	ENSNBRG00000000312	CNGA2 (ENSNBRG00000000349)	PLS3 (ENSNBRG00000000385)	ptcd3 (ENSNBRG00000000447)	POLR1A (ENSNBRG00000000519)	st3gal5 (ENSNBRG00000000543)	acsl1b (ENSNBRG00000000551)	CASP3 (ENSNBRG00000000621)	ENSNBRG00000000629	irf2 (ENSNBRG00000000706) #22	ENSNBRG00000000719	ENSNBRG00000000747	SLITRK4 (ENSNBRG00000000772)	ENSNBRG00000000775	ARHGEF37 (ENSNBRG00000000798)	ENSNBRG00000000860	ENSNBRG00000000921	F2RL3 (ENSNBRG00000000934)	rnf130 (ENSNBRG00000000957)	TBC1D9B (ENSNBRG00000001033)	sqstm1 (ENSNBRG00000001087)	ENSNBRG00000001098	selenot2 (ENSNBRG00000001150)	COX18 (ENSNBRG00000001173)	igfbp7 (ENSNBRG00000001223)
Nile tilapia	MODERN SPECIES	11	ENSONIG00000015844	zgc:194679 (ENSONIG00000015860)	il1rapl2 (ENSONIG00000015862)	ENSONIG00000038615	ENSONIG00000037161	snx25 (ENSONIG00000015865)	ENSONIG00000015872	CNGA2 (ENSONIG00000015875)	PLS3 (ENSONIG00000015882)	ptcd3 (ENSONIG00000015886)	POLR1A (ENSONIG00000015895)	st3gal5 (ENSONIG00000028210)	acsl1b (ENSONIG00000015904)	ENSONIG00000030573	ENSONIG00000015916	irf2 (ENSONIG00000015919) #22	ENSONIG00000040082	ENSONIG00000028932	ENSONIG00000033050	ENSONIG00000038370	SLITRK4 (ENSONIG00000020803)	ENSONIG00000038694	ENSONIG00000038800	ENSONIG00000034229	ENSONIG00000041215	ENSONIG00000037551	ENSONIG00000000067	ENSONIG00000028462	ENSONIG00000041217	ENSONIG00000033685	ENSONIG00000000118
Midas cichlid	MODERN SPECIES	920	zgc:194679 (ENSACIG00000022391)	il1rapl2 (ENSACIG00000022368)	ENSACIG00000022358	snx25 (ENSACIG00000022335)	ENSACIG00000022319	CNGA2 (ENSACIG00000022304)	PLS3 (ENSACIG00000022285)	ptcd3 (ENSACIG00000022263)	POLR1A (ENSACIG00000022147)	ENSACIG00000022124	st3gal5 (ENSACIG00000022086)	acsl1b (ENSACIG00000022051)	CASP3 (ENSACIG00000021517)	CASP3 (ENSACIG00000021472)	ENSACIG00000021456	irf2 (ENSACIG00000021150) #22
Tiger tail seahorse	MODERN SPECIES	175	fnta (ENSHCOG00000003562)	aup1 (ENSHCOG00000003550)	ctsf (ENSHCOG00000003523)	eif1ad (ENSHCOG00000003468)	ENSHCOG00000003456	ENSHCOG00000003451	CNGA2 (ENSHCOG00000003439)	ENSHCOG00000003415	PLS3 (ENSHCOG00000003390)	ptcd3 (ENSHCOG00000003368)	POLR1A (ENSHCOG00000003345)	st3gal5 (ENSHCOG00000003283)	acsl1b (ENSHCOG00000003272)	ENSHCOG00000003230	CASP3 (ENSHCOG00000003219)	irf2 (ENSHCOG00000003204) #22	ENSHCOG00000000097	ENSHCOG00000003178	ENSHCOG00000003170	ENSHCOG00000003161	FABP6 (ENSHCOG00000003144)	ENSHCOG00000003140	ccnjl (ENSHCOG00000003130)	C1QTNF2 (ENSHCOG00000003125)	slu7 (ENSHCOG00000003110)	ENSHCOG00000003074	ENSHCOG00000003040	si:ch1073-44g3.1 (ENSHCOG00000003032)	atp5po (ENSHCOG00000003024)	OGT (ENSHCOG00000003016)	rhogd (ENSHCOG00000002982)
Pinecone sodierfish	MODERN SPECIES	1	zdhhc5b (ENSMMDG00005009190)	clp1 (ENSMMDG00005009192)	ENSMMDG00005009196	ENSMMDG00005009198	ENSMMDG00005009202	rtn4rl2b (ENSMMDG00005009209)	ENSMMDG00005009212	CNGA2 (ENSMMDG00005009220)	ENSMMDG00005009245	ptcd3 (ENSMMDG00005009438)	POLR1A (ENSMMDG00005009660)	st3gal5 (ENSMMDG00005009755)	acsl1b (ENSMMDG00005009859)	ENSMMDG00005014564	CASP3 (ENSMMDG00005014568)	irf2 (ENSMMDG00005014571) #22	ENSMMDG00005014590	ENSMMDG00005014593	ENSMMDG00005014598	ENSMMDG00005014600	SLITRK4 (ENSMMDG00005014602)	SLITRK2 (ENSMMDG00005014604)	ENSMMDG00005014607	ENSMMDG00005014609	hspa9 (ENSMMDG00005014634)	zgc:154054 (ENSMMDG00005015438)	SCOC (ENSMMDG00005015469)	ENSMMDG00005015474	mgst2 (ENSMMDG00005015476)	mgst2 (ENSMMDG00005015489)	mgst2 (ENSMMDG00005015490)
Cod	MODERN SPECIES	1	ENSGMOG00000034785	ENSGMOG00000005719	ENSGMOG00000005724	ENSGMOG00000026939	ENSGMOG00000026233	ENSGMOG00000002422	ENSGMOG00000002377	PTCD3 (ENSGMOG00000002324)	ENSGMOG00000002230	ST3GAL5 (ENSGMOG00000002192)	ACSL1 (ENSGMOG00000002152)	ENSGMOG00000033721	CASP3 (ENSGMOG00000016710)	CASP3 (ENSGMOG00000035959)	CASP3 (ENSGMOG00000033551)	irf2 (ENSGMOG00000016692) #22	snx25 (ENSGMOG00000005477)	ENSGMOG00000036878	ENSGMOG00000002901	ENSGMOG00000036718	ENSGMOG00000001600	ENSGMOG00000001585	ENSGMOG00000001416	ENSGMOG00000031581	ENSGMOG00000006189	ENSGMOG00000036873	fmr1 (ENSGMOG00000006141)	ENSGMOG00000006067	ids (ENSGMOG00000006046)	ENSGMOG00000006034	ENSGMOG00000033793
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	384				ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00520000055589.d.b #24	ENSGT00940000163251.b.j	ENSGT00520000055589.d.a.a #24	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b
Clupeiformes	ANCESTRAL SPECIES	20	ENSGT00940000156526.a	ENSGT00390000002781	ENSGT01030000237568	ENSGT00920000149138	ENSGT00390000016876	ENSGT00390000002313	ENSGT00390000006413	ENSGT00390000014635	ENSGT00390000006550 #25	ENSGT00940000163251.b.i	ENSGT00940000163251.b.j	ENSGT00520000055589.d.a.a #24	ENSGT00940000154508.a.a.s.b	ENSGT00390000015511	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b.e	ENSGT00390000013490	ENSGT00390000010980	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a	ENSGT00940000165075.a.b	ENSGT00940000160001	ENSGT00940000158095	ENSGT00390000008984	ENSGT00940000167088	ENSGT00390000008458
Denticle herring	MODERN SPECIES	9	ccna2 (ENSDCDG00000010811)	bbs7 (ENSDCDG00000010792)	anxa5a (ENSDCDG00000009802)	ENSDCDG00000009756	prom1a (ENSDCDG00000008950)	TAPT1 (ENSDCDG00000006039)	FAM193B (ENSDCDG00000005653)	DDX41 (ENSDCDG00000028280)	ENSDCDG00000028265	atoh1b (ENSDCDG00000028264)	unc5a (ENSDCDG00000025888)	pdlim7 (ENSDCDG00000025797)	CLTB (ENSDCDG00000025792)	higd2a (ENSDCDG00000025791)	CASP3 (ENSDCDG00000024909)	irf2 (ENSDCDG00000024849) #22	enpp6 (ENSDCDG00000024838) #23	snx25 (ENSDCDG00000024003)	zgc:153146 (ENSDCDG00000023995)	PDLIM3 (ENSDCDG00000023992)	SORBS2 (ENSDCDG00000023982)	ENSDCDG00000023979	cyp4v2b (ENSDCDG00000023966)	MTNR1A (ENSDCDG00000023964)	FAT1 (ENSDCDG00000023960)	egr1 (ENSDCDG00000023957)	reep2 (ENSDCDG00000023953)	ENSDCDG00000021553	BBS12 (ENSDCDG00000021513)	fgf2 (ENSDCDG00000021510)	nudt6 (ENSDCDG00000021508)
Atlantic herring	MODERN SPECIES	12	ENSCHAG00000022301	ENSCHAG00000022276	cryba1l1 (ENSCHAG00000022258)	ARSI (ENSCHAG00000022223)	ENSCHAG00000022204	trappc11 (ENSCHAG00000021995) #25	ENSCHAG00000021969	ENSCHAG00000021933	ENSCHAG00000021867	ENSCHAG00000021768	ENSCHAG00000021756	STOX2 (ENSCHAG00000021748) #24	acsl1b (ENSCHAG00000019998)	ENSCHAG00000019938	CASP3 (ENSCHAG00000019933)	irf2 (ENSCHAG00000019930) #22	enpp6 (ENSCHAG00000019889) #23	enpp6 (ENSCHAG00000019844) #23	snx25 (ENSCHAG00000019486)	lrp2bp (ENSCHAG00000019471)	zgc:153146 (ENSCHAG00000019457)	pdlim3b (ENSCHAG00000019424)	SORBS2 (ENSCHAG00000019380)	ENSCHAG00000019356	cyp4v2b (ENSCHAG00000018987)	MTNR1A (ENSCHAG00000018970)	FAT1 (ENSCHAG00000018132)	egr1 (ENSCHAG00000018072)	reep2 (ENSCHAG00000018059)	KDM3B (ENSCHAG00000014832)	BBS12 (ENSCHAG00000014760)
Otophysi	ANCESTRAL SPECIES	43	ENSGT00940000164405	ENSGT00940000167002	ENSGT00940000159651	ENSGT00940000166497	ENSGT00950000183135.B.a.b	ENSGT00940000167144	ENSGT00940000159024	ENSGT00940000157266.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00950000183035.b.e.a	ENSGT00940000164838.f	ENSGT00390000015511	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00910000144269	ENSGT00550000074935	ENSGT00940000163435	ENSGT00940000162460.s	ENSGT01060000248588.a.c.b	ENSGT00940000165492.a.b
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00940000164405	ENSGT00940000167002	ENSGT00940000159651	ENSGT00940000166497	ENSGT00950000183135.B.a.b	ENSGT00940000167144	ENSGT00940000159024	ENSGT00940000157266.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00950000183035.b.e.a	ENSGT00940000164838.f	ENSGT00390000015511	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00550000074935	ENSGT00910000144269	ENSGT00390000007135	ENSGT01030000234566.e.b.a.b.c.a ##34	ENSGT00940000161394	ENSGT00390000010980	ENSGT00940000156741	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b	ENSGT00940000157733.a.a
Channel catfish	MODERN SPECIES	27	ENSIPUG00000020212	pcgf1 (ENSIPUG00000020218)	lbx1 (ENSIPUG00000020237)	nanos1 (ENSIPUG00000020252)	AP1AR (ENSIPUG00000020283)	GABRA4 (ENSIPUG00000020334)	ENSIPUG00000020363	GUF1 (ENSIPUG00000020387)	GNPDA1 (ENSIPUG00000020441)	ENSIPUG00000020461	ENSIPUG00000020480	ENSIPUG00000020485	ENSIPUG00000020496	cenpu (ENSIPUG00000020497)	casp3b (ENSIPUG00000020515)	irf2 (ENSIPUG00000020557) #22	enpp6 (ENSIPUG00000020567) #23	snx25 (ENSIPUG00000020587)	lrp2bp (ENSIPUG00000020645)	ENSIPUG00000020661	loxl3a (ENSIPUG00000020664)	tufm (ENSIPUG00000020682)	ENSIPUG00000020840	ENSIPUG00000020843	fnta (ENSIPUG00000020862)	pigg (ENSIPUG00000020872)	hmmr (ENSIPUG00000020944)	TENM2 (ENSIPUG00000021003) ##34	ENSIPUG00000021109	c8h4orf47 (ENSIPUG00000021123)	pdlim3b (ENSIPUG00000021148)
Characiphysae_b	ANCESTRAL SPECIES	7	ENSGT00940000164405	ENSGT00940000167002	ENSGT00940000159651	ENSGT00940000166497	ENSGT00950000183135.B.a.b	ENSGT00940000167144	ENSGT00940000159024	ENSGT00940000157266.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00950000183035.b.e.a	ENSGT00940000164838.f	ENSGT00390000015511	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00550000074935	ENSGT00910000144269	ENSGT00390000007135	ENSGT01100000266504	ENSGT01030000234566.e.b.a.b.c.a ##34	ENSGT00940000161394	ENSGT00390000010980	ENSGT00940000156741	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b
Electric eel	MODERN SPECIES	12	tlx2 (ENSEEEG00000016089)	npm1b (ENSEEEG00000016088)	fgf24 (ENSEEEG00000016056)	ENSEEEG00000016048	pcgf1 (ENSEEEG00000016039)	lbx2 (ENSEEEG00000016036)	nanos1 (ENSEEEG00000016035)	ap1ar (ENSEEEG00000016033)	gabra4 (ENSEEEG00000016030)	ENSEEEG00000016025	GUF1 (ENSEEEG00000015858)	GNPDA2 (ENSEEEG00000015852)	ENSEEEG00000015851	ENSEEEG00000015849	CASP3 (ENSEEEG00000015846)	irf2 (ENSEEEG00000015844) #22	enpp6 (ENSEEEG00000015839) #23	snx25 (ENSEEEG00000015562)	lrp2bp (ENSEEEG00000015544)	fnta (ENSEEEG00000015535)	PIGG (ENSEEEG00000015532)	hmmr (ENSEEEG00000015530)
Characoidei	ANCESTRAL SPECIES	2	ENSGT00940000164405	ENSGT00940000167002	ENSGT00940000159651	ENSGT00940000166497	ENSGT00950000183135.B.a.b	ENSGT00940000167144	ENSGT00940000159024	ENSGT00940000157266.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00950000183035.b.e.a	ENSGT00940000164838.f	ENSGT00390000015511	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00550000074935	ENSGT00910000144269	ENSGT00390000007135	ENSGT01100000266504	ENSGT01030000234566.e.b.a.b.c.a ##34	ENSGT00940000161394	ENSGT00390000010980	ENSGT00940000156741	ENSGT00940000157056.b	ENSGT00530000063727.B	ENSGT00940000157278.t	ENSGT00940000160321.c.b
Red-bellied piranha	MODERN SPECIES	97	fgf24 (ENSPNAG00000025510)	pcgf1 (ENSPNAG00000006700)	lbx2 (ENSPNAG00000025424)	nanos1 (ENSPNAG00000004874)	ap1ar (ENSPNAG00000025344)	gabra4 (ENSPNAG00000025276)	GABRA2 (ENSPNAG00000005023)	GUF1 (ENSPNAG00000025157)	ENSPNAG00000025038	ENSPNAG00000025008	ENSPNAG00000024932	ENSPNAG00000024913	dhrs13l1 (ENSPNAG00000003850)	CASP3 (ENSPNAG00000024845)	CASP3 (ENSPNAG00000004722)	irf2 (ENSPNAG00000024804) #22	enpp6 (ENSPNAG00000003847) #23	snx25 (ENSPNAG00000024742)	lrp2bp (ENSPNAG00000024622)	fnta (ENSPNAG00000024571)	PIGG (ENSPNAG00000024476)	hmmr (ENSPNAG00000003826)	ENSPNAG00000024309	TENM2 (ENSPNAG00000024277) ##34	ENSPNAG00000024096	ENSPNAG00000024091	ENSPNAG00000024078	zgc:153146 (ENSPNAG00000024059)	pdlim3b (ENSPNAG00000024038)	SORBS2 (ENSPNAG00000023967)	FAM149A (ENSPNAG00000023868)
Mexicana tetra	MODERN SPECIES	16	fgf24 (ENSAMXG00000005825)	pcgf1 (ENSAMXG00000005832)	lbx2 (ENSAMXG00000031000)	nanos1 (ENSAMXG00000043091)	ap1ar (ENSAMXG00000005849)	gabra4 (ENSAMXG00000005855)	GABRA2 (ENSAMXG00000039580)	ENSAMXG00000029805	GUF1 (ENSAMXG00000005871)	ENSAMXG00000040089	ENSAMXG00000005879	ENSAMXG00000043856	ENSAMXG00000025950	dhrs13l1 (ENSAMXG00000013473)	ENSAMXG00000034083	irf2 (ENSAMXG00000036672) #22	enpp6 (ENSAMXG00000042587) #23	snx25 (ENSAMXG00000005912)	lrp2bp (ENSAMXG00000005937)	fnta (ENSAMXG00000005949)	PIGG (ENSAMXG00000005956)	hmmr (ENSAMXG00000005962)	ENSAMXG00000030136	ENSAMXG00000040237	ENSAMXG00000005973 ##34	ntrk3a (ENSAMXG00000039006)	map1lc3b (ENSAMXG00000041715)	ZCCHC14 (ENSAMXG00000043824)	jph3b (ENSAMXG00000004490)	klhdc4 (ENSAMXG00000038248)	slc7a5 (ENSAMXG00000034682)
Cyprinoidei	ANCESTRAL SPECIES	45	ENSGT00940000164405	ENSGT00940000167002	ENSGT00940000159651	ENSGT00940000166497	ENSGT00950000183135.B.a.b	ENSGT00940000167144	ENSGT00940000159024	ENSGT00940000157266.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00950000183035.b.e.a	ENSGT00940000164838.f	ENSGT00390000015511	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b	ENSGT00940000159063.e #22	ENSGT00940000158457 #23	ENSGT00950000182856.a.a.b	ENSGT00390000013490	ENSGT00910000144269	ENSGT00550000074935	ENSGT00940000163435	ENSGT01060000248588.a.c.b	ENSGT00940000165492.a.b	ENSGT01030000234583.a.a.c.b.b.d	ENSGT00940000164356.b	ENSGT00950000183177.a.a.a.a.g	ENSGT00940000178677	ENSGT00940000166254.a	ENSGT01060000253478	ENSGT00940000164577.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	669							ENSGT00940000167144.e	ENSGT00940000159024.e	ENSGT00940000157266.b.h	ENSGT00390000014316.c.a.d	ENSGT00950000183035.b.e.a.a	ENSGT00940000164838.f.b	ENSGT00390000015511.l	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b.p	ENSGT00940000159063.e.a #22	ENSGT00940000158457.e #23	ENSGT00950000182856.a.a.b.d	ENSGT00910000144269.e
Goldfish	MODERN SPECIES	260							ap1ar (ENSCARG00000062896)	gabra4 (ENSCARG00000062862)	ENSCARG00000060834	ENSCARG00000060715	ENSCARG00000060688	ENSCARG00000060672	ENSCARG00000060661	dhrs13l1 (ENSCARG00000060634)	CASP3 (ENSCARG00000060603)	irf2 (ENSCARG00000060570) #22	enpp6 (ENSCARG00000060473) #23	snx25 (ENSCARG00000057686)	PIGG (ENSCARG00000062989)
Cyprininae_a	ANCESTRAL SPECIES	47			ENSGT00940000159651.a	ENSGT00940000166497.d	ENSGT00950000183135.B.a.b.h	ENSGT00940000167144.e	ENSGT00940000159024.e	ENSGT00940000157266.b.h	ENSGT00550000074940.c	ENSGT00390000014316.c.a.d	ENSGT00950000183035.b.e.a.a	ENSGT00940000164838.f.b	ENSGT00390000015511.l	ENSGT00940000155599.i.a.a.l	ENSGT00940000153232.a.b.b.p	ENSGT00940000159063.e.a #22	ENSGT00940000158457.e #23	ENSGT00950000182856.a.a.b.d	ENSGT00910000144269.e	ENSGT00550000074935.b	ENSGT00940000162460.s	ENSGT01060000248588.a.c.b.d	ENSGT00940000165492.a.b.a	ENSGT01030000234583.a.a.c.b.b.d.b	ENSGT00940000164356.b.b	ENSGT00940000166254.a.d	ENSGT00940000164577.b.b	ENSGT00950000183027.a.a.b.c.a	ENSGT00390000002792.d	ENSGT00940000154508.a.a.s.b.e.b	ENSGT00940000157656.a.k
Common carp reference	MODERN SPECIES	20	lbx2 (ENSCCRG00000060680)	pcgf1 (ENSCCRG00000031047)	ENSCCRG00000066409	nanos1 (ENSCCRG00000073006)	ap1ar (ENSCCRG00000043502)	ENSCCRG00000054188	gabra4 (ENSCCRG00000053947)	ENSCCRG00000012208	ENSCCRG00000033872	ENSCCRG00000037621	ENSCCRG00000035162	ENSCCRG00000081526	ENSCCRG00000035156	dhrs13l1 (ENSCCRG00000069961)	CASP3 (ENSCCRG00000050309)	irf2 (ENSCCRG00000065434) #22	enpp6 (ENSCCRG00000021989) #23	snx25 (ENSCCRG00000025110)	ENSCCRG00000069897	fnta (ENSCCRG00000056910)	ENSCCRG00000019634	trpc3 (ENSCCRG00000035588)	ENSCCRG00000072386	ENSCCRG00000002763	ENSCCRG00000039709	trim35-27 (ENSCCRG00000054467)	ENSCCRG00000002009	rgs14a (ENSCCRG00000007506)	ENSCCRG00000021829	arl3l2 (ENSCCRG00000068843)	ENSCCRG00000049871
Golden-line barbel	MODERN SPECIES	579															CASP3 (ENSSGRG00000039238)	irf2 (ENSSGRG00000039245) #22	enpp6 (ENSSGRG00000039268) #23	snx25 (ENSSGRG00000039270)	PIGG (ENSSGRG00000039932)	fnta (ENSSGRG00000039936)	gstp1.2 (ENSSGRG00000040105)	trpc3 (ENSSGRG00000040114)	ENSSGRG00000040175	trim35-27 (ENSSGRG00000040177)	adra2da (ENSSGRG00000040179)	ENSSGRG00000040182
Cyprininae	ANCESTRAL SPECIES	171	ENSGT00940000165256.h	ENSGT00940000164405.k.a	ENSGT00940000167002.f.a	ENSGT00940000159651.b	ENSGT00940000166497.c	ENSGT00950000183135.B.a.b.g	ENSGT00940000167144.f	ENSGT00940000159024.f	ENSGT00940000157266.b.g	ENSGT00550000074940	ENSGT00390000014316.c.a.c	ENSGT00950000183035.b.e.a.b	ENSGT00940000164838.f.a	ENSGT00390000015511.k	ENSGT00940000153232.a.b.b.o.a	ENSGT00940000159063.e.b #22	ENSGT00940000158457.f #23	ENSGT00950000182856.a.a.b.c	ENSGT00390000013490	ENSGT00910000144269.f	ENSGT00550000074935.a	ENSGT00940000163435.i.a	ENSGT01060000248588.a.c.b.c	ENSGT00940000165492.a.b.b	ENSGT00970000193390.c.a.a.a.b.b.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	5	kazald2 (ENSCARG00000002004)	tlx2 (ENSCARG00000002023)	npm1b (ENSCARG00000002049)	fgf24 (ENSCARG00000002073)	pcgf1 (ENSCARG00000002101)	lbx2 (ENSCARG00000002147)	nanos1 (ENSCARG00000002159)	ap1ar (ENSCARG00000002182)	gabra4 (ENSCARG00000002223)	ENSCARG00000002434	GUF1 (ENSCARG00000003366)	GNPDA2 (ENSCARG00000003450)	ENSCARG00000003460	ENSCARG00000003467	CASP3 (ENSCARG00000003470)	irf2 (ENSCARG00000003477) #22	enpp6 (ENSCARG00000003487) #23	acsl1b (ENSCARG00000003591)	ENSCARG00000004968	rgs14a (ENSCARG00000004979)	SLC34A1 (ENSCARG00000005021)	fnta (ENSCARG00000005049)	gstp1.2 (ENSCARG00000005214)	trpc3 (ENSCARG00000005279)	ENSCARG00000006826	ENSCARG00000006858	adra2da (ENSCARG00000006876)	irf2 (ENSCARG00000006887) #22	CASP3 (ENSCARG00000006899)	ENSCARG00000006908	SEC24B (ENSCARG00000007128)
Goldfish	MODERN SPECIES	5	ENSCARG00000014507	pmt (ENSCARG00000014481)	zgc:152774 (ENSCARG00000014475)	ENSCARG00000014472	TBC1D9B (ENSCARG00000012155)	ENSCARG00000012033	il21 (ENSCARG00000012021)	ENSCARG00000012012	adad1 (ENSCARG00000012005)	SRP72 (ENSCARG00000011801)	arl9 (ENSCARG00000011768)	hopx (ENSCARG00000011762)	SEC24B (ENSCARG00000007128)	ENSCARG00000006908	CASP3 (ENSCARG00000006899)	irf2 (ENSCARG00000006887) #22	adra2da (ENSCARG00000006876)	ENSCARG00000006858	ENSCARG00000006826	trpc3 (ENSCARG00000005279)	gstp1.2 (ENSCARG00000005214)	fnta (ENSCARG00000005049)	SLC34A1 (ENSCARG00000005021)	rgs14a (ENSCARG00000004979)	ENSCARG00000004968	acsl1b (ENSCARG00000003591)	enpp6 (ENSCARG00000003487) #23	irf2 (ENSCARG00000003477) #22	CASP3 (ENSCARG00000003470)	ENSCARG00000003467	ENSCARG00000003460
Cyprininae_a	ANCESTRAL SPECIES	368	ENSGT00940000167002.f.a	ENSGT00940000159651.b	ENSGT00940000166497.c	ENSGT00950000183135.B.a.b.g	ENSGT00940000167144.f	ENSGT00940000159024.f	ENSGT00940000157266.b.g	ENSGT00550000074940.d	ENSGT00390000014316.c.a.c	ENSGT00950000183035.b.e.b	ENSGT00950000183035.b.e.a.b	ENSGT00940000164838.f.a	ENSGT00390000015511.k	ENSGT00940000153232.a.b.b.o.a	ENSGT00940000153232.a.b.b.o.b	ENSGT00940000159063.e.b #22	ENSGT00940000158457.f #23	ENSGT00950000182856.a.a.b.c	ENSGT00390000013490	ENSGT00910000144269.f	ENSGT00550000074935.a	ENSGT00940000163435.i.a
Common carp reference	MODERN SPECIES	35	lbx2 (ENSCCRG00000077268)	nanos1 (ENSCCRG00000053817)	ap1ar (ENSCCRG00000077556)	gabra4 (ENSCCRG00000013590)	ENSCCRG00000058776	ENSCCRG00000068485	ENSCCRG00000079822	ENSCCRG00000059862	ENSCCRG00000041188	ENSCCRG00000062400	ENSCCRG00000067127	ENSCCRG00000029150	CASP3 (ENSCCRG00000021012)	CASP3 (ENSCCRG00000042146)	CASP3 (ENSCCRG00000014661)	irf2 (ENSCCRG00000014663) #22	enpp6 (ENSCCRG00000014737) #23	snx25 (ENSCCRG00000043133)	lrp2bp (ENSCCRG00000016105)	ENSCCRG00000039882	ENSCCRG00000073221	ENSCCRG00000061751	fnta (ENSCCRG00000018900)	gstp1.2 (ENSCCRG00000057751)	trpc3 (ENSCCRG00000023545)	ENSCCRG00000046359	ENSCCRG00000049916	adra2da (ENSCCRG00000055505)	ENSCCRG00000060420	ENSCCRG00000049910	rgs14a (ENSCCRG00000049907)
Golden-line barbel	MODERN SPECIES	111	tlx2 (ENSSGRG00000036971)	npm1b (ENSSGRG00000036973)	fgf24 (ENSSGRG00000036974)	pcgf1 (ENSSGRG00000036976)	lbx2 (ENSSGRG00000036977)	nanos1 (ENSSGRG00000036979)	ap1ar (ENSSGRG00000036980)	gabra4 (ENSSGRG00000036983)	ENSSGRG00000036985	GUF1 (ENSSGRG00000036986)	ENSSGRG00000036987	ENSSGRG00000036996	dhrs13l1 (ENSSGRG00000036998)	CASP3 (ENSSGRG00000036999)	CASP3 (ENSSGRG00000037004)	irf2 (ENSSGRG00000037126) #22	enpp6 (ENSSGRG00000037175) #23	snx25 (ENSSGRG00000037178)	lrp2bp (ENSSGRG00000037511)	PIGG (ENSSGRG00000037512)	fnta (ENSSGRG00000037515)
Zebrafish	MODERN SPECIES	5	fgf24 (ENSDARG00000037677)	pcgf1 (ENSDARG00000001249)	lbx2 (ENSDARG00000025131)	nanos1 (ENSDARG00000109337)	ap1ar (ENSDARG00000031496)	gabra4 (ENSDARG00000013389)	ENSDARG00000113737	GUF1 (ENSDARG00000029088)	ENSDARG00000024443	ENSDARG00000089009	ENSDARG00000040463	ENSDARG00000088924	dhrs13l1 (ENSDARG00000098746)	CASP3 (ENSDARG00000055045)	ENSDARG00000110894	irf2 (ENSDARG00000040465) #22	enpp6 (ENSDARG00000040469) #23	snx25 (ENSDARG00000099545)	lrp2bp (ENSDARG00000040478)	PIGG (ENSDARG00000038270)	fnta (ENSDARG00000099143)	gstp1.2 (ENSDARG00000104068)	gstp1.1 (ENSDARG00000103019)	trpc3 (ENSDARG00000098291)	ENSDARG00000109310	cdx1a (ENSDARG00000114554)	pdgfrb (ENSDARG00000100897)	csf1ra (ENSDARG00000102986)	ENSDARG00000100890	HMGXB3 (ENSDARG00000077823)	slc35a4 (ENSDARG00000062379)
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000159063.f #22
Clupeiformes	ANCESTRAL SPECIES	26	ENSGT00940000166376	ENSGT00940000159025	ENSGT00950000183012.B.b	ENSGT00940000155777.b	ENSGT00940000177791	ENSGT00950000183026.A.a.a.b	ENSGT00390000006641	ENSGT00530000063548.B.e	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00540000073610.A	ENSGT00940000156393.a.b	ENSGT01000000214857	ENSGT00390000017281	ENSGT00950000182942.a.a	ENSGT00940000159063.f #22	ENSGT00940000173396	ENSGT01030000234601.q.a	ENSGT00940000153745.b.e.a	ENSGT00390000001189.b.j	ENSGT00390000002596.b	ENSGT00730000111690.B.f.b.b	ENSGT00940000156164	ENSGT00520000055649.a	ENSGT00730000111690.B.g	ENSGT00940000180362.b	ENSGT00940000155062.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.a.a	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942
Atlantic herring	MODERN SPECIES	14	vps37a (ENSCHAG00000010503)	mtmr7b (ENSCHAG00000010713)	ENSCHAG00000010905	ENSCHAG00000010909	ENSCHAG00000010955	pcm1 (ENSCHAG00000010999)	ENSCHAG00000011170	asah1b (ENSCHAG00000011282)	aip (ENSCHAG00000013063)	cdk2ap2 (ENSCHAG00000013071)	ENSCHAG00000013085	ENSCHAG00000013103	ENSCHAG00000013144	ccdc86 (ENSCHAG00000013148)	glb1 (ENSCHAG00000013252)	ENSCHAG00000015436 #22	ENSCHAG00000015448	ENSCHAG00000015469	tacr3l (ENSCHAG00000015499)	acy3.2 (ENSCHAG00000015523)	cldnd1b (ENSCHAG00000015544)	ENSCHAG00000015553	ENSCHAG00000015589	ENSCHAG00000015606	ENSCHAG00000015639	ENSCHAG00000015655	osbp (ENSCHAG00000015665)	patl1 (ENSCHAG00000015834)	ENSCHAG00000015920	ENSCHAG00000015992	ENSCHAG00000015999
Denticle herring	MODERN SPECIES	14	pkd2 (ENSDCDG00000030259)	vps37a (ENSDCDG00000030232)	mtmr7b (ENSDCDG00000030043)	ENSDCDG00000030029	pcm1 (ENSDCDG00000028924)	asah1b (ENSDCDG00000028732)	aip (ENSDCDG00000028722)	cdk2ap2 (ENSDCDG00000028719)	ENSDCDG00000028714	cntf (ENSDCDG00000028705)	ENSDCDG00000028701	ENSDCDG00000028689	ENSDCDG00000028687	ENSDCDG00000028684	glb1 (ENSDCDG00000027570)	ENSDCDG00000027557 #22	ENSDCDG00000027556	tacr3l (ENSDCDG00000027552)	acy3.2 (ENSDCDG00000027548)	cldnd1b (ENSDCDG00000027546)	osbp (ENSDCDG00000027532)	patl1 (ENSDCDG00000027526)	RPS6KB2 (ENSDCDG00000027065)	ENSDCDG00000027041	ENSDCDG00000027036	ENSDCDG00000027019	ENSDCDG00000027011	vps37c (ENSDCDG00000027008)	tmem176 (ENSDCDG00000027004)	ENSDCDG00000027002	ENSDCDG00000026990
Otophysi	ANCESTRAL SPECIES	79	ENSGT00940000160772	ENSGT00940000158356	ENSGT00390000009873	ENSGT00940000154593.a.b	ENSGT00940000158368	ENSGT00390000006915.d.j.a	ENSGT01080000257376.a.b.a.a	ENSGT00390000006915.d.i	ENSGT00940000158602	ENSGT00940000165059.A	ENSGT00390000009223	ENSGT00940000156167.b	ENSGT01030000234566.e.b.a.a.b #34	ENSGT01030000234566.e.b.a.a.a.a #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f #22	ENSGT00390000011766	ENSGT00520000055589.d.a.b #24	ENSGT00940000158194 #28	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00980000198603.B	ENSGT00540000073610.A	ENSGT00520000058756	ENSGT00940000156393.a.b
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00940000158105	ENSGT00940000154466.cc	ENSGT00390000009191	ENSGT00940000160772	ENSGT00940000158356	ENSGT00390000009873	ENSGT00940000154593.a.b	ENSGT00940000158368	ENSGT00390000006915.d.j.a	ENSGT00940000158602	ENSGT00940000165059.A	ENSGT00390000009223	ENSGT00940000156167.b	ENSGT01030000234566.e.b.a.a.a.a #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f #22	ENSGT00390000011766	ENSGT00520000055589.d.a.b #24	ENSGT00940000158194 #28	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000157294.c	ENSGT00390000015958.c	ENSGT00980000198603.B	ENSGT00540000073610.A	ENSGT00520000058756	ENSGT00940000156393.a.b	ENSGT00940000155140.t	ENSGT00390000008798.c	ENSGT00940000157887	ENSGT00950000182917.a.a.a.b
Characiphysae_b	ANCESTRAL SPECIES	76	ENSGT00940000158105	ENSGT00940000154466.cc	ENSGT00390000009191	ENSGT00940000160772	ENSGT00940000158356	ENSGT00390000009873	ENSGT00940000154593.a.b	ENSGT00940000158368	ENSGT00390000006915.d.j.a	ENSGT00940000158602	ENSGT00940000165059.A	ENSGT00390000009223	ENSGT00940000156167.b	ENSGT01030000234566.e.b.a.a.a.a #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f #22	ENSGT00390000011766	ENSGT00520000055589.d.a.b #24
Characoidei	ANCESTRAL SPECIES	334										ENSGT00940000158602	ENSGT00940000165059.A	ENSGT00390000009223	ENSGT00940000156167.b	ENSGT01030000234566.e.b.a.a.a.a #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f #22	ENSGT00390000011766	ENSGT00520000055589.d.a.b #24
Red-bellied piranha	MODERN SPECIES	148								wdr17 (ENSPNAG00000013253)	asb5b (ENSPNAG00000013273)	spcs3 (ENSPNAG00000013292)	vegfc (ENSPNAG00000013302)	TENM3 (ENSPNAG00000013487) #34	ENSPNAG00000002786	ENSPNAG00000002794	dctd (ENSPNAG00000013575) #32	irf2a (ENSPNAG00000013591) #22	tmem134 (ENSPNAG00000013649)	STOX2 (ENSPNAG00000013674) #24	dnajb14 (ENSPNAG00000002897)	ENSPNAG00000002898	pla2g12a (ENSPNAG00000002908)	CASP6 (ENSPNAG00000002925)	ENSPNAG00000002937	ENSPNAG00000013782	cntf (ENSPNAG00000013789)	ENSPNAG00000005080	ccdc149b (ENSPNAG00000013818)
Mexicana tetra	MODERN SPECIES	112													tenm3 (ENSAMXG00000042335) #34	ENSAMXG00000021222 #34	dctd (ENSAMXG00000035628) #32	irf2a (ENSAMXG00000043646) #22	tmem134 (ENSAMXG00000036971)	STOX2 (ENSAMXG00000000664) #24
Electric eel	MODERN SPECIES	229													bnc2 (ENSEEEG00000021609)	PSIP1 (ENSEEEG00000021611)	snapc3 (ENSEEEG00000021613)	irf2a (ENSEEEG00000021615) #22	tmem134 (ENSEEEG00000021617)	STOX2 (ENSEEEG00000021619) #24	ENSEEEG00000021624	taf7 (ENSEEEG00000021664)	elf1 (ENSEEEG00000021724)	tnmd (ENSEEEG00000021726)	pcdh19 (ENSEEEG00000021731)
Channel catfish	MODERN SPECIES	22	ENSIPUG00000002724	ENSIPUG00000002719	ENSIPUG00000002708	ENSIPUG00000002705	ENSIPUG00000002694	ENSIPUG00000002687	wdr17 (ENSIPUG00000002658)	asb5 (ENSIPUG00000002631)	tapbp (ENSIPUG00000002618)	SPCS3 (ENSIPUG00000002609)	VEGFC (ENSIPUG00000002582)	ENSIPUG00000002575	TENM3 (ENSIPUG00000002505) #34	ENSIPUG00000002498 #32	Dctd (ENSIPUG00000002486) #32	irf2a (ENSIPUG00000002472) #22	tmem134 (ENSIPUG00000002462)	stox2 (ENSIPUG00000002443) #24	ing2 (ENSIPUG00000002434) #28	SOD3 (ENSIPUG00000002419)	aip (ENSIPUG00000002402)	cdk2ap2 (ENSIPUG00000002396)	lgi2b (ENSIPUG00000002354)	ccdc149b (ENSIPUG00000002331)	ENSIPUG00000002324	pdcd4a (ENSIPUG00000002299)	ENSIPUG00000002292	ENSIPUG00000002287	ENSIPUG00000002279	ENSIPUG00000002271 #34	cntf (ENSIPUG00000002265)
Cyprinoidei	ANCESTRAL SPECIES	22	ENSGT00940000154466.cc	ENSGT00940000160772	ENSGT00940000158356	ENSGT00390000009873	ENSGT00940000154593.a.b	ENSGT00940000158368	ENSGT01080000257376.a.b.a.a	ENSGT00390000006915.d.i	ENSGT00940000158602	ENSGT00940000165059.A	ENSGT00390000009223	ENSGT00940000156167.b	ENSGT01030000234566.e.b.a.a.b #34	ENSGT01030000234566.e.b.a.a.a.a #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f #22	ENSGT00390000011766	ENSGT00520000055589.d.a.b #24	ENSGT00940000158194 #28	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00980000198603.B	ENSGT00540000073610.A	ENSGT00520000058756	ENSGT00940000156393.a.b.c	ENSGT01100000263483.E.b.a.c.b.a.a	ENSGT01100000263483.E.b.a.c.b.a.b	ENSGT01100000263483.E.b.a.c.a.a	ENSGT01100000263483.F.a.eb	ENSGT00940000157807.g.b	ENSGT00940000162502.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	662															ENSGT01030000234566.e.b.a.a.a.a.n #34	ENSGT00940000159063.f.a.a #22	ENSGT00390000011766.h	ENSGT00520000055589.d.a.b.b #24	ENSGT00940000158194.i.b #28	ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.a.b.b.a	ENSGT00390000001289.a.f	ENSGT00940000160334.p	ENSGT00940000157294.c.b	ENSGT00390000015958.c.a	ENSGT00540000073610.A.a	ENSGT00940000156393.a.b.c.b	ENSGT01100000263483.E.b.a.c.b.a.a.b	ENSGT01100000263483.E.b.a.c.a.a.a
Goldfish	MODERN SPECIES		si:ch73-41e3.7 (ENSCARG00000025041)	ENSCARG00000025039	ENSCARG00000025035	mrpl39 (ENSCARG00000024975)	atp5pf (ENSCARG00000024935)	jam2a (ENSCARG00000024905)	APP (ENSCARG00000018902)	cyyr1 (ENSCARG00000018279)	ENSCARG00000018275	ADAMTS1 (ENSCARG00000018207)	n6amt1 (ENSCARG00000018190)	gart (ENSCARG00000018148)	ENSCARG00000018117	ENSCARG00000017526 #34	dctd (ENSCARG00000017400) #32	irf2a (ENSCARG00000017380) #22	tmem134 (ENSCARG00000017366)	ENSCARG00000017352 #24	ing2 (ENSCARG00000017344) #28	ENSCARG00000017339	aip (ENSCARG00000017321)	cdk2ap2 (ENSCARG00000017310)	cntf (ENSCARG00000017305)	ENSCARG00000017294	ENSCARG00000017279	ENSCARG00000017270	ENSCARG00000017266	TESK1 (ENSCARG00000017202)	faah2a (ENSCARG00000017083)	zgc:56493 (ENSCARG00000017066)	ENSCARG00000017032
Cyprininae_a	ANCESTRAL SPECIES	76															ENSGT01030000234566.e.b.a.a.a.a.n #34	ENSGT00940000159063.f.a.a #22	ENSGT00390000011766.h	ENSGT00520000055589.d.a.b.b #24	ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.a.b.b.a	ENSGT00390000001289.a.f	ENSGT00940000160334.p	ENSGT00940000157294.c.b	ENSGT00390000015958.c.a	ENSGT00540000073610.A.a	ENSGT00940000156393.a.b.c.b	ENSGT01100000263483.E.b.a.c.b.a.a.b	ENSGT01100000263483.E.b.a.c.b.a.b	ENSGT00940000157807.g.b.l	ENSGT00940000162502.a.a	ENSGT00940000154259.b.b.a	ENSGT00390000011517.a.a.c.a.b.a.d
Common carp reference	MODERN SPECIES	22	galntl6 (ENSCCRG00000041366)	galnt7 (ENSCCRG00000040431)	hmgb2a (ENSCCRG00000060705)	hand2 (ENSCCRG00000002702)	cep44 (ENSCCRG00000001108)	fbxo8 (ENSCCRG00000069917)	glra3 (ENSCCRG00000050387)	ENSCCRG00000079948	gpm6ab (ENSCCRG00000074115)	wdr17 (ENSCCRG00000031233)	asb5b (ENSCCRG00000061922)	spcs3 (ENSCCRG00000031218)	vegfc (ENSCCRG00000000931)	ENSCCRG00000045275 #34	dctd (ENSCCRG00000045283) #32	ENSCCRG00000064446 #22	tmem134 (ENSCCRG00000045301)	ENSCCRG00000051978	aip (ENSCCRG00000048177)	cdk2ap2 (ENSCCRG00000051969)	lgi2b (ENSCCRG00000051972)	ccdc149b (ENSCCRG00000051983)	cntf (ENSCCRG00000059766)	ENSCCRG00000056872	ENSCCRG00000077796	ENSCCRG00000073840	ENSCCRG00000056721	ENSCCRG00000023521	ENSCCRG00000023502	faah2a (ENSCCRG00000058192)	zgc:56493 (ENSCCRG00000071331)
Golden-line barbel	MODERN SPECIES	691													TENM3 (ENSSGRG00000051410) #34	dctd (ENSSGRG00000051356) #32	irf2a (ENSSGRG00000051355) #22	irf2a (ENSSGRG00000051354) #22	tmem134 (ENSSGRG00000051353)	STOX2 (ENSSGRG00000051351) #24	aip (ENSSGRG00000051350)	cdk2ap2 (ENSSGRG00000051349)	ENSSGRG00000051348	lgi2b (ENSSGRG00000051347)	ccdc149b (ENSSGRG00000051346)	cntf (ENSSGRG00000051344)	ENSSGRG00000051343	ENSSGRG00000051342	ENSSGRG00000051341	ENSSGRG00000051340	ENSSGRG00000051339	ENSSGRG00000051337	faah2a (ENSSGRG00000051336)
Cyprininae	ANCESTRAL SPECIES	164	ENSGT00940000154466.cc.a	ENSGT00940000160772.h	ENSGT00940000158356.l	ENSGT00390000009873.l	ENSGT00940000154593.a.b.j	ENSGT00940000158368.c	ENSGT01080000257376.a.b.a.a	ENSGT00390000006915.d.i.a	ENSGT00940000158602.i	ENSGT00940000165059.A.a	ENSGT00390000009223.rb	ENSGT00940000156167.b.a	ENSGT01030000234566.e.b.a.a.b #34	ENSGT01030000234566.e.b.a.a.a.a.m #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f.a.b #22	ENSGT00390000011766.g	ENSGT00520000055589.d.a.b.a #24	ENSGT00940000158194.i.a #28	ENSGT00940000162224.h	ENSGT00390000001289.a.e	ENSGT00940000160334.o	ENSGT00940000157294.c.a	ENSGT00390000015958.c.b	ENSGT00980000198603.B	ENSGT00540000073610.A.b	ENSGT00940000156393.a.b.d	ENSGT00520000058756	ENSGT00940000156393.a.b.c.a	ENSGT01100000263483.E.b.a.c.b.a.a.a.a.a
Cyprininae_a	ANCESTRAL SPECIES	157	ENSGT00940000154466.cc.a	ENSGT00940000160772.h	ENSGT00940000158356.l	ENSGT00390000009873.l	ENSGT00940000154593.a.b.j	ENSGT00940000158368.c	ENSGT01080000257376.a.b.a.a	ENSGT00390000006915.d.i.a	ENSGT00940000158602.i	ENSGT00940000165059.A.a	ENSGT00390000009223.rb	ENSGT00940000156167.b.a	ENSGT01030000234566.e.b.a.a.b #34	ENSGT01030000234566.e.b.a.a.a.a.m #34	ENSGT00940000153676.a #32	ENSGT00940000159063.f.a.b #22	ENSGT00390000011766.g	ENSGT00520000055589.d.a.b.a #24	ENSGT00940000158194.i.a #28	ENSGT00940000162224.h	ENSGT00390000001289.a.e	ENSGT00940000160334.o	ENSGT00940000157294.c.a	ENSGT00390000015958.c.b	ENSGT00980000198603.B	ENSGT00540000073610.A.b	ENSGT00940000156393.a.b.d	ENSGT00520000058756	ENSGT00940000156393.a.b.c.a	ENSGT01100000263483.E.b.a.c.b.a.a.a.a.a
Golden-line barbel	MODERN SPECIES	16	galntl6 (ENSSGRG00000032937)	galnt7 (ENSSGRG00000032938)	hmgb2a (ENSSGRG00000032939)	hand2 (ENSSGRG00000032940)	cep44 (ENSSGRG00000032942)	hpgd (ENSSGRG00000032943)	glra3 (ENSSGRG00000032951)	gpm6ab (ENSSGRG00000032955)	wdr17 (ENSSGRG00000032964)	asb5b (ENSSGRG00000033524)	spcs3 (ENSSGRG00000033525)	vegfc (ENSSGRG00000033530)	ENSSGRG00000033531	TENM3 (ENSSGRG00000033560) #34	dctd (ENSSGRG00000036221) #32	irf2a (ENSSGRG00000036222) #22	tmem134 (ENSSGRG00000036223)	STOX2 (ENSSGRG00000036224) #24	ing2 (ENSSGRG00000036225) #28	SOD3 (ENSSGRG00000036227)	aip (ENSSGRG00000036230)	cdk2ap2 (ENSSGRG00000036234)	lgi2b (ENSSGRG00000036237)	ccdc149b (ENSSGRG00000036241)	cntf (ENSSGRG00000036247)	ENSSGRG00000036249	ENSSGRG00000036251	ENSSGRG00000036252	ENSSGRG00000036253	ENSSGRG00000036254	ENSSGRG00000036255
Common carp reference	MODERN SPECIES	27	hmgb2a (ENSCCRG00000079039)	hand2 (ENSCCRG00000040398)	cep44 (ENSCCRG00000002666)	fbxo8 (ENSCCRG00000065697)	hpgd (ENSCCRG00000061983)	glra3 (ENSCCRG00000049689)	ENSCCRG00000058509	gpm6ab (ENSCCRG00000024308)	wdr17 (ENSCCRG00000031139)	asb5b (ENSCCRG00000058956)	spcs3 (ENSCCRG00000032030)	vegfc (ENSCCRG00000075544)	tenm3 (ENSCCRG00000059959) #34	ENSCCRG00000041144 #34	ENSCCRG00000045193 #32	irf2a (ENSCCRG00000076801) #22	tmem134 (ENSCCRG00000081609)	ENSCCRG00000051974 #24	ENSCCRG00000081924	ing2 (ENSCCRG00000005204) #28	cdk2ap2 (ENSCCRG00000064036)	aip (ENSCCRG00000051967)	lgi2b (ENSCCRG00000054335)	ccdc149b (ENSCCRG00000051986)	ENSCCRG00000067650	cntf (ENSCCRG00000025703)	ENSCCRG00000077428	ENSCCRG00000057879	ENSCCRG00000054934	ENSCCRG00000025732	ENSCCRG00000023488
Goldfish	MODERN SPECIES	277	fbxo8 (ENSCARG00000019500)	cep44 (ENSCARG00000019483)	hpgd (ENSCARG00000019468)	ENSCARG00000019464	glra3 (ENSCARG00000019237)	gpm6ab (ENSCARG00000018978)	wdr17 (ENSCARG00000018888)	asb5b (ENSCARG00000018865)	ENSCARG00000048603	spcs3 (ENSCARG00000048575)	ENSCARG00000048565	vegfc (ENSCARG00000048535)	ENSCARG00000046010 #34	dctd (ENSCARG00000045635) #32	tmem134 (ENSCARG00000045521)	irf2a (ENSCARG00000045479) #22	ENSCARG00000045456 #24	ing2 (ENSCARG00000045436) #28	SOD3 (ENSCARG00000045423)	aip (ENSCARG00000045389)	cdk2ap2 (ENSCARG00000045363)	lgi2b (ENSCARG00000045315)	ccdc149b (ENSCARG00000045020)	cntf (ENSCARG00000044968)	ENSCARG00000044914	ENSCARG00000044891	ENSCARG00000044869	ENSCARG00000044862	ENSCARG00000044849	TESK1 (ENSCARG00000044823)	ENSCARG00000044810
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000159063.f.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000159063.f.b #22
Golden-line barbel	MODERN SPECIES	691														TENM3 (ENSSGRG00000051410) #34	dctd (ENSSGRG00000051356) #32	irf2a (ENSSGRG00000051355) #22	irf2a (ENSSGRG00000051354) #22	tmem134 (ENSSGRG00000051353)	STOX2 (ENSSGRG00000051351) #24	aip (ENSSGRG00000051350)	cdk2ap2 (ENSSGRG00000051349)	ENSSGRG00000051348	lgi2b (ENSSGRG00000051347)	ccdc149b (ENSSGRG00000051346)	cntf (ENSSGRG00000051344)	ENSSGRG00000051343	ENSSGRG00000051342	ENSSGRG00000051341	ENSSGRG00000051340	ENSSGRG00000051339	ENSSGRG00000051337
Zebrafish	MODERN SPECIES		ENSDARG00000113575	hmgb2a (ENSDARG00000029722)	hand2 (ENSDARG00000008305)	fbxo8 (ENSDARG00000007477)	cep44 (ENSDARG00000053106)	hpgd (ENSDARG00000012016)	glra3 (ENSDARG00000011066)	gpm6ab (ENSDARG00000004621)	wdr17 (ENSDARG00000075098)	asb5b (ENSDARG00000053222)	spcs3 (ENSDARG00000089976)	vegfc (ENSDARG00000069640)	ENSDARG00000104657	tenm3 (ENSDARG00000005479) #34	dctd (ENSDARG00000036990) #32	irf2a (ENSDARG00000007387) #22	tmem134 (ENSDARG00000024828)	STOX2 (ENSDARG00000070162) #24	ing2 (ENSDARG00000104907) #28	SOD3 (ENSDARG00000079183)	aip (ENSDARG00000104437)	cdk2ap2 (ENSDARG00000103145)	lgi2b (ENSDARG00000069701)	ccdc149b (ENSDARG00000020857)	ENSDARG00000093120	cntf (ENSDARG00000074662)	ENSDARG00000076585	ENSDARG00000079631	zgc:152658 (ENSDARG00000018587)	zgc:194443 (ENSDARG00000078182)	ENSDARG00000095065
Osteoglossiformes	DUPLICATION
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	114	ENSGT00940000160321.c.a	ENSGT00940000157278.s	ENSGT00940000166529	ENSGT00940000157056.a	ENSGT00940000156741	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00950000182856.a.a.b.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388	ENSGT00940000154508.a.a	ENSGT00390000003901	ENSGT00940000153232.a.b.a	ENSGT00940000153232.b	ENSGT00940000159063.g.a #22	ENSGT00520000055589.d.a.b #24	ENSGT00940000163251.b	ENSGT00390000006550 #25
Asian bonytongue	MODERN SPECIES	7	cyp4v2a (ENSSFOG00015020913)	tlr3 (ENSSFOG00015020904)	SORBS2 (ENSSFOG00015025985)	pdlim3a (ENSSFOG00015020818)	ufsp2 (ENSSFOG00015020811)	ankrd37 (ENSSFOG00015026212)	SNX25 (ENSSFOG00015020775)	cfap97 (ENSSFOG00015030570)	slc25a4 (ENSSFOG00015005428)	helt (ENSSFOG00015024516)	acsl1b (ENSSFOG00015020657)	primpol (ENSSFOG00015020632)	ENSSFOG00015028201	casp3a (ENSSFOG00015020608)	ENSSFOG00015020576	IRF2 (ENSSFOG00015032334) #22	STOX2 (ENSSFOG00015020536) #24	ENSSFOG00015020518	trappc11 (ENSSFOG00015020365) #25	WWC2 (ENSSFOG00015020303) #31	TENM3 (ENSSFOG00015020254) #34	vegfc (ENSSFOG00015020236)	spcs3 (ENSSFOG00015020226)	asb5b (ENSSFOG00015027571)	wdr17 (ENSSFOG00015020006)	GPM6A (ENSSFOG00015019961)	glra3 (ENSSFOG00015019945)	hpgd (ENSSFOG00015019878)	cep44 (ENSSFOG00015019847)	fbxo8 (ENSSFOG00015025727)	hand2 (ENSSFOG00015019807)
P. kingsleyae	MODERN SPECIES	259	fat1a (ENSPKIG00000024157)	mtnr1aa (ENSPKIG00000024139)	cyp4v2a (ENSPKIG00000024082)	tlr3 (ENSPKIG00000024029)	ENSPKIG00000023802	pdlim3a (ENSPKIG00000023684)	ankrd37 (ENSPKIG00000023670)	ufsp2 (ENSPKIG00000023651)	SNX25 (ENSPKIG00000023610)	cfap97 (ENSPKIG00000023583)	slc25a4 (ENSPKIG00000023568)	helt (ENSPKIG00000023547)	acsl1b (ENSPKIG00000023514)	primpol (ENSPKIG00000023486)	casp3a (ENSPKIG00000023466)	IRF2 (ENSPKIG00000023423) #22	STOX2 (ENSPKIG00000023367) #24	ENSPKIG00000023325	ENSPKIG00000023279	trappc11 (ENSPKIG00000023190) #25	ing2 (ENSPKIG00000023141) #28
Osteoglossiformes	ANCESTRAL SPECIES	231								ENSGT01090000260120.c	ENSGT00390000009529	ENSGT00940000155795.d	ENSGT00390000003680.a.a.a.d	ENSGT00940000164842	ENSGT00390000010980	ENSGT00950000182856.a.a.b.a	ENSGT00390000015511	ENSGT00940000159063.g.b #22	ENSGT00940000158457 #23	ENSGT00520000055589.d.a.a #24	ENSGT00390000015545 #26	ENSGT00940000158194 #28	ENSGT00940000153676.a #32	ENSGT01030000234566.e.b.a.a.d.a #34	ENSGT00950000183045.C	ENSGT00940000153230.A	ENSGT00940000165522.a	ENSGT00910000144159.B	ENSGT00390000006915.d.j.b	ENSGT00940000158368.j	ENSGT00940000160772.j	ENSGT00940000158105.j	ENSGT00940000155038.uc
P. kingsleyae	MODERN SPECIES	142				ENSPKIG00000007778	ENSPKIG00000007757	ENSPKIG00000007733	ENSPKIG00000007710	ENSPKIG00000007693	ENSPKIG00000007671	ndufs2 (ENSPKIG00000007619)	KIRREL1 (ENSPKIG00000007577)	PIP4P1 (ENSPKIG00000007543)	zgc:77880 (ENSPKIG00000007490)	snx25 (ENSPKIG00000007409)	ENSPKIG00000007373	irf2 (ENSPKIG00000007333) #22	enpp6 (ENSPKIG00000007305) #23	enpp6 (ENSPKIG00000007282) #23	STOX2 (ENSPKIG00000007258) #24	rwdd (ENSPKIG00000007232) #26	ING2 (ENSPKIG00000007217) #28	dctd (ENSPKIG00000007202) #32	ENSPKIG00000007190	TENM3 (ENSPKIG00000006791) #34	aga (ENSPKIG00000006658)	neil3 (ENSPKIG00000006630)	ENSPKIG00000006621	asb5a (ENSPKIG00000006588)	spata4 (ENSPKIG00000006546)	gpm6aa (ENSPKIG00000006511)	HAND2 (ENSPKIG00000006490)
Asian bonytongue	MODERN SPECIES	18	POU6F2 (ENSSFOG00015015897)	otulina (ENSSFOG00015025439)	OTULIN (ENSSFOG00015015927)	KCNJ10 (ENSSFOG00015015941)	ENSSFOG00015026520	ENSSFOG00015015958	ENSSFOG00015015991	ENSSFOG00015016020	ndufs2 (ENSSFOG00015016033)	KIRREL1 (ENSSFOG00015016073)	PIP4P1 (ENSSFOG00015026379)	zgc:77880 (ENSSFOG00015016117)	zgc:153146 (ENSSFOG00015016159)	snx25 (ENSSFOG00015016180)	ENSSFOG00015016228	irf2 (ENSSFOG00015016268) #22	enpp6 (ENSSFOG00015016299) #23	rwdd (ENSSFOG00015016340) #26	STOX2 (ENSSFOG00015016321) #24	dctd (ENSSFOG00015016372) #32	TENM3 (ENSSFOG00015016398) #34	aga (ENSSFOG00015026832)	neil3 (ENSSFOG00015016495)	asb5a (ENSSFOG00015016519)	spata4 (ENSSFOG00015025074)	gpm6aa (ENSSFOG00015016573)	ENSSFOG00015016602	HAND2 (ENSSFOG00015025637)	GALNT7 (ENSSFOG00015016651)	GALNTL6 (ENSSFOG00015016704)	FAM193A (ENSSFOG00015016741)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000159063.h #22
Asian bonytongue	MODERN SPECIES	19	phf10 (ENSSFOG00015015180)	zgc:77929 (ENSSFOG00015015168)	ppm1g (ENSSFOG00015015132)	DNA2 (ENSSFOG00015015086)	pbld (ENSSFOG00015027618)	HNRNPH3 (ENSSFOG00015015000)	rufy2 (ENSSFOG00015014951)	tspan15 (ENSSFOG00015014923)	tacr2 (ENSSFOG00015014918)	hk1 (ENSSFOG00015014842)	supv3l1 (ENSSFOG00015014751)	vps26a (ENSSFOG00015014736)	ENSSFOG00015025158	kifbp (ENSSFOG00015014707)	ENSSFOG00015031974	ENSSFOG00015014675 #22	ddx21 (ENSSFOG00015014610)	ENSSFOG00015014584	ENSSFOG00015014559	ENSSFOG00015027797	ENSSFOG00015026610	ENSSFOG00015014485	ENSSFOG00015014420	mpc1 (ENSSFOG00015014411)	ENSSFOG00015014359	rnaset2 (ENSSFOG00015014347)	MYOM2 (ENSSFOG00015014019)	CSMD1 (ENSSFOG00015013854)	mcph1 (ENSSFOG00015013771)	angpt2a (ENSSFOG00015013803)	agpat5 (ENSSFOG00015030368)
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1611	ENSCMIG00000003422	tm9sf3 (ENSCMIG00000003082)	ENSCMIG00000003045	PIK3AP1 (ENSCMIG00000003034)	PPP3CB (ENSCMIG00000001031)	ANXA7 (ENSCMIG00000000213)	tacr2 (ENSCMIG00000018849)	tspan15 (ENSCMIG00000018843)	rufy2 (ENSCMIG00000018841)	ENSCMIG00000018809	hkdc1 (ENSCMIG00000018771)	supv3l1 (ENSCMIG00000018743)	ENSCMIG00000018737	vps26a (ENSCMIG00000018728)	kifbp (ENSCMIG00000018725)	ENSCMIG00000018724 #22	ddx21 (ENSCMIG00000018721)	ENSCMIG00000018720 ##24	ENSCMIG00000018719	ccar1 (ENSCMIG00000018712)	ENSCMIG00000018708	hells (ENSCMIG00000018698)	pdlim1 (ENSCMIG00000018691)	SORBS1 (ENSCMIG00000018684)	alox5b.2 (ENSCMIG00000018676)	tbrg1 (ENSCMIG00000018670)
Elephant shark	MODERN SPECIES	1660													ENSCMIG00000014611	ENSCMIG00000014606	casp3a (ENSCMIG00000014603)	ENSCMIG00000014599 #22	enpp6 (ENSCMIG00000014595) #23	STOX2 (ENSCMIG00000014593) #24	ENSCMIG00000014591	ENSCMIG00000014589	ENSCMIG00000014583	ENSCMIG00000014576	ENSCMIG00000014570	ENSCMIG00000014551	ENSCMIG00000014536	ENSCMIG00000014515	trappc11 (ENSCMIG00000014490) #25	rwdd (ENSCMIG00000014478) #26	ENSCMIG00000014475	ing2 (ENSCMIG00000014472) #28	ENSCMIG00000014465 #30
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000159063 #22
Lamprey	MODERN SPECIES	200										ENSPMAG00000005553	RECQL (ENSPMAG00000005495)	has1 (ENSPMAG00000005470)	trpc4apa (ENSPMAG00000005429)	bbs2 (ENSPMAG00000005369)	ENSPMAG00000005360	irf2 (ENSPMAG00000005347) #22	ENSPMAG00000005335	ENSPMAG00000005333	HELT (ENSPMAG00000005332)	ENSPMAG00000005324	ENSPMAG00000005319	ENSPMAG00000005315	vps26a (ENSPMAG00000005292)	ENSPMAG00000005266	ENSPMAG00000005242	ENSPMAG00000005240	adipor2 (ENSPMAG00000005207)	ENSPMAG00000005204