Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000160378 #17
Sarcopterygii	ANCESTRAL SPECIES	65														ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT01030000234640	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330
Tetrapoda	ANCESTRAL SPECIES	37	ENSGT00940000161203	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT01050000246816	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES	147	ENSGT00390000001474	ENSGT00940000159702	ENSGT00390000008920.c.b	ENSGT00940000160922	ENSGT00940000161203	ENSGT00390000014835.j #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00390000001278.a #14	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.a #22	ENSGT01050000246816
Frog	MODERN SPECIES	8	SYCN (ENSXETG00000005318) #7	nccrp1 (ENSXETG00000036249) #8	pak4 (ENSXETG00000005314) #9	acp7 (ENSXETG00000029991) #10	mrps12 (ENSXETG00000005326) #11	fbxo27 (ENSXETG00000039521) #12	sars2 (ENSXETG00000005332) #13	XB5961849 [provisional:itpk1] (ENSXETG00000005334) #14	capn12 (ENSXETG00000034127) #15	ENSXETG00000047600 #16	lgals4.2 (ENSXETG00000000039) #17	actn4 (ENSXETG00000000040) #18	hnrnpl (ENSXETG00000000037) #19	ENSXETG00000048342 #20	ech1 (ENSXETG00000000036) #21	lgals4.1 (ENSXETG00000002843) #22	ENSXETG00000035555 #23	alkbh6 (ENSXETG00000002842) #24	clip3 (ENSXETG00000002780) #25	eif3k (ENSXETG00000024723) #26	tspan15 (ENSXETG00000002840) #27	map4k1 (ENSXETG00000002836) #28	ryr1 (ENSXETG00000002823) #29	arhgap11a.2 (ENSXETG00000002822) #30	rasgrp4 (ENSXETG00000002821) #31	fam98a (ENSXETG00000002820) #32	spred3 (ENSXETG00000034444) #33	ENSXETG00000042074 #34	psmd8 (ENSXETG00000002818) #35	meis3 (ENSXETG00000002807) #36	slc8a2 (ENSXETG00000002790) #37
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000021391	ENSLLEG00000021234	ENSLLEG00000021183	ENSLLEG00000020289	ENSLLEG00000020207	ENSLLEG00000020189	SAMD4B (ENSLLEG00000019903)	ENSLLEG00000019850	ENSLLEG00000019696	ENSLLEG00000019614 #15	ENSLLEG00000019550 #15	ENSLLEG00000019500	ENSLLEG00000019462	HNRNPL (ENSLLEG00000019090) #19	ENSLLEG00000019040	ENSLLEG00000018455 #22	ENSLLEG00000018139 #23	ENSLLEG00000018101	ENSLLEG00000017947 #24	ENSLLEG00000017918	PSMD8 (ENSLLEG00000017593) #35	SPRED3 (ENSLLEG00000017332) #33	ENSLLEG00000017221 #32	TSPAN15 (ENSLLEG00000017033) #27	ENSLLEG00000016994	ENSLLEG00000016973	ENSLLEG00000016742 #28	ENSLLEG00000016698 ##28	RYR1 (ENSLLEG00000016016) #29	ENSLLEG00000015913 #30	RASGRP4 (ENSLLEG00000015412) #31
Anura	ANCESTRAL SPECIES																	ENSGT00940000160378.b #17
Frog	MODERN SPECIES	8	paf1 (ENSXETG00000002902)	samd4b (ENSXETG00000002903)	gmfg (ENSXETG00000034678)	lrfn1.1 (ENSXETG00000005309)	lrfn1.2 (ENSXETG00000047270)	SYCN (ENSXETG00000005318) #7	nccrp1 (ENSXETG00000036249) #8	pak4 (ENSXETG00000005314) #9	acp7 (ENSXETG00000029991) #10	mrps12 (ENSXETG00000005326) #11	fbxo27 (ENSXETG00000039521) #12	sars2 (ENSXETG00000005332) #13	XB5961849 [provisional:itpk1] (ENSXETG00000005334) #14	capn12 (ENSXETG00000034127) #15	ENSXETG00000047600 #16	lgals4.2 (ENSXETG00000000039) #17	actn4 (ENSXETG00000000040) #18	hnrnpl (ENSXETG00000000037) #19	ENSXETG00000048342 #20	ech1 (ENSXETG00000000036) #21	lgals4.1 (ENSXETG00000002843) #22	ENSXETG00000035555 #23	alkbh6 (ENSXETG00000002842) #24	clip3 (ENSXETG00000002780) #25	eif3k (ENSXETG00000024723) #26	tspan15 (ENSXETG00000002840) #27	map4k1 (ENSXETG00000002836) #28	ryr1 (ENSXETG00000002823) #29	arhgap11a.2 (ENSXETG00000002822) #30	rasgrp4 (ENSXETG00000002821) #31	fam98a (ENSXETG00000002820) #32
Leishan spiny toad	MODERN SPECIES	98																ENSLLEG00000023844 #17
Amniota	ANCESTRAL SPECIES	34	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Mammalia	ANCESTRAL SPECIES	48	ENSGT00390000008920.c.b	ENSGT00940000160922	ENSGT00940000161203	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00990000206928	ENSGT00940000161057 #36	ENSGT00940000158344.b #37
Platypus	DUPLICATION
Platypus	MODERN SPECIES	16	ENSOANG00000037362	NCCRP1 (ENSOANG00000015297) #8	ENSOANG00000040619 #9	ENSOANG00000046740 #9	ACP7 (ENSOANG00000002725) #10	ENSOANG00000041514 #12	MRPS12 (ENSOANG00000042164) #11	SARS2 (ENSOANG00000037500) #13	ENSOANG00000050730	ENSOANG00000047743	SIRT2 (ENSOANG00000050752)	ENSOANG00000044847	ENSOANG00000044870	HNRNPL (ENSOANG00000014119) #19	ECH1 (ENSOANG00000048825) #21	ENSOANG00000041325 #17	ENSOANG00000046197 #17	ENSOANG00000003642	ENSOANG00000000347	CAPN12 (ENSOANG00000042811)	ACTN4 (ENSOANG00000036034) #18	EIF3K (ENSOANG00000012188) #26	MAP4K1 (ENSOANG00000000504) #28	RYR1 (ENSOANG00000047642) #29	RASGRP4 (ENSOANG00000037488) #31	ENSOANG00000037098 ##32	ENSOANG00000041545 #33	PSMD8 (ENSOANG00000042903) #35	ENSOANG00000003497	MEIS3 (ENSOANG00000048143) #36	SLC8A2 (ENSOANG00000040184) #37
Platypus	MODERN SPECIES	16	NCCRP1 (ENSOANG00000015297) #8	ENSOANG00000040619 #9	ENSOANG00000046740 #9	ACP7 (ENSOANG00000002725) #10	ENSOANG00000041514 #12	MRPS12 (ENSOANG00000042164) #11	SARS2 (ENSOANG00000037500) #13	ENSOANG00000050730	ENSOANG00000047743	SIRT2 (ENSOANG00000050752)	ENSOANG00000044847	ENSOANG00000044870	HNRNPL (ENSOANG00000014119) #19	ECH1 (ENSOANG00000048825) #21	ENSOANG00000041325 #17	ENSOANG00000046197 #17	ENSOANG00000003642	ENSOANG00000000347	CAPN12 (ENSOANG00000042811)	ACTN4 (ENSOANG00000036034) #18	EIF3K (ENSOANG00000012188) #26	MAP4K1 (ENSOANG00000000504) #28	RYR1 (ENSOANG00000047642) #29	RASGRP4 (ENSOANG00000037488) #31	ENSOANG00000037098 ##32	ENSOANG00000041545 #33	PSMD8 (ENSOANG00000042903) #35	ENSOANG00000003497	MEIS3 (ENSOANG00000048143) #36	SLC8A2 (ENSOANG00000040184) #37	KPTN (ENSOANG00000021752)
Theria	ANCESTRAL SPECIES	27	ENSGT00940000160922	ENSGT01050000245193	ENSGT00390000014310	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Marsupialia	ANCESTRAL SPECIES	20	ENSGT00940000160922	ENSGT01050000245193	ENSGT00390000014310	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348	ENSGT00950000182985.a.b
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000160922	ENSGT01050000245193	ENSGT00390000014310	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348	ENSGT00950000182985.a.b
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00390000008920.c.b	ENSGT00940000160922	ENSGT01050000245193	ENSGT00390000014310	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348	ENSGT00950000182985.a.b
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00390000008920.c.b	ENSGT00940000160922	ENSGT01050000245193	ENSGT00390000014310	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139.d	ENSGT00390000014139.c	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Common wonbat	MODERN SPECIES	686	SAMD4B (ENSVURG00010023352)	GMFG (ENSVURG00010023348)	LRFN1 (ENSVURG00010023346)	ENSVURG00010023343	ENSVURG00010023337	NCCRP1 (ENSVURG00010023334) #8	PAK4 (ENSVURG00010023330) #9	ACP7 (ENSVURG00010023326) #10	MRPS12 (ENSVURG00010023325) #11	SARS2 (ENSVURG00010023322) #13	NFKBIB (ENSVURG00010023321)	SIRT2 (ENSVURG00010023317)	ENSVURG00010023306	HNRNPL (ENSVURG00010023299) #19	ECH1 (ENSVURG00010023296) #21	LGALS4 (ENSVURG00010023292) #17	ENSVURG00010023288	CAPN12 (ENSVURG00010023282)	ACTN4 (ENSVURG00010023273) #18	EIF3K (ENSVURG00010023268) #26	MAP4K1 (ENSVURG00010023257) #28	RYR1 (ENSVURG00010021090) #29	RASGRP4 (ENSVURG00010020787) #31	FAM98C (ENSVURG00010020772) ##32	SPRED3 (ENSVURG00010020769) #33	PSMD8 (ENSVURG00010020765) #35	ENSVURG00010020759	ENSVURG00010020747	KCNK6 (ENSVURG00010020741)	YIF1B (ENSVURG00010020727)	ENSVURG00010020718
koala	MODERN SPECIES	8	SAMD4B (ENSPCIG00000010495)	GMFG (ENSPCIG00000010497)	LRFN1 (ENSPCIG00000010499)	ENSPCIG00000010500	SYCN (ENSPCIG00000010501) #7	ENSPCIG00000035279 #8	PAK4 (ENSPCIG00000010503) #9	ACP7 (ENSPCIG00000010512) #10	MRPS12 (ENSPCIG00000010531) #11	SARS2 (ENSPCIG00000010533) #13	NFKBIB (ENSPCIG00000010534)	SIRT2 (ENSPCIG00000010538)	ENSPCIG00000035977	HNRNPL (ENSPCIG00000010541) #19	ECH1 (ENSPCIG00000010546) #21	ENSPCIG00000010550 #17	ENSPCIG00000010559	CAPN12 (ENSPCIG00000021139)	ACTN4 (ENSPCIG00000021127) #18	ENSPCIG00000021112 #26	MAP4K1 (ENSPCIG00000021104) #28	RYR1 (ENSPCIG00000019718) #29	RASGRP4 (ENSPCIG00000019588) #31	FAM98C (ENSPCIG00000031663) ##32	PSMD8 (ENSPCIG00000019569) #35	ENSPCIG00000019563	ENSPCIG00000019560	KCNK6 (ENSPCIG00000019559)	YIF1B (ENSPCIG00000019556)	ENSPCIG00000019555	PPP1R14A (ENSPCIG00000019554)
Wallaby	MODERN SPECIES	8045														HNRNPL (ENSMEUG00000006851) #19	ENSMEUG00000006831 #21	LGALS4 (ENSMEUG00000006815) #17
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000029861	ENSSHAG00000025860	ENSSHAG00000003070	ENSSHAG00000029779	ENSSHAG00000002868	ENSSHAG00000029909	SYCN (ENSSHAG00000026425) #7	ENSSHAG00000027919 #8	PAK4 (ENSSHAG00000023058) #9	ACP7 (ENSSHAG00000008163) #10	ENSSHAG00000008081 #12	MRPS12 (ENSSHAG00000028860) #11	SARS2 (ENSSHAG00000030895) #13	HNRNPL (ENSSHAG00000007586) #19	ENSSHAG00000026003 #21	ENSSHAG00000031477 #17	ENSSHAG00000024713	ACTN4 (ENSSHAG00000006501) #18	EIF3K (ENSSHAG00000005313) #26	ENSSHAG00000004941 #28	ENSSHAG00000000089 #35	ENSSHAG00000028971 ##32	RASGRP4 (ENSSHAG00000002331) #31	ENSSHAG00000021265 #29	ENSSHAG00000022523	KCNK6 (ENSSHAG00000023201)	YIF1B (ENSSHAG00000026200)	ENSSHAG00000004664	ENSSHAG00000027742	ENSSHAG00000028687	ENSSHAG00000024997
Opossum	DUPLICATION
Opossum	MODERN SPECIES	3	ENSMODG00000023776	ENSMODG00000023777	ENSMODG00000013812	ENSMODG00000042532	ENSMODG00000039335	ENSMODG00000041694	ENSMODG00000013745	HPN (ENSMODG00000013734)	SCN1B (ENSMODG00000013729)	GRAMD1A (ENSMODG00000013725)	ENSMODG00000023784	PSMC4 (ENSMODG00000013717)	ENSMODG00000013708	FBL (ENSMODG00000013694)	DYRK1B (ENSMODG00000037375)	ENSMODG00000013689 #17	TIMM50 (ENSMODG00000013584)	SUPT5H (ENSMODG00000013570)	ENSMODG00000040786	RPS16 (ENSMODG00000013545)	ZFP36 (ENSMODG00000037525)	MED29 (ENSMODG00000013490)	ENSMODG00000013486	GMFG (ENSMODG00000013470)	LRFN1 (ENSMODG00000013463)	ENSMODG00000023790	NCCRP1 (ENSMODG00000013456) #8	PAK4 (ENSMODG00000013453) #9	ACP7 (ENSMODG00000013442) #10	ENSMODG00000013438 #12	MRPS12 (ENSMODG00000045234) #11
Opossum	MODERN SPECIES	3	MED29 (ENSMODG00000013490)	ENSMODG00000013486	GMFG (ENSMODG00000013470)	LRFN1 (ENSMODG00000013463)	ENSMODG00000023790	NCCRP1 (ENSMODG00000013456) #8	PAK4 (ENSMODG00000013453) #9	ACP7 (ENSMODG00000013442) #10	ENSMODG00000013438 #12	MRPS12 (ENSMODG00000045234) #11	SARS2 (ENSMODG00000037644) #13	NFKBIB (ENSMODG00000013429)	ENSMODG00000025574	HNRNPL (ENSMODG00000013418) #19	ECH1 (ENSMODG00000013164) #21	LGALS4 (ENSMODG00000013405) #17	ENSMODG00000038395	ENSMODG00000028254 #12	CAPN12 (ENSMODG00000013388)	ACTN4 (ENSMODG00000013370) #18	MAP4K1 (ENSMODG00000013308) #28	RYR1 (ENSMODG00000013282) #29	RASGRP4 (ENSMODG00000013190) #31	FAM98C (ENSMODG00000049877) ##32	PSMD8 (ENSMODG00000043878) #35	ENSMODG00000013144	ENSMODG00000045413	ENSMODG00000013137	KCNK6 (ENSMODG00000013130)	YIF1B (ENSMODG00000013126)	ENSMODG00000013117
Eutheria	ANCESTRAL SPECIES	28	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Primates	ANCESTRAL SPECIES	15	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Catarrhini	ANCESTRAL SPECIES		ENSGT01050000245193	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.g.a	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Hominoidea	ANCESTRAL SPECIES		ENSGT01050000245193	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000160378 #17	ENSGT00940000155398.g.a	ENSGT00940000159610 #21	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343.a #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509
Hominidae	ANCESTRAL SPECIES		ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.g.a	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343.a #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d.m #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h.c.a	ENSGT00940000155398.h.c.b	ENSGT00940000161901	ENSGT00940000159343.a #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d.m #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h.c.b	ENSGT00940000155398.h.c.a	ENSGT00940000161901	ENSGT00940000159343.a #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Pan	ANCESTRAL SPECIES	9	ENSGT01050000245193.a	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d.m #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.g.a	ENSGT00940000155398.h.d	ENSGT00940000161901	ENSGT00940000159343.a #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Chimpanzee	MODERN SPECIES	10	IFNL4 (ENSPTRG00000045236)	SYCN (ENSPTRG00000010954) #7	NCCRP1 (ENSPTRG00000010953) #8	PAK4 (ENSPTRG00000006915) #9	ACP7 (ENSPTRG00000010951) #10	FBXO27 (ENSPTRG00000010950) #12	FBXO17 (ENSPTRG00000052313)	MRPS12 (ENSPTRG00000010948) #11	SARS2 (ENSPTRG00000010947) #13	CCER2 (ENSPTRG00000044143)	NFKBIB (ENSPTRG00000010946)	SIRT2 (ENSPTRG00000010945)	RINL (ENSPTRG00000010942)	HNRNPL (ENSPTRG00000010941) #19	ECH1 (ENSPTRG00000010940) #21	LGALS4 (ENSPTRG00000010939) #17	ENSPTRG00000010938	ENSPTRG00000043344	CAPN12 (ENSPTRG00000010936)	ACTN4 (ENSPTRG00000010935) #18	EIF3K (ENSPTRG00000010934) #26	MAP4K1 (ENSPTRG00000010933) #28	RYR1 (ENSPTRG00000010931) #29	RASGRP4 (ENSPTRG00000010930) #31	FAM98C (ENSPTRG00000010929) ##32	SPRED3 (ENSPTRG00000010928) #33	GGN (ENSPTRG00000010927)	PSMD8 (ENSPTRG00000010926) #35	CATSPERG (ENSPTRG00000010925)	KCNK6 (ENSPTRG00000010924)	ENSPTRG00000049751
Bonobo	MODERN SPECIES	10	ENSPPAG00000039318	ENSPPAG00000034374	NCCRP1 (ENSPPAG00000027874) #8	PAK4 (ENSPPAG00000037143) #9	ACP7 (ENSPPAG00000030233) #10	FBXO27 (ENSPPAG00000031105) #12	FBXO17 (ENSPPAG00000043002)	MRPS12 (ENSPPAG00000041637) #11	SARS2 (ENSPPAG00000036933) #13	CCER2 (ENSPPAG00000035748)	ENSPPAG00000009968	SIRT2 (ENSPPAG00000036095)	RINL (ENSPPAG00000031245)	ENSPPAG00000038885 #19	ECH1 (ENSPPAG00000027618) #21	LGALS4 (ENSPPAG00000042034) #17	ENSPPAG00000042189	ENSPPAG00000039758	CAPN12 (ENSPPAG00000037990)	ACTN4 (ENSPPAG00000040184) #18	EIF3K (ENSPPAG00000027427) #26	MAP4K1 (ENSPPAG00000033469) #28	RYR1 (ENSPPAG00000032806) #29	RASGRP4 (ENSPPAG00000043809) #31	FAM98C (ENSPPAG00000043372) ##32	ENSPPAG00000029887 #33	GGN (ENSPPAG00000018084)	PSMD8 (ENSPPAG00000032738) #35	CATSPERG (ENSPPAG00000030743)	KCNK6 (ENSPPAG00000040894)	YIF1B (ENSPPAG00000033246)
Human	MODERN SPECIES	10	NCCRP1 (ENSG00000188505) #8	PAK4 (ENSG00000130669) #9	ACP7 (ENSG00000183760) #10	FBXO27 (ENSG00000161243) #12	FBXO17 (ENSG00000269190)	MRPS12 (ENSG00000128626) #11	ENSG00000269547	SARS2 (ENSG00000104835) #13	CCER2 (ENSG00000262484)	NFKBIB (ENSG00000104825)	SIRT2 (ENSG00000068903)	RINL (ENSG00000187994)	HNRNPL (ENSG00000104824) #19	ENSG00000268083	ECH1 (ENSG00000104823) #21	LGALS4 (ENSG00000171747) #17	LGALS7B (ENSG00000178934)	LGALS7 (ENSG00000205076)	CAPN12 (ENSG00000182472)	ACTN4 (ENSG00000130402) #18	EIF3K (ENSG00000178982) #26	MAP4K1 (ENSG00000104814) #28	RYR1 (ENSG00000196218) #29	RASGRP4 (ENSG00000171777) #31	FAM98C (ENSG00000130244) ##32	SPRED3 (ENSG00000188766) #33	GGN (ENSG00000179168)	PSMD8 (ENSG00000099341) #35	CATSPERG (ENSG00000099338)	KCNK6 (ENSG00000099337)	C19orf33 (ENSG00000167644)
Gorilla	MODERN SPECIES	10	ENSGGOG00000007532	SYCN (ENSGGOG00000006768) #7	NCCRP1 (ENSGGOG00000028030) #8	PAK4 (ENSGGOG00000009967) #9	ACP7 (ENSGGOG00000011221) #10	FBXO27 (ENSGGOG00000004829) #12	FBXO17 (ENSGGOG00000039784)	MRPS12 (ENSGGOG00000002500) #11	ENSGGOG00000002495	CCER2 (ENSGGOG00000040566)	NFKBIB (ENSGGOG00000002491)	SIRT2 (ENSGGOG00000002487)	RINL (ENSGGOG00000027782)	HNRNPL (ENSGGOG00000004067) #19	ECH1 (ENSGGOG00000003550) #21	LGALS4 (ENSGGOG00000009152) #17	LGALS7 (ENSGGOG00000009150)	LGALS7 (ENSGGOG00000009143)	ENSGGOG00000005913	ACTN4 (ENSGGOG00000005899) #18	EIF3K (ENSGGOG00000016808) #26	MAP4K1 (ENSGGOG00000016787) #28	RYR1 (ENSGGOG00000015461) #29	RASGRP4 (ENSGGOG00000004473) #31	FAM98C (ENSGGOG00000004470) ##32	ENSGGOG00000004469 #33	GGN (ENSGGOG00000004466)	PSMD8 (ENSGGOG00000004458) #35	CATSPERG (ENSGGOG00000016371)	KCNK6 (ENSGGOG00000010031)	YIF1B (ENSGGOG00000013891)
Orangutan	MODERN SPECIES	10	ENSPPYG00000040674	ENSPPYG00000039470	ENSPPYG00000037401	SYCN (ENSPPYG00000009957) #7	NCCRP1 (ENSPPYG00000009956) #8	PAK4 (ENSPPYG00000009955) #9	ACP7 (ENSPPYG00000009954) #10	FBXO27 (ENSPPYG00000009953) #12	MRPS12 (ENSPPYG00000031050) #11	SARS2 (ENSPPYG00000009949) #13	NFKBIB (ENSPPYG00000009948)	SIRT2 (ENSPPYG00000009947)	RINL (ENSPPYG00000009946)	HNRNPL (ENSPPYG00000009945) #19	ECH1 (ENSPPYG00000009944) #21	LGALS4 (ENSPPYG00000009943) #17	ENSPPYG00000030975	ENSPPYG00000037264	ACTN4 (ENSPPYG00000009939) #18	EIF3K (ENSPPYG00000009938) #26	MAP4K1 (ENSPPYG00000009937) #28	RYR1 (ENSPPYG00000009936) #29	RASGRP4 (ENSPPYG00000009935) #31	FAM98C (ENSPPYG00000009934) ##32	ENSPPYG00000009933 #33	GGN (ENSPPYG00000034106)	PSMD8 (ENSPPYG00000009931) #35	CATSPERG (ENSPPYG00000009930)	KCNK6 (ENSPPYG00000040940)	YIF1B (ENSPPYG00000009928)	C19orf33 (ENSPPYG00000009927)
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT01050000245193	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000014310.h.fb.b	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Vervet Monkey	MODERN SPECIES	25	ENSCSAG00000018540	SYCN (ENSCSAG00000018538) #7	NCCRP1 (ENSCSAG00000003907) #8	PAK4 (ENSCSAG00000003912) #9	ACP7 (ENSCSAG00000003919) #10	FBXO27 (ENSCSAG00000003925) #12	FBXO17 (ENSCSAG00000003927)	MRPS12 (ENSCSAG00000003929) #11	SARS2 (ENSCSAG00000003930) #13	CCER2 (ENSCSAG00000003932)	NFKBIB (ENSCSAG00000003938)	SIRT2 (ENSCSAG00000003944)	RINL (ENSCSAG00000003946)	HNRNPL (ENSCSAG00000003951) #19	ECH1 (ENSCSAG00000003973) #21	LGALS4 (ENSCSAG00000003986) #17	ENSCSAG00000003994	ENSCSAG00000003999	CAPN12 (ENSCSAG00000004015)	ACTN4 (ENSCSAG00000004021) #18	EIF3K (ENSCSAG00000004026) #26	MAP4K1 (ENSCSAG00000004031) #28	RYR1 (ENSCSAG00000004047) #29	RASGRP4 (ENSCSAG00000004054) #31	FAM98C (ENSCSAG00000004058) ##32	SPRED3 (ENSCSAG00000004065) #33	GGN (ENSCSAG00000004069)	PSMD8 (ENSCSAG00000004073) #35	CATSPERG (ENSCSAG00000004091)	KCNK6 (ENSCSAG00000004102)	C19orf33 (ENSCSAG00000004105)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000014310.h.fb.b	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Macaca	ANCESTRAL SPECIES	12	ENSGT00390000014310.h.fb.b	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h.h	ENSGT00940000155398.h.g	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000014310.h.fb.b.c	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h.h	ENSGT00940000155398.h.g	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Rhesus	MODERN SPECIES	10	ENSMMUG00000064570	ENSMMUG00000046698	ENSMMUG00000018760	SYCN (ENSMMUG00000061074) #7	NCCRP1 (ENSMMUG00000056327) #8	PAK4 (ENSMMUG00000013140) #9	ACP7 (ENSMMUG00000012787) #10	ENSMMUG00000014544	MRPS12 (ENSMMUG00000060269) #11	SARS2 (ENSMMUG00000028765) #13	CCER2 (ENSMMUG00000046705)	NFKBIB (ENSMMUG00000023643)	SIRT2 (ENSMMUG00000023640)	RINL (ENSMMUG00000054341)	HNRNPL (ENSMMUG00000004877) #19	LGALS4 (ENSMMUG00000028766) #17	ENSMMUG00000060638	ENSMMUG00000063783	CAPN12 (ENSMMUG00000006431)	ACTN4 (ENSMMUG00000006429) #18	EIF3K (ENSMMUG00000028767) #26	MAP4K1 (ENSMMUG00000021630) #28	ENSMMUG00000056681	RYR1 (ENSMMUG00000002897) #29	RASGRP4 (ENSMMUG00000020469) #31	FAM98C (ENSMMUG00000020468) ##32	SPRED3 (ENSMMUG00000022975) #33	GGN (ENSMMUG00000022973)	PSMD8 (ENSMMUG00000038221) #35	CATSPERG (ENSMMUG00000014273)	KCNK6 (ENSMMUG00000062296)
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000061225	SYCN (ENSMFAG00000032892) #7	ENSMFAG00000026283 #9	ENSMFAG00000053277 #9	ACP7 (ENSMFAG00000042916) #10	FBXO27 (ENSMFAG00000038590) #12	ENSMFAG00000052180	ENSMFAG00000064031	ENSMFAG00000004221	MRPS12 (ENSMFAG00000044563) #11	SARS2 (ENSMFAG00000035652) #13	CCER2 (ENSMFAG00000009500)	NFKBIB (ENSMFAG00000036991)	RINL (ENSMFAG00000044323)	ENSMFAG00000043091 #21	LGALS4 (ENSMFAG00000000473) #17	ENSMFAG00000044549	ENSMFAG00000039064	ACTN4 (ENSMFAG00000033669) #18	EIF3K (ENSMFAG00000033962) #26	MAP4K1 (ENSMFAG00000034374) #28	ENSMFAG00000050391	RASGRP4 (ENSMFAG00000040225) #31	FAM98C (ENSMFAG00000031808) ##32	SPRED3 (ENSMFAG00000031637) #33	PSMD8 (ENSMFAG00000032204) #35	CATSPERG (ENSMFAG00000046059)	KCNK6 (ENSMFAG00000032940)	YIF1B (ENSMFAG00000034102)	C19orf33 (ENSMFAG00000042648)	SPINT2 (ENSMFAG00000044848)
Pig-tailed macaque	MODERN SPECIES	218	ENSMNEG00000041118	SYCN (ENSMNEG00000015392) #7	NCCRP1 (ENSMNEG00000036307) #8	PAK4 (ENSMNEG00000032618) #9	ACP7 (ENSMNEG00000031999) #10	FBXO27 (ENSMNEG00000026180) #12	FBXO17 (ENSMNEG00000036196)	MRPS12 (ENSMNEG00000040379) #11	SARS2 (ENSMNEG00000031337) #13	CCER2 (ENSMNEG00000041019)	NFKBIB (ENSMNEG00000044754)	SIRT2 (ENSMNEG00000028764)	RINL (ENSMNEG00000042168)	HNRNPL (ENSMNEG00000039542) #19	ECH1 (ENSMNEG00000033081) #21	LGALS4 (ENSMNEG00000030232) #17	ENSMNEG00000008142	ENSMNEG00000036949	CAPN12 (ENSMNEG00000033924)	ACTN4 (ENSMNEG00000033643) #18	EIF3K (ENSMNEG00000045211) #26	MAP4K1 (ENSMNEG00000035006) #28	RYR1 (ENSMNEG00000034883) #29	RASGRP4 (ENSMNEG00000034834) #31	FAM98C (ENSMNEG00000041959) ##32	SPRED3 (ENSMNEG00000029825) #33	GGN (ENSMNEG00000009019)	PSMD8 (ENSMNEG00000031524) #35	CATSPERG (ENSMNEG00000034302)	KCNK6 (ENSMNEG00000036599)	YIF1B (ENSMNEG00000013692)
Cercopithecinae_b	ANCESTRAL SPECIES	24	ENSGT00390000014310.h.fb.b	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cercopithecinae_d	ANCESTRAL SPECIES	26	ENSGT00390000014310.h.fb.b	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h.j	ENSGT00940000155398.h.i	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Sooty mangabey	MODERN SPECIES	98	ENSCATG00000031577	SYCN (ENSCATG00000032618) #7	NCCRP1 (ENSCATG00000037680) #8	PAK4 (ENSCATG00000042065) #9	ACP7 (ENSCATG00000041917) #10	FBXO27 (ENSCATG00000042782) #12	FBXO17 (ENSCATG00000040853)	MRPS12 (ENSCATG00000038438) #11	SARS2 (ENSCATG00000035464) #13	CCER2 (ENSCATG00000033287)	NFKBIB (ENSCATG00000043107)	SIRT2 (ENSCATG00000029875)	RINL (ENSCATG00000038412)	HNRNPL (ENSCATG00000005670) #19	ECH1 (ENSCATG00000036032) #21	LGALS4 (ENSCATG00000037600) #17	ENSCATG00000042174	ENSCATG00000042496	CAPN12 (ENSCATG00000043283)	ACTN4 (ENSCATG00000029753) #18	EIF3K (ENSCATG00000030380) #26	MAP4K1 (ENSCATG00000044985) #28	RYR1 (ENSCATG00000040511) #29	RASGRP4 (ENSCATG00000035144) #31	FAM98C (ENSCATG00000023670) ##32	SPRED3 (ENSCATG00000031891) #33	GGN (ENSCATG00000034592)	PSMD8 (ENSCATG00000037726) #35	CATSPERG (ENSCATG00000036964)	KCNK6 (ENSCATG00000028859)	YIF1B (ENSCATG00000034664)
Drill	MODERN SPECIES	399	IFNL1 (ENSMLEG00000041583)	ENSMLEG00000028907	ENSMLEG00000042519	PAK4 (ENSMLEG00000041856) #9	ACP7 (ENSMLEG00000030986) #10	FBXO27 (ENSMLEG00000038847) #12	FBXO17 (ENSMLEG00000034831)	MRPS12 (ENSMLEG00000036963) #11	SARS2 (ENSMLEG00000043886) #13	CCER2 (ENSMLEG00000036339)	NFKBIB (ENSMLEG00000037830)	SIRT2 (ENSMLEG00000043627)	RINL (ENSMLEG00000039810)	HNRNPL (ENSMLEG00000031015) #19	ECH1 (ENSMLEG00000037356) #21	LGALS4 (ENSMLEG00000042333) #17	ENSMLEG00000044389	ENSMLEG00000044384	CAPN12 (ENSMLEG00000042781)	ACTN4 (ENSMLEG00000031659) #18	ENSMLEG00000041135	ENSMLEG00000043275 #26	MAP4K1 (ENSMLEG00000030747) #28	RYR1 (ENSMLEG00000039038) #29	RASGRP4 (ENSMLEG00000031986) #31	FAM98C (ENSMLEG00000042221) ##32	SPRED3 (ENSMLEG00000041952) #33	GGN (ENSMLEG00000042998)	PSMD8 (ENSMLEG00000036495) #35	CATSPERG (ENSMLEG00000035782)	KCNK6 (ENSMLEG00000028442)
Olive baboon	MODERN SPECIES	12	ENSPANG00000005739	ENSPANG00000029888	SYCN (ENSPANG00000005590) #7	NCCRP1 (ENSPANG00000012371) #8	PAK4 (ENSPANG00000015374) #9	ACP7 (ENSPANG00000016119) #10	FBXO27 (ENSPANG00000032620) #12	FBXO17 (ENSPANG00000017369)	MRPS12 (ENSPANG00000047344) #11	SARS2 (ENSPANG00000009514) #13	CCER2 (ENSPANG00000008100)	NFKBIB (ENSPANG00000005320)	SIRT2 (ENSPANG00000019522)	RINL (ENSPANG00000013635)	HNRNPL (ENSPANG00000011867) #19	ENSPANG00000047923 #17	ENSPANG00000047728	CAPN12 (ENSPANG00000009955)	ACTN4 (ENSPANG00000021674) #18	EIF3K (ENSPANG00000006758) #26	MAP4K1 (ENSPANG00000025341) #28	RASGRP4 (ENSPANG00000016161) #31	FAM98C (ENSPANG00000007584) ##32	SPRED3 (ENSPANG00000006214) #33	GGN (ENSPANG00000005444)	PSMD8 (ENSPANG00000003152) #35	CATSPERG (ENSPANG00000021675)	KCNK6 (ENSPANG00000035975)	YIF1B (ENSPANG00000005740)	C19orf33 (ENSPANG00000010968)	SPINT2 (ENSPANG00000007178)
Rhinopithecus	ANCESTRAL SPECIES	7	ENSGT00390000014310.h.ib	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.h	ENSGT00940000155398.g.a	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l.d ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.u.a #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Golden snub-nosed monkey	MODERN SPECIES	24																LGALS4 (ENSRROG00000028761) #17
Black snub-nosed monkey	MODERN SPECIES	867	ENSRBIG00000015950	SYCN (ENSRBIG00000044169) #7	NCCRP1 (ENSRBIG00000008847) #8	PAK4 (ENSRBIG00000020114) #9	ACP7 (ENSRBIG00000028402) #10	FBXO27 (ENSRBIG00000038565) #12	FBXO17 (ENSRBIG00000014766)	MRPS12 (ENSRBIG00000029741) #11	SARS2 (ENSRBIG00000033833) #13	CCER2 (ENSRBIG00000024420)	NFKBIB (ENSRBIG00000033731)	SIRT2 (ENSRBIG00000042700)	RINL (ENSRBIG00000039018)	HNRNPL (ENSRBIG00000036120) #19	ECH1 (ENSRBIG00000004382) #21	LGALS4 (ENSRBIG00000041761) #17	ENSRBIG00000043105	ENSRBIG00000043150	CAPN12 (ENSRBIG00000037742)	ACTN4 (ENSRBIG00000040525) #18	EIF3K (ENSRBIG00000042978) #26	MAP4K1 (ENSRBIG00000041282) #28	RYR1 (ENSRBIG00000042972) #29	RASGRP4 (ENSRBIG00000040975) #31	ENSRBIG00000036368 ##32	SPRED3 (ENSRBIG00000020411) #33	GGN (ENSRBIG00000037467)	PSMD8 (ENSRBIG00000032122) #35	CATSPERG (ENSRBIG00000028162)	KCNK6 (ENSRBIG00000042469)	C19orf33 (ENSRBIG00000020296)
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cebidae	ANCESTRAL SPECIES	8	ENSGT00390000014310.g.j	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.a #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cebidae_a	ANCESTRAL SPECIES	35		ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Capuchin	MODERN SPECIES	356		SYCN (ENSCCAG00000024440) #7	NCCRP1 (ENSCCAG00000024691) #8	PAK4 (ENSCCAG00000034689) #9	ACP7 (ENSCCAG00000023958) #10	FBXO27 (ENSCCAG00000026285) #12	FBXO17 (ENSCCAG00000029334)	MRPS12 (ENSCCAG00000035388) #11	SARS2 (ENSCCAG00000027866) #13	CCER2 (ENSCCAG00000037923)	NFKBIB (ENSCCAG00000032185)	SIRT2 (ENSCCAG00000022224)	RINL (ENSCCAG00000029111)	HNRNPL (ENSCCAG00000023592) #19	ECH1 (ENSCCAG00000027713) #21	LGALS4 (ENSCCAG00000036110) #17	ENSCCAG00000027824	ENSCCAG00000031362	CAPN12 (ENSCCAG00000029880)	ACTN4 (ENSCCAG00000021970) #18	EIF3K (ENSCCAG00000037084) #26	MAP4K1 (ENSCCAG00000020037) #28	RYR1 (ENSCCAG00000022435) #29	ENSCCAG00000030609	RASGRP4 (ENSCCAG00000022152) #31	FAM98C (ENSCCAG00000032150) ##32	SPRED3 (ENSCCAG00000030688) #33	GGN (ENSCCAG00000025754)	PSMD8 (ENSCCAG00000031150) #35	CATSPERG (ENSCCAG00000031815)	KCNK6 (ENSCCAG00000025471)
Bolivian squirrel monkey	MODERN SPECIES	218	IFNL1 (ENSSBOG00000023591)	ENSSBOG00000023306	ENSSBOG00000025010	NCCRP1 (ENSSBOG00000020340) #8	PAK4 (ENSSBOG00000030518) #9	ACP7 (ENSSBOG00000023950) #10	ENSSBOG00000032009 #12	FBXO17 (ENSSBOG00000028655)	MRPS12 (ENSSBOG00000025707) #11	SARS2 (ENSSBOG00000024002) #13	CCER2 (ENSSBOG00000031030)	SIRT2 (ENSSBOG00000019146)	RINL (ENSSBOG00000033119)	HNRNPL (ENSSBOG00000003822) #19	ECH1 (ENSSBOG00000019853) #21	LGALS4 (ENSSBOG00000030403) #17	ENSSBOG00000035583
Mas night monkey	MODERN SPECIES	933	ENSANAG00000024370	SYCN (ENSANAG00000029479) #7	NCCRP1 (ENSANAG00000030195) #8	PAK4 (ENSANAG00000033786) #9	ACP7 (ENSANAG00000034740) #10	FBXO27 (ENSANAG00000025016) #12	FBXO17 (ENSANAG00000028197)	MRPS12 (ENSANAG00000033654) #11	SARS2 (ENSANAG00000034330) #13	CCER2 (ENSANAG00000028189)	NFKBIB (ENSANAG00000032326)	SIRT2 (ENSANAG00000033015)	RINL (ENSANAG00000035202)	ENSANAG00000038150 #19	ECH1 (ENSANAG00000034825) #21	LGALS4 (ENSANAG00000030266) #17	ENSANAG00000030767	ENSANAG00000021513	CAPN12 (ENSANAG00000035112)	ACTN4 (ENSANAG00000030756) #18	ENSANAG00000030666 #26	MAP4K1 (ENSANAG00000031767) #28	RYR1 (ENSANAG00000023175) #29	RASGRP4 (ENSANAG00000024258) #31	FAM98C (ENSANAG00000035244) ##32	SPRED3 (ENSANAG00000035189) #33	GGN (ENSANAG00000027918)	PSMD8 (ENSANAG00000035231) #35	CATSPERG (ENSANAG00000029002)	KCNK6 (ENSANAG00000022291)	YIF1B (ENSANAG00000032458)
Tarsier	MODERN SPECIES	7264				NCCRP1 (ENSTSYG00000025658) #8	PAK4 (ENSTSYG00000025942) #9	ACP7 (ENSTSYG00000008823) #10	FBXO27 (ENSTSYG00000025748) #12	ENSTSYG00000031415	MRPS12 (ENSTSYG00000009568) #11	SARS2 (ENSTSYG00000027694) #13	CCER2 (ENSTSYG00000032453)	NFKBIB (ENSTSYG00000002445)	SIRT2 (ENSTSYG00000031402)	HNRNPL (ENSTSYG00000001402) #19	ECH1 (ENSTSYG00000003815) #21	LGALS4 (ENSTSYG00000002195) #17	LGALS7B (ENSTSYG00000030844)	ENSTSYG00000009172
Strepsirrhini	ANCESTRAL SPECIES	34	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Bushbaby	MODERN SPECIES	348	IFNL1 (ENSOGAG00000032069)	ENSOGAG00000027656	ENSOGAG00000033609	SYCN (ENSOGAG00000012191) #7	NCCRP1 (ENSOGAG00000012185) #8	PAK4 (ENSOGAG00000012180) #9	ACP7 (ENSOGAG00000008301) #10	FBXO27 (ENSOGAG00000004586) #12	FBXO17 (ENSOGAG00000008297)	ENSOGAG00000008295 #11	SARS2 (ENSOGAG00000008291) #13	NFKBIB (ENSOGAG00000008287)	SIRT2 (ENSOGAG00000008283)	RINL (ENSOGAG00000008759)	HNRNPL (ENSOGAG00000013331) #19	LGALS4 (ENSOGAG00000003271) #17	ENSOGAG00000026026
Lemuriformes	ANCESTRAL SPECIES	29	ENSGT00390000014310.g	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Mouse lemur	MODERN SPECIES	14	ENSMICG00000013325	SYCN (ENSMICG00000030399) #7	NCCRP1 (ENSMICG00000046356) #8	PAK4 (ENSMICG00000013952) #9	ACP7 (ENSMICG00000013945) #10	FBXO17 (ENSMICG00000010032)	MRPS12 (ENSMICG00000045111) #11	SARS2 (ENSMICG00000033729) #13	CCER2 (ENSMICG00000033685)	NFKBIB (ENSMICG00000035284)	SIRT2 (ENSMICG00000008583)	RINL (ENSMICG00000042105)	ENSMICG00000034344	HNRNPL (ENSMICG00000017378) #19	ECH1 (ENSMICG00000017377) #21	LGALS4 (ENSMICG00000017375) #17	ENSMICG00000045911	ENSMICG00000043790	CAPN12 (ENSMICG00000017372)	ACTN4 (ENSMICG00000016495) #18	EIF3K (ENSMICG00000016490) #26	MAP4K1 (ENSMICG00000016445) #28	RYR1 (ENSMICG00000027127) #29	RASGRP4 (ENSMICG00000004249) #31	FAM98C (ENSMICG00000004244) ##32	SPRED3 (ENSMICG00000027687) #33	GGN (ENSMICG00000004481)	PSMD8 (ENSMICG00000041917) #35	CATSPERG (ENSMICG00000004443)	KCNK6 (ENSMICG00000047785)	YIF1B (ENSMICG00000004434)
Lemuriformes_a	ANCESTRAL SPECIES	54	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01050000245856	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.eb.b #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Coquerels sifaka	MODERN SPECIES	689	LRFN1 (ENSPCOG00000000141)	IFNL1 (ENSPCOG00000021805)	ENSPCOG00000013435	NCCRP1 (ENSPCOG00000011634) #8	PAK4 (ENSPCOG00000014081) #9	ACP7 (ENSPCOG00000028212) #10	FBXO17 (ENSPCOG00000028741)	MRPS12 (ENSPCOG00000020370) #11	ENSPCOG00000016910	CCER2 (ENSPCOG00000026584)	NFKBIB (ENSPCOG00000016919)	SIRT2 (ENSPCOG00000017435)	RINL (ENSPCOG00000025436)	HNRNPL (ENSPCOG00000025068) #19	ECH1 (ENSPCOG00000006684) #21	LGALS4 (ENSPCOG00000023005) #17	ENSPCOG00000014935	ENSPCOG00000016704	CAPN12 (ENSPCOG00000026306)	ACTN4 (ENSPCOG00000026477) #18	EIF3K (ENSPCOG00000018532) #26	MAP4K1 (ENSPCOG00000010741) #28	RYR1 (ENSPCOG00000018060) #29	RASGRP4 (ENSPCOG00000013808) #31	FAM98C (ENSPCOG00000024380) ##32	SPRED3 (ENSPCOG00000000592) #33	GGN (ENSPCOG00000026285)	PSMD8 (ENSPCOG00000021828) #35	ENSPCOG00000023748	CATSPERG (ENSPCOG00000019353)	KCNK6 (ENSPCOG00000018410)
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	2457																ENSPSMG00000002505 #17
Greater bamboo lemur	MODERN SPECIES	866	IFNL1 (ENSPSMG00000023351)	ENSPSMG00000023362	ENSPSMG00000023370	ENSPSMG00000023378 #7	NCCRP1 (ENSPSMG00000023393) #8	PAK4 (ENSPSMG00000023420) #9	ACP7 (ENSPSMG00000023453) #10	FBXO17 (ENSPSMG00000023459)	MRPS12 (ENSPSMG00000023466) #11	SARS2 (ENSPSMG00000023511) #13	NFKBIB (ENSPSMG00000023543)	SIRT2 (ENSPSMG00000023612)	RINL (ENSPSMG00000023659)	ENSPSMG00000023666 #19	ECH1 (ENSPSMG00000023694) #21	ENSPSMG00000023719 #17
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Tree shrew	MODERN SPECIES	3824													RINL (ENSTBEG00000016785)	HNRNPL (ENSTBEG00000016563) #19	ECH1 (ENSTBEG00000016349) #21	ENSTBEG00000016174 #17
Glires	ANCESTRAL SPECIES	6	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Lagomorpha	ANCESTRAL SPECIES	127	ENSGT00940000160922	ENSGT00390000014310.g	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17
Rabbit	MODERN SPECIES	16	ENSOCUG00000027681	LRFN1 (ENSOCUG00000024825)	ENSOCUG00000012894	ENSOCUG00000034595 #7	NCCRP1 (ENSOCUG00000011658) #8	PAK4 (ENSOCUG00000011285) #9	ACP7 (ENSOCUG00000011277) #10	FBXO27 (ENSOCUG00000000688) #12	FBXO17 (ENSOCUG00000024196)	MRPS12 (ENSOCUG00000000689) #11	SARS2 (ENSOCUG00000000687) #13	ENSOCUG00000036152	NFKBIB (ENSOCUG00000024218)	SIRT2 (ENSOCUG00000027924)	HNRNPL (ENSOCUG00000002943) #19	LGALS4 (ENSOCUG00000000515) #17	ZNF260 (ENSOCUG00000029144)	ZNF566 (ENSOCUG00000005050)	ZFP82 (ENSOCUG00000011716)	ZFP14 (ENSOCUG00000017838)	ENSOCUG00000038506	ENSOCUG00000029606	ZNF568 (ENSOCUG00000038373)	ENSOCUG00000035222	ENSOCUG00000021288	ZNF793 (ENSOCUG00000028997)	ZNF570 (ENSOCUG00000029052)	ZNF569 (ENSOCUG00000003568)	ZNF527 (ENSOCUG00000029050)	ZNF383 (ENSOCUG00000029068)	ENSOCUG00000032129
Pika	MODERN SPECIES	3746														HNRNPL (ENSOPRG00000002586) #19	ECH1 (ENSOPRG00000002553) #21	LGALS4 (ENSOPRG00000002531) #17	ENSOPRG00000002523	ENSOPRG00000002508
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Muroidea	ANCESTRAL SPECIES	18	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cricetidae	ANCESTRAL SPECIES	26	ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cricetinae	ANCESTRAL SPECIES	34	ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00700000104635	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Chinese hamster chok1gshd	MODERN SPECIES	295	ENSCGRG00001004540	ENSCGRG00001021596	Sycn (ENSCGRG00001009732) #7	Nccrp1 (ENSCGRG00001019721) #8	Pak4 (ENSCGRG00001016351) #9	Acp7 (ENSCGRG00001011519) #10	Fbxo27 (ENSCGRG00001020869) #12	Fbxo17 (ENSCGRG00001020723)	Mrps12 (ENSCGRG00001018968) #11	Sars2 (ENSCGRG00001022604) #13	Ccer2 (ENSCGRG00001009620)	Nfkbib (ENSCGRG00001004264)	Sirt2 (ENSCGRG00001020566)	Hnrnpl (ENSCGRG00001000438) #19	Ech1 (ENSCGRG00001017412) #21	Lgals4 (ENSCGRG00001016455) #17	Lgals7 (ENSCGRG00001010514)	Capn12 (ENSCGRG00001016362)	Actn4 (ENSCGRG00001012859) #18	Eif3k (ENSCGRG00001017721) #26	Map4k1 (ENSCGRG00001020669) #28	Ryr1 (ENSCGRG00001021163) #29	Rasgrp4 (ENSCGRG00001016177) #31	Fam98c (ENSCGRG00001013657) ##32	Spred3 (ENSCGRG00001011612) #33	ENSCGRG00001010858	Psmd8 (ENSCGRG00001000155) #35	ENSCGRG00001009785	Kcnk6 (ENSCGRG00001018614)	ENSCGRG00001014007	Yif1b (ENSCGRG00001022015)
Cricetidae_B	ANCESTRAL SPECIES	25	ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Prairie vole	MODERN SPECIES	186	Lrfn1 (ENSMOCG00000005220)	Sycn (ENSMOCG00000015903) #7	Nccrp1 (ENSMOCG00000003931) #8	Pak4 (ENSMOCG00000009611) #9	Acp7 (ENSMOCG00000015334) #10	Fbxo27 (ENSMOCG00000009748) #12	ENSMOCG00000002233	Mrps12 (ENSMOCG00000012666) #11	Sars2 (ENSMOCG00000002784) #13	Ccer2 (ENSMOCG00000019468)	Nfkbib (ENSMOCG00000010516)	Sirt2 (ENSMOCG00000013313)	Rinl (ENSMOCG00000012059)	Hnrnpl (ENSMOCG00000013029) #19	Ech1 (ENSMOCG00000018124) #21	Lgals4 (ENSMOCG00000011683) #17	ENSMOCG00000014599	Lgals7 (ENSMOCG00000005033)	Capn12 (ENSMOCG00000016934)	Actn4 (ENSMOCG00000014399) #18	Eif3k (ENSMOCG00000000223) #26	Map4k1 (ENSMOCG00000002993) #28	Ryr1 (ENSMOCG00000000489) #29
Northern American deer mouse	MODERN SPECIES		Plekha4 (ENSPEMG00000015575)	Ppp1r15a (ENSPEMG00000013886)	ENSPEMG00000024852	Nucb1 (ENSPEMG00000017991)	ENSPEMG00000030270	Fbxo27 (ENSPEMG00000009419) #12	Fbxo17 (ENSPEMG00000012092)	Mrps12 (ENSPEMG00000016700) #11	Sars2 (ENSPEMG00000012004) #13	Ccer2 (ENSPEMG00000010618)	Nfkbib (ENSPEMG00000001096)	Sirt2 (ENSPEMG00000018255)	Rinl (ENSPEMG00000006696)	Hnrnpl (ENSPEMG00000013840) #19	Ech1 (ENSPEMG00000016875) #21	ENSPEMG00000013614 #17	Lgals7 (ENSPEMG00000014015)	Capn12 (ENSPEMG00000010832)	Actn4 (ENSPEMG00000007795) #18	Eif3k (ENSPEMG00000003416) #26	Map4k1 (ENSPEMG00000009782) #28	Ryr1 (ENSPEMG00000017966) #29	Rasgrp4 (ENSPEMG00000002336) #31	Fam98c (ENSPEMG00000018935) ##32	Spred3 (ENSPEMG00000025916) #33	Ggn (ENSPEMG00000011000)	Psmd8 (ENSPEMG00000001149) #35	ENSPEMG00000008652	Kcnk6 (ENSPEMG00000024306)	Yif1b (ENSPEMG00000015573)	ENSPEMG00000028627
Murinae	ANCESTRAL SPECIES	19	ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Mus	ANCESTRAL SPECIES		ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Mus_A	ANCESTRAL SPECIES	1	ENSGT00390000014310.h.rb	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139.k	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0029450	MGP_CAROLIEiJ_G0029451	Sycn (MGP_CAROLIEiJ_G0029452) #7	Nccrp1 (MGP_CAROLIEiJ_G0029453) #8	MGP_CAROLIEiJ_G0029454 #10	Fbxo27 (MGP_CAROLIEiJ_G0029455) #12	Fbxo17 (MGP_CAROLIEiJ_G0029456)	Mrps12 (MGP_CAROLIEiJ_G0029457) #11	Sars2 (MGP_CAROLIEiJ_G0029458) #13	Ccer2 (MGP_CAROLIEiJ_G0029459)	Nfkbib (MGP_CAROLIEiJ_G0029460)	Sirt2 (MGP_CAROLIEiJ_G0029461)	Rinl (MGP_CAROLIEiJ_G0029462)	Hnrnpl (MGP_CAROLIEiJ_G0029463) #19	Ech1 (MGP_CAROLIEiJ_G0029464) #21	Lgals4 (MGP_CAROLIEiJ_G0029465) #17	Lgals7 (MGP_CAROLIEiJ_G0029466)	Capn12 (MGP_CAROLIEiJ_G0029467)	Actn4 (MGP_CAROLIEiJ_G0029468) #18	Eif3k (MGP_CAROLIEiJ_G0029469) #26	Map4k1 (MGP_CAROLIEiJ_G0029470) #28	Ryr1 (MGP_CAROLIEiJ_G0029471) #29	Rasgrp4 (MGP_CAROLIEiJ_G0029472) #31	Fam98c (MGP_CAROLIEiJ_G0029473) ##32	Spred3 (MGP_CAROLIEiJ_G0029474) #33	Ggn (MGP_CAROLIEiJ_G0029475)	MGP_CAROLIEiJ_G0029476 #35	Kcnk6 (MGP_CAROLIEiJ_G0029477)	Yif1b (MGP_CAROLIEiJ_G0029478)	2200002D01Rik (MGP_CAROLIEiJ_G0029479)	Spint2 (MGP_CAROLIEiJ_G0029480)
Mus_B	ANCESTRAL SPECIES		ENSGT00390000014310.h.rb.e.a	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139.k	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Mouse	MODERN SPECIES	16	Ifnl3 (ENSMUSG00000060747)	Sycn (ENSMUSG00000084174) #7	Nccrp1 (ENSMUSG00000047586) #8	Pak4 (ENSMUSG00000030602) #9	Acp7 (ENSMUSG00000037469) #10	Fbxo27 (ENSMUSG00000037463) #12	Fbxo17 (ENSMUSG00000030598)	Mrps12 (ENSMUSG00000045948) #11	Sars2 (ENSMUSG00000070699) #13	Ccer2 (ENSMUSG00000096257)	Nfkbib (ENSMUSG00000030595)	Sirt2 (ENSMUSG00000015149)	Rinl (ENSMUSG00000051735)	Hnrnpl (ENSMUSG00000015165) #19	Ech1 (ENSMUSG00000053898) #21	Lgals4 (ENSMUSG00000053964) #17	Lgals7 (ENSMUSG00000053522)	Capn12 (ENSMUSG00000054083)	Actn4 (ENSMUSG00000054808) #18	Eif3k (ENSMUSG00000053565) #26	Map4k1 (ENSMUSG00000037337) #28	Ryr1 (ENSMUSG00000030592) #29	Rasgrp4 (ENSMUSG00000030589) #31	Fam98c (ENSMUSG00000030590) ##32	Spred3 (ENSMUSG00000037239) #33	Ggn (ENSMUSG00000031493)	Psmd8 (ENSMUSG00000030591) #35	Catsperg1 (ENSMUSG00000049676)	Kcnk6 (ENSMUSG00000046410)	Yif1b (ENSMUSG00000030588)	2200002D01Rik (ENSMUSG00000030587)
Mus_C	ANCESTRAL SPECIES	15	ENSGT00390000014310.h.rb.e.b	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639	ENSGT00940000160348
spretus	MODERN SPECIES	16	Gmfg (MGP_SPRETEiJ_G0030546)	MGP_SPRETEiJ_G0030547	Sycn (MGP_SPRETEiJ_G0030548) #7	Nccrp1 (MGP_SPRETEiJ_G0030549) #8	MGP_SPRETEiJ_G0030550 #10	Fbxo27 (MGP_SPRETEiJ_G0030551) #12	Fbxo17 (MGP_SPRETEiJ_G0030552)	Mrps12 (MGP_SPRETEiJ_G0030553) #11	Sars2 (MGP_SPRETEiJ_G0030554) #13	Ccer2 (MGP_SPRETEiJ_G0030555)	Nfkbib (MGP_SPRETEiJ_G0030556)	Sirt2 (MGP_SPRETEiJ_G0030557)	Rinl (MGP_SPRETEiJ_G0030558)	Hnrnpl (MGP_SPRETEiJ_G0030559) #19	Ech1 (MGP_SPRETEiJ_G0030560) #21	Lgals4 (MGP_SPRETEiJ_G0030561) #17	Lgals7 (MGP_SPRETEiJ_G0030562)	Capn12 (MGP_SPRETEiJ_G0030563)	Actn4 (MGP_SPRETEiJ_G0030564) #18	Eif3k (MGP_SPRETEiJ_G0030565) #26	MGP_SPRETEiJ_G0030566 #28	Ryr1 (MGP_SPRETEiJ_G0030567) #29	Rasgrp4 (MGP_SPRETEiJ_G0030568) #31	Fam98c (MGP_SPRETEiJ_G0030569) ##32	Spred3 (MGP_SPRETEiJ_G0030570) #33	Ggn (MGP_SPRETEiJ_G0030571)	Psmd8 (MGP_SPRETEiJ_G0030572) #35	Kcnk6 (MGP_SPRETEiJ_G0030574)	Yif1b (MGP_SPRETEiJ_G0030575)	2200002D01Rik (MGP_SPRETEiJ_G0030576)	Spint2 (MGP_SPRETEiJ_G0030577)
Steppe mouse	MODERN SPECIES	2811	ENSMSIG00000000564	ENSMSIG00000000550	Sycn (ENSMSIG00000000534) #7	Nccrp1 (ENSMSIG00000000499) #8	Pak4 (ENSMSIG00000000463) #9	Fbxo27 (ENSMSIG00000000305) #12	Fbxo17 (ENSMSIG00000000155)	Mrps12 (ENSMSIG00000000095) #11	Sars2 (ENSMSIG00000000032) #13	Ccer2 (ENSMSIG00000023487)	Nfkbib (ENSMSIG00000023464)	ENSMSIG00000023341	Rinl (ENSMSIG00000023292)	Hnrnpl (ENSMSIG00000023230) #19	Ech1 (ENSMSIG00000023202) #21	Lgals4 (ENSMSIG00000023107) #17	Lgals7 (ENSMSIG00000023097)	Capn12 (ENSMSIG00000023060)	ENSMSIG00000022938 #18	Eif3k (ENSMSIG00000022874) #26	Map4k1 (ENSMSIG00000022680) #28	Ryr1 (ENSMSIG00000021903) #29	Rasgrp4 (ENSMSIG00000020311) #31	Fam98c (ENSMSIG00000020290) ##32	Spred3 (ENSMSIG00000020276) #33	Ggn (ENSMSIG00000020266)	Psmd8 (ENSMSIG00000020246) #35
Shrew mouse	MODERN SPECIES		Gmfg (MGP_PahariEiJ_G0012684)	Lrfn1 (MGP_PahariEiJ_G0012685)	Sycn (MGP_PahariEiJ_G0012686) #7	Nccrp1 (MGP_PahariEiJ_G0012687) #8	MGP_PahariEiJ_G0012688 #10	Fbxo27 (MGP_PahariEiJ_G0012689) #12	Fbxo17 (MGP_PahariEiJ_G0012690)	Mrps12 (MGP_PahariEiJ_G0012691) #11	Sars2 (MGP_PahariEiJ_G0012692) #13	Ccer2 (MGP_PahariEiJ_G0012693)	Nfkbib (MGP_PahariEiJ_G0012694)	Sirt2 (MGP_PahariEiJ_G0012695)	Rinl (MGP_PahariEiJ_G0012696)	Hnrnpl (MGP_PahariEiJ_G0012697) #19	Ech1 (MGP_PahariEiJ_G0012698) #21	Lgals4 (MGP_PahariEiJ_G0012699) #17	Lgals7 (MGP_PahariEiJ_G0012700)	Capn12 (MGP_PahariEiJ_G0012701)	Actn4 (MGP_PahariEiJ_G0012702) #18	Eif3k (MGP_PahariEiJ_G0012703) #26	Map4k1 (MGP_PahariEiJ_G0012704) #28	Ryr1 (MGP_PahariEiJ_G0012705) #29	Rasgrp4 (MGP_PahariEiJ_G0012706) #31	Fam98c (MGP_PahariEiJ_G0012707) ##32	Spred3 (MGP_PahariEiJ_G0012708) #33	Ggn (MGP_PahariEiJ_G0012709)	Psmd8 (MGP_PahariEiJ_G0012710) #35	Kcnk6 (MGP_PahariEiJ_G0012711)	Yif1b (MGP_PahariEiJ_G0012712)	2200002D01Rik (MGP_PahariEiJ_G0012713)	Spint2 (MGP_PahariEiJ_G0012714)
Rat	MODERN SPECIES		Ifnl3 (ENSRNOG00000071068)	Sycn (ENSRNOG00000019879) #7	Nccrp1 (ENSRNOG00000054506) #8	Pak4 (ENSRNOG00000019883) #9	Acp7 (ENSRNOG00000047901) #10	Fbxo27 (ENSRNOG00000050453) #12	Fbxo17 (ENSRNOG00000019942)	Mrps12 (ENSRNOG00000019949) #11	Sars2 (ENSRNOG00000019962) #13	Ccer2 (ENSRNOG00000046971)	Nfkbib (ENSRNOG00000020063)	Sirt2 (ENSRNOG00000020102)	Rinl (ENSRNOG00000025354)	Hnrnpl (ENSRNOG00000020235) #19	Ech1 (ENSRNOG00000020308) #21	Lgals4 (ENSRNOG00000020338) #17	Lgals7 (ENSRNOG00000020380)	Capn12 (ENSRNOG00000020389)	Actn4 (ENSRNOG00000020433) #18	Eif3k (ENSRNOG00000020495) #26	Map4k1 (ENSRNOG00000020505) #28	Ryr1 (ENSRNOG00000020557) #29	Rasgrp4 (ENSRNOG00000033744) #31	Fam98c (ENSRNOG00000024036) ##32	Spred3 (ENSRNOG00000051915) #33	Ggn (ENSRNOG00000023931)	Psmd8 (ENSRNOG00000037580) #35	Catsperg (ENSRNOG00000060693)	Kcnk6 (ENSRNOG00000020598)	Yif1b (ENSRNOG00000055286)	LOC100361913 (ENSRNOG00000056651)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1672	ENSNGAG00000020468	ENSNGAG00000023112	Sycn (ENSNGAG00000019277) #7	Nccrp1 (ENSNGAG00000023271) #8	Pak4 (ENSNGAG00000016690) #9	Acp7 (ENSNGAG00000018564) #10	Fbxo27 (ENSNGAG00000022083) #12	Mrps12 (ENSNGAG00000022099) #11	Sars2 (ENSNGAG00000007723) #13	Ccer2 (ENSNGAG00000002468)	Nfkbib (ENSNGAG00000023007)	Sirt2 (ENSNGAG00000020590)	Rinl (ENSNGAG00000020775)	Hnrnpl (ENSNGAG00000022643) #19	Ech1 (ENSNGAG00000013824) #21	Lgals4 (ENSNGAG00000019563) #17	Lgals7 (ENSNGAG00000013304)	Capn12 (ENSNGAG00000021544)	Actn4 (ENSNGAG00000023185) #18	Eif3k (ENSNGAG00000018749) #26	Map4k1 (ENSNGAG00000010126) #28	Ryr1 (ENSNGAG00000011311) #29	Rasgrp4 (ENSNGAG00000021392) #31	Fam98c (ENSNGAG00000023101) ##32	Spred3 (ENSNGAG00000020995) #33	Ggn (ENSNGAG00000001339)	Psmd8 (ENSNGAG00000021956) #35	ENSNGAG00000023085	Kcnk6 (ENSNGAG00000016632)	ENSNGAG00000018977	Yif1b (ENSNGAG00000022628)
Lesser Egyptian jerboa	MODERN SPECIES	186	Paf1 (ENSJJAG00000011843)	Samd4b (ENSJJAG00000013902)	Gmfg (ENSJJAG00000016675)	Lrfn1 (ENSJJAG00000017488)	Sycn (ENSJJAG00000018087) #7	Nccrp1 (ENSJJAG00000012605) #8	Pak4 (ENSJJAG00000015294) #9	Acp7 (ENSJJAG00000015913) #10	Mrps12 (ENSJJAG00000017837) #11	Sars2 (ENSJJAG00000018250) #13	Ccer2 (ENSJJAG00000019203)	Nfkbib (ENSJJAG00000019592)	Sirt2 (ENSJJAG00000012731)	Hnrnpl (ENSJJAG00000014638) #19	Ech1 (ENSJJAG00000015932) #21	Lgals4 (ENSJJAG00000017962) #17	Lgals7 (ENSJJAG00000009833)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.m #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Marmotini	ANCESTRAL SPECIES	7	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.m #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Marmotini_b	ANCESTRAL SPECIES	47	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682.m #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Squirrel	MODERN SPECIES	261	ENSSTOG00000013026	SYCN (ENSSTOG00000000873) #7	NCCRP1 (ENSSTOG00000025063) #8	ENSSTOG00000028802 #9	ACP7 (ENSSTOG00000001701) #10	FBXO27 (ENSSTOG00000027765) #12	ENSSTOG00000021599	MRPS12 (ENSSTOG00000009006) #11	SARS2 (ENSSTOG00000027120) #13	CCER2 (ENSSTOG00000029414)	NFKBIB (ENSSTOG00000005642)	SIRT2 (ENSSTOG00000020829)	RINL (ENSSTOG00000000164)	HNRNPL (ENSSTOG00000005618) #19	ENSSTOG00000030366 #21	LGALS4 (ENSSTOG00000019467) #17	ENSSTOG00000032155	LIPT1 (ENSSTOG00000027199)	MITD1 (ENSSTOG00000015085)	ENSSTOG00000033815	LYG2 (ENSSTOG00000006998)	LYG1 (ENSSTOG00000014651)	TXNDC9 (ENSSTOG00000014270)	EIF5B (ENSSTOG00000014283)	REV1 (ENSSTOG00000014323)	AFF3 (ENSSTOG00000012140)	LONRF2 (ENSSTOG00000012203)	CHST10 (ENSSTOG00000012211)	NMS (ENSSTOG00000031548)	ENSSTOG00000024006	NPAS2 (ENSSTOG00000008934)
Arctic ground squirrel	MODERN SPECIES	523		SYCN (ENSUPAG00010009499) #7	NCCRP1 (ENSUPAG00010009503) #8	PAK4 (ENSUPAG00010009510) #9	ACP7 (ENSUPAG00010009531) #10	FBXO27 (ENSUPAG00010009545) #12	ENSUPAG00010009554	MRPS12 (ENSUPAG00010009562) #11	SARS2 (ENSUPAG00010009567) #13	CCER2 (ENSUPAG00010009588)	NFKBIB (ENSUPAG00010009598)	SIRT2 (ENSUPAG00010009610)	RINL (ENSUPAG00010009691)	HNRNPL (ENSUPAG00010009703) #19	ECH1 (ENSUPAG00010009756) #21	LGALS4 (ENSUPAG00010009767) #17	ENSUPAG00010009797	CAPN12 (ENSUPAG00010009800)	ACTN4 (ENSUPAG00010009820) #18	EIF3K (ENSUPAG00010009910) #26	MAP4K1 (ENSUPAG00010009959) #28	RYR1 (ENSUPAG00010010066) #29	RASGRP4 (ENSUPAG00010010633) #31	FAM98C (ENSUPAG00010011219) ##32	SPRED3 (ENSUPAG00010011233) #33	GGN (ENSUPAG00010011239)	ENSUPAG00010011246 #35	ENSUPAG00010011280	KCNK6 (ENSUPAG00010011284)	YIF1B (ENSUPAG00010011287)	ENSUPAG00010011314
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000000106	SYCN (ENSMMMG00000000128) #7	NCCRP1 (ENSMMMG00000000154) #8	ENSMMMG00000000186 #9	ACP7 (ENSMMMG00000000202) #10	FBXO27 (ENSMMMG00000000249) #12	FBXO17 (ENSMMMG00000000277)	MRPS12 (ENSMMMG00000000334) #11	ENSMMMG00000000347	ENSMMMG00000000354	NFKBIB (ENSMMMG00000000364)	SIRT2 (ENSMMMG00000000373)	RINL (ENSMMMG00000000383)	HNRNPL (ENSMMMG00000000422) #19	ECH1 (ENSMMMG00000000501) #21	LGALS4 (ENSMMMG00000000515) #17	ENSMMMG00000000563	CAPN12 (ENSMMMG00000000586)	ACTN4 (ENSMMMG00000000635) #18	EIF3K (ENSMMMG00000000730) #26	MAP4K1 (ENSMMMG00000000803) #28	RYR1 (ENSMMMG00000001288) #29	RASGRP4 (ENSMMMG00000002503) #31	ENSMMMG00000003484 ##32	SPRED3 (ENSMMMG00000003499) #33	ENSMMMG00000003566	ENSMMMG00000003575 #35	CATSPERG (ENSMMMG00000003619)	ENSMMMG00000003832	YIF1B (ENSMMMG00000003840)	C19orf33 (ENSMMMG00000003948)
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005025354	ENSSVLG00005025336	SYCN (ENSSVLG00005025322) #7	NCCRP1 (ENSSVLG00005025312) #8	PAK4 (ENSSVLG00005025284) #9	FBXO27 (ENSSVLG00005025219) #12	FBXO17 (ENSSVLG00005025193)	MRPS12 (ENSSVLG00005025177) #11	SARS2 (ENSSVLG00005025163) #13	CCER2 (ENSSVLG00005025128)	NFKBIB (ENSSVLG00005025113)	SIRT2 (ENSSVLG00005025082)	RINL (ENSSVLG00005025026)	ENSSVLG00005024990 #19	ECH1 (ENSSVLG00005024943) #21	LGALS4 (ENSSVLG00005024923) #17	ENSSVLG00005024884	EIF3K (ENSSVLG00005024574) #26	MAP4K1 (ENSSVLG00005024279) #28	RYR1 (ENSSVLG00005023258) #29	RASGRP4 (ENSSVLG00005021471) #31	FAM98C (ENSSVLG00005021047) ##32	SPRED3 (ENSSVLG00005020970) #33	GGN (ENSSVLG00005020920)	ENSSVLG00005020813 #35	ENSSVLG00005019877	KCNK6 (ENSSVLG00005019285)	YIF1B (ENSSVLG00005019017)	C19orf33 (ENSSVLG00005018912)	SPINT2 (ENSSVLG00005018807)	PPP1R14A (ENSSVLG00005018672)
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Naked mole-rat female	MODERN SPECIES	20	ENSHGLG00000018072 #8	PAK4 (ENSHGLG00000019005) #9	ACP7 (ENSHGLG00000017298) #10	FBXO27 (ENSHGLG00000013053) #12	ENSHGLG00000040079	ENSHGLG00000047142	FBXO17 (ENSHGLG00000014988)	MRPS12 (ENSHGLG00000014942) #11	SARS2 (ENSHGLG00000009655) #13	CCER2 (ENSHGLG00000047785)	NFKBIB (ENSHGLG00000008534)	SIRT2 (ENSHGLG00000007241)	RINL (ENSHGLG00000005666)	HNRNPL (ENSHGLG00000010210) #19	ECH1 (ENSHGLG00000008397) #21	LGALS4 (ENSHGLG00000007411) #17	ENSHGLG00000035651	LGALS7B (ENSHGLG00000036733)	CAPN12 (ENSHGLG00000005576)	ACTN4 (ENSHGLG00000008428) #18	EIF3K (ENSHGLG00000006367) #26	MAP4K1 (ENSHGLG00000008057) #28	RYR1 (ENSHGLG00000013838) #29	RASGRP4 (ENSHGLG00000013164) #31	FAM98C (ENSHGLG00000036758) ##32	SPRED3 (ENSHGLG00000017813) #33	GGN (ENSHGLG00000018526)	PSMD8 (ENSHGLG00000039062) #35	ENSHGLG00000037506	ENSHGLG00000044851	ENSHGLG00000014449
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00900000143260
Guinea pig	MODERN SPECIES	52	ENSCPOG00000027455	ENSCPOG00000008143	NCCRP1 (ENSCPOG00000033054) #8	PAK4 (ENSCPOG00000027079) #9	ACP7 (ENSCPOG00000006292) #10	ENSCPOG00000035190 #12	FBXO17 (ENSCPOG00000000656)	MRPS12 (ENSCPOG00000035217) #11	SARS2 (ENSCPOG00000008471) #13	CCER2 (ENSCPOG00000035278)	NFKBIB (ENSCPOG00000013186)	SIRT2 (ENSCPOG00000011320)	RINL (ENSCPOG00000011316)	HNRNPL (ENSCPOG00000007652) #19	ENSCPOG00000007646 #21	LGALS4 (ENSCPOG00000020645) #17	ENSCPOG00000032616	ENSCPOG00000034785	CAPN12 (ENSCPOG00000014228)	ACTN4 (ENSCPOG00000011903) #18	ENSCPOG00000011897 #26	MAP4K1 (ENSCPOG00000015672) #28	RYR1 (ENSCPOG00000015669) #29	RASGRP4 (ENSCPOG00000033500) #31	ENSCPOG00000005585 ##32	SPRED3 (ENSCPOG00000039574) #33	GGN (ENSCPOG00000026857)	PSMD8 (ENSCPOG00000011009) #35	ENSCPOG00000031048	Kcnk6 (ENSCPOG00000030720)	ENSCPOG00000006693
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409.fb #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00900000143260
Degu	MODERN SPECIES	124	PAK4 (ENSODEG00000016224) #9	ACP7 (ENSODEG00000016249) #10	ENSODEG00000016119	ENSODEG00000020331	ENSODEG00000016668 #12	ENSODEG00000016211	FBXO17 (ENSODEG00000016209)	MRPS12 (ENSODEG00000016161) #11	SARS2 (ENSODEG00000016702) #13	CCER2 (ENSODEG00000015798)	NFKBIB (ENSODEG00000016640)	SIRT2 (ENSODEG00000015940)	RINL (ENSODEG00000016033)	ENSODEG00000016343 #19	ECH1 (ENSODEG00000015924) #21	LGALS4 (ENSODEG00000016527) #17	ENSODEG00000016155	CAPN12 (ENSODEG00000017330)	ENSODEG00000015873 #18	ENSODEG00000015952 #26	MAP4K1 (ENSODEG00000015953) #28	RYR1 (ENSODEG00000015840) #29	RASGRP4 (ENSODEG00000016270) #31	ENSODEG00000015757 ##32	ENSODEG00000016135 #33	GGN (ENSODEG00000015336)	PSMD8 (ENSODEG00000015452) #35	CATSPERG (ENSODEG00000015628)	KCNK6 (ENSODEG00000015457)	YIF1B (ENSODEG00000015413)	SPINT2 (ENSODEG00000015870)
Long-tailed chinchilla	MODERN SPECIES	175	LRFN1 (ENSCLAG00000011529)	ENSCLAG00000014797	SYCN (ENSCLAG00000014890) #7	NCCRP1 (ENSCLAG00000014969) #8	PAK4 (ENSCLAG00000014905) #9	ACP7 (ENSCLAG00000011286) #10	FBXO27 (ENSCLAG00000011616) #12	FBXO17 (ENSCLAG00000013127)	MRPS12 (ENSCLAG00000013286) #11	SARS2 (ENSCLAG00000016477) #13	NFKBIB (ENSCLAG00000016338)	SIRT2 (ENSCLAG00000013560)	RINL (ENSCLAG00000012988)	HNRNPL (ENSCLAG00000012402) #19	ENSCLAG00000013437 #21	LGALS4 (ENSCLAG00000012623) #17	CAPN12 (ENSCLAG00000011759)	ACTN4 (ENSCLAG00000012608) #18	EIF3K (ENSCLAG00000012529) #26	MAP4K1 (ENSCLAG00000012702) #28	RYR1 (ENSCLAG00000017292) #29	RASGRP4 (ENSCLAG00000010251) #31	ENSCLAG00000011123 ##32	SPRED3 (ENSCLAG00000013431) #33	GGN (ENSCLAG00000013190)	ENSCLAG00000010560 #35	ENSCLAG00000013731	KCNK6 (ENSCLAG00000015047)	YIF1B (ENSCLAG00000013932)	ENSCLAG00000009949	SPINT2 (ENSCLAG00000011188)
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT01050000245193	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Eulipotyphla	ANCESTRAL SPECIES	857														ENSGT00940000162381	ENSGT00940000159610 #21	ENSGT00940000160378 #17
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	6216														RINL (ENSSARG00000005691)	ECH1 (ENSSARG00000005657) #21	ENSSARG00000005610 #17
Common shrew	MODERN SPECIES	13256																ENSSARG00000013754 #17
Hedgehog	MODERN SPECIES	14189																LGALS4 (ENSEEUG00000012119) #17
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Suina	ANCESTRAL SPECIES	2	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Pig	MODERN SPECIES	14	NCCRP1 (ENSSSCG00000026407) #8	PAK4 (ENSSSCG00000021333) #9	ACP7 (ENSSSCG00000002971) #10	ENSSSCG00000048014 #12	ENSSSCG00000002969 #12	ENSSSCG00000002968 #12	FBXO17 (ENSSSCG00000038805)	MRPS12 (ENSSSCG00000031860) #11	SARS2 (ENSSSCG00000002972) #13	CCER2 (ENSSSCG00000047060)	NFKBIB (ENSSSCG00000026904)	SIRT2 (ENSSSCG00000026794)	RINL (ENSSSCG00000022692)	HNRNPL (ENSSSCG00000035570) #19	ECH1 (ENSSSCG00000028943) #21	LGALS4 (ENSSSCG00000022017) #17	ENSSSCG00000061096	ENSSSCG00000024281	CAPN12 (ENSSSCG00000002967)	ACTN4 (ENSSSCG00000002965) #18	ENSSSCG00000002963 #26	MAP4K1 (ENSSSCG00000002962) #28	RYR1 (ENSSSCG00000058790) #29	RASGRP4 (ENSSSCG00000002960) #31	FAM98C (ENSSSCG00000002959) ##32	SPRED3 (ENSSSCG00000035216) #33	GGN (ENSSSCG00000002957)	PSMD8 (ENSSSCG00000036658) #35	CATSPERG (ENSSSCG00000002955)	KCNK6 (ENSSSCG00000038902)	YIF1B (ENSSSCG00000002952)
Chacoan peccary	MODERN SPECIES	104	ENSCWAG00000016418	ENSCWAG00000016462	SYCN (ENSCWAG00000016550) #7	NCCRP1 (ENSCWAG00000016579) #8	PAK4 (ENSCWAG00000016634) #9	ACP7 (ENSCWAG00000016696) #10	FBXO17 (ENSCWAG00000016851)	MRPS12 (ENSCWAG00000016871) #11	SARS2 (ENSCWAG00000016908) #13	CCER2 (ENSCWAG00000017411)	NFKBIB (ENSCWAG00000017454)	SIRT2 (ENSCWAG00000017509)	RINL (ENSCWAG00000017552)	HNRNPL (ENSCWAG00000017668) #19	ECH1 (ENSCWAG00000017716) #21	LGALS4 (ENSCWAG00000017758) #17	ENSCWAG00000017964	CAPN12 (ENSCWAG00000018004)	ACTN4 (ENSCWAG00000018098) #18	EIF3K (ENSCWAG00000018283) #26	MAP4K1 (ENSCWAG00000018674) #28	RYR1 (ENSCWAG00000000348) #29	RASGRP4 (ENSCWAG00000001080) #31	FAM98C (ENSCWAG00000002510) ##32	SPRED3 (ENSCWAG00000002537) #33	GGN (ENSCWAG00000002545)	PSMD8 (ENSCWAG00000002558) #35	CATSPERG (ENSCWAG00000002596)	KCNK6 (ENSCWAG00000002662)	YIF1B (ENSCWAG00000002683)	C19orf33 (ENSCWAG00000002738)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Camelidae	ANCESTRAL SPECIES	15	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.k.b #12	ENSGT00940000161841.k.a.a #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639	ENSGT00940000160348	ENSGT00950000182985.a.b
Alpaca	MODERN SPECIES	1981																ENSVPAG00000005087 #17
Arabian camel	MODERN SPECIES	35	PAK4 (ENSCDRG00005015593) #9	ACP7 (ENSCDRG00005015493) #10	ENSCDRG00005015358 #12	ENSCDRG00005015258 #12	ENSCDRG00005015144 #12	ENSCDRG00005015104 #12	FBXO17 (ENSCDRG00005015045)	MRPS12 (ENSCDRG00005015018) #11	SARS2 (ENSCDRG00005014669) #13	ENSCDRG00005014590	NFKBIB (ENSCDRG00005014520)	SIRT2 (ENSCDRG00005014318)	RINL (ENSCDRG00005014257)	HNRNPL (ENSCDRG00005014033) #19	ECH1 (ENSCDRG00005013936) #21	LGALS4 (ENSCDRG00005013854) #17	ENSCDRG00005013811	ENSCDRG00005013735	ENSCDRG00005013679	ENSCDRG00005013525	ACTN4 (ENSCDRG00005012973) #18	EIF3K (ENSCDRG00005011700) #26	ENSCDRG00005011595	ENSCDRG00005011556	ENSCDRG00005011536 #26	ENSCDRG00005011498	RASGRP4 (ENSCDRG00005003048) #31	FAM98C (ENSCDRG00005002881) ##32	SPRED3 (ENSCDRG00005002811) #33	GGN (ENSCDRG00005002793)	PSMD8 (ENSCDRG00005002772) #35
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.i.b #12	ENSGT00940000161841.i.a.b.a #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.j #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000162455	ENSGT00550000075103.a #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.j #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000162455	ENSGT00550000075103.a #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.j #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000162455	ENSGT00550000075103.a #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.`b	ENSGT00940000155398.ab	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Dolphin	DUPLICATION
Dolphin	MODERN SPECIES	1894								FBXO17 (ENSTTRG00000011795)	MRPS12 (ENSTTRG00000011794) #11	SARS2 (ENSTTRG00000011792) #13	NFKBIB (ENSTTRG00000011790)	SIRT2 (ENSTTRG00000011788)	RINL (ENSTTRG00000011786)	HNRNPL (ENSTTRG00000011783) #19	ECH1 (ENSTTRG00000011781) #21	ENSTTRG00000011778 #17
Dolphin	MODERN SPECIES	4330																ENSTTRG00000017083 #17
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.j #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000162455	ENSGT00550000075103.a #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.`b	ENSGT00940000155398.ab	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Vaquita	MODERN SPECIES	10	ENSPSNG00000021812	ENSPSNG00000021827	SYCN (ENSPSNG00000021842) #7	NCCRP1 (ENSPSNG00000021855) #8	PAK4 (ENSPSNG00000021887) #9	ACP7 (ENSPSNG00000021928) #10	ENSPSNG00000021955 #12	FBXO17 (ENSPSNG00000021983)	ENSPSNG00000021999 #11	SARS2 (ENSPSNG00000022013) #13	CCER2 (ENSPSNG00000022040)	NFKBIB (ENSPSNG00000022063)	SIRT2 (ENSPSNG00000022093)	RINL (ENSPSNG00000022127)	HNRNPL (ENSPSNG00000022143) #19	LGALS4 (ENSPSNG00000022161) #17	ENSPSNG00000012873	ENSPSNG00000012934	ENSPSNG00000013007	ACTN4 (ENSPSNG00000013244) #18	EIF3K (ENSPSNG00000013880) #26	MAP4K1 (ENSPSNG00000014240) #28	ENSPSNG00000015191 #29	RASGRP4 (ENSPSNG00000015970) #31	FAM98C (ENSPSNG00000018271) ##32	SPRED3 (ENSPSNG00000018331) #33	GGN (ENSPSNG00000018433)	PSMD8 (ENSPSNG00000018483) #35	CATSPERG (ENSPSNG00000018723)	KCNK6 (ENSPSNG00000019519)	YIF1B (ENSPSNG00000019570)
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.j #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000162455	ENSGT00550000075103.a #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.`b	ENSGT00940000155398.ab	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Narwhal	MODERN SPECIES	296	SYCN (ENSMMNG00015000393) #7	NCCRP1 (ENSMMNG00015000377) #8	PAK4 (ENSMMNG00015000314) #9	ACP7 (ENSMMNG00015000261) #10	ENSMMNG00015000216 #12	ENSMMNG00015000173 #12	FBXO17 (ENSMMNG00015000136)	ENSMMNG00015000116 #11	SARS2 (ENSMMNG00015000076) #13	CCER2 (ENSMMNG00015000057)	NFKBIB (ENSMMNG00015000037)	SIRT2 (ENSMMNG00015004635)	RINL (ENSMMNG00015004610)	HNRNPL (ENSMMNG00015004603) #19	ECH1 (ENSMMNG00015004595) #21	LGALS4 (ENSMMNG00015004586) #17	ENSMMNG00015004579	ENSMMNG00015004574	ACTN4 (ENSMMNG00015004444) #18	ENSMMNG00015004397 #26	ENSMMNG00015004382 #26	MAP4K1 (ENSMMNG00015004318) #28	RYR1 (ENSMMNG00015004190) #29	RASGRP4 (ENSMMNG00015003640) #31	FAM98C (ENSMMNG00015003341) ##32	SPRED3 (ENSMMNG00015003301) #33	GGN (ENSMMNG00015003276)	PSMD8 (ENSMMNG00015003251) #35	CATSPERG (ENSMMNG00015003144)	KCNK6 (ENSMMNG00015003072)	YIF1B (ENSMMNG00015003004)
Beluga whale	MODERN SPECIES	14	SYCN (ENSDLEG00000014128) #7	NCCRP1 (ENSDLEG00000014145) #8	PAK4 (ENSDLEG00000014183) #9	ENSDLEG00000014219 #10	ENSDLEG00000014258 #12	ENSDLEG00000014276 #12	FBXO17 (ENSDLEG00000014382)	MRPS12 (ENSDLEG00000014400) #11	SARS2 (ENSDLEG00000014419) #13	CCER2 (ENSDLEG00000014470)	NFKBIB (ENSDLEG00000014482)	SIRT2 (ENSDLEG00000014494)	RINL (ENSDLEG00000014544)	HNRNPL (ENSDLEG00000014578) #19	ECH1 (ENSDLEG00000014659) #21	LGALS4 (ENSDLEG00000014682) #17	ENSDLEG00000014716	ACTN4 (ENSDLEG00000014790) #18	EIF3K (ENSDLEG00000014930) #26	MAP4K1 (ENSDLEG00000014991) #28	RYR1 (ENSDLEG00000016145) #29	RASGRP4 (ENSDLEG00000021708) #31	FAM98C (ENSDLEG00000021742) ##32	SPRED3 (ENSDLEG00000021745) #33	GGN (ENSDLEG00000021747)	PSMD8 (ENSDLEG00000021749) #35	CATSPERG (ENSDLEG00000021753)	KCNK6 (ENSDLEG00000021756)	YIF1B (ENSDLEG00000021757)	ENSDLEG00000021760	SPINT2 (ENSDLEG00000021761)
Sperm whale	MODERN SPECIES	8	PAF1 (ENSPCTG00005008093)	SAMD4B (ENSPCTG00005008151)	GMFG (ENSPCTG00005008254)	LRFN1 (ENSPCTG00005008674)	ENSPCTG00005008707	ENSPCTG00005008892 #12	FBXO17 (ENSPCTG00005008958)	MRPS12 (ENSPCTG00005009008) #11	SARS2 (ENSPCTG00005009065) #13	CCER2 (ENSPCTG00005009554)	NFKBIB (ENSPCTG00005009602)	SIRT2 (ENSPCTG00005009688)	RINL (ENSPCTG00005009967)	HNRNPL (ENSPCTG00005010149) #19	ECH1 (ENSPCTG00005010195) #21	LGALS4 (ENSPCTG00005010249) #17	LGALS7B (ENSPCTG00005010368)	ENSPCTG00005010400	PRR12 (ENSPCTG00005010439)	RRAS (ENSPCTG00005010605)	ENSPCTG00005010658	ENSPCTG00005010678	IRF3 (ENSPCTG00005010716)	BCL2L12 (ENSPCTG00005010802)	PRMT1 (ENSPCTG00005010926)	ADM5 (ENSPCTG00005011058)	CPT1C (ENSPCTG00005011091)	TSKS (ENSPCTG00005011160)	ENSPCTG00005011263	ENSPCTG00005011339	PPFIA3 (ENSPCTG00005011438)
Pecora	DUPLICATION
Pecora	DUPLICATION
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000015485 #10	ENSGT00940000161841.i.b #12	ENSGT00940000161841.i.a.b.a #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT00980000199302	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Yarkand deer	MODERN SPECIES	27	ENSCHYG00000027101	SYCN (ENSCHYG00000027100) #7	NCCRP1 (ENSCHYG00000027099) #8	PAK4 (ENSCHYG00000027097) #9	ACP7 (ENSCHYG00000027094) #10	ENSCHYG00000027092	ENSCHYG00000027090 #12	ENSCHYG00000027085 #12	ENSCHYG00000027084	FBXO17 (ENSCHYG00000027082)	MRPS12 (ENSCHYG00000027081) #11	SARS2 (ENSCHYG00000027076) #13	NFKBIB (ENSCHYG00000027071)	SIRT2 (ENSCHYG00000027070)	HNRNPL (ENSCHYG00000027055) #19	LGALS4 (ENSCHYG00000027048) #17	ENSCHYG00000027047	ENSCHYG00000027042	ENSCHYG00000027039	CAPN12 (ENSCHYG00000027037)	ACTN4 (ENSCHYG00000027014) #18	EIF3K (ENSCHYG00000026990) #26	MAP4K1 (ENSCHYG00000026960) #28	RYR1 (ENSCHYG00000011834) #29	RASGRP4 (ENSCHYG00000010426) #31	FAM98C (ENSCHYG00000010292) ##32	SPRED3 (ENSCHYG00000010167) #33	GGN (ENSCHYG00000010049)	ENSCHYG00000009872 #35	ENSCHYG00000009831	CATSPERG (ENSCHYG00000008916)
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000015485 #10	ENSGT00940000161841.i.b #12	ENSGT00940000161841.i.a.b.a #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT00980000199302	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000169578
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.i.b #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT00980000199302	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000169578
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.i.b.b #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT00980000199302	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398.lb.a	ENSGT00940000155398.lb.b	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Bos	ANCESTRAL SPECIES	4	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.i.b.b #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT00980000199302	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398.lb.a	ENSGT00940000155398.lb.b	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139.n	ENSGT00940000160509	ENSGT00390000009423.b
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.i.b.b #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT00980000199302	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398.lb.a	ENSGT00940000155398.lb.b	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139.n	ENSGT00940000160509	ENSGT00390000009423.b
Domestic yak	MODERN SPECIES	12	PAK4 (ENSBGRG00000024897) #9	ACP7 (ENSBGRG00000024960) #10	ENSBGRG00000025020 #12	ENSBGRG00000025065 #12	ENSBGRG00000025071 #12	ENSBGRG00000025101 #12	FBXO17 (ENSBGRG00000025140)	MRPS12 (ENSBGRG00000025176) #11	SARS2 (ENSBGRG00000025226) #13	CCER2 (ENSBGRG00000025519)	NFKBIB (ENSBGRG00000025538)	SIRT2 (ENSBGRG00000025551)	RINL (ENSBGRG00000025574)	HNRNPL (ENSBGRG00000025608) #19	ECH1 (ENSBGRG00000025648) #21	ENSBGRG00000025672 #17	ENSBGRG00000025694	ENSBGRG00000025700	CAPN12 (ENSBGRG00000025724)	ACTN4 (ENSBGRG00000025747) #18	ENSBGRG00000025829 #26	MAP4K1 (ENSBGRG00000025864) #28	RASGRP4 (ENSBGRG00000026552) #31	FAM98C (ENSBGRG00000026625) ##32	SPRED3 (ENSBGRG00000026632) #33	GGN (ENSBGRG00000026634)	PSMD8 (ENSBGRG00000026638) #35	CATSPERG (ENSBGRG00000026648)	KCNK6 (ENSBGRG00000026653)	YIF1B (ENSBGRG00000026659)	ENSBGRG00000026666
Wild yak	MODERN SPECIES	331	ENSBMUG00000014879 #9	ACP7 (ENSBMUG00000014777) #10	ENSBMUG00000014756 #12	ENSBMUG00000014732 #12	ENSBMUG00000014672 #12	ENSBMUG00000014641	ENSBMUG00000014635	MRPS12 (ENSBMUG00000014625) #11	SARS2 (ENSBMUG00000014601) #13	CCER2 (ENSBMUG00000014576)	NFKBIB (ENSBMUG00000014563)	SIRT2 (ENSBMUG00000014538)	RINL (ENSBMUG00000014490)	HNRNPL (ENSBMUG00000014475) #19	ECH1 (ENSBMUG00000014449) #21	ENSBMUG00000014405 #17
Bos_b	ANCESTRAL SPECIES	68															ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398.mb
Cow	MODERN SPECIES	9	NCCRP1 (ENSBTAG00000014296) #8	PAK4 (ENSBTAG00000013958) #9	ACP7 (ENSBTAG00000012590) #10	ENSBTAG00000049752 #12	ENSBTAG00000053706 #12	ENSBTAG00000054968	FBXO17 (ENSBTAG00000049203)	MRPS12 (ENSBTAG00000001782) #11	SARS2 (ENSBTAG00000001780) #13	CCER2 (ENSBTAG00000046295)	NFKBIB (ENSBTAG00000001778)	SIRT2 (ENSBTAG00000001776)	RINL (ENSBTAG00000001775)	HNRNPL (ENSBTAG00000001055) #19	ECH1 (ENSBTAG00000016313) #21	LGALS4 (ENSBTAG00000016312) #17	ENSBTAG00000050377	ENSBTAG00000052748	ENSBTAG00000054234	CAPN12 (ENSBTAG00000013239)	ACTN4 (ENSBTAG00000011215) #18	EIF3K (ENSBTAG00000011212) #26	MAP4K1 (ENSBTAG00000021145) #28	RYR1 (ENSBTAG00000006999) #29	RASGRP4 (ENSBTAG00000006998) #31	FAM98C (ENSBTAG00000039593) ##32	SPRED3 (ENSBTAG00000017678) #33	GGN (ENSBTAG00000005363)	PSMD8 (ENSBTAG00000031641) #35	CATSPERG (ENSBTAG00000000621)	ENSBTAG00000052394
American bison	MODERN SPECIES	3196	ENSBBBG00000018962 #9	ACP7 (ENSBBBG00000004831) #10	ENSBBBG00000019002 #12	ENSBBBG00000007041 #12	ENSBBBG00000004879 #12	ENSBBBG00000004882	ENSBBBG00000004887	MRPS12 (ENSBBBG00000019085) #11	SARS2 (ENSBBBG00000019116) #13	CCER2 (ENSBBBG00000019125)	NFKBIB (ENSBBBG00000004922)	SIRT2 (ENSBBBG00000019186)	RINL (ENSBBBG00000007042)	HNRNPL (ENSBBBG00000019232) #19	ECH1 (ENSBBBG00000004975) #21	ENSBBBG00000019259 #17	ENSBBBG00000004985	ENSBBBG00000019272	CAPN12 (ENSBBBG00000019318)	ACTN4 (ENSBBBG00000008015) #18	EIF3K (ENSBBBG00000005263) #26	MAP4K1 (ENSBBBG00000019635) #28	RYR1 (ENSBBBG00000020405) #29	RASGRP4 (ENSBBBG00000006913) #31	FAM98C (ENSBBBG00000020752) ##32	SPRED3 (ENSBBBG00000020766) #33	PSMD8 (ENSBBBG00000020823) #35	CATSPERG (ENSBBBG00000021148)	KCNK6 (ENSBBBG00000005668)	YIF1B (ENSBBBG00000021245)	SPINT2 (ENSBBBG00000021261)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.i.b #12	ENSGT00940000161841.i.a.a.a #12	ENSGT00940000161841.i.a.a.b #12	ENSGT01100000266347	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.m.a #17	ENSGT00940000155398.jb	ENSGT00940000155398.kb	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Goat	MODERN SPECIES	9	ENSCHIG00000018495	SYCN (ENSCHIG00000026169) #7	NCCRP1 (ENSCHIG00000019683) #8	PAK4 (ENSCHIG00000015290) #9	ACP7 (ENSCHIG00000017750) #10	ENSCHIG00000026990	ENSCHIG00000008903	FBXO17 (ENSCHIG00000026851)	MRPS12 (ENSCHIG00000013852) #11	SARS2 (ENSCHIG00000024636) #13	NFKBIB (ENSCHIG00000022857)	SIRT2 (ENSCHIG00000019782)	RINL (ENSCHIG00000000763)	HNRNPL (ENSCHIG00000021275) #19	ECH1 (ENSCHIG00000025593) #21	LGALS4 (ENSCHIG00000014603) #17	ENSCHIG00000023823	ENSCHIG00000018247	CAPN12 (ENSCHIG00000025421)	ACTN4 (ENSCHIG00000011102) #18	EIF3K (ENSCHIG00000023163) #26	MAP4K1 (ENSCHIG00000012238) #28	RYR1 (ENSCHIG00000014164) #29	RASGRP4 (ENSCHIG00000027087) #31	FAM98C (ENSCHIG00000019659) ##32	SPRED3 (ENSCHIG00000027252) #33	GGN (ENSCHIG00000017540)	PSMD8 (ENSCHIG00000026335) #35	CATSPERG (ENSCHIG00000011318)	KCNK6 (ENSCHIG00000021596)	YIF1B (ENSCHIG00000013902)
Rambouillet Sheep	MODERN SPECIES	5	ENSOARG00020024523	SYCN (ENSOARG00020024509) #7	NCCRP1 (ENSOARG00020024490) #8	ACP7 (ENSOARG00020024434) #10	ENSOARG00020024378 #12	ENSOARG00020024360 #12	ENSOARG00020024311 #12	ENSOARG00020024289	FBXO17 (ENSOARG00020024267)	MRPS12 (ENSOARG00020024260) #11	SARS2 (ENSOARG00020024219) #13	CCER2 (ENSOARG00020024194)	NFKBIB (ENSOARG00020024165)	SIRT2 (ENSOARG00020024118)	ECH1 (ENSOARG00020023994) #19	LGALS4 (ENSOARG00020023962) #17	ENSOARG00020023920	ENSOARG00020023904	CAPN12 (ENSOARG00020023766)	ACTN4 (ENSOARG00020023353) #18	EIF3K (ENSOARG00020023200) #26	MAP4K1 (ENSOARG00020022985) #28	RYR1 (ENSOARG00020021448) #29	RASGRP4 (ENSOARG00020017469) #31	FAM98C (ENSOARG00020017181) ##32	SPRED3 (ENSOARG00020017011) #33	PSMD8 (ENSOARG00020016783) #35	CATSPERG (ENSOARG00020015126)	KCNK6 (ENSOARG00020015049)	YIF1B (ENSOARG00020014827)	ENSOARG00020014802
Siberian musk deer	DUPLICATION
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	124	SYCN (ENSMMSG00000002151) #7	NCCRP1 (ENSMMSG00000002163) #8	PAK4 (ENSMMSG00000002189) #9	ACP7 (ENSMMSG00000002221) #10	ENSMMSG00000002279 #12	ENSMMSG00000002287	FBXO17 (ENSMMSG00000002295)	MRPS12 (ENSMMSG00000002321) #11	SARS2 (ENSMMSG00000002351) #13	CCER2 (ENSMMSG00000002464)	NFKBIB (ENSMMSG00000002488)	SIRT2 (ENSMMSG00000002515)	RINL (ENSMMSG00000002562)	HNRNPL (ENSMMSG00000002599) #19	ECH1 (ENSMMSG00000002649) #21	ENSMMSG00000002692 #17	ENSMMSG00000002723	ENSMMSG00000002738	CAPN12 (ENSMMSG00000002758)	ACTN4 (ENSMMSG00000002816) #18	ENSMMSG00000002896 #26	MAP4K1 (ENSMMSG00000002996) #28	RYR1 (ENSMMSG00000003207) #29	RASGRP4 (ENSMMSG00000003608) #31	FAM98C (ENSMMSG00000003718) ##32	SPRED3 (ENSMMSG00000003762) #33	GGN (ENSMMSG00000003781)	PSMD8 (ENSMMSG00000003804) #35	CATSPERG (ENSMMSG00000003887)	KCNK6 (ENSMMSG00000004133)	YIF1B (ENSMMSG00000004150)
Siberian musk deer	MODERN SPECIES	1222	ENSMMSG00000018966	SYNPR (ENSMMSG00000019035)	SNTN (ENSMMSG00000019427)	ENSMMSG00000019453	C3orf49 (ENSMMSG00000019471)	THOC7 (ENSMMSG00000019508)	ATXN7 (ENSMMSG00000019544)	PSMD6 (ENSMMSG00000019578)	PRICKLE2 (ENSMMSG00000019648)	ENSMMSG00000019702	ADAMTS9 (ENSMMSG00000019756)	ENSMMSG00000020165	MAGI1 (ENSMMSG00000020250)	SLC25A26 (ENSMMSG00000021168)	LRIG1 (ENSMMSG00000021235)	ENSMMSG00000021329 #17	KBTBD8 (ENSMMSG00000021352)	ENSMMSG00000021399	SUCLG2 (ENSMMSG00000021420)	TAFA1 (ENSMMSG00000021464)	TAFA4 (ENSMMSG00000021498)	EOGT (ENSMMSG00000021538)	TMF1 (ENSMMSG00000013641)	UBA3 (ENSMMSG00000013729)	ARL6IP5 (ENSMMSG00000013836)	LMOD3 (ENSMMSG00000013861)	FRMD4B (ENSMMSG00000013878)	MITF (ENSMMSG00000013971)	MDFIC2 (ENSMMSG00000014534)	FOXP1 (ENSMMSG00000014620)	EIF4E3 (ENSMMSG00000015972)
Siberian musk deer	MODERN SPECIES	355	CUTA (ENSMMSG00000023317)	SYNGAP1 (ENSMMSG00000023343)	ZBTB9 (ENSMMSG00000023399)	BAK1 (ENSMMSG00000023407)	ENSMMSG00000023420	ITPR3 (ENSMMSG00000023429)	ENSMMSG00000023443	IP6K3 (ENSMMSG00000023458)	LEMD2 (ENSMMSG00000023465)	MLN (ENSMMSG00000023475)	GRM4 (ENSMMSG00000023487)	HMGA1 (ENSMMSG00000023513)	SMIM29 (ENSMMSG00000023520)	NUDT3 (ENSMMSG00000023528)	RPS10 (ENSMMSG00000023536)	ENSMMSG00000023552 #17	PACSIN1 (ENSMMSG00000023558)	SPDEF (ENSMMSG00000023570)	ENSMMSG00000023583	SNRPC (ENSMMSG00000023609)	BLTP3A (ENSMMSG00000023628)	ENSMMSG00000023647	TAF11 (ENSMMSG00000023653)	ANKS1A (ENSMMSG00000023673)	TCP11 (ENSMMSG00000023721)	SCUBE3 (ENSMMSG00000023749)	ZNF76 (ENSMMSG00000023755)	DEF6 (ENSMMSG00000023768)	PPARD (ENSMMSG00000023777)	FANCE (ENSMMSG00000004572)	ENSMMSG00000004639
Pecora	ANCESTRAL SPECIES																	ENSGT00940000160378.m.b #17
Percora_a	ANCESTRAL SPECIES																	ENSGT00940000160378.m.b #17
Bovidae	ANCESTRAL SPECIES																	ENSGT00940000160378.m.b #17
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000163295	ENSGT00940000162456.o.a	ENSGT00940000162456.o.b	ENSGT01100000263548.b.b	ENSGT00940000162024	ENSGT00940000162263	ENSGT00390000008314	ENSGT00390000014875	ENSGT00390000008957	ENSGT00940000159861	ENSGT00390000014091	ENSGT00950000182846.b.q	ENSGT01020000230401.b.b	ENSGT00940000155364	ENSGT00940000155577	ENSGT00940000160378.m.b #17	ENSGT00940000157834	ENSGT00390000015189	ENSGT00940000158383	ENSGT00390000012037	ENSGT00940000156606	ENSGT00940000159318	ENSGT00940000155280.a	ENSGT00390000003248.a.b.a.a	ENSGT00940000160872	ENSGT00390000017673.a	ENSGT00940000157696	ENSGT00940000162979	ENSGT00390000008825.a	ENSGT00390000009925.a	ENSGT00390000016224.j.b
Bos	ANCESTRAL SPECIES	9	ENSGT00940000162456.o.a	ENSGT00960000188323	ENSGT00940000162456.o.b	ENSGT01100000263548.b.b	ENSGT00940000162024	ENSGT00940000162263	ENSGT00390000008314	ENSGT00390000014875	ENSGT00390000008957	ENSGT00940000159861	ENSGT00390000014091	ENSGT00950000182846.b.q	ENSGT01020000230401.b.b	ENSGT00940000155364	ENSGT00940000155577	ENSGT00940000160378.m.b #17	ENSGT00940000157834	ENSGT00390000015189	ENSGT00940000158383	ENSGT00390000012037	ENSGT00940000156606	ENSGT00940000159318	ENSGT00940000155280.a	ENSGT00390000003248.a.b.a.a	ENSGT00940000160872	ENSGT00390000017673.a	ENSGT00940000157696	ENSGT00940000162979	ENSGT00390000008825.a	ENSGT00390000009925.a	ENSGT00390000016224.j.b
Bos_a	ANCESTRAL SPECIES	13	ENSGT00940000162456.o.a	ENSGT00960000188323	ENSGT00940000162456.o.b	ENSGT01100000263548.b.b	ENSGT00940000162024	ENSGT00940000162263	ENSGT00390000008314	ENSGT00390000014875	ENSGT00390000008957	ENSGT00940000159861	ENSGT00390000014091	ENSGT00950000182846.b.q	ENSGT01020000230401.b.b	ENSGT00940000155364	ENSGT00940000155577	ENSGT00940000160378.m.b #17	ENSGT00940000157834	ENSGT00390000015189	ENSGT00940000158383	ENSGT00390000012037	ENSGT00940000156606	ENSGT00940000159318	ENSGT00940000155280.a	ENSGT00940000160872	ENSGT00390000017673.a	ENSGT00940000157696	ENSGT00940000162979	ENSGT00390000008825.a	ENSGT00390000009925.a	ENSGT00390000016224.j.b	ENSGT00940000156610
Domestic yak	MODERN SPECIES	18	ENSBGRG00000023593	ENSBGRG00000023562	ENSBGRG00000023404	OR2C1 (ENSBGRG00000023387)	ZNF174 (ENSBGRG00000023242)	ENSBGRG00000023231	NAA60 (ENSBGRG00000023178)	C16orf90 (ENSBGRG00000023154)	CLUAP1 (ENSBGRG00000022708)	NLRC3 (ENSBGRG00000022542)	SLX4 (ENSBGRG00000022270)	DNASE1 (ENSBGRG00000022207)	TRAP1 (ENSBGRG00000021774)	CREBBP (ENSBGRG00000016725)	ADCY9 (ENSBGRG00000016377)	ENSBGRG00000016279 #17	SRL (ENSBGRG00000016134)	TFAP4 (ENSBGRG00000016073)	GLIS2 (ENSBGRG00000015957)	PAM16 (ENSBGRG00000015868)	VASN (ENSBGRG00000015841)	DNAJA3 (ENSBGRG00000015126)	NMRAL1 (ENSBGRG00000014975)	HMOX2 (ENSBGRG00000014893)	CDIP1 (ENSBGRG00000014748)	C16orf96 (ENSBGRG00000014559)	UBALD1 (ENSBGRG00000014511)	MGRN1 (ENSBGRG00000014270)	ENSBGRG00000014218	NUDT16L1 (ENSBGRG00000014137)	ANKS3 (ENSBGRG00000013894)
Wild yak	MODERN SPECIES	1270	ENSBMUG00000001203	ENSBMUG00000001214	ENSBMUG00000001224	ENSBMUG00000001234	OR2C1 (ENSBMUG00000001240)	ZNF174 (ENSBMUG00000001276)	NAA60 (ENSBMUG00000001294)	C16orf90 (ENSBMUG00000001306)	CLUAP1 (ENSBMUG00000001464)	NLRC3 (ENSBMUG00000001556)	SLX4 (ENSBMUG00000001580)	DNASE1 (ENSBMUG00000001661)	TRAP1 (ENSBMUG00000001739)	CREBBP (ENSBMUG00000002711)	ADCY9 (ENSBMUG00000003086)	ENSBMUG00000003097 #17	SRL (ENSBMUG00000003106)	TFAP4 (ENSBMUG00000003121)	GLIS2 (ENSBMUG00000003138)	PAM16 (ENSBMUG00000003167)	CORO7 (ENSBMUG00000003266)	VASN (ENSBMUG00000003305)
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000162456.o.a	ENSGT00960000188323	ENSGT00940000162456.o.b	ENSGT01100000263548.b.b	ENSGT00940000162024	ENSGT00940000162263	ENSGT00390000008314	ENSGT00390000014875	ENSGT00390000008957	ENSGT00940000159861	ENSGT00390000014091	ENSGT00950000182846.b.q	ENSGT01020000230401.b.b	ENSGT00940000155364	ENSGT00940000155577	ENSGT00940000160378.m.b #17	ENSGT00940000157834	ENSGT00390000015189	ENSGT00940000158383	ENSGT00390000012037	ENSGT00940000156606	ENSGT00940000159318	ENSGT00940000155280.a	ENSGT00390000003248.a.b.a.a	ENSGT00940000160872	ENSGT00390000017673.a	ENSGT00940000157696	ENSGT00940000162979	ENSGT00390000008825.a	ENSGT00390000009925.a	ENSGT00390000016224.j.b
Hybrid Bos Indicus	MODERN SPECIES	17	TIGD7 (ENSBIXG00005000310)	ENSBIXG00005008891	ENSBIXG00005008898	ENSBIXG00005008913	OR2C1 (ENSBIXG00005008925)	ZNF174 (ENSBIXG00005008946)	NAA60 (ENSBIXG00005005361)	C16orf90 (ENSBIXG00005009000)	CLUAP1 (ENSBIXG00005009052)	NLRC3 (ENSBIXG00005009110)	SLX4 (ENSBIXG00005009139)	DNASE1 (ENSBIXG00005009163)	TRAP1 (ENSBIXG00005009207)	CREBBP (ENSBIXG00005009249)	ADCY9 (ENSBIXG00005009274)	ENSBIXG00005006407 #17	SRL (ENSBIXG00005006408)	TFAP4 (ENSBIXG00005000476)	GLIS2 (ENSBIXG00005009329)	ENSBIXG00005009361	VASN (ENSBIXG00005009372)	CORO7 (ENSBIXG00005000496)	ENSBIXG00005009493	NMRAL1 (ENSBIXG00005009546)	HMOX2 (ENSBIXG00005009623)	CDIP1 (ENSBIXG00005009692)	C16orf96 (ENSBIXG00005009767)	UBALD1 (ENSBIXG00005009790)	MGRN1 (ENSBIXG00005009916)	NUDT16L1 (ENSBIXG00005009954)	ANKS3 (ENSBIXG00005000759)
American bison	MODERN SPECIES	3067	ENSBBBG00000005935	ENSBBBG00000022324	ENSBBBG00000022295	ENSBBBG00000022271	OR2C1 (ENSBBBG00000022259)	ZNF174 (ENSBBBG00000022247)	NAA60 (ENSBBBG00000022222)	C16orf90 (ENSBBBG00000022172)	CLUAP1 (ENSBBBG00000022163)	NLRC3 (ENSBBBG00000005832)	SLX4 (ENSBBBG00000022059)	DNASE1 (ENSBBBG00000021981)	TRAP1 (ENSBBBG00000021954)	CREBBP (ENSBBBG00000021866)	ADCY9 (ENSBBBG00000021730)	ENSBBBG00000021713 #17	SRL (ENSBBBG00000021705)	TFAP4 (ENSBBBG00000021691)	GLIS2 (ENSBBBG00000021638)	PAM16 (ENSBBBG00000021616)	CORO7 (ENSBBBG00000021609)	ENSBBBG00000005736	ENSBBBG00000021513	NMRAL1 (ENSBBBG00000021504)	HMOX2 (ENSBBBG00000021467)	ENSBBBG00000021415	UBALD1 (ENSBBBG00000021360)	MGRN1 (ENSBBBG00000005698)	NUDT16L1 (ENSBBBG00000005679)	ANKS3 (ENSBBBG00000021213)	ENSBBBG00000005662
Pecora	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Percora_a	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Bovidae	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Bos	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Wild yak	MODERN SPECIES	331	LRFN1 (ENSBMUG00000014960)	ENSBMUG00000014971	GMFG (ENSBMUG00000015036)	SAMD4B (ENSBMUG00000015091)	PAF1 (ENSBMUG00000015122)	MED29 (ENSBMUG00000015140)	ZFP36 (ENSBMUG00000015152)	PLEKHG2 (ENSBMUG00000015178)	ENSBMUG00000015236	ENSBMUG00000015253	SUPT5H (ENSBMUG00000015326)	TIMM50 (ENSBMUG00000015398)	DLL3 (ENSBMUG00000015428)	EID2 (ENSBMUG00000015450)	ENSBMUG00000015465	ENSBMUG00000015486 #17	ENSBMUG00000015530	FBL (ENSBMUG00000015541)	ENSBMUG00000015581	ENSBMUG00000015590	PSMC4 (ENSBMUG00000015610)	ENSBMUG00000015620	ENSBMUG00000015632	ENSBMUG00000015645	MAP3K10 (ENSBMUG00000015672)
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000160378.n #17
Goat	MODERN SPECIES	9	SAMD4B (ENSCHIG00000026801)	ENSCHIG00000011700	MED29 (ENSCHIG00000022951)	ZFP36 (ENSCHIG00000023209)	PLEKHG2 (ENSCHIG00000017043)	RPS16 (ENSCHIG00000024160)	ENSCHIG00000005676	SUPT5H (ENSCHIG00000023821)	TIMM50 (ENSCHIG00000003131)	DLL3 (ENSCHIG00000009219)	ENSCHIG00000018741	ENSCHIG00000011678	EID2 (ENSCHIG00000007961)	LGALS16 (ENSCHIG00000024926)	LGALS15 (ENSCHIG00000020836)	ENSCHIG00000015792 #17	ENSCHIG00000020003	DYRK1B (ENSCHIG00000013926)	FBL (ENSCHIG00000021562)	ENSCHIG00000022668	ENSCHIG00000012448	PSMC4 (ENSCHIG00000016431)	ZNF546 (ENSCHIG00000011952)	ENSCHIG00000018631	MAP3K10 (ENSCHIG00000019302)	TTC9B (ENSCHIG00000007381)	AKT2 (ENSCHIG00000015049)	C19orf47 (ENSCHIG00000027186)	PLD3 (ENSCHIG00000024228)	HIPK4 (ENSCHIG00000017836)	PRX (ENSCHIG00000026808)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000014310.h	ENSGT00390000014835.d #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Ursidae	ANCESTRAL SPECIES	8	ENSGT00390000014310.h	ENSGT00390000014835.d #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.dc.b	ENSGT00940000155398.ec	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Ursus	ANCESTRAL SPECIES	61	ENSGT00390000014310.h	ENSGT00390000014835.d #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.dc.b	ENSGT00940000155398.ec	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
American black bear	MODERN SPECIES	4505												PRNP (ENSUAMG00000004918)	PRND (ENSUAMG00000004909)	HNRNPL (ENSUAMG00000004900) #19	ECH1 (ENSUAMG00000004894) #21	LGALS4 (ENSUAMG00000004891) #17	ENSUAMG00000004881
Polar bear	MODERN SPECIES	152	ENSUMAG00000019305	ENSUMAG00000019264	ENSUMAG00000019255 #8	ENSUMAG00000019251 #9	ACP7 (ENSUMAG00000019242) #10	ENSUMAG00000019238 #12	ENSUMAG00000019236	MRPS12 (ENSUMAG00000019235) #11	SARS2 (ENSUMAG00000019233) #13	CCER2 (ENSUMAG00000019229)	ENSUMAG00000019224	SIRT2 (ENSUMAG00000019203)	RINL (ENSUMAG00000019196)	ENSUMAG00000019193 #19	ECH1 (ENSUMAG00000019188) #21	LGALS4 (ENSUMAG00000019180) #17	ENSUMAG00000019178	ACTN4 (ENSUMAG00000019165) #18	EIF3K (ENSUMAG00000019154) #26	MAP4K1 (ENSUMAG00000019101) #28	RYR1 (ENSUMAG00000018786) #29	RASGRP4 (ENSUMAG00000018588) #31	ENSUMAG00000018568	ENSUMAG00000018561 #33	PSMD8 (ENSUMAG00000018535) #35	CATSPERG (ENSUMAG00000018413)	C19orf33 (ENSUMAG00000018394)	YIF1B (ENSUMAG00000018389)	SPINT2 (ENSUMAG00000018383)	ENSUMAG00000018378	DPF1 (ENSUMAG00000018355)
Giant Panda	MODERN SPECIES	3	ENSAMEG00000008634	ENSAMEG00000026595 #7	NCCRP1 (ENSAMEG00000031248) #8	ENSAMEG00000026840 #9	ENSAMEG00000025318 #9	ACP7 (ENSAMEG00000008693) #10	ENSAMEG00000026659 #12	FBXO17 (ENSAMEG00000008724) #13	MRPS12 (ENSAMEG00000008722) #11	CCER2 (ENSAMEG00000027867)	NFKBIB (ENSAMEG00000008781)	SIRT2 (ENSAMEG00000008795)	RINL (ENSAMEG00000008845)	HNRNPL (ENSAMEG00000008848) #19	ECH1 (ENSAMEG00000008891) #21	LGALS4 (ENSAMEG00000009859) #17	CAPN12 (ENSAMEG00000009926)	ACTN4 (ENSAMEG00000009969) #18	EIF3K (ENSAMEG00000010168) #26	MAP4K1 (ENSAMEG00000010182) #28	RYR1 (ENSAMEG00000010275) #29	RASGRP4 (ENSAMEG00000010305) #31	FAM98C (ENSAMEG00000010326) ##32	SPRED3 (ENSAMEG00000028206) #33	GGN (ENSAMEG00000024902)	PSMD8 (ENSAMEG00000010354) #35	CATSPERG (ENSAMEG00000010375)	KCNK6 (ENSAMEG00000023675)	YIF1B (ENSAMEG00000010447)	SPINT2 (ENSAMEG00000010488)	PPP1R14A (ENSAMEG00000010498)
Mustelinae	ANCESTRAL SPECIES	53	ENSGT00390000014310.h	ENSGT00390000014835.d #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
American mink	MODERN SPECIES	164	ENSNVIG00000010256	ENSNVIG00000010240	ENSNVIG00000010214	SYCN (ENSNVIG00000010199) #7	NCCRP1 (ENSNVIG00000010190) #8	ACP7 (ENSNVIG00000010160) #10	ENSNVIG00000010149 #12	FBXO17 (ENSNVIG00000010132)	ENSNVIG00000010122 #11	SYSM (ENSNVIG00000010060) #13	CCER2 (ENSNVIG00000010042)	NFKBIB (ENSNVIG00000010016)	SIRT2 (ENSNVIG00000009932)	RINL (ENSNVIG00000009886)	HNRNPL (ENSNVIG00000009862) #19	LGALS4 (ENSNVIG00000009829) #17	ENSNVIG00000009819	ENSNVIG00000009810	ENSNVIG00000009798	CAPN12 (ENSNVIG00000009722)	ACTN4 (ENSNVIG00000009607) #18	EIF3K (ENSNVIG00000009521) #26	MAP4K1 (ENSNVIG00000009416) #28	RYR1 (ENSNVIG00000009065) #29	RASGRP4 (ENSNVIG00000008898) #31	FAM98C (ENSNVIG00000008860) ##32	SPRED3 (ENSNVIG00000008808) #33	GGN (ENSNVIG00000008798)	PSMD8 (ENSNVIG00000008788) #35	CATSPERG (ENSNVIG00000008598)	KCNK6 (ENSNVIG00000008559)
Ferret	MODERN SPECIES	390	ENSMPUG00000017736	ENSMPUG00000017737	SYCN (ENSMPUG00000017742) #7	NCCRP1 (ENSMPUG00000017744) #8	PAK4 (ENSMPUG00000017745) #9	ACP7 (ENSMPUG00000017747) #10	FBXO27 (ENSMPUG00000017748) #12	FBXO17 (ENSMPUG00000017749)	MRPS12 (ENSMPUG00000017750) #11	SARS2 (ENSMPUG00000017751) #13	NFKBIB (ENSMPUG00000017752)	SIRT2 (ENSMPUG00000017753)	RINL (ENSMPUG00000017754)	HNRNPL (ENSMPUG00000017755) #19	ECH1 (ENSMPUG00000017765) #21	LGALS4 (ENSMPUG00000017766) #17	ENSMPUG00000017771	CAPN12 (ENSMPUG00000017774)	ACTN4 (ENSMPUG00000017792) #18	EIF3K (ENSMPUG00000017793) #26	MAP4K1 (ENSMPUG00000017795) #28	RYR1 (ENSMPUG00000017796) #29	RASGRP4 (ENSMPUG00000017826) #31	FAM98C (ENSMPUG00000017827) ##32	SPRED3 (ENSMPUG00000017828) #33	GGN (ENSMPUG00000017830)	PSMD8 (ENSMPUG00000017833) #35	CATSPERG (ENSMPUG00000017834)	ENSMPUG00000019045	KCNK6 (ENSMPUG00000017840)	YIF1B (ENSMPUG00000017842)
Canidae	ANCESTRAL SPECIES	5	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00700000104635	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Canis_lupus	ANCESTRAL SPECIES		ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Dingo	MODERN SPECIES	125	ENSCAFG00020016179	ENSCAFG00020016181	ENSCAFG00020016182	SYCN (ENSCAFG00020016193) #7	NCCRP1 (ENSCAFG00020016195) #8	PAK4 (ENSCAFG00020016214) #9	ACP7 (ENSCAFG00020016761) #10	FBXO27 (ENSCAFG00020016767) #12	FBXO17 (ENSCAFG00020016777)	MRPS12 (ENSCAFG00020016784) #11	SARS2 (ENSCAFG00020016808) #13	NFKBIB (ENSCAFG00020017296)	SIRT2 (ENSCAFG00020017308)	HNRNPL (ENSCAFG00020017321) #19	ECH1 (ENSCAFG00020017423) #21	LGALS4 (ENSCAFG00020017429) #17	ENSCAFG00020017435	ENSCAFG00020017440	CAPN12 (ENSCAFG00020017453)	ACTN4 (ENSCAFG00020017486) #18	EIF3K (ENSCAFG00020017497) #26	MAP4K1 (ENSCAFG00020017544) #28	RYR1 (ENSCAFG00020017629) #29	RASGRP4 (ENSCAFG00020017737) #31	FAM98C (ENSCAFG00020017778) ##32	SPRED3 (ENSCAFG00020017782) #33	GGN (ENSCAFG00020017790)	PSMD8 (ENSCAFG00020017792) #35	CATSPERG (ENSCAFG00020017811)	KCNK6 (ENSCAFG00020017835)	YIF1B (ENSCAFG00020017839)
Dog	MODERN SPECIES		ENSCAFG00845004745	SYCN (ENSCAFG00845004747) #7	NCCRP1 (ENSCAFG00845004753) #8	PAK4 (ENSCAFG00845004765) #9	ACP7 (ENSCAFG00845004787) #10	FBXO27 (ENSCAFG00845004805) #12	FBXO17 (ENSCAFG00845004820)	MRPS12 (ENSCAFG00845004833) #11	SARS2 (ENSCAFG00845004848) #13	CCER2 (ENSCAFG00845004864)	NFKBIB (ENSCAFG00845004879)	SIRT2 (ENSCAFG00845004895)	RINL (ENSCAFG00845004909)	HNRNPL (ENSCAFG00845004919) #19	MAP4K1 (ENSCAFG00845004960) #28	LGALS4 (ENSCAFG00845005012) #17	ACTN4 (ENSCAFG00845005045) #18	CAPN12 (ENSCAFG00845005105)	EIF3K (ENSCAFG00845005159) #26	RYR1 (ENSCAFG00845005309) #29	RASGRP4 (ENSCAFG00845005540) #31	SPRED3 (ENSCAFG00845005619) #33	GGN (ENSCAFG00845005642)	PSMD8 (ENSCAFG00845005660) #35	CATSPERG (ENSCAFG00845005715)	KCNK6 (ENSCAFG00845005838)	YIF1B (ENSCAFG00845005907)	ENSCAFG00845006027	SPINT2 (ENSCAFG00845006068)	PPP1R14A (ENSCAFG00845006125)	DPF1 (ENSCAFG00845006207)
Red fox	MODERN SPECIES	80	ENSVVUG00000006333	SYCN (ENSVVUG00000006358) #7	NCCRP1 (ENSVVUG00000006361) #8	PAK4 (ENSVVUG00000006373) #9	ACP7 (ENSVVUG00000006416) #10	FBXO27 (ENSVVUG00000006418) #12	FBXO17 (ENSVVUG00000006422)	MRPS12 (ENSVVUG00000006433) #11	SARS2 (ENSVVUG00000006437) #13	CCER2 (ENSVVUG00000006442)	NFKBIB (ENSVVUG00000006448)	SIRT2 (ENSVVUG00000006453)	ENSVVUG00000006460	HNRNPL (ENSVVUG00000006478) #19	ECH1 (ENSVVUG00000006992) #21	LGALS4 (ENSVVUG00000006993) #17	CAPN12 (ENSVVUG00000007011)	ACTN4 (ENSVVUG00000007067) #18	ENSVVUG00000007093 #26	MAP4K1 (ENSVVUG00000007156) #28	RYR1 (ENSVVUG00000008192) #29	RASGRP4 (ENSVVUG00000012654) #31	ENSVVUG00000013061 ##32	PSMD8 (ENSVVUG00000013069) #35	GGN (ENSVVUG00000013074)	CATSPERG (ENSVVUG00000013084)	ENSVVUG00000013147	YIF1B (ENSVVUG00000013159)	ENSVVUG00000013178	ENSVVUG00000013189	DPF1 (ENSVVUG00000013209)
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Panthera	ANCESTRAL SPECIES	10	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.m #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000163639
lion	MODERN SPECIES	15	ENSPLOG00000010661	SYCN (ENSPLOG00000010703) #7	NCCRP1 (ENSPLOG00000010738) #8	PAK4 (ENSPLOG00000010814) #9	ENSPLOG00000010976 #10	ENSPLOG00000011055 #12	ENSPLOG00000011143	MRPS12 (ENSPLOG00000011184) #11	SARS2 (ENSPLOG00000011246) #13	CCER2 (ENSPLOG00000011565)	NFKBIB (ENSPLOG00000011626)	SIRT2 (ENSPLOG00000011758)	RINL (ENSPLOG00000011844)	HNRNPL (ENSPLOG00000011986) #19	ECH1 (ENSPLOG00000012195) #21	LGALS4 (ENSPLOG00000012236) #17	ENSPLOG00000005412	ENSPLOG00000005448	CAPN12 (ENSPLOG00000005550)	ACTN4 (ENSPLOG00000005666) #18	EIF3K (ENSPLOG00000005842) #26	MAP4K1 (ENSPLOG00000005960) #28	RYR1 (ENSPLOG00000006298) #29	RASGRP4 (ENSPLOG00000007326) #31	FAM98C (ENSPLOG00000008416) ##32	SPRED3 (ENSPLOG00000008525) #33	GGN (ENSPLOG00000008584)	PSMD8 (ENSPLOG00000008614) #35	CATSPERG (ENSPLOG00000008732)	KCNK6 (ENSPLOG00000009072)	YIF1B (ENSPLOG00000009148)
leopard	MODERN SPECIES	143	ENSPPRG00000007720	SYCN (ENSPPRG00000007972) #7	NCCRP1 (ENSPPRG00000008083) #8	PAK4 (ENSPPRG00000009412) #9	ACP7 (ENSPPRG00000009552) #10	FBXO27 (ENSPPRG00000010957) #12	FBXO17 (ENSPPRG00000011526)	MRPS12 (ENSPPRG00000011742) #11	SARS2 (ENSPPRG00000019182) #13	CCER2 (ENSPPRG00000020030)	NFKBIB (ENSPPRG00000024658)	SIRT2 (ENSPPRG00000024291)	RINL (ENSPPRG00000024023)	HNRNPL (ENSPPRG00000023692) #19	ECH1 (ENSPPRG00000023146) #21	LGALS4 (ENSPPRG00000023049) #17	ENSPPRG00000022813	CAPN12 (ENSPPRG00000000618)	ACTN4 (ENSPPRG00000001841) #18	EIF3K (ENSPPRG00000003674) #26	MAP4K1 (ENSPPRG00000005868) #28	RYR1 (ENSPPRG00000000710) #29	RASGRP4 (ENSPPRG00000009746) #31	FAM98C (ENSPPRG00000010257) ##32	SPRED3 (ENSPPRG00000010854) #33	GGN (ENSPPRG00000011111)	PSMD8 (ENSPPRG00000011200) #35	CATSPERG (ENSPPRG00000013150)	KCNK6 (ENSPPRG00000013354)	YIF1B (ENSPPRG00000014863)	SPINT2 (ENSPPRG00000016040)
Tiger	MODERN SPECIES	547	ENSPTIG00000009411	ENSPTIG00000009289	NCCRP1 (ENSPTIG00000009208) #8	ENSPTIG00000009100 #9	ACP7 (ENSPTIG00000008934) #10	FBXO27 (ENSPTIG00000008678) #12	ENSPTIG00000008582	MRPS12 (ENSPTIG00000008427) #11	SARS2 (ENSPTIG00000007979) #13	CCER2 (ENSPTIG00000007620)	NFKBIB (ENSPTIG00000007510)	SIRT2 (ENSPTIG00000007225)	RINL (ENSPTIG00000006908)	HNRNPL (ENSPTIG00000006436) #19	ECH1 (ENSPTIG00000006317) #21	LGALS4 (ENSPTIG00000006090) #17	ENSPTIG00000005513	ACTN4 (ENSPTIG00000003932) #18	EIF3K (ENSPTIG00000021217) #26	MAP4K1 (ENSPTIG00000020707) #28	RYR1 (ENSPTIG00000018706) #29	RASGRP4 (ENSPTIG00000016529) #31	ENSPTIG00000015909 ##32	PSMD8 (ENSPTIG00000015437) #35	CATSPERG (ENSPTIG00000015028)	ENSPTIG00000014709	YIF1B (ENSPTIG00000014572)	C19orf33 (ENSPTIG00000014397)	SPINT2 (ENSPTIG00000014109)	ENSPTIG00000013647	DPF1 (ENSPTIG00000012923)
Cat	MODERN SPECIES	246	SYCN (ENSFCAG00000042995) #7	NCCRP1 (ENSFCAG00000007425) #8	PAK4 (ENSFCAG00000029229) #9	ACP7 (ENSFCAG00000003175) #10	ENSFCAG00000030831 #12	FBXO17 (ENSFCAG00000027779)	MRPS12 (ENSFCAG00000014573) #11	SARS2 (ENSFCAG00000003187) #13	ENSFCAG00000040425	NFKBIB (ENSFCAG00000003186)	ACTN4 (ENSFCAG00000029959) #18	SIRT2 (ENSFCAG00000003185)	RINL (ENSFCAG00000003184)	HNRNPL (ENSFCAG00000003183) #19	ECH1 (ENSFCAG00000003182) #21	LGALS4 (ENSFCAG00000003181) #17	ENSFCAG00000043117	CAPN12 (ENSFCAG00000000833)	EIF3K (ENSFCAG00000021901) #26	MAP4K1 (ENSFCAG00000000829) #28	RYR1 (ENSFCAG00000000828) #29	RASGRP4 (ENSFCAG00000000827) #31	FAM98C (ENSFCAG00000000826) ##32	SPRED3 (ENSFCAG00000000825) #33	GGN (ENSFCAG00000042808)	PSMD8 (ENSFCAG00000000823) #35	KCNK6 (ENSFCAG00000040857)	ENSFCAG00000049858	YIF1B (ENSFCAG00000014834)	C19orf33 (ENSFCAG00000038406)	SPINT2 (ENSFCAG00000026071)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00390000014310.g.d	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Equus	ANCESTRAL SPECIES	1	ENSGT01050000245193	ENSGT00390000014310.h.w	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398.wb	ENSGT00940000155398.vb	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b
Donkey	MODERN SPECIES	18	ENSEASG00005032197	ENSEASG00005012816	NCCRP1 (ENSEASG00005019745) #8	PAK4 (ENSEASG00005019744) #9	ACP7 (ENSEASG00005019741) #10	FBXO27 (ENSEASG00005029947) #12	FBXO17 (ENSEASG00005019738)	MRPS12 (ENSEASG00005033585) #11	SARS2 (ENSEASG00005019719) #13	CCER2 (ENSEASG00005024399)	NFKBIB (ENSEASG00005019706)	SIRT2 (ENSEASG00005019549)	RINL (ENSEASG00005019521)	HNRNPL (ENSEASG00005019462) #19	ECH1 (ENSEASG00005019442) #21	LGALS4 (ENSEASG00005038564) #17	ENSEASG00005019437	ENSEASG00005026607	CAPN12 (ENSEASG00005019426)	ACTN4 (ENSEASG00005013002) #18	EIF3K (ENSEASG00005012475) #26	MAP4K1 (ENSEASG00005011282) #28	RYR1 (ENSEASG00005004007) #29	RASGRP4 (ENSEASG00005002609) #31	FAM98C (ENSEASG00005033042) ##32	SPRED3 (ENSEASG00005026357) #33	GGN (ENSEASG00005002568)	PSMD8 (ENSEASG00005002565) #35	CATSPERG (ENSEASG00005002534)	KCNK6 (ENSEASG00005035509)	YIF1B (ENSEASG00005002503)
Horse	MODERN SPECIES	1	ENSECAG00000043240	ENSECAG00000000277	NCCRP1 (ENSECAG00000018954) #8	PAK4 (ENSECAG00000017421) #9	ACP7 (ENSECAG00000014105) #10	FBXO27 (ENSECAG00000013830) #12	FBXO17 (ENSECAG00000013806)	MRPS12 (ENSECAG00000013794) #11	SARS2 (ENSECAG00000019654) #13	CCER2 (ENSECAG00000043131)	NFKBIB (ENSECAG00000014345)	SIRT2 (ENSECAG00000023223)	RINL (ENSECAG00000020743)	HNRNPL (ENSECAG00000012677) #19	ECH1 (ENSECAG00000024945) #21	LGALS4 (ENSECAG00000021683) #17	ENSECAG00000021214	ENSECAG00000017748	CAPN12 (ENSECAG00000017728)	ACTN4 (ENSECAG00000021777) #18	EIF3K (ENSECAG00000012822) #26	MAP4K1 (ENSECAG00000017061) #28	RYR1 (ENSECAG00000015344) #29	RASGRP4 (ENSECAG00000021876) #31	FAM98C (ENSECAG00000021399) ##32	SPRED3 (ENSECAG00000033332) #33	GGN (ENSECAG00000038928)	PSMD8 (ENSECAG00000052243) #35	CATSPERG (ENSECAG00000000225)	KCNK6 (ENSECAG00000023395)	YIF1B (ENSECAG00000015409)
Chiroptera	ANCESTRAL SPECIES	16	ENSGT01050000245012	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT01050000245012	ENSGT00390000014310.h	ENSGT00390000014835 #7	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Microbat	MODERN SPECIES	1122	ENSMLUG00000026080	ENSMLUG00000002170 #7	ENSMLUG00000002162 #8	ENSMLUG00000024346 #7	ENSMLUG00000026590 #8	PAK4 (ENSMLUG00000002160) #9	ACP7 (ENSMLUG00000002150) #10	FBXO17 (ENSMLUG00000001018)	MRPS12 (ENSMLUG00000006076) #11	SARS2 (ENSMLUG00000000998) #13	NFKBIB (ENSMLUG00000000995)	SIRT2 (ENSMLUG00000000986)	RINL (ENSMLUG00000000980)	HNRNPL (ENSMLUG00000000961) #19	ECH1 (ENSMLUG00000000951) #21	LGALS4 (ENSMLUG00000000944) #17	ENSMLUG00000022715	ENSMLUG00000029721	CAPN12 (ENSMLUG00000002305)	ACTN4 (ENSMLUG00000002293) #18	EIF3K (ENSMLUG00000010217) #26	MAP4K1 (ENSMLUG00000010151) #28	RYR1 (ENSMLUG00000009950) #29	RASGRP4 (ENSMLUG00000009914) #31	ENSMLUG00000024742 #33	PSMD8 (ENSMLUG00000009902) #35	CATSPERG (ENSMLUG00000002008)	KCNK6 (ENSMLUG00000002003)	YIF1B (ENSMLUG00000000774)	SPINT2 (ENSMLUG00000001998)	PPP1R14A (ENSMLUG00000027923)
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010021826	ENSRFEG00010021819	SYCN (ENSRFEG00010021816) #7	NCCRP1 (ENSRFEG00010021812) #8	PAK4 (ENSRFEG00010021805) #9	ACP7 (ENSRFEG00010021796) #10	FBXO17 (ENSRFEG00010021790)	MRPS12 (ENSRFEG00010021787) #11	SARS2 (ENSRFEG00010021774) #13	CCER2 (ENSRFEG00010021765)	NFKBIB (ENSRFEG00010021757)	SIRT2 (ENSRFEG00010021731)	RINL (ENSRFEG00010021718)	HNRNPL (ENSRFEG00010021703) #19	ECH1 (ENSRFEG00010021693) #21	LGALS4 (ENSRFEG00010021673) #17	ENSRFEG00010021662	ENSRFEG00010021645	ENSRFEG00010021641	CAPN12 (ENSRFEG00010021619)	ACTN4 (ENSRFEG00010021514) #18	EIF3K (ENSRFEG00010021447) #26	MAP4K1 (ENSRFEG00010021396) #28	RYR1 (ENSRFEG00010008376) #29	RASGRP4 (ENSRFEG00010007956) #31	FAM98C (ENSRFEG00010007774) ##32	SPRED3 (ENSRFEG00010007655) #33	GGN (ENSRFEG00010007610)	PSMD8 (ENSRFEG00010007523) #35	CATSPERG (ENSRFEG00010007058)	KCNK6 (ENSRFEG00010006997)
Megabat	MODERN SPECIES	2286														HNRNPL (ENSPVAG00000015415) #19	ECH1 (ENSPVAG00000015412) #21	LGALS4 (ENSPVAG00000015411) #17
Atlantogenata	ANCESTRAL SPECIES	31	ENSGT00390000014310.h	ENSGT00390000014310.g	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00670000099437	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000155398	ENSGT00940000161901	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.a.l ##32	ENSGT00940000161445 #33	ENSGT00700000104635	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000160509	ENSGT00390000009423.b	ENSGT00940000160348
Afrotheria	ANCESTRAL SPECIES	77	ENSGT00390000008920.c.b	ENSGT00940000160922	ENSGT00390000014310.h	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17
Tenrec	MODERN SPECIES	5456															SIRT2 (ENSETEG00000006258)	LGALS4 (ENSETEG00000006256) #17
Afrotheria_a	ANCESTRAL SPECIES	76	ENSGT00390000008920.c.b	ENSGT00940000160922	ENSGT00390000014310.h	ENSGT00940000161313 #8	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00940000162455	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17
Elephant	MODERN SPECIES	635	KCNK6 (ENSLAFG00000028751)	ENSLAFG00000004605	PSMD8 (ENSLAFG00000004611) #35	GGN (ENSLAFG00000004614)	SPRED3 (ENSLAFG00000028517) #33	FAM98C (ENSLAFG00000020798) ##32	RASGRP4 (ENSLAFG00000005444) #31	RYR1 (ENSLAFG00000032372) #29	MAP4K1 (ENSLAFG00000004251) #28	EIF3K (ENSLAFG00000029093) #26	ACTN4 (ENSLAFG00000006521) #18	ENSLAFG00000029281	ENSLAFG00000011761	ENSLAFG00000029112 #21	ENSLAFG00000018569 #21	ENSLAFG00000032124 #17	ENSLAFG00000029243 #21	HNRNPL (ENSLAFG00000025536) #19	RINL (ENSLAFG00000004490)	SIRT2 (ENSLAFG00000021425)	NFKBIB (ENSLAFG00000018591)	ENSLAFG00000031116 #13	ENSLAFG00000030519 #13	MRPS12 (ENSLAFG00000022140) #11	ENSLAFG00000026464	ENSLAFG00000030761 #12	ENSLAFG00000014711 #12	ACP7 (ENSLAFG00000012332) #10	PAK4 (ENSLAFG00000005252) #9	NCCRP1 (ENSLAFG00000026532) #8	ENSLAFG00000022242
Sauria	ANCESTRAL SPECIES	34	ENSGT01100000263537.b.b.c.a.a	ENSGT00940000153887.B	ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Archelosauria	ANCESTRAL SPECIES	33	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Archosauria	ANCESTRAL SPECIES	42	ENSGT01040000240503.C	ENSGT00440000037640	ENSGT00940000164885	ENSGT00390000007540	ENSGT00390000001474	ENSGT00940000159702	ENSGT00940000160922	ENSGT00390000014835 #7	ENSGT00940000159792.C #9	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330	ENSGT00940000159112.b	ENSGT00940000159256	ENSGT00390000017267	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000161069
Aves	ANCESTRAL SPECIES	44	ENSGT01040000240503.C	ENSGT00440000037640	ENSGT00940000164885	ENSGT00390000007540	ENSGT00390000001474	ENSGT00940000159702	ENSGT00940000160922	ENSGT00390000014835 #7	ENSGT00940000159792.C #9	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330	ENSGT00940000159112.b	ENSGT00940000159256	ENSGT00390000017267	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000161069
Neognathae	ANCESTRAL SPECIES	39	ENSGT01040000240503.C.i	ENSGT00440000037640	ENSGT00940000164885	ENSGT00390000007540	ENSGT00390000001474	ENSGT00940000159702	ENSGT00940000160922	ENSGT00390000014835 #7	ENSGT00940000159792.C #9	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00390000014682 #35	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330	ENSGT00940000159112.b	ENSGT00940000159256	ENSGT00390000017267	ENSGT01090000260005.a.b.a.b.b	ENSGT00940000161069	ENSGT00940000160500
Neognathae_b	ANCESTRAL SPECIES	43		ENSGT01040000240503.C.i	ENSGT00440000037640	ENSGT00940000164885	ENSGT00390000001474	ENSGT00940000159702	ENSGT00940000160922	ENSGT00390000014835 #7	ENSGT00940000159792.C #9	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159555	ENSGT01030000234613.b.b	ENSGT00940000160358	ENSGT00940000160599	ENSGT00940000156765	ENSGT00390000009795	ENSGT00530000064222.a	ENSGT00390000003107.b.h
Passeriformes	ANCESTRAL SPECIES	68																ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267	ENSGT00940000159256	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00390000002548	ENSGT00940000158344.b #37	ENSGT00390000014682 #35
Passeriformes_d	ANCESTRAL SPECIES	65																ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267	ENSGT00940000159256	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00390000002548	ENSGT00940000158344.b #37	ENSGT00390000014682 #35
Passeriformes_g	ANCESTRAL SPECIES	58																ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT01100000263504.a.b.a.a	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267	ENSGT00940000159256	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00390000002548	ENSGT00940000158344.b #37	ENSGT00390000014682 #35	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000159555	ENSGT01030000234613.b.b
Passeroidea	ANCESTRAL SPECIES	60																ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT01090000260005.a.b.a.b.b	ENSGT00390000017267	ENSGT00940000159256	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00390000002548	ENSGT00940000158344.b #37	ENSGT00390000014682 #35	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000159555	ENSGT01030000234613.b.b	ENSGT00940000160358
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	90	ENSTGUG00000026946	ENSTGUG00000028622 #21	ENSTGUG00000028656 #19	ENSTGUG00000026943 #19	ENSTGUG00000029586	ENSTGUG00000023185 #37	ENSTGUG00000026521	ENSTGUG00000028463	ENSTGUG00000025277	ENSTGUG00000026509	EHD2 (ENSTGUG00000024660)	NOP53 (ENSTGUG00000018833)	ENSTGUG00000029304	ENSTGUG00000026183	ENSTGUG00000023522	ENSTGUG00000022039 #17	ENSTGUG00000029363 #18	ENSTGUG00000024158 #29	EIF3K (ENSTGUG00000021289) #26	ENSTGUG00000029474 #18	ENSTGUG00000026538 #17	ENSTGUG00000020906	ENSTGUG00000021795	ENSTGUG00000027973 #21	ENSTGUG00000021988	ENSTGUG00000021829	ENSTGUG00000019027	ENSTGUG00000022424	ENSTGUG00000019023	ENSTGUG00000028954	ENSTGUG00000028171 #37
Zebra finch	MODERN SPECIES	90	ENSTGUG00000023141	ENSTGUG00000022044	ENSTGUG00000022571 #19	ENSTGUG00000020962 ##19	ENSTGUG00000018913 #35	ENSTGUG00000028171 #37	ENSTGUG00000028954	ENSTGUG00000019023	ENSTGUG00000022424	ENSTGUG00000019027	ENSTGUG00000021829	ENSTGUG00000021988	ENSTGUG00000027973 #21	ENSTGUG00000021795	ENSTGUG00000020906	ENSTGUG00000026538 #17	ENSTGUG00000029474 #18	EIF3K (ENSTGUG00000021289) #26	ENSTGUG00000024158 #29	ENSTGUG00000029363 #18	ENSTGUG00000022039 #17	ENSTGUG00000023522	ENSTGUG00000026183	ENSTGUG00000029304	NOP53 (ENSTGUG00000018833)	EHD2 (ENSTGUG00000024660)	ENSTGUG00000026509	ENSTGUG00000025277	ENSTGUG00000028463	ENSTGUG00000026521	ENSTGUG00000023185 #37
Neognathae_c	ANCESTRAL SPECIES	45							ENSGT00940000160922	ENSGT00390000014835 #7	ENSGT00940000159792.C #9	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159555	ENSGT01030000234613.b.b	ENSGT00940000160358	ENSGT00940000160599	ENSGT00940000156765	ENSGT00390000009795	ENSGT00530000064222.a	ENSGT00390000003107.b.h	ENSGT00940000157189	ENSGT00390000005773	ENSGT00950000183059.b.b	ENSGT00940000161512
Golden eagle	MODERN SPECIES	54								SYCN (ENSACCG00020015275) #7	PAK4 (ENSACCG00020015248) #9	ENSACCG00020015225 #11	SARS2 (ENSACCG00020015164) #13	ENSACCG00020015117	ENSACCG00020015091	HNRNPL (ENSACCG00020015059) #19	ECH1 (ENSACCG00020015028) #21	LGALS4 (ENSACCG00020015000) #17	ENSACCG00020014966 #28	EIF3K (ENSACCG00020014943) #26	ACTN4 (ENSACCG00020014854) #18	ENSACCG00020014705	ENSACCG00020014687	ENSACCG00020014648 #11
Cryptodira	ANCESTRAL SPECIES	35	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841 #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Testudinoidea	DUPLICATION
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	30	ENSGT00390000015485 #10	ENSGT00940000161841.c #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.r #17	ENSGT00940000160378.q.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057.f #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Testudinidae	ANCESTRAL SPECIES	36	ENSGT00390000015485 #10	ENSGT00940000161841.c #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.r #17	ENSGT00940000160378.q.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b.b #32	ENSGT00440000037341.b.b.a #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057.f #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a
Abingdon island giant tortoise	MODERN SPECIES	464	ENSCABG00000008189 #12	ENSCABG00000008190 #12	MRPS12 (ENSCABG00000008191) #11	SARS2 (ENSCABG00000008192) #13	ENSCABG00000008195	ENSCABG00000008197 #14	ENSCABG00000008199	NFKBIB (ENSCABG00000008200)	SIRT2 (ENSCABG00000008204)	ENSCABG00000008205	ENSCABG00000008211	ENSCABG00000008358	HNRNPL (ENSCABG00000008359) #19	ECH1 (ENSCABG00000008360) #21	LGALS4 (ENSCABG00000008361) #17	ENSCABG00000008362 #17	ACTN4 (ENSCABG00000008363) #18	ENSCABG00000008364 #26	ENSCABG00000008365 #28	ENSCABG00000008366 #29
Goode s thornscrub tortoise	MODERN SPECIES	134	PAK4 (ENSGEVG00005017326) #9	ACP7 (ENSGEVG00005017292) #10	FBXO27 (ENSGEVG00005017270) #12	MRPS12 (ENSGEVG00005017256) #11	SARS2 (ENSGEVG00005017213) #13	ENSGEVG00005017174 #14	ENSGEVG00005017156	NFKBIB (ENSGEVG00005017133)	SIRT2 (ENSGEVG00005017105)	ENSGEVG00005017076	ENSGEVG00005016929	ENSGEVG00005016887	HNRNPL (ENSGEVG00005016861) #19	ECH1 (ENSGEVG00005016832) #21	LGALS4 (ENSGEVG00005016776) #17	ENSGEVG00005016741 #17	ACTN4 (ENSGEVG00005016669) #18	EIF3K (ENSGEVG00005016641) #26	ENSGEVG00005016631	ENSGEVG00005016594	RYR1 (ENSGEVG00005016095) ##29	RASGRP4 (ENSGEVG00005015869) #31	ENSGEVG00005015784 #32	SPRED3 (ENSGEVG00005015743) #33	ENSGEVG00005015710	PSMD8 (ENSGEVG00005015680) #35	ENSGEVG00005015651	CATSPERG (ENSGEVG00005015530)	MEIS3 (ENSGEVG00005015459) #36	SLC8A2 (ENSGEVG00005015381) #37	KPTN (ENSGEVG00005015356)
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000160378.q.a #17
painted turtle	MODERN SPECIES	840	ENSCPBG00000018922	HNRNPL (ENSCPBG00000018919) #19	ECH1 (ENSCPBG00000018915) #21	ENSCPBG00000018913	TIMM50 (ENSCPBG00000018911)	SUPT5H (ENSCPBG00000018792)	ENSCPBG00000018764	ENSCPBG00000018758	ENSCPBG00000018757	ENSCPBG00000018754	ZFP36 (ENSCPBG00000018753)	ENSCPBG00000018747	ENSCPBG00000018745	ENSCPBG00000018741	LGALS4 (ENSCPBG00000018739) #17	ENSCPBG00000018737 #17	ENSCPBG00000018734	ENSCPBG00000018733 #17	ENSCPBG00000018731	ACTN4 (ENSCPBG00000018719) #18
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000160378.q.b #17
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000160378.q.b #17
painted turtle	MODERN SPECIES	840														ACTN4 (ENSCPBG00000018719) #18	ENSCPBG00000018731	ENSCPBG00000018733 #17	ENSCPBG00000018734	ENSCPBG00000018737 #17	LGALS4 (ENSCPBG00000018739) #17	ENSCPBG00000018741	ENSCPBG00000018745	ENSCPBG00000018747	ZFP36 (ENSCPBG00000018753)	ENSCPBG00000018754	ENSCPBG00000018757	ENSCPBG00000018758	ENSCPBG00000018764	SUPT5H (ENSCPBG00000018792)	TIMM50 (ENSCPBG00000018911)	ENSCPBG00000018913	ECH1 (ENSCPBG00000018915) #21
Testudinoidea	ANCESTRAL SPECIES	30	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.c #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.r #17	ENSGT00940000160378.q.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057.f #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a
Testudinidae	ANCESTRAL SPECIES	36	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.c #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.r #17	ENSGT00940000160378.q.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b.b #32	ENSGT00440000037341.b.b.a #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057.f #36	ENSGT00940000158344.b #37	ENSGT00390000002548
Abingdon island giant tortoise	MODERN SPECIES	464	ACP7 (ENSCABG00000008186) #10	ENSCABG00000008189 #12	ENSCABG00000008190 #12	MRPS12 (ENSCABG00000008191) #11	SARS2 (ENSCABG00000008192) #13	ENSCABG00000008195	ENSCABG00000008197 #14	ENSCABG00000008199	NFKBIB (ENSCABG00000008200)	SIRT2 (ENSCABG00000008204)	ENSCABG00000008205	ENSCABG00000008211	ENSCABG00000008358	HNRNPL (ENSCABG00000008359) #19	ECH1 (ENSCABG00000008360) #21	LGALS4 (ENSCABG00000008361) #17	ENSCABG00000008362 #17	ACTN4 (ENSCABG00000008363) #18	ENSCABG00000008364 #26	ENSCABG00000008365 #28	ENSCABG00000008366 #29
Goode s thornscrub tortoise	MODERN SPECIES	134	NCCRP1 (ENSGEVG00005017353) #8	PAK4 (ENSGEVG00005017326) #9	ACP7 (ENSGEVG00005017292) #10	FBXO27 (ENSGEVG00005017270) #12	MRPS12 (ENSGEVG00005017256) #11	SARS2 (ENSGEVG00005017213) #13	ENSGEVG00005017174 #14	ENSGEVG00005017156	NFKBIB (ENSGEVG00005017133)	SIRT2 (ENSGEVG00005017105)	ENSGEVG00005017076	ENSGEVG00005016929	ENSGEVG00005016887	HNRNPL (ENSGEVG00005016861) #19	ECH1 (ENSGEVG00005016832) #21	LGALS4 (ENSGEVG00005016776) #17	ENSGEVG00005016741 #17	ACTN4 (ENSGEVG00005016669) #18	EIF3K (ENSGEVG00005016641) #26	ENSGEVG00005016631	ENSGEVG00005016594	RYR1 (ENSGEVG00005016095) ##29	RASGRP4 (ENSGEVG00005015869) #31	ENSGEVG00005015784 #32	SPRED3 (ENSGEVG00005015743) #33	ENSGEVG00005015710	PSMD8 (ENSGEVG00005015680) #35	ENSGEVG00005015651	CATSPERG (ENSGEVG00005015530)	MEIS3 (ENSGEVG00005015459) #36	SLC8A2 (ENSGEVG00005015381) #37
Emydidae	ANCESTRAL SPECIES	45	ENSGT00940000159792.C #9	ENSGT00390000015485 #10	ENSGT00940000161841.c #12	ENSGT00550000075103 #11	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00390000001278.a #14	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.r #17	ENSGT00940000159343 #18	ENSGT00940000159883 #31	ENSGT00440000037341.b.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057.f #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330	ENSGT00940000159112.b	ENSGT00940000161901
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	252	NCCRP1 (ENSTMTG00000005853) #8	PAK4 (ENSTMTG00000005826) #9	ENSTMTG00000005805 #8	MRPS12 (ENSTMTG00000005790) #11	ENSTMTG00000005780	ENSTMTG00000005761	ENSTMTG00000005742 #14	ENSTMTG00000005730	NFKBIB (ENSTMTG00000005722)	SIRT2 (ENSTMTG00000005655)	ENSTMTG00000005615	ENSTMTG00000005579	ENSTMTG00000005568	HNRNPL (ENSTMTG00000005412) #19	ECH1 (ENSTMTG00000005387) #21	ENSTMTG00000005159 #17	ACTN4 (ENSTMTG00000005102) #18	RASGRP4 (ENSTMTG00000004905) #31	ENSTMTG00000004865 #32	SPRED3 (ENSTMTG00000004543) #33	ENSTMTG00000004485	PSMD8 (ENSTMTG00000004454) #35	CATSPERG (ENSTMTG00000004257)	ENSTMTG00000004088 #36	SLC8A2 (ENSTMTG00000004021) #37	KPTN (ENSTMTG00000003997)	NAPA (ENSTMTG00000003917)	ENSTMTG00000003897	ZNF541 (ENSTMTG00000003768)	BICRA (ENSTMTG00000003713)	ENSTMTG00000003694
Three-toed box turtle	MODERN SPECIES	1953																ENSTMTG00000018629 #17
painted turtle	MODERN SPECIES	840	ENSCPBG00000018924	ENSCPBG00000018922	HNRNPL (ENSCPBG00000018919) #19	ECH1 (ENSCPBG00000018915) #21	ENSCPBG00000018913	TIMM50 (ENSCPBG00000018911)	SUPT5H (ENSCPBG00000018792)	ENSCPBG00000018764	ENSCPBG00000018758	ENSCPBG00000018757	ENSCPBG00000018754	ZFP36 (ENSCPBG00000018753)	ENSCPBG00000018747	ENSCPBG00000018745	ENSCPBG00000018741	LGALS4 (ENSCPBG00000018739) #17	ENSCPBG00000018737 #17	ENSCPBG00000018734	ENSCPBG00000018733 #17	ENSCPBG00000018731	ACTN4 (ENSCPBG00000018719) #18
Lepidosauria	ANCESTRAL SPECIES	39					ENSGT00530000064222.a	ENSGT00390000003107.b	ENSGT00940000153792.A #13	ENSGT00550000074807.c	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT01050000246816	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
tuatara	MODERN SPECIES	1028	SYMPK (ENSSPUG00000002789)	ENSSPUG00000002682	NOVA2 (ENSSPUG00000002591)	NANOS2 (ENSSPUG00000002566)	CCDC61 (ENSSPUG00000002553)	ENSSPUG00000002545	ENSSPUG00000002531	FBXO46 (ENSSPUG00000002528)	SARS2 (ENSSPUG00000002348) #13	ENSSPUG00000002304	NFKBIB (ENSSPUG00000002266)	ENSSPUG00000002224	ENSSPUG00000002211	ARF6 (ENSSPUG00000002206)	HNRNPL (ENSSPUG00000002177) #19	LGALS4 (ENSSPUG00000002038) #17
Episquamata	ANCESTRAL SPECIES	7	ENSGT00860000136302	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Laterata	ANCESTRAL SPECIES	17	ENSGT00860000136302	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT01030000235120	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Common wall lizard	MODERN SPECIES	16	FBXO46 (ENSPMRG00000012326)	ENSPMRG00000012318	ENSPMRG00000012296 #13	ENSPMRG00000012287	ENSPMRG00000012284	ENSPMRG00000012225 #13	ENSPMRG00000012216	NFKBIB (ENSPMRG00000012209)	SIRT2 (ENSPMRG00000012202)	ENSPMRG00000012199	ENSPMRG00000012196	ENSPMRG00000012190	ENSPMRG00000012186	HNRNPL (ENSPMRG00000012182) #19	ECH1 (ENSPMRG00000012178) #21	LGALS4 (ENSPMRG00000012171) #17	ACTN4 (ENSPMRG00000012127) #18	EIF3K (ENSPMRG00000012120) #26	MAP4K1 (ENSPMRG00000012108) #28	ENSPMRG00000012102	RYR1 (ENSPMRG00000010440) #29	RASGRP4 (ENSPMRG00000010019) #31	ENSPMRG00000010006 #32	SPRED3 (ENSPMRG00000009999) #33	PSMD8 (ENSPMRG00000009992) #35	ENSPMRG00000009984	ENSPMRG00000009975 #36	SLC8A2 (ENSPMRG00000009969) #37	KPTN (ENSPMRG00000009957)	NAPA (ENSPMRG00000009946)	ENSPMRG00000009933
Argentine black and white tegu	MODERN SPECIES	59	NOVA2 (ENSSMRG00000015264)	NANOS2 (ENSSMRG00000015261)	CCDC61 (ENSSMRG00000015259)	QPCTL (ENSSMRG00000015258)	FBXO46 (ENSSMRG00000015257)	ENSSMRG00000015255	SARS2 (ENSSMRG00000015252) #13	ENSSMRG00000015251	NFKBIB (ENSSMRG00000015249)	SIRT2 (ENSSMRG00000015247)	ENSSMRG00000015246	ENSSMRG00000015087	ENSSMRG00000015086	HNRNPL (ENSSMRG00000015085) #19	ECH1 (ENSSMRG00000015084) #21	LGALS4 (ENSSMRG00000015083) #17	ENSSMRG00000015082	ACTN4 (ENSSMRG00000015081) #18	EIF3K (ENSSMRG00000015080) #26	ENSSMRG00000015079 #28	RYR1 (ENSSMRG00000007722) #29	ENSSMRG00000007638 #30	RASGRP4 (ENSSMRG00000007635) #31	ENSSMRG00000007629 #32	SPRED3 (ENSSMRG00000007622) #33	ENSSMRG00000007620	PSMD8 (ENSSMRG00000007610) #35	ENSSMRG00000007593	ENSSMRG00000007233 #36	SLC8A2 (ENSSMRG00000007223) #37	KPTN (ENSSMRG00000007219)
Toxicofera	ANCESTRAL SPECIES	22	ENSGT00450000040421	ENSGT00860000136302	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378 #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308 #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445 #33	ENSGT00940000170834	ENSGT00390000014682 #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Lizard	MODERN SPECIES	1271													HNRNPL (ENSACAG00000009810) #19	ECH1 (ENSACAG00000009891) #21	ENSACAG00000034807	LGALS4 (ENSACAG00000009950) #17	ENSACAG00000010046 #18
Elapidae	DUPLICATION
Elapidae	DUPLICATION
Elapidae	DUPLICATION
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.a.a #17
Elapidae_a	DUPLICATION
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.a.a.a #17
Blue-lipped sea krait	MODERN SPECIES	5368										ENSLLTG00000004557	ENSLLTG00000004572	HNRNPL (ENSLLTG00000004578) #19	ECH1 (ENSLLTG00000004597) #21	ENSLLTG00000004611 #17	ENSLLTG00000004628 #17	ENSLLTG00000004653 #17
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.a.a.a #17
Eastern brown snake	MODERN SPECIES	77	MYPOP (ENSPTXG00000016806)	NOVA2 (ENSPTXG00000016809)	CCDC61 (ENSPTXG00000016815)	QPCTL (ENSPTXG00000016820)	FBXO46 (ENSPTXG00000017123)	ENSPTXG00000017124	SARS2 (ENSPTXG00000017130) #13	NFKBIB (ENSPTXG00000017236)	SIRT2 (ENSPTXG00000017240)	ENSPTXG00000017244	ENSPTXG00000017251	ENSPTXG00000017255	HNRNPL (ENSPTXG00000012356) #19	ECH1 (ENSPTXG00000012357) #21	ENSPTXG00000012361 #17	ENSPTXG00000012363 #17	ACTN4 (ENSPTXG00000012365) #18	EIF3K (ENSPTXG00000012439) #26	ENSPTXG00000012442 #28	RYR1 (ENSPTXG00000012560) #29	ENSPTXG00000019017 #30	RASGRP4 (ENSPTXG00000019018) #31	SPRED3 (ENSPTXG00000019020) #33	PSMD8 (ENSPTXG00000019025) #35	ENSPTXG00000019026	ENSPTXG00000019027	ENSPTXG00000019028 #36	SLC8A2 (ENSPTXG00000019029) #37	ENSPTXG00000019030	ENSPTXG00000019031	NAPA (ENSPTXG00000019032)
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.a.a.b #17
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.a.a.b #17
Eastern brown snake	MODERN SPECIES	1721																ENSPTXG00000012660 #17
Indian cobra	MODERN SPECIES	11	ENSNNAG00000018432	ENSNNAG00000018434	SHKBP1 (ENSNNAG00000018457)	LTBP4 (ENSNNAG00000018535)	KCNK6 (ENSNNAG00000018546)	YIF1B (ENSNNAG00000018555)	SPINT2 (ENSNNAG00000018577)	PPP1R14A (ENSNNAG00000018594)	ZC3H4 (ENSNNAG00000018598)	SAE1 (ENSNNAG00000018609)	CCDC9 (ENSNNAG00000018616)	ENSNNAG00000018622	DHX34 (ENSNNAG00000018625)	ENSNNAG00000018627	ENSNNAG00000018629 #17	ENSNNAG00000018631 #17	ENSNNAG00000018636 #17	ENSNNAG00000018639	NECTIN2 (ENSNNAG00000018643)	ENSNNAG00000018648	B3GNT8 (ENSNNAG00000018653)
Elapidae	ANCESTRAL SPECIES	9	ENSGT00860000136302	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445.cb #33	ENSGT00940000170834	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.d	ENSGT00390000005826.a.a
Elapidae_a	DUPLICATION
Elapidae_a	ANCESTRAL SPECIES	33	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b.b #17	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445.cb #33	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.d	ENSGT00390000002548.c	ENSGT00390000005826.a.a
Acanthophiinae	ANCESTRAL SPECIES	32	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b.b #17	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.c	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00940000160330	ENSGT00940000159112.b
Eastern brown snake	MODERN SPECIES	77	IRF2BP1 (ENSPTXG00000016804)	MYPOP (ENSPTXG00000016806)	NOVA2 (ENSPTXG00000016809)	CCDC61 (ENSPTXG00000016815)	QPCTL (ENSPTXG00000016820)	FBXO46 (ENSPTXG00000017123)	ENSPTXG00000017124	SARS2 (ENSPTXG00000017130) #13	NFKBIB (ENSPTXG00000017236)	SIRT2 (ENSPTXG00000017240)	ENSPTXG00000017244	ENSPTXG00000017251	ENSPTXG00000017255	HNRNPL (ENSPTXG00000012356) #19	ECH1 (ENSPTXG00000012357) #21	ENSPTXG00000012361 #17	ENSPTXG00000012363 #17	ACTN4 (ENSPTXG00000012365) #18	EIF3K (ENSPTXG00000012439) #26	ENSPTXG00000012442 #28	RYR1 (ENSPTXG00000012560) #29	ENSPTXG00000019017 #30	RASGRP4 (ENSPTXG00000019018) #31	SPRED3 (ENSPTXG00000019020) #33	PSMD8 (ENSPTXG00000019025) #35	ENSPTXG00000019026	ENSPTXG00000019027	ENSPTXG00000019028 #36	SLC8A2 (ENSPTXG00000019029) #37	ENSPTXG00000019030	ENSPTXG00000019031
Mainland tiger snake	MODERN SPECIES	388						SARS2 (ENSNSUG00000019381) #13	NFKBIB (ENSNSUG00000019379)	SIRT2 (ENSNSUG00000019377)	ENSNSUG00000019372	ENSNSUG00000019367	HNRNPL (ENSNSUG00000019366) #19	ECH1 (ENSNSUG00000019365) #21	ENSNSUG00000019364 #17	ENSNSUG00000019363 #17	ENSNSUG00000019362	ENSNSUG00000019361 #17	ACTN4 (ENSNSUG00000018787) #18
Elapidae_a	ANCESTRAL SPECIES	33	ENSGT00450000040421	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b.b #17	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445.cb #33	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.d
Acanthophiinae	ANCESTRAL SPECIES	32	ENSGT00450000040421	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b.b #17	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.c	ENSGT00390000005826.a.a	ENSGT00940000158431.a.a.a.a.b.a
Mainland tiger snake	MODERN SPECIES	388								SARS2 (ENSNSUG00000019381) #13	NFKBIB (ENSNSUG00000019379)	SIRT2 (ENSNSUG00000019377)	ENSNSUG00000019372	ENSNSUG00000019367	HNRNPL (ENSNSUG00000019366) #19	ECH1 (ENSNSUG00000019365) #21	ENSNSUG00000019364 #17	ENSNSUG00000019363 #17	ENSNSUG00000019362	ENSNSUG00000019361 #17	ACTN4 (ENSNSUG00000018787) #18
Blue-lipped sea krait	MODERN SPECIES	5368											ENSLLTG00000004557	ENSLLTG00000004572	HNRNPL (ENSLLTG00000004578) #19	ECH1 (ENSLLTG00000004597) #21	ENSLLTG00000004611 #17	ENSLLTG00000004628 #17	ENSLLTG00000004653 #17
Indian cobra	MODERN SPECIES	11	MYPOP (ENSNNAG00000016459)	ENSNNAG00000016452	NOVA2 (ENSNNAG00000016444)	ENSNNAG00000016438	QPCTL (ENSNNAG00000016428)	FBXO46 (ENSNNAG00000016374)	ENSNNAG00000016340	SARS2 (ENSNNAG00000016160) #13	NFKBIB (ENSNNAG00000016134)	SIRT2 (ENSNNAG00000015878)	ENSNNAG00000015848	ENSNNAG00000015826	ENSNNAG00000015799	HNRNPL (ENSNNAG00000015748) #19	ENSNNAG00000015721 #17	ENSNNAG00000015675 #17	ENSNNAG00000015667 #17	ENSNNAG00000015648 #17	ENSNNAG00000015639 #17	ENSNNAG00000015628	ENSNNAG00000015604 #17	ACTN4 (ENSNNAG00000013992) #18	ENSNNAG00000013900 #28	EIF3K (ENSNNAG00000013884) #26	ENSNNAG00000013850 #28	RASGRP4 (ENSNNAG00000004377) #31	ENSNNAG00000004328 #32	ENSNNAG00000004317 #33	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223) #35	ENSNNAG00000003932
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	238																ENSGT00940000160378.s.a.b.a #17	ENSGT01050000246816
Indian cobra	DUPLICATION
Indian cobra	DUPLICATION
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	11	ENSNNAG00000016438	QPCTL (ENSNNAG00000016428)	FBXO46 (ENSNNAG00000016374)	ENSNNAG00000016340	SARS2 (ENSNNAG00000016160) #13	NFKBIB (ENSNNAG00000016134)	SIRT2 (ENSNNAG00000015878)	ENSNNAG00000015848	ENSNNAG00000015826	ENSNNAG00000015799	HNRNPL (ENSNNAG00000015748) #19	ENSNNAG00000015721 #17	ENSNNAG00000015675 #17	ENSNNAG00000015667 #17	ENSNNAG00000015648 #17	ENSNNAG00000015639 #17	ENSNNAG00000015628	ENSNNAG00000015604 #17	ACTN4 (ENSNNAG00000013992) #18	ENSNNAG00000013900 #28	EIF3K (ENSNNAG00000013884) #26	ENSNNAG00000013850 #28	RASGRP4 (ENSNNAG00000004377) #31	ENSNNAG00000004328 #32	ENSNNAG00000004317 #33	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223) #35	ENSNNAG00000003932	ENSNNAG00000003835 #36	KPTN (ENSNNAG00000003787)	ENSNNAG00000015768
Indian cobra	MODERN SPECIES	11	FBXO46 (ENSNNAG00000016374)	ENSNNAG00000016340	SARS2 (ENSNNAG00000016160) #13	NFKBIB (ENSNNAG00000016134)	SIRT2 (ENSNNAG00000015878)	ENSNNAG00000015848	ENSNNAG00000015826	ENSNNAG00000015799	HNRNPL (ENSNNAG00000015748) #19	ENSNNAG00000015721 #17	ENSNNAG00000015675 #17	ENSNNAG00000015667 #17	ENSNNAG00000015648 #17	ENSNNAG00000015639 #17	ENSNNAG00000015628	ENSNNAG00000015604 #17	ACTN4 (ENSNNAG00000013992) #18	ENSNNAG00000013900 #28	EIF3K (ENSNNAG00000013884) #26	ENSNNAG00000013850 #28	RASGRP4 (ENSNNAG00000004377) #31	ENSNNAG00000004328 #32	ENSNNAG00000004317 #33	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223) #35	ENSNNAG00000003932	ENSNNAG00000003835 #36	KPTN (ENSNNAG00000003787)	ENSNNAG00000015768	ENSNNAG00000015751	ZNF541 (ENSNNAG00000015741)
Indian cobra	MODERN SPECIES	11	BLVRB (ENSNNAG00000018428)	ENSNNAG00000018432	ENSNNAG00000018434	SHKBP1 (ENSNNAG00000018457)	LTBP4 (ENSNNAG00000018535)	KCNK6 (ENSNNAG00000018546)	YIF1B (ENSNNAG00000018555)	SPINT2 (ENSNNAG00000018577)	PPP1R14A (ENSNNAG00000018594)	ZC3H4 (ENSNNAG00000018598)	SAE1 (ENSNNAG00000018609)	CCDC9 (ENSNNAG00000018616)	ENSNNAG00000018622	DHX34 (ENSNNAG00000018625)	ENSNNAG00000018627	ENSNNAG00000018629 #17	ENSNNAG00000018631 #17	ENSNNAG00000018636 #17	ENSNNAG00000018639	NECTIN2 (ENSNNAG00000018643)	ENSNNAG00000018648	B3GNT8 (ENSNNAG00000018653)
Indian cobra	MODERN SPECIES	11	NOVA2 (ENSNNAG00000016444)	ENSNNAG00000016438	QPCTL (ENSNNAG00000016428)	FBXO46 (ENSNNAG00000016374)	ENSNNAG00000016340	SARS2 (ENSNNAG00000016160) #13	NFKBIB (ENSNNAG00000016134)	SIRT2 (ENSNNAG00000015878)	ENSNNAG00000015848	ENSNNAG00000015826	ENSNNAG00000015799	HNRNPL (ENSNNAG00000015748) #19	ENSNNAG00000015721 #17	ENSNNAG00000015675 #17	ENSNNAG00000015667 #17	ENSNNAG00000015648 #17	ENSNNAG00000015639 #17	ENSNNAG00000015628	ENSNNAG00000015604 #17	ACTN4 (ENSNNAG00000013992) #18	ENSNNAG00000013900 #28	EIF3K (ENSNNAG00000013884) #26	ENSNNAG00000013850 #28	RASGRP4 (ENSNNAG00000004377) #31	ENSNNAG00000004328 #32	ENSNNAG00000004317 #33	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223) #35	ENSNNAG00000003932	ENSNNAG00000003835 #36	KPTN (ENSNNAG00000003787)
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.b.a #17
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.b.a #17
Mainland tiger snake	MODERN SPECIES	2434																ENSNSUG00000000704 #17
Blue-lipped sea krait	MODERN SPECIES	10679																ENSLLTG00000007152 #17
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000160378.s.a.b.b #17
Indian cobra	MODERN SPECIES	11	ENSNNAG00000016452	NOVA2 (ENSNNAG00000016444)	ENSNNAG00000016438	QPCTL (ENSNNAG00000016428)	FBXO46 (ENSNNAG00000016374)	ENSNNAG00000016340	SARS2 (ENSNNAG00000016160) #13	NFKBIB (ENSNNAG00000016134)	SIRT2 (ENSNNAG00000015878)	ENSNNAG00000015848	ENSNNAG00000015826	ENSNNAG00000015799	HNRNPL (ENSNNAG00000015748) #19	ENSNNAG00000015721 #17	ENSNNAG00000015675 #17	ENSNNAG00000015667 #17	ENSNNAG00000015648 #17	ENSNNAG00000015639 #17	ENSNNAG00000015628	ENSNNAG00000015604 #17	ACTN4 (ENSNNAG00000013992) #18	ENSNNAG00000013900 #28	EIF3K (ENSNNAG00000013884) #26	ENSNNAG00000013850 #28	RASGRP4 (ENSNNAG00000004377) #31	ENSNNAG00000004328 #32	ENSNNAG00000004317 #33	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223) #35	ENSNNAG00000003932	ENSNNAG00000003835 #36
Elapidae	ANCESTRAL SPECIES	9	ENSGT00450000040421	ENSGT00860000136302	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445.cb #33	ENSGT00940000170834	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.d
Elapidae_a	ANCESTRAL SPECIES	33	ENSGT00940000162120	ENSGT00450000040421	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b.b #17	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00440000037341.b.b #32	ENSGT00940000161445.cb #33	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37
Blue-lipped sea krait	MODERN SPECIES	5368												ENSLLTG00000004557	ENSLLTG00000004572	HNRNPL (ENSLLTG00000004578) #19	ECH1 (ENSLLTG00000004597) #21	ENSLLTG00000004611 #17	ENSLLTG00000004628 #17	ENSLLTG00000004653 #17
Acanthophiinae	ANCESTRAL SPECIES	32	ENSGT00940000162120	ENSGT00450000040421	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00940000154133.B	ENSGT00390000003107.b	ENSGT00530000064222.a	ENSGT00940000153792.A #13	ENSGT00940000161595	ENSGT00940000157514.a	ENSGT00940000162381	ENSGT00390000018436.b	ENSGT00940000166514	ENSGT01030000234642.a.b.b.d.b.d #19	ENSGT00940000159610 #21	ENSGT00940000160378.s.b #17	ENSGT00940000160378.s.a.a.b.b #17	ENSGT01050000246816	ENSGT00940000160378.s.a.a.b.a #17	ENSGT00940000159343 #18	ENSGT00390000009409 #26	ENSGT00940000160308.eb #28	ENSGT00940000155288.b #29	ENSGT00940000159883 #31	ENSGT00940000161445.bb #33	ENSGT00390000014682.a #35	ENSGT00390000014139	ENSGT00940000161057 #36	ENSGT00940000158344.b #37	ENSGT00390000002548.c	ENSGT00390000005826.a.a
Mainland tiger snake	MODERN SPECIES	388									SARS2 (ENSNSUG00000019381) #13	NFKBIB (ENSNSUG00000019379)	SIRT2 (ENSNSUG00000019377)	ENSNSUG00000019372	ENSNSUG00000019367	HNRNPL (ENSNSUG00000019366) #19	ECH1 (ENSNSUG00000019365) #21	ENSNSUG00000019364 #17	ENSNSUG00000019363 #17	ENSNSUG00000019362	ENSNSUG00000019361 #17	ACTN4 (ENSNSUG00000018787) #18
Indian cobra	MODERN SPECIES	11	IRF2BP1 (ENSNNAG00000016466)	MYPOP (ENSNNAG00000016459)	ENSNNAG00000016452	NOVA2 (ENSNNAG00000016444)	ENSNNAG00000016438	QPCTL (ENSNNAG00000016428)	FBXO46 (ENSNNAG00000016374)	ENSNNAG00000016340	SARS2 (ENSNNAG00000016160) #13	NFKBIB (ENSNNAG00000016134)	SIRT2 (ENSNNAG00000015878)	ENSNNAG00000015848	ENSNNAG00000015826	ENSNNAG00000015799	HNRNPL (ENSNNAG00000015748) #19	ENSNNAG00000015721 #17	ENSNNAG00000015675 #17	ENSNNAG00000015667 #17	ENSNNAG00000015648 #17	ENSNNAG00000015639 #17	ENSNNAG00000015628	ENSNNAG00000015604 #17	ACTN4 (ENSNNAG00000013992) #18	ENSNNAG00000013900 #28	EIF3K (ENSNNAG00000013884) #26	ENSNNAG00000013850 #28	RASGRP4 (ENSNNAG00000004377) #31	ENSNNAG00000004328 #32	ENSNNAG00000004317 #33	ENSNNAG00000004295	PSMD8 (ENSNNAG00000004223) #35
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000160378.t #17
Indian cobra	MODERN SPECIES	11	ENSNNAG00000018434	SHKBP1 (ENSNNAG00000018457)	LTBP4 (ENSNNAG00000018535)	KCNK6 (ENSNNAG00000018546)	YIF1B (ENSNNAG00000018555)	SPINT2 (ENSNNAG00000018577)	PPP1R14A (ENSNNAG00000018594)	ZC3H4 (ENSNNAG00000018598)	SAE1 (ENSNNAG00000018609)	CCDC9 (ENSNNAG00000018616)	ENSNNAG00000018622	DHX34 (ENSNNAG00000018625)	ENSNNAG00000018627	ENSNNAG00000018629 #17	ENSNNAG00000018631 #17	ENSNNAG00000018636 #17	ENSNNAG00000018639	NECTIN2 (ENSNNAG00000018643)	ENSNNAG00000018648	B3GNT8 (ENSNNAG00000018653)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	239	MAP3K10 (ENSLACG00000018827)	ENSLACG00000018823	SIPA1L3 (ENSLACG00000018804)	DPF1 (ENSLACG00000018785)	ENSLACG00000018774	NUMBL (ENSLACG00000018766)	coq8b (ENSLACG00000018738)	SHKBP1 (ENSLACG00000018731)	ITPKC (ENSLACG00000018705)	ENSLACG00000018691	srsf7a (ENSLACG00000018688)	ENSLACG00000018682	ENSLACG00000018676	HNRNPL (ENSLACG00000018662) #19	ECH1 (ENSLACG00000018657) #21	LGALS4 (ENSLACG00000018648) #17	ENSLACG00000018621	EIF3K (ENSLACG00000018612) #26	MAP4K1 (ENSLACG00000018587) #28	ENSLACG00000018581	RYR1 (ENSLACG00000018524) #29	ENSLACG00000018508	ENSLACG00000018497 #30	RASGRP4 (ENSLACG00000018469) #31	ENSLACG00000018461 #32	SPRED3 (ENSLACG00000018451) #33	NCCRP1 (ENSLACG00000018440) #8	ENSLACG00000022259	ENSLACG00000018422	MRPS12 (ENSLACG00000018393) #11	SARS2 (ENSLACG00000018385) #13
Coelacanth	MODERN SPECIES	1582													CLASRP (ENSLACG00000000893)	ENSLACG00000003385	bloc1s3 (ENSLACG00000004082)	ENSLACG00000004385 #17	si:cabz01090165.1 (ENSLACG00000005417)
Actinopterygii	ANCESTRAL SPECIES	209	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00940000161069	ENSGT00940000159256	ENSGT00940000159112.b	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00440000037341.b.b #32	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000160457	ENSGT00390000015495	ENSGT00940000157823
Neopterygii	ANCESTRAL SPECIES	184	ENSGT00940000159112.b	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000160457
Spotted gar	MODERN SPECIES	658	ENSLOCG00000014210	napab (ENSLOCG00000014212)	B3GNT8 (ENSLOCG00000017562)	bckdha (ENSLOCG00000014217)	exosc5 (ENSLOCG00000014220)	TMEM91 (ENSLOCG00000014223)	RSPH6A (ENSLOCG00000014226)	ENSLOCG00000014228	ENSLOCG00000014229	ENSLOCG00000014231	opa3 (ENSLOCG00000014233)	HNRNPUL1 (ENSLOCG00000014236)	RASGRP4 (ENSLOCG00000014243) #31	ENSLOCG00000014247	RYR1 (ENSLOCG00000014248) #29	ENSLOCG00000014276 #17	dmac2 (ENSLOCG00000014282)	kptn (ENSLOCG00000014286)	sirt2 (ENSLOCG00000014292)	ENSLOCG00000014300	ENSLOCG00000014303	meis3 (ENSLOCG00000014306) #36	PRSS16 (ENSLOCG00000014309)	hnrnpl (ENSLOCG00000014311) #19	srsf7a (ENSLOCG00000014314)	slc8a2a (ENSLOCG00000014315) #37	ENSLOCG00000014319	ENSLOCG00000014320	zgc:85932 (ENSLOCG00000014328) #15	eif3k (ENSLOCG00000014336) #26	ENSLOCG00000014339 #28
Osteoglossocephalai	ANCESTRAL SPECIES	102	ENSGT00940000159112.b	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00440000037341.b.b #32	ENSGT00940000159883 #31	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT01080000258246	ENSGT00940000161428	ENSGT00940000160457.a	ENSGT00940000168097
Osteoglossiformes	ANCESTRAL SPECIES	121	ENSGT00390000014835 #7	ENSGT00940000175063	ENSGT00940000159256.o.a	ENSGT00940000159112.b.p	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000005826.a.a	ENSGT00530000063174.b.a	ENSGT00950000183147.A.b.a.d	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b #32	ENSGT00940000159883.f #31	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000163335	ENSGT00940000165793	ENSGT00940000153936.b.b
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	84	dhx34 (ENSPKIG00000013394)	spred3 (ENSPKIG00000013316) #33	psmd8 (ENSPKIG00000013294) #35	EHD2 (ENSPKIG00000013262)	BICRA (ENSPKIG00000013218)	ENSPKIG00000013196	bckdha (ENSPKIG00000013173)	bckdha (ENSPKIG00000013130)	exosc5 (ENSPKIG00000013092)	TMEM91 (ENSPKIG00000013078)	ppp1r13l (ENSPKIG00000013033)	opa3 (ENSPKIG00000013000)	HNRNPUL1 (ENSPKIG00000012976)	rasgrp4 (ENSPKIG00000012918) #31	ENSPKIG00000012714 #29	ENSPKIG00000012612 #17	ENSPKIG00000012585 #17	ENSPKIG00000012555	ENSPKIG00000012536	cyp2y3 (ENSPKIG00000012517)	ENSPKIG00000012490	tgfb1a (ENSPKIG00000012463)	ENSPKIG00000012431	wdr62 (ENSPKIG00000012222)	ENSPKIG00000012070	arrb1 (ENSPKIG00000012007)	ENSPKIG00000011963	ENSPKIG00000011937	ENSPKIG00000011923	ENSPKIG00000011887	ENSPKIG00000011867
P. kingsleyae	MODERN SPECIES	84	spred3 (ENSPKIG00000013316) #33	psmd8 (ENSPKIG00000013294) #35	EHD2 (ENSPKIG00000013262)	BICRA (ENSPKIG00000013218)	ENSPKIG00000013196	bckdha (ENSPKIG00000013173)	bckdha (ENSPKIG00000013130)	exosc5 (ENSPKIG00000013092)	TMEM91 (ENSPKIG00000013078)	ppp1r13l (ENSPKIG00000013033)	opa3 (ENSPKIG00000013000)	HNRNPUL1 (ENSPKIG00000012976)	rasgrp4 (ENSPKIG00000012918) #31	ENSPKIG00000012714 #29	ENSPKIG00000012612 #17	ENSPKIG00000012585 #17	ENSPKIG00000012555	ENSPKIG00000012536	cyp2y3 (ENSPKIG00000012517)	ENSPKIG00000012490	tgfb1a (ENSPKIG00000012463)	ENSPKIG00000012431	wdr62 (ENSPKIG00000012222)	ENSPKIG00000012070	arrb1 (ENSPKIG00000012007)	ENSPKIG00000011963	ENSPKIG00000011937	ENSPKIG00000011923	ENSPKIG00000011887	ENSPKIG00000011867	ENSPKIG00000011856
Asian bonytongue	MODERN SPECIES	1	prdm10 (ENSSFOG00015023130)	APLP2 (ENSSFOG00015023108)	ENSSFOG00015023099	dhx34 (ENSSFOG00015023082)	spred3 (ENSSFOG00015027124) #33	psmd8 (ENSSFOG00015023067) #35	EHD2 (ENSSFOG00015023056)	BICRA (ENSSFOG00015023021)	ENSSFOG00015023004	exosc5 (ENSSFOG00015022999)	TMEM91 (ENSSFOG00015022989)	ppp1r13l (ENSSFOG00015022978)	opa3 (ENSSFOG00015030245)	HNRNPUL1 (ENSSFOG00015022940)	rasgrp4 (ENSSFOG00015022923) #31	LGALS4 (ENSSFOG00015032953) #17	ENSSFOG00015022775	ENSSFOG00015015071	ENSSFOG00015032494	SRSF1 (ENSSFOG00015031626)	ENSSFOG00015015083	ENSSFOG00015015093	TGFB1 (ENSSFOG00015015122)	ENSSFOG00015015134	wdr62 (ENSSFOG00015015148)	ENSSFOG00015028684	ARRB1 (ENSSFOG00015026255)	ENSSFOG00015029256	ENSSFOG00015030939	ENSSFOG00015031364	ENSSFOG00015026981
Clupeocephala	ANCESTRAL SPECIES	9	ENSGT00390000014835 #7	ENSGT00940000175063	ENSGT00940000159256.o	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT01080000258246	ENSGT00940000161428	ENSGT00940000160457.a	ENSGT00940000168097	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00440000038159	ENSGT00940000165761.a	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.b.a	ENSGT00390000007499
Euteleosteomorpha	ANCESTRAL SPECIES	7	ENSGT00390000014835 #7	ENSGT00940000175063	ENSGT00940000159256.o	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00390000007499	ENSGT00390000008135	ENSGT00510000047059	ENSGT00940000159212.a	ENSGT00940000165416	ENSGT00940000156014	ENSGT00560000077232.B.g.a	ENSGT00530000063811.A.a.b	ENSGT01020000230351.E.c
Acanthomorphata	ANCESTRAL SPECIES	8	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000164025.b.a	ENSGT00940000165067	ENSGT00390000007499	ENSGT00390000008135	ENSGT00510000047059	ENSGT00940000159212.a	ENSGT00940000165416	ENSGT00940000156014
Euacanthomorphacea	ANCESTRAL SPECIES	8	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000163648.a.a.a.b	ENSGT00940000164025.b.a	ENSGT00940000165067	ENSGT00390000007499	ENSGT00390000008135	ENSGT00510000047059	ENSGT00940000159212.a	ENSGT00940000156014
Percomorphaceae	ANCESTRAL SPECIES	8	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000164025.b.a	ENSGT00940000165067	ENSGT00390000007499	ENSGT00390000008135	ENSGT00510000047059
Tiger tail seahorse	MODERN SPECIES	517	napab (ENSHCOG00000017742)	B3GNT8 (ENSHCOG00000017779)	bckdha (ENSHCOG00000017812)	exosc5 (ENSHCOG00000017818)	TMEM91 (ENSHCOG00000017828)	ppp1r13l (ENSHCOG00000017839)	opa3 (ENSHCOG00000017859)	ENSHCOG00000017869	ENSHCOG00000017886	ENSHCOG00000017895	ENSHCOG00000017916	HNRNPUL1 (ENSHCOG00000017927)	rasgrp4 (ENSHCOG00000017976) #31	ENSHCOG00000018015 ##29	ENSHCOG00000018228 #29	LGALS4 (ENSHCOG00000018257) #17	AXL (ENSHCOG00000018285)	ENSHCOG00000018325	ENSHCOG00000018340	ENSHCOG00000018362	ENSHCOG00000018373	tgfb1a (ENSHCOG00000018390)	ppp5c (ENSHCOG00000018425)	ENSHCOG00000018439	ENSHCOG00000018448	ENSHCOG00000018451	CLDN4 (ENSHCOG00000018558)	cldne (ENSHCOG00000018565)	ENSHCOG00000018582	ENSHCOG00000018590	sbds (ENSHCOG00000018606)
Percomorphaceae_B	ANCESTRAL SPECIES	13	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.b
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.b.a.a.a.b	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.b.a.a.a.b	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000164025.a.b.b	ENSGT00940000164025.a.b.a
Carangaria	ANCESTRAL SPECIES	8	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165067.h	ENSGT00940000165704.a.b
Seriola	ANCESTRAL SPECIES	38	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165067.h	ENSGT00940000165704.a.b
Greater amberjack	MODERN SPECIES	14	spred3 (ENSSDUG00000021050) #33	psmd8 (ENSSDUG00000021066) #35	nup88 (ENSSDUG00000000062)	EHD2 (ENSSDUG00000000141)	ENSSDUG00000000185	napab (ENSSDUG00000000247)	B3GNT8 (ENSSDUG00000000300)	bckdha (ENSSDUG00000000310)	exosc5 (ENSSDUG00000000339)	TMEM91 (ENSSDUG00000000359)	ppp1r13l (ENSSDUG00000000375)	opa3 (ENSSDUG00000000385)	HNRNPUL1 (ENSSDUG00000000399)	rasgrp4 (ENSSDUG00000000527) #31	ENSSDUG00000000548 #29	LGALS4 (ENSSDUG00000000893) #17	AXL (ENSSDUG00000000965)	ENSSDUG00000000982	ENSSDUG00000000994	ENSSDUG00000001155	ENSSDUG00000001164	tgfb1a (ENSSDUG00000001200)	ppp5c (ENSSDUG00000001230)	ENSSDUG00000001269	ENSSDUG00000001279	ENSSDUG00000001286	ENSSDUG00000001306	cldna (ENSSDUG00000001315)	ENSSDUG00000001332	ENSSDUG00000001482	ENSSDUG00000001493
Yellowtail amberjack	MODERN SPECIES	2952	spred3 (ENSSLDG00000005454) #33	psmd8 (ENSSLDG00000005426) #35	nup88 (ENSSLDG00000005395)	ENSSLDG00000005384	EHD2 (ENSSLDG00000005368)	BICRA (ENSSLDG00000005347)	napab (ENSSLDG00000005299)	bckdha (ENSSLDG00000005250)	exosc5 (ENSSLDG00000005218)	TMEM91 (ENSSLDG00000005208)	ppp1r13l (ENSSLDG00000005186)	opa3 (ENSSLDG00000005166)	HNRNPUL1 (ENSSLDG00000005140)	rasgrp4 (ENSSLDG00000005048) #31	ENSSLDG00000004741 #29	LGALS4 (ENSSLDG00000004714) #17	AXL (ENSSLDG00000004682)	ENSSLDG00000004669	ENSSLDG00000004651	ENSSLDG00000004634	ENSSLDG00000004609	tgfb1a (ENSSLDG00000004564)	ppp5c (ENSSLDG00000004475)	ENSSLDG00000004436	ENSSLDG00000004328	ENSSLDG00000004238	ENSSLDG00000004203	cldnf (ENSSLDG00000003805)	ENSSLDG00000003759	cldne (ENSSLDG00000003733)	cldnj (ENSSLDG00000003716)
Barramundi perch	MODERN SPECIES	109	spred3 (ENSLCAG00010005795) #33	psmd8 (ENSLCAG00010005812) #35	nup88 (ENSLCAG00010005855)	EHD2 (ENSLCAG00010005860)	BICRA (ENSLCAG00010005865)	napab (ENSLCAG00010005890)	B3GNT8 (ENSLCAG00010005914)	bckdha (ENSLCAG00010005922)	exosc5 (ENSLCAG00010005933)	ENSLCAG00010005938	ppp1r13l (ENSLCAG00010005946)	opa3 (ENSLCAG00010005951)	HNRNPUL1 (ENSLCAG00010005959)	rasgrp4 (ENSLCAG00010005974) #31	ryr1b (ENSLCAG00010006187) #29	LGALS4 (ENSLCAG00010006902) #17	AXL (ENSLCAG00010006919)	cyp2y3 (ENSLCAG00010007079)	ENSLCAG00010007396	ENSLCAG00010007400	ENSLCAG00010007404	tgfb1a (ENSLCAG00010007407)	ppp5c (ENSLCAG00010007521)	ENSLCAG00010007849	GCGR (ENSLCAG00010007856)	ENSLCAG00010007863	ENSLCAG00010007867	ENSLCAG00010007868	cldna (ENSLCAG00010007870)	ENSLCAG00010007874	ENSLCAG00010007876
Pleuronectoidei	ANCESTRAL SPECIES	35	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000164025.a.a.a.b	ENSGT00940000164025.b.a
Turbot	MODERN SPECIES	15	ENSSMAG00000029001	ENSSMAG00000020165	foxa3 (ENSSMAG00000022453)	irf2bp1 (ENSSMAG00000020176)	ENSSMAG00000027207	ENSSMAG00000020189	ENSSMAG00000020203	ENSSMAG00000020214	exosc5 (ENSSMAG00000020240)	ENSSMAG00000020246	ppp1r13l (ENSSMAG00000020248)	opa3 (ENSSMAG00000034179)	ENSSMAG00000020270	rasgrp4 (ENSSMAG00000020287) #31	ryr1b (ENSSMAG00000020308) #29	ENSSMAG00000020354 #17	ENSSMAG00000020356	ENSSMAG00000020359	ENSSMAG00000020362	ENSSMAG00000020369	ppp5c (ENSSMAG00000020370)	ENSSMAG00000030263	ENSSMAG00000020380	ENSSMAG00000028748	ENSSMAG00000020383	ENSSMAG00000020406	ENSSMAG00000020464	ENSSMAG00000026645	ENSSMAG00000020502	ENSSMAG00000028969	ENSSMAG00000020504
Tongue sole	MODERN SPECIES	14	GALNT17 (ENSCSEG00000005839)	CALN1 (ENSCSEG00000005832)	tyw1 (ENSCSEG00000005810)	ENSCSEG00000005805	sbds (ENSCSEG00000005798)	ENSCSEG00000005788	ENSCSEG00000005687	ENSCSEG00000005683	CLDN3 (ENSCSEG00000005678)	LRRC8A (ENSCSEG00000005677)	ENSCSEG00000005674	opa3 (ENSCSEG00000005669)	HNRNPUL1 (ENSCSEG00000005657)	rasgrp4 (ENSCSEG00000005639) #31	ENSCSEG00000005579 #29	LGALS4 (ENSCSEG00000005573) #17	AXL (ENSCSEG00000005564)	ENSCSEG00000005561	cyp2y3 (ENSCSEG00000005555)	ENSCSEG00000005551	ENSCSEG00000005549	tgfb1a (ENSCSEG00000005544)	ppp5c (ENSCSEG00000005534)	prcp (ENSCSEG00000005520)	ENSCSEG00000005516	FAM181B (ENSCSEG00000005508)	tenm4 (ENSCSEG00000005488)	nars2 (ENSCSEG00000005464)	GAB2 (ENSCSEG00000005457)	ENSCSEG00000005449	yap1 (ENSCSEG00000005445)
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000164025.a.b.a
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000014118 #33	psmd8 (ENSMAMG00000025760) #35	ENSMAMG00000028258	EHD2 (ENSMAMG00000014192)	ENSMAMG00000014214	napab (ENSMAMG00000014239)	B3GNT8 (ENSMAMG00000014275)	bckdha (ENSMAMG00000014291)	exosc5 (ENSMAMG00000027538)	TMEM91 (ENSMAMG00000014339)	ppp1r13l (ENSMAMG00000014349)	opa3 (ENSMAMG00000014366)	ENSMAMG00000014383	rasgrp4 (ENSMAMG00000014433) #31	ryr1b (ENSMAMG00000014480) #29	ENSMAMG00000014740 #17	ENSMAMG00000014817	ENSMAMG00000028238	ENSMAMG00000014850	ENSMAMG00000028447	ENSMAMG00000015237	ENSMAMG00000015263	ppp5c (ENSMAMG00000015276)	ENSMAMG00000027650	ENSMAMG00000015307	ENSMAMG00000015342	ENSMAMG00000015355	ENSMAMG00000015371	ENSMAMG00000025595	ENSMAMG00000027763	ENSMAMG00000024535
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.i	ENSGT00940000162064.h	ENSGT00940000166615	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000164025.a.b.a	ENSGT00940000165704.b	ENSGT00940000164025.b.a
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	4	psmd8 (ENSATEG00000009055) #35	ENSATEG00000027661	EHD2 (ENSATEG00000009021)	ENSATEG00000008981	napab (ENSATEG00000008946)	B3GNT8 (ENSATEG00000008936)	bckdha (ENSATEG00000029863)	exosc5 (ENSATEG00000008886)	TMEM91 (ENSATEG00000008873)	ppp1r13l (ENSATEG00000008851)	opa3 (ENSATEG00000025858)	ENSATEG00000008814	rasgrp4 (ENSATEG00000008725) #31	ryr1b (ENSATEG00000008379) #29	ENSATEG00000029082 #17	ENSATEG00000008270 #17	ENSATEG00000008244	ENSATEG00000008227	ENSATEG00000008005	ENSATEG00000007765	ENSATEG00000007440	ENSATEG00000007436	ppp5c (ENSATEG00000007377)	ENSATEG00000029312	ENSATEG00000007293	ENSATEG00000026476	ENSATEG00000007258	ENSATEG00000029434	ENSATEG00000006958	ENSATEG00000027065	ENSATEG00000027784
Climbing perch	MODERN SPECIES	4	ENSATEG00000025393 #33	psmd8 (ENSATEG00000009055) #35	ENSATEG00000027661	EHD2 (ENSATEG00000009021)	ENSATEG00000008981	napab (ENSATEG00000008946)	B3GNT8 (ENSATEG00000008936)	bckdha (ENSATEG00000029863)	exosc5 (ENSATEG00000008886)	TMEM91 (ENSATEG00000008873)	ppp1r13l (ENSATEG00000008851)	opa3 (ENSATEG00000025858)	ENSATEG00000008814	rasgrp4 (ENSATEG00000008725) #31	ryr1b (ENSATEG00000008379) #29	ENSATEG00000029082 #17	ENSATEG00000008270 #17	ENSATEG00000008244	ENSATEG00000008227	ENSATEG00000008005	ENSATEG00000007765	ENSATEG00000007440	ENSATEG00000007436	ppp5c (ENSATEG00000007377)	ENSATEG00000029312	ENSATEG00000007293	ENSATEG00000026476	ENSATEG00000007258	ENSATEG00000029434	ENSATEG00000006958	ENSATEG00000027065
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000164025.a.b.b
Tetraodontidae	ANCESTRAL SPECIES	10	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b	ENSGT00940000159077.j	ENSGT00940000159077.i	ENSGT00940000164824.B	ENSGT00940000164824.A	ENSGT00940000156294.c.b	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00390000006852.A	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000166615	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000165704.b	ENSGT00940000164025.b.a
Fugu	DUPLICATION
Fugu	MODERN SPECIES	2	ENSTRUG00000014559	GBE1 (ENSTRUG00000014640)	cadm2b (ENSTRUG00000014715)	rwdd2b (ENSTRUG00000014841)	usp16 (ENSTRUG00000014855)	ENSTRUG00000030732	GRIK1 (ENSTRUG00000014961)	cldn8.3 (ENSTRUG00000015027)	CLDN8 (ENSTRUG00000027102)	cldn8.2 (ENSTRUG00000015037)	TIAM1 (ENSTRUG00000015042)	opa3 (ENSTRUG00000015146)	HNRNPUL1 (ENSTRUG00000015154)	rasgrp4 (ENSTRUG00000015227) #31	ENSTRUG00000033353 #17	LGALS4 (ENSTRUG00000020566) #17	AXL (ENSTRUG00000015755)	ENSTRUG00000026339	cyp2y3 (ENSTRUG00000015833)	ENSTRUG00000015948	tgf-beta1 (ENSTRUG00000015978)	ppp5c (ENSTRUG00000016020)	ENSTRUG00000023097	CLDN3 (ENSTRUG00000019624)	ENSTRUG00000025233	cldna (ENSTRUG00000020771)	ENSTRUG00000016074	cldn27b (ENSTRUG00000032608)	cldn28a (ENSTRUG00000023505)	ENSTRUG00000016090	cldn6 (ENSTRUG00000029514)
Fugu	MODERN SPECIES	2	ENSTRUG00000014536	ENSTRUG00000014559	GBE1 (ENSTRUG00000014640)	cadm2b (ENSTRUG00000014715)	rwdd2b (ENSTRUG00000014841)	usp16 (ENSTRUG00000014855)	ENSTRUG00000030732	GRIK1 (ENSTRUG00000014961)	cldn8.3 (ENSTRUG00000015027)	CLDN8 (ENSTRUG00000027102)	cldn8.2 (ENSTRUG00000015037)	TIAM1 (ENSTRUG00000015042)	opa3 (ENSTRUG00000015146)	HNRNPUL1 (ENSTRUG00000015154)	rasgrp4 (ENSTRUG00000015227) #31	ENSTRUG00000033353 #17	LGALS4 (ENSTRUG00000020566) #17	AXL (ENSTRUG00000015755)	ENSTRUG00000026339	cyp2y3 (ENSTRUG00000015833)	ENSTRUG00000015948	tgf-beta1 (ENSTRUG00000015978)	ppp5c (ENSTRUG00000016020)	ENSTRUG00000023097	CLDN3 (ENSTRUG00000019624)	ENSTRUG00000025233	cldna (ENSTRUG00000020771)	ENSTRUG00000016074	cldn27b (ENSTRUG00000032608)	cldn28a (ENSTRUG00000023505)	ENSTRUG00000016090
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000164025.a.b.b
Ballan wrasse	MODERN SPECIES	325	spred3 (ENSLBEG00000018405) #33	psmd8 (ENSLBEG00000018382) #35	nup88 (ENSLBEG00000018359)	EHD2 (ENSLBEG00000018343)	BICRA (ENSLBEG00000018311)	napab (ENSLBEG00000018273)	B3GNT8 (ENSLBEG00000018247)	bckdha (ENSLBEG00000018234)	exosc5 (ENSLBEG00000018216)	TMEM91 (ENSLBEG00000018200)	ppp1r13l (ENSLBEG00000018172)	opa3 (ENSLBEG00000018155)	HNRNPUL1 (ENSLBEG00000018092)	rasgrp4 (ENSLBEG00000018003) #31	ENSLBEG00000017765 #29	LGALS4 (ENSLBEG00000017655) #17	AXL (ENSLBEG00000017604)	ENSLBEG00000017581	ENSLBEG00000017543	ENSLBEG00000017434	ENSLBEG00000017346	tgfb1a (ENSLBEG00000017295)	ppp5c (ENSLBEG00000017243)	ENSLBEG00000017216	ENSLBEG00000017150	cldna (ENSLBEG00000017050)	ENSLBEG00000016887	ENSLBEG00000016874	ENSLBEG00000016749	ENSLBEG00000016713	sbds (ENSLBEG00000016687)
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000166615	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b
Perciformes	ANCESTRAL SPECIES	10	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000166615	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00940000158721	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000164025.b.a	ENSGT00940000165067	ENSGT00390000007499	ENSGT00390000008135
Channel bull blenny	MODERN SPECIES	4	ENSCGOG00000011429	dhx34 (ENSCGOG00000011508)	spred3 (ENSCGOG00000011541) #33	psmd8 (ENSCGOG00000011548) #35	nup88 (ENSCGOG00000011703)	EHD2 (ENSCGOG00000011706)	BICRA (ENSCGOG00000011718)	napab (ENSCGOG00000011743)	ENSCGOG00000012879	bckdha (ENSCGOG00000012883)	ppp1r13l (ENSCGOG00000012983)	opa3 (ENSCGOG00000012986)	HNRNPUL1 (ENSCGOG00000012997)	rasgrp4 (ENSCGOG00000013171) #31	ENSCGOG00000013336 #29	LGALS4 (ENSCGOG00000014756) #17	AXL (ENSCGOG00000014768)	ENSCGOG00000015056	ENSCGOG00000015731	ENSCGOG00000015897	tgfb1a (ENSCGOG00000015903)	ppp5c (ENSCGOG00000015923)	ENSCGOG00000016814	GCGR (ENSCGOG00000016820)	ENSCGOG00000016859	CLDN3 (ENSCGOG00000016861)	ENSCGOG00000016866	ENSCGOG00000016873	cldnj (ENSCGOG00000016882)	sbds (ENSCGOG00000016885)	ENSCGOG00000016910
Pike perch	MODERN SPECIES	112	ULK2 (ENSSLUG00000009050)	tmem97 (ENSSLUG00000009027)	ENSSLUG00000009016	USP6 (ENSSLUG00000008733)	ENSSLUG00000008690	appbp2 (ENSSLUG00000008674)	ppm1da (ENSSLUG00000008669)	brip1 (ENSSLUG00000025703)	tbx4 (ENSSLUG00000025697)	tbx2b (ENSSLUG00000025693)	bcas3 (ENSSLUG00000025663)	opa3 (ENSSLUG00000025642)	HNRNPUL1 (ENSSLUG00000025614)	rasgrp4 (ENSSLUG00000025486) #31	ENSSLUG00000024889 #29	LGALS4 (ENSSLUG00000024659) #17	AXL (ENSSLUG00000024232)	ENSSLUG00000024164	ENSSLUG00000024160	ENSSLUG00000024126	ENSSLUG00000024096	tgfb1a (ENSSLUG00000024085)	ppp5c (ENSSLUG00000023906)	ENSSLUG00000023857	GCGR (ENSSLUG00000023797)	ENSSLUG00000023776	ENSSLUG00000023771	ENSSLUG00000023768	ENSSLUG00000023765	ENSSLUG00000023761	cldnj (ENSSLUG00000023757)
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000166615	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.b.a	ENSGT00940000165067
Lumpfish	MODERN SPECIES	4	ENSCLMG00005009489 #33	ENSCLMG00005009490 #33	psmd8 (ENSCLMG00005009493) #35	nup88 (ENSCLMG00005009504)	EHD2 (ENSCLMG00005009506)	BICRA (ENSCLMG00005009514)	napab (ENSCLMG00005009523)	B3GNT8 (ENSCLMG00005009608)	bckdha (ENSCLMG00005009609)	exosc5 (ENSCLMG00005009610)	TMEM91 (ENSCLMG00005009611)	ppp1r13l (ENSCLMG00005009612)	opa3 (ENSCLMG00005009613)	HNRNPUL1 (ENSCLMG00005009617)	rasgrp4 (ENSCLMG00005010562) #31	LGALS4 (ENSCLMG00005010933) #17	AXL (ENSCLMG00005010942)	ENSCLMG00005010971	ENSCLMG00005010972	ENSCLMG00005011790	ENSCLMG00005011791	tgfb1a (ENSCLMG00005011794)	ppp5c (ENSCLMG00005011797)	ENSCLMG00005011842	ENSCLMG00005011844	ENSCLMG00005011845	CLDN3 (ENSCLMG00005011846)	ENSCLMG00005011847	cldna (ENSCLMG00005011848)	ENSCLMG00005011849	cldnf (ENSCLMG00005011850)
Stickleback	MODERN SPECIES		dhx34 (ENSGACG00000013085)	spred3 (ENSGACG00000013083) #33	psmd8 (ENSGACG00000013044) #35	nup88 (ENSGACG00000013042)	EHD2 (ENSGACG00000013023)	BICRA (ENSGACG00000013015)	napab (ENSGACG00000013006)	bckdha (ENSGACG00000012993)	exosc5 (ENSGACG00000012986)	TMEM91 (ENSGACG00000012985)	ppp1r13l (ENSGACG00000012983)	opa3 (ENSGACG00000012981)	HNRNPUL1 (ENSGACG00000012973)	rasgrp4 (ENSGACG00000012966) #31	ENSGACG00000012940 #29	LGALS4 (ENSGACG00000012917) #17	AXL (ENSGACG00000012909)	ENSGACG00000012904	cyp2y3 (ENSGACG00000012840)	ENSGACG00000012821	tgfb1a (ENSGACG00000012798)	ppp5c (ENSGACG00000012759)	ENSGACG00000012756	ENSGACG00000012747	ENSGACG00000012743	ENSGACG00000012742	CLDN4 (ENSGACG00000012739)	ENSGACG00000012735	cldnf (ENSGACG00000012732)	CLDN4 (ENSGACG00000012725)	ENSGACG00000012723
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000164025.a.a.a.b
Gilthead seabream	MODERN SPECIES	11	psmd8 (ENSSAUG00010021649) #35	nup88 (ENSSAUG00010021646)	EHD2 (ENSSAUG00010021645)	ENSSAUG00010021643	napab (ENSSAUG00010021632)	B3GNT8 (ENSSAUG00010021629)	bckdha (ENSSAUG00010021628)	ENSSAUG00010021626	exosc5 (ENSSAUG00010021621)	TMEM91 (ENSSAUG00010021617)	ppp1r13l (ENSSAUG00010021613)	opa3 (ENSSAUG00010021611)	HNRNPUL1 (ENSSAUG00010021019)	rasgrp4 (ENSSAUG00010019800) #31	ryr1b (ENSSAUG00010018507) #29	LGALS4 (ENSSAUG00010018411) #17	AXL (ENSSAUG00010017657)	ENSSAUG00010017647	ENSSAUG00010017629	ENSSAUG00010017623	ENSSAUG00010017615	ENSSAUG00010017567	ENSSAUG00010016775	ENSSAUG00010016772	tgfb1a (ENSSAUG00010016750)	ppp5c (ENSSAUG00010016041)	ENSSAUG00010016040	GCGR (ENSSAUG00010016034)	ENSSAUG00010016032	ENSSAUG00010016029	ENSSAUG00010016028
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000164025.b.a
Large yellow croaker	MODERN SPECIES	479	ENSLCRG00005005257	yap1 (ENSLCRG00005005259)	ENSLCRG00005005271	ENSLCRG00005005272	GAB2 (ENSLCRG00005005273)	nars2 (ENSLCRG00005005276)	tenm4 (ENSLCRG00005005285)	prcp (ENSLCRG00005005300)	exosc5 (ENSLCRG00005005303)	TMEM91 (ENSLCRG00005005304)	ppp1r13l (ENSLCRG00005005305)	opa3 (ENSLCRG00005005306)	HNRNPUL1 (ENSLCRG00005005308)	rasgrp4 (ENSLCRG00005006119) #31	ryr1b (ENSLCRG00005006706) #29	LGALS4 (ENSLCRG00005006952) #17	ENSLCRG00005006954	AXL (ENSLCRG00005006955)	ENSLCRG00005006982	ENSLCRG00005006985	ENSLCRG00005007014	ENSLCRG00005008219	tgfb1a (ENSLCRG00005008221)	ppp5c (ENSLCRG00005008222)	ENSLCRG00005008225	GCGR (ENSLCRG00005008228)	ENSLCRG00005008233	ENSLCRG00005008234	ENSLCRG00005008236	ENSLCRG00005008239	cldnf (ENSLCRG00005008240)
European seabass	MODERN SPECIES	3	ENSDLAG00005004441	dhx34 (ENSDLAG00005005226)	ENSDLAG00005027387 #33	psmd8 (ENSDLAG00005031438) #35	ENSDLAG00005005359	ENSDLAG00005005378	napab (ENSDLAG00005028625)	B3GNT8 (ENSDLAG00005029569)	ENSDLAG00005005504	exosc5 (ENSDLAG00005005510)	TMEM91 (ENSDLAG00005028277)	ppp1r13l (ENSDLAG00005005525)	hnrnpul1 (ENSDLAG00005005544)	rasgrp4 (ENSDLAG00005005646) #31	ENSDLAG00005006473 #29	ENSDLAG00005009065 #17	ENSDLAG00005009096	ENSDLAG00005009539	ENSDLAG00005009558	ENSDLAG00005009850	ENSDLAG00005031561	ppp5c (ENSDLAG00005009908)	ENSDLAG00005010449	ENSDLAG00005010469	ENSDLAG00005010475	cldnf (ENSDLAG00005026658)	ENSDLAG00005035087	ENSDLAG00005026580	ENSDLAG00005010496	ENSDLAG00005033601	ENSDLAG00005029214
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000157969	ENSGT00940000163648.a.a.a.b	ENSGT00390000007499	ENSGT00390000008135	ENSGT00510000047059	ENSGT00940000159212.a
Atherinomorphae	ANCESTRAL SPECIES	15									ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00390000007499	ENSGT00390000008135	ENSGT00510000047059	ENSGT00940000159212.a	ENSGT00940000156014.g	ENSGT00390000010744.m.c	ENSGT00940000177245
Oryzias	ANCESTRAL SPECIES	32	ENSGT00390000011810	ENSGT00970000193454	ENSGT01030000234642.a.b.b.d.b.c.a ##19	ENSGT00910000144115.b	ENSGT00940000158344.a.a ##37	ENSGT00940000159343 #18	ENSGT00940000165978 #15	ENSGT00390000009409 #26	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000165067	ENSGT00390000007499
Oryzias_b	ANCESTRAL SPECIES	32	ENSGT00390000011810	ENSGT00970000193454	ENSGT01030000234642.a.b.b.d.b.c.a ##19	ENSGT00910000144115.b	ENSGT00940000158344.a.a ##37	ENSGT00940000159343 #18	ENSGT00940000165978 #15	ENSGT00390000009409 #26	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.j.a.b	ENSGT00940000162064.h.j.b	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000162095.i.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000165067	ENSGT00390000007499
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	12	ENSOMEG00000021538 #18	zgc:85932 (ENSOMEG00000021620) #15	eif3k (ENSOMEG00000021661) #26	ENSOMEG00000021692	ENSOMEG00000021711	ENSOMEG00000021733	exosc5 (ENSOMEG00000021763)	ENSOMEG00000021779	ppp1r13l (ENSOMEG00000021814)	opa3 (ENSOMEG00000021842)	ENSOMEG00000021857	HNRNPUL1 (ENSOMEG00000021915)	rasgrp4 (ENSOMEG00000021968) #31	ENSOMEG00000022012 #29	ENSOMEG00000022207 #29	LGALS4 (ENSOMEG00000022262) #17	AXL (ENSOMEG00000022298)	ENSOMEG00000022314	ENSOMEG00000022337	ENSOMEG00000022367	ENSOMEG00000022395	ENSOMEG00000022410	ENSOMEG00000022433	ENSOMEG00000022435	ENSOMEG00000022454	ENSOMEG00000022518	tgfb1a (ENSOMEG00000022542)	ppp5c (ENSOMEG00000022570)	ENSOMEG00000022579	ENSOMEG00000022611	ENSOMEG00000022628
Indian medaka	MODERN SPECIES	291																ENSOMEG00000021391 #17
Javanese ricefish	MODERN SPECIES	4	hnrnpl2 (ENSOJAG00000023449) ##19	srsf7a (ENSOJAG00000023443)	ENSOJAG00000022992 #18	zgc:85932 (ENSOJAG00000022849) #15	eif3k (ENSOJAG00000022837) #26	ENSOJAG00000022823	ENSOJAG00000022793	ENSOJAG00000022753	ENSOJAG00000022730	exosc5 (ENSOJAG00000022721)	TMEM91 (ENSOJAG00000022717)	ppp1r13l (ENSOJAG00000022712)	opa3 (ENSOJAG00000022711)	HNRNPUL1 (ENSOJAG00000022641)	rasgrp4 (ENSOJAG00000022604) #31	LGALS4 (ENSOJAG00000010929) #17	AXL (ENSOJAG00000009489)	ENSOJAG00000009341	ENSOJAG00000008629	ENSOJAG00000008550	ENSOJAG00000008507	tgfb1a (ENSOJAG00000008490)	ppp5c (ENSOJAG00000008314)	ENSOJAG00000008298	ENSOJAG00000008288	ENSOJAG00000008273	ENSOJAG00000008265	cldna (ENSOJAG00000008259)	cldna (ENSOJAG00000008243)	cldne (ENSOJAG00000008234)	cldnf (ENSOJAG00000008225)
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT01030000234642.a.b.b.d.b.c.a ##19	ENSGT00910000144115.b	ENSGT00940000158344.a.a ##37	ENSGT00940000159343 #18	ENSGT00940000165978 #15	ENSGT00390000009409 #26	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.b	ENSGT00940000165067	ENSGT00390000010744.m.c	ENSGT00940000156014.g	ENSGT00940000159212.a	ENSGT00510000047059
Japanese Medaka HdrR	MODERN SPECIES	4	med17 (ENSORLG00000000709)	ENSORLG00000000715	hnrnpl2 (ENSORLG00000000724) ##19	srsf7a (ENSORLG00000000746)	slc8a2b (ENSORLG00000000756) ##37	ENSORLG00000000939 #18	zgc:85932 (ENSORLG00000000963) #15	EIF3K (ENSORLG00000000980) #26	TMEM91 (ENSORLG00000000984)	ppp1r13l (ENSORLG00000000990)	opa3 (ENSORLG00000000996)	HNRNPUL1 (ENSORLG00000001002)	rasgrp4 (ENSORLG00000001029) #31	ENSORLG00000001057 #29	ENSORLG00000023441 #29	LGALS4 (ENSORLG00000001085) #17	AXL (ENSORLG00000001116)	ENSORLG00000001238	ENSORLG00000001225	ENSORLG00000029103	ENSORLG00000001255	tgfb1a (ENSORLG00000001272)	ENSORLG00000022194	ppp5c (ENSORLG00000001301)	ENSORLG00000001306	ENSORLG00000001315	ENSORLG00000001319	ENSORLG00000001323	ENSORLG00000001331	ENSORLG00000027059	ENSORLG00000001327
Chinese medaka	MODERN SPECIES	538					ENSOSIG00000010554 ##19	srsf7a (ENSOSIG00000010556)	slc8a2b (ENSOSIG00000010566) ##37	ACTN4 (ENSOSIG00000010945) #18	zgc:85932 (ENSOSIG00000012175) #15	TMEM91 (ENSOSIG00000012176)	ppp1r13l (ENSOSIG00000012177)	opa3 (ENSOSIG00000012179)	HNRNPUL1 (ENSOSIG00000012181)	ENSOSIG00000012220 #31	ppp5c (ENSOSIG00000012706)	ENSOSIG00000012735 #17	AXL (ENSOSIG00000012736)	ENSOSIG00000012737	ENSOSIG00000012740	tgfb1a (ENSOSIG00000012742)	ENSOSIG00000012744	ENSOSIG00000012747	cldnj (ENSOSIG00000012749)	GALNT17 (ENSOSIG00000012752)	ENSOSIG00000012755	tyw1 (ENSOSIG00000012772)	sbds (ENSOSIG00000013618)	ENSOSIG00000013619	foxa3 (ENSOSIG00000013623)	irf2bp1 (ENSOSIG00000013626)	ENSOSIG00000013630
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00530000064359.c.a.n	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000164025.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000164025.b.a
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00940000155350.g	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000164025.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000164025.b.a	ENSGT00940000165067
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00940000155350.g	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.g	ENSGT00940000162064.h.h	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.b.a.a.a.b	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000164025.a.b.b	ENSGT00940000154762.a.a
Poecilia	DUPLICATION
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000155350.g	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.db #17	ENSGT00940000160378.eb #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.g	ENSGT00940000162064.h.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b
NAME_6	ANCESTRAL SPECIES	14	ENSGT00940000155350.g	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.db #17	ENSGT00940000160378.eb #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.g	ENSGT00940000162064.h.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b
Amazon molly	MODERN SPECIES	300	myo7aa (ENSPFOG00000013226)	ENSPFOG00000013806	zgc:171927 (ENSPFOG00000013810)	rps3 (ENSPFOG00000013835)	KCTD14 (ENSPFOG00000013871)	ENSPFOG00000023884	INTS4 (ENSPFOG00000013927)	aamdc (ENSPFOG00000014143)	exosc5 (ENSPFOG00000014158)	ENSPFOG00000014214	ppp1r13l (ENSPFOG00000014217)	opa3 (ENSPFOG00000014228)	HNRNPUL1 (ENSPFOG00000014230)	rasgrp4 (ENSPFOG00000014332) #31	ENSPFOG00000014449 #29	ENSPFOG00000015464 #17	ENSPFOG00000015514	ENSPFOG00000015651	ENSPFOG00000024283	ENSPFOG00000015659	ENSPFOG00000015723	tgfb1a (ENSPFOG00000015762)	ppp5c (ENSPFOG00000015782)	ENSPFOG00000015832	ENSPFOG00000020226	ENSPFOG00000015834	ENSPFOG00000020476	cldna (ENSPFOG00000020477)	ENSPFOG00000020478	cldnf (ENSPFOG00000020479)	CLDN4 (ENSPFOG00000020480)
Guppy	MODERN SPECIES	216																ENSPREG00000015715 #17
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.db #17	ENSGT00940000160378.eb #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.g	ENSGT00940000162064.h.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000164025.b.a
NAME_6	ANCESTRAL SPECIES	14	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.db #17	ENSGT00940000160378.eb #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.g	ENSGT00940000162064.h.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000164025.b.a
Sailfin molly	MODERN SPECIES	15															ENSPLAG00000004440 #29	LGALS4 (ENSPLAG00000004315) #17	ENSPLAG00000004248	ENSPLAG00000004237	ENSPLAG00000004214	ENSPLAG00000004118	ENSPLAG00000003942	tgfb1a (ENSPLAG00000003919)	ppp5c (ENSPLAG00000003894)	ENSPLAG00000003858	ENSPLAG00000003853	ENSPLAG00000003810	ENSPLAG00000003799	ENSPLAG00000003703	cldnj (ENSPLAG00000003687)	ENSPLAG00000003648	sbds (ENSPLAG00000003641)
Guppy	MODERN SPECIES	443	myo7aa (ENSPREG00000017413)	ENSPREG00000017495	zgc:171927 (ENSPREG00000017517)	rps3 (ENSPREG00000017536)	KCTD14 (ENSPREG00000017593)	ENSPREG00000017611	INTS4 (ENSPREG00000017623)	aamdc (ENSPREG00000017651)	exosc5 (ENSPREG00000017723)	TMEM91 (ENSPREG00000017731)	ppp1r13l (ENSPREG00000017741)	opa3 (ENSPREG00000017788)	HNRNPUL1 (ENSPREG00000017804)	rasgrp4 (ENSPREG00000017845) #31	ENSPREG00000017900 #29	ENSPREG00000018025 #17	AXL (ENSPREG00000018073)	ENSPREG00000018156	ENSPREG00000018189	ENSPREG00000018304	ENSPREG00000018327	tgfb1a (ENSPREG00000018342)	ppp5c (ENSPREG00000018361)	ENSPREG00000018375	ENSPREG00000018395	ENSPREG00000018434	ENSPREG00000018603	ENSPREG00000018633	ENSPREG00000018668	ENSPREG00000018750	sbds (ENSPREG00000018758)
Platyfish	MODERN SPECIES	9	ENSXMAG00000004681	zgc:171927 (ENSXMAG00000004683)	rps3 (ENSXMAG00000004703)	KCTD14 (ENSXMAG00000027590)	ENSXMAG00000028328	INTS4 (ENSXMAG00000004746)	aamdc (ENSXMAG00000004784)	ENSXMAG00000022515	exosc5 (ENSXMAG00000004786)	ENSXMAG00000004802	ppp1r13l (ENSXMAG00000004805)	opa3 (ENSXMAG00000023043)	HNRNPUL1 (ENSXMAG00000004815)	rasgrp4 (ENSXMAG00000004851) #31	ENSXMAG00000004873 #29	ENSXMAG00000025496 #17	AXL (ENSXMAG00000005926)	ENSXMAG00000005995	ENSXMAG00000005997	ENSXMAG00000006030	ENSXMAG00000001172	tgfb1a (ENSXMAG00000001149)	ppp5c (ENSXMAG00000006032)	ENSXMAG00000025076	ENSXMAG00000006059	ENSXMAG00000026025	ENSXMAG00000019836	cldnf (ENSXMAG00000024257)	cldnj (ENSXMAG00000023592)	sbds (ENSXMAG00000006065)	ENSXMAG00000019840
NAME_4	ANCESTRAL SPECIES	85	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT01090000261501	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000163648.a.a.a.a	ENSGT00940000154762.a.a	ENSGT00940000164025.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000164025.b.a	ENSGT00390000007499
Mummichog	MODERN SPECIES	2301	ENSFHEG00000022187	zgc:171927 (ENSFHEG00000022176)	RPS3 (ENSFHEG00000022153)	KCTD14 (ENSFHEG00000022125)	ENSFHEG00000022108	INTS4 (ENSFHEG00000022099)	ENSFHEG00000021974	aamdc (ENSFHEG00000021961)	exosc5 (ENSFHEG00000021919)	ENSFHEG00000021890	ppp1r13l (ENSFHEG00000021875)	opa3 (ENSFHEG00000021858)	ENSFHEG00000021851	rasgrp4 (ENSFHEG00000021830) #31	ENSFHEG00000021738 #29	LGALS4 (ENSFHEG00000021433) #17	AXL (ENSFHEG00000021376)	ENSFHEG00000021322	cyp2y3 (ENSFHEG00000021314)	ENSFHEG00000021303	tgfb1a (ENSFHEG00000021271)	ppp5c (ENSFHEG00000021258)	ENSFHEG00000021193	ENSFHEG00000021189	cldn3d (ENSFHEG00000021181)	ENSFHEG00000021176	ENSFHEG00000021019	cldnf (ENSFHEG00000020992)	ENSFHEG00000020910	ENSFHEG00000020885	sbds (ENSFHEG00000000708)
Sheepshead minnow	MODERN SPECIES	457	rps3 (ENSCVAG00000009247)	KCTD14 (ENSCVAG00000009254)	ENSCVAG00000009262	INTS4 (ENSCVAG00000009362)	aamdc (ENSCVAG00000009374)	exosc5 (ENSCVAG00000009396)	ENSCVAG00000009406	ppp1r13l (ENSCVAG00000009418)	opa3 (ENSCVAG00000009429)	ENSCVAG00000009437	ENSCVAG00000009445	ENSCVAG00000009448	HNRNPUL1 (ENSCVAG00000009524)	rasgrp4 (ENSCVAG00000009549) #31	ENSCVAG00000009615 #29	ENSCVAG00000009653 #17	ENSCVAG00000009664	AXL (ENSCVAG00000009671)	ENSCVAG00000009687	ENSCVAG00000009694	ENSCVAG00000009931
Aplocheiloidei	ANCESTRAL SPECIES	82	ENSGT00530000064359.c.a.n.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000165067	ENSGT00940000154762.a.b.a.b.a	ENSGT00940000165704.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00390000007499
Mangrove rivulus	MODERN SPECIES	146	ENSKMAG00000009910	ENSKMAG00000009884	zgc:171927 (ENSKMAG00000009856)	rps3 (ENSKMAG00000009747)	KCTD14 (ENSKMAG00000009691)	ENSKMAG00000009674	INTS4 (ENSKMAG00000009623)	aamdc (ENSKMAG00000009579)	exosc5 (ENSKMAG00000009517)	TMEM91 (ENSKMAG00000009497)	ppp1r13l (ENSKMAG00000009480)	opa3 (ENSKMAG00000009466)	HNRNPUL1 (ENSKMAG00000009438)	rasgrp4 (ENSKMAG00000009408) #31	ENSKMAG00000009149 #29	ENSKMAG00000009102 #17	AXL (ENSKMAG00000008992)	ENSKMAG00000008954	cyp2y3 (ENSKMAG00000008879)	ENSKMAG00000008845
Turquoise killifish	MODERN SPECIES	1615	ENSNFUG00015015752	ENSNFUG00015015740	ENSNFUG00015015735	ENSNFUG00015015718	RPS3 (ENSNFUG00015015649)	KCTD14 (ENSNFUG00015015594)	INTS4 (ENSNFUG00015015090)	AAMDC (ENSNFUG00015015062)	exosc5 (ENSNFUG00015014923)	TMEM91 (ENSNFUG00015014778)	ppp1r13l (ENSNFUG00015014641)	ENSNFUG00015014620	OPA3 (ENSNFUG00015014603)	HNRNPUL1 (ENSNFUG00015013709)	rasgrp4 (ENSNFUG00015013477) #31	LGALS4 (ENSNFUG00015011928) #17	AXL (ENSNFUG00015011765)	ENSNFUG00015011736	cyp2y3 (ENSNFUG00015011488)	ENSNFUG00015011346	tgfb1a (ENSNFUG00015011121)	ppp5c (ENSNFUG00015010981)	ENSNFUG00015010964	CR382327.1 (ENSNFUG00015010958)	ENSNFUG00015010954	ENSNFUG00015010950	CLDN4 (ENSNFUG00015010942)	ENSNFUG00015010936	cldna (ENSNFUG00015010931)	cldnj (ENSNFUG00015010925)	ENSNFUG00015010918
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000157969	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b
Pomacentridae	ANCESTRAL SPECIES	27	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00970000193390.c.a.b.v	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b
Pomacentridae_A	ANCESTRAL SPECIES	32	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00970000193390.c.a.b.v	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000162064.h	ENSGT00940000162064.i	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.a.b	ENSGT00940000164025.b.a
Amphiprion	ANCESTRAL SPECIES	30	ENSGT00390000015063	ENSGT00940000177932	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00970000193390.c.a.b.v	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000162064.h	ENSGT00940000162064.i.b	ENSGT00940000162064.i.a.a	ENSGT00940000162064.i.a.b	ENSGT00940000166615	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000162095	ENSGT00940000154762.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000154762.a.b.a.b.b
Clown anemonefish	MODERN SPECIES	1841	nup88 (ENSAOCG00000006396)	ENSAOCG00000006412	EHD2 (ENSAOCG00000006422)	ENSAOCG00000000307	napab (ENSAOCG00000006508)	B3GNT8 (ENSAOCG00000006529)	bckdha (ENSAOCG00000006566)	ENSAOCG00000006582	exosc5 (ENSAOCG00000006601)	TMEM91 (ENSAOCG00000006610)	ppp1r13l (ENSAOCG00000006665)	opa3 (ENSAOCG00000006679)	HNRNPUL1 (ENSAOCG00000006694)	rasgrp4 (ENSAOCG00000006740) #31	ENSAOCG00000007025 #29	LGALS4 (ENSAOCG00000007089) #17	AXL (ENSAOCG00000007215)
Orange clownfish	MODERN SPECIES	23	nup88 (ENSAPEG00000013914)	ENSAPEG00000013936	EHD2 (ENSAPEG00000013956)	BICRA (ENSAPEG00000013986)	napab (ENSAPEG00000014073)	B3GNT8 (ENSAPEG00000014130)	bckdha (ENSAPEG00000014162)	ENSAPEG00000014191	exosc5 (ENSAPEG00000014199)	TMEM91 (ENSAPEG00000014223)	ppp1r13l (ENSAPEG00000014243)	opa3 (ENSAPEG00000014280)	HNRNPUL1 (ENSAPEG00000014298)	rasgrp4 (ENSAPEG00000014327) #31	ENSAPEG00000014396 #29	ENSAPEG00000014730 #17	AXL (ENSAPEG00000014797)	ENSAPEG00000014992	ENSAPEG00000015185	ENSAPEG00000015200	ENSAPEG00000015215	ENSAPEG00000015235	ENSAPEG00000015259	tgfb1a (ENSAPEG00000015272)	ppp5c (ENSAPEG00000015286)	ENSAPEG00000015357	GCGR (ENSAPEG00000015368)	ENSAPEG00000015418	ENSAPEG00000015528	ENSAPEG00000015596	ENSAPEG00000015744
Spiny chromis	MODERN SPECIES	569	psmd8 (ENSAPOG00000012663) #35	nup88 (ENSAPOG00000012689)	EHD2 (ENSAPOG00000012705)	BICRA (ENSAPOG00000012729)	napab (ENSAPOG00000012794)	B3GNT8 (ENSAPOG00000012811)	bckdha (ENSAPOG00000012827)	ENSAPOG00000012842	exosc5 (ENSAPOG00000012910)	TMEM91 (ENSAPOG00000012932)	ppp1r13l (ENSAPOG00000012949)	opa3 (ENSAPOG00000012955)	HNRNPUL1 (ENSAPOG00000013078)	rasgrp4 (ENSAPOG00000013216) #31	ENSAPOG00000013635 #29	LGALS4 (ENSAPOG00000013714) #17	AXL (ENSAPOG00000013901)	cyp2y3 (ENSAPOG00000013952)	ENSAPOG00000013970	tgfb1a (ENSAPOG00000013984)	ppp5c (ENSAPOG00000014039)	ENSAPOG00000014071	GCGR (ENSAPOG00000014092)	ENSAPOG00000014116	ENSAPOG00000014124	cldna (ENSAPOG00000014139)	ENSAPOG00000014161	cldnf (ENSAPOG00000014179)	ENSAPOG00000014192	ENSAPOG00000014212	cldnj (ENSAPOG00000014230)
Bicolor damselfish	MODERN SPECIES	1421	psmd8 (ENSSPAG00000018132) #35	nup88 (ENSSPAG00000018157)	EHD2 (ENSSPAG00000018164)	BICRA (ENSSPAG00000018186)	napab (ENSSPAG00000018226)	B3GNT8 (ENSSPAG00000018266)	bckdha (ENSSPAG00000018282)	ENSSPAG00000018298	exosc5 (ENSSPAG00000018306)	TMEM91 (ENSSPAG00000018333)	ppp1r13l (ENSSPAG00000018345)	opa3 (ENSSPAG00000018371)	HNRNPUL1 (ENSSPAG00000018378)	rasgrp4 (ENSSPAG00000018422) #31	ENSSPAG00000018470 #29	LGALS4 (ENSSPAG00000018677) #17
Cichlidae	ANCESTRAL SPECIES	21	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378 #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000162064.h.d	ENSGT00940000162064.h.c	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000157969	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.b.b
Midas cichlid	MODERN SPECIES	97	spred3 (ENSACIG00000024042) #33	ENSACIG00000024043 #33	psmd8 (ENSACIG00000024049) #35	nup88 (ENSACIG00000024055)	ENSACIG00000024056	napab (ENSACIG00000024062)	B3GNT8 (ENSACIG00000024063)	bckdha (ENSACIG00000024066)	exosc5 (ENSACIG00000024067)	TMEM91 (ENSACIG00000024068)	ppp1r13l (ENSACIG00000024070)	opa3 (ENSACIG00000024071)	HNRNPUL1 (ENSACIG00000024072)	rasgrp4 (ENSACIG00000024073) #31	ENSACIG00000024074 #29	LGALS4 (ENSACIG00000024079) #17	AXL (ENSACIG00000024084)	ENSACIG00000024090	ENSACIG00000024091	ENSACIG00000024093	eif2a (ENSACIG00000024095)	zgc:92744 (ENSACIG00000024096)	mmp23bb (ENSACIG00000024098)	ENSACIG00000024099	ENSACIG00000024100
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES	19	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.b.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	15	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.a.a.b	ENSGT00940000154762.a.b.a.b.b
Haplochromini	ANCESTRAL SPECIES	15	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000160378.gb.a.b #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b
Haplochromini_A	ANCESTRAL SPECIES	23	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000156258.f.a.a.b	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.a.a.b
Haplochromini_B	ANCESTRAL SPECIES	27	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000156258.f.a.a.b.a	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000166615	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.a.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000165067
Zebra mbuna	MODERN SPECIES	1096	spred3 (ENSMZEG00005024156) #33	psmd8 (ENSMZEG00005024159) #35	nup88 (ENSMZEG00005024160)	EHD2 (ENSMZEG00005024162)	BICRA (ENSMZEG00005024164)	napab (ENSMZEG00005024179)	bckdha (ENSMZEG00005024188)	B3GNT8 (ENSMZEG00005024195)	exosc5 (ENSMZEG00005024196)	ENSMZEG00005024198	ppp1r13l (ENSMZEG00005024199)	opa3 (ENSMZEG00005024204)	HNRNPUL1 (ENSMZEG00005024205)	rasgrp4 (ENSMZEG00005024210) #31	ENSMZEG00005024215 #29	LGALS4 (ENSMZEG00005024224) #17	ENSMZEG00005024226 #17	ENSMZEG00005024228	ENSMZEG00005024229 #17	ENSMZEG00005024230 #17	ENSMZEG00005024232	AXL (ENSMZEG00005024245)	ENSMZEG00005024246	ENSMZEG00005024255	ENSMZEG00005024258	ENSMZEG00005024260	ENSMZEG00005024264	ENSMZEG00005024266	ENSMZEG00005024268	ENSMZEG00005024271	ENSMZEG00005024276
Eastern happy	MODERN SPECIES	5	spred3 (ENSACLG00000021780) #33	psmd8 (ENSACLG00000021751) #35	nup88 (ENSACLG00000021737)	EHD2 (ENSACLG00000021088)	napab (ENSACLG00000021009)	B3GNT8 (ENSACLG00000020997)	bckdha (ENSACLG00000020972)	exosc5 (ENSACLG00000020944)	TMEM91 (ENSACLG00000020929)	ppp1r13l (ENSACLG00000020908)	opa3 (ENSACLG00000020892)	ENSACLG00000020884	ENSACLG00000020855	rasgrp4 (ENSACLG00000020809) #31	ENSACLG00000020521 #29	ENSACLG00000020475 #17	LGALS4 (ENSACLG00000020454) #17	ENSACLG00000020425	ENSACLG00000020401	ENSACLG00000020383 #17	ENSACLG00000020150	AXL (ENSACLG00000020116)	ENSACLG00000019915	ENSACLG00000019722	ENSACLG00000019671	ENSACLG00000019572	ENSACLG00000019547	ENSACLG00000019308	ENSACLG00000019211	tgfb1a (ENSACLG00000019195)	ppp5c (ENSACLG00000019133)
P. nyererei	MODERN SPECIES	361	spred3 (ENSPNYG00000007926) #33	psmd8 (ENSPNYG00000007904) #35	nup88 (ENSPNYG00000007880)	EHD2 (ENSPNYG00000007864)	ENSPNYG00000007831	napab (ENSPNYG00000007787)	B3GNT8 (ENSPNYG00000007778)	bckdha (ENSPNYG00000007750)	exosc5 (ENSPNYG00000007712)	TMEM91 (ENSPNYG00000007696)	ppp1r13l (ENSPNYG00000007676)	opa3 (ENSPNYG00000007667)	HNRNPUL1 (ENSPNYG00000007583)	rasgrp4 (ENSPNYG00000007543) #31	ENSPNYG00000007262 #29	LGALS4 (ENSPNYG00000007170) #17	ENSPNYG00000007136 #17
Lyretail cichlid	MODERN SPECIES	335	dhx34 (ENSNBRG00000003884)	spred3 (ENSNBRG00000003936) #33	psmd8 (ENSNBRG00000003976) #35	nup88 (ENSNBRG00000004006)	ENSNBRG00000004028	napab (ENSNBRG00000004132)	B3GNT8 (ENSNBRG00000004296)	bckdha (ENSNBRG00000004310)	exosc5 (ENSNBRG00000004340)	TMEM91 (ENSNBRG00000004361)	ppp1r13l (ENSNBRG00000004377)	opa3 (ENSNBRG00000004385)	HNRNPUL1 (ENSNBRG00000004398)	rasgrp4 (ENSNBRG00000004468) #31	ENSNBRG00000004596 #29	ENSNBRG00000004928 #17	LGALS4 (ENSNBRG00000004989) #17	ENSNBRG00000005312
Nile tilapia	MODERN SPECIES	5	ENSONIG00000004063 #33	psmd8 (ENSONIG00000004059) #35	nup88 (ENSONIG00000021321)	EHD2 (ENSONIG00000004051)	ENSONIG00000004046	napab (ENSONIG00000004037)	B3GNT8 (ENSONIG00000004036)	bckdha (ENSONIG00000004030)	exosc5 (ENSONIG00000037177)	TMEM91 (ENSONIG00000004015)	ppp1r13l (ENSONIG00000004011)	opa3 (ENSONIG00000004009)	HNRNPUL1 (ENSONIG00000004004)	rasgrp4 (ENSONIG00000003995) #31	ryr1b (ENSONIG00000003892) #29	LGALS4 (ENSONIG00000003890) #17	ENSONIG00000034241 #17	AXL (ENSONIG00000003873)	ENSONIG00000003847	ENSONIG00000003852	ENSONIG00000037244	ENSONIG00000005902	ENSONIG00000037200	ENSONIG00000037455	ENSONIG00000042732	ENSONIG00000037837	ENSONIG00000005899	ENSONIG00000005892	tgfb1a (ENSONIG00000005890)	ppp5c (ENSONIG00000005880)	ENSONIG00000040811
Pseudocrenilabrinae	ANCESTRAL SPECIES	19	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000165704.b.b	ENSGT00940000164025.a.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	15	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.a.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000165067
Lyretail cichlid	MODERN SPECIES	335	spred3 (ENSNBRG00000003936) #33	psmd8 (ENSNBRG00000003976) #35	nup88 (ENSNBRG00000004006)	ENSNBRG00000004028	napab (ENSNBRG00000004132)	B3GNT8 (ENSNBRG00000004296)	bckdha (ENSNBRG00000004310)	exosc5 (ENSNBRG00000004340)	TMEM91 (ENSNBRG00000004361)	ppp1r13l (ENSNBRG00000004377)	opa3 (ENSNBRG00000004385)	HNRNPUL1 (ENSNBRG00000004398)	rasgrp4 (ENSNBRG00000004468) #31	ENSNBRG00000004596 #29	ENSNBRG00000004928 #17	LGALS4 (ENSNBRG00000004989) #17	ENSNBRG00000005312
Haplochromini	DUPLICATION
Haplochromini	DUPLICATION
Haplochromini	ANCESTRAL SPECIES	15	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000160378.gb.a.b #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000164025.a.a.b
Haplochromini_A	ANCESTRAL SPECIES	23	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000156258.f.a.a.b	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.a.a.b	ENSGT00940000154762.a.b.a.b.b
P. nyererei	MODERN SPECIES	361	psmd8 (ENSPNYG00000007904) #35	nup88 (ENSPNYG00000007880)	EHD2 (ENSPNYG00000007864)	ENSPNYG00000007831	napab (ENSPNYG00000007787)	B3GNT8 (ENSPNYG00000007778)	bckdha (ENSPNYG00000007750)	exosc5 (ENSPNYG00000007712)	TMEM91 (ENSPNYG00000007696)	ppp1r13l (ENSPNYG00000007676)	opa3 (ENSPNYG00000007667)	HNRNPUL1 (ENSPNYG00000007583)	rasgrp4 (ENSPNYG00000007543) #31	ENSPNYG00000007262 #29	LGALS4 (ENSPNYG00000007170) #17	ENSPNYG00000007136 #17
Haplochromini_B	ANCESTRAL SPECIES	27	ENSGT00390000014682 #35	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000156258.f.a.a.b.a	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000166615	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000164025.a.a.b	ENSGT00940000154762.a.b.a.b.b	ENSGT00940000165067	ENSGT00390000007499
Zebra mbuna	MODERN SPECIES	1096	EHD2 (ENSMZEG00005024162)	BICRA (ENSMZEG00005024164)	napab (ENSMZEG00005024179)	bckdha (ENSMZEG00005024188)	B3GNT8 (ENSMZEG00005024195)	exosc5 (ENSMZEG00005024196)	ENSMZEG00005024198	ppp1r13l (ENSMZEG00005024199)	opa3 (ENSMZEG00005024204)	HNRNPUL1 (ENSMZEG00005024205)	rasgrp4 (ENSMZEG00005024210) #31	ENSMZEG00005024215 #29	LGALS4 (ENSMZEG00005024224) #17	ENSMZEG00005024226 #17	ENSMZEG00005024228	ENSMZEG00005024229 #17	ENSMZEG00005024230 #17	ENSMZEG00005024232	AXL (ENSMZEG00005024245)	ENSMZEG00005024246	ENSMZEG00005024255	ENSMZEG00005024258	ENSMZEG00005024260	ENSMZEG00005024264	ENSMZEG00005024266	ENSMZEG00005024268	ENSMZEG00005024271	ENSMZEG00005024276	tgfb1a (ENSMZEG00005024278)	ppp5c (ENSMZEG00005024280)	ENSMZEG00005024285
Eastern happy	MODERN SPECIES	5	psmd8 (ENSACLG00000021751) #35	nup88 (ENSACLG00000021737)	EHD2 (ENSACLG00000021088)	napab (ENSACLG00000021009)	B3GNT8 (ENSACLG00000020997)	bckdha (ENSACLG00000020972)	exosc5 (ENSACLG00000020944)	TMEM91 (ENSACLG00000020929)	ppp1r13l (ENSACLG00000020908)	opa3 (ENSACLG00000020892)	ENSACLG00000020884	ENSACLG00000020855	rasgrp4 (ENSACLG00000020809) #31	ENSACLG00000020521 #29	ENSACLG00000020475 #17	LGALS4 (ENSACLG00000020454) #17	ENSACLG00000020425	ENSACLG00000020401	ENSACLG00000020383 #17	ENSACLG00000020150	AXL (ENSACLG00000020116)	ENSACLG00000019915	ENSACLG00000019722	ENSACLG00000019671	ENSACLG00000019572	ENSACLG00000019547	ENSACLG00000019308	ENSACLG00000019211	tgfb1a (ENSACLG00000019195)	ppp5c (ENSACLG00000019133)	ENSACLG00000019116
Burton s mouthbrooder	MODERN SPECIES	1872																LGALS4 (ENSHBUG00000022936) #17
Haplochromini	ANCESTRAL SPECIES	15	ENSGT00390000015063	ENSGT00940000159256.p	ENSGT00940000159112.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.fb #17	ENSGT00940000160378.gb.a.a #17	ENSGT00940000160378.gb.a.b #17	ENSGT00940000160232	ENSGT00940000162064.h.d.a	ENSGT00940000162064.h.d.b	ENSGT00940000162064.h.c.b	ENSGT00940000162064.i	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000163335	ENSGT00940000163648.a.a.a.b	ENSGT00940000154762.a.a	ENSGT00940000154762.a.b.a.a.a.a	ENSGT00940000163648.a.a.b	ENSGT00940000164025.a.a.b	ENSGT00940000154762.a.b.a.b.b
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00940000160378.gb.a.b #17
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00940000160378.gb.a.b #17
Zebra mbuna	MODERN SPECIES	1096	BICRA (ENSMZEG00005024164)	napab (ENSMZEG00005024179)	bckdha (ENSMZEG00005024188)	B3GNT8 (ENSMZEG00005024195)	exosc5 (ENSMZEG00005024196)	ENSMZEG00005024198	ppp1r13l (ENSMZEG00005024199)	opa3 (ENSMZEG00005024204)	HNRNPUL1 (ENSMZEG00005024205)	rasgrp4 (ENSMZEG00005024210) #31	ENSMZEG00005024215 #29	LGALS4 (ENSMZEG00005024224) #17	ENSMZEG00005024226 #17	ENSMZEG00005024228	ENSMZEG00005024229 #17	ENSMZEG00005024230 #17	ENSMZEG00005024232	AXL (ENSMZEG00005024245)	ENSMZEG00005024246	ENSMZEG00005024255	ENSMZEG00005024258	ENSMZEG00005024260	ENSMZEG00005024264	ENSMZEG00005024266	ENSMZEG00005024268	ENSMZEG00005024271	ENSMZEG00005024276	tgfb1a (ENSMZEG00005024278)	ppp5c (ENSMZEG00005024280)	ENSMZEG00005024285	GCGR (ENSMZEG00005024287)
Eastern happy	MODERN SPECIES	5	napab (ENSACLG00000021009)	B3GNT8 (ENSACLG00000020997)	bckdha (ENSACLG00000020972)	exosc5 (ENSACLG00000020944)	TMEM91 (ENSACLG00000020929)	ppp1r13l (ENSACLG00000020908)	opa3 (ENSACLG00000020892)	ENSACLG00000020884	ENSACLG00000020855	rasgrp4 (ENSACLG00000020809) #31	ENSACLG00000020521 #29	ENSACLG00000020475 #17	LGALS4 (ENSACLG00000020454) #17	ENSACLG00000020425	ENSACLG00000020401	ENSACLG00000020383 #17	ENSACLG00000020150	AXL (ENSACLG00000020116)	ENSACLG00000019915	ENSACLG00000019722	ENSACLG00000019671	ENSACLG00000019572	ENSACLG00000019547	ENSACLG00000019308	ENSACLG00000019211	tgfb1a (ENSACLG00000019195)	ppp5c (ENSACLG00000019133)	ENSACLG00000019116	GCGR (ENSACLG00000018929)	ENSACLG00000018917	ENSACLG00000018908
Haplochromini	ANCESTRAL SPECIES																	ENSGT00940000160378.gb.b #17
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00940000160378.gb.b #17
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00940000160378.gb.b #17
Zebra mbuna	MODERN SPECIES	1096	psmd8 (ENSMZEG00005024159) #35	nup88 (ENSMZEG00005024160)	EHD2 (ENSMZEG00005024162)	BICRA (ENSMZEG00005024164)	napab (ENSMZEG00005024179)	bckdha (ENSMZEG00005024188)	B3GNT8 (ENSMZEG00005024195)	exosc5 (ENSMZEG00005024196)	ENSMZEG00005024198	ppp1r13l (ENSMZEG00005024199)	opa3 (ENSMZEG00005024204)	HNRNPUL1 (ENSMZEG00005024205)	rasgrp4 (ENSMZEG00005024210) #31	ENSMZEG00005024215 #29	LGALS4 (ENSMZEG00005024224) #17	ENSMZEG00005024226 #17	ENSMZEG00005024228	ENSMZEG00005024229 #17	ENSMZEG00005024230 #17	ENSMZEG00005024232	AXL (ENSMZEG00005024245)	ENSMZEG00005024246	ENSMZEG00005024255	ENSMZEG00005024258	ENSMZEG00005024260	ENSMZEG00005024264	ENSMZEG00005024266	ENSMZEG00005024268	ENSMZEG00005024271	ENSMZEG00005024276	tgfb1a (ENSMZEG00005024278)
Nile tilapia	MODERN SPECIES	5	psmd8 (ENSONIG00000004059) #35	nup88 (ENSONIG00000021321)	EHD2 (ENSONIG00000004051)	ENSONIG00000004046	napab (ENSONIG00000004037)	B3GNT8 (ENSONIG00000004036)	bckdha (ENSONIG00000004030)	exosc5 (ENSONIG00000037177)	TMEM91 (ENSONIG00000004015)	ppp1r13l (ENSONIG00000004011)	opa3 (ENSONIG00000004009)	HNRNPUL1 (ENSONIG00000004004)	rasgrp4 (ENSONIG00000003995) #31	ryr1b (ENSONIG00000003892) #29	LGALS4 (ENSONIG00000003890) #17	ENSONIG00000034241 #17	AXL (ENSONIG00000003873)	ENSONIG00000003847	ENSONIG00000003852	ENSONIG00000037244	ENSONIG00000005902	ENSONIG00000037200	ENSONIG00000037455	ENSONIG00000042732	ENSONIG00000037837	ENSONIG00000005899	ENSONIG00000005892	tgfb1a (ENSONIG00000005890)	ppp5c (ENSONIG00000005880)	ENSONIG00000040811	GCGR (ENSONIG00000031034)
Pinecone sodierfish	MODERN SPECIES	4	psmd8 (ENSMMDG00005006562) #35	nup88 (ENSMMDG00005006565)	EHD2 (ENSMMDG00005006568)	BICRA (ENSMMDG00005006573)	napab (ENSMMDG00005006579)	B3GNT8 (ENSMMDG00005006596)	bckdha (ENSMMDG00005006599)	exosc5 (ENSMMDG00005006601)	TMEM91 (ENSMMDG00005006603)	ppp1r13l (ENSMMDG00005006609)	opa3 (ENSMMDG00005006613)	HNRNPUL1 (ENSMMDG00005006672)	rasgrp4 (ENSMMDG00005009596) #31	ENSMMDG00005009610	ENSMMDG00005009643 #29	LGALS4 (ENSMMDG00005009703) #17	AXL (ENSMMDG00005009710)	ENSMMDG00005009735	ENSMMDG00005010323	ENSMMDG00005011279	ENSMMDG00005012656	tgfb1a (ENSMMDG00005012749)	ppp5c (ENSMMDG00005012754)	ENSMMDG00005012933	ENSMMDG00005012936	ENSMMDG00005012945	ENSMMDG00005012946	ENSMMDG00005012948	cldna (ENSMMDG00005012949)	CLDN4 (ENSMMDG00005012951)	cldnf (ENSMMDG00005012952)
Cod	MODERN SPECIES	7	ENSGMOG00000028221	ENSGMOG00000024524	ENSGMOG00000034898	ENSGMOG00000012926	spint2 (ENSGMOG00000036706)	ENSGMOG00000001924	ENSGMOG00000019726	supt5h (ENSGMOG00000003422)	rnaset2l (ENSGMOG00000036250)	cox7a1 (ENSGMOG00000009085)	ENSGMOG00000030573	ENSGMOG00000006969	ENSGMOG00000027136	ENSGMOG00000032440	ENSGMOG00000025997	ENSGMOG00000018528 #17	ENSGMOG00000018488	ENSGMOG00000018476	ENSGMOG00000026154	ENSGMOG00000018456	ENSGMOG00000018445	ENSGMOG00000018425	ENSGMOG00000018401	ENSGMOG00000018381	ENSGMOG00000024470	ENSGMOG00000020245	ENSGMOG00000020247	ENSGMOG00000028787	ENSGMOG00000020278	ENSGMOG00000020276	ENSGMOG00000034618
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	177											ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b #32	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378.hb #17	ENSGT00940000160378.ib #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b
Salmoninae	ANCESTRAL SPECIES	214	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00940000159256.p	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.pd.b.b #29	ENSGT00940000155288.b.qd #29	ENSGT00940000160378.hb #17	ENSGT00940000160378.ib #17	ENSGT00940000160232.l	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b.j	ENSGT00940000159077.j	ENSGT00940000159077.i	ENSGT00940000164824.B
Salmoninae_a	ANCESTRAL SPECIES	3	ENSGT00940000158721	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00940000159256.p.a	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.qd #29	ENSGT00940000160378.hb #17	ENSGT00940000160378.ib #17	ENSGT00940000160232.l	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT01070000254515	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b.j	ENSGT00940000159077.j	ENSGT00940000164824.B.c
Salmo	ANCESTRAL SPECIES	68	ENSGT00390000014682 #35	ENSGT00940000159256.p.a	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.qd #29	ENSGT00940000160378.ib #17	ENSGT00940000160232.l	ENSGT00940000160378.hb #17	ENSGT01050000245803	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT01070000254515	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT01050000244882.b.d	ENSGT00390000003444.e	ENSGT00940000154738.a.r.c.b	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b.j	ENSGT00940000159077.j
Atlantic salmon	MODERN SPECIES	28	EHD2 (ENSSSAG00000109961)	ENSSSAG00000050716	ENSSSAG00000017574	ENSSSAG00000052694	BICRA (ENSSSAG00000057848)	napab (ENSSSAG00000105124)	B3GNT8 (ENSSSAG00000093767)	bckdha (ENSSSAG00000088635)	exosc5 (ENSSSAG00000057868)	TMEM91 (ENSSSAG00000090827)	ppp1r13l (ENSSSAG00000107742)	opa3 (ENSSSAG00000085940)	ENSSSAG00000057300	rasgrp4 (ENSSSAG00000095450) #31	ENSSSAG00000053578 #29	ENSSSAG00000052663 #17	ENSSSAG00000099604 #17	ENSSSAG00000047172	ENSSSAG00000109438	ENSSSAG00000052699	ENSSSAG00000052708	ENSSSAG00000116391	ENSSSAG00000052752	ENSSSAG00000053048	ENSSSAG00000084162	wdr62 (ENSSSAG00000053100)	ENSSSAG00000086331	arrb1 (ENSSSAG00000046647)	ENSSSAG00000052600	ENSSSAG00000109808	ENSSSAG00000052615
River trout	MODERN SPECIES	4	EHD2 (ENSSTUG00000007038)	ENSSTUG00000007032	ENSSTUG00000007022	ENSSTUG00000007017	prdm10 (ENSSTUG00000006849)	ENSSTUG00000006835	ENSSTUG00000006826	napab (ENSSTUG00000006802)	B3GNT8 (ENSSTUG00000006787)	bckdha (ENSSTUG00000006753)	exosc5 (ENSSTUG00000006739)	TMEM91 (ENSSTUG00000006724)	ppp1r13l (ENSSTUG00000006711)	opa3 (ENSSTUG00000006694)	ENSSTUG00000006297	LGALS4 (ENSSTUG00000006201) #17	ENSSTUG00000006190	ENSSTUG00000006182	ENSSTUG00000006156	ENSSTUG00000006134	tgfb1a (ENSSTUG00000006122)	ENSSTUG00000006119	ppp5c (ENSSTUG00000005590)	ENSSTUG00000005561	wdr62 (ENSSTUG00000005228)	ENSSTUG00000005156	arrb1 (ENSSTUG00000004782)	ENSSTUG00000004748	ENSSTUG00000004743	cldn8.3 (ENSSTUG00000004735)	cldn8.2 (ENSSTUG00000004726)
Oncorhynchus	ANCESTRAL SPECIES	69	ENSGT00940000158721	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00940000159256.p.a	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b.f	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.pd.b.b #29	ENSGT00940000160378.hb #17	ENSGT01050000245803.a	ENSGT00940000166615	ENSGT00940000160457.b	ENSGT01070000254515	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT00940000159077.j	ENSGT00940000159077.i.d	ENSGT00940000156294.c.b.d.a.a	ENSGT00940000156294.c.b.d.a.b	ENSGT00940000159077.i.c
Rainbow trout	MODERN SPECIES	16	napab (ENSOMYG00000069694)	ENSOMYG00000068828	ENSOMYG00000064314	bckdha (ENSOMYG00000036445)	exosc5 (ENSOMYG00000036460)	TMEM91 (ENSOMYG00000036471)	ppp1r13l (ENSOMYG00000062583)	ENSOMYG00000073530	opa3 (ENSOMYG00000036343)	ENSOMYG00000036320	rasgrp4 (ENSOMYG00000073518) #31	ENSOMYG00000074863	ENSOMYG00000054000 #29	ENSOMYG00000068405	ENSOMYG00000062986	ENSOMYG00000018423 #17	ENSOMYG00000053393	ENSOMYG00000068625	ENSOMYG00000057444	ENSOMYG00000018317	ENSOMYG00000066637	ENSOMYG00000018332	ENSOMYG00000018366	wdr62 (ENSOMYG00000055450)	ENSOMYG00000065592	ENSOMYG00000057390	ENSOMYG00000072339	ENSOMYG00000054394	ENSOMYG00000074571	arrb1 (ENSOMYG00000018272)	or55a2 (ENSOMYG00000018290)
Oncorhynchus_a	ANCESTRAL SPECIES	913																ENSGT00940000160378.hb #17	ENSGT01050000245803.a
Coho salmon	MODERN SPECIES	9	spred3 (ENSOKIG00005032025) #33	psmd8 (ENSOKIG00005032046) #35	EHD2 (ENSOKIG00005032063)	BICRA (ENSOKIG00005032087)	bckdha (ENSOKIG00005032122)	napab (ENSOKIG00005032183)	ENSOKIG00005032287	ENSOKIG00005032294	ENSOKIG00005032309	ppp1r13l (ENSOKIG00005032325)	opa3 (ENSOKIG00005032339)	ENSOKIG00005032388	rasgrp4 (ENSOKIG00005033258) #31	ENSOKIG00005033337 #29	ENSOKIG00005033426	LGALS4 (ENSOKIG00005010842) #17	ENSOKIG00005010868	AXL (ENSOKIG00005010973)	ENSOKIG00005012757	TGFB1 (ENSOKIG00005012766)	ppp5c (ENSOKIG00005012836)	ENSOKIG00005013510	wdr62 (ENSOKIG00005013538)	ENSOKIG00005013701	ENSOKIG00005013728	arrb1 (ENSOKIG00005013801)	ENSOKIG00005014847	ENSOKIG00005014851	cldn8.3 (ENSOKIG00005014860)	CLDN8 (ENSOKIG00005014863)	ENSOKIG00005014880
Huchen	MODERN SPECIES	3438																ENSHHUG00000007488 #17
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES		dhx34 (ENSELUG00000021992)	spred3 (ENSELUG00000021913) #33	psmd8 (ENSELUG00000021887) #35	EHD2 (ENSELUG00000021876)	BICRA (ENSELUG00000021865)	napab (ENSELUG00000021793)	B3GNT8 (ENSELUG00000021747)	bckdha (ENSELUG00000021736)	exosc5 (ENSELUG00000021719)	TMEM91 (ENSELUG00000021703)	ppp1r13l (ENSELUG00000021688)	opa3 (ENSELUG00000021676)	HNRNPUL1 (ENSELUG00000021668)	rasgrp4 (ENSELUG00000021643) #31	ryr1b (ENSELUG00000021513) #29	LGALS4 (ENSELUG00000021363) #17	ENSELUG00000021319 #17	LGALS4 (ENSELUG00000021308) #17	ENSELUG00000021295	ENSELUG00000021283	ENSELUG00000021278	tgfb1a (ENSELUG00000021267)	ppp5c (ENSELUG00000021250)	ENSELUG00000029315	wdr62 (ENSELUG00000021201)	ENSELUG00000032110	ENSELUG00000021133	arrb1 (ENSELUG00000021080)	ENSELUG00000021046	tmem97 (ENSELUG00000021022)	ENSELUG00000021006
Northern pike	MODERN SPECIES		psmd8 (ENSELUG00000021887) #35	EHD2 (ENSELUG00000021876)	BICRA (ENSELUG00000021865)	napab (ENSELUG00000021793)	B3GNT8 (ENSELUG00000021747)	bckdha (ENSELUG00000021736)	exosc5 (ENSELUG00000021719)	TMEM91 (ENSELUG00000021703)	ppp1r13l (ENSELUG00000021688)	opa3 (ENSELUG00000021676)	HNRNPUL1 (ENSELUG00000021668)	rasgrp4 (ENSELUG00000021643) #31	ryr1b (ENSELUG00000021513) #29	LGALS4 (ENSELUG00000021363) #17	ENSELUG00000021319 #17	LGALS4 (ENSELUG00000021308) #17	ENSELUG00000021295	ENSELUG00000021283	ENSELUG00000021278	tgfb1a (ENSELUG00000021267)	ppp5c (ENSELUG00000021250)	ENSELUG00000029315	wdr62 (ENSELUG00000021201)	ENSELUG00000032110	ENSELUG00000021133	arrb1 (ENSELUG00000021080)	ENSELUG00000021046	tmem97 (ENSELUG00000021022)	ENSELUG00000021006	ENSELUG00000020950	urb1 (ENSELUG00000020516)
Protacanthopterygii	ANCESTRAL SPECIES	177										ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b #32	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378.hb #17	ENSGT00940000160378.ib #17	ENSGT00940000160232	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785	ENSGT00940000181859	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b
Salmoninae	ANCESTRAL SPECIES	214	ENSGT00390000014682 #35	ENSGT00940000159256.p	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.pd.b.b #29	ENSGT00940000155288.b.qd #29	ENSGT00940000160378.hb #17	ENSGT00940000160378.ib #17	ENSGT00940000160232.l	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b.j	ENSGT00940000159077.j	ENSGT00940000159077.i	ENSGT00940000164824.B	ENSGT00940000156294.c.b.c
Huchen	MODERN SPECIES	9214															ENSHHUG00000006808	ENSHHUG00000006807 #17
Salmoninae_a	ANCESTRAL SPECIES	3	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00940000159256.p.a	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.qd #29	ENSGT00940000160378.hb #17	ENSGT00940000160378.ib #17	ENSGT00940000160232.l	ENSGT00940000174794	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT01070000254515	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a	ENSGT01030000234640.b.j	ENSGT00940000159077.j	ENSGT00940000164824.B.c	ENSGT00940000156294.c.b.c
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000160378.ib #17
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000160378.ib #17
Chinook salmon	MODERN SPECIES	10	ric8b (ENSOTSG00005040062)	ENSOTSG00005040061	endouc (ENSOTSG00005040060)	ENSOTSG00005040059	ppfibp1b (ENSOTSG00005037922)	si:ch211-245j22.3 (ENSOTSG00005037885)	arntl2 (ENSOTSG00005037846)	slc17a8 (ENSOTSG00005037838)	nr1h4 (ENSOTSG00005037348)	ENSOTSG00005037333	ENSOTSG00005037329	nudt4a (ENSOTSG00005037325)	EEA1 (ENSOTSG00005035523)	plekhg7 (ENSOTSG00005035500)	ITPR2 (ENSOTSG00005035497)	ENSOTSG00005035490 #17	sspn (ENSOTSG00005035489)	bhlhe41 (ENSOTSG00005035488)	RASSF8 (ENSOTSG00005035486)	ENSOTSG00005035433	ENSOTSG00005035421	ENSOTSG00005035410	banp (ENSOTSG00005035406)	ENSOTSG00005035392	FBXO31 (ENSOTSG00005034959)	fanci (ENSOTSG00005034930)	RHCG (ENSOTSG00005034658)	ENSOTSG00005034655	ENSOTSG00005034652	ENSOTSG00005034649	ENSOTSG00005034648
Salmo	ANCESTRAL SPECIES	68	ENSGT00940000158721	ENSGT00940000161445 #33	ENSGT00390000014682 #35	ENSGT00940000159256.p.a	ENSGT00940000159112.b.j	ENSGT00390000005826.a.a.v	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b.qd #29	ENSGT00940000160378.ib #17	ENSGT00940000160232.l	ENSGT00940000160378.hb #17	ENSGT01050000245803	ENSGT00940000159132.b	ENSGT00940000160457.b	ENSGT01070000254515	ENSGT00940000158785.q	ENSGT00940000164630.f	ENSGT01050000244882.b.d	ENSGT00390000003444.e	ENSGT00940000154738.a.r.c.b	ENSGT00940000165793	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT01100000263522.B.a
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000050716	ENSSSAG00000017574	ENSSSAG00000052694	BICRA (ENSSSAG00000057848)	napab (ENSSSAG00000105124)	B3GNT8 (ENSSSAG00000093767)	bckdha (ENSSSAG00000088635)	exosc5 (ENSSSAG00000057868)	TMEM91 (ENSSSAG00000090827)	ppp1r13l (ENSSSAG00000107742)	opa3 (ENSSSAG00000085940)	ENSSSAG00000057300	rasgrp4 (ENSSSAG00000095450) #31	ENSSSAG00000053578 #29	ENSSSAG00000052663 #17	ENSSSAG00000099604 #17	ENSSSAG00000047172	ENSSSAG00000109438	ENSSSAG00000052699	ENSSSAG00000052708	ENSSSAG00000116391	ENSSSAG00000052752	ENSSSAG00000053048	ENSSSAG00000084162	wdr62 (ENSSSAG00000053100)	ENSSSAG00000086331	arrb1 (ENSSSAG00000046647)	ENSSSAG00000052600	ENSSSAG00000109808	ENSSSAG00000052615	ENSSSAG00000052635
Northern pike	MODERN SPECIES		spred3 (ENSELUG00000021913) #33	psmd8 (ENSELUG00000021887) #35	EHD2 (ENSELUG00000021876)	BICRA (ENSELUG00000021865)	napab (ENSELUG00000021793)	B3GNT8 (ENSELUG00000021747)	bckdha (ENSELUG00000021736)	exosc5 (ENSELUG00000021719)	TMEM91 (ENSELUG00000021703)	ppp1r13l (ENSELUG00000021688)	opa3 (ENSELUG00000021676)	HNRNPUL1 (ENSELUG00000021668)	rasgrp4 (ENSELUG00000021643) #31	ryr1b (ENSELUG00000021513) #29	LGALS4 (ENSELUG00000021363) #17	ENSELUG00000021319 #17	LGALS4 (ENSELUG00000021308) #17	ENSELUG00000021295	ENSELUG00000021283	ENSELUG00000021278	tgfb1a (ENSELUG00000021267)	ppp5c (ENSELUG00000021250)	ENSELUG00000029315	wdr62 (ENSELUG00000021201)	ENSELUG00000032110	ENSELUG00000021133	arrb1 (ENSELUG00000021080)	ENSELUG00000021046	tmem97 (ENSELUG00000021022)	ENSELUG00000021006	ENSELUG00000020950
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	116	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000005826.a.a	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00390000015123	ENSGT00390000009588	ENSGT00390000016686	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17
Clupeiformes	ANCESTRAL SPECIES	127	ENSGT00390000014682 #35	ENSGT00390000015077	ENSGT00940000175063	ENSGT00940000159256.o	ENSGT00940000159112.b	ENSGT00390000005826.a.a.b	ENSGT00940000161895	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17
Atlantic herring	MODERN SPECIES	25	hnf1ba (ENSCHAG00000027245)	SYNRG (ENSCHAG00000027269)	dusp14 (ENSCHAG00000027289)	tada2a (ENSCHAG00000027311)	siae (ENSCHAG00000027385)	tbrg1 (ENSCHAG00000027392)	cfap45 (ENSCHAG00000027404)	ENSCHAG00000027417	bckdha (ENSCHAG00000027422)	exosc5 (ENSCHAG00000027431)	TMEM91 (ENSCHAG00000027435)	ppp1r13l (ENSCHAG00000027438)	opa3 (ENSCHAG00000027439)	rasgrp4 (ENSCHAG00000027444) #31	ryr1b (ENSCHAG00000027560) #29	LGALS4 (ENSCHAG00000027774) #17	MINDY4B (ENSCHAG00000027776)	ENSCHAG00000027777	cuedc1b (ENSCHAG00000027778)	ENSCHAG00000000302	FCHSD2 (ENSCHAG00000001158)	P2RY2 (ENSCHAG00000003451)	relt (ENSCHAG00000003472)	ARHGEF17 (ENSCHAG00000003565)	P2RY6 (ENSCHAG00000004003)	fam168a (ENSCHAG00000004019)	ENSCHAG00000004063	ENSCHAG00000004101	ENSCHAG00000004109	ENSCHAG00000004117	SLITRK3 (ENSCHAG00000004141)
Denticle herring	MODERN SPECIES	10	dhx34 (ENSDCDG00000029040)	spred3 (ENSDCDG00000029032) #33	psmd8 (ENSDCDG00000029030) #35	ehd2b (ENSDCDG00000029028)	BICRA (ENSDCDG00000029024)	napab (ENSDCDG00000028996)	B3GNT8 (ENSDCDG00000028993)	bckdha (ENSDCDG00000028988)	exosc5 (ENSDCDG00000028983)	TMEM91 (ENSDCDG00000028981)	ppp1r13l (ENSDCDG00000028975)	opa3 (ENSDCDG00000028973)	HNRNPUL1 (ENSDCDG00000028908)	rasgrp4 (ENSDCDG00000028902) #31	ryr1b (ENSDCDG00000028133) #29	LGALS4 (ENSDCDG00000027910) #17	P2RY1 (ENSDCDG00000027907)	RAP2B (ENSDCDG00000027905)	ARHGEF26 (ENSDCDG00000027902)	dhx36 (ENSDCDG00000027512)	GPR149 (ENSDCDG00000027484)	MME (ENSDCDG00000026639)	olfcs2 (ENSDCDG00000026613)	olfcw1 (ENSDCDG00000026595)	ENSDCDG00000026594	ENSDCDG00000026585	ENSDCDG00000026532	ENSDCDG00000026520	olfch1 (ENSDCDG00000026502)	olfcj1 (ENSDCDG00000026495)	ENSDCDG00000026476
Otophysi	ANCESTRAL SPECIES	243	ENSGT00390000005773	ENSGT00940000160358	ENSGT00940000166395	ENSGT00940000160667	ENSGT00940000153892.A	ENSGT00390000010608	ENSGT00940000157165.e.a	ENSGT00530000063174.b	ENSGT00940000153348.C	ENSGT00950000183147.A.b.a	ENSGT00940000160551	ENSGT00390000009795	ENSGT00940000157823	ENSGT00940000159883 #31	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17
Characiphysae	ANCESTRAL SPECIES	135							ENSGT00390000002172.A.a.e	ENSGT00390000013836	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00390000015123	ENSGT00390000009588	ENSGT00390000016686	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17	ENSGT00940000164309	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a	ENSGT01030000234935.c.a	ENSGT00940000156341.e.a	ENSGT00390000009902	ENSGT00940000175097	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000162313.b	ENSGT00940000159516	ENSGT00980000199573	ENSGT00940000156974.e.b	ENSGT00950000182887.C.b.b.a	ENSGT00390000008727.a.a.c	ENSGT00390000013169
Characiphysae_b	ANCESTRAL SPECIES	79	ENSGT00940000157884	ENSGT00410000025800	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00940000161811.a	ENSGT00940000161716.kc.a	ENSGT00390000002172.A.a.e	ENSGT00390000013836	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00390000015123	ENSGT00390000009588	ENSGT00390000016686	ENSGT00940000155312.b #30	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17	ENSGT00940000164309	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a	ENSGT01030000234935.c.a	ENSGT00940000156341.e.a	ENSGT00390000009902	ENSGT00940000175097	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000162313.b	ENSGT00940000159516	ENSGT00980000199573	ENSGT00940000156974.e.b	ENSGT00950000182887.C.b.b.a	ENSGT00390000008727.a.a.c	ENSGT00390000013169
Characoidei	ANCESTRAL SPECIES	449														ENSGT00940000165480.a	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17	ENSGT00940000160378.kb.a.b #17
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES		iqcg (ENSPNAG00000029169)	LRCH3 (ENSPNAG00000029583)	luzp2 (ENSPNAG00000006803)	ddb1 (ENSPNAG00000006635)	tspan4a (ENSPNAG00000029670)	taldo1 (ENSPNAG00000029697)	SLFN14 (ENSPNAG00000029722)	cd151l (ENSPNAG00000029748)	ENSPNAG00000029758	ENSPNAG00000029766	CHST1 (ENSPNAG00000029770)	ENSPNAG00000029773	ENSPNAG00000029775	ENSPNAG00000029783	ryr1b (ENSPNAG00000029825) #29	LGALS4 (ENSPNAG00000004679) #17	ENSPNAG00000029852 #17	cox5ab (ENSPNAG00000029859)	rpp25b (ENSPNAG00000029864)	ENSPNAG00000029869	ENSPNAG00000029884	PARP6 (ENSPNAG00000029909)	pkma (ENSPNAG00000029916)	dhdh.2 (ENSPNAG00000029927)	dhdh.1 (ENSPNAG00000004685)	HCN4 (ENSPNAG00000029937)	ENSPNAG00000029940	nptnb (ENSPNAG00000029945)	ENSPNAG00000029947	ugt5f1 (ENSPNAG00000029952)	ugt5c1 (ENSPNAG00000029959)
Red-bellied piranha	MODERN SPECIES	7	hpse (ENSPNAG00000009474)	MYL5 (ENSPNAG00000009502)	btc (ENSPNAG00000009530)	amacr (ENSPNAG00000009549)	slc45a2 (ENSPNAG00000009592)	rxfp3 (ENSPNAG00000005660)	GZMK (ENSPNAG00000009628)	rai14 (ENSPNAG00000009793)	fgf10a (ENSPNAG00000001336)	nnt (ENSPNAG00000009858)	ENSPNAG00000009880	ENSPNAG00000009913	MFHAS1 (ENSPNAG00000005011)	eri1 (ENSPNAG00000009938)	ppp1r3b (ENSPNAG00000009952)	ENSPNAG00000009965 #17	ENSPNAG00000010036	dusp4 (ENSPNAG00000010055)	ENSPNAG00000001365	zgc:86764 (ENSPNAG00000010125)	slc26a1 (ENSPNAG00000010144)	rbp4l (ENSPNAG00000010156)	PDE6B (ENSPNAG00000010235)	atp5mea (ENSPNAG00000010247)	hspb9l (ENSPNAG00000010263)	zgc:103482 (ENSPNAG00000010281)	ENSPNAG00000010340	st8sia3 (ENSPNAG00000005359)	ONECUT2 (ENSPNAG00000010362)	fech (ENSPNAG00000010385)	bxdc2 (ENSPNAG00000010431)
Mexicana tetra	MODERN SPECIES	479								ENSAMXG00000029689	ENSAMXG00000041000	ENSAMXG00000034761	ENSAMXG00000011310	ENSAMXG00000043828	ENSAMXG00000033279	ENSAMXG00000032967	ryr1b (ENSAMXG00000035931) #29	LGALS4 (ENSAMXG00000005597) #17	ENSAMXG00000042371	ENSAMXG00000007899 #17	ENSAMXG00000037824 #17
Electric eel	MODERN SPECIES	127												CELF6 (ENSEEEG00000015898)	rpp25b (ENSEEEG00000015897)	cox5ab (ENSEEEG00000015896)	ryr1b (ENSEEEG00000011963) #29	LGALS4 (ENSEEEG00000011784) #17	znf592 (ENSEEEG00000011779)	sec11a (ENSEEEG00000011771)	ENSEEEG00000011768	kti12 (ENSEEEG00000011767)	si:dkey-24l11.2 (ENSEEEG00000011764)	ch25hl1.2 (ENSEEEG00000011763)	tspan3a (ENSEEEG00000011750)	pstpip1a (ENSEEEG00000011747)	rcn2 (ENSEEEG00000011745)	PIK3C2A (ENSEEEG00000011039)	RPS13 (ENSEEEG00000011019)	ppp1r15b (ENSEEEG00000011015)	plekha7a (ENSEEEG00000011012)	zgc:56106 (ENSEEEG00000011011)	cd81b (ENSEEEG00000011007)
Channel catfish	MODERN SPECIES	23	ENSIPUG00000007942	ENSIPUG00000007986	ENSIPUG00000008306	ENSIPUG00000008364	wash1 (ENSIPUG00000008382)	ddx11 (ENSIPUG00000008500)	Fkbp4 (ENSIPUG00000008654)	ENSIPUG00000008707	ENSIPUG00000008710	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890) #29	lgals4 (ENSIPUG00000009143) #17	ENSIPUG00000009176	ENSIPUG00000009185	ENSIPUG00000009212	ENSIPUG00000009325	ENSIPUG00000009825 #17	ENSIPUG00000010287 #17	ENSIPUG00000010335 #17	ENSIPUG00000010369 #17	ENSIPUG00000010465 #17	COX5A (ENSIPUG00000010496)	RPP25 (ENSIPUG00000010514)	CELF6 (ENSIPUG00000010527)	parp6 (ENSIPUG00000010563)	pkma (ENSIPUG00000010651)	dhdh.2 (ENSIPUG00000010698)
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000160378.kb #17
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	722																ENSGT00940000160378.kb.a #17	ENSGT00940000178071.A
Characiphysae	ANCESTRAL SPECIES	331																ENSGT00940000160378.kb.a #17	ENSGT00940000178071.A	ENSGT00940000164543
Characiphysae_b	ANCESTRAL SPECIES	360																ENSGT00940000160378.kb.a #17	ENSGT00940000178071.A	ENSGT00940000164543
Characoidei	DUPLICATION
Characoidei	ANCESTRAL SPECIES	505																ENSGT00940000160378.kb.a.a #17	ENSGT00940000178071.A	ENSGT00940000164543
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	9	si:dkey-119f1.1 (ENSAMXG00000034179)	PIK3C2A (ENSAMXG00000020452)	rcn2 (ENSAMXG00000038297)	pstpip1a (ENSAMXG00000033352)	ch25hl1.2 (ENSAMXG00000026086)	tspan3a (ENSAMXG00000034845)	si:dkey-24l11.2 (ENSAMXG00000035914)	ENSAMXG00000031013	ENSAMXG00000035600	ENSAMXG00000031021	ENSAMXG00000032829	ENSAMXG00000033351	CHST1 (ENSAMXG00000024881)	ENSAMXG00000007871 #17	ENSAMXG00000033108 #17	ENSAMXG00000010704 #17	ENSAMXG00000036775	ENSAMXG00000041519	ENSAMXG00000030480	ENSAMXG00000036217 #17	ENSAMXG00000029899	cox5ab (ENSAMXG00000039983)	rpp25b (ENSAMXG00000044094)	ENSAMXG00000040551	CELF6 (ENSAMXG00000033823)	PARP6 (ENSAMXG00000005782)	pkma (ENSAMXG00000001020)	dhdh.2 (ENSAMXG00000030993)	dhdh.1 (ENSAMXG00000005808)	ENSAMXG00000038566	UNC13C (ENSAMXG00000018742)
Mexicana tetra	MODERN SPECIES	9	ch25hl1.2 (ENSAMXG00000026086)	tspan3a (ENSAMXG00000034845)	si:dkey-24l11.2 (ENSAMXG00000035914)	ENSAMXG00000031013	ENSAMXG00000035600	ENSAMXG00000031021	ENSAMXG00000032829	ENSAMXG00000033351	CHST1 (ENSAMXG00000024881)	ENSAMXG00000007871 #17	ENSAMXG00000033108 #17	ENSAMXG00000010704 #17	ENSAMXG00000036775	ENSAMXG00000041519	ENSAMXG00000030480	ENSAMXG00000036217 #17	ENSAMXG00000029899	cox5ab (ENSAMXG00000039983)	rpp25b (ENSAMXG00000044094)	ENSAMXG00000040551	CELF6 (ENSAMXG00000033823)	PARP6 (ENSAMXG00000005782)	pkma (ENSAMXG00000001020)	dhdh.2 (ENSAMXG00000030993)	dhdh.1 (ENSAMXG00000005808)	ENSAMXG00000038566	UNC13C (ENSAMXG00000018742)	ENSAMXG00000042134	onecut1 (ENSAMXG00000021213)	atosa (ENSAMXG00000032684)	rab27a (ENSAMXG00000021170)
Mexicana tetra	DUPLICATION
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	9	KCNJ5 (ENSAMXG00000009948)	st7 (ENSAMXG00000040154)	si:dkey-119f1.1 (ENSAMXG00000034179)	PIK3C2A (ENSAMXG00000020452)	rcn2 (ENSAMXG00000038297)	pstpip1a (ENSAMXG00000033352)	ch25hl1.2 (ENSAMXG00000026086)	tspan3a (ENSAMXG00000034845)	si:dkey-24l11.2 (ENSAMXG00000035914)	ENSAMXG00000031013	ENSAMXG00000035600	ENSAMXG00000031021	ENSAMXG00000032829	ENSAMXG00000033351	CHST1 (ENSAMXG00000024881)	ENSAMXG00000007871 #17	ENSAMXG00000033108 #17	ENSAMXG00000010704 #17	ENSAMXG00000036775	ENSAMXG00000041519	ENSAMXG00000030480	ENSAMXG00000036217 #17	ENSAMXG00000029899	cox5ab (ENSAMXG00000039983)	rpp25b (ENSAMXG00000044094)	ENSAMXG00000040551	CELF6 (ENSAMXG00000033823)	PARP6 (ENSAMXG00000005782)	pkma (ENSAMXG00000001020)	dhdh.2 (ENSAMXG00000030993)	dhdh.1 (ENSAMXG00000005808)
Mexicana tetra	MODERN SPECIES	479					ENSAMXG00000029689	ENSAMXG00000041000	ENSAMXG00000034761	ENSAMXG00000011310	ENSAMXG00000043828	ENSAMXG00000033279	ENSAMXG00000032967	ryr1b (ENSAMXG00000035931) #29	LGALS4 (ENSAMXG00000005597) #17	ENSAMXG00000042371	ENSAMXG00000007899 #17	ENSAMXG00000037824 #17
Mexicana tetra	MODERN SPECIES	9	st7 (ENSAMXG00000040154)	si:dkey-119f1.1 (ENSAMXG00000034179)	PIK3C2A (ENSAMXG00000020452)	rcn2 (ENSAMXG00000038297)	pstpip1a (ENSAMXG00000033352)	ch25hl1.2 (ENSAMXG00000026086)	tspan3a (ENSAMXG00000034845)	si:dkey-24l11.2 (ENSAMXG00000035914)	ENSAMXG00000031013	ENSAMXG00000035600	ENSAMXG00000031021	ENSAMXG00000032829	ENSAMXG00000033351	CHST1 (ENSAMXG00000024881)	ENSAMXG00000007871 #17	ENSAMXG00000033108 #17	ENSAMXG00000010704 #17	ENSAMXG00000036775	ENSAMXG00000041519	ENSAMXG00000030480	ENSAMXG00000036217 #17	ENSAMXG00000029899	cox5ab (ENSAMXG00000039983)	rpp25b (ENSAMXG00000044094)	ENSAMXG00000040551	CELF6 (ENSAMXG00000033823)	PARP6 (ENSAMXG00000005782)	pkma (ENSAMXG00000001020)	dhdh.2 (ENSAMXG00000030993)	dhdh.1 (ENSAMXG00000005808)	ENSAMXG00000038566
Characoidei	ANCESTRAL SPECIES	449													ENSGT00940000165480.a	ENSGT00940000155288.b #29	ENSGT00940000160378.jb #17	ENSGT00940000160378.kb.a.b #17
Mexicana tetra	MODERN SPECIES	479						ENSAMXG00000029689	ENSAMXG00000041000	ENSAMXG00000034761	ENSAMXG00000011310	ENSAMXG00000043828	ENSAMXG00000033279	ENSAMXG00000032967	ryr1b (ENSAMXG00000035931) #29	LGALS4 (ENSAMXG00000005597) #17	ENSAMXG00000042371	ENSAMXG00000007899 #17	ENSAMXG00000037824 #17
Red-bellied piranha	MODERN SPECIES		LRCH3 (ENSPNAG00000029583)	luzp2 (ENSPNAG00000006803)	ddb1 (ENSPNAG00000006635)	tspan4a (ENSPNAG00000029670)	taldo1 (ENSPNAG00000029697)	SLFN14 (ENSPNAG00000029722)	cd151l (ENSPNAG00000029748)	ENSPNAG00000029758	ENSPNAG00000029766	CHST1 (ENSPNAG00000029770)	ENSPNAG00000029773	ENSPNAG00000029775	ENSPNAG00000029783	ryr1b (ENSPNAG00000029825) #29	LGALS4 (ENSPNAG00000004679) #17	ENSPNAG00000029852 #17	cox5ab (ENSPNAG00000029859)	rpp25b (ENSPNAG00000029864)	ENSPNAG00000029869	ENSPNAG00000029884	PARP6 (ENSPNAG00000029909)	pkma (ENSPNAG00000029916)	dhdh.2 (ENSPNAG00000029927)	dhdh.1 (ENSPNAG00000004685)	HCN4 (ENSPNAG00000029937)	ENSPNAG00000029940	nptnb (ENSPNAG00000029945)	ENSPNAG00000029947	ugt5f1 (ENSPNAG00000029952)	ugt5c1 (ENSPNAG00000029959)	chrna5 (ENSPNAG00000029966)
Channel catfish	DUPLICATION
Channel catfish	DUPLICATION
Channel catfish	DUPLICATION
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	23	ENSIPUG00000008707	ENSIPUG00000008710	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890) #29	lgals4 (ENSIPUG00000009143) #17	ENSIPUG00000009176	ENSIPUG00000009185	ENSIPUG00000009212	ENSIPUG00000009325	ENSIPUG00000009825 #17	ENSIPUG00000010287 #17	ENSIPUG00000010335 #17	ENSIPUG00000010369 #17	ENSIPUG00000010465 #17	COX5A (ENSIPUG00000010496)	RPP25 (ENSIPUG00000010514)	CELF6 (ENSIPUG00000010527)	parp6 (ENSIPUG00000010563)	pkma (ENSIPUG00000010651)	dhdh.2 (ENSIPUG00000010698)	HCN4 (ENSIPUG00000010745)	rec114 (ENSIPUG00000010776)	nptn (ENSIPUG00000010803)	chrna5 (ENSIPUG00000010860)	ENSIPUG00000010882	CHRNA3 (ENSIPUG00000010887)	CHRNB4 (ENSIPUG00000010961)
Channel catfish	MODERN SPECIES	23	Fkbp4 (ENSIPUG00000008654)	ENSIPUG00000008707	ENSIPUG00000008710	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890) #29	lgals4 (ENSIPUG00000009143) #17	ENSIPUG00000009176	ENSIPUG00000009185	ENSIPUG00000009212	ENSIPUG00000009325	ENSIPUG00000009825 #17	ENSIPUG00000010287 #17	ENSIPUG00000010335 #17	ENSIPUG00000010369 #17	ENSIPUG00000010465 #17	COX5A (ENSIPUG00000010496)	RPP25 (ENSIPUG00000010514)	CELF6 (ENSIPUG00000010527)	parp6 (ENSIPUG00000010563)	pkma (ENSIPUG00000010651)	dhdh.2 (ENSIPUG00000010698)	HCN4 (ENSIPUG00000010745)	rec114 (ENSIPUG00000010776)	nptn (ENSIPUG00000010803)	chrna5 (ENSIPUG00000010860)	ENSIPUG00000010882	CHRNA3 (ENSIPUG00000010887)
Channel catfish	MODERN SPECIES	23	ENSIPUG00000008710	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890) #29	lgals4 (ENSIPUG00000009143) #17	ENSIPUG00000009176	ENSIPUG00000009185	ENSIPUG00000009212	ENSIPUG00000009325	ENSIPUG00000009825 #17	ENSIPUG00000010287 #17	ENSIPUG00000010335 #17	ENSIPUG00000010369 #17	ENSIPUG00000010465 #17	COX5A (ENSIPUG00000010496)	RPP25 (ENSIPUG00000010514)	CELF6 (ENSIPUG00000010527)	parp6 (ENSIPUG00000010563)	pkma (ENSIPUG00000010651)	dhdh.2 (ENSIPUG00000010698)	HCN4 (ENSIPUG00000010745)	rec114 (ENSIPUG00000010776)	nptn (ENSIPUG00000010803)	chrna5 (ENSIPUG00000010860)	ENSIPUG00000010882	CHRNA3 (ENSIPUG00000010887)	CHRNB4 (ENSIPUG00000010961)	ube2q1 (ENSIPUG00000010992)
Channel catfish	MODERN SPECIES	23	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890) #29	lgals4 (ENSIPUG00000009143) #17	ENSIPUG00000009176	ENSIPUG00000009185	ENSIPUG00000009212	ENSIPUG00000009325	ENSIPUG00000009825 #17	ENSIPUG00000010287 #17	ENSIPUG00000010335 #17	ENSIPUG00000010369 #17	ENSIPUG00000010465 #17	COX5A (ENSIPUG00000010496)	RPP25 (ENSIPUG00000010514)	CELF6 (ENSIPUG00000010527)	parp6 (ENSIPUG00000010563)	pkma (ENSIPUG00000010651)	dhdh.2 (ENSIPUG00000010698)	HCN4 (ENSIPUG00000010745)	rec114 (ENSIPUG00000010776)	nptn (ENSIPUG00000010803)	chrna5 (ENSIPUG00000010860)	ENSIPUG00000010882	CHRNA3 (ENSIPUG00000010887)	CHRNB4 (ENSIPUG00000010961)	ube2q1 (ENSIPUG00000010992)	SHF (ENSIPUG00000011023)
Channel catfish	MODERN SPECIES	23	ddx11 (ENSIPUG00000008500)	Fkbp4 (ENSIPUG00000008654)	ENSIPUG00000008707	ENSIPUG00000008710	ENSIPUG00000008716	ENSIPUG00000008724	chst1 (ENSIPUG00000008738)	ENSIPUG00000008762	ENSIPUG00000008787	ryr1b (ENSIPUG00000008890) #29	lgals4 (ENSIPUG00000009143) #17	ENSIPUG00000009176	ENSIPUG00000009185	ENSIPUG00000009212	ENSIPUG00000009325	ENSIPUG00000009825 #17	ENSIPUG00000010287 #17	ENSIPUG00000010335 #17	ENSIPUG00000010369 #17	ENSIPUG00000010465 #17	COX5A (ENSIPUG00000010496)	RPP25 (ENSIPUG00000010514)	CELF6 (ENSIPUG00000010527)	parp6 (ENSIPUG00000010563)	pkma (ENSIPUG00000010651)	dhdh.2 (ENSIPUG00000010698)	HCN4 (ENSIPUG00000010745)	rec114 (ENSIPUG00000010776)	nptn (ENSIPUG00000010803)	chrna5 (ENSIPUG00000010860)	ENSIPUG00000010882
Cyprinoidei	ANCESTRAL SPECIES	12	ENSGT00390000009423.b	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000164973	ENSGT00940000160004.e	ENSGT01050000244956.a.a.m.b	ENSGT00940000157577.c.b	ENSGT00940000161080	ENSGT00910000144204.b.g	ENSGT00940000154641.C.b	ENSGT00390000015967.v	ENSGT00940000159452	ENSGT00940000155357.a.a	ENSGT00940000158708.b	ENSGT00940000158487	ENSGT00940000160378.kb.a #17	ENSGT00940000178071.A	ENSGT01030000234621.B	ENSGT00940000160283.g.a
Cyprininae	ANCESTRAL SPECIES	217	ENSGT00390000009423.b.k	ENSGT00530000064359.c.a.i	ENSGT00940000155076.b.a.a.b.a	ENSGT00940000164973.q.b	ENSGT00940000160004.e.a	ENSGT01050000244956.a.a.m.a	ENSGT00940000157577.c.b.a	ENSGT00940000161080.d	ENSGT00910000144204.b.g.a	ENSGT00940000154641.C.b.l	ENSGT00390000015967.v	ENSGT00940000159452.e	ENSGT00940000155357.a.a.e.b	ENSGT00940000158708.b.g	ENSGT00940000158487	ENSGT00940000160378.kb.a #17	ENSGT00940000178071.A	ENSGT01030000234621.B	ENSGT00940000160283.g.a	ENSGT00940000153561.b.a.a.b.u.a	ENSGT00940000158565	ENSGT00390000000873.a.b.e	ENSGT01050000244900.a.a.b	ENSGT00940000153561.b.a.a.b.u.b	ENSGT00950000183151.a.a.a.f	ENSGT00940000160434.a	ENSGT00390000017361
Cyprininae_a	ANCESTRAL SPECIES	285	ENSGT00390000009423.b.k	ENSGT00530000064359.c.a.i	ENSGT00940000155076.b.a.a.b.a	ENSGT00940000164973.q.b	ENSGT00940000160004.e.a	ENSGT01050000244956.a.a.m.a	ENSGT00940000157577.c.b.a	ENSGT00940000161080.d	ENSGT00910000144204.b.g.a	ENSGT00940000154641.C.b.l	ENSGT00390000015967.v	ENSGT00940000159452.e	ENSGT00940000155357.a.a.e.b	ENSGT00940000158708.b.g	ENSGT00940000158487	ENSGT00940000160378.kb.a #17	ENSGT01030000234621.B	ENSGT00940000160283.g.a	ENSGT00940000153561.b.a.a.b.u.a	ENSGT00940000158565.z	ENSGT00390000000873.a.b.e	ENSGT01050000244900.a.a.b	ENSGT00940000153561.b.a.a.b.u.b	ENSGT00940000158565.y
Common carp reference	MODERN SPECIES	9	ENSCCRG00000020202	ENSCCRG00000018416	ENSCCRG00000022085	ENSCCRG00000022087	ENSCCRG00000021112	mob2b (ENSCCRG00000062446)	ENSCCRG00000072630	loxl1 (ENSCCRG00000076765)	insyn1 (ENSCCRG00000056222)	cd276 (ENSCCRG00000061249)	ENSCCRG00000019386	ubl7b (ENSCCRG00000066320)	ube2q1 (ENSCCRG00000032081)	ENSCCRG00000081443	ENSCCRG00000059956	ENSCCRG00000017373 #17	ENSCCRG00000011846	rap2b (ENSCCRG00000055637)	ENSCCRG00000064874	ENSCCRG00000049234	ENSCCRG00000076873	st7 (ENSCCRG00000033011)	ppfia1 (ENSCCRG00000033274)	ENSCCRG00000079945	ENSCCRG00000023631	ENSCCRG00000023618	ENSCCRG00000069942	ENSCCRG00000000908	ENSCCRG00000048354
Goldfish	MODERN SPECIES	39	tmem251 (ENSCARG00000058202)	si:dkeyp-55f12.3 (ENSCARG00000058196)	ubr7 (ENSCARG00000058169)	btbd7 (ENSCARG00000058148)	ENSCARG00000058132	ENSCARG00000058126	ENSCARG00000058097	ENSCARG00000057983	PPP4R4 (ENSCARG00000057936)	serpina10a (ENSCARG00000057913)	ENSCARG00000057905	KIF26A (ENSCARG00000057752)	MTHFD1 (ENSCARG00000054811)	ENSCARG00000054705	zbtb1 (ENSCARG00000054687)	ENSCARG00000054529 #17	ENSCARG00000054477	P2RY1 (ENSCARG00000054471)	rap2b (ENSCARG00000054464)	ENSCARG00000054359	CTTN (ENSCARG00000062656)	ENSCARG00000062639	ST7 (ENSCARG00000057129)	ENSCARG00000056998	ppfia1 (ENSCARG00000050096)	emilin1a (ENSCARG00000049857)	snap25a (ENSCARG00000049820)	cnstb (ENSCARG00000049812)	ENSCARG00000049799	hnrnpub (ENSCARG00000049625)	lft1 (ENSCARG00000049599)
Zebrafish	MODERN SPECIES	9	ENSDARG00000054363	ENSDARG00000040503	si:cabz01090165.1 (ENSDARG00000039500)	mob2b (ENSDARG00000012005)	ABCC8 (ENSDARG00000077007)	SCAMP5 (ENSDARG00000040274)	loxl1 (ENSDARG00000054451)	insyn1 (ENSDARG00000026247)	cd276 (ENSDARG00000003061)	ENSDARG00000105004	ubl7b (ENSDARG00000040286)	zgc:158464 (ENSDARG00000100342)	ube2q1 (ENSDARG00000100766)	CHRNB4 (ENSDARG00000101677)	CHRNA3 (ENSDARG00000100991)	ENSDARG00000104016 #17	P2RY1 (ENSDARG00000105281)	rap2b (ENSDARG00000103032)	taldo1 (ENSDARG00000103369)	tspan4a (ENSDARG00000089354)	ddb1 (ENSDARG00000074431)	PDPR (ENSDARG00000103288)	ENSDARG00000110545	ENSDARG00000102443	CTTN (ENSDARG00000011777)	ENSDARG00000099803	st7 (ENSDARG00000112691)	ST7 (ENSDARG00000039960)	ppfia1 (ENSDARG00000098674)	ENSDARG00000112431
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000160378.kb.b #17
Characiphysae	ANCESTRAL SPECIES	519															ENSGT00390000014380.h.b.a.b.a	ENSGT00940000160378.kb.b #17
Characiphysae_b	DUPLICATION
Characiphysae_b	ANCESTRAL SPECIES	49	ENSGT00950000182999.b.b	ENSGT01030000234518.C.a.b.a.b.b	ENSGT00390000001134.a.b	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00940000157735	ENSGT00940000160127.h	ENSGT00940000155353.a.a.b	ENSGT00940000164127.b	ENSGT00950000183029.B.i.a.a	ENSGT00940000155933.b.b	ENSGT00940000155134.z	ENSGT00390000006243	ENSGT00390000014380.h.b.a.b.b	ENSGT00940000160378.kb.b.a #17
Characoidei	ANCESTRAL SPECIES	179	ENSGT01030000234518.C.a.b.a.b.b	ENSGT00950000182999.b.b	ENSGT00390000001134.a.b	ENSGT00390000005954	ENSGT00390000013790	ENSGT00530000063106.C	ENSGT00940000157735	ENSGT00940000160127.h	ENSGT00940000155353.a.a.b	ENSGT00940000164127.b	ENSGT00950000183029.B.i.a.a	ENSGT00940000155933.b.b	ENSGT00940000155134.z	ENSGT00390000006243	ENSGT00390000014380.h.b.a.b.b.d	ENSGT00940000160378.kb.b.a #17
Red-bellied piranha	MODERN SPECIES	440							dlx2b (ENSPNAG00000010022)	itga6b (ENSPNAG00000010003)	ENSPNAG00000009941	eef1a1b (ENSPNAG00000009890)	ENSPNAG00000009866	RIMS1 (ENSPNAG00000009762)	cenpk (ENSPNAG00000009578)	lbx1b (ENSPNAG00000009553)	ENSPNAG00000009512	ENSPNAG00000009423 #17
Mexicana tetra	MODERN SPECIES	3	ubac2 (ENSAMXG00000030024)	dachc (ENSAMXG00000040839)	mzt1 (ENSAMXG00000033399)	bora (ENSAMXG00000000572)	DIS3 (ENSAMXG00000000563)	metap1d (ENSAMXG00000000558)	dlx2b (ENSAMXG00000000552)	itga6b (ENSAMXG00000000536)	ENSAMXG00000034633	eef1a1b (ENSAMXG00000020651)	ENSAMXG00000000507	RIMS1 (ENSAMXG00000000491)	cenpk (ENSAMXG00000042770)	lbx1b (ENSAMXG00000000484)	ENSAMXG00000000481	ENSAMXG00000035498 #17	get3 (ENSAMXG00000000478)	BEST2 (ENSAMXG00000029576)	fbxo48 (ENSAMXG00000031002)	prokr1a (ENSAMXG00000000449)	snrpb2 (ENSAMXG00000037263)	rnaseh2a (ENSAMXG00000000436)	ENSAMXG00000018995	junba (ENSAMXG00000025030)	dand5 (ENSAMXG00000030931)	ENSAMXG00000003579	rad23aa (ENSAMXG00000003562)	rnf11a (ENSAMXG00000018505)	ENSAMXG00000003529	ENSAMXG00000031403	ENSAMXG00000036035
Electric eel	MODERN SPECIES	8						ENSEEEG00000013540	RIMS1 (ENSEEEG00000013538)	cenpk (ENSEEEG00000013537)	lbx1b (ENSEEEG00000013536)	ENSEEEG00000013535	ENSEEEG00000013534	ENSEEEG00000013465	ENSEEEG00000013461	ENSEEEG00000013458	ENSEEEG00000013457	ENSEEEG00000013455 #17	inab (ENSEEEG00000013453)	nt5c2b (ENSEEEG00000013421)	CNNM2 (ENSEEEG00000013418)	as3mt (ENSEEEG00000013414)	wbp1lb (ENSEEEG00000013411)	poll (ENSEEEG00000013410)	dpcd (ENSEEEG00000013408)	fgf8b (ENSEEEG00000013407)	slc2a15b (ENSEEEG00000013405)	ENSEEEG00000013402	zgc:172122 (ENSEEEG00000013400)	tpt1 (ENSEEEG00000013398)	gtf2f2a (ENSEEEG00000013391)	gpalpp1 (ENSEEEG00000013387)	ENSEEEG00000013385
Characiphysae_b	ANCESTRAL SPECIES	529															ENSGT00390000014380.h.b.a.b.a	ENSGT00940000160378.kb.b.b #17
Characoidei	ANCESTRAL SPECIES	677															ENSGT00390000014380.h.b.a.b.a	ENSGT00940000160378.kb.b.b #17
Red-bellied piranha	DUPLICATION
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	391															ENSPNAG00000020515	ENSPNAG00000020553 #17	ENSPNAG00000020581 #17	ENSPNAG00000020707	ENSPNAG00000020815	get3 (ENSPNAG00000020848)	ENSPNAG00000020873	BEST2 (ENSPNAG00000020903)	ENSPNAG00000020913	fbxo48 (ENSPNAG00000020921)	ENSPNAG00000020934	prokr1a (ENSPNAG00000020941)	snrpb2 (ENSPNAG00000020984)	rnaseh2a (ENSPNAG00000021017)	prdx2 (ENSPNAG00000021025)	junba (ENSPNAG00000021060)	dand5 (ENSPNAG00000021090)
Red-bellied piranha	MODERN SPECIES	391														ENSPNAG00000020515	ENSPNAG00000020553 #17	ENSPNAG00000020581 #17	ENSPNAG00000020707	ENSPNAG00000020815	get3 (ENSPNAG00000020848)	ENSPNAG00000020873	BEST2 (ENSPNAG00000020903)	ENSPNAG00000020913	fbxo48 (ENSPNAG00000020921)	ENSPNAG00000020934	prokr1a (ENSPNAG00000020941)	snrpb2 (ENSPNAG00000020984)	rnaseh2a (ENSPNAG00000021017)	prdx2 (ENSPNAG00000021025)	junba (ENSPNAG00000021060)	dand5 (ENSPNAG00000021090)	ENSPNAG00000021109
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	197		ENSPNAG00000005236 #17	ENSPNAG00000010002	ENSPNAG00000001360	slc2a15b (ENSPNAG00000010080)	fgf8b (ENSPNAG00000010197)	dpcd (ENSPNAG00000010230)	poll (ENSPNAG00000010238)	wbp1lb (ENSPNAG00000010243)	as3mt (ENSPNAG00000010264)	CNNM2 (ENSPNAG00000010318)	nt5c2b (ENSPNAG00000006807)	inab (ENSPNAG00000010378)	ENSPNAG00000010387	ENSPNAG00000001418	ENSPNAG00000010652 #17	ENSPNAG00000010664	ENSPNAG00000001425	rab3da (ENSPNAG00000010705)	pld6 (ENSPNAG00000010713)	cnn1a (ENSPNAG00000010750)	raph1b (ENSPNAG00000010883)	spp2 (ENSPNAG00000010895)	alg11 (ENSPNAG00000007163)	cpb2 (ENSPNAG00000010990)	zc3h13 (ENSPNAG00000011008)	tm9sf2 (ENSPNAG00000001502)	zic2b (ENSPNAG00000011062)	pcca (ENSPNAG00000011078)	ENSPNAG00000011093	marchf4l (ENSPNAG00000001535)
Red-bellied piranha	MODERN SPECIES	197	ENSPNAG00000010664	ENSPNAG00000010652 #17	ENSPNAG00000001418	ENSPNAG00000010387	inab (ENSPNAG00000010378)	nt5c2b (ENSPNAG00000006807)	CNNM2 (ENSPNAG00000010318)	as3mt (ENSPNAG00000010264)	wbp1lb (ENSPNAG00000010243)	poll (ENSPNAG00000010238)	dpcd (ENSPNAG00000010230)	fgf8b (ENSPNAG00000010197)	slc2a15b (ENSPNAG00000010080)	ENSPNAG00000001360	ENSPNAG00000010002	ENSPNAG00000005236 #17
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	274																ENSIPUG00000011384 #17
Channel catfish	MODERN SPECIES	18	chmp2bb (ENSIPUG00000023443)	creb1a (ENSIPUG00000023440)	dhrsx (ENSIPUG00000023427)	cd99 (ENSIPUG00000023425)	gyg2 (ENSIPUG00000023416)	mxra5 (ENSIPUG00000023400)	prkx (ENSIPUG00000023395)	ENSIPUG00000022825	nlgn4x (ENSIPUG00000022818)	pudp (ENSIPUG00000022808)	pnpla4 (ENSIPUG00000022785)	sts (ENSIPUG00000022779)	anos1 (ENSIPUG00000022769)	ENSIPUG00000022766	ENSIPUG00000022753	ENSIPUG00000022748 #17	slc2a15b (ENSIPUG00000022730)	fgf8b (ENSIPUG00000022725)	dpcd (ENSIPUG00000022713)	poll (ENSIPUG00000022704)	wbp1lb (ENSIPUG00000022700)	ENSIPUG00000022695	as3mt (ENSIPUG00000022683)	CNNM2 (ENSIPUG00000022677)	nt5c2b (ENSIPUG00000022637)	ina (ENSIPUG00000022635)	ENSIPUG00000022629	ENSIPUG00000022620	lbx1b (ENSIPUG00000022616)	cenpk (ENSIPUG00000022610)	RIMS1 (ENSIPUG00000022460)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES		SHKBP1 (ENSECRG00000000098)	ENSECRG00000000099	ENSECRG00000000100	ENSECRG00000000101	ENSECRG00000000102	kcnk6 (ENSECRG00000000103)	enkd1 (ENSECRG00000000104)	polb (ENSECRG00000000105)	ENSECRG00000000106	DKK4 (ENSECRG00000000107)	ENSECRG00000000108	ENSECRG00000000109	ENSECRG00000000110	ENSECRG00000000111	RYR1 (ENSECRG00000000112) #29	LGALS4 (ENSECRG00000000113) #17	ENSECRG00000000114 #17	ENSECRG00000000115	ENSECRG00000000116	ENSECRG00000000117	ENSECRG00000000118	ENSECRG00000000119	ENSECRG00000000120	ENSECRG00000000121	ENSECRG00000000122	ENSECRG00000000123	ENSECRG00000000124	ENSECRG00000000125	ENSECRG00000000126	ENSECRG00000000127	ENSECRG00000000128
Reedfish	MODERN SPECIES		ENSECRG00000000099	ENSECRG00000000100	ENSECRG00000000101	ENSECRG00000000102	kcnk6 (ENSECRG00000000103)	enkd1 (ENSECRG00000000104)	polb (ENSECRG00000000105)	ENSECRG00000000106	DKK4 (ENSECRG00000000107)	ENSECRG00000000108	ENSECRG00000000109	ENSECRG00000000110	ENSECRG00000000111	RYR1 (ENSECRG00000000112) #29	LGALS4 (ENSECRG00000000113) #17	ENSECRG00000000114 #17	ENSECRG00000000115	ENSECRG00000000116	ENSECRG00000000117	ENSECRG00000000118	ENSECRG00000000119	ENSECRG00000000120	ENSECRG00000000121	ENSECRG00000000122	ENSECRG00000000123	ENSECRG00000000124	ENSECRG00000000125	ENSECRG00000000126	ENSECRG00000000127	ENSECRG00000000128	ENSECRG00000000129