Vertebrata ANCESTRAL SPECIES ENSGT00940000163126 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000163126 #22 Euteleostomi ANCESTRAL SPECIES 158 ENSGT00940000159972 #33 ENSGT00950000182993.A.a #27 ENSGT00390000012434 #29 ENSGT00390000007212 #30 ENSGT00940000166580 #26 ENSGT00940000162714 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 Sarcopterygii ANCESTRAL SPECIES 22 ENSGT00940000162714 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 ENSGT00940000163715.b ENSGT01030000234515.a.b.b ENSGT00950000183158.B.b ENSGT00950000183158.B.a.a ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000154595 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000161659 #24 ENSGT00940000159478 #21 ENSGT00940000154886.a.a #19 ENSGT00910000144227 #18 ENSGT00390000006553 #17 ENSGT00990000211583 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000159489 ENSGT00390000012482 ENSGT00950000182904.a.b.b ENSGT00940000165052 ENSGT00940000160748 Tetrapoda ANCESTRAL SPECIES 59 ENSGT00530000063460.B ENSGT00940000164644 ENSGT00940000155528 ENSGT00940000166621 ENSGT00990000211583 ENSGT00390000006553 #17 ENSGT00910000144227 #18 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a #25 Anura ANCESTRAL SPECIES 45 ENSGT00390000000289 ENSGT00940000160899 ENSGT01070000253744.a.a.a.a ENSGT00390000015467 ENSGT00390000003821 ENSGT00940000162255 ENSGT01030000234528.C.c.a ENSGT00940000160280 ENSGT01050000244924.a.a.b ENSGT00940000154739.B ENSGT00940000160580 ENSGT00940000162161.A ENSGT00390000006553 #17 ENSGT00910000144227 #18 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000161659 #24 ENSGT00530000063553.b.a #25 ENSGT00940000166580 #26 ENSGT00950000182993.A.a #27 ENSGT00390000010184 #28 ENSGT00390000012434 #29 ENSGT00390000007212 #30 ENSGT00940000156466.c #31 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT01050000244879.a.a.a #35 ENSGT00940000155332.A #36 ENSGT00940000158800 #37 ENSGT00730000110920.b.a.a Frog MODERN SPECIES ENSXETG00000048356 #7 ENSXETG00000036450 #8 ENSXETG00000048871 #9 ENSXETG00000043372 #10 ENSXETG00000021946 #11 ENSXETG00000037311 #12 ENSXETG00000021930 #13 ENSXETG00000033501 #14 ENSXETG00000043243 #15 ENSXETG00000045564 #16 ndufa7 (ENSXETG00000037991) #17 rps28p9 (ENSXETG00000021905) #18 kank3 (ENSXETG00000021895) #19 ENSXETG00000046810 #20 angptl4 (ENSXETG00000021893) #21 rab11b.1 (ENSXETG00000025484) #22 marchf2 (ENSXETG00000021892) #23 rab11b.2 (ENSXETG00000021890) #24 lonp1 (ENSXETG00000021888) #25 larp6-like.1 (ENSXETG00000021887) #26 nrtn (ENSXETG00000036233) #27 med11 (ENSXETG00000045957) #28 ndufa11 (ENSXETG00000021885) #29 vmac (ENSXETG00000021884) #30 caps (ENSXETG00000021881) #31 ranbp3 (ENSXETG00000025475) #32 slc1a6 (ENSXETG00000021879) #33 ENSXETG00000048263 #34 rfx2 (ENSXETG00000021877) #35 acsbg2 (ENSXETG00000021876) #36 mllt1 (ENSXETG00000021875) #37 Amniota ANCESTRAL SPECIES 63 ENSGT00940000165063 ENSGT00390000005847 ENSGT00940000160888 ENSGT00530000063460.B ENSGT00940000164644 ENSGT00940000155528 ENSGT00940000166621 ENSGT00990000211583 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00940000163715.b ENSGT00510000047872 ENSGT00950000186377 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b Sauria ANCESTRAL SPECIES 50 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.s.b #18 ENSGT00990000211583 ENSGT00390000006553 #17 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000163715.b ENSGT00960000188000 ENSGT00510000047872 ENSGT00950000186377 ENSGT00940000158753 ENSGT00940000159993 ENSGT00940000155418.a.a ENSGT00390000014000 ENSGT00940000160274 Lepidosauria ANCESTRAL SPECIES 129 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c tuatara MODERN SPECIES 864 ELAVL1 (ENSSPUG00000002077) ENSSPUG00000002093 ENSSPUG00000002156 ENSSPUG00000002165 NDUFA7 (ENSSPUG00000002182) #17 RPS28 (ENSSPUG00000002186) #18 KANK3 (ENSSPUG00000002196) ANGPTL4 (ENSSPUG00000002237) #21 ENSSPUG00000002243 #22 MARCHF2 (ENSSPUG00000002247) #23 HNRNPM (ENSSPUG00000002270) TIMM44 (ENSSPUG00000002303) CTXN1 (ENSSPUG00000002310) ENSSPUG00000002316 Episquamata ANCESTRAL SPECIES 18 ENSGT00390000003821 ENSGT00940000162255 ENSGT00940000160280 ENSGT01050000244924.a.a.b ENSGT00940000154739.B ENSGT00940000160580 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000161989 ENSGT00940000161493 ENSGT00940000163917.b Toxicofera ANCESTRAL SPECIES 60 ENSGT00940000164644 ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000161989 ENSGT00940000161493 ENSGT00940000163917.b Elapidae ANCESTRAL SPECIES 59 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.b ENSGT00940000161989 ENSGT00940000161493 ENSGT00940000163917.b Indian cobra MODERN SPECIES ENSNNAG00000002600 ENSNNAG00000002674 ENSNNAG00000002684 ENSNNAG00000002692 ENSNNAG00000002708 ENSNNAG00000002720 ENSNNAG00000002731 ENSNNAG00000002741 ENSNNAG00000002753 ENSNNAG00000002772 ENSNNAG00000002783 ENSNNAG00000002800 NMRK2 (ENSNNAG00000002808) ATCAY (ENSNNAG00000002815) ANGPTL4 (ENSNNAG00000002840) #21 ENSNNAG00000002847 #22 MARCHF2 (ENSNNAG00000002853) #23 HNRNPM (ENSNNAG00000002860) TIMM44 (ENSNNAG00000002879) CTXN1 (ENSNNAG00000002901) ENSNNAG00000002910 ENSNNAG00000002921 ENSNNAG00000002948 ENSNNAG00000002964 PCSK4 (ENSNNAG00000002982) REEP6 (ENSNNAG00000003021) ENSNNAG00000003027 ELAVL1 (ENSNNAG00000003038) ENSNNAG00000003046 ENSNNAG00000003056 ENSNNAG00000003068 Elapidae_a ANCESTRAL SPECIES 130 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000154886.a.a #19 ENSGT00940000155876.m ENSGT00950000185125 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00960000193104 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.b ENSGT00940000161989 Acanthophiinae ANCESTRAL SPECIES 81 ENSGT00900000141164 ENSGT00940000165651 ENSGT00940000157343.c.b ENSGT00940000157343.c.a ENSGT00940000161384 ENSGT00950000182844.b.b.a ENSGT00940000159463 ENSGT00950000183076.a.b.b.a.b ENSGT00390000007227.a ENSGT00940000155620 ENSGT00390000006100 ENSGT00940000158230 ENSGT00940000163126 #22 ENSGT00940000165149 ENSGT00940000161732 ENSGT00940000157244 ENSGT00960000192439.a ENSGT01020000230359.A ENSGT00390000012496.b ENSGT00940000162770.p.b ENSGT00940000162622 ENSGT00390000014633 ENSGT00940000155451.s ENSGT00510000048151 ENSGT00640000091486.a ENSGT00390000018613.b ENSGT00940000164681 ENSGT00390000011180 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 966 ENSNSUG00000009574 #21 ENSNSUG00000009573 #22 Mainland tiger snake MODERN SPECIES 933 ENSNSUG00000006832 #21 ENSNSUG00000006830 #22 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 96 PPP2R5B (ENSPTXG00000016501) ENSPTXG00000016498 ATG2A (ENSPTXG00000016494) ENSPTXG00000016490 ENSPTXG00000016488 PC (ENSPTXG00000016469) ENSPTXG00000016468 ENSPTXG00000016467 HAPLN2 (ENSPTXG00000016465) RHBG (ENSPTXG00000016463) MEF2D (ENSPTXG00000016452) IQGAP3 (ENSPTXG00000016444) UBQLN4 (ENSPTXG00000016442) LAMTOR2 (ENSPTXG00000016441) RAB25 (ENSPTXG00000016440) ENSPTXG00000016439 #22 ENSPTXG00000016437 MEX3A (ENSPTXG00000016434) LMNA (ENSPTXG00000016432) ENSPTXG00000016426 ENSPTXG00000016424 ENSPTXG00000016422 ENSPTXG00000016419 CX3CR1 (ENSPTXG00000016417) VANGL2 (ENSPTXG00000016413) ENSPTXG00000016411 NHLH1 (ENSPTXG00000016409) NCSTN (ENSPTXG00000016406) COPA (ENSPTXG00000015419) ENSPTXG00000015401 TAF6L (ENSPTXG00000015400) Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 889 ENSPTXG00000015214 #22 Eastern brown snake MODERN SPECIES 886 ENSPTXG00000015210 #22 Laterata ANCESTRAL SPECIES 56 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000158364 ENSGT00390000004172.s ENSGT00940000163125 ENSGT00950000182993.A.a #27 ENSGT00550000075134 ENSGT00940000158800 #37 ENSGT00940000155332.A #36 ENSGT01050000244879.a.a.a #35 ENSGT00390000016128 ENSGT00730000110920.b.a.a ENSGT00950000182907.b ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000161989 ENSGT00940000161493 ENSGT00940000163917.b Argentine black and white tegu MODERN SPECIES 109 ENSSMRG00000019632 #18 KANK3 (ENSSMRG00000019631) NMRK2 (ENSSMRG00000019630) ATCAY (ENSSMRG00000019629) ENSSMRG00000019628 ENSSMRG00000019627 NRTN (ENSSMRG00000019626) #27 DUS3L (ENSSMRG00000019625) MLLT1 (ENSSMRG00000019624) #37 ACSBG2 (ENSSMRG00000019531) #36 RFX2 (ENSSMRG00000019530) #35 PRR22 (ENSSMRG00000019529) ACER1 (ENSSMRG00000019527) ENSSMRG00000019526 ANGPTL4 (ENSSMRG00000019523) #21 ENSSMRG00000019521 #22 MARCHF2 (ENSSMRG00000019520) #23 ENSSMRG00000019519 ENSSMRG00000019518 TIMM44 (ENSSMRG00000019517) FBN3 (ENSSMRG00000017819) CERS4 (ENSSMRG00000017801) ENSSMRG00000017791 REEP6 (ENSSMRG00000017789) ENSSMRG00000017788 ENSSMRG00000017787 ELAVL1 (ENSSMRG00000017783) MYDGF (ENSSMRG00000017781) TNFAIP8L1 (ENSSMRG00000017780) SEMA6B (ENSSMRG00000017769) ENSSMRG00000017764 Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 7 ENSPMRG00000017492 ENSPMRG00000017496 GPATCH4 (ENSPMRG00000017498) NAXE (ENSPMRG00000017502) ENSPMRG00000017504 ENSPMRG00000017511 ENSPMRG00000017521 ENSPMRG00000017525 ENSPMRG00000017535 ENSPMRG00000017541 ENSPMRG00000017551 ENSPMRG00000017565 UBQLN4 (ENSPMRG00000017572) LAMTOR2 (ENSPMRG00000017582) RAB25 (ENSPMRG00000017595) ENSPMRG00000017624 #22 ENSPMRG00000017630 #22 MEX3A (ENSPMRG00000017636) LMNA (ENSPMRG00000017646) ENSPMRG00000017660 ENSPMRG00000017669 ENSPMRG00000017683 SLC25A44 (ENSPMRG00000017691) PMF1 (ENSPMRG00000017696) ENSPMRG00000017700 ENSPMRG00000017706 VANGL2 (ENSPMRG00000017711) ENSPMRG00000017721 NHLH1 (ENSPMRG00000017730) NCSTN (ENSPMRG00000017736) COPA (ENSPMRG00000017757) Common wall lizard MODERN SPECIES 7 ENSPMRG00000017496 GPATCH4 (ENSPMRG00000017498) NAXE (ENSPMRG00000017502) ENSPMRG00000017504 ENSPMRG00000017511 ENSPMRG00000017521 ENSPMRG00000017525 ENSPMRG00000017535 ENSPMRG00000017541 ENSPMRG00000017551 ENSPMRG00000017565 UBQLN4 (ENSPMRG00000017572) LAMTOR2 (ENSPMRG00000017582) RAB25 (ENSPMRG00000017595) ENSPMRG00000017624 #22 ENSPMRG00000017630 #22 MEX3A (ENSPMRG00000017636) LMNA (ENSPMRG00000017646) ENSPMRG00000017660 ENSPMRG00000017669 ENSPMRG00000017683 SLC25A44 (ENSPMRG00000017691) PMF1 (ENSPMRG00000017696) ENSPMRG00000017700 ENSPMRG00000017706 VANGL2 (ENSPMRG00000017711) ENSPMRG00000017721 NHLH1 (ENSPMRG00000017730) NCSTN (ENSPMRG00000017736) COPA (ENSPMRG00000017757) MEN1 (ENSPMRG00000017785) Common wall lizard MODERN SPECIES 9 NMRK2 (ENSPMRG00000022201) ATCAY (ENSPMRG00000022211) ENSPMRG00000022218 NRTN (ENSPMRG00000022225) #27 ENSPMRG00000022226 DUS3L (ENSPMRG00000022231) MLLT1 (ENSPMRG00000022237) #37 ACSBG2 (ENSPMRG00000022245) #36 ENSPMRG00000022255 RFX2 (ENSPMRG00000022305) #35 ENSPMRG00000022430 PRR22 (ENSPMRG00000022432) ACER1 (ENSPMRG00000022435) ENSPMRG00000022439 ANGPTL4 (ENSPMRG00000022446) #21 ENSPMRG00000022448 #22 MARCHF2 (ENSPMRG00000022454) #23 ENSPMRG00000022458 ENSPMRG00000022463 TIMM44 (ENSPMRG00000022478) CTXN1 (ENSPMRG00000022489) ENSPMRG00000022496 FBN3 (ENSPMRG00000022515) ENSPMRG00000022527 ENSPMRG00000022557 GDF15 (ENSPMRG00000022696) ENSPMRG00000022701 SSBP4 (ENSPMRG00000022706) ISYNA1 (ENSPMRG00000022714) ELL (ENSPMRG00000022721) MRPL34 (ENSPMRG00000022728) Archelosauria ANCESTRAL SPECIES 20 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000163715.b ENSGT00960000188000 ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00940000155418.a.a ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b Cryptodira ANCESTRAL SPECIES 19 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b ENSGT00960000188000 ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993.j ENSGT00940000159993.i.b ENSGT00940000155418.a.a ENSGT00940000159993.i.a Chinese turtle MODERN SPECIES 1234 ANGPTL4 (ENSPSIG00000009486) #21 ENSPSIG00000010242 #22 ENSPSIG00000010905 MARCHF2 (ENSPSIG00000011348) #23 HNRNPM (ENSPSIG00000011477) TIMM44 (ENSPSIG00000012758) CTXN1 (ENSPSIG00000000531) ENSPSIG00000014464 ENSPSIG00000016223 ENSPSIG00000016309 ENSPSIG00000016314 ENSPSIG00000016617 LSM7 (ENSPSIG00000017149) SPPL2B (ENSPSIG00000017155) ENSPSIG00000017773 LMNB2 (ENSPSIG00000004232) MLLT1 (ENSPSIG00000004320) #37 Testudinoidea ANCESTRAL SPECIES 39 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553.i #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b ENSGT00960000188000 ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993.j ENSGT00940000159993.i.b ENSGT00940000155418.a.a ENSGT00940000159993.i.a Emydidae ANCESTRAL SPECIES 14 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT01060000249141 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553.i #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c.c ENSGT01030000234515.a.b.b.c.d ENSGT00940000163715.b ENSGT00510000047872 Three-toed box turtle MODERN SPECIES 323 ENSTMTG00000018784 ENSTMTG00000018804 ENSTMTG00000018819 #13 ENSTMTG00000018828 NDUFA7 (ENSTMTG00000018834) #17 ENSTMTG00000018843 #18 ENSTMTG00000018856 #19 ANGPTL4 (ENSTMTG00000018884) #21 ENSTMTG00000018897 #22 MARCHF2 (ENSTMTG00000018916) #23 HNRNPM (ENSTMTG00000018939) TIMM44 (ENSTMTG00000019096) CTXN1 (ENSTMTG00000019144) FBN3 (ENSTMTG00000019349) ENSTMTG00000020619 ENSTMTG00000020643 ENSTMTG00000020795 ENSTMTG00000020800 ENSTMTG00000020807 ENSTMTG00000020824 ENSTMTG00000020835 ENSTMTG00000020844 ENSTMTG00000020871 ENSTMTG00000020881 painted turtle MODERN SPECIES 763 ENSCPBG00000017102 ENSCPBG00000017101 MATK (ENSCPBG00000017100) ZFR2 (ENSCPBG00000017098) ELAVL1 (ENSCPBG00000017097) ENSCPBG00000017078 ENSCPBG00000017075 ENSCPBG00000017074 ENSCPBG00000017071 #13 ENSCPBG00000017070 NDUFA7 (ENSCPBG00000017068) #17 RPS28 (ENSCPBG00000017064) #18 KANK3 (ENSCPBG00000017062) ENSCPBG00000017060 ANGPTL4 (ENSCPBG00000017058) #21 ENSCPBG00000017056 #22 MARCHF2 (ENSCPBG00000017054) #23 ENSCPBG00000017053 ENSCPBG00000017052 TIMM44 (ENSCPBG00000017050) Testudinidae ANCESTRAL SPECIES 3 ENSGT00940000159724 ENSGT00940000157619 ENSGT00940000153558.a ENSGT00940000167106 ENSGT00940000157343 ENSGT00940000161384 ENSGT00950000182844.b.b.a ENSGT00940000159463 ENSGT00950000183076.a.b.b.a.b ENSGT00390000007227.a ENSGT00390000008765.n ENSGT00940000155620 ENSGT00390000006100 ENSGT00940000158230 ENSGT00940000165149 ENSGT00940000163126 #22 ENSGT00940000161732 ENSGT00940000157244 ENSGT00940000161509 ENSGT00940000155399 ENSGT00940000162656 ENSGT00960000189418 ENSGT00940000160567 ENSGT00940000154566 ENSGT00390000002390.b ENSGT00390000005131.a ENSGT00570000079224 ENSGT00390000005125 ENSGT00940000158341 ENSGT01030000234534.B.a.a.b ENSGT00530000063074.a Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1671 ISG20L2 (ENSCABG00000017748) ENSCABG00000017751 ENSCABG00000017754 ENSCABG00000017759 ENSCABG00000017765 HAPLN2 (ENSCABG00000017810) RHBG (ENSCABG00000017984) MEF2D (ENSCABG00000017991) IQGAP3 (ENSCABG00000018011) NAXE (ENSCABG00000018099) ENSCABG00000018102 ENSCABG00000018117 UBQLN4 (ENSCABG00000018121) LAMTOR2 (ENSCABG00000018126) RAB25 (ENSCABG00000018130) ENSCABG00000018133 #22 ENSCABG00000018135 MEX3A (ENSCABG00000018137) LMNA (ENSCABG00000018140) SEMA4A (ENSCABG00000018143) SLC25A44 (ENSCABG00000018148) PMF1 (ENSCABG00000018150) ENSCABG00000018151 ENSCABG00000018152 SMG5 (ENSCABG00000018154) TMEM79 (ENSCABG00000018156) ENSCABG00000018157 ENSCABG00000018158 CCT3 (ENSCABG00000018159) SSR2 (ENSCABG00000018160) ARHGEF2 (ENSCABG00000018164) Abingdon island giant tortoise MODERN SPECIES 1258 ANGPTL4 (ENSCABG00000003439) #21 ENSCABG00000003437 #22 MARCHF2 (ENSCABG00000003434) #23 ENSCABG00000003431 Archosauria ANCESTRAL SPECIES 16 ENSGT00940000160775 ENSGT00940000162148 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT00940000163715.b ENSGT00510000047872 ENSGT00950000186377 ENSGT00940000158753 ENSGT00940000159993 ENSGT00940000155418.a.a ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b Australian saltwater crocodile MODERN SPECIES 62 ENSCPRG00005012745 MATK (ENSCPRG00005012763) ZFR2 (ENSCPRG00005012851) ELAVL1 (ENSCPRG00005012995) ENSCPRG00005013005 POLE4 (ENSCPRG00005013023) ENSCPRG00005013024 ENSCPRG00005013027 ENSCPRG00005013029 #13 ENSCPRG00005013031 NDUFA7 (ENSCPRG00005013033) #17 ENSCPRG00005013036 #18 ENSCPRG00005013042 #19 ENSCPRG00005013044 ANGPTL4 (ENSCPRG00005013045) #21 ENSCPRG00005013048 #22 RNASE4 (ENSCPRG00005013052) ENSCPRG00005013055 PIP4P1 (ENSCPRG00005013059) APEX1 (ENSCPRG00005013064) OSGEP (ENSCPRG00005013077) ENSCPRG00005013163 ENSCPRG00005013185 PARP2 (ENSCPRG00005013193) ENSCPRG00005013201 ENSCPRG00005013203 ENSCPRG00005013206 ENSCPRG00005013208 ENSCPRG00005013210 ENSCPRG00005013216 ENSCPRG00005013217 Aves ANCESTRAL SPECIES 20 ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.c ENSGT01030000234515.a.b.b.d ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00940000155418.a.a ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b African ostrich MODERN SPECIES 436 APBA3 (ENSSCUG00000010114) ENSSCUG00000010115 ENSSCUG00000010116 ENSSCUG00000010117 MATK (ENSSCUG00000010118) ELAVL1 (ENSSCUG00000010120) ENSSCUG00000010121 ENSSCUG00000010122 ENSSCUG00000010123 ENSSCUG00000010124 ENSSCUG00000010125 ENSSCUG00000010126 NDUFA7 (ENSSCUG00000010127) #17 ENSSCUG00000010128 #19 ANGPTL4 (ENSSCUG00000010129) #21 ENSSCUG00000010130 #22 Neognathae ANCESTRAL SPECIES 21 ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 #29 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000155418.a.a ENSGT00940000159993 ENSGT00940000158753 Galloanserae ANCESTRAL SPECIES 20 ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 #29 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 Anatidae ANCESTRAL SPECIES 57 ENSGT00940000163917.b ENSGT00940000160775 ENSGT00960000189460 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00390000005847 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000153527.d.rb ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 #29 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 ENSGT01030000234515.a.b.b.d Duck MODERN SPECIES 20 ENSAPLG00000005461 ENSAPLG00000026833 ENSAPLG00000017442 MATK (ENSAPLG00000003263) ENSAPLG00000025013 ELAVL1 (ENSAPLG00000003139) ENSAPLG00000002793 ENSAPLG00000027829 POLE4 (ENSAPLG00000028021) ENSAPLG00000011711 ENSAPLG00000017048 ENSAPLG00000011387 #13 ENSAPLG00000000921 NDUFA7 (ENSAPLG00000011378) #17 RPS28 (ENSAPLG00000000915) #18 ENSAPLG00000011046 #22 MARCHF2 (ENSAPLG00000010859) #23 ENSAPLG00000009418 ENSAPLG00000025050 ENSAPLG00000024808 ENSAPLG00000009942 NDUFA11 (ENSAPLG00000010040) #29 RANBP3 (ENSAPLG00000010044) #32 SLC1A6 (ENSAPLG00000010390) #33 LONP1 (ENSAPLG00000010693) #25 RPL36 (ENSAPLG00000018797) LMNB2 (ENSAPLG00000011044) TIMM13 (ENSAPLG00000016799) TMPRSS9 (ENSAPLG00000011476) SPPL2B (ENSAPLG00000011803) LSM7 (ENSAPLG00000020930) Pink-footed goose MODERN SPECIES 273 ENSABRG00000005747 ELAVL1 (ENSABRG00000005780) ENSABRG00000005795 ENSABRG00000005811 POLE4 (ENSABRG00000005824) ENSABRG00000005829 ENSABRG00000005834 ENSABRG00000005838 #13 ENSABRG00000005842 ENSABRG00000005848 ENSABRG00000005851 NDUFA7 (ENSABRG00000005861) #17 RPS28 (ENSABRG00000005883) #18 KANK3 (ENSABRG00000005888) ANGPTL4 (ENSABRG00000005894) #21 ENSABRG00000005901 #22 MARCHF2 (ENSABRG00000005907) #23 ENSABRG00000005911 ENSABRG00000005914 ENSABRG00000005917 ENSABRG00000005926 ENSABRG00000005931 ENSABRG00000005933 ENSABRG00000005934 #29 RANBP3 (ENSABRG00000005938) #32 ENSABRG00000005945 SLC1A6 (ENSABRG00000005963) #33 LONP1 (ENSABRG00000005996) #25 RPL36 (ENSABRG00000006017) LMNB2 (ENSABRG00000006047) TIMM13 (ENSABRG00000006070) Phasianidae ANCESTRAL SPECIES 19 ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063.b ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 #29 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000159993 ENSGT00940000158753 Japanese quail DUPLICATION Japanese quail MODERN SPECIES 17 ANP32E (ENSCJPG00005013913) PLEKHO1 (ENSCJPG00005013914) VPS45 (ENSCJPG00005013915) ENSCJPG00005013916 UBQLN4 (ENSCJPG00005013917) LAMTOR2 (ENSCJPG00005013918) RAB25 (ENSCJPG00005013919) ENSCJPG00005013920 #22 MEX3A (ENSCJPG00005013921) LMNA (ENSCJPG00005013923) SEMA4A (ENSCJPG00005013924) SLC25A44 (ENSCJPG00005013925) ENSCJPG00005013926 SMG5 (ENSCJPG00005013927) TMEM79 (ENSCJPG00005013928) GLMP (ENSCJPG00005013929) CCT3 (ENSCJPG00005013930) PEX19 (ENSCJPG00005013931) ENSCJPG00005013932 PEA15 (ENSCJPG00005013933) CASQ1 (ENSCJPG00005013934) ENSCJPG00005013966 F11R (ENSCJPG00005013969) Japanese quail MODERN SPECIES 20 ENSCJPG00005006159 ENSCJPG00005006158 ENSCJPG00005006157 MATK (ENSCJPG00005006156) ELAVL1 (ENSCJPG00005006154) ENSCJPG00005006153 ENSCJPG00005006148 POLE4 (ENSCJPG00005006146) ENSCJPG00005006142 ENSCJPG00005006140 #13 ENSCJPG00005006139 NDUFA7 (ENSCJPG00005006133) #17 RPS28 (ENSCJPG00005006130) #18 ENSCJPG00005006129 ANGPTL4 (ENSCJPG00005006125) #21 ENSCJPG00005006123 #22 MARCHF2 (ENSCJPG00005006121) #23 ENSCJPG00005006119 ENSCJPG00005006114 ENSCJPG00005006111 #29 ENSCJPG00005006106 ENSCJPG00005006105 RANBP3 (ENSCJPG00005006096) #32 SLC1A6 (ENSCJPG00005006091) #33 LONP1 (ENSCJPG00005006078) #25 ENSCJPG00005006077 LMNB2 (ENSCJPG00005006076) TIMM13 (ENSCJPG00005006075) TMPRSS9 (ENSCJPG00005006072) KANK3 (ENSCJPG00005006068) SPPL2B (ENSCJPG00005006065) Phasianidae_b ANCESTRAL SPECIES 20 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063.b ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00390000012434 #29 ENSGT00940000159238.a ENSGT00940000163073.e ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000159993 ENSGT00940000158753 Turkey MODERN SPECIES 23 TJP3 (ENSMGAG00000000963) APBA3 (ENSMGAG00000000958) ENSMGAG00000000932 ENSMGAG00000000927 ENSMGAG00000017507 ENSMGAG00000021609 MATK (ENSMGAG00000000903) ENSMGAG00000001015 ENSMGAG00000001030 ENSMGAG00000007590 ENSMGAG00000017295 #13 ENSMGAG00000020045 ENSMGAG00000007623 #19 ENSMGAG00000018454 ENSMGAG00000006435 #21 ENSMGAG00000000832 #22 MARCHF2 (ENSMGAG00000000837) #23 ENSMGAG00000000846 ENSMGAG00000000850 ENSMGAG00000019659 ENSMGAG00000000852 ENSMGAG00000000877 #32 ENSMGAG00000000763 #33 ENSMGAG00000000808 ENSMGAG00000022044 ENSMGAG00000010163 ENSMGAG00000021121 ENSMGAG00000020607 ENSMGAG00000014680 ENSMGAG00000000689 ENSMGAG00000000700 Chicken MODERN SPECIES 20 PCASP2 (ENSGALG00010028099) RAX2 (ENSGALG00010028092) ENSGALG00010028090 ENSGALG00010028089 MATK (ENSGALG00010028086) ELAVL1 (ENSGALG00010028083) ENSGALG00010028077 ENSGALG00010028074 POLE4 (ENSGALG00010028068) ADMP (ENSGALG00010028497) ENSGALG00010028481 #13 CD320 (ENSGALG00010028482) RPS28 (ENSGALG00010028463) #18 KANK3 (ENSGALG00010028457) ANGPTL4 (ENSGALG00010027751) #21 RAB11B (ENSGALG00010027741) #22 MARCHF2 (ENSGALG00010027740) #23 ENSGALG00010027738 BTN1A1 (ENSGALG00010027725) ENSGALG00010027718 ENSGALG00010027713 #29 ENSGALG00010027710 ENSGALG00010027708 RANBP3 (ENSGALG00010027668) #32 SLC1A6 (ENSGALG00010027636) #33 LONP1 (ENSGALG00010027614) #25 RPL36 (ENSGALG00010027609) LMNB2 (ENSGALG00010028375) TIMM13 (ENSGALG00010028368) TMPRSS9 (ENSGALG00010028362) SPPL2C (ENSGALG00010028357) Neognathae_b ANCESTRAL SPECIES 22 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT01030000234669.A.e.a.a.a.a.a.a.a.c.a ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 #29 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000155418.a.a ENSGT00940000159993 ENSGT00940000158753 Passeriformes ANCESTRAL SPECIES 27 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00910000144227.s.a #18 ENSGT00390000006553 #17 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a #25 ENSGT00940000159972 #33 ENSGT00940000158588 #32 ENSGT00390000012434 #29 ENSGT00940000164143.a Great tit MODERN SPECIES 21 ENSPMJG00000004606 ENSPMJG00000004597 ENSPMJG00000004591 MATK (ENSPMJG00000004576) ELAVL1 (ENSPMJG00000004561) ENSPMJG00000004552 ENSPMJG00000004531 POLE4 (ENSPMJG00000004528) ENSPMJG00000004514 ENSPMJG00000004507 #13 RPS28 (ENSPMJG00000004504) #18 ENSPMJG00000004478 NDUFA7 (ENSPMJG00000004474) #17 KANK3 (ENSPMJG00000004465) ANGPTL4 (ENSPMJG00000004451) #21 ENSPMJG00000004446 #22 MARCHF2 (ENSPMJG00000004429) #23 ENSPMJG00000004426 ENSPMJG00000004414 ENSPMJG00000004413 ENSPMJG00000004411 ENSPMJG00000004407 SPPL2B (ENSPMJG00000004404) TMPRSS9 (ENSPMJG00000004393) TIMM13 (ENSPMJG00000004388) LMNB2 (ENSPMJG00000004383) RPL36 (ENSPMJG00000004382) LONP1 (ENSPMJG00000004375) #25 SLC1A6 (ENSPMJG00000004370) #33 RANBP3 (ENSPMJG00000004358) #32 NDUFA11 (ENSPMJG00000004349) #29 Passeriformes_d ANCESTRAL SPECIES 28 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a #25 ENSGT00940000159972 #33 ENSGT00940000158588 #32 ENSGT00390000012434 #29 ENSGT00940000164143.a Flycatcher MODERN SPECIES 20 ENSFALG00000025032 ENSFALG00000023616 ENSFALG00000011704 ENSFALG00000011714 MATK (ENSFALG00000011720) ENSFALG00000011725 ENSFALG00000011740 ENSFALG00000023088 ENSFALG00000023564 ENSFALG00000011771 ENSFALG00000011787 #13 NDUFA7 (ENSFALG00000011794) #17 KANK3 (ENSFALG00000011816) ENSFALG00000027521 #18 ANGPTL4 (ENSFALG00000011805) #21 ENSFALG00000011828 #22 MARCHF2 (ENSFALG00000011843) #23 ENSFALG00000025676 ENSFALG00000011870 ENSFALG00000011904 LSM7 (ENSFALG00000011912) SPPL2B (ENSFALG00000011932) TMPRSS9 (ENSFALG00000011951) TIMM13 (ENSFALG00000011956) LMNB2 (ENSFALG00000011960) ENSFALG00000011964 ENSFALG00000011975 #25 ENSFALG00000011989 #33 ENSFALG00000011992 #32 ENSFALG00000012010 #29 ENSFALG00000012002 Passeriformes_g ANCESTRAL SPECIES 29 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a #25 ENSGT00940000159972 #33 ENSGT00940000158588 #32 ENSGT00390000012434 #29 ENSGT00940000164143.a Medium ground finch MODERN SPECIES 144 PIP5K1C (ENSGFOG00000012030) TJP3 (ENSGFOG00000012394) APBA3 (ENSGFOG00000012404) MRPL54 (ENSGFOG00000012408) ENSGFOG00000012410 ENSGFOG00000012415 MATK (ENSGFOG00000012418) ELAVL1 (ENSGFOG00000012421) ENSGFOG00000012426 ENSGFOG00000012450 ENSGFOG00000012457 ENSGFOG00000012463 ENSGFOG00000012467 #13 KANK3 (ENSGFOG00000012473) ANGPTL4 (ENSGFOG00000012478) #21 ENSGFOG00000012483 #22 MARCHF2 (ENSGFOG00000012488) #23 ENSGFOG00000012490 ENSGFOG00000012491 CERS4 (ENSGFOG00000012494) ENSGFOG00000012495 ENSGFOG00000012497 SPPL2B (ENSGFOG00000012498) TMPRSS9 (ENSGFOG00000012505) LMNB2 (ENSGFOG00000012515) RPL36 (ENSGFOG00000012523) LONP1 (ENSGFOG00000012543) #25 SLC1A6 (ENSGFOG00000012653) #33 RANBP3 (ENSGFOG00000012662) #32 NDUFA11 (ENSGFOG00000012672) #29 ENSGFOG00000012679 Passeroidea ANCESTRAL SPECIES 29 ENSGT00390000001201 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT01030000234515.a.b.b.c ENSGT00940000155273.lb.a ENSGT00940000155273.lb.b ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00390000014000 ENSGT00940000160274 ENSGT00390000011943.b ENSGT00530000063553.b.a #25 ENSGT00940000159972 #33 ENSGT00940000158588 #32 ENSGT00390000012434 #29 Zebra finch MODERN SPECIES 21 MRPL54 (ENSTGUG00000028379) ENSTGUG00000000138 RAX2 (ENSTGUG00000000137) ENSTGUG00000023054 MATK (ENSTGUG00000000123) ELAVL1 (ENSTGUG00000000118) ENSTGUG00000000105 ENSTGUG00000019237 POLE4 (ENSTGUG00000000102) ENSTGUG00000020421 ENSTGUG00000000100 #13 ENSTGUG00000000098 NDUFA7 (ENSTGUG00000018969) #17 KANK3 (ENSTGUG00000000089) ANGPTL4 (ENSTGUG00000000086) #21 ENSTGUG00000029625 #22 MARCHF2 (ENSTGUG00000000080) #23 ENSTGUG00000000070 ENSTGUG00000000068 ENSTGUG00000025887 SPPL2B (ENSTGUG00000000063) TMPRSS9 (ENSTGUG00000000057) TIMM13 (ENSTGUG00000020964) LMNB2 (ENSTGUG00000000051) ENSTGUG00000022738 RPL36 (ENSTGUG00000000049) LONP1 (ENSTGUG00000000038) #25 SLC1A6 (ENSTGUG00000000032) #33 RANBP3 (ENSTGUG00000000023) #32 ENSTGUG00000024287 NDUFA11 (ENSTGUG00000026250) #29 Common canary MODERN SPECIES 44 APBA3 (ENSSCAG00000001052) MRPL54 (ENSSCAG00000001032) ENSSCAG00000001022 ENSSCAG00000001011 ENSSCAG00000000989 MATK (ENSSCAG00000000977) ELAVL1 (ENSSCAG00000000962) ENSSCAG00000000890 ENSSCAG00000000860 ENSSCAG00000000847 ENSSCAG00000000842 ENSSCAG00000000837 #13 NDUFA7 (ENSSCAG00000000829) #17 KANK3 (ENSSCAG00000000806) ANGPTL4 (ENSSCAG00000000791) #21 ENSSCAG00000000780 #22 MARCHF2 (ENSSCAG00000000774) #23 ENSSCAG00000000768 CERS4 (ENSSCAG00000000761) ENSSCAG00000000751 ENSSCAG00000000746 LSM7 (ENSSCAG00000000739) SPPL2B (ENSSCAG00000000726) ENSSCAG00000000706 ENSSCAG00000000694 ENSSCAG00000000685 TIMM13 (ENSSCAG00000000680) LMNB2 (ENSSCAG00000000663) RPL36 (ENSSCAG00000000651) LONP1 (ENSSCAG00000000414) #25 SLC1A6 (ENSSCAG00000000322) #33 Neognathae_c ANCESTRAL SPECIES 24 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00960000189460 ENSGT00940000160775 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000165063 ENSGT00940000164521 #13 ENSGT00530000066804 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000158668.c.i.a.b ENSGT00940000153527.c.b.a.a.a.b.b ENSGT00940000163073.e ENSGT00940000159238.a ENSGT00390000012434 #29 ENSGT00940000158588 #32 ENSGT00940000159972 #33 ENSGT00530000063553.b.a #25 ENSGT00390000011943.b ENSGT00940000160274 ENSGT00390000014000 ENSGT00940000159993.a ENSGT00940000155418.a.a ENSGT00940000159993.b Kakapo MODERN SPECIES 13 ENSSHBG00005012944 ENSSHBG00005012929 MATK (ENSSHBG00005012904) ELAVL1 (ENSSHBG00005012884) ENSSHBG00005012824 ENSSHBG00005012800 ENSSHBG00005012752 POLE4 (ENSSHBG00005012734) ENSSHBG00005012716 ENSSHBG00005012697 #13 ENSSHBG00005012690 RPS28 (ENSSHBG00005012680) #18 NDUFA7 (ENSSHBG00005012663) #17 KANK3 (ENSSHBG00005012647) ANGPTL4 (ENSSHBG00005012634) #21 ENSSHBG00005012623 #22 MARCHF2 (ENSSHBG00005012619) #23 ENSSHBG00005012609 ENSSHBG00005012604 ENSSHBG00005012597 NDUFA11 (ENSSHBG00005012592) #29 RANBP3 (ENSSHBG00005012581) #32 SLC1A6 (ENSSHBG00005012557) #33 LONP1 (ENSSHBG00005012536) #25 RPL36 (ENSSHBG00005012522) YJU2 (ENSSHBG00005012508) SHD (ENSSHBG00005012500) ENSSHBG00005012489 FSD1 (ENSSHBG00005012454) MPND (ENSSHBG00005012428) SH3GL1 (ENSSHBG00005012415) Golden eagle MODERN SPECIES 3 ENSACCG00020012709 ENSACCG00020012751 ENSACCG00020012764 MATK (ENSACCG00020013164) ELAVL1 (ENSACCG00020013295) ENSACCG00020013372 ENSACCG00020013437 POLE4 (ENSACCG00020013458) ENSACCG00020013477 ENSACCG00020013490 #13 ENSACCG00020013504 NDUFA7 (ENSACCG00020013539) #17 ENSACCG00020013557 #18 KANK3 (ENSACCG00020013573) ANGPTL4 (ENSACCG00020013595) #21 ENSACCG00020013612 #22 MARCHF2 (ENSACCG00020013627) #23 ENSACCG00020013656 ENSACCG00020013668 ENSACCG00020013683 NDUFA11 (ENSACCG00020013705) #29 RANBP3 (ENSACCG00020013758) #32 SLC1A6 (ENSACCG00020013794) #33 LONP1 (ENSACCG00020013830) #25 ENSACCG00020013853 RPL36 (ENSACCG00020013872) LMNB2 (ENSACCG00020013893) TIMM13 (ENSACCG00020013930) ENSACCG00020013947 ENSACCG00020014045 ENSACCG00020014235 Mammalia ANCESTRAL SPECIES 108 ENSGT01030000234515.a.b.b ENSGT00950000183158.B.b ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 ENSGT00940000164521 #13 ENSGT00940000164512 ENSGT00940000165170 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00390000017407 Platypus MODERN SPECIES 84 ADAMTS18 (ENSOANG00000000765) ENSOANG00000050796 ENSOANG00000012135 FBN3 (ENSOANG00000006384) ELAVL1 (ENSOANG00000014244) ENSOANG00000014639 ENSOANG00000048974 ENSOANG00000002980 ENSOANG00000002981 #13 ENSOANG00000044705 NDUFA7 (ENSOANG00000041371) #17 RPS28 (ENSOANG00000047078) #18 ENSOANG00000010058 ENSOANG00000040589 ENSOANG00000049344 #21 ENSOANG00000045493 #22 MARCHF2 (ENSOANG00000044840) #23 HNRNPM (ENSOANG00000010259) TIMM44 (ENSOANG00000010261) CTXN1 (ENSOANG00000010264) ENSOANG00000037114 SLC1A6 (ENSOANG00000044986) #33 ENSOANG00000039636 ENSOANG00000013214 FSTL3 (ENSOANG00000049660) RNF126 (ENSOANG00000002706) ENSOANG00000044451 POLRMT (ENSOANG00000043621) ENSOANG00000041427 BSG (ENSOANG00000048631) ENSOANG00000021318 Theria ANCESTRAL SPECIES 48 ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00950000182907.b ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000159185 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00440000039287 ENSGT00940000163044 Marsupialia ANCESTRAL SPECIES 16 ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT00940000166621 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.e.a.b ENSGT01030000234515.a.b.b.e.b.a.b ENSGT01030000234515.a.b.b.e.b.a.a ENSGT01030000234515.a.b.b.f ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.eb ENSGT00950000182907.b ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000159185 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00530000063861.a ENSGT00940000158914 ENSGT00940000159311.c ENSGT00940000154382.a.a ENSGT00940000153846.a.b ENSGT00940000161836 Opossum MODERN SPECIES 2 ENSMODG00000028064 FBN3 (ENSMODG00000005011) ENSMODG00000004916 ENSMODG00000047978 ENSMODG00000004875 ENSMODG00000004533 ENSMODG00000038212 ENSMODG00000029681 ENSMODG00000025633 ENSMODG00000004320 ENSMODG00000037072 ENSMODG00000050183 #17 ENSMODG00000003890 #18 KANK3 (ENSMODG00000003881) ANGPTL4 (ENSMODG00000049909) #21 ENSMODG00000003841 #22 MARCHF2 (ENSMODG00000003824) #23 ENSMODG00000003801 ENSMODG00000003629 ENSMODG00000037452 MYO1F (ENSMODG00000003610) ENSMODG00000003530 ENSMODG00000037358 ZAP70 (ENSMODG00000003486) PLPP2 (ENSMODG00000006556) MIER2 (ENSMODG00000006643) ENSMODG00000022854 C2CD4C (ENSMODG00000006608) ODF3L2 (ENSMODG00000050322) ENSMODG00000006582 ENSMODG00000006567 Marsupialia_b ANCESTRAL SPECIES 17 ENSGT00390000000051 ENSGT00940000155528 ENSGT00940000166621 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.e.a.b ENSGT01030000234515.a.b.b.e.b.a.b ENSGT01030000234515.a.b.b.e.b.a.a.c ENSGT01030000234515.a.b.b.e.b.b ENSGT01030000234515.a.b.b.f ENSGT00940000165170 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.db.b ENSGT00940000154595.eb ENSGT00530000063460.B ENSGT00950000182907.b ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000159185 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00530000063861.a ENSGT00940000158914 ENSGT00940000159311.c ENSGT00940000154382.a.a Diprotodontia ANCESTRAL SPECIES 55 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT00940000166621 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.e.a.b ENSGT01030000234515.a.b.b.e.b.a.b ENSGT01030000234515.a.b.b.e.b.b ENSGT01030000234515.a.b.b.f ENSGT00940000165170 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.db.b ENSGT00530000063460.B ENSGT00950000182907.b ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000159185 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000158914 ENSGT00940000159311.c ENSGT00940000154382.a.a ENSGT00940000153846.a.b ENSGT00940000161836 Diprotodontia_a ANCESTRAL SPECIES 51 ENSGT00940000166621 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.e.a.b ENSGT01030000234515.a.b.b.e.b.a.b ENSGT01030000234515.a.b.b.e.a.a ENSGT01030000234515.a.b.b.e.b.a.a.c ENSGT01030000234515.a.b.b.e.b.a.a.d ENSGT01030000234515.a.b.b.e.b.b ENSGT01030000234515.a.b.b.f ENSGT00940000165170 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.e #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.db.b ENSGT00530000063460.B ENSGT00950000182907.b ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000159185 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000158914 ENSGT00940000159311.c ENSGT00940000154382.a.a ENSGT00940000153846.a.b ENSGT00940000161836 Common wonbat MODERN SPECIES 1126 ENSVURG00010024502 ELAVL1 (ENSVURG00010024505) ENSVURG00010024507 FBN3 (ENSVURG00010024556) ENSVURG00010024695 ENSVURG00010024699 ENSVURG00010024700 ENSVURG00010024704 ENSVURG00010024707 ENSVURG00010024712 ENSVURG00010024715 ENSVURG00010024717 #17 ENSVURG00010024719 #18 KANK3 (ENSVURG00010024723) ANGPTL4 (ENSVURG00010024725) #21 ENSVURG00010024728 #22 MARCHF2 (ENSVURG00010024730) #23 HNRNPM (ENSVURG00010024736) ENSVURG00010024740 ENSVURG00010024745 ENSVURG00010024748 MYO1F (ENSVURG00010024751) ENSVURG00010024757 ENSVURG00010024762 ZAP70 (ENSVURG00010024765) ACTL9 (ENSVURG00010024771) MAP2K7 (ENSVURG00010024777) LRRC8E (ENSVURG00010024781) ENSVURG00010000440 EVI5L (ENSVURG00010000493) ENSVURG00010000620 koala MODERN SPECIES 330 FBN3 (ENSPCIG00000020814) ENSPCIG00000020799 ENSPCIG00000020796 ENSPCIG00000015691 ENSPCIG00000020545 ENSPCIG00000020541 ENSPCIG00000020528 ENSPCIG00000020526 ENSPCIG00000020523 ENSPCIG00000020521 ENSPCIG00000020517 #17 ENSPCIG00000020515 #18 ENSPCIG00000034480 ENSPCIG00000020513 ANGPTL4 (ENSPCIG00000020509) #21 ENSPCIG00000020371 #22 MARCHF2 (ENSPCIG00000020366) #23 HNRNPM (ENSPCIG00000020115) ENSPCIG00000020108 ENSPCIG00000020107 ENSPCIG00000020105 MYO1F (ENSPCIG00000020103) ENSPCIG00000031301 ADAMTS10 (ENSPCIG00000019816) ZAP70 (ENSPCIG00000019809) ENSPCIG00000019808 ACTL9 (ENSPCIG00000019807) MAP2K7 (ENSPCIG00000019805) LRRC8E (ENSPCIG00000034357) ENSPCIG00000019802 EVI5L (ENSPCIG00000019797) Wallaby MODERN SPECIES 9144 ENSMEUG00000003686 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000030676 ENSSHAG00000026987 ENSSHAG00000022882 ENSSHAG00000007438 ENSSHAG00000028488 FBN3 (ENSSHAG00000005977) ENSSHAG00000029219 ENSSHAG00000001747 ENSSHAG00000001540 ENSSHAG00000003870 ENSSHAG00000008548 ENSSHAG00000027876 RPS28 (ENSSHAG00000022170) #18 ENSSHAG00000008037 ANGPTL4 (ENSSHAG00000007289) #21 ENSSHAG00000006816 #22 MARCHF2 (ENSSHAG00000027201) #23 HNRNPM (ENSSHAG00000005864) ENSSHAG00000026011 ENSSHAG00000005528 ENSSHAG00000022999 MYO1F (ENSSHAG00000003887) ADAMTS10 (ENSSHAG00000002176) ENSSHAG00000004075 ENSSHAG00000027862 ENSSHAG00000026426 MAP2K7 (ENSSHAG00000001994) LRRC8E (ENSSHAG00000029646) ENSSHAG00000022413 ENSSHAG00000004135 ENSSHAG00000005535 Eutheria ANCESTRAL SPECIES 27 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b Atlantogenata ANCESTRAL SPECIES ENSGT00940000163126 #22 Afrotheria ANCESTRAL SPECIES ENSGT00940000163126 #22 Tenrec MODERN SPECIES 251 ENSETEG00000000905 #22 Boreoeutheria ANCESTRAL SPECIES 18 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844 ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 Laurasiatheria ANCESTRAL SPECIES 15 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00960000190059 ENSGT00910000144227.t #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844 ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000163126 #22 Common shrew MODERN SPECIES 4879 ENSSARG00000011323 #22 Laurasiatheria_a ANCESTRAL SPECIES 19 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00960000190059 ENSGT00910000144227.s.b #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844 ENSGT00950000183005.b.c.a ENSGT00950000183005.b.c.b ENSGT00940000162163 ENSGT00940000161354 Artiodactyla ANCESTRAL SPECIES ENSGT00940000163126 #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000163126 #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000163126 #22 Cetacea ANCESTRAL SPECIES ENSGT00940000163126 #22 Odontoceti ANCESTRAL SPECIES ENSGT00940000163126 #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000163126 #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000163126 #22 Monodontidae ANCESTRAL SPECIES ENSGT00940000163126 #22 Beluga whale MODERN SPECIES 62 LRRC8E (ENSDLEG00000016842) MAP2K7 (ENSDLEG00000016809) TGFBR3L (ENSDLEG00000016788) SNAPC2 (ENSDLEG00000016775) CTXN1 (ENSDLEG00000016768) TIMM44 (ENSDLEG00000016738) ELAVL1 (ENSDLEG00000016728) CCL25 (ENSDLEG00000016722) FBN3 (ENSDLEG00000014671) CERS4 (ENSDLEG00000014299) ENSDLEG00000014271 NDUFA7 (ENSDLEG00000014266) #17 RPS28 (ENSDLEG00000014249) #18 KANK3 (ENSDLEG00000014113) ANGPTL4 (ENSDLEG00000014044) #21 ENSDLEG00000013992 #22 MARCH2 (ENSDLEG00000013953) #23 HNRNPM (ENSDLEG00000013836) PRAM1 (ENSDLEG00000013796) ZNF414 (ENSDLEG00000013766) MYO1F (ENSDLEG00000012681) ADAMTS10 (ENSDLEG00000012334) ACTL9 (ENSDLEG00000012304) ENSDLEG00000012289 ENSDLEG00000012286 ZNF699 (ENSDLEG00000012279) ENSDLEG00000012219 FBXL12 (ENSDLEG00000012204) ENSDLEG00000012198 UBL5 (ENSDLEG00000012177) PIN1 (ENSDLEG00000012167) Sperm whale MODERN SPECIES 299 ANGPTL4 (ENSPCTG00005016656) #21 RAB11B (ENSPCTG00005016539) #22 ENSPCTG00005016495 #23 MARCH2 (ENSPCTG00005016391) #23 Pecora ANCESTRAL SPECIES ENSGT00940000163126 #22 Percora_a ANCESTRAL SPECIES ENSGT00940000163126 #22 Bovidae ANCESTRAL SPECIES ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000154431.e.a.a.a.a ENSGT00940000154431.e.a.a.a.b ENSGT00950000183005.b.c.b.ab ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 Bovinae ANCESTRAL SPECIES 2 ENSGT00940000154382.a.a ENSGT00940000159311.c ENSGT00940000158914 ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000154431.e.a.a.a.a ENSGT00940000154431.e.a.a.a.b ENSGT00950000183005.b.c.b.ab ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 Bos ANCESTRAL SPECIES 3 ENSGT00940000154382.a.a ENSGT00940000159311.c ENSGT00940000158914 ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000154431.e.a.a.a.a ENSGT00940000154431.e.a.a.a.b ENSGT00950000183005.b.c.b.ab ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 Bos_a ANCESTRAL SPECIES ENSGT00940000163126 #22 Domestic yak MODERN SPECIES 27 ENSBGRG00000019544 EVI5L (ENSBGRG00000019640) LRRC8E (ENSBGRG00000020268) MAP2K7 (ENSBGRG00000020311) SNAPC2 (ENSBGRG00000020523) CTXN1 (ENSBGRG00000020556) TIMM44 (ENSBGRG00000020570) ELAVL1 (ENSBGRG00000020714) ENSBGRG00000020776 CERS4 (ENSBGRG00000024900) ENSBGRG00000025012 NDUFA7 (ENSBGRG00000025025) #17 ENSBGRG00000025044 #18 KANK3 (ENSBGRG00000025061) ANGPTL4 (ENSBGRG00000025096) #21 ENSBGRG00000025122 #22 MARCHF2 (ENSBGRG00000025151) #23 HNRNPM (ENSBGRG00000025188) ZNF414 (ENSBGRG00000025292) MYO1F (ENSBGRG00000025321) ADAMTS10 (ENSBGRG00000025401) ENSBGRG00000025413 ACTL9 (ENSBGRG00000025424) OR2Z1 (ENSBGRG00000025427) ENSBGRG00000025442 ENSBGRG00000025450 ENSBGRG00000025464 ENSBGRG00000025483 ADGRE1 (ENSBGRG00000025588) VAV1 (ENSBGRG00000025777) SH2D3A (ENSBGRG00000025904) Bos_b ANCESTRAL SPECIES 2 ENSGT00940000153846.a.b ENSGT00940000154382.a.a ENSGT00940000159311.c ENSGT00940000158914 ENSGT00390000017407 ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000154431.e.a.a.a.a ENSGT00940000154431.e.a.a.a.b ENSGT00390000018316.b.b.h ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 Hybrid Bos Indicus MODERN SPECIES 26 EVI5L (ENSBIXG00005009531) PRR36 (ENSBIXG00005009562) LRRC8E (ENSBIXG00005009576) MAP2K7 (ENSBIXG00005009621) SNAPC2 (ENSBIXG00005009650) TIMM44 (ENSBIXG00005009674) ELAVL1 (ENSBIXG00005009728) ENSBIXG00005009754 FBN3 (ENSBIXG00005010056) CERS4 (ENSBIXG00005007096) ENSBIXG00005005696 NDUFA7 (ENSBIXG00005010207) #17 RPS28 (ENSBIXG00005010232) #18 KANK3 (ENSBIXG00005000822) ANGPTL4 (ENSBIXG00005010288) #21 ENSBIXG00005010314 #22 MARCHF2 (ENSBIXG00005000850) #23 HNRNPM (ENSBIXG00005010359) PRAM1 (ENSBIXG00005010383) ZNF414 (ENSBIXG00005010399) MYO1F (ENSBIXG00005000747) ADAMTS10 (ENSBIXG00005000887) NFILZ (ENSBIXG00005010493) ACTL9 (ENSBIXG00005010501) OR2Z1 (ENSBIXG00005000894) ENSBIXG00005010532 ENSBIXG00005000932 ENSBIXG00005010956 VAV1 (ENSBIXG00005001021) SH2D3A (ENSBIXG00005011216) TRIP10 (ENSBIXG00005001055) Cow MODERN SPECIES 26 EVI5L (ENSBTAG00000004294) PRR36 (ENSBTAG00000044018) LRRC8E (ENSBTAG00000004300) MAP2K7 (ENSBTAG00000010639) SNAPC2 (ENSBTAG00000014926) TIMM44 (ENSBTAG00000015567) ELAVL1 (ENSBTAG00000000613) CCL25 (ENSBTAG00000005581) FBN3 (ENSBTAG00000000595) CERS4 (ENSBTAG00000003434) CD320 (ENSBTAG00000004403) NDUFA7 (ENSBTAG00000052280) #17 RPS28 (ENSBTAG00000002468) #18 KANK3 (ENSBTAG00000002469) ANGPTL4 (ENSBTAG00000002473) #21 RAB11B (ENSBTAG00000002475) #22 MARCHF2 (ENSBTAG00000021036) #23 HNRNPM (ENSBTAG00000021039) PRAM1 (ENSBTAG00000021041) ZNF414 (ENSBTAG00000007660) MYO1F (ENSBTAG00000007661) ADAMTS10 (ENSBTAG00000014207) ACTL9 (ENSBTAG00000011255) OR2Z1 (ENSBTAG00000051841) ENSBTAG00000054873 ENSBTAG00000053612 ENSBTAG00000052571 ENSBTAG00000049797 ENSBTAG00000038981 ADGRE1 (ENSBTAG00000007901) VAV1 (ENSBTAG00000039160) Caprinae ANCESTRAL SPECIES ENSGT00940000163126 #22 Goat MODERN SPECIES 26 ENSCHIG00000011063 EVI5L (ENSCHIG00000009385) LRRC8E (ENSCHIG00000020260) MAP2K7 (ENSCHIG00000021476) CTXN1 (ENSCHIG00000008271) ENSCHIG00000024164 ELAVL1 (ENSCHIG00000014334) CCL25 (ENSCHIG00000026192) FBN3 (ENSCHIG00000012166) CERS4 (ENSCHIG00000006098) ENSCHIG00000021021 NDUFA7 (ENSCHIG00000009187) #17 RPS28 (ENSCHIG00000017787) #18 KANK3 (ENSCHIG00000012453) ANGPTL4 (ENSCHIG00000023643) #21 ENSCHIG00000022426 #22 ENSCHIG00000016628 #23 HNRNPM (ENSCHIG00000026313) PRAM1 (ENSCHIG00000006566) ZNF414 (ENSCHIG00000003887) MYO1F (ENSCHIG00000015009) ADAMTS10 (ENSCHIG00000025021) ACTL9 (ENSCHIG00000009183) OR2Z1 (ENSCHIG00000009977) ENSCHIG00000015823 ENSCHIG00000015838 ENSCHIG00000022235 ENSCHIG00000026329 ADGRE1 (ENSCHIG00000021647) VAV1 (ENSCHIG00000011155) SH2D3A (ENSCHIG00000025393) Suina ANCESTRAL SPECIES ENSGT00940000163126 #22 Pig MODERN SPECIES 10 MAP2K7 (ENSSSCG00000013588) TGFBR3L (ENSSSCG00000040598) SNAPC2 (ENSSSCG00000013589) CTXN1 (ENSSSCG00000036220) TIMM44 (ENSSSCG00000013591) ELAVL1 (ENSSSCG00000013592) CCL25 (ENSSSCG00000013593) FBN3 (ENSSSCG00000013594) ENSSSCG00000063352 CERS4 (ENSSSCG00000013595) CD320 (ENSSSCG00000032833) NDUFA7 (ENSSSCG00000041220) #17 RPS28 (ENSSSCG00000013597) #18 KANK3 (ENSSSCG00000013598) ANGPTL4 (ENSSSCG00000013599) #21 RAB11B (ENSSSCG00000013600) #22 MARCHF2 (ENSSSCG00000013601) #23 HNRNPM (ENSSSCG00000013602) PRAM1 (ENSSSCG00000060035) ZNF414 (ENSSSCG00000024810) MYO1F (ENSSSCG00000013604) ADAMTS10 (ENSSSCG00000026994) NFILZ (ENSSSCG00000055667) ACTL9 (ENSSSCG00000013605) OR2Z1 (ENSSSCG00000013606) ENSSSCG00000013607 ZNF558 (ENSSSCG00000029035) ENSSSCG00000013609 ENSSSCG00000046648 ENSSSCG00000052520 ENSSSCG00000013610 Laurasiatheria_b ANCESTRAL SPECIES 18 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00950000183005.b.c.b ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 ENSGT00940000154130.a.a.a Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000163126 #22 Chiroptera ANCESTRAL SPECIES ENSGT00940000163126 #22 Microchiroptera ANCESTRAL SPECIES ENSGT00940000163126 #22 Microbat MODERN SPECIES 1558 ENSMLUG00000029231 CERS4 (ENSMLUG00000003180) CD320 (ENSMLUG00000003185) NDUFA7 (ENSMLUG00000003194) #17 RPS28 (ENSMLUG00000023621) #18 KANK3 (ENSMLUG00000029771) ANGPTL4 (ENSMLUG00000023180) #21 ENSMLUG00000006677 #22 MARCHF2 (ENSMLUG00000006686) #23 ENSMLUG00000006696 PRAM1 (ENSMLUG00000006719) ZNF414 (ENSMLUG00000006742) MYO1F (ENSMLUG00000006755) ADAMTS10 (ENSMLUG00000008143) Carnivora ANCESTRAL SPECIES 6 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00950000183005.b.c.b ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 ENSGT00940000154130.a.a.a Caniformia ANCESTRAL SPECIES ENSGT00940000163126 #22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000163126 #22 Ursidae ANCESTRAL SPECIES ENSGT00940000163126 #22 Ursus ANCESTRAL SPECIES ENSGT00940000163126 #22 American black bear MODERN SPECIES 3278 ENSUAMG00000006655 ANGPTL4 (ENSUAMG00000006653) #21 ENSUAMG00000006639 #22 MARCHF2 (ENSUAMG00000006638) #23 HNRNPM (ENSUAMG00000005710) PRAM1 (ENSUAMG00000005686) ZNF414 (ENSUAMG00000005683) MYO1F (ENSUAMG00000005512) Canidae ANCESTRAL SPECIES ENSGT00940000163126 #22 Canis_lupus ANCESTRAL SPECIES ENSGT00940000163126 #22 Dog MODERN SPECIES 12 LRRC8E (ENSCAFG00845028670) MAP2K7 (ENSCAFG00845028690) SNAPC2 (ENSCAFG00845028803) CTXN1 (ENSCAFG00845028842) TIMM44 (ENSCAFG00845028877) ENSCAFG00845028908 CCL25 (ENSCAFG00845028954) FBN3 (ENSCAFG00845029156) CERS4 (ENSCAFG00845029643) ENSCAFG00845029681 ENSCAFG00845029699 NDUFA7 (ENSCAFG00845029721) #17 RPS28 (ENSCAFG00845005920) #18 KANK3 (ENSCAFG00845005960) ANGPTL4 (ENSCAFG00845006010) #21 RAB11B (ENSCAFG00845006072) #22 MARCHF2 (ENSCAFG00845006157) #23 HNRNPM (ENSCAFG00845006315) PRAM1 (ENSCAFG00845006650) ZNF414 (ENSCAFG00845006747) MYO1F (ENSCAFG00845006824) ADAMTS10 (ENSCAFG00845006935) NFILZ (ENSCAFG00845007057) ACTL9 (ENSCAFG00845007084) OR2Z1 (ENSCAFG00845007117) ENSCAFG00845007164 ENSCAFG00845007201 EMR4 (ENSCAFG00845007349) ADGRE1 (ENSCAFG00845007962) VAV1 (ENSCAFG00845008896) SH2D3A (ENSCAFG00845009408) Felidae ANCESTRAL SPECIES 21 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00950000183005.b.c.b ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 ENSGT00940000154130.a.a.a Panthera ANCESTRAL SPECIES 15 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595 ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00950000183005.b.c.b ENSGT00940000162163 ENSGT00940000161354 ENSGT00940000159125 ENSGT00940000154130.a.a.a Tiger MODERN SPECIES 332 TRAPPC5 (ENSPTIG00000011386) CLEC4G (ENSPTIG00000010368) ENSPTIG00000010025 EVI5L (ENSPTIG00000020212) LRRC8E (ENSPTIG00000019015) MAP2K7 (ENSPTIG00000016520) SNAPC2 (ENSPTIG00000016014) TIMM44 (ENSPTIG00000014893) ELAVL1 (ENSPTIG00000013602) ENSPTIG00000015986 ENSPTIG00000015497 NDUFA7 (ENSPTIG00000015048) #17 ENSPTIG00000014735 #18 ENSPTIG00000013659 ANGPTL4 (ENSPTIG00000013109) #21 ENSPTIG00000012555 #22 ENSPTIG00000011939 #24 MARCHF2 (ENSPTIG00000011536) #23 HNRNPM (ENSPTIG00000003024) PRAM1 (ENSPTIG00000021389) ENSPTIG00000020119 MYO1F (ENSPTIG00000015928) ENSPTIG00000008136 ENSPTIG00000020462 ADGRE1 (ENSPTIG00000019039) Euarchontoglires ANCESTRAL SPECIES ENSGT00940000163126 #22 Primates ANCESTRAL SPECIES ENSGT00940000163126 #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000163126 #22 Lemuriformes ANCESTRAL SPECIES 35 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01010000222539 ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000163126 #22 Greater bamboo lemur MODERN SPECIES 661 ENSPSMG00000018506 ENSPSMG00000018511 ENSPSMG00000018523 ENSPSMG00000018533 ENSPSMG00000018544 CD320 (ENSPSMG00000018549) NDUFA7 (ENSPSMG00000018554) #17 RPS28 (ENSPSMG00000018559) #18 KANK3 (ENSPSMG00000018580) ANGPTL4 (ENSPSMG00000018593) #21 ENSPSMG00000018620 #22 MARCHF2 (ENSPSMG00000018649) #23 ENSPSMG00000018706 PRAM1 (ENSPSMG00000018722) ZNF414 (ENSPSMG00000018739) MYO1F (ENSPSMG00000018751) ADAMTS10 (ENSPSMG00000018823) ENSPSMG00000018889 ACTL9 (ENSPSMG00000018890) OR2Z1 (ENSPSMG00000018893) ZNF558 (ENSPSMG00000018899) MBD3L1 (ENSPSMG00000018904) ENSPSMG00000018914 Mouse lemur MODERN SPECIES 16 LRRC8E (ENSMICG00000009651) MAP2K7 (ENSMICG00000009656) TGFBR3L (ENSMICG00000036269) SNAPC2 (ENSMICG00000035695) CTXN1 (ENSMICG00000043197) TIMM44 (ENSMICG00000009680) ELAVL1 (ENSMICG00000009699) ENSMICG00000041953 ENSMICG00000032746 CERS4 (ENSMICG00000014575) CD320 (ENSMICG00000046176) NDUFA7 (ENSMICG00000002422) #17 RPS28 (ENSMICG00000026849) #18 KANK3 (ENSMICG00000029751) ANGPTL4 (ENSMICG00000002426) #21 ENSMICG00000034065 #22 MARCHF2 (ENSMICG00000002527) #23 HNRNPM (ENSMICG00000002532) PRAM1 (ENSMICG00000038402) ZNF414 (ENSMICG00000006194) MYO1F (ENSMICG00000006198) ENSMICG00000006214 ZNF653 (ENSMICG00000034400) ENSMICG00000045642 HOMER3 (ENSMICG00000038004) ENSMICG00000003656 DDX49 (ENSMICG00000003640) COPE (ENSMICG00000003630) TM6SF2 (ENSMICG00000037360) HAPLN4 (ENSMICG00000032572) NCAN (ENSMICG00000036837) Haplorrhini ANCESTRAL SPECIES ENSGT00940000163126 #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000163126 #22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000163126 #22 Cebidae ANCESTRAL SPECIES ENSGT00940000163126 #22 Marmoset MODERN SPECIES 8 ENSCJAG00000070364 ENSCJAG00000080906 ENSCJAG00000073628 ENSCJAG00000079479 ENSCJAG00000078471 ENSCJAG00000073848 #22 ENSCJAG00000085240 ENSCJAG00000077575 ENSCJAG00000076151 TBL1XR1 (ENSCJAG00000002082) ENSCJAG00000075698 ENSCJAG00000061157 ENSCJAG00000071672 NAALADL2 (ENSCJAG00000031211) ENSCJAG00000075956 ENSCJAG00000085114 ENSCJAG00000077913 NLGN1 (ENSCJAG00000002114) ENSCJAG00000081817 SPATA16 (ENSCJAG00000002119) ENSCJAG00000073535 Cebidae_a ANCESTRAL SPECIES ENSGT00940000163126 #22 Capuchin MODERN SPECIES 539 SLC36A2 (ENSCCAG00000021772) SLC36A3 (ENSCCAG00000027595) GM2A (ENSCCAG00000022619) ENSCCAG00000019823 CCDC69 (ENSCCAG00000025195) EIF6 (ENSCCAG00000034662) ENSCCAG00000031429 ENSCCAG00000030197 ANXA6 (ENSCCAG00000037580) ENSCCAG00000025737 ENSCCAG00000019616 GPX3 (ENSCCAG00000022622) ENSCCAG00000033101 #22 ZNF300 (ENSCCAG00000000284) SMIM3 (ENSCCAG00000018371) DCTN4 (ENSCCAG00000034471) RBM22 (ENSCCAG00000033546) MYOZ3 (ENSCCAG00000020650) SYNPO (ENSCCAG00000020535) NDST1 (ENSCCAG00000036525) RPS14 (ENSCCAG00000021090) CD74 (ENSCCAG00000026085) TCOF1 (ENSCCAG00000033791) ENSCCAG00000022936 ARSI (ENSCCAG00000035828) Catarrhini ANCESTRAL SPECIES ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000161659 #24 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 ENSGT00940000154619 Hominoidea ANCESTRAL SPECIES ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000161659 #24 ENSGT00910000148866 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 ENSGT00940000154619 Hominidae ANCESTRAL SPECIES ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 ENSGT00940000154619 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 ENSGT00940000154619 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000154131 ENSGT00940000154619 Pan ANCESTRAL SPECIES 14 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000163012 ENSGT01090000260018.B.a.b ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00940000154619 ENSGT00940000163146 ENSGT00940000162241 ENSGT00940000164306 ENSGT00940000153277.A.a Bonobo MODERN SPECIES 10 LRRC8E (ENSPPAG00000036697) MAP2K7 (ENSPPAG00000039095) TGFBR3L (ENSPPAG00000029580) SNAPC2 (ENSPPAG00000032460) CTXN1 (ENSPPAG00000010442) TIMM44 (ENSPPAG00000043896) ELAVL1 (ENSPPAG00000035262) CCL25 (ENSPPAG00000031289) FBN3 (ENSPPAG00000031224) CERS4 (ENSPPAG00000041286) CD320 (ENSPPAG00000031620) NDUFA7 (ENSPPAG00000043893) #17 RPS28 (ENSPPAG00000028825) #18 ENSPPAG00000033255 ANGPTL4 (ENSPPAG00000034759) #21 ENSPPAG00000028589 #22 MARCHF2 (ENSPPAG00000000150) #23 HNRNPM (ENSPPAG00000039365) ENSPPAG00000040760 MYO1F (ENSPPAG00000031899) ADAMTS10 (ENSPPAG00000040699) ACTL9 (ENSPPAG00000014650) OR2Z1 (ENSPPAG00000018967) ZNF558 (ENSPPAG00000035925) MBD3L1 (ENSPPAG00000016338) OR7G1 (ENSPPAG00000013663) OR7G3 (ENSPPAG00000015342) ZNF317 (ENSPPAG00000034111) ENSPPAG00000030817 ENSPPAG00000033337 OR7D4 (ENSPPAG00000007019) Chimpanzee MODERN SPECIES 10 LRRC8E (ENSPTRG00000010408) MAP2K7 (ENSPTRG00000010409) TGFBR3L (ENSPTRG00000044481) SNAPC2 (ENSPTRG00000042034) CTXN1 (ENSPTRG00000051848) TIMM44 (ENSPTRG00000010412) ELAVL1 (ENSPTRG00000010413) CCL25 (ENSPTRG00000010414) FBN3 (ENSPTRG00000010415) CERS4 (ENSPTRG00000010416) CD320 (ENSPTRG00000010417) NDUFA7 (ENSPTRG00000010418) #17 RPS28 (ENSPTRG00000040141) #18 KANK3 (ENSPTRG00000010419) ANGPTL4 (ENSPTRG00000010420) #21 RAB11B (ENSPTRG00000010422) #22 MARCHF2 (ENSPTRG00000010423) #23 HNRNPM (ENSPTRG00000010424) PRAM1 (ENSPTRG00000010425) ZNF414 (ENSPTRG00000010427) MYO1F (ENSPTRG00000010428) ADAMTS10 (ENSPTRG00000010429) ACTL9 (ENSPTRG00000029143) OR2Z1 (ENSPTRG00000010430) ZNF558 (ENSPTRG00000050215) MBD3L1 (ENSPTRG00000010433) ENSPTRG00000048176 OR7G1 (ENSPTRG00000044391) OR7G3 (ENSPTRG00000050254) ZNF317 (ENSPTRG00000042436) ENSPTRG00000010240 Gorilla MODERN SPECIES 10 PRR36 (ENSGGOG00000001971) LRRC8E (ENSGGOG00000024318) MAP2K7 (ENSGGOG00000012376) TGFBR3L (ENSGGOG00000039729) SNAPC2 (ENSGGOG00000022392) TIMM44 (ENSGGOG00000005220) ELAVL1 (ENSGGOG00000006100) CCL25 (ENSGGOG00000005280) FBN3 (ENSGGOG00000004780) CERS4 (ENSGGOG00000011145) CD320 (ENSGGOG00000000923) NDUFA7 (ENSGGOG00000000924) #17 RPS28 (ENSGGOG00000024725) #18 KANK3 (ENSGGOG00000000926) ANGPTL4 (ENSGGOG00000014506) #21 ENSGGOG00000014516 #22 MARCHF2 (ENSGGOG00000025279) #23 HNRNPM (ENSGGOG00000003498) PRAM1 (ENSGGOG00000003508) ZNF414 (ENSGGOG00000003514) MYO1F (ENSGGOG00000027383) ADAMTS10 (ENSGGOG00000009626) ACTL9 (ENSGGOG00000014253) ENSGGOG00000036817 ZNF558 (ENSGGOG00000043471) MBD3L1 (ENSGGOG00000008272) OR7G1 (ENSGGOG00000015244) OR7G3 (ENSGGOG00000006778) ENSGGOG00000042794 OR7D2 (ENSGGOG00000037214) OR7D4 (ENSGGOG00000043963) Cercopithecidae ANCESTRAL SPECIES 17 ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000161659 #24 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000162241 ENSGT00940000164306 ENSGT00940000153277.A.a Rhinopithecus ANCESTRAL SPECIES 5 ENSGT00940000154382.a.a ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000161659 #24 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000160844.a ENSGT00940000162241 ENSGT00940000153277.A.a ENSGT00940000156425 ENSGT00940000153686 ENSGT00940000163210 ENSGT00940000164004 ENSGT00940000163463 Golden snub-nosed monkey MODERN SPECIES 2705 ENSRROG00000040503 CD320 (ENSRROG00000038178) NDUFA7 (ENSRROG00000041841) #17 KANK3 (ENSRROG00000042744) RPS28 (ENSRROG00000009415) #18 ANGPTL4 (ENSRROG00000029593) #21 ENSRROG00000037812 #22 MARCHF2 (ENSRROG00000045422) #23 ENSRROG00000038240 PRAM1 (ENSRROG00000034408) ZNF414 (ENSRROG00000039297) MYO1F (ENSRROG00000040817) ADAMTS10 (ENSRROG00000041926) ZNF558 (ENSRROG00000036466) ZNF317 (ENSRROG00000045625) OR7E24 (ENSRROG00000042290) ENSRROG00000042305 ZNF699 (ENSRROG00000033631) Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000161659 #24 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00440000039287 ENSGT00940000163044 ENSGT00940000162241 ENSGT00940000164306 ENSGT00940000153686 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000161659 #24 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00940000163044 ENSGT00940000162241 ENSGT00940000164306 ENSGT00940000153686 ENSGT00940000153277.A.a Macaca ANCESTRAL SPECIES ENSGT00940000163126 #22 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000164709.a.b.b.a.a.b.b.a.b.a.b.a ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00940000163044 ENSGT00940000162241 ENSGT00940000153686.u ENSGT00940000153686.v ENSGT00940000153277.A.a Crab-eating macaque MODERN SPECIES 10 LRRC8E (ENSMFAG00000038156) MAP2K7 (ENSMFAG00000031756) ENSMFAG00000050179 SNAPC2 (ENSMFAG00000034273) TIMM44 (ENSMFAG00000037515) ENSMFAG00000064115 ELAVL1 (ENSMFAG00000040787) CCL25 (ENSMFAG00000034081) FBN3 (ENSMFAG00000035371) CERS4 (ENSMFAG00000044404) ENSMFAG00000053865 CD320 (ENSMFAG00000013824) RPS28 (ENSMFAG00000042430) #18 ANGPTL4 (ENSMFAG00000003517) #21 ENSMFAG00000063041 ENSMFAG00000003654 #22 MARCHF2 (ENSMFAG00000064335) #23 HNRNPM (ENSMFAG00000037617) ENSMFAG00000062631 MYO1F (ENSMFAG00000050770) ADAMTS10 (ENSMFAG00000040772) ENSMFAG00000056242 NFILZ (ENSMFAG00000065017) ACTL9 (ENSMFAG00000051542) ZNF558 (ENSMFAG00000036165) OR1M1 (ENSMFAG00000056405) ZNF317 (ENSMFAG00000036858) ENSMFAG00000061840 ENSMFAG00000044718 OR7E24 (ENSMFAG00000053134) ZNF699 (ENSMFAG00000003916) Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT00940000159311.c ENSGT00940000158914 ENSGT00530000063861.a ENSGT00390000017407 ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000155528 ENSGT01100000263557.A.b.a.a.a.a ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b ENSGT00730000111436 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000164108.b ENSGT00940000163012 ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00940000163044 ENSGT00940000162241 ENSGT00940000164306 ENSGT00940000153277.A.a ENSGT00940000156425 Cercopithecinae_d ANCESTRAL SPECIES 8 ENSGT00390000006553 #17 ENSGT00910000144227.s.a.h #18 ENSGT00940000161178 ENSGT00940000159478 #21 ENSGT00940000163126 #22 ENSGT00940000158995 #23 ENSGT00940000154595.n ENSGT00530000063460.B ENSGT00390000006876 ENSGT00940000158870 ENSGT00940000158404 ENSGT00940000160844.a ENSGT00950000183005.b.c.a ENSGT00940000162241 ENSGT00940000156425 ENSGT00940000163210 ENSGT00940000164004 ENSGT00940000163463 ENSGT00940000162380 ENSGT00940000164683 Sooty mangabey MODERN SPECIES 212 NDUFA7 (ENSCATG00000037978) #17 RPS28 (ENSCATG00000014458) #18 KANK3 (ENSCATG00000044233) ANGPTL4 (ENSCATG00000040565) #21 ENSCATG00000029188 #22 MARCHF2 (ENSCATG00000037535) #23 HNRNPM (ENSCATG00000035478) PRAM1 (ENSCATG00000036215) ZNF414 (ENSCATG00000030573) MYO1F (ENSCATG00000040319) ADAMTS10 (ENSCATG00000037858) ZNF558 (ENSCATG00000044831) ZNF317 (ENSCATG00000035588) ENSCATG00000037863 ZNF699 (ENSCATG00000014891) Drill MODERN SPECIES 1486 NDUFA7 (ENSMLEG00000037260) #17 RPS28 (ENSMLEG00000036014) #18 ENSMLEG00000037944 ENSMLEG00000029592 ANGPTL4 (ENSMLEG00000030718) #21 ENSMLEG00000030601 #22 MARCHF2 (ENSMLEG00000029114) #23 HNRNPM (ENSMLEG00000042113) PRAM1 (ENSMLEG00000040464) ZNF414 (ENSMLEG00000037008) MYO1F (ENSMLEG00000029789) ADAMTS10 (ENSMLEG00000033505) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000163126 #22 Tree shrew MODERN SPECIES 4567 ENSTBEG00000000667 #22 Glires ANCESTRAL SPECIES ENSGT00940000163126 #22 Lagomorpha ANCESTRAL SPECIES ENSGT00940000163126 #22 Pika MODERN SPECIES 4171 ENSOPRG00000003214 ENSOPRG00000003233 #21 ENSOPRG00000003261 #22 Rodentia ANCESTRAL SPECIES ENSGT00940000163126 #22 Rodentia_B ANCESTRAL SPECIES ENSGT00940000163126 #22 Myomorpha ANCESTRAL SPECIES ENSGT00940000163126 #22 Muroidea ANCESTRAL SPECIES ENSGT00940000163126 #22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000163126 #22 Murinae ANCESTRAL SPECIES ENSGT00940000163126 #22 Rat MODERN SPECIES 17 LOC120093094 (ENSRNOG00000065103) LOC120093114 (ENSRNOG00000071034) LOC300308 (ENSRNOG00000048230) Vom2r57 (ENSRNOG00000039136) Vom2r57 (ENSRNOG00000063758) ENSRNOG00000067350 ENSRNOG00000066006 RGD1565071 (ENSRNOG00000065381) LOC102551633 (ENSRNOG00000050249) LOC108348097 (ENSRNOG00000026976) Cd320 (ENSRNOG00000006901) Rps28 (ENSRNOG00000042886) #18 Kank3 (ENSRNOG00000007230) Angptl4 (ENSRNOG00000007545) #21 RGD1564744 (ENSRNOG00000011955) Rab11b (ENSRNOG00000007648) #22 Marchf2 (ENSRNOG00000007769) #23 Hnrnpm (ENSRNOG00000007921) Pram1 (ENSRNOG00000008378) Myo1f (ENSRNOG00000008409) Adamts10 (ENSRNOG00000008857) Nfilz (ENSRNOG00000063608) Actl9 (ENSRNOG00000049571) AABR07056013.1 (ENSRNOG00000009072) Zfp494 (ENSRNOG00000042772) Vom1r108 (ENSRNOG00000048787) Vom1r107 (ENSRNOG00000042090) Vom1r106 (ENSRNOG00000043367) Zscan4f (ENSRNOG00000028214) RGD1560291 (ENSRNOG00000059733) ENSRNOG00000065067 Coelacanth MODERN SPECIES 274 ENSLACG00000014322 #27 ENSLACG00000014893 #26 ENSLACG00000022153 LONP1 (ENSLACG00000015087) #25 RPL36 (ENSLACG00000015161) LMNB2 (ENSLACG00000015242) TMPRSS9 (ENSLACG00000015402) SPPL2B (ENSLACG00000015569) LSM7 (ENSLACG00000015700) ENSLACG00000015723 ENSLACG00000015739 FBN3 (ENSLACG00000016154) ENSLACG00000016511 TIMM44 (ENSLACG00000016754) HNRNPM (ENSLACG00000016814) rab11bb (ENSLACG00000016857) #22 MARCHF2 (ENSLACG00000022426) #23 RAB11B (ENSLACG00000016974) #24 ANGPTL4 (ENSLACG00000017018) #21 ENSLACG00000017186 kank3 (ENSLACG00000017209) #19 NDUFA7 (ENSLACG00000017258) #17 ENSLACG00000017294 #13 ENSLACG00000017317 ENSLACG00000017420 #11 admp (ENSLACG00000017430) pnhd (ENSLACG00000017449) POLE4 (ENSLACG00000017480) ENSLACG00000017484 tspan37 (ENSLACG00000017588) ELAVL1 (ENSLACG00000017607) Actinopterygii ANCESTRAL SPECIES 288 ENSGT00940000163715.b ENSGT01030000234515.a.b.b ENSGT00950000183158.B.b ENSGT00940000165840 ENSGT00940000155273 ENSGT00510000047872 ENSGT00950000183158.B.a.a ENSGT00940000154412.C ENSGT00390000000051 ENSGT00940000154595 ENSGT00940000163126 #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 Neopterygii ANCESTRAL SPECIES 67 ENSGT00510000047872 ENSGT00940000158753 ENSGT00940000159993 ENSGT00940000155138 ENSGT00940000164686 ENSGT00940000163715.b ENSGT01030000234515.a.b.b ENSGT00950000183158.A ENSGT00940000154412.C.d ENSGT00390000000051 ENSGT00940000154595 ENSGT00940000163126 #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258 ENSGT00940000160036 ENSGT00950000183110.b.a ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000159946 ENSGT00390000012913.a ENSGT00940000160926 ENSGT00940000158649 ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 72 ENSGT00940000155138 ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 ENSGT00940000163715.b ENSGT01030000234515.a.b.b.a ENSGT00950000183158.A ENSGT00940000154412.C.d ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c ENSGT00390000000051 ENSGT00940000154595 ENSGT00940000163126.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000159258.c ENSGT00940000165680.A ENSGT00940000170739 ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 38 ENSGT00940000157050.i.b ENSGT00940000164804.b ENSGT00940000160620 ENSGT00940000164492.a.b ENSGT00940000158959.b.a ENSGT00940000162806.b.b ENSGT00610000086173 ENSGT00390000015368.a.a.d ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00730000111231 ENSGT00940000158081.o.a ENSGT00940000153593 ENSGT00730000113192 ENSGT00510000053055 ENSGT00940000177177 ENSGT00940000159994 ENSGT01030000236342 ENSGT00390000000289 ENSGT00940000161021.a.a ENSGT00390000013329 ENSGT00390000003821 ENSGT00940000160280.c ENSGT00940000160580.a Otomorpha ANCESTRAL SPECIES 5 ENSGT00940000164495.c.a ENSGT00940000155438.a ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a ENSGT00940000165007.a ENSGT00940000154779.a.a.c ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000165680.A ENSGT00940000170739 ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.d ENSGT00940000159946.h ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946.g ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Otophysi ANCESTRAL SPECIES 52 ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a ENSGT00940000165007.a ENSGT00940000154779.a.a.c ENSGT00940000181505 ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.b ENSGT00940000153593.h.a.a ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000170739 ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946.g ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 ENSGT00940000160699 Characiphysae ANCESTRAL SPECIES 34 ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a ENSGT00940000165007.a ENSGT00940000154779.a.a.c ENSGT00940000181505 ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.b ENSGT00940000153593.h.a.a ENSGT00940000153593.h.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000170739 ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.d ENSGT00940000159946.h ENSGT00390000012913.a.a ENSGT00940000158649.a.b ENSGT00940000158163.a ENSGT00390000002913 ENSGT00940000154662.d ENSGT00940000159179.g ENSGT00940000161905.b ENSGT00940000162613 ENSGT00950000183005.b.a Channel catfish MODERN SPECIES 12 tcf3a (ENSIPUG00000019252) ENSIPUG00000019406 MBD3 (ENSIPUG00000019419) MEX3D (ENSIPUG00000019444) UNC13A (ENSIPUG00000019460) btbd2 (ENSIPUG00000019506) Armc6 (ENSIPUG00000019528) slc25a42 (ENSIPUG00000019552) Ncan (ENSIPUG00000019592) tm6sf2 (ENSIPUG00000019656) sbno2 (ENSIPUG00000019672) ARHGAP45 (ENSIPUG00000019753) polr2ea (ENSIPUG00000019801) gpx4b (ENSIPUG00000019856) PIP5K1C (ENSIPUG00000019881) rab11bb (ENSIPUG00000019927) #22 ENSIPUG00000019970 HOMER3 (ENSIPUG00000005017) uba52 (ENSIPUG00000005058) UPF1 (ENSIPUG00000005108) Pgpep1 (ENSIPUG00000005216) jund (ENSIPUG00000005241) Lox (ENSIPUG00000005255) nmrk2 (ENSIPUG00000005267) ATCAY (ENSIPUG00000005280) cplx4c (ENSIPUG00000005311) rx2 (ENSIPUG00000005326) CALR (ENSIPUG00000005374) ENSIPUG00000005411 ENSIPUG00000005421 ENSIPUG00000006478 Characiphysae_b ANCESTRAL SPECIES 57 ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a ENSGT00940000165007.a ENSGT00940000154779.a.a.c ENSGT00940000181505 ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.b ENSGT00940000153593.h.a.a ENSGT00940000153593.h.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000170739 ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.d ENSGT00940000159946.h ENSGT00390000012913.a.a ENSGT00940000158649.a.b ENSGT00940000158163.a ENSGT00390000002913 ENSGT00940000154662.d ENSGT00940000159179.g ENSGT00940000161905.b ENSGT00940000162613 ENSGT00950000183005.b.a Characoidei ANCESTRAL SPECIES 45 ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a ENSGT00940000165007.a ENSGT00940000154779.a.a.c ENSGT00940000181505 ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.b ENSGT00940000153593.h.a.a ENSGT00940000153593.h.b.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.d ENSGT00940000159946.h ENSGT00390000012913.a.a ENSGT00940000158649.a.b ENSGT00940000158163.a ENSGT00390000002913 ENSGT00940000154662.d ENSGT00940000159179.g ENSGT00940000161905.b ENSGT00940000162613 ENSGT00950000183005.b.a ENSGT00390000018299.b Mexicana tetra MODERN SPECIES 8 klf2b (ENSAMXG00000038341) ENSAMXG00000039725 ENSAMXG00000015116 rx2 (ENSAMXG00000041205) cplx4c (ENSAMXG00000041674) nmrk2 (ENSAMXG00000034655) loxl5b (ENSAMXG00000019021) jund (ENSAMXG00000026133) pgpep1 (ENSAMXG00000038090) upf1 (ENSAMXG00000042187) ENSAMXG00000018993 UBA52 (ENSAMXG00000037850) ENSAMXG00000018965 CTXN1 (ENSAMXG00000026132) TIMM44 (ENSAMXG00000018942) rab11bb (ENSAMXG00000042655) #22 PIP5K1C (ENSAMXG00000041140) gpx4b (ENSAMXG00000041988) POLR2E (ENSAMXG00000018915) ARHGAP45 (ENSAMXG00000018912) sbno2a (ENSAMXG00000018868) tm6sf2a (ENSAMXG00000040821) ENSAMXG00000038802 slc25a42 (ENSAMXG00000006680) ARMC6 (ENSAMXG00000006664) eef2b (ENSAMXG00000006645) BTBD2 (ENSAMXG00000006626) UNC13A (ENSAMXG00000017978) MEX3D (ENSAMXG00000042500) mbd3a (ENSAMXG00000041394) UQCR11 (ENSAMXG00000035427) Electric eel MODERN SPECIES 471 ENSEEEG00000000338 ENSEEEG00000000320 rx2 (ENSEEEG00000000298) cplx4c (ENSEEEG00000000270) ATCAY (ENSEEEG00000000232) nmrk2 (ENSEEEG00000000205) loxl5b (ENSEEEG00000000155) jund (ENSEEEG00000000093) pgpep1 (ENSEEEG00000000084) upf1 (ENSEEEG00000000063) HOMER3 (ENSEEEG00000022969) uba52 (ENSEEEG00000022967) ENSEEEG00000022960 CTXN1 (ENSEEEG00000022955) TIMM44 (ENSEEEG00000022954) rab11bb (ENSEEEG00000022947) #22 PIP5K1C (ENSEEEG00000022945) ENSEEEG00000022944 gpx4b (ENSEEEG00000022942) POLR2E (ENSEEEG00000022939) ARHGAP45 (ENSEEEG00000022933) sbno2a (ENSEEEG00000022924) tm6sf2a (ENSEEEG00000022912) ENSEEEG00000022908 Cyprinoidei ANCESTRAL SPECIES 17 ENSGT00940000163917.a.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a ENSGT00940000165007.a ENSGT00940000158081.o.b ENSGT00940000153593.h.a.a ENSGT00940000154779.a.a.c ENSGT00940000181505 ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413 ENSGT00940000158081.o.a.f ENSGT00940000153593.h.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000170739 ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946.g ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 ENSGT00940000160699 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 324 ENSGT00940000155438.a.r ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000163917.a.b.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a.a ENSGT00940000165007.a.b ENSGT00940000154779.a.a.c.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c.b ENSGT00940000157413.i ENSGT00940000158081.o.b.b ENSGT00940000153593.h.b.b ENSGT00940000153593.h.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a.a ENSGT00940000163126.a.a.a.a #22 ENSGT00940000159258.c.b ENSGT00940000161913.d.a.b ENSGT00940000154412.C.c.a.b ENSGT00940000163126.a.a.a.b #22 ENSGT00940000159258.c.a ENSGT00940000161913.d.a.a ENSGT00390000013841.ib ENSGT00950000183110.b.a.d ENSGT00940000159946.h.b ENSGT00390000012913.a.a.d ENSGT00940000158649.a.b.a.b ENSGT00940000158163.a.a ENSGT00940000159946.h.a ENSGT00390000012913.a.a.c ENSGT00940000158649.a.b.a.a Goldfish DUPLICATION Goldfish MODERN SPECIES 19 tm6sf2a (ENSCARG00000010494) ENSCARG00000010468 ENSCARG00000010458 slc25a42 (ENSCARG00000010448) ARMC6 (ENSCARG00000010432) ENSCARG00000010425 eef2b (ENSCARG00000010095) BTBD2 (ENSCARG00000010021) UBA52 (ENSCARG00000010005) HOMER3 (ENSCARG00000009993) upf1 (ENSCARG00000009967) pgpep1 (ENSCARG00000009948) jund (ENSCARG00000009940) ENSCARG00000009932 CTXN1 (ENSCARG00000009924) rab11bb (ENSCARG00000009876) #22 ENSCARG00000009536 ENSCARG00000009474 gpx4b (ENSCARG00000009457) BTBD2 (ENSCARG00000009449) UNC13A (ENSCARG00000008314) MEX3D (ENSCARG00000008158) mbd3a (ENSCARG00000008142) UQCR11 (ENSCARG00000008133) tcf3a (ENSCARG00000008083) map2k2b (ENSCARG00000008010) ENSCARG00000008001 ENSCARG00000007994 ONECUT3 (ENSCARG00000007986) ENSCARG00000007980 sf3a2 (ENSCARG00000007972) Goldfish MODERN SPECIES 19 klf2b (ENSCARG00000021223) ENSCARG00000021214 ENSCARG00000020750 rx2 (ENSCARG00000020728) ATCAY (ENSCARG00000020674) nmrk2 (ENSCARG00000011532) ENSCARG00000011526 loxl5b (ENSCARG00000011513) jund (ENSCARG00000011501) pgpep1 (ENSCARG00000011489) upf1 (ENSCARG00000011474) HOMER3 (ENSCARG00000011431) uba52 (ENSCARG00000011408) ENSCARG00000011400 CTXN1 (ENSCARG00000011388) rab11bb (ENSCARG00000011327) #22 ENSCARG00000011245 gpx4b (ENSCARG00000011225) ARHGAP45 (ENSCARG00000011156) sbno2a (ENSCARG00000010535) tm6sf2a (ENSCARG00000010494) ENSCARG00000010468 ENSCARG00000010458 slc25a42 (ENSCARG00000010448) ARMC6 (ENSCARG00000010432) ENSCARG00000010425 eef2b (ENSCARG00000010095) BTBD2 (ENSCARG00000010021) UBA52 (ENSCARG00000010005) HOMER3 (ENSCARG00000009993) upf1 (ENSCARG00000009967) Cyprininae_a ANCESTRAL SPECIES 59 ENSGT00940000160466.b ENSGT00940000155363.w ENSGT00940000164495.c.a.a ENSGT00940000155438.a.q ENSGT00950000182915.b.b.a.b.c.b.a ENSGT00940000163917.a.b.b ENSGT00940000158364.a.b ENSGT00940000165007.a.a ENSGT00940000154779.a.a.c.b ENSGT00390000015368.a.a.c.a ENSGT00940000157413.j ENSGT00940000158081.o.b.a ENSGT00940000153593.h.b.a ENSGT01030000234515.a.b.b.b.a ENSGT00940000154412.C.c.a.a ENSGT00940000163126.a.a.a.a #22 ENSGT00940000159258.c.b ENSGT00940000161913.d.a.b ENSGT00950000183110.b.a.d.b ENSGT00940000159946.h.a ENSGT00390000012913.a.a.c ENSGT00940000158649.a.b.a.a ENSGT00940000158163.a.b ENSGT00390000002913 ENSGT00940000154662.d.u ENSGT00940000159179.g.b ENSGT00940000161905.b.b ENSGT00940000162613.f ENSGT00950000183005.b.a.b ENSGT00940000157036.e.b.h ENSGT00940000153487.b.a.s.b.a Common carp reference MODERN SPECIES 29 ENSCCRG00000007837 ENSCCRG00000049877 klf2b (ENSCCRG00000006413) ENSCCRG00000053619 ENSCCRG00000076172 rx2 (ENSCCRG00000007794) ENSCCRG00000051906 nmrk2 (ENSCCRG00000051935) loxl5b (ENSCCRG00000074189) pgpep1 (ENSCCRG00000007790) upf1 (ENSCCRG00000007785) ENSCCRG00000007775 uba52 (ENSCCRG00000007704) ENSCCRG00000067269 ENSCCRG00000071775 rab11bb (ENSCCRG00000003636) #22 ENSCCRG00000037725 gpx4b (ENSCCRG00000058980) ENSCCRG00000022982 sbno2a (ENSCCRG00000078397) tm6sf2a (ENSCCRG00000061917) ENSCCRG00000001521 slc25a42 (ENSCCRG00000082753) ENSCCRG00000035161 ENSCCRG00000014462 ENSCCRG00000070880 MEX3D (ENSCCRG00000055684) eef2b (ENSCCRG00000064570) ENSCCRG00000055311 mbd3a (ENSCCRG00000035518) tcf3a (ENSCCRG00000035581) Cyprininae ANCESTRAL SPECIES 324 ENSGT00940000158364.a.a ENSGT00940000165007.a.b ENSGT00940000154779.a.a.c.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c.b ENSGT00940000157413.i ENSGT00940000158081.o.b.b ENSGT00940000153593.h.b.b ENSGT00940000153593.h.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a.a ENSGT00940000163126.a.a.a.a #22 ENSGT00940000159258.c.b ENSGT00940000161913.d.a.b ENSGT00940000154412.C.c.a.b ENSGT00940000163126.a.a.a.b #22 ENSGT00940000159258.c.a ENSGT00940000161913.d.a.a ENSGT00390000013841.ib ENSGT00950000183110.b.a.d ENSGT00940000159946.h.b ENSGT00390000012913.a.a.d ENSGT00940000158649.a.b.a.b ENSGT00940000158163.a.a ENSGT00940000159946.h.a ENSGT00390000012913.a.a.c ENSGT00940000158649.a.b.a.a ENSGT00940000158163.a.b ENSGT00390000002913 Goldfish DUPLICATION Goldfish MODERN SPECIES 11 ENSCARG00000001476 BTBD2 (ENSCARG00000001324) ENSCARG00000001319 UBA52 (ENSCARG00000001315) ENSCARG00000001299 upf1 (ENSCARG00000001254) pgpep1 (ENSCARG00000001246) jund (ENSCARG00000001240) loxl5b (ENSCARG00000001231) nmrk2 (ENSCARG00000001230) ATCAY (ENSCARG00000001223) cplx4c (ENSCARG00000001220) rx2 (ENSCARG00000001217) ENSCARG00000001214 CTXN1 (ENSCARG00000001212) rab11bb (ENSCARG00000001208) #22 ENSCARG00000001128 gpx4b (ENSCARG00000001104) POLR2E (ENSCARG00000001077) ARHGAP45 (ENSCARG00000000949) sbno2a (ENSCARG00000000858) BTBD2 (ENSCARG00000000748) ARMC6 (ENSCARG00000000725) slc25a42 (ENSCARG00000000711) eef2b (ENSCARG00000000613) epb41l3b (ENSCARG00000000497) ENSCARG00000000462 ENSCARG00000000455 cirbpa (ENSCARG00000000448) ENSCARG00000000434 PRKAB2 (ENSCARG00000000420) Goldfish MODERN SPECIES 11 ENSCARG00000001476 MEX3D (ENSCARG00000003200) ENSCARG00000003211 UQCR11 (ENSCARG00000003217) tcf3a (ENSCARG00000003229) pias4b (ENSCARG00000003249) ONECUT3 (ENSCARG00000003254) ENSCARG00000003257 sf3a2 (ENSCARG00000003259) plekhj1 (ENSCARG00000003264) ISYNA1 (ENSCARG00000003281) ENSCARG00000003306 ENSCARG00000003312 ENSCARG00000003318 CTXN1 (ENSCARG00000003328) rab11bb (ENSCARG00000003333) #22 PIP5K1C (ENSCARG00000003343) gpx4b (ENSCARG00000003379) POLR2E (ENSCARG00000003414) ARHGAP45 (ENSCARG00000003562) sbno2a (ENSCARG00000003640) ENSCARG00000003678 APCDD1 (ENSCARG00000003686) vapal (ENSCARG00000003702) foxl2b (ENSCARG00000003716) pnp5b (ENSCARG00000003722) ENSCARG00000003764 ENSCARG00000004235 fcer1gl (ENSCARG00000004239) ENSCARG00000004246 ENSCARG00000004267 Cyprininae_a ANCESTRAL SPECIES 162 ENSGT00940000164495.c.a.b ENSGT00940000155438.a.r ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000163917.a.b.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000158364.a.a ENSGT00940000165007.a.b ENSGT00940000154779.a.a.c.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c.b ENSGT00940000157413.i ENSGT00940000158081.o.b.b ENSGT00940000153593.h.b.b ENSGT01030000234515.a.b.b.b.b ENSGT00940000154412.C.c.a.b ENSGT00940000163126.a.a.a.b #22 ENSGT00940000159258.c.a ENSGT00940000161913.d.a.a ENSGT00390000013841.ib ENSGT00950000183110.b.a.d.a ENSGT00940000159946.h.b ENSGT00390000012913.a.a.d ENSGT00940000158649.a.b.a.b ENSGT00940000158163.a.a Common carp reference MODERN SPECIES 21 klf2b (ENSCCRG00000011217) ENSCCRG00000081626 ENSCCRG00000019801 rx2 (ENSCCRG00000075008) cplx4c (ENSCCRG00000079094) ENSCCRG00000045180 nmrk2 (ENSCCRG00000045258) loxl5b (ENSCCRG00000045132) jund (ENSCCRG00000035101) pgpep1 (ENSCCRG00000073516) upf1 (ENSCCRG00000051892) ENSCCRG00000058571 uba52 (ENSCCRG00000016171) ENSCCRG00000026536 ENSCCRG00000073664 rab11bb (ENSCCRG00000000721) #22 ENSCCRG00000045930 gpx4b (ENSCCRG00000071825) ENSCCRG00000012408 ARHGAP45 (ENSCCRG00000012460) sbno2a (ENSCCRG00000020152) tm6sf2a (ENSCCRG00000073164) ENSCCRG00000065346 slc25a42 (ENSCCRG00000080212) ENSCCRG00000011585 eef2b (ENSCCRG00000035228) ENSCCRG00000035403 ENSCCRG00000039392 MEX3D (ENSCCRG00000058664) ENSCCRG00000079293 tcf3a (ENSCCRG00000035505) Cyprininae ANCESTRAL SPECIES ENSGT00940000163126.a.a.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000163126.a.a.b #22 Golden-line barbel MODERN SPECIES 455 ENSSGRG00000007642 ENSSGRG00000007137 LPL (ENSSGRG00000006955) ap1m1 (ENSSGRG00000006676) klf2b (ENSSGRG00000006665) ENSSGRG00000006659 ENSSGRG00000005235 ATCAY (ENSSGRG00000005215) nmrk2 (ENSSGRG00000004999) jund (ENSSGRG00000004993) pgpep1 (ENSSGRG00000004992) upf1 (ENSSGRG00000004701) HOMER3 (ENSSGRG00000004689) ENSSGRG00000004686 CTXN1 (ENSSGRG00000004684) rab11bb (ENSSGRG00000004582) #22 ENSSGRG00000002108 gpx4b (ENSSGRG00000002092) ARHGAP45 (ENSSGRG00000002091) sbno2a (ENSSGRG00000001866) tm6sf2a (ENSSGRG00000001851) ENSSGRG00000001845 slc25a42 (ENSSGRG00000001842) ARMC6 (ENSSGRG00000001841) eef2b (ENSSGRG00000000497) BTBD2 (ENSSGRG00000000457) MEX3D (ENSSGRG00000000455) ENSSGRG00000000377 tcf3a (ENSSGRG00000000322) map2k2b (ENSSGRG00000000219) ENSSGRG00000000191 Zebrafish MODERN SPECIES 11 calr3b (ENSDARG00000102808) rx2 (ENSDARG00000040321) cplx4c (ENSDARG00000094889) ATCAY (ENSDARG00000059781) ENSDARG00000112703 nmrk2 (ENSDARG00000067848) loxl5b (ENSDARG00000076904) ENSDARG00000097617 jund (ENSDARG00000067850) pgpep1 (ENSDARG00000054666) upf1 (ENSDARG00000016302) ENSDARG00000102532 uba52 (ENSDARG00000041435) ENSDARG00000018619 ctxn1 (ENSDARG00000113270) rab11bb (ENSDARG00000090086) #22 PIP5K1C (ENSDARG00000100313) gpx4b (ENSDARG00000076836) POLR2E (ENSDARG00000074274) ARHGAP45 (ENSDARG00000052496) sbno2a (ENSDARG00000098801) tm6sf2a (ENSDARG00000105208) ENSDARG00000115552 slc25a42 (ENSDARG00000099368) ARMC6 (ENSDARG00000103770) eef2b (ENSDARG00000100371) BTBD2 (ENSDARG00000104653) mbd3a (ENSDARG00000061774) tcf3a (ENSDARG00000005915) map2k2b (ENSDARG00000068918) pias4b (ENSDARG00000042215) Clupeiformes ANCESTRAL SPECIES 177 ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000159258.c ENSGT00940000161913 ENSGT00390000013841 ENSGT00950000183110.b.a.d ENSGT00940000159946.h ENSGT00390000012913.a.a ENSGT00940000158649.a.b ENSGT00940000158163.a ENSGT00390000002913 ENSGT00390000014810.b.c ENSGT00390000012198.b.d ENSGT00390000004097.a.f ENSGT00390000000719 ENSGT00940000165622.b ENSGT00510000049027.d Denticle herring MODERN SPECIES 14 ENSDCDG00000000447 SEMA6B (ENSDCDG00000000459) abhd17aa (ENSDCDG00000000479) ENSDCDG00000000502 PTPRS (ENSDCDG00000001350) FEM1A (ENSDCDG00000020218) ENSDCDG00000020225 ENSDCDG00000020277 ENSDCDG00000020281 ENSDCDG00000020282 ENSDCDG00000020284 PRKAB2 (ENSDCDG00000020287) ENSDCDG00000020289 CTXN1 (ENSDCDG00000020291) TIMM44 (ENSDCDG00000020293) rab11bb (ENSDCDG00000020298) #22 PIP5K1C (ENSDCDG00000020330) gpx4b (ENSDCDG00000021692) polr2eb (ENSDCDG00000021709) ARHGAP45 (ENSDCDG00000021926) sbno2a (ENSDCDG00000021954) tm6sf2a (ENSDCDG00000021974) ENSDCDG00000021977 slc25a42 (ENSDCDG00000022012) ARMC6 (ENSDCDG00000022034) ENSDCDG00000022030 ARMC6 (ENSDCDG00000022040) ENSDCDG00000022049 MAU2 (ENSDCDG00000022067) GATAD2A (ENSDCDG00000022185) NDUFA13 (ENSDCDG00000022188) Euteleosteomorpha ANCESTRAL SPECIES 63 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000161729.m.a ENSGT00940000180772 ENSGT00390000011725.d Acanthomorphata ANCESTRAL SPECIES ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00390000010450 ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000163126.b.b #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Tiger tail seahorse MODERN SPECIES 377 si:dkey-56i24.1 (ENSHCOG00000001857) ENSHCOG00000001877 pik3r2 (ENSHCOG00000001948) ifi30 (ENSHCOG00000001984) ENSHCOG00000002081 RAB3A (ENSHCOG00000002125) jund (ENSHCOG00000002134) ENSHCOG00000002184 ENSHCOG00000002352 CTXN1 (ENSHCOG00000002404) rab11bb (ENSHCOG00000002423) #22 MARCHF2 (ENSHCOG00000002433) #23 slc25a36a (ENSHCOG00000002442) spsb4a (ENSHCOG00000002448) clstn2a (ENSHCOG00000002473) NMNAT3 (ENSHCOG00000002482) rbp1.1 (ENSHCOG00000000700) Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000153886.a.b ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Aplocheiloidei ANCESTRAL SPECIES 19 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Mangrove rivulus MODERN SPECIES 64 ptbp2b (ENSKMAG00000009644) dpydb (ENSKMAG00000009544) odr4 (ENSKMAG00000009510) TPR (ENSKMAG00000009412) dusp12 (ENSKMAG00000009384) ENSKMAG00000009357 OLFML2B (ENSKMAG00000009333) ENSKMAG00000009312 ENSKMAG00000009283 kifap3b (ENSKMAG00000009197) PDC (ENSKMAG00000009178) ENSKMAG00000009157 CERS4 (ENSKMAG00000009138) CTXN1 (ENSKMAG00000009121) TIMM44 (ENSKMAG00000009060) rab11bb (ENSKMAG00000009033) #22 MARCHF2 (ENSKMAG00000009002) #23 slc25a36a (ENSKMAG00000008956) spsb4a (ENSKMAG00000008932) clstn2a (ENSKMAG00000008838) NMNAT3 (ENSKMAG00000008800) rbp1.1 (ENSKMAG00000008788) rbp2b (ENSKMAG00000008760) copb2 (ENSKMAG00000008663) dvl3a (ENSKMAG00000008628) ap2m1a (ENSKMAG00000008592) pcyt1aa (ENSKMAG00000008554) ENSKMAG00000008520 DYNC1I2 (ENSKMAG00000008383) slc25a12 (ENSKMAG00000008292) metap1d (ENSKMAG00000008227) Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015023291 CHD7 (ENSNFUG00015023198) PTBP2B (ENSNFUG00015023143) dpydb (ENSNFUG00015023011) C2H1ORF27 (ENSNFUG00015023001) TPRA (ENSNFUG00015021506) prg4a (ENSNFUG00015021413) dusp12 (ENSNFUG00015021389) OLFML2BB (ENSNFUG00015021376) ENSNFUG00015021367 KIFAP3B (ENSNFUG00015020250) OLPD-R (ENSNFUG00015020202) CERS4 (ENSNFUG00015020174) CTXN1 (ENSNFUG00015020167) TIMM44 (ENSNFUG00015020126) Nfu_g_1_020481 (ENSNFUG00015020092) #22 MARCH2 (ENSNFUG00015020081) #23 slc25a36a (ENSNFUG00015020070) SPSB4 (ENSNFUG00015020062) clstn2a (ENSNFUG00015019721) NMNAT3 (ENSNFUG00015019677) NMNAT3 (ENSNFUG00015019671) rbp2b (ENSNFUG00015019621) COPB2 (ENSNFUG00015018238) dvl3a (ENSNFUG00015017928) ENSNFUG00015017891 LINGO3 (ENSNFUG00015017886) ONECUT3 (ENSNFUG00015017880) tcf3a (ENSNFUG00015017863) UQCR11 (ENSNFUG00015017854) mbd3a (ENSNFUG00015017839) Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g Poeciliinae ANCESTRAL SPECIES 6 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g Poecilia ANCESTRAL SPECIES 19 ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000154395.a.a.a.b.a ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g NAME_6 ANCESTRAL SPECIES 228 ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g Sailfin molly MODERN SPECIES 1959 ENSPLAG00000001628 CTXN1 (ENSPLAG00000001608) TIMM44 (ENSPLAG00000001606) rab11bb (ENSPLAG00000001598) #22 MARCHF2 (ENSPLAG00000001587) #23 slc25a36a (ENSPLAG00000001581) Amazon molly MODERN SPECIES 422 tox (ENSPFOG00000004558) ca8 (ENSPFOG00000004700) rab2a (ENSPFOG00000004786) CHD7 (ENSPFOG00000004891) ptbp2b (ENSPFOG00000005646) dpydb (ENSPFOG00000005785) odr4 (ENSPFOG00000005978) ENSPFOG00000006006 prg4a (ENSPFOG00000006768) dusp12 (ENSPFOG00000006822) ENSPFOG00000020348 OLFML2B (ENSPFOG00000006875) ENSPFOG00000006956 CERS4 (ENSPFOG00000007021) TIMM44 (ENSPFOG00000007215) rab11bb (ENSPFOG00000024114) #22 MARCHF2 (ENSPFOG00000007476) #23 slc25a36a (ENSPFOG00000007512) spsb4a (ENSPFOG00000007613) clstn2a (ENSPFOG00000007644) NMNAT3 (ENSPFOG00000008559) rbp1.1 (ENSPFOG00000023452) copb2 (ENSPFOG00000008606) dvl3a (ENSPFOG00000008888) ap2m1a (ENSPFOG00000009058) pcyt1aa (ENSPFOG00000009131) and3 (ENSPFOG00000009203) DYNC1I2 (ENSPFOG00000009232) slc25a12 (ENSPFOG00000009599) metap1d (ENSPFOG00000009936) itga6b (ENSPFOG00000010117) Guppy MODERN SPECIES 447 ptbp2b (ENSPREG00000014711) dpydb (ENSPREG00000014688) odr4 (ENSPREG00000014667) ENSPREG00000014589 ENSPREG00000014558 prg4a (ENSPREG00000014538) dusp12 (ENSPREG00000014521) OLFML2B (ENSPREG00000014496) ENSPREG00000014488 ENSPREG00000014481 kifap3b (ENSPREG00000014417) PDC (ENSPREG00000014388) ENSPREG00000014369 CTXN1 (ENSPREG00000014346) TIMM44 (ENSPREG00000014295) rab11bb (ENSPREG00000014269) #22 MARCHF2 (ENSPREG00000014259) #23 ENSPREG00000014251 ENSPREG00000014238 spsb4a (ENSPREG00000014221) clstn2a (ENSPREG00000014196) NMNAT3 (ENSPREG00000014156) rbp1.1 (ENSPREG00000014144) copb2 (ENSPREG00000014106) ENSPREG00000014095 dvl3a (ENSPREG00000014078) ap2m1a (ENSPREG00000014057) pcyt1aa (ENSPREG00000014022) and3 (ENSPREG00000014008) DYNC1I2 (ENSPREG00000013942) slc25a12 (ENSPREG00000013884) Platyfish MODERN SPECIES 20 CHD7 (ENSXMAG00000018590) ptbp2b (ENSXMAG00000018642) dpydb (ENSXMAG00000018645) odr4 (ENSXMAG00000018668) TPR (ENSXMAG00000018684) prg4a (ENSXMAG00000018717) dusp12 (ENSXMAG00000018722) ENSXMAG00000027606 OLFML2B (ENSXMAG00000018729) ENSXMAG00000026629 kifap3b (ENSXMAG00000018739) PDC (ENSXMAG00000018762) ENSXMAG00000018778 CTXN1 (ENSXMAG00000026623) TIMM44 (ENSXMAG00000018819) rab11bb (ENSXMAG00000011926) #22 MARCHF2 (ENSXMAG00000018861) #23 slc25a36a (ENSXMAG00000018866) spsb4a (ENSXMAG00000018887) clstn2a (ENSXMAG00000018890) NMNAT3 (ENSXMAG00000018929) rbp1.1 (ENSXMAG00000018933) copb2 (ENSXMAG00000018937) dvl3a (ENSXMAG00000018981) ap2m1a (ENSXMAG00000019001) pcyt1aa (ENSXMAG00000019014) and3 (ENSXMAG00000019029) DYNC1I2 (ENSXMAG00000019032) slc25a12 (ENSXMAG00000019058) metap1d (ENSXMAG00000019080) itga6b (ENSXMAG00000019094) NAME_4 ANCESTRAL SPECIES 9 ENSGT00940000153886.a.b ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 ENSGT00940000155353.a.a.b.g Mummichog MODERN SPECIES 2326 ENSFHEG00000018261 CTXN1 (ENSFHEG00000018270) TIMM44 (ENSFHEG00000018339) rab11bb (ENSFHEG00000018353) #22 MARCHF2 (ENSFHEG00000018375) #23 slc25a36a (ENSFHEG00000018399) spsb4a (ENSFHEG00000018422) clstn2a (ENSFHEG00000018475) NMNAT3 (ENSFHEG00000018505) rbp1.1 (ENSFHEG00000018522) copb2 (ENSFHEG00000018594) dvl3a (ENSFHEG00000018651) ap2m1a (ENSFHEG00000018703) pcyt1aa (ENSFHEG00000018749) and3 (ENSFHEG00000018762) DYNC1I2 (ENSFHEG00000018845) slc25a12 (ENSFHEG00000018890) metap1d (ENSFHEG00000018950) itga6b (ENSFHEG00000019221) Sheepshead minnow MODERN SPECIES 336 tox (ENSCVAG00000000458) ca8 (ENSCVAG00000017645) rab2a (ENSCVAG00000017623) CHD7 (ENSCVAG00000017584) ptbp2b (ENSCVAG00000017566) dpydb (ENSCVAG00000017559) odr4 (ENSCVAG00000017457) TPR (ENSCVAG00000017444) dusp12 (ENSCVAG00000017311) OLFML2B (ENSCVAG00000017284) ENSCVAG00000017271 kifap3b (ENSCVAG00000017254) PDC (ENSCVAG00000017136) ENSCVAG00000017123 TIMM44 (ENSCVAG00000017060) rab11bb (ENSCVAG00000017021) #22 MARCHF2 (ENSCVAG00000016997) #23 slc25a36a (ENSCVAG00000016985) ENSCVAG00000016936 spsb4a (ENSCVAG00000016921) clstn2a (ENSCVAG00000016907) ENSCVAG00000016794 Oryzias ANCESTRAL SPECIES 12 ENSGT00940000153886.a.b ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000158863 ENSGT00940000153886.a.b ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Indian medaka MODERN SPECIES 10 ca8 (ENSOMEG00000016716) rab2a (ENSOMEG00000016752) CHD7 (ENSOMEG00000016881) ptbp2b (ENSOMEG00000016950) dpydb (ENSOMEG00000017058) odr4 (ENSOMEG00000017193) ENSOMEG00000017267 prg4a (ENSOMEG00000017284) ENSOMEG00000017301 dusp12 (ENSOMEG00000017380) ENSOMEG00000017421 kifap3b (ENSOMEG00000017545) PDC (ENSOMEG00000017603) ENSOMEG00000017667 TIMM44 (ENSOMEG00000017767) rab11bb (ENSOMEG00000017806) #22 MARCHF2 (ENSOMEG00000017834) #23 slc25a36a (ENSOMEG00000017859) spsb4a (ENSOMEG00000017906) clstn2a (ENSOMEG00000017977) NMNAT3 (ENSOMEG00000018039) rbp1.1 (ENSOMEG00000018083) rbp2b (ENSOMEG00000018095) copb2 (ENSOMEG00000018165) dvl3a (ENSOMEG00000018321) ap2m1a (ENSOMEG00000018414) pcyt1aa (ENSOMEG00000018447) and3 (ENSOMEG00000018463) DYNC1I2 (ENSOMEG00000018565) slc25a12 (ENSOMEG00000018711) metap1d (ENSOMEG00000000484) Javanese ricefish MODERN SPECIES 8 ENSOJAG00000022952 tox (ENSOJAG00000022955) ca8 (ENSOJAG00000022960) rab2a (ENSOJAG00000022968) ptbp2b (ENSOJAG00000009624) odr4 (ENSOJAG00000011649) TPR (ENSOJAG00000011778) prg4a (ENSOJAG00000014427) dusp12 (ENSOJAG00000014454) OLFML2B (ENSOJAG00000014470) ENSOJAG00000014489 kifap3b (ENSOJAG00000014522) PDC (ENSOJAG00000014844) ENSOJAG00000014871 TIMM44 (ENSOJAG00000014954) rab11bb (ENSOJAG00000015481) #22 MARCHF2 (ENSOJAG00000015558) #23 slc25a36a (ENSOJAG00000015573) spsb4a (ENSOJAG00000015580) clstn2a (ENSOJAG00000015617) NMNAT3 (ENSOJAG00000016137) rbp1.1 (ENSOJAG00000016154) rbp2b (ENSOJAG00000016169) copb2 (ENSOJAG00000016214) dvl3a (ENSOJAG00000017146) ap2m1a (ENSOJAG00000017316) pcyt1aa (ENSOJAG00000017391) and3 (ENSOJAG00000017410) DYNC1I2 (ENSOJAG00000017447) slc25a12 (ENSOJAG00000018766) metap1d (ENSOJAG00000020200) Oryzias_a ANCESTRAL SPECIES 7 ENSGT00940000153886.a.b ENSGT00940000153649.A ENSGT01050000244924.a.b.h ENSGT00500000044896 ENSGT00390000012568 ENSGT00730000111014.o.a ENSGT00530000063751.a.b ENSGT00930000151041 ENSGT00940000157757.g.b ENSGT00940000154149.b.a.h ENSGT00390000003574.b ENSGT00940000156236.a.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Japanese Medaka HdrR MODERN SPECIES 8 rab2a (ENSORLG00000013432) CHD7 (ENSORLG00000013492) ptbp2b (ENSORLG00000013557) dpydb (ENSORLG00000013626) odr4 (ENSORLG00000013679) ENSORLG00000013763 prg4a (ENSORLG00000013785) dusp12 (ENSORLG00000013816) ENSORLG00000013860 ENSORLG00000024886 kifap3b (ENSORLG00000013884) pdca (ENSORLG00000013896) ENSORLG00000013903 ENSORLG00000026451 TIMM44 (ENSORLG00000013927) rab11bb (ENSORLG00000013938) #22 ENSORLG00000013951 #23 slc25a36a (ENSORLG00000013978) spsb4a (ENSORLG00000013981) ENSORLG00000026151 clstn2a (ENSORLG00000022231) rbp2b (ENSORLG00000028914) rbp1.1 (ENSORLG00000014005) copb2 (ENSORLG00000014074) dvl3a (ENSORLG00000014122) ap2m1a (ENSORLG00000014164) pcyt1aa (ENSORLG00000014200) and3 (ENSORLG00000014208) DYNC1I2 (ENSORLG00000014246) slc25a12 (ENSORLG00000014305) metap1d (ENSORLG00000014320) Chinese medaka MODERN SPECIES 522 ca8 (ENSOSIG00000012067) rab2a (ENSOSIG00000012069) CHD7 (ENSOSIG00000012096) ptbp2b (ENSOSIG00000012898) dpydb (ENSOSIG00000017085) TPR (ENSOSIG00000017181) prg4a (ENSOSIG00000017475) dusp12 (ENSOSIG00000017483) OLFML2B (ENSOSIG00000017493) ENSOSIG00000017499 kifap3b (ENSOSIG00000017501) PDC (ENSOSIG00000017506) ENSOSIG00000017515 TIMM44 (ENSOSIG00000017570) ENSOSIG00000017572 rab11bb (ENSOSIG00000017577) #22 MARCHF2 (ENSOSIG00000017579) #23 slc25a36a (ENSOSIG00000017582) spsb4a (ENSOSIG00000017585) clstn2a (ENSOSIG00000017760) NMNAT3 (ENSOSIG00000020465) rbp1.1 (ENSOSIG00000020468) rbp2b (ENSOSIG00000020472) copb2 (ENSOSIG00000020483) dvl3a (ENSOSIG00000020491) ap2m1a (ENSOSIG00000020528) pcyt1aa (ENSOSIG00000020532) and3 (ENSOSIG00000020533) DYNC1I2 (ENSOSIG00000020580) slc25a12 (ENSOSIG00000022063) metap1d (ENSOSIG00000022361) Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000181786 ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000181786 ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Haplochromini_B ANCESTRAL SPECIES 12 ENSGT00940000154539.a.b ENSGT00390000000259.k.a ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000155442.o.a ENSGT00940000155963.e ENSGT00940000157735 Zebra mbuna MODERN SPECIES 1100 MED26 (ENSMZEG00005003877) crtc1a (ENSMZEG00005003843) ENSMZEG00005003826 ENSMZEG00005003753 pik3r2 (ENSMZEG00005003704) ifi30 (ENSMZEG00005003671) ENSMZEG00005003607 RAB3A (ENSMZEG00005003592) jund (ENSMZEG00005003568) pgpep1 (ENSMZEG00005003549) upf1 (ENSMZEG00005003489) HOMER3 (ENSMZEG00005003452) ENSMZEG00005003430 CERS4 (ENSMZEG00005003420) TIMM44 (ENSMZEG00005003361) rab11bb (ENSMZEG00005003352) #22 MARCHF2 (ENSMZEG00005003339) #23 slc25a36a (ENSMZEG00005003295) zgc:136870 (ENSMZEG00005003269) spsb4a (ENSMZEG00005003260) clstn2a (ENSMZEG00005003196) NMNAT3 (ENSMZEG00005003102) rbp1.1 (ENSMZEG00005003083) rbp2b (ENSMZEG00005002902) copb2 (ENSMZEG00005002832) dvl3a (ENSMZEG00005002747) ap2m1a (ENSMZEG00005002719) pcyt1aa (ENSMZEG00005002705) DYNC1I2 (ENSMZEG00005002671) slc25a12 (ENSMZEG00005002619) metap1d (ENSMZEG00005002593) Eastern happy MODERN SPECIES 9 ENSACLG00000008019 MED26 (ENSACLG00000008014) crtc1a (ENSACLG00000007997) ENSACLG00000007990 ENSACLG00000007576 pik3r2 (ENSACLG00000007541) ifi30 (ENSACLG00000007526) ENSACLG00000007240 RAB3A (ENSACLG00000007231) jund (ENSACLG00000007226) pgpep1 (ENSACLG00000007217) upf1 (ENSACLG00000007181) HOMER3 (ENSACLG00000007133) CERS4 (ENSACLG00000007099) TIMM44 (ENSACLG00000007080) rab11bb (ENSACLG00000007076) #22 MARCHF2 (ENSACLG00000007071) #23 slc25a36a (ENSACLG00000007062) zgc:136870 (ENSACLG00000007054) spsb4a (ENSACLG00000007040) clstn2a (ENSACLG00000006605) NMNAT3 (ENSACLG00000006594) rbp1.1 (ENSACLG00000006586) rbp2b (ENSACLG00000006428) copb2 (ENSACLG00000006378) dvl3a (ENSACLG00000006365) ap2m1a (ENSACLG00000006350) pcyt1aa (ENSACLG00000006334) DYNC1I2 (ENSACLG00000006306) slc25a12 (ENSACLG00000006243) metap1d (ENSACLG00000006206) P. nyererei MODERN SPECIES 299 crtc1a (ENSPNYG00000003288) ENSPNYG00000003324 ENSPNYG00000003345 pik3r2 (ENSPNYG00000003416) ifi30 (ENSPNYG00000003489) ENSPNYG00000003518 ENSPNYG00000003553 RAB3A (ENSPNYG00000003624) jund (ENSPNYG00000003650) pgpep1 (ENSPNYG00000003672) upf1 (ENSPNYG00000003694) HOMER3 (ENSPNYG00000003778) ENSPNYG00000003807 uba52 (ENSPNYG00000003911) TIMM44 (ENSPNYG00000004070) rab11bb (ENSPNYG00000004098) #22 MARCHF2 (ENSPNYG00000004130) #23 slc25a36a (ENSPNYG00000004157) spsb4a (ENSPNYG00000004191) zgc:136870 (ENSPNYG00000004207) clstn2a (ENSPNYG00000004231) NMNAT3 (ENSPNYG00000004294) rbp1.1 (ENSPNYG00000004312) rbp2b (ENSPNYG00000004334) copb2 (ENSPNYG00000004364) dvl3a (ENSPNYG00000004421) ap2m1a (ENSPNYG00000004468) pcyt1aa (ENSPNYG00000004498) DYNC1I2 (ENSPNYG00000004520) slc25a12 (ENSPNYG00000004566) metap1d (ENSPNYG00000004632) Burton s mouthbrooder MODERN SPECIES 306 MED26 (ENSHBUG00000011460) crtc1a (ENSHBUG00000011475) ENSHBUG00000011494 ENSHBUG00000014224 pik3r2 (ENSHBUG00000014380) ifi30 (ENSHBUG00000014409) ENSHBUG00000014429 RAB3A (ENSHBUG00000014437) jund (ENSHBUG00000014447) pgpep1 (ENSHBUG00000000426) upf1 (ENSHBUG00000014694) ENSHBUG00000014718 HOMER3 (ENSHBUG00000014740) ENSHBUG00000014765 TIMM44 (ENSHBUG00000014769) rab11bb (ENSHBUG00000014777) #22 MARCHF2 (ENSHBUG00000000436) #23 slc25a36a (ENSHBUG00000014826) zgc:136870 (ENSHBUG00000014834) spsb4a (ENSHBUG00000014842) clstn2a (ENSHBUG00000014896) NMNAT3 (ENSHBUG00000014910) rbp1.1 (ENSHBUG00000014944) rbp2b (ENSHBUG00000014989) copb2 (ENSHBUG00000015177) dvl3a (ENSHBUG00000015268) ap2m1a (ENSHBUG00000015302) pcyt1aa (ENSHBUG00000015337) DYNC1I2 (ENSHBUG00000015379) slc25a12 (ENSHBUG00000000996) metap1d (ENSHBUG00000015543) Lyretail cichlid MODERN SPECIES 300 crtc1a (ENSNBRG00000001070) ENSNBRG00000001060 ENSNBRG00000000988 pik3r2 (ENSNBRG00000000914) ifi30 (ENSNBRG00000000901) ENSNBRG00000000846 RAB3A (ENSNBRG00000000839) jund (ENSNBRG00000000825) pgpep1 (ENSNBRG00000000761) upf1 (ENSNBRG00000000670) ENSNBRG00000000632 HOMER3 (ENSNBRG00000000598) uba52 (ENSNBRG00000000583) CERS4 (ENSNBRG00000000500) TIMM44 (ENSNBRG00000000376) rab11bb (ENSNBRG00000000372) #22 MARCHF2 (ENSNBRG00000000345) #23 slc25a36a (ENSNBRG00000000318) zgc:136870 (ENSNBRG00000022923) spsb4a (ENSNBRG00000022916) clstn2a (ENSNBRG00000022882) NMNAT3 (ENSNBRG00000022863) rbp1.1 (ENSNBRG00000022813) rbp2b (ENSNBRG00000022801) copb2 (ENSNBRG00000022777) dvl3a (ENSNBRG00000022744) ap2m1a (ENSNBRG00000022722) pcyt1aa (ENSNBRG00000022706) DYNC1I2 (ENSNBRG00000022681) slc25a12 (ENSNBRG00000022645) metap1d (ENSNBRG00000022632) Midas cichlid MODERN SPECIES 235 ENSACIG00000020471 ENSACIG00000020452 pik3r2 (ENSACIG00000020433) IFI30 (ENSACIG00000020300) ENSACIG00000020265 RAB3A (ENSACIG00000020019) jund (ENSACIG00000020001) pgpep1 (ENSACIG00000019992) upf1 (ENSACIG00000019949) lzic (ENSACIG00000019942) HOMER3 (ENSACIG00000019924) uba52 (ENSACIG00000019707) ENSACIG00000019677 CTXN1 (ENSACIG00000019666) TIMM44 (ENSACIG00000019644) rab11bb (ENSACIG00000019631) #22 MARCHF2 (ENSACIG00000019618) #23 slc25a36a (ENSACIG00000019600) zgc:136870 (ENSACIG00000019585) spsb4a (ENSACIG00000019576) ENSACIG00000019567 clstn2a (ENSACIG00000019526) NMNAT3 (ENSACIG00000019503) rbp1.1 (ENSACIG00000019416) rbp2b (ENSACIG00000019401) copb2 (ENSACIG00000019369) dvl3a (ENSACIG00000019339) ap2m1a (ENSACIG00000019325) pcyt1aa (ENSACIG00000019309) ENSACIG00000019302 DYNC1I2 (ENSACIG00000019284) Pomacentridae ANCESTRAL SPECIES 6 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Pomacentridae_A ANCESTRAL SPECIES 18 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Amphiprion ANCESTRAL SPECIES 56 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Orange clownfish MODERN SPECIES 1 crtc1a (ENSAPEG00000016019) ENSAPEG00000016053 ENSAPEG00000016073 pik3r2 (ENSAPEG00000016119) ifi30 (ENSAPEG00000016204) ENSAPEG00000016224 RAB3A (ENSAPEG00000016297) jund (ENSAPEG00000016308) pgpep1 (ENSAPEG00000016314) upf1 (ENSAPEG00000016344) HOMER3 (ENSAPEG00000016482) uba52 (ENSAPEG00000016505) ENSAPEG00000016515 CTXN1 (ENSAPEG00000016527) TIMM44 (ENSAPEG00000016535) rab11bb (ENSAPEG00000016590) #22 MARCHF2 (ENSAPEG00000016600) #23 slc25a36a (ENSAPEG00000016623) spsb4a (ENSAPEG00000016656) zgc:136870 (ENSAPEG00000016668) clstn2a (ENSAPEG00000016707) NMNAT3 (ENSAPEG00000016768) rbp1.1 (ENSAPEG00000016783) rbp2b (ENSAPEG00000016791) copb2 (ENSAPEG00000016809) dvl3a (ENSAPEG00000016879) ap2m1a (ENSAPEG00000016947) pcyt1aa (ENSAPEG00000016980) and3 (ENSAPEG00000016994) DYNC1I2 (ENSAPEG00000017015) slc25a12 (ENSAPEG00000017081) Clown anemonefish MODERN SPECIES 694 ENSAOCG00000002362 ENSAOCG00000018850 pik3r2 (ENSAOCG00000001345) ifi30 (ENSAOCG00000018652) ENSAOCG00000018626 ENSAOCG00000001336 RAB3A (ENSAOCG00000018573) jund (ENSAOCG00000018564) pgpep1 (ENSAOCG00000018549) upf1 (ENSAOCG00000018519) HOMER3 (ENSAOCG00000018407) uba52 (ENSAOCG00000018365) ENSAOCG00000018339 CTXN1 (ENSAOCG00000018267) TIMM44 (ENSAOCG00000018254) rab11bb (ENSAOCG00000018239) #22 MARCHF2 (ENSAOCG00000018227) #23 slc25a36a (ENSAOCG00000018206) Spiny chromis MODERN SPECIES 158 ENSAPOG00000024494 CPS1 (ENSAPOG00000024457) myl1 (ENSAPOG00000024090) ENSAPOG00000024069 pik3r2 (ENSAPOG00000024009) ifi30 (ENSAPOG00000023955) ENSAPOG00000023917 RAB3A (ENSAPOG00000000673) jund (ENSAPOG00000023818) pgpep1 (ENSAPOG00000023806) upf1 (ENSAPOG00000023773) HOMER3 (ENSAPOG00000023680) ENSAPOG00000023625 CTXN1 (ENSAPOG00000023565) TIMM44 (ENSAPOG00000023542) rab11bb (ENSAPOG00000023455) #22 MARCHF2 (ENSAPOG00000023418) #23 slc25a36a (ENSAPOG00000023367) spsb4a (ENSAPOG00000023306) zgc:136870 (ENSAPOG00000023257) clstn2a (ENSAPOG00000023252) Bicolor damselfish MODERN SPECIES 1215 ENSSPAG00000011357 CTXN1 (ENSSPAG00000011381) TIMM44 (ENSSPAG00000011387) rab11bb (ENSSPAG00000011419) #22 MARCHF2 (ENSSPAG00000011441) #23 slc25a36a (ENSSPAG00000011459) spsb4a (ENSSPAG00000011489) zgc:136870 (ENSSPAG00000011499) pbdc1 (ENSSPAG00000011515) xpo7 (ENSSPAG00000011560) Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00770000121812 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00990000206484 ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00990000206484 ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o Carangaria ANCESTRAL SPECIES 5 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Carangaria_A ANCESTRAL SPECIES 2 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Barramundi perch MODERN SPECIES 69 crtc1a (ENSLCAG00010021571) ENSLCAG00010021568 MAST3 (ENSLCAG00010021565) pik3r2 (ENSLCAG00010021561) ifi30 (ENSLCAG00010021559) ENSLCAG00010021553 RAB3A (ENSLCAG00010021537) jund (ENSLCAG00010021531) pgpep1 (ENSLCAG00010021529) upf1 (ENSLCAG00010021515) HOMER3 (ENSLCAG00010021508) uba52 (ENSLCAG00010021500) CERS4 (ENSLCAG00010021499) CTXN1 (ENSLCAG00010021496) TIMM44 (ENSLCAG00010021394) rab11bb (ENSLCAG00010021340) #22 MARCHF2 (ENSLCAG00010021331) #23 slc25a36a (ENSLCAG00010021326) zgc:136870 (ENSLCAG00010021318) spsb4a (ENSLCAG00010021315) clstn2a (ENSLCAG00010021304) NMNAT3 (ENSLCAG00010021301) rbp1.1 (ENSLCAG00010021298) rbp2b (ENSLCAG00010021293) copb2 (ENSLCAG00010020835) dvl3a (ENSLCAG00010020676) ap2m1a (ENSLCAG00010020671) pcyt1aa (ENSLCAG00010020649) and3 (ENSLCAG00010020638) DYNC1I2 (ENSLCAG00010020244) slc25a12 (ENSLCAG00010020138) Seriola ANCESTRAL SPECIES ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Greater amberjack MODERN SPECIES 83 crtc1a (ENSSDUG00000012878) ENSSDUG00000012917 MAST3 (ENSSDUG00000012940) pik3r2 (ENSSDUG00000013068) ifi30 (ENSSDUG00000013153) ENSSDUG00000013184 RAB3A (ENSSDUG00000013259) jund (ENSSDUG00000013277) pgpep1 (ENSSDUG00000013291) upf1 (ENSSDUG00000013320) HOMER3 (ENSSDUG00000013419) uba52 (ENSSDUG00000013436) CERS4 (ENSSDUG00000013462) CTXN1 (ENSSDUG00000013526) TIMM44 (ENSSDUG00000013532) rab11bb (ENSSDUG00000013558) #22 MARCHF2 (ENSSDUG00000013566) #23 slc25a36a (ENSSDUG00000013585) spsb4a (ENSSDUG00000013610) zgc:136870 (ENSSDUG00000013620) clstn2a (ENSSDUG00000013636) NMNAT3 (ENSSDUG00000013697) rbp1.1 (ENSSDUG00000013706) rbp2b (ENSSDUG00000013743) copb2 (ENSSDUG00000013764) dvl3a (ENSSDUG00000013838) ap2m1a (ENSSDUG00000013877) pcyt1aa (ENSSDUG00000013919) and3 (ENSSDUG00000013946) DYNC1I2 (ENSSDUG00000013954) slc25a12 (ENSSDUG00000014017) Yellowtail amberjack MODERN SPECIES 3160 ENSSLDG00000021167 ENSSLDG00000021162 MAST3 (ENSSLDG00000021107) pik3r2 (ENSSLDG00000021025) ifi30 (ENSSLDG00000021006) ENSSLDG00000020948 RAB3A (ENSSLDG00000020924) jund (ENSSLDG00000020919) pgpep1 (ENSSLDG00000020900) upf1 (ENSSLDG00000020868) HOMER3 (ENSSLDG00000020840) uba52 (ENSSLDG00000020739) CERS4 (ENSSLDG00000020711) CTXN1 (ENSSLDG00000020704) TIMM44 (ENSSLDG00000020686) rab11bb (ENSSLDG00000020676) #22 MARCHF2 (ENSSLDG00000020670) #23 slc25a36a (ENSSLDG00000020649) zgc:136870 (ENSSLDG00000020640) spsb4a (ENSSLDG00000020633) clstn2a (ENSSLDG00000020561) NMNAT3 (ENSSLDG00000020535) rbp1.1 (ENSSLDG00000020526) rbp2b (ENSSLDG00000020513) copb2 (ENSSLDG00000020433) ENSSLDG00000020405 dvl3a (ENSSLDG00000020388) ap2m1a (ENSSLDG00000020332) pcyt1aa (ENSSLDG00000020304) and3 (ENSSLDG00000020294) DYNC1I2 (ENSSLDG00000020217) Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00390000000259.k.a ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00990000206484 ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Tongue sole MODERN SPECIES 12 ANO8 (ENSCSEG00000011808) dda1 (ENSCSEG00000011826) mrpl34 (ENSCSEG00000011848) ABHD8 (ENSCSEG00000011834) ENSCSEG00000011867 st3gal3b (ENSCSEG00000011962) ENSCSEG00000012026 ##27 ptger4c (ENSCSEG00000012031) pif1 (ENSCSEG00000012036) ENSCSEG00000012053 nsun4 (ENSCSEG00000012057) dmbx1a (ENSCSEG00000012068) ENSCSEG00000012095 CTXN1 (ENSCSEG00000012121) TIMM44 (ENSCSEG00000012127) rab11bb (ENSCSEG00000012149) #22 MARCHF2 (ENSCSEG00000012156) #23 slc25a36a (ENSCSEG00000012199) spsb4a (ENSCSEG00000012242) clstn2a (ENSCSEG00000012265) NMNAT3 (ENSCSEG00000012360) rbp1.1 (ENSCSEG00000012366) copb2 (ENSCSEG00000012387) dvl3a (ENSCSEG00000012425) ap2m1a (ENSCSEG00000012443) pcyt1a (ENSCSEG00000013124) and3 (ENSCSEG00000013163) DYNC1I2 (ENSCSEG00000013179) slc25a12 (ENSCSEG00000013220) metap1d (ENSCSEG00000013260) itga6b (ENSCSEG00000013305) Turbot MODERN SPECIES 19 ENSSMAG00000027684 crtc1a (ENSSMAG00000005344) ENSSMAG00000005337 ENSSMAG00000005306 pik3r2 (ENSSMAG00000005255) ifi30 (ENSSMAG00000005240) ENSSMAG00000005152 ENSSMAG00000005141 jund (ENSSMAG00000005129) pgpep1 (ENSSMAG00000005111) upf1 (ENSSMAG00000005055) ENSSMAG00000005036 ENSSMAG00000004963 ENSSMAG00000004955 ENSSMAG00000004929 rab11bb (ENSSMAG00000004922) #22 ENSSMAG00000004909 #23 slc25a36a (ENSSMAG00000004893) ENSSMAG00000004876 spsb4a (ENSSMAG00000004857) clstn2a (ENSSMAG00000004743) NMNAT3 (ENSSMAG00000022760) rbp1.1 (ENSSMAG00000004704) rbp2b (ENSSMAG00000020703) copb2 (ENSSMAG00000004635) dvl3a (ENSSMAG00000004618) ENSSMAG00000004560 ENSSMAG00000004543 ENSSMAG00000004527 DYNC1I2 (ENSSMAG00000004501) ENSSMAG00000004437 Anabantaria ANCESTRAL SPECIES 8 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Zig-zag eel MODERN SPECIES 8 crtc1a (ENSMAMG00000024320) ENSMAMG00000005932 ENSMAMG00000005957 pik3r2 (ENSMAMG00000005988) ifi30 (ENSMAMG00000006032) ENSMAMG00000006043 ENSMAMG00000006185 jund (ENSMAMG00000006203) pgpep1 (ENSMAMG00000006217) upf1 (ENSMAMG00000006229) ENSMAMG00000006299 uba52 (ENSMAMG00000006321) ENSMAMG00000006327 ENSMAMG00000006355 ENSMAMG00000006367 rab11bb (ENSMAMG00000006378) #22 ENSMAMG00000006383 #23 ENSMAMG00000024459 spsb4a (ENSMAMG00000006429) zgc:136870 (ENSMAMG00000006438) clstn2a (ENSMAMG00000006456) NMNAT3 (ENSMAMG00000006484) rbp1.1 (ENSMAMG00000006493) rbp2b (ENSMAMG00000006509) copb2 (ENSMAMG00000006528) ENSMAMG00000006605 ENSMAMG00000006654 ENSMAMG00000006685 ENSMAMG00000006711 DYNC1I2 (ENSMAMG00000006738) ENSMAMG00000006786 Anabantoidei ANCESTRAL SPECIES 18 ENSGT00390000000259.k.a ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Siamese fighting fish MODERN SPECIES 8 rps15 (ENSBSLG00000026371) ENSBSLG00000026364 MED26 (ENSBSLG00000026361) crtc1a (ENSBSLG00000026358) ENSBSLG00000026355 ENSBSLG00000026340 pik3r2 (ENSBSLG00000026300) ifi30 (ENSBSLG00000026282) ENSBSLG00000026267 RAB3A (ENSBSLG00000026265) jund (ENSBSLG00000026263) upf1 (ENSBSLG00000026232) HOMER3 (ENSBSLG00000026184) CERS4 (ENSBSLG00000026180) TIMM44 (ENSBSLG00000026140) rab11bb (ENSBSLG00000026102) #22 MARCHF2 (ENSBSLG00000026100) #23 slc25a36a (ENSBSLG00000026093) spsb4a (ENSBSLG00000026084) clstn2a (ENSBSLG00000026017) NMNAT3 (ENSBSLG00000025789) rbp1.1 (ENSBSLG00000025786) rbp2b (ENSBSLG00000025784) copb2 (ENSBSLG00000025730) dvl3a (ENSBSLG00000025490) ap2m1a (ENSBSLG00000025307) pcyt1aa (ENSBSLG00000025304) and3 (ENSBSLG00000025301) DYNC1I2 (ENSBSLG00000025146) slc25a12 (ENSBSLG00000024692) metap1d (ENSBSLG00000024664) Climbing perch MODERN SPECIES 8 ENSATEG00000018140 crtc1a (ENSATEG00000028370) ENSATEG00000018108 ENSATEG00000018067 pik3r2 (ENSATEG00000018016) ifi30 (ENSATEG00000017995) ENSATEG00000017963 ENSATEG00000016038 jund (ENSATEG00000017942) pgpep1 (ENSATEG00000017928) upf1 (ENSATEG00000017867) ENSATEG00000017747 ENSATEG00000017729 ENSATEG00000017721 TIMM44 (ENSATEG00000029811) rab11bb (ENSATEG00000017696) #22 ENSATEG00000017679 #23 ENSATEG00000017649 spsb4a (ENSATEG00000017626) zgc:136870 (ENSATEG00000025289) clstn2a (ENSATEG00000017562) NMNAT3 (ENSATEG00000017549) rbp1.1 (ENSATEG00000017531) rbp2b (ENSATEG00000017508) copb2 (ENSATEG00000017430) ENSATEG00000017381 ENSATEG00000017335 ENSATEG00000017306 ENSATEG00000017285 DYNC1I2 (ENSATEG00000017227) ENSATEG00000017182 Eupercaria ANCESTRAL SPECIES 22 ENSGT00770000121812 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00990000206484 ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00390000000259.k.a ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT00990000206484 ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Tetraodon MODERN SPECIES 6 CNN3 (ENSTNIG00000011065) MED26 (ENSTNIG00000011066) crtc1a (ENSTNIG00000011067) ENSTNIG00000011068 MAST3 (ENSTNIG00000011069) pik3r2 (ENSTNIG00000011070) ifi30 (ENSTNIG00000011071) ENSTNIG00000011072 RAB3A (ENSTNIG00000011073) pgpep1 (ENSTNIG00000011075) upf1 (ENSTNIG00000011076) HOMER3 (ENSTNIG00000011077) ENSTNIG00000011078 CTXN1 (ENSTNIG00000011079) TIMM44 (ENSTNIG00000011080) rab11bb (ENSTNIG00000011081) #22 MARCHF2 (ENSTNIG00000011082) #23 slc25a36a (ENSTNIG00000011083) spsb4a (ENSTNIG00000011084) clstn2a (ENSTNIG00000011085) NMNAT3 (ENSTNIG00000011086) copb2 (ENSTNIG00000011087) dvl3a (ENSTNIG00000011088) ap2m1a (ENSTNIG00000011089) pcyt1aa (ENSTNIG00000011090) and3 (ENSTNIG00000011091) DYNC1I2 (ENSTNIG00000011092) slc25a12 (ENSTNIG00000011093) metap1d (ENSTNIG00000011094) itga6b (ENSTNIG00000011095) rapgef4b (ENSTNIG00000011096) Fugu MODERN SPECIES 14 MED26 (ENSTRUG00000031403) crtc1a (ENSTRUG00000010109) ENSTRUG00000031956 MAST3 (ENSTRUG00000010313) pik3r2 (ENSTRUG00000010476) ifi30 (ENSTRUG00000010959) ENSTRUG00000011028 RAB3A (ENSTRUG00000011189) jund (ENSTRUG00000024983) pgpep1 (ENSTRUG00000026311) upf1 (ENSTRUG00000000150) HOMER3 (ENSTRUG00000000171) ENSTRUG00000000191 CTXN1 (ENSTRUG00000000204) TIMM44 (ENSTRUG00000000206) rab11bb (ENSTRUG00000033264) #22 MARCHF2 (ENSTRUG00000000243) #23 slc25a36a (ENSTRUG00000000258) ENSTRUG00000000285 spsb4a (ENSTRUG00000023923) clstn2a (ENSTRUG00000000290) NMNAT3 (ENSTRUG00000000361) rbp1.1 (ENSTRUG00000000390) copb2 (ENSTRUG00000000411) dvl3a (ENSTRUG00000000483) ap2m1a (ENSTRUG00000000587) pcyt1aa (ENSTRUG00000000674) and3 (ENSTRUG00000025029) ENSTRUG00000000748 slc25a12 (ENSTRUG00000000852) ENSTRUG00000001321 Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00770000121812 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Ballan wrasse MODERN SPECIES 218 ENSLBEG00000014104 ENSLBEG00000014130 ENSLBEG00000014147 ENSLBEG00000014236 pik3r2 (ENSLBEG00000014394) ifi30 (ENSLBEG00000014482) ENSLBEG00000014543 RAB3A (ENSLBEG00000014792) jund (ENSLBEG00000014823) pgpep1 (ENSLBEG00000014837) upf1 (ENSLBEG00000014862) HOMER3 (ENSLBEG00000014982) ENSLBEG00000015169 CTXN1 (ENSLBEG00000015199) TIMM44 (ENSLBEG00000015213) rab11bb (ENSLBEG00000015248) #22 MARCHF2 (ENSLBEG00000015279) #23 slc25a36a (ENSLBEG00000015309) spsb4a (ENSLBEG00000015356) zgc:136870 (ENSLBEG00000015372) clstn2a (ENSLBEG00000015393) NMNAT3 (ENSLBEG00000015448) rbp1.1 (ENSLBEG00000015461) rbp2b (ENSLBEG00000015473) copb2 (ENSLBEG00000015514) dvl3a (ENSLBEG00000015569) ENSLBEG00000015680 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00770000121812 ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Gilthead seabream MODERN SPECIES 13 CCNY (ENSSAUG00010026116) ENSSAUG00010026115 pard3ab (ENSSAUG00010023401) NRP1 (ENSSAUG00010023216) itgb1b (ENSSAUG00010019402) ENSSAUG00010019344 ENSSAUG00010019339 ENSSAUG00010019336 ENSSAUG00010019331 arhgap12b (ENSSAUG00010016958) ENSSAUG00010016918 KIF5B (ENSSAUG00010013793) pold3 (ENSSAUG00010013750) ENSSAUG00010013200 CTXN1 (ENSSAUG00010013180) rab11bb (ENSSAUG00010013144) #22 TIMM44 (ENSSAUG00010012552) slc25a36a (ENSSAUG00010012537) spsb4a (ENSSAUG00010012534) clstn2a (ENSSAUG00010027604) NMNAT3 (ENSSAUG00010027602) rbp1.1 (ENSSAUG00010027601) rbp2b (ENSSAUG00010027600) copb2 (ENSSAUG00010027590) dvl3a (ENSSAUG00010027548) ap2m1a (ENSSAUG00010027545) pcyt1aa (ENSSAUG00010027543) and3 (ENSSAUG00010027542) DYNC1I2 (ENSSAUG00010027523) slc25a12 (ENSSAUG00010027446) metap1d (ENSSAUG00010027416) Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Large yellow croaker MODERN SPECIES 483 ENSLCRG00005023663 rps15 (ENSLCRG00005023659) ENSLCRG00005023658 pik3r2 (ENSLCRG00005023647) ifi30 (ENSLCRG00005023645) ENSLCRG00005023641 RAB3A (ENSLCRG00005023639) jund (ENSLCRG00005023638) pgpep1 (ENSLCRG00005023637) upf1 (ENSLCRG00005023597) HOMER3 (ENSLCRG00005023593) uba52 (ENSLCRG00005023591) ENSLCRG00005023590 ENSLCRG00005023589 TIMM44 (ENSLCRG00005023576) rab11bb (ENSLCRG00005023575) #22 MARCHF2 (ENSLCRG00005023574) #23 slc25a36a (ENSLCRG00005023573) zgc:136870 (ENSLCRG00005023572) spsb4a (ENSLCRG00005023571) clstn2a (ENSLCRG00005023521) NMNAT3 (ENSLCRG00005023515) rbp1.1 (ENSLCRG00005023514) rbp2b (ENSLCRG00005023513) copb2 (ENSLCRG00005023427) dvl3a (ENSLCRG00005023423) ap2m1a (ENSLCRG00005023420) pcyt1aa (ENSLCRG00005023416) and3 (ENSLCRG00005023413) DYNC1I2 (ENSLCRG00005022746) slc25a12 (ENSLCRG00005022120) European seabass MODERN SPECIES ENSDLAG00005011937 ENSDLAG00005011964 crtc1a (ENSDLAG00005011972) ENSDLAG00005002544 ENSDLAG00005002659 pik3r2 (ENSDLAG00005003340) ifi30 (ENSDLAG00005003806) ENSDLAG00005003922 ENSDLAG00005026750 jund (ENSDLAG00005033524) upf1 (ENSDLAG00005005647) ENSDLAG00005006531 ENSDLAG00005006568 ENSDLAG00005006586 ENSDLAG00005031877 rab11bb (ENSDLAG00005006977) #22 ENSDLAG00005007195 #23 ENSDLAG00005007214 spsb4a (ENSDLAG00005007295) zgc:136870 (ENSDLAG00005007302) clstn2a (ENSDLAG00005007311) NMNAT3 (ENSDLAG00005007373) rbp1.1 (ENSDLAG00005027822) rbp2b (ENSDLAG00005007381) copb2 (ENSDLAG00005007428) ENSDLAG00005008457 ENSDLAG00005008772 ENSDLAG00005008795 ENSDLAG00005008952 DYNC1I2 (ENSDLAG00005009088) ENSDLAG00005012453 Perciformes ANCESTRAL SPECIES 5 ENSGT00770000121812 ENSGT00940000161872 ENSGT00940000157166.d.b ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Perciformes_a ANCESTRAL SPECIES 17 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d.b ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Channel bull blenny MODERN SPECIES 8 crtc1a (ENSCGOG00000018393) ENSCGOG00000018388 ENSCGOG00000018385 pik3r2 (ENSCGOG00000017734) ifi30 (ENSCGOG00000017696) ENSCGOG00000015645 jund (ENSCGOG00000015574) RAB3A (ENSCGOG00000015547) pgpep1 (ENSCGOG00000015544) upf1 (ENSCGOG00000015291) HOMER3 (ENSCGOG00000015280) uba52 (ENSCGOG00000015279) ENSCGOG00000015260 CTXN1 (ENSCGOG00000015256) TIMM44 (ENSCGOG00000014872) rab11bb (ENSCGOG00000014861) #22 MARCHF2 (ENSCGOG00000014860) #23 slc25a36a (ENSCGOG00000014854) spsb4a (ENSCGOG00000014851) clstn2a (ENSCGOG00000014188) NMNAT3 (ENSCGOG00000014162) rbp1.1 (ENSCGOG00000014153) rbp2b (ENSCGOG00000014126) copb2 (ENSCGOG00000013176) dvl3a (ENSCGOG00000012594) ap2m1a (ENSCGOG00000012546) pcyt1aa (ENSCGOG00000012307) and3 (ENSCGOG00000012296) ENSCGOG00000010097 slc25a12 (ENSCGOG00000022233) metap1d (ENSCGOG00000022166) Pike perch MODERN SPECIES 55 crtc1a (ENSSLUG00000005455) ENSSLUG00000005448 ENSSLUG00000005443 MAST3 (ENSSLUG00000005343) pik3r2 (ENSSLUG00000004691) ifi30 (ENSSLUG00000004635) ENSSLUG00000004338 RAB3A (ENSSLUG00000004254) jund (ENSSLUG00000004248) pgpep1 (ENSSLUG00000004242) upf1 (ENSSLUG00000004153) HOMER3 (ENSSLUG00000004119) ENSSLUG00000004097 CTXN1 (ENSSLUG00000004074) TIMM44 (ENSSLUG00000003631) rab11bb (ENSSLUG00000003397) #22 MARCHF2 (ENSSLUG00000003365) #23 slc25a36a (ENSSLUG00000003329) spsb4a (ENSSLUG00000003305) clstn2a (ENSSLUG00000001936) NMNAT3 (ENSSLUG00000001488) rbp1.1 (ENSSLUG00000001482) rbp2b (ENSSLUG00000024153) copb2 (ENSSLUG00000023763) dvl3a (ENSSLUG00000023682) ap2m1a (ENSSLUG00000023669) pcyt1aa (ENSSLUG00000023650) and3 (ENSSLUG00000023638) DYNC1I2 (ENSSLUG00000021578) slc25a12 (ENSSLUG00000019402) metap1d (ENSSLUG00000019296) Cottioidei ANCESTRAL SPECIES 15 ENSGT00770000121812 ENSGT00940000161872 ENSGT00940000157166.d.b ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e ENSGT00940000157735 Stickleback MODERN SPECIES 2 crtc1a (ENSGACG00000015531) ENSGACG00000015528 ENSGACG00000015527 MAST3 (ENSGACG00000015523) pik3r2 (ENSGACG00000015520) ifi30 (ENSGACG00000015519) ENSGACG00000015515 RAB3A (ENSGACG00000015513) jund (ENSGACG00000015511) pgpep1 (ENSGACG00000015509) upf1 (ENSGACG00000015504) ENSGACG00000015501 CERS4 (ENSGACG00000015496) ENSGACG00000015495 TIMM44 (ENSGACG00000015487) rab11bb (ENSGACG00000015479) #22 MARCHF2 (ENSGACG00000015477) #23 slc25a36a (ENSGACG00000015473) spsb4a (ENSGACG00000015471) clstn2a (ENSGACG00000015468) NMNAT3 (ENSGACG00000015460) copb2 (ENSGACG00000015455) dvl3a (ENSGACG00000015451) ap2m1a (ENSGACG00000015444) pcyt1aa (ENSGACG00000015442) and3 (ENSGACG00000015438) DYNC1I2 (ENSGACG00000015431) slc25a12 (ENSGACG00000015426) metap1d (ENSGACG00000015425) itga6b (ENSGACG00000015418) ENSGACG00000015416 Lumpfish MODERN SPECIES 8 ENSCLMG00005011114 MAST3 (ENSCLMG00005011111) pik3r2 (ENSCLMG00005009644) ifi30 (ENSCLMG00005009629) ENSCLMG00005009477 RAB3A (ENSCLMG00005009473) jund (ENSCLMG00005009472) pgpep1 (ENSCLMG00005009453) upf1 (ENSCLMG00005009276) ENSCLMG00005009267 ENSCLMG00005009265 uba52 (ENSCLMG00005009262) CERS4 (ENSCLMG00005009260) CTXN1 (ENSCLMG00005009257) TIMM44 (ENSCLMG00005009244) rab11bb (ENSCLMG00005009159) #22 MARCHF2 (ENSCLMG00005009155) #23 slc25a36a (ENSCLMG00005009154) spsb4a (ENSCLMG00005009153) clstn2a (ENSCLMG00005009148) NMNAT3 (ENSCLMG00005009145) rbp1.1 (ENSCLMG00005009141) rbp2b (ENSCLMG00005009140) copb2 (ENSCLMG00005008047) dvl3a (ENSCLMG00005007983) ap2m1a (ENSCLMG00005007959) pcyt1aa (ENSCLMG00005007903) and3 (ENSCLMG00005007900) DYNC1I2 (ENSCLMG00005007699) SLC25A12 (ENSCLMG00005002153) metap1d (ENSCLMG00005002132) Pinecone sodierfish MODERN SPECIES 8 crtc1a (ENSMMDG00005014379) ENSMMDG00005014383 MAST3 (ENSMMDG00005014384) pik3r2 (ENSMMDG00005014416) ifi30 (ENSMMDG00005015289) ENSMMDG00005015290 RAB3A (ENSMMDG00005015295) jund (ENSMMDG00005015297) pgpep1 (ENSMMDG00005015307) upf1 (ENSMMDG00005015515) HOMER3 (ENSMMDG00005016621) uba52 (ENSMMDG00005016682) ENSMMDG00005016688 CTXN1 (ENSMMDG00005016693) TIMM44 (ENSMMDG00005016705) rab11bb (ENSMMDG00005016770) #22 MARCHF2 (ENSMMDG00005016775) #23 slc25a36a (ENSMMDG00005016779) spsb4a (ENSMMDG00005016781) zgc:136870 (ENSMMDG00005016783) clstn2a (ENSMMDG00005016797) ENSMMDG00005016891 NMNAT3 (ENSMMDG00005016893) rbp1.1 (ENSMMDG00005016895) rbp2b (ENSMMDG00005016897) copb2 (ENSMMDG00005016919) dvl3a (ENSMMDG00005018119) ap2m1a (ENSMMDG00005018230) pcyt1aa (ENSMMDG00005018238) and3 (ENSMMDG00005018246) DYNC1I2 (ENSMMDG00005018308) Protacanthopterygii ANCESTRAL SPECIES 60 ENSGT00390000010652.D.a.b ENSGT00940000161872 ENSGT00940000157166.d ENSGT00940000157050.i.a ENSGT00940000164804.a ENSGT00940000164492.a.a ENSGT00940000158959.a.a.a ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00940000161729.m.a ENSGT00390000011725.d ENSGT00940000153655.A.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 83 ENSGT00390000010652.D.a.b.d.b ENSGT00940000161872.g ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c #22 ENSGT00940000158995.b.a #23 ENSGT00940000154369.g.a.g ENSGT01030000234629.C.a.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c Huchen MODERN SPECIES 636 RAB3A (ENSHHUG00000037938) jund (ENSHHUG00000037933) pgpep1 (ENSHHUG00000037923) upf1 (ENSHHUG00000037879) HOMER3 (ENSHHUG00000037867) uba52 (ENSHHUG00000037841) ENSHHUG00000037767 TIMM44 (ENSHHUG00000037749) rab11bb (ENSHHUG00000037740) #22 MARCHF2 (ENSHHUG00000037734) #23 slc25a36a (ENSHHUG00000037726) ENSHHUG00000037723 spsb4a (ENSHHUG00000037714) clstn2a (ENSHHUG00000037660) ENSHHUG00000037655 Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00390000010652.D.a.b.d.b ENSGT00940000161872.g ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.b.b.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c #22 ENSGT00940000158995.b.a #23 ENSGT00940000154369.g.a.g ENSGT01030000234629.C.a.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c Salmo ANCESTRAL SPECIES 35 ENSGT00390000010652.D.a.b.d.b ENSGT00940000161872.g ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.b.b.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c #22 ENSGT00940000158995.b.a #23 ENSGT00940000154369.g.a.g ENSGT01030000234629.C.a.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ENSGT00990000213390 ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y River trout MODERN SPECIES 13 crtc1a (ENSSTUG00000044995) ENSSTUG00000045032 MAST3 (ENSSTUG00000045055) pik3r2 (ENSSTUG00000045156) ifi30 (ENSSTUG00000045291) mpv17l2 (ENSSTUG00000045307) ENSSTUG00000045342 RAB3A (ENSSTUG00000045399) jund (ENSSTUG00000045408) pgpep1 (ENSSTUG00000045411) upf1 (ENSSTUG00000045435) HOMER3 (ENSSTUG00000045507) uba52 (ENSSTUG00000045528) ENSSTUG00000045550 TIMM44 (ENSSTUG00000045610) rab11bb (ENSSTUG00000046273) #22 MARCHF2 (ENSSTUG00000046310) #23 slc25a36a (ENSSTUG00000046315) spsb4a (ENSSTUG00000046366) ENSSTUG00000046370 zgc:136870 (ENSSTUG00000046379) ENSSTUG00000046381 clstn2a (ENSSTUG00000046411) ENSSTUG00000047323 rbp1.1 (ENSSTUG00000047325) copb2 (ENSSTUG00000047339) DVL3 (ENSSTUG00000025749) AP2M1 (ENSSTUG00000025794) pcyt1aa (ENSSTUG00000025829) SERP1 (ENSSTUG00000025883) ENSSTUG00000025900 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000076855 ENSSSAG00000088811 MAST3 (ENSSSAG00000073352) pik3r2 (ENSSSAG00000073374) ifi30 (ENSSSAG00000073631) mpv17l2 (ENSSSAG00000103221) ENSSSAG00000073643 JUND (ENSSSAG00000073669) ENSSSAG00000084399 pgpep1 (ENSSSAG00000073672) upf1 (ENSSSAG00000073685) ENSSSAG00000073735 UBIQ (ENSSSAG00000073744) ENSSSAG00000073752 ENSSSAG00000073759 rab11bb (ENSSSAG00000107231) #22 ENSSSAG00000073798 #23 ENSSSAG00000086180 ENSSSAG00000087588 ENSSSAG00000073809 ENSSSAG00000087769 zgc:136870 (ENSSSAG00000073812) clstn2a (ENSSSAG00000073830) ENSSSAG00000111638 ENSSSAG00000074039 RET1 (ENSSSAG00000074041) RBP2 (ENSSSAG00000074042) copb2 (ENSSSAG00000074067) ENSSSAG00000074540 ENSSSAG00000075127 pcyt1aa (ENSSSAG00000075137) Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00390000010652.D.a.b.d.b ENSGT00940000161872.g ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.f ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c #22 ENSGT00940000158995.b.a #23 ENSGT00940000154369.g.a.g ENSGT01030000234629.C.a.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c Oncorhynchus_a ANCESTRAL SPECIES 37 ENSGT00390000010652.D.a.b.d.b ENSGT00940000161872.g ENSGT00940000157166.d.d ENSGT00940000157050.i.a.d ENSGT00940000164804.a.e ENSGT00940000160620.w.a ENSGT00940000164492.a.a.e ENSGT00940000158959.a.a.a.a ENSGT00940000162806.b.a.g ENSGT00390000015368.a.a.c.h ENSGT00940000157413.h.b ENSGT00940000158081.o.b.c ENSGT00940000153593.e.b.g.b.b.a ENSGT01030000234515.a.b.b.b ENSGT00390000000051.b.b ENSGT00940000163126.a.a.c #22 ENSGT00940000158995.b.a #23 ENSGT00940000154369.g.a.g ENSGT01030000234629.C.a.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000159675.b ENSGT00940000160165.b ENSGT00900000141083.c.a.b ENSGT00950000182903.a.a.d.f ENSGT00940000159223.d.b ENSGT00940000157384.a.c ENSGT00940000161729.m.a.a ENSGT00940000180772 ENSGT00390000011725.d.y ENSGT00390000011127.d.c Coho salmon MODERN SPECIES 23 ENSOKIG00005032699 MED26 (ENSOKIG00005032738) crtc1a (ENSOKIG00005032750) ENSOKIG00005032770 pik3r2 (ENSOKIG00005032870) ifi30 (ENSOKIG00005032978) mpv17l2 (ENSOKIG00005033005) ENSOKIG00005033039 jund (ENSOKIG00005033465) pgpep1 (ENSOKIG00005033478) upf1 (ENSOKIG00005033533) HOMER3 (ENSOKIG00005034071) uba52 (ENSOKIG00005034082) ENSOKIG00005034115 TIMM44 (ENSOKIG00005034165) rab11bb (ENSOKIG00005034516) #22 MARCHF2 (ENSOKIG00005034573) #23 slc25a36a (ENSOKIG00005034598) spsb4a (ENSOKIG00005034605) ENSOKIG00005034614 clstn2a (ENSOKIG00005034701) rbp1.1 (ENSOKIG00005035895) ENSOKIG00005035958 DVL3 (ENSOKIG00005036594) AP2M1 (ENSOKIG00005036681) pcyt1aa (ENSOKIG00005036745) SERP1 (ENSOKIG00005036785) ENSOKIG00005036801 selenot1a (ENSOKIG00005036806) zgc:153615 (ENSOKIG00005036820) ENSOKIG00005036839 Chinook salmon MODERN SPECIES 1 crtc1a (ENSOTSG00005031243) ENSOTSG00005031245 MAST3 (ENSOTSG00005031247) pik3r2 (ENSOTSG00005031258) ifi30 (ENSOTSG00005032065) mpv17l2 (ENSOTSG00005032066) ENSOTSG00005032068 RAB3A (ENSOTSG00005032072) jund (ENSOTSG00005032073) pgpep1 (ENSOTSG00005032074) upf1 (ENSOTSG00005032079) HOMER3 (ENSOTSG00005032705) uba52 (ENSOTSG00005032711) ENSOTSG00005032740 TIMM44 (ENSOTSG00005032758) rab11bb (ENSOTSG00005034280) #22 MARCHF2 (ENSOTSG00005034282) #23 slc25a36a (ENSOTSG00005034288) spsb4a (ENSOTSG00005034296) zgc:136870 (ENSOTSG00005034297) clstn2a (ENSOTSG00005034298) rbp1.1 (ENSOTSG00005034697) rbp2b (ENSOTSG00005034699) copb2 (ENSOTSG00005034708) DVL3 (ENSOTSG00005035208) AP2M1 (ENSOTSG00005035211) pcyt1aa (ENSOTSG00005035227) SERP1 (ENSOTSG00005035228) selenot1a (ENSOTSG00005035229) zgc:153615 (ENSOTSG00005035230) ENSOTSG00005035231 Salmoninae ANCESTRAL SPECIES 76 ENSGT00390000010652.D.a.b.d.a ENSGT00940000161872.h ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.h ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d #22 ENSGT00940000158995.b.b #23 ENSGT00940000154369.g.a.h ENSGT01030000234629.C.a.b ENSGT00950000183086.a.a.b.h.b.d ENSGT00950000183179.b.b ENSGT00940000159675.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 Salmoninae_a ANCESTRAL SPECIES 6 ENSGT00390000010652.D.a.b.d.a ENSGT00940000161872.h ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d #22 ENSGT00940000158995.b.b #23 ENSGT00940000154369.g.a.h ENSGT01030000234629.C.a.b ENSGT00950000183086.a.a.b.h.b.d ENSGT00950000183179.b.b ENSGT00940000159675.a.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00390000010652.D.a.b.d.a ENSGT00940000161872.h ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d #22 ENSGT00940000158995.b.b #23 ENSGT00940000154369.g.a.h ENSGT01030000234629.C.a.b ENSGT00950000183086.a.a.b.h.b.d ENSGT00950000183179.b.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00390000010652.D.a.b.d.a ENSGT00940000161872.h ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d #22 ENSGT00940000158995.b.b #23 ENSGT00940000154369.g.a.h ENSGT01030000234629.C.a.b ENSGT00950000183086.a.a.b.h.b.d ENSGT00950000183179.b.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b ENSGT00990000209702 Coho salmon MODERN SPECIES 19 MED26 (ENSOKIG00005015745) crtc1a (ENSOKIG00005015704) ENSOKIG00005015697 pik3r2 (ENSOKIG00005015619) ifi30 (ENSOKIG00005015563) ENSOKIG00005015543 ENSOKIG00005015505 RAB3A (ENSOKIG00005050655) jund (ENSOKIG00005050651) pgpep1 (ENSOKIG00005050649) upf1 (ENSOKIG00005050636) HOMER3 (ENSOKIG00005050624) uba52 (ENSOKIG00005050621) ENSOKIG00005050619 CTXN1 (ENSOKIG00005050616) rab11bb (ENSOKIG00005050607) #22 MARCHF2 (ENSOKIG00005050598) #23 slc25a36a (ENSOKIG00005050589) TIMM44 (ENSOKIG00005050575) spsb4a (ENSOKIG00005050568) clstn2a (ENSOKIG00005050560) NMNAT3 (ENSOKIG00005050549) rbp1.1 (ENSOKIG00005050546) copb2 (ENSOKIG00005050504) ENSOKIG00005050484 dvl3a (ENSOKIG00005050468) ap2m1a (ENSOKIG00005050452) pcyt1aa (ENSOKIG00005050446) SERP1 (ENSOKIG00005050444) selenot1a (ENSOKIG00005050438) ENSOKIG00005050433 Chinook salmon MODERN SPECIES 2888 ENSOTSG00005027406 MAST3 (ENSOTSG00005027403) pik3r2 (ENSOTSG00005027388) ifi30 (ENSOTSG00005027386) mpv17l2 (ENSOTSG00005027385) ENSOTSG00005027382 RAB3A (ENSOTSG00005027381) jund (ENSOTSG00005027380) pgpep1 (ENSOTSG00005027379) upf1 (ENSOTSG00005027257) HOMER3 (ENSOTSG00005027255) uba52 (ENSOTSG00005027254) ENSOTSG00005027252 CTXN1 (ENSOTSG00005027251) TIMM44 (ENSOTSG00005026371) rab11bb (ENSOTSG00005026342) #22 MARCHF2 (ENSOTSG00005026341) #23 SLC25A36 (ENSOTSG00005026340) slc25a36a (ENSOTSG00005026339) spsb4a (ENSOTSG00005026338) ENSOTSG00005026337 clstn2a (ENSOTSG00005026336) NMNAT3 (ENSOTSG00005026335) rbp1.1 (ENSOTSG00005026334) copb2 (ENSOTSG00005023103) ENSOTSG00005023098 dvl3a (ENSOTSG00005023093) ap2m1a (ENSOTSG00005023092) pcyt1aa (ENSOTSG00005023090) SERP1 (ENSOTSG00005023089) selenot1a (ENSOTSG00005023087) Rainbow trout MODERN SPECIES 20 ENSOMYG00000046900 pik3r2 (ENSOMYG00000046863) ifi30 (ENSOMYG00000046840) ENSOMYG00000046833 ENSOMYG00000046828 ENSOMYG00000046814 ENSOMYG00000046795 jund (ENSOMYG00000046794) pgpep1 (ENSOMYG00000046787) upf1 (ENSOMYG00000046745) ENSOMYG00000046715 uba52 (ENSOMYG00000046709) ENSOMYG00000059679 ENSOMYG00000046700 ENSOMYG00000046644 rab11bb (ENSOMYG00000046591) #22 ENSOMYG00000046583 #23 slc25a36a (ENSOMYG00000046572) ENSOMYG00000058056 spsb4a (ENSOMYG00000046561) clstn2a (ENSOMYG00000046517) NMNAT3 (ENSOMYG00000046471) rbp1.1 (ENSOMYG00000003879) rbp1.1 (ENSOMYG00000073442) copb2 (ENSOMYG00000046308) ENSOMYG00000046266 dvl3a (ENSOMYG00000046247) ENSOMYG00000046211 pcyt1aa (ENSOMYG00000046197) SERP1 (ENSOMYG00000048273) selenot1a (ENSOMYG00000046175) Salmo ANCESTRAL SPECIES 5 ENSGT00390000010652.D.a.b.d.a ENSGT00940000161872.h ENSGT00940000157166.d.c ENSGT00940000157050.i.a.c ENSGT00940000164804.a.f ENSGT00940000160620.w.b ENSGT00940000164492.a.a.f ENSGT00940000158959.a.a.a.b ENSGT00940000162806.b.a.h ENSGT00390000015368.a.a.c.g ENSGT00940000157413.h.a ENSGT00940000158081.o.b.d ENSGT00940000153593.e.b.g.b.a ENSGT00940000154412.C.c.a ENSGT00390000000051.b.a ENSGT00940000163126.a.a.d #22 ENSGT00940000158995.b.b #23 ENSGT00940000154369.g.a.h ENSGT01030000234629.C.a.b ENSGT00950000183086.a.a.b.h.b.d ENSGT00950000183179.b.b ENSGT00940000159675.a.b ENSGT00940000159675.a.a ENSGT00900000141083.c.a.a ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00950000182903.a.a.d.e ENSGT00940000159223.d.a ENSGT00940000157384.a.d ENSGT00940000161729.m.a.b.a.a ENSGT00390000011725.d.z ENSGT00940000153655.A.b River trout MODERN SPECIES 24 ENSSTUG00000047252 ENSSTUG00000047248 MAST3 (ENSSTUG00000047232) pik3r2 (ENSSTUG00000047153) ifi30 (ENSSTUG00000047130) mpv17l2 (ENSSTUG00000047103) ENSSTUG00000047068 RAB3A (ENSSTUG00000047034) jund (ENSSTUG00000047026) pgpep1 (ENSSTUG00000047019) upf1 (ENSSTUG00000046629) HOMER3 (ENSSTUG00000046586) uba52 (ENSSTUG00000046572) CTXN1 (ENSSTUG00000046563) TIMM44 (ENSSTUG00000046222) rab11bb (ENSSTUG00000046172) #22 MARCHF2 (ENSSTUG00000046167) #23 slc25a36a (ENSSTUG00000046079) spsb4a (ENSSTUG00000046068) ENSSTUG00000046064 clstn2a (ENSSTUG00000045666) NMNAT3 (ENSSTUG00000045643) rbp1.1 (ENSSTUG00000045630) rbp1.1 (ENSSTUG00000045623) copb2 (ENSSTUG00000045123) ENSSTUG00000045094 dvl3a (ENSSTUG00000044755) ap2m1a (ENSSTUG00000044679) pcyt1aa (ENSSTUG00000044654) SERP1 (ENSSTUG00000044645) selenot1a (ENSSTUG00000044625) Atlantic salmon MODERN SPECIES 22 ENSSSAG00000076841 crtc1a (ENSSSAG00000114938) ENSSSAG00000076863 MAST3 (ENSSSAG00000076870) pik3r2 (ENSSSAG00000076897) ifi30 (ENSSSAG00000077221) mpv17l2 (ENSSSAG00000077227) ENSSSAG00000077260 ENSSSAG00000085555 jund (ENSSSAG00000077470) upf1 (ENSSSAG00000077507) ENSSSAG00000077729 uba52 (ENSSSAG00000077735) ENSSSAG00000077747 ENSSSAG00000077766 rab11bb (ENSSSAG00000077887) #22 marh2 (ENSSSAG00000077903) #23 slc25a36a (ENSSSAG00000101330) spsb4a (ENSSSAG00000001822) clstn2a (ENSSSAG00000001846) nmnat3 (ENSSSAG00000095565) rbp1.1 (ENSSSAG00000002082) rbp1.1 (ENSSSAG00000084760) copb2 (ENSSSAG00000002265) ENSSSAG00000119258 ENSSSAG00000003034 ap2m1 (ENSSSAG00000072141) ENSSSAG00000099258 ##20 PCY1A (ENSSSAG00000003115) SERP1 (ENSSSAG00000003135) selenot1a (ENSSSAG00000103633) Huchen MODERN SPECIES 430 ENSHHUG00000014634 ENSHHUG00000014609 MAST3 (ENSHHUG00000014602) pik3r2 (ENSHHUG00000014480) ifi30 (ENSHHUG00000014453) ENSHHUG00000014434 RAB3A (ENSHHUG00000014367) jund (ENSHHUG00000014358) pgpep1 (ENSHHUG00000014353) upf1 (ENSHHUG00000014328) HOMER3 (ENSHHUG00000014096) uba52 (ENSHHUG00000013789) ENSHHUG00000013743 CTXN1 (ENSHHUG00000013737) TIMM44 (ENSHHUG00000013704) rab11bb (ENSHHUG00000013675) #22 MARCHF2 (ENSHHUG00000013667) #23 slc25a36a (ENSHHUG00000013659) spsb4a (ENSHHUG00000013651) Northern pike MODERN SPECIES 2 ENSELUG00000026162 MAST3 (ENSELUG00000020448) pik3r2 (ENSELUG00000001241) ifi30 (ENSELUG00000020539) mpv17l2 (ENSELUG00000020559) ENSELUG00000020697 RAB3A (ENSELUG00000032538) jund (ENSELUG00000020828) pgpep1 (ENSELUG00000020843) upf1 (ENSELUG00000020917) HOMER3 (ENSELUG00000020980) uba52 (ENSELUG00000027664) CERS4 (ENSELUG00000020996) CTXN1 (ENSELUG00000000927) TIMM44 (ENSELUG00000021107) rab11bb (ENSELUG00000021148) #22 MARCHF2 (ENSELUG00000000931) #23 slc25a36a (ENSELUG00000021181) spsb4a (ENSELUG00000021197) clstn2a (ENSELUG00000021303) NMNAT3 (ENSELUG00000021366) rbp1.1 (ENSELUG00000021393) rbp2b (ENSELUG00000021410) copb2 (ENSELUG00000021442) dvl3a (ENSELUG00000021493) ap2m1a (ENSELUG00000021515) pcyt1aa (ENSELUG00000021543) zgc:92744 (ENSELUG00000021578) selenot1a (ENSELUG00000021595) ENSELUG00000021606 zgc:153615 (ENSELUG00000021618) Clupeocephala ANCESTRAL SPECIES 2 ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00940000158440.h ENSGT01030000234518.B.a.b.a.b ENSGT01030000234539.a.a.b.a.b.a.a ENSGT00940000158440.g.a ENSGT00940000157505 ENSGT00940000153499.b.b.d.b ENSGT00940000158146.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000155836.B ENSGT01030000234532.B.e.b.e ENSGT01030000234532.B.e.b.f ENSGT00390000009486 ENSGT00530000062962.b.a.f ENSGT00440000038107 ENSGT00940000169185 ENSGT00940000155744 ENSGT00390000008107.c.b ENSGT00940000156926.c ENSGT01030000234614.C ENSGT00940000158575 ENSGT00390000017366 Euteleosteomorpha ANCESTRAL SPECIES 39 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 Acanthomorphata ANCESTRAL SPECIES 11 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00390000000051.a ENSGT00940000154412.C.c.b ENSGT00950000183158.B.a.a ENSGT00940000154412.C.d ENSGT00950000183158.A ENSGT01030000234515.a.b.b.a ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000159993 ENSGT00940000155138 ENSGT00390000014000 ENSGT00950000182983.B.a.a Cod DUPLICATION Cod MODERN SPECIES 3 ENSGMOG00000013427 use1 (ENSGMOG00000013419) insrb (ENSGMOG00000013387) ENSGMOG00000013360 enc3 (ENSGMOG00000013346) timm13 (ENSGMOG00000025635) ENSGMOG00000034913 lsm7 (ENSGMOG00000024901) ENSGMOG00000035622 fbn2b (ENSGMOG00000009755) ENSGMOG00000019896 ENSGMOG00000023674 timm44 (ENSGMOG00000009739) ENSGMOG00000009724 ENSGMOG00000024419 ENSGMOG00000009668 #22 ENSGMOG00000007379 ENSGMOG00000007390 #22 ENSGMOG00000007397 #23 ENSGMOG00000029276 ENSGMOG00000007615 ENSGMOG00000007579 ENSGMOG00000035156 tjp3 (ENSGMOG00000007562) ENSGMOG00000007542 tm6sf2b (ENSGMOG00000007532) hapln4 (ENSGMOG00000025168) NCAN (ENSGMOG00000007508) ENSGMOG00000027912 ENSGMOG00000007504 nr2c2ap (ENSGMOG00000035239) Cod MODERN SPECIES 3 insrb (ENSGMOG00000013387) ENSGMOG00000013360 enc3 (ENSGMOG00000013346) timm13 (ENSGMOG00000025635) ENSGMOG00000034913 lsm7 (ENSGMOG00000024901) ENSGMOG00000035622 fbn2b (ENSGMOG00000009755) ENSGMOG00000019896 ENSGMOG00000023674 timm44 (ENSGMOG00000009739) ENSGMOG00000009724 ENSGMOG00000024419 ENSGMOG00000009668 #22 ENSGMOG00000007379 ENSGMOG00000007390 #22 ENSGMOG00000007397 #23 ENSGMOG00000029276 ENSGMOG00000007615 ENSGMOG00000007579 ENSGMOG00000035156 tjp3 (ENSGMOG00000007562) ENSGMOG00000007542 tm6sf2b (ENSGMOG00000007532) hapln4 (ENSGMOG00000025168) NCAN (ENSGMOG00000007508) ENSGMOG00000027912 ENSGMOG00000007504 nr2c2ap (ENSGMOG00000035239) rfxank (ENSGMOG00000007488) borcs8 (ENSGMOG00000007484) Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000170739 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00390000000051.a ENSGT00940000154412.C.c.b ENSGT00950000183158.A ENSGT01030000234515.a.b.b.a ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000159993 ENSGT00940000155138 ENSGT00390000014000 ENSGT00950000182983.B.a.a ENSGT00940000157375.c ENSGT00940000155404.i.b Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 18 ncln (ENSMMDG00005005859) s1pr4 (ENSMMDG00005005872) MYO9B (ENSMMDG00005006005) use1 (ENSMMDG00005010388) insrb (ENSMMDG00005010402) ARHGEF18 (ENSMMDG00005010427) enc3 (ENSMMDG00005010431) timm13 (ENSMMDG00005010433) ENSMMDG00005010439 lsm7 (ENSMMDG00005010441) cers4a (ENSMMDG00005010450) fbn2b (ENSMMDG00005010538) CTXN1 (ENSMMDG00005011180) timm44 (ENSMMDG00005011188) hnrnpm (ENSMMDG00005011253) ENSMMDG00005011283 #22 marchf2 (ENSMMDG00005011285) #23 ENSMMDG00005011287 #22 PIP5K1C (ENSMMDG00005011290) ENSMMDG00005011292 ENSMMDG00005011293 POLR2E (ENSMMDG00005011297) ARHGAP45 (ENSMMDG00005011391) tjp3 (ENSMMDG00005014918) SBNO2 (ENSMMDG00005015169) tm6sf2b (ENSMMDG00005015173) hapln4 (ENSMMDG00005015178) NCAN (ENSMMDG00005015187) ENSMMDG00005015200 nr2c2ap (ENSMMDG00005015202) rfxank (ENSMMDG00005015205) Pinecone sodierfish MODERN SPECIES 18 ENSMMDG00005015210 borcs8 (ENSMMDG00005015208) rfxank (ENSMMDG00005015205) nr2c2ap (ENSMMDG00005015202) ENSMMDG00005015200 NCAN (ENSMMDG00005015187) hapln4 (ENSMMDG00005015178) tm6sf2b (ENSMMDG00005015173) SBNO2 (ENSMMDG00005015169) tjp3 (ENSMMDG00005014918) ARHGAP45 (ENSMMDG00005011391) POLR2E (ENSMMDG00005011297) ENSMMDG00005011293 ENSMMDG00005011292 PIP5K1C (ENSMMDG00005011290) ENSMMDG00005011287 #22 marchf2 (ENSMMDG00005011285) #23 ENSMMDG00005011283 #22 hnrnpm (ENSMMDG00005011253) timm44 (ENSMMDG00005011188) CTXN1 (ENSMMDG00005011180) fbn2b (ENSMMDG00005010538) cers4a (ENSMMDG00005010450) lsm7 (ENSMMDG00005010441) ENSMMDG00005010439 timm13 (ENSMMDG00005010433) enc3 (ENSMMDG00005010431) ARHGEF18 (ENSMMDG00005010427) insrb (ENSMMDG00005010402) use1 (ENSMMDG00005010388) MYO9B (ENSMMDG00005006005) Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000170739 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00990000205848 Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 469 amh (ENSHCOG00000001199) DOT1L (ENSHCOG00000001086) ell (ENSHCOG00000001070) fkbp8 (ENSHCOG00000001065) ssbp4 (ENSHCOG00000001058) ENSHCOG00000001053 tmem59l (ENSHCOG00000001047) serbp1a (ENSHCOG00000001044) hsd17b7 (ENSHCOG00000000044) DDR2 (ENSHCOG00000001029) uap1 (ENSHCOG00000001019) ubxn6 (ENSHCOG00000001010) chaf1a (ENSHCOG00000001004) fsd1 (ENSHCOG00000000994) ENSHCOG00000000990 ENSHCOG00000000985 #22 marchf2 (ENSHCOG00000000979) #23 ENSHCOG00000000954 #22 PIP5K1C (ENSHCOG00000000914) gpx4b (ENSHCOG00000000909) ENSHCOG00000000907 POLR2E (ENSHCOG00000000906) ARHGAP45 (ENSHCOG00000000898) tjp3 (ENSHCOG00000000890) SBNO2 (ENSHCOG00000000884) tm6sf2b (ENSHCOG00000000879) ENSHCOG00000021084 ENSHCOG00000000538 nr2c2ap (ENSHCOG00000020130) rfxank (ENSHCOG00000020050) borcs8 (ENSHCOG00000020036) Tiger tail seahorse MODERN SPECIES 469 ENSHCOG00000019979 ENSHCOG00000019994 borcs8 (ENSHCOG00000020036) rfxank (ENSHCOG00000020050) nr2c2ap (ENSHCOG00000020130) ENSHCOG00000000538 ENSHCOG00000021084 tm6sf2b (ENSHCOG00000000879) SBNO2 (ENSHCOG00000000884) tjp3 (ENSHCOG00000000890) ARHGAP45 (ENSHCOG00000000898) POLR2E (ENSHCOG00000000906) ENSHCOG00000000907 gpx4b (ENSHCOG00000000909) PIP5K1C (ENSHCOG00000000914) ENSHCOG00000000954 #22 marchf2 (ENSHCOG00000000979) #23 ENSHCOG00000000985 #22 ENSHCOG00000000990 fsd1 (ENSHCOG00000000994) chaf1a (ENSHCOG00000001004) ubxn6 (ENSHCOG00000001010) uap1 (ENSHCOG00000001019) DDR2 (ENSHCOG00000001029) hsd17b7 (ENSHCOG00000000044) serbp1a (ENSHCOG00000001044) tmem59l (ENSHCOG00000001047) ENSHCOG00000001053 ssbp4 (ENSHCOG00000001058) fkbp8 (ENSHCOG00000001065) ell (ENSHCOG00000001070) Percomorphaceae_B DUPLICATION Percomorphaceae_B DUPLICATION Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00950000182879.a.b.b.a.b ENSGT00990000205848 ENSGT00950000182879.a.b.b.b.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000170739 ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 Ovalentaria ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Pomacentridae ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Spiny chromis MODERN SPECIES 7 mef2b (ENSAPOG00000003469) ENSAPOG00000003437 borcs8 (ENSAPOG00000003430) rfxank (ENSAPOG00000003419) borcs8 (ENSAPOG00000003405) nr2c2ap (ENSAPOG00000003388) NCAN (ENSAPOG00000003363) hapln4 (ENSAPOG00000003340) tm6sf2b (ENSAPOG00000003293) SBNO2 (ENSAPOG00000003185) tjp3 (ENSAPOG00000003035) ARHGAP45 (ENSAPOG00000002977) POLR2E (ENSAPOG00000002935) gpx4a (ENSAPOG00000002909) PIP5K1C (ENSAPOG00000002871) ENSAPOG00000002846 #22 marchf2 (ENSAPOG00000002834) #23 ENSAPOG00000002812 npffl (ENSAPOG00000002802) ITGA7 (ENSAPOG00000002786) ENSAPOG00000002743 ENSAPOG00000002728 alas1 (ENSAPOG00000002715) POC1A (ENSAPOG00000002677) dusp7 (ENSAPOG00000002599) rpl29 (ENSAPOG00000002586) iars1 (ENSAPOG00000002559) ENSAPOG00000002460 Cichlidae ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Lyretail cichlid MODERN SPECIES 473 ENSNBRG00000001441 timm8b (ENSNBRG00000001427) ENSNBRG00000001368 ENSNBRG00000001342 ENSNBRG00000001305 ADAMTS8 (ENSNBRG00000001282) zbtb44 (ENSNBRG00000001248) ENSNBRG00000001228 #22 ENSNBRG00000001204 ENSNBRG00000001179 zgc:113279 (ENSNBRG00000001142) ENSNBRG00000001129 ENSNBRG00000001097 ENSNBRG00000001065 ENSNBRG00000001018 arcn1b (ENSNBRG00000000980) hmbsa (ENSNBRG00000000925) UBASH3B (ENSNBRG00000000867) ENSNBRG00000000594 usf1l (ENSNBRG00000000575) ENSNBRG00000000537 ENSNBRG00000000525 ENSNBRG00000000497 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Carangaria ANCESTRAL SPECIES 7 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Carangaria_A ANCESTRAL SPECIES 3 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Seriola ANCESTRAL SPECIES 21 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Yellowtail amberjack MODERN SPECIES 2677 cyp2n13 (ENSSLDG00000006741) cyp2n13 (ENSSLDG00000006366) ENSSLDG00000006282 cyp2p6 (ENSSLDG00000006265) ENSSLDG00000006070 serbp1a (ENSSLDG00000005983) hsd17b7 (ENSSLDG00000005949) DDR2 (ENSSLDG00000005869) uap1 (ENSSLDG00000005767) ubxn6 (ENSSLDG00000005723) chaf1a (ENSSLDG00000005531) scamp4 (ENSSLDG00000005492) si:ch211-129c21.1 (ENSSLDG00000005355) fsd1 (ENSSLDG00000005330) stap2b (ENSSLDG00000005300) ENSSLDG00000005275 #22 marchf2 (ENSSLDG00000005251) #23 rab11ba (ENSSLDG00000005221) #24 PIP5K1C (ENSSLDG00000005123) gpx4a (ENSSLDG00000005019) POLR2E (ENSSLDG00000004965) ARHGAP45 (ENSSLDG00000004808) tjp3 (ENSSLDG00000004734) SBNO2 (ENSSLDG00000004623) tm6sf2b (ENSSLDG00000004534) hapln4 (ENSSLDG00000004510) ENSSLDG00000004487 Greater amberjack MODERN SPECIES 110 cyp2n13 (ENSSDUG00000001817) cyp2ad2 (ENSSDUG00000002386) cyp2p6 (ENSSDUG00000002402) ENSSDUG00000002420 il12rb2 (ENSSDUG00000002457) serbp1a (ENSSDUG00000002481) hsd17b7 (ENSSDUG00000002521) DDR2 (ENSSDUG00000002557) uap1 (ENSSDUG00000002609) ubxn6 (ENSSDUG00000002654) chaf1a (ENSSDUG00000002692) scamp4 (ENSSDUG00000002782) si:ch211-129c21.1 (ENSSDUG00000002808) fsd1 (ENSSDUG00000002877) ENSSDUG00000002896 ENSSDUG00000002934 #22 marchf2 (ENSSDUG00000002943) #23 rab11ba (ENSSDUG00000002965) #24 PIP5K1C (ENSSDUG00000003016) gpx4a (ENSSDUG00000003134) POLR2E (ENSSDUG00000003352) ARHGAP45 (ENSSDUG00000003398) tjp3 (ENSSDUG00000003464) SBNO2 (ENSSDUG00000003527) tm6sf2b (ENSSDUG00000003677) hapln4 (ENSSDUG00000003705) NCAN (ENSSDUG00000003738) nr2c2ap (ENSSDUG00000003792) rfxank (ENSSDUG00000003808) borcs8 (ENSSDUG00000003834) ENSSDUG00000003853 Barramundi perch MODERN SPECIES 117 cyp2ad2 (ENSLCAG00010009170) ENSLCAG00010009182 ENSLCAG00010009217 ENSLCAG00010009325 ENSLCAG00010009335 serbp1a (ENSLCAG00010009339) hsd17b7 (ENSLCAG00010009344) DDR2 (ENSLCAG00010009354) uap1 (ENSLCAG00010009388) ubxn6 (ENSLCAG00010009444) chaf1a (ENSLCAG00010009454) scamp4 (ENSLCAG00010009459) si:ch211-129c21.1 (ENSLCAG00010009466) fsd1 (ENSLCAG00010009482) ENSLCAG00010009530 ENSLCAG00010009549 #22 marchf2 (ENSLCAG00010009622) #23 ENSLCAG00010009646 #22 PIP5K1C (ENSLCAG00010009759) GPX4 (ENSLCAG00010009902) POLR2E (ENSLCAG00010009937) ARHGAP45 (ENSLCAG00010009991) tjp3 (ENSLCAG00010010039) SBNO2 (ENSLCAG00010010136) tm6sf2b (ENSLCAG00010010289) hapln4 (ENSLCAG00010010292) NCAN (ENSLCAG00010010308) nr2c2ap (ENSLCAG00010010359) rfxank (ENSLCAG00010010363) borcs8 (ENSLCAG00010010369) ENSLCAG00010010378 Pleuronectoidei ANCESTRAL SPECIES 29 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Turbot MODERN SPECIES 3 cyp2n13 (ENSSMAG00000018331) cyp2ad2 (ENSSMAG00000018341) cyp2p6 (ENSSMAG00000018344) il23r (ENSSMAG00000018352) ENSSMAG00000026117 il12rb2 (ENSSMAG00000018366) serbp1a (ENSSMAG00000018372) ENSSMAG00000018395 uap1 (ENSSMAG00000018456) ubxn6 (ENSSMAG00000018472) chaf1a (ENSSMAG00000018482) scamp4 (ENSSMAG00000018501) si:ch211-129c21.1 (ENSSMAG00000018515) ENSSMAG00000018528 ENSSMAG00000018573 ENSSMAG00000022469 #22 ENSSMAG00000018632 #23 ENSSMAG00000018613 #22 ENSSMAG00000012826 ENSSMAG00000012809 ENSSMAG00000012782 ENSSMAG00000012720 tjp3 (ENSSMAG00000012656) ENSSMAG00000012489 tm6sf2b (ENSSMAG00000012464) hapln4 (ENSSMAG00000012455) NCAN (ENSSMAG00000012434) nr2c2ap (ENSSMAG00000012414) rfxank (ENSSMAG00000012403) borcs8 (ENSSMAG00000012397) ENSSMAG00000012394 Anabantaria ANCESTRAL SPECIES 7 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000170739 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Anabantoidei ANCESTRAL SPECIES 6 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.a.b.a.a ENSGT00950000182879.a.b.b.a.a.a.b.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Climbing perch MODERN SPECIES 17 ENSATEG00000029722 ENSATEG00000023563 ENSATEG00000025483 il23r (ENSATEG00000023627) il12rb2 (ENSATEG00000023631) serbp1a (ENSATEG00000023637) hsd17b7 (ENSATEG00000023642) ENSATEG00000023653 uap1 (ENSATEG00000023663) ubxn6 (ENSATEG00000023678) chaf1a (ENSATEG00000023683) scamp4 (ENSATEG00000026734) si:ch211-129c21.1 (ENSATEG00000023698) ENSATEG00000023710 ENSATEG00000023717 ENSATEG00000023725 #22 ENSATEG00000029113 #23 ENSATEG00000026681 #24 ENSATEG00000023737 ENSATEG00000026865 ENSATEG00000023754 ENSATEG00000023760 ENSATEG00000023771 tjp3 (ENSATEG00000023807) ENSATEG00000023838 tm6sf2b (ENSATEG00000023880) hapln4 (ENSATEG00000023886) NCAN (ENSATEG00000027153) nr2c2ap (ENSATEG00000023912) rfxank (ENSATEG00000023913) borcs8 (ENSATEG00000023918) Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000008296 ENSBSLG00000002932 ENSBSLG00000002883 ENSBSLG00000002861 ENSBSLG00000002853 ENSBSLG00000002688 ENSBSLG00000002531 ENSBSLG00000002330 cyp2n13 (ENSBSLG00000002192) ubxn6 (ENSBSLG00000002128) chaf1a (ENSBSLG00000002124) scamp4 (ENSBSLG00000002123) si:ch211-129c21.1 (ENSBSLG00000002120) fsd1 (ENSBSLG00000002119) ENSBSLG00000002116 ENSBSLG00000002114 #22 marchf2 (ENSBSLG00000002112) #23 rab11ba (ENSBSLG00000002110) #24 ENSBSLG00000002090 ENSBSLG00000002082 ENSBSLG00000002081 POLR2E (ENSBSLG00000002078) ARHGAP45 (ENSBSLG00000002076) tjp3 (ENSBSLG00000002071) SBNO2 (ENSBSLG00000002058) tm6sf2b (ENSBSLG00000002053) hapln4 (ENSBSLG00000002051) NCAN (ENSBSLG00000002045) nr2c2ap (ENSBSLG00000002042) rfxank (ENSBSLG00000002041) borcs8 (ENSBSLG00000002040) Zig-zag eel MODERN SPECIES 18 cyp2ad2 (ENSMAMG00000017916) ENSMAMG00000024287 ENSMAMG00000018106 il23r (ENSMAMG00000018157) il12rb2 (ENSMAMG00000018218) serbp1a (ENSMAMG00000018229) hsd17b7 (ENSMAMG00000018239) ENSMAMG00000018316 uap1 (ENSMAMG00000018365) ubxn6 (ENSMAMG00000018397) chaf1a (ENSMAMG00000018408) scamp4 (ENSMAMG00000025900) si:ch211-129c21.1 (ENSMAMG00000018435) ENSMAMG00000018455 ENSMAMG00000027773 ENSMAMG00000018533 #22 ENSMAMG00000018541 #23 ENSMAMG00000018556 #24 ENSMAMG00000018576 ENSMAMG00000027280 ENSMAMG00000018612 ENSMAMG00000018703 ENSMAMG00000018688 tjp3 (ENSMAMG00000018725) ENSMAMG00000018758 tm6sf2b (ENSMAMG00000018786) hapln4 (ENSMAMG00000018807) NCAN (ENSMAMG00000018829) nr2c2ap (ENSMAMG00000018892) rfxank (ENSMAMG00000024265) borcs8 (ENSMAMG00000025610) Eupercaria ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.a #22 Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Gilthead seabream MODERN SPECIES 2 cyp2ad2 (ENSSAUG00010013482) ENSSAUG00010013483 ENSSAUG00010013489 ENSSAUG00010013509 il12rb2 (ENSSAUG00010013514) serbp1a (ENSSAUG00010013520) hsd17b7 (ENSSAUG00010013522) DDR2 (ENSSAUG00010013526) uap1 (ENSSAUG00010013654) ubxn6 (ENSSAUG00010013663) chaf1a (ENSSAUG00010001309) scamp4 (ENSSAUG00010001324) si:ch211-129c21.1 (ENSSAUG00010001339) fsd1 (ENSSAUG00010001434) stap2b (ENSSAUG00010002471) ENSSAUG00010002477 #22 marchf2 (ENSSAUG00010002517) #23 ENSSAUG00010002528 #22 PIP5K1C (ENSSAUG00010002590) GPX4a (ENSSAUG00010002689) POLR2E (ENSSAUG00010002703) ARHGAP45 (ENSSAUG00010002870) tjp3 (ENSSAUG00010004595) SBNO2 (ENSSAUG00010004636) tm6sf2b (ENSSAUG00010005435) hapln4 (ENSSAUG00010005438) NCAN (ENSSAUG00010005441) nr2c2ap (ENSSAUG00010005447) rfxank (ENSSAUG00010005451) borcs8 (ENSSAUG00010005457) ENSSAUG00010005461 Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Large yellow croaker MODERN SPECIES 489 cyp2n13 (ENSLCRG00005009708) cyp2ad2 (ENSLCRG00005009712) cyp2p6 (ENSLCRG00005009714) ENSLCRG00005009743 il12rb2 (ENSLCRG00005009750) serbp1a (ENSLCRG00005009754) hsd17b7 (ENSLCRG00005009755) DDR2 (ENSLCRG00005009764) uap1 (ENSLCRG00005009993) ubxn6 (ENSLCRG00005010461) chaf1a (ENSLCRG00005010464) scamp4 (ENSLCRG00005010467) si:ch211-129c21.1 (ENSLCRG00005010474) fsd1 (ENSLCRG00005010479) stap2b (ENSLCRG00005010729) ENSLCRG00005010733 #22 marchf2 (ENSLCRG00005010768) #23 ENSLCRG00005010771 #22 PIP5K1C (ENSLCRG00005010821) ENSLCRG00005010836 ENSLCRG00005010838 POLR2E (ENSLCRG00005010845) ARHGAP45 (ENSLCRG00005010869) tjp3 (ENSLCRG00005013525) SBNO2 (ENSLCRG00005013651) tm6sf2b (ENSLCRG00005013801) hapln4 (ENSLCRG00005013806) NCAN (ENSLCRG00005013811) nr2c2ap (ENSLCRG00005013815) ENSLCRG00005013816 rfxank (ENSLCRG00005013817) European seabass DUPLICATION European seabass MODERN SPECIES 17 ENSDLAG00005018472 ENSDLAG00005018361 ENSDLAG00005018334 il12rb2 (ENSDLAG00005018307) serbp1a (ENSDLAG00005018281) hsd17b7 (ENSDLAG00005018188) ENSDLAG00005033891 ENSDLAG00005030851 uap1 (ENSDLAG00005017768) ubxn6 (ENSDLAG00005017721) chaf1a (ENSDLAG00005017698) scamp4 (ENSDLAG00005026827) si:ch211-129c21.1 (ENSDLAG00005017682) ENSDLAG00005017525 ENSDLAG00005027138 ENSDLAG00005030419 #22 ENSDLAG00005027338 #23 ENSDLAG00005028338 #22 ENSDLAG00005016577 ENSDLAG00005030390 ENSDLAG00005015927 tjp3 (ENSDLAG00005015783) ENSDLAG00005014474 tm6sf2b (ENSDLAG00005014398) hapln4 (ENSDLAG00005014355) ENSDLAG00005014345 nr2c2ap (ENSDLAG00005032286) NCAN (ENSDLAG00005014279) borcs8 (ENSDLAG00005014232) ENSDLAG00005032654 mef2b (ENSDLAG00005014201) European seabass MODERN SPECIES 17 ENSDLAG00005014149 tmem161a (ENSDLAG00005014167) mef2b (ENSDLAG00005014201) ENSDLAG00005032654 borcs8 (ENSDLAG00005014232) NCAN (ENSDLAG00005014279) nr2c2ap (ENSDLAG00005032286) ENSDLAG00005014345 hapln4 (ENSDLAG00005014355) tm6sf2b (ENSDLAG00005014398) ENSDLAG00005014474 tjp3 (ENSDLAG00005015783) ENSDLAG00005015927 ENSDLAG00005030390 ENSDLAG00005016577 ENSDLAG00005028338 #22 ENSDLAG00005027338 #23 ENSDLAG00005030419 #22 ENSDLAG00005027138 ENSDLAG00005017525 si:ch211-129c21.1 (ENSDLAG00005017682) scamp4 (ENSDLAG00005026827) chaf1a (ENSDLAG00005017698) ubxn6 (ENSDLAG00005017721) uap1 (ENSDLAG00005017768) ENSDLAG00005030851 ENSDLAG00005033891 hsd17b7 (ENSDLAG00005018188) serbp1a (ENSDLAG00005018281) il12rb2 (ENSDLAG00005018307) ENSDLAG00005018334 Perciformes ANCESTRAL SPECIES 8 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Perciformes_a ANCESTRAL SPECIES 6 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Pike perch MODERN SPECIES 34 cyp2n13 (ENSSLUG00000002946) cyp2ad2 (ENSSLUG00000002615) cyp2p6 (ENSSLUG00000002333) il23r (ENSSLUG00000002297) il12rb2 (ENSSLUG00000002283) serbp1a (ENSSLUG00000002274) hsd17b7 (ENSSLUG00000002265) DDR2 (ENSSLUG00000002178) uap1 (ENSSLUG00000001973) ubxn6 (ENSSLUG00000001897) chaf1a (ENSSLUG00000001864) scamp4 (ENSSLUG00000001841) si:ch211-129c21.1 (ENSSLUG00000001831) fsd1 (ENSSLUG00000001801) stap2b (ENSSLUG00000001757) ENSSLUG00000001708 #22 marchf2 (ENSSLUG00000001696) #23 ENSSLUG00000001628 #22 PIP5K1C (ENSSLUG00000001546) gpx4b (ENSSLUG00000001474) POLR2E (ENSSLUG00000015773) ARHGAP45 (ENSSLUG00000015210) tjp3 (ENSSLUG00000015106) SBNO2 (ENSSLUG00000014942) tm6sf2b (ENSSLUG00000014884) hapln4 (ENSSLUG00000014874) NCAN (ENSSLUG00000014815) nr2c2ap (ENSSLUG00000014797) rfxank (ENSSLUG00000014793) borcs8 (ENSSLUG00000014783) ENSSLUG00000014781 Channel bull blenny MODERN SPECIES 18 ENSCGOG00000005038 cyp2ad2 (ENSCGOG00000005139) ENSCGOG00000005746 ENSCGOG00000005804 il12rb2 (ENSCGOG00000005818) serbp1a (ENSCGOG00000005820) hsd17b7 (ENSCGOG00000005828) DDR2 (ENSCGOG00000005853) uap1 (ENSCGOG00000006032) ubxn6 (ENSCGOG00000006305) chaf1a (ENSCGOG00000006388) scamp4 (ENSCGOG00000006393) si:ch211-129c21.1 (ENSCGOG00000006397) fsd1 (ENSCGOG00000006417) stap2b (ENSCGOG00000006669) ENSCGOG00000006672 #22 marchf2 (ENSCGOG00000006710) #23 rab11ba (ENSCGOG00000006718) #24 PIP5K1C (ENSCGOG00000006876) gpx4b (ENSCGOG00000008676) POLR2E (ENSCGOG00000008693) ARHGAP45 (ENSCGOG00000008902) tjp3 (ENSCGOG00000009463) ENSCGOG00000009472 SBNO2 (ENSCGOG00000009556) tm6sf2b (ENSCGOG00000011563) hapln4 (ENSCGOG00000011564) NCAN (ENSCGOG00000011574) nr2c2ap (ENSCGOG00000011680) rfxank (ENSCGOG00000011672) borcs8 (ENSCGOG00000011683) Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000170739 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000163126.a.b.h #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a Ovalentaria ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Oryzias ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Oryzias_b ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Javanese ricefish MODERN SPECIES 18 dpt (ENSOJAG00000000754) tp63 (ENSOJAG00000000722) tprg1 (ENSOJAG00000000690) lpp (ENSOJAG00000000677) bcl6aa (ENSOJAG00000000663) smx5 (ENSOJAG00000000656) INPP5D (ENSOJAG00000000617) GPR17 (ENSOJAG00000000598) sap130a (ENSOJAG00000000219) amotl2a (ENSOJAG00000000111) tjp3 (ENSOJAG00000000075) ARHGAP45 (ENSOJAG00000012312) POLR2E (ENSOJAG00000012258) ENSOJAG00000012200 PIP5K1C (ENSOJAG00000011858) ENSOJAG00000011713 #22 marchf2 (ENSOJAG00000011638) #23 ENSOJAG00000011571 #22 ENSOJAG00000011563 fsd1 (ENSOJAG00000011289) si:ch211-129c21.1 (ENSOJAG00000011106) scamp4 (ENSOJAG00000011088) chaf1a (ENSOJAG00000010834) ubxn6 (ENSOJAG00000010684) uap1 (ENSOJAG00000010356) DDR2 (ENSOJAG00000010035) hsd17b7 (ENSOJAG00000009979) serbp1a (ENSOJAG00000009965) il12rb2 (ENSOJAG00000009941) ENSOJAG00000009859 ENSOJAG00000009646 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 NAME_4 ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Sheepshead minnow MODERN SPECIES 645 CILP2 (ENSCVAG00000021333) si:ch211-212d10.2 (ENSCVAG00000021274) ENSCVAG00000021235 ENSCVAG00000021225 ENSCVAG00000021107 ENSCVAG00000020155 ENSCVAG00000020126 ENSCVAG00000020119 rfc4 (ENSCVAG00000000953) ENSCVAG00000020066 tjp3 (ENSCVAG00000020046) ARHGAP45 (ENSCVAG00000020037) POLR2E (ENSCVAG00000019940) gpx4a (ENSCVAG00000000952) PIP5K1C (ENSCVAG00000019806) ENSCVAG00000019751 #22 marchf2 (ENSCVAG00000019726) #23 ENSCVAG00000019718 #22 ENSCVAG00000019709 fsd1 (ENSCVAG00000019699) si:ch211-129c21.1 (ENSCVAG00000019671) scamp4 (ENSCVAG00000019655) chaf1a (ENSCVAG00000019631) ubxn6 (ENSCVAG00000019485) Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Turquoise killifish MODERN SPECIES 1626 MAU2 (ENSNFUG00015023708) Nfu_g_1_016063 (ENSNFUG00015023720) COL8A1B (ENSNFUG00015023724) NCAN (ENSNFUG00015023728) ENSNFUG00015023738 HAPLN4 (ENSNFUG00015023742) TM6SF2 (ENSNFUG00015023757) SBNO2 (ENSNFUG00015005495) tjp3 (ENSNFUG00015007703) ARHGAP45 (ENSNFUG00015007804) POLR2E (ENSNFUG00015008738) ENSNFUG00015008747 ENSNFUG00015008750 PIP5K1CA (ENSNFUG00015008755) rab11ba (ENSNFUG00015008781) #24 ENSNFUG00015008809 #22 MARCH2 (ENSNFUG00015008870) #23 ENSNFUG00015008879 FSD1 (ENSNFUG00015008936) Nfu_g_1_016014 (ENSNFUG00015009142) scamp4 (ENSNFUG00015009164) CHAF1A (ENSNFUG00015009179) UBXN6 (ENSNFUG00015009225) uap1 (ENSNFUG00015009448) DDR2 (ENSNFUG00015009566) HSD17B7 (ENSNFUG00015010348) SERBP1 (ENSNFUG00015010402) il12rb2 (ENSNFUG00015010436) ENSNFUG00015010453 echdc2 (ENSNFUG00015010470) zyg11 (ENSNFUG00015010519) Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000163126.a.b.h #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Carangaria ANCESTRAL SPECIES 7 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d Carangaria_A ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 1241 PIP5K1C (ENSLCAG00010013594) ENSLCAG00010013579 #22 ENSLCAG00010013576 Barramundi perch MODERN SPECIES 117 tmem161a (ENSLCAG00010010389) mef2b (ENSLCAG00010010385) ENSLCAG00010010378 borcs8 (ENSLCAG00010010369) rfxank (ENSLCAG00010010363) nr2c2ap (ENSLCAG00010010359) NCAN (ENSLCAG00010010308) hapln4 (ENSLCAG00010010292) tm6sf2b (ENSLCAG00010010289) SBNO2 (ENSLCAG00010010136) tjp3 (ENSLCAG00010010039) ARHGAP45 (ENSLCAG00010009991) POLR2E (ENSLCAG00010009937) GPX4 (ENSLCAG00010009902) PIP5K1C (ENSLCAG00010009759) ENSLCAG00010009646 #22 marchf2 (ENSLCAG00010009622) #23 ENSLCAG00010009549 #22 ENSLCAG00010009530 fsd1 (ENSLCAG00010009482) si:ch211-129c21.1 (ENSLCAG00010009466) scamp4 (ENSLCAG00010009459) chaf1a (ENSLCAG00010009454) ubxn6 (ENSLCAG00010009444) uap1 (ENSLCAG00010009388) DDR2 (ENSLCAG00010009354) hsd17b7 (ENSLCAG00010009344) serbp1a (ENSLCAG00010009339) ENSLCAG00010009335 ENSLCAG00010009325 ENSLCAG00010009217 Pleuronectoidei ANCESTRAL SPECIES 29 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000163126.a.b.h #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a Turbot MODERN SPECIES 3 ENSSMAG00000012306 tmem161a (ENSSMAG00000012340) ENSSMAG00000012394 borcs8 (ENSSMAG00000012397) rfxank (ENSSMAG00000012403) nr2c2ap (ENSSMAG00000012414) NCAN (ENSSMAG00000012434) hapln4 (ENSSMAG00000012455) tm6sf2b (ENSSMAG00000012464) ENSSMAG00000012489 tjp3 (ENSSMAG00000012656) ENSSMAG00000012720 ENSSMAG00000012782 ENSSMAG00000012809 ENSSMAG00000012826 ENSSMAG00000018613 #22 ENSSMAG00000018632 #23 ENSSMAG00000022469 #22 ENSSMAG00000018573 ENSSMAG00000018528 si:ch211-129c21.1 (ENSSMAG00000018515) scamp4 (ENSSMAG00000018501) chaf1a (ENSSMAG00000018482) ubxn6 (ENSSMAG00000018472) uap1 (ENSSMAG00000018456) ENSSMAG00000018395 serbp1a (ENSSMAG00000018372) il12rb2 (ENSSMAG00000018366) ENSSMAG00000026117 il23r (ENSSMAG00000018352) cyp2p6 (ENSSMAG00000018344) Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.h #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000163126.a.b.h #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b Perciformes ANCESTRAL SPECIES 8 ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000163126.a.b.h #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d Cottioidei ANCESTRAL SPECIES 5 ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.h #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b Lumpfish MODERN SPECIES 19 CILP2 (ENSCLMG00005000493) yjefn3 (ENSCLMG00005000522) gatad2ab (ENSCLMG00005000526) MAU2 (ENSCLMG00005000533) SLC25A42 (ENSCLMG00005000576) NCAN (ENSCLMG00005000748) ENSCLMG00005000768 hapln4 (ENSCLMG00005000769) tm6sf2b (ENSCLMG00005000771) SBNO2 (ENSCLMG00005000780) tjp3 (ENSCLMG00005001533) ARHGAP45 (ENSCLMG00005001826) POLR2E (ENSCLMG00005007020) ENSCLMG00005007028 PIP5K1C (ENSCLMG00005007030) ENSCLMG00005007178 #22 marchf2 (ENSCLMG00005007179) #23 ENSCLMG00005007180 #22 stap2b (ENSCLMG00005007183) fsd1 (ENSCLMG00005007185) si:ch211-129c21.1 (ENSCLMG00005007188) scamp4 (ENSCLMG00005007191) chaf1a (ENSCLMG00005007194) ubxn6 (ENSCLMG00005007308) uap1 (ENSCLMG00005007686) DDR2 (ENSCLMG00005007715) hsd17b7 (ENSCLMG00005008184) serbp1a (ENSCLMG00005008195) il12rb2 (ENSCLMG00005008196) ENSCLMG00005008198 cyp2p6 (ENSCLMG00005008204) Stickleback MODERN SPECIES 8 borcs8 (ENSGACG00000013097) rfxank (ENSGACG00000013104) nr2c2ap (ENSGACG00000013111) NCAN (ENSGACG00000013123) hapln4 (ENSGACG00000013146) tm6sf2b (ENSGACG00000013151) SBNO2 (ENSGACG00000013190) tjp3 (ENSGACG00000013208) ARHGAP45 (ENSGACG00000013232) ENSGACG00000013244 POLR2E (ENSGACG00000013247) ENSGACG00000013266 ENSGACG00000013270 ENSGACG00000013272 PIP5K1C (ENSGACG00000013288) ENSGACG00000013297 #22 marchf2 (ENSGACG00000013320) #23 ELAVL1 (ENSGACG00000013329) stx6 (ENSGACG00000013339) ENSGACG00000013348 wdr18 (ENSGACG00000013349) GRIN3B (ENSGACG00000013373) TMEM259 (ENSGACG00000013380) med16 (ENSGACG00000013385) PLPPR3 (ENSGACG00000013397) ENSGACG00000013404 ENSGACG00000013406 palm1a (ENSGACG00000013409) ENSGACG00000013421 trmt13 (ENSGACG00000013428) lrrc39 (ENSGACG00000013444) Perciformes_a ANCESTRAL SPECIES ENSGT00940000163126.a.b.g.b #22 Pike perch MODERN SPECIES 34 tmem161a (ENSSLUG00000014746) mef2b (ENSSLUG00000014774) ENSSLUG00000014781 borcs8 (ENSSLUG00000014783) rfxank (ENSSLUG00000014793) nr2c2ap (ENSSLUG00000014797) NCAN (ENSSLUG00000014815) hapln4 (ENSSLUG00000014874) tm6sf2b (ENSSLUG00000014884) SBNO2 (ENSSLUG00000014942) tjp3 (ENSSLUG00000015106) ARHGAP45 (ENSSLUG00000015210) POLR2E (ENSSLUG00000015773) gpx4b (ENSSLUG00000001474) PIP5K1C (ENSSLUG00000001546) ENSSLUG00000001628 #22 marchf2 (ENSSLUG00000001696) #23 ENSSLUG00000001708 #22 stap2b (ENSSLUG00000001757) fsd1 (ENSSLUG00000001801) si:ch211-129c21.1 (ENSSLUG00000001831) scamp4 (ENSSLUG00000001841) chaf1a (ENSSLUG00000001864) ubxn6 (ENSSLUG00000001897) uap1 (ENSSLUG00000001973) DDR2 (ENSSLUG00000002178) hsd17b7 (ENSSLUG00000002265) serbp1a (ENSSLUG00000002274) il12rb2 (ENSSLUG00000002283) il23r (ENSSLUG00000002297) cyp2p6 (ENSSLUG00000002333) Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b Large yellow croaker MODERN SPECIES 489 ENSLCRG00005013820 borcs8 (ENSLCRG00005013819) rfxank (ENSLCRG00005013817) ENSLCRG00005013816 nr2c2ap (ENSLCRG00005013815) NCAN (ENSLCRG00005013811) hapln4 (ENSLCRG00005013806) tm6sf2b (ENSLCRG00005013801) SBNO2 (ENSLCRG00005013651) tjp3 (ENSLCRG00005013525) ARHGAP45 (ENSLCRG00005010869) POLR2E (ENSLCRG00005010845) ENSLCRG00005010838 ENSLCRG00005010836 PIP5K1C (ENSLCRG00005010821) ENSLCRG00005010771 #22 marchf2 (ENSLCRG00005010768) #23 ENSLCRG00005010733 #22 stap2b (ENSLCRG00005010729) fsd1 (ENSLCRG00005010479) si:ch211-129c21.1 (ENSLCRG00005010474) scamp4 (ENSLCRG00005010467) chaf1a (ENSLCRG00005010464) ubxn6 (ENSLCRG00005010461) uap1 (ENSLCRG00005009993) DDR2 (ENSLCRG00005009764) hsd17b7 (ENSLCRG00005009755) serbp1a (ENSLCRG00005009754) il12rb2 (ENSLCRG00005009750) ENSLCRG00005009743 cyp2p6 (ENSLCRG00005009714) Gilthead seabream MODERN SPECIES 2 tmem161a (ENSSAUG00010005475) mef2b (ENSSAUG00010005467) ENSSAUG00010005461 borcs8 (ENSSAUG00010005457) rfxank (ENSSAUG00010005451) nr2c2ap (ENSSAUG00010005447) NCAN (ENSSAUG00010005441) hapln4 (ENSSAUG00010005438) tm6sf2b (ENSSAUG00010005435) SBNO2 (ENSSAUG00010004636) tjp3 (ENSSAUG00010004595) ARHGAP45 (ENSSAUG00010002870) POLR2E (ENSSAUG00010002703) GPX4a (ENSSAUG00010002689) PIP5K1C (ENSSAUG00010002590) ENSSAUG00010002528 #22 marchf2 (ENSSAUG00010002517) #23 ENSSAUG00010002477 #22 stap2b (ENSSAUG00010002471) fsd1 (ENSSAUG00010001434) si:ch211-129c21.1 (ENSSAUG00010001339) scamp4 (ENSSAUG00010001324) chaf1a (ENSSAUG00010001309) ubxn6 (ENSSAUG00010013663) uap1 (ENSSAUG00010013654) DDR2 (ENSSAUG00010013526) hsd17b7 (ENSSAUG00010013522) serbp1a (ENSSAUG00010013520) il12rb2 (ENSSAUG00010013514) ENSSAUG00010013509 ENSSAUG00010013489 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000170739 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b.g.b #22 ENSGT00940000163126.a.b.h #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.a #22 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d Ovalentaria ANCESTRAL SPECIES 9 ENSGT00990000205848 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000170739 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.b.b.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT00950000182879.a.b.b.b.a.a ENSGT00950000182879.a.b.b.b.a.b.a ENSGT00950000182879.a.b.b.a.b.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Poeciliinae ANCESTRAL SPECIES 7 ENSGT00950000182879.a.b.b.b.b.d.a ENSGT00950000182879.a.b.b.b.b.c ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000158992 ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659.l #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Poecilia ANCESTRAL SPECIES 1 ENSGT00950000182879.a.b.b.b.b.d.a ENSGT00950000182879.a.b.b.b.b.c ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000158992 ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659.l #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b.f ENSGT00390000012913.a.b.e ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 NAME_6 ANCESTRAL SPECIES 15 ENSGT00950000182879.a.b.b.b.b.c.a ENSGT00950000182879.a.b.b.b.b.c.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000158992 ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659.l #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b.f Amazon molly MODERN SPECIES 665 il23r (ENSPFOG00000024170) il12rb2 (ENSPFOG00000007735) serbp1a (ENSPFOG00000007643) hsd17b7 (ENSPFOG00000007589) DDR2 (ENSPFOG00000007058) uap1 (ENSPFOG00000024685) ubxn6 (ENSPFOG00000007026) chaf1a (ENSPFOG00000006963) scamp4 (ENSPFOG00000006940) si:ch211-129c21.1 (ENSPFOG00000006680) fsd1 (ENSPFOG00000006360) stap2b (ENSPFOG00000006279) ENSPFOG00000006224 #22 marchf2 (ENSPFOG00000006218) #23 rab11ba (ENSPFOG00000006159) #24 PIP5K1C (ENSPFOG00000005815) ENSPFOG00000005793 POLR2E (ENSPFOG00000005734) ARHGAP45 (ENSPFOG00000005406) tjp3 (ENSPFOG00000004984) SBNO2 (ENSPFOG00000004096) tm6sf2b (ENSPFOG00000004002) Sailfin molly MODERN SPECIES 356 il12rb2 (ENSPLAG00000013899) serbp1a (ENSPLAG00000013912) hsd17b7 (ENSPLAG00000013917) DDR2 (ENSPLAG00000013923) uap1 (ENSPLAG00000013966) ENSPLAG00000013987 ENSPLAG00000013998 ENSPLAG00000014016 ENSPLAG00000014080 ubxn6 (ENSPLAG00000014086) chaf1a (ENSPLAG00000014093) scamp4 (ENSPLAG00000014115) si:ch211-129c21.1 (ENSPLAG00000014124) fsd1 (ENSPLAG00000014175) stap2b (ENSPLAG00000014188) ENSPLAG00000014207 #22 marchf2 (ENSPLAG00000014223) #23 rab11ba (ENSPLAG00000014243) #24 PIP5K1C (ENSPLAG00000014355) gpx4a (ENSPLAG00000014459) POLR2E (ENSPLAG00000014496) ARHGAP45 (ENSPLAG00000014510) tjp3 (ENSPLAG00000014522) SBNO2 (ENSPLAG00000014653) tm6sf2b (ENSPLAG00000014691) Guppy MODERN SPECIES 456 ENSPREG00000005547 ENSPREG00000005561 ENSPREG00000005591 il12rb2 (ENSPREG00000005625) serbp1a (ENSPREG00000005659) hsd17b7 (ENSPREG00000005679) DDR2 (ENSPREG00000005719) uap1 (ENSPREG00000005807) DNAH8 (ENSPREG00000005886) ubxn6 (ENSPREG00000006078) chaf1a (ENSPREG00000006130) scamp4 (ENSPREG00000006161) si:ch211-129c21.1 (ENSPREG00000006188) fsd1 (ENSPREG00000006259) stap2b (ENSPREG00000006310) ENSPREG00000006336 #22 marchf2 (ENSPREG00000006351) #23 rab11ba (ENSPREG00000006357) #24 PIP5K1C (ENSPREG00000006402) GPX4 (ENSPREG00000006468) POLR2E (ENSPREG00000006489) ARHGAP45 (ENSPREG00000006545) tjp3 (ENSPREG00000006711) SBNO2 (ENSPREG00000006755) tm6sf2b (ENSPREG00000006815) ENSPREG00000006870 hapln4 (ENSPREG00000006886) NCAN (ENSPREG00000006902) nr2c2ap (ENSPREG00000006927) rfxank (ENSPREG00000006942) borcs8 (ENSPREG00000006954) Platyfish MODERN SPECIES 23 il12rb2 (ENSXMAG00000011674) serbp1a (ENSXMAG00000011677) hsd17b7 (ENSXMAG00000011686) DDR2 (ENSXMAG00000011693) uap1 (ENSXMAG00000011735) ENSXMAG00000023540 ENSXMAG00000027562 ENSXMAG00000024886 ENSXMAG00000021090 ubxn6 (ENSXMAG00000011842) chaf1a (ENSXMAG00000011864) scamp4 (ENSXMAG00000011870) si:ch211-129c21.1 (ENSXMAG00000011886) fsd1 (ENSXMAG00000011902) stap2b (ENSXMAG00000011916) ENSXMAG00000024840 #22 marchf2 (ENSXMAG00000026178) #23 rab11ba (ENSXMAG00000013416) #24 ENSXMAG00000011962 gpx4a (ENSXMAG00000012006) POLR2E (ENSXMAG00000026495) ARHGAP45 (ENSXMAG00000012031) tjp3 (ENSXMAG00000012059) SBNO2 (ENSXMAG00000012091) tm6sf2b (ENSXMAG00000012128) hapln4 (ENSXMAG00000027383) NCAN (ENSXMAG00000012163) nr2c2ap (ENSXMAG00000012225) rfxank (ENSXMAG00000025235) borcs8 (ENSXMAG00000012261) ENSXMAG00000012262 NAME_4 ANCESTRAL SPECIES 110 ENSGT00950000182879.a.b.b.a.b.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Mummichog MODERN SPECIES 2290 ENSFHEG00000001169 il12rb2 (ENSFHEG00000001163) serbp1a (ENSFHEG00000001151) hsd17b7 (ENSFHEG00000023222) ENSFHEG00000022888 DDR2 (ENSFHEG00000022871) uap1 (ENSFHEG00000022839) ubxn6 (ENSFHEG00000022786) chaf1a (ENSFHEG00000022780) ENSFHEG00000022769 scamp4 (ENSFHEG00000022755) si:ch211-129c21.1 (ENSFHEG00000022731) fsd1 (ENSFHEG00000022728) stap2b (ENSFHEG00000022718) ENSFHEG00000022676 #22 marchf2 (ENSFHEG00000022646) #23 rab11ba (ENSFHEG00000022642) #24 PIP5K1C (ENSFHEG00000022625) gpx4b (ENSFHEG00000022574) POLR2E (ENSFHEG00000022398) ARHGAP45 (ENSFHEG00000022345) tjp3 (ENSFHEG00000022318) SBNO2 (ENSFHEG00000022262) tm6sf2b (ENSFHEG00000022218) hapln4 (ENSFHEG00000022171) NCAN (ENSFHEG00000022147) nr2c2ap (ENSFHEG00000021912) rfxank (ENSFHEG00000021871) borcs8 (ENSFHEG00000021862) ENSFHEG00000021853 Sheepshead minnow MODERN SPECIES 645 ubxn6 (ENSCVAG00000019485) chaf1a (ENSCVAG00000019631) scamp4 (ENSCVAG00000019655) si:ch211-129c21.1 (ENSCVAG00000019671) fsd1 (ENSCVAG00000019699) ENSCVAG00000019709 ENSCVAG00000019718 #22 marchf2 (ENSCVAG00000019726) #23 ENSCVAG00000019751 #22 PIP5K1C (ENSCVAG00000019806) gpx4a (ENSCVAG00000000952) POLR2E (ENSCVAG00000019940) ARHGAP45 (ENSCVAG00000020037) tjp3 (ENSCVAG00000020046) ENSCVAG00000020066 rfc4 (ENSCVAG00000000953) ENSCVAG00000020119 ENSCVAG00000020126 ENSCVAG00000020155 ENSCVAG00000021107 ENSCVAG00000021225 ENSCVAG00000021235 Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Mangrove rivulus MODERN SPECIES 8 ENSKMAG00000007035 ENSKMAG00000006851 ENSKMAG00000006796 il23r (ENSKMAG00000006774) ENSKMAG00000006752 serbp1a (ENSKMAG00000006722) hsd17b7 (ENSKMAG00000006671) DDR2 (ENSKMAG00000006594) uap1 (ENSKMAG00000006502) ubxn6 (ENSKMAG00000006466) chaf1a (ENSKMAG00000006384) scamp4 (ENSKMAG00000006302) si:ch211-129c21.1 (ENSKMAG00000006271) fsd1 (ENSKMAG00000006206) ENSKMAG00000006179 ENSKMAG00000006170 #22 gpx4a (ENSKMAG00000006135) marchf2 (ENSKMAG00000006111) #23 rab11ba (ENSKMAG00000006082) #24 PIP5K1C (ENSKMAG00000005999) POLR2E (ENSKMAG00000005954) ARHGAP45 (ENSKMAG00000005916) tjp3 (ENSKMAG00000005798) SBNO2 (ENSKMAG00000005541) tm6sf2b (ENSKMAG00000005449) hapln4 (ENSKMAG00000005397) NCAN (ENSKMAG00000005371) nr2c2ap (ENSKMAG00000005347) rfxank (ENSKMAG00000005331) borcs8 (ENSKMAG00000005322) ENSKMAG00000005310 Oryzias ANCESTRAL SPECIES 5 ENSGT00950000182879.a.b.b.b.a.d ENSGT00950000182879.a.b.b.b.a.c.b ENSGT00950000182879.a.b.b.b.a.c.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000156577.a ENSGT00440000037733.f ENSGT00940000157247.a.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000156202.a ENSGT00390000016597 ENSGT00940000156311.b.a ENSGT00940000156022.b Oryzias_b ANCESTRAL SPECIES 26 ENSGT00950000182879.a.b.b.b.a.d ENSGT00950000182879.a.b.b.b.a.c.b ENSGT00950000182879.a.b.b.b.a.c.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000156577.a ENSGT00440000037733.f ENSGT00940000157247.a.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000156202.a ENSGT00390000016597 ENSGT00940000156311.b.a ENSGT00940000156022.b Javanese ricefish MODERN SPECIES 18 cyp2ad2 (ENSOJAG00000009343) ENSOJAG00000009413 ENSOJAG00000009646 ENSOJAG00000009859 il12rb2 (ENSOJAG00000009941) serbp1a (ENSOJAG00000009965) hsd17b7 (ENSOJAG00000009979) DDR2 (ENSOJAG00000010035) uap1 (ENSOJAG00000010356) ubxn6 (ENSOJAG00000010684) chaf1a (ENSOJAG00000010834) scamp4 (ENSOJAG00000011088) si:ch211-129c21.1 (ENSOJAG00000011106) fsd1 (ENSOJAG00000011289) ENSOJAG00000011563 ENSOJAG00000011571 #22 marchf2 (ENSOJAG00000011638) #23 ENSOJAG00000011713 #22 PIP5K1C (ENSOJAG00000011858) ENSOJAG00000012200 POLR2E (ENSOJAG00000012258) ARHGAP45 (ENSOJAG00000012312) tjp3 (ENSOJAG00000000075) amotl2a (ENSOJAG00000000111) sap130a (ENSOJAG00000000219) GPR17 (ENSOJAG00000000598) INPP5D (ENSOJAG00000000617) smx5 (ENSOJAG00000000656) bcl6aa (ENSOJAG00000000663) lpp (ENSOJAG00000000677) tprg1 (ENSOJAG00000000690) Indian medaka MODERN SPECIES 13 ENSOMEG00000002282 ENSOMEG00000002301 ENSOMEG00000002314 ENSOMEG00000002325 il12rb2 (ENSOMEG00000002340) serbp1a (ENSOMEG00000002349) hsd17b7 (ENSOMEG00000002364) DDR2 (ENSOMEG00000002398) uap1 (ENSOMEG00000000042) ubxn6 (ENSOMEG00000002453) chaf1a (ENSOMEG00000002469) scamp4 (ENSOMEG00000002484) si:ch211-129c21.1 (ENSOMEG00000002494) fsd1 (ENSOMEG00000002522) ENSOMEG00000002541 ENSOMEG00000002562 #22 marchf2 (ENSOMEG00000002567) #23 rab11ba (ENSOMEG00000002581) #24 PIP5K1C (ENSOMEG00000002623) ENSOMEG00000002677 POLR2E (ENSOMEG00000002709) ARHGAP45 (ENSOMEG00000002732) tjp3 (ENSOMEG00000000054) ENSOMEG00000002768 amotl2a (ENSOMEG00000002779) sap130a (ENSOMEG00000002807) ENSOMEG00000002849 GPR17 (ENSOMEG00000000061) INPP5D (ENSOMEG00000002876) smx5 (ENSOMEG00000002892) bcl6aa (ENSOMEG00000002918) Oryzias_a ANCESTRAL SPECIES 24 ENSGT00950000182879.a.b.b.b.a.d ENSGT00950000182879.a.b.b.b.a.c.b ENSGT00950000182879.a.b.b.b.a.c.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000156577.a ENSGT00440000037733.f ENSGT00940000157247.a.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000156202.a ENSGT00390000016597 ENSGT00940000156311.b.a ENSGT00940000156022.b Chinese medaka MODERN SPECIES 95 cyp2n13 (ENSOSIG00000000503) cyp2p6 (ENSOSIG00000000158) cyp2ad3 (ENSOSIG00000018672) ENSOSIG00000018667 il12rb2 (ENSOSIG00000018664) serbp1a (ENSOSIG00000018661) hsd17b7 (ENSOSIG00000018658) DDR2 (ENSOSIG00000018474) uap1 (ENSOSIG00000018439) ubxn6 (ENSOSIG00000018409) chaf1a (ENSOSIG00000018315) scamp4 (ENSOSIG00000018305) si:ch211-129c21.1 (ENSOSIG00000018282) fsd1 (ENSOSIG00000018201) ENSOSIG00000018188 ENSOSIG00000018181 #22 marchf2 (ENSOSIG00000018172) #23 rab11ba (ENSOSIG00000018167) #24 ARHGAP45 (ENSOSIG00000017940) tjp3 (ENSOSIG00000017907) amotl2a (ENSOSIG00000017883) sap130a (ENSOSIG00000017881) GPR17 (ENSOSIG00000017791) ENSOSIG00000017072 lpp (ENSOSIG00000017031) tprg1 (ENSOSIG00000017027) tp63 (ENSOSIG00000016987) zbtb11 (ENSOSIG00000016977) dpt (ENSOSIG00000016976) ATP1B1 (ENSOSIG00000016974) ENSOSIG00000016971 Japanese Medaka HdrR MODERN SPECIES 18 ENSORLG00000028232 ENSORLG00000014936 cyp2p3 (ENSORLG00000015011) ENSORLG00000027349 il12rb2 (ENSORLG00000015026) serbp1a (ENSORLG00000015043) hsd17b7 (ENSORLG00000015071) DDR2 (ENSORLG00000015116) uap1 (ENSORLG00000015154) ubxn6 (ENSORLG00000015178) chaf1a (ENSORLG00000015193) scamp4 (ENSORLG00000029740) si:ch211-129c21.1 (ENSORLG00000015228) fsd1 (ENSORLG00000015253) ENSORLG00000026413 ENSORLG00000015284 #22 marchf2 (ENSORLG00000015303) #23 rab11ba (ENSORLG00000015307) #24 PIP5K1C (ENSORLG00000015327) ENSORLG00000015339 POLR2E (ENSORLG00000015346) ARHGAP45 (ENSORLG00000015393) tjp3 (ENSORLG00000015436) amotl2a (ENSORLG00000015457) sap130a (ENSORLG00000015499) ENSORLG00000015554 GPR17 (ENSORLG00000015572) INPP5D (ENSORLG00000015584) smx5 (ENSORLG00000029858) bcl6aa (ENSORLG00000015589) lpp (ENSORLG00000015602) Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00990000205848 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Pomacentridae ANCESTRAL SPECIES 14 ENSGT00990000205848 ENSGT00950000182879.a.b.a.a.b.b.b.b.f ENSGT00950000182879.a.b.b.a.b.a.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Pomacentridae_A ANCESTRAL SPECIES ENSGT00990000205848 ENSGT00950000182879.a.b.a.a.b.b.b.b.f ENSGT00950000182879.a.b.b.a.b.a.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Amphiprion ANCESTRAL SPECIES 2 ENSGT00950000182879.a.b.b.a.b.a.a.a.a.b ENSGT00990000205848 ENSGT00950000182879.a.b.b.a.b.a.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Clown anemonefish MODERN SPECIES 3210 uap1 (ENSAOCG00000019166) ubxn6 (ENSAOCG00000019099) chaf1a (ENSAOCG00000019078) scamp4 (ENSAOCG00000001955) si:ch211-129c21.1 (ENSAOCG00000019021) fsd1 (ENSAOCG00000018979) ENSAOCG00000018867 ENSAOCG00000018849 #22 Orange clownfish MODERN SPECIES 11 ENSAPEG00000009862 ENSAPEG00000009852 ENSAPEG00000009836 ENSAPEG00000009715 il12rb2 (ENSAPEG00000009692) serbp1a (ENSAPEG00000009604) hsd17b7 (ENSAPEG00000009585) DDR2 (ENSAPEG00000009522) uap1 (ENSAPEG00000009472) ubxn6 (ENSAPEG00000009347) chaf1a (ENSAPEG00000009323) scamp4 (ENSAPEG00000009291) si:ch211-129c21.1 (ENSAPEG00000009283) fsd1 (ENSAPEG00000009273) ENSAPEG00000009260 ENSAPEG00000009245 #22 ENSAPEG00000009227 #24 marchf2 (ENSAPEG00000009205) #23 rab11ba (ENSAPEG00000009177) #24 PIP5K1C (ENSAPEG00000009071) ENSAPEG00000009041 POLR2E (ENSAPEG00000009000) ARHGAP45 (ENSAPEG00000008981) tjp3 (ENSAPEG00000008924) SBNO2 (ENSAPEG00000008862) tm6sf2b (ENSAPEG00000008818) hapln4 (ENSAPEG00000008754) ENSAPEG00000008703 ENSAPEG00000008664 ENSAPEG00000008642 nr2c2ap (ENSAPEG00000008619) Bicolor damselfish MODERN SPECIES 1474 ENSSPAG00000013986 ENSSPAG00000013993 il12rb2 (ENSSPAG00000014022) serbp1a (ENSSPAG00000014054) hsd17b7 (ENSSPAG00000014092) DDR2 (ENSSPAG00000014147) uap1 (ENSSPAG00000014217) ubxn6 (ENSSPAG00000014276) chaf1a (ENSSPAG00000014297) scamp4 (ENSSPAG00000014378) si:ch211-129c21.1 (ENSSPAG00000014409) fsd1 (ENSSPAG00000014443) ENSSPAG00000014542 ENSSPAG00000014559 #22 Cichlidae ANCESTRAL SPECIES 17 ENSGT00990000205848 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Pseudocrenilabrinae ANCESTRAL SPECIES 10 ENSGT00990000205848 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Pseudocrenilabrinae_A ANCESTRAL SPECIES 26 ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Haplochromini ANCESTRAL SPECIES 16 ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Burton s mouthbrooder MODERN SPECIES 853 ENSHBUG00000011132 ENSHBUG00000011109 ENSHBUG00000011040 ENSHBUG00000000274 il12rb2 (ENSHBUG00000010334) serbp1a (ENSHBUG00000010298) hsd17b7 (ENSHBUG00000010261) DDR2 (ENSHBUG00000010237) uap1 (ENSHBUG00000010126) ubxn6 (ENSHBUG00000010046) chaf1a (ENSHBUG00000010031) scamp4 (ENSHBUG00000000931) si:ch211-129c21.1 (ENSHBUG00000009979) fsd1 (ENSHBUG00000009969) stap2b (ENSHBUG00000009959) ENSHBUG00000009947 #22 marchf2 (ENSHBUG00000009928) #23 rab11ba (ENSHBUG00000009894) #24 PIP5K1C (ENSHBUG00000009866) gpx4a (ENSHBUG00000009822) Haplochromini_A ANCESTRAL SPECIES 15 ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 P. nyererei MODERN SPECIES 351 ENSPNYG00000017505 ENSPNYG00000018095 ENSPNYG00000018704 ENSPNYG00000019186 il12rb2 (ENSPNYG00000019216) serbp1a (ENSPNYG00000019256) hsd17b7 (ENSPNYG00000019301) DDR2 (ENSPNYG00000019333) uap1 (ENSPNYG00000019385) ubxn6 (ENSPNYG00000019420) chaf1a (ENSPNYG00000019436) scamp4 (ENSPNYG00000019469) si:ch211-129c21.1 (ENSPNYG00000019488) fsd1 (ENSPNYG00000019516) stap2b (ENSPNYG00000019588) ENSPNYG00000019611 #22 marchf2 (ENSPNYG00000019636) #23 rab11ba (ENSPNYG00000019644) #24 PIP5K1C (ENSPNYG00000019686) ENSPNYG00000019769 POLR2E (ENSPNYG00000019797) ARHGAP45 (ENSPNYG00000019821) tjp3 (ENSPNYG00000019859) SBNO2 (ENSPNYG00000019926) tm6sf2b (ENSPNYG00000020025) hapln4 (ENSPNYG00000020059) ENSPNYG00000020076 ENSPNYG00000020100 nr2c2ap (ENSPNYG00000020115) rfxank (ENSPNYG00000020138) borcs8 (ENSPNYG00000020144) Haplochromini_B ANCESTRAL SPECIES 10 ENSGT00950000182879.a.b.b.a.b.a.c.a.c.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b.b.a.a ENSGT00940000159829.d ENSGT00940000155776.a.e ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Eastern happy MODERN SPECIES 14 ENSACLG00000007732 ENSACLG00000006607 ENSACLG00000005946 ENSACLG00000005910 il12rb2 (ENSACLG00000005783) serbp1a (ENSACLG00000005768) hsd17b7 (ENSACLG00000005757) DDR2 (ENSACLG00000005714) uap1 (ENSACLG00000005663) ubxn6 (ENSACLG00000005647) chaf1a (ENSACLG00000005630) scamp4 (ENSACLG00000005608) si:ch211-129c21.1 (ENSACLG00000005577) fsd1 (ENSACLG00000005484) stap2b (ENSACLG00000005464) ENSACLG00000005446 #22 marchf2 (ENSACLG00000005438) #23 rab11ba (ENSACLG00000005420) #24 PIP5K1C (ENSACLG00000005378) gpx4a (ENSACLG00000005282) POLR2E (ENSACLG00000005254) ARHGAP45 (ENSACLG00000005229) ENSACLG00000005193 SBNO2 (ENSACLG00000005090) tm6sf2b (ENSACLG00000005059) hapln4 (ENSACLG00000005043) NCAN (ENSACLG00000005023) nr2c2ap (ENSACLG00000004835) rfxank (ENSACLG00000004808) borcs8 (ENSACLG00000004781) ENSACLG00000004801 Zebra mbuna MODERN SPECIES 1105 ENSMZEG00005016339 ENSMZEG00005016289 ENSMZEG00005011775 ENSMZEG00005011689 il12rb2 (ENSMZEG00005011617) serbp1a (ENSMZEG00005011260) hsd17b7 (ENSMZEG00005011230) DDR2 (ENSMZEG00005011178) uap1 (ENSMZEG00005011153) ubxn6 (ENSMZEG00005011141) chaf1a (ENSMZEG00005011071) scamp4 (ENSMZEG00005011050) si:ch211-129c21.1 (ENSMZEG00005011031) fsd1 (ENSMZEG00005011009) stap2b (ENSMZEG00005010987) ENSMZEG00005010975 #22 marchf2 (ENSMZEG00005010963) #23 rab11ba (ENSMZEG00005010947) #24 PIP5K1C (ENSMZEG00005010892) gpx4a (ENSMZEG00005010823) POLR2E (ENSMZEG00005010796) ARHGAP45 (ENSMZEG00005010755) ENSMZEG00005010715 SBNO2 (ENSMZEG00005010682) tm6sf2b (ENSMZEG00005010599) hapln4 (ENSMZEG00005010581) ENSMZEG00005010568 ENSMZEG00005010552 nr2c2ap (ENSMZEG00005010533) rfxank (ENSMZEG00005010523) borcs8 (ENSMZEG00005010515) Lyretail cichlid MODERN SPECIES 584 ENSNBRG00000023633 ENSNBRG00000023700 ENSNBRG00000023756 il12rb2 (ENSNBRG00000023770) serbp1a (ENSNBRG00000023789) hsd17b7 (ENSNBRG00000023795) DDR2 (ENSNBRG00000023800) uap1 (ENSNBRG00000023806) ubxn6 (ENSNBRG00000023812) chaf1a (ENSNBRG00000023818) scamp4 (ENSNBRG00000023826) si:ch211-129c21.1 (ENSNBRG00000023832) fsd1 (ENSNBRG00000023844) stap2b (ENSNBRG00000023872) ENSNBRG00000023885 #22 marchf2 (ENSNBRG00000023894) #23 rab11ba (ENSNBRG00000023898) #24 PIP5K1C (ENSNBRG00000023905) ENSNBRG00000023910 Nile tilapia MODERN SPECIES 14 ENSONIG00000035577 ENSONIG00000030382 ENSONIG00000039651 ENSONIG00000042731 il12rb2 (ENSONIG00000002601) serbp1a (ENSONIG00000002600) hsd17b7 (ENSONIG00000002597) DDR2 (ENSONIG00000002591) uap1 (ENSONIG00000002583) ubxn6 (ENSONIG00000042864) chaf1a (ENSONIG00000002573) scamp4 (ENSONIG00000002570) si:ch211-129c21.1 (ENSONIG00000002563) fsd1 (ENSONIG00000002556) stap2b (ENSONIG00000002548) ENSONIG00000002544 #22 march2 (ENSONIG00000033383) #23 rab11ba (ENSONIG00000028579) #24 PIP5K1C (ENSONIG00000002529) ENSONIG00000010276 POLR2E (ENSONIG00000002519) ARHGAP45 (ENSONIG00000002512) tjp3 (ENSONIG00000002505) SBNO2 (ENSONIG00000002490) ENSONIG00000034433 ##20 tm6sf2b (ENSONIG00000002484) hapln4 (ENSONIG00000002482) NCAN (ENSONIG00000042723) rfxank (ENSONIG00000002470) nr2c2ap (ENSONIG00000038128) borcs8 (ENSONIG00000042174) Midas cichlid MODERN SPECIES 505 ENSACIG00000024389 ENSACIG00000024388 il12rb2 (ENSACIG00000024387) serbp1a (ENSACIG00000024386) hsd17b7 (ENSACIG00000024385) DDR2 (ENSACIG00000024384) uap1 (ENSACIG00000024383) ubxn6 (ENSACIG00000024382) chaf1a (ENSACIG00000024381) scamp4 (ENSACIG00000024380) si:ch211-129c21.1 (ENSACIG00000024379) fsd1 (ENSACIG00000024378) stap2b (ENSACIG00000024377) ENSACIG00000024376 #22 marchf2 (ENSACIG00000024375) #23 rab11ba (ENSACIG00000024374) #24 PIP5K1C (ENSACIG00000024373) gpx4a (ENSACIG00000024372) POLR2E (ENSACIG00000024371) ARHGAP45 (ENSACIG00000024370) ENSACIG00000024369 SBNO2 (ENSACIG00000024368) tm6sf2b (ENSACIG00000024367) hapln4 (ENSACIG00000024366) ENSACIG00000024365 ENSACIG00000024364 nr2c2ap (ENSACIG00000024363) rfxank (ENSACIG00000024362) borcs8 (ENSACIG00000024361) Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000163126.a.b.h #22 Carangaria ANCESTRAL SPECIES ENSGT00940000163126.a.b.h #22 Pleuronectoidei ANCESTRAL SPECIES 29 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 Tongue sole MODERN SPECIES 11 zyg11 (ENSCSEG00000007515) echdc2 (ENSCSEG00000007501) ENSCSEG00000007493 faslg (ENSCSEG00000007485) ENSCSEG00000007482 serbp1a (ENSCSEG00000007473) hsd17b7 (ENSCSEG00000007452) DDR2 (ENSCSEG00000007389) uap1 (ENSCSEG00000007365) ubxn6 (ENSCSEG00000007338) chaf1a (ENSCSEG00000007318) scamp4 (ENSCSEG00000007313) si:ch211-129c21.1 (ENSCSEG00000007288) fsd1 (ENSCSEG00000007260) ENSCSEG00000007249 ENSCSEG00000007239 #22 PIP5K1C (ENSCSEG00000007222) gpx4a (ENSCSEG00000007167) marchf2 (ENSCSEG00000007136) #23 rab11ba (ENSCSEG00000007121) #24 POLR2E (ENSCSEG00000007107) ARHGAP45 (ENSCSEG00000007060) tjp3 (ENSCSEG00000006942) SBNO2 (ENSCSEG00000006856) hapln4 (ENSCSEG00000006835) NCAN (ENSCSEG00000006782) nr2c2ap (ENSCSEG00000006765) rfxank (ENSCSEG00000006758) ENSCSEG00000006752 borcs8 (ENSCSEG00000006744) ENSCSEG00000005870 Eupercaria ANCESTRAL SPECIES 8 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00390000012913.a.b ENSGT00940000159946 ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913.b ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00530000063841.b.a ENSGT00940000159440 ENSGT00940000165728.c ENSGT00940000166572 ENSGT00440000034888 ENSGT00940000157273 ENSGT00940000160836.d.b.b ENSGT00940000153464.A.b ENSGT00940000154842.a.b.e ENSGT00390000013340.d ENSGT00520000055591.a.a ENSGT00940000155776.a ENSGT00940000159829.d ENSGT00950000182879.a.b.b.a.b Fugu DUPLICATION Fugu MODERN SPECIES 12 cyp2p6 (ENSTRUG00000018373) ENSTRUG00000018372 ENSTRUG00000030488 serbp1a (ENSTRUG00000018368) hsd17b7 (ENSTRUG00000018364) DDR2 (ENSTRUG00000018340) uap1 (ENSTRUG00000018335) fmo (ENSTRUG00000018321) ubxn6 (ENSTRUG00000018309) chaf1a (ENSTRUG00000018302) scamp4 (ENSTRUG00000018301) si:ch211-129c21.1 (ENSTRUG00000025380) ENSTRUG00000025996 fsd1 (ENSTRUG00000018292) stap2b (ENSTRUG00000018287) ENSTRUG00000021614 #22 marchf2 (ENSTRUG00000030753) #23 ENSTRUG00000022029 #22 PIP5K1C (ENSTRUG00000018248) gpx4b (ENSTRUG00000018245) POLR2E (ENSTRUG00000018238) ARHGAP45 (ENSTRUG00000018228) tjp3 (ENSTRUG00000018210) SBNO2 (ENSTRUG00000018193) tm6sf2b (ENSTRUG00000018186) NCAN (ENSTRUG00000018168) ENSTRUG00000021338 nr2c2ap (ENSTRUG00000024033) rfxank (ENSTRUG00000018160) borcs8 (ENSTRUG00000020808) ENSTRUG00000020493 Fugu MODERN SPECIES 12 tmem161a (ENSTRUG00000018141) mef2b (ENSTRUG00000018156) ENSTRUG00000020493 borcs8 (ENSTRUG00000020808) rfxank (ENSTRUG00000018160) nr2c2ap (ENSTRUG00000024033) ENSTRUG00000021338 NCAN (ENSTRUG00000018168) tm6sf2b (ENSTRUG00000018186) SBNO2 (ENSTRUG00000018193) tjp3 (ENSTRUG00000018210) ARHGAP45 (ENSTRUG00000018228) POLR2E (ENSTRUG00000018238) gpx4b (ENSTRUG00000018245) PIP5K1C (ENSTRUG00000018248) ENSTRUG00000022029 #22 marchf2 (ENSTRUG00000030753) #23 ENSTRUG00000021614 #22 stap2b (ENSTRUG00000018287) fsd1 (ENSTRUG00000018292) ENSTRUG00000025996 si:ch211-129c21.1 (ENSTRUG00000025380) scamp4 (ENSTRUG00000018301) chaf1a (ENSTRUG00000018302) ubxn6 (ENSTRUG00000018309) fmo (ENSTRUG00000018321) uap1 (ENSTRUG00000018335) DDR2 (ENSTRUG00000018340) hsd17b7 (ENSTRUG00000018364) serbp1a (ENSTRUG00000018368) ENSTRUG00000030488 Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 sgf29 (ENSTNIG00000006496) asb4 (ENSTNIG00000001985) ENSTNIG00000001986 NOX5 (ENSTNIG00000001987) ENSTNIG00000001988 ENSTNIG00000001990 zgc:113232 (ENSTNIG00000001992) ENSTNIG00000000910 ENSTNIG00000001993 ndrg2 (ENSTNIG00000001995) ENSTNIG00000001998 ENSTNIG00000001999 ATP6V1B1 (ENSTNIG00000002000) ENSTNIG00000002001 ENSTNIG00000001328 ENSTNIG00000002003 #22 ACTN1 (ENSTNIG00000002006) ENSTNIG00000000902 UPP1 (ENSTNIG00000001379) C11orf98 (ENSTNIG00000002007) atg14 (ENSTNIG00000002008) psmc6 (ENSTNIG00000002009) ENSTNIG00000002010 ENSTNIG00000002011 ENSTNIG00000002012 GID4 (ENSTNIG00000002013) ENSTNIG00000001371 klhl36 (ENSTNIG00000002014) TFAP4 (ENSTNIG00000002015) gna13a (ENSTNIG00000002016) ENSTNIG00000002017 Tetraodon MODERN SPECIES ENSTNIG00000001576 ENSTNIG00000000727 ENSTNIG00000001804 il12rb2 (ENSTNIG00000001805) serbp1a (ENSTNIG00000013171) hsd17b7 (ENSTNIG00000013172) DDR2 (ENSTNIG00000013173) uap1 (ENSTNIG00000013174) ENSTNIG00000013175 ubxn6 (ENSTNIG00000013176) chaf1a (ENSTNIG00000013177) scamp4 (ENSTNIG00000013178) si:ch211-129c21.1 (ENSTNIG00000013179) fsd1 (ENSTNIG00000013180) ENSTNIG00000013181 ENSTNIG00000013182 #22 marchf2 (ENSTNIG00000013183) #23 ENSTNIG00000013184 #22 PIP5K1C (ENSTNIG00000013185) ENSTNIG00000013186 POLR2E (ENSTNIG00000013187) ARHGAP45 (ENSTNIG00000013188) tjp3 (ENSTNIG00000013189) ENSTNIG00000013190 SBNO2 (ENSTNIG00000000856) tm6sf2b (ENSTNIG00000013191) NCAN (ENSTNIG00000013192) nr2c2ap (ENSTNIG00000013193) rfxank (ENSTNIG00000013194) borcs8 (ENSTNIG00000013195) ENSTNIG00000001114 Tetraodon MODERN SPECIES tmem161a (ENSTNIG00000013197) mef2b (ENSTNIG00000013196) ENSTNIG00000001114 borcs8 (ENSTNIG00000013195) rfxank (ENSTNIG00000013194) nr2c2ap (ENSTNIG00000013193) NCAN (ENSTNIG00000013192) tm6sf2b (ENSTNIG00000013191) SBNO2 (ENSTNIG00000000856) ENSTNIG00000013190 tjp3 (ENSTNIG00000013189) ARHGAP45 (ENSTNIG00000013188) POLR2E (ENSTNIG00000013187) ENSTNIG00000013186 PIP5K1C (ENSTNIG00000013185) ENSTNIG00000013184 #22 marchf2 (ENSTNIG00000013183) #23 ENSTNIG00000013182 #22 ENSTNIG00000013181 fsd1 (ENSTNIG00000013180) si:ch211-129c21.1 (ENSTNIG00000013179) scamp4 (ENSTNIG00000013178) chaf1a (ENSTNIG00000013177) ubxn6 (ENSTNIG00000013176) ENSTNIG00000013175 uap1 (ENSTNIG00000013174) DDR2 (ENSTNIG00000013173) hsd17b7 (ENSTNIG00000013172) serbp1a (ENSTNIG00000013171) il12rb2 (ENSTNIG00000001805) ENSTNIG00000001804 Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.b.a ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000163126.a.b.h #22 Perciformes ANCESTRAL SPECIES 8 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000163126.a.b.g.a #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00940000161913.b ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 Cottioidei ANCESTRAL SPECIES 5 ENSGT00950000182879.a.b.a.a.b.a.g.b ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00950000182879.a.b.b.a.b ENSGT00940000159829.d ENSGT00940000155776.a ENSGT00520000055591.a.a ENSGT00390000013340.d ENSGT00940000154842.a.b.e ENSGT00940000153464.A.b ENSGT00940000157273 ENSGT00440000034888 ENSGT00940000166572 ENSGT00940000165728.c ENSGT00940000159440 ENSGT00530000063841.b.a ENSGT00940000163126.a.b.h #22 ENSGT00940000158995.a #23 ENSGT00940000163126.a.b.g.b #22 ENSGT00940000159258.d ENSGT00940000165680.A ENSGT00390000013841 ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199 Lumpfish MODERN SPECIES 19 cyp2n13 (ENSCLMG00005008735) cyp2ad2 (ENSCLMG00005008459) cyp2p6 (ENSCLMG00005008204) ENSCLMG00005008198 il12rb2 (ENSCLMG00005008196) serbp1a (ENSCLMG00005008195) hsd17b7 (ENSCLMG00005008184) DDR2 (ENSCLMG00005007715) uap1 (ENSCLMG00005007686) ubxn6 (ENSCLMG00005007308) chaf1a (ENSCLMG00005007194) scamp4 (ENSCLMG00005007191) si:ch211-129c21.1 (ENSCLMG00005007188) fsd1 (ENSCLMG00005007185) stap2b (ENSCLMG00005007183) ENSCLMG00005007180 #22 marchf2 (ENSCLMG00005007179) #23 ENSCLMG00005007178 #22 PIP5K1C (ENSCLMG00005007030) ENSCLMG00005007028 POLR2E (ENSCLMG00005007020) ARHGAP45 (ENSCLMG00005001826) tjp3 (ENSCLMG00005001533) SBNO2 (ENSCLMG00005000780) tm6sf2b (ENSCLMG00005000771) hapln4 (ENSCLMG00005000769) ENSCLMG00005000768 NCAN (ENSCLMG00005000748) SLC25A42 (ENSCLMG00005000576) MAU2 (ENSCLMG00005000533) gatad2ab (ENSCLMG00005000526) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 497 ENSLBEG00000004212 ENSLBEG00000004771 ENSLBEG00000005207 ENSLBEG00000005222 il12rb2 (ENSLBEG00000005259) serbp1a (ENSLBEG00000005289) hsd17b7 (ENSLBEG00000005341) DDR2 (ENSLBEG00000005422) uap1 (ENSLBEG00000005520) ubxn6 (ENSLBEG00000005614) chaf1a (ENSLBEG00000005685) scamp4 (ENSLBEG00000005803) si:ch211-129c21.1 (ENSLBEG00000005828) fsd1 (ENSLBEG00000005871) ENSLBEG00000005932 ENSLBEG00000005981 #22 marchf2 (ENSLBEG00000006033) #23 rab11ba (ENSLBEG00000006087) #24 Ballan wrasse MODERN SPECIES 2398 ENSLBEG00000004172 #22 marchf2 (ENSLBEG00000004196) #23 Protacanthopterygii ANCESTRAL SPECIES 13 ENSGT00390000005338 ENSGT00940000158588 #32 ENSGT00950000182993.A.a.i #27 ENSGT00390000012434 #29 ENSGT00390000007212 #30 ENSGT00940000165636.d ENSGT00390000014000 ENSGT01030000235960 ENSGT00940000159993 ENSGT00940000163715.b ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A ENSGT00940000154412.C.d ENSGT00390000000051.a ENSGT00940000154595 ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000161659 #24 ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000161913.b ENSGT00390000013841.db.b ENSGT00950000183110.b.a.c ENSGT00940000160036 ENSGT00940000159946 ENSGT00390000012913.a.b.c ENSGT00940000160926 ENSGT00940000158649.a.a ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 11 ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b #32 ENSGT00950000182993.A.a.i.c #27 ENSGT00390000012434.a #29 ENSGT00390000007212.d #30 ENSGT00390000014000.c ENSGT00990000208947 ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A.e.a ENSGT00940000154412.C.d.a ENSGT00390000000051.a.b ENSGT00940000154595.ib ENSGT00940000163126.a.b.i.a #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.b #22 ENSGT00940000159258.d.d ENSGT00940000170739 ENSGT00980000198641 ENSGT00390000013841.db.b.a ENSGT00950000183110.b.a.c.h ENSGT00940000160036.e ENSGT00940000159946.e ENSGT00390000012913.a.b.c ENSGT00940000160926.d ENSGT00940000158649.a.a.a ENSGT00390000017748.a ENSGT01000000220738 ENSGT00940000165199.d Salmoninae_a ANCESTRAL SPECIES 22 ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b #32 ENSGT00950000182993.A.a.i.c #27 ENSGT00390000012434.a #29 ENSGT00390000007212.d #30 ENSGT00390000014000.c ENSGT00990000208947 ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A.e.a ENSGT00940000154412.C.d.a ENSGT00390000000051.a.b ENSGT00940000154595.ib ENSGT00940000163126.a.b.i.a #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.b #22 ENSGT00940000159258.d.d ENSGT00980000198641 ENSGT00390000013841.db.b.a ENSGT00950000183110.b.a.c.h ENSGT00940000160036.e ENSGT00940000159946.e ENSGT00390000012913.a.b.c ENSGT00940000160926.d ENSGT00940000158649.a.a.a ENSGT00390000017748.a ENSGT01000000220738 ENSGT00940000165199.d ENSGT00940000160699.d Salmo ANCESTRAL SPECIES 14 ENSGT00940000160888.d ENSGT00990000212527 ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b #32 ENSGT00950000182993.A.a.i.c #27 ENSGT00390000012434.a #29 ENSGT00390000007212.d #30 ENSGT00390000014000.c ENSGT00990000208947 ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A.e.a ENSGT00940000154412.C.d.a ENSGT00390000000051.a.b ENSGT00940000154595.ib ENSGT00940000163126.a.b.i.a #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.b #22 ENSGT00940000159258.d.d ENSGT00980000198641 ENSGT00950000183110.b.a.c.h ENSGT00940000160036.e ENSGT00940000159946.e ENSGT00390000012913.a.b.c ENSGT00940000160926.d ENSGT00940000158649.a.a.a ENSGT00390000017748.a ENSGT00940000165199.d ENSGT00940000160699.d ENSGT00390000000672.a.a.c ENSGT00940000158163.a.h Atlantic salmon MODERN SPECIES 1 ccl44 (ENSSSAG00000007216) ENSSSAG00000116706 ENSSSAG00000007224 ENSSSAG00000007228 ctns (ENSSSAG00000007234) ranb3 (ENSSSAG00000007242) #32 ENSSSAG00000071191 #27 nduab (ENSSSAG00000007249) #29 ENSSSAG00000007254 #30 TIM13 (ENSSSAG00000007258) ENSSSAG00000007264 cers4a (ENSSSAG00000007285) fbn2b (ENSSSAG00000007909) timm44 (ENSSSAG00000055890) hnrpm (ENSSSAG00000056055) ENSSSAG00000114371 #22 ENSSSAG00000095065 #23 ENSSSAG00000056122 #22 ENSSSAG00000056411 gpx4a (ENSSSAG00000058124) ENSSSAG00000058332 tjp3 (ENSSSAG00000063260) ENSSSAG00000063326 tm6sf2b (ENSSSAG00000063746) hapln4 (ENSSSAG00000063760) NCAN (ENSSSAG00000063786) ENSSSAG00000097869 nr2c2ap (ENSSSAG00000063826) ENSSSAG00000063836 ENSSSAG00000101688 tmem161a (ENSSSAG00000063857) River trout MODERN SPECIES 14 ccl44 (ENSSTUG00000033916) pole4 (ENSSTUG00000033925) ENSSTUG00000033934 ccl25b (ENSSTUG00000033940) ctns (ENSSTUG00000033944) RANBP3 (ENSSTUG00000034008) #32 ENSSTUG00000034047 #27 ndufa11 (ENSSTUG00000034053) #29 VMAC (ENSSTUG00000034061) #30 timm13 (ENSSTUG00000034066) cers4a (ENSSTUG00000034083) fbn2b (ENSSTUG00000034318) CTXN1 (ENSSTUG00000040963) timm44 (ENSSTUG00000040985) hnrnpm (ENSSTUG00000041137) ENSSTUG00000041378 #22 marchf2 (ENSSTUG00000041424) #23 ENSSTUG00000041457 #22 PIP5K1C (ENSSTUG00000041728) gpx4a (ENSSTUG00000043325) ARHGAP45 (ENSSTUG00000043344) tjp3 (ENSSTUG00000043703) ENSSTUG00000043793 tm6sf2b (ENSSTUG00000044043) hapln4 (ENSSTUG00000044054) ENSSTUG00000044063 ENSSTUG00000044071 nr2c2ap (ENSSTUG00000044080) ENSSTUG00000044103 mef2b (ENSSTUG00000044107) tmem161a (ENSSTUG00000044122) Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000159972.i.b #33 ENSGT01030000235192.d ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00390000005338.a ENSGT00940000158588.d.a.b #32 ENSGT00950000182993.A.a.i.c #27 ENSGT00390000012434.a #29 ENSGT00390000007212.d #30 ENSGT00390000014000.c ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A.e.a ENSGT00940000154412.C.d.a ENSGT00390000000051.a.b ENSGT00940000154595.ib ENSGT00940000163126.a.b.i.a #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.b #22 ENSGT00940000159258.d.d ENSGT00980000198641 ENSGT00390000013841.db.b.a ENSGT00950000183110.b.a.c.h ENSGT00940000160036.e ENSGT00940000159946.e ENSGT00390000012913.a.b.c ENSGT00940000160926.d ENSGT00940000158649.a.a.a ENSGT00390000017748.a ENSGT00940000160753.h ENSGT01000000220738 ENSGT00940000165199.d Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000161678.eb ENSGT00390000002877.g ENSGT00940000159972.i.b #33 ENSGT00940000160888.d ENSGT00900000141362.a.b.b ENSGT00940000158588.d.a.b #32 ENSGT00950000182993.A.a.i.c #27 ENSGT00390000012434.a #29 ENSGT00390000007212.d #30 ENSGT00390000014000.c ENSGT01030000234515.a.b.b.a.c ENSGT00950000183158.A.e.a ENSGT00940000154412.C.d.a ENSGT00390000000051.a.b ENSGT00940000154595.ib ENSGT00940000163126.a.b.i.a #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.b #22 ENSGT00940000159258.d.d ENSGT00940000170739 ENSGT00980000198641 ENSGT00950000183110.b.a.c.h ENSGT00940000160036.e ENSGT00940000159946.e ENSGT00390000012913.a.b.c ENSGT00940000160926.d ENSGT00940000158649.a.a.a ENSGT00390000017748.a ENSGT00940000160753.h ENSGT01000000220738 ENSGT00940000165199.d Coho salmon MODERN SPECIES 4 slc1a6 (ENSOKIG00005015460) #33 pole4 (ENSOKIG00005015425) ccl25b (ENSOKIG00005015413) RANBP3 (ENSOKIG00005015396) #32 ENSOKIG00005015389 #27 ENSOKIG00005015380 ENSOKIG00005015375 ndufa11 (ENSOKIG00005015366) #29 VMAC (ENSOKIG00005015362) #30 TIMM13 (ENSOKIG00005015341) cers4a (ENSOKIG00005015221) fbn2b (ENSOKIG00005007419) CTXN1 (ENSOKIG00005006925) timm44 (ENSOKIG00005006764) HNRNPM (ENSOKIG00005006677) ENSOKIG00005006638 #22 MARCHF2 (ENSOKIG00005006620) #23 ENSOKIG00005006489 #22 PIP5K1C (ENSOKIG00005006405) ENSOKIG00005006382 POLR2E (ENSOKIG00005006325) gpx4a (ENSOKIG00005006312) ARHGAP45 (ENSOKIG00005005934) tjp3 (ENSOKIG00005005822) SBNO2 (ENSOKIG00005005403) tm6sf2b (ENSOKIG00005005345) hapln4 (ENSOKIG00005005332) NCAN (ENSOKIG00005005309) nr2c2ap (ENSOKIG00005005292) ENSOKIG00005005283 ENSOKIG00005005279 Chinook salmon MODERN SPECIES 29 RAB8A (ENSOTSG00005033046) hsh2d (ENSOTSG00005033048) tax1bp3 (ENSOTSG00005033049) slc1a6 (ENSOTSG00005033052) #33 ENSOTSG00005033836 ccl25b (ENSOTSG00005033838) RANBP3 (ENSOTSG00005033844) #32 ENSOTSG00005033847 #27 ndufa11 (ENSOTSG00005033848) #29 VMAC (ENSOTSG00005033849) #30 timm13 (ENSOTSG00005033851) cers4a (ENSOTSG00005033853) fbn2b (ENSOTSG00005033873) timm44 (ENSOTSG00005034744) hnrnpm (ENSOTSG00005034749) ENSOTSG00005034755 #22 marchf2 (ENSOTSG00005034769) #23 ENSOTSG00005034775 #22 PIP5K1C (ENSOTSG00005034853) ENSOTSG00005035328 gpx4a (ENSOTSG00005035330) ENSOTSG00005035332 ENSOTSG00005035333 ARHGAP45 (ENSOTSG00005035344) tjp3 (ENSOTSG00005035701) SBNO2 (ENSOTSG00005035723) tm6sf2b (ENSOTSG00005035943) hapln4 (ENSOTSG00005035946) NCAN (ENSOTSG00005035947) ENSOTSG00005035948 nr2c2ap (ENSOTSG00005035949) Rainbow trout MODERN SPECIES 26 ctns (ENSOMYG00000067836) ENSOMYG00000009517 #32 ENSOMYG00000050465 #27 ENSOMYG00000061253 ndufa11 (ENSOMYG00000009588) #29 ENSOMYG00000009602 #30 ENSOMYG00000009641 ENSOMYG00000061589 cers4a (ENSOMYG00000009657) fbn2b (ENSOMYG00000009828) ENSOMYG00000058318 ENSOMYG00000010059 timm44 (ENSOMYG00000010138) ENSOMYG00000010314 ENSOMYG00000077314 ENSOMYG00000010385 #22 ENSOMYG00000010431 #23 ENSOMYG00000010482 #22 ENSOMYG00000010544 gpx4a (ENSOMYG00000054982) ENSOMYG00000061676 ENSOMYG00000010704 tjp3 (ENSOMYG00000011022) ENSOMYG00000011414 tm6sf2b (ENSOMYG00000015619) hapln4 (ENSOMYG00000015631) NCAN (ENSOMYG00000015644) nr2c2ap (ENSOMYG00000015703) ENSOMYG00000052569 ENSOMYG00000056098 ENSOMYG00000015751 Salmoninae ANCESTRAL SPECIES 11 ENSGT00390000000672.a.a.c ENSGT00940000160699.d ENSGT00940000165199.d ENSGT01000000220738 ENSGT00390000017748.a ENSGT00940000158649.a.a.a ENSGT00940000160926.d ENSGT00390000012913.a.b.c ENSGT00940000159946.e ENSGT00940000160036.e ENSGT00950000183110.b.a.c.h ENSGT00390000013841.db.b.a ENSGT00980000198641 ENSGT00940000170739 ENSGT00940000159258.d.d ENSGT00940000163126.a.b.i.b #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.a #22 ENSGT00940000154595.ib ENSGT00390000000051.a.b ENSGT00940000154412.C.d.a ENSGT00950000183158.A.e.a ENSGT01030000234515.a.b.b.a.c ENSGT00990000208947 ENSGT00390000014000.c ENSGT00390000007212.d #30 ENSGT00390000012434.a #29 ENSGT00950000182993.A.a.i.c #27 ENSGT00940000158588.d.a.b #32 ENSGT00390000005338.a ENSGT00900000141362.a.b.b Huchen DUPLICATION Huchen MODERN SPECIES 2003 PIP5K1C (ENSHHUG00000015373) ENSHHUG00000015493 #22 marchf2 (ENSHHUG00000015665) #23 ENSHHUG00000015674 #22 hnrnpm (ENSHHUG00000015717) timm44 (ENSHHUG00000015778) CTXN1 (ENSHHUG00000015930) fbn2b (ENSHHUG00000015939) Huchen MODERN SPECIES 2003 fbn2b (ENSHHUG00000015939) CTXN1 (ENSHHUG00000015930) timm44 (ENSHHUG00000015778) hnrnpm (ENSHHUG00000015717) ENSHHUG00000015674 #22 marchf2 (ENSHHUG00000015665) #23 ENSHHUG00000015493 #22 PIP5K1C (ENSHHUG00000015373) Salmoninae_a ANCESTRAL SPECIES 22 ENSGT00940000158163.a.h ENSGT00390000000672.a.a.c ENSGT00940000160699.d ENSGT00940000165199.d ENSGT01000000220738 ENSGT00390000017748.a ENSGT00940000158649.a.a.a ENSGT00940000160926.d ENSGT00390000012913.a.b.c ENSGT00940000159946.e ENSGT00940000160036.e ENSGT00950000183110.b.a.c.h ENSGT00390000013841.db.b.a ENSGT00980000198641 ENSGT00940000159258.d.d ENSGT00940000163126.a.b.i.b #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.a #22 ENSGT00940000154595.ib ENSGT00390000000051.a.b ENSGT00940000154412.C.d.a ENSGT00950000183158.A.e.a ENSGT01030000234515.a.b.b.a.c ENSGT00990000208947 ENSGT00390000014000.c ENSGT00390000007212.d #30 ENSGT00390000012434.a #29 ENSGT00950000182993.A.a.i.c #27 ENSGT00940000158588.d.a.b #32 ENSGT00390000005338.a ENSGT00900000141362.a.b.b Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00390000000672.a.a.c ENSGT00940000160699.d ENSGT00940000165199.d ENSGT01000000220738 ENSGT00940000160753.h ENSGT00390000017748.a ENSGT00940000158649.a.a.a ENSGT00940000160926.d ENSGT00390000012913.a.b.c ENSGT00940000159946.e ENSGT00940000160036.e ENSGT00950000183110.b.a.c.h ENSGT00390000013841.db.b.a ENSGT00980000198641 ENSGT00940000159258.d.d ENSGT00940000163126.a.b.i.b #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.a #22 ENSGT00940000154595.ib ENSGT00390000000051.a.b ENSGT00940000154412.C.d.a ENSGT00950000183158.A.e.a ENSGT01030000234515.a.b.b.a.c ENSGT00390000014000.c ENSGT00390000007212.d #30 ENSGT00390000012434.a #29 ENSGT00950000182993.A.a.i.c #27 ENSGT00940000158588.d.a.b #32 ENSGT00390000005338.a ENSGT00900000141362.a.b.b ENSGT00940000160888.d Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00390000000672.a.a.c ENSGT00940000160699.d ENSGT00940000165199.d ENSGT01000000220738 ENSGT00940000160753.h ENSGT00390000017748.a ENSGT00940000158649.a.a.a ENSGT00940000160926.d ENSGT00390000012913.a.b.c ENSGT00940000159946.e ENSGT00940000160036.e ENSGT00950000183110.b.a.c.h ENSGT00980000198641 ENSGT00940000170739 ENSGT00940000159258.d.d ENSGT00940000163126.a.b.i.b #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.a #22 ENSGT00940000154595.ib ENSGT00390000000051.a.b ENSGT00940000154412.C.d.a ENSGT00950000183158.A.e.a ENSGT01030000234515.a.b.b.a.c ENSGT00390000014000.c ENSGT00390000007212.d #30 ENSGT00390000012434.a #29 ENSGT00950000182993.A.a.i.c #27 ENSGT00940000158588.d.a.b #32 ENSGT00900000141362.a.b.b ENSGT00940000160888.d ENSGT00940000159972.i.b #33 Coho salmon MODERN SPECIES 4 tmem161a (ENSOKIG00005004891) mef2b (ENSOKIG00005005266) ENSOKIG00005005279 ENSOKIG00005005283 nr2c2ap (ENSOKIG00005005292) NCAN (ENSOKIG00005005309) hapln4 (ENSOKIG00005005332) tm6sf2b (ENSOKIG00005005345) SBNO2 (ENSOKIG00005005403) tjp3 (ENSOKIG00005005822) ARHGAP45 (ENSOKIG00005005934) gpx4a (ENSOKIG00005006312) POLR2E (ENSOKIG00005006325) ENSOKIG00005006382 PIP5K1C (ENSOKIG00005006405) ENSOKIG00005006489 #22 MARCHF2 (ENSOKIG00005006620) #23 ENSOKIG00005006638 #22 HNRNPM (ENSOKIG00005006677) timm44 (ENSOKIG00005006764) CTXN1 (ENSOKIG00005006925) fbn2b (ENSOKIG00005007419) cers4a (ENSOKIG00005015221) TIMM13 (ENSOKIG00005015341) VMAC (ENSOKIG00005015362) #30 ndufa11 (ENSOKIG00005015366) #29 ENSOKIG00005015375 ENSOKIG00005015380 ENSOKIG00005015389 #27 RANBP3 (ENSOKIG00005015396) #32 ccl25b (ENSOKIG00005015413) Chinook salmon MODERN SPECIES 29 ENSOTSG00005035952 rfxank (ENSOTSG00005035951) nr2c2ap (ENSOTSG00005035949) ENSOTSG00005035948 NCAN (ENSOTSG00005035947) hapln4 (ENSOTSG00005035946) tm6sf2b (ENSOTSG00005035943) SBNO2 (ENSOTSG00005035723) tjp3 (ENSOTSG00005035701) ARHGAP45 (ENSOTSG00005035344) ENSOTSG00005035333 ENSOTSG00005035332 gpx4a (ENSOTSG00005035330) ENSOTSG00005035328 PIP5K1C (ENSOTSG00005034853) ENSOTSG00005034775 #22 marchf2 (ENSOTSG00005034769) #23 ENSOTSG00005034755 #22 hnrnpm (ENSOTSG00005034749) timm44 (ENSOTSG00005034744) fbn2b (ENSOTSG00005033873) cers4a (ENSOTSG00005033853) timm13 (ENSOTSG00005033851) VMAC (ENSOTSG00005033849) #30 ndufa11 (ENSOTSG00005033848) #29 ENSOTSG00005033847 #27 RANBP3 (ENSOTSG00005033844) #32 ccl25b (ENSOTSG00005033838) ENSOTSG00005033836 slc1a6 (ENSOTSG00005033052) #33 tax1bp3 (ENSOTSG00005033049) Rainbow trout MODERN SPECIES 26 ENSOMYG00000015730 ENSOMYG00000059712 ENSOMYG00000015751 ENSOMYG00000056098 ENSOMYG00000052569 nr2c2ap (ENSOMYG00000015703) NCAN (ENSOMYG00000015644) hapln4 (ENSOMYG00000015631) tm6sf2b (ENSOMYG00000015619) ENSOMYG00000011414 tjp3 (ENSOMYG00000011022) ENSOMYG00000010704 ENSOMYG00000061676 gpx4a (ENSOMYG00000054982) ENSOMYG00000010544 ENSOMYG00000010482 #22 ENSOMYG00000010431 #23 ENSOMYG00000010385 #22 ENSOMYG00000077314 ENSOMYG00000010314 timm44 (ENSOMYG00000010138) ENSOMYG00000010059 ENSOMYG00000058318 fbn2b (ENSOMYG00000009828) cers4a (ENSOMYG00000009657) ENSOMYG00000061589 ENSOMYG00000009641 ENSOMYG00000009602 #30 ndufa11 (ENSOMYG00000009588) #29 ENSOMYG00000061253 ENSOMYG00000050465 #27 Salmo ANCESTRAL SPECIES 14 ENSGT00390000004097.a.e.e ENSGT00390000012198.b.b.f ENSGT00940000158163.a.h ENSGT00390000000672.a.a.c ENSGT00940000160699.d ENSGT00940000165199.d ENSGT00390000017748.a ENSGT00940000158649.a.a.a ENSGT00940000160926.d ENSGT00390000012913.a.b.c ENSGT00940000159946.e ENSGT00940000160036.e ENSGT00950000183110.b.a.c.h ENSGT00980000198641 ENSGT00940000159258.d.d ENSGT00940000163126.a.b.i.b #22 ENSGT00940000158995.a.g #23 ENSGT00940000163126.a.b.i.a #22 ENSGT00940000154595.ib ENSGT00390000000051.a.b ENSGT00940000154412.C.d.a ENSGT00950000183158.A.e.a ENSGT01030000234515.a.b.b.a.c ENSGT00990000208947 ENSGT00390000014000.c ENSGT00390000007212.d #30 ENSGT00390000012434.a #29 ENSGT00950000182993.A.a.i.c #27 ENSGT00940000158588.d.a.b #32 ENSGT00390000005338.a ENSGT00900000141362.a.b.b River trout MODERN SPECIES 14 MAU2 (ENSSTUG00000044230) slc25a42 (ENSSTUG00000044216) tmem161a (ENSSTUG00000044122) mef2b (ENSSTUG00000044107) ENSSTUG00000044103 nr2c2ap (ENSSTUG00000044080) ENSSTUG00000044071 ENSSTUG00000044063 hapln4 (ENSSTUG00000044054) tm6sf2b (ENSSTUG00000044043) ENSSTUG00000043793 tjp3 (ENSSTUG00000043703) ARHGAP45 (ENSSTUG00000043344) gpx4a (ENSSTUG00000043325) PIP5K1C (ENSSTUG00000041728) ENSSTUG00000041457 #22 marchf2 (ENSSTUG00000041424) #23 ENSSTUG00000041378 #22 hnrnpm (ENSSTUG00000041137) timm44 (ENSSTUG00000040985) CTXN1 (ENSSTUG00000040963) fbn2b (ENSSTUG00000034318) cers4a (ENSSTUG00000034083) timm13 (ENSSTUG00000034066) VMAC (ENSSTUG00000034061) #30 ndufa11 (ENSSTUG00000034053) #29 ENSSTUG00000034047 #27 RANBP3 (ENSSTUG00000034008) #32 ctns (ENSSTUG00000033944) ccl25b (ENSSTUG00000033940) ENSSTUG00000033934 Atlantic salmon MODERN SPECIES 1 MAU2 (ENSSSAG00000040517) ENSSSAG00000087517 tmem161a (ENSSSAG00000063857) ENSSSAG00000101688 ENSSSAG00000063836 nr2c2ap (ENSSSAG00000063826) ENSSSAG00000097869 NCAN (ENSSSAG00000063786) hapln4 (ENSSSAG00000063760) tm6sf2b (ENSSSAG00000063746) ENSSSAG00000063326 tjp3 (ENSSSAG00000063260) ENSSSAG00000058332 gpx4a (ENSSSAG00000058124) ENSSSAG00000056411 ENSSSAG00000056122 #22 ENSSSAG00000095065 #23 ENSSSAG00000114371 #22 hnrpm (ENSSSAG00000056055) timm44 (ENSSSAG00000055890) fbn2b (ENSSSAG00000007909) cers4a (ENSSSAG00000007285) ENSSSAG00000007264 TIM13 (ENSSSAG00000007258) ENSSSAG00000007254 #30 nduab (ENSSSAG00000007249) #29 ENSSSAG00000071191 #27 ranb3 (ENSSSAG00000007242) #32 ctns (ENSSSAG00000007234) ENSSSAG00000007228 ENSSSAG00000007224 Salmoninae ANCESTRAL SPECIES 248 ENSGT00940000163715.b ENSGT00950000183158.A.e.b ENSGT00940000154412.C.d.b ENSGT00390000000051.a.a ENSGT00940000154595.hb ENSGT00940000163126.a.b.j #22 ENSGT00940000158995.a.h #23 ENSGT00940000161659.z #24 ENSGT00940000159258.d.c ENSGT00940000161913.b ENSGT00390000013841.db.b.b ENSGT00950000183110.b.a.c.g ENSGT00940000160036.f ENSGT00940000159946.f ENSGT00390000012913.a.b.d ENSGT00940000160926.c ENSGT00940000158649.a.a.b ENSGT00940000175923 ENSGT00390000017748.b ENSGT00940000160753 ENSGT00390000014856 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00950000182993.A.a.i.d #27 ENSGT00390000012434.b #29 ENSGT00390000007212.c #30 ENSGT00940000165636.d ENSGT00390000014000.d ENSGT00940000160104.v ENSGT00940000159993 ENSGT00940000163715.b ENSGT00940000155273.j ENSGT01030000234515.a.b.b.a.d ENSGT00950000183158.B.b ENSGT00950000183158.A.e.b ENSGT00940000154412.C.d.b ENSGT00390000000051.a.a ENSGT00940000154595.hb ENSGT00940000163126.a.b.j.a #22 ENSGT00940000158995.a.h #23 ENSGT00940000163126.a.b.j.b #22 ENSGT00940000159258.d.c ENSGT00940000161913.b ENSGT00390000013841.db.b.b ENSGT00950000183110.b.a.c.g ENSGT00940000160036.f ENSGT00940000159946.f ENSGT00390000012913.a.b.d ENSGT00940000160926.c ENSGT00940000158649.a.a.b ENSGT00390000017748.b ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199.c Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000158588.d.a.a #32 ENSGT00950000182993.A.a.i.d #27 ENSGT00390000012434.b #29 ENSGT00390000007212.c #30 ENSGT00940000165636.d ENSGT00390000014000.d ENSGT00940000160104.v ENSGT00940000159993 ENSGT00940000163715.b ENSGT01030000234515.a.b.b.a.d ENSGT00950000183158.B.b ENSGT00950000183158.A.e.b ENSGT00940000154412.C.d.b ENSGT00390000000051.a.a ENSGT00940000154595.hb ENSGT00940000163126.a.b.j.a #22 ENSGT00940000158995.a.h #23 ENSGT00940000161659.z #24 ENSGT00940000159258.d.c ENSGT00940000161913.b ENSGT00390000013841.db.b.b ENSGT00940000160036.f ENSGT00940000159946.f ENSGT00390000012913.a.b.d ENSGT00940000160926.c ENSGT00940000158649.a.a.b ENSGT00390000017748.b ENSGT00940000160753.g ENSGT00390000014856 ENSGT00940000165199.c ENSGT00940000160699.c Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000158588.d.a.a #32 ENSGT00950000182993.A.a.i.d #27 ENSGT00390000012434.b #29 ENSGT00390000007212.c #30 ENSGT00940000165636.d ENSGT00390000014000.d ENSGT00940000160104.v ENSGT00940000159993 ENSGT00940000163715.b ENSGT01030000234515.a.b.b.a.d ENSGT00950000183158.B.b ENSGT00950000183158.A.e.b ENSGT00940000154412.C.d.b ENSGT00390000000051.a.a ENSGT00940000154595.hb ENSGT00940000163126.a.b.j.a #22 ENSGT00940000158995.a.h #23 ENSGT00940000161659.z #24 ENSGT00940000159258.d.c ENSGT00940000161913.b ENSGT00390000013841.db.b.b ENSGT00940000160036.f ENSGT00940000159946.f ENSGT00390000012913.a.b.d ENSGT00940000160926.c ENSGT00940000158649.a.a.b ENSGT00390000017748.b ENSGT00940000160753.g ENSGT00390000014856 ENSGT00940000165199.c ENSGT00940000160699.c Chinook salmon MODERN SPECIES 30 ccl25b (ENSOTSG00005033528) ctns (ENSOTSG00005033532) ENSOTSG00005033534 RANBP3 (ENSOTSG00005033535) #32 ENSOTSG00005033536 #27 ndufa11 (ENSOTSG00005033537) #29 VMAC (ENSOTSG00005033538) #30 larp6b (ENSOTSG00005033539) timm13 (ENSOTSG00005033540) ENSOTSG00005033541 ENSOTSG00005033542 ENSOTSG00005033543 cers4a (ENSOTSG00005033549) ENSOTSG00005033698 hnrnpm (ENSOTSG00005033702) ENSOTSG00005033710 #22 marchf2 (ENSOTSG00005033809) #23 rab11ba (ENSOTSG00005033811) #24 PIP5K1C (ENSOTSG00005033823) gpx4b (ENSOTSG00005033856) POLR2E (ENSOTSG00005033858) tjp3 (ENSOTSG00005033899) ENSOTSG00005033995 ENSOTSG00005034043 tm6sf2b (ENSOTSG00005034044) hapln4 (ENSOTSG00005034045) RNF126 (ENSOTSG00005034046) bsg (ENSOTSG00005034047) ENSOTSG00005034048 NELL2 (ENSOTSG00005034120) TMEM117 (ENSOTSG00005038492) Coho salmon MODERN SPECIES 24 ENSOKIG00005001482 #27 ndufa11 (ENSOKIG00005001489) #29 VMAC (ENSOKIG00005001491) #30 larp6b (ENSOKIG00005001496) ENSOKIG00005001498 timm13 (ENSOKIG00005001502) ENSOKIG00005001506 ENSOKIG00005001523 ENSOKIG00005001563 ENSOKIG00005001568 ENSOKIG00005001573 fbn2b (ENSOKIG00005001689) CTXN1 (ENSOKIG00005003363) timm44 (ENSOKIG00005003384) hnrnpm (ENSOKIG00005003428) ENSOKIG00005003507 #22 marchf2 (ENSOKIG00005003528) #23 ENSOKIG00005003533 #22 PIP5K1C (ENSOKIG00005003580) gpx4a (ENSOKIG00005003635) POLR2E (ENSOKIG00005003644) tjp3 (ENSOKIG00005003661) SBNO2 (ENSOKIG00005003865) tm6sf2b (ENSOKIG00005006832) hapln4 (ENSOKIG00005006870) NCAN (ENSOKIG00005006893) ENSOKIG00005006913 nr2c2ap (ENSOKIG00005006917) rfxank (ENSOKIG00005006934) borcs8 (ENSOKIG00005006961) ENSOKIG00005006978 Rainbow trout MODERN SPECIES ENSOMYG00000001492 #30 ENSOMYG00000001534 ENSOMYG00000001559 ENSOMYG00000001586 ENSOMYG00000060303 ENSOMYG00000001903 ENSOMYG00000056939 ENSOMYG00000002035 cers4a (ENSOMYG00000002074) ENSOMYG00000075861 ENSOMYG00000006445 ENSOMYG00000059265 ENSOMYG00000015162 hnrnpm (ENSOMYG00000016801) ENSOMYG00000056328 ENSOMYG00000016866 #22 ENSOMYG00000017055 #23 rab11ba (ENSOMYG00000017065) #24 ENSOMYG00000017142 ENSOMYG00000017608 ENSOMYG00000017619 ENSOMYG00000017800 tm6sf2b (ENSOMYG00000018927) hapln4 (ENSOMYG00000018953) ENSOMYG00000018972 nr2c2ap (ENSOMYG00000018999) rfxank (ENSOMYG00000019053) borcs8 (ENSOMYG00000019073) ENSOMYG00000019081 ENSOMYG00000071441 ENSOMYG00000071292 Salmo ANCESTRAL SPECIES 9 ENSGT00390000005338.b ENSGT00940000176016 ENSGT00990000211766 ENSGT00950000182993.A.a.i.d #27 ENSGT00390000012434.b #29 ENSGT00390000007212.c #30 ENSGT00940000165636.d ENSGT00390000014000.d ENSGT01030000235960 ENSGT00940000159993 ENSGT00940000163715.b ENSGT00950000183158.A.e.b ENSGT00940000154412.C.d.b ENSGT00390000000051.a.a ENSGT00940000154595.hb ENSGT00940000163126.a.b.j.a #22 ENSGT00940000158995.a.h #23 ENSGT00940000163126.a.b.j.b #22 ENSGT00940000159258.d.c ENSGT00940000161913.b ENSGT00390000013841.db.b.b ENSGT00950000183110.b.a.c.g ENSGT00940000160036.f ENSGT00940000159946.f ENSGT00390000012913.a.b.d ENSGT00940000160926.c ENSGT00940000158649.a.a.b ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000165199.c ENSGT00940000160699.c Atlantic salmon MODERN SPECIES 7 ENSSSAG00000109131 ccl25b (ENSSSAG00000071212) ctns (ENSSSAG00000071207) ENSSSAG00000071203 ENSSSAG00000110552 #27 ENSSSAG00000071179 ENSSSAG00000115635 #30 ENSSSAG00000071162 ENSSSAG00000070832 ENSSSAG00000070814 ENSSSAG00000120606 fbn2b (ENSSSAG00000057875) ENSSSAG00000057559 timm44 (ENSSSAG00000057134) ENSSSAG00000057088 ENSSSAG00000057072 #22 ENSSSAG00000116883 #23 ENSSSAG00000084042 #22 ENSSSAG00000056764 GPX4 (ENSSSAG00000056734) ENSSSAG00000056723 ARHGAP45 (ENSSSAG00000054462) tjp3 (ENSSSAG00000053555) ENSSSAG00000042331 ENSSSAG00000084566 tm6sf2b (ENSSSAG00000041983) hpln4 (ENSSSAG00000041956) NCAN (ENSSSAG00000041912) rfxank (ENSSSAG00000041890) borcs8 (ENSSSAG00000041888) ENSSSAG00000041883 River trout MODERN SPECIES 8 ctns (ENSSTUG00000007214) ENSSTUG00000007232 ENSSTUG00000007256 #27 ndufa11 (ENSSTUG00000007259) #29 VMAC (ENSSTUG00000007267) #30 larp6b (ENSSTUG00000007274) timm13 (ENSSTUG00000007289) ENSSTUG00000007306 ENSSTUG00000007321 ENSSTUG00000007401 ENSSTUG00000007409 fbn2b (ENSSTUG00000007474) CTXN1 (ENSSTUG00000009828) timm44 (ENSSTUG00000009859) hnrnpm (ENSSTUG00000010219) ENSSTUG00000010235 #22 marchf2 (ENSSTUG00000010270) #23 ENSSTUG00000010281 #22 PIP5K1C (ENSSTUG00000010302) ENSSTUG00000010440 GPX4 (ENSSTUG00000010445) POLR2E (ENSSTUG00000010487) tjp3 (ENSSTUG00000010519) ENSSTUG00000010626 SBNO2 (ENSSTUG00000010644) ENSSTUG00000010783 ENSSTUG00000010790 tm6sf2b (ENSSTUG00000010793) hapln4 (ENSSTUG00000010840) NCAN (ENSSTUG00000010848) rfxank (ENSSTUG00000010912) Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00390000000672.a.a.d ENSGT00940000160699.c ENSGT00940000165199.c ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748.b ENSGT00940000158649.a.a.b ENSGT00940000160926.c ENSGT00390000012913.a.b.d ENSGT00940000159946.f ENSGT00940000160036.f ENSGT00950000183110.b.a.c.g ENSGT00390000013841.db.b.b ENSGT00940000161913.b ENSGT00940000159258.d.c ENSGT00940000163126.a.b.j.b #22 ENSGT00940000158995.a.h #23 ENSGT00940000163126.a.b.j.a #22 ENSGT00940000154595.hb ENSGT00390000000051.a.a ENSGT00940000154412.C.d.b ENSGT00950000183158.A.e.b ENSGT00950000183158.B.b ENSGT01030000234515.a.b.b.a.d ENSGT00940000155273.j ENSGT00940000163715.b ENSGT00940000159993 ENSGT00940000160104.v ENSGT00390000014000.d ENSGT00940000165636.d ENSGT00390000007212.c #30 Salmo ANCESTRAL SPECIES 9 ENSGT00940000158163.a.g ENSGT00390000000672.a.a.d ENSGT00940000160699.c ENSGT00940000165199.c ENSGT00390000014856 ENSGT00940000160753 ENSGT00940000158649.a.a.b ENSGT00940000160926.c ENSGT00390000012913.a.b.d ENSGT00940000159946.f ENSGT00940000160036.f ENSGT00950000183110.b.a.c.g ENSGT00390000013841.db.b.b ENSGT00940000161913.b ENSGT00940000159258.d.c ENSGT00940000163126.a.b.j.b #22 ENSGT00940000158995.a.h #23 ENSGT00940000163126.a.b.j.a #22 ENSGT00940000154595.hb ENSGT00390000000051.a.a ENSGT00940000154412.C.d.b ENSGT00950000183158.A.e.b ENSGT00940000163715.b ENSGT00940000159993 ENSGT01030000235960 ENSGT00390000014000.d ENSGT00940000165636.d ENSGT00390000007212.c #30 ENSGT00390000012434.b #29 ENSGT00950000182993.A.a.i.d #27 ENSGT00990000211766 Atlantic salmon MODERN SPECIES 7 tmem161a (ENSSSAG00000041706) mef2b (ENSSSAG00000041843) ENSSSAG00000041883 borcs8 (ENSSSAG00000041888) rfxank (ENSSSAG00000041890) NCAN (ENSSSAG00000041912) hpln4 (ENSSSAG00000041956) tm6sf2b (ENSSSAG00000041983) ENSSSAG00000084566 ENSSSAG00000042331 tjp3 (ENSSSAG00000053555) ARHGAP45 (ENSSSAG00000054462) ENSSSAG00000056723 GPX4 (ENSSSAG00000056734) ENSSSAG00000056764 ENSSSAG00000084042 #22 ENSSSAG00000116883 #23 ENSSSAG00000057072 #22 ENSSSAG00000057088 timm44 (ENSSSAG00000057134) ENSSSAG00000057559 fbn2b (ENSSSAG00000057875) ENSSSAG00000120606 ENSSSAG00000070814 ENSSSAG00000070832 ENSSSAG00000071162 ENSSSAG00000115635 #30 ENSSSAG00000071179 ENSSSAG00000110552 #27 ENSSSAG00000071203 ctns (ENSSSAG00000071207) River trout MODERN SPECIES 8 ENSSTUG00000010945 borcs8 (ENSSTUG00000010930) rfxank (ENSSTUG00000010912) NCAN (ENSSTUG00000010848) hapln4 (ENSSTUG00000010840) tm6sf2b (ENSSTUG00000010793) ENSSTUG00000010790 ENSSTUG00000010783 SBNO2 (ENSSTUG00000010644) ENSSTUG00000010626 tjp3 (ENSSTUG00000010519) POLR2E (ENSSTUG00000010487) GPX4 (ENSSTUG00000010445) ENSSTUG00000010440 PIP5K1C (ENSSTUG00000010302) ENSSTUG00000010281 #22 marchf2 (ENSSTUG00000010270) #23 ENSSTUG00000010235 #22 hnrnpm (ENSSTUG00000010219) timm44 (ENSSTUG00000009859) CTXN1 (ENSSTUG00000009828) fbn2b (ENSSTUG00000007474) ENSSTUG00000007409 ENSSTUG00000007401 ENSSTUG00000007321 ENSSTUG00000007306 timm13 (ENSSTUG00000007289) larp6b (ENSSTUG00000007274) VMAC (ENSSTUG00000007267) #30 ndufa11 (ENSSTUG00000007259) #29 ENSSTUG00000007256 #27 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000163126.a.b.j.b #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000163126.a.b.j.b #22 Coho salmon MODERN SPECIES 24 tmem161a (ENSOKIG00005007019) mef2b (ENSOKIG00005006985) ENSOKIG00005006978 borcs8 (ENSOKIG00005006961) rfxank (ENSOKIG00005006934) nr2c2ap (ENSOKIG00005006917) ENSOKIG00005006913 NCAN (ENSOKIG00005006893) hapln4 (ENSOKIG00005006870) tm6sf2b (ENSOKIG00005006832) SBNO2 (ENSOKIG00005003865) tjp3 (ENSOKIG00005003661) POLR2E (ENSOKIG00005003644) gpx4a (ENSOKIG00005003635) PIP5K1C (ENSOKIG00005003580) ENSOKIG00005003533 #22 marchf2 (ENSOKIG00005003528) #23 ENSOKIG00005003507 #22 hnrnpm (ENSOKIG00005003428) timm44 (ENSOKIG00005003384) CTXN1 (ENSOKIG00005003363) fbn2b (ENSOKIG00005001689) ENSOKIG00005001573 ENSOKIG00005001568 ENSOKIG00005001563 ENSOKIG00005001523 ENSOKIG00005001506 timm13 (ENSOKIG00005001502) ENSOKIG00005001498 larp6b (ENSOKIG00005001496) VMAC (ENSOKIG00005001491) #30 Huchen MODERN SPECIES 248 ENSHHUG00000028673 ENSHHUG00000028635 CTXN1 (ENSHHUG00000028630) timm44 (ENSHHUG00000028593) hnrnpm (ENSHHUG00000028579) ENSHHUG00000028530 #22 marchf2 (ENSHHUG00000028524) #23 rab11ba (ENSHHUG00000028501) #24 PIP5K1C (ENSHHUG00000028497) GPX4 (ENSHHUG00000028495) POLR2E (ENSHHUG00000028434) ARHGAP45 (ENSHHUG00000028230) tjp3 (ENSHHUG00000028117) SBNO2 (ENSHHUG00000028050) ENSHHUG00000028044 tm6sf2b (ENSHHUG00000028021) hapln4 (ENSHHUG00000028013) ENSHHUG00000027999 ENSHHUG00000027993 ENSHHUG00000027978 mtap (ENSHHUG00000027929) Northern pike DUPLICATION Northern pike MODERN SPECIES 7 ctns (ENSELUG00000021756) RANBP3 (ENSELUG00000021738) #32 ENSELUG00000021701 #27 NDUAB (ENSELUG00000030012) #29 VMAC (ENSELUG00000021677) #30 larp6b (ENSELUG00000031284) timm13 (ENSELUG00000025209) ENSELUG00000026582 ENSELUG00000021624 ENSELUG00000021433 cers4a (ENSELUG00000021425) fbn2b (ENSELUG00000021359) CTXN1 (ENSELUG00000021223) timm44 (ENSELUG00000021214) hnrnpm (ENSELUG00000021183) ENSELUG00000020948 #22 marchf2 (ENSELUG00000020908) #23 ENSELUG00000000916 #22 PIP5K1C (ENSELUG00000020850) GPX4 (ENSELUG00000001177) polr2e (ENSELUG00000020646) ARHGAP45 (ENSELUG00000020523) tjp3 (ENSELUG00000020504) SBNO2 (ENSELUG00000020457) tm6sf2b (ENSELUG00000020227) hapln4 (ENSELUG00000020165) NCAN (ENSELUG00000020141) nr2c2ap (ENSELUG00000020134) rfxank (ENSELUG00000032127) borcs8 (ENSELUG00000020090) ENSELUG00000020075 Northern pike MODERN SPECIES 7 tmem161a (ENSELUG00000020049) mef2b (ENSELUG00000020071) ENSELUG00000020075 borcs8 (ENSELUG00000020090) rfxank (ENSELUG00000032127) nr2c2ap (ENSELUG00000020134) NCAN (ENSELUG00000020141) hapln4 (ENSELUG00000020165) tm6sf2b (ENSELUG00000020227) SBNO2 (ENSELUG00000020457) tjp3 (ENSELUG00000020504) ARHGAP45 (ENSELUG00000020523) polr2e (ENSELUG00000020646) GPX4 (ENSELUG00000001177) PIP5K1C (ENSELUG00000020850) ENSELUG00000000916 #22 marchf2 (ENSELUG00000020908) #23 ENSELUG00000020948 #22 hnrnpm (ENSELUG00000021183) timm44 (ENSELUG00000021214) CTXN1 (ENSELUG00000021223) fbn2b (ENSELUG00000021359) cers4a (ENSELUG00000021425) ENSELUG00000021433 ENSELUG00000021624 ENSELUG00000026582 timm13 (ENSELUG00000025209) larp6b (ENSELUG00000031284) VMAC (ENSELUG00000021677) #30 NDUAB (ENSELUG00000030012) #29 ENSELUG00000021701 #27 Otomorpha ANCESTRAL SPECIES 31 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00390000000051.a ENSGT00940000154412.C.d ENSGT00950000183158.A ENSGT01030000234515.a.b.b.a ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000159993 ENSGT00390000014000 ENSGT00950000182983.B.a.a ENSGT00940000157375.c ENSGT00940000155404.i.b ENSGT00390000014361 ENSGT00940000156845 Clupeiformes ANCESTRAL SPECIES 9 ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946.g ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00940000170739 ENSGT00940000165680.A ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00390000000051.a ENSGT00940000154412.C.d ENSGT00950000183158.A ENSGT01030000234515.a.b.b.a ENSGT00940000163715.b ENSGT00510000047872 ENSGT00940000159993 ENSGT00390000014000 ENSGT00950000182983.B.a.a ENSGT00940000157375.c ENSGT00940000155404.i.b ENSGT00390000014361 ENSGT00940000156845 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 1 MAU2 (ENSCHAG00000012511) tmem161a (ENSCHAG00000012435) mef2b (ENSCHAG00000012380) ENSCHAG00000012369 borcs8 (ENSCHAG00000012351) rfxank (ENSCHAG00000012325) nr2c2ap (ENSCHAG00000012339) NCAN (ENSCHAG00000012307) hapln4 (ENSCHAG00000012298) tm6sf2b (ENSCHAG00000012276) SBNO2 (ENSCHAG00000011978) tjp3 (ENSCHAG00000011857) ARHGAP45 (ENSCHAG00000010939) ENSCHAG00000010805 PIP5K1C (ENSCHAG00000009971) ENSCHAG00000009795 #22 MAP1S (ENSCHAG00000009783) CARTPT (ENSCHAG00000009775) ENSCHAG00000009762 ENSCHAG00000009752 gadd45ba (ENSCHAG00000009738) GNG7 (ENSCHAG00000009733) diras1a (ENSCHAG00000009729) APC2 (ENSCHAG00000009722) ENSCHAG00000009708 reep6 (ENSCHAG00000009687) zgc:113223 (ENSCHAG00000009607) ENSCHAG00000009586 ENSCHAG00000009577 thop1 (ENSCHAG00000007121) sgta (ENSCHAG00000007047) Atlantic herring MODERN SPECIES 1 s1pr4 (ENSCHAG00000004854) MYO9B (ENSCHAG00000004904) use1 (ENSCHAG00000005482) insrb (ENSCHAG00000005950) ARHGEF18 (ENSCHAG00000016034) enc3 (ENSCHAG00000016176) timm13 (ENSCHAG00000016192) ENSCHAG00000016219 lsm7 (ENSCHAG00000016232) ENSCHAG00000016253 cers4a (ENSCHAG00000016263) fbn2b (ENSCHAG00000016353) CTXN1 (ENSCHAG00000019520) timm44 (ENSCHAG00000020190) hnrnpm (ENSCHAG00000019546) ENSCHAG00000020582 #22 marchf2 (ENSCHAG00000020646) #23 ENSCHAG00000020666 ENSCHAG00000020682 zgc:194221 (ENSCHAG00000020720) C1QTNF7 (ENSCHAG00000020734) CC2D2A (ENSCHAG00000020750) fbxl5 (ENSCHAG00000021161) CPEB2 (ENSCHAG00000021191) ndnf (ENSCHAG00000021283) prdm5 (ENSCHAG00000021298) CELA3A (ENSCHAG00000021369) slc34a2b (ENSCHAG00000021385) ENSCHAG00000021903 psmb11b (ENSCHAG00000021913) ENSCHAG00000021946 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 4 s1pr4 (ENSDCDG00000027040) MYO9B (ENSDCDG00000027057) use1 (ENSDCDG00000027172) insrb (ENSDCDG00000027198) ARHGEF18 (ENSDCDG00000028647) enc3 (ENSDCDG00000028653) timm13 (ENSDCDG00000028654) ENSDCDG00000028657 lsm7 (ENSDCDG00000028667) ENSDCDG00000028670 cers4a (ENSDCDG00000028672) fbn2b (ENSDCDG00000028772) CTXN1 (ENSDCDG00000031272) timm44 (ENSDCDG00000031285) hnrnpm (ENSDCDG00000031346) ENSDCDG00000031365 #22 marchf2 (ENSDCDG00000031369) #23 ENSDCDG00000031377 #22 ENSDCDG00000031414 ENSDCDG00000031504 ENSDCDG00000031508 ARHGAP45 (ENSDCDG00000031528) tjp3 (ENSDCDG00000032292) SBNO2 (ENSDCDG00000032402) tm6sf2b (ENSDCDG00000032415) hapln4 (ENSDCDG00000032416) NCAN (ENSDCDG00000032425) ENSDCDG00000032481 nr2c2ap (ENSDCDG00000018947) rfxank (ENSDCDG00000018958) borcs8 (ENSDCDG00000018961) Denticle herring MODERN SPECIES 4 mef2b (ENSDCDG00000018974) ENSDCDG00000018965 borcs8 (ENSDCDG00000018961) rfxank (ENSDCDG00000018958) nr2c2ap (ENSDCDG00000018947) ENSDCDG00000032481 NCAN (ENSDCDG00000032425) hapln4 (ENSDCDG00000032416) tm6sf2b (ENSDCDG00000032415) SBNO2 (ENSDCDG00000032402) tjp3 (ENSDCDG00000032292) ARHGAP45 (ENSDCDG00000031528) ENSDCDG00000031508 ENSDCDG00000031504 ENSDCDG00000031414 ENSDCDG00000031377 #22 marchf2 (ENSDCDG00000031369) #23 ENSDCDG00000031365 #22 hnrnpm (ENSDCDG00000031346) timm44 (ENSDCDG00000031285) CTXN1 (ENSDCDG00000031272) fbn2b (ENSDCDG00000028772) cers4a (ENSDCDG00000028672) ENSDCDG00000028670 lsm7 (ENSDCDG00000028667) ENSDCDG00000028657 timm13 (ENSDCDG00000028654) enc3 (ENSDCDG00000028653) ARHGEF18 (ENSDCDG00000028647) insrb (ENSDCDG00000027198) use1 (ENSDCDG00000027172) Otophysi ANCESTRAL SPECIES 437 ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000154595 Characiphysae ANCESTRAL SPECIES 28 ENSGT00390000004097.a.e ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946.g ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00940000163581.f.a ENSGT00940000163581.f.b ENSGT00940000154611.ad.a ENSGT00940000163422 ENSGT00940000159228.b.a.b ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00390000012765 ENSGT00940000165098 ENSGT00950000182916.a.b.a.a.a.a Channel catfish MODERN SPECIES 1 GATAD2A (ENSIPUG00000000676) tmem161a (ENSIPUG00000000670) mef2b (ENSIPUG00000000662) tmem221 (ENSIPUG00000000648) borcs8 (ENSIPUG00000000631) rfxank (ENSIPUG00000000622) nr2c2ap (ENSIPUG00000000609) NCAN (ENSIPUG00000000592) hapln4 (ENSIPUG00000000569) SBNO2 (ENSIPUG00000000537) tjp3 (ENSIPUG00000000521) ARHGAP45 (ENSIPUG00000000496) gpx4a (ENSIPUG00000000491) gpx4a (ENSIPUG00000025109) Pip5k1c (ENSIPUG00000025104) rab11b (ENSIPUG00000025100) #22 march2 (ENSIPUG00000025099) #23 hnrnpm (ENSIPUG00000025097) ifi44f5 (ENSIPUG00000025096) GPR52 (ENSIPUG00000025095) rabgap1l (ENSIPUG00000025092) fam163a (ENSIPUG00000025089) tdrd5 (ENSIPUG00000025087) nphs2 (ENSIPUG00000025085) axdnd1 (ENSIPUG00000025082) nrd1b (ENSIPUG00000025078) ENSIPUG00000025076 atpaf1 (ENSIPUG00000025073) frem1b (ENSIPUG00000025069) nfia (ENSIPUG00000025065) tm2d1 (ENSIPUG00000025063) Characiphysae_b ANCESTRAL SPECIES 25 ENSGT00390000004097.a.e ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946.g ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00940000163581.f.a ENSGT00940000163581.f.b ENSGT00940000154611.ad.a ENSGT00940000163422 ENSGT00940000159228.b.a.b ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00390000012765 ENSGT00940000165098 ENSGT00950000182916.a.b.a.a.a.a Electric eel MODERN SPECIES 89 fam32a (ENSEEEG00000015694) mrpl54 (ENSEEEG00000015695) malt2 (ENSEEEG00000015696) safb (ENSEEEG00000015699) ENSEEEG00000015705 ENSEEEG00000015721 lpl (ENSEEEG00000015950) tpm4a (ENSEEEG00000016378) hsh2d (ENSEEEG00000016589) ENSEEEG00000016596 gpc1a (ENSEEEG00000016602) gpc5b (ENSEEEG00000016604) aqp12 (ENSEEEG00000016608) rpp21 (ENSEEEG00000016609) PIP5K1C (ENSEEEG00000016611) ENSEEEG00000016614 #22 marchf2 (ENSEEEG00000016647) #23 hnrnpm (ENSEEEG00000016654) ifi44f5 (ENSEEEG00000016708) RABGAP1L (ENSEEEG00000016729) FAM163A (ENSEEEG00000016965) ENSEEEG00000016967 nphs2 (ENSEEEG00000016969) axdnd1 (ENSEEEG00000016970) nrd1b (ENSEEEG00000016978) ENSEEEG00000017124 atpaf1 (ENSEEEG00000017125) frem1b (ENSEEEG00000017127) nfia (ENSEEEG00000017133) tm2d1 (ENSEEEG00000017176) PATJ (ENSEEEG00000017177) Characoidei ANCESTRAL SPECIES 26 ENSGT00390000004097.a.e ENSGT00390000000672.a.a ENSGT00940000160699 ENSGT00940000165199 ENSGT00390000014856 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946.g ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00980000198641 ENSGT00940000159258.d ENSGT00940000163126.a.b #22 ENSGT00940000161659 #24 ENSGT00940000158995.a #23 ENSGT00940000154595 ENSGT00940000163581.f.b.e ENSGT00940000154611.ad.a ENSGT00940000163422 ENSGT00940000159228.b.a.b ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00940000155026.d ENSGT00940000159943 ENSGT00390000012765 ENSGT00940000165098 ENSGT00950000182916.a.b.a.a.a.a Mexicana tetra MODERN SPECIES 20 ENSAMXG00000032225 mef2b (ENSAMXG00000036998) borcs8 (ENSAMXG00000042276) ENSAMXG00000037896 rfxank (ENSAMXG00000037392) nr2c2ap (ENSAMXG00000015810) NCAN (ENSAMXG00000015830) ENSAMXG00000041661 hapln4 (ENSAMXG00000015851) tm6sf2b (ENSAMXG00000032223) SBNO2 (ENSAMXG00000015881) tjp3 (ENSAMXG00000015916) ARHGAP45 (ENSAMXG00000015968) gpx4a (ENSAMXG00000015995) PIP5K1C (ENSAMXG00000016009) ENSAMXG00000037623 #22 marchf2 (ENSAMXG00000030875) #23 hnrnpm (ENSAMXG00000016073) RABGAP1L (ENSAMXG00000016106) FAM163A (ENSAMXG00000040583) ENSAMXG00000017846 nphs2 (ENSAMXG00000017851) axdnd1 (ENSAMXG00000017867) nrd1b (ENSAMXG00000017875) ENSAMXG00000042882 atpaf1 (ENSAMXG00000017879) frem1b (ENSAMXG00000017882) nfia (ENSAMXG00000017908) tm2d1 (ENSAMXG00000017918) PATJ (ENSAMXG00000017920) ENSAMXG00000039719 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000163126.a.b #22 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 275 ENSGT00940000163581.f.a.gb.b.b ENSGT00940000163581.f.a.hb.b ENSGT00940000163126.a.b.q #22 ENSGT00940000158995.a.c #23 ENSGT00940000154595.gb ENSGT00940000159258.d.f ENSGT00980000198641.b ENSGT00390000013841.hb.a ENSGT00950000183110.b.a.c.a ENSGT00940000160036.c ENSGT00940000159946.g.a ENSGT00390000012913.a.b.b ENSGT00940000160926.a ENSGT00940000158649.a.a.q.b.a.a ENSGT00940000158649.a.a.q.b.b ENSGT00390000017748.c ENSGT00940000160753.c ENSGT00390000014856.l Cyprininae_a ANCESTRAL SPECIES 91 ENSGT01040000244250 ENSGT00940000155136.hb ENSGT00940000157668.n ENSGT00950000182916.a.b.a.a.a.a.d ENSGT00940000165098 ENSGT00390000012765.a ENSGT00940000159943.e.b ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b.f ENSGT00390000001360.r.b ENSGT00940000159228.b.a.b.b ENSGT00940000154611.ad.a.k.a ENSGT00940000163422.c ENSGT00940000163581.f.a.gb.b.a.b ENSGT00940000163126.a.b.q #22 ENSGT00940000158995.a.c #23 ENSGT00940000154595.gb ENSGT00940000159258.d.f ENSGT00980000198641.b ENSGT00940000165680.A ENSGT00390000013841.hb.a ENSGT00950000183110.b.a.c.a ENSGT00940000160036.c ENSGT00940000159946.g.a ENSGT00390000012913.a.b.b ENSGT00940000160926.a ENSGT00940000158649.a.a.q.b.a.a ENSGT00940000158649.a.a.q.b.b ENSGT00390000017748.c ENSGT00940000160753.c Golden-line barbel MODERN SPECIES 266 nfia (ENSSGRG00000028874) frem1b (ENSSGRG00000028877) atpaf1 (ENSSGRG00000028878) ENSSGRG00000028880 ENSSGRG00000028881 nphs2 (ENSSGRG00000028882) tdrd5 (ENSSGRG00000028883) FAM163A (ENSSGRG00000028884) RABGAP1L (ENSSGRG00000028885) GPR52 (ENSSGRG00000029349) ENSSGRG00000029351 ENSSGRG00000029352 ENSSGRG00000029354 #22 marchf2 (ENSSGRG00000029395) #23 hnrnpm (ENSSGRG00000029399) PIP5K1C (ENSSGRG00000029403) gpx4a (ENSSGRG00000029454) polr2eb (ENSSGRG00000029455) tjp3 (ENSSGRG00000029490) SBNO2 (ENSSGRG00000029852) tm6sf2b (ENSSGRG00000029854) hapln4 (ENSSGRG00000029878) ENSSGRG00000029880 nr2c2ap (ENSSGRG00000029882) rfxank (ENSSGRG00000029883) borcs8 (ENSSGRG00000029884) ENSSGRG00000029886 mef2b (ENSSGRG00000029888) Common carp reference MODERN SPECIES 43 ENSCCRG00000081158 plekhb2 (ENSCCRG00000012221) ENSCCRG00000012223 stx6 (ENSCCRG00000068725) tal1 (ENSCCRG00000038628) PATJ (ENSCCRG00000006794) tm2d1 (ENSCCRG00000069940) nfia (ENSCCRG00000006812) atpaf1 (ENSCCRG00000056526) nphs2 (ENSCCRG00000027287) tdrd5 (ENSCCRG00000008348) ENSCCRG00000021988 ENSCCRG00000015467 ENSCCRG00000015510 ENSCCRG00000007709 ENSCCRG00000007547 #22 marchf2 (ENSCCRG00000079083) #23 hnrnpm (ENSCCRG00000075767) ENSCCRG00000021333 ENSCCRG00000064766 polr2eb (ENSCCRG00000040281) ENSCCRG00000062798 tjp3 (ENSCCRG00000038766) ENSCCRG00000074076 tm6sf2b (ENSCCRG00000004269) hapln4 (ENSCCRG00000004276) NCAN (ENSCCRG00000056685) nr2c2ap (ENSCCRG00000003841) rfxank (ENSCCRG00000070940) borcs8 (ENSCCRG00000003861) mef2b (ENSCCRG00000074177) Goldfish MODERN SPECIES 41 plekhb2 (ENSCARG00000038119) ENSCARG00000038127 stx6 (ENSCARG00000038137) ier5 (ENSCARG00000038184) tal1 (ENSCARG00000038192) pdzk1ip1 (ENSCARG00000038202) PATJ (ENSCARG00000038233) tm2d1 (ENSCARG00000038401) nfia (ENSCARG00000038465) atpaf1 (ENSCARG00000038973) ENSCARG00000038995 nphs2 (ENSCARG00000039018) FAM163A (ENSCARG00000039048) RABGAP1L (ENSCARG00000039108) ENSCARG00000040375 ENSCARG00000040462 #22 marchf2 (ENSCARG00000040593) #23 hnrnpm (ENSCARG00000040632) PIP5K1C (ENSCARG00000040940) gpx4a (ENSCARG00000041135) polr2eb (ENSCARG00000041231) ARHGAP45 (ENSCARG00000041408) tjp3 (ENSCARG00000041750) SBNO2 (ENSCARG00000042168) ENSCARG00000042732 tm6sf2b (ENSCARG00000042742) hapln4 (ENSCARG00000042763) NCAN (ENSCARG00000042792) nr2c2ap (ENSCARG00000042983) rfxank (ENSCARG00000043010) borcs8 (ENSCARG00000043032) Cyprininae ANCESTRAL SPECIES 11 ENSGT00940000154660.b ENSGT00940000155136.hb ENSGT00940000157668.n ENSGT00950000182916.a.b.a.a.a.a.d ENSGT00940000165098 ENSGT00390000012765.a ENSGT00940000159943.e.b ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b.e ENSGT00390000001360.r.a ENSGT00940000159228.b.a.b.a ENSGT00940000163422 ENSGT00940000154611.ad.a.k.b ENSGT00940000163581.f.a.hb.a ENSGT00940000163126.a.b.r #22 ENSGT00940000158995.a.d #23 ENSGT00940000154595.fb ENSGT00940000159258.d.e ENSGT00980000198641.a ENSGT00390000013841.hb.b ENSGT00950000183110.b.a.c.b ENSGT00940000160036.d ENSGT00940000159946.g.b ENSGT00390000012913.a.b.a ENSGT00940000160926.b ENSGT00940000158649.a.a.q.a ENSGT00390000017748.d.b Cyprininae_a ANCESTRAL SPECIES 509 ENSGT01030000234614.B.b.e ENSGT00390000001360.r.a ENSGT00940000159228.b.a.b.a ENSGT00940000154611.ad.a.k.b ENSGT00940000163581.f.a.hb.a ENSGT00940000163126.a.b.r #22 ENSGT00940000158995.a.d #23 ENSGT00940000154595.fb ENSGT00940000159258.d.e ENSGT00980000198641.a ENSGT00390000013841.hb.b ENSGT00950000183110.b.a.c.b ENSGT00940000160036.d ENSGT00940000159946.g.b Golden-line barbel MODERN SPECIES 156 ENSSGRG00000053710 tm2d1 (ENSSGRG00000053709) RAB38 (ENSSGRG00000053708) nfia (ENSSGRG00000053621) ENSSGRG00000053611 nrd1b (ENSSGRG00000053551) nphs2 (ENSSGRG00000053542) tdrd5 (ENSSGRG00000053539) FAM163A (ENSSGRG00000053538) RABGAP1L (ENSSGRG00000053485) ENSSGRG00000053477 ENSSGRG00000053473 ENSSGRG00000053471 ENSSGRG00000053469 ENSSGRG00000053468 ENSSGRG00000053448 #22 marchf2 (ENSSGRG00000053447) #23 hnrnpm (ENSSGRG00000053445) PIP5K1C (ENSSGRG00000053251) gpx4a (ENSSGRG00000053249) polr2eb (ENSSGRG00000053248) ARHGAP45 (ENSSGRG00000053182) tjp3 (ENSSGRG00000053146) SBNO2 (ENSSGRG00000053145) Common carp reference MODERN SPECIES 5 atpaf1 (ENSCCRG00000007113) ENSCCRG00000007115 nrd1b (ENSCCRG00000007124) axdnd1 (ENSCCRG00000008234) nphs2 (ENSCCRG00000008239) tdrd5 (ENSCCRG00000027290) FAM163A (ENSCCRG00000042112) ENSCCRG00000064638 ENSCCRG00000062100 ENSCCRG00000064952 ENSCCRG00000006777 ENSCCRG00000080900 ENSCCRG00000005187 ENSCCRG00000054259 ENSCCRG00000045234 ENSCCRG00000006640 #22 marchf2 (ENSCCRG00000073523) #23 hnrnpm (ENSCCRG00000006562) ENSCCRG00000040295 gpx4a (ENSCCRG00000021315) polr2eb (ENSCCRG00000021273) ENSCCRG00000061118 tjp3 (ENSCCRG00000020675) tm6sf2b (ENSCCRG00000001826) ENSCCRG00000032104 hapln4 (ENSCCRG00000001787) NCAN (ENSCCRG00000043312) nr2c2ap (ENSCCRG00000043316) rfxank (ENSCCRG00000050476) ENSCCRG00000042051 borcs8 (ENSCCRG00000042037) Goldfish DUPLICATION Goldfish MODERN SPECIES 14 UQCR11 (ENSCARG00000014267) ENSCARG00000014246 ENSCARG00000014235 frem1b (ENSCARG00000014102) ENSCARG00000014083 ENSCARG00000014079 ENSCARG00000014069 nrd1b (ENSCARG00000010174) axdnd1 (ENSCARG00000010026) nphs2 (ENSCARG00000010001) tdrd5 (ENSCARG00000009990) ENSCARG00000008654 ENSCARG00000008596 ENSCARG00000008556 ENSCARG00000008532 ENSCARG00000008493 #22 marchf2 (ENSCARG00000008487) #23 hnrnpm (ENSCARG00000008456) ENSCARG00000008392 ENSCARG00000008356 polr2eb (ENSCARG00000008336) ARHGAP45 (ENSCARG00000005840) tjp3 (ENSCARG00000005090) SBNO2 (ENSCARG00000004640) tm6sf2b (ENSCARG00000004588) hapln4 (ENSCARG00000004575) NCAN (ENSCARG00000003941) nr2c2ap (ENSCARG00000024787) rfxank (ENSCARG00000024768) borcs8 (ENSCARG00000024744) s1pr3a (ENSCARG00000024735) Goldfish MODERN SPECIES 14 ENSCARG00000004603 PATJ (ENSCARG00000004482) tm2d1 (ENSCARG00000004436) nfia (ENSCARG00000003945) frem1b (ENSCARG00000015099) ENSCARG00000015063 nrd1b (ENSCARG00000011749) axdnd1 (ENSCARG00000011591) nphs2 (ENSCARG00000011573) tdrd5 (ENSCARG00000011563) GPR52 (ENSCARG00000011555) RABGAP1L (ENSCARG00000011366) ENSCARG00000011340 ENSCARG00000011293 ENSCARG00000011257 ENSCARG00000011149 #22 marchf2 (ENSCARG00000011138) #23 hnrnpm (ENSCARG00000011102) ENSCARG00000010965 gpx4a (ENSCARG00000010945) polr2eb (ENSCARG00000010933) ARHGAP45 (ENSCARG00000007945) tjp3 (ENSCARG00000007843) SBNO2 (ENSCARG00000007703) hapln4 (ENSCARG00000007669) ENSCARG00000007661 ENSCARG00000007635 atp5f1d (ENSCARG00000007621) ENSCARG00000007589 ENSCARG00000007587 ENSCARG00000007580 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000163126.b.a #22 Osteoglossiformes ANCESTRAL SPECIES 752 ENSGT00940000163126.b.a #22 ENSGT00940000158995.a.b #23 P. kingsleyae DUPLICATION P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 4 MYO9B (ENSPKIG00000010594) ENSPKIG00000010912 INSR (ENSPKIG00000010986) ENSPKIG00000011061 ARHGEF18 (ENSPKIG00000011091) enc3 (ENSPKIG00000011160) timm13 (ENSPKIG00000011170) ENSPKIG00000011197 sppl2 (ENSPKIG00000011242) lsm7 (ENSPKIG00000011325) ENSPKIG00000011358 cers4a (ENSPKIG00000011374) fbn2b (ENSPKIG00000011440) CTXN1 (ENSPKIG00000011592) timm44 (ENSPKIG00000011604) rab11bb (ENSPKIG00000011640) #22 marchf2 (ENSPKIG00000011668) #23 ENSPKIG00000011703 #22 PIP5K1C (ENSPKIG00000011758) gpx4a (ENSPKIG00000011901) cp (ENSPKIG00000011931) hps3 (ENSPKIG00000011984) anos1b (ENSPKIG00000012096) ENSPKIG00000012168 ENSPKIG00000012202 si:ch211-262h13.5 (ENSPKIG00000012235) ENSPKIG00000012246 MELTF (ENSPKIG00000012270) DLG1 (ENSPKIG00000012310) ptmaa (ENSPKIG00000012342) pde6d (ENSPKIG00000012381) P. kingsleyae MODERN SPECIES 4 ENSPKIG00000012494 PEX5L (ENSPKIG00000012443) pde6d (ENSPKIG00000012381) ptmaa (ENSPKIG00000012342) DLG1 (ENSPKIG00000012310) MELTF (ENSPKIG00000012270) ENSPKIG00000012246 si:ch211-262h13.5 (ENSPKIG00000012235) ENSPKIG00000012202 ENSPKIG00000012168 anos1b (ENSPKIG00000012096) hps3 (ENSPKIG00000011984) cp (ENSPKIG00000011931) gpx4a (ENSPKIG00000011901) PIP5K1C (ENSPKIG00000011758) ENSPKIG00000011703 #22 marchf2 (ENSPKIG00000011668) #23 rab11bb (ENSPKIG00000011640) #22 timm44 (ENSPKIG00000011604) CTXN1 (ENSPKIG00000011592) fbn2b (ENSPKIG00000011440) cers4a (ENSPKIG00000011374) ENSPKIG00000011358 lsm7 (ENSPKIG00000011325) sppl2 (ENSPKIG00000011242) ENSPKIG00000011197 timm13 (ENSPKIG00000011170) enc3 (ENSPKIG00000011160) ARHGEF18 (ENSPKIG00000011091) ENSPKIG00000011061 INSR (ENSPKIG00000010986) P. kingsleyae MODERN SPECIES 17 ODF2L (ENSPKIG00000002567) DAB1 (ENSPKIG00000002310) c8b (ENSPKIG00000002158) C8A (ENSPKIG00000002126) si:ch211-188c16.1 (ENSPKIG00000002090) PLPP3 (ENSPKIG00000002028) bloc1s2 (ENSPKIG00000001971) USP24 (ENSPKIG00000001856) dhcr24 (ENSPKIG00000001778) ENSPKIG00000001741 lurap1 (ENSPKIG00000001725) ENSPKIG00000001642 OSBPL9 (ENSPKIG00000001482) ONECUT3 (ENSPKIG00000001423) ENSPKIG00000001410 ENSPKIG00000001389 #22 marchf2 (ENSPKIG00000001364) #23 hnrnpm (ENSPKIG00000001332) CTXN1 (ENSPKIG00000001312) ENSPKIG00000001257 ARHGEF18 (ENSPKIG00000001069) ENSPKIG00000000920 use1 (ENSPKIG00000000876) mfsd14a2 (ENSPKIG00000000844) ENSPKIG00000000729 CERS1 (ENSPKIG00000000675) mydgf (ENSPKIG00000000657) cope (ENSPKIG00000000623) loxl5b (ENSPKIG00000000573) ATCAY (ENSPKIG00000000549) ZFR2 (ENSPKIG00000000524) Asian bonytongue MODERN SPECIES 17 cirbpa (ENSSFOG00015009951) YJEFN3 (ENSSFOG00015009877) NDUFA13 (ENSSFOG00015009650) GATAD2A (ENSSFOG00015009592) MAU2 (ENSSFOG00015009561) ARMC6 (ENSSFOG00015033233) slc25a42 (ENSSFOG00015009477) tmem161a (ENSSFOG00015009392) borcs8 (ENSSFOG00015009345) ENSSFOG00015026145 tm6sf2a (ENSSFOG00015009281) ARHGAP45 (ENSSFOG00015009214) ENSSFOG00015009196 ENSSFOG00015032093 PIP5K1C (ENSSFOG00015009080) rab11bb (ENSSFOG00015006245) #22 MARCHF2 (ENSSFOG00015009018) #23 hnrnpm (ENSSFOG00015008815) CTXN1 (ENSSFOG00015032822) ENSSFOG00015008767 ARHGEF18 (ENSSFOG00015008667) INSR (ENSSFOG00015008555) use1 (ENSSFOG00015025821) mfsd14a2 (ENSSFOG00015007072) ENSSFOG00015028704 CERS1 (ENSSFOG00015008357) cope (ENSSFOG00015008318) mydgf (ENSSFOG00015008264) loxl5b (ENSSFOG00015008206) ATCAY (ENSSFOG00015008182) ZFR2 (ENSSFOG00015008157) Osteoglossocephalai ANCESTRAL SPECIES 1189 ENSGT00940000163126.b.b #22 ENSGT00940000158995.b #23 Osteoglossiformes ANCESTRAL SPECIES 2 ENSGT01050000244887.B ENSGT00940000156845 ENSGT00940000164530.f ENSGT00940000155404.g ENSGT00940000157375.c.a ENSGT00950000182983.B.a.a ENSGT00390000014000 ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 ENSGT00940000163715.b ENSGT01030000234515.a.b.b.a ENSGT00950000183158.A ENSGT00940000154412.C.d ENSGT00390000000051 ENSGT00940000163126.b.b #22 ENSGT00940000158995.a.a.a #23 ENSGT00940000159258.d ENSGT00980000198641 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 24 s1pr4 (ENSSFOG00015007287) MYO9B (ENSSFOG00015007204) ENSSFOG00015026640 INSR (ENSSFOG00015006996) ARHGEF18 (ENSSFOG00015006935) enc3 (ENSSFOG00015024763) timm13 (ENSSFOG00015006900) ENSSFOG00015006815 sppl2 (ENSSFOG00015006776) lsm7 (ENSSFOG00015006728) ENSSFOG00015006709 cers4a (ENSSFOG00015006652) fbn2b (ENSSFOG00015006450) CTXN1 (ENSSFOG00015025184) timm44 (ENSSFOG00015006426) ENSSFOG00015027151 #22 marchf2 (ENSSFOG00015031063) #23 ENSSFOG00015027051 #22 PIP5K1C (ENSSFOG00015006149) polr2eb (ENSSFOG00015006073) ENSSFOG00015031818 ENSSFOG00015006102 ARHGAP45 (ENSSFOG00015006049) tjp3 (ENSSFOG00015006025) sbno2a (ENSSFOG00015005861) tm6sf2b (ENSSFOG00015005813) hapln4 (ENSSFOG00015005804) NCAN (ENSSFOG00015005662) nr2c2ap (ENSSFOG00015005621) rfxank (ENSSFOG00015005610) ENSSFOG00015005605 Asian bonytongue MODERN SPECIES 24 MAU2 (ENSSFOG00015005511) ENSSFOG00015005591 ENSSFOG00015005605 rfxank (ENSSFOG00015005610) nr2c2ap (ENSSFOG00015005621) NCAN (ENSSFOG00015005662) hapln4 (ENSSFOG00015005804) tm6sf2b (ENSSFOG00015005813) sbno2a (ENSSFOG00015005861) tjp3 (ENSSFOG00015006025) ARHGAP45 (ENSSFOG00015006049) ENSSFOG00015006102 ENSSFOG00015031818 polr2eb (ENSSFOG00015006073) PIP5K1C (ENSSFOG00015006149) ENSSFOG00015027051 #22 marchf2 (ENSSFOG00015031063) #23 ENSSFOG00015027151 #22 timm44 (ENSSFOG00015006426) CTXN1 (ENSSFOG00015025184) fbn2b (ENSSFOG00015006450) cers4a (ENSSFOG00015006652) ENSSFOG00015006709 lsm7 (ENSSFOG00015006728) sppl2 (ENSSFOG00015006776) ENSSFOG00015006815 timm13 (ENSSFOG00015006900) enc3 (ENSSFOG00015024763) ARHGEF18 (ENSSFOG00015006935) INSR (ENSSFOG00015006996) ENSSFOG00015026640 Clupeocephala ANCESTRAL SPECIES ENSGT00940000163126.b.b #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000163126.b.b #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000157050.i.a ENSGT00390000010450 ENSGT00940000164804.a ENSGT00940000164492.b ENSGT00940000164492.a.a ENSGT00940000158959.a.b ENSGT00940000162806.b.a ENSGT00390000015368.a.a.c ENSGT00940000157413.h ENSGT00940000158081.o.b ENSGT00940000153593.e.b ENSGT01030000234515.a.b.b.b ENSGT00940000154412.C.c.a ENSGT00390000000051.b ENSGT00940000163126.a.a #22 ENSGT00940000163126.b.b #22 ENSGT00940000158995.b #23 ENSGT00940000154369.g.a ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00950000183086.a.a.b.h.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165.b ENSGT00900000141083.c.a ENSGT00950000182903.a.a.d ENSGT00940000159223.d ENSGT00940000157384.a ENSGT00390000005067.b ENSGT00940000155442.o ENSGT00940000155963.e Cod MODERN SPECIES 21 ENSGMOG00000010240 ENSGMOG00000027213 crtc1a (ENSGMOG00000010220) ENSGMOG00000027994 pik3r2 (ENSGMOG00000010166) ifi30 (ENSGMOG00000010157) ENSGMOG00000000694 ENSGMOG00000000685 ENSGMOG00000000668 ENSGMOG00000024170 ENSGMOG00000018197 ENSGMOG00000010623 ENSGMOG00000027799 ENSGMOG00000028248 ENSGMOG00000031425 ENSGMOG00000009211 #22 ENSGMOG00000009200 #23 slc25a36a (ENSGMOG00000023978) spsb4a (ENSGMOG00000034486) clstn2a (ENSGMOG00000009159) NMNAT3 (ENSGMOG00000007890) rbp1.1 (ENSGMOG00000026517) rbp2b (ENSGMOG00000035830) copb2 (ENSGMOG00000007877) ENSGMOG00000007864 ENSGMOG00000007857 ENSGMOG00000007851 ENSGMOG00000025298 DYNC1I2 (ENSGMOG00000018897) ENSGMOG00000018887 metap1d (ENSGMOG00000018879) Reedfish DUPLICATION Reedfish MODERN SPECIES 3 ENSECRG00000019805 EBI3 (ENSECRG00000019823) yju2 (ENSECRG00000019845) shda (ENSECRG00000019910) fsd1 (ENSECRG00000020501) stap2b (ENSECRG00000020533) mpnd (ENSECRG00000020567) sh3gl1b (ENSECRG00000020585) CHAF1A (ENSECRG00000020620) ubxn6 (ENSECRG00000020639) hdgfl2 (ENSECRG00000020668) plin3 (ENSECRG00000020698) SEMA6B (ENSECRG00000020725) timm44 (ENSECRG00000020763) hnrnpm (ENSECRG00000020813) ENSECRG00000020844 #22 marchf2 (ENSECRG00000020862) #23 rab11bb (ENSECRG00000020927) #22 fam32a (ENSECRG00000020977) ENSECRG00000020997 tpm4a (ENSECRG00000021040) lpl (ENSECRG00000021080) ENSECRG00000021108 ENSECRG00000021134 safb (ENSECRG00000021157) cherp (ENSECRG00000021185) ENSECRG00000021228 ENSECRG00000021258 rad23ab (ENSECRG00000021283) EPS15L1 (ENSECRG00000021345) klf2a (ENSECRG00000021488) Reedfish MODERN SPECIES 3 ccl44 (ENSECRG00000014482) ap1m1 (ENSECRG00000021503) klf2a (ENSECRG00000021488) EPS15L1 (ENSECRG00000021345) rad23ab (ENSECRG00000021283) ENSECRG00000021258 ENSECRG00000021228 cherp (ENSECRG00000021185) safb (ENSECRG00000021157) ENSECRG00000021134 ENSECRG00000021108 lpl (ENSECRG00000021080) tpm4a (ENSECRG00000021040) ENSECRG00000020997 fam32a (ENSECRG00000020977) rab11bb (ENSECRG00000020927) #22 marchf2 (ENSECRG00000020862) #23 ENSECRG00000020844 #22 hnrnpm (ENSECRG00000020813) timm44 (ENSECRG00000020763) SEMA6B (ENSECRG00000020725) plin3 (ENSECRG00000020698) hdgfl2 (ENSECRG00000020668) ubxn6 (ENSECRG00000020639) CHAF1A (ENSECRG00000020620) sh3gl1b (ENSECRG00000020585) mpnd (ENSECRG00000020567) stap2b (ENSECRG00000020533) fsd1 (ENSECRG00000020501) shda (ENSECRG00000019910) yju2 (ENSECRG00000019845) Elephant shark MODERN SPECIES 1694 ENSCMIG00000009715 ENSCMIG00000009713 ENSCMIG00000009712 CTXN1 (ENSCMIG00000009711) timm44 (ENSCMIG00000009682) hnrnpm (ENSCMIG00000009670) ENSCMIG00000009668 marchf2 (ENSCMIG00000009667) #23 rab11bb (ENSCMIG00000009648) #22 lmnb2 (ENSCMIG00000009617) rpl36 (ENSCMIG00000009598) LONP1 (ENSCMIG00000009595) #25 ENSCMIG00000009583 ENSCMIG00000009580 #26 med16 (ENSCMIG00000009559) ENSCMIG00000009551 r3hdm4 (ENSCMIG00000009547) ENSCMIG00000009539 ENSCMIG00000009535 wdr18 (ENSCMIG00000009531) GRIN3B (ENSCMIG00000009494) TMEM259 (ENSCMIG00000009476) ENSCMIG00000009473 ENSCMIG00000009469 Cyclostomata ANCESTRAL SPECIES ENSGT00940000163126 #22 Lamprey MODERN SPECIES 4157 ENSPMAG00000004521 #22