Tetrapoda	ANCESTRAL SPECIES	6	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT00940000170556	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Amniota	ANCESTRAL SPECIES	6	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Mammalia	ANCESTRAL SPECIES	6	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Theria	ANCESTRAL SPECIES	5	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Eutheria	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Glires	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Lagomorpha	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Rabbit	MODERN SPECIES	18	ENSOCUG00000035924 #7	NEB (ENSOCUG00000017458) #8	ARL5A (ENSOCUG00000035346) #9	ENSOCUG00000000144 #10	STAM2 (ENSOCUG00000000344) #11	ENSOCUG00000013216 #12	ENSOCUG00000037766 #13	ENSOCUG00000013239 #14	ENSOCUG00000030282 #15	ARL6IP6 (ENSOCUG00000013257) #16	RPRM (ENSOCUG00000001688) #17	GALNT13 (ENSOCUG00000017645) #18	KCNJ3 (ENSOCUG00000024206) #19	ENSOCUG00000013788 #20	NR4A2 (ENSOCUG00000000784) #21	GPD2 (ENSOCUG00000009764) #22	ENSOCUG00000021063 #23	GALNT5 (ENSOCUG00000009185) #24	ERMN (ENSOCUG00000009198) #25	CYTIP (ENSOCUG00000009200) #26	ACVR1C (ENSOCUG00000009208) #27	ENSOCUG00000032469 #28	ENSOCUG00000039151 #29	ACVR1 (ENSOCUG00000002439) #30	UPP2 (ENSOCUG00000008498) #31	ENSOCUG00000034761 #32	ENSOCUG00000035971 #33	ENSOCUG00000029444 #34	PKP4 (ENSOCUG00000013466) #35	ENSOCUG00000008620 #36	TANC1 (ENSOCUG00000015107) #37
Pika	MODERN SPECIES	393																GPD2 (ENSOPRG00000010713) #22
Rodentia	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.fb.a #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Marmotini	ANCESTRAL SPECIES	2	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.fb.a #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Marmotini_b	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.fb.a #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Arctic ground squirrel	MODERN SPECIES	247															NR4A2 (ENSUPAG00010002498) #21	GPD2 (ENSUPAG00010002450) #22	GALNT5 (ENSUPAG00010002439) #24	ERMN (ENSUPAG00010002433) #25	CYTIP (ENSUPAG00010002402) #26	ACVR1C (ENSUPAG00010002309) #27	ACVR1 (ENSUPAG00010002272) #30	CCDC148 (ENSUPAG00010002234) #34	PKP4 (ENSUPAG00010001863) #35	DAPL1 (ENSUPAG00010001849) #36	TANC1 (ENSUPAG00010001635) #37	WDSUB1 (ENSUPAG00010001603)	BAZ2B (ENSUPAG00010001347)
Squirrel	MODERN SPECIES	69	RBM43 (ENSSTOG00000016311)	NMI (ENSSTOG00000028659)	TNFAIP6 (ENSSTOG00000016314)	RIF1 (ENSSTOG00000020712)	NEB (ENSSTOG00000016315) #8	ARL5A (ENSSTOG00000016326) #9	CACNB4 (ENSSTOG00000016328) #10	STAM2 (ENSSTOG00000025023) #11	FMNL2 (ENSSTOG00000001614) #12	PRPF40A (ENSSTOG00000001642) #14	ARL6IP6 (ENSSTOG00000001658) #16	RPRM (ENSSTOG00000026311) #17	GALNT13 (ENSSTOG00000011628) #18	KCNJ3 (ENSSTOG00000014395) #19	NR4A2 (ENSSTOG00000002966) #21	GPD2 (ENSSTOG00000005221) #22	ENSSTOG00000021734 #24	ERMN (ENSSTOG00000006613) #25	CYTIP (ENSSTOG00000009143) #26	ACVR1C (ENSSTOG00000009159) #27	ACVR1 (ENSSTOG00000004704) #30	UPP2 (ENSSTOG00000030477) #31	CCDC148 (ENSSTOG00000016271) #34	PKP4 (ENSSTOG00000007684) #35	DAPL1 (ENSSTOG00000007725) #36	TANC1 (ENSSTOG00000009738) #37	WDSUB1 (ENSSTOG00000009762)	BAZ2B (ENSSTOG00000009772)	MARCHF7 (ENSSTOG00000024765)	CD302 (ENSSTOG00000030907)	LY75 (ENSSTOG00000015933)
Alpin marmot	MODERN SPECIES	5	RIF1 (ENSMMMG00000021851)	NEB (ENSMMMG00000021921) #8	ENSMMMG00000022061 #9	CACNB4 (ENSMMMG00000022074) #10	STAM2 (ENSMMMG00000022104) #11	ENSMMMG00000022120	FMNL2 (ENSMMMG00000022132) #12	PRPF40A (ENSMMMG00000022291) #14	ARL6IP6 (ENSMMMG00000022320) #16	ENSMMMG00000022335 #18	ENSMMMG00000022338 #18	ENSMMMG00000022342 #18	ENSMMMG00000022354	KCNJ3 (ENSMMMG00000022368) #19	NR4A2 (ENSMMMG00000022388) #21	GPD2 (ENSMMMG00000022395) #22	ENSMMMG00000022423 #24	ENSMMMG00000022427 #24	ERMN (ENSMMMG00000022432) #25	CYTIP (ENSMMMG00000022447) #26	ACVR1C (ENSMMMG00000022458) #27	ACVR1 (ENSMMMG00000022485) #30	UPP2 (ENSMMMG00000022512) #31	CCDC148 (ENSMMMG00000022526) #34	PKP4 (ENSMMMG00000022548) #35	DAPL1 (ENSMMMG00000022578) #36	TANC1 (ENSMMMG00000022589) #37	WDSUB1 (ENSMMMG00000022608)	BAZ2B (ENSMMMG00000022620)	MARCHF7 (ENSMMMG00000022639)	CD302 (ENSMMMG00000022645)
Eurasian red squirrel	MODERN SPECIES	12	RIF1 (ENSSVLG00005003716)	NEB (ENSSVLG00005004118) #8	ENSSVLG00005004729	ENSSVLG00005004741 #9	CACNB4 (ENSSVLG00005005336) #10	ENSSVLG00005007179	STAM2 (ENSSVLG00005007197) #11	FMNL2 (ENSSVLG00005007277) #12	ENSSVLG00005007428	PRPF40A (ENSSVLG00005007429) #14	ENSSVLG00005007524 #16	RPRM (ENSSVLG00005007559) #17	ENSSVLG00005007594 #18	KCNJ3 (ENSSVLG00005007729) #19	NR4A2 (ENSSVLG00005007787) #21	GPD2 (ENSSVLG00005007886) #22	ENSSVLG00005008042 #24	ERMN (ENSSVLG00005008084) #25	CYTIP (ENSSVLG00005008173) #26	ACVR1C (ENSSVLG00005008270) #27	ACVR1 (ENSSVLG00005008490) #30	ENSSVLG00005008520	UPP2 (ENSSVLG00005008546) #31	CCDC148 (ENSSVLG00005008598) #34	PKP4 (ENSSVLG00005008751) #35	ENSSVLG00005008811	DAPL1 (ENSSVLG00005008852) #36	TANC1 (ENSSVLG00005009095) #37	WDSUB1 (ENSSVLG00005010265)	BAZ2B (ENSSVLG00005010334)	MARCHF7 (ENSSVLG00005010418)
Hystricomorpha	ANCESTRAL SPECIES	20	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d.f #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	17	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d.f #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Hystricomorpha_b	ANCESTRAL SPECIES	24															ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d.f #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Long-tailed chinchilla	MODERN SPECIES	156															NR4A2 (ENSCLAG00000003290) #21	GPD2 (ENSCLAG00000002866) #22	GALNT5 (ENSCLAG00000003428) #24	ERMN (ENSCLAG00000003341) #25	CYTIP (ENSCLAG00000003247) #26	ACVR1C (ENSCLAG00000003034) #27	ACVR1 (ENSCLAG00000004342) #30	UPP2 (ENSCLAG00000003919) #31	CCDC148 (ENSCLAG00000003622) #34	PKP4 (ENSCLAG00000005831) #35	DAPL1 (ENSCLAG00000004812) #36	TANC1 (ENSCLAG00000004542) #37	ENSCLAG00000007913	BAZ2B (ENSCLAG00000006190)	ENSCLAG00000009790	MARCHF7 (ENSCLAG00000009318)	CD302 (ENSCLAG00000012904)
Degu	MODERN SPECIES	73											ENSODEG00000014301	ENSODEG00000014644	ENSODEG00000020160	ENSODEG00000014372	NR4A2 (ENSODEG00000014223) #21	GPD2 (ENSODEG00000013945) #22	ENSODEG00000014559	GALNT5 (ENSODEG00000014096) #24	ERMN (ENSODEG00000014133) #25	ENSODEG00000014529 #26	ACVR1C (ENSODEG00000013991) #27	ACVR1 (ENSODEG00000014264) #30	UPP2 (ENSODEG00000014593) #31	CCDC148 (ENSODEG00000014894) #34	ENSODEG00000020204	PKP4 (ENSODEG00000014779) #35	DAPL1 (ENSODEG00000014464) #36	TANC1 (ENSODEG00000014910) #37	WDSUB1 (ENSODEG00000014178)	BAZ2B (ENSODEG00000014127)	ENSODEG00000015125
Guinea pig	MODERN SPECIES	3	NMI (ENSCPOG00000013053)	TNFAIP6 (ENSCPOG00000007974)	ENSCPOG00000038795	RIF1 (ENSCPOG00000037898)	NEB (ENSCPOG00000005161) #8	ARL5A (ENSCPOG00000005209) #9	CACNB4 (ENSCPOG00000026052) #10	STAM2 (ENSCPOG00000002847) #11	FMNL2 (ENSCPOG00000013482) #12	PRPF40A (ENSCPOG00000013494) #14	RPRM (ENSCPOG00000005597) #17	GALNT13 (ENSCPOG00000013115) #18	ENSCPOG00000005051 #19	ENSCPOG00000034740 #19	NR4A2 (ENSCPOG00000008225) #21	GPD2 (ENSCPOG00000000193) #22	GALNT5 (ENSCPOG00000000913) #24	CYTIP (ENSCPOG00000034296) #26	ACVR1C (ENSCPOG00000007111) #27	ACVR1 (ENSCPOG00000008791) #30	UPP2 (ENSCPOG00000003006) #31	CCDC148 (ENSCPOG00000004172) #34	PKP4 (ENSCPOG00000012130) #35	DAPL1 (ENSCPOG00000033811) #36	TANC1 (ENSCPOG00000008679) #37	WDSUB1 (ENSCPOG00000008696)	BAZ2B (ENSCPOG00000015233)	MARCHF7 (ENSCPOG00000003969)	CD302 (ENSCPOG00000003976)	LY75 (ENSCPOG00000008372)	PLA2R1 (ENSCPOG00000008394)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000037717	ENSHGLG00000047580	ENSHGLG00000036357	ARL6IP6 (ENSHGLG00000047268) #16	ENSHGLG00000041758	ENSHGLG00000041977	ENSHGLG00000034456	RPRM (ENSHGLG00000020667) #17	GALNT13 (ENSHGLG00000008663) #18	ENSHGLG00000041709	ENSHGLG00000048169 #19	ENSHGLG00000043622 ##25	ENSHGLG00000032785	ENSHGLG00000005496	ENSHGLG00000004699 #21	ENSHGLG00000004553 #22	ENSHGLG00000035939	ENSHGLG00000025302	GALNT5 (ENSHGLG00000040944) #24	ERMN (ENSHGLG00000044020) #25	CYTIP (ENSHGLG00000049755) #26	ACVR1C (ENSHGLG00000007777) #27	ACVR1 (ENSHGLG00000006379) #30	UPP2 (ENSHGLG00000004451) #31	CCDC148 (ENSHGLG00000004309) #34	ENSHGLG00000007575 #35	ENSHGLG00000004955	ENSHGLG00000009016 #36	ENSHGLG00000048160	TANC1 (ENSHGLG00000014465) #37	WDSUB1 (ENSHGLG00000014132)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000045770	ARHGEF6 (ENSHGLG00000004195)	ENSHGLG00000011055	GPR101 (ENSHGLG00000044397)	ENSHGLG00000033794	ENSHGLG00000041497	ENSHGLG00000010972	ENSHGLG00000046515	ENSHGLG00000040882	ENSHGLG00000007629	ENSHGLG00000033865	ENSHGLG00000034873	ENSHGLG00000034867	F9 (ENSHGLG00000050058)	MCF2 (ENSHGLG00000013161)	ENSHGLG00000009095 #22	ATP11C (ENSHGLG00000007759)	ENSHGLG00000047068	SOX3 (ENSHGLG00000039208)	ENSHGLG00000039059	ENSHGLG00000004407	ENSHGLG00000037583	ENSHGLG00000036529	ENSHGLG00000049672	ENSHGLG00000038876	ENSHGLG00000032750	ENSHGLG00000035566	SLITRK2 (ENSHGLG00000007935)	ENSHGLG00000045634	ENSHGLG00000040472	FMR1 (ENSHGLG00000000576)
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Muroidea	ANCESTRAL SPECIES	34	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Chinese hamster chok1gshd	MODERN SPECIES	188	Rbm43 (ENSCGRG00001011129)	Nmi (ENSCGRG00001000480)	Tnfaip6 (ENSCGRG00001024845)	Rif1 (ENSCGRG00001024589)	Neb (ENSCGRG00001022624) #8	Arl5a (ENSCGRG00001024645) #9	Cacnb4 (ENSCGRG00001023366) #10	Stam2 (ENSCGRG00001023878) #11	Fmnl2 (ENSCGRG00001024179) #12	Prpf40a (ENSCGRG00001022526) #14	Arl6ip6 (ENSCGRG00001021408) #16	Rprm (ENSCGRG00001009462) #17	Galnt13 (ENSCGRG00001004190) #18	Kcnj3 (ENSCGRG00001000982) #19	Nr4a2 (ENSCGRG00001001426) #21	Gpd2 (ENSCGRG00001024452) #22	Galnt5 (ENSCGRG00001004718) #24	Ermn (ENSCGRG00001016956) #25	Cytip (ENSCGRG00001024713) #26	Acvr1c (ENSCGRG00001023713) #27	Acvr1 (ENSCGRG00001023684) #30	Upp2 (ENSCGRG00001011463) #31	Ccdc148 (ENSCGRG00001023650) #34	Pkp4 (ENSCGRG00001024825) #35	ENSCGRG00001008878 #36	Tanc1 (ENSCGRG00001015684) #37	Baz2b (ENSCGRG00001011640)	Marchf7 (ENSCGRG00001024547)	Cd302 (ENSCGRG00001000797)	Ly75 (ENSCGRG00001024055)	Pla2r1 (ENSCGRG00001024467)
Golden Hamster	MODERN SPECIES	633	Rnd3 (ENSMAUG00000011617)	Rbm43 (ENSMAUG00000012908)	Nmi (ENSMAUG00000011421)	Rif1 (ENSMAUG00000013158)	Neb (ENSMAUG00000004953) #8	Arl5a (ENSMAUG00000011769) #9	Cacnb4 (ENSMAUG00000014567) #10	Stam2 (ENSMAUG00000000322) #11	Fmnl2 (ENSMAUG00000013048) #12	Prpf40a (ENSMAUG00000020074) #14	Arl6ip6 (ENSMAUG00000001987) #16	Rprm (ENSMAUG00000018060) #17	Galnt13 (ENSMAUG00000007643) #18	ENSMAUG00000018084 #19	Nr4a2 (ENSMAUG00000009371) #21	Gpd2 (ENSMAUG00000015110) #22	Galnt5 (ENSMAUG00000015690) #24	Ermn (ENSMAUG00000017936) #25	Cytip (ENSMAUG00000018649) #26	Acvr1c (ENSMAUG00000018969) #27	Upp2 (ENSMAUG00000000231) #31	Ccdc148 (ENSMAUG00000000409) #34	Pkp4 (ENSMAUG00000019677) #35	Dapl1 (ENSMAUG00000007222) #36	Tanc1 (ENSMAUG00000016219) #37	Wdsub1 (ENSMAUG00000002168)	ENSMAUG00000007486	ENSMAUG00000008617	Ly75 (ENSMAUG00000015663)	Pla2r1 (ENSMAUG00000002027)	Itgb6 (ENSMAUG00000013668)
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Prairie vole	MODERN SPECIES	12	Rbm43 (ENSMOCG00000007686)	ENSMOCG00000011562	Tnfaip6 (ENSMOCG00000003915)	Rif1 (ENSMOCG00000009381)	Neb (ENSMOCG00000022729) #8	Arl5a (ENSMOCG00000019795) #9	Cacnb4 (ENSMOCG00000022468) #10	Stam2 (ENSMOCG00000003177) #11	Fmnl2 (ENSMOCG00000022812) #12	Prpf40a (ENSMOCG00000009517) #14	Arl6ip6 (ENSMOCG00000016947) #16	Rprm (ENSMOCG00000002172) #17	Galnt13 (ENSMOCG00000014596) #18	Kcnj3 (ENSMOCG00000020988) #19	Nr4a2 (ENSMOCG00000004312) #21	Gpd2 (ENSMOCG00000022538) #22	Galnt5 (ENSMOCG00000018686) #24	Ermn (ENSMOCG00000022625) #25	Cytip (ENSMOCG00000016003) #26	Acvr1c (ENSMOCG00000021159) #27	Acvr1 (ENSMOCG00000014737) #30	Upp2 (ENSMOCG00000013921) #31	Ccdc148 (ENSMOCG00000003566) #34	ENSMOCG00000005550	Pkp4 (ENSMOCG00000015021) #35	Dapl1 (ENSMOCG00000022472) #36	Tanc1 (ENSMOCG00000008681) #37	Wdsub1 (ENSMOCG00000021664)	Baz2b (ENSMOCG00000004160)	Marchf7 (ENSMOCG00000005095)	Cd302 (ENSMOCG00000020178)
Northern American deer mouse	MODERN SPECIES	17	Neb (ENSPEMG00000011241) #8	ENSPEMG00000010335 #9	Cacnb4 (ENSPEMG00000000044) #10	Stam2 (ENSPEMG00000012476) #11	Fmnl2 (ENSPEMG00000021308) #12	Prpf40a (ENSPEMG00000020838) #14	Arl6ip6 (ENSPEMG00000001460) #16	Rprm (ENSPEMG00000014265) #17	ENSPEMG00000013797	Galnt13 (ENSPEMG00000015185) #18	ENSPEMG00000012843	Kcnj3 (ENSPEMG00000015278) #19	ENSPEMG00000027901	Nr4a2 (ENSPEMG00000000011) #21	ENSPEMG00000027857	Gpd2 (ENSPEMG00000020267) #22	Galnt5 (ENSPEMG00000020201) #24	Ermn (ENSPEMG00000026555) #25	Cytip (ENSPEMG00000010824) #26	Acvr1c (ENSPEMG00000008762) #27	Acvr1 (ENSPEMG00000008567) #30	ENSPEMG00000029209	Upp2 (ENSPEMG00000004188) #31	Ccdc148 (ENSPEMG00000016298) #34	Pkp4 (ENSPEMG00000015348) #35	Dapl1 (ENSPEMG00000016737) #36	ENSPEMG00000008774	ENSPEMG00000024402	Tanc1 (ENSPEMG00000006898) #37	Wdsub1 (ENSPEMG00000013163)	Baz2b (ENSPEMG00000011049)
Murinae	ANCESTRAL SPECIES	1	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Mus	ANCESTRAL SPECIES	1	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00860000136335	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Mus_A	ANCESTRAL SPECIES		ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00860000136335	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Mus_B	ANCESTRAL SPECIES	1	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00860000136335	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Mus_C	ANCESTRAL SPECIES		ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00860000136335	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
spretus	MODERN SPECIES	11	Rbm43 (MGP_SPRETEiJ_G0024473)	Nmi (MGP_SPRETEiJ_G0024474)	Tnfaip6 (MGP_SPRETEiJ_G0024475)	Rif1 (MGP_SPRETEiJ_G0024476)	Neb (MGP_SPRETEiJ_G0024477) #8	Arl5a (MGP_SPRETEiJ_G0024478) #9	Cacnb4 (MGP_SPRETEiJ_G0024479) #10	Stam2 (MGP_SPRETEiJ_G0024480) #11	Fmnl2 (MGP_SPRETEiJ_G0024481) #12	Prpf40a (MGP_SPRETEiJ_G0024482) #14	Arl6ip6 (MGP_SPRETEiJ_G0024483) #16	Rprm (MGP_SPRETEiJ_G0024484) #17	Galnt13 (MGP_SPRETEiJ_G0024485) #18	Kcnj3 (MGP_SPRETEiJ_G0024486) #19	Nr4a2 (MGP_SPRETEiJ_G0024487) #21	Gpd2 (MGP_SPRETEiJ_G0024488) #22	Galnt5 (MGP_SPRETEiJ_G0024489) #24	Ermn (MGP_SPRETEiJ_G0024490) #25	Cytip (MGP_SPRETEiJ_G0024491) #26	Acvr1c (MGP_SPRETEiJ_G0024492) #27	Acvr1 (MGP_SPRETEiJ_G0024493) #30	MGP_SPRETEiJ_G0024494	Upp2 (MGP_SPRETEiJ_G0024495) #31	Ccdc148 (MGP_SPRETEiJ_G0024496) #34	MGP_SPRETEiJ_G0024497	Pkp4 (MGP_SPRETEiJ_G0024498) #35	Dapl1 (MGP_SPRETEiJ_G0024499) #36	Tanc1 (MGP_SPRETEiJ_G0024500) #37	Wdsub1 (MGP_SPRETEiJ_G0024501)	Baz2b (MGP_SPRETEiJ_G0024502)	Marchf7 (MGP_SPRETEiJ_G0024503)
Steppe mouse	MODERN SPECIES	2744															Nr4a2 (ENSMSIG00000032191) #21	Gpd2 (ENSMSIG00000032187) #22
Mouse	MODERN SPECIES	11	Rbm43 (ENSMUSG00000036249)	Nmi (ENSMUSG00000026946)	Tnfaip6 (ENSMUSG00000053475)	Rif1 (ENSMUSG00000036202)	Neb (ENSMUSG00000026950) #8	Arl5a (ENSMUSG00000036093) #9	Cacnb4 (ENSMUSG00000017412) #10	Stam2 (ENSMUSG00000055371) #11	Fmnl2 (ENSMUSG00000036053) #12	Prpf40a (ENSMUSG00000061136) #14	Arl6ip6 (ENSMUSG00000026960) #16	Rprm (ENSMUSG00000075334) #17	Galnt13 (ENSMUSG00000060988) #18	Kcnj3 (ENSMUSG00000026824) #19	Nr4a2 (ENSMUSG00000026826) #21	Gpd2 (ENSMUSG00000026827) #22	Galnt5 (ENSMUSG00000026828) #24	Ermn (ENSMUSG00000026830) #25	Cytip (ENSMUSG00000026832) #26	Acvr1c (ENSMUSG00000026834) #27	Acvr1 (ENSMUSG00000026836) #30	Upp2 (ENSMUSG00000026839) #31	Ccdc148 (ENSMUSG00000036641) #34	Pkp4 (ENSMUSG00000026991) #35	Dapl1 (ENSMUSG00000026989) #36	Tanc1 (ENSMUSG00000035168) #37	Wdsub1 (ENSMUSG00000026988)	Baz2b (ENSMUSG00000026987)	Marchf7 (ENSMUSG00000026977)	Cd302 (ENSMUSG00000060703)	Ly75 (ENSMUSG00000026980)
Ryukyu mouse	MODERN SPECIES	11	Rbm43 (MGP_CAROLIEiJ_G0023552)	Nmi (MGP_CAROLIEiJ_G0023553)	Tnfaip6 (MGP_CAROLIEiJ_G0023554)	Rif1 (MGP_CAROLIEiJ_G0023555)	MGP_CAROLIEiJ_G0023556 #8	Arl5a (MGP_CAROLIEiJ_G0023557) #9	Cacnb4 (MGP_CAROLIEiJ_G0023558) #10	Stam2 (MGP_CAROLIEiJ_G0023559) #11	Fmnl2 (MGP_CAROLIEiJ_G0023560) #12	Prpf40a (MGP_CAROLIEiJ_G0023561) #14	Arl6ip6 (MGP_CAROLIEiJ_G0023562) #16	Rprm (MGP_CAROLIEiJ_G0023563) #17	Galnt13 (MGP_CAROLIEiJ_G0023564) #18	Kcnj3 (MGP_CAROLIEiJ_G0023565) #19	Nr4a2 (MGP_CAROLIEiJ_G0023566) #21	Gpd2 (MGP_CAROLIEiJ_G0023567) #22	Galnt5 (MGP_CAROLIEiJ_G0023568) #24	Ermn (MGP_CAROLIEiJ_G0023569) #25	Cytip (MGP_CAROLIEiJ_G0023570) #26	Acvr1c (MGP_CAROLIEiJ_G0023571) #27	Acvr1 (MGP_CAROLIEiJ_G0023572) #30	MGP_CAROLIEiJ_G0023573	Upp2 (MGP_CAROLIEiJ_G0023574) #31	Ccdc148 (MGP_CAROLIEiJ_G0023575) #34	Pkp4 (MGP_CAROLIEiJ_G0023576) #35	Dapl1 (MGP_CAROLIEiJ_G0023577) #36	Tanc1 (MGP_CAROLIEiJ_G0023578) #37	Wdsub1 (MGP_CAROLIEiJ_G0023579)	Baz2b (MGP_CAROLIEiJ_G0023580)	Marchf7 (MGP_CAROLIEiJ_G0023581)	Cd302 (MGP_CAROLIEiJ_G0023582)
Shrew mouse	MODERN SPECIES	16	Rbm43 (MGP_PahariEiJ_G0025003)	Nmi (MGP_PahariEiJ_G0025004)	Tnfaip6 (MGP_PahariEiJ_G0025005)	Rif1 (MGP_PahariEiJ_G0025006)	MGP_PahariEiJ_G0025007 #8	Arl5a (MGP_PahariEiJ_G0025008) #9	Cacnb4 (MGP_PahariEiJ_G0025009) #10	Stam2 (MGP_PahariEiJ_G0025010) #11	Fmnl2 (MGP_PahariEiJ_G0025011) #12	Prpf40a (MGP_PahariEiJ_G0025012) #14	Arl6ip6 (MGP_PahariEiJ_G0025013) #16	Rprm (MGP_PahariEiJ_G0025014) #17	Galnt13 (MGP_PahariEiJ_G0025015) #18	Kcnj3 (MGP_PahariEiJ_G0025016) #19	Nr4a2 (MGP_PahariEiJ_G0025017) #21	Gpd2 (MGP_PahariEiJ_G0025018) #22	Galnt5 (MGP_PahariEiJ_G0025019) #24	Ermn (MGP_PahariEiJ_G0025020) #25	Cytip (MGP_PahariEiJ_G0025021) #26	Acvr1c (MGP_PahariEiJ_G0025022) #27	Acvr1 (MGP_PahariEiJ_G0025023) #30	MGP_PahariEiJ_G0025024	Upp2 (MGP_PahariEiJ_G0025025) #31	Ccdc148 (MGP_PahariEiJ_G0025026) #34	Pkp4 (MGP_PahariEiJ_G0025027) #35	Dapl1 (MGP_PahariEiJ_G0025028) #36	Tanc1 (MGP_PahariEiJ_G0025029) #37	Wdsub1 (MGP_PahariEiJ_G0025030)	Baz2b (MGP_PahariEiJ_G0025031)	Marchf7 (MGP_PahariEiJ_G0025032)	Cd302 (MGP_PahariEiJ_G0025033)
Rat	MODERN SPECIES	13	AABR07052125.1 (ENSRNOG00000006829)	Arl5a (ENSRNOG00000006839) #9	Cacnb4 (ENSRNOG00000007666) #10	Stam2 (ENSRNOG00000027447) #11	Ndufa2-ps1 (ENSRNOG00000064291)	Dppa5 (ENSRNOG00000029793)	Fmnl2 (ENSRNOG00000055567) #12	Prpf40a (ENSRNOG00000004864) #14	Arl6ip6 (ENSRNOG00000005074) #16	Micos10-ps2 (ENSRNOG00000065751)	Rprm (ENSRNOG00000005109) #17	Galnt13 (ENSRNOG00000005335) #18	ENSRNOG00000065543	Kcnj3 (ENSRNOG00000005369) #19	Nr4a2 (ENSRNOG00000005600) #21	Gpd2 (ENSRNOG00000033824) #22	Galnt5 (ENSRNOG00000004645) #24	Ermn (ENSRNOG00000021472) #25	Cytip (ENSRNOG00000004772) #26	Acvr1c (ENSRNOG00000004828) #27	Acvr1 (ENSRNOG00000005033) #30	Gapdh-ps1 (ENSRNOG00000071205)	Upp2 (ENSRNOG00000005341) #31	Ccdc148 (ENSRNOG00000057740) #34	Pkp4 (ENSRNOG00000005504) #35	Dapl1 (ENSRNOG00000005743) #36	ENSRNOG00000064239	Tanc1 (ENSRNOG00000025394) #37	Wdsub1 (ENSRNOG00000005990)	Baz2b (ENSRNOG00000056984)	LOC100361645 (ENSRNOG00000031951) ##32
Upper Galilee mountains blind mole rat	MODERN SPECIES	1170															Nr4a2 (ENSNGAG00000001664) #21	Gpd2 (ENSNGAG00000006795) #22	Galnt5 (ENSNGAG00000011264) #24	Ermn (ENSNGAG00000016602) #25	Cytip (ENSNGAG00000017542) #26	Acvr1c (ENSNGAG00000020794) #27	Acvr1 (ENSNGAG00000003562) #30
Lesser Egyptian jerboa	MODERN SPECIES	46	Neb (ENSJJAG00000012568) #8	ENSJJAG00000015512 #9	Cacnb4 (ENSJJAG00000016900) #10	Stam2 (ENSJJAG00000009817) #11	Fmnl2 (ENSJJAG00000021375) #12	Prpf40a (ENSJJAG00000004636) #14	Arl6ip6 (ENSJJAG00000019266) #16	ENSJJAG00000023428	Rprm (ENSJJAG00000012518) #17	ENSJJAG00000002819	Galnt13 (ENSJJAG00000010483) #18	Kcnj3 (ENSJJAG00000007165) #19	ENSJJAG00000022824	Nr4a2 (ENSJJAG00000018362) #21	ENSJJAG00000022660	ENSJJAG00000018801 #22	Galnt5 (ENSJJAG00000004437) #24	Ermn (ENSJJAG00000017224) #25	Cytip (ENSJJAG00000015679) #26	Acvr1c (ENSJJAG00000000840) #27	Acvr1 (ENSJJAG00000021757) #30	Upp2 (ENSJJAG00000019359) #31	Ccdc148 (ENSJJAG00000012594) #34	Pkp4 (ENSJJAG00000010175) #35	Dapl1 (ENSJJAG00000008272) #36	Tanc1 (ENSJJAG00000015166) #37	Wdsub1 (ENSJJAG00000017632)	Baz2b (ENSJJAG00000021770)	ENSJJAG00000001578	Marchf7 (ENSJJAG00000019998)	Cd302 (ENSJJAG00000020650)
Kangaroo rat	MODERN SPECIES	324	Nmi (ENSDORG00000024973)	ENSDORG00000028394	Tnfaip6 (ENSDORG00000016446)	Neb (ENSDORG00000004258) #8	ENSDORG00000003082 #9	Cacnb4 (ENSDORG00000007926) #10	Stam2 (ENSDORG00000007927) #11	Fmnl2 (ENSDORG00000029929) #12	Prpf40a (ENSDORG00000006757) #14	Arl6ip6 (ENSDORG00000006761) #16	ENSDORG00000028417	Rprm (ENSDORG00000003407) #17	Galnt13 (ENSDORG00000011932) #18	Kcnj3 (ENSDORG00000005402) #19	Nr4a2 (ENSDORG00000007987) #21	Gpd2 (ENSDORG00000004451) #22	Galnt5 (ENSDORG00000003518) #24	Ermn (ENSDORG00000003519) #25	ENSDORG00000023938	Cytip (ENSDORG00000015983) #26	Acvr1c (ENSDORG00000010112) #27	Acvr1 (ENSDORG00000013457) #30	Upp2 (ENSDORG00000005683) #31	Ccdc148 (ENSDORG00000008724) #34	Pkp4 (ENSDORG00000007017) #35	Dapl1 (ENSDORG00000009147) #36	Tanc1 (ENSDORG00000010962) #37	Wdsub1 (ENSDORG00000005593)	Baz2b (ENSDORG00000005595)	Marchf7 (ENSDORG00000006639)	Cd302 (ENSDORG00000006643)
Tree shrew	MODERN SPECIES	596																GPD2 (ENSTBEG00000014623) #22
Primates	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES																	ENSGT00390000001718.i #22
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00950000183077.a.a.a.a.b	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT00390000015797.d	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.i #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000154191.i.a.s	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000165460	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Cebidae	ANCESTRAL SPECIES	11	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00950000183077.a.a.a.a.b	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT00390000015797.d	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.i #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000154191.i.a.s	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000165460	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Marmoset	MODERN SPECIES	18	CACNB4 (ENSCJAG00000003326) #10	STAM2 (ENSCJAG00000044417) #11	ENSCJAG00000082252	ENSCJAG00000075153	ENSCJAG00000056419	FMNL2 (ENSCJAG00000015629) #12	PRPF40A (ENSCJAG00000015541) #14	ARL6IP6 (ENSCJAG00000061546) #16	RPRM (ENSCJAG00000046500) #17	ENSCJAG00000074891	GALNT13 (ENSCJAG00000015503) #18	ENSCJAG00000046815	KCNJ3 (ENSCJAG00000015490) #19	ENSCJAG00000078948	NR4A2 (ENSCJAG00000015464) #21	ENSCJAG00000015452 #22	GALNT5 (ENSCJAG00000015426) #24	ERMN (ENSCJAG00000077957) #25	CYTIP (ENSCJAG00000053299) #26	ACVR1C (ENSCJAG00000015385) #27	ACVR1 (ENSCJAG00000015359) #30	ENSCJAG00000062119	CCDC148 (ENSCJAG00000015325) #34	PKP4 (ENSCJAG00000015236) #35	DAPL1 (ENSCJAG00000039319) #36	ENSCJAG00000051811	TANC1 (ENSCJAG00000015159) #37	WDSUB1 (ENSCJAG00000015117)	BAZ2B (ENSCJAG00000015052)	MARCHF7 (ENSCJAG00000015023)	CD302 (ENSCJAG00000047546)
Cebidae_a	ANCESTRAL SPECIES	27	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00950000183077.a.a.a.a.b	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT00390000015797.d	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.i #22	ENSGT00940000154966.l	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000154191.i.a.s	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000165460	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Bolivian squirrel monkey	MODERN SPECIES	46	RIF1 (ENSSBOG00000029530)	NEB (ENSSBOG00000031622) #8	ARL5A (ENSSBOG00000034323) #9	CACNB4 (ENSSBOG00000025206) #10	ENSSBOG00000023639	ENSSBOG00000027242 #11	ENSSBOG00000023807	FMNL2 (ENSSBOG00000027176) #12	PRPF40A (ENSSBOG00000015435) #14	ARL6IP6 (ENSSBOG00000029584) #16	RPRM (ENSSBOG00000009917) #17	GALNT13 (ENSSBOG00000024917) #18	ENSSBOG00000030750	KCNJ3 (ENSSBOG00000023474) #19	NR4A2 (ENSSBOG00000021402) #21	ENSSBOG00000027281 #22	ENSSBOG00000023257	GALNT5 (ENSSBOG00000020422) #24	ERMN (ENSSBOG00000031955) #25	ENSSBOG00000028587	CYTIP (ENSSBOG00000025520) #26	ENSSBOG00000035700	ACVR1C (ENSSBOG00000030313) #27	ACVR1 (ENSSBOG00000025226) #30	ENSSBOG00000005244	UPP2 (ENSSBOG00000025379) #31	ENSSBOG00000018918	CCDC148 (ENSSBOG00000028768) #34	PKP4 (ENSSBOG00000035588) #35	ENSSBOG00000020626	TANC1 (ENSSBOG00000035294) #37
Capuchin	MODERN SPECIES	10															NR4A2 (ENSCCAG00000028864) #21	ENSCCAG00000013735 #22	ENSCCAG00000034104	GALNT5 (ENSCCAG00000017721) #24	ERMN (ENSCCAG00000018480) #25	CYTIP (ENSCCAG00000031950) #26	ACVR1C (ENSCCAG00000034982) #27	ACVR1 (ENSCCAG00000021519) #30	ENSCCAG00000029581	UPP2 (ENSCCAG00000020932) #31	CCDC148 (ENSCCAG00000034404) #34	PKP4 (ENSCCAG00000027888) #35	ENSCCAG00000034852	TANC1 (ENSCCAG00000034191) #37	WDSUB1 (ENSCCAG00000026210)	BAZ2B (ENSCCAG00000029234)	MARCHF7 (ENSCCAG00000032294)
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000161929	ENSGT00940000162525	ENSGT00910000144582	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163677.a.b.a.a.a.b.a	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.b	ENSGT00940000163218	ENSGT00940000160411
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000161929	ENSGT00940000162525	ENSGT00910000144582	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.b	ENSGT00940000163218	ENSGT00940000160411
Hominidae	ANCESTRAL SPECIES		ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000161929	ENSGT00940000162525	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000017871	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.b	ENSGT00940000163218	ENSGT00940000160411
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000162525	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000017871.b	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000007200.l	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.b	ENSGT00940000163218	ENSGT00910000148367
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000162525	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000017871.b	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000007200.l	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.b	ENSGT00940000163218	ENSGT00940000160411
Pan	ANCESTRAL SPECIES	9	ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000162525	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000017871.b	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000007200.l	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00910000145073	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.b	ENSGT00940000163218	ENSGT00940000160411
Bonobo	MODERN SPECIES	10	ZNF264 (ENSPPAG00000040571)	DUXA (ENSPPAG00000039466)	ZIM3 (ENSPPAG00000034573)	PEG3 (ENSPPAG00000023992)	ZNF835 (ENSPPAG00000011355)	SMIM17 (ENSPPAG00000010024)	ENSPPAG00000041219	ZNF470 (ENSPPAG00000040887)	ZFP28 (ENSPPAG00000040191)	ZNF471 (ENSPPAG00000002078)	ENSPPAG00000027170	ZNF667 (ENSPPAG00000041319)	ZNF582 (ENSPPAG00000029277)	ENSPPAG00000037084	ENSPPAG00000019180	ENSPPAG00000033883 #22	EDDM13 (ENSPPAG00000028512)	ZSCAN5A (ENSPPAG00000035437)	ZSCAN5C (ENSPPAG00000027548)	ZSCAN5B (ENSPPAG00000009603)	GALP (ENSPPAG00000034903)	ZNF444 (ENSPPAG00000038804)	ENSPPAG00000004792	NLRP5 (ENSPPAG00000031725)	NLRP8 (ENSPPAG00000029544)	NLRP13 (ENSPPAG00000041403)	NLRP4 (ENSPPAG00000033000)	NLRP11 (ENSPPAG00000017134)	ENSPPAG00000035519	NLRP9 (ENSPPAG00000042520)	ENSPPAG00000040935
Chimpanzee	MODERN SPECIES	10	DUXA (ENSPTRG00000028871)	ZIM3 (ENSPTRG00000028872)	PEG3 (ENSPTRG00000023511)	ZNF835 (ENSPTRG00000024363)	SMIM17 (ENSPTRG00000044769)	ZNF71 (ENSPTRG00000022542)	ZNF470 (ENSPTRG00000051121)	ZFP28 (ENSPTRG00000023421)	ZNF471 (ENSPTRG00000028873)	ENSPTRG00000047670	ZNF667 (ENSPTRG00000011536)	ZNF583 (ENSPTRG00000023310)	ZNF582 (ENSPTRG00000011539)	ENSPTRG00000050066	ENSPTRG00000050381	ENSPTRG00000045738 #22	EDDM13 (ENSPTRG00000050856)	ZSCAN5A (ENSPTRG00000050956)	ZSCAN5C (ENSPTRG00000043651)	ZSCAN5B (ENSPTRG00000024093)	GALP (ENSPTRG00000022571)	ZNF444 (ENSPTRG00000011535)	ENSPTRG00000049425	NLRP5 (ENSPTRG00000011533)	NLRP8 (ENSPTRG00000011532)	NLRP13 (ENSPTRG00000011531)	NLRP4 (ENSPTRG00000011530)	NLRP11 (ENSPTRG00000011529)	NLRP9 (ENSPTRG00000011526)	EPN1 (ENSPTRG00000011524)	U2AF2 (ENSPTRG00000011523)
Gorilla	MODERN SPECIES	10	ZNF264 (ENSGGOG00000006173)	DUXA (ENSGGOG00000005650)	ZIM3 (ENSGGOG00000008206)	PEG3 (ENSGGOG00000005093)	SMIM17 (ENSGGOG00000042710)	ZNF71 (ENSGGOG00000014884)	ZNF470 (ENSGGOG00000037494)	ZFP28 (ENSGGOG00000011352)	ENSGGOG00000009780	ENSGGOG00000043593	ENSGGOG00000025600	ZNF667 (ENSGGOG00000000337)	ZNF583 (ENSGGOG00000014854)	ZNF582 (ENSGGOG00000003541)	ENSGGOG00000022308	ENSGGOG00000040203 #22	EDDM13 (ENSGGOG00000043046)	ZSCAN5A (ENSGGOG00000024785)	ZSCAN5C (ENSGGOG00000014089)	ENSGGOG00000027356	ENSGGOG00000014084	GALP (ENSGGOG00000014081)	ZNF444 (ENSGGOG00000027831)	ZNF787 (ENSGGOG00000026899)	NLRP5 (ENSGGOG00000004662)	NLRP8 (ENSGGOG00000038077)	NLRP13 (ENSGGOG00000008273)	NLRP4 (ENSGGOG00000016786)	NLRP11 (ENSGGOG00000016443)	ENSGGOG00000025780	NLRP9 (ENSGGOG00000023343)
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000161929	ENSGT00940000162525	ENSGT00910000144582	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163677.a.b.a.a.a.b.a	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.a	ENSGT00940000163220.b.g	ENSGT00940000163218
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000161929	ENSGT00940000162525	ENSGT00910000144582	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163677.a.b.a.a.a.b.a	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.a	ENSGT00940000163220.b.g	ENSGT00940000163218
Cercopithecinae_a	ANCESTRAL SPECIES	23	ENSGT00940000161619	ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000162525	ENSGT00940000163677.a.b.a.a.a.b.b	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00910000148414	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.a	ENSGT00940000163220.b.g
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000161929	ENSGT00940000162525	ENSGT00940000163677.a.b.a.a.a.b.b	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00910000148414	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000164597	ENSGT00390000016349	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.a	ENSGT00940000163220.b.g	ENSGT00940000163218
Pig-tailed macaque	MODERN SPECIES	143	ENSMNEG00000038947	AURKC (ENSMNEG00000039984)	ZNF264 (ENSMNEG00000030964)	DUXA (ENSMNEG00000034185)	ZIM3 (ENSMNEG00000040897)	PEG3 (ENSMNEG00000036930)	SMIM17 (ENSMNEG00000039727)	ZNF71 (ENSMNEG00000026705)	ZNF470 (ENSMNEG00000038442)	ZFP28 (ENSMNEG00000044816)	ZNF471 (ENSMNEG00000037021)	ZNF667 (ENSMNEG00000044228)	ZNF583 (ENSMNEG00000030981)	ZNF582 (ENSMNEG00000028263)	ENSMNEG00000032373	ENSMNEG00000032854 #22	ENSMNEG00000001348	EDDM13 (ENSMNEG00000039729)	ZSCAN5A (ENSMNEG00000041679)	ZSCAN5C (ENSMNEG00000037381)	ZSCAN5B (ENSMNEG00000039908)	GALP (ENSMNEG00000012763)	ZNF444 (ENSMNEG00000028729)	ZNF787 (ENSMNEG00000040695)	NLRP5 (ENSMNEG00000036479)	NLRP8 (ENSMNEG00000035245)	NLRP13 (ENSMNEG00000041268)	NLRP4 (ENSMNEG00000044197)	NLRP11 (ENSMNEG00000029737)	ENSMNEG00000033972	ENSMNEG00000034268
Cercopithecinae_b	ANCESTRAL SPECIES	39	ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000162525	ENSGT00940000163677.a.b.a.a.a.b.b	ENSGT00940000165608	ENSGT00490000044430	ENSGT00940000163677.a.b.a.a.a.b.a	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00910000148414	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT01100000267023	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.a
Cercopithecinae_d	ANCESTRAL SPECIES	43	ENSGT00950000182890.D.c.b.a.b.a.b.x	ENSGT00940000159953.B.a.a	ENSGT00940000161619	ENSGT00940000159953.B.a.b	ENSGT00940000163365	ENSGT00940000164284	ENSGT00940000162525	ENSGT00490000044430	ENSGT00940000163774	ENSGT00940000163087	ENSGT00940000162376	ENSGT00940000161954.f	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00390000001718.i #22	ENSGT00910000148414	ENSGT00510000055233	ENSGT00940000163230.a.b	ENSGT00940000163230.a.a	ENSGT00940000164597	ENSGT00390000016349	ENSGT01100000267023	ENSGT00940000162893	ENSGT00940000163064	ENSGT00940000162898	ENSGT00940000163909	ENSGT00940000163591	ENSGT00940000162284	ENSGT00940000163635	ENSGT00940000163220.a
Sooty mangabey	MODERN SPECIES	607	ENSCATG00000038493	ENSCATG00000035888	PPP2R5E (ENSCATG00000019906)	GPHB5 (ENSCATG00000045284)	RHOJ (ENSCATG00000035763)	ENSCATG00000030810	KCNH5 (ENSCATG00000042607)	ZNF71 (ENSCATG00000034845)	ZNF470 (ENSCATG00000042389)	ZFP28 (ENSCATG00000044000)	ZNF471 (ENSCATG00000040262)	ZNF667 (ENSCATG00000030847)	ZNF583 (ENSCATG00000033066)	ZNF582 (ENSCATG00000036892)	ENSCATG00000034610	ENSCATG00000042409 #22	ENSCATG00000039719	EDDM13 (ENSCATG00000037344)	ZSCAN5A (ENSCATG00000039708)	ZSCAN5C (ENSCATG00000040802)	ZSCAN5B (ENSCATG00000038324)	ENSCATG00000039723	ZNF444 (ENSCATG00000035089)	ZNF787 (ENSCATG00000034101)	NLRP5 (ENSCATG00000013095)	NLRP8 (ENSCATG00000037501)	NLRP13 (ENSCATG00000032693)	NLRP4 (ENSCATG00000024950)	NLRP11 (ENSCATG00000004890)	ENSCATG00000044514	ENSCATG00000029889
Drill	MODERN SPECIES	1225							ENSMLEG00000040715	SMIM17 (ENSMLEG00000032239)	ZNF71 (ENSMLEG00000007723)	ZNF470 (ENSMLEG00000034609)	ZFP28 (ENSMLEG00000041554)	ZNF471 (ENSMLEG00000044463)	ZNF667 (ENSMLEG00000036255)	ZNF583 (ENSMLEG00000007582)	ZNF582 (ENSMLEG00000030585)	ENSMLEG00000035380 #22	EDDM13 (ENSMLEG00000042817)	ZSCAN5A (ENSMLEG00000043375)	ZSCAN5C (ENSMLEG00000032490)	ZSCAN5B (ENSMLEG00000010543)	GALP (ENSMLEG00000039804)	ENSMLEG00000006662	NLRP5 (ENSMLEG00000026428)	NLRP8 (ENSMLEG00000036613)	NLRP13 (ENSMLEG00000037124)	NLRP4 (ENSMLEG00000038409)	NLRP11 (ENSMLEG00000044289)	ENSMLEG00000018794	ENSMLEG00000033753	NLRP9 (ENSMLEG00000036273)	EPN1 (ENSMLEG00000026771)
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Hominidae	ANCESTRAL SPECIES	17	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v.f #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Gorilla	MODERN SPECIES	15	NMI (ENSGGOG00000013518)	TNFAIP6 (ENSGGOG00000022498)	RIF1 (ENSGGOG00000040178)	NEB (ENSGGOG00000016489) #8	ENSGGOG00000002066 #9	CACNB4 (ENSGGOG00000038672) #10	STAM2 (ENSGGOG00000011441) #11	FMNL2 (ENSGGOG00000008600) #12	ENSGGOG00000028462	PRPF40A (ENSGGOG00000015592) #14	ARL6IP6 (ENSGGOG00000015604) #16	RPRM (ENSGGOG00000002162) #17	GALNT13 (ENSGGOG00000034959) #18	KCNJ3 (ENSGGOG00000022873) #19	NR4A2 (ENSGGOG00000011182) #21	GPD2 (ENSGGOG00000022735) #22	ENSGGOG00000027932	GALNT5 (ENSGGOG00000002475) #24	ERMN (ENSGGOG00000009944) #25	CYTIP (ENSGGOG00000006478) #26	ACVR1C (ENSGGOG00000039092) #27	ACVR1 (ENSGGOG00000002934) #30	UPP2 (ENSGGOG00000003425) #31	CCDC148 (ENSGGOG00000007731) #34	PKP4 (ENSGGOG00000001679) #35	ENSGGOG00000002893	ENSGGOG00000027595	TANC1 (ENSGGOG00000009465) #37	WDSUB1 (ENSGGOG00000015737)	BAZ2B (ENSGGOG00000016720)	ENSGGOG00000024112
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v.f #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Human	MODERN SPECIES	11	RBM43 (ENSG00000184898)	NMI (ENSG00000123609)	TNFAIP6 (ENSG00000123610)	RIF1 (ENSG00000080345)	NEB (ENSG00000183091) #8	ARL5A (ENSG00000162980) #9	CACNB4 (ENSG00000182389) #10	STAM2 (ENSG00000115145) #11	FMNL2 (ENSG00000157827) #12	PRPF40A (ENSG00000196504) #14	ARL6IP6 (ENSG00000177917) #16	RPRM (ENSG00000177519) #17	GALNT13 (ENSG00000144278) #18	KCNJ3 (ENSG00000162989) #19	NR4A2 (ENSG00000153234) #21	GPD2 (ENSG00000115159) #22	GALNT5 (ENSG00000136542) #24	ERMN (ENSG00000136541) #25	CYTIP (ENSG00000115165) #26	ACVR1C (ENSG00000123612) #27	ACVR1 (ENSG00000115170) #30	UPP2 (ENSG00000007001) #31	CCDC148 (ENSG00000153237) #34	PKP4 (ENSG00000144283) #35	DAPL1 (ENSG00000163331) #36	TANC1 (ENSG00000115183) #37	WDSUB1 (ENSG00000196151)	BAZ2B (ENSG00000123636)	MARCHF7 (ENSG00000136536)	CD302 (ENSG00000241399)	LY75-CD302 (ENSG00000248672)
Pan	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v.f #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00730000111097.f.a.b.b.b	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000156425	ENSGT00940000154296.jb.a.f.b	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359
Bonobo	MODERN SPECIES	15	NMI (ENSPPAG00000034174)	TNFAIP6 (ENSPPAG00000029874)	RIF1 (ENSPPAG00000023754)	ENSPPAG00000043206 #8	ARL5A (ENSPPAG00000033494) #9	CACNB4 (ENSPPAG00000028311) #10	STAM2 (ENSPPAG00000037568) #11	FMNL2 (ENSPPAG00000038903) #12	ENSPPAG00000009946	PRPF40A (ENSPPAG00000040033) #14	ARL6IP6 (ENSPPAG00000026309) #16	RPRM (ENSPPAG00000002667) #17	GALNT13 (ENSPPAG00000035152) #18	ENSPPAG00000014453 #19	NR4A2 (ENSPPAG00000031796) #21	GPD2 (ENSPPAG00000030269) #22	ENSPPAG00000039863	GALNT5 (ENSPPAG00000041176) #24	ERMN (ENSPPAG00000032661) #25	ENSPPAG00000038520	CYTIP (ENSPPAG00000032175) #26	ACVR1C (ENSPPAG00000035901) #27	ACVR1 (ENSPPAG00000037042) #30	UPP2 (ENSPPAG00000036723) #31	ENSPPAG00000030423 #34	PKP4 (ENSPPAG00000036834) #35	ENSPPAG00000036574	ENSPPAG00000031566	TANC1 (ENSPPAG00000043775) #37	WDSUB1 (ENSPPAG00000043849)	BAZ2B (ENSPPAG00000043827)
Chimpanzee	MODERN SPECIES	15	TNFAIP6 (ENSPTRG00000012533)	RIF1 (ENSPTRG00000012534)	NEB (ENSPTRG00000012536) #8	ENSPTRG00000039444	ARL5A (ENSPTRG00000012538) #9	CACNB4 (ENSPTRG00000047916) #10	STAM2 (ENSPTRG00000012540) #11	FMNL2 (ENSPTRG00000012541) #12	ENSPTRG00000048776	PRPF40A (ENSPTRG00000012543) #14	ARL6IP6 (ENSPTRG00000012544) #16	RPRM (ENSPTRG00000012545) #17	GALNT13 (ENSPTRG00000012546) #18	KCNJ3 (ENSPTRG00000012547) #19	NR4A2 (ENSPTRG00000012548) #21	GPD2 (ENSPTRG00000012549) #22	ENSPTRG00000043600	GALNT5 (ENSPTRG00000012550) #24	ERMN (ENSPTRG00000012551) #25	ENSPTRG00000050997	CYTIP (ENSPTRG00000012553) #26	ACVR1C (ENSPTRG00000012554) #27	ACVR1 (ENSPTRG00000012555) #30	UPP2 (ENSPTRG00000012556) #31	CCDC148 (ENSPTRG00000012557) #34	PKP4 (ENSPTRG00000012559) #35	DAPL1 (ENSPTRG00000012560)	ENSPTRG00000040409	TANC1 (ENSPTRG00000012561) #37	WDSUB1 (ENSPTRG00000012562)	BAZ2B (ENSPTRG00000012563)
Orangutan	MODERN SPECIES	15	RIF1 (ENSPPYG00000012846)	NEB (ENSPPYG00000012847) #8	ENSPPYG00000032033	ARL5A (ENSPPYG00000012848) #9	CACNB4 (ENSPPYG00000012849) #10	STAM2 (ENSPPYG00000012850) #11	FMNL2 (ENSPPYG00000012851) #12	ENSPPYG00000012852	PRPF40A (ENSPPYG00000012854) #14	ARL6IP6 (ENSPPYG00000012855) #16	RPRM (ENSPPYG00000012856) #17	GALNT13 (ENSPPYG00000012857) #18	ENSPPYG00000033294 #19	ENSPPYG00000032817	NR4A2 (ENSPPYG00000012859) #21	GPD2 (ENSPPYG00000041025) #22	GALNT5 (ENSPPYG00000012861) #24	ERMN (ENSPPYG00000012862) #25	CYTIP (ENSPPYG00000037528) #26	ACVR1C (ENSPPYG00000038725) #27	ACVR1 (ENSPPYG00000012865) #30	UPP2 (ENSPPYG00000012866) #31	CCDC148 (ENSPPYG00000029824) #34	PKP4 (ENSPPYG00000012867) #35	ENSPPYG00000033059	TANC1 (ENSPPYG00000012870) #37	BAZ2B (ENSPPYG00000012872)	MARCHF7 (ENSPPYG00000012873)	LY75 (ENSPPYG00000012874)	PLA2R1 (ENSPPYG00000012876)	ITGB6 (ENSPPYG00000012877)
Gibbon	MODERN SPECIES	7	RIF1 (ENSNLEG00000010955)	NEB (ENSNLEG00000011170) #8	ARL5A (ENSNLEG00000011191) #9	ENSNLEG00000030371	CACNB4 (ENSNLEG00000029444) #10	STAM2 (ENSNLEG00000011293) #11	ENSNLEG00000029701	ENSNLEG00000019196	FMNL2 (ENSNLEG00000026694) #12	PRPF40A (ENSNLEG00000011324) #14	ARL6IP6 (ENSNLEG00000011387) #16	RPRM (ENSNLEG00000019197) #17	GALNT13 (ENSNLEG00000011400) #18	KCNJ3 (ENSNLEG00000011437) #19	NR4A2 (ENSNLEG00000000629) #21	GPD2 (ENSNLEG00000000655) #22	ENSNLEG00000000733	GALNT5 (ENSNLEG00000000734) #24	ENSNLEG00000028994	ERMN (ENSNLEG00000027710) #25	CYTIP (ENSNLEG00000000772) #26	ACVR1C (ENSNLEG00000000817) #27	ACVR1 (ENSNLEG00000000837) #30	UPP2 (ENSNLEG00000000869) #31	CCDC148 (ENSNLEG00000000871) #34	PKP4 (ENSNLEG00000000892) #35	ENSNLEG00000000968	TANC1 (ENSNLEG00000000979) #37	WDSUB1 (ENSNLEG00000001031)	ENSNLEG00000035318	BAZ2B (ENSNLEG00000001067)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00910000147393	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b	ENSGT00530000063836.a
Vervet Monkey	MODERN SPECIES	1	RBM43 (ENSCSAG00000016105)	NMI (ENSCSAG00000016102)	TNFAIP6 (ENSCSAG00000016095)	RIF1 (ENSCSAG00000016089)	NEB (ENSCSAG00000016065) #8	CACNB4 (ENSCSAG00000016028) #10	STAM2 (ENSCSAG00000016021) #11	ENSCSAG00000016011 #12	PRPF40A (ENSCSAG00000016002) #14	ARL6IP6 (ENSCSAG00000015990) #16	ENSCSAG00000015984	RPRM (ENSCSAG00000018646) #17	GALNT13 (ENSCSAG00000015977) #18	KCNJ3 (ENSCSAG00000015970) #19	NR4A2 (ENSCSAG00000015964) #21	GPD2 (ENSCSAG00000015958) #22	GALNT5 (ENSCSAG00000015950) #24	ERMN (ENSCSAG00000015935) #25	CYTIP (ENSCSAG00000015933) #26	ACVR1C (ENSCSAG00000015930) #27	ACVR1 (ENSCSAG00000015925) #30	UPP2 (ENSCSAG00000015921) #31	CCDC148 (ENSCSAG00000015915) #34	ENSCSAG00000018647	PKP4 (ENSCSAG00000015907) #35	DAPL1 (ENSCSAG00000015900) #36	TANC1 (ENSCSAG00000015889) #37	WDSUB1 (ENSCSAG00000015849)	BAZ2B (ENSCSAG00000015843)	MARCHF7 (ENSCSAG00000015835)	CD302 (ENSCSAG00000015829)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00910000147369	ENSGT00940000154748.C.bb.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000165460	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000164980.d	ENSGT00940000155359
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00910000147369	ENSGT00940000154748.C.bb.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000166727.b	ENSGT00940000155179.d	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00580000082664.b.a.a	ENSGT00940000165460	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01100000263539.b.a.a.a.b.b.a.b.b.a.a.a.a.a.a	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00940000153375.lb.qb.a.a.a.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.d	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.a.b	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00580000082664.b.a.a	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359
Rhesus	MODERN SPECIES	3	TNFAIP6 (ENSMMUG00000010927)	RIF1 (ENSMMUG00000008611)	ARL5A (ENSMMUG00000010521) #9	CACNB4 (ENSMMUG00000010526) #10	STAM2 (ENSMMUG00000010527) #11	FMNL2 (ENSMMUG00000031452) #12	PRPF40A (ENSMMUG00000010812) #14	ARL6IP6 (ENSMMUG00000062827) #16	ENSMMUG00000056430	RPRM (ENSMMUG00000061390) #17	GALNT13 (ENSMMUG00000055468) #18	ENSMMUG00000061400	KCNJ3 (ENSMMUG00000007096) #19	ENSMMUG00000058984	NR4A2 (ENSMMUG00000011607) #21	GPD2 (ENSMMUG00000004897) #22	ENSMMUG00000017716	GALNT5 (ENSMMUG00000017717) #24	ERMN (ENSMMUG00000038413) #25	CYTIP (ENSMMUG00000014176) #26	ACVR1C (ENSMMUG00000003707) #27	ENSMMUG00000058947	ACVR1 (ENSMMUG00000018497) #30	ENSMMUG00000058416	UPP2 (ENSMMUG00000011636) #31	ENSMMUG00000064768	ENSMMUG00000039873	CCDC148 (ENSMMUG00000011637) #34	PKP4 (ENSMMUG00000011638) #35	ENSMMUG00000006443	DAPL1 (ENSMMUG00000052818) #36
Crab-eating macaque	MODERN SPECIES	3	RIF1 (ENSMFAG00000032233)	NEB (ENSMFAG00000000188) #8	ENSMFAG00000056377 #9	CACNB4 (ENSMFAG00000044631) #10	STAM2 (ENSMFAG00000039480) #11	FMNL2 (ENSMFAG00000000995) #12	PRPF40A (ENSMFAG00000038480) #14	ARL6IP6 (ENSMFAG00000046021) #16	RPRM (ENSMFAG00000023756) #17	ENSMFAG00000065123	GALNT13 (ENSMFAG00000043213) #18	ENSMFAG00000050325	ENSMFAG00000043008 #19	ENSMFAG00000048164	NR4A2 (ENSMFAG00000036654) #21	GPD2 (ENSMFAG00000031606) #22	ENSMFAG00000059673	GALNT5 (ENSMFAG00000036566) #24	ERMN (ENSMFAG00000045944) #25	CYTIP (ENSMFAG00000043861) #26	ACVR1C (ENSMFAG00000042281) #27	ACVR1 (ENSMFAG00000042305) #30	ENSMFAG00000058914	UPP2 (ENSMFAG00000003209) #31	CCDC148 (ENSMFAG00000038269) #34	PKP4 (ENSMFAG00000008546) #35	ENSMFAG00000043045	ENSMFAG00000061795	DAPL1 (ENSMFAG00000029280) #36	TANC1 (ENSMFAG00000042358) #37	WDSUB1 (ENSMFAG00000023412)
Pig-tailed macaque	MODERN SPECIES	200											GALNT13 (ENSMNEG00000038018) #18	KCNJ3 (ENSMNEG00000042423) #19	ENSMNEG00000012049	ENSMNEG00000030470	NR4A2 (ENSMNEG00000030690) #21	GPD2 (ENSMNEG00000043830) #22	ENSMNEG00000003004	ENSMNEG00000039725	GALNT5 (ENSMNEG00000033880) #24	ERMN (ENSMNEG00000033854) #25	CYTIP (ENSMNEG00000030676) #26	ACVR1C (ENSMNEG00000008795) #27	ACVR1 (ENSMNEG00000037142) #30	UPP2 (ENSMNEG00000040493) #31	CCDC148 (ENSMNEG00000035200) #34	PKP4 (ENSMNEG00000033225) #35	ENSMNEG00000039564	ENSMNEG00000034113	TANC1 (ENSMNEG00000041870) #37	WDSUB1 (ENSMNEG00000043913)	ENSMNEG00000044017
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00910000147369	ENSGT00940000154748.C.bb.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000165460	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000164980.d	ENSGT00940000155359	ENSGT00950000183119.a.e.a.d.a.b
Olive baboon	MODERN SPECIES	1	TNFAIP6 (ENSPANG00000021874)	RIF1 (ENSPANG00000008525)	NEB (ENSPANG00000005536) #8	ENSPANG00000009772 #9	CACNB4 (ENSPANG00000008398) #10	STAM2 (ENSPANG00000025044) #11	FMNL2 (ENSPANG00000008524) #12	PRPF40A (ENSPANG00000022095) #14	ARL6IP6 (ENSPANG00000018067) #16	RPRM (ENSPANG00000016888) #17	GALNT13 (ENSPANG00000016223) #18	ENSPANG00000046537	ENSPANG00000021079 #19	ENSPANG00000039703	NR4A2 (ENSPANG00000017851) #21	GPD2 (ENSPANG00000022223) #22	ENSPANG00000050199	ENSPANG00000045575	GALNT5 (ENSPANG00000015847) #24	ERMN (ENSPANG00000011571) #25	CYTIP (ENSPANG00000010255) #26	ACVR1C (ENSPANG00000025000) #27	ENSPANG00000039495	ACVR1 (ENSPANG00000005535) #30	ENSPANG00000043340	UPP2 (ENSPANG00000008397) #31	CCDC148 (ENSPANG00000009771) #34	PKP4 (ENSPANG00000023664) #35	ENSPANG00000045005	ENSPANG00000043147	ENSPANG00000030865
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714.v #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00910000147369	ENSGT00940000154748.C.bb.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00390000001958.t.a.f	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000165460	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000164980.d	ENSGT00940000155359
Sooty mangabey	MODERN SPECIES	480	RIF1 (ENSCATG00000033353)	NEB (ENSCATG00000031600) #8	ARL5A (ENSCATG00000029667) #9	CACNB4 (ENSCATG00000035449) #10	STAM2 (ENSCATG00000045298) #11	FMNL2 (ENSCATG00000030795) #12	ENSCATG00000039643	PRPF40A (ENSCATG00000043798) #14	ARL6IP6 (ENSCATG00000037038) #16	RPRM (ENSCATG00000009508) #17	GALNT13 (ENSCATG00000041414) #18	KCNJ3 (ENSCATG00000015555) #19	ENSCATG00000012230	ENSCATG00000039232	NR4A2 (ENSCATG00000031198) #21	GPD2 (ENSCATG00000027595) #22	ENSCATG00000041805	GALNT5 (ENSCATG00000043386) #24	ERMN (ENSCATG00000035512) #25	CYTIP (ENSCATG00000019139) #26	ACVR1C (ENSCATG00000006009) #27	ACVR1 (ENSCATG00000043568) #30	UPP2 (ENSCATG00000039609) #31	ENSCATG00000009759	CCDC148 (ENSCATG00000042205) #34	PKP4 (ENSCATG00000042780) #35	ENSCATG00000044407	TANC1 (ENSCATG00000036732) #37	WDSUB1 (ENSCATG00000031432)	BAZ2B (ENSCATG00000041093)	ENSCATG00000043533
Drill	MODERN SPECIES	161												KCNJ3 (ENSMLEG00000036640) #19	ENSMLEG00000002842	ENSMLEG00000041999	NR4A2 (ENSMLEG00000042988) #21	GPD2 (ENSMLEG00000037751) #22	ENSMLEG00000033420	GALNT5 (ENSMLEG00000041941) #24	ERMN (ENSMLEG00000037650) #25	CYTIP (ENSMLEG00000009650) #26	ACVR1C (ENSMLEG00000034616) #27	ACVR1 (ENSMLEG00000037343) #30	ENSMLEG00000041556	UPP2 (ENSMLEG00000006823) #31	CCDC148 (ENSMLEG00000040644) #34	PKP4 (ENSMLEG00000041827) #35	ENSMLEG00000042520	ENSMLEG00000027046	TANC1 (ENSMLEG00000040628) #37	WDSUB1 (ENSMLEG00000037762)	ENSMLEG00000027873
Rhinopithecus	ANCESTRAL SPECIES	621															ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718.j #22	ENSGT00940000166727.b	ENSGT00940000155179.c.b	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25
Black snub-nosed monkey	MODERN SPECIES	852															NR4A2 (ENSRBIG00000027636) #21	GPD2 (ENSRBIG00000031802) #22	ENSRBIG00000035393	GALNT5 (ENSRBIG00000032659) #24	ERMN (ENSRBIG00000041755) #25
Golden snub-nosed monkey	MODERN SPECIES	2830															NR4A2 (ENSRROG00000034749) #21	GPD2 (ENSRROG00000044379) #22	ENSRROG00000005532
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000001718.j #22
Mas night monkey	MODERN SPECIES	1025										ENSANAG00000018049 #17	GALNT13 (ENSANAG00000034184) #18	ENSANAG00000024363	ENSANAG00000032096	KCNJ3 (ENSANAG00000024065) #19	NR4A2 (ENSANAG00000033869) #21	GPD2 (ENSANAG00000029065) #22	ENSANAG00000024064	GALNT5 (ENSANAG00000031318) #24	ERMN (ENSANAG00000024435) #25	CYTIP (ENSANAG00000021557) #26	ACVR1C (ENSANAG00000020309) #27	ENSANAG00000036181	ACVR1 (ENSANAG00000037191) #30	UPP2 (ENSANAG00000014254) #31	CCDC148 (ENSANAG00000030337) #34	PKP4 (ENSANAG00000030283) #35	ENSANAG00000027356	TANC1 (ENSANAG00000028931) #37	WDSUB1 (ENSANAG00000024850)	ENSANAG00000019367	BAZ2B (ENSANAG00000031484)
Tarsier	MODERN SPECIES	2916																GPD2 (ENSTSYG00000009366) #22
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Lemuriformes_a	ANCESTRAL SPECIES	81	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00390000008673.c.b	ENSGT00620000089259	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000165460	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Coquerels sifaka	MODERN SPECIES	207													ENSPCOG00000019736 #18	KCNJ3 (ENSPCOG00000023450) #19	NR4A2 (ENSPCOG00000023481) #21	GPD2 (ENSPCOG00000024425) #22	GALNT5 (ENSPCOG00000027803) #24	ERMN (ENSPCOG00000018793) #25	CYTIP (ENSPCOG00000015398) #26	ACVR1C (ENSPCOG00000023691) #27	ACVR1 (ENSPCOG00000020193) #30	ENSPCOG00000017879	UPP2 (ENSPCOG00000026361) #31	CCDC148 (ENSPCOG00000022812) #34	PKP4 (ENSPCOG00000027516) #35	DAPL1 (ENSPCOG00000023845) #36
Mouse lemur	MODERN SPECIES	30	RBM43 (ENSMICG00000002078)	NMI (ENSMICG00000046560)	TNFAIP6 (ENSMICG00000045439)	RIF1 (ENSMICG00000046127)	NEB (ENSMICG00000007063) #8	ENSMICG00000015788 #9	CACNB4 (ENSMICG00000005867) #10	STAM2 (ENSMICG00000009382) #11	FMNL2 (ENSMICG00000017132) #12	PRPF40A (ENSMICG00000017146) #14	ARL6IP6 (ENSMICG00000042407) #16	RPRM (ENSMICG00000038767) #17	GALNT13 (ENSMICG00000013917) #18	KCNJ3 (ENSMICG00000005207) #19	NR4A2 (ENSMICG00000012076) #21	GPD2 (ENSMICG00000002816) #22	GALNT5 (ENSMICG00000008562) #24	ERMN (ENSMICG00000043032) #25	CYTIP (ENSMICG00000033074) #26	ACVR1C (ENSMICG00000008579) #27	ACVR1 (ENSMICG00000042942) #30	UPP2 (ENSMICG00000004835) #31	CCDC148 (ENSMICG00000004839) #34	PKP4 (ENSMICG00000016813) #35	DAPL1 (ENSMICG00000044514) #36	TANC1 (ENSMICG00000010481) #37	WDSUB1 (ENSMICG00000010495)	ENSMICG00000033517	BAZ2B (ENSMICG00000013967)	ENSMICG00000027936	CD302 (ENSMICG00000042240)
Bushbaby	MODERN SPECIES	213									FMNL2 (ENSOGAG00000014332) #12	PRPF40A (ENSOGAG00000014343) #14	ENSOGAG00000025497	RPRM (ENSOGAG00000000247) #17	GALNT13 (ENSOGAG00000016208) #18	KCNJ3 (ENSOGAG00000005272) #19	NR4A2 (ENSOGAG00000009989) #21	GPD2 (ENSOGAG00000005169) #22	GALNT5 (ENSOGAG00000016594) #24	ERMN (ENSOGAG00000016598) #25	CYTIP (ENSOGAG00000016600) #26	ACVR1C (ENSOGAG00000011965) #27	ACVR1 (ENSOGAG00000011662) #30	UPP2 (ENSOGAG00000016439) #31	ENSOGAG00000034257	CCDC148 (ENSOGAG00000016443) #34	ENSOGAG00000027642	PKP4 (ENSOGAG00000016455) #35	DAPL1 (ENSOGAG00000016465) #36	TANC1 (ENSOGAG00000005652) #37	WDSUB1 (ENSOGAG00000012344)	BAZ2B (ENSOGAG00000012349)	MARCHF7 (ENSOGAG00000008675)
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT01090000260806	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.a	ENSGT01090000260806	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Cetacea	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987.m #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00390000009819.a.b.a.a.a.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000157201	ENSGT00390000008496.j.b.a	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987.m #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000182878.b.a.c.a.a.b.o.a.a.a.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00390000009819.a.b.a.a.a.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000157201	ENSGT00390000008496.j.b.a	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987.m #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000182878.b.a.c.a.a.b.o.a.a.a.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00520000055616.a.n.a	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Beluga whale	MODERN SPECIES	84	TNFAIP6 (ENSDLEG00000018296)	RIF1 (ENSDLEG00000018312)	NEB (ENSDLEG00000018861) #8	ARL5A (ENSDLEG00000021351) #9	CACNB4 (ENSDLEG00000021384) #10	STAM2 (ENSDLEG00000021549) #11	FMNL2 (ENSDLEG00000021565) #12	PRPF40A (ENSDLEG00000021630) #14	ARL6IP6 (ENSDLEG00000021640) #16	ENSDLEG00000021642	RPRM (ENSDLEG00000021644) #17	GALNT13 (ENSDLEG00000021650) #18	KCNJ3 (ENSDLEG00000021658) #19	ENSDLEG00000021665	NR4A2 (ENSDLEG00000021668) #21	GPD2 (ENSDLEG00000021674) #22	GALNT5 (ENSDLEG00000021685) #24	ERMN (ENSDLEG00000021690) #25	CYTIP (ENSDLEG00000021694) #26	ACVR1C (ENSDLEG00000021698) #27	ACVR1 (ENSDLEG00000021704) #30	UPP2 (ENSDLEG00000021711) #31	CCDC148 (ENSDLEG00000021715) #34	PKP4 (ENSDLEG00000021722) #35	ENSDLEG00000021727	DAPL1 (ENSDLEG00000021730) #36	TANC1 (ENSDLEG00000021758) #37	WDSUB1 (ENSDLEG00000021808)	BAZ2B (ENSDLEG00000021825)	ENSDLEG00000021834	ENSDLEG00000021836
Narwhal	MODERN SPECIES	302	TNFAIP6 (ENSMMNG00015010527)	ENSMMNG00015010504	RIF1 (ENSMMNG00015010377)	NEB (ENSMMNG00015010017) #8	ARL5A (ENSMMNG00015009864) #9	CACNB4 (ENSMMNG00015009337) #10	STAM2 (ENSMMNG00015009058) #11	FMNL2 (ENSMMNG00015009039) #12	PRPF40A (ENSMMNG00015008999) #14	ARL6IP6 (ENSMMNG00015008975) #16	RPRM (ENSMMNG00015008967) #17	GALNT13 (ENSMMNG00015008929) #18	KCNJ3 (ENSMMNG00015008897) #19	ENSMMNG00015008871	NR4A2 (ENSMMNG00015008859) #21	GPD2 (ENSMMNG00015008838) #22	ENSMMNG00015008821	GALNT5 (ENSMMNG00015008803) #24	ERMN (ENSMMNG00015008792) #25	CYTIP (ENSMMNG00015008775) #26	ACVR1C (ENSMMNG00015008729) #27	ACVR1 (ENSMMNG00015008667) #30	UPP2 (ENSMMNG00015008638) #31	ENSMMNG00015008615	CCDC148 (ENSMMNG00015008584) #34	PKP4 (ENSMMNG00015008535) #35	ENSMMNG00015008509	DAPL1 (ENSMMNG00015008500) #36	TANC1 (ENSMMNG00015008409) #37	WDSUB1 (ENSMMNG00015008343)	BAZ2B (ENSMMNG00015008164)
Vaquita	MODERN SPECIES	18	ENSPSNG00000022185	RIF1 (ENSPSNG00000022170)	NEB (ENSPSNG00000012803) #8	ARL5A (ENSPSNG00000009575) #9	CACNB4 (ENSPSNG00000007389) #10	STAM2 (ENSPSNG00000006220) #11	FMNL2 (ENSPSNG00000006149) #12	PRPF40A (ENSPSNG00000006077) #14	ENSPSNG00000006041 #16	RPRM (ENSPSNG00000006016) #17	GALNT13 (ENSPSNG00000005799) #18	ENSPSNG00000005737 #19	ENSPSNG00000005693	ENSPSNG00000005659	NR4A2 (ENSPSNG00000005588) #21	GPD2 (ENSPSNG00000005483) #22	GALNT5 (ENSPSNG00000005387) #24	ERMN (ENSPSNG00000005348) #25	CYTIP (ENSPSNG00000005288) #26	ACVR1C (ENSPSNG00000005156) #27	ACVR1 (ENSPSNG00000005073) #30	UPP2 (ENSPSNG00000005044) #31	CCDC148 (ENSPSNG00000004963) #34	PKP4 (ENSPSNG00000004809) #35	DAPL1 (ENSPSNG00000004726) #36	TANC1 (ENSPSNG00000004634) #37	WDSUB1 (ENSPSNG00000004541)	ENSPSNG00000004495	ENSPSNG00000004480	BAZ2B (ENSPSNG00000004205)	MARCHF7 (ENSPSNG00000004066)
Dolphin	MODERN SPECIES	1128															NR4A2 (ENSTTRG00000005740) #21	GPD2 (ENSTTRG00000005741) #22
Sperm whale	MODERN SPECIES	11	TNFAIP6 (ENSPCTG00005001643)	RIF1 (ENSPCTG00005001703)	NEB (ENSPCTG00005002027) #8	ARL5A (ENSPCTG00005002661) #9	CACNB4 (ENSPCTG00005003013) #10	STAM2 (ENSPCTG00005007069) #11	FMNL2 (ENSPCTG00005007168) #12	PRPF40A (ENSPCTG00005007224) #14	ARL6IP6 (ENSPCTG00005007339) #16	RPRM (ENSPCTG00005007360) #17	GALNT13 (ENSPCTG00005007385) #18	ENSPCTG00005007408 #19	ENSPCTG00005007421	ENSPCTG00005007470	NR4A2 (ENSPCTG00005007489) #21	GPD2 (ENSPCTG00005007599) #22	GALNT5 (ENSPCTG00005007657) #24	ERMN (ENSPCTG00005007685) #25	CYTIP (ENSPCTG00005007718) #26	ACVR1C (ENSPCTG00005007770) #27	ENSPCTG00005008058	ACVR1 (ENSPCTG00005008074) #30	UPP2 (ENSPCTG00005008111) #31	CCDC148 (ENSPCTG00005008138) #34	PKP4 (ENSPCTG00005008256) #35	DAPL1 (ENSPCTG00005008316) #36	TANC1 (ENSPCTG00005008361) #37	WDSUB1 (ENSPCTG00005008448)	BAZ2B (ENSPCTG00005008599)	MARCH7 (ENSPCTG00005008848)	CD302 (ENSPCTG00005008956)
Blue whale	MODERN SPECIES	18	TNFAIP6 (ENSBMSG00010002386)	ENSBMSG00010002399	RIF1 (ENSBMSG00010002436)	NEB (ENSBMSG00010002643) #8	ARL5A (ENSBMSG00010002880) #9	CACNB4 (ENSBMSG00010003258) #10	STAM2 (ENSBMSG00010005180) #11	FMNL2 (ENSBMSG00010005238) #12	PRPF40A (ENSBMSG00010005288) #14	ARL6IP6 (ENSBMSG00010005306) #16	RPRM (ENSBMSG00010005320) #17	GALNT13 (ENSBMSG00010005342) #18	ENSBMSG00010005366	ENSBMSG00010005381 #19	NR4A2 (ENSBMSG00010005418) #21	GPD2 (ENSBMSG00010005434) #22	ENSBMSG00010005448	GALNT5 (ENSBMSG00010005462) #24	ERMN (ENSBMSG00010005478) #25	CYTIP (ENSBMSG00010005488) #26	ACVR1C (ENSBMSG00010005515) #27	ACVR1 (ENSBMSG00010005582) #30	UPP2 (ENSBMSG00010005599) #31	CCDC148 (ENSBMSG00010005632) #34	PKP4 (ENSBMSG00010005675) #35	DAPL1 (ENSBMSG00010005696) #36	TANC1 (ENSBMSG00010005741) #37	ENSBMSG00010011216	WDSUB1 (ENSBMSG00010011260)	ENSBMSG00010011285	ENSBMSG00010011302
Pecora	ANCESTRAL SPECIES	24	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000160209.e	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Yarkand deer	MODERN SPECIES	26	RIF1 (ENSCHYG00000025435)	NEB (ENSCHYG00000024952) #8	ARL5A (ENSCHYG00000024878) #9	CACNB4 (ENSCHYG00000023861) #10	STAM2 (ENSCHYG00000023731) #11	ENSCHYG00000023717	FMNL2 (ENSCHYG00000023162) #12	PRPF40A (ENSCHYG00000022725) #14	ARL6IP6 (ENSCHYG00000022617) #16	ENSCHYG00000022588	RPRM (ENSCHYG00000022575) #17	ENSCHYG00000022544	GALNT13 (ENSCHYG00000022223) #18	KCNJ3 (ENSCHYG00000022137) #19	NR4A2 (ENSCHYG00000021915) #21	GPD2 (ENSCHYG00000021621) #22	GALNT5 (ENSCHYG00000021379) #24	ERMN (ENSCHYG00000021340) #25	CYTIP (ENSCHYG00000021107) #26	ACVR1C (ENSCHYG00000020862) #27	ENSCHYG00000020838	ACVR1 (ENSCHYG00000020727) #30	UPP2 (ENSCHYG00000020465) #31	CCDC148 (ENSCHYG00000020004) #34	PKP4 (ENSCHYG00000019352) #35	DAPL1 (ENSCHYG00000019166) #36	TANC1 (ENSCHYG00000018314) #37	WDSUB1 (ENSCHYG00000018014)	BAZ2B (ENSCHYG00000017313)	ENSCHYG00000017244	MARCHF7 (ENSCHYG00000016859)
Percora_a	ANCESTRAL SPECIES	5	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000160209.e	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Bovidae	ANCESTRAL SPECIES	8	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000160209.e	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Caprinae	ANCESTRAL SPECIES	5	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT00940000171318	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Rambouillet Sheep	MODERN SPECIES	11	NMI (ENSOARG00020024663)	TNFAIP6 (ENSOARG00020024645)	RIF1 (ENSOARG00020024396)	NEB (ENSOARG00020024247) #8	ARL5A (ENSOARG00020024180) #9	CACNB4 (ENSOARG00020023560) #10	STAM2 (ENSOARG00020023418) #11	ENSOARG00020023393	FMNL2 (ENSOARG00020023016) #12	PRPF40A (ENSOARG00020022598) #14	ARL6IP6 (ENSOARG00020022563) #16	GALNT13 (ENSOARG00020022232) #18	ENSOARG00020022186	KCNJ3 (ENSOARG00020022128) #19	NR4A2 (ENSOARG00020022011) #21	GPD2 (ENSOARG00020021873) #22	ERMN (ENSOARG00020021747) #25	CYTIP (ENSOARG00020021649) #26	ACVR1C (ENSOARG00020021468) #27	ACVR1 (ENSOARG00020021241) #30	UPP2 (ENSOARG00020021088) #31	CCDC148 (ENSOARG00020020890) #34	PKP4 (ENSOARG00020020474) #35	DAPL1 (ENSOARG00020020413) #36	TANC1 (ENSOARG00020019416) #37	WDSUB1 (ENSOARG00020019026)	BAZ2B (ENSOARG00020018501)	MARCH7 (ENSOARG00020018026)	CD302 (ENSOARG00020017815)	LY75 (ENSOARG00020017401)	PLA2R1 (ENSOARG00020016908)
Goat	MODERN SPECIES	11	ARL5A (ENSCHIG00000025329) #9	CACNB4 (ENSCHIG00000013367) #10	ENSCHIG00000022060	STAM2 (ENSCHIG00000020598) #11	ENSCHIG00000010047	FMNL2 (ENSCHIG00000026934) #12	PRPF40A (ENSCHIG00000011660) #14	ARL6IP6 (ENSCHIG00000013866) #16	RPRM (ENSCHIG00000005339) #17	GALNT13 (ENSCHIG00000022466) #18	ENSCHIG00000024495	ENSCHIG00000017562	KCNJ3 (ENSCHIG00000018841) #19	ENSCHIG00000009224	NR4A2 (ENSCHIG00000012843) #21	GPD2 (ENSCHIG00000018054) #22	GALNT5 (ENSCHIG00000001864) #24	ERMN (ENSCHIG00000016766) #25	CYTIP (ENSCHIG00000018333) #26	ACVR1C (ENSCHIG00000013118) #27	ACVR1 (ENSCHIG00000022652) #30	UPP2 (ENSCHIG00000017869) #31	CCDC148 (ENSCHIG00000022642) #34	PKP4 (ENSCHIG00000018303) #35	ENSCHIG00000002234	DAPL1 (ENSCHIG00000023463) #36	TANC1 (ENSCHIG00000026445) #37	WDSUB1 (ENSCHIG00000009513)	ENSCHIG00000017676	ENSCHIG00000022217	ENSCHIG00000021712
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00390000018085.a.b.b	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000160209.e	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Bos	ANCESTRAL SPECIES	6	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00390000018085.a.b.b	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000007818.e.b.b	ENSGT00390000010523.c.b #17	ENSGT00940000160209.e	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000155602.i.a	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b.f #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00390000018085.a.b.b	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000007818.e.b.b	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000155602.i.a	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b.f #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a
Wild yak	MODERN SPECIES	1906															NR4A2 (ENSBMUG00000023402) #21	GPD2 (ENSBMUG00000023381) #22	ENSBMUG00000023326	GALNT5 (ENSBMUG00000023319) #24	ERMN (ENSBMUG00000023310) #25	CYTIP (ENSBMUG00000023301) #26	ACVR1C (ENSBMUG00000023288) #27	ACVR1 (ENSBMUG00000023223) #30	UPP2 (ENSBMUG00000023165) #31
Domestic yak	MODERN SPECIES	11	ENSBGRG00000008336	ARL5A (ENSBGRG00000008374) #9	CACNB4 (ENSBGRG00000008687) #10	STAM2 (ENSBGRG00000015223) #11	FMNL2 (ENSBGRG00000015350) #12	PRPF40A (ENSBGRG00000015929) #14	ARL6IP6 (ENSBGRG00000016671) #16	ENSBGRG00000016778	ENSBGRG00000007210	RPRM (ENSBGRG00000007262) #17	GALNT13 (ENSBGRG00000007349) #18	ENSBGRG00000007820	ENSBGRG00000007847	KCNJ3 (ENSBGRG00000007869) #19	NR4A2 (ENSBGRG00000007951) #21	GPD2 (ENSBGRG00000008160) #22	ENSBGRG00000008596	GALNT5 (ENSBGRG00000008625) #24	ERMN (ENSBGRG00000008771) #25	CYTIP (ENSBGRG00000008859) #26	ACVR1C (ENSBGRG00000009051) #27	ACVR1 (ENSBGRG00000009529) #30	UPP2 (ENSBGRG00000009647) #31	CCDC148 (ENSBGRG00000009770) #34	PKP4 (ENSBGRG00000010064) #35	ENSBGRG00000010385	TANC1 (ENSBGRG00000010534) #37	WDSUB1 (ENSBGRG00000010639)	BAZ2B (ENSBGRG00000010962)	ENSBGRG00000011593	MARCHF7 (ENSBGRG00000011679)
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.l #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000007818.e.b.b	ENSGT00390000010523.c.b #17	ENSGT00940000160209.e	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000155602.i.a	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b.f #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00950000182878.b.b.k.a.a	ENSGT00530000063836.a
Cow	MODERN SPECIES	11	RIF1 (ENSBTAG00000021020)	NEB (ENSBTAG00000006907) #8	ARL5A (ENSBTAG00000002293) #9	CACNB4 (ENSBTAG00000002297) #10	STAM2 (ENSBTAG00000001887) #11	FMNL2 (ENSBTAG00000026851) #12	PRPF40A (ENSBTAG00000048151) #14	ENSBTAG00000047365	ARL6IP6 (ENSBTAG00000001435) #16	ENSBTAG00000033143	RPRM (ENSBTAG00000021526) #17	ENSBTAG00000054139	GALNT13 (ENSBTAG00000005562) #18	KCNJ3 (ENSBTAG00000006159) #19	NR4A2 (ENSBTAG00000003650) #21	GPD2 (ENSBTAG00000009770) #22	ENSBTAG00000054211	GALNT5 (ENSBTAG00000017376) #24	ERMN (ENSBTAG00000012912) #25	CYTIP (ENSBTAG00000008329) #26	ACVR1C (ENSBTAG00000019337) #27	ACVR1 (ENSBTAG00000011909) #30	UPP2 (ENSBTAG00000012801) #31	CCDC148 (ENSBTAG00000004267) #34	ENSBTAG00000049997	PKP4 (ENSBTAG00000013773) #35	DAPL1 (ENSBTAG00000032481) #36	TANC1 (ENSBTAG00000004177) #37	WDSUB1 (ENSBTAG00000004184)	BAZ2B (ENSBTAG00000020654)	ENSBTAG00000054190
Hybrid Bos Indicus	MODERN SPECIES	11	RIF1 (ENSBIXG00005018091)	NEB (ENSBIXG00005018305) #8	ARL5A (ENSBIXG00005002986) #9	CACNB4 (ENSBIXG00005003080) #10	STAM2 (ENSBIXG00005019037) #11	FMNL2 (ENSBIXG00005019262) #12	PRPF40A (ENSBIXG00005005862) #14	ARL6IP6 (ENSBIXG00005003165) #16	ENSBIXG00005019449	RPRM (ENSBIXG00005019467) #17	GALNT13 (ENSBIXG00005019576) #18	ENSBIXG00005019614	ENSBIXG00005006035	KCNJ3 (ENSBIXG00005019661) #19	NR4A2 (ENSBIXG00005019759) #21	GPD2 (ENSBIXG00005019923) #22	ENSBIXG00005019967	GALNT5 (ENSBIXG00005019996) #24	ERMN (ENSBIXG00005020022) #25	CYTIP (ENSBIXG00005020041) #26	ACVR1C (ENSBIXG00005020094) #27	ACVR1 (ENSBIXG00005020163) #30	UPP2 (ENSBIXG00005003353) #31	CCDC148 (ENSBIXG00005003408) #34	PKP4 (ENSBIXG00005020435) #35	DAPL1 (ENSBIXG00005007153) #36	TANC1 (ENSBIXG00005020592) #37	WDSUB1 (ENSBIXG00005020681)	ENSBIXG00005020720	BAZ2B (ENSBIXG00005020764)	MARCHF7 (ENSBIXG00005003543)
American bison	MODERN SPECIES	3062	ARL5A (ENSBBBG00000014197) #9	CACNB4 (ENSBBBG00000014165) #10	STAM2 (ENSBBBG00000013190) #11	ENSBBBG00000007404	ENSBBBG00000002660 #12	PRPF40A (ENSBBBG00000013168) #14	ARL6IP6 (ENSBBBG00000013147) #16	ENSBBBG00000013139	ENSBBBG00000002646	RPRM (ENSBBBG00000013133) #17	GALNT13 (ENSBBBG00000013119) #18	ENSBBBG00000013097	ENSBBBG00000002628	ENSBBBG00000001689 #19	NR4A2 (ENSBBBG00000002625) #21	GPD2 (ENSBBBG00000013051) #22	GALNT5 (ENSBBBG00000012983) #24	ERMN (ENSBBBG00000012974) #25	CYTIP (ENSBBBG00000012958) #26	ACVR1C (ENSBBBG00000001698) #27
Siberian musk deer	MODERN SPECIES	346	FMNL2 (ENSMMSG00000005210) #12	PRPF40A (ENSMMSG00000004797) #14	ARL6IP6 (ENSMMSG00000004675) #16	RPRM (ENSMMSG00000004641) #17	GALNT13 (ENSMMSG00000004530) #18	ENSMMSG00000004501	ENSMMSG00000004482	KCNJ3 (ENSMMSG00000004451) #19	ENSMMSG00000004429	ENSMMSG00000004407	ENSMMSG00000004390	ENSMMSG00000004382	ENSMMSG00000004345	ENSMMSG00000024261	NR4A2 (ENSMMSG00000024259) #21	GPD2 (ENSMMSG00000024256) #22	ENSMMSG00000024254	GALNT5 (ENSMMSG00000024250) #24	ERMN (ENSMMSG00000024248) #25	CYTIP (ENSMMSG00000024245) #26	ACVR1C (ENSMMSG00000024240) #27	ACVR1 (ENSMMSG00000024225) #30	UPP2 (ENSMMSG00000024217) #31	CCDC148 (ENSMMSG00000024199) #34	PKP4 (ENSMMSG00000024173) #35	ENSMMSG00000024171	DAPL1 (ENSMMSG00000024170) #36	TANC1 (ENSMMSG00000024160) #37	WDSUB1 (ENSMMSG00000024154)	BAZ2B (ENSMMSG00000024126)	ENSMMSG00000024107
Camelidae	ANCESTRAL SPECIES	16	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b.k.a #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Alpaca	MODERN SPECIES	3667																GPD2 (ENSVPAG00000008498) #22
Arabian camel	MODERN SPECIES	31	ENSCDRG00005000095 #9	CACNB4 (ENSCDRG00005000236) #10	STAM2 (ENSCDRG00005000826) #11	ENSCDRG00005000883 #12	ENSCDRG00005000923 #12	PRPF40A (ENSCDRG00005000977) #14	ARL6IP6 (ENSCDRG00005001080) #16	ENSCDRG00005001088	RPRM (ENSCDRG00005001096) #17	GALNT13 (ENSCDRG00005001122) #18	ENSCDRG00005001156	KCNJ3 (ENSCDRG00005001176) #19	ENSCDRG00005001195	ENSCDRG00005001216	NR4A2 (ENSCDRG00005001248) #21	GPD2 (ENSCDRG00005001281) #22	GALNT5 (ENSCDRG00005001377) #24	ERMN (ENSCDRG00005001397) #25	CYTIP (ENSCDRG00005001412) #26	ACVR1C (ENSCDRG00005001439) #27	ACVR1 (ENSCDRG00005001459) #30	UPP2 (ENSCDRG00005001485) #31	CCDC148 (ENSCDRG00005001511) #34	PKP4 (ENSCDRG00005001582) #35	DAPL1 (ENSCDRG00005001704) #36	TANC1 (ENSCDRG00005001741) #37	WDSUB1 (ENSCDRG00005001826)	BAZ2B (ENSCDRG00005001912)	MARCHF7 (ENSCDRG00005002072)	CD302 (ENSCDRG00005002145)	LY75 (ENSCDRG00005002322)
Suina	ANCESTRAL SPECIES	3	ENSGT00390000010397.b	ENSGT00390000004912	ENSGT00730000111130	ENSGT00390000018525.b	ENSGT00940000153518.d.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000157247	ENSGT00720000108834	ENSGT00940000155515.a.b.b.k.a #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Chacoan peccary	MODERN SPECIES	88	AMMECR1L (ENSCWAG00000016637)	POLR2D (ENSCWAG00000016676)	WDR33 (ENSCWAG00000016738)	SFT2D3 (ENSCWAG00000016788)	LIMS2 (ENSCWAG00000016821)	GPR17 (ENSCWAG00000017000)	MYO7B (ENSCWAG00000017056)	IWS1 (ENSCWAG00000017472)	FMNL2 (ENSCWAG00000017521) #12	PRPF40A (ENSCWAG00000017555) #14	ARL6IP6 (ENSCWAG00000017593) #16	RPRM (ENSCWAG00000017623) #17	GALNT13 (ENSCWAG00000017653) #18	ENSCWAG00000017694 #19	NR4A2 (ENSCWAG00000017750) #21	GPD2 (ENSCWAG00000017911) #22	GALNT5 (ENSCWAG00000017972) #24	ERMN (ENSCWAG00000018039) #25	CYTIP (ENSCWAG00000018082) #26	ACVR1C (ENSCWAG00000018173) #27	ENSCWAG00000018541	ACVR1 (ENSCWAG00000018570) #30	ENSCWAG00000000035	UPP2 (ENSCWAG00000000111) #31	CCDC148 (ENSCWAG00000000141) #34	PKP4 (ENSCWAG00000000197) #35	DAPL1 (ENSCWAG00000000230) #36	TANC1 (ENSCWAG00000000275) #37	WDSUB1 (ENSCWAG00000000328)	BAZ2B (ENSCWAG00000000391)	MARCHF7 (ENSCWAG00000000432)
Pig	MODERN SPECIES	6	LIMS2 (ENSSSCG00000015862)	GPR17 (ENSSSCG00000040850)	MYO7B (ENSSSCG00000015864)	IWS1 (ENSSSCG00000035410)	ENSSSCG00000035546	FMNL2 (ENSSSCG00000015866) #12	PRPF40A (ENSSSCG00000015867) #14	ARL6IP6 (ENSSSCG00000015868) #16	RPRM (ENSSSCG00000052231) #17	ENSSSCG00000052332	GALNT13 (ENSSSCG00000022671) #18	ENSSSCG00000054934	KCNJ3 (ENSSSCG00000036078) #19	ENSSSCG00000061865	NR4A2 (ENSSSCG00000015871) #21	GPD2 (ENSSSCG00000015872) #22	GALNT5 (ENSSSCG00000026146) #24	ERMN (ENSSSCG00000034503) #25	CYTIP (ENSSSCG00000029753) #26	ACVR1C (ENSSSCG00000015873) #27	ACVR1 (ENSSSCG00000015874) #30	ENSSSCG00000032755	UPP2 (ENSSSCG00000021938) #31	ENSSSCG00000015876	PKP4 (ENSSSCG00000015878) #35	DAPL1 (ENSSSCG00000015879) #36	TANC1 (ENSSSCG00000015880) #37	WDSUB1 (ENSSSCG00000035702)	BAZ2B (ENSSSCG00000015882)	MARCHF7 (ENSSSCG00000015883)	CD302 (ENSSSCG00000036050)
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT01090000260806	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Carnivora	ANCESTRAL SPECIES	17	ENSGT01090000260806	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Caniformia	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000156447.a.b	ENSGT00950000185470	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00950000185470	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Ursidae	ANCESTRAL SPECIES	7	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Ursus	ANCESTRAL SPECIES	4	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00950000185140 #15	ENSGT00390000009987 #16	ENSGT01030000235022	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a	ENSGT01050000244842.a.b.b.a.a.b
Polar bear	MODERN SPECIES	142	TNFAIP6 (ENSUMAG00000000232)	ENSUMAG00000000262	RIF1 (ENSUMAG00000000337)	NEB (ENSUMAG00000001360) #8	ARL5A (ENSUMAG00000002404) #9	CACNB4 (ENSUMAG00000002493) #10	STAM2 (ENSUMAG00000002864) #11	FMNL2 (ENSUMAG00000003036) #12	PRPF40A (ENSUMAG00000004414) #14	ENSUMAG00000005352 #15	ARL6IP6 (ENSUMAG00000005362) #16	ENSUMAG00000005367	GALNT13 (ENSUMAG00000005380) #18	KCNJ3 (ENSUMAG00000005516) #19	NR4A2 (ENSUMAG00000005545) #21	GPD2 (ENSUMAG00000005556) #22	GALNT5 (ENSUMAG00000005567) #24	ERMN (ENSUMAG00000005614) #25	CYTIP (ENSUMAG00000005620) #26	ACVR1C (ENSUMAG00000005629) #27	ACVR1 (ENSUMAG00000005646) #30	CCDC148 (ENSUMAG00000005655) #34	PKP4 (ENSUMAG00000005676) #35	DAPL1 (ENSUMAG00000005700) #36	TANC1 (ENSUMAG00000005841) #37	WDSUB1 (ENSUMAG00000007164)	BAZ2B (ENSUMAG00000007209)	MARCHF7 (ENSUMAG00000007276)	CD302 (ENSUMAG00000007286)	LY75 (ENSUMAG00000007410)	PLA2R1 (ENSUMAG00000008404)
American black bear	MODERN SPECIES	4192																GPD2 (ENSUAMG00000024645) #22
Giant Panda	MODERN SPECIES	11	ENSAMEG00000028408	NMI (ENSAMEG00000013032)	TNFAIP6 (ENSAMEG00000013023)	RIF1 (ENSAMEG00000008461)	NEB (ENSAMEG00000008502) #8	ARL5A (ENSAMEG00000008735) #9	CACNB4 (ENSAMEG00000008758) #10	STAM2 (ENSAMEG00000008825) #11	FMNL2 (ENSAMEG00000017147) #12	PRPF40A (ENSAMEG00000017179) #14	RPRM (ENSAMEG00000019532) #17	GALNT13 (ENSAMEG00000005613) #18	ENSAMEG00000027036	KCNJ3 (ENSAMEG00000029906) #19	NR4A2 (ENSAMEG00000009809) #21	GPD2 (ENSAMEG00000009827) #22	GALNT5 (ENSAMEG00000014381) #24	ERMN (ENSAMEG00000029252) #25	CYTIP (ENSAMEG00000031082) #26	ACVR1C (ENSAMEG00000014338) #27	ACVR1 (ENSAMEG00000014318) #30	ENSAMEG00000031187 #31	CCDC148 (ENSAMEG00000000025) #34	PKP4 (ENSAMEG00000000026) #35	DAPL1 (ENSAMEG00000024131) #36	TANC1 (ENSAMEG00000010277) #37	WDSUB1 (ENSAMEG00000010259)	BAZ2B (ENSAMEG00000010194)	MARCHF7 (ENSAMEG00000025082)	CD302 (ENSAMEG00000000637)	LY75 (ENSAMEG00000000642)
Mustelinae	ANCESTRAL SPECIES	21	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00950000185470	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Ferret	MODERN SPECIES	173	RBM43 (ENSMPUG00000000342)	NMI (ENSMPUG00000000344)	TNFAIP6 (ENSMPUG00000000370)	RIF1 (ENSMPUG00000000371)	NEB (ENSMPUG00000000376) #8	ARL5A (ENSMPUG00000000396) #9	CACNB4 (ENSMPUG00000000400) #10	STAM2 (ENSMPUG00000000404) #11	FMNL2 (ENSMPUG00000000409) #12	PRPF40A (ENSMPUG00000000412) #14	ENSMPUG00000000415 #16	RPRM (ENSMPUG00000019433) #17	GALNT13 (ENSMPUG00000000427) #18	KCNJ3 (ENSMPUG00000000433) #19	NR4A2 (ENSMPUG00000000438) #21	GPD2 (ENSMPUG00000000440) #22	ENSMPUG00000000443	GALNT5 (ENSMPUG00000000452) #24	ERMN (ENSMPUG00000000456) #25	CYTIP (ENSMPUG00000000458) #26	ACVR1C (ENSMPUG00000000461) #27	ACVR1 (ENSMPUG00000000465) #30	CCDC148 (ENSMPUG00000000469) #34	ENSMPUG00000019434	PKP4 (ENSMPUG00000000474) #35	DAPL1 (ENSMPUG00000000479) #36	TANC1 (ENSMPUG00000000482) #37	WDSUB1 (ENSMPUG00000000486)	BAZ2B (ENSMPUG00000000490)	MARCHF7 (ENSMPUG00000000501)	CD302 (ENSMPUG00000000503)
American mink	MODERN SPECIES	235											RPRM (ENSNVIG00000008208) #17	ENSNVIG00000008190	GALNT13 (ENSNVIG00000008096) #18	IRK3 (ENSNVIG00000008064) #19	NR4A2 (ENSNVIG00000008016) #21	GPD2 (ENSNVIG00000007955) #22
Canidae	ANCESTRAL SPECIES	45												ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000156447.a.b	ENSGT00950000185470	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Canis_lupus	ANCESTRAL SPECIES	39												ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00390000011401.cb.b	ENSGT00950000182802.B.a.b.b.a.a	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000156447.a.b	ENSGT00950000185470	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359
Dog	MODERN SPECIES	29												ENSCAFG00845024660 #17	GALNT13 (ENSCAFG00845024771) #18	KCNJ3 (ENSCAFG00845025035) #19	NR4A2 (ENSCAFG00845025175) #21	GPD2 (ENSCAFG00845025352) #22	ENSCAFG00845025564	ENSCAFG00845025578	GALNT5 (ENSCAFG00845025607) #24	ERMN (ENSCAFG00845025677) #25	CYTIP (ENSCAFG00845025755) #26	ACVR1C (ENSCAFG00845026018) #27	ACVR1 (ENSCAFG00845026311) #30	CCDC148 (ENSCAFG00845026619) #34	PKP4 (ENSCAFG00845026973) #35	DAPL1 (ENSCAFG00845027456) #36	ENSCAFG00845027531	ENSCAFG00845027802	WDSUB1 (ENSCAFG00845027961)	BAZ2B (ENSCAFG00845028154)	ENSCAFG00845028381
Dingo	MODERN SPECIES	46												RPRM (ENSCAFG00020010171) #17	GALNT13 (ENSCAFG00020010074) #18	KCNJ3 (ENSCAFG00020010055) #19	NR4A2 (ENSCAFG00020010007) #21	GPD2 (ENSCAFG00020009930) #22	ENSCAFG00020009925	ENSCAFG00020009914	ENSCAFG00020009909	ENSCAFG00020009906	ENSCAFG00020009902 #24	ERMN (ENSCAFG00020009897) #25	CYTIP (ENSCAFG00020009880) #26	ACVR1C (ENSCAFG00020009844) #27	ACVR1 (ENSCAFG00020009821) #30	CCDC148 (ENSCAFG00020009776) #34	PKP4 (ENSCAFG00020009748) #35	DAPL1 (ENSCAFG00020009739) #36	ENSCAFG00020009736	TANC1 (ENSCAFG00020006513) #37	WDSUB1 (ENSCAFG00020006387)
Red fox	MODERN SPECIES	15													GALNT13 (ENSVVUG00000020497) #18	KCNJ3 (ENSVVUG00000020489) #19	NR4A2 (ENSVVUG00000020464) #21	GPD2 (ENSVVUG00000020453) #22	GALNT5 (ENSVVUG00000020446) #24	ERMN (ENSVVUG00000020443) #25	CYTIP (ENSVVUG00000020441) #26	ACVR1C (ENSVVUG00000020440) #27	ACVR1 (ENSVVUG00000020425) #30	CCDC148 (ENSVVUG00000020409) #34	PKP4 (ENSVVUG00000020392) #35	DAPL1 (ENSVVUG00000020389) #36	ENSVVUG00000020388	ENSVVUG00000020386	TANC1 (ENSVVUG00000020115) #37	WDSUB1 (ENSVVUG00000020080)	BAZ2B (ENSVVUG00000019442)	ENSVVUG00000019352	ENSVVUG00000019348
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000157201	ENSGT00910000144227.s.b	ENSGT01050000246169	ENSGT00390000012204	ENSGT00940000154533.b.d.e #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00960000190219	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Panthera	ANCESTRAL SPECIES	9	ENSGT00910000144227.s.b	ENSGT01050000246169	ENSGT00390000012204	ENSGT00940000154533.b.d.e #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00960000190219	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00910000144227.s.b	ENSGT01050000246169	ENSGT00390000012204	ENSGT00940000154533.b.d.e #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00960000190219	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
lion	MODERN SPECIES	8	ENSPLOG00000022454	ENSPLOG00000022451	RIF1 (ENSPLOG00000022230)	NEB (ENSPLOG00000021581) #8	ARL5A (ENSPLOG00000021319) #9	CACNB4 (ENSPLOG00000020979) #10	STAM2 (ENSPLOG00000020809) #11	FMNL2 (ENSPLOG00000020750) #12	PRPF40A (ENSPLOG00000020664) #14	ARL6IP6 (ENSPLOG00000020626) #16	RPRM (ENSPLOG00000020616) #17	ENSPLOG00000020601	GALNT13 (ENSPLOG00000020521) #18	ENSPLOG00000020488 #19	NR4A2 (ENSPLOG00000020391) #21	GPD2 (ENSPLOG00000020340) #22	GALNT5 (ENSPLOG00000020263) #24	ERMN (ENSPLOG00000020235) #25	CYTIP (ENSPLOG00000020216) #26	ACVR1C (ENSPLOG00000020053) #27	ACVR1 (ENSPLOG00000020011) #30	ENSPLOG00000019977	CCDC148 (ENSPLOG00000019795) #34	PKP4 (ENSPLOG00000019696) #35	DAPL1 (ENSPLOG00000019656) #36	TANC1 (ENSPLOG00000019620) #37	WDSUB1 (ENSPLOG00000019560)	BAZ2B (ENSPLOG00000019057)	MARCHF7 (ENSPLOG00000018888)	CD302 (ENSPLOG00000018735)	LY75 (ENSPLOG00000018511)
leopard	MODERN SPECIES	1	NEB (ENSPPRG00000002959) #8	ARL5A (ENSPPRG00000008024) #9	CACNB4 (ENSPPRG00000006549) #10	STAM2 (ENSPPRG00000003557) #11	ENSPPRG00000003451	FMNL2 (ENSPPRG00000002927) #12	ENSPPRG00000015709	PRPF40A (ENSPPRG00000001035) #14	ARL6IP6 (ENSPPRG00000000863) #16	RPRM (ENSPPRG00000015575) #17	ENSPPRG00000000163	GALNT13 (ENSPPRG00000023357) #18	ENSPPRG00000015500	KCNJ3 (ENSPPRG00000024706) #19	NR4A2 (ENSPPRG00000024776) #21	GPD2 (ENSPPRG00000014854) #22	GALNT5 (ENSPPRG00000011930) #24	ERMN (ENSPPRG00000011665) #25	CYTIP (ENSPPRG00000011342) #26	ACVR1C (ENSPPRG00000010432) #27	ACVR1 (ENSPPRG00000008596) #30	CCDC148 (ENSPPRG00000008222) #34	ENSPPRG00000006959	PKP4 (ENSPPRG00000004622) #35	DAPL1 (ENSPPRG00000003172) #36	TANC1 (ENSPPRG00000002613) #37	WDSUB1 (ENSPPRG00000001249)	BAZ2B (ENSPPRG00000000317)	MARCHF7 (ENSPPRG00000012377)	CD302 (ENSPPRG00000011741)	LY75 (ENSPPRG00000010499)
Tiger	MODERN SPECIES	117	ENSPTIG00000005894	ENSPTIG00000005642	RIF1 (ENSPTIG00000020652)	NEB (ENSPTIG00000017078) #8	ARL5A (ENSPTIG00000016763) #9	CACNB4 (ENSPTIG00000014914) #10	STAM2 (ENSPTIG00000014432) #11	FMNL2 (ENSPTIG00000013843) #12	PRPF40A (ENSPTIG00000012673) #14	ARL6IP6 (ENSPTIG00000012359) #16	RPRM (ENSPTIG00000012190) #17	ENSPTIG00000010205	GALNT13 (ENSPTIG00000011908) #18	KCNJ3 (ENSPTIG00000011787) #19	NR4A2 (ENSPTIG00000011197) #21	GPD2 (ENSPTIG00000010856) #22	GALNT5 (ENSPTIG00000010695) #24	ERMN (ENSPTIG00000010446) #25	CYTIP (ENSPTIG00000010346) #26	ACVR1C (ENSPTIG00000010133) #27	ACVR1 (ENSPTIG00000009840) #30	CCDC148 (ENSPTIG00000009504) #34	PKP4 (ENSPTIG00000009059) #35	DAPL1 (ENSPTIG00000008896) #36	TANC1 (ENSPTIG00000008763) #37	WDSUB1 (ENSPTIG00000008515)	BAZ2B (ENSPTIG00000007795)	MARCHF7 (ENSPTIG00000007144)	CD302 (ENSPTIG00000006970)	LY75 (ENSPTIG00000006284)	PLA2R1 (ENSPTIG00000005461)
Cat	MODERN SPECIES	239	ENSFCAG00000052372	RIF1 (ENSFCAG00000029742)	ENSFCAG00000006778 #8	ARL5A (ENSFCAG00000014742) #9	CACNB4 (ENSFCAG00000024935) #10	STAM2 (ENSFCAG00000025382) #11	ENSFCAG00000038415	FMNL2 (ENSFCAG00000005239) #12	PRPF40A (ENSFCAG00000005241) #14	ARL6IP6 (ENSFCAG00000032831) #16	RPRM (ENSFCAG00000035890) #17	GALNT13 (ENSFCAG00000002404) #18	ENSFCAG00000027093	KCNJ3 (ENSFCAG00000029250) #19	NR4A2 (ENSFCAG00000011696) #21	GPD2 (ENSFCAG00000011697) #22	GALNT5 (ENSFCAG00000007503) #24	ERMN (ENSFCAG00000038135) #25	CYTIP (ENSFCAG00000028553) #26	ACVR1C (ENSFCAG00000011271) #27	ACVR1 (ENSFCAG00000008054) #30	ENSFCAG00000050722	CCDC148 (ENSFCAG00000007319) #34	PKP4 (ENSFCAG00000015402) #35	DAPL1 (ENSFCAG00000015403) #36	TANC1 (ENSFCAG00000011120) #37	WDSUB1 (ENSFCAG00000030479)	BAZ2B (ENSFCAG00000007573)	MARCHF7 (ENSFCAG00000025572)	CD302 (ENSFCAG00000034070)	LY75 (ENSFCAG00000007081)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Equus	ANCESTRAL SPECIES	18	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a	ENSGT01050000244842.a.b.b.a.a.b
Horse	MODERN SPECIES	9	NEB (ENSECAG00000020638) #8	ARL5A (ENSECAG00000023672) #9	CACNB4 (ENSECAG00000056636) #10	STAM2 (ENSECAG00000021355) #11	FMNL2 (ENSECAG00000011111) #12	ENSECAG00000001048	PRPF40A (ENSECAG00000009113) #14	ARL6IP6 (ENSECAG00000007580) #16	RPRM (ENSECAG00000001246) #17	GALNT13 (ENSECAG00000007821) #18	KCNJ3 (ENSECAG00000001276) #19	ENSECAG00000046581	ENSECAG00000002256	ENSECAG00000058726	NR4A2 (ENSECAG00000014232) #21	GPD2 (ENSECAG00000018290) #22	GALNT5 (ENSECAG00000012388) #24	ERMN (ENSECAG00000017073) #25	CYTIP (ENSECAG00000017457) #26	ACVR1C (ENSECAG00000019682) #27	ACVR1 (ENSECAG00000018902) #30	CCDC148 (ENSECAG00000003553) #34	PKP4 (ENSECAG00000014290) #35	DAPL1 (ENSECAG00000015671) #36	TANC1 (ENSECAG00000018415) #37	WDSUB1 (ENSECAG00000001100)	BAZ2B (ENSECAG00000012235)	MARCHF7 (ENSECAG00000015805)	CD302 (ENSECAG00000020320)	LY5 (ENSECAG00000022703)	PLA2R1 (ENSECAG00000023815)
Donkey	MODERN SPECIES	24	NMI (ENSEASG00005023440)	TNFAIP6 (ENSEASG00005023439)	RIF1 (ENSEASG00005023434)	ENSEASG00005038507 #8	ENSEASG00005023364 #8	ARL5A (ENSEASG00005023347) #9	CACNB4 (ENSEASG00005023346) #10	STAM2 (ENSEASG00005023344) #11	FMNL2 (ENSEASG00005023341) #12	PRPF40A (ENSEASG00005023328) #14	ARL6IP6 (ENSEASG00005023320) #16	RPRM (ENSEASG00005023316) #17	GALNT13 (ENSEASG00005023315) #18	KCNJ3 (ENSEASG00005023313) #19	NR4A2 (ENSEASG00005023310) #21	GPD2 (ENSEASG00005023309) #22	GALNT5 (ENSEASG00005023306) #24	ERMN (ENSEASG00005026686) #25	ENSEASG00005029587 #26	ACVR1C (ENSEASG00005023296) #27	ACVR1 (ENSEASG00005023294) #30	CCDC148 (ENSEASG00005023292) #34	PKP4 (ENSEASG00005023266) #35	DAPL1 (ENSEASG00005023258) #36	TANC1 (ENSEASG00005023239) #37	WDSUB1 (ENSEASG00005023237)	BAZ2B (ENSEASG00005023209)	MARCHF7 (ENSEASG00005023165)	CD302 (ENSEASG00005025575)	LY75 (ENSEASG00005023153)	PLA2R1 (ENSEASG00005023140)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Greater horseshoe bat	MODERN SPECIES	26	RBM43 (ENSRFEG00010004990)	NMI (ENSRFEG00010004983)	TNFAIP6 (ENSRFEG00010004979)	RIF1 (ENSRFEG00010004943)	NEB (ENSRFEG00010003197) #8	ARL5A (ENSRFEG00010001991) #9	CACNB4 (ENSRFEG00010001762) #10	STAM2 (ENSRFEG00010001637) #11	FMNL2 (ENSRFEG00010001562) #12	PRPF40A (ENSRFEG00010001279) #14	ARL6IP6 (ENSRFEG00010001173) #16	RPRM (ENSRFEG00010001141) #17	GALNT13 (ENSRFEG00010001100) #18	KCNJ3 (ENSRFEG00010001072) #19	NR4A2 (ENSRFEG00010001043) #21	GPD2 (ENSRFEG00010001004) #22	GALNT5 (ENSRFEG00010000968) #24	ERMN (ENSRFEG00010000944) #25	CYTIP (ENSRFEG00010000916) #26	ACVR1C (ENSRFEG00010000861) #27	ACVR1 (ENSRFEG00010000822) #30	UPP2 (ENSRFEG00010000790) #31	CCDC148 (ENSRFEG00010000691) #34	ENSRFEG00010000642	PKP4 (ENSRFEG00010000530) #35	DAPL1 (ENSRFEG00010000436) #36	TANC1 (ENSRFEG00010000352) #37	WDSUB1 (ENSRFEG00010000284)	BAZ2B (ENSRFEG00010006183)	MARCHF7 (ENSRFEG00010005700)	CD302 (ENSRFEG00010005638)
Microbat	MODERN SPECIES	1026			ARL5A (ENSMLUG00000003458) #9	CACNB4 (ENSMLUG00000003465) #10	STAM2 (ENSMLUG00000003477) #11	FMNL2 (ENSMLUG00000014867) #12	PRPF40A (ENSMLUG00000014881) #14	ARL6IP6 (ENSMLUG00000023268) #16	ENSMLUG00000030388	RPRM (ENSMLUG00000022854) #17	GALNT13 (ENSMLUG00000015972) #18	KCNJ3 (ENSMLUG00000010559) #19	ENSMLUG00000029954	ENSMLUG00000025509	NR4A2 (ENSMLUG00000008683) #21	GPD2 (ENSMLUG00000001655) #22	GALNT5 (ENSMLUG00000003542) #24	ENSMLUG00000003547 #25	CYTIP (ENSMLUG00000002426) #26	ACVR1C (ENSMLUG00000002433) #27	ACVR1 (ENSMLUG00000010119) #30
Megabat	MODERN SPECIES	7488															NR4A2 (ENSPVAG00000005251) #21	GPD2 (ENSPVAG00000005255) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000001718 #22
Common shrew	MODERN SPECIES	1151																GPD2 (ENSSARG00000006999) #22
Hedgehog	MODERN SPECIES	1684																GPD2 (ENSEEUG00000007968) #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Xenarthra	ANCESTRAL SPECIES	844															ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27
Armadillo	MODERN SPECIES	1110													ENSDNOG00000045432	ENSDNOG00000040257	NR4A2 (ENSDNOG00000031336) #21	GPD2 (ENSDNOG00000009348) #22	GALNT5 (ENSDNOG00000033007) #24	ERMN (ENSDNOG00000040595) #25	CYTIP (ENSDNOG00000049227) #26	ACVR1C (ENSDNOG00000004277) #27	ENSDNOG00000039978	ENSDNOG00000040727	FBXL7 (ENSDNOG00000049796)	ENSDNOG00000031427	ZNF622 (ENSDNOG00000035990)	RETREG1 (ENSDNOG00000018975)	MYO10 (ENSDNOG00000004469)	BASP1 (ENSDNOG00000035443)
Sloth	MODERN SPECIES	1418																GPD2 (ENSCHOG00000008673) #22
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Elephant	MODERN SPECIES	301	RBM43 (ENSLAFG00000010512)	NMI (ENSLAFG00000012842)	TNFAIP6 (ENSLAFG00000009790)	RIF1 (ENSLAFG00000009796)	NEB (ENSLAFG00000009810) #8	ARL5A (ENSLAFG00000032104) #9	CACNB4 (ENSLAFG00000009844) #10	STAM2 (ENSLAFG00000009848) #11	FMNL2 (ENSLAFG00000001605) #12	PRPF40A (ENSLAFG00000001613) #14	ARL6IP6 (ENSLAFG00000001616) #16	RPRM (ENSLAFG00000001386) #17	GALNT13 (ENSLAFG00000005947) #18	KCNJ3 (ENSLAFG00000022282) #19	NR4A2 (ENSLAFG00000018512) #21	GPD2 (ENSLAFG00000009569) #22	GALNT5 (ENSLAFG00000003531) #24	ERMN (ENSLAFG00000006133) #25	CYTIP (ENSLAFG00000000259) #26	ACVR1C (ENSLAFG00000022543) #27	ACVR1 (ENSLAFG00000006865) #30	ENSLAFG00000028549	CCDC148 (ENSLAFG00000002906) #34	PKP4 (ENSLAFG00000011403) #35	DAPL1 (ENSLAFG00000004582) #36	TANC1 (ENSLAFG00000009825) #37	WDSUB1 (ENSLAFG00000009831)	BAZ2B (ENSLAFG00000014380)	MARCHF7 (ENSLAFG00000010143)	CD302 (ENSLAFG00000010149)	LY75 (ENSLAFG00000010153)
Hyrax	MODERN SPECIES	1288																GPD2 (ENSPCAG00000008329) #22
Tenrec	MODERN SPECIES	1617																GPD2 (ENSETEG00000003623) #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00940000160377.p	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1018			ENSVURG00010022061 #11	ENSVURG00010022038 #12	ENSVURG00010022019 #14	ENSVURG00010022015 #16	ENSVURG00010022012 #17	ENSVURG00010022009	ENSVURG00010022002 #18	ENSVURG00010021934 #18	ENSVURG00010021925 #19	ENSVURG00010021916	ENSVURG00010021913	ENSVURG00010021911	ENSVURG00010021905 #21	ENSVURG00010021899 #22	ENSVURG00010021893 #24	ENSVURG00010021888 #25	ENSVURG00010021884 #26	ENSVURG00010021840 #27	ENSVURG00010021820 #30	ENSVURG00010021811 #31	CCDC148 (ENSVURG00010021806) #34	ENSVURG00010021798 #35	ENSVURG00010021789 #36	ENSVURG00010021779 #37	ENSVURG00010021773	ENSVURG00010021762	ENSVURG00010021748	ENSVURG00010021743	ENSVURG00010021736
Common wonbat	MODERN SPECIES	1018	SPATS2L (ENSVURG00010016539)	KCTD18 (ENSVURG00010016512)	ENSVURG00010016490 #11	ENSVURG00010016392 #12	ENSVURG00010016286 #14	ENSVURG00010016266 #16	ENSVURG00010016261 #17	ENSVURG00010016251	ENSVURG00010016231 #18	ENSVURG00010015949 #18	ENSVURG00010015914 #19	ENSVURG00010015905	ENSVURG00010015899	ENSVURG00010015896	ENSVURG00010015880 #21	ENSVURG00010015850 #22	ENSVURG00010015786 #24	ENSVURG00010015774 #25	ENSVURG00010015768 #26	ENSVURG00010015714 #27	ENSVURG00010015688 #30	ENSVURG00010015137 #31	ENSVURG00010015002 #35	ENSVURG00010014961 #36	ENSVURG00010014943 #37	ENSVURG00010014928	ENSVURG00010004356	ENSVURG00010003796	ENSVURG00010003780	ENSVURG00010003645	ENSVURG00010003629
koala	MODERN SPECIES	106								GALNT13 (ENSPCIG00000019129) #18	ENSPCIG00000009709	KCNJ3 (ENSPCIG00000028769) #19	ENSPCIG00000032559	ENSPCIG00000023300	ENSPCIG00000023299	NR4A2 (ENSPCIG00000015078) #21	ENSPCIG00000015071	GPD2 (ENSPCIG00000015066) #22	GALNT5 (ENSPCIG00000003972) #24	ERMN (ENSPCIG00000003984) #25	CYTIP (ENSPCIG00000003994) #26	ACVR1C (ENSPCIG00000004001) #27	ENSPCIG00000004022	ACVR1 (ENSPCIG00000004031) #30	UPP2 (ENSPCIG00000028123) #31	ENSPCIG00000028794	PKP4 (ENSPCIG00000028795) #35	ENSPCIG00000036633	DAPL1 (ENSPCIG00000037017) #36	TANC1 (ENSPCIG00000002529) #37	WDSUB1 (ENSPCIG00000002545)	BAZ2B (ENSPCIG00000003070)	MARCHF7 (ENSPCIG00000018311)
Wallaby	MODERN SPECIES	2391																GPD2 (ENSMEUG00000004344) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000026547	NMI (ENSSHAG00000018439)	TNFAIP6 (ENSSHAG00000022583)	RIF1 (ENSSHAG00000018552)	NEB (ENSSHAG00000018591) #8	CACNB4 (ENSSHAG00000026802) #10	STAM2 (ENSSHAG00000029280) #11	FMNL2 (ENSSHAG00000005004) #12	PRPF40A (ENSSHAG00000009029) #14	ARL6IP6 (ENSSHAG00000028317) #16	RPRM (ENSSHAG00000025986) #17	GALNT13 (ENSSHAG00000031696) #18	KCNJ3 (ENSSHAG00000032170) #19	ENSSHAG00000032207	NR4A2 (ENSSHAG00000012981) #21	GPD2 (ENSSHAG00000013793) #22	GALNT5 (ENSSHAG00000016592) #24	ERMN (ENSSHAG00000025380) #25	CYTIP (ENSSHAG00000016862) #26	ACVR1C (ENSSHAG00000017075) #27	ACVR1 (ENSSHAG00000017429) #30	UPP2 (ENSSHAG00000017989) #31	CCDC148 (ENSSHAG00000018087) #34	PKP4 (ENSSHAG00000018371) #35	DAPL1 (ENSSHAG00000018675) #36	TANC1 (ENSSHAG00000018782) #37	WDSUB1 (ENSSHAG00000018839)	BAZ2B (ENSSHAG00000018872)	MARCHF7 (ENSSHAG00000006983)	ENSSHAG00000007345	LY75 (ENSSHAG00000007930)
Opossum	MODERN SPECIES	3	STAM2 (ENSMODG00000004047) #11	FMNL2 (ENSMODG00000004138) #12	PRPF40A (ENSMODG00000004179) #14	ARL6IP6 (ENSMODG00000004186) #16	RPRM (ENSMODG00000044197) #17	ENSMODG00000044092	ENSMODG00000040499 #18	GALNT13 (ENSMODG00000004227) #18	ENSMODG00000041559	ENSMODG00000044766 #33	ENSMODG00000029178	ENSMODG00000043495 #33	KCNJ3 (ENSMODG00000004238) #19	ENSMODG00000048202	NR4A2 (ENSMODG00000004298) #21	GPD2 (ENSMODG00000004343) #22	GALNT5 (ENSMODG00000004371) #24	ERMN (ENSMODG00000048152) #25	CYTIP (ENSMODG00000004389) #26	ACVR1C (ENSMODG00000004411) #27	ACVR1 (ENSMODG00000004431) #30	UPP2 (ENSMODG00000004449) #31	CCDC148 (ENSMODG00000004460) #34	ENSMODG00000004479 #35	ENSMODG00000028615	DAPL1 (ENSMODG00000044467) #36	TANC1 (ENSMODG00000004491) #37	WDSUB1 (ENSMODG00000004957)	BAZ2B (ENSMODG00000005005)	MARCHF7 (ENSMODG00000005032)	CD302 (ENSMODG00000047540)
Platypus	MODERN SPECIES	20	MMADHC (ENSOANG00000006072)	RND3 (ENSOANG00000038274)	ENSOANG00000006075	TNFAIP6 (ENSOANG00000037517)	RIF1 (ENSOANG00000006078)	NEB (ENSOANG00000006081) #8	ARL5A (ENSOANG00000046299) #9	CACNB4 (ENSOANG00000006106) #10	STAM2 (ENSOANG00000012041) #11	FMNL2 (ENSOANG00000006108) #12	PRPF40A (ENSOANG00000006113) #14	ARL6IP6 (ENSOANG00000044701) #16	GALNT13 (ENSOANG00000006116) #18	KCNJ3 (ENSOANG00000038534) #19	NR4A2 (ENSOANG00000006120) #21	GPD2 (ENSOANG00000006122) #22	GALNT5 (ENSOANG00000006126) #24	ERMN (ENSOANG00000042538) #25	CYTIP (ENSOANG00000006129) #26	ACVR1C (ENSOANG00000006133) #27	ACVR1 (ENSOANG00000006134) #30	CCDC148 (ENSOANG00000006135) #34	PKP4 (ENSOANG00000006136) #35	DAPL1 (ENSOANG00000006142) #36	TANC1 (ENSOANG00000006143) #37	WDSUB1 (ENSOANG00000006145)	ENSOANG00000044979	ENSOANG00000006146	MARCHF7 (ENSOANG00000006153)	CD302 (ENSOANG00000048417)	LY75 (ENSOANG00000006154)
Sauria	ANCESTRAL SPECIES		ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00960000190136	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00960000190136	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Aves	ANCESTRAL SPECIES	8	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Golden eagle	MODERN SPECIES	22	RND3 (ENSACCG00020004714)	RBM43 (ENSACCG00020004722)	NMI (ENSACCG00020004728)	TNFAIP6 (ENSACCG00020004742)	RIF1 (ENSACCG00020004834)	NEB (ENSACCG00020008753) #8	ARL5A (ENSACCG00020011953) #9	CACNB4 (ENSACCG00020012004) #10	STAM2 (ENSACCG00020012068) #11	FMNL2 (ENSACCG00020012193) #12	PRPF40A (ENSACCG00020012312) #14	RPRM (ENSACCG00020012360) #17	GALNT13 (ENSACCG00020012390) #18	KCNJ3 (ENSACCG00020012424) #19	NR4A2 (ENSACCG00020012439) #21	GPD2 (ENSACCG00020012475) #22	GALNT5 (ENSACCG00020012510) #24	ERMN (ENSACCG00020012533) #25	CYTIP (ENSACCG00020012544) #26	ACVR1C (ENSACCG00020012594) #27	ACVR1 (ENSACCG00020012670) #30	UPP2 (ENSACCG00020012695) #31	CCDC148 (ENSACCG00020012727) #34	PKP4 (ENSACCG00020012778) #35	ENSACCG00020012830	TANC1 (ENSACCG00020012885) #37	WDSUB1 (ENSACCG00020012956)	BAZ2B (ENSACCG00020014362)	MARCHF7 (ENSACCG00020015468)
Kakapo	MODERN SPECIES	22	RND3 (ENSSHBG00005017805)	RBM43 (ENSSHBG00005017793)	NMI (ENSSHBG00005017783)	TNFAIP6 (ENSSHBG00005017775)	RIF1 (ENSSHBG00005017612)	NEB (ENSSHBG00005017527) #8	ARL5A (ENSSHBG00005017513) #9	CACNB4 (ENSSHBG00005017507) #10	STAM2 (ENSSHBG00005017498) #11	FMNL2 (ENSSHBG00005017491) #12	PRPF40A (ENSSHBG00005013368) #14	RPRM (ENSSHBG00005012981) #17	GALNT13 (ENSSHBG00005012937) #18	KCNJ3 (ENSSHBG00005012922) #19	NR4A2 (ENSSHBG00005012900) #21	GPD2 (ENSSHBG00005012863) #22	GALNT5 (ENSSHBG00005012831) #24	CYTIP (ENSSHBG00005012812) #26	ENSSHBG00005012797	ACVR1C (ENSSHBG00005012735) #27	ACVR1 (ENSSHBG00005012706) #30	UPP2 (ENSSHBG00005012682) #31	CCDC148 (ENSSHBG00005012608) #34	PKP4 (ENSSHBG00005012566) #35	DAPL1 (ENSSHBG00005012539) #36	TANC1 (ENSSHBG00005012165) #37	WDSUB1 (ENSSHBG00005012030)	BAZ2B (ENSSHBG00005005153)	MARCHF7 (ENSSHBG00005004988)	RNLS (ENSSHBG00005004973)	PTEN (ENSSHBG00005019622)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a.b #19	ENSGT01080000257365.b.a.a.b.a.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a.b #19	ENSGT01080000257365.b.a.a.b.a.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a.b #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Medium ground finch	MODERN SPECIES	225														ENSGFOG00000006718 #21	ENSGFOG00000006723 #21	GPD2 (ENSGFOG00000006736) #22	GALNT5 (ENSGFOG00000006759) #24	ENSGFOG00000006765	ENSGFOG00000006771	ACVR1C (ENSGFOG00000006788) #27	ACVR1 (ENSGFOG00000006907) #30	UPP2 (ENSGFOG00000006916) #31	CCDC148 (ENSGFOG00000006930) #34	PKP4 (ENSGFOG00000006957) #35	DAPL1 (ENSGFOG00000006990) #36	TANC1 (ENSGFOG00000007013) #37	WDSUB1 (ENSGFOG00000007046)	BAZ2B (ENSGFOG00000007278)	MARCHF7 (ENSGFOG00000012051)
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a.b #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Zebra finch	MODERN SPECIES	29	RBM43 (ENSTGUG00000011995)	NMI (ENSTGUG00000011996)	TNFAIP6 (ENSTGUG00000012000)	NEB (ENSTGUG00000012003) #8	ARL5A (ENSTGUG00000024176) #9	CACNB4 (ENSTGUG00000025861) #10	ENSTGUG00000024126	STAM2 (ENSTGUG00000012089) #11	FMNL2 (ENSTGUG00000012102) #12	PRPF40A (ENSTGUG00000012118) #14	RPRM (ENSTGUG00000024849) #17	GALNT13 (ENSTGUG00000012138) #18	KCNJ3 (ENSTGUG00000029345) #19	ENSTGUG00000026561	NR4A2 (ENSTGUG00000012173) #21	GPD2 (ENSTGUG00000012157) #22	GALNT5 (ENSTGUG00000022723) #24	ERMN (ENSTGUG00000029473) #25	CYTIP (ENSTGUG00000016854) #26	ACVR1C (ENSTGUG00000028213) #27	ACVR1 (ENSTGUG00000012182) #30	UPP2 (ENSTGUG00000012193) #31	CCDC148 (ENSTGUG00000012199) #34	PKP4 (ENSTGUG00000012202) #35	DAPL1 (ENSTGUG00000012210) #36	TANC1 (ENSTGUG00000012212) #37	WDSUB1 (ENSTGUG00000012224)	BAZ2B (ENSTGUG00000012233)	MARCHF7 (ENSTGUG00000012253)
Common canary	MODERN SPECIES	8	ENSSCAG00000008066	RBM43 (ENSSCAG00000008064)	NMI (ENSSCAG00000008060)	TNFAIP6 (ENSSCAG00000008054)	RIF1 (ENSSCAG00000007793)	NEB (ENSSCAG00000005308) #8	ARL5A (ENSSCAG00000004911) #9	CACNB4 (ENSSCAG00000004889) #10	STAM2 (ENSSCAG00000004872) #11	FMNL2 (ENSSCAG00000004864) #12	PRPF40A (ENSSCAG00000004834) #14	ENSSCAG00000004826 #18	ENSSCAG00000004822 #18	ENSSCAG00000004814 #21	ENSSCAG00000004811 #21	GPD2 (ENSSCAG00000004804) #22	GALNT5 (ENSSCAG00000004784) #24	CYTIP (ENSSCAG00000004723) #26	ACVR1C (ENSSCAG00000004676) #27	ACVR1 (ENSSCAG00000004646) #30	UPP2 (ENSSCAG00000004632) #31	CCDC148 (ENSSCAG00000004626) #34	ENSSCAG00000004624 #35	ENSSCAG00000004617 #35	DAPL1 (ENSSCAG00000004609) #36	TANC1 (ENSSCAG00000004584) #37	WDSUB1 (ENSSCAG00000004569)	ENSSCAG00000004560	ENSSCAG00000004552	MARCHF7 (ENSSCAG00000004550)
Flycatcher	MODERN SPECIES	26	TNFAIP6 (ENSFALG00000013873)	RIF1 (ENSFALG00000013874)	NEB (ENSFALG00000013894) #8	ARL5A (ENSFALG00000023620) #9	CACNB4 (ENSFALG00000013909) #10	STAM2 (ENSFALG00000013920) #11	FMNL2 (ENSFALG00000013923) #12	ENSFALG00000025688	PRPF40A (ENSFALG00000013930) #14	RPRM (ENSFALG00000027840) #17	GALNT13 (ENSFALG00000013944) #18	KCNJ3 (ENSFALG00000013952) #19	NR4A2 (ENSFALG00000013954) #21	ENSFALG00000026419	ENSFALG00000025968	GPD2 (ENSFALG00000003038) #22	GALNT5 (ENSFALG00000003045) #24	ACVR1C (ENSFALG00000003064) #27	ACVR1 (ENSFALG00000003085) #30	UPP2 (ENSFALG00000028218) #31	CCDC148 (ENSFALG00000003110) #34	ENSFALG00000024668 #35	ENSFALG00000003128 #35	ENSFALG00000027803	TANC1 (ENSFALG00000003187) #37	WDSUB1 (ENSFALG00000023563)	BAZ2B (ENSFALG00000003242)	MARCHF7 (ENSFALG00000003263)
Great tit	MODERN SPECIES	27	TNFAIP6 (ENSPMJG00000020005)	RIF1 (ENSPMJG00000020006)	NEB (ENSPMJG00000020007) #8	ARL5A (ENSPMJG00000000061) #9	CACNB4 (ENSPMJG00000000088) #10	STAM2 (ENSPMJG00000000177) #11	FMNL2 (ENSPMJG00000000755) #12	PRPF40A (ENSPMJG00000002878) #14	ENSPMJG00000004518	GALNT13 (ENSPMJG00000004522) #18	KCNJ3 (ENSPMJG00000004535) #19	ENSPMJG00000004541	ENSPMJG00000004575	ENSPMJG00000004578 #21	ENSPMJG00000004579 #21	GPD2 (ENSPMJG00000004596) #22	GALNT5 (ENSPMJG00000004602) #24	CYTIP (ENSPMJG00000004614) #26	ACVR1C (ENSPMJG00000004622) #27	ACVR1 (ENSPMJG00000004638) #30	UPP2 (ENSPMJG00000004650) #31	CCDC148 (ENSPMJG00000004651) #34	PKP4 (ENSPMJG00000004657) #35	TANC1 (ENSPMJG00000004660) #37	WDSUB1 (ENSPMJG00000004694)	BAZ2B (ENSPMJG00000004742)	MARCHF7 (ENSPMJG00000009895)
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT00550000075046
Anatidae	ANCESTRAL SPECIES	37	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d.s #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b.f #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT00960000191069	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT00550000075046
Pink-footed goose	MODERN SPECIES	232											FMNL2 (ENSABRG00000018225) #12	PRPF40A (ENSABRG00000018200) #14	RPRM (ENSABRG00000018197) #17	GALNT13 (ENSABRG00000018182) #18	NR4A2 (ENSABRG00000018157) #21	GPD2 (ENSABRG00000018142) #22	GALNT5 (ENSABRG00000018131) #24	ENSABRG00000018128	CYTIP (ENSABRG00000018126) #26	ACVR1C (ENSABRG00000018121) #27	ACVR1 (ENSABRG00000018114) #30
Duck	MODERN SPECIES	25	ESYT3 (ENSAPLG00000009458)	CEP70 (ENSAPLG00000009891)	FAIM (ENSAPLG00000010169)	PARP9 (ENSAPLG00000010291)	DTX3L (ENSAPLG00000031101)	ENSAPLG00000010410	ANKZF1 (ENSAPLG00000010753)	ATG9A (ENSAPLG00000010993)	ABCB6 (ENSAPLG00000011094)	ZFAND2B (ENSAPLG00000021109)	ENSAPLG00000012094	CNPPD1 (ENSAPLG00000023186)	ENSAPLG00000021175	IHH (ENSAPLG00000027890)	ENSAPLG00000019403 #21	GPD2 (ENSAPLG00000010646) #22	GALNT5 (ENSAPLG00000010565) #24	ENSAPLG00000027196	CYTIP (ENSAPLG00000010293) #26	ACVR1C (ENSAPLG00000005547) #27	ACVR1 (ENSAPLG00000004767) #30	UPP2 (ENSAPLG00000004498) #31	CCDC148 (ENSAPLG00000004224) #34	PKP4 (ENSAPLG00000003306) #35	DAPL1 (ENSAPLG00000003302) #36	TANC1 (ENSAPLG00000002937) #37	WDSUB1 (ENSAPLG00000002463)	BAZ2B (ENSAPLG00000015688)	MARCHF7 (ENSAPLG00000015604)
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT00550000075046
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT00550000075046
Turkey	DUPLICATION
Turkey	MODERN SPECIES	27	ENSMGAG00000018309	ENSMGAG00000008673	ENSMGAG00000019441	ENSMGAG00000017576	ENSMGAG00000012953	ENSMGAG00000012945 #37	ENSMGAG00000012950	ENSMGAG00000021091	PKP4 (ENSMGAG00000012908) #35	ENSMGAG00000012922 #34	ENSMGAG00000012901 #31	ACVR1 (ENSMGAG00000012891) #30	ENSMGAG00000012933 #26	ENSMGAG00000012880 #27	GALNT5 (ENSMGAG00000012929) #24	ENSMGAG00000012868 #22	ENSMGAG00000022185 #22	ENSMGAG00000020589 #21	ENSMGAG00000012861 #19	ENSMGAG00000020554 #18	ENSMGAG00000022546 #18	ENSMGAG00000018740 #18	ENSMGAG00000012826 #12	ENSMGAG00000012843 #14	STAM2 (ENSMGAG00000012813) #11	ENSMGAG00000012799 #10	ENSMGAG00000012795 #9	ENSMGAG00000012782 #8	ENSMGAG00000012743 #8	ENSMGAG00000019364 #8	ENSMGAG00000022891 #8
Turkey	MODERN SPECIES	27	ENSMGAG00000008673	ENSMGAG00000019441	ENSMGAG00000017576	ENSMGAG00000012953	ENSMGAG00000012945 #37	ENSMGAG00000012950	ENSMGAG00000021091	PKP4 (ENSMGAG00000012908) #35	ENSMGAG00000012922 #34	ENSMGAG00000012901 #31	ACVR1 (ENSMGAG00000012891) #30	ENSMGAG00000012933 #26	ENSMGAG00000012880 #27	GALNT5 (ENSMGAG00000012929) #24	ENSMGAG00000012868 #22	ENSMGAG00000022185 #22	ENSMGAG00000020589 #21	ENSMGAG00000012861 #19	ENSMGAG00000020554 #18	ENSMGAG00000022546 #18	ENSMGAG00000018740 #18	ENSMGAG00000012826 #12	ENSMGAG00000012843 #14	STAM2 (ENSMGAG00000012813) #11	ENSMGAG00000012799 #10	ENSMGAG00000012795 #9	ENSMGAG00000012782 #8	ENSMGAG00000012743 #8	ENSMGAG00000019364 #8	ENSMGAG00000022891 #8	ENSMGAG00000017715 #8
Chicken	MODERN SPECIES	36	RBM43 (ENSGALG00010009690)	NMI (ENSGALG00010009731)	TNFAIP6 (ENSGALG00010009793)	RIF1 (ENSGALG00010009850)	ENSGALG00010010115 #8	ENSGALG00010010195 #8	ARL5A (ENSGALG00010010205) #9	CACNB4 (ENSGALG00010010255) #10	STAM2 (ENSGALG00010010287) #11	FMNL2 (ENSGALG00010010336) #12	PRPF40A (ENSGALG00010010386) #14	RPRM (ENSGALG00010011002) #17	GALNT13 (ENSGALG00010010448) #18	KCNJ3 (ENSGALG00010010471) #19	NR4A2 (ENSGALG00010010499) #21	GPD2 (ENSGALG00010010528) #22	ENSGALG00010011007 #24	ENSGALG00010010544 #24	ERMN (ENSGALG00010010567) #25	CYTIP (ENSGALG00010010586) #26	ACVR1C (ENSGALG00010010638) #27	ATVR1 (ENSGALG00010010745) #30	UPP2 (ENSGALG00010010778) #31	CCDC148 (ENSGALG00010010784) #34	PKP4 (ENSGALG00010010824) #35	TANC1 (ENSGALG00010010917) #37	WDSUB1 (ENSGALG00010010943)	BAZ2B (ENSGALG00010010965)	MARCH7 (ENSGALG00010010987)	NAA20 (ENSGALG00010010994)
Japanese quail	MODERN SPECIES	25	RND3 (ENSCJPG00005020670)	RBM43 (ENSCJPG00005020668)	NMI (ENSCJPG00005020666)	TNFAIP6 (ENSCJPG00005020664)	RIF1 (ENSCJPG00005020659)	ENSCJPG00005020515 #8	ARL5A (ENSCJPG00005020514) #9	CACNB4 (ENSCJPG00005020513) #10	STAM2 (ENSCJPG00005020512) #11	FMNL2 (ENSCJPG00005020511) #12	PRPF40A (ENSCJPG00005020508) #14	RPRM (ENSCJPG00005020506) #17	GALNT13 (ENSCJPG00005020504) #18	KCNJ3 (ENSCJPG00005020503) #19	NR4A2 (ENSCJPG00005020500) #21	GPD2 (ENSCJPG00005020499) #22	ENSCJPG00005020498 #24	ENSCJPG00005020497 #24	ENSCJPG00005020496 #25	CYTIP (ENSCJPG00005020495) #26	ACVR1C (ENSCJPG00005020494) #27	ACVR1 (ENSCJPG00005020493) #30	KYNU (ENSCJPG00005020492)	ENSCJPG00005020490	LRP1B (ENSCJPG00005020489)	ENSCJPG00005020487	ENSCJPG00005020483	ENSCJPG00005020482	NXPH2 (ENSCJPG00005020480)	SPOPL (ENSCJPG00005020479)	HNMT (ENSCJPG00005020477)
African ostrich	MODERN SPECIES	319	NMI (ENSSCUG00000003597)	TNFAIP6 (ENSSCUG00000003603)	RIF1 (ENSSCUG00000003638)	NEB (ENSSCUG00000003691) #8	ARL5A (ENSSCUG00000003706) #9	CACNB4 (ENSSCUG00000003713) #10	STAM2 (ENSSCUG00000003717) #11	FMNL2 (ENSSCUG00000003723) #12	PRPF40A (ENSSCUG00000003728) #14	ENSSCUG00000003733	ENSSCUG00000003735	GALNT13 (ENSSCUG00000003741) #18	KCNJ3 (ENSSCUG00000003749) #19	ENSSCUG00000003280 #21	ENSSCUG00000003282 #21	GPD2 (ENSSCUG00000003285) #22	ENSSCUG00000003292 #24	ENSSCUG00000003294	CYTIP (ENSSCUG00000003296) #26	ACVR1C (ENSSCUG00000003297) #27	ACVR1 (ENSSCUG00000003298) #30	CCDC148 (ENSSCUG00000003300) #34	PKP4 (ENSSCUG00000003308) #35	TANC1 (ENSSCUG00000003334) #37	ENSSCUG00000003356	WDSUB1 (ENSSCUG00000003357)	BAZ2B (ENSSCUG00000003378)
Australian saltwater crocodile	MODERN SPECIES	66	RBM43 (ENSCPRG00005008350)	NMI (ENSCPRG00005008353)	TNFAIP6 (ENSCPRG00005008363)	RIF1 (ENSCPRG00005008380)	ENSCPRG00005008458 #8	ENSCPRG00005008539 #8	ARL5A (ENSCPRG00005008551) #9	CACNB4 (ENSCPRG00005008584) #10	STAM2 (ENSCPRG00005008747) #11	FMNL2 (ENSCPRG00005008762) #12	PRPF40A (ENSCPRG00005008786) #14	ARL6IP6 (ENSCPRG00005008806) #16	GALNT13 (ENSCPRG00005008830) #18	KCNJ3 (ENSCPRG00005008883) #19	NR4A2 (ENSCPRG00005008903) #21	GPD2 (ENSCPRG00005008911) #22	ENSCPRG00005008934	GALNT5 (ENSCPRG00005008951) #24	ERMN (ENSCPRG00005008954) #25	ENSCPRG00005008959	ACVR1C (ENSCPRG00005008976) #27	ACVR1 (ENSCPRG00005008980) #30	UPP2 (ENSCPRG00005008995) #31	CCDC148 (ENSCPRG00005009004) #34	PKP4 (ENSCPRG00005009023) #35	DAPL1 (ENSCPRG00005009038) #36	TANC1 (ENSCPRG00005009124) #37	ENSCPRG00005009844	WDSUB1 (ENSCPRG00005009848)	BAZ2B (ENSCPRG00005009854)	MARCHF7 (ENSCPRG00005009891)
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00960000190136	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00960000190136	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a
Emydidae	ANCESTRAL SPECIES	4	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00960000190136	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
painted turtle	MODERN SPECIES	2363	GNAT3 (ENSCPBG00000026706)	CD36 (ENSCPBG00000026703)	SEMA3C (ENSCPBG00000026700)	HGF (ENSCPBG00000026699)	CACNA2D1 (ENSCPBG00000026696)	PCLO (ENSCPBG00000026686)	ENSCPBG00000026666	ENSCPBG00000026660	ENSCPBG00000026657	PCDH20 (ENSCPBG00000026652)	TDRD3 (ENSCPBG00000026646)	DIAPH3 (ENSCPBG00000026636)	GALNT13 (ENSCPBG00000026631) #18	ENSCPBG00000026628 #19	NR4A2 (ENSCPBG00000026617) #21	GPD2 (ENSCPBG00000026604) #22	GALNT5 (ENSCPBG00000026600) #24	ERMN (ENSCPBG00000026596) #25	CYTIP (ENSCPBG00000026594) #26	ACVR1C (ENSCPBG00000026513) #27	ACVR1 (ENSCPBG00000026496) #30	UPP2 (ENSCPBG00000026493) #31	CCDC148 (ENSCPBG00000026491) #34	ENSCPBG00000026489 #35	ENSCPBG00000026486 #35	DAPL1 (ENSCPBG00000026485) #36	ENSCPBG00000026484	TANC1 (ENSCPBG00000026483) #37	WDSUB1 (ENSCPBG00000026482)	BAZ2B (ENSCPBG00000026480)	MARCHF7 (ENSCPBG00000026479)
Three-toed box turtle	MODERN SPECIES	25	RND3 (ENSTMTG00000013856)	RBM43 (ENSTMTG00000013865)	NMI (ENSTMTG00000013868)	RIF1 (ENSTMTG00000013981)	NEB (ENSTMTG00000016118) #8	ARL5A (ENSTMTG00000022372) #9	CACNB4 (ENSTMTG00000022421) #10	STAM2 (ENSTMTG00000022506) #11	FMNL2 (ENSTMTG00000022518) #12	PRPF40A (ENSTMTG00000022533) #14	ARL6IP6 (ENSTMTG00000022540) #16	RPRM (ENSTMTG00000022542) #17	GALNT13 (ENSTMTG00000022547) #18	KCNJ3 (ENSTMTG00000022553) #19	NR4A2 (ENSTMTG00000022554) #21	GPD2 (ENSTMTG00000022557) #22	GALNT5 (ENSTMTG00000022562) #24	ENSTMTG00000022564	ACVR1C (ENSTMTG00000022567) #27	ACVR1 (ENSTMTG00000022573) #30	UPP2 (ENSTMTG00000022576) #31	CCDC148 (ENSTMTG00000022579) #34	PKP4 (ENSTMTG00000022588) #35	DAPL1 (ENSTMTG00000022598) #36	TANC1 (ENSTMTG00000022600) #37	ENSTMTG00000022604	WDSUB1 (ENSTMTG00000022605)	BAZ2B (ENSTMTG00000022610)	MARCHF7 (ENSTMTG00000022621)	CD302 (ENSTMTG00000022625)	LY75 (ENSTMTG00000022629)
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT00530000063734.a #26	ENSGT01010000223933	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Goode s thornscrub tortoise	MODERN SPECIES	2	NMI (ENSGEVG00005020889)	TNFAIP6 (ENSGEVG00005020884)	RIF1 (ENSGEVG00005020864)	NEB (ENSGEVG00005020817) #8	ARL5A (ENSGEVG00005020782) #9	CACNB4 (ENSGEVG00005020734) #10	STAM2 (ENSGEVG00005020687) #11	FMNL2 (ENSGEVG00005020309) #12	PRPF40A (ENSGEVG00005019971) #14	ARL6IP6 (ENSGEVG00005019950) #16	RPRM (ENSGEVG00005019943) #17	GALNT13 (ENSGEVG00005019923) #18	KCNJ3 (ENSGEVG00005019903) #19	ENSGEVG00005019893 #21	ENSGEVG00005019886 #21	GPD2 (ENSGEVG00005019873) #22	ENSGEVG00005019865 #24	ENSGEVG00005019858 #24	CYTIP (ENSGEVG00005019851) #26	ACVR1C (ENSGEVG00005019840) #27	ACVR1 (ENSGEVG00005019831) #30	UPP2 (ENSGEVG00005019811) #31	CCDC148 (ENSGEVG00005019792) #34	ENSGEVG00005019785	PKP4 (ENSGEVG00005019763) #35	DAPL1 (ENSGEVG00005019749) #36	TANC1 (ENSGEVG00005018129) #37	WDSUB1 (ENSGEVG00005017578)	BAZ2B (ENSGEVG00005006977)	MARCHF7 (ENSGEVG00005004908)	ENSGEVG00005004868
Abingdon island giant tortoise	MODERN SPECIES	96															NR4A2 (ENSCABG00000001114) #21	GPD2 (ENSCABG00000000238) #22	ENSCABG00000000166 #24	ENSCABG00000000160 #24	CYTIP (ENSCABG00000000110) #26	ENSCABG00000000105	ACVR1C (ENSCABG00000000050) #27	ACVR1 (ENSCABG00000000038) #30
Chinese turtle	MODERN SPECIES	1244	TNFAIP6 (ENSPSIG00000011601)	RIF1 (ENSPSIG00000012517)	NEB (ENSPSIG00000012844) #8	ARL5A (ENSPSIG00000016095) #9	ENSPSIG00000016101	CACNB4 (ENSPSIG00000016120) #10	STAM2 (ENSPSIG00000017391) #11	FMNL2 (ENSPSIG00000006880) #12	PRPF40A (ENSPSIG00000007197) #14	ENSPSIG00000007594	RPRM (ENSPSIG00000001821) #17	ENSPSIG00000001823	GALNT13 (ENSPSIG00000007606) #18	KCNJ3 (ENSPSIG00000007874) #19	NR4A2 (ENSPSIG00000008054) #21	GPD2 (ENSPSIG00000008060) #22	ENSPSIG00000001829	GALNT5 (ENSPSIG00000008270) #24	ERMN (ENSPSIG00000008413) #25	CYTIP (ENSPSIG00000008417) #26	ACVR1C (ENSPSIG00000009445) #27	ACVR1 (ENSPSIG00000009530) #30
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Episquamata	ANCESTRAL SPECIES		ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Toxicofera	ANCESTRAL SPECIES	10	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d.q #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Elapidae	ANCESTRAL SPECIES		ENSGT00940000157541	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d.q #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b.g #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904.t #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241.n #24	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359.i	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a.m	ENSGT01050000244842.a.b.b.a.a.a	ENSGT01050000244842.a.b.b.a.a.b
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00940000157541	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d.q #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b.g #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904.t #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241.n #24	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359.i	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a.m	ENSGT01050000244842.a.b.b.a.a.a	ENSGT01050000244842.a.b.b.a.a.b
Blue-lipped sea krait	MODERN SPECIES	8601																GPD2 (ENSLLTG00000012706) #22
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000157541	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d.q #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b.g #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904.t #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241.n #24	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359.i	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a.m	ENSGT01050000244842.a.b.b.a.a.a	ENSGT01050000244842.a.b.b.a.a.b
Eastern brown snake	MODERN SPECIES	7	TNFAIP6 (ENSPTXG00000012986)	RIF1 (ENSPTXG00000012982)	NEB (ENSPTXG00000012187) #8	ARL5A (ENSPTXG00000012173) #9	CACNB4 (ENSPTXG00000009947) #10	STAM2 (ENSPTXG00000009936) #11	FMNL2 (ENSPTXG00000006737) #12	PRPF40A (ENSPTXG00000006720) #14	ARL6IP6 (ENSPTXG00000006719) #16	RPRM (ENSPTXG00000006718) #17	GALNT13 (ENSPTXG00000006717) #18	ENSPTXG00000006716 #19	ENSPTXG00000006715 #19	ENSPTXG00000006714	NR4A2 (ENSPTXG00000006713) #21	GPD2 (ENSPTXG00000006621) #22	GALNT5 (ENSPTXG00000006617) #24	CYTIP (ENSPTXG00000006616) #26	ACVR1C (ENSPTXG00000005857) #27	ACVR1 (ENSPTXG00000010471) #30	UPP2 (ENSPTXG00000010469) #31	CCDC148 (ENSPTXG00000010468) #34	PKP4 (ENSPTXG00000010467) #35	TANC1 (ENSPTXG00000010462) #37	WDSUB1 (ENSPTXG00000010461)	BAZ2B (ENSPTXG00000009497)	MARCHF7 (ENSPTXG00000009496)	CD302 (ENSPTXG00000009495)	LY75 (ENSPTXG00000009492)	PLA2R1 (ENSPTXG00000009488)	ITGB6 (ENSPTXG00000009486)
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	62														ENSNSUG00000020537	ENSNSUG00000020536 #21	ENSNSUG00000020534 #22	ENSNSUG00000020533 #24	ENSNSUG00000020532 #27	ENSNSUG00000020531 #30	ENSNSUG00000020529 #31	ENSNSUG00000020528 #35	ENSNSUG00000020527 #36	ENSNSUG00000020526 #37	ENSNSUG00000020525	ENSNSUG00000020524	ENSNSUG00000020523	ENSNSUG00000020522	ENSNSUG00000020521	CD302 (ENSNSUG00000020520)	ENSNSUG00000020519	ENSNSUG00000020518
Mainland tiger snake	MODERN SPECIES	63														ENSNSUG00000020587	ENSNSUG00000020586 #21	ENSNSUG00000020585 #22	ENSNSUG00000020584 #24	ENSNSUG00000020583 #27	ENSNSUG00000020582 #30	ENSNSUG00000020581 #31	CCDC148 (ENSNSUG00000020580) #34	ENSNSUG00000020579 #35	ENSNSUG00000020578 #35	ENSNSUG00000020577 #36	ENSNSUG00000020576 #37	ENSNSUG00000020575	ENSNSUG00000020574	ENSNSUG00000020573	ENSNSUG00000020572	ENSNSUG00000020570	ENSNSUG00000020569
Indian cobra	MODERN SPECIES		NMI (ENSNNAG00000019069)	TNFAIP6 (ENSNNAG00000019067)	NEB (ENSNNAG00000018647) #8	ARL5A (ENSNNAG00000018385) #9	CACNB4 (ENSNNAG00000018360) #10	STAM2 (ENSNNAG00000018344) #11	FMNL2 (ENSNNAG00000018336) #12	ARL6IP6 (ENSNNAG00000018331) #16	ENSNNAG00000018328	ENSNNAG00000018325	ENSNNAG00000018324 #17	ENSNNAG00000018322 #17	GALNT13 (ENSNNAG00000018312) #18	KCNJ3 (ENSNNAG00000018307) #19	NR4A2 (ENSNNAG00000018303) #21	GPD2 (ENSNNAG00000018298) #22	ENSNNAG00000018296 #24	CYTIP (ENSNNAG00000018295) #26	ACVR1C (ENSNNAG00000018291) #27	ACVR1 (ENSNNAG00000018290) #30	UPP2 (ENSNNAG00000018288) #31	CCDC148 (ENSNNAG00000018282) #34	PKP4 (ENSNNAG00000018276) #35	DAPL1 (ENSNNAG00000018273) #36	TANC1 (ENSNNAG00000018263) #37	WDSUB1 (ENSNNAG00000018254)	BAZ2B (ENSNNAG00000016524)	MARCHF7 (ENSNNAG00000016265)	CD302 (ENSNNAG00000016249)	LY75 (ENSNNAG00000015800)	PLA2R1 (ENSNNAG00000015384)
Lizard	MODERN SPECIES	868												KCNJ3 (ENSACAG00000022462) #19	ENSACAG00000043493	ENSACAG00000038609	NR4A2 (ENSACAG00000007997) #21	GPD2 (ENSACAG00000007854) #22	GALNT5 (ENSACAG00000007780) #24	ERMN (ENSACAG00000007779) #25	CYTIP (ENSACAG00000039761) #26	ENSACAG00000042645 #27	ACVR1 (ENSACAG00000007562) #30
Laterata	ANCESTRAL SPECIES	2	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT01090000260082.d.a.a.a.b #25	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a	ENSGT01050000244842.a.b.b.a.a.a
Argentine black and white tegu	MODERN SPECIES	20	TNFAIP6 (ENSSMRG00000023455)	RIF1 (ENSSMRG00000023454)	NEB (ENSSMRG00000023318) #8	ARL5A (ENSSMRG00000023317) #9	CACNB4 (ENSSMRG00000023315) #10	STAM2 (ENSSMRG00000023314) #11	FMNL2 (ENSSMRG00000023312) #12	PRPF40A (ENSSMRG00000023310) #14	ARL6IP6 (ENSSMRG00000023309) #16	RPRM (ENSSMRG00000023307) #17	ENSSMRG00000023304	ENSSMRG00000023303	GALNT13 (ENSSMRG00000023302) #18	KCNJ3 (ENSSMRG00000023300) #19	NR4A2 (ENSSMRG00000023298) #21	GPD2 (ENSSMRG00000023297) #22	GALNT5 (ENSSMRG00000023296) #24	ENSSMRG00000023295	ACVR1C (ENSSMRG00000023294) #27	ACVR1 (ENSSMRG00000023293) #30	UPP2 (ENSSMRG00000023292) #31	CCDC148 (ENSSMRG00000023291) #34	PKP4 (ENSSMRG00000023290) #35	DAPL1 (ENSSMRG00000023288) #36	TANC1 (ENSSMRG00000023285) #37	WDSUB1 (ENSSMRG00000023284)	BAZ2B (ENSSMRG00000023282)	MARCHF7 (ENSSMRG00000023281)	CD302 (ENSSMRG00000023280)	LY75 (ENSSMRG00000023279)	ENSSMRG00000023278
Common wall lizard	MODERN SPECIES		RIF1 (ENSPMRG00000001812)	NEB (ENSPMRG00000002804) #8	ARL5A (ENSPMRG00000007032) #9	CACNB4 (ENSPMRG00000007056) #10	STAM2 (ENSPMRG00000007098) #11	FMNL2 (ENSPMRG00000007265) #12	PRPF40A (ENSPMRG00000007825) #14	ARL6IP6 (ENSPMRG00000008504) #16	ENSPMRG00000008510	RPRM (ENSPMRG00000008513) #17	ENSPMRG00000008519 #18	ENSPMRG00000008525 #18	KCNJ3 (ENSPMRG00000008530) #19	ENSPMRG00000008534	NR4A2 (ENSPMRG00000008539) #21	GPD2 (ENSPMRG00000008548) #22	GALNT5 (ENSPMRG00000008562) #24	ERMN (ENSPMRG00000008582) #25	CYTIP (ENSPMRG00000008589) #26	ACVR1C (ENSPMRG00000008595) #27	ACVR1 (ENSPMRG00000008601) #30	UPP2 (ENSPMRG00000008608) #31	CCDC148 (ENSPMRG00000008622) #34	PKP4 (ENSPMRG00000008639) #35	DAPL1 (ENSPMRG00000008676) #36	TANC1 (ENSPMRG00000008679) #37	WDSUB1 (ENSPMRG00000008705)	BAZ2B (ENSPMRG00000008725)	MARCHF7 (ENSPMRG00000008793)	CD302 (ENSPMRG00000008807)	LY75 (ENSPMRG00000008837)
tuatara	MODERN SPECIES	1147															NR4A2 (ENSSPUG00000006482) #21	GPD2 (ENSSPUG00000006454) #22
Anura	ANCESTRAL SPECIES	7	ENSGT00530000063686.a.a	ENSGT00940000154311.a.b.o.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d #8	ENSGT00940000154714 #9	ENSGT00950000182837.b.b #10	ENSGT00940000157055 #11	ENSGT00940000155515.a.b.b #12	ENSGT00930000150980.a #14	ENSGT00390000009987 #16	ENSGT00390000010523.c.b #17	ENSGT00940000158904 #18	ENSGT01080000257365.b.a.a.b.a #19	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #24	ENSGT00940000170556	ENSGT00530000063734.a #26	ENSGT00940000158842 #27	ENSGT00940000160160 #30	ENSGT00940000161094 #31	ENSGT00940000153988.A #34	ENSGT00940000155773.b #35	ENSGT00940000154574.d #36	ENSGT00940000155655.B #37	ENSGT00940000157230	ENSGT00940000155359	ENSGT00940000179573	ENSGT00530000063836.a	ENSGT01050000244842.a.b.a
Leishan spiny toad	MODERN SPECIES	10	ARL5A (ENSLLEG00000014229) #9	CACNB4 (ENSLLEG00000014323) #10	STAM2 (ENSLLEG00000014859) #11	FMNL2 (ENSLLEG00000015047) #12	PRPF40A (ENSLLEG00000016291) #14	ARL6IP6 (ENSLLEG00000016833) #16	ENSLLEG00000016903	ENSLLEG00000016932	RPRM (ENSLLEG00000016959) #17	GALNT13 (ENSLLEG00000017026) #18	ENSLLEG00000017970	KCNJ3 (ENSLLEG00000017995) #19	ENSLLEG00000018048	ENSLLEG00000018066	NR4A2 (ENSLLEG00000018085) #21	GPD2 (ENSLLEG00000018186) #22	GALNT5 (ENSLLEG00000018644) #24	ENSLLEG00000018737	ENSLLEG00000018763	CYTIP (ENSLLEG00000018811) #26	ENSLLEG00000018976	ACVR1C (ENSLLEG00000019000) #27	ENSLLEG00000019165	ACVR1 (ENSLLEG00000019218) #30	ENSLLEG00000019342	UPP2 (ENSLLEG00000019364) #31	ENSLLEG00000019415	ENSLLEG00000019439	CCDC148 (ENSLLEG00000019476) #34	PKP4 (ENSLLEG00000019677) #35	ENSLLEG00000021280
Frog	MODERN SPECIES	9	ENSXETG00000049120	tnfaip6 (ENSXETG00000004529)	nr5a1 (ENSXETG00000004530)	kcne3 (ENSXETG00000004531) #8	arl5a (ENSXETG00000021692) #9	cacnb4 (ENSXETG00000021694) #10	stam2 (ENSXETG00000021702) #11	fmnl2 (ENSXETG00000021703) #12	prpf40a (ENSXETG00000021713) #14	arl6ip6 (ENSXETG00000029993) #16	rprm (ENSXETG00000047739) #17	ENSXETG00000046799	galnt13 (ENSXETG00000021716) #18	kcnj3 (ENSXETG00000021717) #19	nr4a2 (ENSXETG00000031753) #21	gpd2 (ENSXETG00000024015) #22	galnt5 (ENSXETG00000037780) #24	cytip (ENSXETG00000035299) #26	acvr1c (ENSXETG00000010381) #27	acvr1 (ENSXETG00000010380) #30	upp2 (ENSXETG00000010379) #31	ccdc148 (ENSXETG00000010377) #34	pkp4 (ENSXETG00000010376) #35	dapl1 (ENSXETG00000038568) #36	ENSXETG00000044846	tanc1 (ENSXETG00000007592) #37	wdsub1 (ENSXETG00000007589)	baz2b (ENSXETG00000007584)	ENSXETG00000047939	marchf7 (ENSXETG00000007583)	ENSXETG00000031853