Gnathostomata ANCESTRAL SPECIES 1485 ENSGT00390000007552 #22 ENSGT00940000165073 Euteleostomi ANCESTRAL SPECIES 164 ENSGT00940000159084 ENSGT00390000017627.a ENSGT00390000000083.a ENSGT00940000160910 ENSGT00950000183096.a.a.d ENSGT00940000167863 ENSGT00940000158843 ENSGT00940000155823.B ENSGT00500000044929 ENSGT00940000156126 ENSGT00940000153168.B ENSGT00510000047676 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000165200 ENSGT00390000008848 ENSGT00390000014512 ENSGT00950000183195.b.b ENSGT00940000160678.b ENSGT00940000159934 Sarcopterygii ANCESTRAL SPECIES 7 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00940000159887 ENSGT00940000157501 ENSGT00390000012412 ENSGT00940000155720 ENSGT00390000010349.a.a ENSGT00940000154045.b ENSGT00940000160944 ENSGT00950000183136.a.b ENSGT00530000063867.a.b ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000165200 ENSGT00950000183059.b.a.a ENSGT00940000157058 ENSGT00940000155092.a ENSGT00940000158752 ENSGT00390000004842 ENSGT00390000015553.a.b ENSGT00940000155691.d ENSGT00510000048283.d ENSGT00940000159075.A ENSGT00390000001610 ENSGT00940000157035 ENSGT00390000002089.b ENSGT00940000153463.a Tetrapoda ANCESTRAL SPECIES 69 ENSGT00940000160310 ENSGT00940000160341 ENSGT00390000018173 ENSGT00940000155559.a.b ENSGT00940000161083 ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852 ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000165200 Amniota ANCESTRAL SPECIES 112 ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Mammalia ANCESTRAL SPECIES 9 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00950000182990.a.a.b.a.b ##33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 Theria ANCESTRAL SPECIES 8 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 Eutheria ANCESTRAL SPECIES 3 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.a ##25 ENSGT00530000063866 ENSGT00390000013802.v.b #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 Primates ANCESTRAL SPECIES ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.b #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 Strepsirrhini ANCESTRAL SPECIES 20 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.b #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Bushbaby MODERN SPECIES 255 GNG3 (ENSOGAG00000034224) #7 BSCL2 (ENSOGAG00000025056) #8 LRRN4CL (ENSOGAG00000031003) #9 UBXN1 (ENSOGAG00000011411) #10 UQCC3 (ENSOGAG00000028729) #11 LBHD1 (ENSOGAG00000025205) #12 CSKMT (ENSOGAG00000024258) #13 C11orf98 (ENSOGAG00000033103) #14 INTS5 (ENSOGAG00000032704) #15 GANAB (ENSOGAG00000011407) #16 B3GAT3 (ENSOGAG00000011405) #17 ROM1 (ENSOGAG00000032235) #18 EML3 (ENSOGAG00000000836) #19 MTA2 (ENSOGAG00000000833) #20 TUT1 (ENSOGAG00000000828) #21 EEF1G (ENSOGAG00000000827) #22 ENSOGAG00000031813 #23 ASRGL1 (ENSOGAG00000000405) #24 SCGB2A1 (ENSOGAG00000013831) #25 ENSOGAG00000030358 #26 INCENP (ENSOGAG00000012974) #27 ENSOGAG00000025354 #28 BEST1 (ENSOGAG00000026226) #29 RAB3IL1 (ENSOGAG00000004501) #30 FADS3 (ENSOGAG00000028613) #31 FADS2 (ENSOGAG00000004500) #32 FADS1 (ENSOGAG00000010794) #33 FEN1 (ENSOGAG00000024238) #34 TMEM258 (ENSOGAG00000010793) #35 MYRF (ENSOGAG00000010786) #36 DAGLA (ENSOGAG00000012574) #37 Lemuriformes ANCESTRAL SPECIES 14 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.b #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Mouse lemur MODERN SPECIES 27 TTC9C (ENSMICG00000042013) HNRNPUL2 (ENSMICG00000009943) GNG3 (ENSMICG00000028299) #7 ENSMICG00000033250 #8 UBXN1 (ENSMICG00000009925) #10 UQCC3 (ENSMICG00000026609) #11 CSKMT (ENSMICG00000038782) #13 LBHD1 (ENSMICG00000042954) #12 INTS5 (ENSMICG00000009907) #15 GANAB (ENSMICG00000009890) #16 B3GAT3 (ENSMICG00000009885) #17 ROM1 (ENSMICG00000041920) #18 EML3 (ENSMICG00000009866) #19 MTA2 (ENSMICG00000044141) #20 TUT1 (ENSMICG00000009841) #21 EEF1G (ENSMICG00000009834) #22 ENSMICG00000031530 #23 SCGB1A1 (ENSMICG00000041999) ASRGL1 (ENSMICG00000047676) #24 SCGB2A1 (ENSMICG00000003206) #25 ENSMICG00000047195 INCENP (ENSMICG00000005864) #27 ENSMICG00000044535 ENSMICG00000031901 ENSMICG00000035165 ##28 BEST1 (ENSMICG00000005843) #29 RAB3IL1 (ENSMICG00000005824) #30 FADS3 (ENSMICG00000032887) #31 FADS2 (ENSMICG00000004145) #32 FADS1 (ENSMICG00000013915) #33 ENSMICG00000029413 Lemuriformes_a ANCESTRAL SPECIES 3 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.b #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Coquerels sifaka MODERN SPECIES 124 TTC9C (ENSPCOG00000017839) HNRNPUL2 (ENSPCOG00000013502) GNG3 (ENSPCOG00000017973) #7 BSCL2 (ENSPCOG00000015043) #8 UBXN1 (ENSPCOG00000019984) #10 UQCC3 (ENSPCOG00000019522) #11 CSKMT (ENSPCOG00000016342) #13 ENSPCOG00000014134 #14 INTS5 (ENSPCOG00000023497) #15 GANAB (ENSPCOG00000014717) #16 B3GAT3 (ENSPCOG00000008969) #17 ROM1 (ENSPCOG00000027824) #18 EML3 (ENSPCOG00000015725) #19 MTA2 (ENSPCOG00000022200) #20 TUT1 (ENSPCOG00000017464) #21 EEF1G (ENSPCOG00000015966) #22 ENSPCOG00000028630 #23 ENSPCOG00000028633 ##23 SCGB1A1 (ENSPCOG00000028635) ASRGL1 (ENSPCOG00000028628) #24 SCGB2A1 (ENSPCOG00000028625) #25 Greater bamboo lemur MODERN SPECIES 101 HNRNPUL2 (ENSPSMG00000022973) GNG3 (ENSPSMG00000022948) #7 BSCL2 (ENSPSMG00000022881) #8 LRRN4CL (ENSPSMG00000022803) #9 UBXN1 (ENSPSMG00000022794) #10 UQCC3 (ENSPSMG00000022737) #11 CSKMT (ENSPSMG00000022734) #13 LBHD1 (ENSPSMG00000022723) #12 INTS5 (ENSPSMG00000022709) #15 GANAB (ENSPSMG00000022613) #16 B3GAT3 (ENSPSMG00000022369) #17 ROM1 (ENSPSMG00000022362) #18 EML3 (ENSPSMG00000022351) #19 MTA2 (ENSPSMG00000022318) #20 TUT1 (ENSPSMG00000022289) #21 EEF1G (ENSPSMG00000022280) #22 ENSPSMG00000022263 ##23 SCGB1A1 (ENSPSMG00000022253) ASRGL1 (ENSPSMG00000022249) #24 ENSPSMG00000022241 #25 ENSPSMG00000022239 INCENP (ENSPSMG00000022199) #27 ENSPSMG00000022147 ##28 BEST1 (ENSPSMG00000022118) #29 RAB3IL1 (ENSPSMG00000022098) #30 FADS3 (ENSPSMG00000021967) #31 FADS2 (ENSPSMG00000021745) #32 FADS1 (ENSPSMG00000021668) #33 ENSPSMG00000021638 ENSPSMG00000021632 FEN1 (ENSPSMG00000021625) #34 Haplorrhini DUPLICATION Haplorrhini DUPLICATION Haplorrhini ANCESTRAL SPECIES ENSGT00390000007552.f.w.a #22 Simiiformes ANCESTRAL SPECIES ENSGT00390000007552.f.w.a #22 Platyrrhini ANCESTRAL SPECIES ENSGT00390000007552.f.w.a #22 Mas night monkey MODERN SPECIES 925 CHRDL1 (ENSANAG00000021596) PAK3 (ENSANAG00000037154) CAPN6 (ENSANAG00000038219) DCX (ENSANAG00000036270) SERTM2 (ENSANAG00000001590) ALG13 (ENSANAG00000027292) TRPC5 (ENSANAG00000034028) LHFPL1 (ENSANAG00000033553) AMOT (ENSANAG00000020413) ENSANAG00000038242 HTR2C (ENSANAG00000029302) IL13RA2 (ENSANAG00000038042) LRCH2 (ENSANAG00000032964) ENSANAG00000025092 PLS3 (ENSANAG00000035343) ENSANAG00000023051 #22 ENSANAG00000019875 Cebidae ANCESTRAL SPECIES ENSGT00390000007552.f.w.a #22 Cebidae_a ANCESTRAL SPECIES 90 ENSGT00950000182988.a.b.b.b ENSGT00940000156128.b ENSGT00940000161570.a ENSGT00950000183232 ENSGT00510000047120.f ENSGT00940000159922.b ENSGT01060000248594.e.a ENSGT00990000203589.a.b.a.b ENSGT00940000159055 ENSGT00940000158041.c.b ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00990000204264 ENSGT00950000183097.a.a.a ENSGT00390000007552.f.w.a #22 Capuchin MODERN SPECIES 534 ENSCCAG00000024001 HTR2C (ENSCCAG00000033885) IL13RA2 (ENSCCAG00000026227) LRCH2 (ENSCCAG00000027902) ENSCCAG00000026741 PLS3 (ENSCCAG00000025264) ENSCCAG00000019627 #22 Tarsier MODERN SPECIES 6571 PDCD6IP (ENSTSYG00000012850) ENSTSYG00000037581 #22 CLASP2 (ENSTSYG00000009193) ENSTSYG00000000705 FBXL2 (ENSTSYG00000000704) SUSD5 (ENSTSYG00000009115) GLB1 (ENSTSYG00000014019) TRIM71 (ENSTSYG00000033433) Haplorrhini ANCESTRAL SPECIES ENSGT00390000007552.f.w.b #22 Simiiformes ANCESTRAL SPECIES ENSGT00390000007552.f.w.b #22 Platyrrhini ANCESTRAL SPECIES ENSGT00390000007552.f.w.b #22 Cebidae ANCESTRAL SPECIES ENSGT00390000007552.f.w.b #22 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390 ENSGT00880000138031.j ENSGT00940000158202 ENSGT00400000022323 ENSGT00390000007552.f.w.b #22 ENSGT00940000160319 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b ENSGT00940000154107.b ENSGT00530000064234.c ENSGT00390000001138.b Bolivian squirrel monkey MODERN SPECIES 56 NOP58 (ENSSBOG00000020494) ENSSBOG00000030624 KIAA2012 (ENSSBOG00000034494) FZD7 (ENSSBOG00000013896) CDK15 (ENSSBOG00000023266) ALS2 (ENSSBOG00000026070) MPP4 (ENSSBOG00000032446) TMEM237 (ENSSBOG00000028677) C2CD6 (ENSSBOG00000024027) ENSSBOG00000022018 STRADB (ENSSBOG00000028914) TRAK2 (ENSSBOG00000027410) ENSSBOG00000024387 FLACC1 (ENSSBOG00000032227) CASP8 (ENSSBOG00000027346) ENSSBOG00000021837 #22 CASP10 (ENSSBOG00000023212) CFLAR (ENSSBOG00000020876) NDUFB3 (ENSSBOG00000023814) HYCC2 (ENSSBOG00000033197) ENSSBOG00000025751 NIF3L1 (ENSSBOG00000034561) ENSSBOG00000028593 CLK1 (ENSSBOG00000031614) BZW1 (ENSSBOG00000020710) ENSSBOG00000034034 AOX1 (ENSSBOG00000032424) SGO2 (ENSSBOG00000035222) KCTD18 (ENSSBOG00000031520) SPATS2L (ENSSBOG00000031853) MAIP1 (ENSSBOG00000033061) Capuchin MODERN SPECIES 178 C2CD6 (ENSCCAG00000028522) STRADB (ENSCCAG00000020333) TRAK2 (ENSCCAG00000020610) FLACC1 (ENSCCAG00000026901) ENSCCAG00000018015 #22 CASP8 (ENSCCAG00000028402) CASP10 (ENSCCAG00000024459) CFLAR (ENSCCAG00000033389) NDUFB3 (ENSCCAG00000033888) FAM126B (ENSCCAG00000029565) ORC2 (ENSCCAG00000000270) NIF3L1 (ENSCCAG00000020100) PPIL3 (ENSCCAG00000019393) CLK1 (ENSCCAG00000021387) BZW1 (ENSCCAG00000012616) ENSCCAG00000028426 AOX1 (ENSCCAG00000025414) SGO2 (ENSCCAG00000032369) KCTD18 (ENSCCAG00000023011) SPATS2L (ENSCCAG00000033886) Haplorrhini ANCESTRAL SPECIES ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.a ##25 ENSGT00390000013802.v.b #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##28 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Simiiformes ANCESTRAL SPECIES ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.a ##25 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Platyrrhini ANCESTRAL SPECIES 15 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a.i #24 ENSGT00950000183045.A.a.a.j #24 ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 336 TTC9C (ENSANAG00000030687) HNRNPUL2 (ENSANAG00000027153) GNG3 (ENSANAG00000028934) #7 ENSANAG00000037042 #8 UBXN1 (ENSANAG00000027543) #10 UQCC3 (ENSANAG00000035176) #11 CSKMT (ENSANAG00000028032) #13 LBHD1 (ENSANAG00000036011) #12 INTS5 (ENSANAG00000028879) #15 GANAB (ENSANAG00000007532) #16 B3GAT3 (ENSANAG00000035998) #17 ROM1 (ENSANAG00000035173) #18 EML3 (ENSANAG00000024070) #19 MTA2 (ENSANAG00000021803) #20 TUT1 (ENSANAG00000029063) #21 ENSANAG00000024873 #22 ENSANAG00000034540 #23 SCGB1A1 (ENSANAG00000027981) ENSANAG00000036672 #24 ENSANAG00000033173 #24 SCGB1D4 (ENSANAG00000035813) ENSANAG00000032810 SCGB2A2 (ENSANAG00000030356) ##25 SCGB1D2 (ENSANAG00000023403) SCGB2A1 (ENSANAG00000023243) #25 SCGB1D1 (ENSANAG00000037619) INCENP (ENSANAG00000035094) #27 ENSANAG00000032960 ##28 BEST1 (ENSANAG00000037419) #29 RAB3IL1 (ENSANAG00000035875) #30 FADS3 (ENSANAG00000022958) #31 Mas night monkey MODERN SPECIES 522 ENSANAG00000027676 ENSANAG00000028737 PCYOX1 (ENSANAG00000023649) TIA1 (ENSANAG00000026081) C2orf42 (ENSANAG00000034166) ENSANAG00000023938 ASPRV1 (ENSANAG00000035270) MXD1 (ENSANAG00000026938) ENSANAG00000036286 ENSANAG00000024344 ANXA4 (ENSANAG00000024621) ENSANAG00000034087 ENSANAG00000026342 ENSANAG00000006625 #22 AAK1 (ENSANAG00000022992) NFU1 (ENSANAG00000022679) GFPT1 (ENSANAG00000022514) ANTXR1 (ENSANAG00000027848) GKN1 (ENSANAG00000022751) GKN2 (ENSANAG00000033190) BMP10 (ENSANAG00000029195) Cebidae DUPLICATION Cebidae DUPLICATION Cebidae ANCESTRAL SPECIES ENSGT00390000007552.f.x.c.a #22 Cebidae_a ANCESTRAL SPECIES 18 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.c.b #22 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a.i #24 ENSGT00390000007552.f.x.c.a #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000183316 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Bolivian squirrel monkey MODERN SPECIES 42 TTC9C (ENSSBOG00000023530) HNRNPUL2 (ENSSBOG00000026780) GNG3 (ENSSBOG00000015839) #7 BSCL2 (ENSSBOG00000017621) #8 ENSSBOG00000035227 #10 UQCC3 (ENSSBOG00000032621) #11 CSKMT (ENSSBOG00000030424) #13 LBHD1 (ENSSBOG00000022501) #12 INTS5 (ENSSBOG00000033783) #15 GANAB (ENSSBOG00000031512) #16 B3GAT3 (ENSSBOG00000034134) #17 ROM1 (ENSSBOG00000021679) #18 EML3 (ENSSBOG00000028020) #19 MTA2 (ENSSBOG00000020111) #20 TUT1 (ENSSBOG00000003827) #21 ENSSBOG00000029342 #22 ENSSBOG00000014296 ##23 SCGB1A1 (ENSSBOG00000018756) ASRGL1 (ENSSBOG00000014673) #24 ENSSBOG00000029423 SCGB1D4 (ENSSBOG00000025179) ENSSBOG00000017764 SCGB2A2 (ENSSBOG00000028742) ##25 SCGB1D2 (ENSSBOG00000010503) SCGB2A1 (ENSSBOG00000013372) #25 SCGB1D1 (ENSSBOG00000029702) INCENP (ENSSBOG00000013254) #27 ENSSBOG00000015673 FTH1 (ENSSBOG00000027832) ##28 BEST1 (ENSSBOG00000027813) #29 RAB3IL1 (ENSSBOG00000030643) #30 Marmoset MODERN SPECIES 11 CATSPER3 (ENSCJAG00000005799) PITX1 (ENSCJAG00000086657) MACROH2A1 (ENSCJAG00000005818) TIFAB (ENSCJAG00000043900) CXCL14 (ENSCJAG00000005888) SLC25A48 (ENSCJAG00000005904) IL9 (ENSCJAG00000005916) ENSCJAG00000041175 LECT2 (ENSCJAG00000043329) TGFBI (ENSCJAG00000005930) SMAD5 (ENSCJAG00000005968) SMIM32 (ENSCJAG00000005981) TRPC7 (ENSCJAG00000005983) SPOCK1 (ENSCJAG00000006070) KLHL3 (ENSCJAG00000006075) ENSCJAG00000006131 #22 MYOT (ENSCJAG00000006134) PKD2L2 (ENSCJAG00000006165) FAM13B (ENSCJAG00000006206) ENSCJAG00000006244 NME5 (ENSCJAG00000006262) WNT8A (ENSCJAG00000006245) BRD8 (ENSCJAG00000006280) KIF20A (ENSCJAG00000006393) CDC23 (ENSCJAG00000006418) ENSCJAG00000073473 GFRA3 (ENSCJAG00000006454) CDC25C (ENSCJAG00000082458) ENSCJAG00000055933 FAM53C (ENSCJAG00000048646) KDM3B (ENSCJAG00000006510) Cebidae ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.c.b #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a.i #24 ENSGT00950000183045.A.a.a.j #24 ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Cebidae_a ANCESTRAL SPECIES 18 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.c.b #22 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a.i #24 ENSGT00390000007552.f.x.c.a #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 Capuchin MODERN SPECIES 316 ENSCCAG00000022329 HNRNPUL2 (ENSCCAG00000037674) BSCL2 (ENSCCAG00000026340) #8 GNG3 (ENSCCAG00000030017) #7 UBXN1 (ENSCCAG00000020847) #10 UQCC3 (ENSCCAG00000030092) #11 LBHD1 (ENSCCAG00000025856) #12 ENSCCAG00000037825 #13 INTS5 (ENSCCAG00000030851) #15 GANAB (ENSCCAG00000001747) #16 ENSCCAG00000037727 #17 ROM1 (ENSCCAG00000023216) #18 EML3 (ENSCCAG00000029421) #19 MTA2 (ENSCCAG00000026631) #20 TUT1 (ENSCCAG00000018819) #21 ENSCCAG00000033526 #22 AHNAK (ENSCCAG00000025745) #23 ASRGL1 (ENSCCAG00000024611) #24 ENSCCAG00000022311 #25 SCGB1D2 (ENSCCAG00000033799) SCGB2A1 (ENSCCAG00000030614) #25 SCGB1D1 (ENSCCAG00000032346) INCENP (ENSCCAG00000018638) #27 ENSCCAG00000027979 ##28 BEST1 (ENSCCAG00000022350) #29 RAB3IL1 (ENSCCAG00000023993) #30 FADS3 (ENSCCAG00000036626) #31 FADS2 (ENSCCAG00000020221) #32 ENSCCAG00000036895 FADS1 (ENSCCAG00000034736) #33 FEN1 (ENSCCAG00000024050) #34 Bolivian squirrel monkey MODERN SPECIES 79 ENSSBOG00000020043 HHAT (ENSSBOG00000035340) ENSSBOG00000020597 ENSSBOG00000026679 SERTAD4 (ENSSBOG00000035607) ENSSBOG00000026801 SYT14 (ENSSBOG00000029111) UTP25 (ENSSBOG00000022281) IRF6 (ENSSBOG00000003627) TRAF3IP3 (ENSSBOG00000021891) ENSSBOG00000012130 HSD11B1 (ENSSBOG00000035190) LAMB3 (ENSSBOG00000031511) CAMK1G (ENSSBOG00000027000) PLXNA2 (ENSSBOG00000033258) ENSSBOG00000036095 #22 CD34 (ENSSBOG00000030347) CD46 (ENSSBOG00000019001) CR1L (ENSSBOG00000022625) ENSSBOG00000018205 CR2 (ENSSBOG00000021258) CD55 (ENSSBOG00000023177) ENSSBOG00000013917 C4BPA (ENSSBOG00000030104) C4BPB (ENSSBOG00000021724) PFKFB2 (ENSSBOG00000027447) YOD1 (ENSSBOG00000023276) C1orf116 (ENSSBOG00000032059) FCAMR (ENSSBOG00000019046) PIGR (ENSSBOG00000035980) FCMR (ENSSBOG00000022073) Marmoset MODERN SPECIES 2 GNG3 (ENSCJAG00000069907) #7 BSCL2 (ENSCJAG00000018730) #8 LRRN4CL (ENSCJAG00000047970) #9 UBXN1 (ENSCJAG00000018751) #10 UQCC3 (ENSCJAG00000082326) #11 CSKMT (ENSCJAG00000018816) #13 LBHD1 (ENSCJAG00000018789) #12 ENSCJAG00000075366 INTS5 (ENSCJAG00000018821) #15 GANAB (ENSCJAG00000018826) #16 B3GAT3 (ENSCJAG00000018860) #17 ROM1 (ENSCJAG00000044995) #18 EML3 (ENSCJAG00000018884) #19 MTA2 (ENSCJAG00000018928) #20 TUT1 (ENSCJAG00000033294) #21 ENSCJAG00000018949 #22 ENSCJAG00000072475 ##23 SCGB1A1 (ENSCJAG00000019012) ENSCJAG00000078407 #24 ENSCJAG00000055515 #24 SCGB1D4 (ENSCJAG00000019054) SCGB2A2 (ENSCJAG00000019059) ##25 SCGB1D2 (ENSCJAG00000058578) SCGB2A1 (ENSCJAG00000019050) #25 SCGB1D1 (ENSCJAG00000019048) INCENP (ENSCJAG00000019069) #27 ENSCJAG00000047003 ##28 BEST1 (ENSCJAG00000019095) #29 RAB3IL1 (ENSCJAG00000019137) #30 ENSCJAG00000046538 FADS2 (ENSCJAG00000019168) #32 Cebidae ANCESTRAL SPECIES ENSGT00390000007552.f.x.d #22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000007552.f.x.d #22 Capuchin DUPLICATION Capuchin MODERN SPECIES 46 FER (ENSCCAG00000029167) PJA2 (ENSCCAG00000020652) ENSCCAG00000036031 MAN2A1 (ENSCCAG00000019187) ENSCCAG00000031412 TMEM232 (ENSCCAG00000002879) SLC25A46 (ENSCCAG00000032689) TSLP (ENSCCAG00000022617) WDR36 (ENSCCAG00000035644) CAMK4 (ENSCCAG00000029501) STARD4 (ENSCCAG00000029489) ENSCCAG00000030010 ENSCCAG00000035385 NREP (ENSCCAG00000002167) EPB41L4A (ENSCCAG00000034780) ENSCCAG00000033143 #22 ENSCCAG00000026026 APC (ENSCCAG00000032289) SRP19 (ENSCCAG00000035651) REEP5 (ENSCCAG00000033540) DCP2 (ENSCCAG00000034353) TSSK1B (ENSCCAG00000035371) MCC (ENSCCAG00000036065) YTHDC2 (ENSCCAG00000037613) Capuchin MODERN SPECIES 11 GPRC6A (ENSCCAG00000030003) RFX6 (ENSCCAG00000019715) VGLL2 (ENSCCAG00000028036) ROS1 (ENSCCAG00000033956) ENSCCAG00000027081 DCBLD1 (ENSCCAG00000025349) ENSCCAG00000028924 ENSCCAG00000024292 NUS1 (ENSCCAG00000020694) DYDC2 (ENSCCAG00000028493) DYDC1 (ENSCCAG00000026278) MAT1A (ENSCCAG00000021786) ANXA11 (ENSCCAG00000037639) PLAC9 (ENSCCAG00000026257) TMEM254 (ENSCCAG00000021130) ENSCCAG00000028226 #22 ENSCCAG00000021547 SFTPD (ENSCCAG00000025815) ENSCCAG00000003281 ZCCHC24 (ENSCCAG00000031702) PPIF (ENSCCAG00000023235) ZMIZ1 (ENSCCAG00000028934) ENSCCAG00000033731 POLR3A (ENSCCAG00000032995) DLG5 (ENSCCAG00000023904) ENSCCAG00000022279 ENSCCAG00000021193 KCNMA1 (ENSCCAG00000036045) LRMDA (ENSCCAG00000019485) ZNF503 (ENSCCAG00000036982) ENSCCAG00000023847 Capuchin MODERN SPECIES 19 WDR93 (ENSCCAG00000032328) PEX11A (ENSCCAG00000036277) PLIN1 (ENSCCAG00000035870) KIF7 (ENSCCAG00000033647) ENSCCAG00000025798 TICRR (ENSCCAG00000020179) RHCG (ENSCCAG00000025755) POLG (ENSCCAG00000007512) FANCI (ENSCCAG00000025718) RLBP1 (ENSCCAG00000005991) ABHD2 (ENSCCAG00000025237) ZNF774 (ENSCCAG00000019513) ENSCCAG00000035117 VPS33B (ENSCCAG00000023465) SV2B (ENSCCAG00000033612) ENSCCAG00000037846 #22 SLCO3A1 (ENSCCAG00000033566) ST8SIA2 (ENSCCAG00000028872) FAM174B (ENSCCAG00000028052) ENSCCAG00000027689 CHD2 (ENSCCAG00000035304) RGMA (ENSCCAG00000002095) MCTP2 (ENSCCAG00000025750) ENSCCAG00000034983 NR2F2 (ENSCCAG00000023106) ENSCCAG00000033723 ENSCCAG00000024021 ARRDC4 (ENSCCAG00000020954) ENSCCAG00000037829 PGPEP1L (ENSCCAG00000025538) IGF1R (ENSCCAG00000030475) Catarrhini ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954.k.a #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.c ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000183316 Gibbon DUPLICATION Gibbon MODERN SPECIES 19 HNRNPUL2 (ENSNLEG00000004077) GNG3 (ENSNLEG00000004072) #7 BSCL2 (ENSNLEG00000004058) #8 LRRN4CL (ENSNLEG00000004054) #9 UBXN1 (ENSNLEG00000004041) #10 UQCC3 (ENSNLEG00000035136) #11 CSKMT (ENSNLEG00000004038) #13 LBHD1 (ENSNLEG00000004026) #12 INTS5 (ENSNLEG00000035490) #15 GANAB (ENSNLEG00000003980) #16 B3GAT3 (ENSNLEG00000003956) #17 ROM1 (ENSNLEG00000003950) #18 EML3 (ENSNLEG00000003879) #19 MTA2 (ENSNLEG00000003813) #20 TUT1 (ENSNLEG00000003780) #21 EEF1G (ENSNLEG00000003528) #22 ENSNLEG00000031821 ##23 SCGB1A1 (ENSNLEG00000003507) ASRGL1 (ENSNLEG00000003492) #24 ENSNLEG00000030364 ENSNLEG00000003484 ##25 SCGB1D2 (ENSNLEG00000003481) SCGB2A1 (ENSNLEG00000003471) #25 ENSNLEG00000003463 ENSNLEG00000028720 INCENP (ENSNLEG00000003380) #27 ENSNLEG00000003321 ##28 BEST1 (ENSNLEG00000003280) #29 RAB3IL1 (ENSNLEG00000003273) #30 ENSNLEG00000003139 #31 ENSNLEG00000031350 Gibbon MODERN SPECIES 22 FAT4 (ENSNLEG00000009479) ENSNLEG00000008841 ENSNLEG00000031531 INTU (ENSNLEG00000013556) SLC25A31 (ENSNLEG00000013592) HSPA4L (ENSNLEG00000013603) PLK4 (ENSNLEG00000013679) MFSD8 (ENSNLEG00000013748) ABHD18 (ENSNLEG00000013793) ENSNLEG00000030732 LARP1B (ENSNLEG00000013819) PGRMC2 (ENSNLEG00000013884) JADE1 (ENSNLEG00000013898) SCLT1 (ENSNLEG00000013945) C4orf33 (ENSNLEG00000031979) ENSNLEG00000028478 #22 ENSNLEG00000029937 ENSNLEG00000029766 PCDH10 (ENSNLEG00000013967) PABPC4L (ENSNLEG00000019300) ENSNLEG00000027749 ENSNLEG00000035962 ENSNLEG00000029177 PCDH18 (ENSNLEG00000013976) SLC7A11 (ENSNLEG00000013991) NOCT (ENSNLEG00000014018) ELF2 (ENSNLEG00000014022) MGARP (ENSNLEG00000033771) NDUFC1 (ENSNLEG00000034036) NAA15 (ENSNLEG00000014091) SLC5A4 (ENSNLEG00000014174) Gibbon MODERN SPECIES 3 CADPS2 (ENSNLEG00000012024) ENSNLEG00000030675 SLC13A1 (ENSNLEG00000012101) IQUB (ENSNLEG00000012115) NDUFA5 (ENSNLEG00000030214) ASB15 (ENSNLEG00000012140) LMOD2 (ENSNLEG00000012153) WASL (ENSNLEG00000012159) HYAL4 (ENSNLEG00000012182) SPAM1 (ENSNLEG00000012189) TMEM229A (ENSNLEG00000018603) ENSNLEG00000031959 GPR37 (ENSNLEG00000012200) ENSNLEG00000033858 POT1 (ENSNLEG00000012201) ENSNLEG00000012225 #22 GRM8 (ENSNLEG00000012231) ENSNLEG00000033122 ZNF800 (ENSNLEG00000012232) GCC1 (ENSNLEG00000012234) ENSNLEG00000030696 FSCN3 (ENSNLEG00000012245) PAX4 (ENSNLEG00000012257) SND1 (ENSNLEG00000012263) LRRC4 (ENSNLEG00000035843) LEP (ENSNLEG00000012302) RBM28 (ENSNLEG00000012307) PRRT4 (ENSNLEG00000012335) ENSNLEG00000012341 HILPDA (ENSNLEG00000028127) ENSNLEG00000012368 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954.k.a #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.c ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000183316 Orangutan MODERN SPECIES 2 HNRNPUL2 (ENSPPYG00000029773) GNG3 (ENSPPYG00000003150) #7 BSCL2 (ENSPPYG00000038932) #8 LRRN4CL (ENSPPYG00000003152) #9 UBXN1 (ENSPPYG00000003153) #10 ENSPPYG00000003154 #11 LBHD1 (ENSPPYG00000003155) #12 CSKMT (ENSPPYG00000003156) #13 INTS5 (ENSPPYG00000003157) #15 GANAB (ENSPPYG00000003158) #16 B3GAT3 (ENSPPYG00000025907) #17 ROM1 (ENSPPYG00000003159) #18 EML3 (ENSPPYG00000003160) #19 MTA2 (ENSPPYG00000003161) #20 TUT1 (ENSPPYG00000003162) #21 EEF1G (ENSPPYG00000029434) #22 ENSPPYG00000035391 ##23 SCGB1A1 (ENSPPYG00000003165) ASRGL1 (ENSPPYG00000003166) #24 ENSPPYG00000034057 ENSPPYG00000038729 ENSPPYG00000003168 ##25 SCGB1D2 (ENSPPYG00000003169) SCGB2A1 (ENSPPYG00000003170) #25 SCGB1D1 (ENSPPYG00000025908) INCENP (ENSPPYG00000003171) #27 FTH1 (ENSPPYG00000003173) ##28 BEST1 (ENSPPYG00000003174) #29 ENSPPYG00000003175 #30 FADS3 (ENSPPYG00000003176) #31 FADS2 (ENSPPYG00000003177) #32 Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139.e #16 ENSGT00940000156954.k.a #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.h.a #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.c ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT01030000235462 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139.e #16 ENSGT00940000156954.k.a #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.h.a #22 ENSGT00390000007552.f.x.i #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.c ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 Pan ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139.e #16 ENSGT00940000156954.k.a #17 ENSGT00940000159139.f #16 ENSGT00940000156954.l #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.h.a #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.c ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000183316 Chimpanzee MODERN SPECIES 2 TTC9C (ENSPTRG00000023824) HNRNPUL2 (ENSPTRG00000034359) GNG3 (ENSPTRG00000003783) #7 BSCL2 (ENSPTRG00000003784) #8 UBXN1 (ENSPTRG00000003780) #10 UQCC3 (ENSPTRG00000028607) #11 CSKMT (ENSPTRG00000034411) #13 LBHD1 (ENSPTRG00000049492) #12 INTS5 (ENSPTRG00000003777) #15 GANAB (ENSPTRG00000003776) #16 B3GAT3 (ENSPTRG00000039665) #17 ROM1 (ENSPTRG00000003773) #18 ENSPTRG00000003772 #19 MTA2 (ENSPTRG00000003771) #20 TUT1 (ENSPTRG00000003770) #21 EEF1G (ENSPTRG00000003768) #22 AHNAK (ENSPTRG00000003766) #23 SCGB1A1 (ENSPTRG00000003765) ASRGL1 (ENSPTRG00000003764) #24 ENSPTRG00000047416 SCGB1D4 (ENSPTRG00000050005) SCGB2A2 (ENSPTRG00000003763) ##25 SCGB1D2 (ENSPTRG00000023215) SCGB2A1 (ENSPTRG00000003762) #25 SCGB1D1 (ENSPTRG00000003761) ENSPTRG00000046039 INCENP (ENSPTRG00000003760) #27 ENSPTRG00000050975 ##28 BEST1 (ENSPTRG00000003756) #29 RAB3IL1 (ENSPTRG00000003755) #30 FADS3 (ENSPTRG00000003754) #31 Bonobo MODERN SPECIES 2 ZBTB3 (ENSPPAG00000031673) TTC9C (ENSPPAG00000030010) ENSPPAG00000041471 GNG3 (ENSPPAG00000032105) #7 BSCL2 (ENSPPAG00000042902) #8 UBXN1 (ENSPPAG00000036691) #10 ENSPPAG00000012147 #11 CSKMT (ENSPPAG00000029192) #13 LBHD1 (ENSPPAG00000031864) #12 INTS5 (ENSPPAG00000028305) #15 GANAB (ENSPPAG00000043210) #16 B3GAT3 (ENSPPAG00000016802) #17 ROM1 (ENSPPAG00000035434) #18 EML3 (ENSPPAG00000031717) #19 TUT1 (ENSPPAG00000037200) #21 ENSPPAG00000043560 #22 ENSPPAG00000044021 #23 SCGB1A1 (ENSPPAG00000037115) ASRGL1 (ENSPPAG00000037527) #24 ENSPPAG00000043065 SCGB1D4 (ENSPPAG00000020935) SCGB2A2 (ENSPPAG00000039013) ##25 SCGB1D2 (ENSPPAG00000011860) SCGB2A1 (ENSPPAG00000040636) #25 SCGB1D1 (ENSPPAG00000038178) INCENP (ENSPPAG00000020765) #27 ENSPPAG00000029826 ##28 BEST1 (ENSPPAG00000028859) #29 RAB3IL1 (ENSPPAG00000042430) #30 FADS3 (ENSPPAG00000027798) #31 ENSPPAG00000041561 Gorilla MODERN SPECIES 2 ZBTB3 (ENSGGOG00000011735) TTC9C (ENSGGOG00000011733) HNRNPUL2 (ENSGGOG00000011722) GNG3 (ENSGGOG00000003199) #7 BSCL2 (ENSGGOG00000003195) #8 UBXN1 (ENSGGOG00000005047) #10 ENSGGOG00000027467 #11 CSKMT (ENSGGOG00000027342) #13 LBHD1 (ENSGGOG00000005043) #12 INTS5 (ENSGGOG00000026126) #15 GANAB (ENSGGOG00000013611) #16 EML3 (ENSGGOG00000013581) #19 ROM1 (ENSGGOG00000013599) #18 MTA2 (ENSGGOG00000013570) #20 TUT1 (ENSGGOG00000013564) #21 ENSGGOG00000013557 #22 ENSGGOG00000026177 #23 SCGB1A1 (ENSGGOG00000001795) ENSGGOG00000023746 SCGB1D4 (ENSGGOG00000000819) SCGB2A2 (ENSGGOG00000006347) ##25 SCGB1D2 (ENSGGOG00000026258) SCGB2A1 (ENSGGOG00000022202) #25 SCGB1D1 (ENSGGOG00000015681) ENSGGOG00000041256 INCENP (ENSGGOG00000014193) #27 ENSGGOG00000027722 ##28 BEST1 (ENSGGOG00000011404) #29 ENSGGOG00000012399 #30 FADS3 (ENSGGOG00000012388) #31 ENSGGOG00000037580 Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00940000153901.a.a ENSGT00950000182926.a ENSGT00940000164182.a.b ENSGT00940000154773.o ENSGT00940000153272.a.b.o.a ENSGT00390000002915 ENSGT00940000157992 ENSGT00390000001439 ENSGT00390000000903.a.f.a ENSGT00390000007552.f.x.h.b #22 ENSGT00390000000903.a.f.b.b ENSGT01050000244850.B ENSGT00390000005809.m.b ENSGT00950000183014.f.a.g.b.a.a ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000163415 ENSGT00390000009822 ENSGT00390000016313.a.a ENSGT00510000047602.q.a.a ENSGT00390000002222 ENSGT00940000158082.b ENSGT00940000161666 ENSGT00940000161774 ENSGT00940000160121 Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00940000153901.a.a ENSGT00950000182926.a ENSGT00940000164182.a.b ENSGT00940000154773.o ENSGT00940000153272.a.b.o.a ENSGT00390000002915 ENSGT00940000157992 ENSGT00390000001439 ENSGT00390000000903.a.f.a ENSGT00390000007552.f.x.h.b #22 ENSGT00390000000903.a.f.b.b ENSGT01050000244850.B ENSGT00390000005809.m.b ENSGT00950000183014.f.a.g.b.a.a ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000163415 ENSGT00390000009822 ENSGT00390000016313.a.a ENSGT00510000047602.q.a.a ENSGT00390000002222 ENSGT00940000158082.b ENSGT00940000161666 ENSGT00940000161774 ENSGT00940000160121 Pan ANCESTRAL SPECIES 13 ENSGT00390000000068 ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00940000153901.a.a ENSGT00950000182926.a ENSGT00940000164182.a.b ENSGT00940000154773.o ENSGT00940000153272.a.b.o.a ENSGT00390000002915 ENSGT00940000157992 ENSGT00390000001439 ENSGT00390000007552.f.x.h.b #22 ENSGT00390000000903.a.f.b.b ENSGT01050000244850.B ENSGT00390000005809.m.b ENSGT00950000183014.f.a.g.b.a.a ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000154668.`b ENSGT00940000163415 ENSGT00390000009822 ENSGT00390000016313.a.a ENSGT00510000047602.q.a.a ENSGT00390000002222 ENSGT00940000158082.b ENSGT00940000161666 ENSGT00940000161774 Bonobo MODERN SPECIES 20 STRA8 (ENSPPAG00000019246) WDR91 (ENSPPAG00000043535) ENSPPAG00000041815 TMEM140 (ENSPPAG00000009309) ENSPPAG00000039575 ENSPPAG00000042375 CALD1 (ENSPPAG00000033595) BPGM (ENSPPAG00000028646) AKR1B15 (ENSPPAG00000027085) AKR1B10 (ENSPPAG00000032122) ENSPPAG00000010783 SLC35B4 (ENSPPAG00000036396) LRGUK (ENSPPAG00000026937) EXOC4 (ENSPPAG00000035477) ENSPPAG00000035760 ENSPPAG00000007374 #22 ENSPPAG00000019389 ENSPPAG00000033968 ENSPPAG00000039044 ENSPPAG00000041347 ENSPPAG00000025319 PODXL (ENSPPAG00000033899) MKLN1 (ENSPPAG00000024879) ENSPPAG00000041979 TSGA13 (ENSPPAG00000032619) COPG2 (ENSPPAG00000033454) MEST (ENSPPAG00000042166) CEP41 (ENSPPAG00000027998) CPA1 (ENSPPAG00000038156) CPA5 (ENSPPAG00000028093) CPA4 (ENSPPAG00000024844) Chimpanzee MODERN SPECIES 20 CNOT4 (ENSPTRG00000019727) STRA8 (ENSPTRG00000019726) WDR91 (ENSPTRG00000019725) CYREN (ENSPTRG00000019724) TMEM140 (ENSPTRG00000046203) ENSPTRG00000043525 AGBL3 (ENSPTRG00000019722) CALD1 (ENSPTRG00000019721) BPGM (ENSPTRG00000019720) AKR1B15 (ENSPTRG00000041803) AKR1B10 (ENSPTRG00000019718) AKR1B1 (ENSPTRG00000019716) SLC35B4 (ENSPTRG00000028390) LRGUK (ENSPTRG00000019715) EXOC4 (ENSPTRG00000019712) ENSPTRG00000039432 #22 CHCHD3 (ENSPTRG00000019711) PLXNA4 (ENSPTRG00000041884) ENSPTRG00000045758 ENSPTRG00000043790 PODXL (ENSPTRG00000019705) MKLN1 (ENSPTRG00000022979) ENSPTRG00000044862 KLF14 (ENSPTRG00000019701) TSGA13 (ENSPTRG00000033729) COPG2 (ENSPTRG00000022792) MEST (ENSPTRG00000019698) CEP41 (ENSPTRG00000052638) CPA1 (ENSPTRG00000019696) CPA5 (ENSPTRG00000019695) CPA4 (ENSPTRG00000019694) Gorilla MODERN SPECIES 20 STRA8 (ENSGGOG00000012953) WDR91 (ENSGGOG00000000897) CYREN (ENSGGOG00000000896) TMEM140 (ENSGGOG00000039750) ENSGGOG00000025238 AGBL3 (ENSGGOG00000024585) CALD1 (ENSGGOG00000009728) BPGM (ENSGGOG00000007525) ENSGGOG00000012293 AKR1B10 (ENSGGOG00000026172) AKR1B1 (ENSGGOG00000011731) SLC35B4 (ENSGGOG00000001736) LRGUK (ENSGGOG00000022273) EXOC4 (ENSGGOG00000003951) ENSGGOG00000041288 ENSGGOG00000042744 #22 ENSGGOG00000037349 PLXNA4 (ENSGGOG00000007146) ENSGGOG00000042691 ENSGGOG00000025653 PODXL (ENSGGOG00000000858) MKLN1 (ENSGGOG00000026878) ENSGGOG00000043449 KLF14 (ENSGGOG00000006845) TSGA13 (ENSGGOG00000008987) ENSGGOG00000008981 MEST (ENSGGOG00000000592) CEP41 (ENSGGOG00000002423) CPA1 (ENSGGOG00000002419) CPA5 (ENSGGOG00000002414) CPA4 (ENSGGOG00000040989) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000007552.f.x.i #22 Gorilla MODERN SPECIES 523 CAPN6 (ENSGGOG00000007851) DCX (ENSGGOG00000038714) SERTM2 (ENSGGOG00000036792) ENSGGOG00000037011 ALG13 (ENSGGOG00000010402) TRPC5 (ENSGGOG00000015892) TRPC5OS (ENSGGOG00000040904) LHFPL1 (ENSGGOG00000010356) AMOT (ENSGGOG00000011142) HTR2C (ENSGGOG00000043401) IL13RA2 (ENSGGOG00000012153) LRCH2 (ENSGGOG00000001918) RBMXL3 (ENSGGOG00000027260) ENSGGOG00000028364 PLS3 (ENSGGOG00000008810) ENSGGOG00000043307 #22 ENSGGOG00000026147 ENSGGOG00000039348 AGTR2 (ENSGGOG00000041235) SLC6A14 (ENSGGOG00000010824) CT83 (ENSGGOG00000027593) ENSGGOG00000043839 KLHL13 (ENSGGOG00000025384) WDR44 (ENSGGOG00000003190) DOCK11 (ENSGGOG00000014811) ENSGGOG00000037465 IL13RA1 (ENSGGOG00000014651) ZCCHC12 (ENSGGOG00000044194) ENSGGOG00000000535 LONRF3 (ENSGGOG00000013667) CT47C1 (ENSGGOG00000016359) Homo/Pan group ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139.e #16 ENSGT00940000156954.k.a #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.h.a #22 ENSGT00390000007552.f.x.i #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.c ENSGT00530000063866.c.b ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000183316 Human MODERN SPECIES 2 BSCL2 (ENSG00000168000) #8 LRRN4CL (ENSG00000177363) #9 UBXN1 (ENSG00000162191) #10 UQCC3 (ENSG00000204922) #11 CSKMT (ENSG00000214756) #13 LBHD1 (ENSG00000162194) #12 C11orf98 (ENSG00000278615) #14 ENSG00000255432 INTS5 (ENSG00000185085) #15 GANAB (ENSG00000089597) #16 B3GAT3 (ENSG00000149541) #17 ROM1 (ENSG00000149489) #18 EML3 (ENSG00000149499) #19 MTA2 (ENSG00000149480) #20 TUT1 (ENSG00000149016) #21 EEF1G (ENSG00000254772) #22 AHNAK (ENSG00000124942) #23 SCGB1A1 (ENSG00000149021) ASRGL1 (ENSG00000162174) #24 SCGB1D4 (ENSG00000197745) SCGB2A2 (ENSG00000110484) ##25 SCGB1D2 (ENSG00000124935) SCGB2A1 (ENSG00000124939) #25 SCGB1D1 (ENSG00000168515) INCENP (ENSG00000149503) #27 FTH1 (ENSG00000167996) ##28 BEST1 (ENSG00000167995) #29 RAB3IL1 (ENSG00000167994) #30 FADS3 (ENSG00000221968) #31 FADS1 (ENSG00000149485) #33 FADS2 (ENSG00000134824) #32 Pan ANCESTRAL SPECIES 6 ENSGT00950000183232 ENSGT00940000153336.e.a.a.a.a.f.b ENSGT00390000015797.d.m.a ENSGT00940000159922.b ENSGT01060000248594.e.a ENSGT00390000018248 ENSGT00940000163925 ENSGT00990000203589.a.b.a.b ENSGT00940000159055 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00940000162929.l ENSGT00950000183340 ENSGT00950000183097.a.a.a ENSGT00390000007552.f.x.i #22 ENSGT00390000010991.f.a ENSGT01050000244888.b.a.c.a ENSGT00390000018873.c ENSGT00390000018873.d ENSGT00940000154359.f ENSGT00940000157557.a ENSGT00940000155658.bb.a ENSGT00940000160896 ENSGT01030000234522.C.b.e.a.b.f ENSGT00940000164191.b ENSGT00440000033329.b.a.b ENSGT00390000002253.a ENSGT00940000163031.b.a ENSGT00940000160619 ENSGT00530000064130.c.a.b Bonobo MODERN SPECIES 369 ENSPPAG00000023545 SERTM2 (ENSPPAG00000018021) ENSPPAG00000043040 ALG13 (ENSPPAG00000043832) TRPC5 (ENSPPAG00000034841) ENSPPAG00000033141 LHFPL1 (ENSPPAG00000034666) AMOT (ENSPPAG00000037944) ENSPPAG00000042106 HTR2C (ENSPPAG00000041995) IL13RA2 (ENSPPAG00000037271) LRCH2 (ENSPPAG00000038304) ENSPPAG00000030663 LUZP4 (ENSPPAG00000038050) PLS3 (ENSPPAG00000027382) ENSPPAG00000029376 #22 ENSPPAG00000040740 AGTR2 (ENSPPAG00000025632) SLC6A14 (ENSPPAG00000028185) CT83 (ENSPPAG00000028565) ENSPPAG00000032254 ENSPPAG00000039439 KLHL13 (ENSPPAG00000041656) WDR44 (ENSPPAG00000034699) DOCK11 (ENSPPAG00000027285) IL13RA1 (ENSPPAG00000030651) ZCCHC12 (ENSPPAG00000023706) ENSPPAG00000033537 LONRF3 (ENSPPAG00000019392) CT47C1 (ENSPPAG00000004677) KIAA1210 (ENSPPAG00000033897) Chimpanzee MODERN SPECIES 972 TRPC5 (ENSPTRG00000022192) TRPC5OS (ENSPTRG00000045594) ENSPTRG00000050241 RTL4 (ENSPTRG00000052718) LHFPL1 (ENSPTRG00000022195) AMOT (ENSPTRG00000022197) ENSPTRG00000049885 HTR2C (ENSPTRG00000022199) ENSPTRG00000052825 IL13RA2 (ENSPTRG00000022200) LRCH2 (ENSPTRG00000022201) RBMXL3 (ENSPTRG00000028217) ENSPTRG00000044154 ENSPTRG00000049789 PLS3 (ENSPTRG00000022205) ENSPTRG00000043395 #22 ENSPTRG00000040819 ENSPTRG00000043128 AGTR2 (ENSPTRG00000052314) SLC6A14 (ENSPTRG00000022208) CT83 (ENSPTRG00000028214) ENSPTRG00000051003 ENSPTRG00000017238 KLHL13 (ENSPTRG00000044070) ENSPTRG00000052513 DOCK11 (ENSPTRG00000022212) IL13RA1 (ENSPTRG00000022214) ZCCHC12 (ENSPTRG00000022215) ENSPTRG00000000263 LONRF3 (ENSPTRG00000022217) CT47C1 (ENSPTRG00000040870) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.a ##25 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.v.a ##25 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 Vervet Monkey MODERN SPECIES TTC9C (ENSCSAG00000006708) HNRNPUL2 (ENSCSAG00000006701) GNG3 (ENSCSAG00000006696) #7 BSCL2 (ENSCSAG00000006684) #8 LRRN4CL (ENSCSAG00000019176) #9 UBXN1 (ENSCSAG00000006659) #10 UQCC3 (ENSCSAG00000006653) #11 CSKMT (ENSCSAG00000006647) #13 INTS5 (ENSCSAG00000006644) #15 GANAB (ENSCSAG00000006636) #16 B3GAT3 (ENSCSAG00000006625) #17 ROM1 (ENSCSAG00000006620) #18 EML3 (ENSCSAG00000006615) #19 MTA2 (ENSCSAG00000006593) #20 TUT1 (ENSCSAG00000006566) #21 EEF1G (ENSCSAG00000006560) #22 AHNAK (ENSCSAG00000006556) #23 SCGB1A1 (ENSCSAG00000006546) ASRGL1 (ENSCSAG00000006542) #24 SCGB1D4 (ENSCSAG00000006534) ENSCSAG00000006528 #25 SCGB1D2 (ENSCSAG00000006525) SCGB2A1 (ENSCSAG00000006522) #25 SCGB1D1 (ENSCSAG00000006515) INCENP (ENSCSAG00000006508) #27 BEST1 (ENSCSAG00000006498) #29 ENSCSAG00000006491 ##28 RAB3IL1 (ENSCSAG00000006483) #30 FADS3 (ENSCSAG00000006479) #31 FADS2 (ENSCSAG00000006475) #32 FADS1 (ENSCSAG00000006469) #33 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00390000011666.x.a.e.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 Macaca ANCESTRAL SPECIES 2 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00390000011666.x.a.e.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.b.b ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.c.b ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.b.b.a.b.b.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000183316 Rhesus DUPLICATION Rhesus MODERN SPECIES 5 TTC9C (ENSMMUG00000039671) HNRNPUL2 (ENSMMUG00000051635) BSCL2 (ENSMMUG00000014363) #8 GNG3 (ENSMMUG00000042036) #7 LRRN4CL (ENSMMUG00000031129) #9 UBXN1 (ENSMMUG00000005761) #10 ENSMMUG00000059843 CSKMT (ENSMMUG00000046328) #13 INTS5 (ENSMMUG00000013949) #15 GANAB (ENSMMUG00000018117) #16 B3GAT3 (ENSMMUG00000031126) #17 ROM1 (ENSMMUG00000059876) #18 EML3 (ENSMMUG00000018112) #19 MTA2 (ENSMMUG00000018110) #20 TUT1 (ENSMMUG00000006595) #21 EEF1G (ENSMMUG00000006598) #22 AHNAK (ENSMMUG00000022301) #23 SCGB1A1 (ENSMMUG00000031123) ASRGL1 (ENSMMUG00000013831) #24 SCGB1D4 (ENSMMUG00000058338) SCGB1D2 (ENSMMUG00000004424) SCGB2A1 (ENSMMUG00000054866) #25 SCGB1D1 (ENSMMUG00000062870) INCENP (ENSMMUG00000004420) #27 ENSMMUG00000062874 FTH1 (ENSMMUG00000015146) ##28 BEST1 (ENSMMUG00000015147) #29 RAB3IL1 (ENSMMUG00000015148) #30 FADS3 (ENSMMUG00000000328) #31 FADS2 (ENSMMUG00000000327) #32 FADS1 (ENSMMUG00000013798) #33 Rhesus MODERN SPECIES 17 SOS2 (ENSMMUG00000007464) VCPKMT (ENSMMUG00000007460) ARF6 (ENSMMUG00000041889) ENSMMUG00000049787 NEMF (ENSMMUG00000008214) KLHDC2 (ENSMMUG00000029366) KLHDC1 (ENSMMUG00000003914) ENSMMUG00000057868 POLE2 (ENSMMUG00000003913) DNAAF2 (ENSMMUG00000008284) MGAT2 (ENSMMUG00000008285) RPL36AL (ENSMMUG00000008286) LRR1 (ENSMMUG00000037526) RPS29 (ENSMMUG00000029367) ENSMMUG00000058168 ENSMMUG00000016009 #22 ENSMMUG00000062305 MDGA2 (ENSMMUG00000015110) RPL10L (ENSMMUG00000058343) ENSMMUG00000053288 ENSMMUG00000053931 MIS18BP1 (ENSMMUG00000016515) FANCM (ENSMMUG00000016513) FKBP3 (ENSMMUG00000016512) PRPF39 (ENSMMUG00000010862) TOGARAM1 (ENSMMUG00000010860) KLHL28 (ENSMMUG00000017678) C7H14orf28 (ENSMMUG00000017677) ENSMMUG00000052465 ENSMMUG00000049994 ENSMMUG00000063179 Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 5 ENSMFAG00000039354 #7 BSCL2 (ENSMFAG00000031001) #8 LRRN4CL (ENSMFAG00000049892) #9 UBXN1 (ENSMFAG00000045415) #10 ENSMFAG00000051023 ENSMFAG00000061333 CSKMT (ENSMFAG00000032323) #13 C11orf98 (ENSMFAG00000003562) #14 INTS5 (ENSMFAG00000031212) #15 GANAB (ENSMFAG00000045211) #16 B3GAT3 (ENSMFAG00000037575) #17 ROM1 (ENSMFAG00000002310) #18 EML3 (ENSMFAG00000037614) #19 MTA2 (ENSMFAG00000041694) #20 TUT1 (ENSMFAG00000000912) #21 ENSMFAG00000007224 #22 ENSMFAG00000037659 ##23 SCGB1A1 (ENSMFAG00000043963) ASRGL1 (ENSMFAG00000036351) #24 ENSMFAG00000060551 SCGB1D4 (ENSMFAG00000000615) SCGB1D2 (ENSMFAG00000032089) SCGB2A1 (ENSMFAG00000002274) #25 SCGB1D1 (ENSMFAG00000032054) INCENP (ENSMFAG00000031558) #27 ENSMFAG00000047451 ENSMFAG00000007415 ##28 BEST1 (ENSMFAG00000033154) #29 RAB3IL1 (ENSMFAG00000045583) #30 FADS3 (ENSMFAG00000040762) #31 ENSMFAG00000062962 Crab-eating macaque MODERN SPECIES 17 DMAC2L (ENSMFAG00000042085) L2HGDH (ENSMFAG00000044149) SOS2 (ENSMFAG00000000174) VCPKMT (ENSMFAG00000033945) ARF6 (ENSMFAG00000001534) NEMF (ENSMFAG00000005357) KLHDC2 (ENSMFAG00000035256) KLHDC1 (ENSMFAG00000003879) ENSMFAG00000047329 POLE2 (ENSMFAG00000002595) DNAAF2 (ENSMFAG00000045239) MGAT2 (ENSMFAG00000043906) ENSMFAG00000057803 LRR1 (ENSMFAG00000036709) ENSMFAG00000045980 ENSMFAG00000034295 #22 ENSMFAG00000007818 MDGA2 (ENSMFAG00000032319) RPL10L (ENSMFAG00000053210) ENSMFAG00000064548 ENSMFAG00000055183 ENSMFAG00000055972 MIS18BP1 (ENSMFAG00000043146) FANCM (ENSMFAG00000000383) ENSMFAG00000000044 TOGARAM1 (ENSMFAG00000041007) KLHL28 (ENSMFAG00000033166) C14orf28 (ENSMFAG00000032623) ENSMFAG00000054302 ENSMFAG00000057564 ENSMFAG00000053324 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 433 HNRNPUL2 (ENSMNEG00000036955) GNG3 (ENSMNEG00000041074) #7 BSCL2 (ENSMNEG00000027955) #8 LRRN4CL (ENSMNEG00000008801) #9 UBXN1 (ENSMNEG00000023355) #10 UQCC3 (ENSMNEG00000009079) #11 CSKMT (ENSMNEG00000032750) #13 ENSMNEG00000031419 #14 INTS5 (ENSMNEG00000009187) #15 GANAB (ENSMNEG00000044710) #16 B3GAT3 (ENSMNEG00000018264) #17 ROM1 (ENSMNEG00000040388) #18 EML3 (ENSMNEG00000035836) #19 MTA2 (ENSMNEG00000041381) #20 TUT1 (ENSMNEG00000029841) #21 ENSMNEG00000044626 #22 ENSMNEG00000039903 #23 ENSMNEG00000043224 ##23 SCGB1A1 (ENSMNEG00000030793) ASRGL1 (ENSMNEG00000044187) #24 ENSMNEG00000017421 SCGB1D4 (ENSMNEG00000029024) ENSMNEG00000039066 #25 SCGB1D2 (ENSMNEG00000038358) SCGB2A1 (ENSMNEG00000036574) #25 SCGB1D1 (ENSMNEG00000031707) INCENP (ENSMNEG00000034022) #27 ENSMNEG00000034175 ENSMNEG00000035801 ##28 BEST1 (ENSMNEG00000032288) #29 RAB3IL1 (ENSMNEG00000041630) #30 Pig-tailed macaque MODERN SPECIES 577 DMAC2L (ENSMNEG00000029226) L2HGDH (ENSMNEG00000036800) ENSMNEG00000028934 SOS2 (ENSMNEG00000027545) VCPKMT (ENSMNEG00000042287) ENSMNEG00000031593 ARF6 (ENSMNEG00000035341) NEMF (ENSMNEG00000039343) KLHDC2 (ENSMNEG00000041846) KLHDC1 (ENSMNEG00000036986) POLE2 (ENSMNEG00000022601) DNAAF2 (ENSMNEG00000034164) ENSMNEG00000028277 LRR1 (ENSMNEG00000040687) ENSMNEG00000031083 ENSMNEG00000004495 #22 ENSMNEG00000016649 ENSMNEG00000033141 MDGA2 (ENSMNEG00000007673) ENSMNEG00000032166 MIS18BP1 (ENSMNEG00000010715) FANCM (ENSMNEG00000038659) FKBP3 (ENSMNEG00000026591) PRPF39 (ENSMNEG00000045131) TOGARAM1 (ENSMNEG00000043052) KLHL28 (ENSMNEG00000039812) FSCB (ENSMNEG00000039959) LRFN5 (ENSMNEG00000039668) Pig-tailed macaque MODERN SPECIES 95 FEZF1 (ENSMNEG00000017416) ENSMNEG00000037281 CADPS2 (ENSMNEG00000009908) SLC13A1 (ENSMNEG00000035147) IQUB (ENSMNEG00000032100) NDUFA5 (ENSMNEG00000039718) ASB15 (ENSMNEG00000041583) LMOD2 (ENSMNEG00000031393) WASL (ENSMNEG00000035595) HYAL4 (ENSMNEG00000036511) SPAM1 (ENSMNEG00000034544) TMEM229A (ENSMNEG00000038128) GPR37 (ENSMNEG00000037150) ENSMNEG00000043524 POT1 (ENSMNEG00000029873) ENSMNEG00000034791 #22 ENSMNEG00000010937 GRM8 (ENSMNEG00000039046) ENSMNEG00000003199 ZNF800 (ENSMNEG00000041752) GCC1 (ENSMNEG00000043499) ARF5 (ENSMNEG00000040893) FSCN3 (ENSMNEG00000042501) PAX4 (ENSMNEG00000043809) LRRC4 (ENSMNEG00000037000) SND1 (ENSMNEG00000039808) LEP (ENSMNEG00000034814) RBM28 (ENSMNEG00000036970) PRRT4 (ENSMNEG00000031115) IMPDH1 (ENSMNEG00000031042) GARIN1A (ENSMNEG00000028708) Pig-tailed macaque MODERN SPECIES 167 DCX (ENSMNEG00000030015) SERTM2 (ENSMNEG00000007178) ALG13 (ENSMNEG00000035215) ENSMNEG00000037987 TRPC5 (ENSMNEG00000027667) LHFPL1 (ENSMNEG00000045486) AMOT (ENSMNEG00000036435) ENSMNEG00000038831 HTR2C (ENSMNEG00000031075) ENSMNEG00000038629 IL13RA2 (ENSMNEG00000041297) LRCH2 (ENSMNEG00000036629) ENSMNEG00000026102 LUZP4 (ENSMNEG00000043768) PLS3 (ENSMNEG00000034620) ENSMNEG00000038885 #22 Pig-tailed macaque MODERN SPECIES 196 ENSMNEG00000028103 PFKM (ENSMNEG00000036534) ENSMNEG00000039461 ASB8 (ENSMNEG00000036379) CCDC184 (ENSMNEG00000000953) ENSMNEG00000045356 ZNF641 (ENSMNEG00000044922) ENSMNEG00000028722 #22 ENSMNEG00000032933 C12orf54 (ENSMNEG00000038960) OR8S1 (ENSMNEG00000032997) LALBA (ENSMNEG00000034387) KANSL2 (ENSMNEG00000039608) CCNT1 (ENSMNEG00000042465) TEX49 (ENSMNEG00000028091) ADCY6 (ENSMNEG00000043535) CACNB3 (ENSMNEG00000029365) DDX23 (ENSMNEG00000040016) RND1 (ENSMNEG00000038480) FKBP11 (ENSMNEG00000030125) CCDC65 (ENSMNEG00000043967) ARF3 (ENSMNEG00000032173) WNT10B (ENSMNEG00000022399) Cercopithecinae_b ANCESTRAL SPECIES 16 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00390000013802.v.a ##25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00390000011666.x.a.e.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Olive baboon MODERN SPECIES 3 HNRNPUL2 (ENSPANG00000023745) GNG3 (ENSPANG00000042558) #7 BSCL2 (ENSPANG00000011406) #8 LRRN4CL (ENSPANG00000003479) #9 UBXN1 (ENSPANG00000005453) #10 UQCC3 (ENSPANG00000035430) #11 CSKMT (ENSPANG00000046328) #13 C11orf98 (ENSPANG00000007575) #14 ENSPANG00000040911 #15 GANAB (ENSPANG00000010909) #16 B3GAT3 (ENSPANG00000005376) #17 ROM1 (ENSPANG00000015653) #18 EML3 (ENSPANG00000012313) #19 MTA2 (ENSPANG00000005452) #20 TUT1 (ENSPANG00000010908) #21 EEF1G (ENSPANG00000003106) #22 ENSPANG00000037028 ##23 SCGB1A1 (ENSPANG00000019204) ASRGL1 (ENSPANG00000011234) #24 SCGB2A2 (ENSPANG00000032557) ##25 SCGB1D2 (ENSPANG00000016130) SCGB2A1 (ENSPANG00000046637) #25 SCGB1D1 (ENSPANG00000016660) INCENP (ENSPANG00000016661) #27 ENSPANG00000032665 FTH1 (ENSPANG00000016662) ##28 BEST1 (ENSPANG00000016663) #29 RAB3IL1 (ENSPANG00000023599) #30 FADS3 (ENSPANG00000016422) #31 ENSPANG00000035579 FADS2 (ENSPANG00000015652) #32 Cercopithecinae_d ANCESTRAL SPECIES 6 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00730000111073 #27 ENSGT00390000011666.x.a.e.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 Drill DUPLICATION Drill MODERN SPECIES 1111 TTC9C (ENSMLEG00000036250) HNRNPUL2 (ENSMLEG00000033906) GNG3 (ENSMLEG00000039091) #7 BSCL2 (ENSMLEG00000037535) #8 LRRN4CL (ENSMLEG00000006668) #9 UBXN1 (ENSMLEG00000027508) #10 UQCC3 (ENSMLEG00000042115) #11 CSKMT (ENSMLEG00000029829) #13 ENSMLEG00000024134 #14 INTS5 (ENSMLEG00000036338) #15 GANAB (ENSMLEG00000035204) #16 B3GAT3 (ENSMLEG00000032645) #17 ROM1 (ENSMLEG00000005548) #18 EML3 (ENSMLEG00000031847) #19 TUT1 (ENSMLEG00000040498) #21 EEF1G (ENSMLEG00000023252) #22 ENSMLEG00000027464 ##23 SCGB1A1 (ENSMLEG00000043598) ASRGL1 (ENSMLEG00000043526) #24 ENSMLEG00000039578 SCGB1D4 (ENSMLEG00000033831) ENSMLEG00000029127 #25 SCGB1D2 (ENSMLEG00000035930) SCGB2A1 (ENSMLEG00000035453) #25 SCGB1D1 (ENSMLEG00000042430) INCENP (ENSMLEG00000043817) #27 ENSMLEG00000042552 ##28 BEST1 (ENSMLEG00000034408) #29 RAB3IL1 (ENSMLEG00000043733) #30 FADS3 (ENSMLEG00000043283) #31 ENSMLEG00000021942 Drill MODERN SPECIES 129 HTR2C (ENSMLEG00000034297) ENSMLEG00000038638 IL13RA2 (ENSMLEG00000033567) LRCH2 (ENSMLEG00000003513) LUZP4 (ENSMLEG00000030075) PLS3 (ENSMLEG00000027953) ENSMLEG00000007374 #22 Drill MODERN SPECIES 959 RAPGEF3 (ENSMLEG00000041624) SLC48A1 (ENSMLEG00000001439) HDAC7 (ENSMLEG00000030810) VDR (ENSMLEG00000039437) TMEM106C (ENSMLEG00000040987) COL2A1 (ENSMLEG00000040212) SENP1 (ENSMLEG00000042606) PFKM (ENSMLEG00000013288) ASB8 (ENSMLEG00000035600) CCDC184 (ENSMLEG00000004337) ENSMLEG00000040313 ENSMLEG00000039549 ENSMLEG00000035066 ENSMLEG00000007600 ZNF641 (ENSMLEG00000044259) ENSMLEG00000036523 #22 ENSMLEG00000030489 C12orf54 (ENSMLEG00000013602) OR8S1 (ENSMLEG00000043967) ENSMLEG00000033939 KANSL2 (ENSMLEG00000030435) CCNT1 (ENSMLEG00000043751) TEX49 (ENSMLEG00000031575) ADCY6 (ENSMLEG00000043020) CACNB3 (ENSMLEG00000021784) DDX23 (ENSMLEG00000042846) RND1 (ENSMLEG00000030008) FKBP11 (ENSMLEG00000043157) CCDC65 (ENSMLEG00000039143) ENSMLEG00000018862 ARF3 (ENSMLEG00000028270) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 518 HNRNPUL2 (ENSCATG00000034588) BSCL2 (ENSCATG00000037983) #8 GNG3 (ENSCATG00000038843) #7 LRRN4CL (ENSCATG00000003551) #9 UBXN1 (ENSCATG00000036706) #10 UQCC3 (ENSCATG00000015726) #11 LBHD1 (ENSCATG00000037717) #12 CSKMT (ENSCATG00000035188) #13 INTS5 (ENSCATG00000032127) #15 GANAB (ENSCATG00000037474) #16 B3GAT3 (ENSCATG00000043834) #17 ROM1 (ENSCATG00000043968) #18 EML3 (ENSCATG00000043181) #19 MTA2 (ENSCATG00000037060) #20 TUT1 (ENSCATG00000036770) #21 EEF1G (ENSCATG00000038495) #22 AHNAK (ENSCATG00000038864) #23 SCGB1A1 (ENSCATG00000038223) ASRGL1 (ENSCATG00000038215) #24 ENSCATG00000036822 SCGB1D4 (ENSCATG00000037621) ENSCATG00000043571 #25 SCGB1D2 (ENSCATG00000037575) SCGB2A1 (ENSCATG00000043661) #25 SCGB1D1 (ENSCATG00000037601) INCENP (ENSCATG00000037082) #27 ENSCATG00000037944 FTH1 (ENSCATG00000043595) ##28 BEST1 (ENSCATG00000037568) #29 RAB3IL1 (ENSCATG00000038420) #30 FADS3 (ENSCATG00000042722) #31 Sooty mangabey MODERN SPECIES 283 ENSCATG00000016881 ENSCATG00000039884 SERTM2 (ENSCATG00000013352) ALG13 (ENSCATG00000032824) TRPC5 (ENSCATG00000029734) LHFPL1 (ENSCATG00000041033) AMOT (ENSCATG00000035828) ENSCATG00000028931 ENSCATG00000043275 ENSCATG00000038904 HTR2C (ENSCATG00000031908) IL13RA2 (ENSCATG00000037283) LRCH2 (ENSCATG00000037702) LUZP4 (ENSCATG00000012199) PLS3 (ENSCATG00000038506) ENSCATG00000045172 #22 AGTR2 (ENSCATG00000020256) SLC6A14 (ENSCATG00000038946) CT83 (ENSCATG00000034454) KLHL13 (ENSCATG00000040977) WDR44 (ENSCATG00000044289) DOCK11 (ENSCATG00000038401) ENSCATG00000009670 ENSCATG00000040411 IL13RA1 (ENSCATG00000034378) ZCCHC12 (ENSCATG00000006188) LONRF3 (ENSCATG00000040361) CT47C1 (ENSCATG00000038614) KIAA1210 (ENSCATG00000015100) ENSCATG00000040418 PGRMC1 (ENSCATG00000039960) Sooty mangabey MODERN SPECIES 607 PLEKHG3 (ENSCATG00000034138) PPP1R36 (ENSCATG00000030666) HSPA2 (ENSCATG00000037872) ZBTB1 (ENSCATG00000032601) ZBTB25 (ENSCATG00000013685) MTHFD1 (ENSCATG00000014701) ESR2 (ENSCATG00000036474) SYNE2 (ENSCATG00000028929) SGPP1 (ENSCATG00000012153) WDR89 (ENSCATG00000011714) ENSCATG00000038493 ENSCATG00000035888 PPP2R5E (ENSCATG00000019906) GPHB5 (ENSCATG00000045284) RHOJ (ENSCATG00000035763) ENSCATG00000030810 #22 KCNH5 (ENSCATG00000042607) ZNF71 (ENSCATG00000034845) ZNF470 (ENSCATG00000042389) ZFP28 (ENSCATG00000044000) ZNF471 (ENSCATG00000040262) ZNF667 (ENSCATG00000030847) ZNF583 (ENSCATG00000033066) ZNF582 (ENSCATG00000036892) ENSCATG00000034610 ENSCATG00000042409 ENSCATG00000039719 EDDM13 (ENSCATG00000037344) ZSCAN5A (ENSCATG00000039708) ZSCAN5C (ENSCATG00000040802) ZSCAN5B (ENSCATG00000038324) Rhinopithecus DUPLICATION Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 15 ENSGT00940000160376 ENSGT01100000263497.B.e.b #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.y.b #22 ENSGT00390000007552.f.x.y.a #22 ENSGT00940000154902.bb.b #23 ENSGT01090000263362 ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00950000183014.f.b.a.a.t.g.a.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 Golden snub-nosed monkey MODERN SPECIES 2511 TTC9C (ENSRROG00000035353) HNRNPUL2 (ENSRROG00000036561) BSCL2 (ENSRROG00000036969) #8 GNG3 (ENSRROG00000037172) #7 UBXN1 (ENSRROG00000040915) #10 UQCC3 (ENSRROG00000007192) #11 CSKMT (ENSRROG00000027675) #13 ENSRROG00000044930 #14 INTS5 (ENSRROG00000042424) #15 GANAB (ENSRROG00000037256) #16 B3GAT3 (ENSRROG00000029771) #17 ROM1 (ENSRROG00000033061) #18 EML3 (ENSRROG00000043037) #19 MTA2 (ENSRROG00000044052) #20 TUT1 (ENSRROG00000043315) #21 ENSRROG00000042836 #22 AHNAK (ENSRROG00000044889) #23 ENSRROG00000045117 ASRGL1 (ENSRROG00000031523) #24 SCGB1D4 (ENSRROG00000039995) ENSRROG00000044482 #25 SCGB1D2 (ENSRROG00000031331) SCGB2A1 (ENSRROG00000044015) #25 SCGB1D1 (ENSRROG00000036655) ENSRROG00000036187 ENSRROG00000023884 INCENP (ENSRROG00000030466) #27 ENSRROG00000030005 ##28 BEST1 (ENSRROG00000034577) #29 RAB3IL1 (ENSRROG00000013229) #30 FADS3 (ENSRROG00000037612) #31 Rhinopithecus ANCESTRAL SPECIES 15 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B.e.b #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615.o.a #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f.x.y.b #22 ENSGT00390000007552.f.x.y.a #22 ENSGT00940000154902.bb.b #23 ENSGT01090000263362 ENSGT00950000183045.A.a.a #24 ENSGT00940000153052.c.a.a.a ENSGT00530000063866.c.b ENSGT00390000013802.v.b.c #25 ENSGT00530000063866.c.a ENSGT00390000013802.v.b.d #25 ENSGT00530000063866.d ENSGT00950000183014.f.b.a.a.t.g.a.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##28 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##28 ENSGT00940000158650 #29 Golden snub-nosed monkey MODERN SPECIES 3136 ENSRROG00000037228 SLC5A9 (ENSRROG00000044270) ENSRROG00000039977 ENSRROG00000036867 #22 TRABD2B (ENSRROG00000044560) ENSRROG00000026568 ENSRROG00000010148 CMPK1 (ENSRROG00000031992) STIL (ENSRROG00000030013) TAL1 (ENSRROG00000039099) PDZK1IP1 (ENSRROG00000033498) Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 600 TTC9C (ENSRBIG00000044503) HNRNPUL2 (ENSRBIG00000037820) BSCL2 (ENSRBIG00000040625) #8 ENSRBIG00000036927 #7 UBXN1 (ENSRBIG00000028404) #10 UQCC3 (ENSRBIG00000038515) #11 CSKMT (ENSRBIG00000037785) #13 ENSRBIG00000030851 #14 INTS5 (ENSRBIG00000045006) #15 GANAB (ENSRBIG00000040636) #16 B3GAT3 (ENSRBIG00000012660) #17 ROM1 (ENSRBIG00000033282) #18 EML3 (ENSRBIG00000029464) #19 MTA2 (ENSRBIG00000038336) #20 TUT1 (ENSRBIG00000021240) #21 ENSRBIG00000042208 #22 ENSRBIG00000032801 #23 ENSRBIG00000037491 ASRGL1 (ENSRBIG00000008615) #24 ENSRBIG00000027474 ENSRBIG00000026802 SCGB1D4 (ENSRBIG00000044615) ENSRBIG00000039690 #25 SCGB1D2 (ENSRBIG00000032475) SCGB2A1 (ENSRBIG00000041379) #25 SCGB1D1 (ENSRBIG00000034273) ENSRBIG00000038214 INCENP (ENSRBIG00000040656) #27 FTH1 (ENSRBIG00000044604) ##28 BEST1 (ENSRBIG00000027850) #29 RAB3IL1 (ENSRBIG00000013414) #30 Black snub-nosed monkey MODERN SPECIES 220 AGBL4 (ENSRBIG00000036871) BEND5 (ENSRBIG00000036850) SPATA6 (ENSRBIG00000038558) SLC5A9 (ENSRBIG00000010075) ENSRBIG00000040410 ENSRBIG00000040965 ENSRBIG00000044514 #22 Rhinopithecus ANCESTRAL SPECIES 4 ENSGT00530000063825.B ENSGT00940000159931 ENSGT00390000002307 ENSGT00940000159065 ENSGT00940000155473 ENSGT00940000161281 ENSGT00940000155224 ENSGT00940000155489.b.f ENSGT00940000155440.d ENSGT00940000159366 ENSGT00950000183070.a.b.g.b.a.d ENSGT00390000002978 ENSGT00910000147030 ENSGT01100000263574.a ENSGT00940000162121 ENSGT00390000007552.f.x.z #22 ENSGT00390000014843 ENSGT00940000159881.a.a.a ENSGT00940000161726 ENSGT00940000155808 ENSGT00940000159544 ENSGT00390000010327 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b.e ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00560000078683 ENSGT00950000183080.a.a ENSGT00940000160653 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2586 ARMC6 (ENSRROG00000034739) SUGP2 (ENSRROG00000029264) HOMER3 (ENSRROG00000038822) DDX49 (ENSRROG00000032460) COPE (ENSRROG00000032396) CERS1 (ENSRROG00000038529) GDF1 (ENSRROG00000041769) UPF1 (ENSRROG00000040935) COMP (ENSRROG00000043878) CRTC1 (ENSRROG00000039912) KLHL26 (ENSRROG00000030821) TMEM59L (ENSRROG00000024021) CRLF1 (ENSRROG00000030939) REX1BD (ENSRROG00000030965) UBA52 (ENSRROG00000033884) ENSRROG00000044752 #22 FKBP8 (ENSRROG00000022396) ELL (ENSRROG00000042635) ISYNA1 (ENSRROG00000041153) SSBP4 (ENSRROG00000037587) LRRC25 (ENSRROG00000032505) GDF15 (ENSRROG00000031808) PGPEP1 (ENSRROG00000040082) LSM4 (ENSRROG00000045706) IQCN (ENSRROG00000043412) PDE4C (ENSRROG00000035958) RAB3A (ENSRROG00000028696) MPV17L2 (ENSRROG00000038653) IFI30 (ENSRROG00000034013) PIK3R2 (ENSRROG00000026877) MAST3 (ENSRROG00000028644) Golden snub-nosed monkey MODERN SPECIES 2905 RAPGEF3 (ENSRROG00000031521) SLC48A1 (ENSRROG00000036870) HDAC7 (ENSRROG00000006265) VDR (ENSRROG00000038196) TMEM106C (ENSRROG00000021591) COL2A1 (ENSRROG00000020874) SENP1 (ENSRROG00000041591) ENSRROG00000033054 PFKM (ENSRROG00000035567) ASB8 (ENSRROG00000033794) ENSRROG00000037143 CCDC184 (ENSRROG00000000771) ENSRROG00000035893 OR10AD1 (ENSRROG00000036758) ZNF641 (ENSRROG00000028995) ENSRROG00000045033 #22 C12orf54 (ENSRROG00000040880) OR8S1 (ENSRROG00000042102) LALBA (ENSRROG00000030100) KANSL2 (ENSRROG00000028358) CCNT1 (ENSRROG00000044470) TEX49 (ENSRROG00000040354) Golden snub-nosed monkey MODERN SPECIES 2187 BMAL2 (ENSRROG00000029713) STK38L (ENSRROG00000029873) ENSRROG00000036736 C12orf71 (ENSRROG00000033944) MED21 (ENSRROG00000036888) TM7SF3 (ENSRROG00000029894) ENSRROG00000026425 FGFR1OP2 (ENSRROG00000031733) INTS13 (ENSRROG00000043367) ENSRROG00000037938 ITPR2 (ENSRROG00000035439) ENSRROG00000036680 SSPN (ENSRROG00000023865) BHLHE41 (ENSRROG00000037508) RASSF8 (ENSRROG00000039653) ENSRROG00000027147 #22 LMNTD1 (ENSRROG00000029522) Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 621 PGS1 (ENSRBIG00000032209) TMEM235 (ENSRBIG00000031997) ENSRBIG00000029423 BIRC5 (ENSRBIG00000037429) AFMID (ENSRBIG00000035765) TK1 (ENSRBIG00000004804) ENSRBIG00000043138 C17orf99 (ENSRBIG00000036244) TMC8 (ENSRBIG00000030185) TMC6 (ENSRBIG00000035625) TNRC6C (ENSRBIG00000027777) TMEM59L (ENSRBIG00000030377) CRLF1 (ENSRBIG00000036409) REX1BD (ENSRBIG00000039070) UBA52 (ENSRBIG00000028020) ENSRBIG00000013976 #22 FKBP8 (ENSRBIG00000038838) ELL (ENSRBIG00000041918) ISYNA1 (ENSRBIG00000044096) SSBP4 (ENSRBIG00000022818) LRRC25 (ENSRBIG00000036814) GDF15 (ENSRBIG00000038712) PGPEP1 (ENSRBIG00000043819) LSM4 (ENSRBIG00000024717) IQCN (ENSRBIG00000029845) PDE4C (ENSRBIG00000028744) RAB3A (ENSRBIG00000029506) MPV17L2 (ENSRBIG00000033280) IFI30 (ENSRBIG00000041792) PIK3R2 (ENSRBIG00000031224) MAST3 (ENSRBIG00000037301) Black snub-nosed monkey MODERN SPECIES 1192 ZNF641 (ENSRBIG00000032093) ENSRBIG00000032258 #22 C12orf54 (ENSRBIG00000039534) OR8S1 (ENSRBIG00000033095) LALBA (ENSRBIG00000007431) KANSL2 (ENSRBIG00000031481) CCNT1 (ENSRBIG00000034059) TEX49 (ENSRBIG00000040348) ADCY6 (ENSRBIG00000020775) CACNB3 (ENSRBIG00000027539) DDX23 (ENSRBIG00000040362) RND1 (ENSRBIG00000008703) FKBP11 (ENSRBIG00000034219) CCDC65 (ENSRBIG00000031835) ENSRBIG00000040877 ARF3 (ENSRBIG00000044317) WNT10B (ENSRBIG00000031686) Black snub-nosed monkey MODERN SPECIES 2579 MED21 (ENSRBIG00000032391) TM7SF3 (ENSRBIG00000027607) ENSRBIG00000024015 FGFR1OP2 (ENSRBIG00000040847) INTS13 (ENSRBIG00000038639) ITPR2 (ENSRBIG00000035254) ENSRBIG00000029333 ENSRBIG00000044357 SSPN (ENSRBIG00000012155) BHLHE41 (ENSRBIG00000032629) RASSF8 (ENSRBIG00000035003) ENSRBIG00000027828 #22 LMNTD1 (ENSRBIG00000044203) KRAS (ENSRBIG00000037160) ENSRBIG00000041334 DNAI7 (ENSRBIG00000035616) ENSRBIG00000005977 BCAT1 (ENSRBIG00000028607) Tarsier DUPLICATION Tarsier MODERN SPECIES 5709 ENSTSYG00000032549 #22 ENSTSYG00000035986 Tarsier MODERN SPECIES 7253 ANXA9 (ENSTSYG00000012630) ENSTSYG00000036881 RASL10B (ENSTSYG00000026278) AP2B1 (ENSTSYG00000013030) PEX12 (ENSTSYG00000013016) SLFN14 (ENSTSYG00000026907) ENSTSYG00000032197 SLFN13 (ENSTSYG00000035997) ENSTSYG00000027201 #22 ENSTSYG00000012957 ENSTSYG00000012984 UNC45B (ENSTSYG00000005718) NLE1 (ENSTSYG00000005707) FNDC8 (ENSTSYG00000033775) RAD51D (ENSTSYG00000002439) Tarsier DUPLICATION Tarsier MODERN SPECIES 5168 INTS5 (ENSTSYG00000003094) #15 GANAB (ENSTSYG00000003049) #16 B3GAT3 (ENSTSYG00000033176) #17 ROM1 (ENSTSYG00000032516) #18 EML3 (ENSTSYG00000026117) #19 MTA2 (ENSTSYG00000000149) #20 TUT1 (ENSTSYG00000000147) #21 EEF1G (ENSTSYG00000000144) #22 Tarsier MODERN SPECIES 5849 ENSTSYG00000025969 DHRS12 (ENSTSYG00000006748) WDFY2 (ENSTSYG00000000923) INTS6 (ENSTSYG00000006630) SERPINE3 (ENSTSYG00000006550) FAM124A (ENSTSYG00000001829) C13orf42 (ENSTSYG00000025780) ENSTSYG00000012177 ENSTSYG00000006762 ENSTSYG00000026971 #22 ENSTSYG00000030005 RNF121 (ENSTSYG00000006770) IL18BP (ENSTSYG00000034181) NUMA1 (ENSTSYG00000013691) LAMTOR1 (ENSTSYG00000014730) TOMT (ENSTSYG00000014729) ANAPC15 (ENSTSYG00000014179) FOLR3 (ENSTSYG00000036287) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00530000063866.f.a ENSGT00390000013802.v.a ##25 ENSGT00530000063866.f.b ENSGT00390000013802.v.b #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 Tree shrew MODERN SPECIES 4683 INTS5 (ENSTBEG00000014202) #15 GANAB (ENSTBEG00000013800) #16 B3GAT3 (ENSTBEG00000013714) #17 ROM1 (ENSTBEG00000013670) #18 EML3 (ENSTBEG00000013431) #19 TUT1 (ENSTBEG00000013123) #21 ENSTBEG00000012860 #22 Glires ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00530000063866.f.a ENSGT00390000013802.v.b #25 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00530000063866.f.a ENSGT00390000013802.v.b #25 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.p #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00530000063866.f.a ENSGT00390000013802.v.b #25 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.p #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Sciuridae ANCESTRAL SPECIES 40 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.f.a ENSGT00390000013802.v.b #25 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00950000182841.b.a.a.b.b.o.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Eurasian red squirrel MODERN SPECIES 2 BSCL2 (ENSSVLG00005005272) #8 GNG3 (ENSSVLG00005005306) #7 LRRN4CL (ENSSVLG00005005319) #9 UBXN1 (ENSSVLG00005005341) #10 UQCC3 (ENSSVLG00005005402) #11 CSKMT (ENSSVLG00005005417) #13 ENSSVLG00005005456 #14 ENSSVLG00005005515 INTS5 (ENSSVLG00005005530) #15 GANAB (ENSSVLG00005005602) #16 B3GAT3 (ENSSVLG00005005875) #17 ROM1 (ENSSVLG00005005903) #18 EML3 (ENSSVLG00005005947) #19 MTA2 (ENSSVLG00005006257) #20 TUT1 (ENSSVLG00005006406) #21 EEF1G (ENSSVLG00005006436) #22 AHNAK (ENSSVLG00005006485) #23 SCGB1A1 (ENSSVLG00005006566) ASRGL1 (ENSSVLG00005006616) #24 ENSSVLG00005006645 ENSSVLG00005006675 ENSSVLG00005006740 #28 BEST1 (ENSSVLG00005006784) #29 RAB3IL1 (ENSSVLG00005006928) #30 FADS3 (ENSSVLG00005007116) #31 FADS2 (ENSSVLG00005007178) #32 FADS1 (ENSSVLG00005007252) #33 ENSSVLG00005007308 FEN1 (ENSSVLG00005007324) #34 TMEM258 (ENSSVLG00005007336) #35 MYRF (ENSSVLG00005007408) #36 Marmotini ANCESTRAL SPECIES 6 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.f.a ENSGT00390000013802.v.b.a #25 ENSGT00530000063866.f.b ENSGT00390000013802.v.b.b #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00950000182841.b.a.a.b.b.o.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 Marmotini_b ANCESTRAL SPECIES 21 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.f.a ENSGT00390000013802.v.b.a #25 ENSGT00530000063866.f.b ENSGT00390000013802.v.b.b #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00950000182841.b.a.a.b.b.o.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 Arctic ground squirrel MODERN SPECIES 366 HNRNPUL2 (ENSUPAG00010005211) GNG3 (ENSUPAG00010005209) #7 BSCL2 (ENSUPAG00010005172) #8 LRRN4CL (ENSUPAG00010005167) #9 UBXN1 (ENSUPAG00010005156) #10 UQCC3 (ENSUPAG00010005149) #11 CSKMT (ENSUPAG00010005145) #13 C11orf98 (ENSUPAG00010005135) #14 INTS5 (ENSUPAG00010005127) #15 GANAB (ENSUPAG00010005106) #16 B3GAT3 (ENSUPAG00010005100) #17 ROM1 (ENSUPAG00010005099) #18 EML3 (ENSUPAG00010005056) #19 MTA2 (ENSUPAG00010005038) #20 TUT1 (ENSUPAG00010005020) #21 EEF1G (ENSUPAG00010005012) #22 ENSUPAG00010004999 #23 ENSUPAG00010004996 ENSUPAG00010004986 ##23 ASRGL1 (ENSUPAG00010004983) #24 ENSUPAG00010004973 ENSUPAG00010004955 #25 ENSUPAG00010004946 ENSUPAG00010004941 #25 INCENP (ENSUPAG00010004917) #27 ENSUPAG00010004905 ##28 BEST1 (ENSUPAG00010004888) #29 ENSUPAG00010004814 #30 FADS2 (ENSUPAG00010004799) #32 FADS1 (ENSUPAG00010004789) #33 ENSUPAG00010004784 Squirrel DUPLICATION Squirrel MODERN SPECIES 181 TTC9C (ENSSTOG00000004352) HNRNPUL2 (ENSSTOG00000004327) GNG3 (ENSSTOG00000001052) #7 BSCL2 (ENSSTOG00000024362) #8 LRRN4CL (ENSSTOG00000022001) #9 UBXN1 (ENSSTOG00000004310) #10 UQCC3 (ENSSTOG00000029463) #11 C11orf98 (ENSSTOG00000025290) #14 INTS5 (ENSSTOG00000019630) #15 GANAB (ENSSTOG00000002934) #16 B3GAT3 (ENSSTOG00000002928) #17 ROM1 (ENSSTOG00000023639) #18 EML3 (ENSSTOG00000002908) #19 MTA2 (ENSSTOG00000002883) #20 TUT1 (ENSSTOG00000002859) #21 ENSSTOG00000002851 #22 ENSSTOG00000030073 ##23 SCGB1A1 (ENSSTOG00000010085) ASRGL1 (ENSSTOG00000010064) #24 SCGB2A1 (ENSSTOG00000006184) #25 ENSSTOG00000033144 INCENP (ENSSTOG00000014541) #27 ENSSTOG00000034070 ENSSTOG00000014521 #28 BEST1 (ENSSTOG00000014508) #29 RAB3IL1 (ENSSTOG00000014496) #30 FADS3 (ENSSTOG00000019661) #31 FADS2 (ENSSTOG00000014489) #32 FADS1 (ENSSTOG00000003391) #33 FEN1 (ENSSTOG00000003387) #34 ENSSTOG00000031633 Squirrel MODERN SPECIES 128 NUCB2 (ENSSTOG00000001896) KCNJ11 (ENSSTOG00000025616) ABCC8 (ENSSTOG00000001904) USH1C (ENSSTOG00000001933) OTOG (ENSSTOG00000025595) MYOD1 (ENSSTOG00000011556) KCNC1 (ENSSTOG00000019519) SERGEF (ENSSTOG00000003395) TPH1 (ENSSTOG00000003404) ENSSTOG00000031021 SAAL1 (ENSSTOG00000003419) ENSSTOG00000022064 ENSSTOG00000000012 HPS5 (ENSSTOG00000000011) GTF2H1 (ENSSTOG00000000013) ENSSTOG00000033703 #22 ENSSTOG00000000014 LDHC (ENSSTOG00000032003) TSG101 (ENSSTOG00000024403) UEVLD (ENSSTOG00000009271) ENSSTOG00000032227 ENSSTOG00000032201 SPTY2D1 (ENSSTOG00000009291) TMEM86A (ENSSTOG00000001110) PTPN5 (ENSSTOG00000000962) ENSSTOG00000025927 ENSSTOG00000032362 ENSSTOG00000032916 ENSSTOG00000032510 ENSSTOG00000030069 ENSSTOG00000026033 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 3 TTC9C (ENSMMMG00000003362) HNRNPUL2 (ENSMMMG00000002784) GNG3 (ENSMMMG00000002755) #7 BSCL2 (ENSMMMG00000002687) #8 LRRN4CL (ENSMMMG00000002684) #9 UBXN1 (ENSMMMG00000002665) #10 UQCC3 (ENSMMMG00000002655) #11 CSKMT (ENSMMMG00000002643) #13 INTS5 (ENSMMMG00000002623) #15 GANAB (ENSMMMG00000002585) #16 B3GAT3 (ENSMMMG00000002571) #17 ROM1 (ENSMMMG00000002567) #18 EML3 (ENSMMMG00000002484) #19 MTA2 (ENSMMMG00000002461) #20 TUT1 (ENSMMMG00000002433) #21 ENSMMMG00000002424 #22 ENSMMMG00000002408 #23 ENSMMMG00000002397 ##23 SCGB1A1 (ENSMMMG00000002393) ASRGL1 (ENSMMMG00000002386) #24 ENSMMMG00000002372 ENSMMMG00000002360 #25 ENSMMMG00000002256 #28 BEST1 (ENSMMMG00000002191) #29 FADS3 (ENSMMMG00000002106) #31 FADS2 (ENSMMMG00000002075) #32 FADS1 (ENSMMMG00000002044) #33 ENSMMMG00000002036 FEN1 (ENSMMMG00000002027) #34 TMEM258 (ENSMMMG00000002020) #35 MYRF (ENSMMMG00000001773) #36 Alpin marmot MODERN SPECIES ENSMMMG00000007789 SLCO4C1 (ENSMMMG00000007769) ST8SIA4 (ENSMMMG00000007750) ENSMMMG00000007722 CHD1 (ENSMMMG00000007643) ENSMMMG00000007613 ENSMMMG00000007586 ENSMMMG00000007554 RIOK2 (ENSMMMG00000007539) LIX1 (ENSMMMG00000007525) LNPEP (ENSMMMG00000007455) ERAP2 (ENSMMMG00000006028) ERAP1 (ENSMMMG00000005931) CAST (ENSMMMG00000005793) PCSK1 (ENSMMMG00000005758) ENSMMMG00000005740 #22 ELL2 (ENSMMMG00000005714) ENSMMMG00000005706 GLRX (ENSMMMG00000005701) RHOBTB3 (ENSMMMG00000005684) ENSMMMG00000005662 SPATA9 (ENSMMMG00000005647) RFESD (ENSMMMG00000005634) ENSMMMG00000005629 ARSK (ENSMMMG00000005570) SKIC3 (ENSMMMG00000005439) FAM81B (ENSMMMG00000005408) MCTP1 (ENSMMMG00000005297) SLF1 (ENSMMMG00000005222) KIAA0825 (ENSMMMG00000005181) ENSMMMG00000005155 Hystricomorpha ANCESTRAL SPECIES 37 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.e ENSGT00940000161089 ENSGT00950000183151.a.a.a ENSGT00390000015415 ENSGT00950000183197.b.a ENSGT00390000018587 ENSGT00940000153899.a.a ENSGT00730000110905.a ENSGT00390000001149 ENSGT00390000003127 ENSGT00940000155040.a ENSGT00940000157180 Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000038212 HNRNPUL2 (ENSHGLG00000003285) GNG3 (ENSHGLG00000038630) #7 BSCL2 (ENSHGLG00000002887) #8 ENSHGLG00000038756 #9 UBXN1 (ENSHGLG00000002960) #10 METTL12 (ENSHGLG00000044833) #13 ENSHGLG00000002601 #14 INTS5 (ENSHGLG00000039217) #15 ENSHGLG00000045807 #16 ENSHGLG00000045092 #16 B3GAT3 (ENSHGLG00000004546) #17 ROM1 (ENSHGLG00000003990) #18 MTA2 (ENSHGLG00000002877) #20 ENSHGLG00000037053 #21 EEF1G (ENSHGLG00000046941) #22 ENSHGLG00000034389 ##23 ENSHGLG00000037481 #23 ENSHGLG00000035437 ENSHGLG00000038948 #24 ENSHGLG00000029155 ENSHGLG00000046269 ENSHGLG00000033722 ENSHGLG00000002837 ENSHGLG00000046341 TKFC (ENSHGLG00000018883) CYB561A3 (ENSHGLG00000013997) ENSHGLG00000034372 ENSHGLG00000038968 ENSHGLG00000019090 ENSHGLG00000032097 Hystricomorpha_a ANCESTRAL SPECIES 44 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00940000161089 ENSGT00950000183151.a.a.a ENSGT00390000015415 ENSGT00950000183197.b.a ENSGT00390000018587 ENSGT00940000153899.a.a ENSGT00730000110905.a ENSGT00390000001149 ENSGT00390000003127 ENSGT00940000155040.a ENSGT00940000157180 ENSGT00940000161192 #37 Guinea pig MODERN SPECIES 44 ENSCPOG00000000739 GNG3 (ENSCPOG00000040497) #7 LRRN4CL (ENSCPOG00000036188) #9 BSCL2 (ENSCPOG00000021949) #8 UBXN1 (ENSCPOG00000004750) #10 UQCC3 (ENSCPOG00000035939) #11 CSKMT (ENSCPOG00000027504) #13 C11orf98 (ENSCPOG00000039535) #14 INTS5 (ENSCPOG00000003669) #15 GANAB (ENSCPOG00000003659) #16 B3GAT3 (ENSCPOG00000021841) #17 ROM1 (ENSCPOG00000020227) #18 EML3 (ENSCPOG00000014293) #19 MTA2 (ENSCPOG00000014290) #20 TUT1 (ENSCPOG00000014281) #21 EEF1G (ENSCPOG00000025703) #22 ENSCPOG00000032311 ##23 ASRGL1 (ENSCPOG00000038025) #24 ENSCPOG00000030162 ##25 Hystricomorpha_b ANCESTRAL SPECIES 80 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00950000183045.A.a.a #24 ENSGT00940000161089 ENSGT00950000183151.a.a.a ENSGT00390000015415 ENSGT00950000183197.b.a ENSGT00390000018587 ENSGT00940000153899.a.a ENSGT00730000110905.a ENSGT00390000001149 ENSGT00390000003127 ENSGT00940000155040.a ENSGT00940000157180 ENSGT00940000161192 #37 ENSGT00530000063626.a #36 Long-tailed chinchilla MODERN SPECIES 306 HNRNPUL2 (ENSCLAG00000000417) LRRN4CL (ENSCLAG00000000228) #9 GNG3 (ENSCLAG00000000268) #7 BSCL2 (ENSCLAG00000000105) #8 UQCC3 (ENSCLAG00000000136) #11 UBXN1 (ENSCLAG00000000144) #10 CSKMT (ENSCLAG00000000298) #13 C11orf98 (ENSCLAG00000000342) #14 INTS5 (ENSCLAG00000000384) #15 GANAB (ENSCLAG00000000345) #16 B3GAT3 (ENSCLAG00000001628) #17 ROM1 (ENSCLAG00000000479) #18 EML3 (ENSCLAG00000001662) #19 MTA2 (ENSCLAG00000000128) #20 TUT1 (ENSCLAG00000000215) #21 EEF1G (ENSCLAG00000000315) #22 ENSCLAG00000000347 ##23 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 238 CADM4 (ENSODEG00000010861) PLAUR (ENSODEG00000010245) ENSODEG00000019696 IRGC (ENSODEG00000009791) SMG9 (ENSODEG00000010484) KCNN4 (ENSODEG00000008740) LYPD5 (ENSODEG00000008374) ENSODEG00000019532 ZNF45 (ENSODEG00000011301) ZNF227 (ENSODEG00000008802) ENSODEG00000008591 ENSODEG00000010507 ZNF235 (ENSODEG00000008851) ZNF112 (ENSODEG00000009193) ZNF180 (ENSODEG00000010071) ENSODEG00000019539 #22 CEACAM19 (ENSODEG00000008206) CEACAM16 (ENSODEG00000008673) BCL3 (ENSODEG00000009380) CBLC (ENSODEG00000008402) BCAM (ENSODEG00000013187) NECTIN2 (ENSODEG00000008200) ENSODEG00000010615 APOE (ENSODEG00000008747) ENSODEG00000010383 ENSODEG00000011088 APOC2 (ENSODEG00000008478) CLPTM1 (ENSODEG00000008066) RELB (ENSODEG00000008207) CLASRP (ENSODEG00000008407) ZNF296 (ENSODEG00000008238) Degu MODERN SPECIES 320 TAF6L (ENSODEG00000001781) ENSODEG00000018748 ENSODEG00000002048 HNRNPUL2 (ENSODEG00000002142) TTC9C (ENSODEG00000002308) GNG3 (ENSODEG00000002315) #7 UBXN1 (ENSODEG00000002987) #10 UQCC3 (ENSODEG00000003020) #11 INTS5 (ENSODEG00000003038) #15 GANAB (ENSODEG00000003210) #16 B3GAT3 (ENSODEG00000003388) #17 ROM1 (ENSODEG00000003428) #18 EML3 (ENSODEG00000003455) #19 MTA2 (ENSODEG00000003595) #20 TUT1 (ENSODEG00000002204) #21 ENSODEG00000002254 #22 ENSODEG00000002275 ##23 ENSODEG00000002297 ENSODEG00000002313 #24 ENSODEG00000002333 #24 VWCE (ENSODEG00000002356) DDB1 (ENSODEG00000002419) CYB561A3 (ENSODEG00000002516) TKFC (ENSODEG00000002529) TMEM138 (ENSODEG00000002548) TMEM216 (ENSODEG00000002567) CPSF7 (ENSODEG00000002610) SDHAF2 (ENSODEG00000002638) PPP1R32 (ENSODEG00000004127) SYT7 (ENSODEG00000004157) DAGLA (ENSODEG00000004222) #37 Degu MODERN SPECIES 77 ENSODEG00000007521 ADAM7 (ENSODEG00000007547) ADAMDEC1 (ENSODEG00000008034) ADAM28 (ENSODEG00000007875) STC1 (ENSODEG00000007382) NKX2-6 (ENSODEG00000007413) NKX3-1 (ENSODEG00000007004) SLC25A37 (ENSODEG00000007363) ENTPD4 (ENSODEG00000009788) ENSODEG00000009404 LOXL2 (ENSODEG00000006938) R3HCC1 (ENSODEG00000007529) ENSODEG00000019474 ENSODEG00000007294 RHOBTB2 (ENSODEG00000007111) ENSODEG00000008725 #22 EGR3 (ENSODEG00000007442) BIN3 (ENSODEG00000006965) CCAR2 (ENSODEG00000008466) C8orf58 (ENSODEG00000006637) PDLIM2 (ENSODEG00000006028) SORBS3 (ENSODEG00000007179) PPP3CC (ENSODEG00000006004) SLC39A14 (ENSODEG00000006438) ENSODEG00000019353 PIWIL2 (ENSODEG00000009752) POLR3D (ENSODEG00000005884) PHYHIP (ENSODEG00000006421) BMP1 (ENSODEG00000007288) SFTPC (ENSODEG00000007026) LGI3 (ENSODEG00000006726) Rodentia_B ANCESTRAL SPECIES 5 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Kangaroo rat MODERN SPECIES 436 Zbtb3 (ENSDORG00000015697) Ttc9c (ENSDORG00000028105) Hnrnpul2 (ENSDORG00000008678) Gng3 (ENSDORG00000025670) #7 ENSDORG00000024721 Ubxn1 (ENSDORG00000009406) #10 Uqcc3 (ENSDORG00000025423) #11 1810009A15Rik (ENSDORG00000025730) #14 Ints5 (ENSDORG00000025017) #15 Ganab (ENSDORG00000011363) #16 B3gat3 (ENSDORG00000004024) #17 Rom1 (ENSDORG00000004023) #18 Eml3 (ENSDORG00000004021) #19 Mta2 (ENSDORG00000004019) #20 Tut1 (ENSDORG00000004018) #21 Eef1g (ENSDORG00000004017) #22 ENSDORG00000026538 ##23 Asrgl1 (ENSDORG00000014041) #24 ENSDORG00000026990 Incenp (ENSDORG00000009799) #27 Fth1 (ENSDORG00000024132) ##28 ENSDORG00000027094 #29 ENSDORG00000001649 #30 Fads3 (ENSDORG00000001648) #31 Fads2 (ENSDORG00000000340) #32 Fads1 (ENSDORG00000019737) #33 Fen1 (ENSDORG00000002039) #34 Tmem258 (ENSDORG00000002038) #35 Myrf (ENSDORG00000002029) #36 Dagla (ENSDORG00000002025) #37 Syt7 (ENSDORG00000006357) Myomorpha ANCESTRAL SPECIES 4 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Muroidea ANCESTRAL SPECIES 2 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 993 Hnrnpul2 (ENSNGAG00000012005) Gng3 (ENSNGAG00000017324) #7 Bscl2 (ENSNGAG00000001576) #8 Lrrn4cl (ENSNGAG00000019480) #9 Ubxn1 (ENSNGAG00000019771) #10 Uqcc3 (ENSNGAG00000012681) #11 ENSNGAG00000013023 #13 1810009A15Rik (ENSNGAG00000016918) #14 Ints5 (ENSNGAG00000020876) #15 Ganab (ENSNGAG00000001471) #16 B3gat3 (ENSNGAG00000011046) #17 Rom1 (ENSNGAG00000011407) #18 Eml3 (ENSNGAG00000020054) #19 Mta2 (ENSNGAG00000001070) #20 Tut1 (ENSNGAG00000002988) #21 ENSNGAG00000019856 #22 Ahnak (ENSNGAG00000010664) #23 Scgb1a1 (ENSNGAG00000015223) Asrgl1 (ENSNGAG00000017941) #24 Upper Galilee mountains blind mole rat MODERN SPECIES 832 ENSNGAG00000000678 #22 Tnrc6b (ENSNGAG00000021294) Adsl (ENSNGAG00000016522) Sgsm3 (ENSNGAG00000021377) ENSNGAG00000019442 ENSNGAG00000012273 Muroidea_A ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.f.a ENSGT00390000013802.u ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00520000061410 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 16 Hnrnpul2 (ENSMOCG00000020000) Gng3 (ENSMOCG00000020628) #7 ENSMOCG00000009001 Lrrn4cl (ENSMOCG00000009512) #9 Ubxn1 (ENSMOCG00000010707) #10 Uqcc3 (ENSMOCG00000009973) #11 ENSMOCG00000016664 #12 ENSMOCG00000017433 #14 Ints5 (ENSMOCG00000017768) #15 Ganab (ENSMOCG00000021495) #16 B3gat3 (ENSMOCG00000011586) #17 Rom1 (ENSMOCG00000012581) #18 Eml3 (ENSMOCG00000013304) #19 Mta2 (ENSMOCG00000001999) #20 Tut1 (ENSMOCG00000015834) #21 ENSMOCG00000019677 #22 ENSMOCG00000012405 ##23 Scgb1a1 (ENSMOCG00000014419) Asrgl1 (ENSMOCG00000022216) #24 Fam111a (ENSMOCG00000017922) Gm4952 (ENSMOCG00000015076) Glyat (ENSMOCG00000016115) Keg1 (ENSMOCG00000012983) Cntf (ENSMOCG00000016049) Zfp91 (ENSMOCG00000018468) Lpxn (ENSMOCG00000019266) Or5b21 (ENSMOCG00000002067) ENSMOCG00000009033 ENSMOCG00000017684 Or9q1 (ENSMOCG00000009793) Tle4 (ENSMOCG00000011846) Prairie vole MODERN SPECIES 81 Eif3m (ENSMOCG00000020753) Wt1 (ENSMOCG00000006225) Them7 (ENSMOCG00000010419) Rcn1 (ENSMOCG00000011897) Pax6 (ENSMOCG00000017625) Elp4 (ENSMOCG00000009942) Immp1l (ENSMOCG00000000239) Dnajc24 (ENSMOCG00000003631) ENSMOCG00000009178 Mpped2 (ENSMOCG00000002797) Arl14ep (ENSMOCG00000016817) Fshb (ENSMOCG00000019709) Kcna4 (ENSMOCG00000010908) Mettl15 (ENSMOCG00000014905) Kif18a (ENSMOCG00000019106) ENSMOCG00000012556 #22 BDNF (ENSMOCG00000000420) Lin7c (ENSMOCG00000017113) Lgr4 (ENSMOCG00000016806) Ccdc34 (ENSMOCG00000007200) Bbox1 (ENSMOCG00000001592) Fibin (ENSMOCG00000009161) Slc5a12 (ENSMOCG00000015104) Ano3 (ENSMOCG00000021978) Muc15 (ENSMOCG00000015142) Qser1 (ENSMOCG00000001478) Depdc7 (ENSMOCG00000016709) Tcp11l1 (ENSMOCG00000017298) Cstf3 (ENSMOCG00000017583) Hipk3 (ENSMOCG00000002204) D430041D05Rik (ENSMOCG00000003074) Northern American deer mouse MODERN SPECIES Ttc9c (ENSPEMG00000026108) Hnrnpul2 (ENSPEMG00000015546) Gng3 (ENSPEMG00000028724) #7 Bscl2 (ENSPEMG00000031381) #8 Lrrn4cl (ENSPEMG00000016106) #9 Ubxn1 (ENSPEMG00000015778) #10 Uqcc3 (ENSPEMG00000030804) #11 1810009A15Rik (ENSPEMG00000031275) #14 Ints5 (ENSPEMG00000004838) #15 Ganab (ENSPEMG00000003185) #16 B3gat3 (ENSPEMG00000009881) #17 Rom1 (ENSPEMG00000003110) #18 Eml3 (ENSPEMG00000008367) #19 Mta2 (ENSPEMG00000007490) #20 Tut1 (ENSPEMG00000018332) #21 Eef1g (ENSPEMG00000004247) #22 ENSPEMG00000019243 ##23 ENSPEMG00000026154 #23 ENSPEMG00000024701 Scgb1a1 (ENSPEMG00000009557) Asrgl1 (ENSPEMG00000018019) #24 ENSPEMG00000028067 Incenp (ENSPEMG00000008252) #27 ENSPEMG00000020638 Fth1 (ENSPEMG00000017564) ##28 ENSPEMG00000012703 #29 Rab3il1 (ENSPEMG00000011822) #30 Fads3 (ENSPEMG00000012107) #31 Fads2 (ENSPEMG00000015890) #32 Fads1 (ENSPEMG00000008265) #33 Fen1 (ENSPEMG00000009788) #34 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a.d ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 401 Gng3 (ENSCGRG00001014012) #7 Bscl2 (ENSCGRG00001015829) #8 Lrrn4cl (ENSCGRG00001009869) #9 Ubxn1 (ENSCGRG00001006327) #10 Uqcc3 (ENSCGRG00001016702) #11 ENSCGRG00001017126 #12 1810009A15Rik (ENSCGRG00001020427) #14 Ints5 (ENSCGRG00001020963) #15 Ganab (ENSCGRG00001021832) #16 B3GAT3 (ENSCGRG00001023184) #17 Rom1 (ENSCGRG00001013656) #18 Eml3 (ENSCGRG00001015050) #19 Mta2 (ENSCGRG00001005728) #20 Tut1 (ENSCGRG00001017583) #21 ENSCGRG00001010100 ENSCGRG00001013631 #22 Ahnak (ENSCGRG00001009772) #23 Scgb1a1 (ENSCGRG00001017835) Asrgl1 (ENSCGRG00001019390) #24 Scgb2a2 (ENSCGRG00001015765) ##25 Incenp (ENSCGRG00001019028) #27 FTH1 (ENSCGRG00001020220) ##28 ENSCGRG00001014139 #29 Rab3il1 (ENSCGRG00001015063) #30 Fads3 (ENSCGRG00001017095) #31 Fads2 (ENSCGRG00001013858) #32 Fads1 (ENSCGRG00001018831) #33 Fen1 (ENSCGRG00001009889) #34 ENSCGRG00001013240 #35 Myrf (ENSCGRG00001021116) #36 Dagla (ENSCGRG00001004102) #37 Chinese hamster chok1gshd MODERN SPECIES 17 ENSCGRG00001011185 Derl1 (ENSCGRG00001011500) ENSCGRG00001011707 #22 Zhx2 (ENSCGRG00001013209) ENSCGRG00001012456 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 682 ENSMAUG00000016675 #22 Htr1f (ENSMAUG00000006269) Cggbp1 (ENSMAUG00000000993) Zfp654 (ENSMAUG00000000720) ENSMAUG00000012990 Csnka2ip (ENSMAUG00000001425) Epha3 (ENSMAUG00000011923) ENSMAUG00000020620 Stx19 (ENSMAUG00000004341) Arl13b (ENSMAUG00000017043) Nsun3 (ENSMAUG00000013661) ENSMAUG00000000427 Epha6 (ENSMAUG00000005573) Arl6 (ENSMAUG00000016932) ENSMAUG00000003633 Riox2 (ENSMAUG00000015559) Golden Hamster MODERN SPECIES 658 Scg3 (ENSMAUG00000009353) Lysmd2 (ENSMAUG00000006540) Tmod2 (ENSMAUG00000010992) Tmod3 (ENSMAUG00000016527) Leo1 (ENSMAUG00000021013) ENSMAUG00000002809 ENSMAUG00000007608 Gnb5 (ENSMAUG00000008570) Myo5c (ENSMAUG00000019952) Myo5a (ENSMAUG00000001195) ENSMAUG00000013200 Atosa (ENSMAUG00000017090) Onecut1 (ENSMAUG00000017863) Wdr72 (ENSMAUG00000019773) Unc13c (ENSMAUG00000014928) ENSMAUG00000012949 #22 Rsl24d1 (ENSMAUG00000011146) Rab27a (ENSMAUG00000013740) Pigb (ENSMAUG00000009724) Ccpg1 (ENSMAUG00000021179) Pierce2 (ENSMAUG00000021207) Dnaaf4 (ENSMAUG00000012975) Pygo1 (ENSMAUG00000007751) Prtg (ENSMAUG00000021146) Nedd4 (ENSMAUG00000003802) Rfx7 (ENSMAUG00000016583) Tex9 (ENSMAUG00000004928) Mns1 (ENSMAUG00000019303) Zfp280d (ENSMAUG00000019648) Murinae ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.f.a.a.a ENSGT00530000063866.f.a.b ENSGT00390000013802.u ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 Mus ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Shrew mouse MODERN SPECIES Zbtb3 (MGP_PahariEiJ_G0014149) Ttc9c (MGP_PahariEiJ_G0014150) Hnrnpul2 (MGP_PahariEiJ_G0014151) Gng3 (MGP_PahariEiJ_G0014152) #7 Bscl2 (MGP_PahariEiJ_G0014153) #8 Lrrn4cl (MGP_PahariEiJ_G0014154) #9 Ubxn1 (MGP_PahariEiJ_G0014155) #10 Uqcc3 (MGP_PahariEiJ_G0014156) #11 Ints5 (MGP_PahariEiJ_G0014158) #15 Ganab (MGP_PahariEiJ_G0014159) #16 B3gat3 (MGP_PahariEiJ_G0014160) #17 Rom1 (MGP_PahariEiJ_G0014161) #18 Eml3 (MGP_PahariEiJ_G0014162) #19 Mta2 (MGP_PahariEiJ_G0014163) #20 Tut1 (MGP_PahariEiJ_G0014164) #21 Eef1g (MGP_PahariEiJ_G0014165) #22 MGP_PahariEiJ_G0014166 #23 Scgb1a1 (MGP_PahariEiJ_G0014167) Asrgl1 (MGP_PahariEiJ_G0014168) #24 Incenp (MGP_PahariEiJ_G0014169) #27 Fth1 (MGP_PahariEiJ_G0014170) ##28 Best1 (MGP_PahariEiJ_G0014171) #29 Rab3il1 (MGP_PahariEiJ_G0014172) #30 Fads3 (MGP_PahariEiJ_G0014173) #31 Fads2 (MGP_PahariEiJ_G0014174) #32 Fads1 (MGP_PahariEiJ_G0014175) #33 Fen1 (MGP_PahariEiJ_G0014176) #34 Tmem258 (MGP_PahariEiJ_G0014177) #35 Myrf (MGP_PahariEiJ_G0014178) #36 MGP_PahariEiJ_G0014179 Syt7 (MGP_PahariEiJ_G0014180) Mus_A ANCESTRAL SPECIES 16 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Ryukyu mouse MODERN SPECIES 10 Hnrnpul2 (MGP_CAROLIEiJ_G0022656) Gng3 (MGP_CAROLIEiJ_G0022657) #7 Bscl2 (MGP_CAROLIEiJ_G0022658) #8 Lrrn4cl (MGP_CAROLIEiJ_G0022659) #9 Ubxn1 (MGP_CAROLIEiJ_G0022660) #10 Uqcc3 (MGP_CAROLIEiJ_G0022661) #11 MGP_CAROLIEiJ_G0022662 #12 MGP_CAROLIEiJ_G0022663 #14 Ints5 (MGP_CAROLIEiJ_G0022664) #15 Ganab (MGP_CAROLIEiJ_G0022665) #16 B3gat3 (MGP_CAROLIEiJ_G0022666) #17 Rom1 (MGP_CAROLIEiJ_G0022667) #18 Eml3 (MGP_CAROLIEiJ_G0022668) #19 Mta2 (MGP_CAROLIEiJ_G0022669) #20 Tut1 (MGP_CAROLIEiJ_G0022670) #21 Eef1g (MGP_CAROLIEiJ_G0022671) #22 MGP_CAROLIEiJ_G0022672 ##23 Scgb1a1 (MGP_CAROLIEiJ_G0022673) Asrgl1 (MGP_CAROLIEiJ_G0022674) #24 Incenp (MGP_CAROLIEiJ_G0022675) #27 Fth1 (MGP_CAROLIEiJ_G0022676) ##28 Best1 (MGP_CAROLIEiJ_G0022677) #29 Rab3il1 (MGP_CAROLIEiJ_G0022678) #30 Fads3 (MGP_CAROLIEiJ_G0022679) #31 Fads2 (MGP_CAROLIEiJ_G0022680) #32 Fads1 (MGP_CAROLIEiJ_G0022681) #33 Fen1 (MGP_CAROLIEiJ_G0022682) #34 Tmem258 (MGP_CAROLIEiJ_G0022683) #35 Myrf (MGP_CAROLIEiJ_G0022684) #36 Dagla (MGP_CAROLIEiJ_G0022685) #37 Syt7 (MGP_CAROLIEiJ_G0022686) Mus_B ANCESTRAL SPECIES 16 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u.a ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Mouse MODERN SPECIES 10 Gng3 (ENSMUSG00000071658) #7 Bscl2 (ENSMUSG00000071657) #8 Lrrn4cl (ENSMUSG00000071656) #9 Ubxn1 (ENSMUSG00000071655) #10 Uqcc3 (ENSMUSG00000071654) #11 Lbhd1 (ENSMUSG00000096740) 1810009A15Rik (ENSMUSG00000071653) #14 Gm49416 (ENSMUSG00000116347) Ints5 (ENSMUSG00000071652) #15 Ganab (ENSMUSG00000071650) #16 B3gat3 (ENSMUSG00000071649) #17 Rom1 (ENSMUSG00000071648) #18 Eml3 (ENSMUSG00000071647) #19 Mta2 (ENSMUSG00000071646) #20 Tut1 (ENSMUSG00000071645) #21 Eef1g (ENSMUSG00000071644) #22 Ahnak (ENSMUSG00000069833) #23 Scgb1a1 (ENSMUSG00000024653) Asrgl1 (ENSMUSG00000024654) #24 Scgb2a2 (ENSMUSG00000096872) ##25 Incenp (ENSMUSG00000024660) #27 Fth1 (ENSMUSG00000024661) ##28 Best1 (ENSMUSG00000037418) #29 Rab3il1 (ENSMUSG00000024663) #30 Fads3 (ENSMUSG00000024664) #31 Fads2 (ENSMUSG00000024665) #32 Fads1 (ENSMUSG00000010663) #33 Fen1 (ENSMUSG00000024742) #34 Tmem258 (ENSMUSG00000036372) #35 Myrf (ENSMUSG00000036098) #36 Dagla (ENSMUSG00000035735) #37 Mus_C ANCESTRAL SPECIES 25 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802.u.a ##25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2399 Uqcc3 (ENSMSIG00000030087) #11 ENSMSIG00000030086 #12 1810009A15Rik (ENSMSIG00000030082) #14 Ints5 (ENSMSIG00000030081) #15 Ganab (ENSMSIG00000030073) #16 B3gat3 (ENSMSIG00000030069) #17 Rom1 (ENSMSIG00000030067) #18 Eml3 (ENSMSIG00000030059) #19 Mta2 (ENSMSIG00000030052) #20 Tut1 (ENSMSIG00000030047) #21 ENSMSIG00000030044 #22 ENSMSIG00000030038 #23 ENSMSIG00000030024 ##23 Scgb1a1 (ENSMSIG00000030022) Asrgl1 (ENSMSIG00000030021) #24 Steppe mouse MODERN SPECIES 38 Gfra1 (ENSMSIG00000028497) Ccdc172 (ENSMSIG00000028482) Pnlip (ENSMSIG00000028475) Pnliprp1 (ENSMSIG00000028468) Pnliprp2 (ENSMSIG00000028454) 1700019N19Rik (ENSMSIG00000028440) Hspa12a (ENSMSIG00000028425) Eno4 (ENSMSIG00000028394) Shtn1 (ENSMSIG00000028359) ENSMSIG00000028327 #22 Vax1 (ENSMSIG00000028320) ENSMSIG00000028314 Kcnk18 (ENSMSIG00000028309) Slc18a2 (ENSMSIG00000028291) Pdzd8 (ENSMSIG00000028285) Emx2 (ENSMSIG00000028276) Rab11fip2 (ENSMSIG00000028250) Fam204a (ENSMSIG00000028227) Prlhr (ENSMSIG00000028226) Cacul1 (ENSMSIG00000028208) Nanos1 (ENSMSIG00000028205) Eif3a (ENSMSIG00000028178) ENSMSIG00000028172 Dennd10 (ENSMSIG00000028163) Sfxn4 (ENSMSIG00000028157) spretus MODERN SPECIES 10 Hnrnpul2 (MGP_SPRETEiJ_G0023569) Gng3 (MGP_SPRETEiJ_G0023570) #7 Bscl2 (MGP_SPRETEiJ_G0023571) #8 Lrrn4cl (MGP_SPRETEiJ_G0023572) #9 Ubxn1 (MGP_SPRETEiJ_G0023573) #10 Uqcc3 (MGP_SPRETEiJ_G0023574) #11 MGP_SPRETEiJ_G0023575 #12 1810009A15Rik (MGP_SPRETEiJ_G0023576) #14 Ints5 (MGP_SPRETEiJ_G0023577) #15 Ganab (MGP_SPRETEiJ_G0023578) #16 B3gat3 (MGP_SPRETEiJ_G0023579) #17 Rom1 (MGP_SPRETEiJ_G0023580) #18 Eml3 (MGP_SPRETEiJ_G0023581) #19 Mta2 (MGP_SPRETEiJ_G0023582) #20 Tut1 (MGP_SPRETEiJ_G0023583) #21 Eef1g (MGP_SPRETEiJ_G0023584) #22 Ahnak (MGP_SPRETEiJ_G0023585) #23 Scgb1a1 (MGP_SPRETEiJ_G0023586) Asrgl1 (MGP_SPRETEiJ_G0023587) #24 Scgb2a2 (MGP_SPRETEiJ_G0023588) ##25 Incenp (MGP_SPRETEiJ_G0023589) #27 Fth1 (MGP_SPRETEiJ_G0023590) ##28 Best1 (MGP_SPRETEiJ_G0023591) #29 Rab3il1 (MGP_SPRETEiJ_G0023592) #30 Fads3 (MGP_SPRETEiJ_G0023593) #31 Fads2 (MGP_SPRETEiJ_G0023594) #32 Fads1 (MGP_SPRETEiJ_G0023595) #33 Fen1 (MGP_SPRETEiJ_G0023596) #34 Tmem258 (MGP_SPRETEiJ_G0023597) #35 Myrf (MGP_SPRETEiJ_G0023598) #36 Dagla (MGP_SPRETEiJ_G0023599) #37 Rat DUPLICATION Rat MODERN SPECIES Polr2g (ENSRNOG00000019439) Ttc9c (ENSRNOG00000019464) Hnrnpul2 (ENSRNOG00000019507) Gng3 (ENSRNOG00000019570) #7 Bscl2 (ENSRNOG00000052393) #8 Ubxn1 (ENSRNOG00000019666) #10 Uqcc3 (ENSRNOG00000045561) #11 Gm49403 (ENSRNOG00000064559) #12 C1h11orf98 (ENSRNOG00000019701) #14 Ints5 (ENSRNOG00000026005) #15 Ganab (ENSRNOG00000019724) #16 B3gat3 (ENSRNOG00000019873) #19 Rom1 (ENSRNOG00000019858) #18 Mta2 (ENSRNOG00000019913) #20 Tut1 (ENSRNOG00000020047) #21 Eef1g (ENSRNOG00000020075) #22 Ahnak (ENSRNOG00000057569) #23 Scgb1a1 (ENSRNOG00000020196) Asrgl1 (ENSRNOG00000020202) #24 Scgb1d2 (ENSRNOG00000020294) Scgb1d4 (ENSRNOG00000020301) Scgb2a1 (ENSRNOG00000020305) ##25 AABR07006242.1 (ENSRNOG00000028909) Scgb2a1 (ENSRNOG00000023151) ##25 ENSRNOG00000062718 Incenp (ENSRNOG00000032929) #27 Fth1 (ENSRNOG00000022619) ##28 Best1 (ENSRNOG00000020346) #29 AABR07006255.1 (ENSRNOG00000036633) Rab3il1 (ENSRNOG00000020349) #30 Fads3 (ENSRNOG00000020385) #31 Rat DUPLICATION Rat MODERN SPECIES 4 Igsf8 (ENSRNOG00000007604) Atp1a2 (ENSRNOG00000007290) Atp1a4 (ENSRNOG00000032378) Casq1 (ENSRNOG00000006930) Pea15 (ENSRNOG00000046996) Dcaf8 (ENSRNOG00000006785) LOC102548286 (ENSRNOG00000057116) Copa (ENSRNOG00000006247) Ncstn (ENSRNOG00000005355) Nhlh1 (ENSRNOG00000005166) Vangl2 (ENSRNOG00000004889) Slamf6 (ENSRNOG00000038286) Cd84 (ENSRNOG00000022884) Slamf1 (ENSRNOG00000059073) Cd48 (ENSRNOG00000004737) ENSRNOG00000062700 #22 Slamf7 (ENSRNOG00000023209) Ly9 (ENSRNOG00000025069) Cd244 (ENSRNOG00000064255) Cd244 (ENSRNOG00000068754) Itln1 (ENSRNOG00000004678) LOC100359583 (ENSRNOG00000025731) F11r (ENSRNOG00000004414) ENSRNOG00000068856 Arhgap30 (ENSRNOG00000004192) Tstd1 (ENSRNOG00000004255) Nectin4 (ENSRNOG00000004029) Klhdc9 (ENSRNOG00000004022) Nit1 (ENSRNOG00000003881) Dedd (ENSRNOG00000003779) Pfdn2 (ENSRNOG00000066932) Rat MODERN SPECIES 15 Pusl1 (ENSRNOG00000022354) Ints11 (ENSRNOG00000019712) Cptp (ENSRNOG00000022455) Tas1r3 (ENSRNOG00000019589) Dvl1 (ENSRNOG00000019423) Mxra8 (ENSRNOG00000019244) Ccnl2 (ENSRNOG00000018691) Mrpl20 (ENSRNOG00000018647) Ankrd65 (ENSRNOG00000043331) Tmem88b (ENSRNOG00000036869) Vwa1 (ENSRNOG00000018338) Atad3a (ENSRNOG00000018118) Tmem240 (ENSRNOG00000066137) Ssu72 (ENSRNOG00000017829) LOC100364191 (ENSRNOG00000030447) ENSRNOG00000065253 #22 Mib2 (ENSRNOG00000017564) Mmp23 (ENSRNOG00000017477) Cdk11b (ENSRNOG00000017213) Slc35e2b (ENSRNOG00000017075) Nadk (ENSRNOG00000016936) Gnb1 (ENSRNOG00000016638) Tmem52 (ENSRNOG00000016618) Cfap74 (ENSRNOG00000023627) Gabrd (ENSRNOG00000016385) Prkcz (ENSRNOG00000015480) Faap20 (ENSRNOG00000036876) Ski (ENSRNOG00000055340) Morn1 (ENSRNOG00000014642) Rer1 (ENSRNOG00000014270) Pex10 (ENSRNOG00000024012) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 60 ENSJJAG00000008957 Hnrnpul2 (ENSJJAG00000011206) Gng3 (ENSJJAG00000015400) #7 ENSJJAG00000019301 #8 Ubxn1 (ENSJJAG00000012631) #10 Uqcc3 (ENSJJAG00000022865) #11 ENSJJAG00000011273 #12 1810009A15Rik (ENSJJAG00000010598) #14 Ints5 (ENSJJAG00000013000) #15 Ganab (ENSJJAG00000024016) #16 B3gat3 (ENSJJAG00000023873) #17 Rom1 (ENSJJAG00000016209) #18 Eml3 (ENSJJAG00000001007) #19 Mta2 (ENSJJAG00000001163) #20 Tut1 (ENSJJAG00000022329) #21 Eef1g (ENSJJAG00000019511) #22 ENSJJAG00000015059 #23 Scgb1a1 (ENSJJAG00000013224) Asrgl1 (ENSJJAG00000021275) #24 Lesser Egyptian jerboa MODERN SPECIES 45 ENSJJAG00000022712 Gxylt2 (ENSJJAG00000013774) Shq1 (ENSJJAG00000017611) Rybp (ENSJJAG00000017045) Prok2 (ENSJJAG00000021320) Gpr27 (ENSJJAG00000011153) Eif4e3 (ENSJJAG00000002638) Foxp1 (ENSJJAG00000022621) Mdfic2 (ENSJJAG00000012963) Mitf (ENSJJAG00000018472) Frmd4b (ENSJJAG00000023390) Minar2 (ENSJJAG00000000279) Adamts19 (ENSJJAG00000021431) Isoc1 (ENSJJAG00000019157) Slc27a6 (ENSJJAG00000020519) ENSJJAG00000017710 #22 Fbn2 (ENSJJAG00000020592) Slc12a2 (ENSJJAG00000019580) ENSJJAG00000017426 Ctxn3 (ENSJJAG00000011014) Prrc1 (ENSJJAG00000011454) Crhbp (ENSJJAG00000010630) S100z (ENSJJAG00000013195) ENSJJAG00000018088 F2rl1 (ENSJJAG00000005361) F2r (ENSJJAG00000021467) Iqgap2 (ENSJJAG00000023927) F2rl2 (ENSJJAG00000020545) Sv2c (ENSJJAG00000012121) Poc5 (ENSJJAG00000019666) Ankdd1b (ENSJJAG00000013237) Lagomorpha ANCESTRAL SPECIES ENSGT00390000007552.f #22 Pika MODERN SPECIES 2658 POLR2G (ENSOPRG00000014769) ENSOPRG00000014743 HNRNPUL2 (ENSOPRG00000014724) GNG3 (ENSOPRG00000014720) #7 BSCL2 (ENSOPRG00000018314) #8 UBXN1 (ENSOPRG00000014688) #10 UQCC3 (ENSOPRG00000014686) #11 CSKMT (ENSOPRG00000018764) #13 LBHD1 (ENSOPRG00000014680) #12 INTS5 (ENSOPRG00000014673) #15 GANAB (ENSOPRG00000014645) #16 B3GAT3 (ENSOPRG00000014636) #17 ROM1 (ENSOPRG00000014631) #18 EML3 (ENSOPRG00000014597) #19 MTA2 (ENSOPRG00000014575) #20 EEF1G (ENSOPRG00000014563) #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 5 TSC22D2 (ENSOCUG00000016074) SERP1 (ENSOCUG00000016085) EIF2A (ENSOCUG00000016095) SELENOT (ENSOCUG00000013866) ERICH6 (ENSOCUG00000008304) SIAH2 (ENSOCUG00000010373) MINDY4B (ENSOCUG00000029551) CLRN1 (ENSOCUG00000013347) MED12L (ENSOCUG00000005851) GPR171 (ENSOCUG00000005877) P2RY14 (ENSOCUG00000005879) IGSF10 (ENSOCUG00000005885) P2RY13 (ENSOCUG00000000418) ENSOCUG00000025667 ENSOCUG00000005140 ENSOCUG00000021109 #22 AADAC (ENSOCUG00000005368) SUCNR1 (ENSOCUG00000014135) ENSOCUG00000034635 MBNL1 (ENSOCUG00000007601) ENSOCUG00000024369 P2RY1 (ENSOCUG00000010828) RAP2B (ENSOCUG00000014398) ENSOCUG00000027959 ENSOCUG00000036257 ARHGEF26 (ENSOCUG00000001179) DHX36 (ENSOCUG00000001180) ENSOCUG00000038376 MME (ENSOCUG00000017924) ENSOCUG00000036761 ENSOCUG00000030899 Rabbit MODERN SPECIES 511 ZMYND11 (ENSOCUG00000027497) ENSOCUG00000024328 #22 DIP2C (ENSOCUG00000007803) ENSOCUG00000004950 ENSOCUG00000016120 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Eulipotyphla ANCESTRAL SPECIES 41 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 Hedgehog MODERN SPECIES 7825 MTA2 (ENSEEUG00000001294) #20 TUT1 (ENSEEUG00000001238) #21 EEF1G (ENSEEUG00000001231) #22 Common shrew MODERN SPECIES 12103 EEF1G (ENSSARG00000011232) #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Artiodactyla ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Camelidae ANCESTRAL SPECIES 55 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Arabian camel MODERN SPECIES 1 HNRNPUL2 (ENSCDRG00005005188) GNG3 (ENSCDRG00005005252) #7 BSCL2 (ENSCDRG00005005265) #8 LRRN4CL (ENSCDRG00005005348) #9 UBXN1 (ENSCDRG00005005366) #10 UQCC3 (ENSCDRG00005005440) #11 LBHD1 (ENSCDRG00005005473) #12 CSKMT (ENSCDRG00005005533) #13 INTS5 (ENSCDRG00005005552) #15 GANAB (ENSCDRG00005005585) #16 B3GAT3 (ENSCDRG00005005790) #17 ROM1 (ENSCDRG00005005805) #18 EML3 (ENSCDRG00005005818) #19 MTA2 (ENSCDRG00005005973) #20 TUT1 (ENSCDRG00005006030) #21 EEF1G (ENSCDRG00005006080) #22 ENSCDRG00005006109 ##23 ENSCDRG00005006152 #23 SCGB1A1 (ENSCDRG00005006201) ASRGL1 (ENSCDRG00005006211) #24 ENSCDRG00005006247 #25 ENSCDRG00005006269 #23 ENSCDRG00005006356 #25 ENSCDRG00005006418 #25 ENSCDRG00005006462 #25 ENSCDRG00005006491 INCENP (ENSCDRG00005006531) #27 ENSCDRG00005006575 #28 BEST1 (ENSCDRG00005006707) #29 RAB3IL1 (ENSCDRG00005006782) #30 FADS2 (ENSCDRG00005007121) #32 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Pecora ANCESTRAL SPECIES 13 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 11 HNRNPUL2 (ENSCHYG00000017808) GNG3 (ENSCHYG00000017765) #7 BSCL2 (ENSCHYG00000017544) #8 LRRN4CL (ENSCHYG00000017512) #9 UBXN1 (ENSCHYG00000017331) #10 UQCC3 (ENSCHYG00000017276) #11 LBHD1 (ENSCHYG00000017004) #12 CSKMT (ENSCHYG00000016962) #13 INTS5 (ENSCHYG00000016919) #15 GANAB (ENSCHYG00000016139) #16 B3GAT3 (ENSCHYG00000015841) #17 ROM1 (ENSCHYG00000015732) #18 EML3 (ENSCHYG00000015378) #19 MTA2 (ENSCHYG00000015186) #20 TUT1 (ENSCHYG00000015098) #21 EEF1G (ENSCHYG00000014986) #22 ENSCHYG00000014832 #23 ENSCHYG00000014697 ##23 ENSCHYG00000014657 ASRGL1 (ENSCHYG00000014526) #24 ENSCHYG00000014496 #25 ENSCHYG00000014447 INCENP (ENSCHYG00000014341) #27 ENSCHYG00000014297 ENSCHYG00000014166 ##28 BEST1 (ENSCHYG00000014024) #29 RAB3IL1 (ENSCHYG00000013498) #30 FADS3 (ENSCHYG00000013278) #31 ENSCHYG00000012672 #32 FADS1 (ENSCHYG00000012487) #33 ENSCHYG00000012454 Yarkand deer MODERN SPECIES 1323 VAMP7 (ENSCHYG00000017918) SPRY3 (ENSCHYG00000018105) ENSCHYG00000018139 CLIC2 (ENSCHYG00000018163) RAB39B (ENSCHYG00000018283) ENSCHYG00000018338 ENSCHYG00000018655 MTCP1 (ENSCHYG00000018801) CMC4 (ENSCHYG00000018917) FUNDC2 (ENSCHYG00000018987) F8 (ENSCHYG00000019104) ENSCHYG00000020059 #22 MPP1 (ENSCHYG00000020123) DKC1 (ENSCHYG00000020555) GAB3 (ENSCHYG00000020865) ENSCHYG00000021132 ENSCHYG00000021194 ENSCHYG00000021240 ENSCHYG00000021269 ENSCHYG00000021292 FLNA (ENSCHYG00000021422) ENSCHYG00000022474 DNASE1L1 (ENSCHYG00000022608) TAFAZZIN (ENSCHYG00000022770) ATP6AP1 (ENSCHYG00000023535) GDI1 (ENSCHYG00000023645) PLXNA3 (ENSCHYG00000023890) Percora_a ANCESTRAL SPECIES 16 ENSGT00940000161486 ENSGT00940000161805.p ENSGT00940000160376 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Siberian musk deer MODERN SPECIES 1224 HNRNPUL2 (ENSMMSG00000012673) BSCL2 (ENSMMSG00000012721) #8 ENSMMSG00000012801 #7 LRRN4CL (ENSMMSG00000012817) #9 UBXN1 (ENSMMSG00000012852) #10 UQCC3 (ENSMMSG00000012897) #11 LBHD1 (ENSMMSG00000012923) #12 CSKMT (ENSMMSG00000012987) #13 INTS5 (ENSMMSG00000013012) #15 GANAB (ENSMMSG00000013077) #16 B3GAT3 (ENSMMSG00000013309) #17 ENSMMSG00000013341 #18 EML3 (ENSMMSG00000013365) #19 MTA2 (ENSMMSG00000013445) #20 TUT1 (ENSMMSG00000013495) #21 EEF1G (ENSMMSG00000013530) #22 ENSMMSG00000013555 ##23 ENSMMSG00000013596 #23 SCGB1A1 (ENSMMSG00000013623) ENSMMSG00000013643 #24 ENSMMSG00000013664 #25 ENSMMSG00000013681 INCENP (ENSMMSG00000013713) #27 ENSMMSG00000013740 ##28 BEST1 (ENSMMSG00000013766) #29 RAB3IL1 (ENSMMSG00000013829) #30 FADS3 (ENSMMSG00000013946) #31 ENSMMSG00000014017 #32 FADS1 (ENSMMSG00000014104) #33 ENSMMSG00000014149 FEN1 (ENSMMSG00000014163) #34 Bovidae ANCESTRAL SPECIES 16 ENSGT00940000161486 ENSGT00940000161805.p ENSGT00940000160376 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Bovinae ANCESTRAL SPECIES 24 ENSGT00940000161486 ENSGT00940000161805.p ENSGT00940000160376 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 American bison DUPLICATION American bison MODERN SPECIES 3248 HNRNPUL2 (ENSBBBG00000019515) GNG3 (ENSBBBG00000019496) #7 BSCL2 (ENSBBBG00000005208) #8 LRRN4CL (ENSBBBG00000019428) #9 UBXN1 (ENSBBBG00000009187) #10 UQCC3 (ENSBBBG00000019369) #11 LBHD1 (ENSBBBG00000019358) #12 CSKMT (ENSBBBG00000007511) #13 INTS5 (ENSBBBG00000005016) #15 GANAB (ENSBBBG00000019296) #16 B3GAT3 (ENSBBBG00000004913) #17 ROM1 (ENSBBBG00000019099) #18 EML3 (ENSBBBG00000019090) #19 MTA2 (ENSBBBG00000019072) #20 TUT1 (ENSBBBG00000019032) #21 EEF1G (ENSBBBG00000019015) #22 ENSBBBG00000018998 ##23 ENSBBBG00000004835 #23 ENSBBBG00000018961 ASRGL1 (ENSBBBG00000004812) #24 ENSBBBG00000018946 #25 ENSBBBG00000004805 INCENP (ENSBBBG00000018936) #27 ENSBBBG00000018919 ##28 BEST1 (ENSBBBG00000004787) #29 RAB3IL1 (ENSBBBG00000018902) #30 FADS3 (ENSBBBG00000018899) #31 ENSBBBG00000004767 #32 FADS1 (ENSBBBG00000018803) #33 FEN1 (ENSBBBG00000008945) #34 ENSBBBG00000004696 ##35 American bison MODERN SPECIES 3240 ENSBBBG00000017613 LINGO2 (ENSBBBG00000017617) C9orf72 (ENSBBBG00000017654) IFNK (ENSBBBG00000017664) MOB3B (ENSBBBG00000017671) TEK (ENSBBBG00000008384) LRRC19 (ENSBBBG00000017856) IFT74 (ENSBBBG00000017924) PLAA (ENSBBBG00000017959) CAAP1 (ENSBBBG00000017988) ENSBBBG00000004430 TUSC1 (ENSBBBG00000008010) IZUMO3 (ENSBBBG00000018026) ELAVL2 (ENSBBBG00000018068) DMRTA1 (ENSBBBG00000018078) ENSBBBG00000004445 #22 ENSBBBG00000018086 ENSBBBG00000018093 CDKN2A (ENSBBBG00000007436) MTAP (ENSBBBG00000018131) IFNE (ENSBBBG00000018139) ENSBBBG00000006857 ENSBBBG00000018145 ENSBBBG00000009067 ENSBBBG00000018163 ENSBBBG00000018170 Bos ANCESTRAL SPECIES 10 ENSGT01000000214430.b ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00550000074873.bb.b ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00390000007552.f #22 ENSGT00940000165099 ENSGT00950000182991.B.y ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT00950000182991.B.z ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.b ENSGT01000000214430.a.a.a.a.a.b.ab ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.b.g.b ENSGT01000000214430.a.a.a.a.a.a.b.l.a.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.b.a.a.a.a Bos_a ANCESTRAL SPECIES 50 ENSGT00940000156665 ENSGT00390000005644 ENSGT01000000214430.b ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00550000074873.bb.b ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000162423 ENSGT00950000182991.B.y ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.a Wild yak MODERN SPECIES 1714 HNRNPUL2 (ENSBMUG00000023420) GNG3 (ENSBMUG00000023415) #7 BSCL2 (ENSBMUG00000023406) #8 UBXN1 (ENSBMUG00000023388) #10 UQCC3 (ENSBMUG00000023373) #11 CSKMT (ENSBMUG00000023360) #13 ENSBMUG00000023348 #14 INTS5 (ENSBMUG00000023343) #15 GANAB (ENSBMUG00000023315) #16 B3GAT3 (ENSBMUG00000023252) #17 ROM1 (ENSBMUG00000023222) #18 EML3 (ENSBMUG00000023212) #19 ENSBMUG00000023148 #20 ENSBMUG00000023138 #20 TUT1 (ENSBMUG00000023128) #21 EEF1G (ENSBMUG00000023113) #22 ENSBMUG00000023096 #23 ENSBMUG00000023076 ##23 Domestic yak MODERN SPECIES 26 ENSBGRG00000001152 C9orf72 (ENSBGRG00000001111) ENSBGRG00000001104 MOB3B (ENSBGRG00000001067) ENSBGRG00000001020 TEK (ENSBGRG00000000666) LRRC19 (ENSBGRG00000000556) IFT74 (ENSBGRG00000000512) PLAA (ENSBGRG00000000455) CAAP1 (ENSBGRG00000000429) ENSBGRG00000000412 TUSC1 (ENSBGRG00000002852) IZUMO3 (ENSBGRG00000002804) ELAVL2 (ENSBGRG00000002663) DMRTA1 (ENSBGRG00000002642) ENSBGRG00000002626 #22 ENSBGRG00000002560 ENSBGRG00000002533 IFNE (ENSBGRG00000002520) ENSBGRG00000002505 ENSBGRG00000002476 ENSBGRG00000002472 ENSBGRG00000002462 ENSBGRG00000002456 ENSBGRG00000002447 ENSBGRG00000002442 ENSBGRG00000002439 ENSBGRG00000002434 KLHL9 (ENSBGRG00000002421) ENSBGRG00000002413 ENSBGRG00000002407 Bos_b ANCESTRAL SPECIES 3 ENSGT00390000005644 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00950000184123 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00550000074873.bb.b ENSGT01100000263474.a.b.b.f.g.a.a.a ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00390000007552.f #22 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.z ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b.b ENSGT01000000214430.a.a.a.a.a.b.ab ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.b Hybrid Bos Indicus MODERN SPECIES 27 C9orf72 (ENSBIXG00005026955) IFNK (ENSBIXG00005004601) ENSBIXG00005002481 TEK (ENSBIXG00005026764) IFT74 (ENSBIXG00005004546) LRRC19 (ENSBIXG00005026561) PLAA (ENSBIXG00005026552) ENSBIXG00005026532 CAAP1 (ENSBIXG00005026525) ENSBIXG00005004531 ENSBIXG00005026478 TUSC1 (ENSBIXG00005004523) IZUMO3 (ENSBIXG00005026432) ELAVL2 (ENSBIXG00005026326) DMRTA1 (ENSBIXG00005026148) ENSBIXG00005007636 #22 CDKN2B (ENSBIXG00005004453) CDKN2A (ENSBIXG00005026038) MTAP (ENSBIXG00005004427) ENSBIXG00005025926 ENSBIXG00005007739 ENSBIXG00005025752 ENSBIXG00005025679 ENSBIXG00005025672 ENSBIXG00005025621 ENSBIXG00005025592 ENSBIXG00005025571 ENSBIXG00005025546 ENSBIXG00005025521 ENSBIXG00005005565 KLHL9 (ENSBIXG00005004321) Cow MODERN SPECIES 21 HNRNPUL2 (ENSBTAG00000002510) GNG3 (ENSBTAG00000002508) #7 BSCL2 (ENSBTAG00000002503) #8 LRRN4CL (ENSBTAG00000010484) #9 UBXN1 (ENSBTAG00000010481) #10 UQCC3 (ENSBTAG00000010470) #11 CSKMT (ENSBTAG00000022293) #13 C29H11orf98 (ENSBTAG00000010465) #14 INTS5 (ENSBTAG00000010455) #15 GANAB (ENSBTAG00000016956) #16 B3GAT3 (ENSBTAG00000016950) #17 ROM1 (ENSBTAG00000001188) #18 EML3 (ENSBTAG00000011872) #19 MTA2 (ENSBTAG00000011865) #20 TUT1 (ENSBTAG00000011846) #21 EEF1G (ENSBTAG00000011843) #22 AHNAK (ENSBTAG00000013468) #23 SCGB1A1 (ENSBTAG00000032918) ASRGL1 (ENSBTAG00000006910) #24 SCGB2A2 (ENSBTAG00000015940) #25 SCGB1D (ENSBTAG00000040070) INCENP (ENSBTAG00000050061) #27 FTH1 (ENSBTAG00000011184) ##28 BEST1 (ENSBTAG00000011186) #29 RAB3IL1 (ENSBTAG00000015745) #30 FADS3 (ENSBTAG00000015511) #31 FADS2 (ENSBTAG00000015505) #32 FADS1 (ENSBTAG00000022294) #33 ENSBTAG00000053898 FEN1 (ENSBTAG00000000064) #34 TMEM258 (ENSBTAG00000032557) ##35 Caprinae ANCESTRAL SPECIES 20 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Rambouillet Sheep MODERN SPECIES 13 HNRNPUL2 (ENSOARG00020021145) GNG3 (ENSOARG00020021111) #7 BSCL2 (ENSOARG00020021030) #8 LRRN4CL (ENSOARG00020021003) #9 UBXN1 (ENSOARG00020020882) #10 UQCC3 (ENSOARG00020020837) #11 CSKMT (ENSOARG00020020799) #13 C11orf98 (ENSOARG00020020766) #14 INTS5 (ENSOARG00020020736) #15 GANAB (ENSOARG00020019614) #16 B3GAT3 (ENSOARG00020019536) #17 ROM1 (ENSOARG00020019491) #18 EML3 (ENSOARG00020019331) #19 MTA2 (ENSOARG00020019166) #20 TUT1 (ENSOARG00020019099) #21 EEF1G (ENSOARG00020019042) #22 ENSOARG00020018899 ##23 SCGB1A1 (ENSOARG00020018859) ASRGL1 (ENSOARG00020018816) #24 ENSOARG00020018768 #25 ENSOARG00020018723 INCENP (ENSOARG00020018586) #27 FTH1 (ENSOARG00020018402) ##28 BEST1 (ENSOARG00020018322) #29 RAB3IL1 (ENSOARG00020017922) #30 FADS3 (ENSOARG00020017693) #31 ENSOARG00020017431 #32 FADS1 (ENSOARG00020017320) #33 ENSOARG00020017287 FEN1 (ENSOARG00020017260) #34 ENSOARG00020017205 ##35 Goat DUPLICATION Goat MODERN SPECIES 1 ENSCHIG00000003392 LRRC9 (ENSCHIG00000025206) PCNX4 (ENSCHIG00000027192) DHRS7 (ENSCHIG00000026336) ENSCHIG00000006564 ENSCHIG00000022625 SIX6 (ENSCHIG00000017541) SIX1 (ENSCHIG00000024896) SIX4 (ENSCHIG00000012309) ENSCHIG00000022102 MNAT1 (ENSCHIG00000021930) TRMT5 (ENSCHIG00000018801) SLC38A6 (ENSCHIG00000020159) TMEM30B (ENSCHIG00000009225) PRKCH (ENSCHIG00000016844) ENSCHIG00000018951 #22 HIF1A (ENSCHIG00000015613) SNAPC1 (ENSCHIG00000011278) SYT16 (ENSCHIG00000021144) ENSCHIG00000006728 KCNH5 (ENSCHIG00000000501) RHOJ (ENSCHIG00000016760) GPHB5 (ENSCHIG00000025724) ENSCHIG00000024045 PPP2R5E (ENSCHIG00000025432) WDR89 (ENSCHIG00000013306) SGPP1 (ENSCHIG00000020626) ENSCHIG00000022808 SYNE2 (ENSCHIG00000017393) ESR2 (ENSCHIG00000011683) ENSCHIG00000026739 Goat MODERN SPECIES 21 HNRNPUL2 (ENSCHIG00000020213) GNG3 (ENSCHIG00000015824) #7 BSCL2 (ENSCHIG00000026480) #8 LRRN4CL (ENSCHIG00000009031) #9 UBXN1 (ENSCHIG00000006820) #10 UQCC3 (ENSCHIG00000018953) #11 CSKMT (ENSCHIG00000011409) #13 C11orf98 (ENSCHIG00000022514) #14 INTS5 (ENSCHIG00000013982) #15 GANAB (ENSCHIG00000022447) #16 ENSCHIG00000016332 #17 ROM1 (ENSCHIG00000010262) #18 EML3 (ENSCHIG00000021585) #19 MTA2 (ENSCHIG00000015501) #20 TUT1 (ENSCHIG00000006765) #21 ENSCHIG00000022487 #22 AHNAK (ENSCHIG00000015249) #23 ASRGL1 (ENSCHIG00000024873) #24 ENSCHIG00000018172 #25 ENSCHIG00000013354 INCENP (ENSCHIG00000023449) #27 FTH1 (ENSCHIG00000018949) ##28 BEST1 (ENSCHIG00000005599) #29 RAB3IL1 (ENSCHIG00000018161) #30 FADS3 (ENSCHIG00000026956) #31 ENSCHIG00000015460 #32 FADS1 (ENSCHIG00000022314) #33 ENSCHIG00000013437 FEN1 (ENSCHIG00000009155) #34 ENSCHIG00000018241 ##35 MYRF (ENSCHIG00000003036) #36 Cetacea ANCESTRAL SPECIES 4 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00390000009588.nb ENSGT00950000182841.b.a.a.b.b.n.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000167720 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00390000009588.nb ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000167720 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00390000009588.nb ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.a.b ##33 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Dolphin MODERN SPECIES 2428 HNRNPUL2 (ENSTTRG00000002475) GNG3 (ENSTTRG00000002474) #7 ENSTTRG00000002473 #8 LRRN4CL (ENSTTRG00000002472) #9 UBXN1 (ENSTTRG00000002471) #10 UQCC3 (ENSTTRG00000002470) #11 METTL12 (ENSTTRG00000002469) #13 LBHD1 (ENSTTRG00000002468) #12 INTS5 (ENSTTRG00000002467) #15 GANAB (ENSTTRG00000002466) #16 B3GAT3 (ENSTTRG00000002465) #17 ROM1 (ENSTTRG00000002464) #18 EML3 (ENSTTRG00000002463) #19 MTA2 (ENSTTRG00000002461) #20 TUT1 (ENSTTRG00000002460) #21 EEF1G (ENSTTRG00000002459) #22 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000167720 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00390000009588.nb ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000167720 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00390000009588.nb ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Narwhal MODERN SPECIES 314 HNRNPUL2 (ENSMMNG00015019703) GNG3 (ENSMMNG00015019682) #7 BSCL2 (ENSMMNG00015019637) #8 ENSMMNG00015019615 #9 UBXN1 (ENSMMNG00015019592) #10 UQCC3 (ENSMMNG00015019569) #11 CSKMT (ENSMMNG00015019549) #13 LBHD1 (ENSMMNG00015019506) #12 INTS5 (ENSMMNG00015019476) #15 GANAB (ENSMMNG00015019271) #16 B3GAT3 (ENSMMNG00015019182) #17 ROM1 (ENSMMNG00015019160) #18 EML3 (ENSMMNG00015019097) #19 MTA2 (ENSMMNG00015019012) #20 TUT1 (ENSMMNG00015018972) #21 EEF1G (ENSMMNG00015018940) #22 ENSMMNG00015018882 #23 ENSMMNG00015018842 ASRGL1 (ENSMMNG00015018816) #24 INCENP (ENSMMNG00015018796) #27 ENSMMNG00015018773 ENSMMNG00015018730 ##28 BEST1 (ENSMMNG00015018677) #29 RAB3IL1 (ENSMMNG00015018609) #30 FADS3 (ENSMMNG00015018534) #31 FADS2 (ENSMMNG00015018459) #32 FADS1 (ENSMMNG00015018422) #33 ENSMMNG00015018407 FEN1 (ENSMMNG00015018398) #34 ENSMMNG00015018376 #35 MYRF (ENSMMNG00015018267) #36 Beluga whale MODERN SPECIES 7 HNRNPUL2 (ENSDLEG00000018363) GNG3 (ENSDLEG00000018479) #7 BSCL2 (ENSDLEG00000018487) #8 LRRN4CL (ENSDLEG00000018503) #9 UBXN1 (ENSDLEG00000018521) #10 UQCC3 (ENSDLEG00000018687) #11 METTL12 (ENSDLEG00000018693) #13 CUNH11orf98 (ENSDLEG00000018700) #14 INTS5 (ENSDLEG00000018703) #15 GANAB (ENSDLEG00000018708) #16 B3GAT3 (ENSDLEG00000018722) #17 ROM1 (ENSDLEG00000018727) #18 EML3 (ENSDLEG00000018806) #19 MTA2 (ENSDLEG00000019734) #20 TUT1 (ENSDLEG00000019807) #21 EEF1G (ENSDLEG00000019824) #22 ENSDLEG00000019831 ##23 ENSDLEG00000000042 #23 ENSDLEG00000000054 ASRGL1 (ENSDLEG00000000069) #24 INCENP (ENSDLEG00000000094) #27 ENSDLEG00000000149 FTH1 (ENSDLEG00000000166) ##28 ENSDLEG00000000215 #29 RAB3IL1 (ENSDLEG00000000259) #30 FADS3 (ENSDLEG00000000318) #31 FADS2 (ENSDLEG00000000450) #32 ENSDLEG00000000465 ##33 ENSDLEG00000000478 FEN1 (ENSDLEG00000000484) #34 ENSDLEG00000000496 #35 Vaquita MODERN SPECIES 19 HNRNPUL2 (ENSPSNG00000019048) GNG3 (ENSPSNG00000019000) #7 BSCL2 (ENSPSNG00000018928) #8 LRRN4CL (ENSPSNG00000018896) #9 UBXN1 (ENSPSNG00000018815) #10 ENSPSNG00000018693 #11 CSKMT (ENSPSNG00000018651) #13 LBHD1 (ENSPSNG00000018488) #12 INTS5 (ENSPSNG00000018449) #15 GANAB (ENSPSNG00000018146) #16 B3GAT3 (ENSPSNG00000018034) #17 ROM1 (ENSPSNG00000017989) #18 EML3 (ENSPSNG00000017777) #19 MTA2 (ENSPSNG00000017617) #20 TUT1 (ENSPSNG00000017538) #21 EEF1G (ENSPSNG00000017454) #22 ENSPSNG00000017355 ##23 ENSPSNG00000017310 ASRGL1 (ENSPSNG00000017251) #24 INCENP (ENSPSNG00000017213) #27 ENSPSNG00000017157 ENSPSNG00000017070 #29 RAB3IL1 (ENSPSNG00000016838) #30 FADS3 (ENSPSNG00000016702) #31 FADS2 (ENSPSNG00000016437) #32 FADS1 (ENSPSNG00000016302) #33 ENSPSNG00000016241 FEN1 (ENSPSNG00000016213) #34 TMEM258 (ENSPSNG00000016151) #35 MYRF (ENSPSNG00000015696) #36 DAGLA (ENSPSNG00000015388) #37 Sperm whale MODERN SPECIES 41 HNRNPUL2 (ENSPCTG00005016628) GNG3 (ENSPCTG00005016574) #7 BSCL2 (ENSPCTG00005016458) #8 LRRN4CL (ENSPCTG00005016435) #9 UBXN1 (ENSPCTG00005016314) #10 UQCC3 (ENSPCTG00005016275) #11 CSKMT (ENSPCTG00005016237) #13 CUNH11orf98 (ENSPCTG00005016037) #12 INTS5 (ENSPCTG00005016002) #15 GANAB (ENSPCTG00005015548) #16 B3GAT3 (ENSPCTG00005015447) #17 ROM1 (ENSPCTG00005015418) #18 EML3 (ENSPCTG00005014675) #19 MTA2 (ENSPCTG00005014433) #20 TUT1 (ENSPCTG00005014312) #21 EEF1G (ENSPCTG00005014278) #22 ENSPCTG00005014260 ##23 Blue whale DUPLICATION Blue whale MODERN SPECIES 19 HNRNPUL2 (ENSBMSG00010008413) GNG3 (ENSBMSG00010008393) #7 BSCL2 (ENSBMSG00010008336) #8 LRRN4CL (ENSBMSG00010008324) #9 UBXN1 (ENSBMSG00010008293) #10 UQCC3 (ENSBMSG00010008263) #11 CSKMT (ENSBMSG00010008233) #13 LBHD1 (ENSBMSG00010008202) #12 INTS5 (ENSBMSG00010008179) #15 GANAB (ENSBMSG00010008146) #16 B3GAT3 (ENSBMSG00010008115) #17 ROM1 (ENSBMSG00010008104) #18 EML3 (ENSBMSG00010008039) #19 MTA2 (ENSBMSG00010007990) #20 TUT1 (ENSBMSG00010007969) #21 EEF1G (ENSBMSG00010007952) #22 AHNAK (ENSBMSG00010007921) #23 SCGB1A1 (ENSBMSG00010007899) ASRGL1 (ENSBMSG00010007885) #24 ENSBMSG00010007872 #25 ENSBMSG00010007862 ENSBMSG00010007851 INCENP (ENSBMSG00010007722) #27 ENSBMSG00010007674 ENSBMSG00010007637 #28 BEST1 (ENSBMSG00010007587) #29 RAB3IL1 (ENSBMSG00010007458) #30 ENSBMSG00010007377 #31 FADS2 (ENSBMSG00010007330) #32 FADS1 (ENSBMSG00010007282) #33 ENSBMSG00010007270 Blue whale MODERN SPECIES 40 MSN (ENSBMSG00010016394) VSIG4 (ENSBMSG00010016469) HEPH (ENSBMSG00010016714) ENSBMSG00010017291 ENSBMSG00010017314 EDA2R (ENSBMSG00010017338) AR (ENSBMSG00010017403) ENSBMSG00010017616 YIPF6 (ENSBMSG00010017661) STARD8 (ENSBMSG00010017725) EFNB1 (ENSBMSG00010017761) PJA1 (ENSBMSG00010017812) NALF2 (ENSBMSG00010017839) EDA (ENSBMSG00010017861) AWAT2 (ENSBMSG00010017987) ENSBMSG00010018011 #22 OTUD6A (ENSBMSG00010018026) DGAT2L6 (ENSBMSG00010018039) P2RY4 (ENSBMSG00010018084) ARR3 (ENSBMSG00010018119) PDZD11 (ENSBMSG00010018341) KIF4A (ENSBMSG00010018369) GDPD2 (ENSBMSG00010018409) DLG3 (ENSBMSG00010018530) ENSBMSG00010019038 SLC7A3 (ENSBMSG00010019048) ENSBMSG00010019077 SNX12 (ENSBMSG00010019093) FOXO4 (ENSBMSG00010019131) ENSBMSG00010019173 IL2RG (ENSBMSG00010019221) Suina ANCESTRAL SPECIES 14 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.a.c.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Chacoan peccary MODERN SPECIES 920 HNRNPUL2 (ENSCWAG00000018533) BSCL2 (ENSCWAG00000018615) #8 GNG3 (ENSCWAG00000018653) #7 LRRN4CL (ENSCWAG00000018681) #9 UBXN1 (ENSCWAG00000018701) #10 UQCC3 (ENSCWAG00000018794) #11 CSKMT (ENSCWAG00000018813) #13 C11orf98 (ENSCWAG00000018837) #14 INTS5 (ENSCWAG00000018861) #15 GANAB (ENSCWAG00000018894) #16 B3GAT3 (ENSCWAG00000019113) #17 ROM1 (ENSCWAG00000019159) #18 EML3 (ENSCWAG00000019185) #19 MTA2 (ENSCWAG00000019233) #20 TUT1 (ENSCWAG00000019273) #21 EEF1G (ENSCWAG00000019299) #22 ENSCWAG00000019329 ##23 ENSCWAG00000019398 #23 SCGB1A1 (ENSCWAG00000019506) ASRGL1 (ENSCWAG00000019530) #24 ENSCWAG00000019557 #25 ENSCWAG00000019575 ##28 BEST1 (ENSCWAG00000019634) #29 RAB3IL1 (ENSCWAG00000019675) #30 FADS3 (ENSCWAG00000019817) #31 FADS2 (ENSCWAG00000019902) #32 ENSCWAG00000019984 #33 ENSCWAG00000020002 FEN1 (ENSCWAG00000020017) #34 ENSCWAG00000020024 #35 MYRF (ENSCWAG00000004266) #36 Pig DUPLICATION Pig MODERN SPECIES 10 TTC9C (ENSSSCG00000035472) HNRNPUL2 (ENSSSCG00000028542) BSCL2 (ENSSSCG00000020823) #8 ENSSSCG00000032197 #7 UBXN1 (ENSSSCG00000023110) #10 UQCC3 (ENSSSCG00000038370) #11 CSKMT (ENSSSCG00000027847) #13 C11orf98 (ENSSSCG00000058339) #14 INTS5 (ENSSSCG00000028275) #15 GANAB (ENSSSCG00000030653) #16 B3GAT3 (ENSSSCG00000020809) #17 ROM1 (ENSSSCG00000033054) #18 EML3 (ENSSSCG00000013061) #19 MTA2 (ENSSSCG00000013062) #20 TUT1 (ENSSSCG00000013063) #21 ENSSSCG00000013064 #22 ENSSSCG00000036669 ##23 ENSSSCG00000033010 #23 ENSSSCG00000055375 #23 SCGB1A1 (ENSSSCG00000013060) ASRGL1 (ENSSSCG00000013065) #24 PHEROC (ENSSSCG00000013067) #25 SCGB1D1 (ENSSSCG00000013068) INCENP (ENSSSCG00000013066) #27 ENSSSCG00000014540 ##28 BEST1 (ENSSSCG00000023090) #29 RAB3IL1 (ENSSSCG00000013074) #30 FADS3 (ENSSSCG00000013073) #31 FADS2 (ENSSSCG00000013072) #32 FADS1 (ENSSSCG00000024015) #33 FEN1 (ENSSSCG00000063433) #34 Pig MODERN SPECIES CALHM4 (ENSSSCG00000004445) ENSSSCG00000004446 ENSSSCG00000025656 ENSSSCG00000023415 ENSSSCG00000043963 ENSSSCG00000040797 LGSN (ENSSSCG00000004450) RIPPLY2 (ENSSSCG00000062898) SNAP91 (ENSSSCG00000004453) PRSS35 (ENSSSCG00000004452) ME1 (ENSSSCG00000004454) RWDD2A (ENSSSCG00000029129) PGM3 (ENSSSCG00000004456) DOP1A (ENSSSCG00000004457) UBE3D (ENSSSCG00000026346) ENSSSCG00000053568 #22 TPBG (ENSSSCG00000004458) ENSSSCG00000032485 IBTK (ENSSSCG00000004460) ENSSSCG00000031482 TENT5A (ENSSSCG00000004464) ENSSSCG00000046535 BCKDHB (ENSSSCG00000004465) TTK (ENSSSCG00000004466) ELOVL4 (ENSSSCG00000028080) SH3BGRL2 (ENSSSCG00000032015) LCA5 (ENSSSCG00000004469) ENSSSCG00000046076 HMGN3 (ENSSSCG00000004470) PHIP (ENSSSCG00000004473) ENSSSCG00000049571 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Carnivora ANCESTRAL SPECIES 7 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT01100000263497.B.c.a #7 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Felidae ANCESTRAL SPECIES ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Panthera ANCESTRAL SPECIES 18 ENSGT00940000160376 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000167720 ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650.a.a #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Panthera_a ANCESTRAL SPECIES 18 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000167720 ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650.a.a #29 ENSGT00940000158650.b #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 leopard MODERN SPECIES 64 TTC9C (ENSPPRG00000005993) HNRNPUL2 (ENSPPRG00000006380) ENSPPRG00000006909 #7 BSCL2 (ENSPPRG00000008935) #8 LRRN4CL (ENSPPRG00000015844) #9 UBXN1 (ENSPPRG00000010233) #10 UQCC3 (ENSPPRG00000010596) #11 C11orf98 (ENSPPRG00000010833) #14 INTS5 (ENSPPRG00000011031) #15 GANAB (ENSPPRG00000013482) #16 B3GAT3 (ENSPPRG00000013948) #17 ROM1 (ENSPPRG00000014079) #18 EML3 (ENSPPRG00000023815) #19 MTA2 (ENSPPRG00000022897) #20 TUT1 (ENSPPRG00000000257) #21 EEF1G (ENSPPRG00000000804) #22 ENSPPRG00000001160 #23 ENSPPRG00000001704 ASRGL1 (ENSPPRG00000002052) #24 ENSPPRG00000002262 #25 INCENP (ENSPPRG00000006209) #27 ENSPPRG00000006764 #28 ENSPPRG00000007445 #29 ENSPPRG00000007627 #29 RAB3IL1 (ENSPPRG00000008696) #30 FADS3 (ENSPPRG00000009918) #31 FADS2 (ENSPPRG00000011694) #32 FADS1 (ENSPPRG00000012671) #33 ENSPPRG00000012890 FEN1 (ENSPPRG00000016819) #34 ENSPPRG00000013362 #35 lion MODERN SPECIES 10 HNRNPUL2 (ENSPLOG00000007617) ENSPLOG00000007595 #7 BSCL2 (ENSPLOG00000007556) #8 LRRN4CL (ENSPLOG00000009871) #9 UBXN1 (ENSPLOG00000009769) #10 UQCC3 (ENSPLOG00000009743) #11 CSKMT (ENSPLOG00000009731) #13 LBHD1 (ENSPLOG00000009643) #12 INTS5 (ENSPLOG00000009619) #15 GANAB (ENSPLOG00000009125) #16 B3GAT3 (ENSPLOG00000008977) #17 ROM1 (ENSPLOG00000008948) #18 EML3 (ENSPLOG00000008783) #19 MTA2 (ENSPLOG00000008641) #20 TUT1 (ENSPLOG00000008550) #21 EEF1G (ENSPLOG00000008495) #22 ENSPLOG00000008461 #23 ENSPLOG00000008404 ##23 ENSPLOG00000008372 ASRGL1 (ENSPLOG00000008346) #24 ENSPLOG00000008312 #25 ENSPLOG00000008289 ENSPLOG00000008201 INCENP (ENSPLOG00000008155) #27 ENSPLOG00000008095 #28 BEST1 (ENSPLOG00000007969) #29 RAB3IL1 (ENSPLOG00000007741) #30 FADS3 (ENSPLOG00000007672) #31 FADS2 (ENSPLOG00000007565) #32 FADS1 (ENSPLOG00000007444) #33 ENSPLOG00000007425 Tiger MODERN SPECIES 369 HNRNPUL2 (ENSPTIG00000017670) ENSPTIG00000019130 #7 BSCL2 (ENSPTIG00000019239) #8 LRRN4CL (ENSPTIG00000000217) #9 UBXN1 (ENSPTIG00000008345) #10 UQCC3 (ENSPTIG00000012993) #11 CSKMT (ENSPTIG00000013521) #13 C11orf98 (ENSPTIG00000013699) #14 INTS5 (ENSPTIG00000014269) #15 GANAB (ENSPTIG00000014913) #16 B3GAT3 (ENSPTIG00000017991) #17 ROM1 (ENSPTIG00000019100) #18 EML3 (ENSPTIG00000019503) #19 MTA2 (ENSPTIG00000013509) #20 TUT1 (ENSPTIG00000017573) #21 EEF1G (ENSPTIG00000018752) #22 ENSPTIG00000019468 ##23 ENSPTIG00000002472 ASRGL1 (ENSPTIG00000005323) #24 ENSPTIG00000006814 #25 ENSPTIG00000011535 #28 ENSPTIG00000012608 #29 RAB3IL1 (ENSPTIG00000012918) #30 FADS3 (ENSPTIG00000014191) #31 FADS2 (ENSPTIG00000015140) #32 FADS1 (ENSPTIG00000017932) #33 ENSPTIG00000019542 FEN1 (ENSPTIG00000001610) #34 TMEM258 (ENSPTIG00000020759) #35 ENSPTIG00000000743 #36 DAGLA (ENSPTIG00000006114) #37 Cat MODERN SPECIES 241 HNRNPUL2 (ENSFCAG00000014766) ENSFCAG00000035265 #7 BSCL2 (ENSFCAG00000018428) #8 LRRN4CL (ENSFCAG00000044682) #9 UBXN1 (ENSFCAG00000008866) #10 UQCC3 (ENSFCAG00000026508) #11 CSKMT (ENSFCAG00000019062) #13 LBHD1 (ENSFCAG00000038803) #12 INTS5 (ENSFCAG00000022488) #15 GANAB (ENSFCAG00000008865) #16 B3GAT3 (ENSFCAG00000008864) #17 ROM1 (ENSFCAG00000008863) #18 EML3 (ENSFCAG00000008862) #19 MTA2 (ENSFCAG00000008861) #20 TUT1 (ENSFCAG00000008859) #21 EEF1G (ENSFCAG00000008858) #22 ENSFCAG00000047570 #23 ENSFCAG00000045898 #23 ENSFCAG00000050660 ##23 SCGB1A1 (ENSFCAG00000008856) ASRGL1 (ENSFCAG00000008855) #24 ENSFCAG00000024754 #25 ENSFCAG00000034757 INCENP (ENSFCAG00000002264) #27 FTH1 (ENSFCAG00000007382) #28 BEST1 (ENSFCAG00000050693) #29 RAB3IL1 (ENSFCAG00000007376) #30 FADS3 (ENSFCAG00000027535) #31 FADS2 (ENSFCAG00000024030) #32 FADS1 (ENSFCAG00000013686) #33 ENSFCAG00000035555 Caniformia ANCESTRAL SPECIES 21 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT01100000263497.B.c.a #7 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.i ENSGT00390000013802 #25 ENSGT00530000063866.j.b ENSGT00530000063866.j.a ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Canidae ANCESTRAL SPECIES 13 ENSGT00940000160376 ENSGT01100000263497.B.c.a #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.j.b ENSGT00390000013802 #25 ENSGT00530000063866.j.a ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00520000061410 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00940000160376 ENSGT01100000263497.B.c.a #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.j.b ENSGT00390000013802.m #25 ENSGT00530000063866.j.a ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00520000061410 Dog DUPLICATION Dog MODERN SPECIES 35 LPIN2 (ENSCAFG00845002673) MYOM1 (ENSCAFG00845002811) ENSCAFG00845002989 MYL12B (ENSCAFG00845003004) ENSCAFG00845003014 TGIF1 (ENSCAFG00845003025) DLGAP1 (ENSCAFG00845003202) AKAIN1 (ENSCAFG00845003415) ZBTB14 (ENSCAFG00845003431) EPB41L3 (ENSCAFG00845003573) TMEM200C (ENSCAFG00845003836) L3MBTL4 (ENSCAFG00845003867) ARHGAP28 (ENSCAFG00845003916) ENSCAFG00845003930 LAMA1 (ENSCAFG00845004002) ENSCAFG00845004087 #22 LRRC30 (ENSCAFG00845004098) PTPRM (ENSCAFG00845004181) RAB12 (ENSCAFG00845004291) MTCL1 (ENSCAFG00845004330) ENSCAFG00845004451 NDUFV2 (ENSCAFG00845004461) ANKRD12 (ENSCAFG00845004481) ENSCAFG00845004503 TWSG1 (ENSCAFG00845004527) RALBP1 (ENSCAFG00845004603) PPP4R1 (ENSCAFG00845004616) RAB31 (ENSCAFG00845004662) ENSCAFG00845004677 VAPA (ENSCAFG00845004692) APCDD1 (ENSCAFG00845004706) Dog MODERN SPECIES 23 ENSCAFG00845017912 ENSCAFG00845017948 ENSCAFG00845017973 OR4G11 (ENSCAFG00845018028) ENSCAFG00845018053 OR4K5 (ENSCAFG00845018076) ENSCAFG00845018110 OR4G8 (ENSCAFG00845018136) ENSCAFG00845018170 OR4G18 (ENSCAFG00845018208) OR4G10 (ENSCAFG00845018230) OR4N5 (ENSCAFG00845018249) OR4Q2 (ENSCAFG00845018324) OR4F63 (ENSCAFG00845018343) ENSCAFG00845018362 ENSCAFG00845018397 #22 ENSCAFG00845018434 ENSCAFG00845018553 NUTM1 (ENSCAFG00845018623) ENSCAFG00845018738 ENSCAFG00845018772 SLC12A6 (ENSCAFG00845019004) EMC4 (ENSCAFG00845019980) ENSCAFG00845020042 KATNBL1 (ENSCAFG00845020083) EMC7 (ENSCAFG00845020226) CHRM5 (ENSCAFG00845020291) ENSCAFG00845020339 RYR3 (ENSCAFG00845025226) TMCO5B (ENSCAFG00845031108) FMN1 (ENSCAFG00845031109) Dog MODERN SPECIES 3 ENSCAFG00845027377 SNRPC (ENSCAFG00845027420) BLTP3A (ENSCAFG00845027489) FKBP1A (ENSCAFG00845027743) TAF11 (ENSCAFG00845027786) ANKS1A (ENSCAFG00845027911) TCP11 (ENSCAFG00845028305) SCUBE3 (ENSCAFG00845028551) ZNF76 (ENSCAFG00845028752) DEF6 (ENSCAFG00845028897) PPARD (ENSCAFG00845028955) FANCE (ENSCAFG00845006312) RPL10A (ENSCAFG00845006364) TEAD3 (ENSCAFG00845006407) TULP1 (ENSCAFG00845006584) ENSCAFG00845006823 #22 ENSCAFG00845006865 ENSCAFG00845006891 ARMC12 (ENSCAFG00845006948) CLPSL2 (ENSCAFG00845006989) CLPS (ENSCAFG00845007025) LHFPL5 (ENSCAFG00845007108) SRPK1 (ENSCAFG00845007276) SLC26A8 (ENSCAFG00845007666) MAPK14 (ENSCAFG00845008249) MAPK14 (ENSCAFG00845008508) BRPF3 (ENSCAFG00845008645) PNPLA1 (ENSCAFG00845008874) BNIP5 (ENSCAFG00845008912) ETV7 (ENSCAFG00845009107) PXT1 (ENSCAFG00845009357) Dingo DUPLICATION Dingo MODERN SPECIES 271 MYL12B (ENSCAFG00020020908) ENSCAFG00020020914 TGIF1 (ENSCAFG00020020919) DLGAP1 (ENSCAFG00020020947) ENSCAFG00020021056 ENSCAFG00020021066 ZBTB14 (ENSCAFG00020021068) ENSCAFG00020021069 EPB41L3 (ENSCAFG00020021170) L3MBTL4 (ENSCAFG00020022524) ENSCAFG00020022527 ENSCAFG00020022528 ENSCAFG00020022530 ENSCAFG00020022531 ENSCAFG00020022535 ENSCAFG00020022536 #22 LRRC30 (ENSCAFG00020022537) PTPRM (ENSCAFG00020022563) RAB12 (ENSCAFG00020023721) MTCL1 (ENSCAFG00020023727) NDUFV2 (ENSCAFG00020023766) ENSCAFG00020023769 ENSCAFG00020023774 TWSG1 (ENSCAFG00020023775) ENSCAFG00020023779 RALBP1 (ENSCAFG00020023780) PPP4R1 (ENSCAFG00020023782) ENSCAFG00020023785 ENSCAFG00020023786 ENSCAFG00020023787 ENSCAFG00020023790 Dingo MODERN SPECIES 36 HNRNPUL2 (ENSCAFG00020013120) GNG3 (ENSCAFG00020013115) #7 BSCL2 (ENSCAFG00020013107) #8 LRRN4CL (ENSCAFG00020013104) #9 UBXN1 (ENSCAFG00020013102) #10 UQCC3 (ENSCAFG00020013100) #11 CSKMT (ENSCAFG00020013099) #13 C11orf98 (ENSCAFG00020013094) #14 INTS5 (ENSCAFG00020013093) #15 GANAB (ENSCAFG00020013079) #16 B3GAT3 (ENSCAFG00020013076) #17 ROM1 (ENSCAFG00020013070) #18 EML3 (ENSCAFG00020013050) #19 MTA2 (ENSCAFG00020013043) #20 TUT1 (ENSCAFG00020013039) #21 EEF1G (ENSCAFG00020013031) #22 ENSCAFG00020013019 ##23 ENSCAFG00020013011 ASRGL1 (ENSCAFG00020013005) #24 ENSCAFG00020012998 ENSCAFG00020012996 #25 ENSCAFG00020012994 #25 ENSCAFG00020012987 INCENP (ENSCAFG00020012970) #27 ENSCAFG00020012965 #28 BEST1 (ENSCAFG00020012953) #29 RAB3IL1 (ENSCAFG00020012943) #30 FADS3 (ENSCAFG00020012916) #31 FADS2 (ENSCAFG00020012907) #32 FADS1 (ENSCAFG00020012860) #33 ENSCAFG00020012857 Dingo MODERN SPECIES 205 ENSCAFG00020009722 OR4K15 (ENSCAFG00020009719) ENSCAFG00020009715 ENSCAFG00020009703 ENSCAFG00020009696 ENSCAFG00020009692 ENSCAFG00020009691 ENSCAFG00020009666 ENSCAFG00020009664 ENSCAFG00020009662 ENSCAFG00020009660 ENSCAFG00020009659 ENSCAFG00020009656 OR4N5 (ENSCAFG00020009655) ENSCAFG00020009636 ENSCAFG00020009632 #22 ENSCAFG00020009629 LPCAT4 (ENSCAFG00020009624) ENSCAFG00020009622 NOP10 (ENSCAFG00020009619) ENSCAFG00020009616 ENSCAFG00020009615 ENSCAFG00020009574 ENSCAFG00020009569 EMC4 (ENSCAFG00020009567) KATNBL1 (ENSCAFG00020009542) EMC7 (ENSCAFG00020009540) CHRM5 (ENSCAFG00020009539) AVEN (ENSCAFG00020009528) ENSCAFG00020009515 RYR3 (ENSCAFG00020008970) Red fox DUPLICATION Red fox DUPLICATION Red fox MODERN SPECIES 49 TTC9C (ENSVVUG00000029845) HNRNPUL2 (ENSVVUG00000029847) GNG3 (ENSVVUG00000029850) #7 BSCL2 (ENSVVUG00000029852) #8 ENSVVUG00000029854 #9 UBXN1 (ENSVVUG00000029856) #10 UQCC3 (ENSVVUG00000029857) #11 CSKMT (ENSVVUG00000029858) #13 INTS5 (ENSVVUG00000029860) #15 GANAB (ENSVVUG00000029861) #16 B3GAT3 (ENSVVUG00000029862) #17 ROM1 (ENSVVUG00000029863) #18 EML3 (ENSVVUG00000029864) #19 MTA2 (ENSVVUG00000029872) #20 TUT1 (ENSVVUG00000029882) #21 EEF1G (ENSVVUG00000029883) #22 AHNAK (ENSVVUG00000029889) #23 SCGB1A1 (ENSVVUG00000029891) ASRGL1 (ENSVVUG00000029892) #24 ENSVVUG00000029894 ENSVVUG00000029895 #25 Red fox MODERN SPECIES 40 FAM184A (ENSVVUG00000015630) MAN1A1 (ENSVVUG00000014582) TBC1D32 (ENSVVUG00000014396) GJA1 (ENSVVUG00000014389) ENSVVUG00000014381 ENSVVUG00000014369 ENSVVUG00000014365 SPTLC3 (ENSVVUG00000014355) ISM1 (ENSVVUG00000014349) TASP1 (ENSVVUG00000014321) ##24 ESF1 (ENSVVUG00000014318) NDUFAF5 (ENSVVUG00000014314) ENSVVUG00000014312 SEL1L2 (ENSVVUG00000014288) ENSVVUG00000014282 ENSVVUG00000014270 #22 FLRT3 (ENSVVUG00000014266) ENSVVUG00000014232 KIF16B (ENSVVUG00000014146) SNRPB2 (ENSVVUG00000014114) OTOR (ENSVVUG00000014110) ENSVVUG00000014108 PCSK2 (ENSVVUG00000014102) BFSP1 (ENSVVUG00000014097) ENSVVUG00000014095 DSTN (ENSVVUG00000014088) RRBP1 (ENSVVUG00000013194) BANF2 (ENSVVUG00000013129) SNX5 (ENSVVUG00000013100) MGME1 (ENSVVUG00000013096) OVOL2 (ENSVVUG00000013094) Red fox MODERN SPECIES 28 ACTC1 (ENSVVUG00000026308) ENSVVUG00000026309 AQR (ENSVVUG00000026312) ZNF770 (ENSVVUG00000026316) DPH6 (ENSVVUG00000026321) ENSVVUG00000026323 CUNH15orf41 (ENSVVUG00000026338) MEIS2 (ENSVVUG00000026356) TMCO5A (ENSVVUG00000026376) SPRED1 (ENSVVUG00000026378) FAM98B (ENSVVUG00000026383) RASGRP1 (ENSVVUG00000026388) THBS1 (ENSVVUG00000026406) FSIP1 (ENSVVUG00000026413) GPR176 (ENSVVUG00000026415) ENSVVUG00000026419 #22 ENSVVUG00000026423 ENSVVUG00000026425 EIF2AK4 (ENSVVUG00000026429) ENSVVUG00000026442 BMF (ENSVVUG00000026444) BUB1B (ENSVVUG00000026450) PAK6 (ENSVVUG00000026462) ANKRD63 (ENSVVUG00000026463) PLCB2 (ENSVVUG00000026474) CCDC9B (ENSVVUG00000026575) DISP2 (ENSVVUG00000026578) KNSTRN (ENSVVUG00000026580) IVD (ENSVVUG00000026582) BAHD1 (ENSVVUG00000026583) CCDC32 (ENSVVUG00000026588) Red fox MODERN SPECIES 55 SMCHD1 (ENSVVUG00000007320) EMILIN2 (ENSVVUG00000008678) LPIN2 (ENSVVUG00000008689) MYOM1 (ENSVVUG00000008791) ENSVVUG00000009225 MYL12B (ENSVVUG00000009238) TGIF1 (ENSVVUG00000009272) DLGAP1 (ENSVVUG00000009317) ZBTB14 (ENSVVUG00000010107) EPB41L3 (ENSVVUG00000010125) ENSVVUG00000010208 L3MBTL4 (ENSVVUG00000010230) ARHGAP28 (ENSVVUG00000010346) ENSVVUG00000010487 LAMA1 (ENSVVUG00000010548) ENSVVUG00000011552 #22 LRRC30 (ENSVVUG00000011556) PTPRM (ENSVVUG00000011599) RAB12 (ENSVVUG00000011748) MTCL1 (ENSVVUG00000011763) NDUFV2 (ENSVVUG00000011795) ANKRD12 (ENSVVUG00000011805) ENSVVUG00000011816 TWSG1 (ENSVVUG00000011819) RALBP1 (ENSVVUG00000011826) ENSVVUG00000011839 PPP4R1 (ENSVVUG00000011841) RAB31 (ENSVVUG00000011854) ENSVVUG00000011863 VAPA (ENSVVUG00000011865) APCDD1 (ENSVVUG00000011874) Caniformia_b ANCESTRAL SPECIES 19 ENSGT00940000160376 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.i ENSGT00390000013802.k #25 ENSGT00530000063866.j.b ENSGT00390000013802.l #25 ENSGT00530000063866.j.a ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.d #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 Mustelinae ANCESTRAL SPECIES 3 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.i ENSGT00390000013802.k #25 ENSGT00530000063866.j.b ENSGT00390000013802.l #25 ENSGT00530000063866.j.a ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.d #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 American mink MODERN SPECIES 215 TTC9C (ENSNVIG00000020741) HNRNPUL2 (ENSNVIG00000020754) BSCL2 (ENSNVIG00000020778) #8 GBG3 (ENSNVIG00000020795) #7 LRRN4CL (ENSNVIG00000020803) #9 UBXN1 (ENSNVIG00000020815) #10 UQCC3 (ENSNVIG00000020874) #11 MTL12 (ENSNVIG00000020886) #13 INTS5 (ENSNVIG00000020902) #15 GANAB (ENSNVIG00000020917) #16 B3GAT3 (ENSNVIG00000020996) #17 ROM1 (ENSNVIG00000021007) #18 EML3 (ENSNVIG00000021014) #19 MTA2 (ENSNVIG00000021082) #20 TUT1 (ENSNVIG00000021132) #21 EEF1G (ENSNVIG00000021149) #22 ENSNVIG00000021179 ##23 ENSNVIG00000021198 #23 SCGB1A1 (ENSNVIG00000021208) ASRGL1 (ENSNVIG00000021214) #24 ENSNVIG00000021239 ENSNVIG00000021243 #25 ENSNVIG00000021252 ENSNVIG00000021260 ENSNVIG00000021274 INCENP (ENSNVIG00000021280) #27 ENSNVIG00000021327 #28 BEST1 (ENSNVIG00000021351) #29 R3GEF (ENSNVIG00000021368) #30 FADS3 (ENSNVIG00000021398) #31 FADS2 (ENSNVIG00000021440) #32 Ferret MODERN SPECIES 314 ZBTB3 (ENSMPUG00000013694) TTC9C (ENSMPUG00000013698) HNRNPUL2 (ENSMPUG00000013707) GNG3 (ENSMPUG00000013710) #7 BSCL2 (ENSMPUG00000013712) #8 UBXN1 (ENSMPUG00000013715) #10 LBHD1 (ENSMPUG00000013735) #12 CSKMT (ENSMPUG00000013738) #13 INTS5 (ENSMPUG00000013741) #15 GANAB (ENSMPUG00000013744) #16 ROM1 (ENSMPUG00000013858) #18 B3GAT3 (ENSMPUG00000013860) #17 EML3 (ENSMPUG00000013879) #19 MTA2 (ENSMPUG00000013883) #20 TUT1 (ENSMPUG00000013938) #21 EEF1G (ENSMPUG00000013942) #22 ENSMPUG00000013984 #23 SCGB1A1 (ENSMPUG00000013992) ASRGL1 (ENSMPUG00000013995) #24 ENSMPUG00000013998 ENSMPUG00000014001 #25 ENSMPUG00000014005 ENSMPUG00000014008 #25 ENSMPUG00000014011 INCENP (ENSMPUG00000014015) #27 ENSMPUG00000014017 ENSMPUG00000014030 #28 BEST1 (ENSMPUG00000014068) #29 RAB3IL1 (ENSMPUG00000014075) #30 FADS3 (ENSMPUG00000014102) #31 FADS2 (ENSMPUG00000014108) #32 Ursidae ANCESTRAL SPECIES 2 ENSGT00940000160376 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457.cb #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.i ENSGT00390000013802.k #25 ENSGT00530000063866.j.b ENSGT00390000013802.l #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.d #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Ursus ANCESTRAL SPECIES 63 ENSGT00940000160376 ENSGT01100000263497.B.c.b #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457.cb #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866.i ENSGT00390000013802.k #25 ENSGT00530000063866.j.b ENSGT00390000013802.l #25 ENSGT00950000182841.b.a.a.b.b.c.a #28 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.d #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 American black bear MODERN SPECIES 1548 HNRNPUL2 (ENSUAMG00000025971) BSCL2 (ENSUAMG00000025972) #8 GNG3 (ENSUAMG00000025973) #7 LRRN4CL (ENSUAMG00000025974) #9 UBXN1 (ENSUAMG00000025975) #10 UQCC3 (ENSUAMG00000025976) #11 CSKMT (ENSUAMG00000025977) #13 C11orf98 (ENSUAMG00000025979) #14 INTS5 (ENSUAMG00000025981) #15 GANAB (ENSUAMG00000026042) #16 B3GAT3 (ENSUAMG00000027142) #17 ROM1 (ENSUAMG00000027144) #18 EML3 (ENSUAMG00000027153) #19 MTA2 (ENSUAMG00000027236) #20 TUT1 (ENSUAMG00000027237) #21 EEF1G (ENSUAMG00000027238) #22 ENSUAMG00000027239 #23 ENSUAMG00000027240 ASRGL1 (ENSUAMG00000027241) #24 Polar bear MODERN SPECIES 303 GNG3 (ENSUMAG00000014458) #7 BSCL2 (ENSUMAG00000014444) #8 LRRN4CL (ENSUMAG00000014439) #9 UBXN1 (ENSUMAG00000014411) #10 UQCC3 (ENSUMAG00000014404) #11 CSKMT (ENSUMAG00000014401) #13 C11orf98 (ENSUMAG00000014389) #14 INTS5 (ENSUMAG00000014386) #15 ENSUMAG00000014377 #16 ENSUMAG00000014362 #16 B3GAT3 (ENSUMAG00000014361) #17 ROM1 (ENSUMAG00000014360) #18 EML3 (ENSUMAG00000014237) #19 MTA2 (ENSUMAG00000012887) #20 TUT1 (ENSUMAG00000012710) #21 EEF1G (ENSUMAG00000012578) #22 ENSUMAG00000012558 #23 ENSUMAG00000012537 ##23 SCGB1A1 (ENSUMAG00000012532) ASRGL1 (ENSUMAG00000012529) #24 ENSUMAG00000012527 ENSUMAG00000012524 #25 ENSUMAG00000012520 ENSUMAG00000012516 #25 ENSUMAG00000012499 #28 BEST1 (ENSUMAG00000012478) #29 ENSUMAG00000012469 #31 ENSUMAG00000012456 #31 FADS2 (ENSUMAG00000012446) #32 FADS1 (ENSUMAG00000012081) #33 ENSUMAG00000012035 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 2046 ENSAMEG00000027000 #22 Giant Panda MODERN SPECIES 537 ENSAMEG00000025917 #22 Giant Panda MODERN SPECIES 2056 ENSAMEG00000025249 #22 Giant Panda MODERN SPECIES 7 HNRNPUL2 (ENSAMEG00000006434) ENSAMEG00000002116 #7 GNG3 (ENSAMEG00000006462) #7 BSCL2 (ENSAMEG00000006466) #8 UBXN1 (ENSAMEG00000006490) #10 UQCC3 (ENSAMEG00000020260) #11 CSKMT (ENSAMEG00000006516) #13 LBHD1 (ENSAMEG00000006512) #12 INTS5 (ENSAMEG00000006517) #15 GANAB (ENSAMEG00000006520) #16 B3GAT3 (ENSAMEG00000006637) #17 ROM1 (ENSAMEG00000006650) #18 EML3 (ENSAMEG00000006659) #19 MTA2 (ENSAMEG00000006678) #20 TUT1 (ENSAMEG00000006723) #21 ENSAMEG00000006745 #22 ENSAMEG00000025702 #23 ENSAMEG00000025259 ##23 ENSAMEG00000006786 ASRGL1 (ENSAMEG00000006791) #24 ENSAMEG00000025507 ENSAMEG00000030118 #25 INCENP (ENSAMEG00000016838) #27 ENSAMEG00000016831 #28 BEST1 (ENSAMEG00000016808) #29 RAB3IL1 (ENSAMEG00000016803) #30 FADS3 (ENSAMEG00000016772) #31 ENSAMEG00000016725 #32 FADS1 (ENSAMEG00000016696) #33 ENSAMEG00000027333 ENSAMEG00000016694 #35 Giant Panda MODERN SPECIES 2031 ENSAMEG00000027247 #22 Laurasiatheria_c ANCESTRAL SPECIES 20 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Equus ANCESTRAL SPECIES 11 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b.b ENSGT00950000183045.A.a.a.g #24 ENSGT00530000063866.k.a.a ENSGT00390000013802.t.a #25 ENSGT00530000063866.k.a.b ENSGT00530000063866.l ENSGT00390000013802.t.b #25 ENSGT00950000183045.A.a.a.h #24 ENSGT00940000155073.b.a.a ENSGT00530000063866.k.b.b ENSGT00390000013802.s.b #25 ENSGT00390000013802.s.a #25 ENSGT00530000063866.k.b.a ENSGT00730000111073 #27 Horse MODERN SPECIES 3 ENSECAG00000050506 HNRNPUL2 (ENSECAG00000020298) GNG3 (ENSECAG00000012185) #7 BSCL2 (ENSECAG00000018657) #8 LRRN4CL (ENSECAG00000005381) #9 UBXN1 (ENSECAG00000017404) #10 UQCC3 (ENSECAG00000017332) #11 LBHD1 (ENSECAG00000040586) #12 CSKMT (ENSECAG00000017322) #13 C11orf98 (ENSECAG00000055466) #14 GANAB (ENSECAG00000014477) #16 B3GAT3 (ENSECAG00000013416) #17 ROM1 (ENSECAG00000013399) #18 MTA2 (ENSECAG00000009847) #19 TUT1 (ENSECAG00000009471) #21 EEF1G (ENSECAG00000014334) #22 AHNAK (ENSECAG00000034383) #23 ENSECAG00000044462 ASRGL1 (ENSECAG00000013093) #24 ENSECAG00000013056 ENSECAG00000039162 ENSECAG00000012203 #25 ENSECAG00000012519 ENSECAG00000059472 ENSECAG00000028903 ENSECAG00000010565 #25 ENSECAG00000037231 #24 ENSECAG00000034235 ENSECAG00000039036 ENSECAG00000010614 ENSECAG00000043238 #25 Donkey MODERN SPECIES 8 HNRNPUL2 (ENSEASG00005011347) GNG3 (ENSEASG00005026313) #7 BSCL2 (ENSEASG00005011244) #8 LRRN4CL (ENSEASG00005025754) #9 UBXN1 (ENSEASG00005011185) #10 UQCC3 (ENSEASG00005034303) #11 CSKMT (ENSEASG00005034678) #13 LBHD1 (ENSEASG00005030712) #12 INTS5 (ENSEASG00005011174) #15 GANAB (ENSEASG00005009472) #16 B3GAT3 (ENSEASG00005009313) #17 ROM1 (ENSEASG00005009310) #18 EML3 (ENSEASG00005009301) #19 MTA2 (ENSEASG00005007551) #20 TUT1 (ENSEASG00005007531) #21 EEF1G (ENSEASG00005007513) #22 ENSEASG00005032006 ENSEASG00005026708 #23 ENSEASG00005030386 #24 ENSEASG00005034855 ENSEASG00005033208 #25 ENSEASG00005004410 ENSEASG00005025058 ENSEASG00005004407 #25 ENSEASG00005007043 #24 ENSEASG00005019637 ENSEASG00005028002 ENSEASG00005009090 ENSEASG00005026123 #25 ENSEASG00005009091 #25 ENSEASG00005036713 Chiroptera ANCESTRAL SPECIES 14 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00730000111073.k #27 ENSGT00530000063866 ENSGT00730000111073.l #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Megabat MODERN SPECIES 2880 HNRNPUL2 (ENSPVAG00000003475) GNG3 (ENSPVAG00000003474) #7 BSCL2 (ENSPVAG00000003473) #8 LRRN4CL (ENSPVAG00000003472) #9 UBXN1 (ENSPVAG00000003470) #10 UQCC3 (ENSPVAG00000003469) #11 CSKMT (ENSPVAG00000003467) #13 LBHD1 (ENSPVAG00000003464) #12 INTS5 (ENSPVAG00000003463) #15 GANAB (ENSPVAG00000003458) #16 B3GAT3 (ENSPVAG00000003456) #17 ROM1 (ENSPVAG00000003455) #18 EML3 (ENSPVAG00000003451) #19 MTA2 (ENSPVAG00000003447) #20 TUT1 (ENSPVAG00000003444) #21 EEF1G (ENSPVAG00000003440) #22 Microchiroptera ANCESTRAL SPECIES 13 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00390000013802 #25 ENSGT00730000111073.l #27 ENSGT00950000182841.b.a.a.b.b #28 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 Microbat MODERN SPECIES 1654 ENSMLUG00000011039 ZBTB3 (ENSMLUG00000011020) TTC9C (ENSMLUG00000010981) HNRNPUL2 (ENSMLUG00000000412) BSCL2 (ENSMLUG00000024511) #8 UQCC3 (ENSMLUG00000024698) #11 UBXN1 (ENSMLUG00000000406) #10 CSKMT (ENSMLUG00000023559) #13 C11orf98 (ENSMLUG00000000396) #14 INTS5 (ENSMLUG00000000391) #15 GANAB (ENSMLUG00000000384) #16 B3GAT3 (ENSMLUG00000000383) #17 EML3 (ENSMLUG00000000365) #19 MTA2 (ENSMLUG00000000357) #20 TUT1 (ENSMLUG00000000349) #21 EEF1G (ENSMLUG00000000342) #22 AHNAK (ENSMLUG00000006351) #23 Greater horseshoe bat MODERN SPECIES 2 HNRNPUL2 (ENSRFEG00010012436) GNG3 (ENSRFEG00010012628) #7 BSCL2 (ENSRFEG00010012669) #8 LRRN4CL (ENSRFEG00010012818) #9 UBXN1 (ENSRFEG00010012842) #10 UQCC3 (ENSRFEG00010012979) #11 CSKMT (ENSRFEG00010013001) #13 C11orf98 (ENSRFEG00010013053) #14 INTS5 (ENSRFEG00010013105) #15 GANAB (ENSRFEG00010013176) #16 B3GAT3 (ENSRFEG00010013706) #17 ROM1 (ENSRFEG00010013764) #18 EML3 (ENSRFEG00010013823) #19 MTA2 (ENSRFEG00010013987) #20 TUT1 (ENSRFEG00010014303) #21 EEF1G (ENSRFEG00010014387) #22 AHNAK (ENSRFEG00010014569) #23 SCGB1A1 (ENSRFEG00010014646) ASRGL1 (ENSRFEG00010014743) #24 ENSRFEG00010014886 #25 ENSRFEG00010014944 #25 ENSRFEG00010015100 #25 INCENP (ENSRFEG00010015121) #27 ENSRFEG00010015154 #28 RAB3IL1 (ENSRFEG00010015301) #30 FADS1 (ENSRFEG00010015439) #33 FADS2 (ENSRFEG00010000561) #32 ENSRFEG00010000627 FEN1 (ENSRFEG00010000639) #34 ENSRFEG00010000644 #35 MYRF (ENSRFEG00010000719) #36 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Canidae ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Canis_lupus ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Dog MODERN SPECIES 5 AOAH (ENSCAFG00845029428) ANLN (ENSCAFG00845029225) MATCAP2 (ENSCAFG00845029090) EEPD1 (ENSCAFG00845029008) SEPTIN7 (ENSCAFG00845028791) ENSCAFG00845028721 HERPUD2 (ENSCAFG00845028689) TBX20 (ENSCAFG00845028609) ENSCAFG00845027391 DPY19L1 (ENSCAFG00845026610) ENSCAFG00845026518 NPSR1 (ENSCAFG00845026238) BMPER (ENSCAFG00845025444) BBS9 (ENSCAFG00845024134) ENSCAFG00845023797 ENSCAFG00845023766 ##22 NT5C3A (ENSCAFG00845023603) FKBP9 (ENSCAFG00845023469) ENSCAFG00845023264 ENSCAFG00845023161 KBTBD2 (ENSCAFG00845023121) AVL9 (ENSCAFG00845022792) LSM5 (ENSCAFG00845022662) PDE1C (ENSCAFG00845022048) PPP1R17 (ENSCAFG00845021714) ITPRID1 (ENSCAFG00845021501) NEUROD6 (ENSCAFG00845021439) ADCYAP1R1 (ENSCAFG00845020886) GHRHR (ENSCAFG00845020695) AQP1 (ENSCAFG00845020628) MINDY4 (ENSCAFG00845020428) Euarchontoglires ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Primates ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00390000007552.e.a ##22 Olive baboon MODERN SPECIES 19 ENSPANG00000044017 RAPGEF3 (ENSPANG00000038998) SLC48A1 (ENSPANG00000015786) ENSPANG00000048474 ENSPANG00000009964 VDR (ENSPANG00000011327) TMEM106C (ENSPANG00000044784) COL2A1 (ENSPANG00000020674) SENP1 (ENSPANG00000010525) ENSPANG00000039475 PFKM (ENSPANG00000019403) ASB8 (ENSPANG00000047762) CCDC184 (ENSPANG00000014422) H1-7 (ENSPANG00000045002) ZNF641 (ENSPANG00000014075) ENSPANG00000041580 ##22 ENSPANG00000041823 C12orf54 (ENSPANG00000008134) OR8S1 (ENSPANG00000006685) OR5BS1P (ENSPANG00000041563) LALBA (ENSPANG00000050965) KANSL2 (ENSPANG00000019844) CCNT1 (ENSPANG00000012633) TEX49 (ENSPANG00000016674) ADCY6 (ENSPANG00000021677) CACNB3 (ENSPANG00000019458) DDX23 (ENSPANG00000019459) RND1 (ENSPANG00000039740) CCDC65 (ENSPANG00000019461) FKBP11 (ENSPANG00000007285) ARF3 (ENSPANG00000025346) Boreoeutheria ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Canidae ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Canis_lupus ANCESTRAL SPECIES ENSGT00390000007552.e.b ##22 Dog MODERN SPECIES 36 EFCAB11 (ENSCAFG00845012677) ENSCAFG00845012543 TTC8 (ENSCAFG00845012241) EML5 (ENSCAFG00845011222) ZC3H14 (ENSCAFG00845010731) PTPN21 (ENSCAFG00845010389) SPATA7 (ENSCAFG00845010144) ENSCAFG00845010059 KCNK10 (ENSCAFG00845009995) GPR65 (ENSCAFG00845009952) ENSCAFG00845009927 GALC (ENSCAFG00845009690) ENSCAFG00845009588 ENSCAFG00845009571 FLRT2 (ENSCAFG00845009503) ENSCAFG00845009457 ##22 ENSCAFG00845009416 ENSCAFG00845009395 SEL1L (ENSCAFG00845009244) STON2 (ENSCAFG00845009165) GTF2A1 (ENSCAFG00845009095) TSHR (ENSCAFG00845008943) CEP128 (ENSCAFG00845008464) DIO2 (ENSCAFG00845008303) ENSCAFG00845008273 NRXN3 (ENSCAFG00845008127) ADCK1 (ENSCAFG00845007904) SNW1 (ENSCAFG00845007783) SLIRP (ENSCAFG00845007701) ALKBH1 (ENSCAFG00845007628) ENSCAFG00845007598 Atlantogenata ANCESTRAL SPECIES 17 ENSGT01100000263497.B #7 ENSGT00390000011639.d #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 #12 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866 ENSGT00390000013802 #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 Xenarthra ANCESTRAL SPECIES ENSGT00390000007552 #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 2798 ENSDNOG00000038701 ENSDNOG00000032734 ENSDNOG00000045368 ENSDNOG00000034081 ENSDNOG00000031798 #22 ENSDNOG00000047920 FAM171A1 (ENSDNOG00000003779) ENSDNOG00000043356 Armadillo MODERN SPECIES 2833 FAM204A (ENSDNOG00000040020) ENSDNOG00000033753 RAB11FIP2 (ENSDNOG00000045786) EMX2 (ENSDNOG00000047293) PDZD8 (ENSDNOG00000043818) SLC18A2 (ENSDNOG00000041849) KCNK18 (ENSDNOG00000005657) ENSDNOG00000039315 ENSDNOG00000041228 AP4E1 (ENSDNOG00000004807) SPPL2A (ENSDNOG00000006171) TRPM7 (ENSDNOG00000012390) USP8 (ENSDNOG00000019714) GABPB1 (ENSDNOG00000044925) ENSDNOG00000030818 ENSDNOG00000046053 #22 HDC (ENSDNOG00000033558) ENSDNOG00000018159 Afrotheria ANCESTRAL SPECIES 9 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639.d #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 Afrotheria_a ANCESTRAL SPECIES 9 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639.d #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b ENSGT00950000183045.A.a.a #24 ENSGT00530000063866 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 Hyrax MODERN SPECIES 1903 TUT1 (ENSPCAG00000002956) #21 EEF1G (ENSPCAG00000002886) #22 ENSPCAG00000002832 #23 Elephant MODERN SPECIES 532 TAF6L (ENSLAFG00000022526) POLR2G (ENSLAFG00000004354) TTC9C (ENSLAFG00000011732) HNRNPUL2 (ENSLAFG00000005377) GNG3 (ENSLAFG00000005381) #7 BSCL2 (ENSLAFG00000030634) #8 UBXN1 (ENSLAFG00000021809) #10 UQCC3 (ENSLAFG00000013152) #11 C11orf98 (ENSLAFG00000013149) #14 INTS5 (ENSLAFG00000005382) #15 GANAB (ENSLAFG00000005386) #16 B3GAT3 (ENSLAFG00000009944) #17 ROM1 (ENSLAFG00000009942) #18 MTA2 (ENSLAFG00000027248) #20 TUT1 (ENSLAFG00000003340) #21 EEF1G (ENSLAFG00000003339) #22 ENSLAFG00000029676 ##23 SCGB1A1 (ENSLAFG00000027694) ASRGL1 (ENSLAFG00000018231) #24 ENSLAFG00000016560 ENSLAFG00000023098 ENSLAFG00000027028 #27 ENSLAFG00000006290 #27 ENSLAFG00000004824 ##28 BEST1 (ENSLAFG00000004818) #29 RAB3IL1 (ENSLAFG00000004815) #30 FADS3 (ENSLAFG00000020716) #31 FADS2 (ENSLAFG00000004813) #32 FADS1 (ENSLAFG00000031402) #33 ENSLAFG00000032349 TMEM258 (ENSLAFG00000006503) #35 Marsupialia ANCESTRAL SPECIES 12 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a ##28 ENSGT00950000182841.b.a.a.b.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 Marsupialia_b ANCESTRAL SPECIES 15 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 ENSGT00940000157180 Diprotodontia ANCESTRAL SPECIES 26 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00400000022873 #12 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 ENSGT00940000157180 Diprotodontia_a ANCESTRAL SPECIES 15 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #24 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.b.a ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089 #35 ENSGT00530000063626.a #36 ENSGT00940000161192 #37 ENSGT00940000157180 Common wonbat MODERN SPECIES 901 ENSVURG00010001618 GNG3 (ENSVURG00010001979) #7 ENSVURG00010001984 ENSVURG00010001988 #9 UBXN1 (ENSVURG00010002011) #10 ENSVURG00010002083 #11 CSKMT (ENSVURG00010002090) #13 ENSVURG00010002105 #14 INTS5 (ENSVURG00010002114) #15 GANAB (ENSVURG00010002150) #16 B3GAT3 (ENSVURG00010002260) #17 ROM1 (ENSVURG00010002269) #18 EML3 (ENSVURG00010002281) #19 MTA2 (ENSVURG00010002299) #20 TUT1 (ENSVURG00010002331) #21 EEF1G (ENSVURG00010002339) #22 ENSVURG00010002356 ##23 ENSVURG00010002376 #23 ASRGL1 (ENSVURG00010002440) #24 INCENP (ENSVURG00010002477) #27 ENSVURG00010002790 ##28 ENSVURG00010002810 #29 RAB3IL1 (ENSVURG00010002828) #30 FADS3 (ENSVURG00010002868) #31 FADS2 (ENSVURG00010002917) #32 FADS1 (ENSVURG00010002983) #33 FEN1 (ENSVURG00010002995) #34 TMEM258 (ENSVURG00010003004) #35 MYRF (ENSVURG00010003029) #36 DAGLA (ENSVURG00010003069) #37 SYT7 (ENSVURG00010003104) koala MODERN SPECIES 179 GNG3 (ENSPCIG00000015258) #7 ENSPCIG00000015262 #8 ENSPCIG00000015265 #9 UBXN1 (ENSPCIG00000015272) #10 ENSPCIG00000015380 #11 ENSPCIG00000033746 #12 ENSPCIG00000015386 #14 CSKMT (ENSPCIG00000015383) #13 INTS5 (ENSPCIG00000015391) #15 GANAB (ENSPCIG00000015399) #16 B3GAT3 (ENSPCIG00000015411) #17 ROM1 (ENSPCIG00000015429) #18 EML3 (ENSPCIG00000015431) #19 MTA2 (ENSPCIG00000015521) #20 TUT1 (ENSPCIG00000017805) #21 EEF1G (ENSPCIG00000017806) #22 ENSPCIG00000003373 #23 ENSPCIG00000003378 ##23 ASRGL1 (ENSPCIG00000017813) #24 INCENP (ENSPCIG00000017818) #27 ENSPCIG00000035145 ##28 ENSPCIG00000033063 #29 RAB3IL1 (ENSPCIG00000036371) #30 FADS3 (ENSPCIG00000017847) #31 FADS2 (ENSPCIG00000017850) #32 FADS1 (ENSPCIG00000009947) #33 FEN1 (ENSPCIG00000010422) #34 TMEM258 (ENSPCIG00000010423) #35 MYRF (ENSPCIG00000010426) #36 DAGLA (ENSPCIG00000020645) #37 SYT7 (ENSPCIG00000013322) Wallaby MODERN SPECIES 9307 ENSMEUG00000000867 #22 Tasmanian devil MODERN SPECIES 5 TAF6L (ENSSHAG00000031966) POLR2G (ENSSHAG00000006006) ENSSHAG00000005891 ZBTB3 (ENSSHAG00000029780) HNRNPUL2 (ENSSHAG00000005445) GNG3 (ENSSHAG00000031455) #7 UBXN1 (ENSSHAG00000029413) #10 ENSSHAG00000004657 #15 UQCC3 (ENSSHAG00000029400) #11 CSKMT (ENSSHAG00000026048) #13 GANAB (ENSSHAG00000004416) #16 B3GAT3 (ENSSHAG00000004158) #17 EML3 (ENSSHAG00000003927) #19 TUT1 (ENSSHAG00000032323) #21 MTA2 (ENSSHAG00000003368) #20 EEF1G (ENSSHAG00000003032) #22 AHNAK (ENSSHAG00000027365) #23 ASRGL1 (ENSSHAG00000031675) #24 INCENP (ENSSHAG00000003794) #27 FTH1 (ENSSHAG00000026937) ##28 ENSSHAG00000023427 #29 ENSSHAG00000027266 #30 FADS3 (ENSSHAG00000007319) #31 FADS2 (ENSSHAG00000020917) #32 FADS1 (ENSSHAG00000031846) #33 FEN1 (ENSSHAG00000003713) #34 ENSSHAG00000003063 #35 ENSSHAG00000002443 #36 DAGLA (ENSSHAG00000024828) #37 SYT7 (ENSSHAG00000012521) PPP1R32 (ENSSHAG00000012268) Opossum DUPLICATION Opossum MODERN SPECIES 4 ENSMODG00000045532 ENSMODG00000040142 ENSMODG00000005789 ZBTB3 (ENSMODG00000007952) TTC9C (ENSMODG00000007947) GNG3 (ENSMODG00000007929) #7 HNRNPUL2 (ENSMODG00000007941) BSCL2 (ENSMODG00000007922) #8 LRRN4CL (ENSMODG00000007887) #9 INTS5 (ENSMODG00000007879) #15 GANAB (ENSMODG00000007869) #16 B3GAT3 (ENSMODG00000007801) #17 ENSMODG00000007785 #18 EML3 (ENSMODG00000007770) #19 TUT1 (ENSMODG00000007710) #21 ENSMODG00000007691 #22 ENSMODG00000043184 ##23 ENSMODG00000007627 #23 ASRGL1 (ENSMODG00000007616) #24 ENSMODG00000045936 INCENP (ENSMODG00000007601) #27 ENSMODG00000007582 ##28 FADS3 (ENSMODG00000007513) #31 ENSMODG00000007494 #32 LRRC10B (ENSMODG00000020369) ENSMODG00000049526 ENSMODG00000020368 ENSMODG00000020366 CPSF7 (ENSMODG00000020364) ENSMODG00000020362 TMEM138 (ENSMODG00000020360) Opossum MODERN SPECIES ENSMODG00000049664 ENSMODG00000025310 BMP4 (ENSMODG00000012951) ENSMODG00000039440 ENSMODG00000051444 DDHD1 (ENSMODG00000013016) FERMT2 (ENSMODG00000013030) MDGA2 (ENSMODG00000013060) LRFN5 (ENSMODG00000013085) ATL1 (ENSMODG00000013099) ENSMODG00000048956 SAV1 (ENSMODG00000013105) NIN (ENSMODG00000013128) PYGL (ENSMODG00000013150) TRIM9 (ENSMODG00000013160) ENSMODG00000023910 #22 ENSMODG00000038734 TMX1 (ENSMODG00000013196) ENSMODG00000013198 FRMD6 (ENSMODG00000013207) RTRAF (ENSMODG00000013211) ENSMODG00000013225 ENSMODG00000023912 MIPOL1 (ENSMODG00000012043) ENSMODG00000042630 FOXA1 (ENSMODG00000012030) ENSMODG00000012019 SSTR1 (ENSMODG00000012009) SEC23A (ENSMODG00000011994) GEMIN2 (ENSMODG00000048816) ENSMODG00000036840 Platypus MODERN SPECIES 14 ZBTB3 (ENSOANG00000049050) TTC9C (ENSOANG00000042865) ENSOANG00000040832 #8 GNG3 (ENSOANG00000039522) #7 LRRN4CL (ENSOANG00000001564) #9 UBXN1 (ENSOANG00000001565) #10 ENSOANG00000047873 ENSOANG00000036660 #13 C11orf98 (ENSOANG00000044590) #14 INTS5 (ENSOANG00000042076) #15 GANAB (ENSOANG00000040770) #16 ENSOANG00000005564 #17 EML3 (ENSOANG00000011033) #19 MTA2 (ENSOANG00000011032) #20 TUT1 (ENSOANG00000012458) #21 EEF1G (ENSOANG00000012459) #22 ENSOANG00000051157 #23 ENSOANG00000022312 ASRGL1 (ENSOANG00000014197) #24 ENSOANG00000032225 #27 ENSOANG00000012401 #28 ENSOANG00000037099 #29 RAB3IL1 (ENSOANG00000005198) #30 FADS3 (ENSOANG00000004111) #31 FADS2 (ENSOANG00000037735) #32 FADS1 (ENSOANG00000046623) #33 FEN1 (ENSOANG00000041443) #34 TMEM258 (ENSOANG00000022139) #35 MYRF (ENSOANG00000003410) #36 DAGLA (ENSOANG00000022487) #37 SYT7 (ENSOANG00000039173) Sauria ANCESTRAL SPECIES 65 ENSGT00390000008374 #15 ENSGT00390000002615 #14 ENSGT00510000049875 #13 ENSGT00940000156457 #10 ENSGT00940000156484.a ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Archelosauria ANCESTRAL SPECIES 72 ENSGT01010000222658 ENSGT00940000156457 #10 ENSGT00940000156484.a ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Cryptodira ANCESTRAL SPECIES 61 ENSGT00510000049875 #13 ENSGT01010000222658 ENSGT00940000156457 #10 ENSGT00940000156484.a ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00390000015553.a.a.a ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Chinese turtle MODERN SPECIES 323 TTC9C (ENSPSIG00000003786) ZBTB3 (ENSPSIG00000001786) ENSPSIG00000003872 POLR2G (ENSPSIG00000004285) EEF1G (ENSPSIG00000004341) #22 AHNAK (ENSPSIG00000005107) #23 ENSPSIG00000005776 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00950000186207 ENSGT01010000222658 ENSGT00940000156457 #10 ENSGT00940000156484.a ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00390000015553.a.a.a ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00390000018085.a.b.a ENSGT00940000154902.k #23 ENSGT00940000154902.j.a #23 ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 Testudinidae ANCESTRAL SPECIES 5 ENSGT00950000186207 ENSGT01010000222658 ENSGT00940000156457 #10 ENSGT00940000156484.a ENSGT00980000201892 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00390000015553.a.a.a ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00390000018085.a.b.a ENSGT00940000154902.k #23 ENSGT00940000154902.j.a #23 ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00960000189495 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 Abingdon island giant tortoise MODERN SPECIES 142 CSKMT (ENSCABG00000021903) #13 ENSCABG00000021904 UBXN1 (ENSCABG00000021905) #10 ENSCABG00000021907 ENSCABG00000021908 BSCL2 (ENSCABG00000021909) #8 ENSCABG00000021910 GNG3 (ENSCABG00000021911) #7 HNRNPUL2 (ENSCABG00000021912) TTC9C (ENSCABG00000021913) ENSCABG00000021914 ENSCABG00000021915 ENSCABG00000021916 ENSCABG00000021917 POLR2G (ENSCABG00000021918) EEF1G (ENSCABG00000021919) #22 ENSCABG00000021921 ENSCABG00000021922 #23 ENSCABG00000021923 #23 FAM120A (ENSCABG00000021925) PHF2 (ENSCABG00000021927) BARX1 (ENSCABG00000021928) PTPDC1 (ENSCABG00000021929) ENSCABG00000021930 Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005007583 ENSGEVG00005007540 UBXN1 (ENSGEVG00005007492) #10 ENSGEVG00005007440 ENSGEVG00005007419 BSCL2 (ENSGEVG00005007400) #8 GNG3 (ENSGEVG00005007379) #7 ENSGEVG00005007352 HNRNPUL2 (ENSGEVG00005007313) TTC9C (ENSGEVG00005007294) ENSGEVG00005007283 ENSGEVG00005007267 ENSGEVG00005007247 ENSGEVG00005007197 POLR2G (ENSGEVG00005007177) EEF1G (ENSGEVG00005007153) #22 RPL36AL (ENSGEVG00005007124) AHNAK (ENSGEVG00005007107) #23 FAM120A (ENSGEVG00005006605) PHF2 (ENSGEVG00005006330) BARX1 (ENSGEVG00005006201) ENSGEVG00005006181 ENSGEVG00005006143 WNT7A (ENSGEVG00005006076) FBLN2 (ENSGEVG00005005981) ENSGEVG00005005963 HDAC11 (ENSGEVG00005005930) NUP210 (ENSGEVG00005005766) IQSEC1 (ENSGEVG00005005708) ACAD9 (ENSGEVG00005005630) ENSGEVG00005005602 Emydidae ANCESTRAL SPECIES 9 ENSGT00510000049875 #13 ENSGT00950000186207 ENSGT01010000222658 ENSGT00940000156484.a ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00390000015553.a.a.a ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00390000018085.a.b.a ENSGT00940000154902.k #23 ENSGT00940000154902.j.a #23 ENSGT00530000063168.a.a.a ENSGT00940000158148 ENSGT00940000160218 ENSGT00390000004113 ENSGT00940000162955 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000157312 ENSGT00390000008330 painted turtle MODERN SPECIES 884 ENSCPBG00000017947 UBXN1 (ENSCPBG00000017949) #10 ENSCPBG00000017952 LRRN4CL (ENSCPBG00000017956) #9 BSCL2 (ENSCPBG00000017959) #8 GNG3 (ENSCPBG00000017960) #7 ENSCPBG00000017961 HNRNPUL2 (ENSCPBG00000017963) ENSCPBG00000017964 ENSCPBG00000017965 ENSCPBG00000017967 ENSCPBG00000017968 ZBTB3 (ENSCPBG00000017969) ENSCPBG00000017970 POLR2G (ENSCPBG00000017972) EEF1G (ENSCPBG00000017974) #22 ENSCPBG00000017976 ENSCPBG00000017978 #23 ENSCPBG00000017981 #23 ENSCPBG00000017984 #23 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 33 ENSTMTG00000012924 ENSTMTG00000012942 UBXN1 (ENSTMTG00000012978) #10 ENSTMTG00000012995 LRRN4CL (ENSTMTG00000013015) #9 BSCL2 (ENSTMTG00000013029) #8 GNG3 (ENSTMTG00000013041) #7 ENSTMTG00000013079 HNRNPUL2 (ENSTMTG00000013466) TTC9C (ENSTMTG00000013495) ENSTMTG00000013508 ENSTMTG00000013525 ZBTB3 (ENSTMTG00000013561) ENSTMTG00000013589 POLR2G (ENSTMTG00000013614) EEF1G (ENSTMTG00000013633) #22 ENSTMTG00000013656 #23 ENSTMTG00000013689 #23 FAM120A (ENSTMTG00000013895) PHF2 (ENSTMTG00000013921) BARX1 (ENSTMTG00000013965) PTPDC1 (ENSTMTG00000013986) ENSTMTG00000014035 WNT7A (ENSTMTG00000014061) FBLN2 (ENSTMTG00000014092) Three-toed box turtle MODERN SPECIES 846 ENSTMTG00000006205 #22 Archosauria ANCESTRAL SPECIES 76 ENSGT00940000154901.C.b.f.b.a.a ENSGT00940000154901.C.b.f.b.b.a.a ENSGT00940000154901.C.b.f.b.b.a.b ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Aves ANCESTRAL SPECIES 70 ENSGT00940000154901.C.b.f.b.a.a ENSGT00940000154901.C.b.f.b.b.a.a ENSGT00940000154901.C.b.f.b.b.a.b ENSGT00940000155070 ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000159147 ENSGT00940000154524.a ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Neognathae ANCESTRAL SPECIES 51 ENSGT00940000156954 #17 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00640000091486.a ENSGT00940000173994 ENSGT01060000249020 ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 Galloanserae ANCESTRAL SPECIES 137 ENSGT00390000007552 #22 ENSGT00940000154902.e #23 Phasianidae ANCESTRAL SPECIES 107 ENSGT00390000007552 #22 ENSGT00940000154902.e #23 Phasianidae_b ANCESTRAL SPECIES ENSGT00390000007552 #22 Chicken MODERN SPECIES 124 ENSGALG00010000732 INTS5 (ENSGALG00010000730) #15 ENSGALG00010000723 ENSGALG00010000719 EEF1G (ENSGALG00010000718) #22 ENSGALG00010000712 ENSGALG00010000710 ENSGALG00010000697 ENSGALG00010000735 Japanese quail MODERN SPECIES 54 CAPN1 (ENSCJPG00005002503) EEF1G (ENSCJPG00005002495) #22 ENSCJPG00005002490 #23 ZNHIT2 (ENSCJPG00005002483) Neognathae_b ANCESTRAL SPECIES 39 ENSGT00940000157482 ENSGT00980000200147 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 ENSGT00960000189643 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000157679 ENSGT00530000064165.a ENSGT01000000215390 ENSGT00940000157074 ENSGT00950000182985.b.b Neognathae_c ANCESTRAL SPECIES 59 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000157679 ENSGT01000000215390 ENSGT00940000157074 ENSGT00960000191711 Kakapo MODERN SPECIES 75 DRAP1 (ENSSHBG00005019305) ENSSHBG00005019307 ENSSHBG00005019310 ENSSHBG00005019314 DPF2 (ENSSHBG00005019320) CDC42EP2 (ENSSHBG00005019329) POLA2 (ENSSHBG00005019332) CAPN1 (ENSSHBG00005019338) SYVN1 (ENSSHBG00005019344) ENSSHBG00005019348 MRPL49 (ENSSHBG00005019350) FAU (ENSSHBG00005019353) WDR74 (ENSSHBG00005019356) INTS5 (ENSSHBG00005019375) #15 POLR2G (ENSSHBG00005019378) EEF1G (ENSSHBG00005019380) #22 AHNAK (ENSSHBG00005019382) #23 B4GAT1 (ENSSHBG00005019385) ENSSHBG00005019387 ENSSHBG00005019391 FKBP2 (ENSSHBG00005019395) ENSSHBG00005019397 ENSSHBG00005019401 ARL2 (ENSSHBG00005019404) ENSSHBG00005019406 Passeriformes ANCESTRAL SPECIES 43 ENSGT00900000141164 ENSGT00940000157482 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 ENSGT00960000189643 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000157679 ENSGT00530000064165.a ENSGT01000000215390 ENSGT00940000157074 ENSGT00950000182985.b.b Passeriformes_d ANCESTRAL SPECIES 38 ENSGT00900000141164 ENSGT00940000157482 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 ENSGT00960000189643 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000157679 ENSGT00530000064165.a ENSGT01000000215390 ENSGT00940000157074 ENSGT00950000182985.b.b Flycatcher MODERN SPECIES 484 ENSFALG00000028821 #22 ENSFALG00000011553 Passeriformes_g ANCESTRAL SPECIES 44 ENSGT00900000141164 ENSGT00940000157482 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 ENSGT00960000189643 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000157679 ENSGT00530000064165.a ENSGT01000000215390 ENSGT00940000157074 ENSGT00950000182985.b.b Passeroidea ANCESTRAL SPECIES 54 ENSGT00900000141164 ENSGT00940000157482 ENSGT00940000155031 ENSGT00940000154196.a ENSGT00390000014903 ENSGT00960000189643 ENSGT01000000214440.C ENSGT00390000007539 ENSGT00390000012589 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000008374 #15 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000157679 ENSGT00530000064165.a ENSGT01000000215390 ENSGT00940000157074 ENSGT00950000182985.b.b Zebra finch DUPLICATION Zebra finch MODERN SPECIES 38 ENSTGUG00000026539 ENSTGUG00000025733 STX5 (ENSTGUG00000021933) ENSTGUG00000027990 ENSTGUG00000022623 ENSTGUG00000020163 ENSTGUG00000022941 #7 ENSTGUG00000020286 #8 UBXN1 (ENSTGUG00000029060) #10 ENSTGUG00000025943 #15 ENSTGUG00000022402 ENSTGUG00000026145 #23 ENSTGUG00000024726 ENSTGUG00000019935 ENSTGUG00000019544 ENSTGUG00000024122 #22 ENSTGUG00000021122 ENSTGUG00000028351 ENSTGUG00000021607 ENSTGUG00000026301 ENSTGUG00000024115 ZNHIT2 (ENSTGUG00000028129) ENSTGUG00000023246 ENSTGUG00000022783 ENSTGUG00000020399 ENSTGUG00000019002 ENSTGUG00000023172 ENSTGUG00000026847 ENSTGUG00000024903 ENSTGUG00000019532 ENSTGUG00000029303 Zebra finch MODERN SPECIES 38 ENSTGUG00000021779 ENSTGUG00000026804 ENSTGUG00000018975 ENSTGUG00000023367 ENSTGUG00000019144 ENSTGUG00000025402 ENSTGUG00000024672 ENSTGUG00000025536 ENSTGUG00000027721 ENSTGUG00000024709 ENSTGUG00000020446 ENSTGUG00000029251 #8 ENSTGUG00000022895 ENSTGUG00000022510 #15 ENSTGUG00000014456 ENSTGUG00000019257 #22 ENSTGUG00000028725 #23 ENSTGUG00000023972 ENSTGUG00000029303 ENSTGUG00000019532 ENSTGUG00000024903 ENSTGUG00000026847 ENSTGUG00000023172 ENSTGUG00000019002 ENSTGUG00000020399 ENSTGUG00000022783 ENSTGUG00000023246 ZNHIT2 (ENSTGUG00000028129) ENSTGUG00000024115 ENSTGUG00000026301 ENSTGUG00000021607 Common canary MODERN SPECIES 476 EEF1G (ENSSCAG00000001024) #22 Medium ground finch MODERN SPECIES 651 ENSGFOG00000010769 #22 Lepidosauria ANCESTRAL SPECIES 47 ENSGT00390000002615 #14 ENSGT00510000049875 #13 ENSGT00940000156457 #10 ENSGT00940000156484.a ENSGT00940000162696 #9 ENSGT00390000011639 #8 ENSGT01100000263497.B #7 ENSGT00390000015553.a.a.a ENSGT00940000160376 ENSGT00940000161805 ENSGT00950000183181.A.b ENSGT00940000161852.z ENSGT00940000161486 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 tuatara MODERN SPECIES 174 GANAB (ENSSPUG00000008327) #16 ENSSPUG00000008394 #14 ENSSPUG00000008402 #14 CSKMT (ENSSPUG00000008416) #13 ENSSPUG00000008424 UBXN1 (ENSSPUG00000008433) #10 BSCL2 (ENSSPUG00000008452) #8 GNG3 (ENSSPUG00000008465) #7 ENSSPUG00000008490 TTC9C (ENSSPUG00000008571) ENSSPUG00000008578 ENSSPUG00000008591 ZBTB3 (ENSSPUG00000008600) ENSSPUG00000008606 POLR2G (ENSSPUG00000008614) EEF1G (ENSSPUG00000008624) #22 ENSSPUG00000008634 #23 ENSSPUG00000008651 #23 Episquamata ANCESTRAL SPECIES 28 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000155978.b Laterata ANCESTRAL SPECIES 60 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ENSGT00620000087966.b ENSGT00940000158249 ENSGT01030000234517.G ENSGT00930000151054 ENSGT00390000003837 ENSGT00530000063721.B ENSGT00940000161002 Common wall lizard MODERN SPECIES 7 ARHGEF2 (ENSPMRG00000017077) ENSPMRG00000017067 ANKRD35 (ENSPMRG00000017060) PIAS3 (ENSPMRG00000017047) NUDT17 (ENSPMRG00000017035) ENSPMRG00000017028 PAQR6 (ENSPMRG00000017021) SMG5 (ENSPMRG00000017013) TMEM79 (ENSPMRG00000017009) GLMP (ENSPMRG00000018637) CCT3 (ENSPMRG00000018628) ENSPMRG00000018624 SSR2 (ENSPMRG00000018621) CST6 (ENSPMRG00000018614) NAALADL1 (ENSPMRG00000018264) EEF1G (ENSPMRG00000018217) #22 ENSPMRG00000018212 #23 AHNAK (ENSPMRG00000018207) #23 SAC3D1 (ENSPMRG00000018206) ARL2 (ENSPMRG00000018200) SNX15 (ENSPMRG00000018184) ENSPMRG00000018172 ENSPMRG00000018169 PPP2R5B (ENSPMRG00000018160) ENSPMRG00000018145 ATG2A (ENSPMRG00000018117) EHD1 (ENSPMRG00000018098) CDC42BPG (ENSPMRG00000016721) SCYL1 (ENSPMRG00000016541) ENSPMRG00000016533 ENSPMRG00000016527 Argentine black and white tegu MODERN SPECIES 80 C11orf68 (ENSSMRG00000020366) DRAP1 (ENSSMRG00000020367) ENSSMRG00000020368 PELI3 (ENSSMRG00000020369) DPP3 (ENSSMRG00000020370) BBS1 (ENSSMRG00000020371) ENSSMRG00000020372 ENSSMRG00000020374 FOSL1 (ENSSMRG00000020375) CCDC85B (ENSSMRG00000020376) FIBP (ENSSMRG00000020377) EFEMP2 (ENSSMRG00000020378) MUS81 (ENSSMRG00000020379) CFL1 (ENSSMRG00000020380) CD248 (ENSSMRG00000020381) EEF1G (ENSSMRG00000020382) #22 ENSSMRG00000020384 #23 ENSSMRG00000020385 #23 SAC3D1 (ENSSMRG00000020386) ARL2 (ENSSMRG00000020387) SNX15 (ENSSMRG00000020388) ENSSMRG00000020389 GPHA2 (ENSSMRG00000020392) PPP2R5B (ENSSMRG00000020394) ATG2A (ENSSMRG00000021175) EHD1 (ENSSMRG00000021176) MEN1 (ENSSMRG00000021177) LTBP3 (ENSSMRG00000021178) SIPA1 (ENSSMRG00000021179) PCNX3 (ENSSMRG00000021180) MAP3K11 (ENSSMRG00000021181) Toxicofera ANCESTRAL SPECIES 78 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ENSGT00620000087966.b ENSGT00940000168352 Elapidae ANCESTRAL SPECIES 55 ENSGT01030000234598.b.b ENSGT00390000010028 ENSGT01070000254712 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ENSGT00620000087966.b ENSGT00940000168352 Indian cobra MODERN SPECIES 17 ENSNNAG00000005551 ENSNNAG00000005517 ENSNNAG00000005504 SSR2 (ENSNNAG00000005481) ENSNNAG00000005464 CCT3 (ENSNNAG00000005361) ENSNNAG00000005337 ENSNNAG00000005268 ZFPL1 (ENSNNAG00000005205) VPS51 (ENSNNAG00000005175) ENSNNAG00000005167 TM7SF2 (ENSNNAG00000005130) ENSNNAG00000005116 MRPL49 (ENSNNAG00000005098) ENSNNAG00000005048 EEF1G (ENSNNAG00000005019) #22 ENSNNAG00000005002 #23 ENSNNAG00000004831 #23 ENSNNAG00000004777 ARL2 (ENSNNAG00000004763) SNX15 (ENSNNAG00000004743) ENSNNAG00000004725 ENSNNAG00000004703 GPHA2 (ENSNNAG00000004684) PPP2R5B (ENSNNAG00000004617) ENSNNAG00000004593 ENSNNAG00000004581 ENSNNAG00000004560 USF1 (ENSNNAG00000004502) IRGC (ENSNNAG00000004477) ITLN1 (ENSNNAG00000004442) Elapidae_a ANCESTRAL SPECIES 119 ENSGT01030000234598.b.b ENSGT00390000010028 ENSGT01070000254712 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ENSGT00620000087966.b ENSGT00940000168352 Blue-lipped sea krait MODERN SPECIES 5542 ENSLLTG00000006370 #22 Acanthophiinae ANCESTRAL SPECIES 111 ENSGT01030000234598.b.b ENSGT00390000010028 ENSGT01070000254712 ENSGT00390000009753 ENSGT00390000001738 ENSGT00940000162464 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000017147 ENSGT00390000007479 ENSGT00390000017253 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000160988 ENSGT00940000157941 ENSGT00940000160125 ENSGT00940000164485 ENSGT00390000009379 ENSGT01030000234620.a.b.b.a ENSGT00940000154901.C.b.f.a ENSGT00620000087966.b ENSGT00940000168352 Eastern brown snake MODERN SPECIES 96 SMG5 (ENSPTXG00000016563) ENSPTXG00000016561 ENSPTXG00000016560 TMEM79 (ENSPTXG00000016559) ENSPTXG00000016558 ENSPTXG00000016557 CDCA5 (ENSPTXG00000016552) ENSPTXG00000016548 VPS51 (ENSPTXG00000016545) ENSPTXG00000016544 TM7SF2 (ENSPTXG00000016535) ZNHIT2 (ENSPTXG00000016529) FAU (ENSPTXG00000016527) MRPL49 (ENSPTXG00000016524) ENSPTXG00000016522 ENSPTXG00000016521 #22 ENSPTXG00000016519 #23 ENSPTXG00000016515 #23 SAC3D1 (ENSPTXG00000016512) ARL2 (ENSPTXG00000016510) SNX15 (ENSPTXG00000016507) ENSPTXG00000016505 GPHA2 (ENSPTXG00000016503) PPP2R5B (ENSPTXG00000016501) ENSPTXG00000016498 ATG2A (ENSPTXG00000016494) ENSPTXG00000016490 ENSPTXG00000016488 PC (ENSPTXG00000016469) ENSPTXG00000016468 ENSPTXG00000016467 Mainland tiger snake MODERN SPECIES 251 EHBP1L1 (ENSNSUG00000016782) ENSNSUG00000016833 F11R (ENSNSUG00000016835) USF1 (ENSNSUG00000016836) ARHGAP30 (ENSNSUG00000016837) ENSNSUG00000016838 NAALADL1 (ENSNSUG00000016839) ZFPL1 (ENSNSUG00000016840) VPS51 (ENSNSUG00000016841) ENSNSUG00000016842 TM7SF2 (ENSNSUG00000016846) ZNHIT2 (ENSNSUG00000016893) FAU (ENSNSUG00000016894) MRPL49 (ENSNSUG00000016895) ENSNSUG00000016896 ENSNSUG00000016897 #22 ENSNSUG00000016898 #23 ENSNSUG00000016899 #23 SAC3D1 (ENSNSUG00000016900) ARL2 (ENSNSUG00000016901) Anura ANCESTRAL SPECIES 169 ENSGT00950000182939.a.b.b ENSGT00940000156431 ENSGT00940000153377.B ENSGT00940000156574.C ENSGT00390000009663.g ENSGT00510000049875 #13 ENSGT00390000002615 #14 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000154348.c.a.b.a ENSGT00940000159914 #21 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000156646 ENSGT00390000015119 ENSGT01000000214440.C ENSGT00390000002089.a.a.b ENSGT00390000007539.d Frog MODERN SPECIES 4 c11orf24 (ENSXETG00000038757) lrp5 (ENSXETG00000010024) ENSXETG00000044443 ENSXETG00000047457 ubxn1 (ENSXETG00000005477) #10 lbhd1 (ENSXETG00000047364) #14 ENSXETG00000039364 ints5 (ENSXETG00000005580) #16 b3gat3 (ENSXETG00000005581) #17 rom1 (ENSXETG00000005582) #18 eml3 (ENSXETG00000005628) #19 ENSXETG00000043166 mta2 (ENSXETG00000005633) #20 ENSXETG00000005639 tut1 (ENSXETG00000005640) #21 eef1g (ENSXETG00000026372) #22 AHNAK (ENSXETG00000038117) #23 slc3a2 (ENSXETG00000019456) stx5 (ENSXETG00000019453) ENSXETG00000041844 nxf1 (ENSXETG00000019442) wdr74 (ENSXETG00000019440) atl3 (ENSXETG00000002686) ENSXETG00000049358 htr6 (ENSXETG00000002694) zfta (ENSXETG00000037021) dusp10.2 (ENSXETG00000035848) XB5901661 [provisional:rabepk] (ENSXETG00000032376) mark2 (ENSXETG00000002704) ENSXETG00000043061 rcor2 (ENSXETG00000002710) Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000021256 ENSLLEG00000021403 ENSLLEG00000021441 TTC9C (ENSLLEG00000021818) ENSLLEG00000021865 ENSLLEG00000021929 ZBTB3 (ENSLLEG00000021974) POLR2G (ENSLLEG00000022011) ENSLLEG00000022313 ENSLLEG00000026303 TAF6L (ENSLLEG00000026319) TMEM223 (ENSLLEG00000026412) MTA2 (ENSLLEG00000026576) #20 ENSLLEG00000027097 ENSLLEG00000027152 ENSLLEG00000027287 #22 ENSLLEG00000027500 AHNAK (ENSLLEG00000027522) #23 RPS6KA4 (ENSLLEG00000027560) SLC3A2 (ENSLLEG00000027760) WDR74 (ENSLLEG00000027938) STX5 (ENSLLEG00000028044) ENSLLEG00000028092 ENSLLEG00000028112 ENSLLEG00000028190 ENSLLEG00000028223 ENSLLEG00000028238 ENSLLEG00000028246 ENSLLEG00000028269 ENSLLEG00000028452 ENSLLEG00000028468 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000023681 ENSLLEG00000023661 ZC3H4 (ENSLLEG00000023548) ENSLLEG00000022635 SIPA1L3 (ENSLLEG00000021849) ENSLLEG00000021782 MAP3K10 (ENSLLEG00000021558) TTC9B (ENSLLEG00000021487) CCNP (ENSLLEG00000021409) AKT2 (ENSLLEG00000020883) ENSLLEG00000020794 ENSLLEG00000020219 PLD3 (ENSLLEG00000020004) C19orf47 (ENSLLEG00000019902) ENSLLEG00000019865 ENSLLEG00000031024 #22 ENSLLEG00000031019 NUMBL (ENSLLEG00000031017) COQ8B (ENSLLEG00000031013) ENSLLEG00000031009 ENSLLEG00000031008 ITPKC (ENSLLEG00000031002) ACTMAP (ENSLLEG00000030996) SNRPA (ENSLLEG00000030992) MIA (ENSLLEG00000030981) ENSLLEG00000030969 EGLN2 (ENSLLEG00000030964) ENSLLEG00000030959 ENSLLEG00000030951 ENSLLEG00000030947 ENSLLEG00000030941 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 254 ENSLACG00000009972 DPF2 (ENSLACG00000010180) OTUB1 (ENSLACG00000010416) ENSLACG00000022173 ENSLACG00000010718 slc8a4b (ENSLACG00000011133) ACTA1 (ENSLACG00000012045) NAA40 (ENSLACG00000012164) RCOR2 (ENSLACG00000012299) MARK2 (ENSLACG00000012526) PLCB3 (ENSLACG00000013109) PPP1R14B (ENSLACG00000013601) FKBP2 (ENSLACG00000013806) NUDT22 (ENSLACG00000013896) ENSLACG00000022630 eef1g (ENSLACG00000014700) #22 ENSLACG00000015241 #23 ENSLACG00000022107 FLRT1 (ENSLACG00000016740) ENSLACG00000016770 STIP1 (ENSLACG00000016815) FERMT3 (ENSLACG00000016877) TRPT1 (ENSLACG00000016922) ENSLACG00000016948 rarres3l (ENSLACG00000016982) KCNK4 (ENSLACG00000017130) ENSLACG00000017213 CSKMT (ENSLACG00000017239) #13 INTS5 (ENSLACG00000017252) #15 GANAB (ENSLACG00000017273) #16 EML3 (ENSLACG00000017363) #19 Coelacanth MODERN SPECIES 324 ZC3H4 (ENSLACG00000016248) ENSLACG00000016371 zgc:154093 (ENSLACG00000016524) ppp1r14ab (ENSLACG00000016603) ENSLACG00000022177 KCNK6 (ENSLACG00000016730) ENSLACG00000016768 LTBP4 (ENSLACG00000016869) ENSLACG00000017469 YIF1B (ENSLACG00000017513) ENSLACG00000017554 PINK1 (ENSLACG00000017697) BLVRB (ENSLACG00000017715) ENSLACG00000017736 si:dkey-177p2.6 (ENSLACG00000017768) ENSLACG00000017814 #22 PRX (ENSLACG00000017886) HIPK4 (ENSLACG00000017906) PLD3 (ENSLACG00000017919) Actinopterygii ANCESTRAL SPECIES 168 ENSGT00940000154901.C.b ENSGT00940000159147 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073 ENSGT00940000161450 ENSGT00940000159375 ENSGT00940000154911 ENSGT00390000013444.a.b.b ENSGT00390000002731 ENSGT00940000161486 ENSGT00390000004842 ENSGT00390000007539 ENSGT00940000172086 ENSGT00390000011180 ENSGT00940000168756 ENSGT00940000160303.a.a ENSGT00940000156954 #17 ENSGT00390000014903 Reedfish MODERN SPECIES ENSECRG00000010046 ccdc77 (ENSECRG00000010067) hdhd5 (ENSECRG00000010083) RAB19 (ENSECRG00000010093) ENSECRG00000010106 kdm7ab (ENSECRG00000010121) cskmt (ENSECRG00000010141) #13 otub1a (ENSECRG00000010147) ENSECRG00000010156 slc22a6l (ENSECRG00000010165) capn1 (ENSECRG00000010180) syvn1 (ENSECRG00000010204) GPR137 (ENSECRG00000010214) ENSECRG00000010229 polr2g (ENSECRG00000010250) eef1g (ENSECRG00000010267) #22 AHNAK (ENSECRG00000010283) #23 macrod1 (ENSECRG00000010304) FLRT1 (ENSECRG00000010329) stip1 (ENSECRG00000010371) fermt3b (ENSECRG00000010376) trpt1 (ENSECRG00000010387) ENSECRG00000010392 ENSECRG00000010397 ENSECRG00000010403 nxf1a (ENSECRG00000010413) LRRN4CL (ENSECRG00000010434) #9 bscl2l (ENSECRG00000010443) #8 gng3 (ENSECRG00000010461) #7 adssl (ENSECRG00000010468) HNRNPUL2 (ENSECRG00000010478) Neopterygii ANCESTRAL SPECIES 420 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073 Spotted gar MODERN SPECIES 658 ENSLOCG00000014587 ENSLOCG00000017569 ENSLOCG00000017568 ENSLOCG00000014586 ENSLOCG00000014580 ##20 yif1b (ENSLOCG00000014575) blvrb (ENSLOCG00000014574) SPTBN4 (ENSLOCG00000014564) SHKBP1 (ENSLOCG00000014556) ENSLOCG00000014553 ENSLOCG00000014544 ENSLOCG00000014542 ENSLOCG00000017567 ENSLOCG00000014537 kcnk6 (ENSLOCG00000014534) eef1g (ENSLOCG00000014527) #22 ENSLOCG00000014524 ENSLOCG00000014520 C5AR2 (ENSLOCG00000017566) ENSLOCG00000014516 fbxo46 (ENSLOCG00000017565) coq8b (ENSLOCG00000014507) ENSLOCG00000014504 ENSLOCG00000014497 ENSLOCG00000014492 gabarapa (ENSLOCG00000014491) ctdnep1b (ENSLOCG00000014490) elp5 (ENSLOCG00000014484) phf23b (ENSLOCG00000014481) plscr3b (ENSLOCG00000014476) tnk1 (ENSLOCG00000014472) Osteoglossocephalai ANCESTRAL SPECIES 57 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047 ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00980000198740 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00970000197172 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000156837 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e Osteoglossiformes ANCESTRAL SPECIES 52 ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00940000153899.a.a ENSGT00940000153322.B.d.a.u ENSGT00940000153322.B.d.a.v ENSGT00390000017284.b ENSGT00940000162170 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000164578.a.b ENSGT01040000240444.A.a.b ENSGT01100000263537.b.a.a.a.a.a ENSGT01030000234590.B.a.a.e.b ENSGT00390000016193 ENSGT00940000153916.A.a.c ENSGT00940000165992.a.a ENSGT00940000153783.b.a.a.a ENSGT00940000156309.B.f ENSGT00940000166308 ENSGT00940000165351 ENSGT00530000063882.b.qb P. kingsleyae MODERN SPECIES 56 thoc3 (ENSPKIG00000000208) ENSPKIG00000000242 tmem216 (ENSPKIG00000000272) ENSPKIG00000000293 ENSPKIG00000000333 ENSPKIG00000000367 NEUROG1 (ENSPKIG00000000377) ARAP3 (ENSPKIG00000000421) ENSPKIG00000000534 tgfbi (ENSPKIG00000000568) smad5 (ENSPKIG00000000713) syvn1 (ENSPKIG00000000759) gpr137 (ENSPKIG00000000816) ENSPKIG00000000849 polr2g (ENSPKIG00000000902) eef1g (ENSPKIG00000000945) #22 ENSPKIG00000000970 ENSPKIG00000000988 #23 klhl4 (ENSPKIG00000001029) her8a (ENSPKIG00000001067) ENSPKIG00000001079 ENSPKIG00000001090 tm4sf21b (ENSPKIG00000001100) MBLAC1 (ENSPKIG00000001117) MPDU1 (ENSPKIG00000001131) sox19b (ENSPKIG00000001144) eif4a1a (ENSPKIG00000001167) senp3a (ENSPKIG00000001302) tnk1 (ENSPKIG00000001359) plscr3b (ENSPKIG00000001457) phf23b (ENSPKIG00000001497) Asian bonytongue MODERN SPECIES 4 thoc3 (ENSSFOG00015001867) ENSSFOG00015025339 tmem216 (ENSSFOG00015001846) ENSSFOG00015001824 ENSSFOG00015027205 ENSSFOG00015026121 NEUROG1 (ENSSFOG00015001781) ARAP3 (ENSSFOG00015001516) ENSSFOG00015031999 tgfbi (ENSSFOG00015001411) smad5 (ENSSFOG00015001384) syvn1 (ENSSFOG00015001279) gpr137 (ENSSFOG00015001265) ENSSFOG00015001255 polr2g (ENSSFOG00015001245) eef1g (ENSSFOG00015001181) #22 AHNAK (ENSSFOG00015032209) #23 klhl4 (ENSSFOG00015001096) her8a (ENSSFOG00015030680) ENSSFOG00015024675 ENSSFOG00015029635 tm4sf21b (ENSSFOG00015001044) MBLAC1 (ENSSFOG00015031251) MPDU1 (ENSSFOG00015001010) ENSSFOG00015025772 eif4a1a (ENSSFOG00015000931) senp3a (ENSSFOG00015000884) tnk1 (ENSSFOG00015000813) plscr3b (ENSSFOG00015000798) ENSSFOG00015000794 elp5 (ENSSFOG00015000787) Clupeocephala ANCESTRAL SPECIES 28 ENSGT00940000177647 ENSGT00510000048167.b.b ENSGT00940000153899.a.a ENSGT01030000235165 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000165073.a.b.b.b.a.a ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00390000010669 ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00940000156837 Otomorpha ANCESTRAL SPECIES 34 ENSGT00940000177647 ENSGT00510000048167.b.b ENSGT00940000153899.a.a ENSGT01030000235165 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00390000010669 ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00710000106792 Clupeiformes ANCESTRAL SPECIES 192 ENSGT01030000235165 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00390000010669 ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00710000106792 Denticle herring MODERN SPECIES 9 rell2 (ENSDCDG00000032282) fmr1 (ENSDCDG00000029851) eif4ebp3l (ENSDCDG00000029774) ENSDCDG00000029773 st3gal5 (ENSDCDG00000029772) syvn1 (ENSDCDG00000029766) smad5 (ENSDCDG00000029750) tgfbi (ENSDCDG00000029723) ENSDCDG00000029718 ARAP3 (ENSDCDG00000028406) neurog1 (ENSDCDG00000028374) ENSDCDG00000028372 gpr137 (ENSDCDG00000028368) ENSDCDG00000028366 polr2g (ENSDCDG00000028359) eef1g (ENSDCDG00000028321) #22 klhl4 (ENSDCDG00000028316) PCDH11Y (ENSDCDG00000028315) ENSDCDG00000028311 TSC22D3 (ENSDCDG00000028310) MID2 (ENSDCDG00000028153) ENSDCDG00000028145 ENSDCDG00000028144 PCDH1 (ENSDCDG00000028139) cd74a (ENSDCDG00000028134) SLC35A4 (ENSDCDG00000028131) ENSDCDG00000028130 HMGXB3 (ENSDCDG00000028129) csf1ra (ENSDCDG00000027085) pdgfrb (ENSDCDG00000026545) ENSDCDG00000026521 Atlantic herring MODERN SPECIES 12 ENSCHAG00000002503 ENSCHAG00000002414 ENSCHAG00000002357 ENSCHAG00000002321 ENSCHAG00000002265 ENSCHAG00000002243 neurog1 (ENSCHAG00000002230) ARAP3 (ENSCHAG00000001152) ENSCHAG00000000554 tgfbi (ENSCHAG00000023860) smad5 (ENSCHAG00000023838) syvn1 (ENSCHAG00000023821) gpr137 (ENSCHAG00000023814) ENSCHAG00000023803 polr2g (ENSCHAG00000023794) eef1g (ENSCHAG00000023739) #22 ENSCHAG00000023732 ENSCHAG00000023719 #23 klhl4 (ENSCHAG00000023590) PCDH11Y (ENSCHAG00000023575) ENSCHAG00000023567 TSC22D3 (ENSCHAG00000023557) MID2 (ENSCHAG00000023113) nek12 (ENSCHAG00000023088) kif11 (ENSCHAG00000023033) pin4 (ENSCHAG00000023021) acsl4a (ENSCHAG00000022333) nxt2 (ENSCHAG00000022296) psmd10 (ENSCHAG00000022275) ENSCHAG00000022266 xiap (ENSCHAG00000022233) Otophysi ANCESTRAL SPECIES 43 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000158355 ENSGT00950000183059.a ENSGT00940000153986.b.b ENSGT00940000157743 ENSGT00940000155437 ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00390000008104 ENSGT00510000048574 Characiphysae ANCESTRAL SPECIES 7 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000158355 ENSGT00950000183059.a ENSGT00940000153986.b.b ENSGT00940000157743 ENSGT00940000155437 ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT01030000234518.A.a.b ENSGT00950000182859.A.a.b.b.d.a Characiphysae_b ANCESTRAL SPECIES 7 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000158355 ENSGT00950000183059.a ENSGT00940000153986.b.b ENSGT00940000157743 ENSGT00940000155437 ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902.ob #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00950000182859.A.a.b.b.d.a ENSGT00940000155650.a.b Characoidei ANCESTRAL SPECIES 2 ENSGT00390000003288 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000158355 ENSGT00950000183059.a ENSGT00940000153986.b.b ENSGT00940000157743 ENSGT00940000155437 ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902.ob #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00940000155650.a.b ENSGT00940000161042 Red-bellied piranha MODERN SPECIES 14 gm2a (ENSPNAG00000024828) ENSPNAG00000006096 emx3 (ENSPNAG00000007051) b4galt7 (ENSPNAG00000024930) tmed9 (ENSPNAG00000024939) lman2 (ENSPNAG00000006253) ENSPNAG00000025026 gpr137 (ENSPNAG00000025039) syvn1 (ENSPNAG00000003864) smad5 (ENSPNAG00000025079) tgfbi (ENSPNAG00000025091) ENSPNAG00000003872 ARAP3 (ENSPNAG00000025160) neurog1 (ENSPNAG00000025176) polr2g (ENSPNAG00000025210) eef1g (ENSPNAG00000025293) #22 AHNAK (ENSPNAG00000007071) #23 klhl4 (ENSPNAG00000025398) PCDH11Y (ENSPNAG00000025447) TSC22D3 (ENSPNAG00000025489) MID2 (ENSPNAG00000003941) nek12 (ENSPNAG00000025662) pin4 (ENSPNAG00000025676) acsl4a (ENSPNAG00000025747) nxt2 (ENSPNAG00000025785) psmd10 (ENSPNAG00000007130) xiap (ENSPNAG00000025816) STAG2 (ENSPNAG00000026034) tcerg1a (ENSPNAG00000026207) GPR151 (ENSPNAG00000026230) ENSPNAG00000026251 Mexicana tetra MODERN SPECIES 16 emx3 (ENSAMXG00000043171) b4galt7 (ENSAMXG00000010933) tmed9 (ENSAMXG00000010940) ENSAMXG00000043673 lman2 (ENSAMXG00000029169) ENSAMXG00000010972 gpr137 (ENSAMXG00000029581) syvn1 (ENSAMXG00000003339) smad5 (ENSAMXG00000010992) tgfbi (ENSAMXG00000011006) ENSAMXG00000041017 ARAP3 (ENSAMXG00000011055) neurog1 (ENSAMXG00000024953) ENSAMXG00000042092 polr2g (ENSAMXG00000030439) eef1g (ENSAMXG00000040220) #22 ENSAMXG00000037163 ENSAMXG00000030906 #23 ENSAMXG00000030707 #23 klhl4 (ENSAMXG00000011138) ENSAMXG00000039191 ENSAMXG00000002021 tdg.1 (ENSAMXG00000029149) TDG (ENSAMXG00000002041) uqcc6 (ENSAMXG00000040996) NT5DC3 (ENSAMXG00000033802) ENSAMXG00000002058 ENSAMXG00000002068 ENSAMXG00000002072 met (ENSAMXG00000002094) PCDH1 (ENSAMXG00000002124) Electric eel MODERN SPECIES 12 PPP1R16A (ENSEEEG00000017925) foxh1 (ENSEEEG00000017920) oplah (ENSEEEG00000017910) stat5b (ENSEEEG00000017890) ghdc (ENSEEEG00000017867) KCNH4 (ENSEEEG00000017863) RAB5C (ENSEEEG00000017790) ENSEEEG00000017789 ENSEEEG00000017788 ENSEEEG00000017186 ACLY (ENSEEEG00000017066) klhl11 (ENSEEEG00000017059) fkbp10b (ENSEEEG00000017039) GPT (ENSEEEG00000016897) eef1g (ENSEEEG00000016854) #22 ENSEEEG00000016847 ENSEEEG00000016843 #23 klhl4 (ENSEEEG00000016835) ENSEEEG00000016831 PCDH11Y (ENSEEEG00000016829) TSC22D3 (ENSEEEG00000016828) MID2 (ENSEEEG00000016758) nek12 (ENSEEEG00000016753) pin4 (ENSEEEG00000016752) acsl4a (ENSEEEG00000016749) nxt2 (ENSEEEG00000016748) psmd10 (ENSEEEG00000016747) xiap (ENSEEEG00000016746) STAG2 (ENSEEEG00000016617) tcerg1a (ENSEEEG00000016575) Channel catfish MODERN SPECIES 27 ccdc69 (ENSIPUG00000001017) emx1 (ENSIPUG00000000998) ENSIPUG00000000995 b4galt7 (ENSIPUG00000000943) tmed9 (ENSIPUG00000000938) lman2 (ENSIPUG00000000893) ENSIPUG00000000877 gpr137 (ENSIPUG00000000866) syvn1 (ENSIPUG00000000845) smad5 (ENSIPUG00000000837) tgfbi (ENSIPUG00000000799) ENSIPUG00000000787 Arap3 (ENSIPUG00000000686) neurog1 (ENSIPUG00000000679) polr2g (ENSIPUG00000000671) eef1g (ENSIPUG00000000647) #22 ENSIPUG00000000636 ENSIPUG00000000628 #23 klhl4 (ENSIPUG00000000619) PCDH11Y (ENSIPUG00000000605) ENSIPUG00000000587 TSC22D3 (ENSIPUG00000000571) mid2 (ENSIPUG00000000550) nek12 (ENSIPUG00000000543) pin4 (ENSIPUG00000000539) Acsl4 (ENSIPUG00000000524) nxt2 (ENSIPUG00000000517) psmd10 (ENSIPUG00000000509) xiap (ENSIPUG00000000502) xiap (ENSIPUG00000000501) stag2 (ENSIPUG00000000475) Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747.eb.b ENSGT00940000159747.eb.a ENSGT00940000158355 ENSGT00950000183059.a ENSGT00940000153986.b.b ENSGT00940000157743 ENSGT00940000155437.ib.b ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 ENSGT00940000167363 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00940000165959 ENSGT00510000047029 ENSGT00940000157427.j ENSGT00940000156381 ENSGT00940000153404.a ENSGT00940000166874 ENSGT00950000182972.a.a.a.a.a.e ENSGT00390000007135 ENSGT00940000164327.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 79 ENSGT00950000183059.a.c ENSGT00940000153986.b.b.b ENSGT00940000157743.o ENSGT00940000153986.b.b.a ENSGT00940000157743.p ENSGT00940000155437.ib.b ENSGT00530000063860.a.j ENSGT00940000164810.b ENSGT00940000158869.o.b ENSGT00940000167363.a ENSGT00530000063860.a.i ENSGT00940000164810.a ENSGT00940000158869.o.a ENSGT00940000167363.b ENSGT00390000008975 ENSGT00390000007552.o.a #22 ENSGT00940000165073.a.a.l.a ENSGT00390000007552.o.b #22 ENSGT00940000154902 #23 ENSGT00940000159818.n ENSGT00940000158335.j ENSGT00940000159818.m ENSGT00940000158335.i ENSGT00940000156656 ENSGT00940000159460.i ENSGT00940000165959.a ENSGT00510000047029.c.b ENSGT00940000157427.j.a ENSGT00940000153404.a.lb ENSGT00940000166874.e ENSGT00950000182972.a.a.a.a.a.e.b Goldfish DUPLICATION Goldfish MODERN SPECIES 32 tgfbi (ENSCARG00000010607) ENSCARG00000010805 ENSCARG00000010874 neurog1 (ENSCARG00000011833) ENSCARG00000011840 ENSCARG00000011843 HS3ST1 (ENSCARG00000011848) ENSCARG00000011860 ENSCARG00000011865 ENSCARG00000011870 ENSCARG00000011875 ENSCARG00000011895 slc25a48 (ENSCARG00000011904) neurog1 (ENSCARG00000011917) polr2g (ENSCARG00000011922) eef1g (ENSCARG00000011947) #22 ENSCARG00000012035 zdhhc9 (ENSCARG00000012053) c1galt1c1 (ENSCARG00000012061) mcts1 (ENSCARG00000012063) cul4b (ENSCARG00000012174) lamp2 (ENSCARG00000014210) septin6 (ENSCARG00000014244) ATP1B4 (ENSCARG00000014931) TMEM255A (ENSCARG00000014959) nkap (ENSCARG00000014986) ndufa1 (ENSCARG00000015009) upf3b (ENSCARG00000015026) RPL39 (ENSCARG00000006053) septin6 (ENSCARG00000006082) rab41 (ENSCARG00000006177) Goldfish MODERN SPECIES 32 ATP11C (ENSCARG00000042948) ENSCARG00000052577 f9a (ENSCARG00000052987) ENSCARG00000053026 ENSCARG00000053144 TENM2 (ENSCARG00000053179) ENSCARG00000053990 zgc:153146 (ENSCARG00000054033) pdlim3b (ENSCARG00000054104) SORBS2 (ENSCARG00000054221) ENSCARG00000054348 cyp4v2b (ENSCARG00000054389) TSC22D3 (ENSCARG00000054463) MID2 (ENSCARG00000054503) polr2g (ENSCARG00000054519) eef1g (ENSCARG00000054538) #22 ENSCARG00000054603 ENSCARG00000054648 #23 klhl4 (ENSCARG00000054716) ENSCARG00000054950 ENSCARG00000055668 tgfbi (ENSCARG00000055704) smad5 (ENSCARG00000055822) syvn1 (ENSCARG00000055876) gpr137 (ENSCARG00000055956) ENSCARG00000055982 lman2 (ENSCARG00000056024) tmed9 (ENSCARG00000056412) b4galt7 (ENSCARG00000056461) emx3 (ENSCARG00000056500) ENSCARG00000056521 Cyprininae_a ANCESTRAL SPECIES ENSGT00390000007552.o.a #22 Common carp reference MODERN SPECIES 35 gm2a (ENSCCRG00000042859) ENSCCRG00000042862 emx3 (ENSCCRG00000067039) b4galt7 (ENSCCRG00000001570) ENSCCRG00000053896 lman2 (ENSCCRG00000001683) ENSCCRG00000028346 gpr137 (ENSCCRG00000022573) syvn1 (ENSCCRG00000028362) smad5 (ENSCCRG00000081851) tgfbi (ENSCCRG00000006206) ENSCCRG00000006286 ENSCCRG00000006708 neurog1 (ENSCCRG00000064304) polr2g (ENSCCRG00000007324) eef1g (ENSCCRG00000006688) #22 ENSCCRG00000078892 ENSCCRG00000052237 ENSCCRG00000039785 #23 klhl4 (ENSCCRG00000006683) ENSCCRG00000035361 ENSCCRG00000070900 ENSCCRG00000067947 nek12 (ENSCCRG00000063486) acsl4a (ENSCCRG00000057379) psmd10 (ENSCCRG00000024270) xiap (ENSCCRG00000070329) ENSCCRG00000005197 hmmr (ENSCCRG00000005489) insb (ENSCCRG00000027564) ENSCCRG00000042371 Cyprininae ANCESTRAL SPECIES 79 ENSGT00940000157743.o ENSGT00940000153986.b.b.a ENSGT00940000157743.p ENSGT00940000155437.ib.b ENSGT00530000063860.a.j ENSGT00940000164810.b ENSGT00940000158869.o.b ENSGT00940000167363.a ENSGT00530000063860.a.i ENSGT00940000164810.a ENSGT00940000158869.o.a ENSGT00940000167363.b ENSGT00390000008975 ENSGT00390000007552.o.a #22 ENSGT00940000165073.a.a.l.a ENSGT00390000007552.o.b #22 ENSGT00940000154902 #23 ENSGT00940000159818.n ENSGT00940000158335.j ENSGT00940000159818.m ENSGT00940000158335.i ENSGT00940000156656 ENSGT00940000159460.i ENSGT00940000165959.a ENSGT00510000047029.c.b ENSGT00940000157427.j.a ENSGT00940000153404.a.lb ENSGT00940000166874.e ENSGT00950000182972.a.a.a.a.a.e.b ENSGT00390000007135.f ENSGT00940000164327.b.d Cyprininae_a ANCESTRAL SPECIES 104 ENSGT00940000157425.A.a ENSGT00940000157712.k ENSGT00940000159747.eb.b.a ENSGT00940000158355.e ENSGT00950000183059.a.c ENSGT00940000153986.b.b.b ENSGT00940000157743.o ENSGT00940000155437.ib.a ENSGT00530000063860.a.i ENSGT00940000164810.a ENSGT00940000158869.o.a ENSGT00940000167363.b ENSGT00390000008975 ENSGT00390000007552.p #22 ENSGT00940000165073.a.a.l.b ENSGT00390000007552.o.b #22 ENSGT00940000154902 #23 ENSGT00940000159818.n ENSGT00940000158335.j ENSGT00940000159818.m ENSGT00940000158335.i ENSGT00940000156656 ENSGT00940000159460.j ENSGT00940000165959.b ENSGT00510000047029.c.a ENSGT00940000157427.j.b ENSGT00940000156381 ENSGT00940000153404.a.mb ENSGT00940000166874.f ENSGT00950000182972.a.a.a.a.a.e.a ENSGT00390000007135.e Common carp reference MODERN SPECIES 20 ENSCCRG00000072739 gm2a (ENSCCRG00000076179) emx3 (ENSCCRG00000082787) b4galt7 (ENSCCRG00000073337) tmed9 (ENSCCRG00000001604) lman2 (ENSCCRG00000056551) ENSCCRG00000039346 gpr137 (ENSCCRG00000063404) syvn1 (ENSCCRG00000022570) smad5 (ENSCCRG00000006190) tgfbi (ENSCCRG00000028420) ENSCCRG00000029042 ENSCCRG00000029064 neurog1 (ENSCCRG00000057953) polr2g (ENSCCRG00000026502) eef1g (ENSCCRG00000026445) #22 ENSCCRG00000056765 #23 klhl4 (ENSCCRG00000052220) ENSCCRG00000041569 ENSCCRG00000077164 ENSCCRG00000072443 nek12 (ENSCCRG00000061803) pin4 (ENSCCRG00000046373) acsl4a (ENSCCRG00000061078) nxt2 (ENSCCRG00000046946) psmd10 (ENSCCRG00000080304) xiap (ENSCCRG00000024279) ENSCCRG00000078311 insb (ENSCCRG00000005477) ENSCCRG00000059919 zgc:153146 (ENSCCRG00000047679) Goldfish MODERN SPECIES 5 gm2a (ENSCARG00000005297) ENSCARG00000005291 ENSCARG00000005283 emx3 (ENSCARG00000005275) b4galt7 (ENSCARG00000005267) TMED9 (ENSCARG00000005242) lman2 (ENSCARG00000004838) ENSCARG00000004803 gpr137 (ENSCARG00000004784) syvn1 (ENSCARG00000004758) smad5 (ENSCARG00000004735) tgfbi (ENSCARG00000004019) ENSCARG00000003868 ENSCARG00000003263 polr2g (ENSCARG00000003185) eef1g (ENSCARG00000003125) #22 ENSCARG00000003105 klhl4 (ENSCARG00000002891) ENSCARG00000002854 ENSCARG00000002829 ENSCARG00000002811 USP38 (ENSCARG00000002748) gab1 (ENSCARG00000002694) hhip (ENSCARG00000002126) smad1 (ENSCARG00000041956) mmaa (ENSCARG00000041935) ENSCARG00000041727 ZNF827 (ENSCARG00000041677) lsm6 (ENSCARG00000041648) SSH3 (ENSCARG00000041601) mrpl18 (ENSCARG00000041588) Cyprininae ANCESTRAL SPECIES 1463 ENSGT00390000007552.p #22 ENSGT00940000165073.a.a.l.b Cyprininae_a ANCESTRAL SPECIES 104 ENSGT00390000003288.s.a.a ENSGT00950000183026.A.a.b.a ENSGT00940000157425.A.a ENSGT00940000157712.k ENSGT00940000159747.eb.b.a ENSGT00940000158355.e ENSGT00950000183059.a.c ENSGT00940000153986.b.b.b ENSGT00940000157743.o ENSGT00940000155437.ib.a ENSGT00530000063860.a.i ENSGT00940000164810.a ENSGT00940000158869.o.a ENSGT00940000167363.b ENSGT00390000008975 ENSGT00390000007552.p #22 ENSGT00940000165073.a.a.l.b ENSGT00390000007552.o.b #22 ENSGT00940000154902 #23 ENSGT00940000159818.n ENSGT00940000158335.j ENSGT00940000159818.m ENSGT00940000158335.i ENSGT00940000156656 ENSGT00940000159460.j ENSGT00940000165959.b ENSGT00510000047029.c.a ENSGT00940000157427.j.b ENSGT00940000156381 ENSGT00940000153404.a.mb ENSGT00940000166874.f Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 249 ENSSGRG00000020234 emx3 (ENSSGRG00000020227) b4galt7 (ENSSGRG00000020223) tmed9 (ENSSGRG00000020222) ENSSGRG00000020221 ENSSGRG00000020076 gpr137 (ENSSGRG00000020071) syvn1 (ENSSGRG00000020042) ENSSGRG00000020036 ENSSGRG00000020035 tgfbi (ENSSGRG00000019758) ENSSGRG00000019755 ENSSGRG00000019563 neurog1 (ENSSGRG00000019554) polr2g (ENSSGRG00000019548) eef1g (ENSSGRG00000019526) #22 ENSSGRG00000019524 ENSSGRG00000019517 #23 ENSSGRG00000019511 Golden-line barbel MODERN SPECIES 878 emx3 (ENSSGRG00000026744) b4galt7 (ENSSGRG00000026749) tmed9 (ENSSGRG00000026755) ENSSGRG00000026756 ENSSGRG00000026757 lman2 (ENSSGRG00000026758) ENSSGRG00000026768 gpr137 (ENSSGRG00000026770) syvn1 (ENSSGRG00000026786) smad5 (ENSSGRG00000027263) tgfbi (ENSSGRG00000027323) ENSSGRG00000027408 ENSSGRG00000027436 neurog1 (ENSSGRG00000027577) polr2g (ENSSGRG00000027580) eef1g (ENSSGRG00000027622) #22 ENSSGRG00000027770 ENSSGRG00000027771 #23 klhl4 (ENSSGRG00000027773) Zebrafish MODERN SPECIES 5 ENSDARG00000111091 emx3 (ENSDARG00000020417) b4galt7 (ENSDARG00000021899) pimr212 (ENSDARG00000037246) tmed9 (ENSDARG00000004261) lman2 (ENSDARG00000061854) ENSDARG00000061845 gpr137 (ENSDARG00000037244) syvn1 (ENSDARG00000017842) smad5 (ENSDARG00000037238) tgfbi (ENSDARG00000071586) ENSDARG00000071585 ENSDARG00000076801 neurog1 (ENSDARG00000056130) polr2g (ENSDARG00000056127) eef1g (ENSDARG00000056119) #22 ENSDARG00000061764 klhl4 (ENSDARG00000016531) ENSDARG00000105441 PCDH11Y (ENSDARG00000098652) ENSDARG00000075666 TSC22D3 (ENSDARG00000105498) ENSDARG00000033501 MID2 (ENSDARG00000034871) nek12 (ENSDARG00000037174) pin4 (ENSDARG00000004527) acsl4a (ENSDARG00000004078) nxt2 (ENSDARG00000061527) psmd10 (ENSDARG00000015628) xiap (ENSDARG00000016143) STAG2 (ENSDARG00000053668) Euteleosteomorpha ANCESTRAL SPECIES 228 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000155437 ENSGT00940000157743 ENSGT00940000153986.b.b ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00970000197172 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT01060000253364 Acanthomorphata ANCESTRAL SPECIES 1 ENSGT00940000161287 ENSGT00940000168541 ENSGT00940000153786.o.a.b ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00940000153786.o.a.b ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 Tiger tail seahorse MODERN SPECIES 332 NDUFS8 (ENSHCOG00000009770) ran (ENSHCOG00000009757) stx3b (ENSHCOG00000009749) KDM2A (ENSHCOG00000009733) ANKRD13D (ENSHCOG00000009723) ENSHCOG00000009686 RNF38 (ENSHCOG00000009663) ENSHCOG00000009611 ENSHCOG00000009601 CHRNA6 (ENSHCOG00000009590) chrnb3b (ENSHCOG00000009560) ENSHCOG00000009546 ENSHCOG00000009531 si:ch211-175m2.5 (ENSHCOG00000009509) polr2g (ENSHCOG00000009499) eef1g (ENSHCOG00000009488) #22 ENSHCOG00000009458 ENSHCOG00000009434 #23 ENSHCOG00000009392 ENSHCOG00000009380 #23 klhl4 (ENSHCOG00000009368) KLHL4 (ENSHCOG00000009355) PCDH11Y (ENSHCOG00000009301) TSC22D3 (ENSHCOG00000009278) ENSHCOG00000009264 MID2 (ENSHCOG00000009252) pmt (ENSHCOG00000009180) ENSHCOG00000009113 SLC16A2 (ENSHCOG00000009101) ENSHCOG00000009090 #9 ENSHCOG00000009081 Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 Eupercaria ANCESTRAL SPECIES 12 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Tetraodontidae ANCESTRAL SPECIES 9 ENSGT00390000009223 ENSGT00940000165522.b ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b Tetraodon MODERN SPECIES TBC1D10C (ENSTNIG00000013135) NDUFS8 (ENSTNIG00000013136) RAN (ENSTNIG00000013137) STX3 (ENSTNIG00000013138) KDM2A (ENSTNIG00000013139) ANKRD13D (ENSTNIG00000013140) ENSTNIG00000013141 ENSTNIG00000013142 ENSTNIG00000013143 CHRNA6 (ENSTNIG00000013144) chrnb3b (ENSTNIG00000013145) chrnb3b (ENSTNIG00000013146) ENSTNIG00000005912 si:ch211-175m2.5 (ENSTNIG00000005911) ENSTNIG00000005910 eef1g (ENSTNIG00000005909) #22 ENSTNIG00000000193 #23 klhl4 (ENSTNIG00000016776) PCDH11Y (ENSTNIG00000016777) TSC22D3 (ENSTNIG00000016778) MID2 (ENSTNIG00000016779) pmt (ENSTNIG00000016780) zgc:152774 (ENSTNIG00000016781) ENSTNIG00000016782 SLC16A2 (ENSTNIG00000016783) ENSTNIG00000016784 pola2 (ENSTNIG00000016785) zdhhc24 (ENSTNIG00000016786) ENSTNIG00000016787 ENSTNIG00000016788 dpf2l (ENSTNIG00000016789) Fugu MODERN SPECIES 5 stx3b (ENSTRUG00000022899) KDM2A (ENSTRUG00000013920) ANKRD13D (ENSTRUG00000014002) ENSTRUG00000022410 ENSTRUG00000030622 ENSTRUG00000014056 ENSTRUG00000032222 ENSTRUG00000021022 CHRNA6 (ENSTRUG00000001158) chrnb3b (ENSTRUG00000001764) ENSTRUG00000021107 ENSTRUG00000002223 si:ch211-175m2.5 (ENSTRUG00000020075) polr2g (ENSTRUG00000002492) ENSTRUG00000027686 eef1g (ENSTRUG00000003022) #22 klhl4 (ENSTRUG00000008161) PCDH11Y (ENSTRUG00000008100) TSC22D3 (ENSTRUG00000007985) MID2 (ENSTRUG00000015153) pmt (ENSTRUG00000015142) ENSTRUG00000015123 ENSTRUG00000031782 f8 (ENSTRUG00000015007) SLC16A2 (ENSTRUG00000014955) ENSTRUG00000021628 #9 ENSTRUG00000029387 ENSTRUG00000020603 pola2 (ENSTRUG00000014846) zdhhc24 (ENSTRUG00000023721) ENSTRUG00000027972 Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Ballan wrasse MODERN SPECIES 97 ENSLBEG00000001802 ENSLBEG00000001634 chrnb3b (ENSLBEG00000001568) ENSLBEG00000001552 ENSLBEG00000001483 polr2g (ENSLBEG00000001458) si:ch211-175m2.5 (ENSLBEG00000001439) eef1g (ENSLBEG00000001378) #22 AHNAK (ENSLBEG00000001301) #23 klhl4 (ENSLBEG00000001251) PCDH11Y (ENSLBEG00000001201) NKD2 (ENSLBEG00000001152) PLEKHG4B (ENSLBEG00000001062) ENSLBEG00000001008 NHLRC1 (ENSLBEG00000000996) ptdss1a (ENSLBEG00000000932) KIF13A (ENSLBEG00000000794) rbm24b (ENSLBEG00000000774) grinab (ENSLBEG00000000682) smpd5 (ENSLBEG00000000634) malsu1 (ENSLBEG00000000603) NPY (ENSLBEG00000000596) pals2a (ENSLBEG00000000577) Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b Gilthead seabream MODERN SPECIES 9 ran (ENSSAUG00010009748) STX3 (ENSSAUG00010009756) KDM2A (ENSSAUG00010009807) ANKRD13D (ENSSAUG00010011475) ENSSAUG00010012128 ENSSAUG00010012132 ENSSAUG00010012135 RNF38 (ENSSAUG00010012142) ENSSAUG00010012320 CHRNA6 (ENSSAUG00010012324) chrnb3b (ENSSAUG00010012330) ENSSAUG00010012397 ENSSAUG00010012401 si:ch211-175m2.5 (ENSSAUG00010012404) polr2g (ENSSAUG00010012407) eef1g (ENSSAUG00010012412) #22 ENSSAUG00010012474 #23 klhl4 (ENSSAUG00010012477) PCDH11Y (ENSSAUG00010012511) TSC22D3 (ENSSAUG00010012514) MID2 (ENSSAUG00010012538) pmt (ENSSAUG00010013497) ENSSAUG00010013499 zgc:152774 (ENSSAUG00010013501) ENSSAUG00010013529 ENSSAUG00010015014 #9 SLC16A2 (ENSSAUG00010015016) ENSSAUG00010015018 ENSSAUG00010015020 pola2 (ENSSAUG00010015056) zdhhc24 (ENSSAUG00010016075) Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b European seabass MODERN SPECIES 12 ran (ENSDLAG00005014927) stx3b (ENSDLAG00005014878) ENSDLAG00005013476 ENSDLAG00005012982 ENSDLAG00005012956 ENSDLAG00005012949 ENSDLAG00005028680 ENSDLAG00005012771 ENSDLAG00005012755 ENSDLAG00005012702 ENSDLAG00005012587 ENSDLAG00005012578 ENSDLAG00005017933 ENSDLAG00005012547 polr2g (ENSDLAG00005012520) eef1g (ENSDLAG00005012193) #22 ENSDLAG00005034766 #23 klhl4 (ENSDLAG00005011810) ENSDLAG00005011791 ENSDLAG00005034468 ENSDLAG00005011021 ENSDLAG00005010951 ENSDLAG00005009926 ENSDLAG00005010207 ENSDLAG00005010163 ENSDLAG00005029197 #9 ENSDLAG00005030854 ENSDLAG00005010063 ENSDLAG00005009997 ENSDLAG00005009987 ENSDLAG00005031492 Large yellow croaker MODERN SPECIES ran (ENSLCRG00005007089) stx3b (ENSLCRG00005007082) ENSLCRG00005007077 ENSLCRG00005006454 ANKRD13D (ENSLCRG00005005647) ENSLCRG00005005635 ENSLCRG00005005633 ENSLCRG00005005630 ENSLCRG00005005613 ENSLCRG00005005612 CHRNA6 (ENSLCRG00005005608) chrnb3b (ENSLCRG00005005605) ENSLCRG00005005600 si:ch211-175m2.5 (ENSLCRG00005005597) polr2g (ENSLCRG00005005594) eef1g (ENSLCRG00005005426) #22 ENSLCRG00005005422 ENSLCRG00005005418 #23 klhl4 (ENSLCRG00005005199) PCDH11Y (ENSLCRG00005005197) TSC22D3 (ENSLCRG00005005193) MID2 (ENSLCRG00005004733) pmt (ENSLCRG00005004706) ENSLCRG00005004704 zgc:152774 (ENSLCRG00005004702) ENSLCRG00005004697 ENSLCRG00005004691 SLC16A2 (ENSLCRG00005004689) ENSLCRG00005004686 #9 ENSLCRG00005004684 ENSLCRG00005004678 Perciformes ANCESTRAL SPECIES 13 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Perciformes_a ANCESTRAL SPECIES 11 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Pike perch MODERN SPECIES 18 stx3b (ENSSLUG00000021132) KDM2A (ENSSLUG00000020445) ANKRD13D (ENSSLUG00000020331) ENSSLUG00000020319 ENSSLUG00000020313 ENSSLUG00000020308 ENSSLUG00000020194 ENSSLUG00000020178 CHRNA6 (ENSSLUG00000020168) chrnb3b (ENSSLUG00000020159) ENSSLUG00000020156 ENSSLUG00000020123 ENSSLUG00000020113 si:ch211-175m2.5 (ENSSLUG00000020107) polr2g (ENSSLUG00000020104) eef1g (ENSSLUG00000019804) #22 ENSSLUG00000019772 ENSSLUG00000019690 #23 klhl4 (ENSSLUG00000019564) ENSSLUG00000019541 PCDH11Y (ENSSLUG00000019527) TSC22D3 (ENSSLUG00000019516) ENSSLUG00000019512 MID2 (ENSSLUG00000018961) ENSSLUG00000018886 zgc:152774 (ENSSLUG00000018875) ENSSLUG00000018730 SLC16A2 (ENSSLUG00000018701) ENSSLUG00000018695 #9 ENSSLUG00000018689 pola2 (ENSSLUG00000018604) Channel bull blenny MODERN SPECIES 1 NDUFS8 (ENSCGOG00000006656) ran (ENSCGOG00000006508) stx3b (ENSCGOG00000006484) KDM2A (ENSCGOG00000005116) ANKRD13D (ENSCGOG00000004326) ENSCGOG00000004273 ENSCGOG00000004270 ENSCGOG00000004263 ENSCGOG00000004131 CHRNA6 (ENSCGOG00000004065) chrnb3b (ENSCGOG00000017465) ENSCGOG00000017462 ENSCGOG00000017453 si:ch211-175m2.5 (ENSCGOG00000017450) polr2g (ENSCGOG00000017432) eef1g (ENSCGOG00000017300) #22 ENSCGOG00000017298 #23 klhl4 (ENSCGOG00000017294) PCDH11Y (ENSCGOG00000017292) TSC22D3 (ENSCGOG00000017284) MID2 (ENSCGOG00000016876) pmt (ENSCGOG00000016826) ENSCGOG00000016819 zgc:152774 (ENSCGOG00000016812) ENSCGOG00000016517 SLC16A2 (ENSCGOG00000016498) ENSCGOG00000016491 #9 ENSCGOG00000016490 ENSCGOG00000016485 pola2 (ENSCGOG00000016282) zdhhc24 (ENSCGOG00000016275) Cottioidei ANCESTRAL SPECIES 9 ENSGT00940000161287 ENSGT00390000003049.b.b ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b ENSGT00940000155070.a.b.a Stickleback MODERN SPECIES 3 TBC1D10C (ENSGACG00000017769) NDUFS8 (ENSGACG00000017764) ran (ENSGACG00000017755) stx3b (ENSGACG00000017743) KDM2A (ENSGACG00000017741) ANKRD13D (ENSGACG00000017740) ENSGACG00000017735 ENSGACG00000017733 ENSGACG00000017728 ENSGACG00000017726 CHRNA6 (ENSGACG00000017723) chrnb3b (ENSGACG00000017720) ENSGACG00000017717 si:ch211-175m2.5 (ENSGACG00000017715) polr2g (ENSGACG00000017706) eef1g (ENSGACG00000017702) #22 ENSGACG00000017697 #23 klhl4 (ENSGACG00000017694) PCDH11Y (ENSGACG00000017692) TSC22D3 (ENSGACG00000017689) MID2 (ENSGACG00000017686) pmt (ENSGACG00000017681) zgc:152774 (ENSGACG00000017677) ENSGACG00000017676 ENSGACG00000017671 ENSGACG00000017669 SLC16A2 (ENSGACG00000017666) ENSGACG00000017664 #9 pola2 (ENSGACG00000017643) zdhhc24 (ENSGACG00000017642) ENSGACG00000017637 Lumpfish MODERN SPECIES 1 rad9a (ENSCLMG00005010129) ENSCLMG00005010161 NDUFS8 (ENSCLMG00005010165) ran (ENSCLMG00005010355) stx3b (ENSCLMG00005010497) KDM2A (ENSCLMG00005010522) ANKRD13D (ENSCLMG00005013859) ENSCLMG00005014206 ENSCLMG00005014207 ENSCLMG00005014208 CHRNA6 (ENSCLMG00005014229) chrnb3b (ENSCLMG00005014231) ENSCLMG00005014233 si:ch211-175m2.5 (ENSCLMG00005014253) polr2g (ENSCLMG00005014256) eef1g (ENSCLMG00005014258) #22 klhl4 (ENSCLMG00005014277) PCDH11Y (ENSCLMG00005014282) TSC22D3 (ENSCLMG00005014285) MID2 (ENSCLMG00005004301) pmt (ENSCLMG00005004758) zgc:152774 (ENSCLMG00005004772) ENSCLMG00005004789 SLC16A2 (ENSCLMG00005004836) ENSCLMG00005005043 #9 ENSCLMG00005005045 pola2 (ENSCLMG00005005046) zdhhc24 (ENSCLMG00005005094) ENSCLMG00005005096 ENSCLMG00005005113 ENSCLMG00005005121 Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 Anabantaria ANCESTRAL SPECIES 15 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394.h.a ENSGT00390000009327 ENSGT00390000016784 Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000175287 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394.h.a ENSGT00390000009327 ENSGT00390000016784 Climbing perch MODERN SPECIES 1 ran (ENSATEG00000013025) stx3b (ENSATEG00000013031) ENSATEG00000013040 ENSATEG00000013063 ENSATEG00000026687 ENSATEG00000013148 ENSATEG00000013169 ENSATEG00000013179 ENSATEG00000013215 ENSATEG00000013233 ENSATEG00000013262 ENSATEG00000025995 ENSATEG00000013288 ENSATEG00000013334 polr2g (ENSATEG00000013382) eef1g (ENSATEG00000013408) #22 ENSATEG00000029134 ENSATEG00000028726 #23 klhl4 (ENSATEG00000013438) ENSATEG00000026874 ENSATEG00000013485 ENSATEG00000013507 ENSATEG00000013538 ENSATEG00000013585 ENSATEG00000013628 ENSATEG00000028040 ENSATEG00000013662 ENSATEG00000013685 ENSATEG00000013695 #9 ENSATEG00000026898 ENSATEG00000013716 Siamese fighting fish MODERN SPECIES 1 ENSBSLG00000008637 NDUFS8 (ENSBSLG00000008600) ran (ENSBSLG00000008632) stx3b (ENSBSLG00000008194) KDM2A (ENSBSLG00000007492) ANKRD13D (ENSBSLG00000006794) ENSBSLG00000006346 ENSBSLG00000006292 ENSBSLG00000005861 ENSBSLG00000005854 ENSBSLG00000005819 chrnb3b (ENSBSLG00000005783) ENSBSLG00000005770 si:ch211-175m2.5 (ENSBSLG00000005765) polr2g (ENSBSLG00000005250) eef1g (ENSBSLG00000005645) #22 AHNAK (ENSBSLG00000005211) #23 klhl4 (ENSBSLG00000005010) PCDH11Y (ENSBSLG00000004915) TSC22D3 (ENSBSLG00000004762) MID2 (ENSBSLG00000004072) ENSBSLG00000003960 ENSBSLG00000003759 SLC16A2 (ENSBSLG00000002940) ENSBSLG00000002938 #9 ENSBSLG00000002934 ENSBSLG00000002925 pola2 (ENSBSLG00000002678) zdhhc24 (ENSBSLG00000002610) ENSBSLG00000002588 dpf2l (ENSBSLG00000002549) Zig-zag eel MODERN SPECIES 1 ran (ENSMAMG00000026961) stx3b (ENSMAMG00000001629) ENSMAMG00000001539 ENSMAMG00000001480 ENSMAMG00000001469 ENSMAMG00000001439 ENSMAMG00000026189 ENSMAMG00000001375 ENSMAMG00000001352 ENSMAMG00000001321 ENSMAMG00000001292 ENSMAMG00000001279 ENSMAMG00000001224 ENSMAMG00000001171 polr2g (ENSMAMG00000001188) eef1g (ENSMAMG00000001122) #22 ENSMAMG00000001103 #23 klhl4 (ENSMAMG00000001041) ENSMAMG00000001007 ENSMAMG00000028641 ENSMAMG00000000843 ENSMAMG00000000769 ENSMAMG00000000737 ENSMAMG00000000694 ENSMAMG00000000676 ENSMAMG00000028704 #9 ENSMAMG00000000643 ENSMAMG00000000612 ENSMAMG00000000516 ENSMAMG00000000502 ENSMAMG00000000443 Carangaria ANCESTRAL SPECIES 15 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Carangaria_A ANCESTRAL SPECIES 17 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Seriola ANCESTRAL SPECIES 32 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Greater amberjack MODERN SPECIES 113 ENSSDUG00000014809 ran (ENSSDUG00000014827) stx3b (ENSSDUG00000014868) KDM2A (ENSSDUG00000014916) ANKRD13D (ENSSDUG00000014983) ENSSDUG00000015014 ENSSDUG00000015026 ENSSDUG00000015039 ENSSDUG00000015081 CHRNA6 (ENSSDUG00000015090) chrnb3b (ENSSDUG00000015100) ENSSDUG00000015113 ENSSDUG00000015125 si:ch211-175m2.5 (ENSSDUG00000015150) polr2g (ENSSDUG00000015179) eef1g (ENSSDUG00000015202) #22 ENSSDUG00000015231 ENSSDUG00000015292 #23 klhl4 (ENSSDUG00000015744) PCDH11Y (ENSSDUG00000015789) TSC22D3 (ENSSDUG00000015815) MID2 (ENSSDUG00000015849) ENSSDUG00000015955 pmt (ENSSDUG00000015975) ENSSDUG00000016001 ENSSDUG00000016023 SLC16A2 (ENSSDUG00000016058) ENSSDUG00000016072 #9 ENSSDUG00000016075 ENSSDUG00000016087 pola2 (ENSSDUG00000016133) Yellowtail amberjack MODERN SPECIES 2961 NDUFS8 (ENSSLDG00000001328) ran (ENSSLDG00000001372) stx3b (ENSSLDG00000001394) KDM2A (ENSSLDG00000001472) ANKRD13D (ENSSLDG00000001491) ENSSLDG00000001507 ENSSLDG00000001521 ENSSLDG00000001570 ENSSLDG00000001622 CHRNA6 (ENSSLDG00000001647) chrnb3b (ENSSLDG00000001703) ENSSLDG00000001734 ENSSLDG00000001749 si:ch211-175m2.5 (ENSSLDG00000001798) polr2g (ENSSLDG00000001822) eef1g (ENSSLDG00000001834) #22 ENSSLDG00000001876 #23 klhl4 (ENSSLDG00000001955) ENSSLDG00000002005 PCDH11Y (ENSSLDG00000002042) Barramundi perch MODERN SPECIES 39 NDUFS8 (ENSLCAG00010011247) ran (ENSLCAG00010011295) stx3b (ENSLCAG00010011318) KDM2A (ENSLCAG00010011367) ANKRD13D (ENSLCAG00010011505) ENSLCAG00010011510 ENSLCAG00010011514 ENSLCAG00010011515 ENSLCAG00010011521 CHRNA6 (ENSLCAG00010011528) chrnb3b (ENSLCAG00010011540) ENSLCAG00010011547 ENSLCAG00010011549 si:ch211-175m2.5 (ENSLCAG00010011552) polr2g (ENSLCAG00010011557) eef1g (ENSLCAG00010011574) #22 ENSLCAG00010011614 ENSLCAG00010011620 #23 ENSLCAG00010011629 #23 klhl4 (ENSLCAG00010011639) PCDH11Y (ENSLCAG00010011678) ENSLCAG00010011683 TSC22D3 (ENSLCAG00010011686) MID2 (ENSLCAG00010011695) ENSLCAG00010011709 Pleuronectoidei ANCESTRAL SPECIES 19 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00940000165812 ENSGT00530000063841.a ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b Tongue sole MODERN SPECIES 6 FAM53C (ENSCSEG00000011662) ctbp1 (ENSCSEG00000011675) spon2a (ENSCSEG00000011706) ENSCSEG00000011722 reep2 (ENSCSEG00000011819) ENSCSEG00000011847 ENSCSEG00000011855 RNF38 (ENSCSEG00000011864) ENSCSEG00000011885 ENSCSEG00000011902 ENSCSEG00000011943 chrnb3b (ENSCSEG00000011925) ENSCSEG00000011952 si:ch211-175m2.5 (ENSCSEG00000011974) polr2g (ENSCSEG00000011991) eef1g (ENSCSEG00000012081) #22 ENSCSEG00000012094 ENSCSEG00000012101 #23 klhl4 (ENSCSEG00000012115) ENSCSEG00000012144 #23 SLC26A2 (ENSCSEG00000012154) pde6a (ENSCSEG00000012160) ENSCSEG00000012195 ARHGEF37 (ENSCSEG00000012208) ELP1 (ENSCSEG00000012230) CPXM1 (ENSCSEG00000012282) SMU1 (ENSCSEG00000012301) CPLX1 (ENSCSEG00000012329) PCGF3 (ENSCSEG00000012338) SLC49A3 (ENSCSEG00000012355) NCBP1 (ENSCSEG00000012377) Turbot MODERN SPECIES 4 rad9a (ENSSMAG00000019630) ENSSMAG00000019639 ENSSMAG00000019658 ran (ENSSMAG00000000887) ENSSMAG00000000897 ENSSMAG00000000953 ENSSMAG00000000962 ENSSMAG00000000979 ENSSMAG00000001032 ENSSMAG00000001048 ENSSMAG00000001072 ENSSMAG00000001099 ENSSMAG00000001123 ENSSMAG00000001143 ENSSMAG00000025037 eef1g (ENSSMAG00000001235) #22 ENSSMAG00000001273 ENSSMAG00000001298 #23 klhl4 (ENSSMAG00000018568) ENSSMAG00000018523 ENSSMAG00000035355 ENSSMAG00000018444 ENSSMAG00000018401 ENSSMAG00000018370 ENSSMAG00000026631 ENSSMAG00000018359 ENSSMAG00000018342 ENSSMAG00000018339 #9 ENSSMAG00000032165 ENSSMAG00000018291 ENSSMAG00000018289 Ovalentaria ANCESTRAL SPECIES 15 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00940000163155.h ENSGT00390000009327 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b Mangrove rivulus MODERN SPECIES 109 ENSKMAG00000011578 ran (ENSKMAG00000011546) stx3b (ENSKMAG00000011507) KDM2A (ENSKMAG00000011453) ANKRD13D (ENSKMAG00000011404) ENSKMAG00000011372 ENSKMAG00000011357 ENSKMAG00000011315 ENSKMAG00000011277 CHRNA6 (ENSKMAG00000011228) chrnb3b (ENSKMAG00000011182) ENSKMAG00000011161 ENSKMAG00000011142 si:ch211-175m2.5 (ENSKMAG00000011126) polr2g (ENSKMAG00000011056) eef1g (ENSKMAG00000011008) #22 ENSKMAG00000010989 ENSKMAG00000010981 #23 klhl4 (ENSKMAG00000010944) PCDH11Y (ENSKMAG00000010896) ENSKMAG00000010817 ENSKMAG00000010783 Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015003703 ENSNFUG00015003705 spo11 (ENSNFUG00015003710) ENSNFUG00015003715 ZCCHC7 (ENSNFUG00015003718) RNF38 (ENSNFUG00015003722) ENSNFUG00015003727 ENSNFUG00015003729 CHRNA6 (ENSNFUG00015003862) ENSNFUG00015003867 chrnb3b (ENSNFUG00015003873) ENSNFUG00015003876 ENSNFUG00015003886 BX470131.2 (ENSNFUG00015003918) POLR2GL (ENSNFUG00015003921) eef1g (ENSNFUG00015003934) #22 ENSNFUG00015003973 KLHL4 (ENSNFUG00015003984) ENSNFUG00015003997 PCDH11X (ENSNFUG00015003999) ENSNFUG00015004003 TSC22D3 (ENSNFUG00015004007) ENSNFUG00015004009 ENSNFUG00015004013 ENSNFUG00015004018 MID2 (ENSNFUG00015004039) ENSNFUG00015004087 ENSNFUG00015004088 ENSNFUG00015004090 pmt (ENSNFUG00015004106) ENSNFUG00015004135 Cyprinodontoidei ANCESTRAL SPECIES 19 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00940000165845.d ENSGT00390000016784 NAME_4 ANCESTRAL SPECIES 34 ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00940000169057 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00940000165845.d ENSGT00940000163155.h.a Sheepshead minnow MODERN SPECIES 242 NDUFS8 (ENSCVAG00000020561) ran (ENSCVAG00000020568) stx3b (ENSCVAG00000020610) ENSCVAG00000020722 ANKRD13D (ENSCVAG00000020805) ENSCVAG00000020818 ENSCVAG00000000537 ENSCVAG00000020896 ENSCVAG00000020917 CHRNA6 (ENSCVAG00000020981) chrnb3b (ENSCVAG00000021014) ENSCVAG00000021023 ENSCVAG00000021047 si:ch211-175m2.5 (ENSCVAG00000021080) polr2g (ENSCVAG00000021090) eef1g (ENSCVAG00000021121) #22 ENSCVAG00000021131 ENSCVAG00000021217 #23 klhl4 (ENSCVAG00000021280) PCDH11Y (ENSCVAG00000021320) Mummichog MODERN SPECIES 2228 ENSFHEG00000003093 si:ch211-175m2.5 (ENSFHEG00000003080) polr2g (ENSFHEG00000003053) eef1g (ENSFHEG00000003042) #22 ENSFHEG00000003031 ENSFHEG00000003028 #23 klhl4 (ENSFHEG00000003015) PCDH11Y (ENSFHEG00000002999) ENSFHEG00000002991 TSC22D3 (ENSFHEG00000002983) ENSFHEG00000002956 MID2 (ENSFHEG00000002944) ENSFHEG00000002904 pmt (ENSFHEG00000002901) ENSFHEG00000002886 ENSFHEG00000002872 SLC16A2 (ENSFHEG00000002812) ENSFHEG00000002804 #9 ENSFHEG00000002799 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00940000161287 ENSGT00390000003049.b.b ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00940000165845.d ENSGT00390000016784 Poecilia ANCESTRAL SPECIES 34 ENSGT00940000161287 ENSGT00390000003049.b.b ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h.b ENSGT00390000009327 ENSGT00940000165845.d ENSGT00940000170012.a NAME_6 ANCESTRAL SPECIES 28 ENSGT00940000161287 ENSGT00390000003049.b.b ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b.c ENSGT01030000234627.a.b.a.a.b.b.d ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h.b ENSGT00390000009327 ENSGT00940000165845.d ENSGT00940000161394 ENSGT00390000016784 Amazon molly MODERN SPECIES 433 ran (ENSPFOG00000009552) stx3b (ENSPFOG00000009642) stx3b (ENSPFOG00000009724) KDM2A (ENSPFOG00000009817) ANKRD13D (ENSPFOG00000009971) ENSPFOG00000010076 ENSPFOG00000022164 ENSPFOG00000022751 ENSPFOG00000010184 ENSPFOG00000021819 ENSPFOG00000010315 chrnb3b (ENSPFOG00000010451) ENSPFOG00000010497 si:ch211-175m2.5 (ENSPFOG00000010611) polr2g (ENSPFOG00000024274) eef1g (ENSPFOG00000010639) #22 ENSPFOG00000010722 Sailfin molly MODERN SPECIES ENSPLAG00000022355 ANKRD13D (ENSPLAG00000022366) ENSPLAG00000022372 ENSPLAG00000022407 ENSPLAG00000022434 ENSPLAG00000022458 chrnb3b (ENSPLAG00000022481) ENSPLAG00000022505 si:ch211-175m2.5 (ENSPLAG00000022530) polr2g (ENSPLAG00000022848) eef1g (ENSPLAG00000022878) #22 ENSPLAG00000022893 ENSPLAG00000022922 #23 klhl4 (ENSPLAG00000022944) PCDH11Y (ENSPLAG00000022962) TSC22D3 (ENSPLAG00000022990) MID2 (ENSPLAG00000023030) pmt (ENSPLAG00000023065) ENSPLAG00000023071 ENSPLAG00000023079 ENSPLAG00000023086 SLC16A2 (ENSPLAG00000023096) ENSPLAG00000023108 #9 ENSPLAG00000023109 ENSPLAG00000023122 ENSPLAG00000023164 Guppy MODERN SPECIES 440 stx3b (ENSPREG00000017236) ENSPREG00000017200 ENSPREG00000017120 ANKRD13D (ENSPREG00000017062) ENSPREG00000017032 ENSPREG00000017003 ENSPREG00000016964 ENSPREG00000016927 ENSPREG00000016876 ENSPREG00000016849 chrnb3b (ENSPREG00000016788) ENSPREG00000016769 ENSPREG00000016730 si:ch211-175m2.5 (ENSPREG00000016660) polr2g (ENSPREG00000016633) eef1g (ENSPREG00000016570) #22 ENSPREG00000016558 ENSPREG00000016539 #23 klhl4 (ENSPREG00000016500) PCDH11Y (ENSPREG00000016422) TSC22D3 (ENSPREG00000016394) MID2 (ENSPREG00000016327) pmt (ENSPREG00000016278) ENSPREG00000016244 ENSPREG00000016212 SLC16A2 (ENSPREG00000016201) ENSPREG00000016188 ENSPREG00000016165 ENSPREG00000016148 ENSPREG00000016125 pola2 (ENSPREG00000016051) Platyfish MODERN SPECIES 15 ran (ENSXMAG00000009922) stx3b (ENSXMAG00000025903) KDM2A (ENSXMAG00000024963) ANKRD13D (ENSXMAG00000009988) ENSXMAG00000010004 ENSXMAG00000026374 ENSXMAG00000027387 ENSXMAG00000010008 ENSXMAG00000010018 CHRNA6 (ENSXMAG00000010024) chrnb3b (ENSXMAG00000010036) ENSXMAG00000021034 ENSXMAG00000010045 si:ch211-175m2.5 (ENSXMAG00000010061) polr2g (ENSXMAG00000010063) eef1g (ENSXMAG00000010070) #22 ENSXMAG00000022203 #23 klhl4 (ENSXMAG00000009652) PCDH11Y (ENSXMAG00000026364) ENSXMAG00000029824 ENSXMAG00000028001 ENSXMAG00000027426 TSC22D3 (ENSXMAG00000024707) MID2 (ENSXMAG00000022296) pmt (ENSXMAG00000025348) zgc:152774 (ENSXMAG00000009722) ENSXMAG00000009727 SLC16A2 (ENSXMAG00000009742) ENSXMAG00000020185 #9 ENSXMAG00000026253 ENSXMAG00000021178 Oryzias ANCESTRAL SPECIES 17 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h.a ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 Oryzias_b ANCESTRAL SPECIES 33 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h.a ENSGT00940000161394 ENSGT00940000163155.h.b ENSGT00390000009327 Indian medaka MODERN SPECIES 16 ran (ENSOMEG00000020731) stx3b (ENSOMEG00000020669) KDM2A (ENSOMEG00000020569) ANKRD13D (ENSOMEG00000020479) ENSOMEG00000020412 ENSOMEG00000020397 ENSOMEG00000000532 ENSOMEG00000020368 ENSOMEG00000020304 CHRNA6 (ENSOMEG00000020264) chrnb3b (ENSOMEG00000020215) ENSOMEG00000020173 ENSOMEG00000020151 si:ch211-175m2.5 (ENSOMEG00000020121) polr2g (ENSOMEG00000020086) eef1g (ENSOMEG00000020060) #22 ENSOMEG00000020037 ENSOMEG00000020027 #23 klhl4 (ENSOMEG00000020007) PCDH11Y (ENSOMEG00000019973) TSC22D3 (ENSOMEG00000019945) MID2 (ENSOMEG00000019908) pmt (ENSOMEG00000019802) zgc:152774 (ENSOMEG00000019746) ENSOMEG00000019663 SLC16A2 (ENSOMEG00000019612) ENSOMEG00000019589 ENSOMEG00000019548 ENSOMEG00000019536 ENSOMEG00000019516 pola2 (ENSOMEG00000019488) Javanese ricefish MODERN SPECIES 1 ran (ENSOJAG00000006836) stx3b (ENSOJAG00000007099) KDM2A (ENSOJAG00000007358) ANKRD13D (ENSOJAG00000008079) ENSOJAG00000008876 ENSOJAG00000008898 ENSOJAG00000008933 ENSOJAG00000008960 ENSOJAG00000009014 CHRNA6 (ENSOJAG00000009035) chrnb3b (ENSOJAG00000009134) ENSOJAG00000009215 ENSOJAG00000009228 si:ch211-175m2.5 (ENSOJAG00000009283) polr2g (ENSOJAG00000009296) eef1g (ENSOJAG00000009317) #22 ENSOJAG00000009385 ENSOJAG00000009428 #23 klhl4 (ENSOJAG00000009860) PCDH11Y (ENSOJAG00000010233) TSC22D3 (ENSOJAG00000010257) MID2 (ENSOJAG00000010306) pmt (ENSOJAG00000010477) ENSOJAG00000010583 ENSOJAG00000010638 SLC16A2 (ENSOJAG00000010958) ENSOJAG00000010968 #9 ENSOJAG00000010982 ENSOJAG00000010991 pola2 (ENSOJAG00000011043) zdhhc24 (ENSOJAG00000011792) Oryzias_a ANCESTRAL SPECIES 19 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h.a ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Japanese Medaka HdrR MODERN SPECIES 1 ENSORLG00000025085 stx3b (ENSORLG00000003426) ENSORLG00000003398 ANKRD13D (ENSORLG00000003374) ENSORLG00000003311 ENSORLG00000003300 ENSORLG00000022305 ENSORLG00000003296 ENSORLG00000003262 CHRNA6 (ENSORLG00000003243) chrnb3b (ENSORLG00000003226) ENSORLG00000028673 ENSORLG00000003203 si:ch211-175m2.5 (ENSORLG00000003159) polr2g (ENSORLG00000003154) eef1g (ENSORLG00000003130) #22 AHNAK (ENSORLG00000028884) #23 klhl4 (ENSORLG00000003079) PCDH11Y (ENSORLG00000003051) ENSORLG00000030496 ENSORLG00000021952 TSC22D3 (ENSORLG00000025379) MID2 (ENSORLG00000002994) pmt (ENSORLG00000002980) zgc:152774 (ENSORLG00000002973) ENSORLG00000002966 ENSORLG00000002925 ENSORLG00000002917 #9 ENSORLG00000022743 ENSORLG00000002911 ENSORLG00000024657 Chinese medaka MODERN SPECIES 771 ENSOSIG00000015105 NDUFS8 (ENSOSIG00000015106) ran (ENSOSIG00000015108) stx3b (ENSOSIG00000015111) KDM2A (ENSOSIG00000015137) ANKRD13D (ENSOSIG00000016525) ENSOSIG00000017438 ENSOSIG00000017441 ENSOSIG00000017445 CHRNA6 (ENSOSIG00000017449) chrnb3b (ENSOSIG00000017471) ENSOSIG00000017477 ENSOSIG00000017487 si:ch211-175m2.5 (ENSOSIG00000017494) polr2g (ENSOSIG00000017500) eef1g (ENSOSIG00000017510) #22 ENSOSIG00000017595 klhl4 (ENSOSIG00000017612) PCDH11Y (ENSOSIG00000017684) TSC22D3 (ENSOSIG00000017690) MID2 (ENSOSIG00000017718) pmt (ENSOSIG00000017987) ENSOSIG00000018002 ENSOSIG00000018023 SLC16A2 (ENSOSIG00000018048) ENSOSIG00000018049 #9 ENSOSIG00000018052 pola2 (ENSOSIG00000018083) zdhhc24 (ENSOSIG00000018385) ENSOSIG00000018387 dpf2l (ENSOSIG00000018389) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00940000163155.h ENSGT00390000009327 Cichlidae ANCESTRAL SPECIES 8 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00940000163155.h ENSGT00390000009327 Pseudocrenilabrinae ANCESTRAL SPECIES 17 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00940000163155.h ENSGT00390000009327 Pseudocrenilabrinae_A ANCESTRAL SPECIES 24 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000160294 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00940000163155.h ENSGT00390000009327 Haplochromini ANCESTRAL SPECIES 14 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000170012.a ENSGT00940000161394 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h ENSGT00390000009327 Burton s mouthbrooder MODERN SPECIES 273 NDUFS8 (ENSHBUG00000010872) ran (ENSHBUG00000010882) stx3b (ENSHBUG00000010925) KDM2A (ENSHBUG00000011047) ANKRD13D (ENSHBUG00000011074) ENSHBUG00000011091 ENSHBUG00000011096 ENSHBUG00000011127 ENSHBUG00000011152 CHRNA6 (ENSHBUG00000011159) chrnb3b (ENSHBUG00000011181) ENSHBUG00000011189 ENSHBUG00000011224 si:ch211-175m2.5 (ENSHBUG00000011287) polr2g (ENSHBUG00000011421) eef1g (ENSHBUG00000011457) #22 ENSHBUG00000011477 ENSHBUG00000011502 #23 klhl4 (ENSHBUG00000011532) PCDH11Y (ENSHBUG00000011581) TSC22D3 (ENSHBUG00000011618) MID2 (ENSHBUG00000011689) pmt (ENSHBUG00000000319) ENSHBUG00000011750 ENSHBUG00000011768 SLC16A2 (ENSHBUG00000011774) ENSHBUG00000011781 ENSHBUG00000011790 ENSHBUG00000011804 ENSHBUG00000011809 #9 ENSHBUG00000011822 Haplochromini_A ANCESTRAL SPECIES 13 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000165200 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000170012.a ENSGT00940000161394 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h ENSGT00390000009327 P. nyererei MODERN SPECIES 303 NDUFS8 (ENSPNYG00000016796) ran (ENSPNYG00000016770) stx3b (ENSPNYG00000016620) KDM2A (ENSPNYG00000016466) ANKRD13D (ENSPNYG00000016384) ENSPNYG00000016354 ENSPNYG00000016343 ENSPNYG00000016294 ENSPNYG00000016266 CHRNA6 (ENSPNYG00000016236) chrnb3b (ENSPNYG00000016218) ENSPNYG00000016201 ENSPNYG00000016173 si:ch211-175m2.5 (ENSPNYG00000016152) polr2g (ENSPNYG00000016136) eef1g (ENSPNYG00000016103) #22 ENSPNYG00000016074 #23 klhl4 (ENSPNYG00000016050) PCDH11Y (ENSPNYG00000016030) TSC22D3 (ENSPNYG00000016006) MID2 (ENSPNYG00000015939) pmt (ENSPNYG00000015885) ENSPNYG00000015864 ENSPNYG00000015793 SLC16A2 (ENSPNYG00000015773) ENSPNYG00000015747 ENSPNYG00000015734 ENSPNYG00000015721 ENSPNYG00000015710 #9 pola2 (ENSPNYG00000015670) zdhhc24 (ENSPNYG00000015654) Haplochromini_B ANCESTRAL SPECIES 7 ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000154902 #23 ENSGT00940000165200 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000170012.a ENSGT00940000161394 ENSGT00940000162696.c.a #9 ENSGT00940000163155.h ENSGT00390000009327 Zebra mbuna MODERN SPECIES 1102 NDUFS8 (ENSMZEG00005003291) ran (ENSMZEG00005003327) stx3b (ENSMZEG00005003335) KDM2A (ENSMZEG00005003367) ANKRD13D (ENSMZEG00005003470) ENSMZEG00005003481 ENSMZEG00005003490 ENSMZEG00005003496 ENSMZEG00005003506 CHRNA6 (ENSMZEG00005003523) chrnb3b (ENSMZEG00005003534) ENSMZEG00005003563 ENSMZEG00005003571 si:ch211-175m2.5 (ENSMZEG00005003605) polr2g (ENSMZEG00005003618) eef1g (ENSMZEG00005003633) #22 AHNAK (ENSMZEG00005003667) #23 klhl4 (ENSMZEG00005003715) PCDH11Y (ENSMZEG00005003743) TSC22D3 (ENSMZEG00005003795) MID2 (ENSMZEG00005003821) pmt (ENSMZEG00005003864) ENSMZEG00005003925 ENSMZEG00005003952 SLC16A2 (ENSMZEG00005003971) ENSMZEG00005003988 ENSMZEG00005004005 ENSMZEG00005004017 #9 ENSMZEG00005004028 pola2 (ENSMZEG00005004050) zdhhc24 (ENSMZEG00005004118) Eastern happy MODERN SPECIES 11 ran (ENSACLG00000014076) stx3b (ENSACLG00000014113) KDM2A (ENSACLG00000014206) ANKRD13D (ENSACLG00000014343) ENSACLG00000014377 ENSACLG00000014397 ENSACLG00000014411 ENSACLG00000014428 ENSACLG00000014442 CHRNA6 (ENSACLG00000014565) chrnb3b (ENSACLG00000014581) ENSACLG00000014629 ENSACLG00000014656 si:ch211-175m2.5 (ENSACLG00000014737) polr2g (ENSACLG00000014753) eef1g (ENSACLG00000014785) #22 ENSACLG00000014847 klhl4 (ENSACLG00000014863) PCDH11Y (ENSACLG00000014979) ENSACLG00000015044 TSC22D3 (ENSACLG00000015118) MID2 (ENSACLG00000015135) pmt (ENSACLG00000015341) ENSACLG00000015386 ENSACLG00000015412 SLC16A2 (ENSACLG00000015471) ENSACLG00000015484 ENSACLG00000015494 ENSACLG00000015509 #9 ENSACLG00000015524 ENSACLG00000015541 Lyretail cichlid MODERN SPECIES 292 NDUFS8 (ENSNBRG00000004697) ran (ENSNBRG00000004675) stx3b (ENSNBRG00000004369) KDM2A (ENSNBRG00000004245) ANKRD13D (ENSNBRG00000004170) ENSNBRG00000004156 ENSNBRG00000004135 ENSNBRG00000004100 ENSNBRG00000004073 CHRNA6 (ENSNBRG00000004042) chrnb3b (ENSNBRG00000004023) ENSNBRG00000004008 ENSNBRG00000003966 si:ch211-175m2.5 (ENSNBRG00000003961) polr2g (ENSNBRG00000003949) eef1g (ENSNBRG00000003913) #22 ENSNBRG00000003878 #23 klhl4 (ENSNBRG00000003832) PCDH11Y (ENSNBRG00000003796) TSC22D3 (ENSNBRG00000003772) MID2 (ENSNBRG00000003721) pmt (ENSNBRG00000003675) ENSNBRG00000003636 ENSNBRG00000003623 ENSNBRG00000003398 SLC16A2 (ENSNBRG00000003367) ENSNBRG00000003355 #9 ENSNBRG00000003351 ENSNBRG00000003329 ENSNBRG00000003310 #9 pola2 (ENSNBRG00000003179) Nile tilapia MODERN SPECIES 11 NDUFS8 (ENSONIG00000038995) ran (ENSONIG00000005139) stx3b (ENSONIG00000005143) KDM2A (ENSONIG00000005149) ANKRD13D (ENSONIG00000005155) ENSONIG00000029875 ENSONIG00000029373 ENSONIG00000005162 ENSONIG00000005165 CHRNA6 (ENSONIG00000005170) chrnb3b (ENSONIG00000005174) ENSONIG00000037063 ENSONIG00000005176 si:ch211-175m2.5 (ENSONIG00000042517) polr2g (ENSONIG00000005183) eef1g (ENSONIG00000005190) #22 AHNAK (ENSONIG00000032948) #23 klhl4 (ENSONIG00000005202) PCDH11Y (ENSONIG00000005209) ENSONIG00000027813 TSC22D3 (ENSONIG00000031070) MID2 (ENSONIG00000005217) pmt (ENSONIG00000005219) ENSONIG00000005225 ENSONIG00000005228 SLC16A2 (ENSONIG00000005239) ENSONIG00000032887 #9 ENSONIG00000005246 ENSONIG00000005248 ENSONIG00000037869 pola2 (ENSONIG00000005250) Midas cichlid MODERN SPECIES 130 ENSACIG00000006693 ran (ENSACIG00000006702) STX3 (ENSACIG00000006739) KDM2A (ENSACIG00000006916) ANKRD13D (ENSACIG00000006981) ENSACIG00000007025 ENSACIG00000007037 ENSACIG00000007109 ENSACIG00000007134 CHRNA6 (ENSACIG00000007157) chrnb3b (ENSACIG00000007186) ENSACIG00000007209 ENSACIG00000007217 si:ch211-175m2.5 (ENSACIG00000007238) polr2g (ENSACIG00000007252) eef1g (ENSACIG00000007271) #22 ENSACIG00000007301 ENSACIG00000007316 #23 Pomacentridae ANCESTRAL SPECIES 4 ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000178480 ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT01030000234788 ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590 ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b Pomacentridae_A ANCESTRAL SPECIES 20 ENSGT00390000003049.b.b ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590.e ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000009327 ENSGT00390000016784 ENSGT00940000164006 Amphiprion ANCESTRAL SPECIES 17 ENSGT00390000003049.b.b ENSGT00940000153786.p ENSGT01030000234627.a.b.a.a.b.b ENSGT00940000155484.a ENSGT00950000182928.A.a.b.b ENSGT00530000063841.a ENSGT00940000165812 ENSGT00950000183041.B.h ENSGT00940000156228.o ENSGT00940000158417.a ENSGT00940000158062.f.b ENSGT00940000156892.a ENSGT00940000154617.A.a.b ENSGT00390000015138 ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00940000159818 ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00940000166590.e ENSGT00940000157994 ENSGT00940000159450 ENSGT00940000162696.c.a #9 ENSGT00940000161394 ENSGT00390000016784 ENSGT00940000164006 ENSGT01030000234532.A.a.a.a.a.b Clown anemonefish MODERN SPECIES 2157 chrnb3b (ENSAOCG00000002265) ENSAOCG00000013545 si:ch211-175m2.5 (ENSAOCG00000013587) polr2g (ENSAOCG00000013628) eef1g (ENSAOCG00000000857) #22 ENSAOCG00000013684 Orange clownfish MODERN SPECIES 4 NDUFS8 (ENSAPEG00000011737) ran (ENSAPEG00000011729) stx3b (ENSAPEG00000011668) KDM2A (ENSAPEG00000011558) ANKRD13D (ENSAPEG00000011535) ENSAPEG00000011517 ENSAPEG00000011485 ENSAPEG00000011471 ENSAPEG00000011426 ENSAPEG00000011394 CHRNA6 (ENSAPEG00000011360) chrnb3b (ENSAPEG00000011326) ENSAPEG00000011275 si:ch211-175m2.5 (ENSAPEG00000011239) polr2g (ENSAPEG00000011229) eef1g (ENSAPEG00000011179) #22 ENSAPEG00000011155 ENSAPEG00000011114 #23 klhl4 (ENSAPEG00000011066) PCDH11Y (ENSAPEG00000011028) TSC22D3 (ENSAPEG00000010968) MID2 (ENSAPEG00000010910) pmt (ENSAPEG00000010832) ENSAPEG00000010809 ENSAPEG00000010803 ENSAPEG00000010787 SLC16A2 (ENSAPEG00000010742) ENSAPEG00000010733 #9 ENSAPEG00000010722 pola2 (ENSAPEG00000010708) zdhhc24 (ENSAPEG00000010700) Spiny chromis MODERN SPECIES 2352 ENSAPOG00000010885 si:ch211-175m2.5 (ENSAPOG00000010918) polr2g (ENSAPOG00000010949) eef1g (ENSAPOG00000011000) #22 Bicolor damselfish MODERN SPECIES 557 ran (ENSSPAG00000015732) stx3b (ENSSPAG00000015694) KDM2A (ENSSPAG00000015608) ANKRD13D (ENSSPAG00000015539) ENSSPAG00000015521 ENSSPAG00000015505 ENSSPAG00000015493 ENSSPAG00000015456 ENSSPAG00000015436 CHRNA6 (ENSSPAG00000015383) chrnb3b (ENSSPAG00000015357) ENSSPAG00000015343 ENSSPAG00000015320 si:ch211-175m2.5 (ENSSPAG00000015293) polr2g (ENSSPAG00000015276) eef1g (ENSSPAG00000015237) #22 ENSSPAG00000015200 Pinecone sodierfish MODERN SPECIES 1 stx3b (ENSMMDG00005009100) KDM2A (ENSMMDG00005006544) ENSMMDG00005006509 ANKRD13D (ENSMMDG00005003875) ENSMMDG00005003784 ENSMMDG00005003782 ENSMMDG00005003777 ENSMMDG00005003771 ENSMMDG00005003734 CHRNA6 (ENSMMDG00005003717) chrnb3b (ENSMMDG00005003673) ENSMMDG00005003660 ENSMMDG00005003637 si:ch211-175m2.5 (ENSMMDG00005003628) polr2g (ENSMMDG00005003624) eef1g (ENSMMDG00005003526) #22 ENSMMDG00005003514 ENSMMDG00005003505 #23 klhl4 (ENSMMDG00005003501) KLHL4 (ENSMMDG00005003498) PCDH11Y (ENSMMDG00005003485) TSC22D3 (ENSMMDG00005003471) MID2 (ENSMMDG00005002195) pmt (ENSMMDG00005002181) pmt (ENSMMDG00005002178) ENSMMDG00005002175 ENSMMDG00005002161 SLC16A2 (ENSMMDG00005002146) ENSMMDG00005002141 #9 ENSMMDG00005002137 pola2 (ENSMMDG00005001843) Cod MODERN SPECIES 1 ENSGMOG00000023395 ran (ENSGMOG00000014313) ENSGMOG00000022479 stx3b (ENSGMOG00000014287) ENSGMOG00000014213 ENSGMOG00000014181 ENSGMOG00000024343 ENSGMOG00000032682 ENSGMOG00000022426 ENSGMOG00000009102 ENSGMOG00000028265 ENSGMOG00000000471 ENSGMOG00000029429 ENSGMOG00000000491 ENSGMOG00000000527 eef1g (ENSGMOG00000000548) #22 ENSGMOG00000026444 klhl4 (ENSGMOG00000012257) ENSGMOG00000012255 ENSGMOG00000027815 ENSGMOG00000030517 ENSGMOG00000029406 ENSGMOG00000012249 ENSGMOG00000012245 ENSGMOG00000012225 ENSGMOG00000012232 ENSGMOG00000012216 ENSGMOG00000026010 ENSGMOG00000012212 ENSGMOG00000034322 ENSGMOG00000012202 Protacanthopterygii ANCESTRAL SPECIES 62 ENSGT00950000183059.a ENSGT00390000008975 ENSGT00390000007552 #22 ENSGT00940000165073.a.a ENSGT00940000154902 #23 ENSGT00970000197172 ENSGT00940000159818.g ENSGT00940000158335 ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000000610 ENSGT00970000193390.c.a.a.b ENSGT00390000017153.b ENSGT00940000164978.a ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000165034 ENSGT00940000176927 Northern pike MODERN SPECIES 3 ENSELUG00000002843 tmem33 (ENSELUG00000002853) bbs7 (ENSELUG00000002880) ccna2 (ENSELUG00000002896) anxa5a (ENSELUG00000003008) ENSELUG00000000091 fgfbp2a (ENSELUG00000003052) prom1a (ENSELUG00000003139) TAPT1 (ENSELUG00000003205) ldb2a (ENSELUG00000003229) qdpra (ENSELUG00000003249) fstl5 (ENSELUG00000003294) dctn4 (ENSELUG00000003352) ENSELUG00000003380 polr2g (ENSELUG00000003401) eef1g (ENSELUG00000003429) #22 AHNAK (ENSELUG00000034471) #23 klhl4 (ENSELUG00000000116) ENSELUG00000032791 PCDH11Y (ENSELUG00000020901) TSC22D3 (ENSELUG00000020930) MID2 (ENSELUG00000021095) pmt (ENSELUG00000021169) ENSELUG00000021198 ENSELUG00000021182 ENSELUG00000033833 ENSELUG00000033207 ENSELUG00000021215 ENSELUG00000021258 anxa6 (ENSELUG00000021328) tnip1 (ENSELUG00000021479) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00390000007552.q.a #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000007552.q.a #22 Salmo ANCESTRAL SPECIES 24 ENSGT00940000160064.a.b.a ENSGT01080000257697 ENSGT00940000159626.l ENSGT00940000160186.b.a ENSGT00940000171730 ENSGT00940000157197.f ENSGT00940000158553.b.b.e ENSGT00940000165849.g ENSGT00940000160581.h.b ENSGT01030000234543.A.b.p.a.b ENSGT00940000166166.g.a ENSGT00940000155429.b.a ENSGT00950000183054.a.a.b.c.a ENSGT00390000006954.h ENSGT00390000008975.w ENSGT00390000007552.q.a #22 ENSGT00940000165073.a.a.i.b ENSGT00940000154902.tb.b.a.b #23 ENSGT00940000154902.tb.b.b #23 ENSGT00940000159818.g.a ENSGT00940000158335.l ENSGT00940000156656.nb.a ENSGT00940000159460.e.a ENSGT00390000000610.j.b ENSGT00970000193390.c.a.a.b.b.a.a.b ENSGT00390000017153.b ENSGT00940000164978.a.f ENSGT00940000158770.e ENSGT00510000046908.a.a.a.i ENSGT00940000165034.f ENSGT00940000176927 Atlantic salmon MODERN SPECIES 24 ENSSSAG00000038420 ENSSSAG00000120184 SYUB (ENSSSAG00000037953) ENSSSAG00000040238 ENSSSAG00000104720 ENSSSAG00000047614 ENSSSAG00000047624 ENSSSAG00000097662 ENSSSAG00000057065 ENSSSAG00000057056 ENSSSAG00000057070 ENSSSAG00000103842 ENSSSAG00000096259 RPB7 (ENSSSAG00000057126) ENSSSAG00000057085 ef-1g (ENSSSAG00000057229) #22 ENSSSAG00000005685 ENSSSAG00000057422 ENSSSAG00000082237 #23 klhl4 (ENSSSAG00000058343) ENSSSAG00000057824 ENSSSAG00000109522 ENSSSAG00000089057 ENSSSAG00000119918 ENSSSAG00000058307 ENSSSAG00000100587 ENSSSAG00000057894 ENSSSAG00000085192 pgfrl (ENSSSAG00000057978) ENSSSAG00000058029 ANXA6 (ENSSSAG00000047797) River trout MODERN SPECIES 22 ENSSTUG00000035055 ENSSTUG00000035065 CLTB (ENSSTUG00000035158) ENSSTUG00000035170 faf2 (ENSSTUG00000035180) rnf44 (ENSSTUG00000035215) ENSSTUG00000035261 ENSSTUG00000035270 ctnna1 (ENSSTUG00000035320) LRRTM2 (ENSSTUG00000036148) ENSSTUG00000036150 tspan17 (ENSSTUG00000036163) ENSSTUG00000036283 dctn4 (ENSSTUG00000036289) polr2g (ENSSTUG00000036343) eef1g (ENSSTUG00000036419) #22 ENSSTUG00000000097 ENSSTUG00000000100 #23 klhl4 (ENSSTUG00000000106) ENSSTUG00000000129 ENSSTUG00000000140 MID2 (ENSSTUG00000000157) ENSSTUG00000000226 pmt (ENSSTUG00000000246) ENSSTUG00000000282 ENSSTUG00000000288 ENSSTUG00000000291 tnip1 (ENSSTUG00000000297) gpx3 (ENSSTUG00000000311) gpr137 (ENSSTUG00000000316) syvn1 (ENSSTUG00000000325) Huchen MODERN SPECIES 4643 eef1g (ENSHHUG00000044268) #22 Salmoninae ANCESTRAL SPECIES 583 ENSGT00390000008975.w ENSGT00390000007552.r #22 ENSGT00940000165073.a.a.i.b ENSGT00940000154902.tb.b.a.b #23 ENSGT00970000197172 ENSGT00390000006954.g ENSGT00950000183059.a ENSGT00390000008975.x ENSGT00390000007552.q.b #22 ENSGT00940000165073.a.a.i.a ENSGT00940000154902.tb.b.a.a #23 ENSGT00940000159818.g ENSGT00940000158335.l ENSGT00940000156656 ENSGT00940000159460.e.a ENSGT00390000000610.j.b ENSGT00970000193390.c.a.a.b.b.a.a.b Salmoninae_a ANCESTRAL SPECIES 106 ENSGT00910000144291 ENSGT00940000157197.e ENSGT00940000158553.b.b.f ENSGT00940000165849.g ENSGT00940000158553.b.b.e ENSGT00940000165849.h ENSGT00950000183175.B.a ENSGT00940000160581.h.b ENSGT01030000234543.A.b.p.a ENSGT00940000166166.g.b ENSGT00940000155429.b.b ENSGT00950000183054.a.a.b.c.b ENSGT00390000006954.g ENSGT00950000183059.a ENSGT00390000008975.x ENSGT00390000007552.q.b #22 ENSGT00940000165073.a.a.i.a ENSGT00940000154902.tb.b.a.a #23 ENSGT00940000159818.g.b ENSGT00940000158335.k ENSGT00940000159460.e.b ENSGT00390000000610.j.a ENSGT00970000193390.c.a.a.b.b.a.a.a ENSGT00940000164978.a.e ENSGT00940000158770.f ENSGT00510000046908.a.a.a.j ENSGT00940000165034.e ENSGT00940000157743.j ENSGT00940000155437 ENSGT00530000063860.a.g ENSGT00940000164810.h.a Salmo ANCESTRAL SPECIES 83 ENSGT00940000155429.b.b ENSGT00950000183054.a.a.b.c.b ENSGT00390000006954.g ENSGT00950000183059.a ENSGT00390000008975.x ENSGT00390000007552.q.b #22 ENSGT00940000154902.tb.b.a.a.a #23 ENSGT00940000159818.g.b ENSGT00940000158335.k ENSGT00940000156656.nb.b ENSGT00940000159460.e.b ENSGT00390000000610.j.a ENSGT00970000193390.c.a.a.b.b.a.a.a ENSGT00940000164978.a.e ENSGT00940000158770.f ENSGT00510000046908.a.a.a.j ENSGT00940000165034.e ENSGT00940000157743.j ENSGT00940000155437.d ENSGT00530000063860.a.g ENSGT00940000164810.g River trout MODERN SPECIES 4 CLTB (ENSSTUG00000038190) higd2a (ENSSTUG00000038176) faf2 (ENSSTUG00000038151) rnf44 (ENSSTUG00000037977) ENSSTUG00000037966 sncb (ENSSTUG00000037914) ENSSTUG00000037888 ctnna1 (ENSSTUG00000037275) ENSSTUG00000037224 ENSSTUG00000037209 tspan17 (ENSSTUG00000036984) ENSSTUG00000036958 dctn4 (ENSSTUG00000036858) ENSSTUG00000036799 polr2g (ENSSTUG00000036779) eef1g (ENSSTUG00000036282) #22 AHNAK (ENSSTUG00000036255) #23 klhl4 (ENSSTUG00000036028) ENSSTUG00000036018 ENSSTUG00000036012 MID2 (ENSSTUG00000035625) ENSSTUG00000035600 pmt (ENSSTUG00000035558) ENSSTUG00000035548 ENSSTUG00000035544 ENSSTUG00000035536 anxa6 (ENSSTUG00000032895) tnip1 (ENSSTUG00000032767) gpx3 (ENSSTUG00000022844) syvn1 (ENSSTUG00000022675) smad5 (ENSSTUG00000022608) Atlantic salmon MODERN SPECIES 28 rnf44 (ENSSSAG00000039659) ENSSSAG00000099003 ENSSSAG00000058162 sncb (ENSSSAG00000003870) ENSSSAG00000120056 ENSSSAG00000094970 ENSSSAG00000091797 ENSSSAG00000040586 ENSSSAG00000097986 ENSSSAG00000111203 tspan17 (ENSSSAG00000059062) ENSSSAG00000009030 dctn4 (ENSSSAG00000058920) ENSSSAG00000058700 polr2g (ENSSSAG00000058659) eef1g (ENSSSAG00000058507) #22 ENSSSAG00000058479 ENSSSAG00000101368 #23 ENSSSAG00000097655 #23 klhl4 (ENSSSAG00000057456) ENSSSAG00000058286 ENSSSAG00000108071 ENSSSAG00000058239 ENSSSAG00000102857 ENSSSAG00000117229 ENSSSAG00000058167 ENSSSAG00000121379 ENSSSAG00000057968 anxa6 (ENSSSAG00000063257) ENSSSAG00000067111 tnip1 (ENSSSAG00000063146) Huchen MODERN SPECIES 2891 dctn4 (ENSHHUG00000037827) polr2g (ENSHHUG00000037864) eef1g (ENSHHUG00000037952) #22 ENSHHUG00000037964 ENSHHUG00000037986 #23 ENSHHUG00000037995 Salmoninae ANCESTRAL SPECIES 583 ENSGT00390000008975.w ENSGT00390000007552.r #22 ENSGT00940000165073.a.a.i.b ENSGT00940000154902.tb.b.a.b #23 ENSGT00970000197172 ENSGT00390000006954.g ENSGT00950000183059.a ENSGT00390000008975.x ENSGT00390000007552.q.b #22 ENSGT00940000165073.a.a.i.a ENSGT00940000154902.tb.b.a.a #23 ENSGT00940000159818.g ENSGT00940000158335.l ENSGT00940000156656 ENSGT00940000159460.e.a ENSGT00390000000610.j.b ENSGT00970000193390.c.a.a.b.b.a.a.b Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00950000182810.B.a.hb ENSGT00390000000973.a.a.k ENSGT00940000156333 ENSGT00940000155980.C ENSGT00940000160064.a.b.a ENSGT01080000257697 ENSGT00940000159626.l ENSGT00940000160186.b.a ENSGT00940000171730 ENSGT00940000157197.f ENSGT00940000166166.g.a ENSGT00940000155429.b.a ENSGT00950000183054.a.a.b.c.a ENSGT00390000006954.h ENSGT00390000008975.w ENSGT00390000007552.r #22 ENSGT00940000165073.a.a.i.b ENSGT00940000154902.tb.b.a.b #23 ENSGT00940000154902.tb.b.b #23 ENSGT00940000159818.g.a ENSGT00940000158335.l ENSGT00940000156656 ENSGT00940000159460.e.a ENSGT00390000000610.j.b ENSGT00970000193390.c.a.a.b.b.a.a.b ENSGT00390000017153.b ENSGT00940000164978.a.f ENSGT00940000158770.e ENSGT00510000046908.a.a.a.i ENSGT00940000165034.f ENSGT00940000176927 Oncorhynchus DUPLICATION Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 45 ENSGT00940000156333 ENSGT00940000155980.C ENSGT00940000160064.a.b.a ENSGT01080000257697 ENSGT00950000182815.a.a.a.a.b.c ENSGT00940000159626.k.a ENSGT00940000160186.b.a ENSGT01050000245452 ENSGT00940000157197.f ENSGT00940000158553.b.b.e.b ENSGT00940000165849.h ENSGT00940000166166.g.a ENSGT00950000183054.a.a.b.c.a ENSGT00390000006954.h ENSGT00390000008975.w ENSGT00390000007552.r.a.a #22 ENSGT00940000165073.a.a.i.b.b ENSGT00940000158335.l ENSGT00940000156656.lb.a ENSGT00940000159460.e.a ENSGT00390000000610.j.b ENSGT00390000017153.b ENSGT00940000164978.a.f ENSGT00940000158770.e ENSGT00510000046908.a.a.a.i ENSGT00940000165034.f ENSGT00940000153986.b.b ENSGT00940000157743.i ENSGT00940000155437.f ENSGT00530000063860.a.h ENSGT00940000164810.h.b Rainbow trout MODERN SPECIES 5 ENSOMYG00000037778 ENSOMYG00000069695 ENSOMYG00000054838 ENSOMYG00000037742 ENSOMYG00000058729 ENSOMYG00000037725 ENSOMYG00000064802 ENSOMYG00000072538 ENSOMYG00000037716 ENSOMYG00000050327 ENSOMYG00000049837 ENSOMYG00000060860 ENSOMYG00000056629 ENSOMYG00000037710 rpb7 (ENSOMYG00000037692) eef1g (ENSOMYG00000037665) #22 ENSOMYG00000037646 ENSOMYG00000037637 #23 ENSOMYG00000037620 #23 klhl4 (ENSOMYG00000037613) ENSOMYG00000064454 ENSOMYG00000037596 ENSOMYG00000070981 ENSOMYG00000075082 ENSOMYG00000059646 ENSOMYG00000055997 ENSOMYG00000073770 ENSOMYG00000035682 ENSOMYG00000035660 ENSOMYG00000035656 anxa6 (ENSOMYG00000032224) Oncorhynchus_a ANCESTRAL SPECIES 46 ENSGT00950000183054.a.a.b.c.a ENSGT00390000008975.w ENSGT00390000007552.r.a.a #22 ENSGT00940000165073.a.a.i.b.b ENSGT00940000158335.l ENSGT00940000156656.lb.a ENSGT00940000159460.e.a ENSGT00390000000610.j.b ENSGT00390000017153.b ENSGT00940000164978.a.e.b ENSGT00940000158770.e ENSGT00510000046908.a.a.a.i ENSGT00940000165034.f ENSGT00940000153986.b.b ENSGT00940000157743.i ENSGT00940000155437.f ENSGT00530000063860.a.h ENSGT00940000164810.h.b Chinook salmon MODERN SPECIES 13 CLTB (ENSOTSG00005002771) ENSOTSG00005002759 ENSOTSG00005002754 cyp26a1 (ENSOTSG00005002546) cyp26a1 (ENSOTSG00005015397) ENSOTSG00005015395 npy7r (ENSOTSG00005015393) prelid1a (ENSOTSG00005015390) ENSOTSG00005015389 ENSOTSG00005015388 ENSOTSG00005015387 ENSOTSG00005015386 ENSOTSG00005015384 dctn4 (ENSOTSG00005015381) polr2g (ENSOTSG00005015379) eef1g (ENSOTSG00005015302) #22 ENSOTSG00005015300 klhl4 (ENSOTSG00005015297) ENSOTSG00005015294 ENSOTSG00005015295 ENSOTSG00005015292 TSC22D3 (ENSOTSG00005015290) ENSOTSG00005015289 lman2 (ENSOTSG00005014403) b4galt7 (ENSOTSG00005014392) emx3 (ENSOTSG00005014391) ENSOTSG00005014390 GM2A (ENSOTSG00005014386) SLC36A1 (ENSOTSG00005014384) atox1 (ENSOTSG00005014382) sparc (ENSOTSG00005014368) Coho salmon MODERN SPECIES 10 ENSOKIG00005016966 ENSOKIG00005016959 ENSOKIG00005016941 ENSOKIG00005016932 atrx (ENSOKIG00005016683) ENSOKIG00005016646 ENSOKIG00005025626 ENSOKIG00005025608 fgf16 (ENSOKIG00005025592) zdhhc15b (ENSOKIG00005025448) UPRT (ENSOKIG00005025307) abcb7 (ENSOKIG00005024772) ENSOKIG00005024727 ENSOKIG00005024718 polr2g (ENSOKIG00005024672) eef1g (ENSOKIG00005024002) #22 dctn4 (ENSOKIG00005023824) ENSOKIG00005023789 ENSOKIG00005023649 #23 klhl4 (ENSOKIG00005023464) ENSOKIG00005023450 ENSOKIG00005023444 ENSOKIG00005023429 TSC22D3 (ENSOKIG00005023412) MID2 (ENSOKIG00005023032) ENSOKIG00005022990 pmt (ENSOKIG00005022463) ENSOKIG00005022222 ENSOKIG00005022184 anxa6 (ENSOKIG00005017951) tnip1 (ENSOKIG00005017766) Oncorhynchus ANCESTRAL SPECIES 36 ENSGT00940000156829 ENSGT00390000008402.h ENSGT00940000157776.c.b.a ENSGT00950000183147.A.a.g.a.b ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a ENSGT00940000157624.b ENSGT00940000159153.f.b ENSGT00940000157159.e.b ENSGT00940000155944.f.a.e ENSGT00940000160477.h ENSGT00940000157848.a.a.b ENSGT00530000064011.d.e.b ENSGT00390000007552.r.a.b #22 ENSGT00950000182808.a.a.b.a.d.b ENSGT00940000157120.d.b ENSGT00940000164464.c.b ENSGT00390000013879 ENSGT00940000155832.d.j ENSGT00390000015485.f ENSGT00390000012351.cb.a ENSGT00940000164423.j ENSGT00940000158450.d.a.h ENSGT00940000155507.a.a.f ENSGT00940000154289.A.a.a.a ENSGT00940000154209.a.a.g.c ENSGT00940000155312.a.a.a ENSGT00940000156048.e.a.b.b.e.a ENSGT00940000156798.z Rainbow trout MODERN SPECIES 17 ENSOMYG00000035195 ENSOMYG00000035185 ENSOMYG00000035178 ENSOMYG00000069315 ENSOMYG00000034693 ENSOMYG00000034613 ENSOMYG00000034593 ENSOMYG00000034563 ENSOMYG00000034552 ENSOMYG00000075865 DPF3 (ENSOMYG00000034540) ENSOMYG00000032755 SIPA1L1 (ENSOMYG00000032402) ENSOMYG00000032376 ENSOMYG00000031682 ENSOMYG00000032358 #22 ENSOMYG00000032325 ENSOMYG00000032296 ENSOMYG00000032292 ENSOMYG00000057509 ENSOMYG00000032280 ENSOMYG00000032268 ENSOMYG00000032017 ENSOMYG00000031722 ENSOMYG00000031703 CHRM5 (ENSOMYG00000031687) RYR3 (ENSOMYG00000030485) ENSOMYG00000052244 FMN1 (ENSOMYG00000029396) GREM1 (ENSOMYG00000029378) ENSOMYG00000029353 Oncorhynchus_a ANCESTRAL SPECIES 33 ENSGT00940000156829 ENSGT00390000008402.h ENSGT00940000157776.c.b.a ENSGT00950000183147.A.a.g.a.b ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a ENSGT00940000157624.b ENSGT00940000159153.f.b ENSGT00940000157159.e.b ENSGT00940000155944.f.a.e ENSGT00940000160477.h ENSGT00940000157848.a.a.b ENSGT00530000064011.d.e.b ENSGT00390000007552.r.a.b #22 ENSGT00950000182808.a.a.b.a.d.b ENSGT00940000157120.d.b ENSGT00940000164464.c.b ENSGT00390000013879 ENSGT00940000155832.d.j ENSGT00390000015485.f ENSGT00390000012351.cb.a ENSGT00940000164423.j ENSGT00940000158450.d.a.h ENSGT00940000155507.a.a.f ENSGT00940000154289.A.a.a.a ENSGT00940000154209.a.a.g.c ENSGT00940000155312.a.a.a ENSGT00940000156048.e.a.b.b.e.a ENSGT00940000156798.z Coho salmon MODERN SPECIES 5 pomt2 (ENSOKIG00005011942) lin52 (ENSOKIG00005012180) VSX2 (ENSOKIG00005012192) SYNDIG1L (ENSOKIG00005012201) RASGRP1 (ENSOKIG00005012279) exd1 (ENSOKIG00005013115) DLL4 (ENSOKIG00005013140) CHAC1 (ENSOKIG00005013389) RHOV (ENSOKIG00005013397) DPF3 (ENSOKIG00005013405) RGS6 (ENSOKIG00005008891) SIPA1L1 (ENSOKIG00005009093) GPX2 (ENSOKIG00005009173) RAB15 (ENSOKIG00005009248) MAX (ENSOKIG00005009288) EEF1G (ENSOKIG00005009378) #22 ENSOKIG00005009391 SUSD6 (ENSOKIG00005009409) ENSOKIG00005009418 ENSOKIG00005009432 THBS1 (ENSOKIG00005009505) ENSOKIG00005010022 ENSOKIG00005010033 ENSOKIG00005010040 ENSOKIG00005010069 CHRM5 (ENSOKIG00005010084) RYR3 (ENSOKIG00005010252) FMN1 (ENSOKIG00005011571) ENSOKIG00005011626 GREM1 (ENSOKIG00005011672) arhgap11a (ENSOKIG00005011688) Chinook salmon MODERN SPECIES 32 ENSOTSG00005010108 pomt2 (ENSOTSG00005010077) lin52 (ENSOTSG00005010074) VSX2 (ENSOTSG00005010071) SYNDIG1L (ENSOTSG00005010068) RASGRP1 (ENSOTSG00005010045) ENSOTSG00005010043 DLL4 (ENSOTSG00005009905) CHAC1 (ENSOTSG00005009850) RHOV (ENSOTSG00005009847) ENSOTSG00005009846 dpf3 (ENSOTSG00005009842) RGS6 (ENSOTSG00005009636) SIPA1L1 (ENSOTSG00005009610) RAB15 (ENSOTSG00005009609) eef1g (ENSOTSG00005009608) #22 MAX (ENSOTSG00005009584) ENSOTSG00005009582 SUSD6 (ENSOTSG00005009580) ENSOTSG00005009577 ENSOTSG00005009572 THBS1 (ENSOTSG00005008466) ENSOTSG00005008459 zgc:194887 (ENSOTSG00005008458) chrm5a (ENSOTSG00005008457) RYR3 (ENSOTSG00005007734) FMN1 (ENSOTSG00005007701) GREM1 (ENSOTSG00005007699) arhgap11a (ENSOTSG00005007697) ENSOTSG00005007693 EIF2AK4 (ENSOTSG00005007688) Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00840000131501.a.a ENSGT00940000160186.b.b ENSGT00910000144291 ENSGT00940000157197.e ENSGT00940000158553.b.b.f ENSGT00940000165849.g ENSGT00940000158553.b.b.e.a ENSGT01090000261123 ENSGT00950000183175.B.a ENSGT00940000166166.g.b ENSGT00940000155429.b.b ENSGT00950000183054.a.a.b.c.b ENSGT00390000006954.g ENSGT00950000183059.a ENSGT00390000008975.x ENSGT00390000007552.r.b #22 ENSGT00940000165073.a.a.i.b.a ENSGT00940000154902.tb.b.a.b #23 ENSGT00940000158335.k ENSGT00940000156656.mb ENSGT00940000159460.e.b ENSGT00940000176927 ENSGT00940000157743.j ENSGT00940000155437.e ENSGT00530000063860.a.g ENSGT00940000164810.h.a ENSGT00940000158869.a ENSGT00940000167363.e ENSGT00940000153322.B.d.a.m ENSGT00390000017284.b.g ENSGT01030000235165.d Oncorhynchus_a ANCESTRAL SPECIES 34 ENSGT00840000131501.a.a ENSGT00940000160186.b.b ENSGT00910000144291 ENSGT00940000157197.e ENSGT00940000158553.b.b.f ENSGT00940000158553.b.b.e.a ENSGT01090000261123 ENSGT00950000183175.B.a ENSGT00940000166166.g.b ENSGT00940000155429.b.b ENSGT00950000183054.a.a.b.c.b ENSGT00390000006954.g ENSGT00390000006954.h ENSGT00950000183059.a ENSGT00390000008975.x ENSGT00390000007552.r.b #22 ENSGT00940000165073.a.a.i.b.a ENSGT00940000154902.tb.b.b #23 ENSGT00940000159818.g.a ENSGT00940000158335.k ENSGT00940000156656.lb.b ENSGT00940000159460.e.b ENSGT00940000176927 ENSGT00940000157743.j ENSGT00940000155437.e ENSGT00530000063860.a.g ENSGT00940000164810.h.a ENSGT00940000158869.a ENSGT00940000167363.e ENSGT00940000153322.B.d.a.m ENSGT00390000017284.b.g Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2955 ENSOTSG00005032983 polr2g (ENSOTSG00005033011) eef1g (ENSOTSG00005033014) #22 ENSOTSG00005033020 ENSOTSG00005033021 ENSOTSG00005033023 ENSOTSG00005033024 ENSOTSG00005033025 ENSOTSG00005033026 uts2a (ENSOTSG00005033028) ENSOTSG00005033030 tnfrsf9a (ENSOTSG00005033032) DVL1 (ENSOTSG00005033033) mxra8b (ENSOTSG00005033034) aurkaip1 (ENSOTSG00005033035) rap1gapa (ENSOTSG00005033036) ENSOTSG00005033073 zgc:162200 (ENSOTSG00005033421) Chinook salmon MODERN SPECIES 82 dctn4 (ENSOTSG00005042608) ENSOTSG00005042605 polr2g (ENSOTSG00005042601) eef1g (ENSOTSG00005042227) #22 ENSOTSG00005042222 ENSOTSG00005042213 ENSOTSG00005042212 Coho salmon MODERN SPECIES 6 rnf44 (ENSOKIG00005036092) ENSOKIG00005036168 sncb (ENSOKIG00005036182) ENSOKIG00005036208 ENSOKIG00005036214 ctnna1 (ENSOKIG00005036269) LRRTM2 (ENSOKIG00005036952) ENSOKIG00005036960 ENSOKIG00005036976 tspan17 (ENSOKIG00005037036) ENSOKIG00005037112 dctn4 (ENSOKIG00005037124) ENSOKIG00005037171 ENSOKIG00005037181 polr2g (ENSOKIG00005037238) eef1g (ENSOKIG00005037285) #22 ENSOKIG00005037775 AHNAK (ENSOKIG00005037785) #23 klhl4 (ENSOKIG00005037799) ENSOKIG00005037957 ENSOKIG00005037979 ENSOKIG00005038003 TSC22D3 (ENSOKIG00005038009) MID2 (ENSOKIG00005038047) ENSOKIG00005038052 ENSOKIG00005038057 ENSOKIG00005038090 ENSOKIG00005038098 ENSOKIG00005038120 ENSOKIG00005038220 ENSOKIG00005038233 Rainbow trout MODERN SPECIES 23 ENSOMYG00000067249 rnf44 (ENSOMYG00000036351) ENSOMYG00000071989 sncb (ENSOMYG00000053227) ENSOMYG00000058589 ENSOMYG00000072172 ENSOMYG00000051680 ENSOMYG00000033550 ENSOMYG00000035573 ENSOMYG00000050988 tspan17 (ENSOMYG00000035548) ENSOMYG00000035579 dctn4 (ENSOMYG00000065333) ENSOMYG00000069580 polr2g (ENSOMYG00000035649) eef1g (ENSOMYG00000035715) #22 ENSOMYG00000072753 ENSOMYG00000075133 #23 klhl4 (ENSOMYG00000075939) ENSOMYG00000036109 ENSOMYG00000059674 ENSOMYG00000072740 ENSOMYG00000060088 ENSOMYG00000050052 ENSOMYG00000073997 ENSOMYG00000062245 ENSOMYG00000058976 ENSOMYG00000063835 ENSOMYG00000070666 ENSOMYG00000037572 ENSOMYG00000050338 Huchen MODERN SPECIES 3337 ENSHHUG00000017602 ENSHHUG00000017587 ENSHHUG00000017579 ENSHHUG00000017568 ENSHHUG00000017565 ENSHHUG00000017562 ENSHHUG00000017549 ENSHHUG00000017541 ino80e (ENSHHUG00000017530) ENSHHUG00000017518 ENSHHUG00000017504 #22 ENSHHUG00000017491 ENSHHUG00000017482 Elephant shark MODERN SPECIES 2039 itpkcb (ENSCMIG00000007791) ENSCMIG00000007783 #22 ENSCMIG00000007780