Mammalia	ANCESTRAL SPECIES	31	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000161764 #23	ENSGT00940000154118.b #22	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104 #36	ENSGT01050000244905.C #37	ENSGT00390000006482	ENSGT00390000013978.d	ENSGT00940000161158
Theria	ANCESTRAL SPECIES	2	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104 #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00390000013978.d	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000154118.b #22	ENSGT00940000162028 #24	ENSGT00940000161764 #23	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9	ENSGT00940000155609 #8
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Primates	ANCESTRAL SPECIES	6	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000155609 #8	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Pan	ANCESTRAL SPECIES	4	ENSGT00940000163244.d.b.a.a.b #7	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p.c #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Bonobo	MODERN SPECIES	3	ENSPPAG00000020254 #7	R3HDM2 (ENSPPAG00000034395) #8	STAC3 (ENSPPAG00000032152) #9	NDUFA4L2 (ENSPPAG00000041071) #10	SHMT2 (ENSPPAG00000033906) #11	NXPH4 (ENSPPAG00000004184) #12	LRP1 (ENSPPAG00000029361) #13	STAT6 (ENSPPAG00000029694) #14	NAB2 (ENSPPAG00000031480) #15	NEMP1 (ENSPPAG00000032473) #16	MYO1A (ENSPPAG00000032265) #17	TAC3 (ENSPPAG00000039691) #18	ZBTB39 (ENSPPAG00000025376) #19	ENSPPAG00000017514 #20	GPR182 (ENSPPAG00000022193) #21	RDH16 (ENSPPAG00000010809) #22	SDR9C7 (ENSPPAG00000008394) #23	HSD17B6 (ENSPPAG00000029098) #24	PRIM1 (ENSPPAG00000034763) #25	ENSPPAG00000007016 #26	ENSPPAG00000012378 #27	ATP5F1B (ENSPPAG00000037354) #28	BAZ2A (ENSPPAG00000003707) #29	ENSPPAG00000042975 #30	ENSPPAG00000000307 #31	GLS2 (ENSPPAG00000028139) #32	SPRYD4 (ENSPPAG00000027537) #33	MIP (ENSPPAG00000043947) #34	TIMELESS (ENSPPAG00000035399) #35	APOF (ENSPPAG00000037531) #36	STAT2 (ENSPPAG00000041859) #37
Chimpanzee	MODERN SPECIES	3	ENSPTRG00000051409 #7	R3HDM2 (ENSPTRG00000046457) #8	STAC3 (ENSPTRG00000005126) #9	NDUFA4L2 (ENSPTRG00000045465) #10	SHMT2 (ENSPTRG00000005124) #11	NXPH4 (ENSPTRG00000005123) #12	LRP1 (ENSPTRG00000005122) #13	STAT6 (ENSPTRG00000005121) #14	NAB2 (ENSPTRG00000005120) #15	NEMP1 (ENSPTRG00000005119) #16	MYO1A (ENSPTRG00000005118) #17	TAC3 (ENSPTRG00000048234) #18	ZBTB39 (ENSPTRG00000044060) #19	ENSPTRG00000047240 #20	GPR182 (ENSPTRG00000005114) #21	RDH16 (ENSPTRG00000005113) #22	SDR9C7 (ENSPTRG00000005112) #23	PRIM1 (ENSPTRG00000022987) #25	ENSPTRG00000049588 ##26	PTGES3 (ENSPTRG00000005108) #27	ATP5F1B (ENSPTRG00000005107) #28	BAZ2A (ENSPTRG00000005106) #29	RBMS2 (ENSPTRG00000005104) #30	ENSPTRG00000043291 #31	GLS2 (ENSPTRG00000005101) #32	SPRYD4 (ENSPTRG00000005100) #33	MIP (ENSPTRG00000005099) #34	TIMELESS (ENSPTRG00000022963) #35	APOF (ENSPTRG00000005096) #36	STAT2 (ENSPTRG00000005095) #37	IL23A (ENSPTRG00000005093)
Human	MODERN SPECIES	3	INHBE (ENSG00000139269)	INHBC (ENSG00000175189)	R3HDM2 (ENSG00000179912) #8	STAC3 (ENSG00000185482) #9	NDUFA4L2 (ENSG00000185633) #10	SHMT2 (ENSG00000182199) #11	NXPH4 (ENSG00000182379) #12	LRP1 (ENSG00000123384) #13	STAT6 (ENSG00000166888) #14	NAB2 (ENSG00000166886) #15	NEMP1 (ENSG00000166881) #16	MYO1A (ENSG00000166866) #17	TAC3 (ENSG00000166863) #18	ZBTB39 (ENSG00000166860) #19	GPR182 (ENSG00000166856) #21	RDH16 (ENSG00000139547) #22	SDR9C7 (ENSG00000170426) #23	HSD17B6 (ENSG00000025423) #24	PRIM1 (ENSG00000198056) #25	ENSG00000285625	NACA (ENSG00000196531) #26	PTGES3 (ENSG00000110958) #27	ATP5F1B (ENSG00000110955) #28	BAZ2A (ENSG00000076108) #29	RBMS2 (ENSG00000076067) #30	GLS2 (ENSG00000135423) #32	SPRYD4 (ENSG00000176422) #33	MIP (ENSG00000135517) #34	TIMELESS (ENSG00000111602) #35	APOF (ENSG00000175336) #36	STAT2 (ENSG00000170581) #37
Gorilla	MODERN SPECIES	3	INHBE (ENSGGOG00000002772)	INHBC (ENSGGOG00000022398)	R3HDM2 (ENSGGOG00000015007) #8	STAC3 (ENSGGOG00000010753) #9	NDUFA4L2 (ENSGGOG00000010249) #10	SHMT2 (ENSGGOG00000010240) #11	NXPH4 (ENSGGOG00000010235) #12	LRP1 (ENSGGOG00000010171) #13	STAT6 (ENSGGOG00000001424) #14	NAB2 (ENSGGOG00000001421) #15	NEMP1 (ENSGGOG00000013143) #16	MYO1A (ENSGGOG00000013125) #17	TAC3 (ENSGGOG00000015090) #18	ZBTB39 (ENSGGOG00000024480) #19	GPR182 (ENSGGOG00000008046) #21	RDH16 (ENSGGOG00000016783) #22	SDR9C7 (ENSGGOG00000008037) #23	ENSGGOG00000039256	HSD17B6 (ENSGGOG00000009606) #24	PRIM1 (ENSGGOG00000013577) #25	ENSGGOG00000022648	ENSGGOG00000027957 #27	ATP5F1B (ENSGGOG00000011596) #28	BAZ2A (ENSGGOG00000011580) #29	ENSGGOG00000011570 #30	ENSGGOG00000037931 #30	ENSGGOG00000037831 #31	GLS2 (ENSGGOG00000016580) #32	SPRYD4 (ENSGGOG00000016575) #33	MIP (ENSGGOG00000016571) #34	TIMELESS (ENSGGOG00000016556) #35
Orangutan	MODERN SPECIES	3	INHBE (ENSPPYG00000034705)	INHBC (ENSPPYG00000032715)	R3HDM2 (ENSPPYG00000004685) #8	STAC3 (ENSPPYG00000033384) #9	ENSPPYG00000004684 #10	SHMT2 (ENSPPYG00000004683) #11	NXPH4 (ENSPPYG00000004682) #12	ENSPPYG00000041371 #13	STAT6 (ENSPPYG00000004680) #14	NAB2 (ENSPPYG00000004679) #15	NEMP1 (ENSPPYG00000004678) #16	MYO1A (ENSPPYG00000004677) #17	TAC3 (ENSPPYG00000004676) #18	ZBTB39 (ENSPPYG00000031176) #19	GPR182 (ENSPPYG00000039450) #21	RDH16 (ENSPPYG00000004675) #22	SDR9C7 (ENSPPYG00000004674) #23	HSD17B6 (ENSPPYG00000004673) #24	PRIM1 (ENSPPYG00000004672) #25	ENSPPYG00000004671	NACA (ENSPPYG00000004670) #26	PTGES3 (ENSPPYG00000004669) #27	ATP5F1B (ENSPPYG00000004668) #28	BAZ2A (ENSPPYG00000004667) #29	RBMS2 (ENSPPYG00000004665) #30	ENSPPYG00000035194	GLS2 (ENSPPYG00000004664) #32	SPRYD4 (ENSPPYG00000004663) #33	MIP (ENSPPYG00000004662) #34	TIMELESS (ENSPPYG00000004661) #35	ENSPPYG00000004660
Gibbon	MODERN SPECIES	1	INHBC (ENSNLEG00000017346)	R3HDM2 (ENSNLEG00000017351) #8	ENSNLEG00000032879	STAC3 (ENSNLEG00000028124) #9	NDUFA4L2 (ENSNLEG00000017371) #10	SHMT2 (ENSNLEG00000017373) #11	LRP1 (ENSNLEG00000030531) #13	STAT6 (ENSNLEG00000017396) #14	NAB2 (ENSNLEG00000017421) #15	NEMP1 (ENSNLEG00000017426) #16	MYO1A (ENSNLEG00000033040) #17	TAC3 (ENSNLEG00000017433) #18	ZBTB39 (ENSNLEG00000019268) #19	ENSNLEG00000034950 #20	GPR182 (ENSNLEG00000017438) #21	RDH16 (ENSNLEG00000017439) #22	SDR9C7 (ENSNLEG00000017440) #23	HSD17B6 (ENSNLEG00000017442) #24	PRIM1 (ENSNLEG00000017443) #25	ENSNLEG00000017453 #26	ENSNLEG00000017454 #27	ATP5F1B (ENSNLEG00000017458) #28	BAZ2A (ENSNLEG00000017462) #29	RBMS2 (ENSNLEG00000017466) #30	ENSNLEG00000019303 #31	GLS2 (ENSNLEG00000017473) #32	SPRYD4 (ENSNLEG00000017482) #33	MIP (ENSNLEG00000017484) #34	TIMELESS (ENSNLEG00000017486) #35	APOF (ENSNLEG00000017492) #36	STAT2 (ENSNLEG00000017494) #37
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Cercopithecinae_a	DUPLICATION
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Sooty mangabey	MODERN SPECIES	117	ENSCATG00000034566	STAC3 (ENSCATG00000035065) #9	NDUFA4L2 (ENSCATG00000042967) #10	SHMT2 (ENSCATG00000043563) #11	NXPH4 (ENSCATG00000035691) #12	LRP1 (ENSCATG00000044497) #13	STAT6 (ENSCATG00000040616) #14	NAB2 (ENSCATG00000023506) #15	NEMP1 (ENSCATG00000039924) #16	MYO1A (ENSCATG00000033380) #17	TAC3 (ENSCATG00000036447) #18	ZBTB39 (ENSCATG00000015348) #19	ENSCATG00000044587 #20	GPR182 (ENSCATG00000015166) #21	ENSCATG00000033733 #22	ENSCATG00000042416 #22	SDR9C7 (ENSCATG00000040729) #23	HSD17B6 (ENSCATG00000043939) #24	PRIM1 (ENSCATG00000031299) #25	NACA (ENSCATG00000019110) #26	ENSCATG00000015228 #27	ATP5F1B (ENSCATG00000037301) #28	BAZ2A (ENSCATG00000042491) #29	RBMS2 (ENSCATG00000003342) #30	ENSCATG00000045349 #31	GLS2 (ENSCATG00000039516) #32	SPRYD4 (ENSCATG00000017241) #33	MIP (ENSCATG00000036566) #34	TIMELESS (ENSCATG00000035871) #35	APOF (ENSCATG00000024930) #36	STAT2 (ENSCATG00000040123) #37
Drill	MODERN SPECIES	983	ENSMLEG00000031276	R3HDM2 (ENSMLEG00000028915) #8	STAC3 (ENSMLEG00000043319) #9	NDUFA4L2 (ENSMLEG00000032629) #10	SHMT2 (ENSMLEG00000031792) #11	NXPH4 (ENSMLEG00000031215) #12	LRP1 (ENSMLEG00000039373) #13	STAT6 (ENSMLEG00000038113) #14	NAB2 (ENSMLEG00000015890) #15	NEMP1 (ENSMLEG00000030213) #16	MYO1A (ENSMLEG00000029951) #17	TAC3 (ENSMLEG00000039458) #18	ZBTB39 (ENSMLEG00000026718) #19	ENSMLEG00000042710 #20	GPR182 (ENSMLEG00000021221) #21	RDH16 (ENSMLEG00000037989) #22	SDR9C7 (ENSMLEG00000034967) #23	HSD17B6 (ENSMLEG00000029350) #24	PRIM1 (ENSMLEG00000008369) #25	NACA (ENSMLEG00000032530) #26	PTGES3 (ENSMLEG00000043895) #27	ATP5F1B (ENSMLEG00000034572) #28	BAZ2A (ENSMLEG00000042063) #29	RBMS2 (ENSMLEG00000032780) #30	ENSMLEG00000004650 #31	GLS2 (ENSMLEG00000042740) #32	SPRYD4 (ENSMLEG00000008953) #33	MIP (ENSMLEG00000033868) #34	TIMELESS (ENSMLEG00000040486) #35
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000162107	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.a.l.b ##31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.b.b.b	ENSGT00500000045104.g #36
Rhesus	MODERN SPECIES	2	INHBE (ENSMMUG00000001124)	R3HDM2 (ENSMMUG00000021789) #8	STAC3 (ENSMMUG00000021787) #9	NDUFA4L2 (ENSMMUG00000021786) #10	SHMT2 (ENSMMUG00000021785) #11	NXPH4 (ENSMMUG00000021784) #12	LRP1 (ENSMMUG00000021782) #13	STAT6 (ENSMMUG00000017527) #14	NAB2 (ENSMMUG00000017525) #15	NEMP1 (ENSMMUG00000019783) #16	MYO1A (ENSMMUG00000013518) #17	TAC3 (ENSMMUG00000003203) #18	GPR182 (ENSMMUG00000021114) #21	ENSMMUG00000003763 #22	ZBTB39 (ENSMMUG00000043411) #19	RDH16 (ENSMMUG00000060449) #22	SDR9C7 (ENSMMUG00000057714) #23	ENSMMUG00000051454	HSD17B6 (ENSMMUG00000057617) #24	PRIM1 (ENSMMUG00000004522) #25	NACA (ENSMMUG00000003073) ##26	PTGES3 (ENSMMUG00000013766) #27	ATP5F1B (ENSMMUG00000001027) #28	BAZ2A (ENSMMUG00000019332) #29	RBMS2 (ENSMMUG00000019330) #30	SPRYD4 (ENSMMUG00000053986) #33	GLS2 (ENSMMUG00000000860) #32	MIP (ENSMMUG00000010334) #34	TIMELESS (ENSMMUG00000021878) #35	ENSMMUG00000053460	APOF (ENSMMUG00000063898) #36
Crab-eating macaque	MODERN SPECIES	2	ENSMFAG00000055651	R3HDM2 (ENSMFAG00000036385) #8	NDUFA4L2 (ENSMFAG00000055308) #10	SHMT2 (ENSMFAG00000002112) #11	ENSMFAG00000042434 #12	LRP1 (ENSMFAG00000039927) #13	STAT6 (ENSMFAG00000036764) #14	NAB2 (ENSMFAG00000036629) #15	NEMP1 (ENSMFAG00000001688) #16	MYO1A (ENSMFAG00000044427) #17	TAC3 (ENSMFAG00000035535) #18	ZBTB39 (ENSMFAG00000012946) #19	GPR182 (ENSMFAG00000064680) #21	ENSMFAG00000034508	ENSMFAG00000045675 #22	ENSMFAG00000052881 #22	SDR9C7 (ENSMFAG00000034208) #23	HSD17B6 (ENSMFAG00000040118) #24	ENSMFAG00000004178 #26	PRIM1 (ENSMFAG00000036445) #25	ENSMFAG00000045371 #27	ATP5F1B (ENSMFAG00000042914) #28	BAZ2A (ENSMFAG00000029840) #29	RBMS2 (ENSMFAG00000002049) #30	ENSMFAG00000000609 ##31	GLS2 (ENSMFAG00000045451) #32	SPRYD4 (ENSMFAG00000003483) #33	MIP (ENSMFAG00000030328) #34	TIMELESS (ENSMFAG00000030313) #35	ENSMFAG00000064858	APOF (ENSMFAG00000036691) #36
Pig-tailed macaque	MODERN SPECIES	526	INHBE (ENSMNEG00000040355)	INHBC (ENSMNEG00000043803)	R3HDM2 (ENSMNEG00000025314) #8	STAC3 (ENSMNEG00000035422) #9	NDUFA4L2 (ENSMNEG00000030349) #10	SHMT2 (ENSMNEG00000041793) #11	NXPH4 (ENSMNEG00000042450) #12	LRP1 (ENSMNEG00000032147) #13	STAT6 (ENSMNEG00000045129) #14	NAB2 (ENSMNEG00000028556) #15	NEMP1 (ENSMNEG00000023962) #16	MYO1A (ENSMNEG00000045540) #17	TAC3 (ENSMNEG00000042940) #18	ZBTB39 (ENSMNEG00000015989) #19	ENSMNEG00000040609 #20	RDH16 (ENSMNEG00000045214) #22	SDR9C7 (ENSMNEG00000045037) #23	HSD17B6 (ENSMNEG00000037670) #24	PRIM1 (ENSMNEG00000032559) #25	NACA (ENSMNEG00000034624) #26	ENSMNEG00000032804 #27	ATP5F1B (ENSMNEG00000034124) #28	BAZ2A (ENSMNEG00000034555) #29	RBMS2 (ENSMNEG00000035121) #30	ENSMNEG00000030798 #31	GLS2 (ENSMNEG00000035725) #32	SPRYD4 (ENSMNEG00000038600) #33	MIP (ENSMNEG00000033083) #34	TIMELESS (ENSMNEG00000040552) #35	APOF (ENSMNEG00000044594) #36	STAT2 (ENSMNEG00000034007) #37
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000160235	ENSGT00940000162107	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.a.l.b ##31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.b.b.b
Crab-eating macaque	MODERN SPECIES	2	INHBE (ENSMFAG00000035874)	ENSMFAG00000055651	R3HDM2 (ENSMFAG00000036385) #8	NDUFA4L2 (ENSMFAG00000055308) #10	SHMT2 (ENSMFAG00000002112) #11	ENSMFAG00000042434 #12	LRP1 (ENSMFAG00000039927) #13	STAT6 (ENSMFAG00000036764) #14	NAB2 (ENSMFAG00000036629) #15	NEMP1 (ENSMFAG00000001688) #16	MYO1A (ENSMFAG00000044427) #17	TAC3 (ENSMFAG00000035535) #18	ZBTB39 (ENSMFAG00000012946) #19	GPR182 (ENSMFAG00000064680) #21	ENSMFAG00000034508	ENSMFAG00000045675 #22	ENSMFAG00000052881 #22	SDR9C7 (ENSMFAG00000034208) #23	HSD17B6 (ENSMFAG00000040118) #24	ENSMFAG00000004178 #26	PRIM1 (ENSMFAG00000036445) #25	ENSMFAG00000045371 #27	ATP5F1B (ENSMFAG00000042914) #28	BAZ2A (ENSMFAG00000029840) #29	RBMS2 (ENSMFAG00000002049) #30	ENSMFAG00000000609 ##31	GLS2 (ENSMFAG00000045451) #32	SPRYD4 (ENSMFAG00000003483) #33	MIP (ENSMFAG00000030328) #34	TIMELESS (ENSMFAG00000030313) #35	ENSMFAG00000064858
Rhesus	MODERN SPECIES	2	ARHGAP9 (ENSMMUG00000022060)	GLI1 (ENSMMUG00000022058)	INHBE (ENSMMUG00000001124)	R3HDM2 (ENSMMUG00000021789) #8	STAC3 (ENSMMUG00000021787) #9	NDUFA4L2 (ENSMMUG00000021786) #10	SHMT2 (ENSMMUG00000021785) #11	NXPH4 (ENSMMUG00000021784) #12	LRP1 (ENSMMUG00000021782) #13	STAT6 (ENSMMUG00000017527) #14	NAB2 (ENSMMUG00000017525) #15	NEMP1 (ENSMMUG00000019783) #16	MYO1A (ENSMMUG00000013518) #17	TAC3 (ENSMMUG00000003203) #18	GPR182 (ENSMMUG00000021114) #21	ENSMMUG00000003763 #22	ZBTB39 (ENSMMUG00000043411) #19	RDH16 (ENSMMUG00000060449) #22	SDR9C7 (ENSMMUG00000057714) #23	ENSMMUG00000051454	HSD17B6 (ENSMMUG00000057617) #24	PRIM1 (ENSMMUG00000004522) #25	NACA (ENSMMUG00000003073) ##26	PTGES3 (ENSMMUG00000013766) #27	ATP5F1B (ENSMMUG00000001027) #28	BAZ2A (ENSMMUG00000019332) #29	RBMS2 (ENSMMUG00000019330) #30	SPRYD4 (ENSMMUG00000053986) #33	GLS2 (ENSMMUG00000000860) #32	MIP (ENSMMUG00000010334) #34	TIMELESS (ENSMMUG00000021878) #35
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000166603	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00940000155609 #8	ENSGT00910000147730	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00910000146902 #20	ENSGT00940000154307.D #21	ENSGT00940000154118.b.gb #22	ENSGT00940000154118.b.fb #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.m #27	ENSGT00550000074800.fb #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000005727.a.b.a.b.c.b.b #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36
Sooty mangabey	MODERN SPECIES	117	R3HDM2 (ENSCATG00000036929) #8	ENSCATG00000034566	STAC3 (ENSCATG00000035065) #9	NDUFA4L2 (ENSCATG00000042967) #10	SHMT2 (ENSCATG00000043563) #11	NXPH4 (ENSCATG00000035691) #12	LRP1 (ENSCATG00000044497) #13	STAT6 (ENSCATG00000040616) #14	NAB2 (ENSCATG00000023506) #15	NEMP1 (ENSCATG00000039924) #16	MYO1A (ENSCATG00000033380) #17	TAC3 (ENSCATG00000036447) #18	ZBTB39 (ENSCATG00000015348) #19	ENSCATG00000044587 #20	GPR182 (ENSCATG00000015166) #21	ENSCATG00000033733 #22	ENSCATG00000042416 #22	SDR9C7 (ENSCATG00000040729) #23	HSD17B6 (ENSCATG00000043939) #24	PRIM1 (ENSCATG00000031299) #25	NACA (ENSCATG00000019110) #26	ENSCATG00000015228 #27	ATP5F1B (ENSCATG00000037301) #28	BAZ2A (ENSCATG00000042491) #29	RBMS2 (ENSCATG00000003342) #30	ENSCATG00000045349 #31	GLS2 (ENSCATG00000039516) #32	SPRYD4 (ENSCATG00000017241) #33	MIP (ENSCATG00000036566) #34	TIMELESS (ENSCATG00000035871) #35	APOF (ENSCATG00000024930) #36
Vervet Monkey	MODERN SPECIES	2	INHBE (ENSCSAG00000004900)	INHBC (ENSCSAG00000004904)	R3HDM2 (ENSCSAG00000004911) #8	STAC3 (ENSCSAG00000004918) #9	NDUFA4L2 (ENSCSAG00000004922) #10	SHMT2 (ENSCSAG00000004929) #11	NXPH4 (ENSCSAG00000004932) #12	LRP1 (ENSCSAG00000004953) #13	STAT6 (ENSCSAG00000004973) #14	NAB2 (ENSCSAG00000004977) #15	NEMP1 (ENSCSAG00000004982) #16	MYO1A (ENSCSAG00000004990) #17	TAC3 (ENSCSAG00000004995) #18	ZBTB39 (ENSCSAG00000018897) #19	GPR182 (ENSCSAG00000018895) #21	RDH16 (ENSCSAG00000004999) #22	SDR9C7 (ENSCSAG00000005002) #23	HSD17B6 (ENSCSAG00000005007) #24	ENSCSAG00000005015 #25	ENSCSAG00000005018 ##26	ENSCSAG00000005020 ##26	ATP5F1B (ENSCSAG00000005027) #28	BAZ2A (ENSCSAG00000005062) #29	RBMS2 (ENSCSAG00000005074) #30	GLS2 (ENSCSAG00000005081) #32	SPRYD4 (ENSCSAG00000005075) #33	MIP (ENSCSAG00000005087) #34	TIMELESS (ENSCSAG00000005142) #35	APOF (ENSCSAG00000005156) #36	STAT2 (ENSCSAG00000005161) #37	IL23A (ENSCSAG00000005166)
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000154118.b #22
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	210																ENSRROG00000002573 #22
Golden snub-nosed monkey	MODERN SPECIES	249																ENSRROG00000038741 #22
Black snub-nosed monkey	MODERN SPECIES	1882																RDH16 (ENSRBIG00000031499) #22	ENSRBIG00000003143	TESPA1 (ENSRBIG00000039584)	NEUROD4 (ENSRBIG00000031033)	ENSRBIG00000026192	OR9K2 (ENSRBIG00000019028)
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609.a.a #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609.a.a #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Marmoset	MODERN SPECIES	21	ENSCJAG00000007365 #8	STAC3 (ENSCJAG00000037826) #9	NDUFA4L2 (ENSCJAG00000039126) #10	SHMT2 (ENSCJAG00000007438) #11	NXPH4 (ENSCJAG00000071109) #12	LRP1 (ENSCJAG00000010289) #13	ENSCJAG00000070274	ENSCJAG00000086164	STAT6 (ENSCJAG00000010327) #14	NAB2 (ENSCJAG00000010414) #15	NEMP1 (ENSCJAG00000010449) #16	MYO1A (ENSCJAG00000010493) #17	ENSCJAG00000078826	ZBTB39 (ENSCJAG00000045887) #19	GPR182 (ENSCJAG00000010632) #21	RDH16 (ENSCJAG00000071462) #22	SDR9C7 (ENSCJAG00000042213) #23	ENSCJAG00000080305	HSD17B6 (ENSCJAG00000010652) #24	PRIM1 (ENSCJAG00000010662) #25	ENSCJAG00000045644 ##26	ENSCJAG00000067823	PTGES3 (ENSCJAG00000010724) #27	ENSCJAG00000033571 #28	BAZ2A (ENSCJAG00000010774) #29	RBMS2 (ENSCJAG00000010803) #30	GLS2 (ENSCJAG00000010875) #32	SPRYD4 (ENSCJAG00000039389) #33	MIP (ENSCJAG00000010971) #34	TIMELESS (ENSCJAG00000010984) #35	APOF (ENSCJAG00000011065) #36
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000160235	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609.a.a #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.p #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Capuchin	MODERN SPECIES	96	GLI1 (ENSCCAG00000026059)	INHBE (ENSCCAG00000036121)	INHBC (ENSCCAG00000031238)	R3HDM2 (ENSCCAG00000026083) #8	STAC3 (ENSCCAG00000026123) #9	NDUFA4L2 (ENSCCAG00000023385) #10	SHMT2 (ENSCCAG00000032795) #11	NXPH4 (ENSCCAG00000021360) #12	LRP1 (ENSCCAG00000037240) #13	STAT6 (ENSCCAG00000021197) #14	NAB2 (ENSCCAG00000034977) #15	NEMP1 (ENSCCAG00000037438) #16	MYO1A (ENSCCAG00000028277) #17	TAC3 (ENSCCAG00000025170) #18	ZBTB39 (ENSCCAG00000015143) #19	RDH16 (ENSCCAG00000027610) #22	SDR9C7 (ENSCCAG00000037710) #23	HSD17B6 (ENSCCAG00000030523) #24	PRIM1 (ENSCCAG00000017735) #25	NACA (ENSCCAG00000023819) ##26	ENSCCAG00000028637 #27	ENSCCAG00000026178 #28	BAZ2A (ENSCCAG00000033508) #29	RBMS2 (ENSCCAG00000030291) #30	ENSCCAG00000022716 #32	SPRYD4 (ENSCCAG00000028028) #33	MIP (ENSCCAG00000032355) #34	TIMELESS (ENSCCAG00000036271) #35	APOF (ENSCCAG00000025558) #36	STAT2 (ENSCCAG00000026474) #37	IL23A (ENSCCAG00000016182)
Bolivian squirrel monkey	MODERN SPECIES	60	ARHGAP9 (ENSSBOG00000025479)	GLI1 (ENSSBOG00000023889)	INHBE (ENSSBOG00000020369)	INHBC (ENSSBOG00000036100)	R3HDM2 (ENSSBOG00000023547) #8	ENSSBOG00000036259 #9	NDUFA4L2 (ENSSBOG00000000521) #10	SHMT2 (ENSSBOG00000028812) #11	LRP1 (ENSSBOG00000033999) #13	STAT6 (ENSSBOG00000020733) #14	NAB2 (ENSSBOG00000021938) #15	NEMP1 (ENSSBOG00000036147) #16	MYO1A (ENSSBOG00000028972) #17	TAC3 (ENSSBOG00000032982) #18	ZBTB39 (ENSSBOG00000020135) #19	RDH16 (ENSSBOG00000026865) #22	SDR9C7 (ENSSBOG00000024925) #23	HSD17B6 (ENSSBOG00000018711) #24	PRIM1 (ENSSBOG00000035864) #25	ENSSBOG00000034868 #26
Mas night monkey	MODERN SPECIES	1031																RDH16 (ENSANAG00000032638) #22	SDR9C7 (ENSANAG00000026961) #23	ENSANAG00000034716	HSD17B6 (ENSANAG00000033905) #24	PRIM1 (ENSANAG00000027645) #25	ENSANAG00000034226 ##26	ENSANAG00000033609 #27	ATP5F1B (ENSANAG00000032807) #28	BAZ2A (ENSANAG00000019057) #29	RBMS2 (ENSANAG00000038292) #30	GLS2 (ENSANAG00000021030) #32	SPRYD4 (ENSANAG00000036275) #33	MIP (ENSANAG00000028757) #34	TIMELESS (ENSANAG00000035017) #35	APOF (ENSANAG00000026056) #36	STAT2 (ENSANAG00000032564) #37
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	2593																ENSTSYG00000035799 #22	SDR9C7 (ENSTSYG00000037162) #23
Tarsier	MODERN SPECIES	5698										LRP1 (ENSTSYG00000014161) #13	STAT6 (ENSTSYG00000000267) #14	NAB2 (ENSTSYG00000032600) #15	NEMP1 (ENSTSYG00000004277) #16	MYO1A (ENSTSYG00000010107) #17	TAC3 (ENSTSYG00000035038) #18	ENSTSYG00000004209 #22
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	158	INHBC (ENSOGAG00000005212)	ENSOGAG00000012055 #8	STAC3 (ENSOGAG00000012053) #9	NDUFA4L2 (ENSOGAG00000034520) #10	SHMT2 (ENSOGAG00000001857) #11	NXPH4 (ENSOGAG00000031405) #12	LRP1 (ENSOGAG00000012030) #13	STAT6 (ENSOGAG00000005002) #14	NAB2 (ENSOGAG00000025043) #15	ENSOGAG00000024444	NEMP1 (ENSOGAG00000013820) #16	MYO1A (ENSOGAG00000001099) #17	TAC3 (ENSOGAG00000031209) #18	ZBTB39 (ENSOGAG00000001098) #19	GPR182 (ENSOGAG00000001091) #21	ENSOGAG00000001090 #22	ENSOGAG00000025063 #22	SDR9C7 (ENSOGAG00000008224) #23	HSD17B6 (ENSOGAG00000012561) #24	PTGES3 (ENSOGAG00000028667) #27	ATP5F1B (ENSOGAG00000003541) #28	BAZ2A (ENSOGAG00000003537) #29	RBMS2 (ENSOGAG00000003534) #30	GLS2 (ENSOGAG00000012811) #32	SPRYD4 (ENSOGAG00000005380) #33	MIP (ENSOGAG00000012810) #34	TIMELESS (ENSOGAG00000012808) #35	STAT2 (ENSOGAG00000001538) #37	IL23A (ENSOGAG00000027011)	PAN2 (ENSOGAG00000030620)	CNPY2 (ENSOGAG00000001536)
Bushbaby	MODERN SPECIES	158	ENSOGAG00000012055 #8	STAC3 (ENSOGAG00000012053) #9	NDUFA4L2 (ENSOGAG00000034520) #10	SHMT2 (ENSOGAG00000001857) #11	NXPH4 (ENSOGAG00000031405) #12	LRP1 (ENSOGAG00000012030) #13	STAT6 (ENSOGAG00000005002) #14	NAB2 (ENSOGAG00000025043) #15	ENSOGAG00000024444	NEMP1 (ENSOGAG00000013820) #16	MYO1A (ENSOGAG00000001099) #17	TAC3 (ENSOGAG00000031209) #18	ZBTB39 (ENSOGAG00000001098) #19	GPR182 (ENSOGAG00000001091) #21	ENSOGAG00000001090 #22	ENSOGAG00000025063 #22	SDR9C7 (ENSOGAG00000008224) #23	HSD17B6 (ENSOGAG00000012561) #24	PTGES3 (ENSOGAG00000028667) #27	ATP5F1B (ENSOGAG00000003541) #28	BAZ2A (ENSOGAG00000003537) #29	RBMS2 (ENSOGAG00000003534) #30	GLS2 (ENSOGAG00000012811) #32	SPRYD4 (ENSOGAG00000005380) #33	MIP (ENSOGAG00000012810) #34	TIMELESS (ENSOGAG00000012808) #35	STAT2 (ENSOGAG00000001538) #37	IL23A (ENSOGAG00000027011)	PAN2 (ENSOGAG00000030620)	CNPY2 (ENSOGAG00000001536)	CS (ENSOGAG00000001533)
Lemuriformes	DUPLICATION
Lemuriformes	DUPLICATION
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.lb.b #22	ENSGT00940000162028 #24	ENSGT00940000154118.b.lb.a #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482	ENSGT00390000013978.d
Mouse lemur	DUPLICATION
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	29	IFNG (ENSMICG00000004223)	IL26 (ENSMICG00000003647)	IL22 (ENSMICG00000003654)	MDM1 (ENSMICG00000003661)	RAP1B (ENSMICG00000013148)	NUP107 (ENSMICG00000013152)	SLC35E3 (ENSMICG00000029927)	C12orf40 (ENSMICG00000013199)	ABCD2 (ENSMICG00000033054)	KIF21A (ENSMICG00000013145)	CPNE8 (ENSMICG00000017464)	ENSMICG00000029831	ENSMICG00000005398	SYT10 (ENSMICG00000010299)	ENSMICG00000037631	ENSMICG00000047187 #22	ENSMICG00000047530 #22	ENSMICG00000047394 #22	ENSMICG00000037040	SDR9C7 (ENSMICG00000041509) #23	HSD17B6 (ENSMICG00000043569) #24	ENSMICG00000045041	ENSMICG00000036736	PRIM1 (ENSMICG00000006060) #25	ENSMICG00000036539 #26	PTGES3 (ENSMICG00000001086) #27	ENSMICG00000045771 #28	BAZ2A (ENSMICG00000001077) #29	RBMS2 (ENSMICG00000001075) #30	GLS2 (ENSMICG00000010158) #32	SPRYD4 (ENSMICG00000042006) #33
Mouse lemur	MODERN SPECIES	29	IL26 (ENSMICG00000003647)	IL22 (ENSMICG00000003654)	MDM1 (ENSMICG00000003661)	RAP1B (ENSMICG00000013148)	NUP107 (ENSMICG00000013152)	SLC35E3 (ENSMICG00000029927)	C12orf40 (ENSMICG00000013199)	ABCD2 (ENSMICG00000033054)	KIF21A (ENSMICG00000013145)	CPNE8 (ENSMICG00000017464)	ENSMICG00000029831	ENSMICG00000005398	SYT10 (ENSMICG00000010299)	ENSMICG00000037631	ENSMICG00000047187 #22	ENSMICG00000047530 #22	ENSMICG00000047394 #22	ENSMICG00000037040	SDR9C7 (ENSMICG00000041509) #23	HSD17B6 (ENSMICG00000043569) #24	ENSMICG00000045041	ENSMICG00000036736	PRIM1 (ENSMICG00000006060) #25	ENSMICG00000036539 #26	PTGES3 (ENSMICG00000001086) #27	ENSMICG00000045771 #28	BAZ2A (ENSMICG00000001077) #29	RBMS2 (ENSMICG00000001075) #30	GLS2 (ENSMICG00000010158) #32	SPRYD4 (ENSMICG00000042006) #33	MIP (ENSMICG00000027583) #34
Mouse lemur	MODERN SPECIES	29	INHBE (ENSMICG00000005375)	INHBC (ENSMICG00000043104)	R3HDM2 (ENSMICG00000012389) #8	STAC3 (ENSMICG00000012382) #9	NDUFA4L2 (ENSMICG00000034473) #10	SHMT2 (ENSMICG00000012350) #11	NXPH4 (ENSMICG00000033243) #12	LRP1 (ENSMICG00000012273) #13	STAT6 (ENSMICG00000009087) #14	NAB2 (ENSMICG00000047570) #15	NEMP1 (ENSMICG00000009074) #16	MYO1A (ENSMICG00000009059) #17	TAC3 (ENSMICG00000002147) #18	GPR182 (ENSMICG00000000900) #21	ENSMICG00000028166	ENSMICG00000041961 #22	PDZRN4 (ENSMICG00000043485)	GXYLT1 (ENSMICG00000008275)	YAF2 (ENSMICG00000006755)	ENSMICG00000017422	PPHLN1 (ENSMICG00000037301)	PRICKLE1 (ENSMICG00000015421)	ADAMTS20 (ENSMICG00000014631)	PUS7L (ENSMICG00000043043)	IRAK4 (ENSMICG00000007741)	TWF1 (ENSMICG00000032658)	TMEM117 (ENSMICG00000007749)	NELL2 (ENSMICG00000007752)	DBX2 (ENSMICG00000031036)	ANO6 (ENSMICG00000004893)	ENSMICG00000044858
Lemuriformes_a	ANCESTRAL SPECIES	27	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.lb.b #22	ENSGT00940000162028 #24	ENSGT00940000154118.b.lb.a #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482	ENSGT00390000013978.d
Greater bamboo lemur	MODERN SPECIES	128	NXPH4 (ENSPSMG00000023199) #12	LRP1 (ENSPSMG00000023233) #13	STAT6 (ENSPSMG00000023272) #14	NAB2 (ENSPSMG00000023295) #15	NEMP1 (ENSPSMG00000023310) #16	MYO1A (ENSPSMG00000023326) #17	TAC3 (ENSPSMG00000023334) #18	ZBTB39 (ENSPSMG00000023342) #19	GPR182 (ENSPSMG00000023346) #21	ENSPSMG00000023352 #22	ENSPSMG00000023358	ENSPSMG00000023363 #24	ENSPSMG00000023371 #22	ENSPSMG00000023379 #24	ENSPSMG00000023385 #24	ENSPSMG00000023390 #22	SDR9C7 (ENSPSMG00000023397) #23	HSD17B6 (ENSPSMG00000023411) #24	ENSPSMG00000023416	PRIM1 (ENSPSMG00000023427) #25	ENSPSMG00000023464 #26	ENSPSMG00000023507 #27	ENSPSMG00000023515	ATP5F1B (ENSPSMG00000023521) #28	BAZ2A (ENSPSMG00000023555) #29	RBMS2 (ENSPSMG00000023596) #30	GLS2 (ENSPSMG00000023676) #32	SPRYD4 (ENSPSMG00000023714) #33	ENSPSMG00000023721 #34	TIMELESS (ENSPSMG00000023752) #35	ENSPSMG00000023767
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.lb.b #22	ENSGT00940000162028 #24	ENSGT00940000154118.b.lb.a #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Lemuriformes_a	ANCESTRAL SPECIES	27	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.lb.b #22	ENSGT00940000162028 #24	ENSGT00940000154118.b.lb.a #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	128	STAC3 (ENSPSMG00000023166) #9	NDUFA4L2 (ENSPSMG00000023172) #10	SHMT2 (ENSPSMG00000023192) #11	NXPH4 (ENSPSMG00000023199) #12	LRP1 (ENSPSMG00000023233) #13	STAT6 (ENSPSMG00000023272) #14	NAB2 (ENSPSMG00000023295) #15	NEMP1 (ENSPSMG00000023310) #16	MYO1A (ENSPSMG00000023326) #17	TAC3 (ENSPSMG00000023334) #18	ZBTB39 (ENSPSMG00000023342) #19	GPR182 (ENSPSMG00000023346) #21	ENSPSMG00000023352 #22	ENSPSMG00000023358	ENSPSMG00000023363 #24	ENSPSMG00000023371 #22	ENSPSMG00000023379 #24	ENSPSMG00000023385 #24	ENSPSMG00000023390 #22	SDR9C7 (ENSPSMG00000023397) #23	HSD17B6 (ENSPSMG00000023411) #24	ENSPSMG00000023416	PRIM1 (ENSPSMG00000023427) #25	ENSPSMG00000023464 #26	ENSPSMG00000023507 #27	ENSPSMG00000023515	ATP5F1B (ENSPSMG00000023521) #28	BAZ2A (ENSPSMG00000023555) #29	RBMS2 (ENSPSMG00000023596) #30	GLS2 (ENSPSMG00000023676) #32	SPRYD4 (ENSPSMG00000023714) #33
Greater bamboo lemur	MODERN SPECIES	128	INHBE (ENSPSMG00000022816)	INHBC (ENSPSMG00000022819)	R3HDM2 (ENSPSMG00000023044) #8	STAC3 (ENSPSMG00000023166) #9	NDUFA4L2 (ENSPSMG00000023172) #10	SHMT2 (ENSPSMG00000023192) #11	NXPH4 (ENSPSMG00000023199) #12	LRP1 (ENSPSMG00000023233) #13	STAT6 (ENSPSMG00000023272) #14	NAB2 (ENSPSMG00000023295) #15	NEMP1 (ENSPSMG00000023310) #16	MYO1A (ENSPSMG00000023326) #17	TAC3 (ENSPSMG00000023334) #18	ZBTB39 (ENSPSMG00000023342) #19	GPR182 (ENSPSMG00000023346) #21	ENSPSMG00000023352 #22	ENSPSMG00000023358	ENSPSMG00000023363 #24	ENSPSMG00000023371 #22	ENSPSMG00000023379 #24	ENSPSMG00000023385 #24	ENSPSMG00000023390 #22	SDR9C7 (ENSPSMG00000023397) #23	HSD17B6 (ENSPSMG00000023411) #24	ENSPSMG00000023416	PRIM1 (ENSPSMG00000023427) #25	ENSPSMG00000023464 #26	ENSPSMG00000023507 #27	ENSPSMG00000023515	ATP5F1B (ENSPSMG00000023521) #28	BAZ2A (ENSPSMG00000023555) #29
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00940000154118.b.mb #22
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT00940000154118.b.mb #22
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	91	GLI1 (ENSPCOG00000017480)	INHBE (ENSPCOG00000013151)	INHBC (ENSPCOG00000019052)	R3HDM2 (ENSPCOG00000013201) #8	STAC3 (ENSPCOG00000027812) #9	NDUFA4L2 (ENSPCOG00000019477) #10	SHMT2 (ENSPCOG00000024293) #11	NXPH4 (ENSPCOG00000016192) #12	LRP1 (ENSPCOG00000028198) #13	STAT6 (ENSPCOG00000014408) #14	NAB2 (ENSPCOG00000016530) #15	NEMP1 (ENSPCOG00000016183) #16	MYO1A (ENSPCOG00000015135) #17	TAC3 (ENSPCOG00000028599) #18	ENSPCOG00000016062 #22	ENSPCOG00000020017 #22	SDR9C7 (ENSPCOG00000016103) #23	HSD17B6 (ENSPCOG00000016115) #24	ENSPCOG00000019425	PRIM1 (ENSPCOG00000027734) #25	ENSPCOG00000024750 #26	PTGES3 (ENSPCOG00000028246) #27	ATP5F1B (ENSPCOG00000016499) #28	BAZ2A (ENSPCOG00000017805) #29	ENSPCOG00000016699 #30	GLS2 (ENSPCOG00000019018) #32	SPRYD4 (ENSPCOG00000015229) #33	MIP (ENSPCOG00000020082) #34	TIMELESS (ENSPCOG00000018817) #35	APOF (ENSPCOG00000015999) #36	STAT2 (ENSPCOG00000016628) #37
Coquerels sifaka	MODERN SPECIES	91	ARHGAP9 (ENSPCOG00000019995)	GLI1 (ENSPCOG00000017480)	INHBE (ENSPCOG00000013151)	INHBC (ENSPCOG00000019052)	R3HDM2 (ENSPCOG00000013201) #8	STAC3 (ENSPCOG00000027812) #9	NDUFA4L2 (ENSPCOG00000019477) #10	SHMT2 (ENSPCOG00000024293) #11	NXPH4 (ENSPCOG00000016192) #12	LRP1 (ENSPCOG00000028198) #13	STAT6 (ENSPCOG00000014408) #14	NAB2 (ENSPCOG00000016530) #15	NEMP1 (ENSPCOG00000016183) #16	MYO1A (ENSPCOG00000015135) #17	TAC3 (ENSPCOG00000028599) #18	ENSPCOG00000016062 #22	ENSPCOG00000020017 #22	SDR9C7 (ENSPCOG00000016103) #23	HSD17B6 (ENSPCOG00000016115) #24	ENSPCOG00000019425	PRIM1 (ENSPCOG00000027734) #25	ENSPCOG00000024750 #26	PTGES3 (ENSPCOG00000028246) #27	ATP5F1B (ENSPCOG00000016499) #28	BAZ2A (ENSPCOG00000017805) #29	ENSPCOG00000016699 #30	GLS2 (ENSPCOG00000019018) #32	SPRYD4 (ENSPCOG00000015229) #33	MIP (ENSPCOG00000020082) #34	TIMELESS (ENSPCOG00000018817) #35	APOF (ENSPCOG00000015999) #36
Mouse lemur	MODERN SPECIES	29	IL22 (ENSMICG00000003654)	MDM1 (ENSMICG00000003661)	RAP1B (ENSMICG00000013148)	NUP107 (ENSMICG00000013152)	SLC35E3 (ENSMICG00000029927)	C12orf40 (ENSMICG00000013199)	ABCD2 (ENSMICG00000033054)	KIF21A (ENSMICG00000013145)	CPNE8 (ENSMICG00000017464)	ENSMICG00000029831	ENSMICG00000005398	SYT10 (ENSMICG00000010299)	ENSMICG00000037631	ENSMICG00000047187 #22	ENSMICG00000047530 #22	ENSMICG00000047394 #22	ENSMICG00000037040	SDR9C7 (ENSMICG00000041509) #23	HSD17B6 (ENSMICG00000043569) #24	ENSMICG00000045041	ENSMICG00000036736	PRIM1 (ENSMICG00000006060) #25	ENSMICG00000036539 #26	PTGES3 (ENSMICG00000001086) #27	ENSMICG00000045771 #28	BAZ2A (ENSMICG00000001077) #29	RBMS2 (ENSMICG00000001075) #30	GLS2 (ENSMICG00000010158) #32	SPRYD4 (ENSMICG00000042006) #33	MIP (ENSMICG00000027583) #34	TIMELESS (ENSMICG00000000094) #35
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Tree shrew	MODERN SPECIES	10465																RDH16 (ENSTBEG00000015696) #22	SDR9C7 (ENSTBEG00000015595) #23
Glires	ANCESTRAL SPECIES	4	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Guinea pig	MODERN SPECIES	9	GLI1 (ENSCPOG00000005414)	INHBE (ENSCPOG00000031115)	INHBC (ENSCPOG00000033593)	R3HDM2 (ENSCPOG00000009217) #8	STAC3 (ENSCPOG00000006200) #9	NDUFA4L2 (ENSCPOG00000035802) #10	SHMT2 (ENSCPOG00000012840) #11	LRP1 (ENSCPOG00000031730) #13	STAT6 (ENSCPOG00000012941) #14	NAB2 (ENSCPOG00000012940) #15	NEMP1 (ENSCPOG00000034078) #16	MYO1A (ENSCPOG00000012927) #17	TAC3 (ENSCPOG00000012924) #18	ZBTB39 (ENSCPOG00000035858) #19	GPR182 (ENSCPOG00000022599) #21	RDH16 (ENSCPOG00000002833) #22	SDR9C7 (ENSCPOG00000040671) #23	ENSCPOG00000002890 #24	ENSCPOG00000006822 #24	PRIM1 (ENSCPOG00000024424) #25	ENSCPOG00000012654 #26	PTGES3 (ENSCPOG00000000057) #27	ATP5F1B (ENSCPOG00000023092) #28	BAZ2A (ENSCPOG00000006404) #29	RBMS2 (ENSCPOG00000008256) #30	GLS2 (ENSCPOG00000002352) #32	SPRYD4 (ENSCPOG00000002349) #33	MIP (ENSCPOG00000002347) #34	TIMELESS (ENSCPOG00000002338) #35	APOF (ENSCPOG00000014939) #36	STAT2 (ENSCPOG00000014930) #37
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.jb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	165	NDUFA4L2 (ENSCLAG00000017351) #10	SHMT2 (ENSCLAG00000014378) #11	NXPH4 (ENSCLAG00000016280) #12	LRP1 (ENSCLAG00000011741) #13	STAT6 (ENSCLAG00000011587) #14	NAB2 (ENSCLAG00000009310) #15	NEMP1 (ENSCLAG00000011169) #16	MYO1A (ENSCLAG00000009254) #17	TAC3 (ENSCLAG00000014146) #18	ZBTB39 (ENSCLAG00000012800) #19	GPR182 (ENSCLAG00000012163) #21	ENSCLAG00000009985 #22	ENSCLAG00000012992 #24	ENSCLAG00000011030 #22	ENSCLAG00000013334 #22	ENSCLAG00000012956 #22	SDR9C7 (ENSCLAG00000009483) #23	ENSCLAG00000013306 #24	PRIM1 (ENSCLAG00000010248) #25	Naca (ENSCLAG00000013441) #26	ENSCLAG00000013717 #27	ATP5F1B (ENSCLAG00000011615) #28	BAZ2A (ENSCLAG00000010711) #29	RBMS2 (ENSCLAG00000012661) #30	SPRYD4 (ENSCLAG00000013017) #33	GLS2 (ENSCLAG00000009741) #32	MIP (ENSCLAG00000009467) #34	TIMELESS (ENSCLAG00000012850) #35	APOF (ENSCLAG00000017022) #36	STAT2 (ENSCLAG00000012105) #37	IL23A (ENSCLAG00000011380)
Long-tailed chinchilla	MODERN SPECIES	165	STAC3 (ENSCLAG00000017371) #9	NDUFA4L2 (ENSCLAG00000017351) #10	SHMT2 (ENSCLAG00000014378) #11	NXPH4 (ENSCLAG00000016280) #12	LRP1 (ENSCLAG00000011741) #13	STAT6 (ENSCLAG00000011587) #14	NAB2 (ENSCLAG00000009310) #15	NEMP1 (ENSCLAG00000011169) #16	MYO1A (ENSCLAG00000009254) #17	TAC3 (ENSCLAG00000014146) #18	ZBTB39 (ENSCLAG00000012800) #19	GPR182 (ENSCLAG00000012163) #21	ENSCLAG00000009985 #22	ENSCLAG00000012992 #24	ENSCLAG00000011030 #22	ENSCLAG00000013334 #22	ENSCLAG00000012956 #22	SDR9C7 (ENSCLAG00000009483) #23	ENSCLAG00000013306 #24	PRIM1 (ENSCLAG00000010248) #25	Naca (ENSCLAG00000013441) #26	ENSCLAG00000013717 #27	ATP5F1B (ENSCLAG00000011615) #28	BAZ2A (ENSCLAG00000010711) #29	RBMS2 (ENSCLAG00000012661) #30	SPRYD4 (ENSCLAG00000013017) #33	GLS2 (ENSCLAG00000009741) #32	MIP (ENSCLAG00000009467) #34	TIMELESS (ENSCLAG00000012850) #35	APOF (ENSCLAG00000017022) #36	STAT2 (ENSCLAG00000012105) #37
Long-tailed chinchilla	MODERN SPECIES	165	INHBE (ENSCLAG00000013199)	INHBC (ENSCLAG00000015051)	R3HDM2 (ENSCLAG00000011997) #8	STAC3 (ENSCLAG00000017371) #9	NDUFA4L2 (ENSCLAG00000017351) #10	SHMT2 (ENSCLAG00000014378) #11	NXPH4 (ENSCLAG00000016280) #12	LRP1 (ENSCLAG00000011741) #13	STAT6 (ENSCLAG00000011587) #14	NAB2 (ENSCLAG00000009310) #15	NEMP1 (ENSCLAG00000011169) #16	MYO1A (ENSCLAG00000009254) #17	TAC3 (ENSCLAG00000014146) #18	ZBTB39 (ENSCLAG00000012800) #19	GPR182 (ENSCLAG00000012163) #21	ENSCLAG00000009985 #22	ENSCLAG00000012992 #24	ENSCLAG00000011030 #22	ENSCLAG00000013334 #22	ENSCLAG00000012956 #22	SDR9C7 (ENSCLAG00000009483) #23	ENSCLAG00000013306 #24	PRIM1 (ENSCLAG00000010248) #25	Naca (ENSCLAG00000013441) #26	ENSCLAG00000013717 #27	ATP5F1B (ENSCLAG00000011615) #28	BAZ2A (ENSCLAG00000010711) #29	RBMS2 (ENSCLAG00000012661) #30	SPRYD4 (ENSCLAG00000013017) #33	GLS2 (ENSCLAG00000009741) #32	MIP (ENSCLAG00000009467) #34
Long-tailed chinchilla	MODERN SPECIES	165	R3HDM2 (ENSCLAG00000011997) #8	STAC3 (ENSCLAG00000017371) #9	NDUFA4L2 (ENSCLAG00000017351) #10	SHMT2 (ENSCLAG00000014378) #11	NXPH4 (ENSCLAG00000016280) #12	LRP1 (ENSCLAG00000011741) #13	STAT6 (ENSCLAG00000011587) #14	NAB2 (ENSCLAG00000009310) #15	NEMP1 (ENSCLAG00000011169) #16	MYO1A (ENSCLAG00000009254) #17	TAC3 (ENSCLAG00000014146) #18	ZBTB39 (ENSCLAG00000012800) #19	GPR182 (ENSCLAG00000012163) #21	ENSCLAG00000009985 #22	ENSCLAG00000012992 #24	ENSCLAG00000011030 #22	ENSCLAG00000013334 #22	ENSCLAG00000012956 #22	SDR9C7 (ENSCLAG00000009483) #23	ENSCLAG00000013306 #24	PRIM1 (ENSCLAG00000010248) #25	Naca (ENSCLAG00000013441) #26	ENSCLAG00000013717 #27	ATP5F1B (ENSCLAG00000011615) #28	BAZ2A (ENSCLAG00000010711) #29	RBMS2 (ENSCLAG00000012661) #30	SPRYD4 (ENSCLAG00000013017) #33	GLS2 (ENSCLAG00000009741) #32	MIP (ENSCLAG00000009467) #34	TIMELESS (ENSCLAG00000012850) #35	APOF (ENSCLAG00000017022) #36
Degu	DUPLICATION
Degu	MODERN SPECIES	327	ENSODEG00000001478	STAC3 (ENSODEG00000001424) #9	NDUFA4L2 (ENSODEG00000002560) #10	ENSODEG00000002538 #11	NXPH4 (ENSODEG00000002515) #12	LRP1 (ENSODEG00000002173) #13	STAT6 (ENSODEG00000001929) #14	NAB2 (ENSODEG00000001905) #15	NEMP1 (ENSODEG00000001860) #16	ENSODEG00000018785	MYO1A (ENSODEG00000001774) #17	TAC3 (ENSODEG00000001740) #18	GPR182 (ENSODEG00000001727) #21	ENSODEG00000001707 #22	ENSODEG00000001681	ENSODEG00000001656 #22	ENSODEG00000001645 #23	ENSODEG00000001623 #23	ENSODEG00000001610	ENSODEG00000001597	ENSODEG00000001581
Degu	MODERN SPECIES	327	ENSODEG00000001512	ENSODEG00000001494 #8	ENSODEG00000001478	STAC3 (ENSODEG00000001424) #9	NDUFA4L2 (ENSODEG00000002560) #10	ENSODEG00000002538 #11	NXPH4 (ENSODEG00000002515) #12	LRP1 (ENSODEG00000002173) #13	STAT6 (ENSODEG00000001929) #14	NAB2 (ENSODEG00000001905) #15	NEMP1 (ENSODEG00000001860) #16	ENSODEG00000018785	MYO1A (ENSODEG00000001774) #17	TAC3 (ENSODEG00000001740) #18	GPR182 (ENSODEG00000001727) #21	ENSODEG00000001707 #22	ENSODEG00000001681	ENSODEG00000001656 #22	ENSODEG00000001645 #23	ENSODEG00000001623 #23	ENSODEG00000001610	ENSODEG00000001597	ENSODEG00000001581
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	8	MARS1 (ENSHGLG00000013493)	INHBE (ENSHGLG00000032463)	ENSHGLG00000042046	NDUFA4L2 (ENSHGLG00000045559) #10	ENSHGLG00000050142 #11	ENSHGLG00000039328 #12	ENSHGLG00000043481	ENSHGLG00000050903	STAT6 (ENSHGLG00000018890) #14	NAB2 (ENSHGLG00000046085) #15	TMEM194A (ENSHGLG00000050319) #16	MYO1A (ENSHGLG00000016942) #17	TAC3 (ENSHGLG00000045829) #18	ZBTB39 (ENSHGLG00000040796) #19	ENSHGLG00000017107 #22	ENSHGLG00000015298 #22	SDR9C7 (ENSHGLG00000015339) #23	ENSHGLG00000041982 #24	HSD17B6 (ENSHGLG00000016546) #24	ENSHGLG00000045594 #24	ENSHGLG00000049699	PRIM1 (ENSHGLG00000034649) #25	ENSHGLG00000006553 ##26	PTGES3 (ENSHGLG00000033363) #27	ATP5F1B (ENSHGLG00000006040) #28	ENSHGLG00000032509 #29	RBMS2 (ENSHGLG00000018238) #30	GLS2 (ENSHGLG00000013406) #32	SPRYD4 (ENSHGLG00000016750) #33	MIP (ENSHGLG00000016789) #34	TIMELESS (ENSHGLG00000016404) #35
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000041807	MARS1 (ENSHGLG00000013493)	INHBE (ENSHGLG00000032463)	ENSHGLG00000042046	NDUFA4L2 (ENSHGLG00000045559) #10	ENSHGLG00000050142 #11	ENSHGLG00000039328 #12	ENSHGLG00000043481	ENSHGLG00000050903	STAT6 (ENSHGLG00000018890) #14	NAB2 (ENSHGLG00000046085) #15	TMEM194A (ENSHGLG00000050319) #16	MYO1A (ENSHGLG00000016942) #17	TAC3 (ENSHGLG00000045829) #18	ZBTB39 (ENSHGLG00000040796) #19	ENSHGLG00000017107 #22	ENSHGLG00000015298 #22	SDR9C7 (ENSHGLG00000015339) #23	ENSHGLG00000041982 #24	HSD17B6 (ENSHGLG00000016546) #24	ENSHGLG00000045594 #24	ENSHGLG00000049699	PRIM1 (ENSHGLG00000034649) #25	ENSHGLG00000006553 ##26	PTGES3 (ENSHGLG00000033363) #27	ATP5F1B (ENSHGLG00000006040) #28	ENSHGLG00000032509 #29	RBMS2 (ENSHGLG00000018238) #30	GLS2 (ENSHGLG00000013406) #32	SPRYD4 (ENSHGLG00000016750) #33	MIP (ENSHGLG00000016789) #34
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800.ob #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000160235	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.ob #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Arctic ground squirrel	MODERN SPECIES	197	ARHGAP9 (ENSUPAG00010017207)	INHBE (ENSUPAG00010017202)	INHBC (ENSUPAG00010017199)	R3HDM2 (ENSUPAG00010016815) #8	STAC3 (ENSUPAG00010016748) #9	SHMT2 (ENSUPAG00010016720) #11	NXPH4 (ENSUPAG00010016712) #12	LRP1 (ENSUPAG00010016565) #13	STAT6 (ENSUPAG00010016543) #14	NAB2 (ENSUPAG00010016528) #15	NEMP1 (ENSUPAG00010016506) #16	MYO1A (ENSUPAG00010016464) #17	TAC3 (ENSUPAG00010016446) #18	ZBTB39 (ENSUPAG00010016442) #19	GPR182 (ENSUPAG00010016435) #21	RDH16 (ENSUPAG00010016427) #22	SDR9C7 (ENSUPAG00010016416) #23	PRIM1 (ENSUPAG00010016373) #25	ENSUPAG00010016347 ##26	PTGES3 (ENSUPAG00010016328) #27	ATP5F1B (ENSUPAG00010016293) #28	BAZ2A (ENSUPAG00010016135) #29	RBMS2 (ENSUPAG00010016103) #30	GLS2 (ENSUPAG00010016072) #32	SPRYD4 (ENSUPAG00010016065) #33	MIP (ENSUPAG00010016061) #34	TIMELESS (ENSUPAG00010015979) #35	ENSUPAG00010015975 ##36	APOF (ENSUPAG00010015964) #36	STAT2 (ENSUPAG00010015949) #37	IL23A (ENSUPAG00010015944)
Squirrel	MODERN SPECIES	246	GLI1 (ENSSTOG00000020366)	INHBE (ENSSTOG00000025066)	INHBC (ENSSTOG00000001097)	ENSSTOG00000013424 #8	STAC3 (ENSSTOG00000013409) #9	SHMT2 (ENSSTOG00000013388) #11	NXPH4 (ENSSTOG00000024980) #12	LRP1 (ENSSTOG00000013305) #13	STAT6 (ENSSTOG00000013280) #14	NAB2 (ENSSTOG00000020459) #15	NEMP1 (ENSSTOG00000012331) #16	MYO1A (ENSSTOG00000012304) #17	TAC3 (ENSSTOG00000012292) #18	ZBTB39 (ENSSTOG00000012284) #19	GPR182 (ENSSTOG00000020264) #21	RDH16 (ENSSTOG00000021331) #22	SDR9C7 (ENSSTOG00000026458) #23	PRIM1 (ENSSTOG00000009049) #25	ENSSTOG00000009028 #26	ENSSTOG00000030668 #27	ENSSTOG00000013882 #28	BAZ2A (ENSSTOG00000013452) #29	RBMS2 (ENSSTOG00000013442) #30	GLS2 (ENSSTOG00000020896) #32	SPRYD4 (ENSSTOG00000024949) #33	MIP (ENSSTOG00000002295) #34	TIMELESS (ENSSTOG00000014170) #35	STAT2 (ENSSTOG00000015985) #37	IL23A (ENSSTOG00000015981)	PAN2 (ENSSTOG00000015974)	CNPY2 (ENSSTOG00000015971)
Alpin marmot	MODERN SPECIES	11	INHBC (ENSMMMG00000011180)	R3HDM2 (ENSMMMG00000011206) #8	STAC3 (ENSMMMG00000012741) #9	NDUFA4L2 (ENSMMMG00000012770) #10	ENSMMMG00000012783	SHMT2 (ENSMMMG00000012788) #11	NXPH4 (ENSMMMG00000012812) #12	LRP1 (ENSMMMG00000012817) #13	STAT6 (ENSMMMG00000012942) #14	NAB2 (ENSMMMG00000012959) #15	NEMP1 (ENSMMMG00000012998) #16	MYO1A (ENSMMMG00000013029) #17	TAC3 (ENSMMMG00000013065) #18	ZBTB39 (ENSMMMG00000013072) #19	GPR182 (ENSMMMG00000013074) #21	RDH16 (ENSMMMG00000013078) #22	SDR9C7 (ENSMMMG00000013089) #23	ENSMMMG00000013092	PRIM1 (ENSMMMG00000013128) #25	ENSMMMG00000013160 ##26	PTGES3 (ENSMMMG00000013173) #27	ATP5F1B (ENSMMMG00000013206) #28	BAZ2A (ENSMMMG00000013218) #29	RBMS2 (ENSMMMG00000013350) #30	GLS2 (ENSMMMG00000013386) #32	SPRYD4 (ENSMMMG00000013401) #33	MIP (ENSMMMG00000013405) #34	TIMELESS (ENSMMMG00000013421) #35	ENSMMMG00000013511 ##36	APOF (ENSMMMG00000013515) #36	STAT2 (ENSMMMG00000013531) #37
Eurasian red squirrel	MODERN SPECIES	14	INHBE (ENSSVLG00005011485)	INHBC (ENSSVLG00005011429)	R3HDM2 (ENSSVLG00005011028) #8	STAC3 (ENSSVLG00005010688) #9	NDUFA4L2 (ENSSVLG00005010637) #10	SHMT2 (ENSSVLG00005010562) #11	NXPH4 (ENSSVLG00005010530) #12	LRP1 (ENSSVLG00005009995) #13	STAT6 (ENSSVLG00005009880) #14	NAB2 (ENSSVLG00005009807) #15	NEMP1 (ENSSVLG00005009668) #16	MYO1A (ENSSVLG00005009487) #17	TAC3 (ENSSVLG00005009429) #18	ZBTB39 (ENSSVLG00005009416) #19	GPR182 (ENSSVLG00005009407) #21	RDH16 (ENSSVLG00005009375) #22	ENSSVLG00005009344 #23	ENSSVLG00005009281 #23	ENSSVLG00005009263	ENSSVLG00005009223	ENSSVLG00005009208	ENSSVLG00005009127 #25	ENSSVLG00005009065 #26	PTGES3 (ENSSVLG00005008976) #27	ATP5F1B (ENSSVLG00005008891) #28	BAZ2A (ENSSVLG00005008631) #29	RBMS2 (ENSSVLG00005008523) #30	GLS2 (ENSSVLG00005008285) #32	ENSSVLG00005008222 #33	MIP (ENSSVLG00005008182) #34	TIMELESS (ENSSVLG00005007872) #35
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Cricetinae	DUPLICATION
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.q #22	ENSGT00940000154118.b.r #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	352	Inhbc (ENSCGRG00001017014)	R3hdm2 (ENSCGRG00001017324) #8	Stac3 (ENSCGRG00001021668) #9	Ndufa4l2 (ENSCGRG00001021531) #10	Shmt2 (ENSCGRG00001018472) #11	Nxph4 (ENSCGRG00001014648) #12	Lrp1 (ENSCGRG00001011627) #13	ENSCGRG00001002945	Stat6 (ENSCGRG00001020526) #14	Nab2 (ENSCGRG00001018114) #15	Nemp1 (ENSCGRG00001014268) #16	Myo1a (ENSCGRG00001005373) #17	Tac2 (ENSCGRG00001014061) #18	Zbtb39 (ENSCGRG00001001407) #19	Gpr182 (ENSCGRG00001011877) #21	ENSCGRG00001016912 #22	ENSCGRG00001003209 #22	ENSCGRG00001023626 #22	Sdr9c7 (ENSCGRG00001014788) #23	Hsd17b6 (ENSCGRG00001003931) #24	Prim1 (ENSCGRG00001022266) #25	ENSCGRG00001019512 ##26	Ptges3 (ENSCGRG00001015638) #27	Atp5b (ENSCGRG00001017195) #28	Baz2a (ENSCGRG00001005683) #29	Rbms2 (ENSCGRG00001023923) #30	Gls2 (ENSCGRG00001012770) #32	Spryd4 (ENSCGRG00001016587) #33	Mip (ENSCGRG00001020147) #34	Timeless (ENSCGRG00001012271) #35	ENSCGRG00001001978 ##36
Chinese hamster chok1gshd	MODERN SPECIES	352	R3hdm2 (ENSCGRG00001017324) #8	Stac3 (ENSCGRG00001021668) #9	Ndufa4l2 (ENSCGRG00001021531) #10	Shmt2 (ENSCGRG00001018472) #11	Nxph4 (ENSCGRG00001014648) #12	Lrp1 (ENSCGRG00001011627) #13	ENSCGRG00001002945	Stat6 (ENSCGRG00001020526) #14	Nab2 (ENSCGRG00001018114) #15	Nemp1 (ENSCGRG00001014268) #16	Myo1a (ENSCGRG00001005373) #17	Tac2 (ENSCGRG00001014061) #18	Zbtb39 (ENSCGRG00001001407) #19	Gpr182 (ENSCGRG00001011877) #21	ENSCGRG00001016912 #22	ENSCGRG00001003209 #22	ENSCGRG00001023626 #22	Sdr9c7 (ENSCGRG00001014788) #23	Hsd17b6 (ENSCGRG00001003931) #24	Prim1 (ENSCGRG00001022266) #25	ENSCGRG00001019512 ##26	Ptges3 (ENSCGRG00001015638) #27	Atp5b (ENSCGRG00001017195) #28	Baz2a (ENSCGRG00001005683) #29	Rbms2 (ENSCGRG00001023923) #30	Gls2 (ENSCGRG00001012770) #32	Spryd4 (ENSCGRG00001016587) #33	Mip (ENSCGRG00001020147) #34	Timeless (ENSCGRG00001012271) #35	ENSCGRG00001001978 ##36	Apof (ENSCGRG00001021570) #36
Cricetinae	ANCESTRAL SPECIES	22	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.b ##26	ENSGT00390000011466 #25	ENSGT00940000162028 #24	ENSGT00940000161764 #23	ENSGT00940000154118.b.r #22	ENSGT00940000154118.b.q #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9	ENSGT00940000155609 #8	ENSGT00940000160065
Chinese hamster chok1gshd	MODERN SPECIES	352	Stat2 (ENSCGRG00001011774) #37	Apof (ENSCGRG00001021570) #36	ENSCGRG00001001978 ##36	Timeless (ENSCGRG00001012271) #35	Mip (ENSCGRG00001020147) #34	Spryd4 (ENSCGRG00001016587) #33	Gls2 (ENSCGRG00001012770) #32	Rbms2 (ENSCGRG00001023923) #30	Baz2a (ENSCGRG00001005683) #29	Atp5b (ENSCGRG00001017195) #28	Ptges3 (ENSCGRG00001015638) #27	ENSCGRG00001019512 ##26	Prim1 (ENSCGRG00001022266) #25	Hsd17b6 (ENSCGRG00001003931) #24	Sdr9c7 (ENSCGRG00001014788) #23	ENSCGRG00001023626 #22	ENSCGRG00001003209 #22	ENSCGRG00001016912 #22	Gpr182 (ENSCGRG00001011877) #21	Zbtb39 (ENSCGRG00001001407) #19	Tac2 (ENSCGRG00001014061) #18	Myo1a (ENSCGRG00001005373) #17	Nemp1 (ENSCGRG00001014268) #16	Nab2 (ENSCGRG00001018114) #15	Stat6 (ENSCGRG00001020526) #14	ENSCGRG00001002945	Lrp1 (ENSCGRG00001011627) #13	Nxph4 (ENSCGRG00001014648) #12	Shmt2 (ENSCGRG00001018472) #11	Ndufa4l2 (ENSCGRG00001021531) #10	Stac3 (ENSCGRG00001021668) #9
Golden Hamster	MODERN SPECIES	710	Cnpy2 (ENSMAUG00000001150)	Pan2 (ENSMAUG00000012602)	Il23a (ENSMAUG00000011310)	Stat2 (ENSMAUG00000012842) #37	Apof (ENSMAUG00000017165) #36	ENSMAUG00000010695 #35	Mip (ENSMAUG00000012086) #34	Spryd4 (ENSMAUG00000018363) #33	Gls2 (ENSMAUG00000019243) #32	ENSMAUG00000016984 #30	Baz2a (ENSMAUG00000020341) #29	Ptges3 (ENSMAUG00000016336) #27	ENSMAUG00000015543 ##26	Prim1 (ENSMAUG00000008749) #25	Sdr9c7 (ENSMAUG00000007487) #23	ENSMAUG00000016734 #22	Gpr182 (ENSMAUG00000015199) #21	Zbtb39 (ENSMAUG00000017199) #19	Tac2 (ENSMAUG00000018582) #18	Myo1a (ENSMAUG00000018930) #17	Nemp1 (ENSMAUG00000004172) #16	Nab2 (ENSMAUG00000004697) #15	Stat6 (ENSMAUG00000000383) #14	Lrp1 (ENSMAUG00000009058) #13	Nxph4 (ENSMAUG00000010802) #12	Shmt2 (ENSMAUG00000014511) #11	ENSMAUG00000016907	Stac3 (ENSMAUG00000017379) #9	ENSMAUG00000012480	Inhbc (ENSMAUG00000013085)	Inhbe (ENSMAUG00000008071)
Cricetidae_B	ANCESTRAL SPECIES	35	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	350	Dlx5 (ENSMOCG00000021591)	Sdhaf3 (ENSMOCG00000004621)	Tac1 (ENSMOCG00000014686)	Asns (ENSMOCG00000011530)	C1galt1 (ENSMOCG00000009499)	Col28a1 (ENSMOCG00000012197)	Mios (ENSMOCG00000017559)	Rpa3 (ENSMOCG00000011090)	Umad1 (ENSMOCG00000016635)	Glcci1 (ENSMOCG00000011098)	ENSMOCG00000019705	ENSMOCG00000008517	Nxph1 (ENSMOCG00000015073) ##12	Ndufa4 (ENSMOCG00000021704)	Phf14 (ENSMOCG00000016636)	ENSMOCG00000008159 #22	Thsd7a (ENSMOCG00000019383)	ENSMOCG00000019332	Tmem106b (ENSMOCG00000019810)	ENSMOCG00000008088	ENSMOCG00000010148	ENSMOCG00000014014	Tmem168 (ENSMOCG00000016323)	Bmt2 (ENSMOCG00000003495)	Gpr85 (ENSMOCG00000007052)	Ppp1r3a (ENSMOCG00000007450)	Foxp2 (ENSMOCG00000018674)	Mdfic (ENSMOCG00000014159)	ENSMOCG00000018404	ENSMOCG00000002194	Tfec (ENSMOCG00000021582)
Prairie vole	MODERN SPECIES	10	R3hdm2 (ENSMOCG00000014425) #8	Stac3 (ENSMOCG00000014255) #9	Ndufa4l2 (ENSMOCG00000005415) #10	Shmt2 (ENSMOCG00000006177) #11	Nxph4 (ENSMOCG00000020468) #12	ENSMOCG00000000670 #13	ENSMOCG00000021063	Stat6 (ENSMOCG00000003830) #14	Nab2 (ENSMOCG00000020714) #15	Nemp1 (ENSMOCG00000011584) #16	Myo1a (ENSMOCG00000011760) #17	Tac2 (ENSMOCG00000000889) #18	Zbtb39 (ENSMOCG00000001699) #19	Gpr182 (ENSMOCG00000017417) #21	ENSMOCG00000020549 #22	ENSMOCG00000011639 #22	ENSMOCG00000005192	ENSMOCG00000012771	Neurod4 (ENSMOCG00000010116)	Tespa1 (ENSMOCG00000011978)	Yeats4 (ENSMOCG00000017260)	Frs2 (ENSMOCG00000012695)	Cct2 (ENSMOCG00000001863)	ENSMOCG00000008051	Best3 (ENSMOCG00000012175)	ENSMOCG00000000389	Myrfl (ENSMOCG00000019020)	Cnot2 (ENSMOCG00000011255)	Kcnmb4 (ENSMOCG00000002276)	Ptprb (ENSMOCG00000009646)	Ptprr (ENSMOCG00000016397)
Prairie vole	MODERN SPECIES	10	Inhbc (ENSMOCG00000001463)	R3hdm2 (ENSMOCG00000014425) #8	Stac3 (ENSMOCG00000014255) #9	Ndufa4l2 (ENSMOCG00000005415) #10	Shmt2 (ENSMOCG00000006177) #11	Nxph4 (ENSMOCG00000020468) #12	ENSMOCG00000000670 #13	ENSMOCG00000021063	Stat6 (ENSMOCG00000003830) #14	Nab2 (ENSMOCG00000020714) #15	Nemp1 (ENSMOCG00000011584) #16	Myo1a (ENSMOCG00000011760) #17	Tac2 (ENSMOCG00000000889) #18	Zbtb39 (ENSMOCG00000001699) #19	Gpr182 (ENSMOCG00000017417) #21	ENSMOCG00000020549 #22	ENSMOCG00000011639 #22	ENSMOCG00000005192	ENSMOCG00000012771	Neurod4 (ENSMOCG00000010116)	Tespa1 (ENSMOCG00000011978)	Yeats4 (ENSMOCG00000017260)	Frs2 (ENSMOCG00000012695)	Cct2 (ENSMOCG00000001863)	ENSMOCG00000008051	Best3 (ENSMOCG00000012175)	ENSMOCG00000000389	Myrfl (ENSMOCG00000019020)	Cnot2 (ENSMOCG00000011255)	Kcnmb4 (ENSMOCG00000002276)	Ptprb (ENSMOCG00000009646)
Northern American deer mouse	DUPLICATION
Northern American deer mouse	DUPLICATION
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	9	Tespa1 (ENSPEMG00000023928)	ENSPEMG00000031146 ##36	Timeless (ENSPEMG00000017944) #35	Mip (ENSPEMG00000014379) #34	Spryd4 (ENSPEMG00000029549) #33	Gls2 (ENSPEMG00000013787) #32	Rbms2 (ENSPEMG00000012948) #30	Baz2a (ENSPEMG00000018987) #29	Atp5b (ENSPEMG00000013983) #28	Ptges3 (ENSPEMG00000010029) #27	ENSPEMG00000005647 ##26	Prim1 (ENSPEMG00000011486) #25	Hsd17b6 (ENSPEMG00000009978) #24	Sdr9c7 (ENSPEMG00000023090) #23	ENSPEMG00000025710 #22	ENSPEMG00000025627 #22	ENSPEMG00000025685 #22	ENSPEMG00000029591 #22	ENSPEMG00000030154 #22	ENSPEMG00000008778 #22	Gpr182 (ENSPEMG00000012025) #21	Zbtb39 (ENSPEMG00000001529) #19	Tac2 (ENSPEMG00000007115) #18	Myo1a (ENSPEMG00000018549) #17	Nemp1 (ENSPEMG00000000349) #16	Nab2 (ENSPEMG00000003067) #15	Stat6 (ENSPEMG00000006873) #14	Lrp1 (ENSPEMG00000015988) #13	Nxph4 (ENSPEMG00000014406) #12	Shmt2 (ENSPEMG00000015669) #11	Ndufa4l2 (ENSPEMG00000025310) #10
Northern American deer mouse	MODERN SPECIES	9	Inhbe (ENSPEMG00000028054)	Inhbc (ENSPEMG00000017942)	R3hdm2 (ENSPEMG00000015964) #8	Stac3 (ENSPEMG00000016520) #9	Ndufa4l2 (ENSPEMG00000025310) #10	Shmt2 (ENSPEMG00000015669) #11	Nxph4 (ENSPEMG00000014406) #12	Lrp1 (ENSPEMG00000015988) #13	Stat6 (ENSPEMG00000006873) #14	Nab2 (ENSPEMG00000003067) #15	Nemp1 (ENSPEMG00000000349) #16	Myo1a (ENSPEMG00000018549) #17	Tac2 (ENSPEMG00000007115) #18	Zbtb39 (ENSPEMG00000001529) #19	Gpr182 (ENSPEMG00000012025) #21	ENSPEMG00000008778 #22	ENSPEMG00000030154 #22	ENSPEMG00000029591 #22	ENSPEMG00000025685 #22	ENSPEMG00000025627 #22	ENSPEMG00000025710 #22	Sdr9c7 (ENSPEMG00000023090) #23	Hsd17b6 (ENSPEMG00000009978) #24	Prim1 (ENSPEMG00000011486) #25	ENSPEMG00000005647 ##26	Ptges3 (ENSPEMG00000010029) #27	Atp5b (ENSPEMG00000013983) #28	Baz2a (ENSPEMG00000018987) #29	Rbms2 (ENSPEMG00000012948) #30	Gls2 (ENSPEMG00000013787) #32	Spryd4 (ENSPEMG00000029549) #33
Northern American deer mouse	DUPLICATION
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	9	Shmt2 (ENSPEMG00000015669) #11	Nxph4 (ENSPEMG00000014406) #12	Lrp1 (ENSPEMG00000015988) #13	Stat6 (ENSPEMG00000006873) #14	Nab2 (ENSPEMG00000003067) #15	Nemp1 (ENSPEMG00000000349) #16	Myo1a (ENSPEMG00000018549) #17	Tac2 (ENSPEMG00000007115) #18	Zbtb39 (ENSPEMG00000001529) #19	Gpr182 (ENSPEMG00000012025) #21	ENSPEMG00000008778 #22	ENSPEMG00000030154 #22	ENSPEMG00000029591 #22	ENSPEMG00000025685 #22	ENSPEMG00000025627 #22	ENSPEMG00000025710 #22	Sdr9c7 (ENSPEMG00000023090) #23	Hsd17b6 (ENSPEMG00000009978) #24	Prim1 (ENSPEMG00000011486) #25	ENSPEMG00000005647 ##26	Ptges3 (ENSPEMG00000010029) #27	Atp5b (ENSPEMG00000013983) #28	Baz2a (ENSPEMG00000018987) #29	Rbms2 (ENSPEMG00000012948) #30	Gls2 (ENSPEMG00000013787) #32	Spryd4 (ENSPEMG00000029549) #33	Mip (ENSPEMG00000014379) #34	Timeless (ENSPEMG00000017944) #35	ENSPEMG00000031146 ##36	Tespa1 (ENSPEMG00000023928)	ENSPEMG00000026112
Northern American deer mouse	MODERN SPECIES	9	R3hdm2 (ENSPEMG00000015964) #8	Stac3 (ENSPEMG00000016520) #9	Ndufa4l2 (ENSPEMG00000025310) #10	Shmt2 (ENSPEMG00000015669) #11	Nxph4 (ENSPEMG00000014406) #12	Lrp1 (ENSPEMG00000015988) #13	Stat6 (ENSPEMG00000006873) #14	Nab2 (ENSPEMG00000003067) #15	Nemp1 (ENSPEMG00000000349) #16	Myo1a (ENSPEMG00000018549) #17	Tac2 (ENSPEMG00000007115) #18	Zbtb39 (ENSPEMG00000001529) #19	Gpr182 (ENSPEMG00000012025) #21	ENSPEMG00000008778 #22	ENSPEMG00000030154 #22	ENSPEMG00000029591 #22	ENSPEMG00000025685 #22	ENSPEMG00000025627 #22	ENSPEMG00000025710 #22	Sdr9c7 (ENSPEMG00000023090) #23	Hsd17b6 (ENSPEMG00000009978) #24	Prim1 (ENSPEMG00000011486) #25	ENSPEMG00000005647 ##26	Ptges3 (ENSPEMG00000010029) #27	Atp5b (ENSPEMG00000013983) #28	Baz2a (ENSPEMG00000018987) #29	Rbms2 (ENSPEMG00000012948) #30	Gls2 (ENSPEMG00000013787) #32	Spryd4 (ENSPEMG00000029549) #33	Mip (ENSPEMG00000014379) #34	Timeless (ENSPEMG00000017944) #35
Northern American deer mouse	MODERN SPECIES	9	Stac3 (ENSPEMG00000016520) #9	Ndufa4l2 (ENSPEMG00000025310) #10	Shmt2 (ENSPEMG00000015669) #11	Nxph4 (ENSPEMG00000014406) #12	Lrp1 (ENSPEMG00000015988) #13	Stat6 (ENSPEMG00000006873) #14	Nab2 (ENSPEMG00000003067) #15	Nemp1 (ENSPEMG00000000349) #16	Myo1a (ENSPEMG00000018549) #17	Tac2 (ENSPEMG00000007115) #18	Zbtb39 (ENSPEMG00000001529) #19	Gpr182 (ENSPEMG00000012025) #21	ENSPEMG00000008778 #22	ENSPEMG00000030154 #22	ENSPEMG00000029591 #22	ENSPEMG00000025685 #22	ENSPEMG00000025627 #22	ENSPEMG00000025710 #22	Sdr9c7 (ENSPEMG00000023090) #23	Hsd17b6 (ENSPEMG00000009978) #24	Prim1 (ENSPEMG00000011486) #25	ENSPEMG00000005647 ##26	Ptges3 (ENSPEMG00000010029) #27	Atp5b (ENSPEMG00000013983) #28	Baz2a (ENSPEMG00000018987) #29	Rbms2 (ENSPEMG00000012948) #30	Gls2 (ENSPEMG00000013787) #32	Spryd4 (ENSPEMG00000029549) #33	Mip (ENSPEMG00000014379) #34	Timeless (ENSPEMG00000017944) #35	ENSPEMG00000031146 ##36
Northern American deer mouse	MODERN SPECIES	9	Inhbc (ENSPEMG00000017942)	R3hdm2 (ENSPEMG00000015964) #8	Stac3 (ENSPEMG00000016520) #9	Ndufa4l2 (ENSPEMG00000025310) #10	Shmt2 (ENSPEMG00000015669) #11	Nxph4 (ENSPEMG00000014406) #12	Lrp1 (ENSPEMG00000015988) #13	Stat6 (ENSPEMG00000006873) #14	Nab2 (ENSPEMG00000003067) #15	Nemp1 (ENSPEMG00000000349) #16	Myo1a (ENSPEMG00000018549) #17	Tac2 (ENSPEMG00000007115) #18	Zbtb39 (ENSPEMG00000001529) #19	Gpr182 (ENSPEMG00000012025) #21	ENSPEMG00000008778 #22	ENSPEMG00000030154 #22	ENSPEMG00000029591 #22	ENSPEMG00000025685 #22	ENSPEMG00000025627 #22	ENSPEMG00000025710 #22	Sdr9c7 (ENSPEMG00000023090) #23	Hsd17b6 (ENSPEMG00000009978) #24	Prim1 (ENSPEMG00000011486) #25	ENSPEMG00000005647 ##26	Ptges3 (ENSPEMG00000010029) #27	Atp5b (ENSPEMG00000013983) #28	Baz2a (ENSPEMG00000018987) #29	Rbms2 (ENSPEMG00000012948) #30	Gls2 (ENSPEMG00000013787) #32	Spryd4 (ENSPEMG00000029549) #33	Mip (ENSPEMG00000014379) #34
Murinae	DUPLICATION
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.a.a.a.a ##22	ENSGT00940000154118.b.w #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Mus	DUPLICATION
Mus	DUPLICATION
Mus	ANCESTRAL SPECIES	23	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Mouse	DUPLICATION
Mouse	DUPLICATION
Mouse	MODERN SPECIES	1	Stac3 (ENSMUSG00000040287) #9	Ndufa4l2 (ENSMUSG00000040280) #10	Shmt2 (ENSMUSG00000025403) #11	Nxph4 (ENSMUSG00000040258) #12	Lrp1 (ENSMUSG00000040249) #13	Stat6 (ENSMUSG00000002147) #14	Nab2 (ENSMUSG00000025402) #15	Nemp1 (ENSMUSG00000040195) #16	Myo1a (ENSMUSG00000025401) #17	Tac2 (ENSMUSG00000025400) #18	Zbtb39 (ENSMUSG00000044617) #19	Gpr182 (ENSMUSG00000058396) #21	Rdh1 (ENSMUSG00000089789) #22	Rdh16f1 (ENSMUSG00000099009)	Rdh9 (ENSMUSG00000056148) #22	Rdh16 (ENSMUSG00000069456) #22	Rdh19 (ENSMUSG00000054052) #22	Rdh16f2 (ENSMUSG00000074639) #22	Rdh7 (ENSMUSG00000040134) #22	Sdr9c7 (ENSMUSG00000040127) #23	Hsd17b6 (ENSMUSG00000025396) #24	Prim1 (ENSMUSG00000025395) #25	Naca (ENSMUSG00000061315) #26	Ptges3 (ENSMUSG00000071072) #27	Atp5b (ENSMUSG00000025393) #28	Baz2a (ENSMUSG00000040054) #29	Rbms2 (ENSMUSG00000040043) #30	Gls2 (ENSMUSG00000044005) #32	Spryd4 (ENSMUSG00000051346) #33	Mip (ENSMUSG00000025389) #34	Timeless (ENSMUSG00000039994) #35
Mouse	MODERN SPECIES	1	R3hdm2 (ENSMUSG00000025404) #8	Stac3 (ENSMUSG00000040287) #9	Ndufa4l2 (ENSMUSG00000040280) #10	Shmt2 (ENSMUSG00000025403) #11	Nxph4 (ENSMUSG00000040258) #12	Lrp1 (ENSMUSG00000040249) #13	Stat6 (ENSMUSG00000002147) #14	Nab2 (ENSMUSG00000025402) #15	Nemp1 (ENSMUSG00000040195) #16	Myo1a (ENSMUSG00000025401) #17	Tac2 (ENSMUSG00000025400) #18	Zbtb39 (ENSMUSG00000044617) #19	Gpr182 (ENSMUSG00000058396) #21	Rdh1 (ENSMUSG00000089789) #22	Rdh16f1 (ENSMUSG00000099009)	Rdh9 (ENSMUSG00000056148) #22	Rdh16 (ENSMUSG00000069456) #22	Rdh19 (ENSMUSG00000054052) #22	Rdh16f2 (ENSMUSG00000074639) #22	Rdh7 (ENSMUSG00000040134) #22	Sdr9c7 (ENSMUSG00000040127) #23	Hsd17b6 (ENSMUSG00000025396) #24	Prim1 (ENSMUSG00000025395) #25	Naca (ENSMUSG00000061315) #26	Ptges3 (ENSMUSG00000071072) #27	Atp5b (ENSMUSG00000025393) #28	Baz2a (ENSMUSG00000040054) #29	Rbms2 (ENSMUSG00000040043) #30	Gls2 (ENSMUSG00000044005) #32	Spryd4 (ENSMUSG00000051346) #33	Mip (ENSMUSG00000025389) #34
Mouse	MODERN SPECIES	1	Ndufa4l2 (ENSMUSG00000040280) #10	Shmt2 (ENSMUSG00000025403) #11	Nxph4 (ENSMUSG00000040258) #12	Lrp1 (ENSMUSG00000040249) #13	Stat6 (ENSMUSG00000002147) #14	Nab2 (ENSMUSG00000025402) #15	Nemp1 (ENSMUSG00000040195) #16	Myo1a (ENSMUSG00000025401) #17	Tac2 (ENSMUSG00000025400) #18	Zbtb39 (ENSMUSG00000044617) #19	Gpr182 (ENSMUSG00000058396) #21	Rdh1 (ENSMUSG00000089789) #22	Rdh16f1 (ENSMUSG00000099009)	Rdh9 (ENSMUSG00000056148) #22	Rdh16 (ENSMUSG00000069456) #22	Rdh19 (ENSMUSG00000054052) #22	Rdh16f2 (ENSMUSG00000074639) #22	Rdh7 (ENSMUSG00000040134) #22	Sdr9c7 (ENSMUSG00000040127) #23	Hsd17b6 (ENSMUSG00000025396) #24	Prim1 (ENSMUSG00000025395) #25	Naca (ENSMUSG00000061315) #26	Ptges3 (ENSMUSG00000071072) #27	Atp5b (ENSMUSG00000025393) #28	Baz2a (ENSMUSG00000040054) #29	Rbms2 (ENSMUSG00000040043) #30	Gls2 (ENSMUSG00000044005) #32	Spryd4 (ENSMUSG00000051346) #33	Mip (ENSMUSG00000025389) #34	Timeless (ENSMUSG00000039994) #35	Apon (ENSMUSG00000051716) ##36
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	22	Stac3 (MGP_PahariEiJ_G0031188) #9	Ndufa4l2 (MGP_PahariEiJ_G0031187) #10	Shmt2 (MGP_PahariEiJ_G0031186) #11	Nxph4 (MGP_PahariEiJ_G0031185) #12	Lrp1 (MGP_PahariEiJ_G0031184) #13	Stat6 (MGP_PahariEiJ_G0031183) #14	Nab2 (MGP_PahariEiJ_G0031182) #15	Nemp1 (MGP_PahariEiJ_G0031181) #16	Myo1a (MGP_PahariEiJ_G0031180) #17	Tac2 (MGP_PahariEiJ_G0031179) #18	Zbtb39 (MGP_PahariEiJ_G0031178) #19	Gpr182 (MGP_PahariEiJ_G0031177) #21	MGP_PahariEiJ_G0031176 #22	MGP_PahariEiJ_G0031175 #22	MGP_PahariEiJ_G0031174 #22	MGP_PahariEiJ_G0031173 #22	Rdh16f2 (MGP_PahariEiJ_G0031172) #22	MGP_PahariEiJ_G0031171 #22	Sdr9c7 (MGP_PahariEiJ_G0031170) #23	Hsd17b6 (MGP_PahariEiJ_G0031169) #24	Prim1 (MGP_PahariEiJ_G0031168) #25	Naca (MGP_PahariEiJ_G0031167) #26	Atp5b (MGP_PahariEiJ_G0031165) #28	Baz2a (MGP_PahariEiJ_G0031164) #29	Rbms2 (MGP_PahariEiJ_G0031163) #30	Gls2 (MGP_PahariEiJ_G0031162) #32	Spryd4 (MGP_PahariEiJ_G0031161) #33	Mip (MGP_PahariEiJ_G0031160) #34	Timeless (MGP_PahariEiJ_G0031159) #35	MGP_PahariEiJ_G0031158	MGP_PahariEiJ_G0031157 #36
Shrew mouse	MODERN SPECIES	22	R3hdm2 (MGP_PahariEiJ_G0031189) #8	Stac3 (MGP_PahariEiJ_G0031188) #9	Ndufa4l2 (MGP_PahariEiJ_G0031187) #10	Shmt2 (MGP_PahariEiJ_G0031186) #11	Nxph4 (MGP_PahariEiJ_G0031185) #12	Lrp1 (MGP_PahariEiJ_G0031184) #13	Stat6 (MGP_PahariEiJ_G0031183) #14	Nab2 (MGP_PahariEiJ_G0031182) #15	Nemp1 (MGP_PahariEiJ_G0031181) #16	Myo1a (MGP_PahariEiJ_G0031180) #17	Tac2 (MGP_PahariEiJ_G0031179) #18	Zbtb39 (MGP_PahariEiJ_G0031178) #19	Gpr182 (MGP_PahariEiJ_G0031177) #21	MGP_PahariEiJ_G0031176 #22	MGP_PahariEiJ_G0031175 #22	MGP_PahariEiJ_G0031174 #22	MGP_PahariEiJ_G0031173 #22	Rdh16f2 (MGP_PahariEiJ_G0031172) #22	MGP_PahariEiJ_G0031171 #22	Sdr9c7 (MGP_PahariEiJ_G0031170) #23	Hsd17b6 (MGP_PahariEiJ_G0031169) #24	Prim1 (MGP_PahariEiJ_G0031168) #25	Naca (MGP_PahariEiJ_G0031167) #26	Atp5b (MGP_PahariEiJ_G0031165) #28	Baz2a (MGP_PahariEiJ_G0031164) #29	Rbms2 (MGP_PahariEiJ_G0031163) #30	Gls2 (MGP_PahariEiJ_G0031162) #32	Spryd4 (MGP_PahariEiJ_G0031161) #33	Mip (MGP_PahariEiJ_G0031160) #34	Timeless (MGP_PahariEiJ_G0031159) #35	MGP_PahariEiJ_G0031158
Mus	ANCESTRAL SPECIES	23	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Mouse	MODERN SPECIES	1	Shmt2 (ENSMUSG00000025403) #11	Nxph4 (ENSMUSG00000040258) #12	Lrp1 (ENSMUSG00000040249) #13	Stat6 (ENSMUSG00000002147) #14	Nab2 (ENSMUSG00000025402) #15	Nemp1 (ENSMUSG00000040195) #16	Myo1a (ENSMUSG00000025401) #17	Tac2 (ENSMUSG00000025400) #18	Zbtb39 (ENSMUSG00000044617) #19	Gpr182 (ENSMUSG00000058396) #21	Rdh1 (ENSMUSG00000089789) #22	Rdh16f1 (ENSMUSG00000099009)	Rdh9 (ENSMUSG00000056148) #22	Rdh16 (ENSMUSG00000069456) #22	Rdh19 (ENSMUSG00000054052) #22	Rdh16f2 (ENSMUSG00000074639) #22	Rdh7 (ENSMUSG00000040134) #22	Sdr9c7 (ENSMUSG00000040127) #23	Hsd17b6 (ENSMUSG00000025396) #24	Prim1 (ENSMUSG00000025395) #25	Naca (ENSMUSG00000061315) #26	Ptges3 (ENSMUSG00000071072) #27	Atp5b (ENSMUSG00000025393) #28	Baz2a (ENSMUSG00000040054) #29	Rbms2 (ENSMUSG00000040043) #30	Gls2 (ENSMUSG00000044005) #32	Spryd4 (ENSMUSG00000051346) #33	Mip (ENSMUSG00000025389) #34	Timeless (ENSMUSG00000039994) #35	Apon (ENSMUSG00000051716) ##36	Apof (ENSMUSG00000047631) #36
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
spretus	DUPLICATION
spretus	MODERN SPECIES	1	Gli1 (MGP_SPRETEiJ_G0016719)	Inhbe (MGP_SPRETEiJ_G0016720)	Inhbc (MGP_SPRETEiJ_G0016721)	R3hdm2 (MGP_SPRETEiJ_G0016722) #8	Stac3 (MGP_SPRETEiJ_G0016723) #9	Ndufa4l2 (MGP_SPRETEiJ_G0016724) #10	Shmt2 (MGP_SPRETEiJ_G0016725) #11	Nxph4 (MGP_SPRETEiJ_G0016726) #12	Lrp1 (MGP_SPRETEiJ_G0016727) #13	Stat6 (MGP_SPRETEiJ_G0016728) #14	Nab2 (MGP_SPRETEiJ_G0016729) #15	Myo1a (MGP_SPRETEiJ_G0016731) #17	Tac2 (MGP_SPRETEiJ_G0016732) #18	Zbtb39 (MGP_SPRETEiJ_G0016733) #19	Gpr182 (MGP_SPRETEiJ_G0016734) #21	MGP_SPRETEiJ_G0016735 #22	MGP_SPRETEiJ_G0016737 ##22	MGP_SPRETEiJ_G0016738 #22	Sdr9c7 (MGP_SPRETEiJ_G0016739) #23	Hsd17b6 (MGP_SPRETEiJ_G0016740) #24	Prim1 (MGP_SPRETEiJ_G0016741) #25	Naca (MGP_SPRETEiJ_G0016742) #26	Ptges3 (MGP_SPRETEiJ_G0016743) #27	Atp5b (MGP_SPRETEiJ_G0016744) #28	Baz2a (MGP_SPRETEiJ_G0016745) #29	Rbms2 (MGP_SPRETEiJ_G0016746) #30	Gls2 (MGP_SPRETEiJ_G0016747) #32	Spryd4 (MGP_SPRETEiJ_G0016748) #33	Mip (MGP_SPRETEiJ_G0016749) #34	Timeless (MGP_SPRETEiJ_G0016750) #35	Apon (MGP_SPRETEiJ_G0016751) ##36
spretus	MODERN SPECIES	1	Inhbc (MGP_SPRETEiJ_G0016721)	R3hdm2 (MGP_SPRETEiJ_G0016722) #8	Stac3 (MGP_SPRETEiJ_G0016723) #9	Ndufa4l2 (MGP_SPRETEiJ_G0016724) #10	Shmt2 (MGP_SPRETEiJ_G0016725) #11	Nxph4 (MGP_SPRETEiJ_G0016726) #12	Lrp1 (MGP_SPRETEiJ_G0016727) #13	Stat6 (MGP_SPRETEiJ_G0016728) #14	Nab2 (MGP_SPRETEiJ_G0016729) #15	Myo1a (MGP_SPRETEiJ_G0016731) #17	Tac2 (MGP_SPRETEiJ_G0016732) #18	Zbtb39 (MGP_SPRETEiJ_G0016733) #19	Gpr182 (MGP_SPRETEiJ_G0016734) #21	MGP_SPRETEiJ_G0016735 #22	MGP_SPRETEiJ_G0016737 ##22	MGP_SPRETEiJ_G0016738 #22	Sdr9c7 (MGP_SPRETEiJ_G0016739) #23	Hsd17b6 (MGP_SPRETEiJ_G0016740) #24	Prim1 (MGP_SPRETEiJ_G0016741) #25	Naca (MGP_SPRETEiJ_G0016742) #26	Ptges3 (MGP_SPRETEiJ_G0016743) #27	Atp5b (MGP_SPRETEiJ_G0016744) #28	Baz2a (MGP_SPRETEiJ_G0016745) #29	Rbms2 (MGP_SPRETEiJ_G0016746) #30	Gls2 (MGP_SPRETEiJ_G0016747) #32	Spryd4 (MGP_SPRETEiJ_G0016748) #33	Mip (MGP_SPRETEiJ_G0016749) #34	Timeless (MGP_SPRETEiJ_G0016750) #35	Apon (MGP_SPRETEiJ_G0016751) ##36	Apof (MGP_SPRETEiJ_G0016752) #36	Stat2 (MGP_SPRETEiJ_G0016753) #37
Steppe mouse	MODERN SPECIES	2596	Inhbe (ENSMSIG00000000566)	Inhbc (ENSMSIG00000000587)	R3hdm2 (ENSMSIG00000000757) #8	Stac3 (ENSMSIG00000002644) #9	Ndufa4l2 (ENSMSIG00000002715) #10	Shmt2 (ENSMSIG00000002744) #11	Nxph4 (ENSMSIG00000002804) #12	Lrp1 (ENSMSIG00000002847) #13	Stat6 (ENSMSIG00000003202) #14	Nab2 (ENSMSIG00000003392) #15	Nemp1 (ENSMSIG00000003480) #16	Myo1a (ENSMSIG00000003896) #17	Tac2 (ENSMSIG00000019140) #18	Zbtb39 (ENSMSIG00000019165) #19	Gpr182 (ENSMSIG00000019172) #21	Rdh16f2 (ENSMSIG00000019184) #22
Shrew mouse	MODERN SPECIES	22	Ndufa4l2 (MGP_PahariEiJ_G0031187) #10	Shmt2 (MGP_PahariEiJ_G0031186) #11	Nxph4 (MGP_PahariEiJ_G0031185) #12	Lrp1 (MGP_PahariEiJ_G0031184) #13	Stat6 (MGP_PahariEiJ_G0031183) #14	Nab2 (MGP_PahariEiJ_G0031182) #15	Nemp1 (MGP_PahariEiJ_G0031181) #16	Myo1a (MGP_PahariEiJ_G0031180) #17	Tac2 (MGP_PahariEiJ_G0031179) #18	Zbtb39 (MGP_PahariEiJ_G0031178) #19	Gpr182 (MGP_PahariEiJ_G0031177) #21	MGP_PahariEiJ_G0031176 #22	MGP_PahariEiJ_G0031175 #22	MGP_PahariEiJ_G0031174 #22	MGP_PahariEiJ_G0031173 #22	Rdh16f2 (MGP_PahariEiJ_G0031172) #22	MGP_PahariEiJ_G0031171 #22	Sdr9c7 (MGP_PahariEiJ_G0031170) #23	Hsd17b6 (MGP_PahariEiJ_G0031169) #24	Prim1 (MGP_PahariEiJ_G0031168) #25	Naca (MGP_PahariEiJ_G0031167) #26	Atp5b (MGP_PahariEiJ_G0031165) #28	Baz2a (MGP_PahariEiJ_G0031164) #29	Rbms2 (MGP_PahariEiJ_G0031163) #30	Gls2 (MGP_PahariEiJ_G0031162) #32	Spryd4 (MGP_PahariEiJ_G0031161) #33	Mip (MGP_PahariEiJ_G0031160) #34	Timeless (MGP_PahariEiJ_G0031159) #35	MGP_PahariEiJ_G0031158	MGP_PahariEiJ_G0031157 #36	MGP_PahariEiJ_G0031156 #37
Mus	ANCESTRAL SPECIES	23	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Ryukyu mouse	MODERN SPECIES	1	Inhbe (MGP_CAROLIEiJ_G0015894)	Inhbc (MGP_CAROLIEiJ_G0015895)	R3hdm2 (MGP_CAROLIEiJ_G0015896) #8	Stac3 (MGP_CAROLIEiJ_G0015897) #9	Ndufa4l2 (MGP_CAROLIEiJ_G0015898) #10	Shmt2 (MGP_CAROLIEiJ_G0015899) #11	Nxph4 (MGP_CAROLIEiJ_G0015900) #12	Lrp1 (MGP_CAROLIEiJ_G0015901) #13	Stat6 (MGP_CAROLIEiJ_G0015902) #14	Nab2 (MGP_CAROLIEiJ_G0015903) #15	Nemp1 (MGP_CAROLIEiJ_G0015904) #16	Myo1a (MGP_CAROLIEiJ_G0015905) #17	Tac2 (MGP_CAROLIEiJ_G0015906) #18	Zbtb39 (MGP_CAROLIEiJ_G0015907) #19	Gpr182 (MGP_CAROLIEiJ_G0015908) #21	Rdh1 (MGP_CAROLIEiJ_G0015909) #22	MGP_CAROLIEiJ_G0015911 ##22	MGP_CAROLIEiJ_G0015912 ##22	Rdh7 (MGP_CAROLIEiJ_G0015913) #22	Sdr9c7 (MGP_CAROLIEiJ_G0015914) #23	MGP_CAROLIEiJ_G0015915 #24	Prim1 (MGP_CAROLIEiJ_G0015916) #25	Naca (MGP_CAROLIEiJ_G0015917) #26	Atp5b (MGP_CAROLIEiJ_G0015919) #28	Baz2a (MGP_CAROLIEiJ_G0015920) #29	Rbms2 (MGP_CAROLIEiJ_G0015921) #30	Gls2 (MGP_CAROLIEiJ_G0015922) #32	Spryd4 (MGP_CAROLIEiJ_G0015923) #33	Mip (MGP_CAROLIEiJ_G0015924) #34	Timeless (MGP_CAROLIEiJ_G0015925) #35	Apon (MGP_CAROLIEiJ_G0015926) ##36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.w.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.x #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Mouse	MODERN SPECIES	1	Inhbe (ENSMUSG00000047492)	Inhbc (ENSMUSG00000025405)	R3hdm2 (ENSMUSG00000025404) #8	Stac3 (ENSMUSG00000040287) #9	Ndufa4l2 (ENSMUSG00000040280) #10	Shmt2 (ENSMUSG00000025403) #11	Nxph4 (ENSMUSG00000040258) #12	Lrp1 (ENSMUSG00000040249) #13	Stat6 (ENSMUSG00000002147) #14	Nab2 (ENSMUSG00000025402) #15	Nemp1 (ENSMUSG00000040195) #16	Myo1a (ENSMUSG00000025401) #17	Tac2 (ENSMUSG00000025400) #18	Zbtb39 (ENSMUSG00000044617) #19	Gpr182 (ENSMUSG00000058396) #21	Rdh1 (ENSMUSG00000089789) #22	Rdh16f1 (ENSMUSG00000099009)	Rdh9 (ENSMUSG00000056148) #22	Rdh16 (ENSMUSG00000069456) #22	Rdh19 (ENSMUSG00000054052) #22	Rdh16f2 (ENSMUSG00000074639) #22	Rdh7 (ENSMUSG00000040134) #22	Sdr9c7 (ENSMUSG00000040127) #23	Hsd17b6 (ENSMUSG00000025396) #24	Prim1 (ENSMUSG00000025395) #25	Naca (ENSMUSG00000061315) #26	Ptges3 (ENSMUSG00000071072) #27	Atp5b (ENSMUSG00000025393) #28	Baz2a (ENSMUSG00000040054) #29	Rbms2 (ENSMUSG00000040043) #30	Gls2 (ENSMUSG00000044005) #32
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	22	Inhbe (MGP_PahariEiJ_G0031191)	Inhbc (MGP_PahariEiJ_G0031190)	R3hdm2 (MGP_PahariEiJ_G0031189) #8	Stac3 (MGP_PahariEiJ_G0031188) #9	Ndufa4l2 (MGP_PahariEiJ_G0031187) #10	Shmt2 (MGP_PahariEiJ_G0031186) #11	Nxph4 (MGP_PahariEiJ_G0031185) #12	Lrp1 (MGP_PahariEiJ_G0031184) #13	Stat6 (MGP_PahariEiJ_G0031183) #14	Nab2 (MGP_PahariEiJ_G0031182) #15	Nemp1 (MGP_PahariEiJ_G0031181) #16	Myo1a (MGP_PahariEiJ_G0031180) #17	Tac2 (MGP_PahariEiJ_G0031179) #18	Zbtb39 (MGP_PahariEiJ_G0031178) #19	Gpr182 (MGP_PahariEiJ_G0031177) #21	MGP_PahariEiJ_G0031176 #22	MGP_PahariEiJ_G0031175 #22	MGP_PahariEiJ_G0031174 #22	MGP_PahariEiJ_G0031173 #22	Rdh16f2 (MGP_PahariEiJ_G0031172) #22	MGP_PahariEiJ_G0031171 #22	Sdr9c7 (MGP_PahariEiJ_G0031170) #23	Hsd17b6 (MGP_PahariEiJ_G0031169) #24	Prim1 (MGP_PahariEiJ_G0031168) #25	Naca (MGP_PahariEiJ_G0031167) #26	Atp5b (MGP_PahariEiJ_G0031165) #28	Baz2a (MGP_PahariEiJ_G0031164) #29	Rbms2 (MGP_PahariEiJ_G0031163) #30	Gls2 (MGP_PahariEiJ_G0031162) #32	Spryd4 (MGP_PahariEiJ_G0031161) #33	Mip (MGP_PahariEiJ_G0031160) #34
Shrew mouse	MODERN SPECIES	22	Inhbc (MGP_PahariEiJ_G0031190)	R3hdm2 (MGP_PahariEiJ_G0031189) #8	Stac3 (MGP_PahariEiJ_G0031188) #9	Ndufa4l2 (MGP_PahariEiJ_G0031187) #10	Shmt2 (MGP_PahariEiJ_G0031186) #11	Nxph4 (MGP_PahariEiJ_G0031185) #12	Lrp1 (MGP_PahariEiJ_G0031184) #13	Stat6 (MGP_PahariEiJ_G0031183) #14	Nab2 (MGP_PahariEiJ_G0031182) #15	Nemp1 (MGP_PahariEiJ_G0031181) #16	Myo1a (MGP_PahariEiJ_G0031180) #17	Tac2 (MGP_PahariEiJ_G0031179) #18	Zbtb39 (MGP_PahariEiJ_G0031178) #19	Gpr182 (MGP_PahariEiJ_G0031177) #21	MGP_PahariEiJ_G0031176 #22	MGP_PahariEiJ_G0031175 #22	MGP_PahariEiJ_G0031174 #22	MGP_PahariEiJ_G0031173 #22	Rdh16f2 (MGP_PahariEiJ_G0031172) #22	MGP_PahariEiJ_G0031171 #22	Sdr9c7 (MGP_PahariEiJ_G0031170) #23	Hsd17b6 (MGP_PahariEiJ_G0031169) #24	Prim1 (MGP_PahariEiJ_G0031168) #25	Naca (MGP_PahariEiJ_G0031167) #26	Atp5b (MGP_PahariEiJ_G0031165) #28	Baz2a (MGP_PahariEiJ_G0031164) #29	Rbms2 (MGP_PahariEiJ_G0031163) #30	Gls2 (MGP_PahariEiJ_G0031162) #32	Spryd4 (MGP_PahariEiJ_G0031161) #33	Mip (MGP_PahariEiJ_G0031160) #34	Timeless (MGP_PahariEiJ_G0031159) #35
Rat	MODERN SPECIES	17	Inhbe (ENSRNOG00000007601)	Inhbc (ENSRNOG00000007700)	R3hdm2 (ENSRNOG00000007801) #8	Stac3 (ENSRNOG00000008050) #9	Ndufa4l2 (ENSRNOG00000031851) #10	Shmt2 (ENSRNOG00000008106) #11	Nxph4 (ENSRNOG00000025059) #12	Lrp1 (ENSRNOG00000025053) #13	Stat6 (ENSRNOG00000025023) #14	Nemp1 (ENSRNOG00000046492) #16	Nab2 (ENSRNOG00000008415) #15	Myo1a (ENSRNOG00000004177) #17	Tac3 (ENSRNOG00000004229) #18	Zbtb39 (ENSRNOG00000004306) #19	Gpr182 (ENSRNOG00000004311) #21	Rdh16 (ENSRNOG00000029651) #22	ENSRNOG00000067654 #24	Rdh7 (ENSRNOG00000004391) #22	Sdr9c7 (ENSRNOG00000004459) #23	Uqcrb (ENSRNOG00000024967)	Mterf3 (ENSRNOG00000004492)	Ptdss1 (ENSRNOG00000052289)	AABR07057438.1 (ENSRNOG00000033952)	Sdc2 (ENSRNOG00000004936)	Cpq (ENSRNOG00000005931)	Tspyl5 (ENSRNOG00000006278)	RGD1562404 (ENSRNOG00000014169)	ENSRNOG00000066306	Mtdh (ENSRNOG00000006870)	ENSRNOG00000068626	Laptm4b (ENSRNOG00000006766)
Murinae	ANCESTRAL SPECIES																	ENSGT00940000154118.b.x #22
Mus	ANCESTRAL SPECIES	23	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028 #24	ENSGT00940000161764 #23	ENSGT00940000154118.b.x #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.b #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9
Mus_A	ANCESTRAL SPECIES	11	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028 #24	ENSGT00940000161764 #23	ENSGT00940000154118.b.x #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.b #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9
Mus_B	ANCESTRAL SPECIES	10	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028 #24	ENSGT00940000161764 #23	ENSGT00940000154118.b.x #22	ENSGT00940000154118.b.w.a.b #22	ENSGT00940000154118.b.w.a.a #22	ENSGT00940000154118.b.w.b #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9
Mouse	MODERN SPECIES	1	Stat2 (ENSMUSG00000040033) #37	Apof (ENSMUSG00000047631) #36	Apon (ENSMUSG00000051716) ##36	Timeless (ENSMUSG00000039994) #35	Mip (ENSMUSG00000025389) #34	Spryd4 (ENSMUSG00000051346) #33	Gls2 (ENSMUSG00000044005) #32	Rbms2 (ENSMUSG00000040043) #30	Baz2a (ENSMUSG00000040054) #29	Atp5b (ENSMUSG00000025393) #28	Ptges3 (ENSMUSG00000071072) #27	Naca (ENSMUSG00000061315) #26	Prim1 (ENSMUSG00000025395) #25	Hsd17b6 (ENSMUSG00000025396) #24	Sdr9c7 (ENSMUSG00000040127) #23	Rdh7 (ENSMUSG00000040134) #22	Rdh16f2 (ENSMUSG00000074639) #22	Rdh19 (ENSMUSG00000054052) #22	Rdh16 (ENSMUSG00000069456) #22	Rdh9 (ENSMUSG00000056148) #22	Rdh16f1 (ENSMUSG00000099009)	Rdh1 (ENSMUSG00000089789) #22	Gpr182 (ENSMUSG00000058396) #21	Zbtb39 (ENSMUSG00000044617) #19	Tac2 (ENSMUSG00000025400) #18	Myo1a (ENSMUSG00000025401) #17	Nemp1 (ENSMUSG00000040195) #16	Nab2 (ENSMUSG00000025402) #15	Stat6 (ENSMUSG00000002147) #14	Lrp1 (ENSMUSG00000040249) #13	Nxph4 (ENSMUSG00000040258) #12
Ryukyu mouse	MODERN SPECIES	1	Il23a (MGP_CAROLIEiJ_G0015929)	Stat2 (MGP_CAROLIEiJ_G0015928) #37	Apof (MGP_CAROLIEiJ_G0015927) #36	Apon (MGP_CAROLIEiJ_G0015926) ##36	Timeless (MGP_CAROLIEiJ_G0015925) #35	Mip (MGP_CAROLIEiJ_G0015924) #34	Spryd4 (MGP_CAROLIEiJ_G0015923) #33	Gls2 (MGP_CAROLIEiJ_G0015922) #32	Rbms2 (MGP_CAROLIEiJ_G0015921) #30	Baz2a (MGP_CAROLIEiJ_G0015920) #29	Atp5b (MGP_CAROLIEiJ_G0015919) #28	Naca (MGP_CAROLIEiJ_G0015917) #26	Prim1 (MGP_CAROLIEiJ_G0015916) #25	MGP_CAROLIEiJ_G0015915 #24	Sdr9c7 (MGP_CAROLIEiJ_G0015914) #23	Rdh7 (MGP_CAROLIEiJ_G0015913) #22	MGP_CAROLIEiJ_G0015912 ##22	MGP_CAROLIEiJ_G0015911 ##22	Rdh1 (MGP_CAROLIEiJ_G0015909) #22	Gpr182 (MGP_CAROLIEiJ_G0015908) #21	Zbtb39 (MGP_CAROLIEiJ_G0015907) #19	Tac2 (MGP_CAROLIEiJ_G0015906) #18	Myo1a (MGP_CAROLIEiJ_G0015905) #17	Nemp1 (MGP_CAROLIEiJ_G0015904) #16	Nab2 (MGP_CAROLIEiJ_G0015903) #15	Stat6 (MGP_CAROLIEiJ_G0015902) #14	Lrp1 (MGP_CAROLIEiJ_G0015901) #13	Nxph4 (MGP_CAROLIEiJ_G0015900) #12	Shmt2 (MGP_CAROLIEiJ_G0015899) #11	Ndufa4l2 (MGP_CAROLIEiJ_G0015898) #10	Stac3 (MGP_CAROLIEiJ_G0015897) #9
Shrew mouse	MODERN SPECIES	22	Il23a (MGP_PahariEiJ_G0031155)	MGP_PahariEiJ_G0031156 #37	MGP_PahariEiJ_G0031157 #36	MGP_PahariEiJ_G0031158	Timeless (MGP_PahariEiJ_G0031159) #35	Mip (MGP_PahariEiJ_G0031160) #34	Spryd4 (MGP_PahariEiJ_G0031161) #33	Gls2 (MGP_PahariEiJ_G0031162) #32	Rbms2 (MGP_PahariEiJ_G0031163) #30	Baz2a (MGP_PahariEiJ_G0031164) #29	Atp5b (MGP_PahariEiJ_G0031165) #28	Naca (MGP_PahariEiJ_G0031167) #26	Prim1 (MGP_PahariEiJ_G0031168) #25	Hsd17b6 (MGP_PahariEiJ_G0031169) #24	Sdr9c7 (MGP_PahariEiJ_G0031170) #23	MGP_PahariEiJ_G0031171 #22	Rdh16f2 (MGP_PahariEiJ_G0031172) #22	MGP_PahariEiJ_G0031173 #22	MGP_PahariEiJ_G0031174 #22	MGP_PahariEiJ_G0031175 #22	MGP_PahariEiJ_G0031176 #22	Gpr182 (MGP_PahariEiJ_G0031177) #21	Zbtb39 (MGP_PahariEiJ_G0031178) #19	Tac2 (MGP_PahariEiJ_G0031179) #18	Myo1a (MGP_PahariEiJ_G0031180) #17	Nemp1 (MGP_PahariEiJ_G0031181) #16	Nab2 (MGP_PahariEiJ_G0031182) #15	Stat6 (MGP_PahariEiJ_G0031183) #14	Lrp1 (MGP_PahariEiJ_G0031184) #13	Nxph4 (MGP_PahariEiJ_G0031185) #12	Shmt2 (MGP_PahariEiJ_G0031186) #11
Rat	MODERN SPECIES	17	Erich5 (ENSRNOG00000005956)	Matn2 (ENSRNOG00000006060)	Laptm4b (ENSRNOG00000006766)	ENSRNOG00000068626	Mtdh (ENSRNOG00000006870)	ENSRNOG00000066306	RGD1562404 (ENSRNOG00000014169)	Tspyl5 (ENSRNOG00000006278)	Cpq (ENSRNOG00000005931)	Sdc2 (ENSRNOG00000004936)	AABR07057438.1 (ENSRNOG00000033952)	Ptdss1 (ENSRNOG00000052289)	Mterf3 (ENSRNOG00000004492)	Uqcrb (ENSRNOG00000024967)	Sdr9c7 (ENSRNOG00000004459) #23	Rdh7 (ENSRNOG00000004391) #22	ENSRNOG00000067654 #24	Rdh16 (ENSRNOG00000029651) #22	Gpr182 (ENSRNOG00000004311) #21	Zbtb39 (ENSRNOG00000004306) #19	Tac3 (ENSRNOG00000004229) #18	Myo1a (ENSRNOG00000004177) #17	Nab2 (ENSRNOG00000008415) #15	Nemp1 (ENSRNOG00000046492) #16	Stat6 (ENSRNOG00000025023) #14	Lrp1 (ENSRNOG00000025053) #13	Nxph4 (ENSRNOG00000025059) #12	Shmt2 (ENSRNOG00000008106) #11	Ndufa4l2 (ENSRNOG00000031851) #10	Stac3 (ENSRNOG00000008050) #9	R3hdm2 (ENSRNOG00000007801) #8
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	606																ENSNGAG00000020260 #22	ENSNGAG00000020704 #24	ENSNGAG00000020955 #22	Sdr9c7 (ENSNGAG00000021175) #23	ENSNGAG00000007035 #25	ENSNGAG00000009199 ##26	Ptges3 (ENSNGAG00000010865) #27	Atp5b (ENSNGAG00000021013) #28	Baz2a (ENSNGAG00000021737) #29	Rbms2 (ENSNGAG00000001476) #30	Gls2 (ENSNGAG00000016238) #32	Spryd4 (ENSNGAG00000012514) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	606														ENSNGAG00000020260 #22	ENSNGAG00000020704 #24	ENSNGAG00000020955 #22	Sdr9c7 (ENSNGAG00000021175) #23	ENSNGAG00000007035 #25	ENSNGAG00000009199 ##26	Ptges3 (ENSNGAG00000010865) #27	Atp5b (ENSNGAG00000021013) #28	Baz2a (ENSNGAG00000021737) #29	Rbms2 (ENSNGAG00000001476) #30	Gls2 (ENSNGAG00000016238) #32	Spryd4 (ENSNGAG00000012514) #33
Lagomorpha	ANCESTRAL SPECIES	87	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028 #24	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25
Pika	DUPLICATION
Pika	MODERN SPECIES	8319																ENSOPRG00000014038 #22
Pika	MODERN SPECIES	10731																ENSOPRG00000006772 #22
Rabbit	DUPLICATION
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	447	INHBE (ENSOCUG00000007382)	INHBC (ENSOCUG00000007380)	R3HDM2 (ENSOCUG00000013258) #8	STAC3 (ENSOCUG00000013251) #9	NDUFA4L2 (ENSOCUG00000023263) #10	SHMT2 (ENSOCUG00000013242) #11	ENSOCUG00000037050	STAT6 (ENSOCUG00000007929) #14	NAB2 (ENSOCUG00000024399) #15	NEMP1 (ENSOCUG00000013180) #16	MYO1A (ENSOCUG00000001335) #17	ENSOCUG00000032767 #18	ZBTB39 (ENSOCUG00000002811) #19	GPR182 (ENSOCUG00000002813) #21	ENSOCUG00000032670 #22	ENSOCUG00000011778 #22	ENSOCUG00000033629 #24	ENSOCUG00000002732 #22	SDR9C7 (ENSOCUG00000003423) #23	ENSOCUG00000035045	ENSOCUG00000003458 #25
Rabbit	MODERN SPECIES	447	GLI1 (ENSOCUG00000011128)	INHBE (ENSOCUG00000007382)	INHBC (ENSOCUG00000007380)	R3HDM2 (ENSOCUG00000013258) #8	STAC3 (ENSOCUG00000013251) #9	NDUFA4L2 (ENSOCUG00000023263) #10	SHMT2 (ENSOCUG00000013242) #11	ENSOCUG00000037050	STAT6 (ENSOCUG00000007929) #14	NAB2 (ENSOCUG00000024399) #15	NEMP1 (ENSOCUG00000013180) #16	MYO1A (ENSOCUG00000001335) #17	ENSOCUG00000032767 #18	ZBTB39 (ENSOCUG00000002811) #19	GPR182 (ENSOCUG00000002813) #21	ENSOCUG00000032670 #22	ENSOCUG00000011778 #22	ENSOCUG00000033629 #24	ENSOCUG00000002732 #22	SDR9C7 (ENSOCUG00000003423) #23	ENSOCUG00000035045	ENSOCUG00000003458 #25
Rabbit	MODERN SPECIES	447	R3HDM2 (ENSOCUG00000013258) #8	STAC3 (ENSOCUG00000013251) #9	NDUFA4L2 (ENSOCUG00000023263) #10	SHMT2 (ENSOCUG00000013242) #11	ENSOCUG00000037050	STAT6 (ENSOCUG00000007929) #14	NAB2 (ENSOCUG00000024399) #15	NEMP1 (ENSOCUG00000013180) #16	MYO1A (ENSOCUG00000001335) #17	ENSOCUG00000032767 #18	ZBTB39 (ENSOCUG00000002811) #19	GPR182 (ENSOCUG00000002813) #21	ENSOCUG00000032670 #22	ENSOCUG00000011778 #22	ENSOCUG00000033629 #24	ENSOCUG00000002732 #22	SDR9C7 (ENSOCUG00000003423) #23	ENSOCUG00000035045	ENSOCUG00000003458 #25
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000162028 #24	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.d ##26	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154118.b #22
Hedgehog	MODERN SPECIES	3732																ENSEEUG00000015550 #22
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	12845																ENSSARG00000009759 #22	ENSSARG00000009743 #22
Common shrew	MODERN SPECIES	7840																ENSSARG00000003908 #22
Common shrew	MODERN SPECIES	6877																ENSSARG00000001493 #22
Common shrew	MODERN SPECIES	12845																ENSSARG00000009743 #22	ENSSARG00000009759 #22
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b #22	ENSGT00940000162028.a.b #24	ENSGT00940000161764 #23	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9	ENSGT00940000155609 #8
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000161764 #23	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9	ENSGT00940000155609 #8
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Cetacea	DUPLICATION
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.pb.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.pb.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	17	KIF5A (ENSPCTG00005014589)	B4GALNT1 (ENSPCTG00005014917)	INHBC (ENSPCTG00005015074)	ENSPCTG00005015121	R3HDM2 (ENSPCTG00005015222) #8	STAC3 (ENSPCTG00005016487) #9	NDUFA4L2 (ENSPCTG00005016804) #10	SHMT2 (ENSPCTG00005016874) #11	NXPH4 (ENSPCTG00005017237) #12	LRP1 (ENSPCTG00005017297) #13	STAT6 (ENSPCTG00005018224) #14	NAB2 (ENSPCTG00005018392) #15	NEMP1 (ENSPCTG00005018448) #16	MYO1A (ENSPCTG00005018524) #17	TAC3 (ENSPCTG00005018801) #18	ENSPCTG00005018833 #22	ENSPCTG00005018865 #24	ENSPCTG00005018887 #22	ENSPCTG00005018932 #24	ENSPCTG00005018975 #22	SDR9C7 (ENSPCTG00005019042) #23	HSD17B6 (ENSPCTG00005019089) #24	PRIM1 (ENSPCTG00005019146) #25	NACA (ENSPCTG00005019191) #26	PTGES3 (ENSPCTG00005019303) #27	ATP5F1B (ENSPCTG00005019389) #28	BAZ2A (ENSPCTG00005019466) #29	RBMS2 (ENSPCTG00005019997) #30	ENSPCTG00005020067	ENSPCTG00005020099	GLS2 (ENSPCTG00005020110) #32
Sperm whale	MODERN SPECIES	17	R3HDM2 (ENSPCTG00005015222) #8	STAC3 (ENSPCTG00005016487) #9	NDUFA4L2 (ENSPCTG00005016804) #10	SHMT2 (ENSPCTG00005016874) #11	NXPH4 (ENSPCTG00005017237) #12	LRP1 (ENSPCTG00005017297) #13	STAT6 (ENSPCTG00005018224) #14	NAB2 (ENSPCTG00005018392) #15	NEMP1 (ENSPCTG00005018448) #16	MYO1A (ENSPCTG00005018524) #17	TAC3 (ENSPCTG00005018801) #18	ENSPCTG00005018833 #22	ENSPCTG00005018865 #24	ENSPCTG00005018887 #22	ENSPCTG00005018932 #24	ENSPCTG00005018975 #22	SDR9C7 (ENSPCTG00005019042) #23	HSD17B6 (ENSPCTG00005019089) #24	PRIM1 (ENSPCTG00005019146) #25	NACA (ENSPCTG00005019191) #26	PTGES3 (ENSPCTG00005019303) #27	ATP5F1B (ENSPCTG00005019389) #28	BAZ2A (ENSPCTG00005019466) #29	RBMS2 (ENSPCTG00005019997) #30	ENSPCTG00005020067	ENSPCTG00005020099	GLS2 (ENSPCTG00005020110) #32	SPRYD4 (ENSPCTG00005020245) #33	MIP (ENSPCTG00005020265) #34	TIMELESS (ENSPCTG00005020308) #35	ENSPCTG00005020413
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a.e #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.pb.b #22	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Dolphin	MODERN SPECIES	4651																ENSTTRG00000000795 #22	SDR9C7 (ENSTTRG00000000794) #23	HSD17B6 (ENSTTRG00000000793) #24
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000160065	ENSGT00980000198488.m.b.b.b.r.a.a	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a.e #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000160065	ENSGT00980000198488.m.b.b.b.r.a.a	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a.e #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Beluga whale	MODERN SPECIES	39	INHBC (ENSDLEG00000003026)	R3HDM2 (ENSDLEG00000003148) #8	ENSDLEG00000003493	STAC3 (ENSDLEG00000003503) #9	NDUFA4L2 (ENSDLEG00000003536) #10	SHMT2 (ENSDLEG00000003549) #11	NXPH4 (ENSDLEG00000003607) #12	LRP1 (ENSDLEG00000003892) #13	STAT6 (ENSDLEG00000005231) #14	NAB2 (ENSDLEG00000005321) #15	NEMP1 (ENSDLEG00000005331) #16	MYO1A (ENSDLEG00000005355) #17	TAC3 (ENSDLEG00000005396) #18	ZBTB39 (ENSDLEG00000005412) #19	GPR182 (ENSDLEG00000005420) #21	ENSDLEG00000005424 #22	SDR9C7 (ENSDLEG00000005442) #23	HSD17B6 (ENSDLEG00000005448) #24	PRIM1 (ENSDLEG00000005458) #25	NACA (ENSDLEG00000005467) #26	ENSDLEG00000005486 #27	ATP5B (ENSDLEG00000005494) #28	BAZ2A (ENSDLEG00000005511) #29	RBMS2 (ENSDLEG00000005536) #30	GLS2 (ENSDLEG00000005634) #32	SPRYD4 (ENSDLEG00000005656) #33	MIP (ENSDLEG00000005665) #34	TIMELESS (ENSDLEG00000005692) #35	ENSDLEG00000005775 ##36	APOF (ENSDLEG00000005801) #36	STAT2 (ENSDLEG00000005822) #37
Cetacea	ANCESTRAL SPECIES	8	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.pb.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000160065	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.pb.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000160065	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a.e #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.pb.b #22	ENSGT00940000154118.b.pb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.w #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Dolphin	MODERN SPECIES	6024																ENSTTRG00000015759 #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00940000154118.b.pb.b #22
Vaquita	MODERN SPECIES	1	INHBC (ENSPSNG00000011598)	R3HDM2 (ENSPSNG00000011734) #8	ENSPSNG00000006066	STAC3 (ENSPSNG00000006089) #9	NDUFA4L2 (ENSPSNG00000006121) #10	SHMT2 (ENSPSNG00000006153) #11	NXPH4 (ENSPSNG00000006288) #12	LRP1 (ENSPSNG00000006383) #13	STAT6 (ENSPSNG00000006492) #14	NAB2 (ENSPSNG00000006572) #15	NEMP1 (ENSPSNG00000006630) #16	MYO1A (ENSPSNG00000006677) #17	TAC3 (ENSPSNG00000006778) #18	ZBTB39 (ENSPSNG00000006814) #19	GPR182 (ENSPSNG00000006835) #21	RDH16 (ENSPSNG00000006845) #22	SDR9C7 (ENSPSNG00000006881) #23	HSD17B6 (ENSPSNG00000006917) #24	PRIM1 (ENSPSNG00000006950) #25	ENSPSNG00000007037 #26	PTGES3 (ENSPSNG00000007149) #27	ATP5F1B (ENSPSNG00000007263) #28	BAZ2A (ENSPSNG00000007406) #29	RBMS2 (ENSPSNG00000007836) #30	GLS2 (ENSPSNG00000007903) #32	SPRYD4 (ENSPSNG00000008071) #33	MIP (ENSPSNG00000008094) #34	TIMELESS (ENSPSNG00000008209) #35	ENSPSNG00000008282 ##36	APOF (ENSPSNG00000008312) #36	STAT2 (ENSPSNG00000008353) #37
Monodontidae	ANCESTRAL SPECIES																	ENSGT00940000154118.b.pb.b #22
Beluga whale	MODERN SPECIES	221																ENSDLEG00000017480 #22
Narwhal	MODERN SPECIES	19																RDH16 (ENSMMNG00015000363) #22
Sperm whale	MODERN SPECIES	17	INHBC (ENSPCTG00005015074)	ENSPCTG00005015121	R3HDM2 (ENSPCTG00005015222) #8	STAC3 (ENSPCTG00005016487) #9	NDUFA4L2 (ENSPCTG00005016804) #10	SHMT2 (ENSPCTG00005016874) #11	NXPH4 (ENSPCTG00005017237) #12	LRP1 (ENSPCTG00005017297) #13	STAT6 (ENSPCTG00005018224) #14	NAB2 (ENSPCTG00005018392) #15	NEMP1 (ENSPCTG00005018448) #16	MYO1A (ENSPCTG00005018524) #17	TAC3 (ENSPCTG00005018801) #18	ENSPCTG00005018833 #22	ENSPCTG00005018865 #24	ENSPCTG00005018887 #22	ENSPCTG00005018932 #24	ENSPCTG00005018975 #22	SDR9C7 (ENSPCTG00005019042) #23	HSD17B6 (ENSPCTG00005019089) #24	PRIM1 (ENSPCTG00005019146) #25	NACA (ENSPCTG00005019191) #26	PTGES3 (ENSPCTG00005019303) #27	ATP5F1B (ENSPCTG00005019389) #28	BAZ2A (ENSPCTG00005019466) #29	RBMS2 (ENSPCTG00005019997) #30	ENSPCTG00005020067	ENSPCTG00005020099	GLS2 (ENSPCTG00005020110) #32	SPRYD4 (ENSPCTG00005020245) #33	MIP (ENSPCTG00005020265) #34
Blue whale	MODERN SPECIES	1	R3HDM2 (ENSBMSG00010009100) #8	STAC3 (ENSBMSG00010008980) #9	NDUFA4L2 (ENSBMSG00010008952) #10	SHMT2 (ENSBMSG00010008931) #11	NXPH4 (ENSBMSG00010008903) #12	LRP1 (ENSBMSG00010008798) #13	STAT6 (ENSBMSG00010008695) #14	NAB2 (ENSBMSG00010008669) #15	NEMP1 (ENSBMSG00010008654) #16	MYO1A (ENSBMSG00010008622) #17	TAC3 (ENSBMSG00010008569) #18	ZBTB39 (ENSBMSG00010008551) #19	GPR182 (ENSBMSG00010008541) #21	ENSBMSG00010008533 #24	ENSBMSG00010008523 #24	RDH16 (ENSBMSG00010008507) #22	SDR9C7 (ENSBMSG00010008484) #23	HSD17B6 (ENSBMSG00010008464) #24	PRIM1 (ENSBMSG00010008439) #25	ENSBMSG00010008408 #26	PTGES3 (ENSBMSG00010008330) #27	ENSBMSG00010008276 #28	BAZ2A (ENSBMSG00010008180) #29	ENSBMSG00010008102	RBMS2 (ENSBMSG00010008084) #30	GLS2 (ENSBMSG00010008060) #32	SPRYD4 (ENSBMSG00010008034) #33	MIP (ENSBMSG00010008023) #34	TIMELESS (ENSBMSG00010008010) #35	ENSBMSG00010007993 ##36	APOF (ENSBMSG00010007986) #36
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000154118.b.qb #22
Odontoceti	ANCESTRAL SPECIES	66															ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.qb #22
Odontoceti_a	ANCESTRAL SPECIES	71															ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.qb #22
Odontoceti_b	ANCESTRAL SPECIES	55															ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.qb #22
Monodontidae	ANCESTRAL SPECIES	62															ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.qb #22
Narwhal	MODERN SPECIES	140															ENSMMNG00015001460 #24	ENSMMNG00015001447 #22
Pecora	DUPLICATION
Pecora	DUPLICATION
Pecora	DUPLICATION
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Siberian musk deer	MODERN SPECIES	1241	INHBE (ENSMMSG00000014142)	INHBC (ENSMMSG00000014131)	R3HDM2 (ENSMMSG00000013912) #8	STAC3 (ENSMMSG00000013843) #9	NDUFA4L2 (ENSMMSG00000013824) #10	ENSMMSG00000013800 #11	NXPH4 (ENSMMSG00000013785) #12	LRP1 (ENSMMSG00000013521) #13	STAT6 (ENSMMSG00000016988) #14	NAB2 (ENSMMSG00000016947) #15	NEMP1 (ENSMMSG00000016873) #16	MYO1A (ENSMMSG00000016701) #17	TAC3 (ENSMMSG00000016614) #18	ZBTB39 (ENSMMSG00000016599) #19	GPR182 (ENSMMSG00000016587) #21	ENSMMSG00000016565 #22	ENSMMSG00000016550	ENSMMSG00000016516 #22	ENSMMSG00000016459 #22	SDR9C7 (ENSMMSG00000016406) #23	ENSMMSG00000016383	ENSMMSG00000016333	HSD17B6 (ENSMMSG00000016311) #24	ENSMMSG00000016273	PRIM1 (ENSMMSG00000016240) #25	ENSMMSG00000016159 #26	ENSMMSG00000015953 #28	ENSMMSG00000015852 #29	RBMS2 (ENSMMSG00000015740) #30	GLS2 (ENSMMSG00000015620) #32	SPRYD4 (ENSMMSG00000015594) #33
Bovidae	ANCESTRAL SPECIES	3	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.b.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Bovinae	ANCESTRAL SPECIES	17	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34
Bos	ANCESTRAL SPECIES	2	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33
Bos_a	ANCESTRAL SPECIES	3	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33
Domestic yak	MODERN SPECIES	24	NDUFA4L2 (ENSBGRG00000005360) #10	SHMT2 (ENSBGRG00000005148) #11	NXPH4 (ENSBGRG00000005113) #12	LRP1 (ENSBGRG00000004617) #13	STAT6 (ENSBGRG00000004366) #14	NAB2 (ENSBGRG00000004277) #15	ENSBGRG00000004255	ENSBGRG00000004233	NEMP1 (ENSBGRG00000004148) #16	MYO1A (ENSBGRG00000004047) #17	ENSBGRG00000003965 #18	ZBTB39 (ENSBGRG00000003920) #19	GPR182 (ENSBGRG00000003907) #21	ENSBGRG00000003857	ENSBGRG00000003844 #24	ENSBGRG00000003798 #22	ENSBGRG00000003774 #22	SDR9C7 (ENSBGRG00000003657) #23	ENSBGRG00000003614	ENSBGRG00000003600 #22	ENSBGRG00000003589 #24	HSD17B6 (ENSBGRG00000003564) #24	PRIM1 (ENSBGRG00000003542) #25	ENSBGRG00000003514 #26	ENSBGRG00000003503	ENSBGRG00000003401 #27	ATP5F1B (ENSBGRG00000003323) #28	BAZ2A (ENSBGRG00000003190) #29	RBMS2 (ENSBGRG00000003102) #30	GLS2 (ENSBGRG00000002966) #32	SPRYD4 (ENSBGRG00000002935) #33
Wild yak	MODERN SPECIES	1313	R3HDM2 (ENSBMUG00000025750) #8	STAC3 (ENSBMUG00000025762) #9	ENSBMUG00000025768	SHMT2 (ENSBMUG00000025780) #11	NXPH4 (ENSBMUG00000025791) #12	LRP1 (ENSBMUG00000025810) #13	STAT6 (ENSBMUG00000025845) #14	NAB2 (ENSBMUG00000025857) #15	NEMP1 (ENSBMUG00000025867) #16	MYO1A (ENSBMUG00000025873) #17	TAC3 (ENSBMUG00000025885) #18	ZBTB39 (ENSBMUG00000025891) #19	GPR182 (ENSBMUG00000025895) #21	ENSBMUG00000025901	ENSBMUG00000025907 #24	ENSBMUG00000025910 #22	ENSBMUG00000025913 #22	ENSBMUG00000025922 #22	SDR9C7 (ENSBMUG00000025927) #23
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000160065	ENSGT00940000155609.i #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34
Hybrid Bos Indicus	MODERN SPECIES	24	INHBC (ENSBIXG00005012395)	ENSBIXG00005001373 #8	STAC3 (ENSBIXG00005012603) #9	NDUFA4L2 (ENSBIXG00005012626) #10	SHMT2 (ENSBIXG00005012660) #11	NXPH4 (ENSBIXG00005012677) #12	LRP1 (ENSBIXG00005012721) #13	STAT6 (ENSBIXG00005001415) #14	NAB2 (ENSBIXG00005007004) #15	NEMP1 (ENSBIXG00005012888) #16	MYO1A (ENSBIXG00005013026) #17	TAC3 (ENSBIXG00005013089) #18	ZBTB39 (ENSBIXG00005013102) #19	GPR182 (ENSBIXG00005013112) #21	ENSBIXG00005013123	ENSBIXG00005013438 #22	ENSBIXG00005013487 #22	ENSBIXG00005013505 #22	SDR9C7 (ENSBIXG00005013558) #23	ENSBIXG00005013575	ENSBIXG00005013779 #22	HSD17B6 (ENSBIXG00005013894) #24	PRIM1 (ENSBIXG00005013939) #25	ENSBIXG00005014024 #26	PTGES3 (ENSBIXG00005014081) #27	ATP5F1B (ENSBIXG00005001839) #28	BAZ2A (ENSBIXG00005014206) #29	RBMS2 (ENSBIXG00005000251) #30	GLS2 (ENSBIXG00005014289) #32	SPRYD4 (ENSBIXG00005001889) #33	MIP (ENSBIXG00005014332) #34
Cow	MODERN SPECIES	24	INHBC (ENSBTAG00000019084)	R3HDM2 (ENSBTAG00000018361) #8	STAC3 (ENSBTAG00000018358) #9	NDUFA4L2 (ENSBTAG00000031503) #10	SHMT2 (ENSBTAG00000031500) #11	NXPH4 (ENSBTAG00000047650) #12	LRP1 (ENSBTAG00000010830) #13	STAT6 (ENSBTAG00000006335) #14	NAB2 (ENSBTAG00000006324) #15	ENSBTAG00000031076	NEMP1 (ENSBTAG00000014659) #16	MYO1A (ENSBTAG00000014655) #17	TAC3 (ENSBTAG00000021807) #18	ZBTB39 (ENSBTAG00000038498) #19	GPR182 (ENSBTAG00000039157) #21	ENSBTAG00000049081 #22	ENSBTAG00000050051 #22	RDH16 (ENSBTAG00000001392) #22	SDR9C7 (ENSBTAG00000013443) #23	ENSBTAG00000055155	ENSBTAG00000051761 #22	HSD17B6 (ENSBTAG00000011720) #24	PRIM1 (ENSBTAG00000044000) #25	NACA (ENSBTAG00000010701) #26	ENSBTAG00000055262	PTGES3 (ENSBTAG00000017967) #27	ATP5F1B (ENSBTAG00000013315) #28	BAZ2A (ENSBTAG00000017840) #29	RBMS2 (ENSBTAG00000017830) #30	SPRYD4 (ENSBTAG00000009281) #33	GLS2 (ENSBTAG00000009284) #32
American bison	MODERN SPECIES	3043	R3HDM2 (ENSBBBG00000012343) #8	STAC3 (ENSBBBG00000009086) #9	NDUFA4L2 (ENSBBBG00000012377) #10	SHMT2 (ENSBBBG00000012405) #11	NXPH4 (ENSBBBG00000002374) #12	LRP1 (ENSBBBG00000012523) #13	STAT6 (ENSBBBG00000012670) #14	NAB2 (ENSBBBG00000001815) #15	ENSBBBG00000012717	NEMP1 (ENSBBBG00000012736) #16	MYO1A (ENSBBBG00000007932) #17	TAC3 (ENSBBBG00000012783) #18	ZBTB39 (ENSBBBG00000002475) #19	GPR182 (ENSBBBG00000012789) #21	ENSBBBG00000012805	ENSBBBG00000012808 #22	ENSBBBG00000012963 #22	ENSBBBG00000012989 #22	SDR9C7 (ENSBBBG00000013000) #23	ENSBBBG00000013007	ENSBBBG00000007888 #24	HSD17B6 (ENSBBBG00000013035) #24	PRIM1 (ENSBBBG00000013047) #25	ENSBBBG00000013066 #26	PTGES3 (ENSBBBG00000013107) #27	ATP5F1B (ENSBBBG00000002642) #28	BAZ2A (ENSBBBG00000002669) #29	RBMS2 (ENSBBBG00000013272) #30	GLS2 (ENSBBBG00000013300) #32	SPRYD4 (ENSBBBG00000002703) #33	MIP (ENSBBBG00000013310) #34
Caprinae	ANCESTRAL SPECIES		ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.b.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b.r ##26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Rambouillet Sheep	MODERN SPECIES	19	INHBC (ENSOARG00020001401)	R3HDM2 (ENSOARG00020001425) #8	STAC3 (ENSOARG00020001529) #9	NDUFA4L2 (ENSOARG00020001582) #10	SHMT2 (ENSOARG00020001596) #11	NXPH4 (ENSOARG00020001623) #12	LRP1 (ENSOARG00020001685) #13	STAT6 (ENSOARG00020001933) #14	NAB2 (ENSOARG00020002028) #15	NEMP1 (ENSOARG00020002060) #16	MYO1A (ENSOARG00020002126) #17	TAC3 (ENSOARG00020002146) #18	ZBTB39 (ENSOARG00020002175) #19	GPR182 (ENSOARG00020002179) #21	ENSOARG00020002192 #22	ENSOARG00020002206 #22	ENSOARG00020002217 #24	ENSOARG00020002226 #22	SDR9C7 (ENSOARG00020002232) #23	ENSOARG00020002244	ENSOARG00020002250 #24	HSD17B6 (ENSOARG00020002262) #24	PRIM1 (ENSOARG00020002282) #25	ENSOARG00020002301 ##26	ENSOARG00020002335 #27	ATP5F1B (ENSOARG00020002370) #28	BAZ2A (ENSOARG00020002394) #29	RBMS2 (ENSOARG00020002450) #30	ENSOARG00020002476	GLS2 (ENSOARG00020002498) #32	SPRYD4 (ENSOARG00020002567) #33
Goat	DUPLICATION
Goat	MODERN SPECIES	24	ENSCHIG00000007552	R3HDM2 (ENSCHIG00000014022) #8	STAC3 (ENSCHIG00000000887) #9	SHMT2 (ENSCHIG00000003271) #11	NXPH4 (ENSCHIG00000003451) #12	LRP1 (ENSCHIG00000024408) #13	STAT6 (ENSCHIG00000025666) #14	NAB2 (ENSCHIG00000019285) #15	NEMP1 (ENSCHIG00000015757) #16	MYO1A (ENSCHIG00000011774) #17	TAC3 (ENSCHIG00000026341) #18	ZBTB39 (ENSCHIG00000001253) #19	GPR182 (ENSCHIG00000008110) #21	ENSCHIG00000012307	ENSCHIG00000024299 #22	ENSCHIG00000010628 #22	ENSCHIG00000025887 #22	ENSCHIG00000022462 #22	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000008219	ENSCHIG00000027068 #22	HSD17B6 (ENSCHIG00000012163) #24	PRIM1 (ENSCHIG00000026915) #25	ENSCHIG00000013646 ##26	ENSCHIG00000011269 #27	ATP5F1B (ENSCHIG00000010757) #28	BAZ2A (ENSCHIG00000025797) #29	RBMS2 (ENSCHIG00000020791) #30	ENSCHIG00000017636	GLS2 (ENSCHIG00000009891) #32	SPRYD4 (ENSCHIG00000021196) #33
Goat	MODERN SPECIES	24	INHBC (ENSCHIG00000017660)	ENSCHIG00000007552	R3HDM2 (ENSCHIG00000014022) #8	STAC3 (ENSCHIG00000000887) #9	SHMT2 (ENSCHIG00000003271) #11	NXPH4 (ENSCHIG00000003451) #12	LRP1 (ENSCHIG00000024408) #13	STAT6 (ENSCHIG00000025666) #14	NAB2 (ENSCHIG00000019285) #15	NEMP1 (ENSCHIG00000015757) #16	MYO1A (ENSCHIG00000011774) #17	TAC3 (ENSCHIG00000026341) #18	ZBTB39 (ENSCHIG00000001253) #19	GPR182 (ENSCHIG00000008110) #21	ENSCHIG00000012307	ENSCHIG00000024299 #22	ENSCHIG00000010628 #22	ENSCHIG00000025887 #22	ENSCHIG00000022462 #22	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000008219	ENSCHIG00000027068 #22	HSD17B6 (ENSCHIG00000012163) #24	PRIM1 (ENSCHIG00000026915) #25	ENSCHIG00000013646 ##26	ENSCHIG00000011269 #27	ATP5F1B (ENSCHIG00000010757) #28	BAZ2A (ENSCHIG00000025797) #29	RBMS2 (ENSCHIG00000020791) #30	ENSCHIG00000017636	GLS2 (ENSCHIG00000009891) #32
Yarkand deer	MODERN SPECIES	22	INHBC (ENSCHYG00000001473)	R3HDM2 (ENSCHYG00000001549) #8	STAC3 (ENSCHYG00000001908) #9	NDUFA4L2 (ENSCHYG00000001961) #10	SHMT2 (ENSCHYG00000001992) #11	NXPH4 (ENSCHYG00000002015) #12	LRP1 (ENSCHYG00000002067) #13	STAT6 (ENSCHYG00000002302) #14	NAB2 (ENSCHYG00000002341) #15	NEMP1 (ENSCHYG00000002376) #16	MYO1A (ENSCHYG00000002446) #17	TAC3 (ENSCHYG00000002535) #18	ZBTB39 (ENSCHYG00000002554) #19	GPR182 (ENSCHYG00000002559) #21	ENSCHYG00000002565 #24	RDH16 (ENSCHYG00000002593) #22	SDR9C7 (ENSCHYG00000002626) #23	ENSCHYG00000002650 #22	HSD17B6 (ENSCHYG00000002745) #24	PRIM1 (ENSCHYG00000002764) #25	ENSCHYG00000002804 #26	ENSCHYG00000002851 #27	ATP5F1B (ENSCHYG00000002934) #28	BAZ2A (ENSCHYG00000002971) #29	RBMS2 (ENSCHYG00000003089) #30	GLS2 (ENSCHYG00000003128) #32	SPRYD4 (ENSCHYG00000003172) #33	MIP (ENSCHYG00000003178) #34	TIMELESS (ENSCHYG00000003196) #35	ENSCHYG00000003221 ##36	APOF (ENSCHYG00000003234) #36
Pecora	ANCESTRAL SPECIES																	ENSGT00940000154118.b.rb.a.b #22
Percora_a	ANCESTRAL SPECIES																	ENSGT00940000154118.b.rb.a.b #22
Bovidae	ANCESTRAL SPECIES																	ENSGT00940000154118.b.rb.a.b #22
Bovinae	ANCESTRAL SPECIES	17	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Bos	ANCESTRAL SPECIES	2	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34
Wild yak	MODERN SPECIES	1313	STAC3 (ENSBMUG00000025762) #9	ENSBMUG00000025768	SHMT2 (ENSBMUG00000025780) #11	NXPH4 (ENSBMUG00000025791) #12	LRP1 (ENSBMUG00000025810) #13	STAT6 (ENSBMUG00000025845) #14	NAB2 (ENSBMUG00000025857) #15	NEMP1 (ENSBMUG00000025867) #16	MYO1A (ENSBMUG00000025873) #17	TAC3 (ENSBMUG00000025885) #18	ZBTB39 (ENSBMUG00000025891) #19	GPR182 (ENSBMUG00000025895) #21	ENSBMUG00000025901	ENSBMUG00000025907 #24	ENSBMUG00000025910 #22	ENSBMUG00000025913 #22	ENSBMUG00000025922 #22	SDR9C7 (ENSBMUG00000025927) #23
Domestic yak	MODERN SPECIES	24	SHMT2 (ENSBGRG00000005148) #11	NXPH4 (ENSBGRG00000005113) #12	LRP1 (ENSBGRG00000004617) #13	STAT6 (ENSBGRG00000004366) #14	NAB2 (ENSBGRG00000004277) #15	ENSBGRG00000004255	ENSBGRG00000004233	NEMP1 (ENSBGRG00000004148) #16	MYO1A (ENSBGRG00000004047) #17	ENSBGRG00000003965 #18	ZBTB39 (ENSBGRG00000003920) #19	GPR182 (ENSBGRG00000003907) #21	ENSBGRG00000003857	ENSBGRG00000003844 #24	ENSBGRG00000003798 #22	ENSBGRG00000003774 #22	SDR9C7 (ENSBGRG00000003657) #23	ENSBGRG00000003614	ENSBGRG00000003600 #22	ENSBGRG00000003589 #24	HSD17B6 (ENSBGRG00000003564) #24	PRIM1 (ENSBGRG00000003542) #25	ENSBGRG00000003514 #26	ENSBGRG00000003503	ENSBGRG00000003401 #27	ATP5F1B (ENSBGRG00000003323) #28	BAZ2A (ENSBGRG00000003190) #29	RBMS2 (ENSBGRG00000003102) #30	GLS2 (ENSBGRG00000002966) #32	SPRYD4 (ENSBGRG00000002935) #33	MIP (ENSBGRG00000002930) #34
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000155609.i #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005001373 #8	STAC3 (ENSBIXG00005012603) #9	NDUFA4L2 (ENSBIXG00005012626) #10	SHMT2 (ENSBIXG00005012660) #11	NXPH4 (ENSBIXG00005012677) #12	LRP1 (ENSBIXG00005012721) #13	STAT6 (ENSBIXG00005001415) #14	NAB2 (ENSBIXG00005007004) #15	NEMP1 (ENSBIXG00005012888) #16	MYO1A (ENSBIXG00005013026) #17	TAC3 (ENSBIXG00005013089) #18	ZBTB39 (ENSBIXG00005013102) #19	GPR182 (ENSBIXG00005013112) #21	ENSBIXG00005013123	ENSBIXG00005013438 #22	ENSBIXG00005013487 #22	ENSBIXG00005013505 #22	SDR9C7 (ENSBIXG00005013558) #23	ENSBIXG00005013575	ENSBIXG00005013779 #22	HSD17B6 (ENSBIXG00005013894) #24	PRIM1 (ENSBIXG00005013939) #25	ENSBIXG00005014024 #26	PTGES3 (ENSBIXG00005014081) #27	ATP5F1B (ENSBIXG00005001839) #28	BAZ2A (ENSBIXG00005014206) #29	RBMS2 (ENSBIXG00005000251) #30	GLS2 (ENSBIXG00005014289) #32	SPRYD4 (ENSBIXG00005001889) #33	MIP (ENSBIXG00005014332) #34	TIMELESS (ENSBIXG00005005934) #35
Cow	MODERN SPECIES	24	R3HDM2 (ENSBTAG00000018361) #8	STAC3 (ENSBTAG00000018358) #9	NDUFA4L2 (ENSBTAG00000031503) #10	SHMT2 (ENSBTAG00000031500) #11	NXPH4 (ENSBTAG00000047650) #12	LRP1 (ENSBTAG00000010830) #13	STAT6 (ENSBTAG00000006335) #14	NAB2 (ENSBTAG00000006324) #15	ENSBTAG00000031076	NEMP1 (ENSBTAG00000014659) #16	MYO1A (ENSBTAG00000014655) #17	TAC3 (ENSBTAG00000021807) #18	ZBTB39 (ENSBTAG00000038498) #19	GPR182 (ENSBTAG00000039157) #21	ENSBTAG00000049081 #22	ENSBTAG00000050051 #22	RDH16 (ENSBTAG00000001392) #22	SDR9C7 (ENSBTAG00000013443) #23	ENSBTAG00000055155	ENSBTAG00000051761 #22	HSD17B6 (ENSBTAG00000011720) #24	PRIM1 (ENSBTAG00000044000) #25	NACA (ENSBTAG00000010701) #26	ENSBTAG00000055262	PTGES3 (ENSBTAG00000017967) #27	ATP5F1B (ENSBTAG00000013315) #28	BAZ2A (ENSBTAG00000017840) #29	RBMS2 (ENSBTAG00000017830) #30	SPRYD4 (ENSBTAG00000009281) #33	GLS2 (ENSBTAG00000009284) #32	MIP (ENSBTAG00000010127) #34
American bison	MODERN SPECIES	3043	STAC3 (ENSBBBG00000009086) #9	NDUFA4L2 (ENSBBBG00000012377) #10	SHMT2 (ENSBBBG00000012405) #11	NXPH4 (ENSBBBG00000002374) #12	LRP1 (ENSBBBG00000012523) #13	STAT6 (ENSBBBG00000012670) #14	NAB2 (ENSBBBG00000001815) #15	ENSBBBG00000012717	NEMP1 (ENSBBBG00000012736) #16	MYO1A (ENSBBBG00000007932) #17	TAC3 (ENSBBBG00000012783) #18	ZBTB39 (ENSBBBG00000002475) #19	GPR182 (ENSBBBG00000012789) #21	ENSBBBG00000012805	ENSBBBG00000012808 #22	ENSBBBG00000012963 #22	ENSBBBG00000012989 #22	SDR9C7 (ENSBBBG00000013000) #23	ENSBBBG00000013007	ENSBBBG00000007888 #24	HSD17B6 (ENSBBBG00000013035) #24	PRIM1 (ENSBBBG00000013047) #25	ENSBBBG00000013066 #26	PTGES3 (ENSBBBG00000013107) #27	ATP5F1B (ENSBBBG00000002642) #28	BAZ2A (ENSBBBG00000002669) #29	RBMS2 (ENSBBBG00000013272) #30	GLS2 (ENSBBBG00000013300) #32	SPRYD4 (ENSBBBG00000002703) #33	MIP (ENSBBBG00000013310) #34	TIMELESS (ENSBBBG00000001590) #35
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000154118.b.rb.a.b #22
Goat	MODERN SPECIES	24	R3HDM2 (ENSCHIG00000014022) #8	STAC3 (ENSCHIG00000000887) #9	SHMT2 (ENSCHIG00000003271) #11	NXPH4 (ENSCHIG00000003451) #12	LRP1 (ENSCHIG00000024408) #13	STAT6 (ENSCHIG00000025666) #14	NAB2 (ENSCHIG00000019285) #15	NEMP1 (ENSCHIG00000015757) #16	MYO1A (ENSCHIG00000011774) #17	TAC3 (ENSCHIG00000026341) #18	ZBTB39 (ENSCHIG00000001253) #19	GPR182 (ENSCHIG00000008110) #21	ENSCHIG00000012307	ENSCHIG00000024299 #22	ENSCHIG00000010628 #22	ENSCHIG00000025887 #22	ENSCHIG00000022462 #22	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000008219	ENSCHIG00000027068 #22	HSD17B6 (ENSCHIG00000012163) #24	PRIM1 (ENSCHIG00000026915) #25	ENSCHIG00000013646 ##26	ENSCHIG00000011269 #27	ATP5F1B (ENSCHIG00000010757) #28	BAZ2A (ENSCHIG00000025797) #29	RBMS2 (ENSCHIG00000020791) #30	ENSCHIG00000017636	GLS2 (ENSCHIG00000009891) #32	SPRYD4 (ENSCHIG00000021196) #33	MIP (ENSCHIG00000013963) #34
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Percora_a	DUPLICATION
Percora_a	ANCESTRAL SPECIES																	ENSGT00940000154118.b.rb.b.a #22
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.b.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32
Caprinae	ANCESTRAL SPECIES		ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.b.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b.r ##26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33
Rambouillet Sheep	MODERN SPECIES	19	INHBE (ENSOARG00020001392)	INHBC (ENSOARG00020001401)	R3HDM2 (ENSOARG00020001425) #8	STAC3 (ENSOARG00020001529) #9	NDUFA4L2 (ENSOARG00020001582) #10	SHMT2 (ENSOARG00020001596) #11	NXPH4 (ENSOARG00020001623) #12	LRP1 (ENSOARG00020001685) #13	STAT6 (ENSOARG00020001933) #14	NAB2 (ENSOARG00020002028) #15	NEMP1 (ENSOARG00020002060) #16	MYO1A (ENSOARG00020002126) #17	TAC3 (ENSOARG00020002146) #18	ZBTB39 (ENSOARG00020002175) #19	GPR182 (ENSOARG00020002179) #21	ENSOARG00020002192 #22	ENSOARG00020002206 #22	ENSOARG00020002217 #24	ENSOARG00020002226 #22	SDR9C7 (ENSOARG00020002232) #23	ENSOARG00020002244	ENSOARG00020002250 #24	HSD17B6 (ENSOARG00020002262) #24	PRIM1 (ENSOARG00020002282) #25	ENSOARG00020002301 ##26	ENSOARG00020002335 #27	ATP5F1B (ENSOARG00020002370) #28	BAZ2A (ENSOARG00020002394) #29	RBMS2 (ENSOARG00020002450) #30	ENSOARG00020002476	GLS2 (ENSOARG00020002498) #32
Siberian musk deer	MODERN SPECIES	1241	STAC3 (ENSMMSG00000013843) #9	NDUFA4L2 (ENSMMSG00000013824) #10	ENSMMSG00000013800 #11	NXPH4 (ENSMMSG00000013785) #12	LRP1 (ENSMMSG00000013521) #13	STAT6 (ENSMMSG00000016988) #14	NAB2 (ENSMMSG00000016947) #15	NEMP1 (ENSMMSG00000016873) #16	MYO1A (ENSMMSG00000016701) #17	TAC3 (ENSMMSG00000016614) #18	ZBTB39 (ENSMMSG00000016599) #19	GPR182 (ENSMMSG00000016587) #21	ENSMMSG00000016565 #22	ENSMMSG00000016550	ENSMMSG00000016516 #22	ENSMMSG00000016459 #22	SDR9C7 (ENSMMSG00000016406) #23	ENSMMSG00000016383	ENSMMSG00000016333	HSD17B6 (ENSMMSG00000016311) #24	ENSMMSG00000016273	PRIM1 (ENSMMSG00000016240) #25	ENSMMSG00000016159 #26	ENSMMSG00000015953 #28	ENSMMSG00000015852 #29	RBMS2 (ENSMMSG00000015740) #30	GLS2 (ENSMMSG00000015620) #32	SPRYD4 (ENSMMSG00000015594) #33	MIP (ENSMMSG00000015573) #34	TIMELESS (ENSMMSG00000015470) #35	ENSMMSG00000015438 ##36
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.b.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Caprinae	ANCESTRAL SPECIES		ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.b.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b.r ##26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36	ENSGT00500000045104.g #36
Goat	MODERN SPECIES	24	STAC3 (ENSCHIG00000000887) #9	SHMT2 (ENSCHIG00000003271) #11	NXPH4 (ENSCHIG00000003451) #12	LRP1 (ENSCHIG00000024408) #13	STAT6 (ENSCHIG00000025666) #14	NAB2 (ENSCHIG00000019285) #15	NEMP1 (ENSCHIG00000015757) #16	MYO1A (ENSCHIG00000011774) #17	TAC3 (ENSCHIG00000026341) #18	ZBTB39 (ENSCHIG00000001253) #19	GPR182 (ENSCHIG00000008110) #21	ENSCHIG00000012307	ENSCHIG00000024299 #22	ENSCHIG00000010628 #22	ENSCHIG00000025887 #22	ENSCHIG00000022462 #22	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000008219	ENSCHIG00000027068 #22	HSD17B6 (ENSCHIG00000012163) #24	PRIM1 (ENSCHIG00000026915) #25	ENSCHIG00000013646 ##26	ENSCHIG00000011269 #27	ATP5F1B (ENSCHIG00000010757) #28	BAZ2A (ENSCHIG00000025797) #29	RBMS2 (ENSCHIG00000020791) #30	ENSCHIG00000017636	GLS2 (ENSCHIG00000009891) #32	SPRYD4 (ENSCHIG00000021196) #33	MIP (ENSCHIG00000013963) #34	TIMELESS (ENSCHIG00000010689) #35
Rambouillet Sheep	MODERN SPECIES	19	STAC3 (ENSOARG00020001529) #9	NDUFA4L2 (ENSOARG00020001582) #10	SHMT2 (ENSOARG00020001596) #11	NXPH4 (ENSOARG00020001623) #12	LRP1 (ENSOARG00020001685) #13	STAT6 (ENSOARG00020001933) #14	NAB2 (ENSOARG00020002028) #15	NEMP1 (ENSOARG00020002060) #16	MYO1A (ENSOARG00020002126) #17	TAC3 (ENSOARG00020002146) #18	ZBTB39 (ENSOARG00020002175) #19	GPR182 (ENSOARG00020002179) #21	ENSOARG00020002192 #22	ENSOARG00020002206 #22	ENSOARG00020002217 #24	ENSOARG00020002226 #22	SDR9C7 (ENSOARG00020002232) #23	ENSOARG00020002244	ENSOARG00020002250 #24	HSD17B6 (ENSOARG00020002262) #24	PRIM1 (ENSOARG00020002282) #25	ENSOARG00020002301 ##26	ENSOARG00020002335 #27	ATP5F1B (ENSOARG00020002370) #28	BAZ2A (ENSOARG00020002394) #29	RBMS2 (ENSOARG00020002450) #30	ENSOARG00020002476	GLS2 (ENSOARG00020002498) #32	SPRYD4 (ENSOARG00020002567) #33	MIP (ENSOARG00020002585) #34	TIMELESS (ENSOARG00020002605) #35
Bovinae	ANCESTRAL SPECIES	17	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Bos	ANCESTRAL SPECIES	2	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Bos_b	ANCESTRAL SPECIES	4	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Cow	MODERN SPECIES	24	STAC3 (ENSBTAG00000018358) #9	NDUFA4L2 (ENSBTAG00000031503) #10	SHMT2 (ENSBTAG00000031500) #11	NXPH4 (ENSBTAG00000047650) #12	LRP1 (ENSBTAG00000010830) #13	STAT6 (ENSBTAG00000006335) #14	NAB2 (ENSBTAG00000006324) #15	ENSBTAG00000031076	NEMP1 (ENSBTAG00000014659) #16	MYO1A (ENSBTAG00000014655) #17	TAC3 (ENSBTAG00000021807) #18	ZBTB39 (ENSBTAG00000038498) #19	GPR182 (ENSBTAG00000039157) #21	ENSBTAG00000049081 #22	ENSBTAG00000050051 #22	RDH16 (ENSBTAG00000001392) #22	SDR9C7 (ENSBTAG00000013443) #23	ENSBTAG00000055155	ENSBTAG00000051761 #22	HSD17B6 (ENSBTAG00000011720) #24	PRIM1 (ENSBTAG00000044000) #25	NACA (ENSBTAG00000010701) #26	ENSBTAG00000055262	PTGES3 (ENSBTAG00000017967) #27	ATP5F1B (ENSBTAG00000013315) #28	BAZ2A (ENSBTAG00000017840) #29	RBMS2 (ENSBTAG00000017830) #30	SPRYD4 (ENSBTAG00000009281) #33	GLS2 (ENSBTAG00000009284) #32	MIP (ENSBTAG00000010127) #34	TIMELESS (ENSBTAG00000020459) #35
Hybrid Bos Indicus	MODERN SPECIES	24	STAC3 (ENSBIXG00005012603) #9	NDUFA4L2 (ENSBIXG00005012626) #10	SHMT2 (ENSBIXG00005012660) #11	NXPH4 (ENSBIXG00005012677) #12	LRP1 (ENSBIXG00005012721) #13	STAT6 (ENSBIXG00005001415) #14	NAB2 (ENSBIXG00005007004) #15	NEMP1 (ENSBIXG00005012888) #16	MYO1A (ENSBIXG00005013026) #17	TAC3 (ENSBIXG00005013089) #18	ZBTB39 (ENSBIXG00005013102) #19	GPR182 (ENSBIXG00005013112) #21	ENSBIXG00005013123	ENSBIXG00005013438 #22	ENSBIXG00005013487 #22	ENSBIXG00005013505 #22	SDR9C7 (ENSBIXG00005013558) #23	ENSBIXG00005013575	ENSBIXG00005013779 #22	HSD17B6 (ENSBIXG00005013894) #24	PRIM1 (ENSBIXG00005013939) #25	ENSBIXG00005014024 #26	PTGES3 (ENSBIXG00005014081) #27	ATP5F1B (ENSBIXG00005001839) #28	BAZ2A (ENSBIXG00005014206) #29	RBMS2 (ENSBIXG00005000251) #30	GLS2 (ENSBIXG00005014289) #32	SPRYD4 (ENSBIXG00005001889) #33	MIP (ENSBIXG00005014332) #34	TIMELESS (ENSBIXG00005005934) #35	ENSBIXG00005014370 ##36
Bos_a	ANCESTRAL SPECIES	3	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #22	ENSGT00940000162028.a.b #24	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Wild yak	MODERN SPECIES	1313	ENSBMUG00000025768	SHMT2 (ENSBMUG00000025780) #11	NXPH4 (ENSBMUG00000025791) #12	LRP1 (ENSBMUG00000025810) #13	STAT6 (ENSBMUG00000025845) #14	NAB2 (ENSBMUG00000025857) #15	NEMP1 (ENSBMUG00000025867) #16	MYO1A (ENSBMUG00000025873) #17	TAC3 (ENSBMUG00000025885) #18	ZBTB39 (ENSBMUG00000025891) #19	GPR182 (ENSBMUG00000025895) #21	ENSBMUG00000025901	ENSBMUG00000025907 #24	ENSBMUG00000025910 #22	ENSBMUG00000025913 #22	ENSBMUG00000025922 #22	SDR9C7 (ENSBMUG00000025927) #23
American bison	MODERN SPECIES	3043	NDUFA4L2 (ENSBBBG00000012377) #10	SHMT2 (ENSBBBG00000012405) #11	NXPH4 (ENSBBBG00000002374) #12	LRP1 (ENSBBBG00000012523) #13	STAT6 (ENSBBBG00000012670) #14	NAB2 (ENSBBBG00000001815) #15	ENSBBBG00000012717	NEMP1 (ENSBBBG00000012736) #16	MYO1A (ENSBBBG00000007932) #17	TAC3 (ENSBBBG00000012783) #18	ZBTB39 (ENSBBBG00000002475) #19	GPR182 (ENSBBBG00000012789) #21	ENSBBBG00000012805	ENSBBBG00000012808 #22	ENSBBBG00000012963 #22	ENSBBBG00000012989 #22	SDR9C7 (ENSBBBG00000013000) #23	ENSBBBG00000013007	ENSBBBG00000007888 #24	HSD17B6 (ENSBBBG00000013035) #24	PRIM1 (ENSBBBG00000013047) #25	ENSBBBG00000013066 #26	PTGES3 (ENSBBBG00000013107) #27	ATP5F1B (ENSBBBG00000002642) #28	BAZ2A (ENSBBBG00000002669) #29	RBMS2 (ENSBBBG00000013272) #30	GLS2 (ENSBBBG00000013300) #32	SPRYD4 (ENSBBBG00000002703) #33	MIP (ENSBBBG00000013310) #34	TIMELESS (ENSBBBG00000001590) #35	ENSBBBG00000013371 ##36
Siberian musk deer	MODERN SPECIES	1241	R3HDM2 (ENSMMSG00000013912) #8	STAC3 (ENSMMSG00000013843) #9	NDUFA4L2 (ENSMMSG00000013824) #10	ENSMMSG00000013800 #11	NXPH4 (ENSMMSG00000013785) #12	LRP1 (ENSMMSG00000013521) #13	STAT6 (ENSMMSG00000016988) #14	NAB2 (ENSMMSG00000016947) #15	NEMP1 (ENSMMSG00000016873) #16	MYO1A (ENSMMSG00000016701) #17	TAC3 (ENSMMSG00000016614) #18	ZBTB39 (ENSMMSG00000016599) #19	GPR182 (ENSMMSG00000016587) #21	ENSMMSG00000016565 #22	ENSMMSG00000016550	ENSMMSG00000016516 #22	ENSMMSG00000016459 #22	SDR9C7 (ENSMMSG00000016406) #23	ENSMMSG00000016383	ENSMMSG00000016333	HSD17B6 (ENSMMSG00000016311) #24	ENSMMSG00000016273	PRIM1 (ENSMMSG00000016240) #25	ENSMMSG00000016159 #26	ENSMMSG00000015953 #28	ENSMMSG00000015852 #29	RBMS2 (ENSMMSG00000015740) #30	GLS2 (ENSMMSG00000015620) #32	SPRYD4 (ENSMMSG00000015594) #33	MIP (ENSMMSG00000015573) #34	TIMELESS (ENSMMSG00000015470) #35
Pecora	ANCESTRAL SPECIES	3	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10
Percora_a	ANCESTRAL SPECIES	3	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.a #24	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154118.b.rb.b.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13
Bovinae	ANCESTRAL SPECIES	17	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.a #24	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13
Bos	ANCESTRAL SPECIES	2	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11
Bos_b	ANCESTRAL SPECIES	4	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11
Cow	MODERN SPECIES	24	STAT2 (ENSBTAG00000004380) #37	APOF (ENSBTAG00000004384) #36	APON (ENSBTAG00000045969) ##36	TIMELESS (ENSBTAG00000020459) #35	MIP (ENSBTAG00000010127) #34	GLS2 (ENSBTAG00000009284) #32	SPRYD4 (ENSBTAG00000009281) #33	RBMS2 (ENSBTAG00000017830) #30	BAZ2A (ENSBTAG00000017840) #29	ATP5F1B (ENSBTAG00000013315) #28	PTGES3 (ENSBTAG00000017967) #27	ENSBTAG00000055262	NACA (ENSBTAG00000010701) #26	PRIM1 (ENSBTAG00000044000) #25	HSD17B6 (ENSBTAG00000011720) #24	ENSBTAG00000051761 #22	ENSBTAG00000055155	SDR9C7 (ENSBTAG00000013443) #23	RDH16 (ENSBTAG00000001392) #22	ENSBTAG00000050051 #22	ENSBTAG00000049081 #22	GPR182 (ENSBTAG00000039157) #21	ZBTB39 (ENSBTAG00000038498) #19	TAC3 (ENSBTAG00000021807) #18	MYO1A (ENSBTAG00000014655) #17	NEMP1 (ENSBTAG00000014659) #16	ENSBTAG00000031076	NAB2 (ENSBTAG00000006324) #15	STAT6 (ENSBTAG00000006335) #14	LRP1 (ENSBTAG00000010830) #13	NXPH4 (ENSBTAG00000047650) #12
Hybrid Bos Indicus	MODERN SPECIES	24	IL23A (ENSBIXG00005014416)	STAT2 (ENSBIXG00005014399) #37	APOF (ENSBIXG00005014379) #36	ENSBIXG00005014370 ##36	TIMELESS (ENSBIXG00005005934) #35	MIP (ENSBIXG00005014332) #34	SPRYD4 (ENSBIXG00005001889) #33	GLS2 (ENSBIXG00005014289) #32	RBMS2 (ENSBIXG00005000251) #30	BAZ2A (ENSBIXG00005014206) #29	ATP5F1B (ENSBIXG00005001839) #28	PTGES3 (ENSBIXG00005014081) #27	ENSBIXG00005014024 #26	PRIM1 (ENSBIXG00005013939) #25	HSD17B6 (ENSBIXG00005013894) #24	ENSBIXG00005013779 #22	ENSBIXG00005013575	SDR9C7 (ENSBIXG00005013558) #23	ENSBIXG00005013505 #22	ENSBIXG00005013487 #22	ENSBIXG00005013438 #22	ENSBIXG00005013123	GPR182 (ENSBIXG00005013112) #21	ZBTB39 (ENSBIXG00005013102) #19	TAC3 (ENSBIXG00005013089) #18	MYO1A (ENSBIXG00005013026) #17	NEMP1 (ENSBIXG00005012888) #16	NAB2 (ENSBIXG00005007004) #15	STAT6 (ENSBIXG00005001415) #14	LRP1 (ENSBIXG00005012721) #13	NXPH4 (ENSBIXG00005012677) #12
Bos_a	ANCESTRAL SPECIES	3	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000154118.b.rb.a.b #22	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.a #24	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13
Wild yak	MODERN SPECIES	1528	IL23A (ENSBMUG00000018083)	STAT2 (ENSBMUG00000018117) #37	APOF (ENSBMUG00000018139) #36	ENSBMUG00000018152 ##36	TIMELESS (ENSBMUG00000018192) #35	MIP (ENSBMUG00000018233) #34	SPRYD4 (ENSBMUG00000018242) #33	GLS2 (ENSBMUG00000018274) #32	RBMS2 (ENSBMUG00000018323) #30	BAZ2A (ENSBMUG00000018464) #29	ATP5F1B (ENSBMUG00000018553) #28	PTGES3 (ENSBMUG00000018662) #27	ENSBMUG00000018759 #26	PRIM1 (ENSBMUG00000018797) #25	HSD17B6 (ENSBMUG00000018818) #24	ENSBMUG00000018847 #22	ENSBMUG00000018859
Domestic yak	MODERN SPECIES	24	APOF (ENSBGRG00000002880) #36	ENSBGRG00000002887 ##36	TIMELESS (ENSBGRG00000002908) #35	MIP (ENSBGRG00000002930) #34	SPRYD4 (ENSBGRG00000002935) #33	GLS2 (ENSBGRG00000002966) #32	RBMS2 (ENSBGRG00000003102) #30	BAZ2A (ENSBGRG00000003190) #29	ATP5F1B (ENSBGRG00000003323) #28	ENSBGRG00000003401 #27	ENSBGRG00000003503	ENSBGRG00000003514 #26	PRIM1 (ENSBGRG00000003542) #25	HSD17B6 (ENSBGRG00000003564) #24	ENSBGRG00000003589 #24	ENSBGRG00000003600 #22	ENSBGRG00000003614	SDR9C7 (ENSBGRG00000003657) #23	ENSBGRG00000003774 #22	ENSBGRG00000003798 #22	ENSBGRG00000003844 #24	ENSBGRG00000003857	GPR182 (ENSBGRG00000003907) #21	ZBTB39 (ENSBGRG00000003920) #19	ENSBGRG00000003965 #18	MYO1A (ENSBGRG00000004047) #17	NEMP1 (ENSBGRG00000004148) #16	ENSBGRG00000004233	ENSBGRG00000004255	NAB2 (ENSBGRG00000004277) #15	STAT6 (ENSBGRG00000004366) #14
Caprinae	ANCESTRAL SPECIES		ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00500000045104.h ##36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256.yb #27	ENSGT00440000033468.c.b.r ##26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b.sb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.rb.b.b #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.rb.a.a #22	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154118.b.rb.b.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12
Goat	MODERN SPECIES	24	STAT2 (ENSCHIG00000016058) #37	APOF (ENSCHIG00000022892) #36	ENSCHIG00000002500 ##36	TIMELESS (ENSCHIG00000010689) #35	MIP (ENSCHIG00000013963) #34	SPRYD4 (ENSCHIG00000021196) #33	GLS2 (ENSCHIG00000009891) #32	ENSCHIG00000017636	RBMS2 (ENSCHIG00000020791) #30	BAZ2A (ENSCHIG00000025797) #29	ATP5F1B (ENSCHIG00000010757) #28	ENSCHIG00000011269 #27	ENSCHIG00000013646 ##26	PRIM1 (ENSCHIG00000026915) #25	HSD17B6 (ENSCHIG00000012163) #24	ENSCHIG00000027068 #22	ENSCHIG00000008219	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000022462 #22	ENSCHIG00000025887 #22	ENSCHIG00000010628 #22	ENSCHIG00000024299 #22	ENSCHIG00000012307	GPR182 (ENSCHIG00000008110) #21	ZBTB39 (ENSCHIG00000001253) #19	TAC3 (ENSCHIG00000026341) #18	MYO1A (ENSCHIG00000011774) #17	NEMP1 (ENSCHIG00000015757) #16	NAB2 (ENSCHIG00000019285) #15	STAT6 (ENSCHIG00000025666) #14	LRP1 (ENSCHIG00000024408) #13
Yarkand deer	MODERN SPECIES	22	IL23A (ENSCHYG00000003289)	STAT2 (ENSCHYG00000003249) #37	APOF (ENSCHYG00000003234) #36	ENSCHYG00000003221 ##36	TIMELESS (ENSCHYG00000003196) #35	MIP (ENSCHYG00000003178) #34	SPRYD4 (ENSCHYG00000003172) #33	GLS2 (ENSCHYG00000003128) #32	RBMS2 (ENSCHYG00000003089) #30	BAZ2A (ENSCHYG00000002971) #29	ATP5F1B (ENSCHYG00000002934) #28	ENSCHYG00000002851 #27	ENSCHYG00000002804 #26	PRIM1 (ENSCHYG00000002764) #25	HSD17B6 (ENSCHYG00000002745) #24	ENSCHYG00000002650 #22	SDR9C7 (ENSCHYG00000002626) #23	RDH16 (ENSCHYG00000002593) #22	ENSCHYG00000002565 #24	GPR182 (ENSCHYG00000002559) #21	ZBTB39 (ENSCHYG00000002554) #19	TAC3 (ENSCHYG00000002535) #18	MYO1A (ENSCHYG00000002446) #17	NEMP1 (ENSCHYG00000002376) #16	NAB2 (ENSCHYG00000002341) #15	STAT6 (ENSCHYG00000002302) #14	LRP1 (ENSCHYG00000002067) #13	NXPH4 (ENSCHYG00000002015) #12	SHMT2 (ENSCHYG00000001992) #11	NDUFA4L2 (ENSCHYG00000001961) #10	STAC3 (ENSCHYG00000001908) #9
Suina	ANCESTRAL SPECIES	4	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000162028.a.a #24	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.d ##26	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800.u #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.h ##36
Chacoan peccary	MODERN SPECIES	900																ENSCWAG00000003947 #22	ENSCWAG00000003974 #24	SDR9C7 (ENSCWAG00000003991) #23	HSD17B6 (ENSCWAG00000004028) #24	PRIM1 (ENSCWAG00000004065) #25	ENSCWAG00000004123 #26	PTGES3 (ENSCWAG00000004197) #27	ENSCWAG00000004335 #28	BAZ2A (ENSCWAG00000004421) #29	RBMS2 (ENSCWAG00000004720) #30	GLS2 (ENSCWAG00000004785) #32	SPRYD4 (ENSCWAG00000004942) #33	MIP (ENSCWAG00000004953) #34	TIMELESS (ENSCWAG00000004988) #35	ENSCWAG00000005148 ##36	APOF (ENSCWAG00000005160) #36
Pig	DUPLICATION
Pig	DUPLICATION
Pig	DUPLICATION
Pig	DUPLICATION
Pig	MODERN SPECIES	13	INHBC (ENSSSCG00000037446)	ENSSSCG00000051626	R3HDM2 (ENSSSCG00000026498) #8	NDUFA4L2 (ENSSSCG00000027621) #10	SHMT2 (ENSSSCG00000037077) #11	NXPH4 (ENSSSCG00000039966) #12	ENSSSCG00000050398 #13	STAT6 (ENSSSCG00000040435) #14	NAB2 (ENSSSCG00000000411) #15	NEMP1 (ENSSSCG00000025542) #16	MYO1A (ENSSSCG00000000413) #17	TAC3 (ENSSSCG00000055762) #18	ZBTB39 (ENSSSCG00000037617) #19	GPR182 (ENSSSCG00000037701) #21	ENSSSCG00000000419 #22	ENSSSCG00000052399 #22	ENSSSCG00000052944 #22	RDH16 (ENSSSCG00000052675) #22	SDR9C7 (ENSSSCG00000000415) #23	ENSSSCG00000031735 #22	HSD17B6 (ENSSSCG00000027854) #24	PRIM1 (ENSSSCG00000026055) #25	ENSSSCG00000020830 ##26	PTGES3 (ENSSSCG00000000406) #27	ENSSSCG00000000405 #28	BAZ2A (ENSSSCG00000000403) #29	ENSSSCG00000063415	RBMS2 (ENSSSCG00000000402) #30	GLS2 (ENSSSCG00000000401) #32	SPRYD4 (ENSSSCG00000028066) #33	MIP (ENSSSCG00000000400) #34
Pig	MODERN SPECIES	13	INHBE (ENSSSCG00000000442)	INHBC (ENSSSCG00000037446)	ENSSSCG00000051626	R3HDM2 (ENSSSCG00000026498) #8	NDUFA4L2 (ENSSSCG00000027621) #10	SHMT2 (ENSSSCG00000037077) #11	NXPH4 (ENSSSCG00000039966) #12	ENSSSCG00000050398 #13	STAT6 (ENSSSCG00000040435) #14	NAB2 (ENSSSCG00000000411) #15	NEMP1 (ENSSSCG00000025542) #16	MYO1A (ENSSSCG00000000413) #17	TAC3 (ENSSSCG00000055762) #18	ZBTB39 (ENSSSCG00000037617) #19	GPR182 (ENSSSCG00000037701) #21	ENSSSCG00000000419 #22	ENSSSCG00000052399 #22	ENSSSCG00000052944 #22	RDH16 (ENSSSCG00000052675) #22	SDR9C7 (ENSSSCG00000000415) #23	ENSSSCG00000031735 #22	HSD17B6 (ENSSSCG00000027854) #24	PRIM1 (ENSSSCG00000026055) #25	ENSSSCG00000020830 ##26	PTGES3 (ENSSSCG00000000406) #27	ENSSSCG00000000405 #28	BAZ2A (ENSSSCG00000000403) #29	ENSSSCG00000063415	RBMS2 (ENSSSCG00000000402) #30	GLS2 (ENSSSCG00000000401) #32	SPRYD4 (ENSSSCG00000028066) #33
Pig	MODERN SPECIES	13	ENSSSCG00000051626	R3HDM2 (ENSSSCG00000026498) #8	NDUFA4L2 (ENSSSCG00000027621) #10	SHMT2 (ENSSSCG00000037077) #11	NXPH4 (ENSSSCG00000039966) #12	ENSSSCG00000050398 #13	STAT6 (ENSSSCG00000040435) #14	NAB2 (ENSSSCG00000000411) #15	NEMP1 (ENSSSCG00000025542) #16	MYO1A (ENSSSCG00000000413) #17	TAC3 (ENSSSCG00000055762) #18	ZBTB39 (ENSSSCG00000037617) #19	GPR182 (ENSSSCG00000037701) #21	ENSSSCG00000000419 #22	ENSSSCG00000052399 #22	ENSSSCG00000052944 #22	RDH16 (ENSSSCG00000052675) #22	SDR9C7 (ENSSSCG00000000415) #23	ENSSSCG00000031735 #22	HSD17B6 (ENSSSCG00000027854) #24	PRIM1 (ENSSSCG00000026055) #25	ENSSSCG00000020830 ##26	PTGES3 (ENSSSCG00000000406) #27	ENSSSCG00000000405 #28	BAZ2A (ENSSSCG00000000403) #29	ENSSSCG00000063415	RBMS2 (ENSSSCG00000000402) #30	GLS2 (ENSSSCG00000000401) #32	SPRYD4 (ENSSSCG00000028066) #33	MIP (ENSSSCG00000000400) #34	TIMELESS (ENSSSCG00000000399) #35
Pig	MODERN SPECIES	13	R3HDM2 (ENSSSCG00000026498) #8	NDUFA4L2 (ENSSSCG00000027621) #10	SHMT2 (ENSSSCG00000037077) #11	NXPH4 (ENSSSCG00000039966) #12	ENSSSCG00000050398 #13	STAT6 (ENSSSCG00000040435) #14	NAB2 (ENSSSCG00000000411) #15	NEMP1 (ENSSSCG00000025542) #16	MYO1A (ENSSSCG00000000413) #17	TAC3 (ENSSSCG00000055762) #18	ZBTB39 (ENSSSCG00000037617) #19	GPR182 (ENSSSCG00000037701) #21	ENSSSCG00000000419 #22	ENSSSCG00000052399 #22	ENSSSCG00000052944 #22	RDH16 (ENSSSCG00000052675) #22	SDR9C7 (ENSSSCG00000000415) #23	ENSSSCG00000031735 #22	HSD17B6 (ENSSSCG00000027854) #24	PRIM1 (ENSSSCG00000026055) #25	ENSSSCG00000020830 ##26	PTGES3 (ENSSSCG00000000406) #27	ENSSSCG00000000405 #28	BAZ2A (ENSSSCG00000000403) #29	ENSSSCG00000063415	RBMS2 (ENSSSCG00000000402) #30	GLS2 (ENSSSCG00000000401) #32	SPRYD4 (ENSSSCG00000028066) #33	MIP (ENSSSCG00000000400) #34	TIMELESS (ENSSSCG00000000399) #35	APOF (ENSSSCG00000000398) ##36
Pig	MODERN SPECIES	13	IL23A (ENSSSCG00000033520)	STAT2 (ENSSSCG00000000396) #37	APOF (ENSSSCG00000000398) ##36	TIMELESS (ENSSSCG00000000399) #35	MIP (ENSSSCG00000000400) #34	SPRYD4 (ENSSSCG00000028066) #33	GLS2 (ENSSSCG00000000401) #32	RBMS2 (ENSSSCG00000000402) #30	ENSSSCG00000063415	BAZ2A (ENSSSCG00000000403) #29	ENSSSCG00000000405 #28	PTGES3 (ENSSSCG00000000406) #27	ENSSSCG00000020830 ##26	PRIM1 (ENSSSCG00000026055) #25	HSD17B6 (ENSSSCG00000027854) #24	ENSSSCG00000031735 #22	SDR9C7 (ENSSSCG00000000415) #23	RDH16 (ENSSSCG00000052675) #22	ENSSSCG00000052944 #22	ENSSSCG00000052399 #22	ENSSSCG00000000419 #22	GPR182 (ENSSSCG00000037701) #21	ZBTB39 (ENSSSCG00000037617) #19	TAC3 (ENSSSCG00000055762) #18	MYO1A (ENSSSCG00000000413) #17	NEMP1 (ENSSSCG00000025542) #16	NAB2 (ENSSSCG00000000411) #15	STAT6 (ENSSSCG00000040435) #14	ENSSSCG00000050398 #13	NXPH4 (ENSSSCG00000039966) #12	SHMT2 (ENSSSCG00000037077) #11
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Ursus	ANCESTRAL SPECIES	23	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
American black bear	MODERN SPECIES	7562													TAC3 (ENSUAMG00000010864) #18	ZBTB39 (ENSUAMG00000010863) #19	GPR182 (ENSUAMG00000010861) #21	RDH16 (ENSUAMG00000010858) #22	SDR9C7 (ENSUAMG00000010855) #23	ENSUAMG00000010850 #24
Polar bear	MODERN SPECIES	113	ARHGAP9 (ENSUMAG00000019809)	GLI1 (ENSUMAG00000019787)	INHBE (ENSUMAG00000019781)	INHBC (ENSUMAG00000019778)	R3HDM2 (ENSUMAG00000019179) #8	STAC3 (ENSUMAG00000019103) #9	NDUFA4L2 (ENSUMAG00000019098) #10	SHMT2 (ENSUMAG00000019095) #11	LRP1 (ENSUMAG00000018098) #13	STAT6 (ENSUMAG00000017856) #14	NAB2 (ENSUMAG00000017844) #15	NEMP1 (ENSUMAG00000017823) #16	MYO1A (ENSUMAG00000017779) #17	TAC3 (ENSUMAG00000017770) #18	ZBTB39 (ENSUMAG00000017768) #19	RDH16 (ENSUMAG00000017762) #22	ENSUMAG00000017756 #24	PRIM1 (ENSUMAG00000017750) #25	HSD17B6 (ENSUMAG00000017746) #24	ENSUMAG00000017739 #26	PTGES3 (ENSUMAG00000017733) #27	ATP5F1B (ENSUMAG00000017709) #28	BAZ2A (ENSUMAG00000017488) #29	RBMS2 (ENSUMAG00000017426) #30	GLS2 (ENSUMAG00000017313) #32	SPRYD4 (ENSUMAG00000017278) #33	MIP (ENSUMAG00000017267) #34	TIMELESS (ENSUMAG00000017082) #35	APOF (ENSUMAG00000017052) #36	STAT2 (ENSUMAG00000017043) #37	IL23A (ENSUMAG00000017034)
Giant Panda	MODERN SPECIES	6	INHBE (ENSAMEG00000025669)	INHBC (ENSAMEG00000004873)	R3HDM2 (ENSAMEG00000004812) #8	STAC3 (ENSAMEG00000004787) #9	NDUFA4L2 (ENSAMEG00000004785) #10	SHMT2 (ENSAMEG00000004736) #11	NXPH4 (ENSAMEG00000026081) #12	LRP1 (ENSAMEG00000004561) #13	STAT6 (ENSAMEG00000004487) #14	NAB2 (ENSAMEG00000004458) #15	NEMP1 (ENSAMEG00000004429) #16	MYO1A (ENSAMEG00000004303) #17	ENSAMEG00000004296 #18	ZBTB39 (ENSAMEG00000019393) #19	GPR182 (ENSAMEG00000019381) #21	RDH16 (ENSAMEG00000004269) #22	SDR9C7 (ENSAMEG00000004266) #23	HSD17B6 (ENSAMEG00000004236) #24	PRIM1 (ENSAMEG00000004198) #25	NACA (ENSAMEG00000026887) #26	ATP5F1B (ENSAMEG00000004135) #28	BAZ2A (ENSAMEG00000004115) #29	RBMS2 (ENSAMEG00000004054) #30	GLS2 (ENSAMEG00000004014) #32	SPRYD4 (ENSAMEG00000004011) #33	MIP (ENSAMEG00000003992) #34	TIMELESS (ENSAMEG00000003946) #35	ENSAMEG00000003941 #36	STAT2 (ENSAMEG00000003886) #37	IL23A (ENSAMEG00000026605)	PAN2 (ENSAMEG00000003824)
Mustelinae	ANCESTRAL SPECIES	61	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.b ##26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250.g #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Ferret	MODERN SPECIES	340	GLI1 (ENSMPUG00000001825)	INHBC (ENSMPUG00000001822)	R3HDM2 (ENSMPUG00000001818) #8	STAC3 (ENSMPUG00000001790) #9	NDUFA4L2 (ENSMPUG00000001775) #10	SHMT2 (ENSMPUG00000001772) #11	NXPH4 (ENSMPUG00000001769) #12	LRP1 (ENSMPUG00000001753) #13	STAT6 (ENSMPUG00000001746) #14	NAB2 (ENSMPUG00000001738) #15	NEMP1 (ENSMPUG00000001732) #16	MYO1A (ENSMPUG00000001720) #17	TAC3 (ENSMPUG00000001702) #18	ZBTB39 (ENSMPUG00000018500) #19	GPR182 (ENSMPUG00000018498) #21	RDH16 (ENSMPUG00000001697) #22	SDR9C7 (ENSMPUG00000001689) #23	ENSMPUG00000001685	ENSMPUG00000001683	HSD17B6 (ENSMPUG00000001678) #24	PRIM1 (ENSMPUG00000001603) #25	ENSMPUG00000001597 ##26	ENSMPUG00000001589 #27	ATP5F1B (ENSMPUG00000001507) #28	BAZ2A (ENSMPUG00000001495) #29	ENSMPUG00000001490 #30	SPRYD4 (ENSMPUG00000001489) #33	GLS2 (ENSMPUG00000001477) #32	MIP (ENSMPUG00000001456) #34	ENSMPUG00000001445	APOF (ENSMPUG00000001442) #36
American mink	MODERN SPECIES	76	GLI1 (ENSNVIG00000002001)	INHBE (ENSNVIG00000001991)	INHBC (ENSNVIG00000001984)	R3HDM2 (ENSNVIG00000001463) #8	STAC3 (ENSNVIG00000001387) #9	NDUFA4L2 (ENSNVIG00000001364) #10	SHMT2 (ENSNVIG00000001327) #11	LRP1 (ENSNVIG00000001177) #13	STAT6 (ENSNVIG00000000975) #14	NAB2 (ENSNVIG00000000943) #15	NEMP1 (ENSNVIG00000000911) #16	MYO1A (ENSNVIG00000000859) #17	TKNK (ENSNVIG00000000821) #18	ZBTB39 (ENSNVIG00000000815) #19	GPR182 (ENSNVIG00000000799) #21	RDH16 (ENSNVIG00000000791) #22	SDR9C7 (ENSNVIG00000000787) #23	ENSNVIG00000000778 #24	ENSNVIG00000000760 #25	ENSNVIG00000000749	PTGES3 (ENSNVIG00000000620) #27	ATP5F1B (ENSNVIG00000000601) #28	ENSNVIG00000000598 #29	ENSNVIG00000000554 #29	RBMS2 (ENSNVIG00000000449) #30	GLS2 (ENSNVIG00000000366) #32	SPRYD4 (ENSNVIG00000000358) #33	MIP (ENSNVIG00000000352) #34	TIMELESS (ENSNVIG00000000326) #35	APOF (ENSNVIG00000000322) #36	STAT2 (ENSNVIG00000000267) #37
Canidae	ANCESTRAL SPECIES	44	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.d ##26	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT01050000245459	ENSGT00500000045104.g #36
Canis_lupus	ANCESTRAL SPECIES	40	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000018018.ib.a	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000164082	ENSGT00940000156260 #34	ENSGT01050000245459	ENSGT00500000045104.g #36
Dingo	MODERN SPECIES	374	INHBE (ENSCAFG00020023673)	INHBC (ENSCAFG00020023675)	R3HDM2 (ENSCAFG00020023713) #8	STAC3 (ENSCAFG00020023919) #9	NDUFA4L2 (ENSCAFG00020023921) #10	SHMT2 (ENSCAFG00020023922) #11	NXPH4 (ENSCAFG00020023924) #12	LRP1 (ENSCAFG00020023946) #13	STAT6 (ENSCAFG00020024215) #14	NAB2 (ENSCAFG00020024217) #15	NEMP1 (ENSCAFG00020024218) #16	MYO1A (ENSCAFG00020024230) #17	TAC3 (ENSCAFG00020024234) #18	ZBTB39 (ENSCAFG00020024236) #19	GPR182 (ENSCAFG00020024237) #21	RDH16 (ENSCAFG00020024238) #22	SDR9C7 (ENSCAFG00020024239) #23	HSD17B6 (ENSCAFG00020024242) #24	PRIM1 (ENSCAFG00020024246) #25	ENSCAFG00020024247 #26	PTGES3 (ENSCAFG00020024254) #27	ATP5F1B (ENSCAFG00020024257) #28	BAZ2A (ENSCAFG00020024281) #29	RBMS2 (ENSCAFG00020024460) #30	ENSCAFG00020024463	GLS2 (ENSCAFG00020024477) #32	SPRYD4 (ENSCAFG00020024734) #33	ENSCAFG00020024736	MIP (ENSCAFG00020024739) #34	ENSCAFG00020024754	STAT2 (ENSCAFG00020024840) #37
Dog	MODERN SPECIES	1	GLI1 (ENSCAFG00845011836)	INHBE (ENSCAFG00845011799)	INHBC (ENSCAFG00845011778)	R3HDM2 (ENSCAFG00845010738) #8	NDUFA4L2 (ENSCAFG00845010422) #10	SHMT2 (ENSCAFG00845010365) #11	NXPH4 (ENSCAFG00845010342) #12	LRP1 (ENSCAFG00845010106) #13	STAT6 (ENSCAFG00845009828) #14	NAB2 (ENSCAFG00845009686) #15	NEMP1 (ENSCAFG00845009633) #16	TAC3 (ENSCAFG00845009491) #17	ENSCAFG00845009429 #18	ZBTB39 (ENSCAFG00845009407) #19	GPR182 (ENSCAFG00845009393) #21	RDH16 (ENSCAFG00845009333) #22	SDR9C7 (ENSCAFG00845009288) #23	HSD17B6 (ENSCAFG00845009238) #24	PRIM1 (ENSCAFG00845009163) #25	NACA (ENSCAFG00845009133) ##26	ATP5F1B (ENSCAFG00845008893) #28	RBMS2 (ENSCAFG00845008621) #30	ENSCAFG00845008578	GLS2 (ENSCAFG00845008418) #32	SPRYD4 (ENSCAFG00845008355) #33	ENSCAFG00845008341	MIP (ENSCAFG00845008298) #34	TIMELESS (ENSCAFG00845008229)	APOF (ENSCAFG00845008198) #36	STAT2 (ENSCAFG00845008098) #37	IL23A (ENSCAFG00845008036)
Red fox	MODERN SPECIES	38	INHBE (ENSVVUG00000017976)	INHBC (ENSVVUG00000017986)	R3HDM2 (ENSVVUG00000018014) #8	ENSVVUG00000018131	SHMT2 (ENSVVUG00000018132) #11	NXPH4 (ENSVVUG00000018138) #12	LRP1 (ENSVVUG00000018159) #13	STAT6 (ENSVVUG00000018501) #14	NAB2 (ENSVVUG00000019302) #15	NEMP1 (ENSVVUG00000019316) #16	MYO1A (ENSVVUG00000019418) #17	ENSVVUG00000020802 #18	ZBTB39 (ENSVVUG00000020803) #19	GPR182 (ENSVVUG00000020804) #21	ENSVVUG00000020807 #24	ENSVVUG00000020809 #22	SDR9C7 (ENSVVUG00000020813) #23	HSD17B6 (ENSVVUG00000020818) #24	PRIM1 (ENSVVUG00000020823) #25	ENSVVUG00000020829 ##26	ENSVVUG00000020831 #27	ATP5F1B (ENSVVUG00000020852) #28	BAZ2A (ENSVVUG00000020881) #29	RBMS2 (ENSVVUG00000021554) #30	GLS2 (ENSVVUG00000021555) #32	SPRYD4 (ENSVVUG00000021557) #33	ENSVVUG00000021558	MIP (ENSVVUG00000021559) #34	TIMELESS (ENSVVUG00000021563) #35	STAT2 (ENSVVUG00000021580) #37	IL23A (ENSVVUG00000021877)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Panthera	ANCESTRAL SPECIES		ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT01050000245459	ENSGT01050000244905.C #37	ENSGT00390000006482
Tiger	MODERN SPECIES	160				R3HDM2 (ENSPTIG00000008752) #8	STAC3 (ENSPTIG00000008442) #9	NDUFA4L2 (ENSPTIG00000008275) #10	SHMT2 (ENSPTIG00000008037) #11	ENSPTIG00000006559 #13	STAT6 (ENSPTIG00000000983) #14	NAB2 (ENSPTIG00000021268) #15	NEMP1 (ENSPTIG00000021161) #16	MYO1A (ENSPTIG00000020954) #17	TAC3 (ENSPTIG00000020761) #18	ZBTB39 (ENSPTIG00000006437) #19	ENSPTIG00000020569 #24	RDH16 (ENSPTIG00000020198) #22	SDR9C7 (ENSPTIG00000020147) #23	HSD17B6 (ENSPTIG00000020042) #24	PRIM1 (ENSPTIG00000019991) #25	ENSPTIG00000019812 ##26	PTGES3 (ENSPTIG00000019339) #27	ATP5F1B (ENSPTIG00000019256) #28	BAZ2A (ENSPTIG00000018184) #29	RBMS2 (ENSPTIG00000017925) #30	GLS2 (ENSPTIG00000017548) #32	SPRYD4 (ENSPTIG00000017452) #33	MIP (ENSPTIG00000017418) #34	ENSPTIG00000016933	ENSPTIG00000006370	STAT2 (ENSPTIG00000015130) #37	IL23A (ENSPTIG00000015077)
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT01050000245459	ENSGT01050000244905.C #37	ENSGT00390000006482
lion	MODERN SPECIES	357																RDH16 (ENSPLOG00000020090) #22
leopard	MODERN SPECIES	27	INHBE (ENSPPRG00000006149)	INHBC (ENSPPRG00000006339)	R3HDM2 (ENSPPRG00000009240) #8	STAC3 (ENSPPRG00000009695) #9	NDUFA4L2 (ENSPPRG00000010214) #10	SHMT2 (ENSPPRG00000013185) #11	NXPH4 (ENSPPRG00000013279) #12	LRP1 (ENSPPRG00000002876) #13	STAT6 (ENSPPRG00000006529) #14	NAB2 (ENSPPRG00000007034) #15	NEMP1 (ENSPPRG00000008388) #16	MYO1A (ENSPPRG00000010635) #17	TAC3 (ENSPPRG00000011571) #18	ZBTB39 (ENSPPRG00000019325) #19	ENSPPRG00000012314 #24	RDH16 (ENSPPRG00000012691) #22	SDR9C7 (ENSPPRG00000012977) #23	HSD17B6 (ENSPPRG00000014390) #24	PRIM1 (ENSPPRG00000015766) #25	ENSPPRG00000017562 #26	ENSPPRG00000023429 #27	ATP5F1B (ENSPPRG00000022752) #28	BAZ2A (ENSPPRG00000006678) #29	RBMS2 (ENSPPRG00000007678) #30	GLS2 (ENSPPRG00000008872) #32	SPRYD4 (ENSPPRG00000009022) #33	MIP (ENSPPRG00000009463) #34	ENSPPRG00000011001	STAT2 (ENSPPRG00000017893) #37	IL23A (ENSPPRG00000018623)	PAN2 (ENSPPRG00000021586)
Cat	MODERN SPECIES	238	INHBE (ENSFCAG00000003217)	INHBC (ENSFCAG00000032733)	R3HDM2 (ENSFCAG00000000192) #8	STAC3 (ENSFCAG00000000190) #9	NDUFA4L2 (ENSFCAG00000000189) #10	SHMT2 (ENSFCAG00000000188) #11	NXPH4 (ENSFCAG00000045731) #12	LRP1 (ENSFCAG00000000185) #13	STAT6 (ENSFCAG00000014571) #14	NAB2 (ENSFCAG00000022519) #15	NEMP1 (ENSFCAG00000024952) #16	MYO1A (ENSFCAG00000014568) #17	TAC3 (ENSFCAG00000014566) #18	ZBTB39 (ENSFCAG00000005613) #19	GPR182 (ENSFCAG00000045279) #21	RDH16 (ENSFCAG00000014562) #22	SDR9C7 (ENSFCAG00000032766) #23	HSD17B6 (ENSFCAG00000000899) #24	PRIM1 (ENSFCAG00000006964) #25	ENSFCAG00000038588 #26	ENSFCAG00000048175	PTGES3 (ENSFCAG00000006110) #27	ATP5F1B (ENSFCAG00000012030) #28	BAZ2A (ENSFCAG00000012029) #29	RBMS2 (ENSFCAG00000012028) #30	GLS2 (ENSFCAG00000012027) #32	SPRYD4 (ENSFCAG00000023005) #33	MIP (ENSFCAG00000012025) #34	TIMELESS (ENSFCAG00000012024) #35	APOF (ENSFCAG00000028837) #36	STAT2 (ENSFCAG00000012023) #37
Laurasiatheria_c	DUPLICATION
Laurasiatheria_c	DUPLICATION
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.vb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00940000154118.b.vb.b #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.wb #22	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.vb.a #22	ENSGT00940000161764 #23	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b.vb.a #22	ENSGT00940000161764 #23	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482	ENSGT00390000013978.d
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1056	INHBE (ENSMLUG00000001009)	INHBC (ENSMLUG00000001006)	R3HDM2 (ENSMLUG00000004980) #8	STAC3 (ENSMLUG00000004969) #9	NDUFA4L2 (ENSMLUG00000004963) #10	SHMT2 (ENSMLUG00000004955) #11	ENSMLUG00000006731 #13	ENSMLUG00000030361	STAT6 (ENSMLUG00000006689) #14	NAB2 (ENSMLUG00000006662) #15	NEMP1 (ENSMLUG00000000419) #16	MYO1A (ENSMLUG00000000404) #17	ZBTB39 (ENSMLUG00000000390) #19	GPR182 (ENSMLUG00000024401) #21	ENSMLUG00000023673 #22	ENSMLUG00000027072 #22	ENSMLUG00000000374 #22	SDR9C7 (ENSMLUG00000011015) #23	PRIM1 (ENSMLUG00000016776) #25	ENSMLUG00000001169 #26	PTGES3 (ENSMLUG00000015927) #27	ATP5F1B (ENSMLUG00000016195) #28	ENSMLUG00000000546 #29	ENSMLUG00000026475 #29	RBMS2 (ENSMLUG00000000530) #30	ENSMLUG00000024707	GLS2 (ENSMLUG00000006854) #32	SPRYD4 (ENSMLUG00000006850) #33	ENSMLUG00000008153	MIP (ENSMLUG00000006844) #34	TIMELESS (ENSMLUG00000006822) #35
Microbat	MODERN SPECIES	1056	GLI1 (ENSMLUG00000001013)	INHBE (ENSMLUG00000001009)	INHBC (ENSMLUG00000001006)	R3HDM2 (ENSMLUG00000004980) #8	STAC3 (ENSMLUG00000004969) #9	NDUFA4L2 (ENSMLUG00000004963) #10	SHMT2 (ENSMLUG00000004955) #11	ENSMLUG00000006731 #13	ENSMLUG00000030361	STAT6 (ENSMLUG00000006689) #14	NAB2 (ENSMLUG00000006662) #15	NEMP1 (ENSMLUG00000000419) #16	MYO1A (ENSMLUG00000000404) #17	ZBTB39 (ENSMLUG00000000390) #19	GPR182 (ENSMLUG00000024401) #21	ENSMLUG00000023673 #22	ENSMLUG00000027072 #22	ENSMLUG00000000374 #22	SDR9C7 (ENSMLUG00000011015) #23	PRIM1 (ENSMLUG00000016776) #25	ENSMLUG00000001169 #26	PTGES3 (ENSMLUG00000015927) #27	ATP5F1B (ENSMLUG00000016195) #28	ENSMLUG00000000546 #29	ENSMLUG00000026475 #29	RBMS2 (ENSMLUG00000000530) #30	ENSMLUG00000024707	GLS2 (ENSMLUG00000006854) #32	SPRYD4 (ENSMLUG00000006850) #33	ENSMLUG00000008153	MIP (ENSMLUG00000006844) #34
Microbat	MODERN SPECIES	1056	INHBC (ENSMLUG00000001006)	R3HDM2 (ENSMLUG00000004980) #8	STAC3 (ENSMLUG00000004969) #9	NDUFA4L2 (ENSMLUG00000004963) #10	SHMT2 (ENSMLUG00000004955) #11	ENSMLUG00000006731 #13	ENSMLUG00000030361	STAT6 (ENSMLUG00000006689) #14	NAB2 (ENSMLUG00000006662) #15	NEMP1 (ENSMLUG00000000419) #16	MYO1A (ENSMLUG00000000404) #17	ZBTB39 (ENSMLUG00000000390) #19	GPR182 (ENSMLUG00000024401) #21	ENSMLUG00000023673 #22	ENSMLUG00000027072 #22	ENSMLUG00000000374 #22	SDR9C7 (ENSMLUG00000011015) #23	PRIM1 (ENSMLUG00000016776) #25	ENSMLUG00000001169 #26	PTGES3 (ENSMLUG00000015927) #27	ATP5F1B (ENSMLUG00000016195) #28	ENSMLUG00000000546 #29	ENSMLUG00000026475 #29	RBMS2 (ENSMLUG00000000530) #30	ENSMLUG00000024707	GLS2 (ENSMLUG00000006854) #32	SPRYD4 (ENSMLUG00000006850) #33	ENSMLUG00000008153	MIP (ENSMLUG00000006844) #34	TIMELESS (ENSMLUG00000006822) #35	APOF (ENSMLUG00000006814) #36
Greater horseshoe bat	MODERN SPECIES	1	INHBC (ENSRFEG00010013503)	R3HDM2 (ENSRFEG00010013259) #8	STAC3 (ENSRFEG00010013129) #9	NDUFA4L2 (ENSRFEG00010013025) #10	SHMT2 (ENSRFEG00010012928) #11	NXPH4 (ENSRFEG00010012875) #12	LRP1 (ENSRFEG00010011635) #13	STAT6 (ENSRFEG00010011526) #14	NAB2 (ENSRFEG00010011442) #15	ENSRFEG00010011417	NEMP1 (ENSRFEG00010011322) #16	MYO1A (ENSRFEG00010011248) #17	TAC3 (ENSRFEG00010011154) #18	ZBTB39 (ENSRFEG00010011129) #19	GPR182 (ENSRFEG00010011107) #21	RDH16 (ENSRFEG00010010987) #22	SDR9C7 (ENSRFEG00010010912) #23	PRIM1 (ENSRFEG00010010857) #25	ENSRFEG00010010764 ##26	ENSRFEG00010010712	ENSRFEG00010010659 #27	ATP5F1B (ENSRFEG00010010570) #28	BAZ2A (ENSRFEG00010009982) #29	RBMS2 (ENSRFEG00010009809) #30	GLS2 (ENSRFEG00010009734) #32	SPRYD4 (ENSRFEG00010009705) #33	ENSRFEG00010009680	MIP (ENSRFEG00010009638) #34	TIMELESS (ENSRFEG00010009600) #35	APOF (ENSRFEG00010009558) #36	STAT2 (ENSRFEG00010009437) #37
Equus	ANCESTRAL SPECIES	43	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.vb.b.a.a #22	ENSGT00940000154118.b.vb.a #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.wb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37
Donkey	MODERN SPECIES	14	LRP1 (ENSEASG00005006612) #13	STAT6 (ENSEASG00005006402) #14	NAB2 (ENSEASG00005006368) #15	NEMP1 (ENSEASG00005006360) #16	MYO1A (ENSEASG00005006355) #17	TAC3 (ENSEASG00005006352) #18	ZBTB39 (ENSEASG00005025709) #19	GPR182 (ENSEASG00005036945) #21	ENSEASG00005034579 #24	ENSEASG00005006331 #22	ENSEASG00005006326 #24	ENSEASG00005006334 #22	ENSEASG00005031913	ENSEASG00005006346 #22	ENSEASG00005006329 #24	ENSEASG00005025949 #22	ENSEASG00005006341	SDR9C7 (ENSEASG00005006337) #23	ENSEASG00005032791 #22	HSD17B6 (ENSEASG00005027419) #24	PRIM1 (ENSEASG00005006308) #25	ENSEASG00005035244 ##26	PTGES3 (ENSEASG00005006299) #27	ATP5F1B (ENSEASG00005006269) #28	ENSEASG00005035823 #29	RBMS2 (ENSEASG00005005834) #30	ENSEASG00005006215 #29	GLS2 (ENSEASG00005005782) #32	SPRYD4 (ENSEASG00005037318) #33	MIP (ENSEASG00005005765) #34	TIMELESS (ENSEASG00005005617) #35
Horse	MODERN SPECIES	27	R3HDM2 (ENSECAG00000003157) #8	STAC3 (ENSECAG00000023923) #9	NDUFA4L2 (ENSECAG00000023525) #10	SHMT2 (ENSECAG00000021295) #11	NXPH4 (ENSECAG00000006133) #12	LRP1 (ENSECAG00000012166) #13	STAT6 (ENSECAG00000008705) #14	NAB2 (ENSECAG00000006453) #15	NEMP1 (ENSECAG00000023977) #16	MYO1A (ENSECAG00000021228) #17	ENSECAG00000035776 #18	ZBTB39 (ENSECAG00000006101) #19	GPR182 (ENSECAG00000049899) #21	ENSECAG00000048525 #22	ENSECAG00000028933 #22	ENSECAG00000038236 #22	SDR9C7 (ENSECAG00000018703) #23	ENSECAG00000029773 #22	ENSECAG00000031430	ENSECAG00000051324	ENSECAG00000036993 #22	ENSECAG00000050633 #25	HSD17B6 (ENSECAG00000016761) #24	ENSECAG00000015297 #25	ENSECAG00000015242 #26	PTGES3 (ENSECAG00000013127) #27	ATP5F1B (ENSECAG00000022627) #28	BAZ2A (ENSECAG00000018243) #29	RBMS2 (ENSECAG00000013470) #30	GLS2 (ENSECAG00000008933) #32	SPRYD4 (ENSECAG00000008889) #33
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000154118.b.wb #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.vb.b #22	ENSGT00940000162028.b #24	ENSGT00940000161764 #23	ENSGT00940000154118.b.vb.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10	ENSGT00950000183092.a #9
Equus	DUPLICATION
Equus	DUPLICATION
Equus	ANCESTRAL SPECIES	43	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.vb.b.a.a #22	ENSGT00940000154118.b.vb.a #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.wb #22	ENSGT00940000162028.b #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36
Horse	MODERN SPECIES	27	INHBC (ENSECAG00000010945)	R3HDM2 (ENSECAG00000003157) #8	STAC3 (ENSECAG00000023923) #9	NDUFA4L2 (ENSECAG00000023525) #10	SHMT2 (ENSECAG00000021295) #11	NXPH4 (ENSECAG00000006133) #12	LRP1 (ENSECAG00000012166) #13	STAT6 (ENSECAG00000008705) #14	NAB2 (ENSECAG00000006453) #15	NEMP1 (ENSECAG00000023977) #16	MYO1A (ENSECAG00000021228) #17	ENSECAG00000035776 #18	ZBTB39 (ENSECAG00000006101) #19	GPR182 (ENSECAG00000049899) #21	ENSECAG00000048525 #22	ENSECAG00000028933 #22	ENSECAG00000038236 #22	SDR9C7 (ENSECAG00000018703) #23	ENSECAG00000029773 #22	ENSECAG00000031430	ENSECAG00000051324	ENSECAG00000036993 #22	ENSECAG00000050633 #25	HSD17B6 (ENSECAG00000016761) #24	ENSECAG00000015297 #25	ENSECAG00000015242 #26	PTGES3 (ENSECAG00000013127) #27	ATP5F1B (ENSECAG00000022627) #28	BAZ2A (ENSECAG00000018243) #29	RBMS2 (ENSECAG00000013470) #30	GLS2 (ENSECAG00000008933) #32
Donkey	MODERN SPECIES	14	STAC3 (ENSEASG00005007072) #9	NDUFA4L2 (ENSEASG00005038366) #10	SHMT2 (ENSEASG00005007060) #11	NXPH4 (ENSEASG00005038262) #12	LRP1 (ENSEASG00005006612) #13	STAT6 (ENSEASG00005006402) #14	NAB2 (ENSEASG00005006368) #15	NEMP1 (ENSEASG00005006360) #16	MYO1A (ENSEASG00005006355) #17	TAC3 (ENSEASG00005006352) #18	ZBTB39 (ENSEASG00005025709) #19	GPR182 (ENSEASG00005036945) #21	ENSEASG00005034579 #24	ENSEASG00005006331 #22	ENSEASG00005006326 #24	ENSEASG00005006334 #22	ENSEASG00005031913	ENSEASG00005006346 #22	ENSEASG00005006329 #24	ENSEASG00005025949 #22	ENSEASG00005006341	SDR9C7 (ENSEASG00005006337) #23	ENSEASG00005032791 #22	HSD17B6 (ENSEASG00005027419) #24	PRIM1 (ENSEASG00005006308) #25	ENSEASG00005035244 ##26	PTGES3 (ENSEASG00005006299) #27	ATP5F1B (ENSEASG00005006269) #28	ENSEASG00005035823 #29	RBMS2 (ENSEASG00005005834) #30	ENSEASG00005006215 #29
Equus	ANCESTRAL SPECIES																	ENSGT00940000154118.b.vb.b.a.b #22
Horse	MODERN SPECIES	27	RBMS2 (ENSECAG00000013470) #30	BAZ2A (ENSECAG00000018243) #29	ATP5F1B (ENSECAG00000022627) #28	PTGES3 (ENSECAG00000013127) #27	ENSECAG00000015242 #26	ENSECAG00000015297 #25	HSD17B6 (ENSECAG00000016761) #24	ENSECAG00000050633 #25	ENSECAG00000036993 #22	ENSECAG00000051324	ENSECAG00000031430	ENSECAG00000029773 #22	SDR9C7 (ENSECAG00000018703) #23	ENSECAG00000038236 #22	ENSECAG00000028933 #22	ENSECAG00000048525 #22	GPR182 (ENSECAG00000049899) #21	ZBTB39 (ENSECAG00000006101) #19	ENSECAG00000035776 #18	MYO1A (ENSECAG00000021228) #17	NEMP1 (ENSECAG00000023977) #16	NAB2 (ENSECAG00000006453) #15	STAT6 (ENSECAG00000008705) #14	LRP1 (ENSECAG00000012166) #13	NXPH4 (ENSECAG00000006133) #12	SHMT2 (ENSECAG00000021295) #11	NDUFA4L2 (ENSECAG00000023525) #10	STAC3 (ENSECAG00000023923) #9	R3HDM2 (ENSECAG00000003157) #8	INHBC (ENSECAG00000010945)	GLI1 (ENSECAG00000011246)
Equus	ANCESTRAL SPECIES																	ENSGT00940000154118.b.vb.b.b #22
Donkey	MODERN SPECIES	14	SHMT2 (ENSEASG00005007060) #11	NXPH4 (ENSEASG00005038262) #12	LRP1 (ENSEASG00005006612) #13	STAT6 (ENSEASG00005006402) #14	NAB2 (ENSEASG00005006368) #15	NEMP1 (ENSEASG00005006360) #16	MYO1A (ENSEASG00005006355) #17	TAC3 (ENSEASG00005006352) #18	ZBTB39 (ENSEASG00005025709) #19	GPR182 (ENSEASG00005036945) #21	ENSEASG00005034579 #24	ENSEASG00005006331 #22	ENSEASG00005006326 #24	ENSEASG00005006334 #22	ENSEASG00005031913	ENSEASG00005006346 #22	ENSEASG00005006329 #24	ENSEASG00005025949 #22	ENSEASG00005006341	SDR9C7 (ENSEASG00005006337) #23	ENSEASG00005032791 #22	HSD17B6 (ENSEASG00005027419) #24	PRIM1 (ENSEASG00005006308) #25	ENSEASG00005035244 ##26	PTGES3 (ENSEASG00005006299) #27	ATP5F1B (ENSEASG00005006269) #28	ENSEASG00005035823 #29	RBMS2 (ENSEASG00005005834) #30	ENSEASG00005006215 #29	GLS2 (ENSEASG00005005782) #32	SPRYD4 (ENSEASG00005037318) #33
Chiroptera	ANCESTRAL SPECIES																	ENSGT00940000154118.b.vb.b #22
Megabat	MODERN SPECIES	168					R3HDM2 (ENSPVAG00000003967) #8	STAC3 (ENSPVAG00000003965) #9	NDUFA4L2 (ENSPVAG00000003964) #10	SHMT2 (ENSPVAG00000003961) #11	NXPH4 (ENSPVAG00000003959) #12	LRP1 (ENSPVAG00000003953) #13	STAT6 (ENSPVAG00000003949) #14	NAB2 (ENSPVAG00000003945) #15	NEMP1 (ENSPVAG00000003943) #16	ENSPVAG00000003933 #17	ENSPVAG00000003930 #18	ENSPVAG00000003924 #22	ENSPVAG00000003921 #23	HSD17B6 (ENSPVAG00000003918) #24
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000161158	ENSGT00390000013978.d	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000154118.b.wb #22	ENSGT00940000162028.a.b #24	ENSGT00940000154118.b.vb.b #22	ENSGT00940000162028.b #24	ENSGT00940000161764 #23	ENSGT00940000154118.b.vb.a #22	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11
Equus	ANCESTRAL SPECIES	43	ENSGT00390000013978.d	ENSGT00390000006482	ENSGT01050000244905.C #37	ENSGT00500000045104.g #36	ENSGT00390000015124 #35	ENSGT00940000156260 #34	ENSGT00940000159780 #33	ENSGT00390000010463.a.a.a #32	ENSGT00940000155250 #30	ENSGT00940000159490 #29	ENSGT00550000074800 #28	ENSGT00940000154256 #27	ENSGT00440000033468.c.a #26	ENSGT00390000011466 #25	ENSGT00940000162028.b #24	ENSGT00940000154118.b.wb #22	ENSGT00940000161764 #23	ENSGT00940000154118.b.vb.a #22	ENSGT00940000154118.b.vb.b.a.a #22	ENSGT00940000162028.a.b #24	ENSGT00940000154307.D #21	ENSGT00940000160722 #19	ENSGT00390000000335 #18	ENSGT00940000160660 #17	ENSGT00390000002174.a #16	ENSGT00390000006330.a.b #15	ENSGT01080000257420.C.b.a #14	ENSGT00940000157899.b #13	ENSGT00950000182883.b.a.b #12	ENSGT00390000002762.a.a #11	ENSGT00940000161040 #10
Horse	DUPLICATION
Horse	MODERN SPECIES	27	PAN2 (ENSECAG00000019814)	IL23A (ENSECAG00000022310)	STAT2 (ENSECAG00000022326) #37	TIMELESS (ENSECAG00000002892) #35	MIP (ENSECAG00000008856) #34	SPRYD4 (ENSECAG00000008889) #33	GLS2 (ENSECAG00000008933) #32	RBMS2 (ENSECAG00000013470) #30	BAZ2A (ENSECAG00000018243) #29	ATP5F1B (ENSECAG00000022627) #28	PTGES3 (ENSECAG00000013127) #27	ENSECAG00000015242 #26	ENSECAG00000015297 #25	HSD17B6 (ENSECAG00000016761) #24	ENSECAG00000050633 #25	ENSECAG00000036993 #22	ENSECAG00000051324	ENSECAG00000031430	ENSECAG00000029773 #22	SDR9C7 (ENSECAG00000018703) #23	ENSECAG00000038236 #22	ENSECAG00000028933 #22	ENSECAG00000048525 #22	GPR182 (ENSECAG00000049899) #21	ZBTB39 (ENSECAG00000006101) #19	ENSECAG00000035776 #18	MYO1A (ENSECAG00000021228) #17	NEMP1 (ENSECAG00000023977) #16	NAB2 (ENSECAG00000006453) #15	STAT6 (ENSECAG00000008705) #14	LRP1 (ENSECAG00000012166) #13
Horse	MODERN SPECIES	27	TIMELESS (ENSECAG00000002892) #35	MIP (ENSECAG00000008856) #34	SPRYD4 (ENSECAG00000008889) #33	GLS2 (ENSECAG00000008933) #32	RBMS2 (ENSECAG00000013470) #30	BAZ2A (ENSECAG00000018243) #29	ATP5F1B (ENSECAG00000022627) #28	PTGES3 (ENSECAG00000013127) #27	ENSECAG00000015242 #26	ENSECAG00000015297 #25	HSD17B6 (ENSECAG00000016761) #24	ENSECAG00000050633 #25	ENSECAG00000036993 #22	ENSECAG00000051324	ENSECAG00000031430	ENSECAG00000029773 #22	SDR9C7 (ENSECAG00000018703) #23	ENSECAG00000038236 #22	ENSECAG00000028933 #22	ENSECAG00000048525 #22	GPR182 (ENSECAG00000049899) #21	ZBTB39 (ENSECAG00000006101) #19	ENSECAG00000035776 #18	MYO1A (ENSECAG00000021228) #17	NEMP1 (ENSECAG00000023977) #16	NAB2 (ENSECAG00000006453) #15	STAT6 (ENSECAG00000008705) #14	LRP1 (ENSECAG00000012166) #13	NXPH4 (ENSECAG00000006133) #12	SHMT2 (ENSECAG00000021295) #11	NDUFA4L2 (ENSECAG00000023525) #10
Donkey	DUPLICATION
Donkey	MODERN SPECIES	14	IL23A (ENSEASG00005035882)	STAT2 (ENSEASG00005005423) #37	APOF (ENSEASG00005026252) #36	TIMELESS (ENSEASG00005005617) #35	MIP (ENSEASG00005005765) #34	SPRYD4 (ENSEASG00005037318) #33	GLS2 (ENSEASG00005005782) #32	ENSEASG00005006215 #29	RBMS2 (ENSEASG00005005834) #30	ENSEASG00005035823 #29	ATP5F1B (ENSEASG00005006269) #28	PTGES3 (ENSEASG00005006299) #27	ENSEASG00005035244 ##26	PRIM1 (ENSEASG00005006308) #25	HSD17B6 (ENSEASG00005027419) #24	ENSEASG00005032791 #22	SDR9C7 (ENSEASG00005006337) #23	ENSEASG00005006341	ENSEASG00005025949 #22	ENSEASG00005006329 #24	ENSEASG00005006346 #22	ENSEASG00005031913	ENSEASG00005006334 #22	ENSEASG00005006326 #24	ENSEASG00005006331 #22	ENSEASG00005034579 #24	GPR182 (ENSEASG00005036945) #21	ZBTB39 (ENSEASG00005025709) #19	TAC3 (ENSEASG00005006352) #18	MYO1A (ENSEASG00005006355) #17	NEMP1 (ENSEASG00005006360) #16
Donkey	MODERN SPECIES	14	INHBC (ENSEASG00005032719)	R3HDM2 (ENSEASG00005007091) #8	STAC3 (ENSEASG00005007072) #9	NDUFA4L2 (ENSEASG00005038366) #10	SHMT2 (ENSEASG00005007060) #11	NXPH4 (ENSEASG00005038262) #12	LRP1 (ENSEASG00005006612) #13	STAT6 (ENSEASG00005006402) #14	NAB2 (ENSEASG00005006368) #15	NEMP1 (ENSEASG00005006360) #16	MYO1A (ENSEASG00005006355) #17	TAC3 (ENSEASG00005006352) #18	ZBTB39 (ENSEASG00005025709) #19	GPR182 (ENSEASG00005036945) #21	ENSEASG00005034579 #24	ENSEASG00005006331 #22	ENSEASG00005006326 #24	ENSEASG00005006334 #22	ENSEASG00005031913	ENSEASG00005006346 #22	ENSEASG00005006329 #24	ENSEASG00005025949 #22	ENSEASG00005006341	SDR9C7 (ENSEASG00005006337) #23	ENSEASG00005032791 #22	HSD17B6 (ENSEASG00005027419) #24	PRIM1 (ENSEASG00005006308) #25	ENSEASG00005035244 ##26	PTGES3 (ENSEASG00005006299) #27	ATP5F1B (ENSEASG00005006269) #28	ENSEASG00005035823 #29
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000154118.b #22
Sloth	MODERN SPECIES	11911																RDH16 (ENSCHOG00000010227) #22
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104.g #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Elephant	MODERN SPECIES	196	INHBE (ENSLAFG00000007955)	INHBC (ENSLAFG00000007954)	R3HDM2 (ENSLAFG00000006510) #8	STAC3 (ENSLAFG00000006507) #9	NDUFA4L2 (ENSLAFG00000021950) #10	SHMT2 (ENSLAFG00000011532) #11	NXPH4 (ENSLAFG00000011528) #12	LRP1 (ENSLAFG00000005976) #13	STAT6 (ENSLAFG00000005970) #14	NAB2 (ENSLAFG00000032283) #15	NEMP1 (ENSLAFG00000017999) #16	MYO1A (ENSLAFG00000017988) #17	ENSLAFG00000017982 #18	ZBTB39 (ENSLAFG00000004913) #19	GPR182 (ENSLAFG00000004909) #21	RDH16 (ENSLAFG00000017862) #22	SDR9C7 (ENSLAFG00000017871) #23	HSD17B6 (ENSLAFG00000012770) #24	PRIM1 (ENSLAFG00000004602) #25	ENSLAFG00000004598 #26	PTGES3 (ENSLAFG00000008268) #27	ATP5F1B (ENSLAFG00000028428) #28	BAZ2A (ENSLAFG00000008255) #29	RBMS2 (ENSLAFG00000008251) #30	GLS2 (ENSLAFG00000002237) #32	SPRYD4 (ENSLAFG00000002235) #33	MIP (ENSLAFG00000032685) #34	TIMELESS (ENSLAFG00000004742) #35	ENSLAFG00000026784 #36	STAT2 (ENSLAFG00000014890) #37	IL23A (ENSLAFG00000014886)
Hyrax	MODERN SPECIES	2942																ENSPCAG00000012350 #22
Tenrec	MODERN SPECIES	3588																RDH16 (ENSETEG00000013775) #22
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000161764 #23	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104 #36	ENSGT01050000244905.C #37	ENSGT00390000006482	ENSGT00390000013978.d
Opossum	MODERN SPECIES	390										STAT6 (ENSMODG00000019411) #14	NAB2 (ENSMODG00000019410) #15	NEMP1 (ENSMODG00000049418) #16	MYO1A (ENSMODG00000019400) #17	TAC3 (ENSMODG00000019398) #18	GPR182 (ENSMODG00000022760) #21	RDH16 (ENSMODG00000019396) #22
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104 #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	4	GLI1 (ENSSHAG00000006652)	INHBE (ENSSHAG00000006556)	INHBC (ENSSHAG00000006461)	R3HDM2 (ENSSHAG00000003511) #8	STAC3 (ENSSHAG00000021481) #9	NDUFA4L2 (ENSSHAG00000029208) #10	SHMT2 (ENSSHAG00000002708) #11	LRP1 (ENSSHAG00000007379) #13	STAT6 (ENSSHAG00000006372) #14	NAB2 (ENSSHAG00000006277) #15	NEMP1 (ENSSHAG00000005742) #16	MYO1A (ENSSHAG00000005404) #17	TAC3 (ENSSHAG00000005021) #18	ZBTB39 (ENSSHAG00000025188) #19	GPR182 (ENSSHAG00000026071) #21	RDH16 (ENSSHAG00000031840) #22	SDR9C7 (ENSSHAG00000020616) #23	ENSSHAG00000001470 #22	HSD17B6 (ENSSHAG00000003202) #24	PRIM1 (ENSSHAG00000003174) #25	ENSSHAG00000025553 #26	ENSSHAG00000031892 #27	ATP5F1B (ENSSHAG00000002661) #28	BAZ2A (ENSSHAG00000000118) #29	RBMS2 (ENSSHAG00000020932) #30	GLS2 (ENSSHAG00000003536) #32	SPRYD4 (ENSSHAG00000029425) #33	MIP (ENSSHAG00000002486) #34	TIMELESS (ENSSHAG00000000431) #35	STAT2 (ENSSHAG00000000508) #37	IL23A (ENSSHAG00000025056)
Tasmanian devil	MODERN SPECIES	4	INHBC (ENSSHAG00000006461)	R3HDM2 (ENSSHAG00000003511) #8	STAC3 (ENSSHAG00000021481) #9	NDUFA4L2 (ENSSHAG00000029208) #10	SHMT2 (ENSSHAG00000002708) #11	LRP1 (ENSSHAG00000007379) #13	STAT6 (ENSSHAG00000006372) #14	NAB2 (ENSSHAG00000006277) #15	NEMP1 (ENSSHAG00000005742) #16	MYO1A (ENSSHAG00000005404) #17	TAC3 (ENSSHAG00000005021) #18	ZBTB39 (ENSSHAG00000025188) #19	GPR182 (ENSSHAG00000026071) #21	RDH16 (ENSSHAG00000031840) #22	SDR9C7 (ENSSHAG00000020616) #23	ENSSHAG00000001470 #22	HSD17B6 (ENSSHAG00000003202) #24	PRIM1 (ENSSHAG00000003174) #25	ENSSHAG00000025553 #26	ENSSHAG00000031892 #27	ATP5F1B (ENSSHAG00000002661) #28	BAZ2A (ENSSHAG00000000118) #29	RBMS2 (ENSSHAG00000020932) #30	GLS2 (ENSSHAG00000003536) #32	SPRYD4 (ENSSHAG00000029425) #33	MIP (ENSSHAG00000002486) #34	TIMELESS (ENSSHAG00000000431) #35	STAT2 (ENSSHAG00000000508) #37	IL23A (ENSSHAG00000025056)	PAN2 (ENSSHAG00000000122)	CS (ENSSHAG00000000672)
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104 #36	ENSGT01050000244905.C #37	ENSGT00390000006482
Wallaby	DUPLICATION
Wallaby	MODERN SPECIES	14909																RDH16 (ENSMEUG00000003214) #22
Wallaby	MODERN SPECIES	12998																ENSMEUG00000012232 #22
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000162107	ENSGT00940000160065	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #21	ENSGT00940000154118.b #22	ENSGT00940000161764 #23	ENSGT00940000162028 #24	ENSGT00390000011466 #25	ENSGT00440000033468.c.a #26	ENSGT00940000154256 #27	ENSGT00550000074800 #28	ENSGT00940000159490 #29	ENSGT00940000155250 #30	ENSGT00940000174110	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35	ENSGT00500000045104 #36	ENSGT01050000244905.C #37
koala	MODERN SPECIES	37	INHBE (ENSPCIG00000036293)	INHBC (ENSPCIG00000023792)	R3HDM2 (ENSPCIG00000023841) #8	STAC3 (ENSPCIG00000024384) #9	NDUFA4L2 (ENSPCIG00000032569) #10	SHMT2 (ENSPCIG00000024398) #11	NXPH4 (ENSPCIG00000035483) #12	LRP1 (ENSPCIG00000024483) #13	STAT6 (ENSPCIG00000024615) #14	NAB2 (ENSPCIG00000024618) #15	NEMP1 (ENSPCIG00000024619) #16	MYO1A (ENSPCIG00000024623) #17	TAC3 (ENSPCIG00000024626) #18	ZBTB39 (ENSPCIG00000031658) #19	GPR182 (ENSPCIG00000024628) #21	RDH16 (ENSPCIG00000024627) #22	SDR9C7 (ENSPCIG00000024629) #23	HSD17B6 (ENSPCIG00000031287) #24	PRIM1 (ENSPCIG00000024632) #25	ENSPCIG00000024633 #26	ENSPCIG00000031059 #27	ATP5F1B (ENSPCIG00000018036) #28	BAZ2A (ENSPCIG00000018044) #29	RBMS2 (ENSPCIG00000018048) #30	ENSPCIG00000018051	ENSPCIG00000024634	GLS2 (ENSPCIG00000024635) #32	SPRYD4 (ENSPCIG00000024636) #33	MIP (ENSPCIG00000024637) #34	TIMELESS (ENSPCIG00000024638) #35	ENSPCIG00000037057 #36
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	682	INHBE (ENSVURG00010023172)	INHBC (ENSVURG00010023176)	R3HDM2 (ENSVURG00010023179) #8	STAC3 (ENSVURG00010023194) #9	ENSVURG00010023200 #10	SHMT2 (ENSVURG00010023203) #11	NXPH4 (ENSVURG00010023207) #12	LRP1 (ENSVURG00010023315) #13	STAT6 (ENSVURG00010023612) #14	NAB2 (ENSVURG00010023614) #15	NEMP1 (ENSVURG00010023617) #16	MYO1A (ENSVURG00010023618) #17	TAC3 (ENSVURG00010023622) #18	ZBTB39 (ENSVURG00010023623) #19	GPR182 (ENSVURG00010023624) #21	RDH16 (ENSVURG00010023625) #22	SDR9C7 (ENSVURG00010023627) #23	ENSVURG00010023630 #22	ENSVURG00010023633 #26	PTGES3 (ENSVURG00010023636) #27	ATP5F1B (ENSVURG00010023640) #28	BAZ2A (ENSVURG00010023645) #29	RBMS2 (ENSVURG00010023648) #30	ENSVURG00010023651	GLS2 (ENSVURG00010023652) #32	SPRYD4 (ENSVURG00010023655) #33	MIP (ENSVURG00010023657) #34	TIMELESS (ENSVURG00010023659) #35	ENSVURG00010023661 #36	STAT2 (ENSVURG00010023662) #37	IL23A (ENSVURG00010023664)
Common wonbat	MODERN SPECIES	682	R3HDM2 (ENSVURG00010023179) #8	STAC3 (ENSVURG00010023194) #9	ENSVURG00010023200 #10	SHMT2 (ENSVURG00010023203) #11	NXPH4 (ENSVURG00010023207) #12	LRP1 (ENSVURG00010023315) #13	STAT6 (ENSVURG00010023612) #14	NAB2 (ENSVURG00010023614) #15	NEMP1 (ENSVURG00010023617) #16	MYO1A (ENSVURG00010023618) #17	TAC3 (ENSVURG00010023622) #18	ZBTB39 (ENSVURG00010023623) #19	GPR182 (ENSVURG00010023624) #21	RDH16 (ENSVURG00010023625) #22	SDR9C7 (ENSVURG00010023627) #23	ENSVURG00010023630 #22	ENSVURG00010023633 #26	PTGES3 (ENSVURG00010023636) #27	ATP5F1B (ENSVURG00010023640) #28	BAZ2A (ENSVURG00010023645) #29	RBMS2 (ENSVURG00010023648) #30	ENSVURG00010023651	GLS2 (ENSVURG00010023652) #32	SPRYD4 (ENSVURG00010023655) #33	MIP (ENSVURG00010023657) #34	TIMELESS (ENSVURG00010023659) #35	ENSVURG00010023661 #36	STAT2 (ENSVURG00010023662) #37	IL23A (ENSVURG00010023664)	PAN2 (ENSVURG00010023667)	ENSVURG00010023683
Platypus	DUPLICATION
Platypus	MODERN SPECIES	1	ENSOANG00000046641	MARS1 (ENSOANG00000013318)	ARHGAP9 (ENSOANG00000030220)	INHBE (ENSOANG00000043557)	ENSOANG00000039683	STAC3 (ENSOANG00000038086) #9	NDUFA4L2 (ENSOANG00000044477) #10	SHMT2 (ENSOANG00000047243) #11	ENSOANG00000051029	ENSOANG00000040423 ##13	STAT6 (ENSOANG00000049497) #14	NAB2 (ENSOANG00000048993) #15	NEMP1 (ENSOANG00000040767) #16	MYO1A (ENSOANG00000044794) #17	GPR182 (ENSOANG00000044878) #21	ENSOANG00000043202 #22	SDR9C7 (ENSOANG00000007123) #23	ENSOANG00000008411 #22	PRIM1 (ENSOANG00000008121) #25	ENSOANG00000050977 ##26	PTGES3 (ENSOANG00000010129) #27	ATP5F1B (ENSOANG00000003235) #28	BAZ2A (ENSOANG00000004476) #29	RBMS2 (ENSOANG00000004477) #30	GLS2 (ENSOANG00000043788) #32	SPRYD4 (ENSOANG00000014627) #33	MIP (ENSOANG00000011653) #34	TIMELESS (ENSOANG00000012531) #35	ENSOANG00000012739 #37	IL23A (ENSOANG00000012738)	PAN2 (ENSOANG00000005151)
Platypus	MODERN SPECIES	1	ARHGAP9 (ENSOANG00000030220)	INHBE (ENSOANG00000043557)	ENSOANG00000039683	STAC3 (ENSOANG00000038086) #9	NDUFA4L2 (ENSOANG00000044477) #10	SHMT2 (ENSOANG00000047243) #11	ENSOANG00000051029	ENSOANG00000040423 ##13	STAT6 (ENSOANG00000049497) #14	NAB2 (ENSOANG00000048993) #15	NEMP1 (ENSOANG00000040767) #16	MYO1A (ENSOANG00000044794) #17	GPR182 (ENSOANG00000044878) #21	ENSOANG00000043202 #22	SDR9C7 (ENSOANG00000007123) #23	ENSOANG00000008411 #22	PRIM1 (ENSOANG00000008121) #25	ENSOANG00000050977 ##26	PTGES3 (ENSOANG00000010129) #27	ATP5F1B (ENSOANG00000003235) #28	BAZ2A (ENSOANG00000004476) #29	RBMS2 (ENSOANG00000004477) #30	GLS2 (ENSOANG00000043788) #32	SPRYD4 (ENSOANG00000014627) #33	MIP (ENSOANG00000011653) #34	TIMELESS (ENSOANG00000012531) #35	ENSOANG00000012739 #37	IL23A (ENSOANG00000012738)	PAN2 (ENSOANG00000005151)	CNPY2 (ENSOANG00000036646)	CS (ENSOANG00000031970)