Rodentia ANCESTRAL SPECIES 10 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.a.b ##28 ENSGT00940000165111 ENSGT00940000166157 ENSGT00940000162988 #29 ENSGT00950000182925.D.a.b.a.b ##28 ENSGT00940000154103.b Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.a.b ##28 ENSGT00940000162988 #29 ENSGT00950000182925.D.a.b.a.b ##28 ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000161236.a.a ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.b #28 ENSGT00940000162502 ENSGT00940000162988 #29 ENSGT00950000182925.D.a.b.a.b ##28 ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b ENSGT00940000153664.A.b.a ENSGT00390000018389 ENSGT00940000159316 Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT00940000161236.a.a ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.b #28 ENSGT00940000162502 ENSGT00940000162988 #29 ENSGT00950000182925.D.a.b.a.b ##28 ENSGT00940000154103.b ENSGT00940000153902.b ENSGT00530000063529.B ENSGT00940000153664.A.b.a ENSGT00390000018389 ENSGT00940000159316 Guinea pig MODERN SPECIES 170 ENSCPOG00000001051 #19 ENSCPOG00000022846 #20 PFKFB1 (ENSCPOG00000007261) #21 APEX2 (ENSCPOG00000007265) #22 ALAS2 (ENSCPOG00000007268) #23 RRAGB (ENSCPOG00000011266) #24 KLF8 (ENSCPOG00000010165) #25 UBQLN2 (ENSCPOG00000013496) #26 NBDY (ENSCPOG00000038469) #27 ENSCPOG00000037454 #28 ENSCPOG00000005007 #29 Hystricomorpha_b ANCESTRAL SPECIES 74 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00540000070023.c.a.a ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.b #28 ENSGT00940000162502 ENSGT00940000162988 #29 ENSGT00950000182925.D.a.b.a.b ##28 ENSGT00940000154103.b ENSGT00940000153902.b ENSGT00530000063529.B ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 Long-tailed chinchilla MODERN SPECIES 182 RIBC1 (ENSCLAG00000005268) HSD17B10 (ENSCLAG00000006462) HUWE1 (ENSCLAG00000006361) ENSCLAG00000006563 PHF8 (ENSCLAG00000007973) FAM120C (ENSCLAG00000004701) ENSCLAG00000017687 WNK3 (ENSCLAG00000008201) ENSCLAG00000007014 TSR2 (ENSCLAG00000007235) FGD1 (ENSCLAG00000002961) GNL3L (ENSCLAG00000003823) MAGED2 (ENSCLAG00000007195) #19 ENSCLAG00000007306 #20 PFKFB1 (ENSCLAG00000009234) #21 APEX2 (ENSCLAG00000017315) #22 ALAS2 (ENSCLAG00000003042) #23 RRAGB (ENSCLAG00000003913) #24 KLF8 (ENSCLAG00000005236) #25 UBQLN2 (ENSCLAG00000017708) #26 NBDY (ENSCLAG00000017820) #27 ENSCLAG00000003312 ENSCLAG00000003441 #28 FAAH2 (ENSCLAG00000003768) SPIN4 (ENSCLAG00000017570) ##28 ARHGEF9 (ENSCLAG00000004407) ASB12 (ENSCLAG00000006178) AMER1 (ENSCLAG00000017657) ENSCLAG00000007927 ZC4H2 (ENSCLAG00000002934) ZC3H12B (ENSCLAG00000003600) Degu MODERN SPECIES 398 ENSODEG00000000070 #20 ENSODEG00000003143 PFKFB1 (ENSODEG00000003122) #21 ENSODEG00000003095 #22 ENSODEG00000018880 ALAS2 (ENSODEG00000003044) #23 ENSODEG00000003024 ENSODEG00000003009 RRAGB (ENSODEG00000002951) #24 ENSODEG00000002914 #25 ENSODEG00000002898 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000003448 ENSHGLG00000020403 ENSHGLG00000001475 ENSHGLG00000001525 ENSHGLG00000001827 ENSHGLG00000002712 ENSHGLG00000050769 ENSHGLG00000016776 ENSHGLG00000035449 FGD1 (ENSHGLG00000002606) GNL3L (ENSHGLG00000001778) ENSHGLG00000035750 ENSHGLG00000000204 #19 Tro (ENSHGLG00000000236) #20 Pfkfb1 (ENSHGLG00000000258) #21 APEX2 (ENSHGLG00000042453) #22 ENSHGLG00000000297 ALAS2 (ENSHGLG00000000286) #23 RRAGB (ENSHGLG00000000313) #24 ENSHGLG00000040831 ENSHGLG00000000922 #25 ENSHGLG00000037038 UBQLN2 (ENSHGLG00000020145) #26 ENSHGLG00000000962 NBDY (ENSHGLG00000049275) #27 ENSHGLG00000050802 #28 ENSHGLG00000000991 #28 ENSHGLG00000001021 ENSHGLG00000045579 SPIN4 (ENSHGLG00000034676) ##28 ARHGEF9 (ENSHGLG00000002050) Sciuridae ANCESTRAL SPECIES 28 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00390000001055 ENSGT00510000049526 ENSGT00840000130063.e ENSGT00940000163664 ENSGT00840000130063.f ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.a.b ##28 ENSGT00940000163246 ENSGT00940000162502 Marmotini ANCESTRAL SPECIES 105 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 Marmotini_b ANCESTRAL SPECIES 194 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 Arctic ground squirrel MODERN SPECIES 360 IQSEC2 (ENSUPAG00010000324) SMC1A (ENSUPAG00010000638) RIBC1 (ENSUPAG00010000700) HSD17B10 (ENSUPAG00010000717) HUWE1 (ENSUPAG00010000765) PHF8 (ENSUPAG00010001412) FAM120C (ENSUPAG00010001651) WNK3 (ENSUPAG00010001662) TSR2 (ENSUPAG00010001725) FGD1 (ENSUPAG00010001738) GNL3L (ENSUPAG00010001765) ITIH6 (ENSUPAG00010001804) MAGED2 (ENSUPAG00010001842) #19 TRO (ENSUPAG00010001905) #20 PFKFB1 (ENSUPAG00010001964) #21 APEX2 (ENSUPAG00010002030) #22 ALAS2 (ENSUPAG00010002077) #23 FAM104B (ENSUPAG00010002111) ENSUPAG00010002151 Squirrel MODERN SPECIES 351 IQSEC2 (ENSSTOG00000001231) SMC1A (ENSSTOG00000005481) RIBC1 (ENSSTOG00000005524) HSD17B10 (ENSSTOG00000005535) HUWE1 (ENSSTOG00000005546) PHF8 (ENSSTOG00000000290) FAM120C (ENSSTOG00000000293) WNK3 (ENSSTOG00000000299) TSR2 (ENSSTOG00000033612) FGD1 (ENSSTOG00000027673) GNL3L (ENSSTOG00000023157) ITIH6 (ENSSTOG00000026991) MAGED2 (ENSSTOG00000006621) #19 ENSSTOG00000020140 #20 PFKFB1 (ENSSTOG00000016108) #21 APEX2 (ENSSTOG00000025121) #22 ALAS2 (ENSSTOG00000008000) #23 ENSSTOG00000019959 Alpin marmot MODERN SPECIES 121 IQSEC2 (ENSMMMG00000012831) SMC1A (ENSMMMG00000012856) RIBC1 (ENSMMMG00000012889) HSD17B10 (ENSMMMG00000012895) HUWE1 (ENSMMMG00000012907) PHF8 (ENSMMMG00000013095) FAM120C (ENSMMMG00000013313) WNK3 (ENSMMMG00000013351) TSR2 (ENSMMMG00000013450) FGD1 (ENSMMMG00000013467) GNL3L (ENSMMMG00000013506) ITIH6 (ENSMMMG00000013549) MAGED2 (ENSMMMG00000013585) #19 ENSMMMG00000013632 #20 PFKFB1 (ENSMMMG00000013675) #21 APEX2 (ENSMMMG00000013719) #22 ALAS2 (ENSMMMG00000013791) #23 Eurasian red squirrel MODERN SPECIES 156 HUWE1 (ENSSVLG00005013657) PHF8 (ENSSVLG00005013001) FAM120C (ENSSVLG00005012884) ENSSVLG00005012811 WNK3 (ENSSVLG00005012128) ENSSVLG00005012050 FGD1 (ENSSVLG00005011952) GNL3L (ENSSVLG00005011899) ENSSVLG00005011877 ENSSVLG00005011838 ENSSVLG00005011811 ITIH6 (ENSSVLG00005011628) ENSSVLG00005011487 #19 ENSSVLG00005011142 #20 PFKFB1 (ENSSVLG00005010833) #21 APEX2 (ENSSVLG00005010743) #22 ALAS2 (ENSSVLG00005010575) #23 ENSSVLG00005010526 ENSSVLG00005010499 ENSSVLG00005010473 ENSSVLG00005010447 ENSSVLG00005010343 ENSSVLG00005022919 USP51 (ENSSVLG00005022912) ENSSVLG00005022899 FOXR2 (ENSSVLG00005022885) RRAGB (ENSSVLG00005022820) #24 ENSSVLG00005022786 KLF8 (ENSSVLG00005022667) #25 UBQLN2 (ENSSVLG00005022640) #26 ENSSVLG00005022614 Rodentia_B ANCESTRAL SPECIES 49 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.a.b ##28 Kangaroo rat MODERN SPECIES 537 Phf8 (ENSDORG00000001466) Fam120c (ENSDORG00000011866) Wnk3 (ENSDORG00000028900) Tsr2 (ENSDORG00000025574) Fgd1 (ENSDORG00000007439) Gnl3l (ENSDORG00000029665) Maged2 (ENSDORG00000001036) #19 ENSDORG00000026263 #20 Pfkfb1 (ENSDORG00000006251) #21 ENSDORG00000024412 #22 Alas2 (ENSDORG00000015012) #23 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847 ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.a.b ##28 ENSGT00940000160559 ENSGT00940000160940 ENSGT00940000159479 ENSGT00940000162262 ENSGT00940000160459 Muroidea ANCESTRAL SPECIES 30 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00950000182925.D.a.b.a.a.a.b ##28 ENSGT00940000160559 ENSGT00940000160940 ENSGT00940000159479 ENSGT00940000162262 ENSGT00940000160459 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00940000167111 ENSGT00950000182925.D.a.b.a.a.a.b.a.a ##28 ENSGT00940000160559 ENSGT00940000160940 ENSGT00940000159479 ENSGT00940000162262 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00940000167111 ENSGT00950000182925.D.a.b.a.a.a.b.a.a ##28 ENSGT00940000160559 ENSGT00940000160940 ENSGT00940000159479 ENSGT00940000162262 Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000164196 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00940000167111 ENSGT00950000182925.D.a.b.a.a.a.b.a.a ##28 ENSGT00950000182925.D.a.b.a.a.a.b.a.b.a ##28 ENSGT00940000160559 ENSGT00940000160940 ENSGT00940000159479 Chinese hamster chok1gshd MODERN SPECIES 175 Kdm5c (ENSCGRG00001018652) Iqsec2 (ENSCGRG00001013421) Smc1a (ENSCGRG00001012840) Ribc1 (ENSCGRG00001016624) Hsd17b10 (ENSCGRG00001019853) Huwe1 (ENSCGRG00001016279) Phf8 (ENSCGRG00001020020) Fam120c (ENSCGRG00001015138) Wnk3 (ENSCGRG00001023390) Tsr2 (ENSCGRG00001023321) Fgd1 (ENSCGRG00001005494) Gnl3l (ENSCGRG00001017459) Maged2 (ENSCGRG00001011051) #19 Tro (ENSCGRG00001020754) #20 Pfkfb1 (ENSCGRG00001018740) #21 Apex2 (ENSCGRG00001008132) #22 Alas2 (ENSCGRG00001014696) #23 ENSCGRG00001021296 Tmem29 (ENSCGRG00001006192) ENSCGRG00001013308 ENSCGRG00001021001 ENSCGRG00001009910 Usp51 (ENSCGRG00001009830) Mageh1 (ENSCGRG00001009846) Foxr2 (ENSCGRG00001009252) Rragb (ENSCGRG00001013394) #24 Klf8 (ENSCGRG00001019035) #25 Ubqln2 (ENSCGRG00001016085) #26 Kctd12b (ENSCGRG00001004538) Nbdy (ENSCGRG00001003251) #27 ENSCGRG00001005909 Golden Hamster MODERN SPECIES 84 ENSMAUG00000016924 #22 Cricetidae_B ANCESTRAL SPECIES 36 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00940000167111 ENSGT00950000182925.D.a.b.a.a.a.b.a.a ##28 Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000006148 Huwe1 (ENSPEMG00000007064) Phf8 (ENSPEMG00000018201) Fam120c (ENSPEMG00000012802) Wnk3 (ENSPEMG00000014760) ENSPEMG00000025064 Tsr2 (ENSPEMG00000015713) Fgd1 (ENSPEMG00000017278) ENSPEMG00000008376 Gnl3l (ENSPEMG00000012235) ENSPEMG00000027867 Maged2 (ENSPEMG00000015948) #19 ENSPEMG00000018106 #20 ENSPEMG00000026930 Pfkfb1 (ENSPEMG00000007169) #21 Apex2 (ENSPEMG00000016475) #22 Alas2 (ENSPEMG00000009715) #23 ENSPEMG00000024499 ENSPEMG00000028269 ENSPEMG00000029137 ENSPEMG00000005508 Spin2c (ENSPEMG00000023511) ##28 ENSPEMG00000022981 Nbdy (ENSPEMG00000001256) #27 Kctd12b (ENSPEMG00000027348) Ubqln2 (ENSPEMG00000023547) #26 Klf8 (ENSPEMG00000011483) #25 Rragb (ENSPEMG00000014621) #24 Foxr2 (ENSPEMG00000025527) ENSPEMG00000026118 Mageh1 (ENSPEMG00000003236) Prairie vole MODERN SPECIES 360 Kdm5c (ENSMOCG00000012222) Iqsec2 (ENSMOCG00000014030) Smc1a (ENSMOCG00000016110) Ribc1 (ENSMOCG00000014134) ENSMOCG00000000414 Huwe1 (ENSMOCG00000009594) Phf8 (ENSMOCG00000014989) Fam120c (ENSMOCG00000019667) Wnk3 (ENSMOCG00000005941) Tsr2 (ENSMOCG00000006662) Fgd1 (ENSMOCG00000006370) Gnl3l (ENSMOCG00000021622) Maged2 (ENSMOCG00000013159) #19 ENSMOCG00000017394 #20 Pfkfb1 (ENSMOCG00000017052) #21 Apex2 (ENSMOCG00000004339) #22 Alas2 (ENSMOCG00000021931) #23 ENSMOCG00000021282 Tmem29 (ENSMOCG00000020676) ENSMOCG00000010679 Mageh1 (ENSMOCG00000010509) Rragb (ENSMOCG00000010568) #24 ENSMOCG00000013664 ENSMOCG00000002121 Klf8 (ENSMOCG00000000163) #25 Kctd12b (ENSMOCG00000015728) ENSMOCG00000003551 Spin2c (ENSMOCG00000001348) ##28 ENSMOCG00000013763 ##28 ENSMOCG00000021049 ENSMOCG00000012729 Murinae ANCESTRAL SPECIES 32 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000162993 ENSGT00950000183031.B.e.a #24 ENSGT00940000161062 #25 ENSGT00940000162603 #26 ENSGT00940000163673 ENSGT00390000004891 #27 ENSGT00940000167111 ENSGT00950000182925.D.a.b.a.a.a.b.a.a ##28 Mus ANCESTRAL SPECIES 9 ENSGT00940000161236.a.a ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00510000049526 ENSGT00940000160039 ENSGT00940000159971 ENSGT01050000244937.a.b.a ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00940000159922.b ENSGT00950000183232 ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b Mus_A ANCESTRAL SPECIES 15 ENSGT00940000161236.a.a ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b.g ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00510000049526 ENSGT00940000160039 ENSGT00940000159971 ENSGT01050000244937.a.b.a ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00940000159922.b ENSGT00950000183232 ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b Mus_B ANCESTRAL SPECIES 14 ENSGT00940000161236.a.a ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b.g ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00510000049526 ENSGT00940000160039 ENSGT00940000159971 ENSGT01050000244937.a.b.a ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00940000159922.b ENSGT00950000183232 ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b Mouse MODERN SPECIES 37 Iqsec2 (ENSMUSG00000041115) Smc1a (ENSMUSG00000041133) Ribc1 (ENSMUSG00000025257) Hsd17b10 (ENSMUSG00000025260) Huwe1 (ENSMUSG00000025261) Phf8 (ENSMUSG00000041229) Fam120c (ENSMUSG00000025262) Wnk3 (ENSMUSG00000041245) Tsr2 (ENSMUSG00000025264) Fgd1 (ENSMUSG00000025265) Gnl3l (ENSMUSG00000025266) Maged2 (ENSMUSG00000025268) #19 Tro (ENSMUSG00000025272) #20 Pfkfb1 (ENSMUSG00000025271) #21 Alas2 (ENSMUSG00000025270) #23 Apex2 (ENSMUSG00000025269) #22 Tmem29 (ENSMUSG00000041353) Gm15091 (ENSMUSG00000095082) Gm15097 (ENSMUSG00000094378) Gm10439 (ENSMUSG00000072923) Gm15085 (ENSMUSG00000095621) Gm15093 (ENSMUSG00000094941) Ott (ENSMUSG00000094885) Luzp4 (ENSMUSG00000079387) Gm15127 (ENSMUSG00000096834) Gm15114 (ENSMUSG00000079395) Gm15107 (ENSMUSG00000072930) Gm15080 (ENSMUSG00000072931) Gm15128 (ENSMUSG00000095872) Lrch2 (ENSMUSG00000031290) Vmn1r239-ps (ENSMUSG00000067262) Mus_C ANCESTRAL SPECIES 22 ENSGT00940000159667 ENSGT00940000155614 ENSGT00390000010825.a ENSGT00940000155170 ENSGT00940000156319 ENSGT00940000157847.h ENSGT00530000063168.a.a.b.g ENSGT00940000160145.b ENSGT00390000012692 ENSGT00940000159438 ENSGT00940000155877 ENSGT00940000162980 ENSGT00940000161795 #19 ENSGT00940000162763 #20 ENSGT00950000182835.c.c #21 ENSGT00530000063540.a #22 ENSGT00940000159912 #23 ENSGT00510000049526 ENSGT00940000160039 ENSGT00940000159971 ENSGT01050000244937.a.b.a ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT01060000248594.e.a ENSGT00510000047493.e ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000160983 ENSGT00730000110943.A.d spretus MODERN SPECIES 19 Iqsec2 (MGP_SPRETEiJ_G0034669) Smc1a (MGP_SPRETEiJ_G0034668) Ribc1 (MGP_SPRETEiJ_G0034667) Hsd17b10 (MGP_SPRETEiJ_G0034666) Huwe1 (MGP_SPRETEiJ_G0034665) Phf8 (MGP_SPRETEiJ_G0034664) Fam120c (MGP_SPRETEiJ_G0034663) Wnk3 (MGP_SPRETEiJ_G0034662) Tsr2 (MGP_SPRETEiJ_G0034661) Fgd1 (MGP_SPRETEiJ_G0034660) Gnl3l (MGP_SPRETEiJ_G0034659) Maged2 (MGP_SPRETEiJ_G0034658) #19 Tro (MGP_SPRETEiJ_G0034657) #20 Pfkfb1 (MGP_SPRETEiJ_G0034656) #21 Alas2 (MGP_SPRETEiJ_G0034655) #23 Apex2 (MGP_SPRETEiJ_G0034654) #22 Tmem29 (MGP_SPRETEiJ_G0034653) Lrch2 (MGP_SPRETEiJ_G0034652) Il13ra2 (MGP_SPRETEiJ_G0034651) Htr2c (MGP_SPRETEiJ_G0034650) Amot (MGP_SPRETEiJ_G0034649) Lhfpl1 (MGP_SPRETEiJ_G0034648) Rtl4 (MGP_SPRETEiJ_G0034647) MGP_SPRETEiJ_G0034646 Trpc5 (MGP_SPRETEiJ_G0034645) MGP_SPRETEiJ_G0034644 Dcx (MGP_SPRETEiJ_G0034643) Capn6 (MGP_SPRETEiJ_G0034642) Pak3 (MGP_SPRETEiJ_G0034641) Chrdl1 (MGP_SPRETEiJ_G0034640) Rtl9 (MGP_SPRETEiJ_G0034639) Ryukyu mouse MODERN SPECIES 19 Iqsec2 (MGP_CAROLIEiJ_G0033499) Smc1a (MGP_CAROLIEiJ_G0033498) Ribc1 (MGP_CAROLIEiJ_G0033497) Hsd17b10 (MGP_CAROLIEiJ_G0033496) Huwe1 (MGP_CAROLIEiJ_G0033495) Phf8 (MGP_CAROLIEiJ_G0033494) Fam120c (MGP_CAROLIEiJ_G0033493) Wnk3 (MGP_CAROLIEiJ_G0033492) Tsr2 (MGP_CAROLIEiJ_G0033491) Fgd1 (MGP_CAROLIEiJ_G0033490) Gnl3l (MGP_CAROLIEiJ_G0033489) Maged2 (MGP_CAROLIEiJ_G0033488) #19 Tro (MGP_CAROLIEiJ_G0033487) #20 Pfkfb1 (MGP_CAROLIEiJ_G0033486) #21 Alas2 (MGP_CAROLIEiJ_G0033485) #23 Apex2 (MGP_CAROLIEiJ_G0033484) #22 Tmem29 (MGP_CAROLIEiJ_G0033483) Lrch2 (MGP_CAROLIEiJ_G0033482) Il13ra2 (MGP_CAROLIEiJ_G0033481) Htr2c (MGP_CAROLIEiJ_G0033480) MGP_CAROLIEiJ_G0033479 MGP_CAROLIEiJ_G0033478 Amot (MGP_CAROLIEiJ_G0033477) Lhfpl1 (MGP_CAROLIEiJ_G0033476) Rtl4 (MGP_CAROLIEiJ_G0033475) Trpc5 (MGP_CAROLIEiJ_G0033474) MGP_CAROLIEiJ_G0033473 Dcx (MGP_CAROLIEiJ_G0033472) Capn6 (MGP_CAROLIEiJ_G0033471) Pak3 (MGP_CAROLIEiJ_G0033470) Chrdl1 (MGP_CAROLIEiJ_G0033469) Shrew mouse MODERN SPECIES 23 Iqsec2 (MGP_PahariEiJ_G0032038) Smc1a (MGP_PahariEiJ_G0032037) Ribc1 (MGP_PahariEiJ_G0032036) Hsd17b10 (MGP_PahariEiJ_G0032035) Huwe1 (MGP_PahariEiJ_G0032034) Phf8 (MGP_PahariEiJ_G0032033) Fam120c (MGP_PahariEiJ_G0032032) Wnk3 (MGP_PahariEiJ_G0032031) Tsr2 (MGP_PahariEiJ_G0032030) Fgd1 (MGP_PahariEiJ_G0032029) Gnl3l (MGP_PahariEiJ_G0032028) Maged2 (MGP_PahariEiJ_G0032027) #19 MGP_PahariEiJ_G0032026 #20 Pfkfb1 (MGP_PahariEiJ_G0032025) #21 Alas2 (MGP_PahariEiJ_G0032024) #23 Apex2 (MGP_PahariEiJ_G0032023) #22 Tmem29 (MGP_PahariEiJ_G0032022) Lrch2 (MGP_PahariEiJ_G0032021) Il13ra2 (MGP_PahariEiJ_G0032020) Htr2c (MGP_PahariEiJ_G0032019) Amot (MGP_PahariEiJ_G0032018) Lhfpl1 (MGP_PahariEiJ_G0032017) Rtl4 (MGP_PahariEiJ_G0032016) Trpc5 (MGP_PahariEiJ_G0032015) MGP_PahariEiJ_G0032014 MGP_PahariEiJ_G0032013 Dcx (MGP_PahariEiJ_G0032012) Capn6 (MGP_PahariEiJ_G0032011) Pak3 (MGP_PahariEiJ_G0032010) Chrdl1 (MGP_PahariEiJ_G0032009) Rtl9 (MGP_PahariEiJ_G0032008) Rat DUPLICATION Rat MODERN SPECIES 5 Hs3st1 (ENSRNOG00000068537) AABR07015759.1 (ENSRNOG00000033640) Rab28 (ENSRNOG00000017074) Nkx3-2 (ENSRNOG00000060782) Bod1l1 (ENSRNOG00000050437) RGD1561694 (ENSRNOG00000029107) Rps11-ps1 (ENSRNOG00000064268) Rab5al1 (ENSRNOG00000062595) Cpeb2 (ENSRNOG00000005043) Isca2-ps1 (ENSRNOG00000005077) C1qtnf7 (ENSRNOG00000005094) Cc2d2a (ENSRNOG00000059715) Fbxl5 (ENSRNOG00000005261) Bst1 (ENSRNOG00000003064) Cd38 (ENSRNOG00000003069) Apex2l1 (ENSRNOG00000026046) #22 Fgfbp1 (ENSRNOG00000003095) Prom1 (ENSRNOG00000003098) Tapt1 (ENSRNOG00000003174) Ldb2 (ENSRNOG00000003205) ENSRNOG00000069412 Qdpr (ENSRNOG00000003253) Clrn2 (ENSRNOG00000027195) Lap3 (ENSRNOG00000003289) Med28 (ENSRNOG00000003592) Fam184b (ENSRNOG00000003704) Ncapg (ENSRNOG00000038572) Lcorl (ENSRNOG00000003787) ENSRNOG00000068270 Slit2 (ENSRNOG00000003840) Pacrgl (ENSRNOG00000004140) Rat MODERN SPECIES 46 Huwe1 (ENSRNOG00000061262) Phf8 (ENSRNOG00000002708) LOC100362724 (ENSRNOG00000038965) FAM120C (ENSRNOG00000062231) AABR07037412.1 (ENSRNOG00000030999) Wnk3 (ENSRNOG00000002537) Tsr2 (ENSRNOG00000064917) Fgd1 (ENSRNOG00000038970) Gnl3l (ENSRNOG00000002509) AC115420.1 (ENSRNOG00000040249) Itih6-ps1 (ENSRNOG00000069211) Maged2 (ENSRNOG00000002449) #19 AABR07037520.1 (ENSRNOG00000047491) Tro (ENSRNOG00000067844) #20 Pfkfb1 (ENSRNOG00000000165) #21 Apex2 (ENSRNOG00000000166) #22 Alas2 (ENSRNOG00000000167) #23 Fam104b (ENSRNOG00000049908) ENSRNOG00000070642 Rpgr-ps1 (ENSRNOG00000062329) LOC102546830 (ENSRNOG00000059783) Usp51 (ENSRNOG00000021434) Mageh1 (ENSRNOG00000003178) Foxr2 (ENSRNOG00000030619) RragB (ENSRNOG00000062421) #24 Rpl35-ps8 (ENSRNOG00000003158) Klf8 (ENSRNOG00000065004) #25 Ubqln2 (ENSRNOG00000003099) #26 LOC681355 (ENSRNOG00000069375) LOC102551133 (ENSRNOG00000063966) Spin2a (ENSRNOG00000031286) ##28 Upper Galilee mountains blind mole rat MODERN SPECIES 1044 Tsr2 (ENSNGAG00000021351) Fgd1 (ENSNGAG00000000668) Gnl3l (ENSNGAG00000005965) Maged2 (ENSNGAG00000010942) #19 ENSNGAG00000011855 #20 Pfkfb1 (ENSNGAG00000012590) #21 Apex2 (ENSNGAG00000013576) #22 Alas2 (ENSNGAG00000014787) #23 ENSNGAG00000015072 Lesser Egyptian jerboa MODERN SPECIES 182 Smc1a (ENSJJAG00000012909) Ribc1 (ENSJJAG00000013117) ENSJJAG00000014089 Huwe1 (ENSJJAG00000016223) Phf8 (ENSJJAG00000006057) Fam120c (ENSJJAG00000022074) Wnk3 (ENSJJAG00000003498) Tsr2 (ENSJJAG00000004561) Fgd1 (ENSJJAG00000010191) Gnl3l (ENSJJAG00000011439) Maged2 (ENSJJAG00000012160) #19 ENSJJAG00000013055 #20 Pfkfb1 (ENSJJAG00000019218) #21 Apex2 (ENSJJAG00000019611) #22 Alas2 (ENSJJAG00000020431) #23 ENSJJAG00000020716 Mageh1 (ENSJJAG00000012620) Rragb (ENSJJAG00000021386) #24 Ubqln2 (ENSJJAG00000012630) #26 Nbdy (ENSJJAG00000012634) #27 ENSJJAG00000012653 ##28 ENSJJAG00000022137 ##28 ENSJJAG00000000063 ENSJJAG00000012659 Shroom4 (ENSJJAG00000001572) Dgkk (ENSJJAG00000011426) Akap4 (ENSJJAG00000012716) Clcn5 (ENSJJAG00000015570) Usp27x (ENSJJAG00000017064)