Bilateria	ANCESTRAL SPECIES																	ENSGT01030000234579.C #22
Chordata	ANCESTRAL SPECIES																	ENSGT01030000234579.C #22
Vertebrata	ANCESTRAL SPECIES	118															ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23
Gnathostomata	ANCESTRAL SPECIES	663															ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25
Euteleostomi	ANCESTRAL SPECIES	65	ENSGT00940000166107	ENSGT00940000166930	ENSGT00530000063528.B	ENSGT00940000154517	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470	ENSGT00950000182827.A	ENSGT00390000010308	ENSGT00940000158556 #27	ENSGT00950000183022.a.b #26	ENSGT00940000157829 #15	ENSGT00950000182900.C #13	ENSGT00510000047120 #12	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00390000017311
Sarcopterygii	ANCESTRAL SPECIES	229				ENSGT00940000166107	ENSGT00940000166930	ENSGT00530000063528.B	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000010308	ENSGT00940000158556 #27	ENSGT00950000183022.a.b #26	ENSGT00940000157829 #15	ENSGT00950000182900.C #13	ENSGT00510000047120 #12	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00390000017311	ENSGT00940000159906
Tetrapoda	ANCESTRAL SPECIES	91															ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00940000164470	ENSGT00950000182827.A	ENSGT00530000063528.B	ENSGT00940000166930	ENSGT00940000166107	ENSGT00940000160514	ENSGT00940000155600.b	ENSGT00990000203619.A.a	ENSGT01060000248589.C
Amniota	ANCESTRAL SPECIES	51	ENSGT00390000003645	ENSGT00940000160248	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00970000196888	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00940000164470	ENSGT00950000182827.A	ENSGT00940000161699	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749	ENSGT00940000173558
Mammalia	ANCESTRAL SPECIES	5	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37	ENSGT00940000162280
Theria	ANCESTRAL SPECIES	12	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37	ENSGT00940000162280
Eutheria	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Glires	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Lesser Egyptian jerboa	MODERN SPECIES	68	Creg1 (ENSJJAG00000002260) #7	Rcsd1 (ENSJJAG00000011303) #8	ENSJJAG00000017172 #9	ENSJJAG00000016985 #10	Adcy10 (ENSJJAG00000010438) #11	Mpc2 (ENSJJAG00000023856) #12	Dcaf6 (ENSJJAG00000006446) #13	ENSJJAG00000023724 #14	Gpr161 (ENSJJAG00000020745) #15	ENSJJAG00000011484 #16	Sft2d2 (ENSJJAG00000018560) #17	Tbx19 (ENSJJAG00000022328) #18	ENSJJAG00000011688 #19	Xcl1 (ENSJJAG00000014577) #20	Dpt (ENSJJAG00000021367) #21	Atp1b1 (ENSJJAG00000017903) #22	Nme7 (ENSJJAG00000013080) #23	Blzf1 (ENSJJAG00000012171) #24	Ccdc181 (ENSJJAG00000002620) #25	Slc19a2 (ENSJJAG00000009790) #26	F5 (ENSJJAG00000020633) #27	Selp (ENSJJAG00000000498) #28	Sell (ENSJJAG00000011229) #29	Sele (ENSJJAG00000004484) #30	Mettl18 (ENSJJAG00000018499) #31	BC055324 (ENSJJAG00000018870) #32	Scyl3 (ENSJJAG00000015600) #33	Kifap3 (ENSJJAG00000017802) #34	Mettl11b (ENSJJAG00000024419) #35	Gorab (ENSJJAG00000019951) #36	Prrx1 (ENSJJAG00000015281) #37
Muroidea	ANCESTRAL SPECIES	9	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1874								Dcaf6 (ENSNGAG00000000565) #13	Gpr161 (ENSNGAG00000015606) #15	ENSNGAG00000012044	ENSNGAG00000011114	Sft2d2 (ENSNGAG00000011625) #17	Tbx19 (ENSNGAG00000017170) #18	ENSNGAG00000015040	Dpt (ENSNGAG00000011655) #21	Atp1b1 (ENSNGAG00000008905) #22	Nme7 (ENSNGAG00000013080) #23	Blzf1 (ENSNGAG00000017469) #24	Ccdc181 (ENSNGAG00000013174) #25	Slc19a2 (ENSNGAG00000020534) #26	F5 (ENSNGAG00000019816) #27	Selp (ENSNGAG00000010565) #28	Sell (ENSNGAG00000020396) #29	Sele (ENSNGAG00000016163) #30	Mettl18 (ENSNGAG00000018612) #31	BC055324 (ENSNGAG00000012330) #32	Scyl3 (ENSNGAG00000013015) #33	Mettl11b (ENSNGAG00000010984) #35	Gorab (ENSNGAG00000010523) #36
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Chinese hamster chok1gshd	MODERN SPECIES	2	Dusp27 (ENSCGRG00001024829)	Pou2f1 (ENSCGRG00001022456)	Cd247 (ENSCGRG00001012304)	Creg1 (ENSCGRG00001022812) #7	Rcsd1 (ENSCGRG00001024246) #8	Mpzl1 (ENSCGRG00001020501)	Adcy10 (ENSCGRG00001005211) #11	ENSCGRG00001009918 #12	Dcaf6 (ENSCGRG00001018018) #13	Gpr161 (ENSCGRG00001023574) #15	ENSCGRG00001024517	Sft2d2 (ENSCGRG00001017736) #17	Tbx19 (ENSCGRG00001007672) #18	Xcl1 (ENSCGRG00001012250) #20	Dpt (ENSCGRG00001013109) #21	Atp1b1 (ENSCGRG00001016872) #22	Nme7 (ENSCGRG00001019201) #23	Blzf1 (ENSCGRG00001011366) #24	Ccdc181 (ENSCGRG00001013469) #25	Slc19a2 (ENSCGRG00001020041) #26	F5 (ENSCGRG00001024984) #27	Selp (ENSCGRG00001012287) #28	Sell (ENSCGRG00001010988) #29	Sele (ENSCGRG00001020333) #30	Mettl18 (ENSCGRG00001002456) #31	BC055324 (ENSCGRG00001014892) #32	Scyl3 (ENSCGRG00001009812) #33	ENSCGRG00001001308 #34	Mettl11b (ENSCGRG00001013692) #35	ENSCGRG00001015559	Gorab (ENSCGRG00001011913) #36
Golden Hamster	MODERN SPECIES	644	Pou2f1 (ENSMAUG00000018678)	ENSMAUG00000020137	Creg1 (ENSMAUG00000003485) #7	Rcsd1 (ENSMAUG00000022012) #8	Mpzl1 (ENSMAUG00000021865)	Adcy10 (ENSMAUG00000020332) #11	Mpc2 (ENSMAUG00000014713) #12	Dcaf6 (ENSMAUG00000002917) #13	Gpr161 (ENSMAUG00000007613) #15	ENSMAUG00000018504 #16	Sft2d2 (ENSMAUG00000016885) #17	Tbx19 (ENSMAUG00000018387) #18	Xcl1 (ENSMAUG00000001442) #20	Dpt (ENSMAUG00000016412) #21	ENSMAUG00000021223	Atp1b1 (ENSMAUG00000017529) #22	Nme7 (ENSMAUG00000015900) #23	Blzf1 (ENSMAUG00000016826) #24	Ccdc181 (ENSMAUG00000004092) #25	Slc19a2 (ENSMAUG00000015055) #26	F5 (ENSMAUG00000005793) #27	Selp (ENSMAUG00000015150) #28	Sell (ENSMAUG00000016954) #29	Sele (ENSMAUG00000016853) #30	Mettl18 (ENSMAUG00000022088) #31	ENSMAUG00000011078 #32	Scyl3 (ENSMAUG00000015793) #33	Kifap3 (ENSMAUG00000002111) #34	Mettl11b (ENSMAUG00000019562) #35	Gorab (ENSMAUG00000013513) #36	Prrx1 (ENSMAUG00000018606) #37
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Prairie vole	MODERN SPECIES	80													ENSMOCG00000001226	Dpt (ENSMOCG00000016688) #21	ENSMOCG00000011949	Atp1b1 (ENSMOCG00000007734) #22	Nme7 (ENSMOCG00000022787) #23	Blzf1 (ENSMOCG00000000491) #24	Ccdc181 (ENSMOCG00000022802) #25	Slc19a2 (ENSMOCG00000021117) #26	F5 (ENSMOCG00000005939) #27	Selp (ENSMOCG00000021475) #28	Sell (ENSMOCG00000021443) #29	Sele (ENSMOCG00000005745) #30	Mettl18 (ENSMOCG00000023028) #31	BC055324 (ENSMOCG00000015329) #32	Scyl3 (ENSMOCG00000021134) #33	Kifap3 (ENSMOCG00000020097) #34	Mettl11b (ENSMOCG00000016125) #35	Gorab (ENSMOCG00000013670) #36	Prrx1 (ENSMOCG00000012879) #37
Northern American deer mouse	MODERN SPECIES	2	Cd247 (ENSPEMG00000022519)	Creg1 (ENSPEMG00000021993) #7	Rcsd1 (ENSPEMG00000022454) #8	Mpzl1 (ENSPEMG00000022310)	ENSPEMG00000030485	Adcy10 (ENSPEMG00000009112) #11	Mpc2 (ENSPEMG00000022372) #12	Dcaf6 (ENSPEMG00000023920) #13	Gpr161 (ENSPEMG00000025952) #15	Tiprl (ENSPEMG00000023157)	ENSPEMG00000023312	Sft2d2 (ENSPEMG00000015870) #17	Tbx19 (ENSPEMG00000022626) #18	Xcl1 (ENSPEMG00000019474) #20	Dpt (ENSPEMG00000019351) #21	Atp1b1 (ENSPEMG00000020031) #22	ENSPEMG00000030544	Nme7 (ENSPEMG00000020011) #23	Blzf1 (ENSPEMG00000019649) #24	Ccdc181 (ENSPEMG00000019471) #25	Slc19a2 (ENSPEMG00000019561) #26	F5 (ENSPEMG00000019577) #27	Selp (ENSPEMG00000020102) #28	Sell (ENSPEMG00000015680) #29	Sele (ENSPEMG00000019779) #30	Mettl18 (ENSPEMG00000019435) #31	BC055324 (ENSPEMG00000006940) #32	Scyl3 (ENSPEMG00000019752) #33	Kifap3 (ENSPEMG00000020030) #34	Mettl11b (ENSPEMG00000026229) #35	Gorab (ENSPEMG00000019525) #36
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Rat	MODERN SPECIES	4	Styxl2 (ENSRNOG00000003722)	Pou2f1 (ENSRNOG00000003581)	Cd247 (ENSRNOG00000003298)	Creg1 (ENSRNOG00000003291) #7	Rcsd1 (ENSRNOG00000003283) #8	Mpzl1 (ENSRNOG00000003248)	Adcy10 (ENSRNOG00000053410) #11	Mpc2 (ENSRNOG00000003150) #12	Dcaf6 (ENSRNOG00000003078) #13	Gpr161 (ENSRNOG00000003073) #15	Tiprl (ENSRNOG00000003048)	Sft2d2 (ENSRNOG00000003038) #17	Tbx19 (ENSRNOG00000002979) #18	Xcl1 (ENSRNOG00000002964) #20	Dpt (ENSRNOG00000002947) #21	Atp1b1 (ENSRNOG00000002934) #22	Nme7 (ENSRNOG00000002898) #23	Blzf1 (ENSRNOG00000002884) #24	Ccdc181 (ENSRNOG00000002860) #25	Slc19a2 (ENSRNOG00000002839) #26	F5 (ENSRNOG00000057855) #27	Selp (ENSRNOG00000002794) #28	Sell (ENSRNOG00000002776) #29	Sele (ENSRNOG00000002723) #30	Mettl18 (ENSRNOG00000025189) #31	LOC498265 (ENSRNOG00000059276) #32	Scyl3 (ENSRNOG00000025318) #33	Kifap3 (ENSRNOG00000002544) #34	Ntmt2 (ENSRNOG00000025415) #35	Gorab (ENSRNOG00000003861) #36	Prrx1 (ENSRNOG00000003720) #37
Mus	ANCESTRAL SPECIES	5	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Shrew mouse	MODERN SPECIES	18	Dusp27 (MGP_PahariEiJ_G0028049)	Pou2f1 (MGP_PahariEiJ_G0028048)	Cd247 (MGP_PahariEiJ_G0028047)	Creg1 (MGP_PahariEiJ_G0028046) #7	Rcsd1 (MGP_PahariEiJ_G0028045) #8	Mpzl1 (MGP_PahariEiJ_G0028044)	Adcy10 (MGP_PahariEiJ_G0028043) #11	Mpc2 (MGP_PahariEiJ_G0028042) #12	Dcaf6 (MGP_PahariEiJ_G0028041) #13	Gpr161 (MGP_PahariEiJ_G0028040) #15	Tiprl (MGP_PahariEiJ_G0028039)	Sft2d2 (MGP_PahariEiJ_G0028038) #17	Tbx19 (MGP_PahariEiJ_G0028037) #18	XCL1 (MGP_PahariEiJ_G0028036) #20	Dpt (MGP_PahariEiJ_G0028035) #21	Atp1b1 (MGP_PahariEiJ_G0028034) #22	Nme7 (MGP_PahariEiJ_G0028033) #23	Blzf1 (MGP_PahariEiJ_G0028032) #24	Ccdc181 (MGP_PahariEiJ_G0028031) #25	Slc19a2 (MGP_PahariEiJ_G0028030) #26	F5 (MGP_PahariEiJ_G0028029) #27	Selp (MGP_PahariEiJ_G0028028) #28	Sell (MGP_PahariEiJ_G0028027) #29	Sele (MGP_PahariEiJ_G0028026) #30	Mettl18 (MGP_PahariEiJ_G0028025) #31	BC055324 (MGP_PahariEiJ_G0028024) #32	Scyl3 (MGP_PahariEiJ_G0028023) #33	Kifap3 (MGP_PahariEiJ_G0028022) #34	Mettl11b (MGP_PahariEiJ_G0028021) #35	Gorab (MGP_PahariEiJ_G0028020) #36	Prrx1 (MGP_PahariEiJ_G0028019) #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Ryukyu mouse	MODERN SPECIES		Dusp27 (MGP_CAROLIEiJ_G0014812)	Pou2f1 (MGP_CAROLIEiJ_G0014811)	MGP_CAROLIEiJ_G0014810	Creg1 (MGP_CAROLIEiJ_G0014809) #7	Rcsd1 (MGP_CAROLIEiJ_G0014808) #8	Mpzl1 (MGP_CAROLIEiJ_G0014807)	Adcy10 (MGP_CAROLIEiJ_G0014806) #11	Mpc2 (MGP_CAROLIEiJ_G0014805) #12	Dcaf6 (MGP_CAROLIEiJ_G0014804) #13	Gpr161 (MGP_CAROLIEiJ_G0014803) #15	Tiprl (MGP_CAROLIEiJ_G0014802)	Sft2d2 (MGP_CAROLIEiJ_G0014801) #17	Tbx19 (MGP_CAROLIEiJ_G0014800) #18	Xcl1 (MGP_CAROLIEiJ_G0014799) #20	Dpt (MGP_CAROLIEiJ_G0014798) #21	Atp1b1 (MGP_CAROLIEiJ_G0014797) #22	Nme7 (MGP_CAROLIEiJ_G0014796) #23	Blzf1 (MGP_CAROLIEiJ_G0014795) #24	Ccdc181 (MGP_CAROLIEiJ_G0014794) #25	Slc19a2 (MGP_CAROLIEiJ_G0014793) #26	F5 (MGP_CAROLIEiJ_G0014792) #27	Selp (MGP_CAROLIEiJ_G0014791) #28	Sell (MGP_CAROLIEiJ_G0014790) #29	Sele (MGP_CAROLIEiJ_G0014789) #30	Mettl18 (MGP_CAROLIEiJ_G0014788) #31	BC055324 (MGP_CAROLIEiJ_G0014787) #32	Scyl3 (MGP_CAROLIEiJ_G0014786) #33	Kifap3 (MGP_CAROLIEiJ_G0014785) #34	Mettl11b (MGP_CAROLIEiJ_G0014784) #35	Gorab (MGP_CAROLIEiJ_G0014783) #36	Prrx1 (MGP_CAROLIEiJ_G0014782) #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Mouse	MODERN SPECIES		Dusp27 (ENSMUSG00000026564)	Pou2f1 (ENSMUSG00000026565)	Cd247 (ENSMUSG00000005763)	Creg1 (ENSMUSG00000040713) #7	Rcsd1 (ENSMUSG00000040723) #8	Mpzl1 (ENSMUSG00000026566)	Adcy10 (ENSMUSG00000026567) #11	Mpc2 (ENSMUSG00000026568) #12	Dcaf6 (ENSMUSG00000026571) #13	Gpr161 (ENSMUSG00000040836) #15	Tiprl (ENSMUSG00000040843)	Sft2d2 (ENSMUSG00000040848) #17	Tbx19 (ENSMUSG00000026572) #18	Xcl1 (ENSMUSG00000026573) #20	Dpt (ENSMUSG00000026574) #21	Atp1b1 (ENSMUSG00000026576) #22	Nme7 (ENSMUSG00000026575) #23	Blzf1 (ENSMUSG00000026577) #24	Ccdc181 (ENSMUSG00000026578) #25	Slc19a2 (ENSMUSG00000040918) #26	F5 (ENSMUSG00000026579) #27	Selp (ENSMUSG00000026580) #28	Sell (ENSMUSG00000026581) #29	Sele (ENSMUSG00000026582) #30	Mettl18 (ENSMUSG00000041396) #31	BC055324 (ENSMUSG00000041406) #32	Scyl3 (ENSMUSG00000026584) #33	Kifap3 (ENSMUSG00000026585) #34	Mettl11b (ENSMUSG00000040113) #35	Gorab (ENSMUSG00000040124) #36	Prrx1 (ENSMUSG00000026586) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
spretus	MODERN SPECIES		Dusp27 (MGP_SPRETEiJ_G0015619)	Pou2f1 (MGP_SPRETEiJ_G0015618)	Cd247 (MGP_SPRETEiJ_G0015617)	Creg1 (MGP_SPRETEiJ_G0015616) #7	Rcsd1 (MGP_SPRETEiJ_G0015615) #8	Mpzl1 (MGP_SPRETEiJ_G0015614)	Adcy10 (MGP_SPRETEiJ_G0015613) #11	Mpc2 (MGP_SPRETEiJ_G0015612) #12	Dcaf6 (MGP_SPRETEiJ_G0015611) #13	Gpr161 (MGP_SPRETEiJ_G0015610) #15	Tiprl (MGP_SPRETEiJ_G0015609)	Sft2d2 (MGP_SPRETEiJ_G0015608) #17	Tbx19 (MGP_SPRETEiJ_G0015607) #18	Xcl1 (MGP_SPRETEiJ_G0015606) #20	Dpt (MGP_SPRETEiJ_G0015605) #21	Atp1b1 (MGP_SPRETEiJ_G0015604) #22	Nme7 (MGP_SPRETEiJ_G0015603) #23	Blzf1 (MGP_SPRETEiJ_G0015602) #24	Ccdc181 (MGP_SPRETEiJ_G0015601) #25	Slc19a2 (MGP_SPRETEiJ_G0015600) #26	F5 (MGP_SPRETEiJ_G0015599) #27	Selp (MGP_SPRETEiJ_G0015598) #28	Sell (MGP_SPRETEiJ_G0015597) #29	Sele (MGP_SPRETEiJ_G0015596) #30	Mettl18 (MGP_SPRETEiJ_G0015595) #31	BC055324 (MGP_SPRETEiJ_G0015594) #32	Scyl3 (MGP_SPRETEiJ_G0015593) #33	Kifap3 (MGP_SPRETEiJ_G0015592) #34	Mettl11b (MGP_SPRETEiJ_G0015591) #35	Gorab (MGP_SPRETEiJ_G0015590) #36	Prrx1 (MGP_SPRETEiJ_G0015589) #37
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3040																ENSMSIG00000021885 #22	Nme7 (ENSMSIG00000021906) #23	Blzf1 (ENSMSIG00000021978) #24	Ccdc181 (ENSMSIG00000022010) #25	Slc19a2 (ENSMSIG00000022030) #26	F5 (ENSMSIG00000022110) #27	Selp (ENSMSIG00000022173) #28	Sell (ENSMSIG00000022221) #29	Sele (ENSMSIG00000022309) #30	Mettl18 (ENSMSIG00000022324) #31	ENSMSIG00000022330 #32	Scyl3 (ENSMSIG00000022413) #33	Kifap3 (ENSMSIG00000022519) #34	Mettl11b (ENSMSIG00000022714) #35	Gorab (ENSMSIG00000022735) #36	Prrx1 (ENSMSIG00000022763) #37
Steppe mouse	MODERN SPECIES	1356																ENSMSIG00000001190 #22
Kangaroo rat	MODERN SPECIES	346	Aldh7a1 (ENSDORG00000005733)	Gramd3 (ENSDORG00000005732)	Zfp608 (ENSDORG00000009366)	Csnk1g3 (ENSDORG00000010187)	Cep120 (ENSDORG00000015742)	Prdm6 (ENSDORG00000009966)	Ppic (ENSDORG00000015659)	Snx24 (ENSDORG00000015658)	Snx2 (ENSDORG00000015224)	Sncaip (ENSDORG00000014295)	ENSDORG00000026417	1700034E13Rik (ENSDORG00000025106)	Lox (ENSDORG00000025532)	Tbx19 (ENSDORG00000014860) #18	Dpt (ENSDORG00000002652) #21	Atp1b1 (ENSDORG00000015637) #22	Nme7 (ENSDORG00000015638) #23	Blzf1 (ENSDORG00000015639) #24	Slc19a2 (ENSDORG00000004902) #26	ENSDORG00000030142 #32	Kifap3 (ENSDORG00000001434) #34	Mettl11b (ENSDORG00000001437) #35	ENSDORG00000003154 #37	Fmo3 (ENSDORG00000006804)	Fmo2 (ENSDORG00000004731)	Fmo1 (ENSDORG00000029306)	Prrc2c (ENSDORG00000001422)	Mettl13 (ENSDORG00000011976)	Dnm3 (ENSDORG00000002505)	Pigc (ENSDORG00000030248)	Suco (ENSDORG00000011895)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00940000159466 #37	ENSGT00390000014886 #36	ENSGT00390000008371.a #35	ENSGT00390000003574 #34
Naked mole-rat female	MODERN SPECIES	20	MPZL1 (ENSHGLG00000050117)	ENSHGLG00000042405 #11	ENSHGLG00000004748 #11	ENSHGLG00000050084	ENSHGLG00000034812 #12	ENSHGLG00000020687	DCAF6 (ENSHGLG00000007535) #13	GPR161 (ENSHGLG00000009958) #15	TIPRL (ENSHGLG00000010990)	ENSHGLG00000038783 #17	TBX19 (ENSHGLG00000001534) #18	ENSHGLG00000001604 #20	ENSHGLG00000033916 #20	DPT (ENSHGLG00000001646) #21	ENSHGLG00000046760	ATP1B1 (ENSHGLG00000041771) #22	NME7 (ENSHGLG00000002119) #23	BLZF1 (ENSHGLG00000003011) #24	ENSHGLG00000050690 #25	ENSHGLG00000040907	SLC19A2 (ENSHGLG00000001890) #26	F5 (ENSHGLG00000002250) #27	SELP (ENSHGLG00000001876) #28	SELL (ENSHGLG00000048749) #29	ENSHGLG00000002768 #30	METTL18 (ENSHGLG00000020074) #31	ENSHGLG00000018896 #32	ENSHGLG00000019520 #33	ENSHGLG00000036520	ENSHGLG00000021140	ENSHGLG00000038928
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00940000159466 #37	ENSGT00390000014886 #36	ENSGT00390000008371.a #35	ENSGT00390000003574 #34
Guinea pig	MODERN SPECIES	39	STYXL2 (ENSCPOG00000002322)	POU2F1 (ENSCPOG00000008237)	CD247 (ENSCPOG00000022786)	CREG1 (ENSCPOG00000010738) #7	RCSD1 (ENSCPOG00000033238) #8	MPZL1 (ENSCPOG00000038506)	ADCY10 (ENSCPOG00000003852) #11	MPC2 (ENSCPOG00000037670) #12	DCAF6 (ENSCPOG00000013095) #13	GPR161 (ENSCPOG00000032385) #15	TIPRL (ENSCPOG00000034819)	SFT2D2 (ENSCPOG00000039073) #17	TBX19 (ENSCPOG00000012456) #18	ENSCPOG00000032648 #20	DPT (ENSCPOG00000007553) #21	ATP1B1 (ENSCPOG00000039107) #22	NME7 (ENSCPOG00000004222) #23	BLZF1 (ENSCPOG00000007333) #24	CCDC181 (ENSCPOG00000024492) #25	SLC19A2 (ENSCPOG00000006894) #26	F5 (ENSCPOG00000006900) #27	SELP (ENSCPOG00000006911) #28	SELL (ENSCPOG00000035058) #29	SELE (ENSCPOG00000012409) #30	METTL18 (ENSCPOG00000027533) #31	C1orf112 (ENSCPOG00000012270) #32	SCYL3 (ENSCPOG00000026352) #33	PRRX1 (ENSCPOG00000014515) #37	GORAB (ENSCPOG00000012461) #36	NTMT2 (ENSCPOG00000039607) #35	ENSCPOG00000010161 #34
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00940000159466 #37	ENSGT00390000014886 #36	ENSGT00390000008371.a #35	ENSGT00390000003574 #34
Degu	MODERN SPECIES	291	CREG1 (ENSODEG00000002026) #7	RCSD1 (ENSODEG00000002064) #8	MPZL1 (ENSODEG00000002143)	ENSODEG00000018781	ADCY10 (ENSODEG00000002246) #11	ENSODEG00000001149 #12	DCAF6 (ENSODEG00000001207) #13	GPR161 (ENSODEG00000001359) #15	ENSODEG00000001396 #16	ENSODEG00000001403	SFT2D2 (ENSODEG00000001437) #17	TBX19 (ENSODEG00000001542) #18	ENSODEG00000018697	ENSODEG00000001554 #20	DPT (ENSODEG00000001574) #21	ATP1B1 (ENSODEG00000001596) #22
Long-tailed chinchilla	MODERN SPECIES	169	STYXL2 (ENSCLAG00000006188)	ENSCLAG00000005067	POU2F1 (ENSCLAG00000005927)	CD247 (ENSCLAG00000005425)	CREG1 (ENSCLAG00000005740) #7	RCSD1 (ENSCLAG00000004726) #8	ADCY10 (ENSCLAG00000005189) #11	ENSCLAG00000004770 #12	DCAF6 (ENSCLAG00000005742) #13	GPR161 (ENSCLAG00000005310) #15	ENSCLAG00000004496	SFT2D2 (ENSCLAG00000007183) #17	TBX19 (ENSCLAG00000006520) #18	ENSCLAG00000005901 #20	DPT (ENSCLAG00000005439) #21	ATP1B1 (ENSCLAG00000009477) #22	NME7 (ENSCLAG00000007842) #23	BLZF1 (ENSCLAG00000006177) #24	CCDC181 (ENSCLAG00000005303) #25	SLC19A2 (ENSCLAG00000014197) #26	F5 (ENSCLAG00000011798) #27	SELP (ENSCLAG00000005532) #28	SELL (ENSCLAG00000005466) #29	SELE (ENSCLAG00000004901) #30	METTL18 (ENSCLAG00000017821) #31	C1orf112 (ENSCLAG00000012920) #32	SCYL3 (ENSCLAG00000006650) #33	PRRX1 (ENSCLAG00000005839) #37	GORAB (ENSCLAG00000004310) #36	ENSCLAG00000007665 #35	KIFAP3 (ENSCLAG00000011056) #34
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Eurasian red squirrel	MODERN SPECIES	3	GPA33 (ENSSVLG00005007183)	STYXL2 (ENSSVLG00005007140)	ENSSVLG00005006838	CD247 (ENSSVLG00005006678)	CREG1 (ENSSVLG00005006640) #7	RCSD1 (ENSSVLG00005006562) #8	ADCY10 (ENSSVLG00005006248) #11	MPC2 (ENSSVLG00005006196) #12	DCAF6 (ENSSVLG00005005682) #13	GPR161 (ENSSVLG00005005499) #15	TIPRL (ENSSVLG00005005418)	SFT2D2 (ENSSVLG00005005367) #17	TBX19 (ENSSVLG00005024818) #18	ENSSVLG00005024789 #20	DPT (ENSSVLG00005024772) #21	ATP1B1 (ENSSVLG00005024750) #22	NME7 (ENSSVLG00005024722) #23	BLZF1 (ENSSVLG00005024682) #24	CCDC181 (ENSSVLG00005024651) #25	SLC19A2 (ENSSVLG00005024621) #26	F5 (ENSSVLG00005024439) #27	ENSSVLG00005024389	SELP (ENSSVLG00005024333) #28	SELL (ENSSVLG00005024196) #29	ENSSVLG00005024116 #30	ENSSVLG00005023929 #28	ENSSVLG00005023504 #30	METTL18 (ENSSVLG00005023411) #31	ENSSVLG00005023399	C1orf112 (ENSSVLG00005023367) #32	SCYL3 (ENSSVLG00005023322) #33
Marmotini	ANCESTRAL SPECIES	34	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659.q	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Alpin marmot	MODERN SPECIES	29	ENSMMMG00000020541	POU2F1 (ENSMMMG00000020142)	CD247 (ENSMMMG00000020139)	ENSMMMG00000020132 #7	RCSD1 (ENSMMMG00000020128) #8	ENSMMMG00000020122	MPZL1 (ENSMMMG00000020120)	ADCY10 (ENSMMMG00000020099) #11	DCAF6 (ENSMMMG00000018848) #13	GPR161 (ENSMMMG00000018796) #15	TIPRL (ENSMMMG00000018786)	SFT2D2 (ENSMMMG00000018779) #17	TBX19 (ENSMMMG00000018775) #18	ENSMMMG00000018756 #20	DPT (ENSMMMG00000018754) #21	ATP1B1 (ENSMMMG00000018738) #22	NME7 (ENSMMMG00000018711) #23	BLZF1 (ENSMMMG00000018679) #24	CCDC181 (ENSMMMG00000018669) #25	SLC19A2 (ENSMMMG00000018667) #26	F5 (ENSMMMG00000018600) #27	SELP (ENSMMMG00000018590) #28	SELE (ENSMMMG00000018492) #30	METTL18 (ENSMMMG00000018443) #31	C1orf112 (ENSMMMG00000018413) #32	SCYL3 (ENSMMMG00000018300) #33	KIFAP3 (ENSMMMG00000018230) #34	NTMT2 (ENSMMMG00000018220) #35	ENSMMMG00000018202 #36	PRRX1 (ENSMMMG00000018176) #37	ENSMMMG00000018167
Marmotini_b	ANCESTRAL SPECIES	28	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.q #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659.q	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Squirrel	MODERN SPECIES	81	STYXL2 (ENSSTOG00000010472)	POU2F1 (ENSSTOG00000005980)	CD247 (ENSSTOG00000027006)	ENSSTOG00000032814 #7	RCSD1 (ENSSTOG00000027565) #8	MPZL1 (ENSSTOG00000008875)	ADCY10 (ENSSTOG00000003252) #11	ENSSTOG00000034079 #12	DCAF6 (ENSSTOG00000002913) #13	GPR161 (ENSSTOG00000024601) #15	ENSSTOG00000014921	SFT2D2 (ENSSTOG00000030565) #17	TBX19 (ENSSTOG00000019913) #18	ENSSTOG00000014588 #20	DPT (ENSSTOG00000029188) #21	ATP1B1 (ENSSTOG00000011473) #22	NME7 (ENSSTOG00000011478) #23	BLZF1 (ENSSTOG00000011491) #24	CCDC181 (ENSSTOG00000023591) #25	SLC19A2 (ENSSTOG00000008889) #26	F5 (ENSSTOG00000008897) #27	SELP (ENSSTOG00000008931) #28	SELL (ENSSTOG00000008958) #29	SELE (ENSSTOG00000008973) #30	METTL18 (ENSSTOG00000003028) #31	C1orf112 (ENSSTOG00000003029) #32	SCYL3 (ENSSTOG00000003053) #33	KIFAP3 (ENSSTOG00000003065) #34	NTMT2 (ENSSTOG00000003081) #35	GORAB (ENSSTOG00000026492) #36	PRRX1 (ENSSTOG00000023298) #37
Arctic ground squirrel	MODERN SPECIES	314								DCAF6 (ENSUPAG00010011091) #13	GPR161 (ENSUPAG00010011079) #15	ENSUPAG00010011074	TIPRL (ENSUPAG00010011057)	SFT2D2 (ENSUPAG00010011039) #17	TBX19 (ENSUPAG00010011029) #18	ENSUPAG00010011020 #20	DPT (ENSUPAG00010011014) #21	ATP1B1 (ENSUPAG00010010998) #22	NME7 (ENSUPAG00010010951) #23	BLZF1 (ENSUPAG00010010941) #24	CCDC181 (ENSUPAG00010010935) #25	SLC19A2 (ENSUPAG00010010910) #26	F5 (ENSUPAG00010010738) #27	SELP (ENSUPAG00010010702) #28	ENSUPAG00010010678 #30	METTL18 (ENSUPAG00010010675) #31	C1orf112 (ENSUPAG00010010622) #32	SCYL3 (ENSUPAG00010010543) #33	KIFAP3 (ENSUPAG00010010519) #34	NTMT2 (ENSUPAG00010010514) #35	GORAB (ENSUPAG00010010512) #36	PRRX1 (ENSUPAG00010010497) #37	ENSUPAG00010010493
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24
Pika	MODERN SPECIES	1796																ENSOPRG00000003518 #22	ENSOPRG00000003534 #23
Rabbit	MODERN SPECIES	4	ENSOCUG00000035782	POU2F1 (ENSOCUG00000015479)	ENSOCUG00000027626	CREG1 (ENSOCUG00000017651) #7	RCSD1 (ENSOCUG00000002251) #8	MPZL1 (ENSOCUG00000002259)	ADCY10 (ENSOCUG00000002264) #11	ENSOCUG00000004470 #13	GPR161 (ENSOCUG00000025655) #15	TIPRL (ENSOCUG00000014552)	SFT2D2 (ENSOCUG00000023076) #17	TBX19 (ENSOCUG00000014555) #18	ENSOCUG00000012952 #20	ENSOCUG00000029477	DPT (ENSOCUG00000005174) #21	ATP1B1 (ENSOCUG00000006867) #22	ENSOCUG00000006873 #23	BLZF1 (ENSOCUG00000008982) #24	FMO4 (ENSOCUG00000002795)	FMO1 (ENSOCUG00000002788)	FMO2 (ENSOCUG00000005177)	ENSOCUG00000005169	FMO3 (ENSOCUG00000003610)	MROH9 (ENSOCUG00000004105)	PRRX1 (ENSOCUG00000012272) #37	ENSOCUG00000039406	GORAB (ENSOCUG00000017965) #36	NTMT2 (ENSOCUG00000015746) #35	ENSOCUG00000027922	KIFAP3 (ENSOCUG00000013824) #34	SCYL3 (ENSOCUG00000013811) #33
Tree shrew	MODERN SPECIES	2095																ATP1B1 (ENSTBEG00000004617) #22	ENSTBEG00000004772
Primates	ANCESTRAL SPECIES	7	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Tarsier	MODERN SPECIES	6522																ATP1B1 (ENSTSYG00000010215) #22	ENSTSYG00000029400
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cebidae	ANCESTRAL SPECIES	12	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.e #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37	ENSGT00940000162280
Capuchin	MODERN SPECIES	84	POU2F1 (ENSCCAG00000026222)	CD247 (ENSCCAG00000036679)	CREG1 (ENSCCAG00000029390) #7	RCSD1 (ENSCCAG00000017320) #8	MPZL1 (ENSCCAG00000036559)	ADCY10 (ENSCCAG00000020732) #11	ENSCCAG00000038004 #12	DCAF6 (ENSCCAG00000035939) #13	ENSCCAG00000037357 #15	TIPRL (ENSCCAG00000031380)	SFT2D2 (ENSCCAG00000032380) #17	TBX19 (ENSCCAG00000036805) #18	ENSCCAG00000029720	ENSCCAG00000034215 #20	DPT (ENSCCAG00000023611) #21	ATP1B1 (ENSCCAG00000035986) #22	NME7 (ENSCCAG00000021546) #23	BLZF1 (ENSCCAG00000025439) #24	CCDC181 (ENSCCAG00000030458) #25	SLC19A2 (ENSCCAG00000037913) #26	F5 (ENSCCAG00000020831) #27	SELP (ENSCCAG00000035312) #28	SELL (ENSCCAG00000028534) #29	SELE (ENSCCAG00000032933) #30	C1orf112 (ENSCCAG00000025894) #32	SCYL3 (ENSCCAG00000028147) #33	KIFAP3 (ENSCCAG00000010781) #34	NTMT2 (ENSCCAG00000036256) #35	GORAB (ENSCCAG00000034220) #36	ENSCCAG00000030279	PRRX1 (ENSCCAG00000019169) #37
Bolivian squirrel monkey	MODERN SPECIES	69	STYXL2 (ENSSBOG00000035084)	POU2F1 (ENSSBOG00000025169)	CD247 (ENSSBOG00000026118)	CREG1 (ENSSBOG00000030869) #7	RCSD1 (ENSSBOG00000032056) #8	MPZL1 (ENSSBOG00000032480)	ADCY10 (ENSSBOG00000027766) #11	ENSSBOG00000030589 #12	DCAF6 (ENSSBOG00000034143) #13	GPR161 (ENSSBOG00000030060) #15	TIPRL (ENSSBOG00000030225)	SFT2D2 (ENSSBOG00000031966) #17	TBX19 (ENSSBOG00000029923) #18	ENSSBOG00000035482 #20	DPT (ENSSBOG00000024429) #21	ATP1B1 (ENSSBOG00000032878) #22	NME7 (ENSSBOG00000034004) #23	BLZF1 (ENSSBOG00000033672) #24	CCDC181 (ENSSBOG00000036053) #25	SLC19A2 (ENSSBOG00000022009) #26	F5 (ENSSBOG00000020664) #27	IZUMO3 (ENSSBOG00000031342)	ELAVL2 (ENSSBOG00000028114)	DMRTA1 (ENSSBOG00000020210)	CDKN2B (ENSSBOG00000028011)	CDKN2A (ENSSBOG00000030194)	MTAP (ENSSBOG00000020187)	ENSSBOG00000026349	KLHL9 (ENSSBOG00000030862)	IFNA14 (ENSSBOG00000033464)	ENSSBOG00000012028
Marmoset	MODERN SPECIES	9	CREG1 (ENSCJAG00000077028) #7	RCSD1 (ENSCJAG00000017035) #8	MPZL1 (ENSCJAG00000017016)	ADCY10 (ENSCJAG00000016999) #11	MPC2 (ENSCJAG00000016985) #12	DCAF6 (ENSCJAG00000016904) #13	GPR161 (ENSCJAG00000016889) #15	TIPRL (ENSCJAG00000040736)	ENSCJAG00000066070	ENSCJAG00000016838 #17	TBX19 (ENSCJAG00000016812) #18	ENSCJAG00000077652	ENSCJAG00000086614 #20	DPT (ENSCJAG00000082086) #21	ENSCJAG00000063697	ATP1B1 (ENSCJAG00000010317) #22	NME7 (ENSCJAG00000010278) #23	BLZF1 (ENSCJAG00000010255) #24	CCDC181 (ENSCJAG00000010246) #25	SLC19A2 (ENSCJAG00000010232) #26	F5 (ENSCJAG00000010195) #27	SELP (ENSCJAG00000010185) #28	SELL (ENSCJAG00000010174) #29	SELE (ENSCJAG00000010133) #30	METTL18 (ENSCJAG00000022732) #31	C1orf112 (ENSCJAG00000010088) #32	SCYL3 (ENSCJAG00000010050) #33	KIFAP3 (ENSCJAG00000009954) #34	NTMT2 (ENSCJAG00000009943) #35	GORAB (ENSCJAG00000009937) #36	PRRX1 (ENSCJAG00000009928) #37
Mas night monkey	MODERN SPECIES	1256	POU2F1 (ENSANAG00000035188)	CD247 (ENSANAG00000021685)	CREG1 (ENSANAG00000027427) #7	RCSD1 (ENSANAG00000026745) #8	MPZL1 (ENSANAG00000025091)	ADCY10 (ENSANAG00000022104) #11	MPC2 (ENSANAG00000028139) #12	DCAF6 (ENSANAG00000033646) #13	GPR161 (ENSANAG00000037845) #15	TIPRL (ENSANAG00000001897)	SFT2D2 (ENSANAG00000023361) #17	TBX19 (ENSANAG00000036932) #18	ENSANAG00000035650	ENSANAG00000032218 #20	DPT (ENSANAG00000028764) #21	ATP1B1 (ENSANAG00000033196) #22	NME7 (ENSANAG00000029472) #23	BLZF1 (ENSANAG00000033556) #24	CCDC181 (ENSANAG00000001640) #25	SLC19A2 (ENSANAG00000030143) #26	F5 (ENSANAG00000029646) #27	SELP (ENSANAG00000035384) #28	ENSANAG00000034982	SELL (ENSANAG00000037545) #29	SELE (ENSANAG00000032760) #30	C1orf112 (ENSANAG00000021314) #32	SCYL3 (ENSANAG00000024270) #33	KIFAP3 (ENSANAG00000013349) #34	NTMT2 (ENSANAG00000032796) #35	GORAB (ENSANAG00000027377) #36	PRRX1 (ENSANAG00000023837) #37
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00390000005914.a #7	ENSGT00910000146947	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cercopithecidae	ANCESTRAL SPECIES	20	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.e.b #20	ENSGT01100000263557.A.b.b.e.a #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a.w	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120.c #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.e.a #20	ENSGT01100000263557.A.b.b.e.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a.w	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120.c #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.e.a #20	ENSGT01100000263557.A.b.b.e.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT01090000260040.a.a.b.u	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Macaca	ANCESTRAL SPECIES		ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a.w	ENSGT00910000147687	ENSGT00390000001322 #11	ENSGT00510000047120.c #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659.f	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.e.a #20	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.f #20	ENSGT01100000263557.A.b.b.e.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT01090000260040.a.a.b.u	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000005914.a #7	ENSGT01100000263539.b.a.a.a.b.b.a.b.a.a.b	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a.w	ENSGT00910000147687	ENSGT00390000001322 #11	ENSGT00510000047120.c #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659.f	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.e.a #20	ENSGT01100000263557.A.b.b.e.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00980000202103.B.a.a.b	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Rhesus	MODERN SPECIES		CREG1 (ENSMMUG00000063120) #7	ENSMMUG00000062713	RCSD1 (ENSMMUG00000023372) #8	MPZL1 (ENSMMUG00000009184)	ENSMMUG00000057453	ADCY10 (ENSMMUG00000010380) #11	MPC2 (ENSMMUG00000010387) #12	DCAF6 (ENSMMUG00000010389) #13	GPR161 (ENSMMUG00000010395) #15	TIPRL (ENSMMUG00000021166)	SFT2D2 (ENSMMUG00000005283) #17	TBX19 (ENSMMUG00000060729) #18	ENSMMUG00000013779 #20	XCL1 (ENSMMUG00000060218) #20	DPT (ENSMMUG00000002932) #21	ATP1B1 (ENSMMUG00000021078) #22	NME7 (ENSMMUG00000021079) #23	BLZF1 (ENSMMUG00000021080) #24	CCDC181 (ENSMMUG00000000065) #25	SLC19A2 (ENSMMUG00000013039) #26	F5 (ENSMMUG00000042510) #27	SELP (ENSMMUG00000013044) #28	ENSMMUG00000054881	SELL (ENSMMUG00000016579) #29	SELE (ENSMMUG00000016580) #30	METTL18 (ENSMMUG00000016581) #31	C1H1orf112 (ENSMMUG00000016582) #32	SCYL3 (ENSMMUG00000016583) #33	KIFAP3 (ENSMMUG00000010081) #34	NTMT2 (ENSMMUG00000059773) #35	GORAB (ENSMMUG00000014674) #36
Crab-eating macaque	MODERN SPECIES		CD247 (ENSMFAG00000000076)	CREG1 (ENSMFAG00000045348) #7	ENSMFAG00000047258	RCSD1 (ENSMFAG00000039084) #8	MPZL1 (ENSMFAG00000045417)	ADCY10 (ENSMFAG00000032699) #11	ENSMFAG00000051521	DCAF6 (ENSMFAG00000043317) #13	MPC2 (ENSMFAG00000046294) #12	GPR161 (ENSMFAG00000037639) #15	TIPRL (ENSMFAG00000045557)	TBX19 (ENSMFAG00000038069) #18	ENSMFAG00000045925 #20	ENSMFAG00000062392 #20	DPT (ENSMFAG00000045128) #21	ATP1B1 (ENSMFAG00000039661) #22	NME7 (ENSMFAG00000037358) #23	BLZF1 (ENSMFAG00000042415) #24	CCDC181 (ENSMFAG00000041326) #25	SLC19A2 (ENSMFAG00000039988) #26	F5 (ENSMFAG00000045747) #27	SELP (ENSMFAG00000036068) #28	ENSMFAG00000051927	SELL (ENSMFAG00000042617) #29	SELE (ENSMFAG00000001279) #30	METTL18 (ENSMFAG00000022253) #31	C1orf112 (ENSMFAG00000039080) #32	SCYL3 (ENSMFAG00000002890) #33	KIFAP3 (ENSMFAG00000030675) #34	NTMT2 (ENSMFAG00000038829) #35	GORAB (ENSMFAG00000001853) #36
Pig-tailed macaque	MODERN SPECIES	197	RCSD1 (ENSMNEG00000041991) #8	ENSMNEG00000035331	ENSMNEG00000041274	ENSMNEG00000035784	ADCY10 (ENSMNEG00000035818) #11	MPC2 (ENSMNEG00000031370) #12	DCAF6 (ENSMNEG00000031504) #13	GPR161 (ENSMNEG00000027197) #15	TIPRL (ENSMNEG00000037934)	SFT2D2 (ENSMNEG00000044565) #17	TBX19 (ENSMNEG00000024897) #18	ENSMNEG00000033402	ENSMNEG00000042673 #20	ENSMNEG00000036621 #20	DPT (ENSMNEG00000044604) #21	ATP1B1 (ENSMNEG00000042381) #22	NME7 (ENSMNEG00000031493) #23	BLZF1 (ENSMNEG00000038122) #24	CCDC181 (ENSMNEG00000035468) #25	SLC19A2 (ENSMNEG00000035596) #26	F5 (ENSMNEG00000033899) #27	SELP (ENSMNEG00000040941) #28	SELL (ENSMNEG00000033134) #29	SELE (ENSMNEG00000032797) #30	METTL18 (ENSMNEG00000022283) #31	C1orf112 (ENSMNEG00000043950) #32	SCYL3 (ENSMNEG00000036997) #33	KIFAP3 (ENSMNEG00000034297) #34	ENSMNEG00000029064	NTMT2 (ENSMNEG00000028723) #35
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a.w	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120.c #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.e.a #20	ENSGT01100000263557.A.b.b.e.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT01090000260040.a.a.b.u	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Cercopithecinae_d	ANCESTRAL SPECIES	112	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a.w	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120.c #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.e.a #20	ENSGT01100000263557.A.b.b.e.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT01090000260040.a.a.b.u	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Drill	MODERN SPECIES	774	RCSD1 (ENSMLEG00000030412) #8	ENSMLEG00000034741	MPZL1 (ENSMLEG00000039140)	ENSMLEG00000036151	ENSMLEG00000034477	ADCY10 (ENSMLEG00000033410) #11	ENSMLEG00000042016 #12	DCAF6 (ENSMLEG00000030606) #13	GPR161 (ENSMLEG00000035588) #15	TIPRL (ENSMLEG00000024848)	SFT2D2 (ENSMLEG00000040147) #17	TBX19 (ENSMLEG00000044410) #18	ENSMLEG00000043761	ENSMLEG00000006813	DPT (ENSMLEG00000036622) #21	ATP1B1 (ENSMLEG00000029426) #22	NME7 (ENSMLEG00000039211) #23	BLZF1 (ENSMLEG00000042714) #24	CCDC181 (ENSMLEG00000042335) #25	SLC19A2 (ENSMLEG00000043363) #26	F5 (ENSMLEG00000030909) #27	SELP (ENSMLEG00000027550) #28	SELL (ENSMLEG00000026854) #29	SELE (ENSMLEG00000043802) #30	METTL18 (ENSMLEG00000020534) #31	C1orf112 (ENSMLEG00000043049) #32	SCYL3 (ENSMLEG00000038212) #33	KIFAP3 (ENSMLEG00000031444) #34	ENSMLEG00000031097	NTMT2 (ENSMLEG00000043458) #35	GORAB (ENSMLEG00000037041) #36
Sooty mangabey	MODERN SPECIES	317	ENSCATG00000037789	RCSD1 (ENSCATG00000039748) #8	ENSCATG00000021821	ENSCATG00000030678	ADCY10 (ENSCATG00000038734) #11	MPC2 (ENSCATG00000029934) #12	DCAF6 (ENSCATG00000036975) #13	GPR161 (ENSCATG00000020613) #15	TIPRL (ENSCATG00000029690)	SFT2D2 (ENSCATG00000035606) #17	TBX19 (ENSCATG00000034131) #18	ENSCATG00000044902	ENSCATG00000039695 #20	ENSCATG00000041701 #20	DPT (ENSCATG00000040191) #21	ATP1B1 (ENSCATG00000044473) #22	NME7 (ENSCATG00000030857) #23	BLZF1 (ENSCATG00000034463) #24	CCDC181 (ENSCATG00000040283) #25	SLC19A2 (ENSCATG00000023069) #26	F5 (ENSCATG00000033355) #27	SELP (ENSCATG00000030070) #28	SELL (ENSCATG00000038996) #29	SELE (ENSCATG00000022318) #30	C1orf112 (ENSCATG00000034613) #32	SCYL3 (ENSCATG00000037412) #33	ENSCATG00000021035	KIFAP3 (ENSCATG00000041024) #34	ENSCATG00000035443	NTMT2 (ENSCATG00000030788) #35	GORAB (ENSCATG00000030390) #36
Olive baboon	MODERN SPECIES		CREG1 (ENSPANG00000049146) #7	ENSPANG00000044055	RCSD1 (ENSPANG00000022547) #8	MPZL1 (ENSPANG00000018323)	ADCY10 (ENSPANG00000010285) #11	MPC2 (ENSPANG00000031639) #12	DCAF6 (ENSPANG00000006546) #13	GPR161 (ENSPANG00000015261) #15	TIPRL (ENSPANG00000026389)	SFT2D2 (ENSPANG00000008888) #17	TBX19 (ENSPANG00000021432) #18	ENSPANG00000040534 #20	DPT (ENSPANG00000019710) #21	ENSPANG00000043430	ENSPANG00000051371	ATP1B1 (ENSPANG00000005097) #22	ENSPANG00000047492	NME7 (ENSPANG00000017310) #23	BLZF1 (ENSPANG00000009151) #24	CCDC181 (ENSPANG00000008887) #25	SLC19A2 (ENSPANG00000006361) #26	F5 (ENSPANG00000019750) #27	ENSPANG00000040764	SELP (ENSPANG00000011947) #28	SELE (ENSPANG00000007869) #30	SELL (ENSPANG00000020257) #29	METTL18 (ENSPANG00000000141) #31	C1orf112 (ENSPANG00000005096) #32	SCYL3 (ENSPANG00000011375) #33	KIFAP3 (ENSPANG00000004955) #34	NTMT2 (ENSPANG00000019890) #35
Vervet Monkey	MODERN SPECIES	17	ENSCSAG00000010909	POU2F1 (ENSCSAG00000010919)	CD247 (ENSCSAG00000010930)	CREG1 (ENSCSAG00000010936) #7	RCSD1 (ENSCSAG00000010941) #8	MPZL1 (ENSCSAG00000010949)	ADCY10 (ENSCSAG00000011020) #11	DCAF6 (ENSCSAG00000011041) #13	GPR161 (ENSCSAG00000011046) #15	TIPRL (ENSCSAG00000011048)	SFT2D2 (ENSCSAG00000011053) #17	TBX19 (ENSCSAG00000011055) #18	ENSCSAG00000011060 #20	ENSCSAG00000011061 #20	DPT (ENSCSAG00000011064) #21	ATP1B1 (ENSCSAG00000011067) #22	NME7 (ENSCSAG00000011071) #23	BLZF1 (ENSCSAG00000011077) #24	CCDC181 (ENSCSAG00000011089) #25	SLC19A2 (ENSCSAG00000011125) #26	F5 (ENSCSAG00000011149) #27	SELP (ENSCSAG00000011257) #28	SELL (ENSCSAG00000011287) #29	SELE (ENSCSAG00000011294) #30	METTL18 (ENSCSAG00000000235) #31	C1orf112 (ENSCSAG00000011378) #32	SCYL3 (ENSCSAG00000011444) #33	KIFAP3 (ENSCSAG00000011525) #34	NTMT2 (ENSCSAG00000011565) #35	GORAB (ENSCSAG00000011571) #36	PRRX1 (ENSCSAG00000011575) #37
Rhinopithecus	ANCESTRAL SPECIES	36																ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37	ENSGT00940000162280
Black snub-nosed monkey	MODERN SPECIES	248																ATP1B1 (ENSRBIG00000040665) #22	NME7 (ENSRBIG00000035287) #23	BLZF1 (ENSRBIG00000042267) #24	ENSRBIG00000044801	CCDC181 (ENSRBIG00000036613) #25	SLC19A2 (ENSRBIG00000036238) #26	F5 (ENSRBIG00000029647) #27	SELP (ENSRBIG00000044311) #28	SELL (ENSRBIG00000044066) #29	SELE (ENSRBIG00000040228) #30	C1orf112 (ENSRBIG00000040818) #32	SCYL3 (ENSRBIG00000044441) #33	KIFAP3 (ENSRBIG00000030912) #34	NTMT2 (ENSRBIG00000024463) #35	GORAB (ENSRBIG00000029786) #36	PRRX1 (ENSRBIG00000042362) #37
Golden snub-nosed monkey	MODERN SPECIES	1628	ENSRROG00000029572	RCSD1 (ENSRROG00000041455) #8	ENSRROG00000041090	MPZL1 (ENSRROG00000030637)	ADCY10 (ENSRROG00000039680) #11	MPC2 (ENSRROG00000029785) #12	DCAF6 (ENSRROG00000041344) #13	GPR161 (ENSRROG00000040012) #15	TIPRL (ENSRROG00000028910)	SFT2D2 (ENSRROG00000040130) #17	TBX19 (ENSRROG00000002279) #18	ENSRROG00000037332 #20	ENSRROG00000028162 #20	DPT (ENSRROG00000039356) #21	ENSRROG00000022925	ATP1B1 (ENSRROG00000031682) #22
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	12	ENSNLEG00000029176	ENSNLEG00000032179	UBE2K (ENSNLEG00000017116)	PDS5A (ENSNLEG00000017121)	ENSNLEG00000029656	N4BP2 (ENSNLEG00000017133)	ENSNLEG00000030066	CHRNA9 (ENSNLEG00000017150)	RBM47 (ENSNLEG00000017151)	NSUN7 (ENSNLEG00000017157)	APBB2 (ENSNLEG00000017166)	UCHL1 (ENSNLEG00000034128)	LIMCH1 (ENSNLEG00000017187)	PHOX2B (ENSNLEG00000029231)	TMEM33 (ENSNLEG00000017242)	ENSNLEG00000035036 #22	SLC30A9 (ENSNLEG00000017245)	BEND4 (ENSNLEG00000017262)	ENSNLEG00000030271	ATP8A1 (ENSNLEG00000017266)	GRXCR1 (ENSNLEG00000017292)	KCTD8 (ENSNLEG00000031481)	YIPF7 (ENSNLEG00000017295)	GUF1 (ENSNLEG00000017299)	GNPDA2 (ENSNLEG00000017308)	GABRG1 (ENSNLEG00000017314)	GABRA2 (ENSNLEG00000017318)	COX7B2 (ENSNLEG00000030744)	GABRA4 (ENSNLEG00000017322)	GABRB1 (ENSNLEG00000017323)	ENSNLEG00000035223
Gibbon	MODERN SPECIES	2	RCSD1 (ENSNLEG00000014811) #8	ENSNLEG00000035645	MPZL1 (ENSNLEG00000014817)	ADCY10 (ENSNLEG00000014844) #11	MPC2 (ENSNLEG00000014889) #12	DCAF6 (ENSNLEG00000014824) #13	GPR161 (ENSNLEG00000014896) #15	TIPRL (ENSNLEG00000014903)	SFT2D2 (ENSNLEG00000014912) #17	TBX19 (ENSNLEG00000014917) #18	ENSNLEG00000032232	ENSNLEG00000032893	ENSNLEG00000034564 #20	ENSNLEG00000014932	DPT (ENSNLEG00000014925) #21	ATP1B1 (ENSNLEG00000014934) #22	NME7 (ENSNLEG00000014942) #23	BLZF1 (ENSNLEG00000014962) #24	CCDC181 (ENSNLEG00000014970) #25	SLC19A2 (ENSNLEG00000014974) #26	F5 (ENSNLEG00000014985) #27	SELP (ENSNLEG00000015004) #28	SELL (ENSNLEG00000034167) #29	SELE (ENSNLEG00000015020) #30	METTL18 (ENSNLEG00000015047) #31	C1orf112 (ENSNLEG00000015050) #32	SCYL3 (ENSNLEG00000015072) #33	KIFAP3 (ENSNLEG00000015085) #34	NTMT2 (ENSNLEG00000015113) #35	GORAB (ENSNLEG00000015118) #36	PRRX1 (ENSNLEG00000015124) #37
Hominidae	ANCESTRAL SPECIES	6	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Orangutan	MODERN SPECIES		CREG1 (ENSPPYG00000000550) #7	RCSD1 (ENSPPYG00000000549) #8	MPZL1 (ENSPPYG00000000548)	ADCY10 (ENSPPYG00000000547) #11	MPC2 (ENSPPYG00000000546) #12	DCAF6 (ENSPPYG00000000545) #13	GPR161 (ENSPPYG00000000544) #15	TIPRL (ENSPPYG00000000543)	SFT2D2 (ENSPPYG00000000541) #17	TBX19 (ENSPPYG00000000540) #18	ENSPPYG00000035525	ENSPPYG00000000539 #20	ENSPPYG00000000538 #20	DPT (ENSPPYG00000000537) #21	ENSPPYG00000014387	ATP1B1 (ENSPPYG00000000536) #22	NME7 (ENSPPYG00000000535) #23	BLZF1 (ENSPPYG00000000534) #24	CCDC181 (ENSPPYG00000000533) #25	SLC19A2 (ENSPPYG00000000532) #26	F5 (ENSPPYG00000000531) #27	SELP (ENSPPYG00000000530) #28	SELL (ENSPPYG00000000529) #29	SELE (ENSPPYG00000000528) #30	METTL18 (ENSPPYG00000000527) #31	C1orf112 (ENSPPYG00000000526) #32	SCYL3 (ENSPPYG00000000525) #33	KIFAP3 (ENSPPYG00000000524) #34	NTMT2 (ENSPPYG00000000523) #35	GORAB (ENSPPYG00000000522) #36	PRRX1 (ENSPPYG00000036753) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT01030000234556.a.b.a	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.j #20	ENSGT01100000263557.A.b.b.i #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886.a #36	ENSGT00940000159466 #37
Gorilla	MODERN SPECIES		MPZL1 (ENSGGOG00000040368)	ENSGGOG00000040195	ENSGGOG00000044114	ADCY10 (ENSGGOG00000009856) #11	MPC2 (ENSGGOG00000027565) #12	DCAF6 (ENSGGOG00000028357) #13	GPR161 (ENSGGOG00000012683) #15	TIPRL (ENSGGOG00000012994)	SFT2D2 (ENSGGOG00000023890) #17	TBX19 (ENSGGOG00000001338) #18	ENSGGOG00000036517	QRSL1 (ENSGGOG00000036326)	ENSGGOG00000002598 #20	ENSGGOG00000037002 #20	DPT (ENSGGOG00000003563) #21	ATP1B1 (ENSGGOG00000002499) #22	NME7 (ENSGGOG00000002502) #23	BLZF1 (ENSGGOG00000034839) #24	CCDC181 (ENSGGOG00000026920) #25	SLC19A2 (ENSGGOG00000025385) #26	F5 (ENSGGOG00000010691) #27	SELP (ENSGGOG00000000935) #28	SELL (ENSGGOG00000024661) #29	SELE (ENSGGOG00000005841) #30	METTL18 (ENSGGOG00000015904) #31	C1orf112 (ENSGGOG00000016160) #32	SCYL3 (ENSGGOG00000011643) #33	KIFAP3 (ENSGGOG00000025510) #34	NTMT2 (ENSGGOG00000011748) #35	ENSGGOG00000044050 #36	PRRX1 (ENSGGOG00000010196) #37
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT01030000234556.a.b.a	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.j #20	ENSGT01100000263557.A.b.b.i #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886.a #36	ENSGT00940000159466 #37
Pan	ANCESTRAL SPECIES		ENSGT01030000234556.a.b.a.y	ENSGT00910000147687	ENSGT00910000146993	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000015360.i.b	ENSGT00550000074866.j	ENSGT01100000263557.A.b.b.j #20	ENSGT01100000263557.A.b.b.i #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886.a #36	ENSGT00940000159466 #37
Chimpanzee	MODERN SPECIES		RCSD1 (ENSPTRG00000023609) #8	MPZL1 (ENSPTRG00000052515)	ENSPTRG00000048617	ADCY10 (ENSPTRG00000001638) #11	MPC2 (ENSPTRG00000001640) #12	DCAF6 (ENSPTRG00000001641) #13	ENSPTRG00000047288 #15	TIPRL (ENSPTRG00000001644)	SFT2D2 (ENSPTRG00000034187) #17	TBX19 (ENSPTRG00000042723) #18	ENSPTRG00000048861	ENSPTRG00000044413	ENSPTRG00000043019 #20	ENSPTRG00000044293 #20	DPT (ENSPTRG00000001651) #21	ATP1B1 (ENSPTRG00000001653) #22	NME7 (ENSPTRG00000001655) #23	BLZF1 (ENSPTRG00000001656) #24	CCDC181 (ENSPTRG00000001657) #25	SLC19A2 (ENSPTRG00000001658) #26	F5 (ENSPTRG00000001659) #27	SELP (ENSPTRG00000001660) #28	SELL (ENSPTRG00000001661) #29	SELE (ENSPTRG00000001662) #30	METTL18 (ENSPTRG00000001663) #31	C1H1orf112 (ENSPTRG00000001664) #32	ENSPTRG00000052083 #32	SCYL3 (ENSPTRG00000001665) #33	KIFAP3 (ENSPTRG00000001666) #34	NTMT2 (ENSPTRG00000030294) #35	GORAB (ENSPTRG00000001667) #36
Bonobo	MODERN SPECIES		ENSPPAG00000033429	ENSPPAG00000027493	ENSPPAG00000029835	ADCY10 (ENSPPAG00000033602) #11	MPC2 (ENSPPAG00000032455) #12	DCAF6 (ENSPPAG00000028233) #13	GPR161 (ENSPPAG00000029093) #15	TIPRL (ENSPPAG00000040225)	SFT2D2 (ENSPPAG00000029125) #17	TBX19 (ENSPPAG00000032131) #18	ENSPPAG00000039099	ENSPPAG00000032728	ENSPPAG00000038938 #20	ENSPPAG00000043037 #20	DPT (ENSPPAG00000014655) #21	ATP1B1 (ENSPPAG00000036327) #22	NME7 (ENSPPAG00000040110) #23	BLZF1 (ENSPPAG00000033211) #24	CCDC181 (ENSPPAG00000028612) #25	SLC19A2 (ENSPPAG00000043910) #26	F5 (ENSPPAG00000037858) #27	SELP (ENSPPAG00000033608) #28	SELL (ENSPPAG00000032392) #29	SELE (ENSPPAG00000040853) #30	METTL18 (ENSPPAG00000025508) #31	C1orf112 (ENSPPAG00000031085) #32	SCYL3 (ENSPPAG00000039281) #33	KIFAP3 (ENSPPAG00000028901) #34	NTMT2 (ENSPPAG00000027290) #35	GORAB (ENSPPAG00000027813) #36	PRRX1 (ENSPPAG00000031154) #37
Human	MODERN SPECIES		POU2F1 (ENSG00000143190)	CD247 (ENSG00000198821)	CREG1 (ENSG00000143162) #7	RCSD1 (ENSG00000198771) #8	MPZL1 (ENSG00000197965)	ADCY10 (ENSG00000143199) #11	MPC2 (ENSG00000143158) #12	DCAF6 (ENSG00000143164) #13	GPR161 (ENSG00000143147) #15	TIPRL (ENSG00000143155)	SFT2D2 (ENSG00000213064) #17	TBX19 (ENSG00000143178) #18	XCL2 (ENSG00000143185) #20	XCL1 (ENSG00000143184) #20	DPT (ENSG00000143196) #21	ATP1B1 (ENSG00000143153) #22	NME7 (ENSG00000143156) #23	BLZF1 (ENSG00000117475) #24	CCDC181 (ENSG00000117477) #25	SLC19A2 (ENSG00000117479) #26	F5 (ENSG00000198734) #27	SELP (ENSG00000174175) #28	C1orf112 (ENSG00000000460) #32	SELL (ENSG00000188404) #29	SELE (ENSG00000007908) #30	METTL18 (ENSG00000171806) #31	SCYL3 (ENSG00000000457) #33	KIFAP3 (ENSG00000075945) #34	NTMT2 (ENSG00000203740) #35	GORAB (ENSG00000120370) #36	PRRX1 (ENSG00000116132) #37
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.i #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Lemuriformes	ANCESTRAL SPECIES	11	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.i #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Mouse lemur	MODERN SPECIES	11	STYXL2 (ENSMICG00000048069)	POU2F1 (ENSMICG00000011644)	CD247 (ENSMICG00000032743)	CREG1 (ENSMICG00000011657) #7	RCSD1 (ENSMICG00000026736) #8	MPZL1 (ENSMICG00000011660)	ADCY10 (ENSMICG00000011665) #11	MPC2 (ENSMICG00000044989) #12	DCAF6 (ENSMICG00000011699) #13	GPR161 (ENSMICG00000011715) #15	ENSMICG00000007808	SFT2D2 (ENSMICG00000028528) #17	TBX19 (ENSMICG00000007817) #18	ENSMICG00000042806 #20	DPT (ENSMICG00000013173) #21	ATP1B1 (ENSMICG00000013186) #22	NME7 (ENSMICG00000013198) #23	ENSMICG00000044788 #24	CCDC181 (ENSMICG00000012243) #25	SLC19A2 (ENSMICG00000012252) #26	F5 (ENSMICG00000012264) #27	SELP (ENSMICG00000012288) #28	SELL (ENSMICG00000012303) #29	SELE (ENSMICG00000012315) #30	C1orf112 (ENSMICG00000012330) #32	SCYL3 (ENSMICG00000012358) #33	KIFAP3 (ENSMICG00000012379) #34	NTMT2 (ENSMICG00000029538) #35	GORAB (ENSMICG00000033096) #36	PRRX1 (ENSMICG00000017097) #37	MROH9 (ENSMICG00000017099)
Lemuriformes_a	ANCESTRAL SPECIES	74	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.i #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Greater bamboo lemur	MODERN SPECIES	227	TLR7 (ENSPSMG00000025720)	PRPS2 (ENSPSMG00000025716)	FRMPD4 (ENSPSMG00000025692)	ENSPSMG00000025684	HSDL2 (ENSPSMG00000025682)	KIAA1958 (ENSPSMG00000025674)	INIP (ENSPSMG00000025668)	ENSPSMG00000025662	SNX30 (ENSPSMG00000025660)	SLC46A2 (ENSPSMG00000025656)	ENSPSMG00000025650	ENSPSMG00000025645	ZFP37 (ENSPSMG00000025642)	SLC31A2 (ENSPSMG00000025641)	FKBP15 (ENSPSMG00000025640)	ATP1B1 (ENSPSMG00000025620) #22	NME7 (ENSPSMG00000025617) #23	BLZF1 (ENSPSMG00000025609) #24	CCDC181 (ENSPSMG00000025603) #25	SLC19A2 (ENSPSMG00000025598) #26	F5 (ENSPSMG00000025591) #27	SELP (ENSPSMG00000025582) #28	SELL (ENSPSMG00000025575) #29	SELE (ENSPSMG00000025573) #30	METTL18 (ENSPSMG00000025570) #31	C1orf112 (ENSPSMG00000025568) #32	SCYL3 (ENSPSMG00000025561) #33	KIFAP3 (ENSPSMG00000025554) #34	NTMT2 (ENSPSMG00000025523) #35	ENSPSMG00000025520	GORAB (ENSPSMG00000025519) #36
Coquerels sifaka	MODERN SPECIES	718	POU2F1 (ENSPCOG00000000741)	CD247 (ENSPCOG00000019960)	CREG1 (ENSPCOG00000016537) #7	RCSD1 (ENSPCOG00000009112) #8	MPZL1 (ENSPCOG00000021813)	ADCY10 (ENSPCOG00000015867) #11	ENSPCOG00000015254 #12	DCAF6 (ENSPCOG00000016540) #13	GPR161 (ENSPCOG00000023583) #15	TIPRL (ENSPCOG00000013020)	SFT2D2 (ENSPCOG00000025756) #17	TBX19 (ENSPCOG00000028024) #18	ENSPCOG00000019192	ENSPCOG00000023040 #20	DPT (ENSPCOG00000024322) #21	ATP1B1 (ENSPCOG00000017666) #22	NME7 (ENSPCOG00000028279) #23	BLZF1 (ENSPCOG00000028754) #24	CCDC181 (ENSPCOG00000015172) #25	SLC19A2 (ENSPCOG00000023865) #26	F5 (ENSPCOG00000018129) #27	SELP (ENSPCOG00000007809) #28	SELL (ENSPCOG00000010365) #29	SELE (ENSPCOG00000015034) #30	ENSPCOG00000016958 #32	ENSPCOG00000021309 #32	SCYL3 (ENSPCOG00000028841) #33	KIFAP3 (ENSPCOG00000004619) #34	NTMT2 (ENSPCOG00000015498) #35	GORAB (ENSPCOG00000024051) #36	PRRX1 (ENSPCOG00000014632) #37
Bushbaby	MODERN SPECIES	131	POU2F1 (ENSOGAG00000005069)	CD247 (ENSOGAG00000029232)	CREG1 (ENSOGAG00000005362) #7	RCSD1 (ENSOGAG00000005364) #8	MPZL1 (ENSOGAG00000031931)	ADCY10 (ENSOGAG00000032805) #11	MPC2 (ENSOGAG00000003130) #12	DCAF6 (ENSOGAG00000003131) #13	GPR161 (ENSOGAG00000003135) #15	TIPRL (ENSOGAG00000004456)	ENSOGAG00000028903	SFT2D2 (ENSOGAG00000032562) #17	TBX19 (ENSOGAG00000004458) #18	ENSOGAG00000011103 #20	DPT (ENSOGAG00000009625) #21	ATP1B1 (ENSOGAG00000010046) #22	NME7 (ENSOGAG00000010051) #23	BLZF1 (ENSOGAG00000010058) #24	CCDC181 (ENSOGAG00000029896) #25	SLC19A2 (ENSOGAG00000010060) #26	ENSOGAG00000010063 #27	SELP (ENSOGAG00000010076) #28	SELL (ENSOGAG00000010080) #29	SELE (ENSOGAG00000010089) #30	METTL18 (ENSOGAG00000010096) #31	C1orf112 (ENSOGAG00000010101) #32	SCYL3 (ENSOGAG00000010109) #33	KIFAP3 (ENSOGAG00000010111) #34	NTMT2 (ENSOGAG00000002539) #35	GORAB (ENSOGAG00000012584) #36	PRRX1 (ENSOGAG00000012582) #37
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Carnivora	ANCESTRAL SPECIES	14	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Felidae	ANCESTRAL SPECIES	11	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Panthera	ANCESTRAL SPECIES	19	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Tiger	MODERN SPECIES	95	STYXL2 (ENSPTIG00000014463)	POU2F1 (ENSPTIG00000016843)	CD247 (ENSPTIG00000019135)	CREG1 (ENSPTIG00000021373) #7	RCSD1 (ENSPTIG00000001566) #8	MPZL1 (ENSPTIG00000006739)	ADCY10 (ENSPTIG00000008979) #11	MPC2 (ENSPTIG00000012621) #12	DCAF6 (ENSPTIG00000014604) #13	GPR161 (ENSPTIG00000020608) #15	TIPRL (ENSPTIG00000021813)	SFT2D2 (ENSPTIG00000022001) #17	TBX19 (ENSPTIG00000003931) #18	ENSPTIG00000006878 #20	DPT (ENSPTIG00000007521) #21	ATP1B1 (ENSPTIG00000008397) #22	NME7 (ENSPTIG00000010167) #23	BLZF1 (ENSPTIG00000012889) #24	CCDC181 (ENSPTIG00000013879) #25	SLC19A2 (ENSPTIG00000015219) #26	F5 (ENSPTIG00000016292) #27	SELP (ENSPTIG00000000157) #28	SELL (ENSPTIG00000001143) #29	SELE (ENSPTIG00000008666) #30	C1orf112 (ENSPTIG00000016500) #32	SCYL3 (ENSPTIG00000002143) #33	KIFAP3 (ENSPTIG00000005955) #34	NTMT2 (ENSPTIG00000009605) #35
Panthera_a	ANCESTRAL SPECIES	19	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
lion	MODERN SPECIES	17	ENSPLOG00000011227	ENSPLOG00000011295	POU2F1 (ENSPLOG00000011331)	CD247 (ENSPLOG00000011486)	CREG1 (ENSPLOG00000011524) #7	RCSD1 (ENSPLOG00000011549) #8	MPZL1 (ENSPLOG00000011676)	ADCY10 (ENSPLOG00000011830) #11	MPC2 (ENSPLOG00000011883) #12	DCAF6 (ENSPLOG00000012072) #13	GPR161 (ENSPLOG00000013371) #15	TIPRL (ENSPLOG00000013635)	SFT2D2 (ENSPLOG00000013744) #17	TBX19 (ENSPLOG00000013816) #18	DPT (ENSPLOG00000013899) #21	ATP1B1 (ENSPLOG00000013961) #22	NME7 (ENSPLOG00000014006) #23	ENSPLOG00000014130 #24	CCDC181 (ENSPLOG00000014205) #25	SLC19A2 (ENSPLOG00000014330) #26	F5 (ENSPLOG00000014456) #27	SELP (ENSPLOG00000014733) #28	SELL (ENSPLOG00000015193) #29	SELE (ENSPLOG00000015333) #30	METTL18 (ENSPLOG00000015827) #31	C1orf112 (ENSPLOG00000015865) #32	SCYL3 (ENSPLOG00000015972) #33	KIFAP3 (ENSPLOG00000016069) #34	NTMT2 (ENSPLOG00000016399) #35	GORAB (ENSPLOG00000016505) #36	PRRX1 (ENSPLOG00000016656) #37
leopard	MODERN SPECIES	4	STYXL2 (ENSPPRG00000000420)	POU2F1 (ENSPPRG00000000216)	CD247 (ENSPPRG00000023277)	CREG1 (ENSPPRG00000019626) #7	RCSD1 (ENSPPRG00000017716) #8	MPZL1 (ENSPPRG00000015560)	ADCY10 (ENSPPRG00000013005) #11	MPC2 (ENSPPRG00000009574) #12	DCAF6 (ENSPPRG00000008789) #13	GPR161 (ENSPPRG00000003308) #15	TIPRL (ENSPPRG00000001883)	SFT2D2 (ENSPPRG00000001530) #17	TBX19 (ENSPPRG00000000719) #18	ENSPPRG00000000315 #20	DPT (ENSPPRG00000022606) #21	ATP1B1 (ENSPPRG00000022684) #22	NME7 (ENSPPRG00000023098) #23	BLZF1 (ENSPPRG00000024249) #24	CCDC181 (ENSPPRG00000022585) #25	SLC19A2 (ENSPPRG00000016714) #26	ENSPPRG00000013883	F5 (ENSPPRG00000013583) #27	SELP (ENSPPRG00000010498) #28	SELL (ENSPPRG00000007593) #29	SELE (ENSPPRG00000007257) #30	C1orf112 (ENSPPRG00000003462) #32	SCYL3 (ENSPPRG00000022607) #33	KIFAP3 (ENSPPRG00000023364) #34	NTMT2 (ENSPPRG00000024292) #35	GORAB (ENSPPRG00000024403) #36	PRRX1 (ENSPPRG00000020823) #37
Cat	MODERN SPECIES	248	STYXL2 (ENSFCAG00000001052)	POU2F1 (ENSFCAG00000028985)	CD247 (ENSFCAG00000026224)	CREG1 (ENSFCAG00000026035) #7	RCSD1 (ENSFCAG00000022634) #8	MPZL1 (ENSFCAG00000024227)	ADCY10 (ENSFCAG00000015043) #11	MPC2 (ENSFCAG00000046333) #12	DCAF6 (ENSFCAG00000015044) #13	GPR161 (ENSFCAG00000015045) #15	TIPRL (ENSFCAG00000033381)	SFT2D2 (ENSFCAG00000040027) #17	TBX19 (ENSFCAG00000015047) #18	ENSFCAG00000029190 #20	DPT (ENSFCAG00000022536) #21	ATP1B1 (ENSFCAG00000009332) #22	NME7 (ENSFCAG00000009334) #23	BLZF1 (ENSFCAG00000012530) #24	CCDC181 (ENSFCAG00000007710) #25	SLC19A2 (ENSFCAG00000007711) #26	F5 (ENSFCAG00000008147) #27	SELP (ENSFCAG00000008148) #28	SELL (ENSFCAG00000008149) #29	SELE (ENSFCAG00000035810) #30	METTL18 (ENSFCAG00000008151) #31	CF1H1orf112 (ENSFCAG00000008152) #32	SCYL3 (ENSFCAG00000008153) #33	KIFAP3 (ENSFCAG00000000812) #34	NTMT2 (ENSFCAG00000023165) #35	GORAB (ENSFCAG00000027419) #36	PRRX1 (ENSFCAG00000025024) #37
Caniformia	ANCESTRAL SPECIES	10	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000007640.a.b.b	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Dog	MODERN SPECIES	35	ILDR2 (ENSCAFG00845003741)	MAEL (ENSCAFG00845003655)	GPA33 (ENSCAFG00845003633)	STYXL2 (ENSCAFG00845003580)	POU2F1 (ENSCAFG00845003507)	CD247 (ENSCAFG00845003466)	CREG1 (ENSCAFG00845003446) #7	RCSD1 (ENSCAFG00845003387) #8	MPZL1 (ENSCAFG00845003331)	ADCY10 (ENSCAFG00845003255) #11	ENSCAFG00845003221 #12	DCAF6 (ENSCAFG00845003001) #13	GPR161 (ENSCAFG00845002814) #15	TBX19 (ENSCAFG00845002647) #18	DPT (ENSCAFG00845002540) #21	ATP1B1 (ENSCAFG00845002526) #22	NME7 (ENSCAFG00845002507) #23	BLZF1 (ENSCAFG00845002482) #24	CCDC181 (ENSCAFG00845002455) #25	SLC19A2 (ENSCAFG00845002427) #26	F5 (ENSCAFG00845002341) #27	SELP (ENSCAFG00845002229) #28	SELL (ENSCAFG00845002153) #29	SELE (ENSCAFG00845002098) #30	ENSCAFG00845002058	METTL18 (ENSCAFG00845002040) #31	C7H1orf112 (ENSCAFG00845002005) #32	SCYL3 (ENSCAFG00845001874) #33	KIFAP3 (ENSCAFG00845001773) #34	METTL11B (ENSCAFG00845001718) #35	GORAB (ENSCAFG00845001687) #36
Dingo	MODERN SPECIES	271	POU2F1 (ENSCAFG00020022783)	ENSCAFG00020022762	CREG1 (ENSCAFG00020022760) #7	RCSD1 (ENSCAFG00020022747) #8	MPZL1 (ENSCAFG00020022739)	ADCY10 (ENSCAFG00020022725) #11	MPC2 (ENSCAFG00020022724) #12	DCAF6 (ENSCAFG00020022722) #13	GPR161 (ENSCAFG00020022721) #15	TIPRL (ENSCAFG00020022720)	ENSCAFG00020022718	SFT2D2 (ENSCAFG00020022715) #17	TBX19 (ENSCAFG00020022712) #18	ENSCAFG00020022710 #20	DPT (ENSCAFG00020022709) #21	ATP1B1 (ENSCAFG00020022706) #22	BLZF1 (ENSCAFG00020022702) #24	CCDC181 (ENSCAFG00020022700) #25	SLC19A2 (ENSCAFG00020022694) #26	F5 (ENSCAFG00020022678) #27	SELP (ENSCAFG00020022676) #28	SELL (ENSCAFG00020022674) #29	SELE (ENSCAFG00020022673) #30	ENSCAFG00020022669	METTL18 (ENSCAFG00020022668) #31	C1orf112 (ENSCAFG00020022649) #32	SCYL3 (ENSCAFG00020022638) #33	KIFAP3 (ENSCAFG00020022130) #34	NTMT2 (ENSCAFG00020022104) #35	GORAB (ENSCAFG00020022098) #36	PRRX1 (ENSCAFG00020022095) #37
Red fox	MODERN SPECIES	45	DUSP27 (ENSVVUG00000026335)	POU2F1 (ENSVVUG00000026314)	CD247 (ENSVVUG00000026307)	CREG1 (ENSVVUG00000026302) #7	RCSD1 (ENSVVUG00000026278) #8	MPZL1 (ENSVVUG00000026277)	ADCY10 (ENSVVUG00000026275) #11	MPC2 (ENSVVUG00000026274) #12	DCAF6 (ENSVVUG00000026268) #13	GPR161 (ENSVVUG00000026266) #15	ENSVVUG00000026265	TIPRL (ENSVVUG00000026263)	TBX19 (ENSVVUG00000026259) #18	ENSVVUG00000026258 #20	DPT (ENSVVUG00000026254) #21	ATP1B1 (ENSVVUG00000026248) #22	NME7 (ENSVVUG00000026230) #23	BLZF1 (ENSVVUG00000026222) #24	CCDC181 (ENSVVUG00000026220) #25	SLC19A2 (ENSVVUG00000026219) #26	F5 (ENSVVUG00000026215) #27	SELP (ENSVVUG00000026212) #28	SELL (ENSVVUG00000026210) #29	SELE (ENSVVUG00000026208) #30	METTL18 (ENSVVUG00000026205) #31	CUNH1orf112 (ENSVVUG00000026202) #32	SCYL3 (ENSVVUG00000026198) #33	KIFAP3 (ENSVVUG00000025256) #34	ENSVVUG00000025193	METTL11B (ENSVVUG00000025190) #35	GORAB (ENSVVUG00000025184) #36
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.ab #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Mustelinae	ANCESTRAL SPECIES	182					ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22
American mink	MODERN SPECIES	15																ATP1B1 (ENSNVIG00000021977) #22	ENSNVIG00000021996	TNS1 (ENSNVIG00000022009)	RUFY4 (ENSNVIG00000022206)	ENSNVIG00000022212	ENSNVIG00000022215	ENSNVIG00000022218	ARPC2 (ENSNVIG00000022239)	GPBAR1 (ENSNVIG00000022265)	AAMP (ENSNVIG00000022272)	PNKD (ENSNVIG00000022286)	ENSNVIG00000022304	ENSNVIG00000022310	CATIP (ENSNVIG00000022315)	SLC11A1 (ENSNVIG00000022328)	CTDS1 (ENSNVIG00000022342)
Ferret	MODERN SPECIES	460		RCSD1 (ENSMPUG00000000559) #8	MPZL1 (ENSMPUG00000000550)	ADCY10 (ENSMPUG00000000543) #11	DCAF6 (ENSMPUG00000000538) #13	GPR161 (ENSMPUG00000000536) #15	TIPRL (ENSMPUG00000000533)	SFT2D2 (ENSMPUG00000000531) #17	TBX19 (ENSMPUG00000000522) #18	ENSMPUG00000000519	ENSMPUG00000000517 #20	ENSMPUG00000000514	ENSMPUG00000000513	ENSMPUG00000000511	DPT (ENSMPUG00000000509) #21	ATP1B1 (ENSMPUG00000000508) #22
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT01030000234579.C.c #22
Giant Panda	MODERN SPECIES	929																ENSAMEG00000025785 #22
Ursidae	ANCESTRAL SPECIES	4	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.ab #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760.l #21	ENSGT01030000234579.C.d #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.j #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Ursus	ANCESTRAL SPECIES	65	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a.k #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.ab #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760.l #21	ENSGT01030000234579.C.d #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.j #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168.g #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Polar bear	MODERN SPECIES	99	ENSUMAG00000016586	ENSUMAG00000016589	CD247 (ENSUMAG00000016591)	ENSUMAG00000016593 #7	RCSD1 (ENSUMAG00000016595) #8	MPZL1 (ENSUMAG00000016599)	ADCY10 (ENSUMAG00000016616) #11	MPC2 (ENSUMAG00000016657) #12	DCAF6 (ENSUMAG00000016710) #13	GPR161 (ENSUMAG00000017324) #15	TIPRL (ENSUMAG00000017332)	SFT2D2 (ENSUMAG00000017335) #17	TBX19 (ENSUMAG00000017347) #18	ENSUMAG00000017370 #20	DPT (ENSUMAG00000017380) #21	ATP1B1 (ENSUMAG00000017397) #22	NME7 (ENSUMAG00000017416) #23	BLZF1 (ENSUMAG00000017430) #24	CCDC181 (ENSUMAG00000017435) #25	SLC19A2 (ENSUMAG00000017441) #26	F5 (ENSUMAG00000017484) #27	SELP (ENSUMAG00000017624) #28	SELL (ENSUMAG00000017637) #29	SELE (ENSUMAG00000017643) #30	METTL18 (ENSUMAG00000017650) #31	C1orf112 (ENSUMAG00000017651) #32	SCYL3 (ENSUMAG00000017660) #33	KIFAP3 (ENSUMAG00000017673) #34	NTMT2 (ENSUMAG00000017682) #35	GORAB (ENSUMAG00000017687) #36	PRRX1 (ENSUMAG00000017715) #37
American black bear	MODERN SPECIES	1807																ATP1B1 (ENSUAMG00000023827) #22
Giant Panda	MODERN SPECIES	18	GPA33 (ENSAMEG00000000019)	STYXL2 (ENSAMEG00000000020)	POU2F1 (ENSAMEG00000000021)	CD247 (ENSAMEG00000000022)	CREG1 (ENSAMEG00000030316) #7	RCSD1 (ENSAMEG00000006253) #8	MPZL1 (ENSAMEG00000006264)	ADCY10 (ENSAMEG00000025814) #11	MPC2 (ENSAMEG00000006273) #12	DCAF6 (ENSAMEG00000006284) #13	GPR161 (ENSAMEG00000006340) #15	TIPRL (ENSAMEG00000015479)	TBX19 (ENSAMEG00000004326) #18	ENSAMEG00000029912 #20	DPT (ENSAMEG00000024315) #21	ENSAMEG00000011522 #22	NME7 (ENSAMEG00000011496) #23	BLZF1 (ENSAMEG00000011473) #24	CCDC181 (ENSAMEG00000011462) #25	SLC19A2 (ENSAMEG00000011458) #26	F5 (ENSAMEG00000011403) #27	SELP (ENSAMEG00000011331) #28	SELL (ENSAMEG00000011311) #29	SELE (ENSAMEG00000011258) #30	METTL18 (ENSAMEG00000019804) #31	ENSAMEG00000011204 #32	SCYL3 (ENSAMEG00000011180) #33	KIFAP3 (ENSAMEG00000011131) #34	NTMT2 (ENSAMEG00000011123) #35	GORAB (ENSAMEG00000011116) #36	PRRX1 (ENSAMEG00000011111) #37
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Equus	ANCESTRAL SPECIES	33	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT01100000264276.b	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Donkey	MODERN SPECIES	17	POU2F1 (ENSEASG00005019117)	CD247 (ENSEASG00005035466)	CREG1 (ENSEASG00005019111) #7	RCSD1 (ENSEASG00005019108) #8	MPZL1 (ENSEASG00005031733)	ADCY10 (ENSEASG00005019097) #11	ENSEASG00005019094 #12	DCAF6 (ENSEASG00005019085) #13	GPR161 (ENSEASG00005019072) #15	TIPRL (ENSEASG00005019065)	SFT2D2 (ENSEASG00005019061) #17	TBX19 (ENSEASG00005019056) #18	ENSEASG00005033904 #20	ENSEASG00005032236	DPT (ENSEASG00005019049) #21	ATP1B1 (ENSEASG00005019047) #22	NME7 (ENSEASG00005019045) #23	BLZF1 (ENSEASG00005019044) #24	CCDC181 (ENSEASG00005019043) #25	SLC19A2 (ENSEASG00005019041) #26	F5 (ENSEASG00005019035) #27	SELP (ENSEASG00005019024) #28	SELL (ENSEASG00005019020) #29	ENSEASG00005019018 #30	METTL18 (ENSEASG00005019014) #31	ENSEASG00005019006 #32	SCYL3 (ENSEASG00005018993) #33	KIFAP3 (ENSEASG00005018987) #34	NTMT2 (ENSEASG00005032963) #35	GORAB (ENSEASG00005024298) #36	PRRX1 (ENSEASG00005018979) #37
Horse	MODERN SPECIES	26	STYXL2 (ENSECAG00000000783)	POU2F1 (ENSECAG00000009395)	CD247 (ENSECAG00000020158)	CREG1 (ENSECAG00000024138) #7	RCSD1 (ENSECAG00000003124) #8	MPZL1 (ENSECAG00000006964)	ADCY10 (ENSECAG00000011724) #11	DCAF6 (ENSECAG00000000413) #13	GPR161 (ENSECAG00000019931) #15	TIPRL (ENSECAG00000021650)	SFT2D2 (ENSECAG00000022471) #17	TBX19 (ENSECAG00000039279) #18	ENSECAG00000013872 #20	ENSECAG00000057868	DPT (ENSECAG00000016101) #21	ATP1B1 (ENSECAG00000017771) #22	NME7 (ENSECAG00000011690) #23	BLZF1 (ENSECAG00000017383) #24	CCDC181 (ENSECAG00000008361) #25	SLC19A2 (ENSECAG00000015797) #26	F5 (ENSECAG00000006860) #27	SELP (ENSECAG00000010918) #28	SELL (ENSECAG00000020122) #29	SELE (ENSECAG00000008423) #30	ENSECAG00000038742	METTL18 (ENSECAG00000006141) #31	C5H1orf112 (ENSECAG00000008931) #32	SCYL3 (ENSECAG00000022282) #33	KIFAP3 (ENSECAG00000002798) #34	NTMT2 (ENSECAG00000003997) #35	GORAB (ENSECAG00000007221) #36
Chiroptera	ANCESTRAL SPECIES	22	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00940000165676	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Megabat	MODERN SPECIES	1032																ATP1B1 (ENSPVAG00000007351) #22	NME7 (ENSPVAG00000007352) #23	BLZF1 (ENSPVAG00000007355) #24	CCDC181 (ENSPVAG00000007356) #25	SLC19A2 (ENSPVAG00000007358) #26	F5 (ENSPVAG00000007359) #27	SELP (ENSPVAG00000007361) #28	SELL (ENSPVAG00000007362) #29	SELE (ENSPVAG00000007363) #30
Microchiroptera	ANCESTRAL SPECIES	22	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00940000165676	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Microbat	MODERN SPECIES	1216		STYXL2 (ENSMLUG00000030263)	POU2F1 (ENSMLUG00000015231)	CD247 (ENSMLUG00000024275)	CREG1 (ENSMLUG00000025293) #7	ENSMLUG00000028738 #8	ENSMLUG00000014133	ADCY10 (ENSMLUG00000011829) #11	MPC2 (ENSMLUG00000011873) #12	DCAF6 (ENSMLUG00000011880) #13	GPR161 (ENSMLUG00000011902) #15	TIPRL (ENSMLUG00000011927)	SFT2D2 (ENSMLUG00000030658) #17	ENSMLUG00000011950 #20	DPT (ENSMLUG00000030698) #21	ATP1B1 (ENSMLUG00000010015) #22	NME7 (ENSMLUG00000010032) #23	BLZF1 (ENSMLUG00000010060) #24	CCDC181 (ENSMLUG00000007713) #25	SLC19A2 (ENSMLUG00000010084) #26	F5 (ENSMLUG00000008473) #27	SELP (ENSMLUG00000008526) #28	SELL (ENSMLUG00000008558) #29	SELE (ENSMLUG00000008593) #30	BCL9 (ENSMLUG00000000317)	ACP6 (ENSMLUG00000000321)	GJA8 (ENSMLUG00000029440)
Greater horseshoe bat	MODERN SPECIES	14	ENSRFEG00010018402	ENSRFEG00010018449	CD247 (ENSRFEG00010018481)	CREG1 (ENSRFEG00010018544) #7	RCSD1 (ENSRFEG00010018588) #8	ENSRFEG00010018662	ADCY10 (ENSRFEG00010018785) #11	MPC2 (ENSRFEG00010019264) #12	DCAF6 (ENSRFEG00010019445) #13	GPR161 (ENSRFEG00010020454) #15	TIPRL (ENSRFEG00010020574)	SFT2D2 (ENSRFEG00010020611) #17	TBX19 (ENSRFEG00010020654) #18	ENSRFEG00010020698	DPT (ENSRFEG00010020722) #21	ATP1B1 (ENSRFEG00010020747) #22	NME7 (ENSRFEG00010020775) #23	BLZF1 (ENSRFEG00010020803) #24	CCDC181 (ENSRFEG00010020832) #25	SLC19A2 (ENSRFEG00010020858) #26	F5 (ENSRFEG00010020894) #27	SELP (ENSRFEG00010020919) #28	SELL (ENSRFEG00010020948) #29	SELE (ENSRFEG00010021038) #30	C1orf112 (ENSRFEG00010021229) #32	METTL18 (ENSRFEG00010021280) #31	SCYL3 (ENSRFEG00010021291) #33	KIFAP3 (ENSRFEG00010021316) #34	NTMT2 (ENSRFEG00010021368) #35	GORAB (ENSRFEG00010021378) #36	PRRX1 (ENSRFEG00010021399) #37
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Suina	ANCESTRAL SPECIES	8	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00990000213309	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Chacoan peccary	MODERN SPECIES	832																ATP1B1 (ENSCWAG00000016147) #22	NME7 (ENSCWAG00000016098) #23	BLZF1 (ENSCWAG00000016065) #24	CCDC181 (ENSCWAG00000016010) #25	SLC19A2 (ENSCWAG00000015928) #26	F5 (ENSCWAG00000015799) #27	SELP (ENSCWAG00000015691) #28	SELL (ENSCWAG00000015551) #29	SELE (ENSCWAG00000015466) #30	ENSCWAG00000015426	METTL18 (ENSCWAG00000015401) #31	C1orf112 (ENSCWAG00000015365) #32	SCYL3 (ENSCWAG00000015287) #33	KIFAP3 (ENSCWAG00000015031) #34	NTMT2 (ENSCWAG00000014967) #35	ENSCWAG00000014952
Pig	MODERN SPECIES	12	POU2F1 (ENSSSCG00000006310)	CD247 (ENSSSCG00000006309)	CREG1 (ENSSSCG00000006308) #7	RCSD1 (ENSSSCG00000006307) #8	MPZL1 (ENSSSCG00000006306)	ADCY10 (ENSSSCG00000006305) #11	MPC2 (ENSSSCG00000006304) #12	DCAF6 (ENSSSCG00000006303) #13	GPR161 (ENSSSCG00000006302) #15	TIPRL (ENSSSCG00000006301)	SFT2D2 (ENSSSCG00000031617) #17	TBX19 (ENSSSCG00000006299) #18	ENSSSCG00000044238	XCL1 (ENSSSCG00000006298) #20	DPT (ENSSSCG00000035937) #21	ATP1B1 (ENSSSCG00000006296) #22	NME7 (ENSSSCG00000006294) #23	BLZF1 (ENSSSCG00000022396) #24	CCDC181 (ENSSSCG00000028804) #25	SLC19A2 (ENSSSCG00000006290) #26	F5 (ENSSSCG00000006289) #27	SELP (ENSSSCG00000006288) #28	SELL (ENSSSCG00000006287) #29	ENSSSCG00000006286 #30	ENSSSCG00000034809	ENSSSCG00000030960 #30	ENSSSCG00000031622	METTL18 (ENSSSCG00000006285) #31	C1orf112 (ENSSSCG00000006284) #32	SCYL3 (ENSSSCG00000006283) #33	KIFAP3 (ENSSSCG00000006282) #34
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Pecora	ANCESTRAL SPECIES	22	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Yarkand deer	MODERN SPECIES	5	AKT3 (ENSCHYG00000016172)	SDCCAG8 (ENSCHYG00000016893)	ENSCHYG00000017307	CEP170 (ENSCHYG00000017491)	PLD5 (ENSCHYG00000018377)	BECN2 (ENSCHYG00000018602)	MAP1LC3C (ENSCHYG00000018633)	EXO1 (ENSCHYG00000012020)	WDR64 (ENSCHYG00000012124)	ENSCHYG00000012605	KMO (ENSCHYG00000012655)	FH (ENSCHYG00000012784)	RGS7 (ENSCHYG00000012979)	ENSCHYG00000013793 #20	DPT (ENSCHYG00000013923) #21	ATP1B1 (ENSCHYG00000014016) #22	NME7 (ENSCHYG00000014089) #23	BLZF1 (ENSCHYG00000014299) #24	CCDC181 (ENSCHYG00000014390) #25	SLC19A2 (ENSCHYG00000014514) #26	F5 (ENSCHYG00000014668) #27	SELP (ENSCHYG00000014921) #28	SELL (ENSCHYG00000015645) #29	SELE (ENSCHYG00000015811) #30	METTL18 (ENSCHYG00000015908) #31	C1orf112 (ENSCHYG00000016144) #32	SCYL3 (ENSCHYG00000016688) #33	KIFAP3 (ENSCHYG00000016951) #34	NTMT2 (ENSCHYG00000017269) #35	GORAB (ENSCHYG00000017337) #36	PRRX1 (ENSCHYG00000017375) #37
Percora_a	ANCESTRAL SPECIES	15	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000010512.o.b	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Bovidae	ANCESTRAL SPECIES	15	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000010512.o.b	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Caprinae	ANCESTRAL SPECIES	12	ENSGT00940000155092.b	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661.j	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000010512.o.b	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000167970.a.a	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34
Goat	MODERN SPECIES	7	AKT3 (ENSCHIG00000025145)	SDCCAG8 (ENSCHIG00000017782)	CEP170 (ENSCHIG00000026612)	PLD5 (ENSCHIG00000017711)	MAP1LC3C (ENSCHIG00000024130)	EXO1 (ENSCHIG00000013001)	WDR64 (ENSCHIG00000018653)	CHML (ENSCHIG00000002071)	KMO (ENSCHIG00000018212)	FH (ENSCHIG00000003286)	ENSCHIG00000016226	ENSCHIG00000024203	ENSCHIG00000017060 #20	ENSCHIG00000025827 #20	DPT (ENSCHIG00000014401) #21	ATP1B1 (ENSCHIG00000023627) #22	NME7 (ENSCHIG00000009802) #23	ENSCHIG00000018251	ENSCHIG00000008894	ENSCHIG00000011560 #24	ENSCHIG00000024610	CCDC181 (ENSCHIG00000012852) #25	SLC19A2 (ENSCHIG00000012742) #26	F5 (ENSCHIG00000015374) #27	SELP (ENSCHIG00000024573) #28	ENSCHIG00000010201	SELL (ENSCHIG00000021725) #29	SELE (ENSCHIG00000005650) #30	METTL18 (ENSCHIG00000008379) #31	C1orf112 (ENSCHIG00000016456) #32	SCYL3 (ENSCHIG00000002950) #33
Rambouillet Sheep	MODERN SPECIES	3	ZBTB18 (ENSOARG00020005168)	AKT3 (ENSOARG00020005210)	CEP170 (ENSOARG00020005464)	PLD5 (ENSOARG00020005705)	ENSOARG00020005851	MAP1LC3C (ENSOARG00020005910)	EXO1 (ENSOARG00020005940)	WDR64 (ENSOARG00020005994)	KMO (ENSOARG00020006259)	FH (ENSOARG00020006418)	RGS7 (ENSOARG00020006899)	ENSOARG00020007655	XCL1 (ENSOARG00020007666) #20	ENSOARG00020007688 #20	DPT (ENSOARG00020007710) #21	ATP1B1 (ENSOARG00020007736) #22	NME7 (ENSOARG00020007807) #23	ENSOARG00020008009	BLZF1 (ENSOARG00020008036) #24	CCDC181 (ENSOARG00020008091) #25	SLC19A2 (ENSOARG00020008147) #26	SELP (ENSOARG00020008417) #28	ENSOARG00020008710	SELL (ENSOARG00020008728) #29	SELE (ENSOARG00020008826) #30	METTL18 (ENSOARG00020008877) #31	C1orf112 (ENSOARG00020008897) #32	SCYL3 (ENSOARG00020009121) #33	KIFAP3 (ENSOARG00020009331) #34	ENSOARG00020009731 #35	ENSOARG00020009764
Bovinae	ANCESTRAL SPECIES	12	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Bos	ANCESTRAL SPECIES	12	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244.a.a #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.b	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Bos_a	ANCESTRAL SPECIES	8	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263480.a.b.a.a.b.a.a.a.b	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244.a.a #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.b	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Wild yak	MODERN SPECIES	1412																ATP1B1 (ENSBMUG00000020523) #22	NME7 (ENSBMUG00000020639) #23	ENSBMUG00000020670	BLZF1 (ENSBMUG00000020674) #24	ENSBMUG00000020683	CCDC181 (ENSBMUG00000020704) #25	SLC19A2 (ENSBMUG00000020730) #26	F5 (ENSBMUG00000020757) #27	SELP (ENSBMUG00000020869) #28	SELL (ENSBMUG00000020892) #29	SELE (ENSBMUG00000020899) #30	METTL18 (ENSBMUG00000020909) #31	C1orf112 (ENSBMUG00000020956) #32	SCYL3 (ENSBMUG00000021030) #33	KIFAP3 (ENSBMUG00000021135) #34	NTMT2 (ENSBMUG00000021162) #35
Domestic yak	MODERN SPECIES	5	CEP170 (ENSBGRG00000010480)	PLD5 (ENSBGRG00000010829)	BECN2 (ENSBGRG00000011233)	MAP1LC3C (ENSBGRG00000011311)	EXO1 (ENSBGRG00000011413)	WDR64 (ENSBGRG00000011821)	CHML (ENSBGRG00000012256)	KMO (ENSBGRG00000012289)	FH (ENSBGRG00000012621)	RGS7 (ENSBGRG00000012889)	ENSBGRG00000013968	ENSBGRG00000013992	ENSBGRG00000014009 #20	ENSBGRG00000014108 #20	DPT (ENSBGRG00000014147) #21	ATP1B1 (ENSBGRG00000014219) #22	NME7 (ENSBGRG00000014307) #23	ENSBGRG00000014584	BLZF1 (ENSBGRG00000014617) #24	ENSBGRG00000003663	ENSBGRG00000003688 #25	SLC19A2 (ENSBGRG00000003770) #26	F5 (ENSBGRG00000003838) #27	ENSBGRG00000003903	SELP (ENSBGRG00000003978) #28	SELL (ENSBGRG00000004733) #29	SELE (ENSBGRG00000004787) #30	METTL18 (ENSBGRG00000004907) #31	C1orf112 (ENSBGRG00000004950) #32	SCYL3 (ENSBGRG00000005219) #33	KIFAP3 (ENSBGRG00000005284) #34
Bos_b	ANCESTRAL SPECIES	9	ENSGT00940000157060	ENSGT00730000111198	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b	ENSGT00390000008164.d	ENSGT00940000161852	ENSGT00510000047676	ENSGT00940000160037	ENSGT00950000182994.A.n.b	ENSGT00390000000747	ENSGT00950000183122.A	ENSGT00940000156661	ENSGT01100000263557.A.b.b.c #20	ENSGT01100000263557.A.b.b.d #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b	ENSGT00390000018244.a.a #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.b	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Hybrid Bos Indicus	MODERN SPECIES	7	SDCCAG8 (ENSBIXG00005025302)	CEP170 (ENSBIXG00005025170)	PLD5 (ENSBIXG00005024812)	BECN2 (ENSBIXG00005024712)	MAP1LC3C (ENSBIXG00005024701)	EXO1 (ENSBIXG00005024677)	WDR64 (ENSBIXG00005024607)	CHML (ENSBIXG00005024458)	KMO (ENSBIXG00005024440)	FH (ENSBIXG00005004166)	RGS7 (ENSBIXG00005024288)	ENSBIXG00005024125	ENSBIXG00005024089 #20	ENSBIXG00005024063 #20	DPT (ENSBIXG00005024017) #21	ATP1B1 (ENSBIXG00005023955) #22	NME7 (ENSBIXG00005023880) #23	ENSBIXG00005004083	ENSBIXG00005007176	BLZF1 (ENSBIXG00005023817) #24	ENSBIXG00005023777	CCDC181 (ENSBIXG00005023767) #25	SLC19A2 (ENSBIXG00005023733) #26	ENSBIXG00005023683	F5 (ENSBIXG00005004052) #27	ENSBIXG00005023630	SELP (ENSBIXG00005004040) #28	SELL (ENSBIXG00005023507) #29	SELE (ENSBIXG00005023462) #30	METTL18 (ENSBIXG00005023427) #31	C1orf112 (ENSBIXG00005023391) #32
Cow	MODERN SPECIES	7	SDCCAG8 (ENSBTAG00000017775)	CEP170 (ENSBTAG00000007566)	PLD5 (ENSBTAG00000033056)	BECN2 (ENSBTAG00000013700)	MAP1LC3C (ENSBTAG00000012462)	EXO1 (ENSBTAG00000009396)	WDR64 (ENSBTAG00000005200)	CHML (ENSBTAG00000010803)	KMO (ENSBTAG00000014439)	FH (ENSBTAG00000021688)	RGS7 (ENSBTAG00000005410)	ENSBTAG00000053912	ENSBTAG00000009943 #20	XCL1 (ENSBTAG00000009938) #20	DPT (ENSBTAG00000021211) #21	ATP1B1 (ENSBTAG00000002688) #22	NME7 (ENSBTAG00000002689) #23	BLZF1 (ENSBTAG00000002690) #24	ENSBTAG00000024548	CCDC181 (ENSBTAG00000020264) #25	SLC19A2 (ENSBTAG00000020266) #26	F5 (ENSBTAG00000017722) #27	SELP (ENSBTAG00000020755) #28	SELL (ENSBTAG00000011515) #29	SELE (ENSBTAG00000007307) #30	METTL18 (ENSBTAG00000021671) #31	C16H1orf112 (ENSBTAG00000014793) #32	SCYL3 (ENSBTAG00000014794) #33	KIFAP3 (ENSBTAG00000017727) #34	NTMT2 (ENSBTAG00000021298) #35	GORAB (ENSBTAG00000003295) #36
American bison	MODERN SPECIES	2998		SDCCAG8 (ENSBBBG00000017231)	CEP170 (ENSBBBG00000017198)	ENSBBBG00000017077	PLD5 (ENSBBBG00000017060)	BECN2 (ENSBBBG00000004215)	MAP1LC3C (ENSBBBG00000017013)	EXO1 (ENSBBBG00000004208)	WDR64 (ENSBBBG00000016916)	ENSBBBG00000008338	KMO (ENSBBBG00000007307)	FH (ENSBBBG00000006850)	RGS7 (ENSBBBG00000000710)	ENSBBBG00000016601 #20	DPT (ENSBBBG00000016591) #21	ATP1B1 (ENSBBBG00000000737) #22	NME7 (ENSBBBG00000016575) #23	ENSBBBG00000006997	BLZF1 (ENSBBBG00000016544) #24	ENSBBBG00000016522	CCDC181 (ENSBBBG00000004074) #25	SLC19A2 (ENSBBBG00000016487) #26	F5 (ENSBBBG00000016447) #27	SELP (ENSBBBG00000004051) #28	SELL (ENSBBBG00000016222) #29	SELE (ENSBBBG00000016203) #30	METTL18 (ENSBBBG00000000768) #31	C1orf112 (ENSBBBG00000000769) #32	SCYL3 (ENSBBBG00000016089) #33	KIFAP3 (ENSBBBG00000003985) #34	NTMT2 (ENSBBBG00000015911) #35
Siberian musk deer	MODERN SPECIES	192			PLD5 (ENSMMSG00000003562)	ENSMMSG00000003603	MAP1LC3C (ENSMMSG00000003621)	EXO1 (ENSMMSG00000003649)	WDR64 (ENSMMSG00000003715)	ENSMMSG00000003790	ENSMMSG00000003813	KMO (ENSMMSG00000003836)	FH (ENSMMSG00000003912)	RGS7 (ENSMMSG00000003970)	ENSMMSG00000004145 #20	ENSMMSG00000004151 #20	DPT (ENSMMSG00000004162) #21	ATP1B1 (ENSMMSG00000004172) #22	NME7 (ENSMMSG00000004188) #23	ENSMMSG00000004200	BLZF1 (ENSMMSG00000004208) #24	ENSMMSG00000004216	CCDC181 (ENSMMSG00000004221) #25	SLC19A2 (ENSMMSG00000004241) #26	F5 (ENSMMSG00000004291) #27	SELP (ENSMMSG00000004417) #28	SELL (ENSMMSG00000004458) #29	SELE (ENSMMSG00000004499) #30	METTL18 (ENSMMSG00000004515) #31	C1orf112 (ENSMMSG00000004531) #32	SCYL3 (ENSMMSG00000004616) #33	KIFAP3 (ENSMMSG00000014898) #34	NTMT2 (ENSMMSG00000015038) #35
Cetacea	ANCESTRAL SPECIES		ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b.g #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.w #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.b #20	ENSGT01100000263557.A.b.b.a #20	ENSGT00390000015537.v.b	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Odontoceti	ANCESTRAL SPECIES		ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b.g #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.w #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.a #20	ENSGT00390000015537.v.b	ENSGT01100000263557.A.b.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00940000155052.e.b.b.a	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b.g #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.w #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.a #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Dolphin	MODERN SPECIES	754																ATP1B1 (ENSTTRG00000005701) #22	NME7 (ENSTTRG00000005703) #23
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b.g #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.w #12	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.b.a.a.a.b	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.a #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000009320.`b	ENSGT00940000155052.f	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b.g #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120.w #12	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.b.a.a.a.b	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b.a #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000009320.`b	ENSGT00940000155052.f	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Narwhal	MODERN SPECIES	304	POU2F1 (ENSMMNG00015003259)	CD247 (ENSMMNG00015003207)	CREG1 (ENSMMNG00015003189) #7	RCSD1 (ENSMMNG00015003164) #8	MPZL1 (ENSMMNG00015003136)	ADCY10 (ENSMMNG00015002980) #11	ENSMMNG00015002898	ENSMMNG00015002878 #12	DCAF6 (ENSMMNG00015002803) #13	GPR161 (ENSMMNG00015002727) #15	ENSMMNG00015002695	SFT2D2 (ENSMMNG00015002663) #17	TBX19 (ENSMMNG00015002645) #18	ENSMMNG00015002617 #20	DPT (ENSMMNG00015002583) #21	ATP1B1 (ENSMMNG00015002564) #22	NME7 (ENSMMNG00015002536) #23	BLZF1 (ENSMMNG00015002503) #24	ENSMMNG00015002493	CCDC181 (ENSMMNG00015002465) #25	SLC19A2 (ENSMMNG00015002427) #26	F5 (ENSMMNG00015002392) #27	SELP (ENSMMNG00015002136) #28	SELL (ENSMMNG00015002003) #29	SELE (ENSMMNG00015001895) #30	METTL18 (ENSMMNG00015001845) #31	C1orf112 (ENSMMNG00015001809) #32	SCYL3 (ENSMMNG00015001743) #33	KIFAP3 (ENSMMNG00015001648) #34	NTMT2 (ENSMMNG00015001587) #35	GORAB (ENSMMNG00015001548) #36
Beluga whale	MODERN SPECIES	73	STYXL2 (ENSDLEG00000021284)	POU2F1 (ENSDLEG00000021286)	CREG1 (ENSDLEG00000021290) #7	RCSD1 (ENSDLEG00000021293) #8	MPZL1 (ENSDLEG00000021298)	ADCY10 (ENSDLEG00000021305) #11	MPC2 (ENSDLEG00000021315) #12	ENSDLEG00000021316	DCAF6 (ENSDLEG00000021321) #13	GPR161 (ENSDLEG00000021323) #15	TIPRL (ENSDLEG00000021325)	SFT2D2 (ENSDLEG00000021327) #17	TBX19 (ENSDLEG00000021328) #18	XCL1 (ENSDLEG00000021330)	DPT (ENSDLEG00000021332) #21	ATP1B1 (ENSDLEG00000021333) #22	NME7 (ENSDLEG00000021335) #23	BLZF1 (ENSDLEG00000021336) #24	ENSDLEG00000021338	ENSDLEG00000021339	CCDC181 (ENSDLEG00000021341) #25	SLC19A2 (ENSDLEG00000021342) #26	ENSDLEG00000021344	F5 (ENSDLEG00000021350) #27	SELP (ENSDLEG00000021355) #28	SELL (ENSDLEG00000021357) #29	SELE (ENSDLEG00000021359) #30	METTL18 (ENSDLEG00000021361) #31	C1orf112 (ENSDLEG00000021363) #32	SCYL3 (ENSDLEG00000021371) #33	KIFAP3 (ENSDLEG00000021422) #34
Vaquita	MODERN SPECIES		CD247 (ENSPSNG00000017428)	CREG1 (ENSPSNG00000017560) #7	RCSD1 (ENSPSNG00000017633) #8	MPZL1 (ENSPSNG00000017712)	ADCY10 (ENSPSNG00000017822) #11	ENSPSNG00000009674 #12	ENSPSNG00000009705	DCAF6 (ENSPSNG00000009821) #13	GPR161 (ENSPSNG00000010092) #15	TIPRL (ENSPSNG00000010420)	SFT2D2 (ENSPSNG00000010471) #17	TBX19 (ENSPSNG00000010558) #18	ENSPSNG00000010654 #20	ENSPSNG00000010714 #20	DPT (ENSPSNG00000010782) #21	ATP1B1 (ENSPSNG00000010838) #22	NME7 (ENSPSNG00000010935) #23	BLZF1 (ENSPSNG00000011003) #24	ENSPSNG00000011048	SLC19A2 (ENSPSNG00000011097) #26	F5 (ENSPSNG00000011252) #27	SELP (ENSPSNG00000011448) #28	SELL (ENSPSNG00000012162) #29	SELE (ENSPSNG00000012325) #30	METTL18 (ENSPSNG00000012677) #31	C1orf112 (ENSPSNG00000012703) #32	SCYL3 (ENSPSNG00000012779) #33	KIFAP3 (ENSPSNG00000012924) #34	GORAB (ENSPSNG00000013376) #36	PRRX1 (ENSPSNG00000013415) #37	MROH9 (ENSPSNG00000013570)
Sperm whale	MODERN SPECIES	15	CREG1 (ENSPCTG00005002865) #7	MPZL1 (ENSPCTG00005002883)	ADCY10 (ENSPCTG00005002913) #11	MPC2 (ENSPCTG00005003034) #12	DCAF6 (ENSPCTG00005003093) #13	GPR161 (ENSPCTG00005003242) #15	TIPRL (ENSPCTG00005003394)	SFT2D2 (ENSPCTG00005003407) #17	TBX19 (ENSPCTG00005003426) #18	ENSPCTG00005003441	ENSPCTG00005003450 #20	ENSPCTG00005003462 #20	ENSPCTG00005003471	DPT (ENSPCTG00005003481) #21	ENSPCTG00005003490	ATP1B1 (ENSPCTG00005003502) #22	NME7 (ENSPCTG00005003534) #23	BLZF1 (ENSPCTG00005003605) #24	ENSPCTG00005003623	CCDC181 (ENSPCTG00005003634) #25	SLC19A2 (ENSPCTG00005003670) #26	F5 (ENSPCTG00005003722) #27	SELP (ENSPCTG00005003782) #28	SELL (ENSPCTG00005003917) #29	SELE (ENSPCTG00005003943) #30	METTL18 (ENSPCTG00005003983) #31	C4H1orf112 (ENSPCTG00005003999) #32	SCYL3 (ENSPCTG00005004042) #33	KIFAP3 (ENSPCTG00005004091) #34	NTMT2 (ENSPCTG00005004153) #35	GORAB (ENSPCTG00005004177) #36
Blue whale	MODERN SPECIES		CREG1 (ENSBMSG00010008365) #7	ENSBMSG00010008392 #8	MPZL1 (ENSBMSG00010008431)	ADCY10 (ENSBMSG00010008475) #11	ENSBMSG00010008568 #12	DCAF6 (ENSBMSG00010008609) #13	GPR161 (ENSBMSG00010008675) #15	TIPRL (ENSBMSG00010008795)	SFT2D2 (ENSBMSG00010008816) #17	TBX19 (ENSBMSG00010008853) #18	ENSBMSG00010008875 #20	ENSBMSG00010008885 #20	ENSBMSG00010008896	DPT (ENSBMSG00010008908) #21	ENSBMSG00010008919	ATP1B1 (ENSBMSG00010008937) #22	NME7 (ENSBMSG00010008951) #23	BLZF1 (ENSBMSG00010008964) #24	ENSBMSG00010008982	CCDC181 (ENSBMSG00010008990) #25	SLC19A2 (ENSBMSG00010009007) #26	F5 (ENSBMSG00010009032) #27	SELP (ENSBMSG00010009122) #28	SELL (ENSBMSG00010009263) #29	SELE (ENSBMSG00010009310) #30	ENSBMSG00010009603	METTL18 (ENSBMSG00010009612) #31	C1orf112 (ENSBMSG00010009621) #32	SCYL3 (ENSBMSG00010009669) #33	KIFAP3 (ENSBMSG00010009766) #34	NTMT2 (ENSBMSG00010009859) #35
Camelidae	ANCESTRAL SPECIES	6	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Alpaca	MODERN SPECIES	861														ENSVPAG00000002607	DPT (ENSVPAG00000002608) #21	ENSVPAG00000002609 #22	NME7 (ENSVPAG00000002610) #23
Arabian camel	MODERN SPECIES	13	STYXL2 (ENSCDRG00005005183)	POU2F1 (ENSCDRG00005005211)	CD247 (ENSCDRG00005005314)	CREG1 (ENSCDRG00005005365) #7	RCSD1 (ENSCDRG00005005407) #8	MPZL1 (ENSCDRG00005005443)	ADCY10 (ENSCDRG00005005498) #11	MPC2 (ENSCDRG00005005706) #12	DCAF6 (ENSCDRG00005005798) #13	GPR161 (ENSCDRG00005007590) #15	TIPRL (ENSCDRG00005007962)	SFT2D2 (ENSCDRG00005008078) #17	TBX19 (ENSCDRG00005008159) #18	ENSCDRG00005008249 #20	DPT (ENSCDRG00005008287) #21	ATP1B1 (ENSCDRG00005008319) #22	NME7 (ENSCDRG00005008374) #23	BLZF1 (ENSCDRG00005008516) #24	CCDC181 (ENSCDRG00005008562) #25	SLC19A2 (ENSCDRG00005008641) #26	F5 (ENSCDRG00005008773) #27	SELP (ENSCDRG00005008953) #28	SELL (ENSCDRG00005009308) #29	SELE (ENSCDRG00005009415) #30	ENSCDRG00005009833	METTL18 (ENSCDRG00005009855) #31	C1orf112 (ENSCDRG00005009909) #32	SCYL3 (ENSCDRG00005010276) #33	KIFAP3 (ENSCDRG00005010490) #34	NTMT2 (ENSCDRG00005011069) #35	GORAB (ENSCDRG00005011132) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234579.C #22
Hedgehog	MODERN SPECIES	3984																ATP1B1 (ENSEEUG00000005272) #22
Common shrew	MODERN SPECIES	11910																ENSSARG00000001715 #22
Atlantogenata	ANCESTRAL SPECIES	15	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT01030000234556.a.b.a	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Afrotheria	ANCESTRAL SPECIES	120							ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Tenrec	MODERN SPECIES	3865																ATP1B1 (ENSETEG00000020279) #22	ENSETEG00000020281
Afrotheria_a	ANCESTRAL SPECIES	123							ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37
Hyrax	MODERN SPECIES	3182																ENSPCAG00000009190 #22	NME7 (ENSPCAG00000009230) #23
Elephant	MODERN SPECIES	325							ADCY10 (ENSLAFG00000005846) #11	MPC2 (ENSLAFG00000022641) #12	DCAF6 (ENSLAFG00000005850) #13	GPR161 (ENSLAFG00000007242) #15	TIPRL (ENSLAFG00000007730)	SFT2D2 (ENSLAFG00000020840) #17	TBX19 (ENSLAFG00000011227) #18	ENSLAFG00000017780 #20	DPT (ENSLAFG00000011745) #21	ATP1B1 (ENSLAFG00000013066) #22	NME7 (ENSLAFG00000013069) #23	BLZF1 (ENSLAFG00000021576) #24	CCDC181 (ENSLAFG00000000540) #25	ENSLAFG00000030894	SLC19A2 (ENSLAFG00000003370) #26	F5 (ENSLAFG00000001975) #27	SELP (ENSLAFG00000014536) #28	SELL (ENSLAFG00000007162) #29	SELE (ENSLAFG00000007166) #30	METTL18 (ENSLAFG00000014426) #31	C1orf112 (ENSLAFG00000014427) #32	SCYL3 (ENSLAFG00000018090) #33	KIFAP3 (ENSLAFG00000018434) #34	NTMT2 (ENSLAFG00000001800) #35	GORAB (ENSLAFG00000029502) #36
Xenarthra	ANCESTRAL SPECIES	140									ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000162076 #29	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35
Sloth	MODERN SPECIES	3515																ATP1B1 (ENSCHOG00000000420) #22	ENSCHOG00000000421
Armadillo	MODERN SPECIES	2124									DCAF6 (ENSDNOG00000010184) #13	GPR161 (ENSDNOG00000046510) #15	TIPRL (ENSDNOG00000042352)	SFT2D2 (ENSDNOG00000033210) #17	TBX19 (ENSDNOG00000015810) #18	ENSDNOG00000042103 #20	DPT (ENSDNOG00000030723) #21	ATP1B1 (ENSDNOG00000002871) #22	NME7 (ENSDNOG00000002753) #23	BLZF1 (ENSDNOG00000045925) #24	CCDC181 (ENSDNOG00000045094) #25	SLC19A2 (ENSDNOG00000018260) #26	F5 (ENSDNOG00000018263) #27	SELP (ENSDNOG00000019844) #28	ENSDNOG00000007343	ENSDNOG00000045728	SELL (ENSDNOG00000041443) #29	SELE (ENSDNOG00000019846) #30	ENSDNOG00000012231 #31	C1orf112 (ENSDNOG00000012235) #32	SCYL3 (ENSDNOG00000010260) #33	KIFAP3 (ENSDNOG00000016340) #34	NTMT2 (ENSDNOG00000037672) #35
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063 #28	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36	ENSGT00940000159466 #37	ENSGT00940000162280
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063.e.a #28	ENSGT00940000161063.e.b #28	ENSGT00940000161063.f #28	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063.e.a #28	ENSGT00940000161063.e.b #28	ENSGT00940000161063.f #28	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153997.b.a.b #8	ENSGT00390000001322 #11	ENSGT00510000047120 #12	ENSGT00950000182900.C #13	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01100000263557.A.b.b #20	ENSGT00940000165676	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00940000161063.e.a #28	ENSGT00940000161063.e.b #28	ENSGT00940000161063.f #28	ENSGT00940000160168 #30	ENSGT00390000000464 #31	ENSGT00390000004791 #32	ENSGT00930000151043 #33	ENSGT00390000003574 #34	ENSGT00390000008371.a #35	ENSGT00390000014886 #36
Common wonbat	MODERN SPECIES	1026	GPA33 (ENSVURG00010003648)	STYXL2 (ENSVURG00010003658)	POU2F1 (ENSVURG00010003684)	CD247 (ENSVURG00010003723)	CREG1 (ENSVURG00010003741) #7	ENSVURG00010003782 #8	ADCY10 (ENSVURG00010003815) #11	MPC2 (ENSVURG00010003929) #12	DCAF6 (ENSVURG00010003937) #13	GPR161 (ENSVURG00010003979) #15	TIPRL (ENSVURG00010004003)	SFT2D2 (ENSVURG00010004013) #17	ENSVURG00010004027 #20	ENSVURG00010004041	DPT (ENSVURG00010004063) #21	ATP1B1 (ENSVURG00010004104) #22	NME7 (ENSVURG00010004120) #23	BLZF1 (ENSVURG00010004137) #24	CCDC181 (ENSVURG00010004178) #25	SLC19A2 (ENSVURG00010004191) #26	F5 (ENSVURG00010004211) #27	SELP (ENSVURG00010004304) #28	ENSVURG00010004358 #28	SELE (ENSVURG00010004387) #30	METTL18 (ENSVURG00010004399) #31	C1orf112 (ENSVURG00010004410) #32	SCYL3 (ENSVURG00010004512) #33	KIFAP3 (ENSVURG00010004572) #34	NTMT2 (ENSVURG00010004667) #35	GORAB (ENSVURG00010004691) #36	PRRX1 (ENSVURG00010004718) #37
koala	MODERN SPECIES	257	STYXL2 (ENSPCIG00000030048)	POU2F1 (ENSPCIG00000030506)	CD247 (ENSPCIG00000030509)	ENSPCIG00000034929 #7	RCSD1 (ENSPCIG00000030515) #8	ADCY10 (ENSPCIG00000030525) #11	ENSPCIG00000030531 #12	DCAF6 (ENSPCIG00000030532) #13	ENSPCIG00000030534 #15	TIPRL (ENSPCIG00000030535)	SFT2D2 (ENSPCIG00000030536) #17	TBX19 (ENSPCIG00000030646) #18	ENSPCIG00000030540 #20	ENSPCIG00000034139	DPT (ENSPCIG00000022676) #21	ATP1B1 (ENSPCIG00000007561) #22	NME7 (ENSPCIG00000028778) #23	BLZF1 (ENSPCIG00000028779) #24	CCDC181 (ENSPCIG00000028780) #25	SLC19A2 (ENSPCIG00000028782) #26	F5 (ENSPCIG00000028783) #27	ENSPCIG00000028784 #28	ENSPCIG00000034755 #28	ENSPCIG00000028786 #28	SELE (ENSPCIG00000028787) #30	METTL18 (ENSPCIG00000024038) #31	C1orf112 (ENSPCIG00000024034) #32	SCYL3 (ENSPCIG00000024032) #33	KIFAP3 (ENSPCIG00000024029) #34
Wallaby	MODERN SPECIES	5024																ATP1B1 (ENSMEUG00000006242) #22	ENSMEUG00000006250
Tasmanian devil	MODERN SPECIES	3	STYXL2 (ENSSHAG00000018419)	POU2F1 (ENSSHAG00000018562)	CD247 (ENSSHAG00000023134)	CREG1 (ENSSHAG00000031715) #7	RCSD1 (ENSSHAG00000018797) #8	ADCY10 (ENSSHAG00000018832) #11	ENSSHAG00000024363 #12	DCAF6 (ENSSHAG00000018883) #13	GPR161 (ENSSHAG00000018911) #15	TIPRL (ENSSHAG00000028081)	SFT2D2 (ENSSHAG00000029837) #17	TBX19 (ENSSHAG00000022978) #18	ENSSHAG00000018950 #20	ENSSHAG00000004166	DPT (ENSSHAG00000022487) #21	ENSSHAG00000024967 #22	ENSSHAG00000005738	BLZF1 (ENSSHAG00000007669) #24	CCDC181 (ENSSHAG00000007871) #25	SLC19A2 (ENSSHAG00000008381) #26	F5 (ENSSHAG00000008881) #27	SELP (ENSSHAG00000009722) #28	ENSSHAG00000010339 #28	SELE (ENSSHAG00000010556) #30	METTL18 (ENSSHAG00000010921) #31	C1orf112 (ENSSHAG00000010949) #32	SCYL3 (ENSSHAG00000011339) #33	KIFAP3 (ENSSHAG00000011953) #34	NTMT2 (ENSSHAG00000013039) #35	GORAB (ENSSHAG00000027057) #36	PRRX1 (ENSSHAG00000031839) #37
Opossum	MODERN SPECIES	1	STYXL2 (ENSMODG00000002519)	ENSMODG00000002572	CD247 (ENSMODG00000002586)	CREG1 (ENSMODG00000045299) #7	RCSD1 (ENSMODG00000002597) #8	ADCY10 (ENSMODG00000002779) #11	MPC2 (ENSMODG00000039319) #12	DCAF6 (ENSMODG00000002855) #13	GPR161 (ENSMODG00000002870) #15	ENSMODG00000002880	SFT2D2 (ENSMODG00000002896) #17	TBX19 (ENSMODG00000002921) #18	ENSMODG00000002933 #20	ENSMODG00000027516	DPT (ENSMODG00000040982) #21	ATP1B1 (ENSMODG00000002980) #22	NME7 (ENSMODG00000003002) #23	BLZF1 (ENSMODG00000003015) #24	CCDC181 (ENSMODG00000003052) #25	SLC19A2 (ENSMODG00000003071) #26	F5 (ENSMODG00000003126) #27	SELP (ENSMODG00000003164) #28	ENSMODG00000028669 #28	SELE (ENSMODG00000003253) #30	METTL18 (ENSMODG00000003390) #31	C1orf112 (ENSMODG00000003433) #32	SCYL3 (ENSMODG00000003449) #33	KIFAP3 (ENSMODG00000003544) #34	NTMT2 (ENSMODG00000003562) #35	GORAB (ENSMODG00000045113) #36	PRRX1 (ENSMODG00000003582) #37
Platypus	MODERN SPECIES	7	ENSOANG00000009376	ENSOANG00000041693	CD247 (ENSOANG00000044103)	CREG1 (ENSOANG00000043345) #7	ENSOANG00000003880 #8	MPZL1 (ENSOANG00000003882)	ADCY10 (ENSOANG00000003885) #11	MPC2 (ENSOANG00000037645) #12	DCAF6 (ENSOANG00000003887) #13	GPR161 (ENSOANG00000045818) #15	TIPRL (ENSOANG00000050237)	SFT2D2 (ENSOANG00000047861) #17	TBX19 (ENSOANG00000003892) #18	ENSOANG00000003893	DPT (ENSOANG00000000854) #21	ATP1B1 (ENSOANG00000000855) #22	NME7 (ENSOANG00000000856) #23	BLZF1 (ENSOANG00000000860) #24	ENSOANG00000000862 #25	SLC19A2 (ENSOANG00000000864) #26	F5 (ENSOANG00000000866) #27	SELP (ENSOANG00000000873) #28	ENSOANG00000000875 #28	C1orf112 (ENSOANG00000000879) #32	ENSOANG00000000876 #30	METTL18 (ENSOANG00000016063) #31	SCYL3 (ENSOANG00000000881) #33	KIFAP3 (ENSOANG00000000884) #34	ENSOANG00000000888 #35	GORAB (ENSOANG00000000891) #36	PRRX1 (ENSOANG00000037230) #37
Sauria	ANCESTRAL SPECIES	2	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00940000161699	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749
Archelosauria	ANCESTRAL SPECIES	30	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323	ENSGT00940000158810
Archosauria	ANCESTRAL SPECIES	2	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323	ENSGT00940000158810
Aves	ANCESTRAL SPECIES		ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323	ENSGT00940000158810
African ostrich	MODERN SPECIES	620	ENSSCUG00000008097	FILIP1L (ENSSCUG00000008101)	CMSS1 (ENSSCUG00000008104)	ENSSCUG00000008108	DCBLD2 (ENSSCUG00000008110)	COL8A1 (ENSSCUG00000008121)	ST3GAL6 (ENSSCUG00000008124)	CPOX (ENSSCUG00000008133)	TTF2 (ENSSCUG00000008142)	GPR161 (ENSSCUG00000008145) #15	TIPRL (ENSSCUG00000008150)	SFT2D2 (ENSSCUG00000008153) #17	TBX19 (ENSSCUG00000008155) #18	ENSSCUG00000008160	DPT (ENSSCUG00000008164) #21	ATP1B1 (ENSSCUG00000008170) #22	NME7 (ENSSCUG00000008174) #23	BLZF1 (ENSSCUG00000008181) #24	CCDC181 (ENSSCUG00000008184) #25	ENSSCUG00000008188 #26	ENSSCUG00000008192 #26	F5 (ENSSCUG00000008194) #27	ATG3 (ENSSCUG00000008204)	SLC35A5 (ENSSCUG00000008207)	ENSSCUG00000008209	ENSSCUG00000008210	GTPBP8 (ENSSCUG00000008211)	ENSSCUG00000008213	TAF13 (ENSSCUG00000008214)	NEPRO (ENSSCUG00000008215)	ENSSCUG00000008216
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00950000185427	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323
Neognathae_b	ANCESTRAL SPECIES		ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00960000189323	ENSGT00940000158810	ENSGT00960000186749
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000007644	ENSGT00960000189323	ENSGT00940000158810	ENSGT00940000161555	ENSGT00950000183058.A.b
Golden eagle	MODERN SPECIES	23	TBC1D23 (ENSACCG00020002712)	FILIP1L (ENSACCG00020002639)	CMSS1 (ENSACCG00020002585)	ENSACCG00020002549	DCBLD2 (ENSACCG00020002528)	COL8A1 (ENSACCG00020002511)	ST3GAL6 (ENSACCG00020002488)	CPOX (ENSACCG00020002464)	ENSACCG00020002442	GPR161 (ENSACCG00020002418) #15	TIPRL (ENSACCG00020002404)	SFT2D2 (ENSACCG00020002392) #17	TBX19 (ENSACCG00020002364) #18	ENSACCG00020002358	DPT (ENSACCG00020002348) #21	ATP1B1 (ENSACCG00020002338) #22	NME7 (ENSACCG00020002324) #23	BLZF1 (ENSACCG00020002301) #24	CCDC181 (ENSACCG00020002283) #25	SLC19A2 (ENSACCG00020002261) #26	F5 (ENSACCG00020002224) #27	ATG3 (ENSACCG00020002194)	SLC35A5 (ENSACCG00020002177)	ENSACCG00020002157	ENSACCG00020002130	GTPBP8 (ENSACCG00020002086)	ENSACCG00020002067	ENSACCG00020002057	NEPRO (ENSACCG00020002038)	ENSACCG00020002019	BOC (ENSACCG00020001965)
Kakapo	MODERN SPECIES	11	TBC1D23 (ENSSHBG00005001546)	FILIP1L (ENSSHBG00005001576)	CMSS1 (ENSSHBG00005001587)	ENSSHBG00005001598	DCBLD2 (ENSSHBG00005001616)	COL8A1 (ENSSHBG00005001634)	ST3GAL6 (ENSSHBG00005001654)	CPOX (ENSSHBG00005001709)	ENSSHBG00005001741	GPR161 (ENSSHBG00005001763) #15	TIPRL (ENSSHBG00005001777)	SFT2D2 (ENSSHBG00005001792) #17	TBX19 (ENSSHBG00005001818) #18	ENSSHBG00005001845	DPT (ENSSHBG00005001878) #21	ATP1B1 (ENSSHBG00005001892) #22	NME7 (ENSSHBG00005001914) #23	BLZF1 (ENSSHBG00005001922) #24	CCDC181 (ENSSHBG00005001929) #25	SLC19A2 (ENSSHBG00005001943) #26	F5 (ENSSHBG00005002100) #27	ATG3 (ENSSHBG00005002369)	SLC35A5 (ENSSHBG00005002391)	ENSSHBG00005002406	ENSSHBG00005002425	GTPBP8 (ENSSHBG00005002447)	NEPRO (ENSSHBG00005002458)	BOC (ENSSHBG00005002472)	CFAP44 (ENSSHBG00005002498)	ILDR1 (ENSSHBG00005002543)	ENSSHBG00005002558
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749	ENSGT00940000161555
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749	ENSGT00940000161555
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749	ENSGT00940000161555
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749	ENSGT00940000161555
Common canary	MODERN SPECIES	4	ENSSCAG00000008878	URB1 (ENSSCAG00000008889)	MIS18A (ENSSCAG00000008901)	DCBLD2 (ENSSCAG00000008922)	ST3GAL6 (ENSSCAG00000008948)	ENSSCAG00000008961	ENSSCAG00000008965	CPOX (ENSSCAG00000008979)	ENSSCAG00000009042	GPR161 (ENSSCAG00000009051) #15	TIPRL (ENSSCAG00000009063)	SFT2D2 (ENSSCAG00000009069) #17	TBX19 (ENSSCAG00000009075) #18	ENSSCAG00000009091	DPT (ENSSCAG00000009095) #21	ATP1B1 (ENSSCAG00000009117) #22	NME7 (ENSSCAG00000009131) #23	BLZF1 (ENSSCAG00000009146) #24	CCDC181 (ENSSCAG00000009152) #25	SLC19A2 (ENSSCAG00000009157) #26	F5 (ENSSCAG00000009170) #27	ATG3 (ENSSCAG00000009183)	SLC35A5 (ENSSCAG00000009195)	ENSSCAG00000009204	GTPBP8 (ENSSCAG00000009236)	TAF13 (ENSSCAG00000009238)	NEPRO (ENSSCAG00000009242)	BOC (ENSSCAG00000009253)	ENSSCAG00000009260	ENSSCAG00000009275	ILDR1 (ENSSCAG00000009282)
Zebra finch	MODERN SPECIES		UCP3 (ENSTGUG00000023183)	SYNJ1 (ENSTGUG00000013445)	CFAP298 (ENSTGUG00000013444)	ENSTGUG00000013443	URB1 (ENSTGUG00000013442)	COL8A1 (ENSTGUG00000013441)	ST3GAL6 (ENSTGUG00000013440)	CPOX (ENSTGUG00000013439)	ENSTGUG00000013438	GPR161 (ENSTGUG00000013437) #15	TIPRL (ENSTGUG00000026810)	SFT2D2 (ENSTGUG00000020039) #17	TBX19 (ENSTGUG00000013434) #18	ENSTGUG00000013433	DPT (ENSTGUG00000019712) #21	ATP1B1 (ENSTGUG00000013431) #22	CCDC181 (ENSTGUG00000023069) #25	NME7 (ENSTGUG00000013430) #23	BLZF1 (ENSTGUG00000013429) #24	SLC19A2 (ENSTGUG00000013427) #26	F5 (ENSTGUG00000013426) #27	SLC35A5 (ENSTGUG00000013424)	ENSTGUG00000013423	ENSTGUG00000019816	GTPBP8 (ENSTGUG00000013421)	TAF13 (ENSTGUG00000013420)	NEPRO (ENSTGUG00000013419)	ENSTGUG00000013418	BOC (ENSTGUG00000013417)	CFAP44 (ENSTGUG00000013415)	ILDR1 (ENSTGUG00000020714)
Medium ground finch	MODERN SPECIES	23	ENSGFOG00000001441	CD200 (ENSGFOG00000001447)	LTN1 (ENSGFOG00000001457)	RWDD2B (ENSGFOG00000001479)	USP16 (ENSGFOG00000001490)	DCBLD2 (ENSGFOG00000001546)	COL8A1 (ENSGFOG00000001567)	ST3GAL6 (ENSGFOG00000001574)	CPOX (ENSGFOG00000001613)	ENSGFOG00000001650	GPR161 (ENSGFOG00000001712) #15	ENSGFOG00000001729	SFT2D2 (ENSGFOG00000001735) #17	TBX19 (ENSGFOG00000001746) #18	ENSGFOG00000001757	ATP1B1 (ENSGFOG00000001762) #22	DPT (ENSGFOG00000001769) #21	NME7 (ENSGFOG00000001780) #23	BLZF1 (ENSGFOG00000001814) #24	CCDC181 (ENSGFOG00000001819) #25	SLC19A2 (ENSGFOG00000001823) #26	F5 (ENSGFOG00000001858) #27	ATG3 (ENSGFOG00000001929)	SLC35A5 (ENSGFOG00000001969)	ENSGFOG00000001975	ENSGFOG00000001996	GTPBP8 (ENSGFOG00000002008)	TAF13 (ENSGFOG00000002013)	NEPRO (ENSGFOG00000002019)	BOC (ENSGFOG00000002036)	ENSGFOG00000002074
Flycatcher	MODERN SPECIES		RABL3 (ENSFALG00000005296)	HGD (ENSFALG00000005307)	NDUFB4 (ENSFALG00000005312)	FSTL1 (ENSFALG00000028785)	LRRC58 (ENSFALG00000028920)	GPR156 (ENSFALG00000005333)	GSK3B (ENSFALG00000005346)	CFAP91 (ENSFALG00000005370)	ENSFALG00000005381	POPDC2 (ENSFALG00000023145)	PLA1A (ENSFALG00000005402)	ENSFALG00000026264	ENSFALG00000026092	ENSFALG00000005712	DPT (ENSFALG00000005714) #21	ATP1B1 (ENSFALG00000027394) #22	NME7 (ENSFALG00000005744) #23	BLZF1 (ENSFALG00000005752) #24	CCDC181 (ENSFALG00000005756) #25	SLC19A2 (ENSFALG00000005765) #26	F5 (ENSFALG00000005793) #27	ATG3 (ENSFALG00000005830)	SLC35A5 (ENSFALG00000005838)	ENSFALG00000005849	ENSFALG00000005862	ENSFALG00000024428	GTPBP8 (ENSFALG00000028507)	ENSFALG00000005898	NEPRO (ENSFALG00000023460)	ENSFALG00000005909	BOC (ENSFALG00000005921)
Great tit	MODERN SPECIES		NIT2 (ENSPMJG00000011161)	TBC1D23 (ENSPMJG00000011159)	FILIP1L (ENSPMJG00000011157)	CMSS1 (ENSPMJG00000011154)	ENSPMJG00000011147	DCBLD2 (ENSPMJG00000011146)	COL8A1 (ENSPMJG00000011144)	ST3GAL6 (ENSPMJG00000011132)	CPOX (ENSPMJG00000011121)	ENSPMJG00000011116	GPR161 (ENSPMJG00000011114) #15	TIPRL (ENSPMJG00000011113)	SFT2D2 (ENSPMJG00000011111) #17	TBX19 (ENSPMJG00000011107) #18	DPT (ENSPMJG00000011097) #21	ATP1B1 (ENSPMJG00000011076) #22	NME7 (ENSPMJG00000011073) #23	BLZF1 (ENSPMJG00000011070) #24	CCDC181 (ENSPMJG00000011065) #25	SLC19A2 (ENSPMJG00000011063) #26	F5 (ENSPMJG00000011037) #27	ATG3 (ENSPMJG00000011034)	ENSPMJG00000011031	SLC35A5 (ENSPMJG00000011029)	ENSPMJG00000010999	GTPBP8 (ENSPMJG00000010997)	TAF13 (ENSPMJG00000010993)	NEPRO (ENSPMJG00000010992)	ENSPMJG00000010991	ENSPMJG00000010986	BOC (ENSPMJG00000010984)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00950000185427	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.q #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c.a	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323	ENSGT00940000158810
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00990000210696	ENSGT00390000017311	ENSGT00940000164746	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.q #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c.a	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00940000161555	ENSGT00950000183058.A.b
Chicken	MODERN SPECIES		FILIP1L (ENSGALG00010005559)	CMSS1 (ENSGALG00010005557)	TMEM30CP (ENSGALG00010005513)	DCBLD2 (ENSGALG00010005490)	COL8A1 (ENSGALG00010005474)	ST3GAL6 (ENSGALG00010005423)	ENSGALG00010006684	CPOX (ENSGALG00010005386)	ENSGALG00010005465	GPR161 (ENSGALG00010005454) #15	TIPRL (ENSGALG00010005449)	SFT2D2 (ENSGALG00010005445) #17	TBX19 (ENSGALG00010005439) #18	XCL1 (ENSGALG00010005380)	DPT (ENSGALG00010005369) #21	ATP1B1 (ENSGALG00010005362) #22	NME7 (ENSGALG00010005334) #23	BLZF1 (ENSGALG00010005293) #24	CCDC181 (ENSGALG00010005279) #25	SLC19A2 (ENSGALG00010005266) #26	F5 (ENSGALG00010007304) #27	ATG3 (ENSGALG00010005261)	SLC35A5 (ENSGALG00010005250)	CCDC80 (ENSGALG00010005242)	CD200R1A (ENSGALG00010007265)	CD200R1B (ENSGALG00010005233)	GTPBP8 (ENSGALG00010005218)	TAF13 (ENSGALG00010005212)	ENSGALG00010005202	NEPRO (ENSGALG00010005182)	BOC (ENSGALG00010004395)
Turkey	MODERN SPECIES		ENSMGAG00000014361	CMSS1 (ENSMGAG00000014360)	ENSMGAG00000014359	ENSMGAG00000014358	ENSMGAG00000013275	ENSMGAG00000014356	ENSMGAG00000022798	ENSMGAG00000014355	ENSMGAG00000014354	GPR161 (ENSMGAG00000014353) #15	TIPRL (ENSMGAG00000014352)	SFT2D2 (ENSMGAG00000020206) #17	TBX19 (ENSMGAG00000014919) #18	ENSMGAG00000014351	DPT (ENSMGAG00000014350) #21	ATP1B1 (ENSMGAG00000014349) #22	NME7 (ENSMGAG00000014348) #23	BLZF1 (ENSMGAG00000014347) #24	CCDC181 (ENSMGAG00000014346) #25	SLC19A2 (ENSMGAG00000014345) #26	F5 (ENSMGAG00000014344) #27	ATG3 (ENSMGAG00000014343)	SLC35A5 (ENSMGAG00000014342)	ENSMGAG00000014340	ENSMGAG00000020944	ENSMGAG00000014338	ENSMGAG00000019701	GTPBP8 (ENSMGAG00000014337)	ENSMGAG00000014336	NEPRO (ENSMGAG00000014335)	ENSMGAG00000014334
Japanese quail	MODERN SPECIES		NIT2 (ENSCJPG00005017492)	TBC1D23 (ENSCJPG00005017491)	FILIP1L (ENSCJPG00005017490)	CMSS1 (ENSCJPG00005017489)	ENSCJPG00005017488	DCBLD2 (ENSCJPG00005017487)	COL8A1 (ENSCJPG00005017485)	ST3GAL6 (ENSCJPG00005017484)	CPOX (ENSCJPG00005017483)	ENSCJPG00005017482	GPR161 (ENSCJPG00005017481) #15	TIPRL (ENSCJPG00005017480)	TBX19 (ENSCJPG00005017479) #18	ENSCJPG00005017478	DPT (ENSCJPG00005017477) #21	ATP1B1 (ENSCJPG00005017476) #22	NME7 (ENSCJPG00005017475) #23	BLZF1 (ENSCJPG00005017474) #24	CCDC181 (ENSCJPG00005017473) #25	SLC19A2 (ENSCJPG00005017472) #26	F5 (ENSCJPG00005017471) #27	ENSCJPG00005017470	ENSCJPG00005017469	SLC35A5 (ENSCJPG00005017468)	ENSCJPG00005017467	ENSCJPG00005017466	ENSCJPG00005017465	ENSCJPG00005017464	GTPBP8 (ENSCJPG00005017463)	TAF13 (ENSCJPG00005017462)	ENSCJPG00005017461
Anatidae	ANCESTRAL SPECIES	6	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00950000185427	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00960000189323	ENSGT00940000158810
Pink-footed goose	MODERN SPECIES	5	TBC1D23 (ENSABRG00000008797)	FILIP1L (ENSABRG00000008842)	CMSS1 (ENSABRG00000008866)	ENSABRG00000008905	DCBLD2 (ENSABRG00000008936)	COL8A1 (ENSABRG00000008975)	ST3GAL6 (ENSABRG00000008998)	CPOX (ENSABRG00000009018)	ENSABRG00000009030	GPR161 (ENSABRG00000009067) #15	TIPRL (ENSABRG00000009080)	SFT2D2 (ENSABRG00000009094) #17	TBX19 (ENSABRG00000009116) #18	ENSABRG00000009142	DPT (ENSABRG00000009155) #21	ATP1B1 (ENSABRG00000009174) #22	NME7 (ENSABRG00000009203) #23	BLZF1 (ENSABRG00000009231) #24	CCDC181 (ENSABRG00000009243) #25	SLC19A2 (ENSABRG00000009262) #26	ENSABRG00000009272	F5 (ENSABRG00000009292) #27	ATG3 (ENSABRG00000009319)	SLC35A5 (ENSABRG00000009346)	ENSABRG00000009352	ENSABRG00000009375	ENSABRG00000009387	GTPBP8 (ENSABRG00000009401)	TAF13 (ENSABRG00000009413)	NEPRO (ENSABRG00000009419)	ENSABRG00000009439
Duck	MODERN SPECIES		TBC1D23 (ENSAPLG00000010813)	FILIP1L (ENSAPLG00000010761)	CMSS1 (ENSAPLG00000010542)	ENSAPLG00000010337	DCBLD2 (ENSAPLG00000010160)	COL8A1 (ENSAPLG00000029430)	ST3GAL6 (ENSAPLG00000010256)	CPOX (ENSAPLG00000010306)	TTF2 (ENSAPLG00000010324)	GPR161 (ENSAPLG00000010365) #15	TIPRL (ENSAPLG00000010457)	SFT2D2 (ENSAPLG00000010499) #17	TBX19 (ENSAPLG00000010506) #18	ENSAPLG00000017786	DPT (ENSAPLG00000016421) #21	ATP1B1 (ENSAPLG00000016349) #22	NME7 (ENSAPLG00000007691) #23	BLZF1 (ENSAPLG00000007488) #24	CCDC181 (ENSAPLG00000007434) #25	SLC19A2 (ENSAPLG00000007314) #26	ENSAPLG00000027299 #27	ENSAPLG00000020203 #27	ENSAPLG00000005997	ENSAPLG00000024786	SLC35A5 (ENSAPLG00000005975)	ENSAPLG00000026691	ENSAPLG00000028247	ENSAPLG00000015329	GTPBP8 (ENSAPLG00000009443)	TAF13 (ENSAPLG00000017681)	NEPRO (ENSAPLG00000024177)
Australian saltwater crocodile	MODERN SPECIES	60	ENSCPRG00005004465	DCBLD2 (ENSCPRG00005004374)	ENSCPRG00005004363	COL8A1 (ENSCPRG00005004347)	ST3GAL6 (ENSCPRG00005004345)	CPOX (ENSCPRG00005004299)	ENSCPRG00005004288	GPR161 (ENSCPRG00005004286) #15	TIPRL (ENSCPRG00005004280)	SFT2D2 (ENSCPRG00005004264) #17	TBX19 (ENSCPRG00005004255) #18	ENSCPRG00005004251	ENSCPRG00005004248	ENSCPRG00005004236	DPT (ENSCPRG00005004233) #21	ATP1B1 (ENSCPRG00005004207) #22	NME7 (ENSCPRG00005004187) #23	BLZF1 (ENSCPRG00005004154) #24	CCDC181 (ENSCPRG00005004151) #25	SLC19A2 (ENSCPRG00005004149) #26	ENSCPRG00005004141	F5 (ENSCPRG00005004134) #27	ATG3 (ENSCPRG00005004123)	SLC35A5 (ENSCPRG00005004120)	ENSCPRG00005004116	ENSCPRG00005004109	ENSCPRG00005004099	GTPBP8 (ENSCPRG00005004096)	TAF13 (ENSCPRG00005004093)	NEPRO (ENSCPRG00005004089)	ENSCPRG00005004085
Cryptodira	ANCESTRAL SPECIES		ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000165376	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323	ENSGT00940000158810
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00390000006574	ENSGT00390000004660.C.b.a	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000165376	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT00940000170848	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.m #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000018386.l	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476	ENSGT00960000189323
Testudinidae	ANCESTRAL SPECIES		ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b.a	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000165376	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT00940000170848	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.m #27	ENSGT00940000158556.n #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496.`c	ENSGT00390000001083	ENSGT00390000018386.l	ENSGT00390000012981	ENSGT00390000007644	ENSGT01000000215476
Goode s thornscrub tortoise	MODERN SPECIES		FILIP1L (ENSGEVG00005008358)	CMSS1 (ENSGEVG00005008374)	ENSGEVG00005008398	DCBLD2 (ENSGEVG00005008466)	COL8A1 (ENSGEVG00005008586)	ST3GAL6 (ENSGEVG00005008605)	CPOX (ENSGEVG00005008677)	ENSGEVG00005008704	GPR161 (ENSGEVG00005008761) #15	TIPRL (ENSGEVG00005008801)	SFT2D2 (ENSGEVG00005008832) #17	TBX19 (ENSGEVG00005008861) #18	ENSGEVG00005008927	DPT (ENSGEVG00005008943) #21	ENSGEVG00005009005	ATP1B1 (ENSGEVG00005009026) #22	NME7 (ENSGEVG00005009076) #23	BLZF1 (ENSGEVG00005009152) #24	CCDC181 (ENSGEVG00005009193) #25	SLC19A2 (ENSGEVG00005009274) #26	ENSGEVG00005009461 #27	ENSGEVG00005010587 #27	ATG3 (ENSGEVG00005010748)	SLC35A5 (ENSGEVG00005010768)	ENSGEVG00005010793	ENSGEVG00005010868	GTPBP8 (ENSGEVG00005010916)	ENSGEVG00005010969	ENSGEVG00005011071	TAF13 (ENSGEVG00005011104)	NEPRO (ENSGEVG00005011132)
Abingdon island giant tortoise	MODERN SPECIES	103										TIPRL (ENSCABG00000015719)	SFT2D2 (ENSCABG00000015703) #17	TBX19 (ENSCABG00000015701) #18	ENSCABG00000015699	DPT (ENSCABG00000015690) #21	ENSCABG00000015686	ATP1B1 (ENSCABG00000015666) #22	ENSCABG00000015662	BLZF1 (ENSCABG00000015629) #24	CCDC181 (ENSCABG00000015627) #25	SLC19A2 (ENSCABG00000015615) #26
Emydidae	ANCESTRAL SPECIES	36	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b.a	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT01010000222585	ENSGT00390000010760 #21	ENSGT00940000170848	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556.m #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000001083	ENSGT00390000018386.l	ENSGT00390000014496.`c	ENSGT00390000012981	ENSGT00390000007644	ENSGT00960000189323	ENSGT00940000158810
painted turtle	MODERN SPECIES		NIT2 (ENSCPBG00000003972)	TBC1D23 (ENSCPBG00000003949)	FILIP1L (ENSCPBG00000003934)	ENSCPBG00000003900	DCBLD2 (ENSCPBG00000003879)	COL8A1 (ENSCPBG00000003848)	ST3GAL6 (ENSCPBG00000003827)	ENSCPBG00000003807	TIPRL (ENSCPBG00000003799)	SFT2D2 (ENSCPBG00000003786) #17	TBX19 (ENSCPBG00000003775) #18	ENSCPBG00000003762	ENSCPBG00000003746	DPT (ENSCPBG00000003735) #21	ENSCPBG00000003717	ATP1B1 (ENSCPBG00000003701) #22	NME7 (ENSCPBG00000003681) #23	BLZF1 (ENSCPBG00000003665) #24	CCDC181 (ENSCPBG00000003648) #25	SLC19A2 (ENSCPBG00000003634) #26	ENSCPBG00000003474 #27	ENSCPBG00000003425 #27	ATG3 (ENSCPBG00000003393)	SLC35A5 (ENSCPBG00000003385)	ENSCPBG00000003370	GTPBP8 (ENSCPBG00000003342)	ENSCPBG00000003328	ENSCPBG00000003320	ENSCPBG00000003309	ENSCPBG00000003290	NEPRO (ENSCPBG00000003276)
Three-toed box turtle	MODERN SPECIES	272	FILIP1L (ENSTMTG00000017797)	CMSS1 (ENSTMTG00000017783)	ENSTMTG00000017778	DCBLD2 (ENSTMTG00000017602)	COL8A1 (ENSTMTG00000017566)	ST3GAL6 (ENSTMTG00000017537)	CPOX (ENSTMTG00000017520)	TTF2 (ENSTMTG00000017484)	GPR161 (ENSTMTG00000017466) #15	TIPRL (ENSTMTG00000017462)	SFT2D2 (ENSTMTG00000017448) #17	TBX19 (ENSTMTG00000017427) #18	ENSTMTG00000017416	DPT (ENSTMTG00000017406) #21	ENSTMTG00000017398	ATP1B1 (ENSTMTG00000017384) #22	NME7 (ENSTMTG00000017375) #23	BLZF1 (ENSTMTG00000017355) #24	CCDC181 (ENSTMTG00000017341) #25	SLC19A2 (ENSTMTG00000017108) #26
Chinese turtle	MODERN SPECIES	197														ENSPSIG00000002180	DPT (ENSPSIG00000002181) #21	ATP1B1 (ENSPSIG00000002188) #22	NME7 (ENSPSIG00000002195) #23	BLZF1 (ENSPSIG00000002198) #24	CCDC181 (ENSPSIG00000002204) #25	SLC19A2 (ENSPSIG00000002212) #26	F5 (ENSPSIG00000002220) #27	ATG3 (ENSPSIG00000002233)	SLC35A5 (ENSPSIG00000002236)	ENSPSIG00000002249	ENSPSIG00000002253	ENSPSIG00000002262	GTPBP8 (ENSPSIG00000002264)	TAF13 (ENSPSIG00000002283)	NEPRO (ENSPSIG00000002303)	BOC (ENSPSIG00000002314)	CFAP44 (ENSPSIG00000002319)
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00940000161699	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT01010000228889	ENSGT00390000007644	ENSGT00940000158810
tuatara	MODERN SPECIES	767															DPT (ENSSPUG00000004576) #21	ATP1B1 (ENSSPUG00000004598) #22	ENSSPUG00000004614 #23	ENSSPUG00000004625	BLZF1 (ENSSPUG00000004640) #24	CCDC181 (ENSSPUG00000004683) #25	SLC19A2 (ENSSPUG00000004884) #26	F5 (ENSSPUG00000004948) #27	ATG3 (ENSSPUG00000004994)	SLC35A5 (ENSSPUG00000005000)	ENSSPUG00000005013	ENSSPUG00000005031	GTPBP8 (ENSSPUG00000005036)	TAF13 (ENSSPUG00000005040)	ENSSPUG00000005045
Episquamata	ANCESTRAL SPECIES	2	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00940000161699	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749
Laterata	ANCESTRAL SPECIES	3	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000165376	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00940000161699	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00960000186749
Common wall lizard	MODERN SPECIES	12	CMSS1 (ENSPMRG00000008222)	ENSPMRG00000008208	ENSPMRG00000008207	DCBLD2 (ENSPMRG00000008188)	COL8A1 (ENSPMRG00000008184)	ST3GAL6 (ENSPMRG00000008174)	CPOX (ENSPMRG00000007650)	ENSPMRG00000007643	TTF2 (ENSPMRG00000007606)	GPR161 (ENSPMRG00000007574) #15	TIPRL (ENSPMRG00000007557)	SFT2D2 (ENSPMRG00000007544) #17	TBX19 (ENSPMRG00000007533) #18	ENSPMRG00000007525	DPT (ENSPMRG00000007514) #21	ATP1B1 (ENSPMRG00000007501) #22	NME7 (ENSPMRG00000007458) #23	BLZF1 (ENSPMRG00000007423) #24	CCDC181 (ENSPMRG00000007401) #25	SLC19A2 (ENSPMRG00000007385) #26	ENSPMRG00000007363 #27	ATG3 (ENSPMRG00000007341)	SLC35A5 (ENSPMRG00000007328)	ENSPMRG00000007302	ENSPMRG00000007282	GTPBP8 (ENSPMRG00000007269)	TAF13 (ENSPMRG00000007257)	NEPRO (ENSPMRG00000007244)	ENSPMRG00000007238	BOC (ENSPMRG00000007218)	ENSPMRG00000007207
Argentine black and white tegu	MODERN SPECIES		NIT2 (ENSSMRG00000004847)	TBC1D23 (ENSSMRG00000004868)	FILIP1L (ENSSMRG00000004893)	CMSS1 (ENSSMRG00000004997)	DCBLD2 (ENSSMRG00000005002)	COL8A1 (ENSSMRG00000005115)	ENSSMRG00000005122	ST3GAL6 (ENSSMRG00000005133)	CPOX (ENSSMRG00000005156)	ENSSMRG00000005162	GPR161 (ENSSMRG00000005168) #15	TIPRL (ENSSMRG00000005171)	SFT2D2 (ENSSMRG00000005175) #17	TBX19 (ENSSMRG00000005188) #18	DPT (ENSSMRG00000005211) #21	ATP1B1 (ENSSMRG00000005219) #22	NME7 (ENSSMRG00000005220) #23	BLZF1 (ENSSMRG00000005227) #24	CCDC181 (ENSSMRG00000005233) #25	SLC19A2 (ENSSMRG00000005241) #26	F5 (ENSSMRG00000005373) #27	ATG3 (ENSSMRG00000005384)	SLC35A5 (ENSSMRG00000005390)	CCDC80 (ENSSMRG00000005405)	ENSSMRG00000005409	GTPBP8 (ENSSMRG00000005412)	TAF13 (ENSSMRG00000005419)	NEPRO (ENSSMRG00000005420)	ENSSMRG00000005421	BOC (ENSSMRG00000005424)	ENSSMRG00000005428
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000157095	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00940000161699	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00940000164240
Lizard	MODERN SPECIES	2	TOMM70 (ENSACAG00000011389)	NIT2 (ENSACAG00000011321)	TBC1D23 (ENSACAG00000011149)	ENSACAG00000011125	CMSS1 (ENSACAG00000011065)	ENSACAG00000010985	COL8A1 (ENSACAG00000042462)	ENSACAG00000010891	ENSACAG00000010834	ENSACAG00000010769	TIPRL (ENSACAG00000010725)	SFT2D2 (ENSACAG00000010720) #17	TBX19 (ENSACAG00000010693) #18	ENSACAG00000041684	DPT (ENSACAG00000010681) #21	ATP1B1 (ENSACAG00000010651) #22	ENSACAG00000038299	NME7 (ENSACAG00000010597) #23	BLZF1 (ENSACAG00000010576) #24	CCDC181 (ENSACAG00000010560) #25	SLC19A2 (ENSACAG00000010527) #26	F5 (ENSACAG00000010312) #27	ATG3 (ENSACAG00000010261)	ENSACAG00000010242	ENSACAG00000029601	CCDC80 (ENSACAG00000010209)	ENSACAG00000010189	ENSACAG00000010177	NEPRO (ENSACAG00000010157)	ENSACAG00000010156	BOC (ENSACAG00000010110)
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000157095	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b.o.a #26	ENSGT00940000158556.l #27	ENSGT00940000158556.k #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00940000161555
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00940000157095	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b.o.a #26	ENSGT00940000158556.l #27	ENSGT00940000158556.k #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00940000161555
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00940000157095	ENSGT00550000074838	ENSGT00390000000191	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00940000158147	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000017311	ENSGT00940000162718	ENSGT00940000157829 #15	ENSGT00390000006659	ENSGT00390000018525.a.b #17	ENSGT00940000160000 #18	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b.o.a #26	ENSGT00940000158556.l #27	ENSGT00940000158556.k #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00390000014496	ENSGT00390000001083	ENSGT00390000012981	ENSGT00390000007644	ENSGT00940000158810	ENSGT00940000161555
Mainland tiger snake	MODERN SPECIES	161	TMEM45A (ENSNSUG00000010683)	TOMM70 (ENSNSUG00000010681)	NIT2 (ENSNSUG00000010680)	TBC1D23 (ENSNSUG00000010580)	FILIP1L (ENSNSUG00000010576)	CMSS1 (ENSNSUG00000010516)	DCBLD2 (ENSNSUG00000010515)	ENSNSUG00000010514	ST3GAL6 (ENSNSUG00000010512)	CPOX (ENSNSUG00000010479)	TTF2 (ENSNSUG00000010478)	GPR161 (ENSNSUG00000010477) #15	TIPRL (ENSNSUG00000010475)	SFT2D2 (ENSNSUG00000010470) #17	DPT (ENSNSUG00000010469) #21	ATP1B1 (ENSNSUG00000010468) #22	NME7 (ENSNSUG00000010467) #23	BLZF1 (ENSNSUG00000010462) #24	CCDC181 (ENSNSUG00000010460) #25	SLC19A2 (ENSNSUG00000010379) #26	F5 (ENSNSUG00000010299) #27	ATG3 (ENSNSUG00000010298)	SLC35A5 (ENSNSUG00000010215)	ENSNSUG00000010205	ENSNSUG00000010204	GTPBP8 (ENSNSUG00000010203)	TAF13 (ENSNSUG00000010202)	ENSNSUG00000010201	ENSNSUG00000010200	BOC (ENSNSUG00000010199)	CFAP44 (ENSNSUG00000010195)
Eastern brown snake	MODERN SPECIES	221										TTF2 (ENSPTXG00000016225)	GPR161 (ENSPTXG00000016222) #15	TIPRL (ENSPTXG00000016220)	SFT2D2 (ENSPTXG00000016216) #17	TBX19 (ENSPTXG00000016214) #18	DPT (ENSPTXG00000016211) #21	ATP1B1 (ENSPTXG00000016207) #22	NME7 (ENSPTXG00000016205) #23	BLZF1 (ENSPTXG00000016203) #24	CCDC181 (ENSPTXG00000016198) #25	ENSPTXG00000016197 #26	ENSPTXG00000013461 #27
Blue-lipped sea krait	MODERN SPECIES	189																ATP1B1 (ENSLLTG00000000019) #22
Indian cobra	MODERN SPECIES	4	TOMM70 (ENSNNAG00000009049)	NIT2 (ENSNNAG00000010059)	ENSNNAG00000010080	FILIP1L (ENSNNAG00000010102)	CMSS1 (ENSNNAG00000010241)	DCBLD2 (ENSNNAG00000011051)	COL8A1 (ENSNNAG00000011212)	ST3GAL6 (ENSNNAG00000011279)	CPOX (ENSNNAG00000011325)	ENSNNAG00000011384	GPR161 (ENSNNAG00000011859) #15	TIPRL (ENSNNAG00000011881)	SFT2D2 (ENSNNAG00000011908) #17	TBX19 (ENSNNAG00000011942) #18	DPT (ENSNNAG00000011976) #21	ATP1B1 (ENSNNAG00000012003) #22	NME7 (ENSNNAG00000012030) #23	BLZF1 (ENSNNAG00000012062) #24	CCDC181 (ENSNNAG00000003082) #25	SLC19A2 (ENSNNAG00000003157) #26	ENSNNAG00000003298 #27	ENSNNAG00000003365 #27	ATG3 (ENSNNAG00000003760)	SLC35A5 (ENSNNAG00000003813)	ENSNNAG00000004081	ENSNNAG00000004167	GTPBP8 (ENSNNAG00000004183)	TAF13 (ENSNNAG00000004207)	ENSNNAG00000004230	ENSNNAG00000004261	BOC (ENSNNAG00000004283)
Anura	ANCESTRAL SPECIES	94														ENSGT00940000157829 #15	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00950000183022.a.b #26	ENSGT00940000158556 #27	ENSGT00390000010308	ENSGT00950000182827.A	ENSGT00940000164470	ENSGT00940000155202	ENSGT00940000154517	ENSGT00530000063528.B	ENSGT00940000166930	ENSGT00940000166107	ENSGT00940000160514.i	ENSGT00940000155600.b
Frog	MODERN SPECIES	2	hipk1 (ENSXETG00000001698)	ENSXETG00000041605	rab44 (ENSXETG00000041440)	cdkn1a (ENSXETG00000024887)	srsf3 (ENSXETG00000001701)	ENSXETG00000041500	adora1 (ENSXETG00000001702)	myog (ENSXETG00000001704)	tmem183a (ENSXETG00000002408)	ENSXETG00000047138	ENSXETG00000034982	sirt2 (ENSXETG00000002409)	gpr161 (ENSXETG00000002410) #15	dpt (ENSXETG00000002411) #21	ENSXETG00000045586	atp1b1 (ENSXETG00000002414) #22	nme7 (ENSXETG00000002417) #23	blzf1 (ENSXETG00000002419) #24	ENSXETG00000039595	ENSXETG00000047446	slc19a2 (ENSXETG00000002422) #26	ENSXETG00000047971	f5 (ENSXETG00000002423) #27	atg3 (ENSXETG00000002424)	ENSXETG00000044899	slc35a5 (ENSXETG00000002426)	ccdc80 (ENSXETG00000002427)	ENSXETG00000045244	kdm6a (ENSXETG00000004822)	fundc1 (ENSXETG00000004831)	efhc2 (ENSXETG00000004835)
Leishan spiny toad	MODERN SPECIES	5	STS (ENSLLEG00000004248)	ENSLLEG00000000248	ENSLLEG00000000257	ENSLLEG00000000263	ENSLLEG00000000279	PNPLA4 (ENSLLEG00000000298)	ENSLLEG00000000314	ANOS1 (ENSLLEG00000000341)	ENSLLEG00000000368	GPR143 (ENSLLEG00000000400)	GPR161 (ENSLLEG00000000457) #15	ENSLLEG00000000464	DPT (ENSLLEG00000000472) #21	ENSLLEG00000000487	ENSLLEG00000000495	ATP1B1 (ENSLLEG00000000513) #22	NME7 (ENSLLEG00000000587) #23	BLZF1 (ENSLLEG00000000841) #24	CCDC181 (ENSLLEG00000000896) #25	SLC19A2 (ENSLLEG00000000946) #26	F5 (ENSLLEG00000001022) #27	ATG3 (ENSLLEG00000001200)	SLC35A5 (ENSLLEG00000001280)	ENSLLEG00000001312	ENSLLEG00000001355	ENSLLEG00000001361	ENSLLEG00000001459	ENSLLEG00000001922	EFHC2 (ENSLLEG00000001969)	ENSLLEG00000002039	ENSLLEG00000002069
Coelacanth	MODERN SPECIES	384				ENSLACG00000000796	ARL6 (ENSLACG00000001976)	ENSLACG00000004092	RIOX2 (ENSLACG00000005774)	TIPRL (ENSLACG00000006272)	INTS10 (ENSLACG00000006851)	ENSLACG00000007489 #26	GPR161 (ENSLACG00000008204) #15	DCAF6 (ENSLACG00000008499) #13	MPC2 (ENSLACG00000010937) #12	DPT (ENSLACG00000013000) #21	ENSLACG00000013853	ATP1B1 (ENSLACG00000014205) #22	NME7 (ENSLACG00000014441) #23	BLZF1 (ENSLACG00000015633) #24	CCDC181 (ENSLACG00000015731) #25	CPOX (ENSLACG00000015896)	GABRR3 (ENSLACG00000016035)	F5 (ENSLACG00000016237) #27	ATG3 (ENSLACG00000016562)	SLC35A5 (ENSLACG00000016660)	ccdc80 (ENSLACG00000016701)	ENSLACG00000016850	ENSLACG00000017293
Actinopterygii	ANCESTRAL SPECIES	3	ENSGT00940000160782	ENSGT00940000166930	ENSGT00530000063528.B	ENSGT00940000154517	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470	ENSGT00950000182827.A	ENSGT00390000010308	ENSGT00940000158556 #27	ENSGT00950000183022.a.b #26	ENSGT00940000157829 #15	ENSGT00950000182900.C #13	ENSGT00510000047120 #12	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00390000009400 #24	ENSGT00390000018244 #25	ENSGT00390000017311	ENSGT00940000158538	ENSGT00940000163254	ENSGT00530000063484.b.b	ENSGT00940000154342.C	ENSGT00940000159499	ENSGT01090000260434	ENSGT01000000214434.B.b	ENSGT00590000083134.a.a	ENSGT00940000160941	ENSGT00390000016655.a.a.b	ENSGT00940000169295
Neopterygii	ANCESTRAL SPECIES	13	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470	ENSGT00950000182827.A	ENSGT00390000010308	ENSGT00940000158556 #27	ENSGT00950000183022.a.b #26	ENSGT00940000157829 #15	ENSGT00950000182900.C #13	ENSGT00510000047120 #12	ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000157237	ENSGT00940000158737	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Osteoglossocephalai	ANCESTRAL SPECIES	3	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470	ENSGT00950000182827.A	ENSGT00390000010308	ENSGT00940000158556 #27	ENSGT00950000183022.a.b #26	ENSGT00940000157829 #15	ENSGT00950000182900.C #13	ENSGT00510000047120.fb #12	ENSGT00390000010760.f #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000157237	ENSGT00940000158737	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	124	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.ob	ENSGT00940000155202.b	ENSGT00520000055625.a	ENSGT00940000164470.c	ENSGT00950000182827.A	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00940000157829 #15	ENSGT00950000182900.C #13	ENSGT00510000047120.gb #12	ENSGT00390000010760.f.a #21	ENSGT01030000234579.C.i #22	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a.eb	ENSGT00940000157237	ENSGT00940000158737	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A.a	ENSGT00940000156234	ENSGT00940000155607.kc	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651.a
Asian bonytongue	MODERN SPECIES		EN1 (ENSSFOG00015029193)	mao (ENSSFOG00015007913)	ENSSFOG00015007890	efhc2 (ENSSFOG00015026506)	fundc1 (ENSSFOG00015007820)	ENSSFOG00015007703	DIPK2B (ENSSFOG00015007695)	ENSSFOG00015007681	slc35a5 (ENSSFOG00015024319)	atg3 (ENSSFOG00015007610)	ENSSFOG00015007562 #26	gpr161b (ENSSFOG00015030679) #15	dcaf6 (ENSSFOG00015007509) #13	MPC2 (ENSSFOG00015007472) #12	dpt (ENSSFOG00015007450) #21	atp1b1b (ENSSFOG00015007427) #22	zgc:172121 (ENSSFOG00015007372)	BIVM (ENSSFOG00015026667)	si:ch211-201h21.5 (ENSSFOG00015030276)	TMEM131 (ENSSFOG00015007016)	ENSSFOG00015032039	ENSSFOG00015006964	CNGA3 (ENSSFOG00015006893)	ube3a (ENSSFOG00015006861)	ATP10A (ENSSFOG00015006790)	GABRB3 (ENSSFOG00015006754)	GABRA5 (ENSSFOG00015006720)	GABRG3 (ENSSFOG00015006679)	OCA2 (ENSSFOG00015006599)	HERC2 (ENSSFOG00015006364)	nipa1 (ENSSFOG00015026378)
P. kingsleyae	MODERN SPECIES	64	ENSPKIG00000003469	CASK (ENSPKIG00000003420)	mao (ENSPKIG00000003367)	ENSPKIG00000003340	efhc2 (ENSPKIG00000003303)	fundc1 (ENSPKIG00000003268)	ENSPKIG00000003212	ENSPKIG00000003176	slc35a5 (ENSPKIG00000003144)	atg3 (ENSPKIG00000003083)	SLC19A2 (ENSPKIG00000003038) #26	gpr161b (ENSPKIG00000002988) #15	dcaf6 (ENSPKIG00000002944) #13	mpc2a (ENSPKIG00000002913) #12	dpt (ENSPKIG00000002873) #21	atp1b1b (ENSPKIG00000002842) #22	zgc:172121 (ENSPKIG00000002811)	BIVM (ENSPKIG00000002784)	si:ch211-201h21.5 (ENSPKIG00000002759)	TMEM131 (ENSPKIG00000002555)	ENSPKIG00000023414	ENSPKIG00000023366	CNGA3 (ENSPKIG00000023349)	ube3a (ENSPKIG00000023315)	ATP10A (ENSPKIG00000023262)	GABRB3 (ENSPKIG00000023229)	GABRA5 (ENSPKIG00000023202)	GABRG3 (ENSPKIG00000023170)	OCA2 (ENSPKIG00000023109)	HERC2 (ENSPKIG00000022987)	nipa1 (ENSPKIG00000022922)
Osteoglossiformes	ANCESTRAL SPECIES	247	ENSGT00520000055993	ENSGT00940000154287.a	ENSGT00940000154659.a.a	ENSGT00390000001021.t	ENSGT00940000155375.f	ENSGT00940000153244.B.c	ENSGT00940000154443.j	ENSGT01060000248589.C.e.a	ENSGT00940000155600.b.a	ENSGT00940000154517.pb	ENSGT00940000155202.a	ENSGT00940000164470.d	ENSGT00940000158556 #27	ENSGT00510000047120.fb #12	ENSGT00390000010760.f.b #21	ENSGT01030000234579.C.j #22	ENSGT00940000158946 #23	ENSGT00530000063614.a.a.db	ENSGT00940000154713.A.b	ENSGT00940000155607.lc
Asian bonytongue	MODERN SPECIES	5	ENSSFOG00015007265	PPP2R3B (ENSSFOG00015007279)	med14 (ENSSFOG00015007326)	usp9 (ENSSFOG00015007438)	ENSSFOG00015007556	ENSSFOG00015007587	CASK (ENSSFOG00015007673)	gpr34b (ENSSFOG00015008026)	ENSSFOG00015026661	ENSSFOG00015008078	ENSSFOG00015008293	ENSSFOG00015008390	f5 (ENSSFOG00015008496) #27	mpc2b (ENSSFOG00015026524) #12	dpt (ENSSFOG00015008790) #21	ATP1B1 (ENSSFOG00015033062) #22	nme7 (ENSSFOG00015008849) #23	ENSSFOG00015008878	CNGA3 (ENSSFOG00015008889)	GABRB3 (ENSSFOG00015008918)	GABRG3 (ENSSFOG00015008960)	nipa2 (ENSSFOG00015009004)	ENSSFOG00015009035	CHST7 (ENSSFOG00015009047)	rp2 (ENSSFOG00015009056)	jade3 (ENSSFOG00015009085)	ENSSFOG00015009107	tbc1d23 (ENSSFOG00015009132)	ENSSFOG00015009204	clcn4 (ENSSFOG00015009217)	cldn33b (ENSSFOG00015009240)
P. kingsleyae	MODERN SPECIES	304	P2RY8 (ENSPKIG00000003750)	ENSPKIG00000003767	shox (ENSPKIG00000003797)	PPP2R3B (ENSPKIG00000003851)	med14 (ENSPKIG00000003945)	usp9 (ENSPKIG00000004071)	rpl8 (ENSPKIG00000004287)	ENSPKIG00000004320	CASK (ENSPKIG00000004410)	ENSPKIG00000004561	ENSPKIG00000004677	ENSPKIG00000005013	ENSPKIG00000005029	f5 (ENSPKIG00000005082) #27	mpc2b (ENSPKIG00000005183) #12	ATP1B1 (ENSPKIG00000005219) #22	dpt (ENSPKIG00000005260) #21	nme7 (ENSPKIG00000005301) #23	ENSPKIG00000005362	GABRB3 (ENSPKIG00000005448)
Clupeocephala	ANCESTRAL SPECIES	99														ENSGT00950000186445	ENSGT00390000010760.f #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000157237	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	228														ENSGT00950000186445	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000157237	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Otophysi	ANCESTRAL SPECIES	32	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00390000000191.l	ENSGT00940000157095	ENSGT00390000008285	ENSGT00390000018446.a	ENSGT00940000156166.a.i.b	ENSGT00940000153846.a.a.d	ENSGT00950000183210.g.a.a	ENSGT00390000006452.b.b.g	ENSGT00900000141090	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00980000198724	ENSGT00940000164867.b	ENSGT00940000159265
Characiphysae	ANCESTRAL SPECIES	2	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00390000000191.l	ENSGT00940000157095	ENSGT00390000008285	ENSGT00390000018446.a	ENSGT00940000156166.a.i.b	ENSGT00940000153846.a.a.d	ENSGT00950000183210.g.a.a	ENSGT00390000006452.b.b.g	ENSGT00900000141090	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00980000198724	ENSGT00940000164867.b	ENSGT00940000159265
Channel catfish	MODERN SPECIES	2	smx5 (ENSIPUG00000010539)	bcl6 (ENSIPUG00000010505)	lpp (ENSIPUG00000010396)	TPRG1L (ENSIPUG00000010351)	tp63 (ENSIPUG00000010314)	tbc1d23 (ENSIPUG00000010243)	tomm70 (ENSIPUG00000010157)	c11h1orf146 (ENSIPUG00000010133)	glmnb (ENSIPUG00000010098)	gfi1ab (ENSIPUG00000010071)	evi5 (ENSIPUG00000009873)	rpl5b (ENSIPUG00000009689)	DIPK1A (ENSIPUG00000009639)	zbtb11 (ENSIPUG00000009604)	dpt (ENSIPUG00000009582) #21	atp1b1a (ENSIPUG00000009526) #22	nme7 (ENSIPUG00000009418) #23	zgc:172121 (ENSIPUG00000009391)	bivm (ENSIPUG00000009377)	si:ch211-201h21.5 (ENSIPUG00000009356)	tmem131 (ENSIPUG00000009232)	ACTL6A (ENSIPUG00000009096)	mrpl47 (ENSIPUG00000009200)	ndufb5 (ENSIPUG00000009024)	usp13 (ENSIPUG00000008925)	pex5l (ENSIPUG00000008840)	PDE6D (ENSIPUG00000008807)	ENSIPUG00000008784	ptmaa (ENSIPUG00000008760)	dlg1a (ENSIPUG00000008544)	MFI2 (ENSIPUG00000008433)
Characiphysae_b	ANCESTRAL SPECIES		ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00390000000191.l	ENSGT00940000157095	ENSGT00390000008285	ENSGT00390000018446.a	ENSGT00940000156166.a.i.b	ENSGT00940000153846.a.a.d	ENSGT00950000183210.g.a.a	ENSGT00390000006452.b.b.g	ENSGT00900000141090	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00980000198724	ENSGT00940000164867.b	ENSGT00940000159265
Characoidei	ANCESTRAL SPECIES		ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00390000000191.l	ENSGT00940000157095	ENSGT00390000008285	ENSGT00390000018446.a	ENSGT00940000156166.a.i.b	ENSGT00940000153846.a.a.d	ENSGT00950000183210.g.a.a	ENSGT00390000006452.b.b.g	ENSGT00900000141090	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00980000198724	ENSGT00940000164867.b	ENSGT00940000159265
Red-bellied piranha	MODERN SPECIES	54	bcl6aa (ENSPNAG00000005219)	lpp (ENSPNAG00000006107)	ENSPNAG00000005275	tprg1 (ENSPNAG00000006916)	tp63 (ENSPNAG00000027569)	tbc1d23 (ENSPNAG00000027529)	tomm70a (ENSPNAG00000027449)	C1orf146 (ENSPNAG00000006150)	glmnb (ENSPNAG00000027342)	gfi1ab (ENSPNAG00000027258)	EVI5 (ENSPNAG00000027233)	rpl5b (ENSPNAG00000004187)	DIPK1A (ENSPNAG00000027122)	zbtb11 (ENSPNAG00000027087)	dpt (ENSPNAG00000027075) #21	atp1b1a (ENSPNAG00000027045) #22	nme7 (ENSPNAG00000005268) #23	zgc:172121 (ENSPNAG00000005724)	BIVM (ENSPNAG00000026906)	si:ch211-201h21.5 (ENSPNAG00000005032)	TMEM131 (ENSPNAG00000026787)	actl6a (ENSPNAG00000026758)	mrpl47 (ENSPNAG00000026692)	ndufb5 (ENSPNAG00000007145)	usp13 (ENSPNAG00000026639)	PEX5L (ENSPNAG00000026476)	pde6d (ENSPNAG00000026438)	phb2b (ENSPNAG00000004048)	ENSPNAG00000026360	ptmaa (ENSPNAG00000026323)	dlg1a (ENSPNAG00000026060)
Mexicana tetra	MODERN SPECIES	171						tomm70a (ENSAMXG00000004840)	C1orf146 (ENSAMXG00000004838)	glmnb (ENSAMXG00000004836)	gfi1ab (ENSAMXG00000039600)	ENSAMXG00000038279	EVI5 (ENSAMXG00000004833)	rpl5b (ENSAMXG00000004832)	DIPK1A (ENSAMXG00000044089)	zbtb11 (ENSAMXG00000011813)	dpt (ENSAMXG00000042958) #21	atp1b1a (ENSAMXG00000036612) #22	ENSAMXG00000034041	ENSAMXG00000038001	nme7 (ENSAMXG00000011837) #23	zgc:172121 (ENSAMXG00000011842)	BIVM (ENSAMXG00000011848)	si:ch211-201h21.5 (ENSAMXG00000035927)	TMEM131 (ENSAMXG00000011864)	actl6a (ENSAMXG00000011893)	mrpl47 (ENSAMXG00000011888)	ndufb5 (ENSAMXG00000037596)	usp13 (ENSAMXG00000011904)	ENSAMXG00000034911	ENSAMXG00000029679	PEX5L (ENSAMXG00000011906)	ENSAMXG00000034283
Electric eel	MODERN SPECIES	44	inka1b (ENSEEEG00000006278)	ENSEEEG00000006267	sema3fa (ENSEEEG00000006257)	ENSEEEG00000006254	ENSEEEG00000006252	CAMKV (ENSEEEG00000006250)	ENSEEEG00000006245	gnat1 (ENSEEEG00000006224)	edem1 (ENSEEEG00000006203)	arl8ba (ENSEEEG00000006128)	EVI5 (ENSEEEG00000006126)	rpl5b (ENSEEEG00000005858)	DIPK1A (ENSEEEG00000005839)	zbtb11 (ENSEEEG00000005836)	dpt (ENSEEEG00000005835) #21	atp1b1a (ENSEEEG00000005834) #22
Cyprinoidei	ANCESTRAL SPECIES	2	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00390000000191.l	ENSGT00940000157095	ENSGT00390000008285	ENSGT00390000018446.a	ENSGT00940000156166.a.i.b	ENSGT00940000153846.a.a.d	ENSGT00950000183210.g.a.a	ENSGT00390000006452.b.b.g	ENSGT00900000141090	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00980000198724	ENSGT00940000164867.b	ENSGT00940000159265
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	41	ENSGT00390000016597	ENSGT00940000156311.b.a.g	ENSGT00940000156022.b.g	ENSGT00390000001652.f.b.c	ENSGT00950000183153.c.b.a.a.e.a	ENSGT00390000000191.l.a	ENSGT00940000157095.c	ENSGT00390000008285.c	ENSGT00390000018446.a.b	ENSGT00940000156166.a.i.b.c.a	ENSGT00940000153846.a.a.d.b	ENSGT00950000183210.g.a.a.a	ENSGT00390000006452.b.b.g.a	ENSGT00900000141090.n	ENSGT00390000010760.f.d #21	ENSGT01030000234579.C.k.a.a #22	ENSGT00940000158946.c #23	ENSGT00510000049619.b	ENSGT00510000048601.a.m	ENSGT00940000166460.d	ENSGT00530000063614.a.a.xb	ENSGT00940000156305.m	ENSGT00390000009980.g.b	ENSGT00940000157401.d	ENSGT00940000155931.a.a	ENSGT00390000000263.i.a.a	ENSGT00950000183070.a.a.mb.b.h.b	ENSGT00980000198724	ENSGT00940000164867.b.t	ENSGT00940000159265.b	ENSGT00940000156968.m
Goldfish	MODERN SPECIES	24	LSM2 (ENSCARG00000069139)	bcl6aa (ENSCARG00000069133)	lpp (ENSCARG00000069118)	tprg1 (ENSCARG00000069108)	tp63 (ENSCARG00000068357)	tbc1d23 (ENSCARG00000068136)	tomm70a (ENSCARG00000067955)	C1orf146 (ENSCARG00000067925)	glmnb (ENSCARG00000067898)	gfi1ab (ENSCARG00000067884)	EVI5 (ENSCARG00000067652)	rpl5b (ENSCARG00000067626)	DIPK1A (ENSCARG00000067616)	zbtb11 (ENSCARG00000067542)	dpt (ENSCARG00000067530) #21	atp1b1a (ENSCARG00000067515) #22	nme7 (ENSCARG00000067427) #23	zgc:172121 (ENSCARG00000067403)	BIVM (ENSCARG00000067375)	si:ch211-201h21.5 (ENSCARG00000067367)	TMEM131 (ENSCARG00000067064)	ACTL6A (ENSCARG00000066963)	ndufb5 (ENSCARG00000066950)	usp13 (ENSCARG00000066836)	PEX5L (ENSCARG00000066782)	pde6d (ENSCARG00000066742)	phb2b (ENSCARG00000066629)	ENSCARG00000066606	dlg1a (ENSCARG00000061653)	ENSCARG00000061347	LRRC7 (ENSCARG00000059223)
Cyprininae_a	ANCESTRAL SPECIES	10	ENSGT00390000016597	ENSGT00940000156311.b.a.g	ENSGT00940000156022.b.g	ENSGT00390000001652.f.b.c	ENSGT00950000183153.c.b.a.a.e.a	ENSGT00390000000191.l.a	ENSGT00940000157095.c	ENSGT00390000008285.c	ENSGT00390000018446.a.b	ENSGT00940000156166.a.i.b.c.a	ENSGT00940000153846.a.a.d.b	ENSGT00950000183210.g.a.a.a	ENSGT00390000006452.b.b.g.a	ENSGT00900000141090.n.a	ENSGT00390000010760.f.d #21	ENSGT01030000234579.C.k.a.a #22	ENSGT00940000158946.c #23	ENSGT00510000049619.b	ENSGT00510000048601.a.m	ENSGT00940000166460.d	ENSGT00530000063614.a.a.xb	ENSGT00940000156305.n.b	ENSGT00390000009980.g.b	ENSGT00940000157401.d	ENSGT00940000155931.a.a	ENSGT00390000000263.i.a.a	ENSGT00950000183070.a.a.mb.b.h.b	ENSGT00980000198724	ENSGT00940000164867.b.t	ENSGT00940000159265.b	ENSGT00940000156968.m
Common carp reference	MODERN SPECIES	16	bcl6aa (ENSCCRG00000016321)	lpp (ENSCCRG00000058129)	ENSCCRG00000081413	tprg1 (ENSCCRG00000039868)	tp63 (ENSCCRG00000011306)	tbc1d23 (ENSCCRG00000011137)	tomm70a (ENSCCRG00000068468)	ENSCCRG00000013474	glmnb (ENSCCRG00000013476)	EVI5 (ENSCCRG00000065334)	rpl5b (ENSCCRG00000029305)	DIPK1A (ENSCCRG00000060017)	zbtb11 (ENSCCRG00000029272)	nme7 (ENSCCRG00000029218) #23	dpt (ENSCCRG00000082064) #21	atp1b1a (ENSCCRG00000061614) #22	zgc:172121 (ENSCCRG00000061445)	ENSCCRG00000048872	si:ch211-201h21.5 (ENSCCRG00000048868)	ENSCCRG00000047419	actl6a (ENSCCRG00000036950)	ndufb5 (ENSCCRG00000061361)	usp13 (ENSCCRG00000024629)	PEX5L (ENSCCRG00000064819)	pde6d (ENSCCRG00000070951)	phb2b (ENSCCRG00000037333)	ptmaa (ENSCCRG00000080418)	dlg1a (ENSCCRG00000037322)	ENSCCRG00000023992	ENSCCRG00000051679	lrrc40 (ENSCCRG00000068853)
Golden-line barbel	MODERN SPECIES	351	nln (ENSSGRG00000048263)	sgtb (ENSSGRG00000048242)	trappc13 (ENSSGRG00000047992)	pum3 (ENSSGRG00000047957)	ENSSGRG00000047953	vldlr (ENSSGRG00000046000)	ENSSGRG00000045986	ENSSGRG00000045985	spp1 (ENSSGRG00000045984)	ENSSGRG00000045982	CLDN23 (ENSSGRG00000045981)	cldn23.1 (ENSSGRG00000045980)	ENSSGRG00000045978	ENSSGRG00000045974	dpt (ENSSGRG00000045971) #21	atp1b1a (ENSSGRG00000045970) #22	nme7 (ENSSGRG00000045902) #23	zgc:172121 (ENSSGRG00000045898)	TMEM131 (ENSSGRG00000045544)	actl6a (ENSSGRG00000045146)	mrpl47 (ENSSGRG00000045138)	usp13 (ENSSGRG00000045083)	PEX5L (ENSSGRG00000045080)
Cyprininae	ANCESTRAL SPECIES																	ENSGT01030000234579.C.k.a.b #22
Cyprininae_a	ANCESTRAL SPECIES	23	ENSGT00940000156022.b.h	ENSGT00390000001652.f.b.d	ENSGT00950000183153.c.b.a.a.e.b	ENSGT00390000000191.l.b	ENSGT00940000157095.d	ENSGT00390000008285.d	ENSGT00390000018446.a.a	ENSGT00940000156166.a.i.b.d	ENSGT00940000153846.a.a.d.a	ENSGT00950000183210.g.a.a.b	ENSGT00390000006452.b.b.g.b	ENSGT00900000141090.n.b	ENSGT00390000010760.f.c #21	ENSGT01030000234579.C.k.b #22	ENSGT00940000166950	ENSGT01030000234579.C.k.a.b #22	ENSGT00940000158946.d #23	ENSGT00510000049619.a	ENSGT00510000048601.a.n	ENSGT00940000166460.c	ENSGT00530000063614.a.a.wb	ENSGT00940000156305.n.a	ENSGT00390000002837	ENSGT00390000009980.g.a	ENSGT00940000157401.c	ENSGT00940000155931.a.b	ENSGT00390000000263.j	ENSGT00950000183070.a.a.mb.b.h.a	ENSGT00940000164867.b.u	ENSGT00940000159265.a	ENSGT00940000156968.n
Golden-line barbel	MODERN SPECIES	130	MYO7B (ENSSGRG00000019273)	GPR17 (ENSSGRG00000019272)	ENSSGRG00000019251	bcl6aa (ENSSGRG00000019230)	lpp (ENSSGRG00000019214)	tprg1 (ENSSGRG00000019210)	tp63 (ENSSGRG00000018787)	tbc1d23 (ENSSGRG00000018242)	tomm70a (ENSSGRG00000017897)	glmnb (ENSSGRG00000017896)	EVI5 (ENSSGRG00000017878)	rpl5b (ENSSGRG00000017874)	DIPK1A (ENSSGRG00000017857)	zbtb11 (ENSSGRG00000017854)	dpt (ENSSGRG00000017853) #21	atp1b1a (ENSSGRG00000017850) #22	nme7 (ENSSGRG00000017833) #23	zgc:172121 (ENSSGRG00000017832)	si:ch211-201h21.5 (ENSSGRG00000017826)	BIVM (ENSSGRG00000017816)	TMEM131 (ENSSGRG00000017812)	actl6a (ENSSGRG00000017444)	mrpl47 (ENSSGRG00000017432)	ndufb5 (ENSSGRG00000017425)	usp13 (ENSSGRG00000017413)	PEX5L (ENSSGRG00000017405)	pde6d (ENSSGRG00000017400)	phb2b (ENSSGRG00000017392)	ptmaa (ENSSGRG00000017391)	dlg1a (ENSSGRG00000015001)	MELTF (ENSSGRG00000014988)
Cyprininae	ANCESTRAL SPECIES	12	ENSGT01100000263537.b.a.a.b.a.f	ENSGT00940000156202.a.f	ENSGT00940000156311.b.a.h	ENSGT00940000156022.b.h	ENSGT00390000001652.f.b.d	ENSGT00950000183153.c.b.a.a.e.b	ENSGT00390000000191.l.b	ENSGT00940000157095.d	ENSGT00390000008285.d	ENSGT00390000018446.a.a	ENSGT00940000156166.a.i.b.d	ENSGT00940000153846.a.a.d.a	ENSGT00950000183210.g.a.a.b	ENSGT00390000006452.b.b.g.b	ENSGT00390000010760.f.c #21	ENSGT01030000234579.C.k.b #22	ENSGT00940000158946.d #23	ENSGT00510000049619.a	ENSGT00510000048601.a.n	ENSGT00940000166460.c	ENSGT00530000063614.a.a.wb	ENSGT00940000156305.n.a	ENSGT00390000002837	ENSGT00390000009980.g.a	ENSGT00940000157401.c	ENSGT00940000155931.a.b	ENSGT00390000000263.j	ENSGT00950000183070.a.a.mb.b.h.a	ENSGT00940000164867.b.u	ENSGT00940000159265.a	ENSGT00940000156968.n
Goldfish	MODERN SPECIES	46	INPP5D (ENSCARG00000019090)	LSM2 (ENSCARG00000020328)	bcl6aa (ENSCARG00000020344)	lpp (ENSCARG00000020387)	tprg1 (ENSCARG00000020410)	tp63 (ENSCARG00000020523)	tbc1d23 (ENSCARG00000023010)	ENSCARG00000023812	gfi1ab (ENSCARG00000023817)	EVI5 (ENSCARG00000023843)	rpl5b (ENSCARG00000024020)	DIPK1A (ENSCARG00000024043)	ENSCARG00000024130	TMEM131 (ENSCARG00000024215)	dpt (ENSCARG00000026349) #21	atp1b1a (ENSCARG00000026358) #22	nme7 (ENSCARG00000000194) #23	zgc:172121 (ENSCARG00000000230)	BIVM (ENSCARG00000000259)	si:ch211-201h21.5 (ENSCARG00000000279)	actl6a (ENSCARG00000000347)	mrpl47 (ENSCARG00000000396)	ndufb5 (ENSCARG00000000403)	usp13 (ENSCARG00000000499)	PEX5L (ENSCARG00000000856)	ENSCARG00000000870	pde6d (ENSCARG00000000879)	phb2b (ENSCARG00000000905)	ENSCARG00000000944	dlg1a (ENSCARG00000000979)	ENSCARG00000001054
Cyprininae_a	ANCESTRAL SPECIES	23	ENSGT00940000156202.a.f	ENSGT00940000156311.b.a.h	ENSGT00940000156022.b.h	ENSGT00390000001652.f.b.d	ENSGT00950000183153.c.b.a.a.e.b	ENSGT00390000000191.l.b	ENSGT00940000157095.d	ENSGT00390000008285.d	ENSGT00390000018446.a.a	ENSGT00940000156166.a.i.b.d	ENSGT00940000153846.a.a.d.a	ENSGT00950000183210.g.a.a.b	ENSGT00390000006452.b.b.g.b	ENSGT00900000141090.n.b	ENSGT00390000010760.f.c #21	ENSGT01030000234579.C.k.b #22	ENSGT00940000166950	ENSGT01030000234579.C.k.a.b #22	ENSGT00940000158946.d #23	ENSGT00510000049619.a	ENSGT00510000048601.a.n	ENSGT00940000166460.c	ENSGT00530000063614.a.a.wb	ENSGT00940000156305.n.a	ENSGT00390000002837	ENSGT00390000009980.g.a	ENSGT00940000157401.c	ENSGT00940000155931.a.b	ENSGT00390000000263.j	ENSGT00950000183070.a.a.mb.b.h.a	ENSGT00940000164867.b.u
Common carp reference	MODERN SPECIES	10	ENSCCRG00000030619	bcl6aa (ENSCCRG00000029746)	lpp (ENSCCRG00000003617)	tprg1 (ENSCCRG00000037071)	tp63 (ENSCCRG00000038305)	tbc1d23 (ENSCCRG00000011457)	tomm70a (ENSCCRG00000011556)	ENSCCRG00000073892	glmnb (ENSCCRG00000024676)	gfi1ab (ENSCCRG00000021712)	EVI5 (ENSCCRG00000013487)	rpl5b (ENSCCRG00000029284)	DIPK1A (ENSCCRG00000029301)	zbtb11 (ENSCCRG00000007686)	dpt (ENSCCRG00000048884) #21	atp1b1a (ENSCCRG00000067632) #22	ENSCCRG00000048875	zgc:172121 (ENSCCRG00000080287)	ENSCCRG00000048896	si:ch211-201h21.5 (ENSCCRG00000048894)	ENSCCRG00000048890	actl6a (ENSCCRG00000024746)	mrpl47 (ENSCCRG00000024741)	ndufb5 (ENSCCRG00000024735)	usp13 (ENSCCRG00000081978)	PEX5L (ENSCCRG00000025069)	pde6d (ENSCCRG00000022653)	phb2b (ENSCCRG00000022636)	dlg1a (ENSCCRG00000031528)	ENSCCRG00000069427	lrrc40 (ENSCCRG00000023944)
Zebrafish	MODERN SPECIES	21	LSM2 (ENSDARG00000103066)	bcl6aa (ENSDARG00000070864)	lpp (ENSDARG00000023578)	ENSDARG00000114184	tprg1 (ENSDARG00000056026)	tp63 (ENSDARG00000044356)	tbc1d23 (ENSDARG00000044357)	tomm70a (ENSDARG00000029639)	glmnb (ENSDARG00000010958)	gfi1ab (ENSDARG00000044457)	EVI5 (ENSDARG00000070839)	rpl5b (ENSDARG00000015862)	DIPK1A (ENSDARG00000061362)	zbtb11 (ENSDARG00000017886)	dpt (ENSDARG00000056178) #21	atp1b1a (ENSDARG00000013144) #22	nme7 (ENSDARG00000056193) #23	zgc:172121 (ENSDARG00000034430)	BIVM (ENSDARG00000061409)	si:ch211-201h21.5 (ENSDARG00000056203)	TMEM131 (ENSDARG00000056259)	actl6a (ENSDARG00000070828)	mrpl47 (ENSDARG00000075743)	ndufb5 (ENSDARG00000070824)	usp13 (ENSDARG00000079198)	PEX5L (ENSDARG00000022518)	pde6d (ENSDARG00000074892)	phb2b (ENSDARG00000017728)	ptmaa (ENSDARG00000021113)	dlg1a (ENSDARG00000009677)	MELTF (ENSDARG00000075159)
Clupeiformes	ANCESTRAL SPECIES	111														ENSGT00950000186445	ENSGT00390000010760.f #21	ENSGT01030000234579.C.k #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00940000155751.a	ENSGT00950000182917.a.b.a	ENSGT00730000110988.wb.b.f	ENSGT00940000160194	ENSGT00940000154831	ENSGT00940000161649	ENSGT00940000157399
Atlantic herring	MODERN SPECIES	1	rorca (ENSCHAG00000027469)	sh3gl1b (ENSCHAG00000027470)	mpnd (ENSCHAG00000027478)	stap2b (ENSCHAG00000027492)	fsd1 (ENSCHAG00000027494)	ENSCHAG00000000387 #25	cpox (ENSCHAG00000000436)	prrg1 (ENSCHAG00000000469)	tmem47 (ENSCHAG00000000511)	ENSCHAG00000000543	tab3 (ENSCHAG00000000768)	ENSCHAG00000001003	ENSCHAG00000001046	ENSCHAG00000001063	dpt (ENSCHAG00000001272) #21	atp1b1a (ENSCHAG00000001285) #22	lpp (ENSCHAG00000001327)	ENSCHAG00000001411	tprg1 (ENSCHAG00000001439)	tp63 (ENSCHAG00000001532)	zgc:92591 (ENSCHAG00000002983)	EPS15 (ENSCHAG00000003036)	TTC39A (ENSCHAG00000003431)	ENSCHAG00000005784	cdkn2c (ENSCHAG00000005802)	faf1 (ENSCHAG00000005915)	dmrta2 (ENSCHAG00000008219)	elavl4 (ENSCHAG00000008272)	AGBL4 (ENSCHAG00000008915)	spata6 (ENSCHAG00000008998)	ENSCHAG00000009014
Denticle herring	MODERN SPECIES	4	elavl4 (ENSDCDG00000005159)	dmrta2 (ENSDCDG00000005360)	faf1 (ENSDCDG00000005390)	cdkn2c (ENSDCDG00000010020)	RNF11 (ENSDCDG00000010028)	TTC39A (ENSDCDG00000010326)	EPS15 (ENSDCDG00000015400)	tp63 (ENSDCDG00000016275)	tprg1 (ENSDCDG00000018026)	lpp (ENSDCDG00000018041)	bcl6aa (ENSDCDG00000018051)	si:ch73-14h10.2 (ENSDCDG00000018056)	zbtb11 (ENSDCDG00000018058)	dpt (ENSDCDG00000018069) #21	ENSDCDG00000018084	atp1b1a (ENSDCDG00000018085) #22	nme7 (ENSDCDG00000018089) #23	zgc:172121 (ENSDCDG00000018120)	BIVM (ENSDCDG00000018125)	tab3 (ENSDCDG00000018131)	tmem47 (ENSDCDG00000018138)	prrg1 (ENSDCDG00000018142)	cpox (ENSDCDG00000018148)	ENSDCDG00000018152 #25	fsd1 (ENSDCDG00000018161)	stap2b (ENSDCDG00000018188)	mpnd (ENSDCDG00000018202)	sh3gl1b (ENSDCDG00000018351)	rorca (ENSDCDG00000018359)	SEMA6B (ENSDCDG00000018402)	zgc:153115 (ENSDCDG00000019449)
Otomorpha	ANCESTRAL SPECIES	405														ENSGT00530000063970.e	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.l #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000154713.A.c.b	ENSGT00940000156234.a.b	ENSGT00940000155607.mc.b	ENSGT00940000165152	ENSGT00940000156402.A.a	ENSGT00940000154846.a.a	ENSGT00390000008042.A.b.d	ENSGT00940000156913.b.j.a	ENSGT00940000160811.d
Clupeiformes	ANCESTRAL SPECIES	806															ENSGT00940000158367.e	ENSGT01030000234579.C.l #22
Denticle herring	MODERN SPECIES	15	SLITRK1 (ENSDCDG00000024859)	slitrk6 (ENSDCDG00000024852)	SLITRK5 (ENSDCDG00000024847)	ENSDCDG00000024834	gpc5a (ENSDCDG00000024827)	gpc6a (ENSDCDG00000024818)	ggact.3 (ENSDCDG00000024812)	FARP1 (ENSDCDG00000022899)	kpnb3 (ENSDCDG00000022637)	rap2ab (ENSDCDG00000022625)	mbnl2 (ENSDCDG00000022597)	OXGR1 (ENSDCDG00000022586)	OXGR1 (ENSDCDG00000022585)	slc5a3a (ENSDCDG00000022582)	ENSDCDG00000022579	atp1b1b (ENSDCDG00000022565) #22	TMEM131 (ENSDCDG00000018598)	CNGA3 (ENSDCDG00000018363)	UBE3A (ENSDCDG00000017993)	GABRB3 (ENSDCDG00000017930)	GABRA5 (ENSDCDG00000017898)	GABRG3 (ENSDCDG00000017889)	ENSDCDG00000017881	ENSDCDG00000017879	STEAP3 (ENSDCDG00000017875)	C1QL2 (ENSDCDG00000017868)	EN1 (ENSDCDG00000017865)	entpd3 (ENSDCDG00000017852)	ENSDCDG00000017821	grhl2a (ENSDCDG00000017763)	ncalda (ENSDCDG00000017754)
Atlantic herring	MODERN SPECIES	13	KCNV2 (ENSCHAG00000025896)	pum3 (ENSCHAG00000025596)	ENSCHAG00000025545	en1b (ENSCHAG00000025540)	C1QL2 (ENSCHAG00000025537)	STEAP3 (ENSCHAG00000025532)	DBI (ENSCHAG00000025528)	ENSCHAG00000025517	ENSCHAG00000025510	ENSCHAG00000025507	GABRG3 (ENSCHAG00000025500)	GABRA5 (ENSCHAG00000025467)	GABRB3 (ENSCHAG00000025268)	ENSCHAG00000025247	ENSCHAG00000025241	ATP1B1 (ENSCHAG00000025237) #22	TMEM131 (ENSCHAG00000025225)	rap2ab (ENSCHAG00000025219)	mbnl2 (ENSCHAG00000025203)	oxgr1a.2 (ENSCHAG00000025198)	slc5a3a (ENSCHAG00000025196)	FARP1 (ENSCHAG00000024765)	GGACT (ENSCHAG00000024734)	GGACT (ENSCHAG00000024729)	ENSCHAG00000024725	ENSCHAG00000024724	gpc6a (ENSCHAG00000024676)	gpc5a (ENSCHAG00000024664)	ENSCHAG00000024657	SLITRK5 (ENSCHAG00000024654)	slitrk6 (ENSCHAG00000024646)
Otophysi	ANCESTRAL SPECIES	88	ENSGT00390000011679	ENSGT00510000047351.b	ENSGT00940000165274.a	ENSGT00940000155927	ENSGT00940000155973.b.c	ENSGT00950000183073.a.a.a	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a	ENSGT00940000153299.a.b	ENSGT00980000199406	ENSGT00530000063970.e	ENSGT01060000253390	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.l #22	ENSGT00940000158737.h	ENSGT00390000006925	ENSGT00940000157636.d	ENSGT00390000017551	ENSGT00550000074913.j	ENSGT00940000163734	ENSGT00940000156614.a	ENSGT00950000183060.a.a.d.a	ENSGT00940000163679
Characiphysae	ANCESTRAL SPECIES	206												ENSGT00980000199406	ENSGT00530000063970.e	ENSGT01060000253390	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.l #22	ENSGT00940000158737.h	ENSGT00390000006925	ENSGT00940000165152	ENSGT00390000010376	ENSGT00410000025918	ENSGT00940000154342.C	ENSGT00390000017551
Channel catfish	MODERN SPECIES	18	atp5pf (ENSIPUG00000009861)	app (ENSIPUG00000009697)	cyyr1 (ENSIPUG00000009678)	adamts1 (ENSIPUG00000009644)	adamts5 (ENSIPUG00000009603)	ENSIPUG00000009585	ENSIPUG00000009572	ENSIPUG00000009564	Ndfip2 (ENSIPUG00000009529)	n6amt1 (ENSIPUG00000009452)	spry2 (ENSIPUG00000009437)	ENSIPUG00000009405	cnpy3 (ENSIPUG00000009378)	ENSIPUG00000009359	mpc2a (ENSIPUG00000009323) #12	atnb233 (ENSIPUG00000009292) #22	ENSIPUG00000009211	knstrn (ENSIPUG00000009181)	ENSIPUG00000009051	dmd (ENSIPUG00000007857)	brat1 (ENSIPUG00000007734)	ENSIPUG00000007711	kpnb3 (ENSIPUG00000007628)	atp1a1a.1 (ENSIPUG00000007549)	ENSIPUG00000007535	ENSIPUG00000007484	ENSIPUG00000007466	ENSIPUG00000007416	ENSIPUG00000007349	ENSIPUG00000007277	ENSIPUG00000007266
Characiphysae_b	ANCESTRAL SPECIES	84	ENSGT00390000011679	ENSGT00510000047351.b	ENSGT00940000165274.a	ENSGT00940000155927	ENSGT00940000155973.b.c	ENSGT00950000183073.a.a.a	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a	ENSGT00940000153299.a.b	ENSGT00980000199406	ENSGT00530000063970.e	ENSGT01060000253390	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.l #22	ENSGT00940000158737.h	ENSGT00390000006925	ENSGT00940000165152	ENSGT00390000010376	ENSGT00410000025918	ENSGT00940000154342.C	ENSGT00390000017551
Characoidei	ANCESTRAL SPECIES	218	ENSGT00390000011679	ENSGT00510000047351.b	ENSGT00940000165274.a	ENSGT00940000155927	ENSGT00940000155973.b.c	ENSGT00950000183073.a.a.a	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a	ENSGT00940000153299.a.b	ENSGT00980000199406	ENSGT00530000063970.e	ENSGT01060000253390	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.l #22	ENSGT00940000158737.h	ENSGT00390000006925	ENSGT00390000010376	ENSGT00410000025918	ENSGT00940000154342.C
Red-bellied piranha	MODERN SPECIES	306	ENSPNAG00000025253	LRAT (ENSPNAG00000025267)	lratb.2 (ENSPNAG00000003899)	rbm46 (ENSPNAG00000025312)	npy2rl (ENSPNAG00000025345)	eif3f (ENSPNAG00000005495)	zgc:77880 (ENSPNAG00000025405)	pip4p1b (ENSPNAG00000025456)	ENSPNAG00000005375	dachb (ENSPNAG00000005028)	cnpy3 (ENSPNAG00000005860)	trpc5a (ENSPNAG00000025654)	zgc:174945 (ENSPNAG00000025677)	ENSPNAG00000025691	mpc2a (ENSPNAG00000025731) #12	atp1b1b (ENSPNAG00000025768) #22	CNGA3 (ENSPNAG00000003971)	ENSPNAG00000003978	knstrn (ENSPNAG00000025900)	ENSPNAG00000025917	ENSPNAG00000025941	DMD (ENSPNAG00000026008)
Mexicana tetra	MODERN SPECIES	3	ENSAMXG00000038448	ENSAMXG00000019430	ENSAMXG00000034469	LRAT (ENSAMXG00000002797)	lratb.2 (ENSAMXG00000034352)	npy2rl (ENSAMXG00000034879)	eif3f (ENSAMXG00000040781)	zgc:77880 (ENSAMXG00000040004)	FRMD7 (ENSAMXG00000029348)	ENSAMXG00000039390	cnpy3 (ENSAMXG00000039002)	trpc5a (ENSAMXG00000033341)	ENSAMXG00000043667	ENSAMXG00000043125	mpc2a (ENSAMXG00000005093) #12	atp1b1b (ENSAMXG00000043462) #22	CNGA3 (ENSAMXG00000004726)	ENSAMXG00000009303	knstrn (ENSAMXG00000000127)	ENSAMXG00000000123	ENSAMXG00000000117	dmd (ENSAMXG00000000112)	ENSAMXG00000039917	ENSAMXG00000040991	ENSAMXG00000040526	ENSAMXG00000033706	ENSAMXG00000037277	ENSAMXG00000012668	ENSAMXG00000012744	ENSAMXG00000042003	ENSAMXG00000037997
Electric eel	MODERN SPECIES	95	ENSEEEG00000012134	ENSEEEG00000012132	LRAT (ENSEEEG00000012130)	rbm46 (ENSEEEG00000012127)	npy2rl (ENSEEEG00000012126)	eif3f (ENSEEEG00000012037)	zgc:77880 (ENSEEEG00000012030)	pip4p1b (ENSEEEG00000012026)	FRMD7 (ENSEEEG00000012022)	dachb (ENSEEEG00000012020)	cnpy3 (ENSEEEG00000012019)	trpc5a (ENSEEEG00000012018)	ENSEEEG00000012016	ENSEEEG00000012014	ENSEEEG00000012011	atp1b1b (ENSEEEG00000012010) #22	CNGA3 (ENSEEEG00000012009)	ENSEEEG00000012008	knstrn (ENSEEEG00000012006)	brat1 (ENSEEEG00000011860)	kpnb3 (ENSEEEG00000011843)	oxgr1a.2 (ENSEEEG00000011840)	ENSEEEG00000011835	ENSEEEG00000011833
Cyprinoidei	ANCESTRAL SPECIES	179												ENSGT00980000199406	ENSGT00530000063970.e	ENSGT01060000253390	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.l #22	ENSGT00940000158737.h	ENSGT00390000006925	ENSGT00940000165457.a.a.a.b	ENSGT00940000154342.C	ENSGT00410000025918	ENSGT00390000010376	ENSGT00940000157747.z	ENSGT00940000156614.a	ENSGT00940000163734	ENSGT00550000074913.j	ENSGT00390000017551.a	ENSGT00940000157636.d
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	34	ENSGT00510000047351.b.v	ENSGT00940000165274.a.a.a	ENSGT00940000155927.x	ENSGT00940000155973.b.c.a	ENSGT00950000183073.a.a.a.ac	ENSGT00940000164842.d	ENSGT00390000003680.a.a.b.b	ENSGT00940000158972.e.b	ENSGT00390000001134.b.`b.b.k	ENSGT00390000014072.A.d.b	ENSGT01060000248594.e.a.c.a	ENSGT00980000199406.a	ENSGT00530000063970.e.d	ENSGT01060000253390	ENSGT00510000047120.gb.a #12	ENSGT01030000234579.C.l.a #22	ENSGT00940000158737.h	ENSGT00940000165457.a.a.a.b.b	ENSGT00940000154342.C.gd	ENSGT00410000025918.f	ENSGT00390000010376.b	ENSGT00940000157747.z.b	ENSGT00940000156614.a.c.a	ENSGT00390000017551.a.b	ENSGT00550000074913.j	ENSGT00940000163734.b	ENSGT00940000156614.a.c.b	ENSGT01070000253744.a.a.a.b.a.a.h.a	ENSGT00950000183060.a.a.d.a.a	ENSGT00940000163679.a	ENSGT00460000041594.r.a
Cyprininae_a	ANCESTRAL SPECIES	49	ENSGT00510000047351.b.v	ENSGT00940000165274.a.a.a	ENSGT00940000155927.x	ENSGT00940000155973.b.c.a	ENSGT00950000183073.a.a.a.ac	ENSGT00940000164842.d	ENSGT00390000003680.a.a.b.b	ENSGT00940000158972.e.b	ENSGT00390000001134.b.`b.b.k	ENSGT00390000014072.A.d.b	ENSGT01060000248594.e.a.c.a	ENSGT00980000199406.a	ENSGT00530000063970.e.d	ENSGT01060000253390	ENSGT00510000047120.gb.a #12	ENSGT01030000234579.C.l.a #22	ENSGT00940000158737.h.a	ENSGT00940000169408	ENSGT00940000165152	ENSGT00940000165457.a.a.a.b.b	ENSGT00940000154342.C.gd	ENSGT00410000025918.f	ENSGT00390000010376.b	ENSGT00940000157747.z.b	ENSGT00390000017551.a.b	ENSGT00550000074913.j.b	ENSGT00940000163734.b	ENSGT00940000156614.a.c.b	ENSGT01070000253744.a.a.a.b.a.a.h.a	ENSGT00950000183060.a.a.d.a.a	ENSGT00940000163679.a
Golden-line barbel	MODERN SPECIES	24	ENSSGRG00000010246	LRAT (ENSSGRG00000010244)	lratb.2 (ENSSGRG00000010243)	rbm46 (ENSSGRG00000010242)	npy2rl (ENSSGRG00000010240)	eif3f (ENSSGRG00000010236)	pip4p1b (ENSSGRG00000010229)	ENSSGRG00000010228	dachb (ENSSGRG00000010223)	cnpy3 (ENSSGRG00000010220)	trpc5a (ENSSGRG00000010218)	zgc:174945 (ENSSGRG00000010217)	ENSSGRG00000010216	ENSSGRG00000010215	mpc2a (ENSSGRG00000010214) #12	atp1b1b (ENSSGRG00000010213) #22	CNGA3 (ENSSGRG00000010212)	ENSSGRG00000010211	ENSSGRG00000010209	DMD (ENSSGRG00000006108)	ENSSGRG00000005979	knstrn (ENSSGRG00000005975)	ENSSGRG00000002786	brat1 (ENSSGRG00000002732)	EIF3B (ENSSGRG00000002725)	ENSSGRG00000002721	ENSSGRG00000002714	ENSSGRG00000002708	ttyh3b (ENSSGRG00000002354)	iqce (ENSSGRG00000002343)	grk4 (ENSSGRG00000000570)
Common carp reference	MODERN SPECIES	27	LRAT (ENSCCRG00000028275)	rbm46 (ENSCCRG00000028269)	npy2rl (ENSCCRG00000054167)	eif3f (ENSCCRG00000000981)	zgc:77880 (ENSCCRG00000029331)	pip4p1b (ENSCCRG00000050043)	ENSCCRG00000055664	ENSCCRG00000080167	dachb (ENSCCRG00000063889)	cnpy3 (ENSCCRG00000071051)	trpc5a (ENSCCRG00000050050)	zgc:174945 (ENSCCRG00000075299)	ENSCCRG00000042759	ENSCCRG00000042764	mpc2a (ENSCCRG00000069732) #12	atp1b1b (ENSCCRG00000042777) #22	ENSCCRG00000071357	ENSCCRG00000042713	crfb15 (ENSCCRG00000042827)	ENSCCRG00000012377	ENSCCRG00000074693	knstrn (ENSCCRG00000080497)	ENSCCRG00000028649	ENSCCRG00000064492	ENSCCRG00000053729	ENSCCRG00000015062	ENSCCRG00000064745	brat1 (ENSCCRG00000050076)	ENSCCRG00000050075	ENSCCRG00000031788	ttyh3b (ENSCCRG00000031782)
Goldfish	MODERN SPECIES	18	fga (ENSCARG00000015010)	LRAT (ENSCARG00000015004)	lratb.2 (ENSCARG00000014997)	rbm46 (ENSCARG00000014988)	npy2rl (ENSCARG00000014977)	eif3f (ENSCARG00000014860)	pip4p1b (ENSCARG00000014825)	ENSCARG00000014819	dachb (ENSCARG00000014783)	cnpy3 (ENSCARG00000014754)	trpc5a (ENSCARG00000014734)	zgc:174945 (ENSCARG00000014724)	ENSCARG00000014715	ENSCARG00000014700	mpc2a (ENSCARG00000014671) #12	atp1b1b (ENSCARG00000014662) #22	CNGA3 (ENSCARG00000014622)	ENSCARG00000014611	crfb15 (ENSCARG00000014606)	ENSCARG00000014604	ENSCARG00000014071	arl6 (ENSCARG00000014003)	SLC5A7 (ENSCARG00000013990)	kctd12.2 (ENSCARG00000023274)	lmo7b (ENSCARG00000023205)	ENSCARG00000023268	klf12a (ENSCARG00000023176)	pibf1 (ENSCARG00000023114)	ENSCARG00000023089	gtf2f2a (ENSCARG00000023034)	tpt1 (ENSCARG00000023006)
Cyprininae	ANCESTRAL SPECIES	367	ENSGT00390000011679.a	ENSGT00510000047351.b.u	ENSGT00940000165274.a.b	ENSGT00940000155927.w	ENSGT00940000155973.b.c.b	ENSGT00950000183073.a.a.a.`c	ENSGT00940000164842.c	ENSGT00390000003680.a.a.b.a	ENSGT00940000158972.e.a	ENSGT00390000001134.b.`b.b.l	ENSGT00390000014072.A.c	ENSGT01060000248594.e.a.c.b	ENSGT00980000199406.b	ENSGT00530000063970.e.c	ENSGT00510000047120.gb.b #12	ENSGT01030000234579.C.l.b #22	ENSGT00940000165457.a.a.a.b.a	ENSGT00940000154342.C.hd	ENSGT00410000025918.e	ENSGT00390000010376.a	ENSGT00940000157747.z.a
Goldfish	MODERN SPECIES		ENSCARG00000001577	rnf175 (ENSCARG00000001587)	ENSCARG00000001602	LRAT (ENSCARG00000001614)	ENSCARG00000001619	npy2rl (ENSCARG00000001623)	eif3f (ENSCARG00000001629)	zgc:77880 (ENSCARG00000001643)	pip4p1b (ENSCARG00000001650)	ENSCARG00000001656	dachb (ENSCARG00000001662)	cnpy3 (ENSCARG00000001669)	trpc5a (ENSCARG00000001675)	ENSCARG00000001684	mpc2a (ENSCARG00000001696) #12	atp1b1b (ENSCARG00000001706) #22	crfb15 (ENSCARG00000001713)	DMD (ENSCARG00000002006)	ENSCARG00000006312	knstrn (ENSCARG00000006334)	SDK1 (ENSCARG00000006501)	ENSCARG00000008048	ENSCARG00000008050	dnaja1 (ENSCARG00000008062)	ENSCARG00000008141	rps6 (ENSCARG00000008188)	ENSCARG00000008246	ENSCARG00000008252	ENSCARG00000008259	ENSCARG00000008269	ddx39aa (ENSCARG00000008295)
Cyprininae_a	ANCESTRAL SPECIES	82	ENSGT00390000011679.a	ENSGT00510000047351.b.u	ENSGT00940000165274.a.b	ENSGT00940000155927.w	ENSGT00940000155973.b.c.b	ENSGT00950000183073.a.a.a.`c	ENSGT00940000164842.c	ENSGT00390000003680.a.a.b.a	ENSGT00940000158972.e.a	ENSGT00390000001134.b.`b.b.l	ENSGT00390000014072.A.c	ENSGT01060000248594.e.a.c.b	ENSGT00980000199406.b	ENSGT00530000063970.e.c	ENSGT00510000047120.gb.b #12	ENSGT01030000234579.C.l.b #22	ENSGT00940000158737.h.b	ENSGT00940000165457.a.a.a.b.a	ENSGT00940000154342.C.hd	ENSGT00410000025918.e	ENSGT00390000010376.a	ENSGT00940000157747.z.a	ENSGT00940000157636.d	ENSGT00390000017551.a.a	ENSGT00550000074913.j.a	ENSGT00940000163734.a	ENSGT00940000156614.a.d	ENSGT01070000253744.a.a.a.b.a.a.h.b	ENSGT00950000183060.a.a.d.a.b	ENSGT00940000163679.b	ENSGT00460000041594.r.b
Common carp reference	MODERN SPECIES	22	rnf175 (ENSCCRG00000043824)	ENSCCRG00000029761	LRAT (ENSCCRG00000029770)	lratb.2 (ENSCCRG00000029773)	rbm46 (ENSCCRG00000048524)	npy2rl (ENSCCRG00000049983)	zgc:77880 (ENSCCRG00000015791)	pip4p1b (ENSCCRG00000060292)	ENSCCRG00000074308	dachb (ENSCCRG00000000642)	cnpy3 (ENSCCRG00000072546)	trpc5a (ENSCCRG00000015876)	ENSCCRG00000039487	ENSCCRG00000023360	mpc2a (ENSCCRG00000042768) #12	atp1b1b (ENSCCRG00000042653) #22	ENSCCRG00000070207	crfb15 (ENSCCRG00000042750)	ENSCCRG00000015102	knstrn (ENSCCRG00000051618)	ENSCCRG00000068867	ENSCCRG00000081826	ENSCCRG00000052980	ENSCCRG00000067442	brat1 (ENSCCRG00000029322)	ENSCCRG00000025244	ENSCCRG00000026723	ENSCCRG00000067811	ENSCCRG00000063462	ttyh3b (ENSCCRG00000020363)	iqce (ENSCCRG00000020381)
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	85															mpc2a (ENSSGRG00000019838) #12	atp1b1b (ENSSGRG00000019839) #22	ENSSGRG00000019840 #22	crfb15 (ENSSGRG00000019843)	DMD (ENSSGRG00000019951)	ENSSGRG00000023092	ENSSGRG00000023093	knstrn (ENSSGRG00000023094)	SDK1 (ENSSGRG00000023106)	ENSSGRG00000023113	ENSSGRG00000023114	ENSSGRG00000023115	ENSSGRG00000023116	ENSSGRG00000023117	ENSSGRG00000023119	ENSSGRG00000023120	ENSSGRG00000023121
Golden-line barbel	MODERN SPECIES	85														mpc2a (ENSSGRG00000019838) #12	atp1b1b (ENSSGRG00000019839) #22	ENSSGRG00000019840 #22	crfb15 (ENSSGRG00000019843)	DMD (ENSSGRG00000019951)	ENSSGRG00000023092	ENSSGRG00000023093	knstrn (ENSSGRG00000023094)	SDK1 (ENSSGRG00000023106)	ENSSGRG00000023113	ENSSGRG00000023114	ENSSGRG00000023115	ENSSGRG00000023116	ENSSGRG00000023117	ENSSGRG00000023119	ENSSGRG00000023120	ENSSGRG00000023121	ENSSGRG00000023122
Zebrafish	MODERN SPECIES		LRAT (ENSDARG00000096594)	lratb.2 (ENSDARG00000077652)	rbm46 (ENSDARG00000079452)	npy2rl (ENSDARG00000089943)	eif3f (ENSDARG00000077533)	zgc:77880 (ENSDARG00000030563)	pip4p1b (ENSDARG00000026387)	FRMD7 (ENSDARG00000070495)	dachb (ENSDARG00000034785)	cnpy3 (ENSDARG00000070512)	trpc5a (ENSDARG00000070504)	zgc:174945 (ENSDARG00000062057)	ENSDARG00000067992	ENSDARG00000070502	mpc2a (ENSDARG00000037679) #12	atp1b1b (ENSDARG00000076833) #22	CNGA3 (ENSDARG00000012297)	ENSDARG00000087107	crfb15 (ENSDARG00000099342)	dmd (ENSDARG00000008487)	ENSDARG00000070239	knstrn (ENSDARG00000074379)	SDK1 (ENSDARG00000062854)	ENSDARG00000092242	ENSDARG00000092200	ENSDARG00000093636	ENSDARG00000095482	ENSDARG00000094981	GNA12 (ENSDARG00000037619)	brat1 (ENSDARG00000062585)	EIF3B (ENSDARG00000074213)
Euteleosteomorpha	ANCESTRAL SPECIES	23	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.s.b	ENSGT00950000186445	ENSGT00390000010760.f #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Acanthomorphata	DUPLICATION
Acanthomorphata	ANCESTRAL SPECIES	21	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Pinecone sodierfish	MODERN SPECIES	18	SLCO2A1 (ENSMMDG00005021271)	rab6ba (ENSMMDG00005021265)	cep63 (ENSMMDG00005021262)	amotl2a (ENSMMDG00005021261)	sap130a (ENSMMDG00005020204)	ENSMMDG00005020165	GPR17 (ENSMMDG00005020152)	INPP5D (ENSMMDG00005020146)	smx5 (ENSMMDG00005020144)	bcl6aa (ENSMMDG00005020141)	lpp (ENSMMDG00005020138)	tprg1 (ENSMMDG00005020137)	tp63 (ENSMMDG00005019683)	zbtb11 (ENSMMDG00005019671)	dpt (ENSMMDG00005019669) #21	atp1b1b (ENSMMDG00005019666) #22	nme7 (ENSMMDG00005019532) #23	zgc:172121 (ENSMMDG00005019501)	BIVM (ENSMMDG00005019496)	si:ch211-201h21.5 (ENSMMDG00005019494)	TMEM131 (ENSMMDG00005018054)	CNGA3 (ENSMMDG00005018026)	ube3a (ENSMMDG00005018018)	ATP10A (ENSMMDG00005017988)	GABRB3 (ENSMMDG00005017960)	GABRA5 (ENSMMDG00005017261)	GABRG3 (ENSMMDG00005017233)	OCA2 (ENSMMDG00005017219)	HERC2 (ENSMMDG00005012258)	nipa1 (ENSMMDG00005012145)	nipa2 (ENSMMDG00005012143)
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	469	zgc:103559 (ENSHCOG00000014297)	agxta (ENSHCOG00000014275)	ENSHCOG00000014202	amotl2a (ENSHCOG00000014193)	sap130a (ENSHCOG00000014176)	ENSHCOG00000014164	GPR17 (ENSHCOG00000014075)	INPP5D (ENSHCOG00000014071)	smx5 (ENSHCOG00000014057)	bcl6aa (ENSHCOG00000014038)	lpp (ENSHCOG00000014025)	tprg1 (ENSHCOG00000013940)	tp63 (ENSHCOG00000013928)	ENSHCOG00000013898	dpt (ENSHCOG00000013880) #21	ATP1B1 (ENSHCOG00000013859) #22	ENSHCOG00000013842 #22	nme7 (ENSHCOG00000013834) #23	zgc:172121 (ENSHCOG00000013784)	BIVM (ENSHCOG00000013774)	si:ch211-201h21.5 (ENSHCOG00000013752)	TMEM131 (ENSHCOG00000013631)	CNGA3 (ENSHCOG00000013535)	ENSHCOG00000013507	ENSHCOG00000013479	ENSHCOG00000013433	ENSHCOG00000013382	ENSHCOG00000000384	ENSHCOG00000013361	ENSHCOG00000013353	erich3 (ENSHCOG00000013330)
Tiger tail seahorse	MODERN SPECIES	469	agxta (ENSHCOG00000014275)	ENSHCOG00000014202	amotl2a (ENSHCOG00000014193)	sap130a (ENSHCOG00000014176)	ENSHCOG00000014164	GPR17 (ENSHCOG00000014075)	INPP5D (ENSHCOG00000014071)	smx5 (ENSHCOG00000014057)	bcl6aa (ENSHCOG00000014038)	lpp (ENSHCOG00000014025)	tprg1 (ENSHCOG00000013940)	tp63 (ENSHCOG00000013928)	ENSHCOG00000013898	dpt (ENSHCOG00000013880) #21	ATP1B1 (ENSHCOG00000013859) #22	ENSHCOG00000013842 #22	nme7 (ENSHCOG00000013834) #23	zgc:172121 (ENSHCOG00000013784)	BIVM (ENSHCOG00000013774)	si:ch211-201h21.5 (ENSHCOG00000013752)	TMEM131 (ENSHCOG00000013631)	CNGA3 (ENSHCOG00000013535)	ENSHCOG00000013507	ENSHCOG00000013479	ENSHCOG00000013433	ENSHCOG00000013382	ENSHCOG00000000384	ENSHCOG00000013361	ENSHCOG00000013353	erich3 (ENSHCOG00000013330)	tnni3k (ENSHCOG00000013312)
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00730000112922	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00730000112922	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Cichlidae	ANCESTRAL SPECIES	36	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Burton s mouthbrooder	MODERN SPECIES	301	rab6ba (ENSHBUG00000012905)	im:7152348 (ENSHBUG00000012915)	cep63 (ENSHBUG00000012924)	amotl2a (ENSHBUG00000000895)	sap130a (ENSHBUG00000013006)	ENSHBUG00000013368	GPR17 (ENSHBUG00000013384)	INPP5D (ENSHBUG00000013397)	smx5 (ENSHBUG00000000394)	bcl6aa (ENSHBUG00000013427)	lpp (ENSHBUG00000013448)	tprg1 (ENSHBUG00000013459)	tp63 (ENSHBUG00000013508)	zbtb11 (ENSHBUG00000013524)	dpt (ENSHBUG00000000779) #21	ATP1B1 (ENSHBUG00000013688) #22	nme7 (ENSHBUG00000013730) #23	zgc:172121 (ENSHBUG00000001071)	BIVM (ENSHBUG00000013770)	si:ch211-201h21.5 (ENSHBUG00000013789)	TMEM131 (ENSHBUG00000014737)	CNGA3 (ENSHBUG00000014779)	ube3a (ENSHBUG00000014796)	ATP10A (ENSHBUG00000014907)	GABRB3 (ENSHBUG00000014943)	GABRA5 (ENSHBUG00000015029)	GABRG3 (ENSHBUG00000015077)	OCA2 (ENSHBUG00000015094)	HERC2 (ENSHBUG00000015333)	nipa1 (ENSHBUG00000015413)	nipa2 (ENSHBUG00000015440)
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Eastern happy	MODERN SPECIES	14	cep63 (ENSACLG00000025092)	amotl2a (ENSACLG00000025064)	sap130a (ENSACLG00000024963)	ENSACLG00000024879	GPR17 (ENSACLG00000024872)	INPP5D (ENSACLG00000024736)	smx5 (ENSACLG00000024717)	bcl6aa (ENSACLG00000024631)	lpp (ENSACLG00000024600)	tprg1 (ENSACLG00000024576)	ENSACLG00000024560	ENSACLG00000024556	tp63 (ENSACLG00000024498)	zbtb11 (ENSACLG00000024481)	dpt (ENSACLG00000024467) #21	atp1b1b (ENSACLG00000024438) #22	nme7 (ENSACLG00000024393) #23	zgc:172121 (ENSACLG00000024325)	BIVM (ENSACLG00000024318)	si:ch211-201h21.5 (ENSACLG00000024313)	TMEM131 (ENSACLG00000024288)	CNGA3 (ENSACLG00000024274)	ube3a (ENSACLG00000024258)	ATP10A (ENSACLG00000024242)	ENSACLG00000024240	GABRB3 (ENSACLG00000024236)	GABRA5 (ENSACLG00000024232)	GABRG3 (ENSACLG00000024228)	OCA2 (ENSACLG00000024190)	HERC2 (ENSACLG00000024080)	nipa1 (ENSACLG00000024035)
Zebra mbuna	MODERN SPECIES	1105	amotl2a (ENSMZEG00005008956)	sap130a (ENSMZEG00005008912)	ENSMZEG00005008773	GPR17 (ENSMZEG00005008737)	INPP5D (ENSMZEG00005008710)	smx5 (ENSMZEG00005008688)	bcl6aa (ENSMZEG00005008634)	lpp (ENSMZEG00005008596)	tprg1 (ENSMZEG00005008561)	tp63 (ENSMZEG00005008535)	tp63 (ENSMZEG00005008516)	ENSMZEG00005008500	ENSMZEG00005008492	ENSMZEG00005008484	dpt (ENSMZEG00005008462) #21	ATP1B1 (ENSMZEG00005008447) #22	nme7 (ENSMZEG00005008419) #23	zgc:172121 (ENSMZEG00005008403)	BIVM (ENSMZEG00005008383)	si:ch211-201h21.5 (ENSMZEG00005008334)	TMEM131 (ENSMZEG00005008057)	CNGA3 (ENSMZEG00005008008)	ube3a (ENSMZEG00005007977)	ATP10A (ENSMZEG00005007941)	GABRB3 (ENSMZEG00005007922)	GABRA5 (ENSMZEG00005007892)	GABRG3 (ENSMZEG00005007851)	OCA2 (ENSMZEG00005007757)	HERC2 (ENSMZEG00005007614)	ENSMZEG00005007589	nipa1 (ENSMZEG00005007547)
P. nyererei	MODERN SPECIES	318	im:7152348 (ENSPNYG00000019948)	cep63 (ENSPNYG00000019933)	amotl2a (ENSPNYG00000019921)	sap130a (ENSPNYG00000019866)	ENSPNYG00000019646	GPR17 (ENSPNYG00000019617)	INPP5D (ENSPNYG00000019357)	smx5 (ENSPNYG00000019298)	bcl6aa (ENSPNYG00000019267)	lpp (ENSPNYG00000019245)	tprg1 (ENSPNYG00000019230)	tp63 (ENSPNYG00000019171)	ENSPNYG00000019146	ENSPNYG00000019136	dpt (ENSPNYG00000019116) #21	ATP1B1 (ENSPNYG00000019105) #22	nme7 (ENSPNYG00000018965) #23	zgc:172121 (ENSPNYG00000018926)	BIVM (ENSPNYG00000018896)	si:ch211-201h21.5 (ENSPNYG00000018878)	TMEM131 (ENSPNYG00000018471)	CNGA3 (ENSPNYG00000018402)	ube3a (ENSPNYG00000018338)	ATP10A (ENSPNYG00000018279)	GABRB3 (ENSPNYG00000018243)	GABRA5 (ENSPNYG00000018217)	GABRG3 (ENSPNYG00000018192)	OCA2 (ENSPNYG00000017981)	HERC2 (ENSPNYG00000017776)	ENSPNYG00000017744	nipa1 (ENSPNYG00000017735)
Lyretail cichlid	MODERN SPECIES	307	im:7152348 (ENSNBRG00000013666)	ENSNBRG00000013655	amotl2a (ENSNBRG00000013643)	sap130a (ENSNBRG00000013596)	ENSNBRG00000013153	GPR17 (ENSNBRG00000013055)	INPP5D (ENSNBRG00000012987)	smx5 (ENSNBRG00000012904)	bcl6aa (ENSNBRG00000012880)	lpp (ENSNBRG00000012846)	tprg1 (ENSNBRG00000012761)	tp63 (ENSNBRG00000012703)	ENSNBRG00000012678	ENSNBRG00000012666	dpt (ENSNBRG00000012642) #21	ATP1B1 (ENSNBRG00000012617) #22	nme7 (ENSNBRG00000012586) #23	zgc:172121 (ENSNBRG00000012573)	ENSNBRG00000012521	si:ch211-201h21.5 (ENSNBRG00000012500)	TMEM131 (ENSNBRG00000012482)	CNGA3 (ENSNBRG00000012465)	ube3a (ENSNBRG00000012434)	ATP10A (ENSNBRG00000012378)	ENSNBRG00000012355	GABRA5 (ENSNBRG00000012332)	GABRG3 (ENSNBRG00000012277)	OCA2 (ENSNBRG00000012100)	HERC2 (ENSNBRG00000011878)	ENSNBRG00000011839	nipa1 (ENSNBRG00000011798)
Nile tilapia	MODERN SPECIES	14	im:7152348 (ENSONIG00000041034)	cep63 (ENSONIG00000019310)	ENSONIG00000040735	amotl2a (ENSONIG00000019311)	sap130a (ENSONIG00000019312)	ENSONIG00000019314	GPR17 (ENSONIG00000021192)	INPP5D (ENSONIG00000019319)	smx5 (ENSONIG00000019321)	bcl6aa (ENSONIG00000019322)	lpp (ENSONIG00000019323)	tprg1 (ENSONIG00000019324)	tp63 (ENSONIG00000019325)	zbtb11 (ENSONIG00000019328)	nme7 (ENSONIG00000019333) #23	ATP1B1 (ENSONIG00000019331) #22	zgc:172121 (ENSONIG00000019336)	BIVM (ENSONIG00000019337)	si:ch211-201h21.5 (ENSONIG00000019338)	TMEM131 (ENSONIG00000019341)	CNGA3 (ENSONIG00000019344)	ube3a (ENSONIG00000019346)	ATP10A (ENSONIG00000019347)	GABRB3 (ENSONIG00000019350)	GABRA5 (ENSONIG00000019352)	GABRG3 (ENSONIG00000004903)	OCA2 (ENSONIG00000004896)	HERC2 (ENSONIG00000004888)	nipa1 (ENSONIG00000004886)	nipa2 (ENSONIG00000004884)	cyfip1 (ENSONIG00000004878)
Midas cichlid	MODERN SPECIES	366	cep63 (ENSACIG00000007198)	amotl2a (ENSACIG00000007230)	sap130a (ENSACIG00000007254)	MYO7B (ENSACIG00000007542)	ENSACIG00000007661	GPR17 (ENSACIG00000007711)	INPP5D (ENSACIG00000007727)	smx5 (ENSACIG00000007795)	bcl6aa (ENSACIG00000007844)	lpp (ENSACIG00000007870)	tprg1 (ENSACIG00000007899)	tp63 (ENSACIG00000007960)	ENSACIG00000007985	ENSACIG00000007995	dpt (ENSACIG00000008054) #21	ATP1B1 (ENSACIG00000008087) #22	nme7 (ENSACIG00000008104) #23	zgc:172121 (ENSACIG00000008134)	BIVM (ENSACIG00000008161)	si:ch211-201h21.5 (ENSACIG00000008189)	TMEM131 (ENSACIG00000008241)
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT00730000112922	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00730000112922	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Amphiprion	ANCESTRAL SPECIES	2	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Orange clownfish	MODERN SPECIES	11	rab6ba (ENSAPEG00000020892)	im:7152348 (ENSAPEG00000020873)	cep63 (ENSAPEG00000020847)	amotl2a (ENSAPEG00000020830)	sap130a (ENSAPEG00000020745)	ENSAPEG00000020604	GPR17 (ENSAPEG00000020587)	INPP5D (ENSAPEG00000020416)	smx5 (ENSAPEG00000020375)	bcl6aa (ENSAPEG00000020369)	lpp (ENSAPEG00000020353)	tprg1 (ENSAPEG00000020253)	tp63 (ENSAPEG00000020207)	ENSAPEG00000020191	dpt (ENSAPEG00000020176) #21	ATP1B1 (ENSAPEG00000020152) #22	nme7 (ENSAPEG00000020138) #23	zgc:172121 (ENSAPEG00000020113)	BIVM (ENSAPEG00000020084)	si:ch211-201h21.5 (ENSAPEG00000020059)	TMEM131 (ENSAPEG00000019535)	CNGA3 (ENSAPEG00000019486)	ube3a (ENSAPEG00000019470)	ATP10A (ENSAPEG00000019418)	GABRB3 (ENSAPEG00000019394)	GABRA5 (ENSAPEG00000019071)	GABRG3 (ENSAPEG00000019002)	OCA2 (ENSAPEG00000018748)	HERC2 (ENSAPEG00000018488)	nipa1 (ENSAPEG00000018468)	nipa2 (ENSAPEG00000018436)
Clown anemonefish	MODERN SPECIES	2229												tp63 (ENSAOCG00000023955)	ENSAOCG00000023960	ENSAOCG00000023965	dpt (ENSAOCG00000023974) #21	ATP1B1 (ENSAOCG00000023987) #22	nme7 (ENSAOCG00000024004) #23	zgc:172121 (ENSAOCG00000024018)	BIVM (ENSAOCG00000024029)	si:ch211-201h21.5 (ENSAOCG00000024058)
Spiny chromis	MODERN SPECIES	1299														zbtb11 (ENSAPOG00000004750)	dpt (ENSAPOG00000004737) #21	ATP1B1 (ENSAPOG00000004720) #22	nme7 (ENSAPOG00000004689) #23	zgc:172121 (ENSAPOG00000004656)	BIVM (ENSAPOG00000004648)	si:ch211-201h21.5 (ENSAPOG00000004625)	TMEM131 (ENSAPOG00000004606)
Bicolor damselfish	MODERN SPECIES	1107												ENSSPAG00000012586	tp63 (ENSSPAG00000012597)	ENSSPAG00000012670	dpt (ENSSPAG00000012688) #21	ATP1B1 (ENSSPAG00000012706) #22	nme7 (ENSSPAG00000012718) #23	zgc:172121 (ENSSPAG00000012760)	BIVM (ENSSPAG00000012774)	si:ch211-201h21.5 (ENSSPAG00000012802)	TMEM131 (ENSSPAG00000012836)	CNGA3 (ENSSPAG00000013056)	ube3a (ENSSPAG00000013079)
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Oryzias	ANCESTRAL SPECIES	5	ENSGT00390000013841	ENSGT00950000183110.b.a.c	ENSGT00940000160036	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Oryzias_b	ANCESTRAL SPECIES	26	ENSGT00390000013841	ENSGT00950000183110.b.a.c	ENSGT00940000160036	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651	ENSGT00940000165545
Javanese ricefish	MODERN SPECIES	18	PIP5K1C (ENSOJAG00000011858)	ENSOJAG00000012200	POLR2E (ENSOJAG00000012258)	ARHGAP45 (ENSOJAG00000012312)	tjp3 (ENSOJAG00000000075)	amotl2a (ENSOJAG00000000111)	sap130a (ENSOJAG00000000219)	GPR17 (ENSOJAG00000000598)	INPP5D (ENSOJAG00000000617)	smx5 (ENSOJAG00000000656)	bcl6aa (ENSOJAG00000000663)	lpp (ENSOJAG00000000677)	tprg1 (ENSOJAG00000000690)	tp63 (ENSOJAG00000000722)	dpt (ENSOJAG00000000754) #21	ATP1B1 (ENSOJAG00000000760) #22	nme7 (ENSOJAG00000000826) #23	zgc:172121 (ENSOJAG00000000916)	BIVM (ENSOJAG00000000926)	CNGA3 (ENSOJAG00000001045)	ube3a (ENSOJAG00000001085)	ATP10A (ENSOJAG00000001180)	GABRB3 (ENSOJAG00000001281)	GABRA5 (ENSOJAG00000001471)	GABRG3 (ENSOJAG00000001502)	OCA2 (ENSOJAG00000001674)	nipa1 (ENSOJAG00000004419)	nipa2 (ENSOJAG00000004455)	cyfip1 (ENSOJAG00000004536)	ENSOJAG00000004684	CHST7 (ENSOJAG00000004782)
Indian medaka	MODERN SPECIES	13	ARHGAP45 (ENSOMEG00000002732)	tjp3 (ENSOMEG00000000054)	ENSOMEG00000002768	amotl2a (ENSOMEG00000002779)	sap130a (ENSOMEG00000002807)	ENSOMEG00000002849	GPR17 (ENSOMEG00000000061)	INPP5D (ENSOMEG00000002876)	smx5 (ENSOMEG00000002892)	bcl6aa (ENSOMEG00000002918)	lpp (ENSOMEG00000002950)	tprg1 (ENSOMEG00000002969)	tp63 (ENSOMEG00000002996)	zbtb11 (ENSOMEG00000003031)	dpt (ENSOMEG00000003058) #21	ATP1B1 (ENSOMEG00000003241) #22	nme7 (ENSOMEG00000003291) #23	zgc:172121 (ENSOMEG00000003324)	BIVM (ENSOMEG00000003358)	TMEM131 (ENSOMEG00000003442)	CNGA3 (ENSOMEG00000003494)	ube3a (ENSOMEG00000003524)	ATP10A (ENSOMEG00000003604)	GABRB3 (ENSOMEG00000000649)	GABRA5 (ENSOMEG00000003697)	GABRG3 (ENSOMEG00000003739)	OCA2 (ENSOMEG00000003871)	HERC2 (ENSOMEG00000003969)	nipa1 (ENSOMEG00000004017)	nipa2 (ENSOMEG00000004059)	ENSOMEG00000004072
Oryzias_a	ANCESTRAL SPECIES	24	ENSGT00390000013841	ENSGT00950000183110.b.a.c	ENSGT00940000160036	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895.y	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Chinese medaka	MODERN SPECIES	95	ENSOSIG00000018188	ENSOSIG00000018181	marchf2 (ENSOSIG00000018172)	rab11ba (ENSOSIG00000018167)	ARHGAP45 (ENSOSIG00000017940)	tjp3 (ENSOSIG00000017907)	amotl2a (ENSOSIG00000017883)	sap130a (ENSOSIG00000017881)	GPR17 (ENSOSIG00000017791)	ENSOSIG00000017072	lpp (ENSOSIG00000017031)	tprg1 (ENSOSIG00000017027)	tp63 (ENSOSIG00000016987)	zbtb11 (ENSOSIG00000016977)	dpt (ENSOSIG00000016976) #21	ATP1B1 (ENSOSIG00000016974) #22	ENSOSIG00000016971	nme7 (ENSOSIG00000016346) #23	zgc:172121 (ENSOSIG00000016323)	BIVM (ENSOSIG00000016317)	TMEM131 (ENSOSIG00000015969)	CNGA3 (ENSOSIG00000015947)	ube3a (ENSOSIG00000014433)	ATP10A (ENSOSIG00000014383)	GABRB3 (ENSOSIG00000014219)	ENSOSIG00000014215	GABRA5 (ENSOSIG00000014213)	GABRG3 (ENSOSIG00000013730)	OCA2 (ENSOSIG00000011692)	nipa1 (ENSOSIG00000011470)	nipa2 (ENSOSIG00000011465)
Japanese Medaka HdrR	MODERN SPECIES	18	POLR2E (ENSORLG00000015346)	ARHGAP45 (ENSORLG00000015393)	tjp3 (ENSORLG00000015436)	amotl2a (ENSORLG00000015457)	sap130a (ENSORLG00000015499)	ENSORLG00000015554	GPR17 (ENSORLG00000015572)	INPP5D (ENSORLG00000015584)	smx5 (ENSORLG00000029858)	bcl6aa (ENSORLG00000015589)	lpp (ENSORLG00000015602)	tprg1 (ENSORLG00000015610)	tp63 (ENSORLG00000015665)	zbtb11 (ENSORLG00000015676)	dpt (ENSORLG00000028799) #21	ENSORLG00000028494 #22	nme7 (ENSORLG00000015702) #23	zgc:172121 (ENSORLG00000015709)	BIVM (ENSORLG00000015711)	TMEM131 (ENSORLG00000015740)	CNGA3 (ENSORLG00000015748)	ube3a (ENSORLG00000015759)	ATP10A (ENSORLG00000015800)	GABRB3 (ENSORLG00000015836)	GABRA5 (ENSORLG00000015867)	GABRG3 (ENSORLG00000029938)	oca2 (ENSORLG00000015893)	HERC2 (ENSORLG00000015913)	nipa1 (ENSORLG00000015919)	nipa2 (ENSORLG00000015929)	cyfip1 (ENSORLG00000015984)
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00940000179813	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Aplocheiloidei	ANCESTRAL SPECIES	77				ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00940000179813	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Mangrove rivulus	MODERN SPECIES	71	ENSKMAG00000014444	cep63 (ENSKMAG00000014462)	im:7152348 (ENSKMAG00000014482)	amotl2a (ENSKMAG00000014518)	sap130a (ENSKMAG00000014621)	ENSKMAG00000014712	GPR17 (ENSKMAG00000014839)	INPP5D (ENSKMAG00000014854)	smx5 (ENSKMAG00000014909)	bcl6aa (ENSKMAG00000014942)	lpp (ENSKMAG00000015006)	tprg1 (ENSKMAG00000015046)	tp63 (ENSKMAG00000015083)	ENSKMAG00000015169	dpt (ENSKMAG00000015183) #21	ATP1B1 (ENSKMAG00000015208) #22	nme7 (ENSKMAG00000015255) #23	zgc:172121 (ENSKMAG00000015312)	BIVM (ENSKMAG00000015343)	si:ch211-201h21.5 (ENSKMAG00000015377)	ENSKMAG00000015395	TMEM131 (ENSKMAG00000015433)	CNGA3 (ENSKMAG00000015496)	ube3a (ENSKMAG00000015531)	ATP10A (ENSKMAG00000015579)	GABRB3 (ENSKMAG00000015618)	GABRA5 (ENSKMAG00000015685)	GABRG3 (ENSKMAG00000015710)	OCA2 (ENSKMAG00000015767)	HERC2 (ENSKMAG00000015883)	ENSKMAG00000016023
Turquoise killifish	MODERN SPECIES	1621	HDLBP (ENSNFUG00015007570)	FARP2 (ENSNFUG00015007528)	ENSNFUG00015007524	ESPNL (ENSNFUG00015007487)	KLHL30 (ENSNFUG00015007474)	ENSNFUG00015007470	SNED1 (ENSNFUG00015007468)	AMOTL2A (ENSNFUG00015007463)	SAP130A (ENSNFUG00015005705)	GPR17 (ENSNFUG00015005161)	INPP5D (ENSNFUG00015005120)	smx5 (ENSNFUG00015005084)	BCL6A (ENSNFUG00015005020)	lpp (ENSNFUG00015004992)	dpt (ENSNFUG00015004973) #21	ATP1B1 (ENSNFUG00015004960) #22	NME7 (ENSNFUG00015004791) #23	Nfu_g_1_000833 (ENSNFUG00015004725)	BIVM (ENSNFUG00015004716)	Nfu_g_1_000908 (ENSNFUG00015004707)	ENSNFUG00015017025
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00940000179813	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
NAME_4	ANCESTRAL SPECIES	11	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00940000179813	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Sheepshead minnow	MODERN SPECIES	796															dpt (ENSCVAG00000002002) #21	ATP1B1 (ENSCVAG00000002015) #22	nme7 (ENSCVAG00000002023) #23	zgc:172121 (ENSCVAG00000002025)	BIVM (ENSCVAG00000002031)	si:ch211-201h21.5 (ENSCVAG00000002036)	ENSCVAG00000002040	TMEM131 (ENSCVAG00000002057)	CNGA3 (ENSCVAG00000002062)	ube3a (ENSCVAG00000002071)	ATP10A (ENSCVAG00000002090)	ndnf (ENSCVAG00000002096)
Mummichog	MODERN SPECIES	2185	rab6ba (ENSFHEG00000008789)	im:7152348 (ENSFHEG00000008809)	cep63 (ENSFHEG00000008888)	amotl2a (ENSFHEG00000008908)	sap130a (ENSFHEG00000009019)	MYO7B (ENSFHEG00000009457)	GPR17 (ENSFHEG00000009475)	INPP5D (ENSFHEG00000009590)	smx5 (ENSFHEG00000009619)	bcl6aa (ENSFHEG00000009639)	lpp (ENSFHEG00000009724)	tprg1 (ENSFHEG00000009756)	tp63 (ENSFHEG00000009856)	ENSFHEG00000009909	dpt (ENSFHEG00000009930) #21	ATP1B1 (ENSFHEG00000010122) #22	nme7 (ENSFHEG00000010170) #23	zgc:172121 (ENSFHEG00000010218)	BIVM (ENSFHEG00000010250)	si:ch211-201h21.5 (ENSFHEG00000010272)	TMEM131 (ENSFHEG00000010417)	CNGA3 (ENSFHEG00000010460)	ube3a (ENSFHEG00000010525)	ATP10A (ENSFHEG00000010635)	GABRB3 (ENSFHEG00000010670)	GABRA5 (ENSFHEG00000010673)	GABRG3 (ENSFHEG00000000243)	OCA2 (ENSFHEG00000011165)	HERC2 (ENSFHEG00000011436)	nipa1 (ENSFHEG00000011451)	nipa2 (ENSFHEG00000011505)
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b	ENSGT00390000001289.b.a	ENSGT00940000160861	ENSGT00940000153460.c.b.c.a	ENSGT00940000154833.b	ENSGT00950000182941.b.a	ENSGT00940000177286	ENSGT01030000234935	ENSGT00940000156341.e.b	ENSGT00940000174529	ENSGT01100000263502.A.a.a.a.a.a	ENSGT00510000051633	ENSGT01030000234579.C.m #22	ENSGT00940000158723	ENSGT00940000165126	ENSGT00940000163390	ENSGT00940000162539	ENSGT00940000160788	ENSGT00940000165969	ENSGT00940000163347	ENSGT00940000166780	ENSGT00940000156974.e.a	ENSGT00940000158878	ENSGT00940000162359	ENSGT01030000234621.C.a.a.a	ENSGT00940000166245	ENSGT00950000182887.C.b.b.b	ENSGT00940000163684
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES	15	arl13a (ENSXMAG00000013485)	tmem35 (ENSXMAG00000013483)	CENPI (ENSXMAG00000013478)	drp2 (ENSXMAG00000013469)	ENSXMAG00000013464	taf7 (ENSXMAG00000013459)	slc9a6a (ENSXMAG00000013445)	fhl1a (ENSXMAG00000013439)	MAP7D3 (ENSXMAG00000013428)	ENSXMAG00000023657	ENSXMAG00000026572	ENSXMAG00000023492	tmtops3a (ENSXMAG00000027088)	ENSXMAG00000025432	ENSXMAG00000026549 #22	ENSXMAG00000019519 #22	ARHGEF6 (ENSXMAG00000013408)	ENSXMAG00000025982	ENSXMAG00000028789	ENSXMAG00000028158	rbmx (ENSXMAG00000013407)	ENSXMAG00000026732	GPR101 (ENSXMAG00000023266)	zic3 (ENSXMAG00000013404)	zic6 (ENSXMAG00000013401)	ENSXMAG00000022835	f9a (ENSXMAG00000013387)	MCF2 (ENSXMAG00000013325)	ATP11C (ENSXMAG00000013304)	sox3 (ENSXMAG00000019515)	ENSXMAG00000026426
Platyfish	MODERN SPECIES	15	sox3 (ENSXMAG00000019515)	ATP11C (ENSXMAG00000013304)	MCF2 (ENSXMAG00000013325)	f9a (ENSXMAG00000013387)	ENSXMAG00000022835	zic6 (ENSXMAG00000013401)	zic3 (ENSXMAG00000013404)	GPR101 (ENSXMAG00000023266)	ENSXMAG00000026732	rbmx (ENSXMAG00000013407)	ENSXMAG00000028158	ENSXMAG00000028789	ENSXMAG00000025982	ARHGEF6 (ENSXMAG00000013408)	ENSXMAG00000019519 #22	ENSXMAG00000026549 #22	ENSXMAG00000025432	tmtops3a (ENSXMAG00000027088)	ENSXMAG00000023492	ENSXMAG00000026572	ENSXMAG00000023657	MAP7D3 (ENSXMAG00000013428)	fhl1a (ENSXMAG00000013439)	slc9a6a (ENSXMAG00000013445)	taf7 (ENSXMAG00000013459)	ENSXMAG00000013464	drp2 (ENSXMAG00000013469)	CENPI (ENSXMAG00000013478)	tmem35 (ENSXMAG00000013483)	arl13a (ENSXMAG00000013485)	xkrx (ENSXMAG00000026827)
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Guppy	DUPLICATION
Guppy	MODERN SPECIES	456	im:7152348 (ENSPREG00000015914)	cep63 (ENSPREG00000015922)	amotl2a (ENSPREG00000015945)	ENSPREG00000015963	sap130a (ENSPREG00000015981)	ENSPREG00000016073	GPR17 (ENSPREG00000016357)	INPP5D (ENSPREG00000016395)	smx5 (ENSPREG00000016534)	bcl6aa (ENSPREG00000016542)	lpp (ENSPREG00000016583)	tprg1 (ENSPREG00000016606)	tp63 (ENSPREG00000016639)	ENSPREG00000016663	dpt (ENSPREG00000016712) #21	ATP1B1 (ENSPREG00000016726) #22	nme7 (ENSPREG00000016758) #23	zgc:172121 (ENSPREG00000016924)	BIVM (ENSPREG00000016951)	si:ch211-201h21.5 (ENSPREG00000016966)	TMEM131 (ENSPREG00000016983)	CNGA3 (ENSPREG00000017037)	ube3a (ENSPREG00000017057)	ATP10A (ENSPREG00000017091)	GABRB3 (ENSPREG00000017132)	GABRA5 (ENSPREG00000017152)	GABRG3 (ENSPREG00000017169)	OCA2 (ENSPREG00000017194)	ENSPREG00000017229	ENSPREG00000017320	nipa1 (ENSPREG00000017336)
Guppy	MODERN SPECIES	440	xkrx (ENSPREG00000011444)	arl13a (ENSPREG00000011435)	tmem35 (ENSPREG00000011425)	CENPI (ENSPREG00000011396)	drp2 (ENSPREG00000011351)	ENSPREG00000011339	taf7 (ENSPREG00000011318)	slc9a6a (ENSPREG00000010943)	fhl1a (ENSPREG00000010837)	MAP7D3 (ENSPREG00000010713)	ENSPREG00000010672	ENSPREG00000010601	ENSPREG00000010594	tmtops3a (ENSPREG00000010554)	ENSPREG00000010544	ENSPREG00000010435 #22	ARHGEF6 (ENSPREG00000010318)	rbmx (ENSPREG00000010279)	ENSPREG00000010224	GPR101 (ENSPREG00000010211)	zic3 (ENSPREG00000010196)	zic6 (ENSPREG00000010190)	ENSPREG00000010173	ENSPREG00000010143	f9a (ENSPREG00000010128)	MCF2 (ENSPREG00000009991)	ATP11C (ENSPREG00000009780)	sox3 (ENSPREG00000009674)	P2RY4 (ENSPREG00000009653)	inppl1b (ENSPREG00000009614)	arr3b (ENSPREG00000009561)
NAME_6	DUPLICATION
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	41	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b	ENSGT00390000001289.b.a	ENSGT00940000160861	ENSGT00940000153460.c.b.c.a	ENSGT00940000154833.b	ENSGT00950000182941.b.a	ENSGT00940000153259.b	ENSGT00940000156341.e.b	ENSGT00390000011545	ENSGT00940000174529	ENSGT01100000263502.A.a.a.a.a.a	ENSGT00510000051633	ENSGT01030000234579.C.m.g.a #22	ENSGT00940000158723	ENSGT00940000165126	ENSGT00940000163390	ENSGT00940000162539	ENSGT00940000160788	ENSGT00940000165969	ENSGT00940000163347	ENSGT00940000166780	ENSGT00940000156974.e.a	ENSGT00940000158878	ENSGT00940000162359	ENSGT01030000234621.C.a.a.a	ENSGT00940000166245	ENSGT00950000182887.C.b.b.b	ENSGT00940000163684
Amazon molly	MODERN SPECIES	319						ENSPFOG00000013993	taf7 (ENSPFOG00000013936)	slc9a6a (ENSPFOG00000013751)	fhl1a (ENSPFOG00000013665)	MAP7D3 (ENSPFOG00000013582)	ENSPFOG00000022475	ENSPFOG00000013554	si:dkeyp-11e3.1 (ENSPFOG00000013547)	tmtops3a (ENSPFOG00000013512)	ENSPFOG00000013500	ENSPFOG00000013494 #22	ARHGEF6 (ENSPFOG00000013258)	rbmx (ENSPFOG00000013193)	ENSPFOG00000013006	GPR101 (ENSPFOG00000020751)	zic3 (ENSPFOG00000012982)	zic6 (ENSPFOG00000012980)	ENSPFOG00000012874	f9a (ENSPFOG00000012785)	MCF2 (ENSPFOG00000024422)	ATP11C (ENSPFOG00000011940)	sox3 (ENSPFOG00000020750)	P2RY4 (ENSPFOG00000011890)	inppl1b (ENSPFOG00000011714)	arr3b (ENSPFOG00000011486)	RAB41 (ENSPFOG00000011424)
Sailfin molly	MODERN SPECIES	159							taf7 (ENSPLAG00000009636)	slc9a6a (ENSPLAG00000009677)	fhl1a (ENSPLAG00000009715)	ENSPLAG00000009726	ENSPLAG00000009743	ENSPLAG00000009747	ENSPLAG00000009755	tmtops3a (ENSPLAG00000000221)	ENSPLAG00000009796	ENSPLAG00000010051 #22	ENSPLAG00000010318 #22	ARHGEF6 (ENSPLAG00000010443)	rbmx (ENSPLAG00000010472)	ENSPLAG00000010526	GPR101 (ENSPLAG00000010542)	zic3 (ENSPLAG00000010556)	zic6 (ENSPLAG00000010562)	ENSPLAG00000010589	f9a (ENSPLAG00000000241)
NAME_6	ANCESTRAL SPECIES																	ENSGT01030000234579.C.m.g.b #22
Sailfin molly	MODERN SPECIES	159								f9a (ENSPLAG00000000241)	ENSPLAG00000010589	zic6 (ENSPLAG00000010562)	zic3 (ENSPLAG00000010556)	GPR101 (ENSPLAG00000010542)	ENSPLAG00000010526	rbmx (ENSPLAG00000010472)	ARHGEF6 (ENSPLAG00000010443)	ENSPLAG00000010318 #22	ENSPLAG00000010051 #22	ENSPLAG00000009796	tmtops3a (ENSPLAG00000000221)	ENSPLAG00000009755	ENSPLAG00000009747	ENSPLAG00000009743	ENSPLAG00000009726	fhl1a (ENSPLAG00000009715)	slc9a6a (ENSPLAG00000009677)	taf7 (ENSPLAG00000009636)
NAME_6	ANCESTRAL SPECIES	15	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m.h #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067
Sailfin molly	MODERN SPECIES	1415													tp63 (ENSPLAG00000007307)	zbtb11 (ENSPLAG00000007331)	dpt (ENSPLAG00000007342) #21	ATP1B1 (ENSPLAG00000007350) #22	nme7 (ENSPLAG00000007360) #23	zgc:172121 (ENSPLAG00000007377)
Amazon molly	MODERN SPECIES	529	rab6ba (ENSPFOG00000003742)	im:7152348 (ENSPFOG00000003736)	cep63 (ENSPFOG00000003641)	amotl2a (ENSPFOG00000003541)	sap130a (ENSPFOG00000003244)	ENSPFOG00000002019	GPR17 (ENSPFOG00000020959)	INPP5D (ENSPFOG00000021881)	smx5 (ENSPFOG00000001621)	bcl6aa (ENSPFOG00000001561)	lpp (ENSPFOG00000001466)	tprg1 (ENSPFOG00000001285)	tp63 (ENSPFOG00000000910)	ENSPFOG00000000687	dpt (ENSPFOG00000000620) #21	ATP1B1 (ENSPFOG00000000553) #22	nme7 (ENSPFOG00000000431) #23	zgc:172121 (ENSPFOG00000000396)	BIVM (ENSPFOG00000000352)	si:ch211-201h21.5 (ENSPFOG00000000336)	TMEM131 (ENSPFOG00000000186)	CNGA3 (ENSPFOG00000000150)	ube3a (ENSPFOG00000000124)
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000156074.b	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Tetraodontidae	ANCESTRAL SPECIES	27	ENSGT00940000156166.a.i.b	ENSGT00940000153846.a.a	ENSGT00950000183210.g.a	ENSGT00390000006452.b.b.g	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Tetraodon	MODERN SPECIES		gfi1ab (ENSTNIG00000000651)	EVI5 (ENSTNIG00000013763)	rpl5b (ENSTNIG00000013764)	DIPK1A (ENSTNIG00000013765)	sap130a (ENSTNIG00000013766)	ENSTNIG00000013767	GPR17 (ENSTNIG00000013768)	ENSTNIG00000013769	smx5 (ENSTNIG00000013770)	bcl6aa (ENSTNIG00000013771)	lpp (ENSTNIG00000013772)	tprg1 (ENSTNIG00000013773)	tp63 (ENSTNIG00000013774)	zbtb11 (ENSTNIG00000013775)	dpt (ENSTNIG00000013776) #21	ATP1B1 (ENSTNIG00000013777) #22	nme7 (ENSTNIG00000013778) #23	zgc:172121 (ENSTNIG00000013779)	BIVM (ENSTNIG00000013780)	si:ch211-201h21.5 (ENSTNIG00000013781)	TMEM131 (ENSTNIG00000013782)	CNGA3 (ENSTNIG00000013783)	ube3a (ENSTNIG00000013784)	ATP10A (ENSTNIG00000013785)	GABRB3 (ENSTNIG00000010648)	GABRA5 (ENSTNIG00000010649)	GABRG3 (ENSTNIG00000010650)	OCA2 (ENSTNIG00000010651)	HERC2 (ENSTNIG00000010652)	nipa1 (ENSTNIG00000010653)	nipa2 (ENSTNIG00000010654)
Fugu	MODERN SPECIES	12	C1orf146 (ENSTRUG00000020683)	glmnb (ENSTRUG00000000383)	gfi1ab (ENSTRUG00000000415)	EVI5 (ENSTRUG00000000437)	rpl5b (ENSTRUG00000000524)	DIPK1A (ENSTRUG00000000590)	sap130a (ENSTRUG00000000628)	ENSTRUG00000000755	GPR17 (ENSTRUG00000001244)	INPP5D (ENSTRUG00000001313)	bcl6aa (ENSTRUG00000002214)	lpp (ENSTRUG00000002677)	tprg1 (ENSTRUG00000003153)	tp63 (ENSTRUG00000003420)	zbtb11 (ENSTRUG00000004329)	ATP1B1 (ENSTRUG00000023651) #22	dpt (ENSTRUG00000023954) #21	nme7 (ENSTRUG00000019681) #23	ENSTRUG00000030706	zgc:172121 (ENSTRUG00000005847)	BIVM (ENSTRUG00000005881)	si:ch211-201h21.5 (ENSTRUG00000006027)	TMEM131 (ENSTRUG00000006114)	CNGA3 (ENSTRUG00000006545)	ube3a (ENSTRUG00000006748)	ENSTRUG00000031703	ENSTRUG00000033259	ATP10A (ENSTRUG00000007000)	GABRB3 (ENSTRUG00000007550)	GABRA5 (ENSTRUG00000008335)	GABRG3 (ENSTRUG00000008857)
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Ballan wrasse	MODERN SPECIES	2	rab6ba (ENSLBEG00000026930)	im:7152348 (ENSLBEG00000026920)	ENSLBEG00000026908	amotl2a (ENSLBEG00000026890)	sap130a (ENSLBEG00000026766)	ENSLBEG00000026247	GPR17 (ENSLBEG00000025993)	INPP5D (ENSLBEG00000025835)	smx5 (ENSLBEG00000025781)	bcl6aa (ENSLBEG00000025751)	lpp (ENSLBEG00000025728)	tprg1 (ENSLBEG00000025715)	tp63 (ENSLBEG00000025637)	zbtb11 (ENSLBEG00000025568)	dpt (ENSLBEG00000025552) #21	ATP1B1 (ENSLBEG00000025529) #22	nme7 (ENSLBEG00000025504) #23	zgc:172121 (ENSLBEG00000025460)	BIVM (ENSLBEG00000025429)	plekhb2 (ENSLBEG00000025392)	si:ch211-201h21.5 (ENSLBEG00000025371)	TMEM131 (ENSLBEG00000025261)	CNGA3 (ENSLBEG00000025206)	ube3a (ENSLBEG00000025168)	ATP10A (ENSLBEG00000025124)	GABRB3 (ENSLBEG00000025070)	GABRA5 (ENSLBEG00000025020)	GABRG3 (ENSLBEG00000024966)	OCA2 (ENSLBEG00000024910)	HERC2 (ENSLBEG00000024711)	nipa1 (ENSLBEG00000024639)
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Large yellow croaker	MODERN SPECIES	489	ryk (ENSLCRG00005012617)	SLCO2A1 (ENSLCRG00005012607)	rab6ba (ENSLCRG00005012594)	cep63 (ENSLCRG00005012589)	amotl2a (ENSLCRG00005012586)	sap130a (ENSLCRG00005012045)	MYO7B (ENSLCRG00005011902)	GPR17 (ENSLCRG00005011898)	INPP5D (ENSLCRG00005010799)	smx5 (ENSLCRG00005010796)	bcl6aa (ENSLCRG00005010795)	lpp (ENSLCRG00005010790)	tprg1 (ENSLCRG00005010789)	tp63 (ENSLCRG00005009353)	ENSLCRG00005009342	ATP1B1 (ENSLCRG00005009340) #22	zgc:172121 (ENSLCRG00005009338)	nme7 (ENSLCRG00005009336) #23	BIVM (ENSLCRG00005009328)	si:ch211-201h21.5 (ENSLCRG00005009325)	TMEM131 (ENSLCRG00005009085)	CNGA3 (ENSLCRG00005009079)	ube3a (ENSLCRG00005009077)	ATP10A (ENSLCRG00005008878)	GABRB3 (ENSLCRG00005008625)	GABRA5 (ENSLCRG00005008610)	GABRG3 (ENSLCRG00005008606)	OCA2 (ENSLCRG00005008588)	HERC2 (ENSLCRG00005007758)	nipa1 (ENSLCRG00005007730)	nipa2 (ENSLCRG00005007728)
European seabass	MODERN SPECIES	17	ENSDLAG00005021135	rab6ba (ENSDLAG00005021105)	im:7152348 (ENSDLAG00005021103)	cep63 (ENSDLAG00005021100)	amotl2a (ENSDLAG00005021094)	sap130a (ENSDLAG00005020281)	ENSDLAG00005019729	ENSDLAG00005019662	smx5 (ENSDLAG00005019631)	bcl6aa (ENSDLAG00005019592)	lpp (ENSDLAG00005019565)	tprg1 (ENSDLAG00005019556)	ENSDLAG00005019244	DPT (ENSDLAG00005019220) #21	ENSDLAG00005019354	ENSDLAG00005031886 #22	nme7 (ENSDLAG00005032296) #23	zgc:172121 (ENSDLAG00005019073)	ENSDLAG00005032059	si:ch211-201h21.5 (ENSDLAG00005032019)	ENSDLAG00005017985	ENSDLAG00005017939	ube3a (ENSDLAG00005017855)	ATP10A (ENSDLAG00005017439)	GABRB3 (ENSDLAG00005017323)	GABRA5 (ENSDLAG00005017107)	GABRG3 (ENSDLAG00005017038)	OCA2 (ENSDLAG00005016571)	HERC2 (ENSDLAG00005015382)	nipa1 (ENSDLAG00005027537)	nipa2 (ENSDLAG00005034296)
Gilthead seabream	MODERN SPECIES	2	SLCO2A1 (ENSSAUG00010002037)	rab6ba (ENSSAUG00010002059)	im:7152348 (ENSSAUG00010002072)	cep63 (ENSSAUG00010002079)	amotl2a (ENSSAUG00010002085)	sap130a (ENSSAUG00010002193)	MYO7B (ENSSAUG00010005738)	GPR17 (ENSSAUG00010007403)	INPP5D (ENSSAUG00010007412)	smx5 (ENSSAUG00010007481)	bcl6aa (ENSSAUG00010007482)	lpp (ENSSAUG00010007485)	tp63 (ENSSAUG00010007523)	ENSSAUG00010008653	dpt (ENSSAUG00010008673) #21	ATP1B1 (ENSSAUG00010008677) #22	nme7 (ENSSAUG00010008680) #23	zgc:172121 (ENSSAUG00010008722)	BIVM (ENSSAUG00010008723)	si:ch211-201h21.5 (ENSSAUG00010008724)	TMEM131 (ENSSAUG00010008738)	CNGA3 (ENSSAUG00010010177)	ube3a (ENSSAUG00010010179)	ATP10A (ENSSAUG00010010224)	GABRB3 (ENSSAUG00010010416)	GABRA5 (ENSSAUG00010011351)	GABRG3 (ENSSAUG00010011353)	OCA2 (ENSSAUG00010011481)	HERC2 (ENSSAUG00010012272)	nipa1 (ENSSAUG00010012667)	nipa2 (ENSSAUG00010012674)
Perciformes	ANCESTRAL SPECIES	8	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00940000159571	ENSGT00390000010568	ENSGT01050000244887.A.a.b	ENSGT00940000159554	ENSGT00940000157967	ENSGT00390000007310	ENSGT01050000244924.a.a.b.a.a	ENSGT00940000160040.B.a.b	ENSGT00940000159889.b.a	ENSGT00400000024256	ENSGT00940000160006	ENSGT00530000064649	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Lumpfish	MODERN SPECIES	19	ENSCLMG00005006820	PTBP1 (ENSCLMG00005006492)	EFNA2 (ENSCLMG00005006490)	ENSCLMG00005006489	ENSCLMG00005006488	ENSCLMG00005006487	camk4 (ENSCLMG00005006466)	ENSCLMG00005006465	GADD45B (ENSCLMG00005006178)	ENSCLMG00005006177	ENSCLMG00005006176	ENSCLMG00005006175	tp63 (ENSCLMG00005006130)	zbtb11 (ENSCLMG00005006128)	dpt (ENSCLMG00005006127) #21	ATP1B1 (ENSCLMG00005006063) #22	nme7 (ENSCLMG00005005477) #23	ENSCLMG00005005472	zgc:172121 (ENSCLMG00005005470)	si:ch211-201h21.5 (ENSCLMG00005005460)	TMEM131 (ENSCLMG00005003152)	ENSCLMG00005002752	ube3a (ENSCLMG00005002745)	ATP10A (ENSCLMG00005002585)	GABRB3 (ENSCLMG00005002577)	GABRA5 (ENSCLMG00005002576)	ENSCLMG00005002575	GABRG3 (ENSCLMG00005002480)	OCA2 (ENSCLMG00005002479)	nipa1 (ENSCLMG00005002220)	nipa2 (ENSCLMG00005002218)
Stickleback	MODERN SPECIES	8	dph5 (ENSGACG00000013535)	s1pr1 (ENSGACG00000013537)	zbtb37 (ENSGACG00000013541)	serpinc1 (ENSGACG00000013542)	stil (ENSGACG00000013582)	ptbp1b (ENSGACG00000013587)	ENSGACG00000013592	camk4 (ENSGACG00000013599)	fam174c (ENSGACG00000013613)	gadd45ba (ENSGACG00000013618)	tp63 (ENSGACG00000013629)	ENSGACG00000013632	zbtb11 (ENSGACG00000013636)	ENSGACG00000013644	dpt (ENSGACG00000013645) #21	ATP1B1 (ENSGACG00000013647) #22	nme7 (ENSGACG00000013658) #23	zgc:172121 (ENSGACG00000013681)	BIVM (ENSGACG00000013697)	TMEM131 (ENSGACG00000013702)	CNGA3 (ENSGACG00000013729)	ube3a (ENSGACG00000013744)	ATP10A (ENSGACG00000013748)	GABRB3 (ENSGACG00000013753)	GABRA5 (ENSGACG00000013764)	GABRG3 (ENSGACG00000013771)	ENSGACG00000013776	nipa1 (ENSGACG00000013786)	nipa2 (ENSGACG00000013790)	cyfip1 (ENSGACG00000013804)	tubgcp5 (ENSGACG00000013824)
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Pike perch	MODERN SPECIES	26	im:7152348 (ENSSLUG00000005610)	ENSSLUG00000005617	amotl2a (ENSSLUG00000005629)	sap130a (ENSSLUG00000005735)	ENSSLUG00000007482	ENSSLUG00000007505	GPR17 (ENSSLUG00000007526)	INPP5D (ENSSLUG00000007543)	smx5 (ENSSLUG00000007580)	bcl6aa (ENSSLUG00000007595)	lpp (ENSSLUG00000007610)	tprg1 (ENSSLUG00000007669)	tp63 (ENSSLUG00000007713)	ENSSLUG00000008373	dpt (ENSSLUG00000008398) #21	ATP1B1 (ENSSLUG00000008408) #22	nme7 (ENSSLUG00000008473) #23	zgc:172121 (ENSSLUG00000009082)	BIVM (ENSSLUG00000009102)	si:ch211-201h21.5 (ENSSLUG00000009126)	TMEM131 (ENSSLUG00000009175)
Channel bull blenny	MODERN SPECIES	18	OCA2 (ENSCGOG00000000766)	GABRG3 (ENSCGOG00000000748)	GABRA5 (ENSCGOG00000000442)	GABRB3 (ENSCGOG00000000349)	ENSCGOG00000000345	ATP10A (ENSCGOG00000000306)	ENSCGOG00000000294	si:ch211-201h21.5 (ENSCGOG00000000292)	BIVM (ENSCGOG00000000290)	ENSCGOG00000000288	zgc:172121 (ENSCGOG00000000286)	ENSCGOG00000000285	tp63 (ENSCGOG00000000256)	zbtb11 (ENSCGOG00000000226)	dpt (ENSCGOG00000000217) #21	ATP1B1 (ENSCGOG00000000207) #22	nme7 (ENSCGOG00000000124) #23	zgc:172121 (ENSCGOG00000014855)	BIVM (ENSCGOG00000014849)	si:ch211-201h21.5 (ENSCGOG00000014841)	TMEM131 (ENSCGOG00000014716)	CNGA3 (ENSCGOG00000014710)	ube3a (ENSCGOG00000013962)	CARTPT (ENSCGOG00000013953)	ENSCGOG00000013947	ENSCGOG00000013767	ENSCGOG00000013753	ENSCGOG00000013751	ENSCGOG00000013749	EFNA2 (ENSCGOG00000013746)	PTBP1 (ENSCGOG00000013058)
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000154713.A.d	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00940000170731	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT00940000166878	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Climbing perch	MODERN SPECIES	17	im:7152348 (ENSATEG00000010708)	cep63 (ENSATEG00000010724)	amotl2a (ENSATEG00000010780)	sap130a (ENSATEG00000010816)	ENSATEG00000029618	ENSATEG00000010908	ENSATEG00000011346	ENSATEG00000011360	smx5 (ENSATEG00000027281)	bcl6aa (ENSATEG00000011384)	lpp (ENSATEG00000011442)	tprg1 (ENSATEG00000011483)	tp63 (ENSATEG00000011498)	ENSATEG00000011539	dpt (ENSATEG00000011551) #21	ENSATEG00000029473 #22	nme7 (ENSATEG00000011614) #23	zgc:172121 (ENSATEG00000030161)	ENSATEG00000011710	si:ch211-201h21.5 (ENSATEG00000011731)	ENSATEG00000011746	ENSATEG00000011786	ube3a (ENSATEG00000011812)	ATP10A (ENSATEG00000011849)	GABRB3 (ENSATEG00000028000)	GABRA5 (ENSATEG00000011949)	GABRG3 (ENSATEG00000011974)	OCA2 (ENSATEG00000012000)	HERC2 (ENSATEG00000012078)	nipa1 (ENSATEG00000012387)	nipa2 (ENSATEG00000012354)
Siamese fighting fish	MODERN SPECIES	15	rab6ba (ENSBSLG00000001271)	im:7152348 (ENSBSLG00000001234)	ENSBSLG00000001223	cep63 (ENSBSLG00000001204)	amotl2a (ENSBSLG00000000887)	sap130a (ENSBSLG00000000840)	MYO7B (ENSBSLG00000000736)	ENSBSLG00000000724	INPP5D (ENSBSLG00000000668)	smx5 (ENSBSLG00000000623)	bcl6aa (ENSBSLG00000000520)	lpp (ENSBSLG00000003550)	tp63 (ENSBSLG00000003548)	ENSBSLG00000003540	dpt (ENSBSLG00000003537) #21	ATP1B1 (ENSBSLG00000003535) #22	nme7 (ENSBSLG00000003531) #23	zgc:172121 (ENSBSLG00000003528)	BIVM (ENSBSLG00000003527)	si:ch211-201h21.5 (ENSBSLG00000003526)	TMEM131 (ENSBSLG00000003525)	CNGA3 (ENSBSLG00000003523)	ube3a (ENSBSLG00000003522)	ATP10A (ENSBSLG00000003517)	GABRB3 (ENSBSLG00000003516)	GABRA5 (ENSBSLG00000003515)	GABRG3 (ENSBSLG00000003514)	OCA2 (ENSBSLG00000003513)	nipa1 (ENSBSLG00000003508)	nipa2 (ENSBSLG00000003506)	ENSBSLG00000003505
Zig-zag eel	MODERN SPECIES	18	rab6ba (ENSMAMG00000009672)	im:7152348 (ENSMAMG00000009694)	cep63 (ENSMAMG00000009707)	amotl2a (ENSMAMG00000009725)	sap130a (ENSMAMG00000009735)	ENSMAMG00000009766	ENSMAMG00000009981	ENSMAMG00000009985	smx5 (ENSMAMG00000010053)	bcl6aa (ENSMAMG00000010010)	lpp (ENSMAMG00000010067)	tprg1 (ENSMAMG00000026771)	tp63 (ENSMAMG00000010142)	ENSMAMG00000010180	dpt (ENSMAMG00000010188) #21	ENSMAMG00000010199 #22	nme7 (ENSMAMG00000010221) #23	zgc:172121 (ENSMAMG00000010289)	ENSMAMG00000010277	si:ch211-201h21.5 (ENSMAMG00000010357)	ENSMAMG00000010374	ENSMAMG00000010447	ube3a (ENSMAMG00000010466)	ATP10A (ENSMAMG00000010499)	GABRB3 (ENSMAMG00000010538)	ENSMAMG00000028500	GABRA5 (ENSMAMG00000010573)	GABRG3 (ENSMAMG00000011836)	OCA2 (ENSMAMG00000011871)	HERC2 (ENSMAMG00000012094)	nipa1 (ENSMAMG00000012243)
Carangaria	ANCESTRAL SPECIES	7	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00910000148238	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Seriola	ANCESTRAL SPECIES	139												ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00390000000568	ENSGT00390000008489	ENSGT00940000160274	ENSGT00390000011943.b	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b	ENSGT00940000156968	ENSGT00950000182916.b
Yellowtail amberjack	MODERN SPECIES	2801																ATP1B1 (ENSSLDG00000014130) #22	nme7 (ENSSLDG00000014100) #23	zgc:172121 (ENSSLDG00000014067)	BIVM (ENSSLDG00000014041)	si:ch211-201h21.5 (ENSSLDG00000014023)	TMEM131 (ENSSLDG00000013977)	CNGA3 (ENSSLDG00000013910)	ube3a (ENSSLDG00000013860)	TRAPPC8 (ENSSLDG00000013797)	commd2 (ENSSLDG00000013762)	lmnb2 (ENSSLDG00000013615)	rpl36 (ENSSLDG00000013576)	pde6d (ENSSLDG00000013554)	phb2b (ENSSLDG00000013525)	lrrc40 (ENSSLDG00000013462)	ENSSLDG00000013421
Greater amberjack	MODERN SPECIES	234												tprg1 (ENSSDUG00000008988)	tp63 (ENSSDUG00000009041)	ENSSDUG00000009123	dpt (ENSSDUG00000009134) #21	ATP1B1 (ENSSDUG00000009143) #22	nme7 (ENSSDUG00000009171) #23	zgc:172121 (ENSSDUG00000009212)	BIVM (ENSSDUG00000009239)	si:ch211-201h21.5 (ENSSDUG00000009255)	TMEM131 (ENSSDUG00000009276)	CNGA3 (ENSSDUG00000009340)	ube3a (ENSSDUG00000009378)	TRAPPC8 (ENSSDUG00000009433)	commd2 (ENSSDUG00000009619)	ENSSDUG00000009633	lmnb2 (ENSSDUG00000009647)	rpl36 (ENSSDUG00000009676)	pde6d (ENSSDUG00000009693)	phb2b (ENSSDUG00000009706)	lrrc40 (ENSSDUG00000009744)
Barramundi perch	MODERN SPECIES	106	cep63 (ENSLCAG00010011009)	amotl2a (ENSLCAG00010011012)	sap130a (ENSLCAG00010011094)	ENSLCAG00010011556	GPR17 (ENSLCAG00010011778)	INPP5D (ENSLCAG00010011836)	smx5 (ENSLCAG00010012098)	bcl6aa (ENSLCAG00010012103)	lpp (ENSLCAG00010012106)	tprg1 (ENSLCAG00010012113)	tp63 (ENSLCAG00010012159)	ENSLCAG00010012299	ENSLCAG00010012309	ENSLCAG00010012311	dpt (ENSLCAG00010012319) #21	ATP1B1 (ENSLCAG00010012327) #22	nme7 (ENSLCAG00010012402) #23	zgc:172121 (ENSLCAG00010012655)	BIVM (ENSLCAG00010012659)	si:ch211-201h21.5 (ENSLCAG00010012663)	TMEM131 (ENSLCAG00010012812)	CNGA3 (ENSLCAG00010013347)	ENSLCAG00010013349	ube3a (ENSLCAG00010013353)	ATP10A (ENSLCAG00010013380)	GABRB3 (ENSLCAG00010013423)	GABRA5 (ENSLCAG00010013480)	GABRG3 (ENSLCAG00010013639)	OCA2 (ENSLCAG00010013690)	nipa1 (ENSLCAG00010014047)	nipa2 (ENSLCAG00010014048)
Pleuronectoidei	ANCESTRAL SPECIES	40	ENSGT00940000159656.a.a	ENSGT00730000112922	ENSGT00940000153190.B.b	ENSGT00940000156577.a	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a	ENSGT00390000016597	ENSGT00940000156311.b.a	ENSGT00940000156022.b	ENSGT00390000001652.f.b	ENSGT00950000183153.c.b.a.a	ENSGT00900000141090.t	ENSGT00390000010760.f #21	ENSGT01030000234579.C.m #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00510000048601.a	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g	ENSGT00940000155050.a	ENSGT00940000157895	ENSGT00940000154713.A.c.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724	ENSGT00940000159067	ENSGT00940000155651	ENSGT00940000165545
Turbot	MODERN SPECIES	3	rab6ba (ENSSMAG00000001615)	im:7152348 (ENSSMAG00000001607)	cep63 (ENSSMAG00000001562)	amotl2a (ENSSMAG00000001543)	sap130a (ENSSMAG00000001505)	ENSSMAG00000001171	ENSSMAG00000001164	ENSSMAG00000001138	smx5 (ENSSMAG00000026432)	bcl6aa (ENSSMAG00000001102)	lpp (ENSSMAG00000001016)	tprg1 (ENSSMAG00000001003)	tp63 (ENSSMAG00000000978)	zbtb11 (ENSSMAG00000000940)	dpt (ENSSMAG00000000904) #21	ENSSMAG00000000869 #22	nme7 (ENSSMAG00000000794) #23	zgc:172121 (ENSSMAG00000000754)	ENSSMAG00000020264	si:ch211-201h21.5 (ENSSMAG00000020261)	ENSSMAG00000020195	ENSSMAG00000020180	ube3a (ENSSMAG00000020159)	ATP10A (ENSSMAG00000020092)	GABRB3 (ENSSMAG00000020084)	GABRA5 (ENSSMAG00000020075)	GABRG3 (ENSSMAG00000020062)	OCA2 (ENSSMAG00000019891)	ENSSMAG00000023444	ENSSMAG00000021741	HERC2 (ENSSMAG00000019814)
Tongue sole	MODERN SPECIES	11	mpnd (ENSCSEG00000003230)	sh3gl1b (ENSCSEG00000003235)	rorca (ENSCSEG00000003244)	SEMA6B (ENSCSEG00000003255)	ENSCSEG00000003279	ENSCSEG00000003292	plin3 (ENSCSEG00000003294)	rgl1 (ENSCSEG00000003296)	colgalt2b (ENSCSEG00000003304)	zgc:92140 (ENSCSEG00000003310)	EDEM3 (ENSCSEG00000003313)	ENSCSEG00000003321	ENSCSEG00000003325	dpt (ENSCSEG00000003326) #21	nme7 (ENSCSEG00000003330) #23	ATP1B1 (ENSCSEG00000003338) #22	ube3a (ENSCSEG00000003344)	CNGA3 (ENSCSEG00000003357)	TMEM131 (ENSCSEG00000003378)	si:ch211-201h21.5 (ENSCSEG00000003423)	BIVM (ENSCSEG00000003425)	zgc:172121 (ENSCSEG00000003431)	ENSCSEG00000003435	b3gnt5a (ENSCSEG00000003444)	ect2 (ENSCSEG00000003447)	ENSCSEG00000003458	lnx1 (ENSCSEG00000003465)	gsx2 (ENSCSEG00000003487)	pdgfra (ENSCSEG00000003502)	ENSCSEG00000003542	kdr (ENSCSEG00000003569)
Cod	MODERN SPECIES	3	ENSGMOG00000017860	ENSGMOG00000029443	ENSGMOG00000030086	ENSGMOG00000032479	ENSGMOG00000032659	ENSGMOG00000009134	ENSGMOG00000007614	dmap1 (ENSGMOG00000007604)	ENSGMOG00000007589	guk1b (ENSGMOG00000007582)	guk1b (ENSGMOG00000025995)	ENSGMOG00000023277	ENSGMOG00000037241	zbtb11 (ENSGMOG00000003866)	dpt (ENSGMOG00000003950) #21	ENSGMOG00000024366 #22	nme7 (ENSGMOG00000003984) #23	zgc:172121 (ENSGMOG00000004019)	ENSGMOG00000004041	si:ch211-201h21.5 (ENSGMOG00000004089)	ENSGMOG00000004175	ENSGMOG00000004260	ube3a (ENSGMOG00000004287)	ATP10A (ENSGMOG00000004322)	GABRB3 (ENSGMOG00000004379)	GABRA5 (ENSGMOG00000004398)	GABRG3 (ENSGMOG00000004418)	OCA2 (ENSGMOG00000025247)	HERC2 (ENSGMOG00000031186)	nipa1 (ENSGMOG00000004503)	nipa2 (ENSGMOG00000004520)
Acanthomorphata	ANCESTRAL SPECIES	309												ENSGT00940000164470.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00510000047120.gb #12	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507
Euacanthomorphacea	ANCESTRAL SPECIES	150														ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000169304	ENSGT00390000017193	ENSGT00390000006347.b
Pinecone sodierfish	MODERN SPECIES	11												ENSMMDG00005000928	ENSMMDG00005000929	dynlt2b (ENSMMDG00005000930)	ENSMMDG00005000932	atp1b1b (ENSMMDG00005000936) #22	ENSMMDG00005000937	atg13 (ENSMMDG00005000941)	DGKZ (ENSMMDG00005000978)	mdka (ENSMMDG00005002030)	CHRM4 (ENSMMDG00005002055)	ENSMMDG00005002061 #13	SLC19A2 (ENSMMDG00005002065) #26	atg3 (ENSMMDG00005002090)	ENSMMDG00005002119	GJA1 (ENSMMDG00005002151)	ENSMMDG00005002158	ENSMMDG00005002160	ENSMMDG00005002163	ENSMMDG00005002165	ENSMMDG00005002166
Percomorphaceae	ANCESTRAL SPECIES	106										ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00730000111141
Tiger tail seahorse	MODERN SPECIES	144								ENSHCOG00000018658	ENSHCOG00000018510	ENSHCOG00000018489	SLC19A2 (ENSHCOG00000018494) #26	ENSHCOG00000018470	atg3 (ENSHCOG00000018464)	ENSHCOG00000018413	ENSHCOG00000018400	atp1b1b (ENSHCOG00000018395) #22	CNGA3 (ENSHCOG00000018387)	UBE3A (ENSHCOG00000018345)	ddx4 (ENSHCOG00000018337)	ankrd10a (ENSHCOG00000018319)	ENSHCOG00000018269	cryaa (ENSHCOG00000018233)	DGKZ (ENSHCOG00000018221)	mdka (ENSHCOG00000018167)	CHRM4 (ENSHCOG00000018145)	ENSHCOG00000018124	RCAN1 (ENSHCOG00000018113)	ENSHCOG00000018079	ENSHCOG00000018059	ENSHCOG00000018051	ENSHCOG00000018047
Percomorphaceae_B	ANCESTRAL SPECIES	22	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT00940000169304	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT01030000234555.a.b.f.b
Percomorphaceae_C	ANCESTRAL SPECIES	23	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Eupercaria	ANCESTRAL SPECIES	23	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Tetraodontidae	ANCESTRAL SPECIES	22	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a.xb	ENSGT00940000156607.a.a.yb.b	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00390000008096.B.e.b	ENSGT00530000063480.a	ENSGT00940000164501.a.a.b.a	ENSGT00940000163494.a.b.a	ENSGT00940000164501.a.a.a.a.a	ENSGT00940000164501.a.a.a.b
Fugu	MODERN SPECIES	20	ENSTRUG00000026551	ENSTRUG00000027794	ENSTRUG00000027168	nlgn4xa (ENSTRUG00000002232)	pudp (ENSTRUG00000003358)	pnpla4 (ENSTRUG00000031102)	STS (ENSTRUG00000027761)	anos1a (ENSTRUG00000028299)	ENSTRUG00000031992	arhgap1 (ENSTRUG00000004482)	ENSTRUG00000032654	SLC19A2 (ENSTRUG00000030191) #26	atg3 (ENSTRUG00000028024)	ENSTRUG00000005537	ENSTRUG00000022801	atp1b1b (ENSTRUG00000027130) #22	CNGA3 (ENSTRUG00000006140)	UBE3A (ENSTRUG00000006347)	vasa (ENSTRUG00000030182)	ankrd10a (ENSTRUG00000020089)	ENSTRUG00000025902	cryaa (ENSTRUG00000002869)	DGKZ (ENSTRUG00000003102)	CHRM4 (ENSTRUG00000004253)	ENSTRUG00000019967	SATB2 (ENSTRUG00000032787)	ENSTRUG00000021705	ENSTRUG00000020190	ENSTRUG00000005499	ENSTRUG00000023210	ENSTRUG00000006250
Tetraodon	MODERN SPECIES	18	gyg2 (ENSTNIG00000014493)	MXRA5 (ENSTNIG00000014492)	PRKX (ENSTNIG00000014491)	ENSTNIG00000014489	pudp (ENSTNIG00000014488)	ENSTNIG00000014487	STS (ENSTNIG00000014486)	anos1a (ENSTNIG00000014485)	ENSTNIG00000014484	ENSTNIG00000014483	SLC19A2 (ENSTNIG00000014482) #26	atg3 (ENSTNIG00000014481)	ENSTNIG00000014480	ABHD8 (ENSTNIG00000014479)	ENSTNIG00000014478	atp1b1b (ENSTNIG00000014477) #22	CNGA3 (ENSTNIG00000014476)	UBE3A (ENSTNIG00000014475)	ddx4 (ENSTNIG00000014474)	ankrd10a (ENSTNIG00000014473)	ENSTNIG00000014472	cryaa (ENSTNIG00000014471)	DGKZ (ENSTNIG00000014470)	ENSTNIG00000014469	ENSTNIG00000014468	ENSTNIG00000014467	ENSTNIG00000014466	ENSTNIG00000014465	ENSTNIG00000014464	ENSTNIG00000000847	ENSTNIG00000000360
Eupecaria_A	ANCESTRAL SPECIES	23	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Ballan wrasse	MODERN SPECIES	746												DGKZ (ENSLBEG00000010866)	ENSLBEG00000010974	cryaa (ENSLBEG00000011037)	ankrd10a (ENSLBEG00000011157)	atp1b1b (ENSLBEG00000011257) #22
Eupecaria_B	ANCESTRAL SPECIES	23	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Perciformes	ANCESTRAL SPECIES	24	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00940000164013	ENSGT00940000159870	ENSGT00940000159602	ENSGT00940000159255	ENSGT00390000000447	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Perciformes_a	ANCESTRAL SPECIES	51										ENSGT00940000160630	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT01020000230582	ENSGT00440000033720.a.a.b	ENSGT00940000161153	ENSGT00940000165158.b
Pike perch	MODERN SPECIES	173										arhgap1 (ENSSLUG00000004984)	ENSSLUG00000004988	SLC19A2 (ENSSLUG00000004993) #26	atg3 (ENSSLUG00000005029)	ENSSLUG00000005134	ENSSLUG00000005259	atp1b1b (ENSSLUG00000005269) #22	CNGA3 (ENSSLUG00000005305)	UBE3A (ENSSLUG00000005444)	ddx4 (ENSSLUG00000005901)	ENSSLUG00000008061	ankrd10a (ENSSLUG00000008070)	ENSSLUG00000008081	cryaa (ENSSLUG00000008088)	DGKZ (ENSSLUG00000008198)	mdka (ENSSLUG00000010659)	CHRM4 (ENSSLUG00000010662)	ENSSLUG00000010665	ENSSLUG00000010672	ENSSLUG00000010680	ENSSLUG00000010683	ZBED1 (ENSSLUG00000010686)
Channel bull blenny	MODERN SPECIES	11				ENSCGOG00000000230	ENSCGOG00000000275	slx9 (ENSCGOG00000000344)	adarb1a (ENSCGOG00000000348)	ENSCGOG00000000371	runx1 (ENSCGOG00000000380)	arhgap1 (ENSCGOG00000000400)	ENSCGOG00000000408	SLC19A2 (ENSCGOG00000000406) #26	atg3 (ENSCGOG00000000416)	ENSCGOG00000000430	ENSCGOG00000000477	atp1b1b (ENSCGOG00000000490) #22	CNGA3 (ENSCGOG00000000502)	UBE3A (ENSCGOG00000000574)	ddx4 (ENSCGOG00000000854)	ankrd10a (ENSCGOG00000001229)	ENSCGOG00000001231	cryaa (ENSCGOG00000001233)	DGKZ (ENSCGOG00000001381)	mdka (ENSCGOG00000003349)	ENSCGOG00000002621	CHRM4 (ENSCGOG00000002650)	ENSCGOG00000002669	ENSCGOG00000002704	ENSCGOG00000002740	renbp (ENSCGOG00000002820)	renbp (ENSCGOG00000002995)
Cottioidei	ANCESTRAL SPECIES	71	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00940000164013	ENSGT00940000159870	ENSGT00940000159602	ENSGT00940000159255	ENSGT00390000000447	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Stickleback	MODERN SPECIES		adarb1a (ENSGACG00000015240)	slx9 (ENSGACG00000015252)	ENSGACG00000015253	ENSGACG00000015263	ENSGACG00000015268	ENSGACG00000015274	runx1 (ENSGACG00000015276)	DONSON (ENSGACG00000015279)	ENSGACG00000015284	ENSGACG00000015285	SLC19A2 (ENSGACG00000015286) #26	ENSGACG00000015287	atg3 (ENSGACG00000015289)	CARS2 (ENSGACG00000015295)	ENSGACG00000015303	atp1b1b (ENSGACG00000015312) #22	UBE3A (ENSGACG00000015321)	ddx4 (ENSGACG00000015323)	ENSGACG00000015328	ankrd10a (ENSGACG00000015330)	ENSGACG00000015333	cryaa (ENSGACG00000015336)	DGKZ (ENSGACG00000015339)	mdka (ENSGACG00000015348)	CHRM4 (ENSGACG00000015349)	ENSGACG00000015352	ENSGACG00000015353	ENSGACG00000015355	ENSGACG00000015357	ENSGACG00000015358	TAAR1 (ENSGACG00000015361)
Lumpfish	MODERN SPECIES	11				ENSCLMG00005008356	ENSCLMG00005008345	ENSCLMG00005008343	ENSCLMG00005008263	runx1 (ENSCLMG00005008089)	DONSON (ENSCLMG00005008086)	ENSCLMG00005008085	ENSCLMG00005008083	ENSCLMG00005008082	SLC19A2 (ENSCLMG00005008081) #26	atg3 (ENSCLMG00005008043)	ENSCLMG00005008033	atp1b1b (ENSCLMG00005008029) #22	CNGA3 (ENSCLMG00005008028)	UBE3A (ENSCLMG00005007685)	ENSCLMG00005007675	ENSCLMG00005007674	ENSCLMG00005007673	ENSCLMG00005007670	cryaa (ENSCLMG00005007669)	ENSCLMG00005007668	DGKZ (ENSCLMG00005006628)	CHRM4 (ENSCLMG00005006604)	ENSCLMG00005006601	ENSCLMG00005006598	ENSCLMG00005006597	slx9 (ENSCLMG00005006594)	ENSCLMG00005006591
Eupecaria_C	ANCESTRAL SPECIES	33	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Gilthead seabream	MODERN SPECIES	16	ENSSAUG00010024837	nlgn4xa (ENSSAUG00010024841)	pudp (ENSSAUG00010024845)	ENSSAUG00010024848	STS (ENSSAUG00010024846)	anos1a (ENSSAUG00010024849)	ENSSAUG00010024850	ENSSAUG00010024851	ENSSAUG00010024853	arhgap1 (ENSSAUG00010024856)	ENSSAUG00010024857	SLC19A2 (ENSSAUG00010024858) #26	atg3 (ENSSAUG00010002856)	ENSSAUG00010002964	DDRGK1 (ENSSAUG00010004899)	atp1b1b (ENSSAUG00010004916) #22	CNGA3 (ENSSAUG00010004923)	UBE3A (ENSSAUG00010004959)	ddx4 (ENSSAUG00010005870)	ankrd10a (ENSSAUG00010005925)	ENSSAUG00010005928	DGKZ (ENSSAUG00010005946)	cryaa (ENSSAUG00010006027)	CHRM4 (ENSSAUG00010006031)	ENSSAUG00010006036	ENSSAUG00010006048	ENSSAUG00010006056	ndufs1 (ENSSAUG00010006080)	ENSSAUG00010006418	creb3l1 (ENSSAUG00010006419)	atg13 (ENSSAUG00010006426)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	37	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	484	gprc6a (ENSLCRG00005014830)	kpna5 (ENSLCRG00005014722)	zufsp (ENSLCRG00005014717)	ENSLCRG00005014716	rwdd1 (ENSLCRG00005014715)	calhm5.1 (ENSLCRG00005014714)	calhm6 (ENSLCRG00005014713)	cnot10 (ENSLCRG00005014708)	TCAIM (ENSLCRG00005014700)	ENSLCRG00005014698	ENSLCRG00005014696	SLC19A2 (ENSLCRG00005014695) #26	atg3 (ENSLCRG00005014531)	ENSLCRG00005014522	ENSLCRG00005014515	atp1b1b (ENSLCRG00005014513) #22	ENSLCRG00005014509 #22	CNGA3 (ENSLCRG00005014496)	UBE3A (ENSLCRG00005014475)	ddx4 (ENSLCRG00005013232)	ankrd10a (ENSLCRG00005013213)	cryaa (ENSLCRG00005013212)	ENSLCRG00005013211	DGKZ (ENSLCRG00005011025)	mdka (ENSLCRG00005011005)	ENSLCRG00005011004	CHRM4 (ENSLCRG00005011002)	ENSLCRG00005010992	ENSLCRG00005010984	ENSLCRG00005010978	pomca (ENSLCRG00005010975)
Large yellow croaker	MODERN SPECIES	484	ENSLCRG00005010974	pomca (ENSLCRG00005010975)	ENSLCRG00005010978	ENSLCRG00005010984	ENSLCRG00005010992	CHRM4 (ENSLCRG00005011002)	ENSLCRG00005011004	mdka (ENSLCRG00005011005)	DGKZ (ENSLCRG00005011025)	ENSLCRG00005013211	cryaa (ENSLCRG00005013212)	ankrd10a (ENSLCRG00005013213)	ddx4 (ENSLCRG00005013232)	UBE3A (ENSLCRG00005014475)	CNGA3 (ENSLCRG00005014496)	ENSLCRG00005014509 #22	atp1b1b (ENSLCRG00005014513) #22	ENSLCRG00005014515	ENSLCRG00005014522	atg3 (ENSLCRG00005014531)	SLC19A2 (ENSLCRG00005014695) #26	ENSLCRG00005014696	ENSLCRG00005014698	TCAIM (ENSLCRG00005014700)	cnot10 (ENSLCRG00005014708)	calhm6 (ENSLCRG00005014713)	calhm5.1 (ENSLCRG00005014714)	rwdd1 (ENSLCRG00005014715)	ENSLCRG00005014716	zufsp (ENSLCRG00005014717)	kpna5 (ENSLCRG00005014722)
European seabass	MODERN SPECIES	15	nlgn4xa (ENSDLAG00005005684)	pudp (ENSDLAG00005005811)	ENSDLAG00005035097	ENSDLAG00005026482	ENSDLAG00005005863	ENSDLAG00005005876	anos1a (ENSDLAG00005006002)	ENSDLAG00005006075	ENSDLAG00005006101	ENSDLAG00005006110	ENSDLAG00005006187	ENSDLAG00005006200 #26	ENSDLAG00005029259	ENSDLAG00005006264	ENSDLAG00005030679	ENSDLAG00005006547 #22	ENSDLAG00005006567	ENSDLAG00005006603	ENSDLAG00005007298	ankrd10a (ENSDLAG00005007698)	ENSDLAG00005007705	cryaa (ENSDLAG00005007717)	DGKZ (ENSDLAG00005028495)	ENSDLAG00005007726	CHRM4 (ENSDLAG00005007732)	ENSDLAG00005007755	ENSDLAG00005007901
Percomorphaceae_D	ANCESTRAL SPECIES	23	ENSGT00390000016929	ENSGT00940000155466.e.a	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00920000150296	ENSGT01020000230582	ENSGT00440000033720.a.a.b
Anabantaria	ANCESTRAL SPECIES	23	ENSGT00390000016929	ENSGT00940000155466.e.a	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00440000033720.a.a.b	ENSGT00940000161153	ENSGT00940000165158.b	ENSGT00390000014753
Zig-zag eel	MODERN SPECIES	11	ENSMAMG00000004263	ENSMAMG00000004229	ENSMAMG00000004193	ENSMAMG00000004151	ENSMAMG00000004082	RUNX1 (ENSMAMG00000004023)	ENSMAMG00000027079	ENSMAMG00000003979	ENSMAMG00000003935	ENSMAMG00000027568	ENSMAMG00000003902	ENSMAMG00000003889 #26	ENSMAMG00000003872	ENSMAMG00000003825	ENSMAMG00000003850	ENSMAMG00000003801 #22	ENSMAMG00000003777	ENSMAMG00000003752	ENSMAMG00000003574	ankrd10a (ENSMAMG00000024434)	ENSMAMG00000003496	cryaa (ENSMAMG00000003398)	DGKZ (ENSMAMG00000003210)	ENSMAMG00000003164	CHRM4 (ENSMAMG00000003136)	ENSMAMG00000003097	ENSMAMG00000003082	ENSMAMG00000025062	ANOS1 (ENSMAMG00000025695)	STS (ENSMAMG00000003049)	ENSMAMG00000003024
Anabantoidei	ANCESTRAL SPECIES	23	ENSGT00390000016929	ENSGT00940000155466.e.a	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00440000033720.a.a.b	ENSGT00940000161153	ENSGT00940000165158.b	ENSGT00390000014753
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000000477	ENSBSLG00000000503	ENSBSLG00000000516	ENSBSLG00000000598	ENSBSLG00000000616	ENSBSLG00000000642	ENSBSLG00000000678	ENSBSLG00000000685	ENSBSLG00000000690	ENSBSLG00000004958	ENSBSLG00000005127	SLC19A2 (ENSBSLG00000005152) #26	atg3 (ENSBSLG00000005206)	ENSBSLG00000005466	ENSBSLG00000005693	atp1b1b (ENSBSLG00000005737) #22	CNGA3 (ENSBSLG00000005760)	UBE3A (ENSBSLG00000005791)	ddx4 (ENSBSLG00000006575)	ankrd10a (ENSBSLG00000007030)	ENSBSLG00000007039	cryaa (ENSBSLG00000007055)	DGKZ (ENSBSLG00000007145)	mdka (ENSBSLG00000007805)	CHRM4 (ENSBSLG00000007965)	ENSBSLG00000007981	ENSBSLG00000008007	anos1a (ENSBSLG00000008036)	STS (ENSBSLG00000008060)	ENSBSLG00000008139	pudp (ENSBSLG00000008201)
Climbing perch	MODERN SPECIES	11	ENSATEG00000010176	ENSATEG00000011004	ENSATEG00000011091	ENSATEG00000011112	ENSATEG00000011128	ENSATEG00000011270	ENSATEG00000011317	ENSATEG00000011339	ENSATEG00000011433	ENSATEG00000011449	ENSATEG00000011459	ENSATEG00000011463 #26	ENSATEG00000011476	ENSATEG00000011523	ENSATEG00000011534	ENSATEG00000011557 #22	ENSATEG00000011615	ENSATEG00000011668	ENSATEG00000011704	ankrd10a (ENSATEG00000011856)	ENSATEG00000011867	cryaa (ENSATEG00000011924)	DGKZ (ENSATEG00000012081)	ENSATEG00000012379	CHRM4 (ENSATEG00000012653)	ENSATEG00000012671	ENSATEG00000012732	anos1a (ENSATEG00000012748)	ENSATEG00000028001	ENSATEG00000012765	pudp (ENSATEG00000012775)
Carangaria	ANCESTRAL SPECIES	23	ENSGT01020000230582	ENSGT00920000150296	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT01030000234555.a.b.f.b
Pleuronectoidei	ANCESTRAL SPECIES	98										ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114
Turbot	MODERN SPECIES		gyg2 (ENSSMAG00000009257)	cd99 (ENSSMAG00000028075)	ZBED1 (ENSSMAG00000037113)	dhrsx (ENSSMAG00000009324)	ENSSMAG00000009359	cep70 (ENSSMAG00000009376)	adarb1a (ENSSMAG00000009423)	slx9 (ENSSMAG00000009443)	ENSSMAG00000009464	ENSSMAG00000009505	ENSSMAG00000009622	ENSSMAG00000009608 #26	ENSSMAG00000009630	ENSSMAG00000009661	ENSSMAG00000033842	ENSSMAG00000026899 #22	ENSSMAG00000009742	ENSSMAG00000009769	ENSSMAG00000009800	ankrd10a (ENSSMAG00000021928)	ENSSMAG00000009868	cryaa (ENSSMAG00000009877)	DGKZ (ENSSMAG00000009886)	ENSSMAG00000009956	CHRM4 (ENSSMAG00000009993)	ENSSMAG00000035075	ENSSMAG00000023269	ENSSMAG00000032254	map4k2 (ENSSMAG00000007591)	men1 (ENSSMAG00000007623)	ENSSMAG00000007653
Tongue sole	MODERN SPECIES	5	mettl21a (ENSCSEG00000005877)	CREB1 (ENSCSEG00000005881)	KLF7 (ENSCSEG00000005892)	RAMP1 (ENSCSEG00000005898)	erbb4a (ENSCSEG00000005905)	lancl1 (ENSCSEG00000005941)	mylz3 (ENSCSEG00000005948)	ENSCSEG00000005953	ENSCSEG00000005957	adarb1a (ENSCSEG00000005961)	ENSCSEG00000005963	SLC19A2 (ENSCSEG00000005967) #26	atg3 (ENSCSEG00000005972)	ENSCSEG00000005993	DDRGK1 (ENSCSEG00000006009)	atp1b1b (ENSCSEG00000006013) #22	UBE3A (ENSCSEG00000006017)	CNGA3 (ENSCSEG00000006024)	ddx4 (ENSCSEG00000006039)	ENSCSEG00000006167	ankrd10a (ENSCSEG00000006172)	ENSCSEG00000006174	gpd2 (ENSCSEG00000006181)	nr4a2b (ENSCSEG00000006209)	ENSCSEG00000006214	ENSCSEG00000006221	ENSCSEG00000006225	ENSCSEG00000006233	ENSCSEG00000006239	ENSCSEG00000006248	ENSCSEG00000006292
Carangaria_A	ANCESTRAL SPECIES	23	ENSGT01020000230582	ENSGT00920000150296	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308.d	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT01030000234555.a.b.f.b
Seriola	ANCESTRAL SPECIES	47	ENSGT01020000230582	ENSGT00920000150296	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000178385	ENSGT00940000160630	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308.d	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114
Yellowtail amberjack	MODERN SPECIES	3147	ENSSLDG00000014636	ENSSLDG00000014664	DONSON (ENSSLDG00000014741)	ENSSLDG00000014865	runx1 (ENSSLDG00000014875)	ENSSLDG00000014901	ENSSLDG00000014919	RCAN1 (ENSSLDG00000014941)	ENSSLDG00000014963	arhgap1 (ENSSLDG00000014978)	ENSSLDG00000015000	SLC19A2 (ENSSLDG00000015009) #26	atg3 (ENSSLDG00000015032)	ENSSLDG00000015088	ENSSLDG00000015129	atp1b1b (ENSSLDG00000015154) #22	CNGA3 (ENSSLDG00000015216)	UBE3A (ENSSLDG00000015239)	ddx4 (ENSSLDG00000015312)	ankrd10a (ENSSLDG00000015476)	ENSSLDG00000015518	cryaa (ENSSLDG00000015556)	ENSSLDG00000015584	mdka (ENSSLDG00000015648)	CHRM4 (ENSSLDG00000015668)	ENSSLDG00000015690	ENSSLDG00000015753	ENSSLDG00000015887
Greater amberjack	MODERN SPECIES	7	ENSSDUG00000020287	ENSSDUG00000020301	ENSSDUG00000020330	ENSSDUG00000020387	DONSON (ENSSDUG00000020494)	runx1 (ENSSDUG00000020634)	ENSSDUG00000021760	RCAN1 (ENSSDUG00000021893)	ENSSDUG00000021899	ENSSDUG00000021902	ENSSDUG00000021909	SLC19A2 (ENSSDUG00000021912) #26	atg3 (ENSSDUG00000021919)	ENSSDUG00000021941	ENSSDUG00000021977	atp1b1b (ENSSDUG00000021981) #22	CNGA3 (ENSSDUG00000021992)	UBE3A (ENSSDUG00000022003)	ddx4 (ENSSDUG00000022015)	ENSSDUG00000022034	ankrd10a (ENSSDUG00000022041)	ENSSDUG00000022047	cryaa (ENSSDUG00000022054)	DGKZ (ENSSDUG00000022061)	mdka (ENSSDUG00000022077)	CHRM4 (ENSSDUG00000022079)	ENSSDUG00000022092	ENSSDUG00000022105
Barramundi perch	MODERN SPECIES	465									ENSLCAG00010008669	ENSLCAG00010008663	ENSLCAG00010008659	ENSLCAG00010008656	SLC19A2 (ENSLCAG00010008651) #26	atg3 (ENSLCAG00010008555)	ENSLCAG00010008533	atp1b1b (ENSLCAG00010008504) #22	CNGA3 (ENSLCAG00010008502)	UBE3A (ENSLCAG00010008476)	ddx4 (ENSLCAG00010007444)	acp2 (ENSLCAG00010007211)	ankrd10a (ENSLCAG00010007205)	ENSLCAG00010007164	cryaa (ENSLCAG00010007150)	ENSLCAG00010006946
Ovalentaria	ANCESTRAL SPECIES	23	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT00940000169304	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C
Atherinomorphae	ANCESTRAL SPECIES	47	ENSGT00940000154344.b	ENSGT00940000161628	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00940000169304	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929
Oryzias	ANCESTRAL SPECIES	40	ENSGT00940000155466.e.a	ENSGT00940000164022	ENSGT00940000154344.b	ENSGT00940000161153	ENSGT00940000161628	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00940000164013	ENSGT00940000159870	ENSGT00940000159602
Oryzias_b	ANCESTRAL SPECIES	50											ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00940000164013	ENSGT00940000159870	ENSGT00940000159602
Indian medaka	MODERN SPECIES	743											CARS2 (ENSOMEG00000010290)	atg3 (ENSOMEG00000010344)	SLC19A2 (ENSOMEG00000010374) #26	ENSOMEG00000010387	ENSOMEG00000010410	atp1b1b (ENSOMEG00000010442) #22	CNGA3 (ENSOMEG00000010486)	UBE3A (ENSOMEG00000010563)	ddx4 (ENSOMEG00000010651)	ankrd10a (ENSOMEG00000010694)	ENSOMEG00000010748	cryaa (ENSOMEG00000010775)	CHRM4 (ENSOMEG00000010799)	ENSOMEG00000010811	cep70 (ENSOMEG00000010898)	adarb1a (ENSOMEG00000010969)	slx9 (ENSOMEG00000010999)	ENSOMEG00000011154	ENSOMEG00000011226	RCAN1 (ENSOMEG00000011264)	ENSOMEG00000011318
Javanese ricefish	MODERN SPECIES	11				dhrsx (ENSOJAG00000009717)	ENSOJAG00000009767	ENSOJAG00000009784	ENSOJAG00000016676	dhrsx (ENSOJAG00000016890)	ENSOJAG00000016893	ENSOJAG00000016926	ENSOJAG00000016957	ENSOJAG00000016984	atg3 (ENSOJAG00000017399)	SLC19A2 (ENSOJAG00000017493) #26	ENSOJAG00000017501	atp1b1b (ENSOJAG00000017578) #22	CNGA3 (ENSOJAG00000017585)	UBE3A (ENSOJAG00000017694)	ankrd10a (ENSOJAG00000018363)	ENSOJAG00000018379	cryaa (ENSOJAG00000018404)	CHRM4 (ENSOJAG00000018412)	ENSOJAG00000018423	ENSOJAG00000018447	adarb1a (ENSOJAG00000018589)	slx9 (ENSOJAG00000018700)	PLCD4 (ENSOJAG00000018752)	ENSOJAG00000019475	RCAN1 (ENSOJAG00000019486)	ENSOJAG00000019501	ENSOJAG00000019517
Oryzias_a	ANCESTRAL SPECIES	56			ENSGT00940000154342.C	ENSGT00940000155466.e.a	ENSGT00940000164022	ENSGT00940000154344.b	ENSGT00940000161153	ENSGT00940000161628	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00390000009029	ENSGT00940000155992.c.b	ENSGT00390000015709	ENSGT00940000156180.e	ENSGT00940000164013	ENSGT00940000159870	ENSGT00940000159602
Japanese Medaka HdrR	MODERN SPECIES	11	ENSORLG00000001099	ENSORLG00000030043	ENSORLG00000027896	ENSORLG00000029114	ENSORLG00000028030	ENSORLG00000024646	ENSORLG00000024819	ENSORLG00000022134	ENSORLG00000025122	ENSORLG00000029327	CARS2 (ENSORLG00000019327)	atg3 (ENSORLG00000019346)	SLC19A2 (ENSORLG00000027666) #26	ENSORLG00000019352	ENSORLG00000019363	atp1b1b (ENSORLG00000026544) #22	ENSORLG00000020665	UBE3A (ENSORLG00000020667)	ddx4 (ENSORLG00000020672)	ankrd10a (ENSORLG00000020675)	ENSORLG00000020677	cryaa (ENSORLG00000020678)	ENSORLG00000020679	ENSORLG00000027334	ENSORLG00000028757	cep70 (ENSORLG00000025033)	adarb1a (ENSORLG00000020682)	slx9 (ENSORLG00000027350)	ENSORLG00000020685	ENSORLG00000020687	ENSORLG00000028169
Chinese medaka	MODERN SPECIES	91											CARS2 (ENSOSIG00000006101)	atg3 (ENSOSIG00000006104)	SLC19A2 (ENSOSIG00000006113) #26	ENSOSIG00000006115	ENSOSIG00000006116	atp1b1b (ENSOSIG00000006117) #22	UBE3A (ENSOSIG00000006126)	ankrd10a (ENSOSIG00000007797)	ENSOSIG00000007799	cryaa (ENSOSIG00000007801)
Cyprinodontiformes	ANCESTRAL SPECIES	67								ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929
Aplocheiloidei	ANCESTRAL SPECIES	156									ENSGT01020000230582	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929
Turquoise killifish	MODERN SPECIES	1619	gbx2 (ENSNFUG00015011603)	ENSNFUG00015011592	pomca (ENSNFUG00015011582)	MLPH (ENSNFUG00015011558)	SNX9 (ENSNFUG00015011387)	BX957297.2 (ENSNFUG00015011364)	ENSNFUG00015011343	EEF1B2 (ENSNFUG00015011306)	arl11 (ENSNFUG00015011283)	ebpl (ENSNFUG00015011262)	ENSNFUG00015011253	SLC19A2 (ENSNFUG00015011244) #26	ENSNFUG00015011234	ENSNFUG00015011228	ENSNFUG00015011220	ATP1B1B (ENSNFUG00015011206) #22	CNGA3 (ENSNFUG00015011195)	UBE3A (ENSNFUG00015011165)	ENSNFUG00015011142	ENSNFUG00015011133	ENSNFUG00015011114	ankrd10a (ENSNFUG00015011073)	ENSNFUG00015011055	cryaa (ENSNFUG00015011042)	CHRM4A (ENSNFUG00015011027)	ENSNFUG00015011011	GTF3C3 (ENSNFUG00015010693)	ENSNFUG00015010684	CARS2 (ENSNFUG00015010636)	APG3L (ENSNFUG00015010599)	ENSNFUG00015010583
Mangrove rivulus	MODERN SPECIES	91	net1 (ENSKMAG00000011851)	ENSKMAG00000011887	ENSKMAG00000011902	gtf3c3 (ENSKMAG00000011925)	HECW2 (ENSKMAG00000011951)	ENSKMAG00000012003	ENSKMAG00000012038	ENSKMAG00000012076	cryaa (ENSKMAG00000012128)	ankrd10a (ENSKMAG00000012158)	CARS2 (ENSKMAG00000012180)	atg3 (ENSKMAG00000012205)	SLC19A2 (ENSKMAG00000012238) #26	ENSKMAG00000012282	ENSKMAG00000012300	atp1b1b (ENSKMAG00000012367) #22	CNGA3 (ENSKMAG00000012382)	UBE3A (ENSKMAG00000012397)	ddx4 (ENSKMAG00000012439)	ENSKMAG00000012531	ENSKMAG00000012551	STS (ENSKMAG00000012564)	cd99 (ENSKMAG00000012598)	gyg2 (ENSKMAG00000012637)	MXRA5 (ENSKMAG00000012659)	PRKX (ENSKMAG00000012679)	nlgn4xa (ENSKMAG00000012701)	OLFM1 (ENSKMAG00000012742)	ENSKMAG00000012770	fnbp1a (ENSKMAG00000012787)	med27 (ENSKMAG00000012833)
Cyprinodontoidei	ANCESTRAL SPECIES	62								ENSGT00440000033720.a.a.b	ENSGT01020000230582.b	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000161153	ENSGT00940000165158.b	ENSGT00390000014753	ENSGT00940000156607.a.a	ENSGT00940000159832	ENSGT00940000159942.a.c.a	ENSGT00940000161628
Poeciliinae	ANCESTRAL SPECIES	42					ENSGT00940000164897.a.b	ENSGT00940000156780	ENSGT01020000230582.a	ENSGT00440000033720.a.a.b	ENSGT01020000230582.b	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000161153	ENSGT00940000165158.b	ENSGT00390000014753	ENSGT00940000156607.a.a	ENSGT00940000159832	ENSGT00940000159942.a.c.a	ENSGT00940000161628
Poecilia	ANCESTRAL SPECIES	67						ENSGT00940000164897.a.b	ENSGT00940000156780	ENSGT01020000230582.a	ENSGT01020000230582.b	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000161153	ENSGT00940000165158.b	ENSGT00390000014753	ENSGT00940000156607.a.a	ENSGT00940000159832	ENSGT00940000159942.a.c.a	ENSGT00940000161628
NAME_6	ANCESTRAL SPECIES	309						ENSGT00940000164897.a.b	ENSGT00940000156780	ENSGT01020000230582.a	ENSGT01020000230582.b	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000165508	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b
Sailfin molly	MODERN SPECIES	1891													SLC19A2 (ENSPLAG00000020612) #26	ENSPLAG00000020626	ENSPLAG00000020637	atp1b1b (ENSPLAG00000020645) #22	CNGA3 (ENSPLAG00000020661)	UBE3A (ENSPLAG00000020695)	ddx4 (ENSPLAG00000020726)	ENSPLAG00000020742	ENSPLAG00000020756
Amazon molly	MODERN SPECIES	899							ENSPFOG00000018971	ENSPFOG00000020558	ENSPFOG00000018967	DDRGK1 (ENSPFOG00000018962)	ENSPFOG00000018951	atg3 (ENSPFOG00000018939)	SLC19A2 (ENSPFOG00000018920) #26	ENSPFOG00000022122	ENSPFOG00000018903	atp1b1b (ENSPFOG00000018892) #22	CNGA3 (ENSPFOG00000018885)	UBE3A (ENSPFOG00000018875)	ddx4 (ENSPFOG00000018842)	ENSPFOG00000018834
Guppy	MODERN SPECIES	450	ENSPREG00000017206	CTDSP1 (ENSPREG00000017262)	obsl1a (ENSPREG00000017290)	ENSPREG00000017415	ENSPREG00000017463	ATP1A1 (ENSPREG00000017481)	ENSPREG00000017519	ENSPREG00000017586	ENSPREG00000017596	ENSPREG00000017610	ENSPREG00000017622	atg3 (ENSPREG00000017638)	SLC19A2 (ENSPREG00000017667) #26	ENSPREG00000017679	ENSPREG00000017697	atp1b1b (ENSPREG00000017732) #22	CNGA3 (ENSPREG00000017756)	UBE3A (ENSPREG00000017799)	ddx4 (ENSPREG00000017840)	ENSPREG00000017872	ENSPREG00000017886	cryaa (ENSPREG00000017897)	ENSPREG00000017946	CHRM4 (ENSPREG00000017969)	ENSPREG00000017979	STS (ENSPREG00000018006)	ENSPREG00000018013	pudp (ENSPREG00000018021)	nlgn4xa (ENSPREG00000018050)	PRKX (ENSPREG00000018074)	MXRA5 (ENSPREG00000018101)
Platyfish	MODERN SPECIES	16	ENSXMAG00000009878	ENSXMAG00000029739	ENSXMAG00000009853	ENSXMAG00000009852	ENSXMAG00000026199	ENSXMAG00000020169	ENSXMAG00000009847	ENSXMAG00000025376	ENSXMAG00000023949	ENSXMAG00000022662	ENSXMAG00000009824	atg3 (ENSXMAG00000009806)	SLC19A2 (ENSXMAG00000009795) #26	ENSXMAG00000028105	ENSXMAG00000009779	atp1b1b (ENSXMAG00000027546) #22	CNGA3 (ENSXMAG00000009749)	UBE3A (ENSXMAG00000009731)	ddx4 (ENSXMAG00000009677)	ankrd10a (ENSXMAG00000009672)	ENSXMAG00000029937	cryaa (ENSXMAG00000026790)	ENSXMAG00000028695	ENSXMAG00000009655	ENSXMAG00000025239	ENSXMAG00000027811	GPR180 (ENSXMAG00000025201)	TGDS (ENSXMAG00000002759)	ENSXMAG00000002739	SLC5A3 (ENSXMAG00000002730)	ENSXMAG00000004148
NAME_4	ANCESTRAL SPECIES	202			ENSGT00390000005596.a	ENSGT00940000153695.B	ENSGT01000000214434.B.a.b	ENSGT00390000013956	ENSGT00940000156877	ENSGT00940000175375	ENSGT00940000159144.A.f	ENSGT00390000017193	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000009987	ENSGT00940000160630	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929
Sheepshead minnow	MODERN SPECIES	1225																atp1b1b (ENSCVAG00000021778) #22	CNGA3 (ENSCVAG00000021748)	UBE3A (ENSCVAG00000021708)	ENSCVAG00000021672	ENSCVAG00000021667	ENSCVAG00000021654
Mummichog	MODERN SPECIES	778				ENSFHEG00000013354	ENSFHEG00000013359	ENSFHEG00000013402	ENSFHEG00000013418	ENSFHEG00000013428	ENSFHEG00000013437	ENSFHEG00000013446	CARS2 (ENSFHEG00000013459)	atg3 (ENSFHEG00000013467)	SLC19A2 (ENSFHEG00000013647) #26	ENSFHEG00000013657	arhgap1 (ENSFHEG00000013674)	atp1b1b (ENSFHEG00000013703) #22
Ovalentaria_B	ANCESTRAL SPECIES	22	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT00940000169304	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C
Pomacentridae	ANCESTRAL SPECIES	159										ENSGT00940000165508	ENSGT00390000009987	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Pomacentridae_A	ANCESTRAL SPECIES	174										ENSGT00940000165508	ENSGT00390000009987	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Amphiprion	ANCESTRAL SPECIES	126	ENSGT00390000006826	ENSGT00940000165235.a.a	ENSGT00390000004923.C	ENSGT00940000162768.B.b	ENSGT00940000154360.A.b.b	ENSGT00940000155749.d	ENSGT00510000047334	ENSGT00550000074981	ENSGT00950000183140.a.a	ENSGT00940000165508	ENSGT00390000009987	ENSGT00390000006347.b	ENSGT00390000010308	ENSGT00950000183022.a.b #26	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00530000068760	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00390000007640.b.a	ENSGT00940000160394.a	ENSGT00940000162114	ENSGT00730000111141
Clown anemonefish	MODERN SPECIES	810						ATP7B (ENSAOCG00000001045)	eed (ENSAOCG00000014876)	pwp2h (ENSAOCG00000014853)	ENSAOCG00000014780	ENSAOCG00000014763	ENSAOCG00000014713	ENSAOCG00000014696	atg3 (ENSAOCG00000014661)	SLC19A2 (ENSAOCG00000014642) #26	DDRGK1 (ENSAOCG00000014632)	atp1b1b (ENSAOCG00000014615) #22	CNGA3 (ENSAOCG00000014603)	UBE3A (ENSAOCG00000000965)
Orange clownfish	MODERN SPECIES	16	ENSAPEG00000007932	ENSAPEG00000007959	ENSAPEG00000007995	ENSAPEG00000008011	LRRC3 (ENSAPEG00000008027)	ATP7B (ENSAPEG00000008040)	eed (ENSAPEG00000008130)	pwp2h (ENSAPEG00000008152)	ENSAPEG00000008229	ENSAPEG00000008265	ENSAPEG00000008318	ENSAPEG00000008343	atg3 (ENSAPEG00000008361)	SLC19A2 (ENSAPEG00000008374) #26	DDRGK1 (ENSAPEG00000008381)	atp1b1b (ENSAPEG00000008396) #22	CNGA3 (ENSAPEG00000008425)	UBE3A (ENSAPEG00000008455)	ddx4 (ENSAPEG00000008490)	ENSAPEG00000008675	ankrd10a (ENSAPEG00000008689)	ENSAPEG00000008701	cryaa (ENSAPEG00000008742)	DGKZ (ENSAPEG00000008756)	mdka (ENSAPEG00000008827)	CHRM4 (ENSAPEG00000008958)	ENSAPEG00000009064	ENSAPEG00000009136	gca (ENSAPEG00000009189)	dpp4 (ENSAPEG00000009208)	gcga (ENSAPEG00000009262)
Spiny chromis	MODERN SPECIES	1243								ENSAPOG00000020859	ENSAPOG00000020878	ENSAPOG00000020920	ENSAPOG00000020945	ENSAPOG00000021034	atg3 (ENSAPOG00000021088)	SLC19A2 (ENSAPOG00000021104) #26	DDRGK1 (ENSAPOG00000021115)	atp1b1b (ENSAPOG00000021147) #22	CNGA3 (ENSAPOG00000021215)	UBE3A (ENSAPOG00000021260)	ddx4 (ENSAPOG00000021394)	ENSAPOG00000021434	pwp2h (ENSAPOG00000021522)	eed (ENSAPOG00000021554)	ATP7B (ENSAPOG00000021619)
Bicolor damselfish	MODERN SPECIES	406										ENSSPAG00000014036	ENSSPAG00000014115	ENSSPAG00000014061	atg3 (ENSSPAG00000014130)	SLC19A2 (ENSSPAG00000014161) #26	ENSSPAG00000014181	atp1b1b (ENSSPAG00000014210) #22	CNGA3 (ENSSPAG00000014227)	UBE3A (ENSSPAG00000014281)	ddx4 (ENSSPAG00000014307)	ankrd10a (ENSSPAG00000014397)	ENSSPAG00000014413	cryaa (ENSSPAG00000014441)	DGKZ (ENSSPAG00000014452)	mdka (ENSSPAG00000014513)	CHRM4 (ENSSPAG00000014525)	ENSSPAG00000014546	ENSSPAG00000014575	dgke (ENSSPAG00000014613)	ENSSPAG00000014637	trim25 (ENSSPAG00000014642)	ENSSPAG00000014666
Cichlidae	ANCESTRAL SPECIES	51	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT00940000169304	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	39	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582.e	ENSGT00920000150296	ENSGT00940000165508	ENSGT00390000009987	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT00940000169304	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b
Nile tilapia	MODERN SPECIES	14	pudp (ENSONIG00000003695)	ENSONIG00000027165	ENSONIG00000037745	ENSONIG00000036860	ENSONIG00000003696	ENSONIG00000003700	ENSONIG00000038767	anos1a (ENSONIG00000003710)	ENSONIG00000040391	ENSONIG00000003716	ENSONIG00000035581	ENSONIG00000003721 #26	atg3 (ENSONIG00000003724)	ENSONIG00000003730	DDRGK1 (ENSONIG00000003737)	atp1b1b (ENSONIG00000032786) #22	CNGA3 (ENSONIG00000003742)	UBE3A (ENSONIG00000003746)	ddx4 (ENSONIG00000042460)	ankrd10a (ENSONIG00000003753)	ENSONIG00000003755	cryaa (ENSONIG00000003758)	DGKZ (ENSONIG00000003759)	ENSONIG00000028902	ENSONIG00000003771	ENSONIG00000021315	ENSONIG00000003775	HECW2 (ENSONIG00000003777)	ENSONIG00000037365	gtf3c3 (ENSONIG00000003781)	dmd (ENSONIG00000003787)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	51	ENSGT00390000014753	ENSGT00940000165158.b	ENSGT00940000162022	ENSGT00940000161153	ENSGT00440000033720.a.a.b	ENSGT01020000230582.f	ENSGT01020000230582.e	ENSGT00920000150296.a.a	ENSGT00940000165508	ENSGT00390000009987.g	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT00940000169304	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b
Haplochromini	ANCESTRAL SPECIES	62	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000162022	ENSGT00940000161153.i	ENSGT00440000033720.a.a.b	ENSGT01020000230582.e	ENSGT00920000150296.a.a	ENSGT00940000165508	ENSGT00390000009987.g	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a	ENSGT00730000111141	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b.c
Burton s mouthbrooder	MODERN SPECIES	523									anos1a (ENSHBUG00000001761)	arhgap1 (ENSHBUG00000001779)	ENSHBUG00000001787	SLC19A2 (ENSHBUG00000001800) #26	atg3 (ENSHBUG00000001814)	ENSHBUG00000001824	ENSHBUG00000001836	atp1b1b (ENSHBUG00000001844) #22	CNGA3 (ENSHBUG00000001860)	UBE3A (ENSHBUG00000001874)	ddx4 (ENSHBUG00000001897)	ankrd10a (ENSHBUG00000001911)	ENSHBUG00000001917	DGKZ (ENSHBUG00000001926)	ENSHBUG00000001937	ENSHBUG00000001964	ENSHBUG00000001984	gtf3c3 (ENSHBUG00000001999)	dmd (ENSHBUG00000002127)	ENSHBUG00000002192
Haplochromini_A	ANCESTRAL SPECIES	63	ENSGT00940000159942.a.c.a	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000162022	ENSGT00940000161153.i	ENSGT00440000033720.a.a.b	ENSGT01020000230582.e	ENSGT00920000150296.a.a	ENSGT00940000165508	ENSGT00390000009987.g	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a	ENSGT00730000111141.db.a	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C	ENSGT00940000165756.B.h	ENSGT00530000063484.b.b.d.b.c	ENSGT00940000178734
P. nyererei	MODERN SPECIES	507								anos1a (ENSPNYG00000022034)	ENSPNYG00000022049	ENSPNYG00000022059	ENSPNYG00000022068	SLC19A2 (ENSPNYG00000022080) #26	atg3 (ENSPNYG00000022098)	ENSPNYG00000022118	DDRGK1 (ENSPNYG00000022139)	atp1b1b (ENSPNYG00000022156) #22	CNGA3 (ENSPNYG00000022183)	UBE3A (ENSPNYG00000022188)	ddx4 (ENSPNYG00000022212)	ankrd10a (ENSPNYG00000022229)	ENSPNYG00000022241	cryaa (ENSPNYG00000022260)	DGKZ (ENSPNYG00000022309)	ENSPNYG00000022366	ENSPNYG00000022376	HECW2 (ENSPNYG00000022395)	ENSPNYG00000022419	gtf3c3 (ENSPNYG00000022430)	dmd (ENSPNYG00000022641)	ENSPNYG00000022924	ENSPNYG00000022939
Haplochromini_B	ANCESTRAL SPECIES	71	ENSGT00940000159832	ENSGT00940000156607.a.a	ENSGT00390000014753	ENSGT00940000162022	ENSGT00940000161153.i	ENSGT00440000033720.a.a.b	ENSGT01020000230582.f	ENSGT01020000230582.e	ENSGT00920000150296.a.a	ENSGT00940000165508	ENSGT00390000009987.g	ENSGT00950000183022.a.b #26	ENSGT00390000010308	ENSGT00390000006347.b	ENSGT00390000017193	ENSGT01030000234579.C.n #22	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT00940000157507	ENSGT00940000156564.b	ENSGT00390000008490	ENSGT00940000160159	ENSGT00940000156152.e.b	ENSGT00940000160394.a.g	ENSGT00940000170955.d.a	ENSGT00730000111141.eb	ENSGT00940000155466.e.a	ENSGT00390000016929	ENSGT00940000154342.C	ENSGT00940000165756.B.h	ENSGT00530000063484.b.b.d.b.c
Eastern happy	MODERN SPECIES	14	pudp (ENSACLG00000008242)	ENSACLG00000008229	ENSACLG00000008222	ENSACLG00000008218	anos1a (ENSACLG00000008217)	ENSACLG00000008211	ENSACLG00000008203	ENSACLG00000008194	ENSACLG00000008187	ENSACLG00000008158	ENSACLG00000008143	SLC19A2 (ENSACLG00000007994) #26	atg3 (ENSACLG00000007586)	ENSACLG00000007545	DDRGK1 (ENSACLG00000007529)	atp1b1b (ENSACLG00000007517) #22	CNGA3 (ENSACLG00000007510)	UBE3A (ENSACLG00000007490)	ddx4 (ENSACLG00000007422)	ENSACLG00000007417	ankrd10a (ENSACLG00000007413)	cryaa (ENSACLG00000007367)	ENSACLG00000007352	DGKZ (ENSACLG00000007274)	ENSACLG00000007130	ENSACLG00000007123	ENSACLG00000007098	ENSACLG00000007065	HECW2 (ENSACLG00000006965)	gtf3c3 (ENSACLG00000006496)	dmd (ENSACLG00000006126)
Zebra mbuna	MODERN SPECIES	1105	ENSMZEG00005019290	nlgn4xa (ENSMZEG00005019277)	pudp (ENSMZEG00005019264)	pnpla4 (ENSMZEG00005019256)	ENSMZEG00005019250	anos1a (ENSMZEG00005019232)	ENSMZEG00005019225	ENSMZEG00005019221	ENSMZEG00005019200	ENSMZEG00005019195	ENSMZEG00005019191	SLC19A2 (ENSMZEG00005019184) #26	atg3 (ENSMZEG00005019179)	ENSMZEG00005019169	DDRGK1 (ENSMZEG00005019156)	atp1b1b (ENSMZEG00005019152) #22	CNGA3 (ENSMZEG00005019147)	UBE3A (ENSMZEG00005019141)	ddx4 (ENSMZEG00005019116)	ankrd10a (ENSMZEG00005019108)	ENSMZEG00005019095	cryaa (ENSMZEG00005019090)	ENSMZEG00005019049	ENSMZEG00005019014	ENSMZEG00005019011	ENSMZEG00005018999	HECW2 (ENSMZEG00005018985)	gtf3c3 (ENSMZEG00005018974)	dmd (ENSMZEG00005017653)	ENSMZEG00005017586	ENSMZEG00005017581
Lyretail cichlid	MODERN SPECIES	384	ENSNBRG00000013668	nlgn4xa (ENSNBRG00000013733)	pudp (ENSNBRG00000013762)	pnpla4 (ENSNBRG00000013783)	STS (ENSNBRG00000013801)	anos1a (ENSNBRG00000013842)	ENSNBRG00000013913	ENSNBRG00000013927	ENSNBRG00000013961	ENSNBRG00000013977	SLC19A2 (ENSNBRG00000013987) #26	atg3 (ENSNBRG00000014016)	CARS2 (ENSNBRG00000014118)	ENSNBRG00000014169	ENSNBRG00000014181	atp1b1b (ENSNBRG00000014206) #22	CNGA3 (ENSNBRG00000014284)	UBE3A (ENSNBRG00000014367)	ddx4 (ENSNBRG00000014442)	ankrd10a (ENSNBRG00000014781)	ENSNBRG00000014851	cryaa (ENSNBRG00000014875)	ENSNBRG00000014893	DGKZ (ENSNBRG00000014924)	ENSNBRG00000015044	ENSNBRG00000015073	HECW2 (ENSNBRG00000015082)	ENSNBRG00000015128	gtf3c3 (ENSNBRG00000015155)	dmd (ENSNBRG00000015200)	ENSNBRG00000015322
Midas cichlid	MODERN SPECIES	556																atp1b1b (ENSACIG00000017185) #22	CNGA3 (ENSACIG00000017593)	UBE3A (ENSACIG00000017602)	ddx4 (ENSACIG00000017623)	ankrd10a (ENSACIG00000017702)	ENSACIG00000017715	cryaa (ENSACIG00000017726)	ENSACIG00000017779	DGKZ (ENSACIG00000017798)	CHRM4 (ENSACIG00000017856)	ENSACIG00000017866	ENSACIG00000017870
Cod	MODERN SPECIES	20	ENSGMOG00000032604	PRKX (ENSGMOG00000003669)	ENSGMOG00000024168	nlgn4xa (ENSGMOG00000007687)	ENSGMOG00000029703	pudp (ENSGMOG00000011328)	ENSGMOG00000017514	ENSGMOG00000017494	ENSGMOG00000026743	ENSGMOG00000027432	ENSGMOG00000024581	ENSGMOG00000018780	ENSGMOG00000018766 #26	ENSGMOG00000018726 #13	mpc2a (ENSGMOG00000030387) #12	ENSGMOG00000007206 #22	ENSGMOG00000025130	ENSGMOG00000022325	ENSGMOG00000030541	ENSGMOG00000027949	ENSGMOG00000003146	ENSGMOG00000018946	ENSGMOG00000018993	ENSGMOG00000030009	ENSGMOG00000000146	ENSGMOG00000033235	ENSGMOG00000034066	ENSGMOG00000002928	ENSGMOG00000002942	ENSGMOG00000025826	adarb1a (ENSGMOG00000002964)
Protacanthopterygii	ANCESTRAL SPECIES	66	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000153118	ENSGT00940000158209	ENSGT00940000154474.A	ENSGT00940000154474.B.a	ENSGT00940000154474.B.b	ENSGT00940000157694	ENSGT00940000154505.A.c	ENSGT00390000001101	ENSGT00940000158737.h	ENSGT00940000155050.b	ENSGT01030000234579.C #22	ENSGT00940000166950	ENSGT00940000155502	ENSGT00390000003338	ENSGT00940000161508.b	ENSGT00940000155126.s.a	ENSGT00390000004553.f	ENSGT00940000160059.a.b.a	ENSGT00550000075037	ENSGT00950000183165.a.a.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b	ENSGT01000000221844	ENSGT00550000074981	ENSGT01000000214434.B.a.b	ENSGT00990000204351
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	7	im:7152348 (ENSELUG00000007267)	cep63 (ENSELUG00000007285)	amotl2a (ENSELUG00000007310)	ENSELUG00000007332	sap130a (ENSELUG00000007391)	MYO7B (ENSELUG00000007930)	GPR17 (ENSELUG00000008154)	INPP5D (ENSELUG00000008208)	si:ch73-14h10.2 (ENSELUG00000008241)	bcl6aa (ENSELUG00000008285)	ENSELUG00000033731	lpp (ENSELUG00000008358)	tp63 (ENSELUG00000008470)	zbtb11 (ENSELUG00000008519)	dpt (ENSELUG00000008580) #21	ATP1B1 (ENSELUG00000008597) #22	nme7 (ENSELUG00000008663) #23	zgc:172121 (ENSELUG00000008699)	BIVM (ENSELUG00000008715)	si:ch211-201h21.5 (ENSELUG00000008734)	TMEM131 (ENSELUG00000009013)	CNGA3 (ENSELUG00000009152)	CNGA3 (ENSELUG00000030819)	ube3a (ENSELUG00000009232)	ATP10A (ENSELUG00000009308)	GABRB3 (ENSELUG00000009339)	GABRA5 (ENSELUG00000009373)	GABRG3 (ENSELUG00000009399)	OCA2 (ENSELUG00000009431)	HERC2 (ENSELUG00000009492)	nipa1 (ENSELUG00000029920)
Northern pike	MODERN SPECIES	21	cybb (ENSELUG00000024032)	ENSELUG00000027320	ENSELUG00000024103	dusp27 (ENSELUG00000024114)	ENSELUG00000024126	CD247 (ENSELUG00000024134)	creg1 (ENSELUG00000024230) #7	ENSELUG00000024162	ENSELUG00000024242	f7l (ENSELUG00000028406)	f7 (ENSELUG00000024395)	f7i (ENSELUG00000024411)	f10 (ENSELUG00000024556)	prozb (ENSELUG00000029883)	pcid2 (ENSELUG00000001821)	atp1b1b (ENSELUG00000001828) #22	TMEM131 (ENSELUG00000001834)	CNGA3 (ENSELUG00000001838)	UBE3A (ENSELUG00000001840)	ENSELUG00000001842	kpnb3 (ENSELUG00000001242)	nudt15 (ENSELUG00000001847)	cpo (ENSELUG00000000051)	cpo (ENSELUG00000001515)	cpo (ENSELUG00000000052)	fn1b (ENSELUG00000001859)	atic (ENSELUG00000001864)	mnx2b (ENSELUG00000001866)	stk16 (ENSELUG00000001868)	tuba8l2 (ENSELUG00000001871)	NR4A2 (ENSELUG00000001873)
Salmoninae	ANCESTRAL SPECIES	57	ENSGT00940000159616.fc.a	ENSGT00940000155009.a.b.a.b	ENSGT00940000166110	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000157831.j.b	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000158209	ENSGT00940000154474.A	ENSGT00940000154474.B.a.g	ENSGT00940000154474.B.b	ENSGT00940000157694.u.a	ENSGT00940000154505.A.c	ENSGT00390000001101.c.b.a	ENSGT01030000234579.C #22	ENSGT00940000166950	ENSGT00940000155502	ENSGT00390000003338.y	ENSGT00940000161508.b.o.b.a	ENSGT00390000003338.z	ENSGT00940000161508.b.o.a	ENSGT00940000155126.s.a.k.b	ENSGT00390000004553.f.b.a.a	ENSGT00940000160059.a.b.a	ENSGT00550000075037.b	ENSGT00950000183165.a.a.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b.b.a.a	ENSGT01000000221844	ENSGT00550000074981
Huchen	DUPLICATION
Huchen	DUPLICATION
Huchen	MODERN SPECIES	4365																ATP1B1 (ENSHHUG00000038938) #22
Huchen	MODERN SPECIES	5989																ATP1B1 (ENSHHUG00000006900) #22
Huchen	DUPLICATION
Huchen	MODERN SPECIES	2184					ENSHHUG00000019176	dusp27 (ENSHHUG00000019168)	ENSHHUG00000019166	ENSHHUG00000019140	creg1 (ENSHHUG00000019135) #7	ENSHHUG00000019116	f7l (ENSHHUG00000019113)	f7 (ENSHHUG00000019101)	f7i (ENSHHUG00000019092)	prozb (ENSHHUG00000019070)	pcid2 (ENSHHUG00000019057)	atp1b1b (ENSHHUG00000019049) #22
Huchen	MODERN SPECIES	4032																ATP1B1 (ENSHHUG00000003124) #22	TMEM131 (ENSHHUG00000003144)
Salmoninae_a	ANCESTRAL SPECIES	59	ENSGT00940000159616.fc.b.b	ENSGT00940000155009.a.b.a.a	ENSGT00940000166110	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000157831.j.b	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000158209	ENSGT00940000154474.A	ENSGT00940000154474.B.a.g	ENSGT00940000154474.B.b	ENSGT00940000157694.u.a	ENSGT00940000154505.A.c	ENSGT00390000001101.c.b.a	ENSGT01030000234579.C #22	ENSGT00960000192080	ENSGT00940000155502	ENSGT00390000003338.y	ENSGT00940000161508.b.o.b.a	ENSGT00390000003338.z	ENSGT00940000161508.b.o.a	ENSGT00940000155126.s.a.k.b	ENSGT00390000004553.f.b.a.a	ENSGT00940000160059.a.b.a	ENSGT00550000075037.b	ENSGT00950000183165.a.a.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b.b.a.a	ENSGT01000000221844	ENSGT00390000001718.b.b.a.b
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT01030000234579.C.s #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT01030000234579.C.s #22
Chinook salmon	MODERN SPECIES	462													isl1a (ENSOTSG00005041829)	ENSOTSG00005041831	ENSOTSG00005041832	ENSOTSG00005041833 #22
Oncorhynchus	DUPLICATION
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000158597	ENSGT00940000164964.a.b	ENSGT00940000160730.c.a	ENSGT00940000155119.g.a	ENSGT01080000257336.a.c.b.c.a	ENSGT00940000159656.a.a.b.b	ENSGT00940000153190.B.b	ENSGT00940000156577.a.d	ENSGT00940000156202.a.g.b	ENSGT00390000016597	ENSGT00940000156311.b.a.a	ENSGT00940000156022.b.i.a.b	ENSGT00390000001652.f.b.e	ENSGT00900000141090.s.a.a	ENSGT00390000010760.f #21	ENSGT01030000234579.C.t.a.a #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g.l	ENSGT00940000155050.a.g	ENSGT00940000157895.w.a	ENSGT00940000154713.A.c.a	ENSGT00940000159067	ENSGT00940000155651.c	ENSGT00500000044831.a.b.g.a	ENSGT00940000155962	ENSGT00940000162231	ENSGT00940000153460.c.a	ENSGT00940000158262.k
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000164964.a.b	ENSGT00940000160730.c.a	ENSGT00940000155119.g.a	ENSGT01080000257336.a.c.b.c.a	ENSGT00940000159656.a.a.b.b	ENSGT00940000153190.B.b	ENSGT00940000156577.a.d	ENSGT00940000156202.a.g.b	ENSGT00390000016597	ENSGT00940000156311.b.a.a	ENSGT00940000156022.b.i.a.b	ENSGT00390000001652.f.b.e	ENSGT00950000183153.c.b.a.a.i.a	ENSGT00900000141090.s.a.a	ENSGT00390000010760.f #21	ENSGT01030000234579.C.t.a.a #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00940000166460	ENSGT00530000063614.a.a	ENSGT00940000158737.g.l	ENSGT00940000155050.a.g	ENSGT00940000157895.w.a	ENSGT00940000154713.A.c.a	ENSGT00940000159067	ENSGT00940000155651.c	ENSGT00500000044831.a.b.g.a	ENSGT00940000155962	ENSGT00940000162231	ENSGT00940000153460.c.a	ENSGT00940000158262.k
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	30											NHS (ENSOTSG00005031476)	ENSOTSG00005031506	CDKL5 (ENSOTSG00005031507)	ENSOTSG00005031657	DPT (ENSOTSG00005031659) #21	ENSOTSG00005031660 #22	ENSOTSG00005031738	ENSOTSG00005031740	ENSOTSG00005031743	ENSOTSG00005031744	tp63 (ENSOTSG00005031749)	ENSOTSG00005031895	ENSOTSG00005031896	zbtb11 (ENSOTSG00005031898)	ENSOTSG00005000112	ENSOTSG00005000147	ENSOTSG00005000261	EPHB3 (ENSOTSG00005001367)	ENSOTSG00005001553	ENSOTSG00005001566	ENSOTSG00005001818
Chinook salmon	MODERN SPECIES	29		RS1 (ENSOTSG00005031475)	ENSOTSG00005031474	ENSOTSG00005031473	SLC35D1 (ENSOTSG00005031460)	ENSOTSG00005031449	ENSOTSG00005031447	chst12a (ENSOTSG00005031446)	pkn2b (ENSOTSG00005020874)	kyat3.2 (ENSOTSG00005020669)	ENSOTSG00005020665	ENSOTSG00005020660 #30	scyl3 (ENSOTSG00005020653) #33	si:dkey-97o5.1 (ENSOTSG00005020650) #32	si:dkey-51e6.1 (ENSOTSG00005020649)	ENSOTSG00005020490 #22	ENSOTSG00005020483	ENSOTSG00005020481	ENSOTSG00005020479	ENSOTSG00005020477	CNGA3 (ENSOTSG00005020476)	ENSOTSG00005020474	hspb8 (ENSOTSG00005020473)	ENSOTSG00005020471	ENSOTSG00005020469	ENSOTSG00005020406	GPR17 (ENSOTSG00005020397)	ENSOTSG00005020394	sap130a (ENSOTSG00005020391)	ENSOTSG00005020390	SLCO2A1 (ENSOTSG00005020360)
Coho salmon	MODERN SPECIES	24	ENSOKIG00005028052	ENSOKIG00005028034	ENSOKIG00005028010	rab6ba (ENSOKIG00005028000)	cep63 (ENSOKIG00005027981)	amotl2a (ENSOKIG00005027947)	ENSOKIG00005027688	smx5 (ENSOKIG00005027571)	bcl6aa (ENSOKIG00005027538)	lpp (ENSOKIG00005027460)	tprg1 (ENSOKIG00005018936)	ENSOKIG00005018912	tp63 (ENSOKIG00005017389)	zbtb11 (ENSOKIG00005016694)	dpt (ENSOKIG00005016658) #21	ATP1B1 (ENSOKIG00005016648) #22	nme7 (ENSOKIG00005016027) #23	zgc:172121 (ENSOKIG00005015966)	si:ch211-201h21.5 (ENSOKIG00005015953)	TMEM131 (ENSOKIG00005015534)	CNGA3 (ENSOKIG00005015475)	ube3a (ENSOKIG00005014593)	ENSOKIG00005014536	ATP10A (ENSOKIG00005013829)	GABRB3 (ENSOKIG00005013753)	nipa1 (ENSOKIG00005013739)	nipa2 (ENSOKIG00005013716)	cyfip1 (ENSOKIG00005013096)	tubgcp5 (ENSOKIG00005012714)	CHST7 (ENSOKIG00005012659)	ENSOKIG00005012655
Rainbow trout	MODERN SPECIES		ENSOMYG00000068867	ENSOMYG00000054022	ENSOMYG00000059166	lpp (ENSOMYG00000050394)	ENSOMYG00000064702	ENSOMYG00000003292	ENSOMYG00000000350	ENSOMYG00000001186	ENSOMYG00000077295	ENSOMYG00000001189	ENSOMYG00000000561	ENSOMYG00000000583	ENSOMYG00000000588	ENSOMYG00000000412	dpt (ENSOMYG00000077750) #21	ENSOMYG00000000460 #22	nme7 (ENSOMYG00000000475) #23	zgc:172121 (ENSOMYG00000001447)	ENSOMYG00000001467	si:ch211-201h21.5 (ENSOMYG00000001502)	ENSOMYG00000067656	ENSOMYG00000000403	ube3a (ENSOMYG00000001185)	ENSOMYG00000001424	GABRB3 (ENSOMYG00000001367)	nipa1 (ENSOMYG00000001322)	nipa2 (ENSOMYG00000001274)	cyfip1 (ENSOMYG00000056259)	ENSOMYG00000048481	tubgcp5 (ENSOMYG00000077012)	CHST7 (ENSOMYG00000016784)
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00940000157773	ENSGT00940000156970.c.b	ENSGT00940000160730.d	ENSGT00940000155119.g.b	ENSGT01080000257336.a.c.b.c.b	ENSGT00940000159656.a.a.a	ENSGT00940000156577.a.c	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a.g.a	ENSGT00940000156311.b.a.b	ENSGT00390000001652.f.b.f	ENSGT00950000183153.c.b.a.a.i.b.a	ENSGT00900000141090.s.a.b	ENSGT01030000234579.C.t.a.b #22	ENSGT00940000166950	ENSGT00960000192080	ENSGT00510000048601.a.k	ENSGT00940000158737.g.k	ENSGT00940000155050.a.h	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000155651.d	ENSGT00500000044831.a.b.g.b	ENSGT00940000158262.l	ENSGT00940000158722.q.a	ENSGT00940000166880	ENSGT00390000001397.h
Oncorhynchus_a	ANCESTRAL SPECIES	63	ENSGT00940000156474.a.b.c.a	ENSGT00940000157773	ENSGT00940000156970.c.b	ENSGT00940000160730.d	ENSGT00940000155119.g.b	ENSGT01080000257336.a.c.b.c.b	ENSGT00940000159656.a.a.a	ENSGT00940000156577.a.c	ENSGT00440000037733.f	ENSGT00940000157247.a.a	ENSGT01100000263537.b.a.a.b.a	ENSGT00940000156202.a.g.a	ENSGT00940000156311.b.a.b	ENSGT00950000183153.c.b.a.a.i.b.a	ENSGT00900000141090.s.a.b	ENSGT01030000234579.C.t.a.b #22	ENSGT00940000166950	ENSGT00510000048601.a.k	ENSGT00940000158737.g.k	ENSGT00940000155050.a.h	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000155651.d	ENSGT00500000044831.a.b.g.b	ENSGT00940000158262.l	ENSGT00940000158722.q.a	ENSGT00940000166880	ENSGT00390000001397.h	ENSGT00940000157095.e
Coho salmon	MODERN SPECIES	4	ENSOKIG00005016914	ENSOKIG00005016239	bcl6aa (ENSOKIG00005016148)	ENSOKIG00005016107	ENSOKIG00005016101	ENSOKIG00005016087	lpp (ENSOKIG00005044994)	ENSOKIG00005044986	tprg1 (ENSOKIG00005044977)	ENSOKIG00005044974	ENSOKIG00005044954	ENSOKIG00005044945	ENSOKIG00005044927	tp63 (ENSOKIG00005044575)	zbtb11 (ENSOKIG00005044536)	ATP1B1 (ENSOKIG00005044526) #22	ENSOKIG00005044502	BIVM (ENSOKIG00005044457)	ENSOKIG00005044448	CNGA3 (ENSOKIG00005044435)	ENSOKIG00005042404	GABRA5 (ENSOKIG00005042072)	ENSOKIG00005042040	GABRG3 (ENSOKIG00005042003)	OCA2 (ENSOKIG00005040294)	ENSOKIG00005040195	HERC2 (ENSOKIG00005033924)	nipa2 (ENSOKIG00005033580)	cyfip1 (ENSOKIG00005033147)	rp2 (ENSOKIG00005033107)	jade3 (ENSOKIG00005033037)
Rainbow trout	MODERN SPECIES	26		ENSOMYG00000028224	ENSOMYG00000060712	ENSOMYG00000015886	ENSOMYG00000058839	ENSOMYG00000029617	ENSOMYG00000014737	ENSOMYG00000075662	ENSOMYG00000015848	ENSOMYG00000014872	TPRG1 (ENSOMYG00000076052)	ENSOMYG00000055689	ENSOMYG00000066282	ENSOMYG00000005180	ENSOMYG00000067548	ENSOMYG00000002239 #22	ENSOMYG00000002206	ENSOMYG00000002176	ENSOMYG00000002266	ENSOMYG00000056827	ENSOMYG00000002359	ENSOMYG00000049309	GABRA5 (ENSOMYG00000002468)	ENSOMYG00000071632	GABRG3 (ENSOMYG00000014688)	OCA2 (ENSOMYG00000067038)	ENSOMYG00000059925	ENSOMYG00000049746	ENSOMYG00000060324	HERC2 (ENSOMYG00000066832)	ENSOMYG00000051435
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	66	ENSGT00940000154851.A.e	ENSGT00940000159723.j.b	ENSGT00940000157831.j.b	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000158209.h	ENSGT00940000154474.B.a.h	ENSGT00940000154474.B.b	ENSGT00940000157694.v	ENSGT00940000154505.A.c	ENSGT00390000001101.c.b.b.b	ENSGT00940000158209.g.a	ENSGT00940000154474.A	ENSGT00940000154474.B.a.g	ENSGT00390000001101.c.b.b.a	ENSGT01030000234579.C.t.b.a #22	ENSGT01030000234579.C.t.b.b #22	ENSGT00940000158737.h.c	ENSGT00940000155050.b.b	ENSGT00940000155502	ENSGT00390000003338.z	ENSGT00940000161508.b.o.b.a	ENSGT00940000161508.b.o.a	ENSGT00940000155126.s.a.k.b	ENSGT00390000004553.f.b.a.a	ENSGT00940000160059.a.b.a	ENSGT00550000075037.b	ENSGT00950000183165.a.a.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b.b.a.a	ENSGT00390000001718.b.b.b
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT01030000234579.C.t.b.a #22
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	631																ATP1B1 (ENSOKIG00005037072) #22
Coho salmon	MODERN SPECIES	7	MID1IP1 (ENSOKIG00005016539)	tspan7b (ENSOKIG00005016546)	ENSOKIG00005016561	ENSOKIG00005016580	ENSOKIG00005016700	dusp27 (ENSOKIG00005016765)	ENSOKIG00005016771	ENSOKIG00005016781	CREG1 (ENSOKIG00005016795) #7	ENSOKIG00005016802	f7 (ENSOKIG00005016822)	f7i (ENSOKIG00005016867)	f10 (ENSOKIG00005017006)	pcid2 (ENSOKIG00005017101)	ENSOKIG00005017177	atp1b1b (ENSOKIG00005017184) #22	TMEM131 (ENSOKIG00005017279)	CNGA3 (ENSOKIG00005018085)	UBE3A (ENSOKIG00005018121)	kpnb3 (ENSOKIG00005018345)	nudt15 (ENSOKIG00005018557)	cpo (ENSOKIG00005018596)	ENSOKIG00005018697
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000042709	ENSOMYG00000069191	STYXL2 (ENSOMYG00000051365)	ENSOMYG00000068460	CD247 (ENSOMYG00000059631)	CREG1 (ENSOMYG00000039299) #7	ENSOMYG00000052350	f7l (ENSOMYG00000050113)	f7 (ENSOMYG00000023107)	ENSOMYG00000065501	f7i (ENSOMYG00000073781)	f7i (ENSOMYG00000074198)	ENSOMYG00000065212	f10 (ENSOMYG00000008677)	pcid2 (ENSOMYG00000008742)	ENSOMYG00000008870 #22	ENSOMYG00000053905	ENSOMYG00000007384	ENSOMYG00000066580	ENSOMYG00000002611	ENSOMYG00000075093	cpo (ENSOMYG00000004234)	cpo (ENSOMYG00000004128)	fn1b (ENSOMYG00000006459)	ENSOMYG00000074661	ENSOMYG00000060190	atic (ENSOMYG00000008659)	ENSOMYG00000009675	stk16 (ENSOMYG00000009701)	tuba8l2 (ENSOMYG00000009711)	ENSOMYG00000060607
Oncorhynchus	ANCESTRAL SPECIES	66	ENSGT00940000159723.j.b	ENSGT00940000157831.j.b	ENSGT00390000018208	ENSGT00390000005914.a #7	ENSGT00940000158209.h	ENSGT00940000154474.B.a.h	ENSGT00940000154474.B.b	ENSGT00940000157694.v	ENSGT00940000154505.A.c	ENSGT00390000001101.c.b.b.b	ENSGT00940000158209.g.a	ENSGT00940000154474.A	ENSGT00940000154474.B.a.g	ENSGT00390000001101.c.b.b.a	ENSGT01030000234579.C.t.b.a #22	ENSGT01030000234579.C.t.b.b #22	ENSGT00940000158737.h.c	ENSGT00940000155050.b.b	ENSGT00940000155502	ENSGT00390000003338.z	ENSGT00940000161508.b.o.b.a	ENSGT00940000161508.b.o.a	ENSGT00940000155126.s.a.k.b	ENSGT00390000004553.f.b.a.a	ENSGT00940000160059.a.b.a	ENSGT00550000075037.b	ENSGT00950000183165.a.a.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b.b.a.a	ENSGT00390000001718.b.b.b	ENSGT01000000221844
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT01030000234579.C.t.b.b #22
Chinook salmon	MODERN SPECIES	1120																atp1b1b (ENSOTSG00005032328) #22
Coho salmon	MODERN SPECIES	678																ENSOKIG00005040443 #22	ENSOKIG00005040471
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000059766	ENSOMYG00000056943	ENSOMYG00000042658	STYXL2 (ENSOMYG00000059890)	ENSOMYG00000050933	cd3z (ENSOMYG00000049807)	CREG1 (ENSOMYG00000042779) #7	ENSOMYG00000042798	ENSOMYG00000042852	f7 (ENSOMYG00000042835)	f7i (ENSOMYG00000058058)	f7i (ENSOMYG00000005352)	f10 (ENSOMYG00000005561)	prozb (ENSOMYG00000073708)	pcid2 (ENSOMYG00000062291)	ENSOMYG00000060099 #22	ENSOMYG00000071238	ENSOMYG00000006431	ENSOMYG00000007510	ENSOMYG00000062246	ENSOMYG00000074365	ENSOMYG00000067824	cpo (ENSOMYG00000004299)	fn1b (ENSOMYG00000067929)	atic (ENSOMYG00000059980)	ENSOMYG00000055057	ENSOMYG00000007531	tuba8l2 (ENSOMYG00000007598)	ENSOMYG00000007694	ENSOMYG00000007725	ENSOMYG00000008885
Salmo	DUPLICATION
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	100	ENSGT00940000156153.z.a.a	ENSGT00940000159616.fc.a	ENSGT00940000155009.a.b.a.b	ENSGT00940000166110.i	ENSGT00940000154851.A.g	ENSGT00940000159723.g	ENSGT00940000157831.j.b.a	ENSGT00390000005914.a.c #7	ENSGT00940000158209.f	ENSGT00940000154474.B.a.g.d	ENSGT00940000154474.B.a.h	ENSGT00940000154474.B.b.a	ENSGT00940000157694.u.a	ENSGT00940000154505.A.c.c	ENSGT00390000001101.c.b.a	ENSGT01030000234579.C.u.a #22	ENSGT00530000063614.a.a.fb.a	ENSGT00940000158737.h.d	ENSGT00940000155050.b.a.a.b	ENSGT00940000155502.x	ENSGT00390000003338.z	ENSGT00940000161508.b.o.a.f	ENSGT00940000155126.s.a.k.b.a	ENSGT00390000004553.f.a.b
Atlantic salmon	MODERN SPECIES	8	tspan7b (ENSSSAG00000097329)	ENSSSAG00000079261	ENSSSAG00000120500	ENSSSAG00000007328	ENSSSAG00000043274	ENSSSAG00000096261	ENSSSAG00000098395	ENSSSAG00000043040	ENSSSAG00000084376 #7	ENSSSAG00000115840	f7 (ENSSSAG00000114558)	f7i (ENSSSAG00000111241)	f10 (ENSSSAG00000043518)	prozb (ENSSSAG00000092239)	pcid2 (ENSSSAG00000044313)	AT233 (ENSSSAG00000044419) #22	ENSSSAG00000006274	ENSSSAG00000114244	ENSSSAG00000006910	ENSSSAG00000103060	ENSSSAG00000108422	ENSSSAG00000082766	ENSSSAG00000009429	ENSSSAG00000107415	stk16 (ENSSSAG00000079250)	tuba8l2 (ENSSSAG00000015785)	ENSSSAG00000042186	ENSSSAG00000008545	ENSSSAG00000013302	ENSSSAG00000012823	ENSSSAG00000007072
River trout	MODERN SPECIES	32	ENSSTUG00000049216	ENSSTUG00000049213	cybb (ENSSTUG00000049153)	ENSSTUG00000049132	dusp27 (ENSSTUG00000049129)	ENSSTUG00000049115	ENSSTUG00000049111	creg1 (ENSSTUG00000049106) #7	ENSSTUG00000049098	ENSSTUG00000049097	f7 (ENSSTUG00000049085)	f7i (ENSSTUG00000049078)	f10 (ENSSTUG00000049047)	prozb (ENSSTUG00000049041)	pcid2 (ENSSTUG00000049019)	ATP1B1 (ENSSTUG00000049004) #22	TMEM131 (ENSSTUG00000048577)	CNGA3 (ENSSTUG00000048409)	ENSSTUG00000048245	kpnb3 (ENSSTUG00000047830)	nudt15 (ENSSTUG00000047788)	cpo (ENSSTUG00000047773)	cpo (ENSSTUG00000047754)	fn1b (ENSSTUG00000047017)	atic (ENSSTUG00000046839)	mnx2b (ENSSTUG00000046816)	stk16 (ENSSTUG00000046809)	tuba8l2 (ENSSTUG00000046796)	NR4A2 (ENSSTUG00000046787)	gpd2 (ENSSTUG00000046498)	pwp2h (ENSSTUG00000046190)
Salmo	ANCESTRAL SPECIES	108	ENSGT00990000204585.b.a.b	ENSGT00940000156153.z.a.b	ENSGT00940000159616.fc.b.b	ENSGT00940000155009.a.b.a.a	ENSGT00940000166110.j	ENSGT00940000154851.A.h	ENSGT00940000159723.h	ENSGT00940000157831.j.b.b	ENSGT00390000018208	ENSGT00390000005914.a.d #7	ENSGT00940000158209.e	ENSGT00940000154474.A	ENSGT00940000154474.B.a.g.c	ENSGT00940000154474.B.b.b	ENSGT00390000001101.c.a	ENSGT01030000234579.C.u.b #22	ENSGT00530000063614.a.a.fb.b	ENSGT00940000155502.w	ENSGT00390000003338.y	ENSGT00940000161508.b.o.b.a	ENSGT00940000161508.b.o.a.e	ENSGT00940000155126.s.a.k.b.b	ENSGT00390000004553.f.a.a	ENSGT00940000160059.a.b.a.d	ENSGT00550000075037.b.b	ENSGT00950000183165.a.a.b.e	ENSGT00950000183038.a.b.b.b.r.f	ENSGT00390000001718.b.b.a.b	ENSGT00550000074981	ENSGT01000000214434.B.a.b.a	ENSGT00990000204351.a
River trout	MODERN SPECIES	36	tspan7b (ENSSTUG00000009371)	rpgrb (ENSSTUG00000009393)	ENSSTUG00000009459	cybb (ENSSTUG00000009498)	ENSSTUG00000009569	dusp27 (ENSSTUG00000009584)	ENSSTUG00000009591	CD247 (ENSSTUG00000009599)	creg1 (ENSSTUG00000009616) #7	ENSSTUG00000009624	f7l (ENSSTUG00000009634)	f7 (ENSSTUG00000009639)	f7i (ENSSTUG00000009652)	prozb (ENSSTUG00000009665)	pcid2 (ENSSTUG00000009681)	atp1b1b (ENSSTUG00000009780) #22	TMEM131 (ENSSTUG00000009816)	CNGA3 (ENSSTUG00000010584)	UBE3A (ENSSTUG00000010620)	ENSSTUG00000011024	kpnb3 (ENSSTUG00000011045)	nudt15 (ENSSTUG00000011453)	cpo (ENSSTUG00000011487)	cpo (ENSSTUG00000011526)	fn1b (ENSSTUG00000011785)	atic (ENSSTUG00000018666)	mnx2b (ENSSTUG00000018928)	stk16 (ENSSTUG00000018934)	tuba8l2 (ENSSTUG00000018945)	nr4a2b (ENSSTUG00000018948)	gpd2 (ENSSTUG00000019084)
Atlantic salmon	MODERN SPECIES	7	RPGR (ENSSSAG00000055011)	ENSSSAG00000043290	ENSSSAG00000054895	ENSSSAG00000122111	ENSSSAG00000088747	STYXL2 (ENSSSAG00000054884)	ENSSSAG00000043051	CD247 (ENSSSAG00000055061)	CREG1 (ENSSSAG00000109988) #7	ENSSSAG00000055076	f7 (ENSSSAG00000055123)	f7i (ENSSSAG00000087792)	f10 (ENSSSAG00000055842)	prozb (ENSSSAG00000113317)	pcid2 (ENSSSAG00000055926)	AT233 (ENSSSAG00000008620) #22	ENSSSAG00000108016	ENSSSAG00000049578	ENSSSAG00000016020	ENSSSAG00000008813	ENSSSAG00000007260	cpo (ENSSSAG00000007265)	fn1b (ENSSSAG00000105424)	atic (ENSSSAG00000054060)	ENSSSAG00000082902	stk16 (ENSSSAG00000042133)	tuba8l2 (ENSSSAG00000042151)	ENSSSAG00000015387	ENSSSAG00000042287	ENSSSAG00000116115	ENSSSAG00000045894
Salmo	ANCESTRAL SPECIES	9	ENSGT00940000164964.a.b	ENSGT00940000160730.c.b	ENSGT00940000155119.g.a	ENSGT01080000257336.a.c.b.c.a	ENSGT00940000159656.a.a.b.a.b	ENSGT00940000153190.B.b	ENSGT00940000156577.a.d	ENSGT00940000156202.a.g.b	ENSGT00390000016597	ENSGT00940000156311.b.a.c	ENSGT00940000156022.b.i.a.b	ENSGT00390000001652.f.b.e	ENSGT00950000183153.c.b.a.a.i.a	ENSGT00900000141090.s.b	ENSGT00390000010760.f #21	ENSGT01030000234579.C.v #22	ENSGT00940000158946 #23	ENSGT00510000049619	ENSGT00940000166460	ENSGT00530000063614.a.a.gb	ENSGT00940000158737.g.l	ENSGT00940000155050.a.g	ENSGT00940000157895.x	ENSGT00940000154713.A.c.a	ENSGT00940000159067	ENSGT00940000155651.e	ENSGT00500000044831.a.b.g.a	ENSGT00940000155962	ENSGT00940000162231	ENSGT00940000153460.c.a	ENSGT00940000158262.i
River trout	DUPLICATION
River trout	MODERN SPECIES	14	ENSSTUG00000020169	ENSSTUG00000020179	SLCO2A1 (ENSSTUG00000020209)	rab6ba (ENSSTUG00000020240)	ENSSTUG00000020353	amotl2a (ENSSTUG00000020366)	sap130a (ENSSTUG00000020402)	MYO7B (ENSSTUG00000021272)	GPR17 (ENSSTUG00000022409)	ENSSTUG00000022440	bcl6aa (ENSSTUG00000023616)	lpp (ENSSTUG00000023695)	ENSSTUG00000023882	ENSSTUG00000023889	ENSSTUG00000023901	ATP1B1 (ENSSTUG00000023906) #22	ENSSTUG00000023920	BIVM (ENSSTUG00000023932)	CNGA3 (ENSSTUG00000024061)	ube3a (ENSSTUG00000024172)	GABRA5 (ENSSTUG00000026521)	ENSSTUG00000026550	gng13a (ENSSTUG00000026670)	GABRG3 (ENSSTUG00000026684)	ENSSTUG00000026702	OCA2 (ENSSTUG00000026716)	HERC2 (ENSSTUG00000026936)	nipa2 (ENSSTUG00000030362)	cyfip1 (ENSSTUG00000030385)	rp2 (ENSSTUG00000030837)	ENSSTUG00000030847
River trout	MODERN SPECIES	8	cep63 (ENSSTUG00000008265)	amotl2a (ENSSTUG00000008261)	ENSSTUG00000007849	si:ch73-14h10.2 (ENSSTUG00000007801)	bcl6aa (ENSSTUG00000007774)	ENSSTUG00000007763	ENSSTUG00000007758	lpp (ENSSTUG00000007717)	ENSSTUG00000007706	ENSSTUG00000007701	tprg1 (ENSSTUG00000007680)	ENSSTUG00000007674	tp63 (ENSSTUG00000006050)	zbtb11 (ENSSTUG00000005996)	dpt (ENSSTUG00000005988) #21	ATP1B1 (ENSSTUG00000005977) #22	nme7 (ENSSTUG00000005919) #23	zgc:172121 (ENSSTUG00000005903)	si:ch211-201h21.5 (ENSSTUG00000005893)	zgc:172121 (ENSSTUG00000005864)	TMEM131 (ENSSTUG00000002978)	CNGA3 (ENSSTUG00000002809)	ube3a (ENSSTUG00000002316)	ATP10A (ENSSTUG00000047133)	GABRB3 (ENSSTUG00000047073)	nipa1 (ENSSTUG00000047063)	nipa2 (ENSSTUG00000047057)	ENSSTUG00000047050	cyfip1 (ENSSTUG00000046923)	tubgcp5 (ENSSTUG00000045857)	CHST7 (ENSSTUG00000045784)
Atlantic salmon	MODERN SPECIES	1	rab6ba (ENSSSAG00000117122)	ENSSSAG00000093020	amotl2a (ENSSSAG00000053868)	sap130a (ENSSSAG00000053903)	ENSSSAG00000054831	ENSSSAG00000085760	ENSSSAG00000052012	bcl6aa (ENSSSAG00000051883)	lpp (ENSSSAG00000099194)	tprg1 (ENSSSAG00000068066)	tp63 (ENSSSAG00000006256)	ENSSSAG00000090324	ENSSSAG00000053855	ENSSSAG00000099477	ENSSSAG00000113656	AT233 (ENSSSAG00000053842) #22	ENSSSAG00000055019	ENSSSAG00000110987	ENSSSAG00000115122	bivm (ENSSSAG00000055006)	ENSSSAG00000054886	ENSSSAG00000048351	ENSSSAG00000116034	ENSSSAG00000093905	ENSSSAG00000092691	ENSSSAG00000055674	ENSSSAG00000008856	ENSSSAG00000024944	ENSSSAG00000009201	ENSSSAG00000111198	ENSSSAG00000107180
Spotted gar	MODERN SPECIES	655	fhl2b (ENSLOCG00000008763)	si:dkeyp-118h3.6 (ENSLOCG00000008750)	tgfbrap1 (ENSLOCG00000008737)	GPR45 (ENSLOCG00000017796)	mrps9 (ENSLOCG00000008722)	pou3f3b (ENSLOCG00000008712)	ENSLOCG00000008701	tmem182a (ENSLOCG00000008692)	MFSD9 (ENSLOCG00000008676)	slc9a2 (ENSLOCG00000008661)	inpp4ab (ENSLOCG00000008627)	gpr161b (ENSLOCG00000008616) #15	dcaf6 (ENSLOCG00000008600) #13	mpc2a (ENSLOCG00000008587) #12	dpt (ENSLOCG00000008571) #21	atp1b1b (ENSLOCG00000008556) #22	nme7 (ENSLOCG00000008530) #23	zgc:172121 (ENSLOCG00000008512)	BIVM (ENSLOCG00000008489)	si:ch211-201h21.5 (ENSLOCG00000008477)	TMEM131 (ENSLOCG00000008449)	ENSLOCG00000008427	CNGA3 (ENSLOCG00000008409)	ube3a (ENSLOCG00000008388)	ATP10A (ENSLOCG00000008355)	GABRB3 (ENSLOCG00000008344)	GABRA5 (ENSLOCG00000008325)	GABRG3 (ENSLOCG00000008316)	OCA2 (ENSLOCG00000008282)	HERC2 (ENSLOCG00000008243)	nipa1 (ENSLOCG00000008231)
Reedfish	MODERN SPECIES	12	mao (ENSECRG00000009478)	ENSECRG00000009463	efhc2 (ENSECRG00000009443)	fundc1 (ENSECRG00000009430)	KDM6A (ENSECRG00000009301)	DIPK2B (ENSECRG00000009248)	ccdc80 (ENSECRG00000009206)	slc35a5 (ENSECRG00000009180)	atg3 (ENSECRG00000009167)	f5 (ENSECRG00000009139) #27	SLC19A2 (ENSECRG00000009125) #26	gpr161b (ENSECRG00000009116) #15	dcaf6 (ENSECRG00000009077) #13	mpc2b (ENSECRG00000009061) #12	dpt (ENSECRG00000009051) #21	atp1b1b (ENSECRG00000009041) #22	nme7 (ENSECRG00000008946) #23	blzf1 (ENSECRG00000008907) #24	CCDC181 (ENSECRG00000008891) #25	cpox (ENSECRG00000008879)	prrg1 (ENSECRG00000008866)	tmem47 (ENSECRG00000008843)	ENSECRG00000008816	ENSECRG00000008807	dmd (ENSECRG00000006276)	tab3 (ENSECRG00000006070)	ENSECRG00000006049	zgc:172295 (ENSECRG00000006009)	FAM124A (ENSECRG00000005971)	serpine3 (ENSECRG00000005959)	ints6 (ENSECRG00000005943)
Elephant shark	MODERN SPECIES	1505	ENSCMIG00000005975	ENSCMIG00000005984	MMP7 (ENSCMIG00000005999)	MMP1 (ENSCMIG00000006020)	ENSCMIG00000006028	ENSCMIG00000006035	birc2 (ENSCMIG00000006045)	ENSCMIG00000006052	ENSCMIG00000006059	cfap300 (ENSCMIG00000006065)	yap1 (ENSCMIG00000006071)	ENSCMIG00000006074	ENSCMIG00000006076	ENSCMIG00000006080	dpt (ENSCMIG00000006082) #21	atp1b1b (ENSCMIG00000006084) #22	nme7 (ENSCMIG00000006099) #23	blzf1 (ENSCMIG00000006114) #24	ENSCMIG00000006115 #25	casq2 (ENSCMIG00000006130)	vangl1 (ENSCMIG00000006139)	nhlh2 (ENSCMIG00000006141)	SLC22A15 (ENSCMIG00000006160)	mab21l3 (ENSCMIG00000006180)	atp1a1a.2 (ENSCMIG00000007050)	ENSCMIG00000009372	ENSCMIG00000009374	ENSCMIG00000009376	ENSCMIG00000009378	ENSCMIG00000009381	TMCO3 (ENSCMIG00000009398)
Cyclostomata	ANCESTRAL SPECIES	239															ENSGT00390000010760 #21	ENSGT01030000234579.C #22	ENSGT00940000158946 #23
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	541										ENSEBUG00000007122	ENSEBUG00000005688	POLR2A (ENSEBUG00000013967)	rraga (ENSEBUG00000008941)	ddx3xb (ENSEBUG00000007692)	dpt (ENSEBUG00000013436) #21	ENSEBUG00000016623 #22	ENSEBUG00000004363 #23	ENSEBUG00000014382	ENSEBUG00000011234	cnpy3 (ENSEBUG00000007245)	ENSEBUG00000003872	ENSEBUG00000017068	usp9 (ENSEBUG00000012685)	ENSEBUG00000004507	ENSEBUG00000010671	uxs1 (ENSEBUG00000010358)	ENSEBUG00000012708	ENSEBUG00000007677	ENSEBUG00000002200	ENSEBUG00000007757	ENSEBUG00000006306
Hagfish	MODERN SPECIES	76															ENSEBUG00000014402	ENSEBUG00000013989 #22	ENSEBUG00000013032	ENSEBUG00000010841	ENSEBUG00000016520	ENSEBUG00000002469
Ciona	ANCESTRAL SPECIES	1435															ENSGT00390000008240.a	ENSGT01030000234579.C #22
Ciona savignyi	MODERN SPECIES	281	ENSCSAVG00000006499	ENSCSAVG00000006508	ENSCSAVG00000006510	ENSCSAVG00000006513	ENSCSAVG00000006838	ENSCSAVG00000006840	ENSCSAVG00000006844	ENSCSAVG00000006846	ENSCSAVG00000006848	ENSCSAVG00000006849	ENSCSAVG00000006850	ENSCSAVG00000006853	ENSCSAVG00000006855	ENSCSAVG00000006907	ENSCSAVG00000006920	ENSCSAVG00000006926 #22	ENSCSAVG00000006942	ENSCSAVG00000006947	ENSCSAVG00000006951	ENSCSAVG00000006960	ENSCSAVG00000006966	ENSCSAVG00000006967	ENSCSAVG00000006972	ENSCSAVG00000006984	ENSCSAVG00000007254	ENSCSAVG00000007257	ENSCSAVG00000007260	ENSCSAVG00000007262	ENSCSAVG00000007266	ENSCSAVG00000007284	ENSCSAVG00000007285
Ciona intestinalis	MODERN SPECIES	61	ENSCING00000016078	ENSCING00000016077	ENSCING00000016074	ENSCING00000023718	ENSCING00000025021	ENSCING00000016092	dsh (ENSCING00000009658)	ENSCING00000000096	ENSCING00000001592	ENSCING00000024175	ENSCING00000016115	ENSCING00000025189	ENSCING00000016175	ENSCING00000020277	ENSCING00000024341	ENSCING00000007867 #22	ENSCING00000000101	ENSCING00000021094	ENSCING00000019735	ENSCING00000000099	ENSCING00000000097	ENSCING00000000169	ENSCING00000001484	ENSCING00000020592	ENSCING00000001085	ENSCING00000018269	ENSCING00000020560	ENSCING00000001081	ENSCING00000015581	ENSCING00000010802	ENSCING00000001078
Ecdysozoa	DUPLICATION
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT01030000234579.C.a #22
Fruitfly	DUPLICATION
Fruitfly	MODERN SPECIES	19	CG3739 (FBgn0038702)	CG18493 (FBgn0038701)	CG3734 (FBgn0038700)	CG31245 (FBgn0051245)	CG31404 (FBgn0051404)	CG3581 (FBgn0038697)	Ino80 (FBgn0086613)	CG43203 (FBgn0262839)	Dl (FBgn0000463)	CG44174 (FBgn0265063)	CG14280 (FBgn0038695)	CG5217 (FBgn0038694)	unc79 (FBgn0038693)	Polr2M (FBgn0038692)	CG5250 (FBgn0038691) #22	CG11703 (FBgn0038690) #22	vib (FBgn0267975)	cry (FBgn0025680)	myd (FBgn0051475)	CG5555 (FBgn0038686)	CG14282 (FBgn0038685)	sqz (FBgn0010768)	CG42359 (FBgn0259705)	Nsun5 (FBgn0259704)	nos (FBgn0002962)	CG11779 (FBgn0038683)	CG5835 (FBgn0038682)	Ppcs (FBgn0261285)	Cyp12a4 (FBgn0038681)	Cyp12a5 (FBgn0038680)	CG6040 (FBgn0038679)
Fruitfly	MODERN SPECIES	19	CG31244 (FBgn0051244)	CG3739 (FBgn0038702)	CG18493 (FBgn0038701)	CG3734 (FBgn0038700)	CG31245 (FBgn0051245)	CG31404 (FBgn0051404)	CG3581 (FBgn0038697)	Ino80 (FBgn0086613)	CG43203 (FBgn0262839)	Dl (FBgn0000463)	CG44174 (FBgn0265063)	CG14280 (FBgn0038695)	CG5217 (FBgn0038694)	unc79 (FBgn0038693)	Polr2M (FBgn0038692)	CG5250 (FBgn0038691) #22	CG11703 (FBgn0038690) #22	vib (FBgn0267975)	cry (FBgn0025680)	myd (FBgn0051475)	CG5555 (FBgn0038686)	CG14282 (FBgn0038685)	sqz (FBgn0010768)	CG42359 (FBgn0259705)	Nsun5 (FBgn0259704)	nos (FBgn0002962)	CG11779 (FBgn0038683)	CG5835 (FBgn0038682)	Ppcs (FBgn0261285)	Cyp12a4 (FBgn0038681)	Cyp12a5 (FBgn0038680)
Caenorhabditis elegans	MODERN SPECIES	3	cal-4 (WBGene00000288)	C02F4.5 (WBGene00007265)	T07G12.2 (WBGene00011593)	T07G12.3 (WBGene00011594)	T07G12.4 (WBGene00011595)	T07G12.5 (WBGene00011596)	zim-1 (WBGene00011597)	zim-2 (WBGene00011600)	zim-3 (WBGene00011601)	him-8 (WBGene00001867)	efn-2 (WBGene00001163)	lgc-43 (WBGene00008076)	oac-8 (WBGene00008077)	C43F9.4 (WBGene00008072)	C43F9.5 (WBGene00008073)	nkb-2 (WBGene00008074) #22	C43F9.7 (WBGene00008075)	C43F9.11 (WBGene00045024)	R09H10.1 (WBGene00011179)	R09H10.2 (WBGene00011180)	R09H10.3 (WBGene00011181)	R09H10.6 (WBGene00011183)	ptr-14 (WBGene00004228)	R09H10.7 (WBGene00011184)	R09H10.5 (WBGene00011182)	F56C4.4 (WBGene00044977)	F56C4.1 (WBGene00010144)	F56C4.2 (WBGene00010145)	glb-19 (WBGene00010146)	K08C7.1 (WBGene00010646)	fmo-1 (WBGene00001476)
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT01030000234579.C.b #22
Fruitfly	DUPLICATION
Fruitfly	DUPLICATION
Fruitfly	MODERN SPECIES	16	CG32829 (FBgn0052829)	x16 (FBgn0028554)	Wee1 (FBgn0011737)	Rat1 (FBgn0031868)	Polr1F (FBgn0042092)	Nlg2 (FBgn0031866)	Nha1 (FBgn0031865)	l(2)k09022 (FBgn0086451)	Rca1 (FBgn0017551)	sens-2 (FBgn0051632)	CG17375 (FBgn0031861)	Daao2 (FBgn0031860)	CG17377 (FBgn0031859)	CG17376 (FBgn0042189)	CG43610 (FBgn0263585)	nrv2 (FBgn0015777) #22	nrv1 (FBgn0015776) #22	CG17378 (FBgn0031858)	LUBEL (FBgn0031857)	CG11322 (FBgn0031856)	CG44271 (FBgn0265257)	CG31910 (FBgn0051910)	meng (FBgn0031855)	TTLL3A (FBgn0031854)	TTLL3B (FBgn0031853)	Liprin-alpha (FBgn0046704)	homer (FBgn0025777)	Aatf (FBgn0031851)	AkhR (FBgn0025595)	Tsp (FBgn0031850)	CG11327 (FBgn0031849)
Fruitfly	MODERN SPECIES	16	CG8679 (FBgn0032934)	CG8677 (FBgn0026577)	CG31626 (FBgn0051626)	Hr39 (FBgn0261239)	l(2)k14505 (FBgn0021856)	CG8671 (FBgn0032938)	Mondo (FBgn0032940)	Gr39a (FBgn0264556)	crc (FBgn0000370)	CG46314 (FBgn0284230)	dimm (FBgn0023091)	Tsp39D (FBgn0032943)	dtr (FBgn0023090)	Gr39b (FBgn0041245)	CG8665 (FBgn0032945)	nrv3 (FBgn0032946) #22	His1:CG33801 (FBgn0053801)	His2B:CG33910 (FBgn0053910)	His4:CG33909 (FBgn0053909)	His3:CG33803 (FBgn0053803)	His1:CG31617 (FBgn0051617)	His2B:CG17949 (FBgn0061209)	His2A:CG31618 (FBgn0051618)	His4:CG31611 (FBgn0051611)	His3:CG31613 (FBgn0051613)	His1:CG33804 (FBgn0053804)	His2B:CG33908 (FBgn0053908)	His4:CG33907 (FBgn0053907)	His3:CG33806 (FBgn0053806)	His1:CG33807 (FBgn0053807)	His2B:CG33906 (FBgn0053906)
Fruitfly	MODERN SPECIES	16	x16 (FBgn0028554)	Wee1 (FBgn0011737)	Rat1 (FBgn0031868)	Polr1F (FBgn0042092)	Nlg2 (FBgn0031866)	Nha1 (FBgn0031865)	l(2)k09022 (FBgn0086451)	Rca1 (FBgn0017551)	sens-2 (FBgn0051632)	CG17375 (FBgn0031861)	Daao2 (FBgn0031860)	CG17377 (FBgn0031859)	CG17376 (FBgn0042189)	CG43610 (FBgn0263585)	nrv2 (FBgn0015777) #22	nrv1 (FBgn0015776) #22	CG17378 (FBgn0031858)	LUBEL (FBgn0031857)	CG11322 (FBgn0031856)	CG44271 (FBgn0265257)	CG31910 (FBgn0051910)	meng (FBgn0031855)	TTLL3A (FBgn0031854)	TTLL3B (FBgn0031853)	Liprin-alpha (FBgn0046704)	homer (FBgn0025777)	Aatf (FBgn0031851)	AkhR (FBgn0025595)	Tsp (FBgn0031850)	CG11327 (FBgn0031849)	Nhe3 (FBgn0028703)
Caenorhabditis elegans	DUPLICATION
Caenorhabditis elegans	MODERN SPECIES	6	sra-39 (WBGene00005065)	sra-38 (WBGene00005064)	sra-37 (WBGene00005063)	hlb-1 (WBGene00011904)	M03B6.3 (WBGene00010835)	M03B6.4 (WBGene00010836)	mct-3 (WBGene00010834)	M03B6.5 (WBGene00010837)	M03B6.1 (WBGene00010833)	F19D8.2 (WBGene00008955)	twk-23 (WBGene00006676)	obr-3 (WBGene00014215)	ZK1086.2 (WBGene00014216)	ZK1086.3 (WBGene00014217)	F55F3.4 (WBGene00010118)	nkb-3 (WBGene00010117) #22	cest-13 (WBGene00010116)	aakb-1 (WBGene00010115)	nhr-71 (WBGene00003661)	pix-1 (WBGene00010776)	K11E4.6 (WBGene00077679)	poml-1 (WBGene00010775)	K11E4.2 (WBGene00010774)	K11E4.1 (WBGene00010773)	K02D3.2 (WBGene00010505)	K02D3.1 (WBGene00010504)	adm-2 (WBGene00000074)	gck-4 (WBGene00007287)	C04A11.2 (WBGene00007286)	C04A11.5 (WBGene00007288)	C04A11.1 (WBGene00007285)
Caenorhabditis elegans	MODERN SPECIES		M04C9.3 (WBGene00010858)	M04C9.4 (WBGene00010859)	dyf-5 (WBGene00001121)	ppfr-1 (WBGene00008878)	rtcb-1 (WBGene00008877)	F16A11.1 (WBGene00008876)	C17E4.1 (WBGene00007641)	C17E4.19 (WBGene00219310)	C17E4.2 (WBGene00007642)	C17E4.20 (WBGene00219313)	marc-3 (WBGene00007643)	mjl-1 (WBGene00007644)	C17E4.11 (WBGene00044236)	pabp-2 (WBGene00003904)	C17E4.6 (WBGene00007645)	nkb-1 (WBGene00007646) #22	C17E4.10 (WBGene00007647)	mec-8 (WBGene00003172)	F46A9.1 (WBGene00009754)	F46A9.2 (WBGene00009755)	twk-29 (WBGene00006681)	skr-2 (WBGene00004808)	skr-1 (WBGene00004807)	calm-1 (WBGene00009260)	F30A10.14 (WBGene00045473)	F30A10.11 (WBGene00009268)	F30A10.13 (WBGene00044680)	F30A10.2 (WBGene00009261)	F30A10.12 (WBGene00009269)	F30A10.15 (WBGene00195244)	F30A10.4 (WBGene00009263)