Euteleostomi	ANCESTRAL SPECIES	47	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23
Sarcopterygii	ANCESTRAL SPECIES	86	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000166739	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00940000166913
Tetrapoda	ANCESTRAL SPECIES	46	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000166739	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Anura	ANCESTRAL SPECIES	77						ENSGT00390000011938 #11	ENSGT00390000005602 #12	ENSGT01010000229863 #13	ENSGT00940000155348.B #14	ENSGT00940000163871 #15	ENSGT00940000156584 #17	ENSGT00390000005672.a.a #18	ENSGT00940000158833 #19	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000167603.a #29	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000166739	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267	ENSGT00390000015009 #10
Frog	MODERN SPECIES	1	ENSXETG00000036591 #7	adam11 (ENSXETG00000003388) #8	dbf4b (ENSXETG00000003387) #9	ccdc43 (ENSXETG00000003386) #10	tmem101 (ENSXETG00000003382) #11	nags (ENSXETG00000003384) #12	ENSXETG00000034840 #13	mpp2 (ENSXETG00000003381) #14	ENSXETG00000003380 #15	ENSXETG00000041407 #16	col1a1 (ENSXETG00000003374) #17	rrp1b (ENSXETG00000003373) #18	ppp1r9b (ENSXETG00000003372) #19	XB6050834 [provisional:igfals] (ENSXETG00000041903) #20	lsm12 (ENSXETG00000003371) #21	g6pc3.1 (ENSXETG00000032824) #22	hdac5 (ENSXETG00000003365) #23	asb16 (ENSXETG00000003361) #24	hrob (ENSXETG00000039640) #25	ENSXETG00000040281 #26	tmub2 (ENSXETG00000035153) #27	atxn7l3 (ENSXETG00000027265) #28	ubtf (ENSXETG00000003356) #29	slc4a1 (ENSXETG00000007364) #30	rundc3a (ENSXETG00000007363) #31	ENSXETG00000038864 #32	ENSXETG00000041401 #33	slc35c2 (ENSXETG00000039564) #34	elmo2 (ENSXETG00000007361) #35	snrpb (ENSXETG00000027266) #36	znfx1 (ENSXETG00000007360) #37
Leishan spiny toad	MODERN SPECIES	3	ENSLLEG00000019273	ENSLLEG00000019262	ENSLLEG00000019235	DLX3 (ENSLLEG00000019199)	ITGA3 (ENSLLEG00000018562)	TMEM101 (ENSLLEG00000018483) #11	NAGS (ENSLLEG00000018403) #12	ENSLLEG00000018325	ENSLLEG00000018195 #13	MPP2 (ENSLLEG00000018006) #14	ENSLLEG00000017909 #15	COL1A1 (ENSLLEG00000017276) #17	ENSLLEG00000027472 #18	ENSLLEG00000027304 #20	LSM12 (ENSLLEG00000027205) #21	G6PC3 (ENSLLEG00000027161) #22	ENSLLEG00000027143	HDAC5 (ENSLLEG00000027006) #23	HROB (ENSLLEG00000026936) #25	ASB16 (ENSLLEG00000026905) #24	TMUB2 (ENSLLEG00000026886) #27	ATXN7L3 (ENSLLEG00000026817) #28	ENSLLEG00000026553 #29	ENSLLEG00000026516	SLC4A1 (ENSLLEG00000026211) #30	RUNDC3A (ENSLLEG00000025978) #31	ENSLLEG00000025870	ENSLLEG00000025857	ENSLLEG00000025821	FAM171A2 (ENSLLEG00000025703)	ITGA2B (ENSLLEG00000025553)
Amniota	ANCESTRAL SPECIES	14	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000166739	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00960000189914	ENSGT00940000161812
Mammalia	ANCESTRAL SPECIES	12	ENSGT00940000162259	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00960000189914
Theria	ANCESTRAL SPECIES	9	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000111487	ENSGT00940000156584 #17	ENSGT00390000014943	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00960000189914
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00960000189914
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Primates	ANCESTRAL SPECIES	3	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000148014	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190.b	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382.i	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Cebidae	ANCESTRAL SPECIES	25	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000148014	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190.b	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382.i	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Cebidae_a	ANCESTRAL SPECIES	17	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000148014	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190.b	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382.i	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Capuchin	MODERN SPECIES	571	MEOX1 (ENSCCAG00000025492)	ENSCCAG00000028188	ENSCCAG00000021758	SOST (ENSCCAG00000024063)	ENSCCAG00000033996	CFAP97D1 (ENSCCAG00000025057)	MPP3 (ENSCCAG00000031697)	CD300LG (ENSCCAG00000027434)	MPP2 (ENSCCAG00000012070) #14	ENSCCAG00000025350	PPY (ENSCCAG00000029696)	PYY (ENSCCAG00000031178)	NAGS (ENSCCAG00000021974) #12	TMEM101 (ENSCCAG00000032587) #11	LSM12 (ENSCCAG00000032905) #21	G6PC3 (ENSCCAG00000027267) #22	HDAC5 (ENSCCAG00000033739) #23	HROB (ENSCCAG00000031731) #25	ASB16 (ENSCCAG00000028541) #24	TMUB2 (ENSCCAG00000034702) #27	ATXN7L3 (ENSCCAG00000037617) #28	UBTF (ENSCCAG00000022278)	ENSCCAG00000023453	SLC4A1 (ENSCCAG00000028984) #30	RUNDC3A (ENSCCAG00000024019) #31	ENSCCAG00000021196	GRN (ENSCCAG00000034798)	FAM171A2 (ENSCCAG00000037030)	ITGA2B (ENSCCAG00000036665)	GPATCH8 (ENSCCAG00000030686)
Bolivian squirrel monkey	MODERN SPECIES	228	DHX8 (ENSSBOG00000031719)	ETV4 (ENSSBOG00000023700)	MEOX1 (ENSSBOG00000030202)	ENSSBOG00000020102	SOST (ENSSBOG00000034080)	ENSSBOG00000023932	CFAP97D1 (ENSSBOG00000029703)	MPP3 (ENSSBOG00000029629)	CD300LG (ENSSBOG00000034167)	MPP2 (ENSSBOG00000020704) #14	PPY (ENSSBOG00000030644)	PYY (ENSSBOG00000029297)	NAGS (ENSSBOG00000019481) #12	TMEM101 (ENSSBOG00000031569) #11	LSM12 (ENSSBOG00000025310) #21	G6PC3 (ENSSBOG00000024805) #22	HDAC5 (ENSSBOG00000026400) #23	HROB (ENSSBOG00000025771) #25	ASB16 (ENSSBOG00000029856) #24	TMUB2 (ENSSBOG00000030619) #27	ATXN7L3 (ENSSBOG00000034816) #28	UBTF (ENSSBOG00000024594)	SLC4A1 (ENSSBOG00000030510) #30	RUNDC3A (ENSSBOG00000027009) #31	ENSSBOG00000022997	GRN (ENSSBOG00000028093)	FAM171A2 (ENSSBOG00000030776)	ITGA2B (ENSSBOG00000027819)	GPATCH8 (ENSSBOG00000023544)	MEIOC (ENSSBOG00000023771)	CCDC43 (ENSSBOG00000019636) #10
Marmoset	MODERN SPECIES	17	NT5M (ENSCJAG00000031433)	ENSCJAG00000008879	ARL4D (ENSCJAG00000010785)	DHX8 (ENSCJAG00000010659)	ETV4 (ENSCJAG00000010626)	MEOX1 (ENSCJAG00000073036)	ENSCJAG00000068151	MPP3 (ENSCJAG00000010482)	CD300LG (ENSCJAG00000010468)	MPP2 (ENSCJAG00000010393) #14	PPY (ENSCJAG00000086810)	PYY (ENSCJAG00000010381)	NAGS (ENSCJAG00000010358) #12	TMEM101 (ENSCJAG00000010348) #11	LSM12 (ENSCJAG00000048480) #21	G6PC3 (ENSCJAG00000051252) #22	HDAC5 (ENSCJAG00000010230) #23	HROB (ENSCJAG00000010201) #25	ASB16 (ENSCJAG00000010192) #24	TMUB2 (ENSCJAG00000010189) #27	ATXN7L3 (ENSCJAG00000010161) #28	UBTF (ENSCJAG00000010066)	ENSCJAG00000042623	SLC4A1 (ENSCJAG00000010019) #30	RUNDC3A (ENSCJAG00000009984) #31	SLC25A39 (ENSCJAG00000009963)	GRN (ENSCJAG00000009903)	FAM171A2 (ENSCJAG00000009865)	ITGA2B (ENSCJAG00000009821)	GPATCH8 (ENSCJAG00000009807)	ENSCJAG00000067514
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	734	ETV4 (ENSANAG00000023869)	MEOX1 (ENSANAG00000030959)	ENSANAG00000031533	SOST (ENSANAG00000037984)	DUSP3 (ENSANAG00000038075)	CFAP97D1 (ENSANAG00000036975)	MPP3 (ENSANAG00000021858)	CD300LG (ENSANAG00000037437)	MPP2 (ENSANAG00000021147) #14	PPY (ENSANAG00000019878)	PYY (ENSANAG00000024213)	ENSANAG00000032679	NAGS (ENSANAG00000026942) #12	TMEM101 (ENSANAG00000033227) #11	LSM12 (ENSANAG00000029011) #21	ENSANAG00000033738 #22	HDAC5 (ENSANAG00000030832) #23	HROB (ENSANAG00000029216) #25	ASB16 (ENSANAG00000034056) #24	TMUB2 (ENSANAG00000034964) #27	ENSANAG00000009167	ENSANAG00000027458 #28	UBTF (ENSANAG00000028177)	SLC4A1 (ENSANAG00000035585) #30	RUNDC3A (ENSANAG00000001806) #31	ENSANAG00000024073	GRN (ENSANAG00000029542)	FAM171A2 (ENSANAG00000037123)	ITGA2B (ENSANAG00000032886)	GPATCH8 (ENSANAG00000032773)	FZD2 (ENSANAG00000021258)
Mas night monkey	MODERN SPECIES	835	SLC24A2 (ENSANAG00000029933)	MLLT3 (ENSANAG00000032095)	FOCAD (ENSANAG00000029314)	HACD4 (ENSANAG00000027847)	ENSANAG00000031381	KLHL9 (ENSANAG00000033732)	IFNE (ENSANAG00000027745)	MTAP (ENSANAG00000029387)	ENSANAG00000019784	CDKN2A (ENSANAG00000025540)	CDKN2B (ENSANAG00000018770)	DMRTA1 (ENSANAG00000021248)	ENSANAG00000029023	ELAVL2 (ENSANAG00000032553)	IZUMO3 (ENSANAG00000021921)	ENSANAG00000022652 #22	ENSANAG00000022457
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00860000136216	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643.g	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00860000136216	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000154018.a	ENSGT00390000018085.a.a.b.e.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643.g	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00860000136216	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000154018.a	ENSGT00390000018085.a.a.b.e.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643.g	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000154018.a	ENSGT00390000018085.a.a.b.e.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643.g	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.a.b.a.a.b.a	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.a.b.b
Rhesus	MODERN SPECIES	7	MEOX1 (ENSMMUG00000008995)	SOST (ENSMMUG00000058522)	ENSMMUG00000058019	CFAP97D1 (ENSMMUG00000060817)	MPP3 (ENSMMUG00000013260)	CD300LG (ENSMMUG00000013263)	MPP2 (ENSMMUG00000032617) #14	PPY (ENSMMUG00000003206)	PYY (ENSMMUG00000009715)	ENSMMUG00000062600	ENSMMUG00000062334	NAGS (ENSMMUG00000009713) #12	TMEM101 (ENSMMUG00000059624) #11	ENSMMUG00000064117 #20	LSM12 (ENSMMUG00000006804) #21	G6PC3 (ENSMMUG00000050615) #22	HDAC5 (ENSMMUG00000006806) #23	HROB (ENSMMUG00000006808) #25	ASB16 (ENSMMUG00000016867) #24	ENSMMUG00000050575	TMUB2 (ENSMMUG00000019920) #27	ATXN7L3 (ENSMMUG00000019923) #28	UBTF (ENSMMUG00000019924)	SLC4A1 (ENSMMUG00000017100) #30	RUNDC3A (ENSMMUG00000013983) #31	SLC25A39 (ENSMMUG00000017944)	GRN (ENSMMUG00000023751)	FAM171A2 (ENSMMUG00000041006)	ITGA2B (ENSMMUG00000012659)	GPATCH8 (ENSMMUG00000012658)	ENSMMUG00000054463
Crab-eating macaque	MODERN SPECIES	7	SOST (ENSMFAG00000064747)	ENSMFAG00000039165	CFAP97D1 (ENSMFAG00000056032)	MPP3 (ENSMFAG00000038172)	CD300LG (ENSMFAG00000030079)	ENSMFAG00000064121	MPP2 (ENSMFAG00000037677) #14	ENSMFAG00000059967	PPY (ENSMFAG00000038237)	ENSMFAG00000000034	ENSMFAG00000060833	NAGS (ENSMFAG00000033737) #12	TMEM101 (ENSMFAG00000033408) #11	ENSMFAG00000048601 #20	LSM12 (ENSMFAG00000031376) #21	G6PC3 (ENSMFAG00000001134) #22	HDAC5 (ENSMFAG00000043137) #23	HROB (ENSMFAG00000001047) #25	ASB16 (ENSMFAG00000032286) #24	TMUB2 (ENSMFAG00000043169) #27	ATXN7L3 (ENSMFAG00000001591) #28	UBTF (ENSMFAG00000041241)	ENSMFAG00000060282	ENSMFAG00000053891	SLC4A1 (ENSMFAG00000036520) #30	RUNDC3A (ENSMFAG00000039008) #31	SLC25A39 (ENSMFAG00000036322)	ENSMFAG00000062177	GRN (ENSMFAG00000038260)	ENSMFAG00000061181	ENSMFAG00000049144
Pig-tailed macaque	MODERN SPECIES	91	ETV4 (ENSMNEG00000031736)	MEOX1 (ENSMNEG00000036015)	ENSMNEG00000025001	ENSMNEG00000040442	SOST (ENSMNEG00000042716)	DUSP3 (ENSMNEG00000040768)	CFAP97D1 (ENSMNEG00000004052)	MPP3 (ENSMNEG00000028356)	CD300LG (ENSMNEG00000041459)	MPP2 (ENSMNEG00000035303) #14	PPY (ENSMNEG00000038186)	PYY (ENSMNEG00000038630)	NAGS (ENSMNEG00000033493) #12	TMEM101 (ENSMNEG00000035749) #11	ENSMNEG00000030594 #21	G6PC3 (ENSMNEG00000028716) #22	HDAC5 (ENSMNEG00000040426) #23	HROB (ENSMNEG00000038477) #25	ENSMNEG00000037038	ASB16 (ENSMNEG00000035701) #24	TMUB2 (ENSMNEG00000035142) #27	ATXN7L3 (ENSMNEG00000030632) #28	UBTF (ENSMNEG00000043586)	SLC4A1 (ENSMNEG00000041269) #30	ENSMNEG00000011218	RUNDC3A (ENSMNEG00000026490) #31	SLC25A39 (ENSMNEG00000036054)	GRN (ENSMNEG00000030808)	FAM171A2 (ENSMNEG00000038732)	ITGA2B (ENSMNEG00000036101)	GPATCH8 (ENSMNEG00000031426)
Cercopithecinae_b	ANCESTRAL SPECIES	19	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000018085.a.a.b.e.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643.g	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00860000136216	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Olive baboon	MODERN SPECIES	8	ENSPANG00000047472	MEOX1 (ENSPANG00000021370)	ENSPANG00000042401	SOST (ENSPANG00000021362)	DUSP3 (ENSPANG00000025484)	CFAP97D1 (ENSPANG00000035191)	MPP3 (ENSPANG00000021359)	CD300LG (ENSPANG00000021355)	MPP2 (ENSPANG00000021356) #14	PPY (ENSPANG00000029777)	PYY (ENSPANG00000021354)	NAGS (ENSPANG00000021353) #12	TMEM101 (ENSPANG00000021314) #11	ENSPANG00000037780 #20	LSM12 (ENSPANG00000021315) #21	G6PC3 (ENSPANG00000021316) #22	HDAC5 (ENSPANG00000021317) #23	HROB (ENSPANG00000021318) #25	ENSPANG00000050859	ENSPANG00000021319 #24	TMUB2 (ENSPANG00000021320) #27	ATXN7L3 (ENSPANG00000021322) #28	UBTF (ENSPANG00000021323)	SLC4A1 (ENSPANG00000021325) #30	RUNDC3A (ENSPANG00000021327) #31	SLC25A39 (ENSPANG00000021329)	GRN (ENSPANG00000021330)	FAM171A2 (ENSPANG00000021291)	ITGA2B (ENSPANG00000021298)	GPATCH8 (ENSPANG00000021304)	FZD2 (ENSPANG00000021305)
Cercopithecinae_d	ANCESTRAL SPECIES	96	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000018085.a.a.b.e.a	ENSGT00390000014900.b.b.b	ENSGT00910000147342	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643.g	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00860000136216	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Drill	MODERN SPECIES	931	ETV4 (ENSMLEG00000040157)	MEOX1 (ENSMLEG00000040809)	ENSMLEG00000011807	SOST (ENSMLEG00000036818)	ENSMLEG00000043780	ENSMLEG00000034330	CFAP97D1 (ENSMLEG00000034692)	MPP3 (ENSMLEG00000000632)	CD300LG (ENSMLEG00000043985)	MPP2 (ENSMLEG00000038355) #14	PPY (ENSMLEG00000039871)	PYY (ENSMLEG00000033607)	NAGS (ENSMLEG00000030808) #12	TMEM101 (ENSMLEG00000027626) #11	LSM12 (ENSMLEG00000039934) #21	G6PC3 (ENSMLEG00000034436) #22	HDAC5 (ENSMLEG00000036576) #23	HROB (ENSMLEG00000037146) #25	ASB16 (ENSMLEG00000040293) #24	TMUB2 (ENSMLEG00000031708) #27	ENSMLEG00000036748	ATXN7L3 (ENSMLEG00000031775) #28	UBTF (ENSMLEG00000029076)	SLC4A1 (ENSMLEG00000034232) #30	RUNDC3A (ENSMLEG00000034950) #31	SLC25A39 (ENSMLEG00000034591)	GRN (ENSMLEG00000022681)	ENSMLEG00000030950	ITGA2B (ENSMLEG00000035239)	GPATCH8 (ENSMLEG00000038860)	ENSMLEG00000030333
Sooty mangabey	MODERN SPECIES	112	ENSCATG00000017345	ENSCATG00000026315	SOST (ENSCATG00000039484)	ENSCATG00000039582	DUSP3 (ENSCATG00000040092)	ENSCATG00000042077	CFAP97D1 (ENSCATG00000042159)	MPP3 (ENSCATG00000043053)	CD300LG (ENSCATG00000020742)	MPP2 (ENSCATG00000039882) #14	PPY (ENSCATG00000036209)	PYY (ENSCATG00000042224)	NAGS (ENSCATG00000012659) #12	TMEM101 (ENSCATG00000029275) #11	ENSCATG00000030577 #21	G6PC3 (ENSCATG00000040047) #22	HDAC5 (ENSCATG00000033943) #23	HROB (ENSCATG00000035242) #25	ASB16 (ENSCATG00000041766) #24	TMUB2 (ENSCATG00000039532) #27	ATXN7L3 (ENSCATG00000032946) #28	UBTF (ENSCATG00000027991)	SLC4A1 (ENSCATG00000035475) #30	ENSCATG00000041302	RUNDC3A (ENSCATG00000042959) #31	SLC25A39 (ENSCATG00000035605)	GRN (ENSCATG00000039278)	FAM171A2 (ENSCATG00000043213)	ITGA2B (ENSCATG00000034498)	GPATCH8 (ENSCATG00000028156)	ENSCATG00000031513
Vervet Monkey	MODERN SPECIES	7	DHX8 (ENSCSAG00000003443)	ETV4 (ENSCSAG00000003449)	MEOX1 (ENSCSAG00000003450)	SOST (ENSCSAG00000003453)	DUSP3 (ENSCSAG00000003456)	CFAP97D1 (ENSCSAG00000003458)	MPP3 (ENSCSAG00000003463)	CD300LG (ENSCSAG00000003468)	MPP2 (ENSCSAG00000003472) #14	ENSCSAG00000003474	PPY (ENSCSAG00000003477)	PYY (ENSCSAG00000003480)	NAGS (ENSCSAG00000003482) #12	TMEM101 (ENSCSAG00000003484) #11	LSM12 (ENSCSAG00000003486) #21	G6PC3 (ENSCSAG00000003490) #22	HDAC5 (ENSCSAG00000003494) #23	HROB (ENSCSAG00000003497) #25	ASB16 (ENSCSAG00000003503) #24	TMUB2 (ENSCSAG00000003504) #27	ATXN7L3 (ENSCSAG00000003506) #28	UBTF (ENSCSAG00000003510)	SLC4A1 (ENSCSAG00000003533) #30	RUNDC3A (ENSCSAG00000003549) #31	SLC25A39 (ENSCSAG00000003554)	GRN (ENSCSAG00000003556)	FAM171A2 (ENSCSAG00000003558)	ITGA2B (ENSCSAG00000003577)	GPATCH8 (ENSCSAG00000003586)	FZD2 (ENSCSAG00000019022)	MEIOC (ENSCSAG00000003590)
Rhinopithecus	ANCESTRAL SPECIES	106											ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253.k #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Golden snub-nosed monkey	MODERN SPECIES	2894											PPY (ENSRROG00000033691)	PYY (ENSRROG00000030281)	NAGS (ENSRROG00000043486) #12	TMEM101 (ENSRROG00000030740) #11	ENSRROG00000045530 #21	G6PC3 (ENSRROG00000022124) #22	HDAC5 (ENSRROG00000029342) #23	HROB (ENSRROG00000035320) #25	ASB16 (ENSRROG00000044717) #24	TMUB2 (ENSRROG00000040301) #27	ATXN7L3 (ENSRROG00000040467) #28	UBTF (ENSRROG00000034506)	SLC4A1 (ENSRROG00000036677) #30	RUNDC3A (ENSRROG00000029233) #31	SLC25A39 (ENSRROG00000033931)	GRN (ENSRROG00000015788)	ENSRROG00000041994	ITGA2B (ENSRROG00000041860)	GPATCH8 (ENSRROG00000029623)	ENSRROG00000009542	ENSRROG00000033285
Black snub-nosed monkey	MODERN SPECIES	536											PPY (ENSRBIG00000028980)	PYY (ENSRBIG00000029470)	NAGS (ENSRBIG00000032101) #12	TMEM101 (ENSRBIG00000042126) #11	LSM12 (ENSRBIG00000027910) #21	G6PC3 (ENSRBIG00000034950) #22	HDAC5 (ENSRBIG00000032772) #23	ASB16 (ENSRBIG00000034555) #24	TMUB2 (ENSRBIG00000029488) #27	ATXN7L3 (ENSRBIG00000028756) #28	UBTF (ENSRBIG00000044486)	SLC4A1 (ENSRBIG00000033165) #30	RUNDC3A (ENSRBIG00000034091) #31	SLC25A39 (ENSRBIG00000002422)	GRN (ENSRBIG00000034421)	ENSRBIG00000027805	ITGA2B (ENSRBIG00000035637)	GPATCH8 (ENSRBIG00000033713)	ENSRBIG00000033468	MEIOC (ENSRBIG00000040900)	CCDC43 (ENSRBIG00000034075) #10
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648.c	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295.c	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648.c	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295.c	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648.c	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Gorilla	MODERN SPECIES	18	CCDC200 (ENSGGOG00000040466)	ENSGGOG00000036475	DHX8 (ENSGGOG00000000143)	ETV4 (ENSGGOG00000000144)	MEOX1 (ENSGGOG00000003046)	SOST (ENSGGOG00000003048)	DUSP3 (ENSGGOG00000023681)	CFAP97D1 (ENSGGOG00000023014)	MPP3 (ENSGGOG00000006981)	CD300LG (ENSGGOG00000009027)	PPY (ENSGGOG00000012845)	PYY (ENSGGOG00000008877)	NAGS (ENSGGOG00000008324) #12	TMEM101 (ENSGGOG00000008328) #11	ENSGGOG00000010589 #21	G6PC3 (ENSGGOG00000010599) #22	HDAC5 (ENSGGOG00000010608) #23	HROB (ENSGGOG00000003433) #25	ENSGGOG00000022373	ASB16 (ENSGGOG00000010951) #24	ENSGGOG00000037522	TMUB2 (ENSGGOG00000010956) #27	ATXN7L3 (ENSGGOG00000010959) #28	ENSGGOG00000037186	UBTF (ENSGGOG00000010964)	SLC4A1 (ENSGGOG00000010736) #30	RUNDC3A (ENSGGOG00000005834) #31	SLC25A39 (ENSGGOG00000005843)	GRN (ENSGGOG00000015827)	FAM171A2 (ENSGGOG00000015843)	ITGA2B (ENSGGOG00000012852)
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295.c	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648.c	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Pan	ANCESTRAL SPECIES	3	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00910000147342	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295.c	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648.c	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Bonobo	MODERN SPECIES	8	DHX8 (ENSPPAG00000042508)	ETV4 (ENSPPAG00000024983)	MEOX1 (ENSPPAG00000038321)	ENSPPAG00000036631	SOST (ENSPPAG00000038960)	DUSP3 (ENSPPAG00000036872)	CFAP97D1 (ENSPPAG00000034446)	MPP3 (ENSPPAG00000031569)	CD300LG (ENSPPAG00000011895)	MPP2 (ENSPPAG00000034198) #14	PPY (ENSPPAG00000036472)	PYY (ENSPPAG00000032981)	NAGS (ENSPPAG00000019790) #12	TMEM101 (ENSPPAG00000041985) #11	ENSPPAG00000034974 #21	G6PC3 (ENSPPAG00000041035) #22	HDAC5 (ENSPPAG00000031825) #23	HROB (ENSPPAG00000042958) #25	ENSPPAG00000001483	ASB16 (ENSPPAG00000032367) #24	TMUB2 (ENSPPAG00000035514) #27	ENSPPAG00000032123	ATXN7L3 (ENSPPAG00000041050) #28	ENSPPAG00000028996	UBTF (ENSPPAG00000041895)	SLC4A1 (ENSPPAG00000038599) #30	RUNDC3A (ENSPPAG00000041417) #31	SLC25A39 (ENSPPAG00000039768)	GRN (ENSPPAG00000033379)	ENSPPAG00000041757	ITGA2B (ENSPPAG00000039841)
Chimpanzee	MODERN SPECIES	8	DHX8 (ENSPTRG00000009246)	ETV4 (ENSPTRG00000009247)	MEOX1 (ENSPTRG00000009248)	ENSPTRG00000043480	SOST (ENSPTRG00000009249)	DUSP3 (ENSPTRG00000038773)	CFAP97D1 (ENSPTRG00000039467)	MPP3 (ENSPTRG00000009252)	CD300LG (ENSPTRG00000009253)	MPP2 (ENSPTRG00000009254) #14	PPY (ENSPTRG00000009257)	PYY (ENSPTRG00000009258)	NAGS (ENSPTRG00000009259) #12	TMEM101 (ENSPTRG00000009260) #11	LSM12 (ENSPTRG00000009261) #21	G6PC3 (ENSPTRG00000009262) #22	HDAC5 (ENSPTRG00000009263) #23	HROB (ENSPTRG00000009264) #25	ENSPTRG00000044517	ASB16 (ENSPTRG00000009265) #24	TMUB2 (ENSPTRG00000009266) #27	ATXN7L3 (ENSPTRG00000051178) #28	ENSPTRG00000050154	UBTF (ENSPTRG00000009269)	SLC4A1 (ENSPTRG00000009270) #30	RUNDC3A (ENSPTRG00000009271) #31	SLC25A39 (ENSPTRG00000009272)	GRN (ENSPTRG00000009273)	FAM171A2 (ENSPTRG00000009274)	ITGA2B (ENSPTRG00000009277)	GPATCH8 (ENSPTRG00000009278)
Human	MODERN SPECIES	8	ARL4D (ENSG00000175906)	DHX8 (ENSG00000067596)	ETV4 (ENSG00000175832)	MEOX1 (ENSG00000005102)	SOST (ENSG00000167941)	DUSP3 (ENSG00000108861)	CFAP97D1 (ENSG00000231256)	MPP3 (ENSG00000161647)	CD300LG (ENSG00000161649)	MPP2 (ENSG00000108852) #14	PPY (ENSG00000108849)	PYY (ENSG00000131096)	NAGS (ENSG00000161653) #12	TMEM101 (ENSG00000091947) #11	LSM12 (ENSG00000161654) #21	G6PC3 (ENSG00000141349) #22	HDAC5 (ENSG00000108840) #23	HROB (ENSG00000125319) #25	ASB16 (ENSG00000161664) #24	TMUB2 (ENSG00000168591) #27	ATXN7L3 (ENSG00000087152) #28	UBTF (ENSG00000108312)	SLC4A1 (ENSG00000004939) #30	RUNDC3A (ENSG00000108309) #31	SLC25A39 (ENSG00000013306)	GRN (ENSG00000030582)	FAM171A2 (ENSG00000161682)	ITGA2B (ENSG00000005961)	GPATCH8 (ENSG00000186566)	FZD2 (ENSG00000180340)	MEIOC (ENSG00000180336)
Orangutan	MODERN SPECIES	8	ARL4D (ENSPPYG00000008358)	DHX8 (ENSPPYG00000008357)	ETV4 (ENSPPYG00000031792)	MEOX1 (ENSPPYG00000008355)	SOST (ENSPPYG00000030075)	ENSPPYG00000032489	ENSPPYG00000040548	MPP3 (ENSPPYG00000008352)	CD300LG (ENSPPYG00000008351)	MPP2 (ENSPPYG00000008350) #14	PPY (ENSPPYG00000008347)	PYY (ENSPPYG00000020350)	NAGS (ENSPPYG00000008346) #12	TMEM101 (ENSPPYG00000031052) #11	LSM12 (ENSPPYG00000008344) #21	G6PC3 (ENSPPYG00000008343) #22	HDAC5 (ENSPPYG00000008342) #23	HROB (ENSPPYG00000008341) #25	ASB16 (ENSPPYG00000008339) #24	ENSPPYG00000008340	TMUB2 (ENSPPYG00000008338) #27	ENSPPYG00000033937	ATXN7L3 (ENSPPYG00000033444) #28	ENSPPYG00000036026	UBTF (ENSPPYG00000008337)	SLC4A1 (ENSPPYG00000008336) #30	RUNDC3A (ENSPPYG00000008334) #31	SLC25A39 (ENSPPYG00000008333)	GRN (ENSPPYG00000008332)	FAM171A2 (ENSPPYG00000008331)	ITGA2B (ENSPPYG00000008330)
Gibbon	MODERN SPECIES	9	ETV4 (ENSNLEG00000005715)	MEOX1 (ENSNLEG00000027201)	ENSNLEG00000027747	SOST (ENSNLEG00000005709)	ENSNLEG00000033838	ENSNLEG00000005702	CFAP97D1 (ENSNLEG00000029799)	MPP3 (ENSNLEG00000005653)	CD300LG (ENSNLEG00000005647)	MPP2 (ENSNLEG00000005615) #14	ENSNLEG00000031484	PYY (ENSNLEG00000005607)	NAGS (ENSNLEG00000005600) #12	TMEM101 (ENSNLEG00000035254) #11	ENSNLEG00000005580 #21	G6PC3 (ENSNLEG00000005556) #22	HDAC5 (ENSNLEG00000005540) #23	HROB (ENSNLEG00000005525) #25	ASB16 (ENSNLEG00000005518) #24	TMUB2 (ENSNLEG00000028172) #27	ENSNLEG00000030761	ATXN7L3 (ENSNLEG00000005507) #28	ENSNLEG00000031397	UBTF (ENSNLEG00000005450)	ENSNLEG00000028333	SLC4A1 (ENSNLEG00000005443) #30	RUNDC3A (ENSNLEG00000005436) #31	SLC25A39 (ENSNLEG00000005340)	GRN (ENSNLEG00000005286)	FAM171A2 (ENSNLEG00000005280)	FZD2 (ENSNLEG00000005276)
Tarsier	MODERN SPECIES	3310															LSM12 (ENSTSYG00000036361) #21	G6PC3 (ENSTSYG00000004887) #22	HDAC5 (ENSTSYG00000036703) #23
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Lemuriformes_a	ANCESTRAL SPECIES	145	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Greater bamboo lemur	MODERN SPECIES	1433	ENSPSMG00000009590	DHX8 (ENSPSMG00000009499)	ETV4 (ENSPSMG00000009360)	MEOX1 (ENSPSMG00000009325)	SOST (ENSPSMG00000009319)	ENSPSMG00000009310	CFAP97D1 (ENSPSMG00000009293)	MPP3 (ENSPSMG00000009274)	CD300LG (ENSPSMG00000009248)	MPP2 (ENSPSMG00000009188) #14	PPY (ENSPSMG00000009120)	PYY (ENSPSMG00000009115)	NAGS (ENSPSMG00000009101) #12	TMEM101 (ENSPSMG00000009093) #11	LSM12 (ENSPSMG00000009081) #21	G6PC3 (ENSPSMG00000009066) #22	HDAC5 (ENSPSMG00000008806) #23	HROB (ENSPSMG00000008482) #25	ENSPSMG00000008450	ASB16 (ENSPSMG00000008438) #24	TMUB2 (ENSPSMG00000008425) #27	ENSPSMG00000008412	ATXN7L3 (ENSPSMG00000008380) #28	UBTF (ENSPSMG00000008303)
Coquerels sifaka	MODERN SPECIES	758	ENSPCOG00000002614	ENSPCOG00000001983	ETV4 (ENSPCOG00000007003)	MEOX1 (ENSPCOG00000022715)	SOST (ENSPCOG00000022599)	DUSP3 (ENSPCOG00000021021)	CFAP97D1 (ENSPCOG00000028500)	MPP3 (ENSPCOG00000020205)	CD300LG (ENSPCOG00000009979)	MPP2 (ENSPCOG00000020352) #14	PPY (ENSPCOG00000002280)	PYY (ENSPCOG00000021430)	NAGS (ENSPCOG00000024426) #12	TMEM101 (ENSPCOG00000018250) #11	LSM12 (ENSPCOG00000027951) #21	G6PC3 (ENSPCOG00000019667) #22	HDAC5 (ENSPCOG00000028863) #23	HROB (ENSPCOG00000009997) #25	ASB16 (ENSPCOG00000028188) #24	TMUB2 (ENSPCOG00000028477) #27	ATXN7L3 (ENSPCOG00000009012) #28	UBTF (ENSPCOG00000028100)	SLC4A1 (ENSPCOG00000019431) #30	RUNDC3A (ENSPCOG00000015197) #31	SLC25A39 (ENSPCOG00000028823)	GRN (ENSPCOG00000004721)	FAM171A2 (ENSPCOG00000018913)	ITGA2B (ENSPCOG00000026060)	GPATCH8 (ENSPCOG00000019209)	FZD2 (ENSPCOG00000021320)
Mouse lemur	MODERN SPECIES	7	ARL4D (ENSMICG00000046097)	DHX8 (ENSMICG00000009509)	ETV4 (ENSMICG00000009518)	MEOX1 (ENSMICG00000005601)	SOST (ENSMICG00000042931)	ENSMICG00000047194	CFAP97D1 (ENSMICG00000043601)	MPP3 (ENSMICG00000005609)	CD300LG (ENSMICG00000005625)	MPP2 (ENSMICG00000005632) #14	PPY (ENSMICG00000042939)	PYY (ENSMICG00000005650)	NAGS (ENSMICG00000002597) #12	TMEM101 (ENSMICG00000044424) #11	LSM12 (ENSMICG00000037219) #21	G6PC3 (ENSMICG00000043360) #22	HDAC5 (ENSMICG00000002609) #23	HROB (ENSMICG00000002625) #25	ASB16 (ENSMICG00000043154) #24	TMUB2 (ENSMICG00000001309) #27	ATXN7L3 (ENSMICG00000001306) #28	UBTF (ENSMICG00000008107)	SLC4A1 (ENSMICG00000008130) #30	RUNDC3A (ENSMICG00000005113) #31	SLC25A39 (ENSMICG00000005118)	GRN (ENSMICG00000005124)	FAM171A2 (ENSMICG00000029059)	ITGA2B (ENSMICG00000005146)	GPATCH8 (ENSMICG00000028586)	FZD2 (ENSMICG00000004687)	ENSMICG00000035785
Bushbaby	MODERN SPECIES	133	ARL4D (ENSOGAG00000029839)	DHX8 (ENSOGAG00000010418)	ETV4 (ENSOGAG00000007666)	MEOX1 (ENSOGAG00000007673)	SOST (ENSOGAG00000007676)	DUSP3 (ENSOGAG00000032737)	CFAP97D1 (ENSOGAG00000008344)	MPP3 (ENSOGAG00000008346)	CD300LG (ENSOGAG00000008352)	MPP2 (ENSOGAG00000008355) #14	PPY (ENSOGAG00000008360)	PYY (ENSOGAG00000008362)	NAGS (ENSOGAG00000034762) #12	TMEM101 (ENSOGAG00000008363) #11	LSM12 (ENSOGAG00000010489) #21	G6PC3 (ENSOGAG00000010493) #22	HDAC5 (ENSOGAG00000010496) #23	HROB (ENSOGAG00000007208) #25	ASB16 (ENSOGAG00000013416) #24	TMUB2 (ENSOGAG00000013414) #27	ATXN7L3 (ENSOGAG00000024436) #28	UBTF (ENSOGAG00000028809)	SLC4A1 (ENSOGAG00000006791) #30	RUNDC3A (ENSOGAG00000030423) #31	SLC25A39 (ENSOGAG00000007292)	GRN (ENSOGAG00000015230)	FAM171A2 (ENSOGAG00000028741)	ITGA2B (ENSOGAG00000001856)	GPATCH8 (ENSOGAG00000033643)	FZD2 (ENSOGAG00000001863)	MEIOC (ENSOGAG00000001864)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Tree shrew	MODERN SPECIES	2962															ENSTBEG00000012523 #21	G6PC3 (ENSTBEG00000012538) #22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Muroidea	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Golden Hamster	MODERN SPECIES	637	Lyzl6 (ENSMAUG00000017802)	Rdm1 (ENSMAUG00000018559)	Arl4d (ENSMAUG00000017839)	ENSMAUG00000019891	Etv4 (ENSMAUG00000007463)	Meox1 (ENSMAUG00000001629)	Sost (ENSMAUG00000022271)	Dusp3 (ENSMAUG00000020330)	Cfap97d1 (ENSMAUG00000020798)	Mpp3 (ENSMAUG00000022029)	Cd300lg (ENSMAUG00000022269)	Mpp2 (ENSMAUG00000021461) #14	Pyy (ENSMAUG00000021649)	Nags (ENSMAUG00000021733) #12	Tmem101 (ENSMAUG00000010055) #11	G6pc3 (ENSMAUG00000010624) #22	Hdac5 (ENSMAUG00000002013) #23	Hrob (ENSMAUG00000005020) #25	Asb16 (ENSMAUG00000021436) #24	Tmub2 (ENSMAUG00000022177) #27	Atxn7l3 (ENSMAUG00000020586) #28	ENSMAUG00000022250	Ubtf (ENSMAUG00000021276)	Slc4a1 (ENSMAUG00000009605) #30	Rundc3a (ENSMAUG00000020597) #31	ENSMAUG00000005807	Grn (ENSMAUG00000006858)	Fam171a2 (ENSMAUG00000021377)	Itga2b (ENSMAUG00000022208)	Gpatch8 (ENSMAUG00000021770)	Fzd2 (ENSMAUG00000021965)
Chinese hamster chok1gshd	MODERN SPECIES	33	Arl4d (ENSCGRG00001011460)	Dhx8 (ENSCGRG00001021413)	Etv4 (ENSCGRG00001023226)	Meox1 (ENSCGRG00001021575)	Sost (ENSCGRG00001019868)	Dusp3 (ENSCGRG00001014521)	Cfap97d1 (ENSCGRG00001011987)	Mpp3 (ENSCGRG00001020467)	Cd300lg (ENSCGRG00001021598)	Mpp2 (ENSCGRG00001005227) #14	Ppy (ENSCGRG00001020365)	Pyy (ENSCGRG00001014986)	Nags (ENSCGRG00001014516) #12	Tmem101 (ENSCGRG00001006689) #11	Lsm12 (ENSCGRG00001002094) #21	G6pc3 (ENSCGRG00001014065) #22	Hdac5 (ENSCGRG00001022072) #23	Hrob (ENSCGRG00001012238) #25	Asb16 (ENSCGRG00001000867) #24	Tmub2 (ENSCGRG00001019475) #27	ENSCGRG00001011323	Atxn7l3 (ENSCGRG00001003041) #28	Ubtf (ENSCGRG00001014549)	ENSCGRG00001012586	Slc4a1 (ENSCGRG00001024402) #30	Rundc3a (ENSCGRG00001005014) #31	Slc25a39 (ENSCGRG00001012093)	Grn (ENSCGRG00001009446)	Fam171a2 (ENSCGRG00001000671)	Itga2b (ENSCGRG00001022417)	Gpatch8 (ENSCGRG00001020210)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Prairie vole	MODERN SPECIES	127	Arl4d (ENSMOCG00000002133)	Dhx8 (ENSMOCG00000008962)	Etv4 (ENSMOCG00000008532)	Meox1 (ENSMOCG00000019448)	Sost (ENSMOCG00000016461)	Dusp3 (ENSMOCG00000012923)	Cfap97d1 (ENSMOCG00000005556)	Mpp3 (ENSMOCG00000021231)	Cd300lg (ENSMOCG00000014735)	Mpp2 (ENSMOCG00000016871) #14	Ppy (ENSMOCG00000019905)	Pyy (ENSMOCG00000013439)	Nags (ENSMOCG00000010479) #12	Tmem101 (ENSMOCG00000019196) #11	ENSMOCG00000019878 #21	G6pc3 (ENSMOCG00000011983) #22	Hdac5 (ENSMOCG00000000884) #23	Hrob (ENSMOCG00000004299) #25	Asb16 (ENSMOCG00000001272) #24	Tmub2 (ENSMOCG00000002498) #27	ENSMOCG00000020535 #28	Ubtf (ENSMOCG00000019457)	Slc4a1 (ENSMOCG00000015280) #30	Rundc3a (ENSMOCG00000021651) #31	Slc25a39 (ENSMOCG00000012298)	Grn (ENSMOCG00000018374)	Fam171a2 (ENSMOCG00000016416)	Itga2b (ENSMOCG00000013669)	Gpatch8 (ENSMOCG00000001658)	Fzd2 (ENSMOCG00000005570)	Meioc (ENSMOCG00000012671)
Northern American deer mouse	MODERN SPECIES	21	Dhx8 (ENSPEMG00000012654)	Etv4 (ENSPEMG00000007946)	Meox1 (ENSPEMG00000007512)	Sost (ENSPEMG00000006845)	Dusp3 (ENSPEMG00000001837)	Cfap97d1 (ENSPEMG00000000836)	Mpp3 (ENSPEMG00000016469)	Cd300lg (ENSPEMG00000015765)	Mpp2 (ENSPEMG00000014403) #14	Ppy (ENSPEMG00000013434)	Pyy (ENSPEMG00000013081)	ENSPEMG00000028918	Nags (ENSPEMG00000015143) #12	Tmem101 (ENSPEMG00000014843) #11	Lsm12 (ENSPEMG00000012199) #21	G6pc3 (ENSPEMG00000011025) #22	Hdac5 (ENSPEMG00000010094) #23	Hrob (ENSPEMG00000000892) #25	Asb16 (ENSPEMG00000000410) #24	Tmub2 (ENSPEMG00000018010) #27	Atxn7l3 (ENSPEMG00000015373) #28	Ubtf (ENSPEMG00000008414)	Slc4a1 (ENSPEMG00000001535) #30	Rundc3a (ENSPEMG00000017416) #31	Slc25a39 (ENSPEMG00000014785)	Foxd4 (ENSPEMG00000030417)	Grn (ENSPEMG00000013392)	Fam171a2 (ENSPEMG00000009288)	Itga2b (ENSPEMG00000000114)	Gpatch8 (ENSPEMG00000008337)	Fzd2 (ENSPEMG00000006155)
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Mus	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00860000135945
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956.o #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00860000135945
Mouse	MODERN SPECIES	2	Arl4d (ENSMUSG00000034936)	Dhx8 (ENSMUSG00000034931)	Etv4 (ENSMUSG00000017724)	Meox1 (ENSMUSG00000001493)	Sost (ENSMUSG00000001494)	Dusp3 (ENSMUSG00000003518)	Cfap97d1 (ENSMUSG00000010841)	Mpp3 (ENSMUSG00000052373)	Cd300lg (ENSMUSG00000017309)	Mpp2 (ENSMUSG00000017314) #14	Ppy (ENSMUSG00000017316)	Pyy (ENSMUSG00000017311)	Nags (ENSMUSG00000048217) #12	Tmem101 (ENSMUSG00000020921) #11	Lsm12 (ENSMUSG00000020922) #21	G6pc3 (ENSMUSG00000034793) #22	Hdac5 (ENSMUSG00000008855) #23	Hrob (ENSMUSG00000034773) #25	Asb16 (ENSMUSG00000034768) #24	Tmub2 (ENSMUSG00000034757) #27	Atxn7l3 (ENSMUSG00000059995) #28	Ubtf (ENSMUSG00000020923)	Slc4a1 (ENSMUSG00000006574) #30	Rundc3a (ENSMUSG00000006575) #31	Slc25a39 (ENSMUSG00000018677)	Grn (ENSMUSG00000034708)	Fam171a2 (ENSMUSG00000034685)	Itga2b (ENSMUSG00000034664)	Gpatch8 (ENSMUSG00000034621)	Fzd2 (ENSMUSG00000050288)	Meioc (ENSMUSG00000051455)
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956.o #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00860000135945
Steppe mouse	MODERN SPECIES	3424	Arl4d (ENSMSIG00000028444)	Dhx8 (ENSMSIG00000028411)	Etv4 (ENSMSIG00000028392)	Meox1 (ENSMSIG00000028389)	Sost (ENSMSIG00000028386)	ENSMSIG00000028364	Cfap97d1 (ENSMSIG00000028338)	Mpp3 (ENSMSIG00000028303)	Cd300lg (ENSMSIG00000028274)	Mpp2 (ENSMSIG00000028254) #14	Ppy (ENSMSIG00000028245)	Pyy (ENSMSIG00000028233)	Nags (ENSMSIG00000028230) #12	Tmem101 (ENSMSIG00000028225) #11	Lsm12 (ENSMSIG00000028214) #21	G6pc3 (ENSMSIG00000028201) #22	Hdac5 (ENSMSIG00000028119) #23	Hrob (ENSMSIG00000028105) #25	Asb16 (ENSMSIG00000028098) #24	Tmub2 (ENSMSIG00000028085) #27	ENSMSIG00000028083	Atxn7l3 (ENSMSIG00000028080) #28	Ubtf (ENSMSIG00000028054)	Slc4a1 (ENSMSIG00000028043) #30	Rundc3a (ENSMSIG00000027985) #31	Slc25a39 (ENSMSIG00000027972)	Grn (ENSMSIG00000027964)	Fam171a2 (ENSMSIG00000027952)	Itga2b (ENSMSIG00000027924)	ENSMSIG00000027921	Gpatch8 (ENSMSIG00000027905)
spretus	MODERN SPECIES	2	Arl4d (MGP_SPRETEiJ_G0018070)	Dhx8 (MGP_SPRETEiJ_G0018071)	Etv4 (MGP_SPRETEiJ_G0018072)	Meox1 (MGP_SPRETEiJ_G0018073)	Sost (MGP_SPRETEiJ_G0018074)	Dusp3 (MGP_SPRETEiJ_G0018075)	Cfap97d1 (MGP_SPRETEiJ_G0018076)	Mpp3 (MGP_SPRETEiJ_G0018077)	Cd300lg (MGP_SPRETEiJ_G0018078)	Mpp2 (MGP_SPRETEiJ_G0018079) #14	Ppy (MGP_SPRETEiJ_G0018080)	Pyy (MGP_SPRETEiJ_G0018081)	Nags (MGP_SPRETEiJ_G0018082) #12	Tmem101 (MGP_SPRETEiJ_G0018083) #11	Lsm12 (MGP_SPRETEiJ_G0018084) #21	G6pc3 (MGP_SPRETEiJ_G0018085) #22	Hdac5 (MGP_SPRETEiJ_G0018086) #23	Hrob (MGP_SPRETEiJ_G0018087) #25	Asb16 (MGP_SPRETEiJ_G0018088) #24	Tmub2 (MGP_SPRETEiJ_G0018089) #27	Atxn7l3 (MGP_SPRETEiJ_G0018090) #28	Ubtf (MGP_SPRETEiJ_G0018091)	Slc4a1 (MGP_SPRETEiJ_G0018092) #30	Rundc3a (MGP_SPRETEiJ_G0018093) #31	Slc25a39 (MGP_SPRETEiJ_G0018094)	Grn (MGP_SPRETEiJ_G0018095)	Fam171a2 (MGP_SPRETEiJ_G0018096)	Itga2b (MGP_SPRETEiJ_G0018097)	Gpatch8 (MGP_SPRETEiJ_G0018098)	MGP_SPRETEiJ_G0018099	Fzd2 (MGP_SPRETEiJ_G0018100)
Ryukyu mouse	MODERN SPECIES	2	Arl4d (MGP_CAROLIEiJ_G0017227)	Dhx8 (MGP_CAROLIEiJ_G0017228)	Etv4 (MGP_CAROLIEiJ_G0017229)	Meox1 (MGP_CAROLIEiJ_G0017230)	Sost (MGP_CAROLIEiJ_G0017231)	Dusp3 (MGP_CAROLIEiJ_G0017232)	Cfap97d1 (MGP_CAROLIEiJ_G0017233)	Mpp3 (MGP_CAROLIEiJ_G0017234)	Cd300lg (MGP_CAROLIEiJ_G0017235)	Mpp2 (MGP_CAROLIEiJ_G0017236) #14	Ppy (MGP_CAROLIEiJ_G0017237)	Pyy (MGP_CAROLIEiJ_G0017238)	Nags (MGP_CAROLIEiJ_G0017239) #12	Tmem101 (MGP_CAROLIEiJ_G0017240) #11	Lsm12 (MGP_CAROLIEiJ_G0017241) #21	G6pc3 (MGP_CAROLIEiJ_G0017242) #22	Hdac5 (MGP_CAROLIEiJ_G0017243) #23	Hrob (MGP_CAROLIEiJ_G0017244) #25	Asb16 (MGP_CAROLIEiJ_G0017245) #24	Tmub2 (MGP_CAROLIEiJ_G0017246) #27	Atxn7l3 (MGP_CAROLIEiJ_G0017247) #28	Ubtf (MGP_CAROLIEiJ_G0017248)	Slc4a1 (MGP_CAROLIEiJ_G0017249) #30	Rundc3a (MGP_CAROLIEiJ_G0017250) #31	Slc25a39 (MGP_CAROLIEiJ_G0017251)	Grn (MGP_CAROLIEiJ_G0017252)	Fam171a2 (MGP_CAROLIEiJ_G0017253)	Itga2b (MGP_CAROLIEiJ_G0017254)	Gpatch8 (MGP_CAROLIEiJ_G0017255)	MGP_CAROLIEiJ_G0017256	Fzd2 (MGP_CAROLIEiJ_G0017257)
Shrew mouse	MODERN SPECIES	5	Arl4d (MGP_PahariEiJ_G0018357)	Dhx8 (MGP_PahariEiJ_G0018358)	Etv4 (MGP_PahariEiJ_G0018359)	Meox1 (MGP_PahariEiJ_G0018360)	Sost (MGP_PahariEiJ_G0018361)	Dusp3 (MGP_PahariEiJ_G0018362)	Cfap97d1 (MGP_PahariEiJ_G0018363)	Mpp3 (MGP_PahariEiJ_G0018364)	Cd300lg (MGP_PahariEiJ_G0018365)	Mpp2 (MGP_PahariEiJ_G0018366) #14	Ppy (MGP_PahariEiJ_G0018367)	Pyy (MGP_PahariEiJ_G0018368)	Nags (MGP_PahariEiJ_G0018369) #12	Tmem101 (MGP_PahariEiJ_G0018370) #11	Lsm12 (MGP_PahariEiJ_G0018371) #21	G6pc3 (MGP_PahariEiJ_G0018372) #22	Hdac5 (MGP_PahariEiJ_G0018373) #23	Hrob (MGP_PahariEiJ_G0018374) #25	Asb16 (MGP_PahariEiJ_G0018375) #24	Tmub2 (MGP_PahariEiJ_G0018376) #27	Atxn7l3 (MGP_PahariEiJ_G0018377) #28	Ubtf (MGP_PahariEiJ_G0018378)	Slc4a1 (MGP_PahariEiJ_G0018379) #30	Rundc3a (MGP_PahariEiJ_G0018380) #31	MGP_PahariEiJ_G0018381	Grn (MGP_PahariEiJ_G0018382)	Fam171a2 (MGP_PahariEiJ_G0018383)	Itga2b (MGP_PahariEiJ_G0018384)	Gpatch8 (MGP_PahariEiJ_G0018385)	MGP_PahariEiJ_G0018386	Fzd2 (MGP_PahariEiJ_G0018387)
Rat	MODERN SPECIES	1	Sap18 (ENSRNOG00000020771)	Dhx8 (ENSRNOG00000020772)	Etv4 (ENSRNOG00000020792)	Meox1 (ENSRNOG00000020803)	Sost (ENSRNOG00000071073)	Dusp3 (ENSRNOG00000036798)	Cfap97d1 (ENSRNOG00000036796)	Mpp3 (ENSRNOG00000033653)	Cd300lg (ENSRNOG00000020837)	Mpp2 (ENSRNOG00000059683) #14	Ppy (ENSRNOG00000020874)	Pyy (ENSRNOG00000020877)	Nags (ENSRNOG00000020879) #12	Tmem101 (ENSRNOG00000054581) #11	Lsm12 (ENSRNOG00000020894) #21	G6pc3 (ENSRNOG00000020902) #22	Hdac5 (ENSRNOG00000020905) #23	Hrob (ENSRNOG00000020908) #25	Asb16 (ENSRNOG00000036794) #24	Tmub2 (ENSRNOG00000020916) #27	Atxn7l3 (ENSRNOG00000020930) #28	Ubtf (ENSRNOG00000020937)	Slc4a1 (ENSRNOG00000020951) #30	ENSRNOG00000066543	Rundc3a (ENSRNOG00000020970) #31	Slc25a39 (ENSRNOG00000020994)	Grn (ENSRNOG00000021031)	Fam171a2 (ENSRNOG00000021041)	Itga2b (ENSRNOG00000022071)	Gpatch8 (ENSRNOG00000021044)	Fzd2 (ENSRNOG00000021962)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Arl4d (ENSNGAG00000022765)	Dhx8 (ENSNGAG00000023993)	Etv4 (ENSNGAG00000004428)	Meox1 (ENSNGAG00000021050)	Sost (ENSNGAG00000021822)	Dusp3 (ENSNGAG00000016282)	Cfap97d1 (ENSNGAG00000005879)	ENSNGAG00000020953	Cd300lg (ENSNGAG00000022075)	Mpp2 (ENSNGAG00000023977) #14	Ppy (ENSNGAG00000016781)	Pyy (ENSNGAG00000012624)	Nags (ENSNGAG00000005511) #12	Tmem101 (ENSNGAG00000018442) #11	ENSNGAG00000001870 #21	G6pc3 (ENSNGAG00000015831) #22	Hdac5 (ENSNGAG00000019645) #23	Hrob (ENSNGAG00000001824) #25	Asb16 (ENSNGAG00000023532) #24	Tmub2 (ENSNGAG00000011219) #27	Atxn7l3 (ENSNGAG00000013430) #28	Ubtf (ENSNGAG00000012462)	Slc4a1 (ENSNGAG00000014797) #30	Rundc3a (ENSNGAG00000015390) #31	Slc25a39 (ENSNGAG00000018633)	Grn (ENSNGAG00000019481)	Fam171a2 (ENSNGAG00000020020)	Itga2b (ENSNGAG00000021680)	Gpatch8 (ENSNGAG00000021860)	Fzd2 (ENSNGAG00000013523)	Meioc (ENSNGAG00000022546)
Lesser Egyptian jerboa	MODERN SPECIES	56	Slc25a10 (ENSJJAG00000016619)	Dhx8 (ENSJJAG00000017249)	Etv4 (ENSJJAG00000016456)	Meox1 (ENSJJAG00000016085)	Sost (ENSJJAG00000015417)	Dusp3 (ENSJJAG00000016149)	Cfap97d1 (ENSJJAG00000016413)	Mpp3 (ENSJJAG00000017494)	Cd300lg (ENSJJAG00000017510)	Mpp2 (ENSJJAG00000017170) #14	Ppy (ENSJJAG00000022697)	Pyy (ENSJJAG00000015690)	Nags (ENSJJAG00000017289) #12	Tmem101 (ENSJJAG00000015883) #11	ENSJJAG00000004364 #21	G6pc3 (ENSJJAG00000017684) #22	Hdac5 (ENSJJAG00000020345) #23	Hrob (ENSJJAG00000020790) #25	Asb16 (ENSJJAG00000018156) #24	Tmub2 (ENSJJAG00000016128) #27	Atxn7l3 (ENSJJAG00000016172) #28	Ubtf (ENSJJAG00000016751)	Slc4a1 (ENSJJAG00000009023) #30	Rundc3a (ENSJJAG00000017813) #31	ENSJJAG00000017539	ENSJJAG00000018882	Grn (ENSJJAG00000017666)	ENSJJAG00000017437	Itga2b (ENSJJAG00000018679)	Gpatch8 (ENSJJAG00000017797)	Fzd2 (ENSJJAG00000017757)
Kangaroo rat	MODERN SPECIES	466	Arl4d (ENSDORG00000023792)	Dhx8 (ENSDORG00000013845)	Etv4 (ENSDORG00000013847)	Meox1 (ENSDORG00000029778)	Sost (ENSDORG00000015097)	Dusp3 (ENSDORG00000015098)	Cfap97d1 (ENSDORG00000024464)	Mpp3 (ENSDORG00000015099)	Cd300lg (ENSDORG00000014972)	Mpp2 (ENSDORG00000014973) #14	Ppy (ENSDORG00000001660)	Pyy (ENSDORG00000001658)	Nags (ENSDORG00000010837) #12	Tmem101 (ENSDORG00000010838) #11	Lsm12 (ENSDORG00000016381) #21	G6pc3 (ENSDORG00000026943) #22	Hdac5 (ENSDORG00000016382) #23	Hrob (ENSDORG00000013194) #25	Asb16 (ENSDORG00000013196) #24	Tmub2 (ENSDORG00000013199) #27	Atxn7l3 (ENSDORG00000013200) #28	Ubtf (ENSDORG00000013203)	Slc4a1 (ENSDORG00000011346) #30	Rundc3a (ENSDORG00000023934) #31	Slc25a39 (ENSDORG00000011847)	Grn (ENSDORG00000005772)	Fam171a2 (ENSDORG00000005773)	Itga2b (ENSDORG00000005776)	Gpatch8 (ENSDORG00000027664)	Fzd2 (ENSDORG00000014118)	Meioc (ENSDORG00000014320)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Marmotini_b	ANCESTRAL SPECIES	38	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Arctic ground squirrel	MODERN SPECIES	537	ARL4D (ENSUPAG00010003187)	DHX8 (ENSUPAG00010003167)	ETV4 (ENSUPAG00010002956)	MEOX1 (ENSUPAG00010002951)	SOST (ENSUPAG00010002948)	ENSUPAG00010002931	CFAP97D1 (ENSUPAG00010002923)	MPP3 (ENSUPAG00010002862)	CD300LG (ENSUPAG00010002777)	MPP2 (ENSUPAG00010002698) #14	PPY (ENSUPAG00010002689)	PYY (ENSUPAG00010002683)	NAGS (ENSUPAG00010002675) #12	TMEM101 (ENSUPAG00010002669) #11	LSM12 (ENSUPAG00010002664) #21	G6PC3 (ENSUPAG00010002647) #22	HDAC5 (ENSUPAG00010002429) #23	HROB (ENSUPAG00010002395) #25	ASB16 (ENSUPAG00010002388) #24	TMUB2 (ENSUPAG00010002382) #27	ENSUPAG00010002381	ATXN7L3 (ENSUPAG00010002358) #28	UBTF (ENSUPAG00010002259)	SLC4A1 (ENSUPAG00010002226) #30	RUNDC3A (ENSUPAG00010002071) #31	SLC25A39 (ENSUPAG00010002043)	GRN (ENSUPAG00010002001)	FAM171A2 (ENSUPAG00010001985)	ITGA2B (ENSUPAG00010001927)	GPATCH8 (ENSUPAG00010001900)	FZD2 (ENSUPAG00010001893)
Squirrel	MODERN SPECIES	141	ARL4D (ENSSTOG00000000518)	DHX8 (ENSSTOG00000013747)	ETV4 (ENSSTOG00000013774)	MEOX1 (ENSSTOG00000013785)	SOST (ENSSTOG00000021662)	ENSSTOG00000013789	CFAP97D1 (ENSSTOG00000022017)	MPP3 (ENSSTOG00000007277)	CD300LG (ENSSTOG00000007312)	MPP2 (ENSSTOG00000007325) #14	PPY (ENSSTOG00000007364)	PYY (ENSSTOG00000024941)	NAGS (ENSSTOG00000007381) #12	TMEM101 (ENSSTOG00000007398) #11	LSM12 (ENSSTOG00000007403) #21	G6PC3 (ENSSTOG00000007423) #22	HDAC5 (ENSSTOG00000026259) #23	HROB (ENSSTOG00000013098) #25	ASB16 (ENSSTOG00000029101) #24	TMUB2 (ENSSTOG00000016549) #27	ATXN7L3 (ENSSTOG00000027076) #28	UBTF (ENSSTOG00000029137)	SLC4A1 (ENSSTOG00000006533) #30	RUNDC3A (ENSSTOG00000004171) #31	SLC25A39 (ENSSTOG00000004189)	GRN (ENSSTOG00000004204)	FAM171A2 (ENSSTOG00000028462)	ITGA2B (ENSSTOG00000004233)	GPATCH8 (ENSSTOG00000025022)	FZD2 (ENSSTOG00000027061)	MEIOC (ENSSTOG00000013666)
Alpin marmot	MODERN SPECIES	42	ARL4D (ENSMMMG00000004599)	DHX8 (ENSMMMG00000004545)	ETV4 (ENSMMMG00000004509)	MEOX1 (ENSMMMG00000004500)	SOST (ENSMMMG00000004496)	ENSMMMG00000004452	CFAP97D1 (ENSMMMG00000004438)	MPP3 (ENSMMMG00000004345)	CD300LG (ENSMMMG00000004246)	MPP2 (ENSMMMG00000004166) #14	PPY (ENSMMMG00000004144)	PYY (ENSMMMG00000004118)	NAGS (ENSMMMG00000004109) #12	TMEM101 (ENSMMMG00000004095) #11	LSM12 (ENSMMMG00000004083) #21	G6PC3 (ENSMMMG00000004069) #22	HDAC5 (ENSMMMG00000003869) #23	HROB (ENSMMMG00000003819) #25	ASB16 (ENSMMMG00000003804) #24	ENSMMMG00000003793	TMUB2 (ENSMMMG00000003784) #27	ENSMMMG00000003781	ATXN7L3 (ENSMMMG00000003746) #28	UBTF (ENSMMMG00000003518)	SLC4A1 (ENSMMMG00000003472) #30	RUNDC3A (ENSMMMG00000003338) #31	SLC25A39 (ENSMMMG00000003284)	GRN (ENSMMMG00000003248)	ENSMMMG00000003230	ITGA2B (ENSMMMG00000003175)	ENSMMMG00000003164
Eurasian red squirrel	MODERN SPECIES	12	DHX8 (ENSSVLG00005002357)	ETV4 (ENSSVLG00005002252)	MEOX1 (ENSSVLG00005002186)	ENSSVLG00005002160	SOST (ENSSVLG00005002149)	DUSP3 (ENSSVLG00005002133)	CFAP97D1 (ENSSVLG00005002118)	MPP3 (ENSSVLG00005002051)	CD300LG (ENSSVLG00005001945)	MPP2 (ENSSVLG00005001843) #14	PPY (ENSSVLG00005001821)	PYY (ENSSVLG00005001806)	NAGS (ENSSVLG00005001776) #12	TMEM101 (ENSSVLG00005001745) #11	LSM12 (ENSSVLG00005001711) #21	G6PC3 (ENSSVLG00005001688) #22	HDAC5 (ENSSVLG00005001604) #23	HROB (ENSSVLG00005001504) #25	ASB16 (ENSSVLG00005001463) #24	TMUB2 (ENSSVLG00005001434) #27	ENSSVLG00005001407	ATXN7L3 (ENSSVLG00005001392) #28	UBTF (ENSSVLG00005001329)	SLC4A1 (ENSSVLG00005001224) #30	RUNDC3A (ENSSVLG00005001151) #31	SLC25A39 (ENSSVLG00005001051)	GRN (ENSSVLG00005000988)	FAM171A2 (ENSSVLG00005000926)	ITGA2B (ENSSVLG00005000827)	GPATCH8 (ENSSVLG00005000756)	FZD2 (ENSSVLG00005000735)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000161546	ENSGT00940000161341.b	ENSGT00940000155510.db	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000154628.C	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00960000189914	ENSGT00940000161812
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000050278	DHX8 (ENSHGLG00000011583)	ETV4 (ENSHGLG00000011286)	MEOX1 (ENSHGLG00000013678)	SOST (ENSHGLG00000012172)	DUSP3 (ENSHGLG00000050495)	CFAP97D1 (ENSHGLG00000013368)	MPP3 (ENSHGLG00000011058)	ENSHGLG00000034523	MPP2 (ENSHGLG00000009770) #14	ENSHGLG00000011831	PYY (ENSHGLG00000033184)	NAGS (ENSHGLG00000010233) #12	TMEM101 (ENSHGLG00000046440) #11	LSM12 (ENSHGLG00000050842) #21	G6PC3 (ENSHGLG00000043749) #22	ENSHGLG00000042379 #25	TMUB2 (ENSHGLG00000007515) #27	ENSHGLG00000013149 #28	UBTF (ENSHGLG00000006625)	SLC4A1 (ENSHGLG00000016913) #30	RUNDC3A (ENSHGLG00000017650) #31	SLC25A39 (ENSHGLG00000048120)	GRN (ENSHGLG00000010728)	FAM171A2 (ENSHGLG00000041698)	ITGA2B (ENSHGLG00000011773)	GPATCH8 (ENSHGLG00000042737)	ENSHGLG00000046586	FZD2 (ENSHGLG00000021338)	MEIOC (ENSHGLG00000013724)	CCDC43 (ENSHGLG00000010178) #10
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000161546	ENSGT00940000161341.b	ENSGT00940000155510.db	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000154628.C	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Guinea pig	MODERN SPECIES	67						SOST (ENSCPOG00000036004)	ENSCPOG00000037301	CFAP97D1 (ENSCPOG00000019309)	MPP3 (ENSCPOG00000025647)	MPP2 (ENSCPOG00000023271) #14	ENSCPOG00000024599	PYY (ENSCPOG00000023437)	NAGS (ENSCPOG00000002610) #12	TMEM101 (ENSCPOG00000030978) #11	LSM12 (ENSCPOG00000012860) #21	G6PC3 (ENSCPOG00000002601) #22	HDAC5 (ENSCPOG00000025458) #23	ENSCPOG00000021687 #25	ASB16 (ENSCPOG00000035086) #24	TMUB2 (ENSCPOG00000007784) #27	ATXN7L3 (ENSCPOG00000027448) #28	UBTF (ENSCPOG00000009039)	SLC4A1 (ENSCPOG00000023295) #30	RUNDC3A (ENSCPOG00000024590) #31	SLC25A39 (ENSCPOG00000021740)	GRN (ENSCPOG00000008789)	FAM171A2 (ENSCPOG00000010204)	ITGA2B (ENSCPOG00000006801)	GPATCH8 (ENSCPOG00000039068)	FZD2 (ENSCPOG00000033417)	MEIOC (ENSCPOG00000022459)
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000161546	ENSGT00940000161341.b	ENSGT00940000155510.db	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000154628.C	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267	ENSGT00390000015009 #10
Long-tailed chinchilla	MODERN SPECIES	158	NBR1 (ENSCLAG00000016213)	TMEM106A (ENSCLAG00000016845)	ARL4D (ENSCLAG00000018100)	DHX8 (ENSCLAG00000016045)	ETV4 (ENSCLAG00000016646)	MEOX1 (ENSCLAG00000015784)	SOST (ENSCLAG00000015935)	ENSCLAG00000015990	CFAP97D1 (ENSCLAG00000016049)	MPP3 (ENSCLAG00000015665)	MPP2 (ENSCLAG00000015141) #14	PPY (ENSCLAG00000014670)	NAGS (ENSCLAG00000015091) #12	TMEM101 (ENSCLAG00000015361) #11	LSM12 (ENSCLAG00000015759) #21	G6PC3 (ENSCLAG00000014421) #22	HDAC5 (ENSCLAG00000015499) #23	ENSCLAG00000015374 #24	TMUB2 (ENSCLAG00000017138) #27	ATXN7L3 (ENSCLAG00000015820) #28	UBTF (ENSCLAG00000016520)	SLC4A1 (ENSCLAG00000015354) #30	RUNDC3A (ENSCLAG00000016257) #31	SLC25A39 (ENSCLAG00000017101)	GRN (ENSCLAG00000015498)	ITGA2B (ENSCLAG00000016572)	GPATCH8 (ENSCLAG00000016710)	MEIOC (ENSCLAG00000016838)	CCDC43 (ENSCLAG00000016525) #10	ADAM11 (ENSCLAG00000015429) #8	GJC1 (ENSCLAG00000016073)
Degu	MODERN SPECIES	97	TMEM106A (ENSODEG00000017980)	ARL4D (ENSODEG00000020552)	DHX8 (ENSODEG00000018025)	ETV4 (ENSODEG00000018019)	MEOX1 (ENSODEG00000017988)	SOST (ENSODEG00000018036)	ENSODEG00000018097	CFAP97D1 (ENSODEG00000018093)	MPP3 (ENSODEG00000018129)	MPP2 (ENSODEG00000018167) #14	PPY (ENSODEG00000018077)	PYY (ENSODEG00000018008)	NAGS (ENSODEG00000018118) #12	TMEM101 (ENSODEG00000018086) #11	ENSODEG00000017998 #21	G6PC3 (ENSODEG00000018176) #22	HDAC5 (ENSODEG00000018114) #23	ASB16 (ENSODEG00000018023) #24	TMUB2 (ENSODEG00000018010) #27	ATXN7L3 (ENSODEG00000018003) #28	UBTF (ENSODEG00000018087)	SLC4A1 (ENSODEG00000018199) #30	RUNDC3A (ENSODEG00000018079) #31	SLC25A39 (ENSODEG00000018066)	GRN (ENSODEG00000018021)	ENSODEG00000018005	ITGA2B (ENSODEG00000018065)	GPATCH8 (ENSODEG00000018121)	ENSODEG00000020549	ENSODEG00000018026	FZD2 (ENSODEG00000020558)
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Pika	MODERN SPECIES	2642													NAGS (ENSOPRG00000008533) #12	TMEM101 (ENSOPRG00000008544) #11	LSM12 (ENSOPRG00000008552) #21	G6PC3 (ENSOPRG00000008560) #22	HDAC5 (ENSOPRG00000008571) #23	HROB (ENSOPRG00000008621) #25	ASB16 (ENSOPRG00000008641) #24	ATXN7L3 (ENSOPRG00000008655) #28	UBTF (ENSOPRG00000008676)	SLC4A1 (ENSOPRG00000008702) #30	ENSOPRG00000018940	RUNDC3A (ENSOPRG00000008726) #31	SLC25A39 (ENSOPRG00000008742)	GRN (ENSOPRG00000008758)	ITGA2B (ENSOPRG00000008781)	GPATCH8 (ENSOPRG00000008816)
Rabbit	MODERN SPECIES	10	ARL4D (ENSOCUG00000004788)	DHX8 (ENSOCUG00000008014)	ETV4 (ENSOCUG00000008031)	MEOX1 (ENSOCUG00000002945)	SOST (ENSOCUG00000002947)	ENSOCUG00000016062	CFAP97D1 (ENSOCUG00000016064)	MPP3 (ENSOCUG00000003314)	CD300LG (ENSOCUG00000008504)	MPP2 (ENSOCUG00000011582) #14	PPY (ENSOCUG00000028083)	ENSOCUG00000013068	NAGS (ENSOCUG00000013025) #12	TMEM101 (ENSOCUG00000013030) #11	ENSOCUG00000008566 #21	G6PC3 (ENSOCUG00000008570) #22	HDAC5 (ENSOCUG00000008574) #23	HROB (ENSOCUG00000008590) #25	ASB16 (ENSOCUG00000008601) #24	TMUB2 (ENSOCUG00000024120) #27	ENSOCUG00000030224	ATXN7L3 (ENSOCUG00000008613) #28	UBTF (ENSOCUG00000023028)	SLC4A1 (ENSOCUG00000004499) #30	SLC25A39 (ENSOCUG00000006447)	RUNDC3A (ENSOCUG00000006437) #31	GRN (ENSOCUG00000013567)	ENSOCUG00000013577	ITGA2B (ENSOCUG00000003273)	GPATCH8 (ENSOCUG00000003291)	ENSOCUG00000014730
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Suina	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Pig	MODERN SPECIES	3	DHX8 (ENSSSCG00000017378)	ETV4 (ENSSSCG00000017379)	ENSSSCG00000017377	MEOX1 (ENSSSCG00000017376)	SOST (ENSSSCG00000039204)	DUSP3 (ENSSSCG00000020744)	CFAP97D1 (ENSSSCG00000017373)	MPP3 (ENSSSCG00000017372)	ENSSSCG00000023014	MPP2 (ENSSSCG00000017367) #14	PPY (ENSSSCG00000017368)	ENSSSCG00000025414	NAGS (ENSSSCG00000024179) #12	TMEM101 (ENSSSCG00000017371) #11	LSM12 (ENSSSCG00000056031) #21	G6PC3 (ENSSSCG00000017365) #22	HDAC5 (ENSSSCG00000017366) #23	HROB (ENSSSCG00000017364) #25	ENSSSCG00000036358	ASB16 (ENSSSCG00000039673) #24	TMUB2 (ENSSSCG00000022837) #27	ENSSSCG00000032455	ATXN7L3 (ENSSSCG00000017362) #28	UBTF (ENSSSCG00000017360)	SLC4A1 (ENSSSCG00000017358) #30	RUNDC3A (ENSSSCG00000017359) #31	SLC25A39 (ENSSSCG00000030167)	GRN (ENSSSCG00000017355)	FAM171A2 (ENSSSCG00000058254)	ITGA2B (ENSSSCG00000063008)	GPATCH8 (ENSSSCG00000017357)
Chacoan peccary	MODERN SPECIES	941	DHX8 (ENSCWAG00000019520)	ETV4 (ENSCWAG00000019564)	MEOX1 (ENSCWAG00000019759)	ENSCWAG00000019791	SOST (ENSCWAG00000019801)	DUSP3 (ENSCWAG00000019808)	CFAP97D1 (ENSCWAG00000019823)	MPP3 (ENSCWAG00000019850)	ENSCWAG00000019909	MPP2 (ENSCWAG00000019933) #14	PPY (ENSCWAG00000019980)	PYY (ENSCWAG00000019995)	NAGS (ENSCWAG00000020020) #12	TMEM101 (ENSCWAG00000020050) #11	LSM12 (ENSCWAG00000020061) #21	G6PC3 (ENSCWAG00000020070) #22	HDAC5 (ENSCWAG00000020122) #23	HROB (ENSCWAG00000020317) #25	ASB16 (ENSCWAG00000020342) #24	TMUB2 (ENSCWAG00000020370) #27	ENSCWAG00000020421	ATXN7L3 (ENSCWAG00000020425) #28	UBTF (ENSCWAG00000020441)	SLC4A1 (ENSCWAG00000020495) #30	RUNDC3A (ENSCWAG00000020568) #31	SLC25A39 (ENSCWAG00000020645)	GRN (ENSCWAG00000020728)	FAM171A2 (ENSCWAG00000004487)	ITGA2B (ENSCWAG00000004553)	GPATCH8 (ENSCWAG00000004689)	FZD2 (ENSCWAG00000004718)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Camelidae	ANCESTRAL SPECIES	62	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Alpaca	MODERN SPECIES	1432															LSM12 (ENSVPAG00000011145) #21	G6PC3 (ENSVPAG00000011146) #22
Arabian camel	MODERN SPECIES	7	ARL4D (ENSCDRG00005012487)	DHX8 (ENSCDRG00005012511)	ETV4 (ENSCDRG00005012629)	MEOX1 (ENSCDRG00005012880)	SOST (ENSCDRG00005012942)	DUSP3 (ENSCDRG00005013017)	CFAP97D1 (ENSCDRG00005013063)	MPP3 (ENSCDRG00005013136)	ENSCDRG00005013287	MPP2 (ENSCDRG00005013377) #14	PPY (ENSCDRG00005013534)	PYY (ENSCDRG00005013591)	NAGS (ENSCDRG00005013649) #12	TMEM101 (ENSCDRG00005013697) #11	LSM12 (ENSCDRG00005013762) #21	G6PC3 (ENSCDRG00005013821) #22	HDAC5 (ENSCDRG00005013881) #23	HROB (ENSCDRG00005014700) #25	ASB16 (ENSCDRG00005014991) #24	ENSCDRG00005015010	TMUB2 (ENSCDRG00005015028) #27	ENSCDRG00005015114	ATXN7L3 (ENSCDRG00005015133) #28	UBTF (ENSCDRG00005015228)	SLC4A1 (ENSCDRG00005015521) #30	RUNDC3A (ENSCDRG00005003384) #31	ENSCDRG00005003521	GRN (ENSCDRG00005003644)	FAM171A2 (ENSCDRG00005003750)	ITGA2B (ENSCDRG00005003803)	GPATCH8 (ENSCDRG00005003876)
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000156866.db.b.a.a.b	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT01000000221239	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000156866.db.b.a.a.b	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612.k	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT01000000221239	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Sperm whale	MODERN SPECIES	1192																G6PC3 (ENSPCTG00005016534) #22	HDAC5 (ENSPCTG00005016631) #23
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000156866.db.b.a.a.b	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612.k	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT01000000221239	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Dolphin	MODERN SPECIES	3033														TMEM101 (ENSTTRG00000010432) #11	LSM12 (ENSTTRG00000010433) #21	G6PC3 (ENSTTRG00000010434) #22	HDAC5 (ENSTTRG00000010455) #23	HROB (ENSTTRG00000010476) #25	ASB16 (ENSTTRG00000010483) #24	TMUB2 (ENSTTRG00000010490) #27	ATXN7L3 (ENSTTRG00000010493) #28	UBTF (ENSTTRG00000010500)	SLC4A1 (ENSTTRG00000010510) #30	RUNDC3A (ENSTTRG00000010512) #31	SLC25A39 (ENSTTRG00000010515)	GRN (ENSTTRG00000010517)	FAM171A2 (ENSTTRG00000010521)	ITGA2B (ENSTTRG00000010524)	GPATCH8 (ENSTTRG00000010527)	MEIOC (ENSTTRG00000010529)	CCDC43 (ENSTTRG00000010530) #10
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000156866.db.b.a.a.b	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612.k	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT01000000221239	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000156866.db.b.a.a.b	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612.k	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT01000000221239	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Beluga whale	MODERN SPECIES	26	DHX8 (ENSDLEG00000016383)	ETV4 (ENSDLEG00000016356)	ENSDLEG00000016347	MEOX1 (ENSDLEG00000016337)	SOST (ENSDLEG00000016330)	DUSP3 (ENSDLEG00000016319)	CUNH17orf105 (ENSDLEG00000016278)	MPP3 (ENSDLEG00000016159)	ENSDLEG00000016136	MPP2 (ENSDLEG00000016102) #14	PPY (ENSDLEG00000016086)	PYY (ENSDLEG00000016066)	NAGS (ENSDLEG00000016043) #12	TMEM101 (ENSDLEG00000016032) #11	LSM12 (ENSDLEG00000016019) #21	G6PC3 (ENSDLEG00000016010) #22	HDAC5 (ENSDLEG00000009250) #23	ENSDLEG00000008279	ASB16 (ENSDLEG00000008257) #24	TMUB2 (ENSDLEG00000008235) #27	ENSDLEG00000008216	ENSDLEG00000008200	ATXN7L3 (ENSDLEG00000008139) #28	UBTF (ENSDLEG00000008074)	SLC4A1 (ENSDLEG00000008025) #30	RUNDC3A (ENSDLEG00000007963) #31	SLC25A39 (ENSDLEG00000007915)	GRN (ENSDLEG00000007904)	FAM171A2 (ENSDLEG00000007900)	ITGA2B (ENSDLEG00000007305)	ENSDLEG00000007218
Narwhal	MODERN SPECIES	316	DHX8 (ENSMMNG00015020621)	ETV4 (ENSMMNG00015020665)	ENSMMNG00015020723	MEOX1 (ENSMMNG00015020733)	SOST (ENSMMNG00015020748)	ENSMMNG00015020758	CFAP97D1 (ENSMMNG00015020771)	MPP3 (ENSMMNG00015020807)	ENSMMNG00015020848	MPP2 (ENSMMNG00015020892) #14	PPY (ENSMMNG00015021001)	PYY (ENSMMNG00015021015)	NAGS (ENSMMNG00015021036) #12	TMEM101 (ENSMMNG00015021062) #11	LSM12 (ENSMMNG00015021082) #21	G6PC3 (ENSMMNG00015021101) #22	HDAC5 (ENSMMNG00015021170) #23	HROB (ENSMMNG00015021264) #25	ASB16 (ENSMMNG00015015957) #24	ENSMMNG00015015989	TMUB2 (ENSMMNG00015016008) #27	ENSMMNG00015016054	ENSMMNG00015016070	ATXN7L3 (ENSMMNG00015016090) #28	UBTF (ENSMMNG00015016136)	SLC4A1 (ENSMMNG00015016190) #30	RUNDC3A (ENSMMNG00015016333) #31	SLC25A39 (ENSMMNG00015016392)	GRN (ENSMMNG00015016450)	FAM171A2 (ENSMMNG00015016535)	ITGA2B (ENSMMNG00015016602)
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	5	ST8SIA3 (ENSPSNG00000004660)	WDR7 (ENSPSNG00000004704)	TXNL1 (ENSPSNG00000004744)	TCF4 (ENSPSNG00000005296)	ENSPSNG00000006776	ENSPSNG00000006882	CCDC68 (ENSPSNG00000006910)	RAB27B (ENSPSNG00000006964)	C18orf54 (ENSPSNG00000007061)	STARD6 (ENSPSNG00000007129)	POLI (ENSPSNG00000007184)	MBD2 (ENSPSNG00000007268)	DCC (ENSPSNG00000007423)	ENSPSNG00000007925	ENSPSNG00000007942	ENSPSNG00000007972 #22	MEX3C (ENSPSNG00000007985)	SMAD4 (ENSPSNG00000008007)	ELAC1 (ENSPSNG00000008066)	ME2 (ENSPSNG00000008129)	MRO (ENSPSNG00000008257)	ENSPSNG00000008320	SKA1 (ENSPSNG00000008361)	CXXC1 (ENSPSNG00000008435)	MBD1 (ENSPSNG00000008606)	CFAP53 (ENSPSNG00000008868)	MYO5B (ENSPSNG00000008965)	ENSPSNG00000009066	ACAA2 (ENSPSNG00000009112)	LIPG (ENSPSNG00000009216)	ENSPSNG00000009327
Vaquita	MODERN SPECIES	12	ARL4D (ENSPSNG00000014905)	DHX8 (ENSPSNG00000014988)	ETV4 (ENSPSNG00000015212)	MEOX1 (ENSPSNG00000015382)	SOST (ENSPSNG00000015469)	DUSP3 (ENSPSNG00000015510)	CFAP97D1 (ENSPSNG00000015557)	MPP3 (ENSPSNG00000015649)	ENSPSNG00000015895	MPP2 (ENSPSNG00000016041) #14	PPY (ENSPSNG00000016503)	PYY (ENSPSNG00000016591)	NAGS (ENSPSNG00000016666) #12	TMEM101 (ENSPSNG00000016748) #11	LSM12 (ENSPSNG00000016804) #21	ENSPSNG00000016837 #22	HDAC5 (ENSPSNG00000016878) #23	HROB (ENSPSNG00000017002) #25	ASB16 (ENSPSNG00000017068) #24	TMUB2 (ENSPSNG00000017167) #27	ENSPSNG00000017278	ENSPSNG00000017288	ATXN7L3 (ENSPSNG00000017319) #28	UBTF (ENSPSNG00000017372)	SLC4A1 (ENSPSNG00000017464) #30	RUNDC3A (ENSPSNG00000017833) #31	SLC25A39 (ENSPSNG00000017917)	GRN (ENSPSNG00000018015)	FAM171A2 (ENSPSNG00000018102)	ITGA2B (ENSPSNG00000018166)	GPATCH8 (ENSPSNG00000018428)
Blue whale	MODERN SPECIES	12	DHX8 (ENSBMSG00010014409)	ETV4 (ENSBMSG00010014497)	ENSBMSG00010014716	MEOX1 (ENSBMSG00010014731)	SOST (ENSBMSG00010014755)	DUSP3 (ENSBMSG00010014767)	CFAP97D1 (ENSBMSG00010014790)	MPP3 (ENSBMSG00010014837)	ENSBMSG00010014978	MPP2 (ENSBMSG00010015099) #14	PPY (ENSBMSG00010015219)	PYY (ENSBMSG00010015252)	NAGS (ENSBMSG00010015296) #12	TMEM101 (ENSBMSG00010015334) #11	LSM12 (ENSBMSG00010015353) #21	G6PC3 (ENSBMSG00010015371) #22	HDAC5 (ENSBMSG00010015411) #23	HROB (ENSBMSG00010015577) #25	ASB16 (ENSBMSG00010015714) #24	TMUB2 (ENSBMSG00010015740) #27	ENSBMSG00010015844	ENSBMSG00010015852	ATXN7L3 (ENSBMSG00010015865) #28	ENSBMSG00010015902	UBTF (ENSBMSG00010015923)	SLC4A1 (ENSBMSG00010015974) #30	RUNDC3A (ENSBMSG00010016158) #31	SLC25A39 (ENSBMSG00010016337)	GRN (ENSBMSG00010016403)	FAM171A2 (ENSBMSG00010016465)	ITGA2B (ENSBMSG00010016509)
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Yarkand deer	MODERN SPECIES	28	DHX8 (ENSCHYG00000015221)	ETV4 (ENSCHYG00000015469)	MEOX1 (ENSCHYG00000015982)	SOST (ENSCHYG00000016102)	DUSP3 (ENSCHYG00000016213)	CFAP97D1 (ENSCHYG00000016245)	MPP3 (ENSCHYG00000016304)	ENSCHYG00000016457	MPP2 (ENSCHYG00000000151) #14	PPY (ENSCHYG00000000311)	PYY (ENSCHYG00000000323)	ENSCHYG00000000337	NAGS (ENSCHYG00000000350) #12	TMEM101 (ENSCHYG00000000374) #11	LSM12 (ENSCHYG00000000389) #21	G6PC3 (ENSCHYG00000000446) #22	HDAC5 (ENSCHYG00000000510) #23	HROB (ENSCHYG00000000635) #25	ASB16 (ENSCHYG00000000667) #24	ENSCHYG00000000685	TMUB2 (ENSCHYG00000000706) #27	ENSCHYG00000000744	ATXN7L3 (ENSCHYG00000000756) #28	UBTF (ENSCHYG00000000814)	SLC4A1 (ENSCHYG00000000945) #30	RUNDC3A (ENSCHYG00000001002) #31	SLC25A39 (ENSCHYG00000001107)	GRN (ENSCHYG00000001189)	FAM171A2 (ENSCHYG00000001239)	ITGA2B (ENSCHYG00000001308)	GPATCH8 (ENSCHYG00000001558)
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000154818.a.b	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Goat	MODERN SPECIES	10	DHX8 (ENSCHIG00000009291)	ETV4 (ENSCHIG00000023037)	MEOX1 (ENSCHIG00000015761)	SOST (ENSCHIG00000019903)	DUSP3 (ENSCHIG00000023597)	CFAP97D1 (ENSCHIG00000018111)	MPP3 (ENSCHIG00000025989)	ENSCHIG00000015425	MPP2 (ENSCHIG00000025895) #14	PPY (ENSCHIG00000013650)	PYY (ENSCHIG00000025308)	ENSCHIG00000020001	NAGS (ENSCHIG00000007853) #12	TMEM101 (ENSCHIG00000022056) #11	LSM12 (ENSCHIG00000018175) #21	G6PC3 (ENSCHIG00000009637) #22	HDAC5 (ENSCHIG00000016811) #23	HROB (ENSCHIG00000009151) #25	ASB16 (ENSCHIG00000013508) #24	ENSCHIG00000025089	TMUB2 (ENSCHIG00000019662) #27	ENSCHIG00000011610	ATXN7L3 (ENSCHIG00000021414) #28	UBTF (ENSCHIG00000011621)	SLC4A1 (ENSCHIG00000009610) #30	RUNDC3A (ENSCHIG00000023707) #31	ENSCHIG00000014759	GRN (ENSCHIG00000026100)	FAM171A2 (ENSCHIG00000018936)	ITGA2B (ENSCHIG00000014389)	GPATCH8 (ENSCHIG00000008962)
Rambouillet Sheep	MODERN SPECIES	2	DHX8 (ENSOARG00020020274)	ETV4 (ENSOARG00020019959)	MEOX1 (ENSOARG00020019877)	SOST (ENSOARG00020019837)	DUSP3 (ENSOARG00020019786)	CFAP97D1 (ENSOARG00020019742)	MPP3 (ENSOARG00020019562)	ENSOARG00020019510	MPP2 (ENSOARG00020017849) #14	PPY (ENSOARG00020017734)	PYY (ENSOARG00020017685)	ENSOARG00020017666	NAGS (ENSOARG00020017634) #12	TMEM101 (ENSOARG00020017584) #11	LSM12 (ENSOARG00020017537) #21	G6PC3 (ENSOARG00020017501) #22	HDAC5 (ENSOARG00020016897) #23	HROB (ENSOARG00020016515) #25	ENSOARG00020016477	ASB16 (ENSOARG00020016404) #24	TMUB2 (ENSOARG00020016242) #27	ENSOARG00020016217	ATXN7L3 (ENSOARG00020016057) #28	UBTF (ENSOARG00020015878)	ENSOARG00020015824	SLC4A1 (ENSOARG00020011899) #30	RUNDC3A (ENSOARG00020011641) #31	SLC25A39 (ENSOARG00020011552)	GRN (ENSOARG00020011356)	FAM171A2 (ENSOARG00020011264)	GPATCH8 (ENSOARG00020010882)
Bovinae	ANCESTRAL SPECIES		ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Bos	ANCESTRAL SPECIES	1	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT01100000263481.n.b.a.a.a.a	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000154818.a.b	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Bos_b	ANCESTRAL SPECIES	21	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT01100000263481.n.b.a.a.a.a	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000154818.a.b	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Hybrid Bos Indicus	MODERN SPECIES	10	ETV4 (ENSBIXG00005004672)	MEOX1 (ENSBIXG00005004649)	SOST (ENSBIXG00005027057)	DUSP3 (ENSBIXG00005004645)	CFAP97D1 (ENSBIXG00005004637)	MPP3 (ENSBIXG00005006938)	ENSBIXG00005026948	ENSBIXG00005026894	MPP2 (ENSBIXG00005004589) #14	PPY (ENSBIXG00005026783)	PYY (ENSBIXG00005026762)	ENSBIXG00005026722	NAGS (ENSBIXG00005026706) #12	TMEM101 (ENSBIXG00005026667) #11	LSM12 (ENSBIXG00005026637) #21	G6PC3 (ENSBIXG00005004552) #22	HDAC5 (ENSBIXG00005026567) #23	HROB (ENSBIXG00005007091) #25	ASB16 (ENSBIXG00005026449) #24	ENSBIXG00005026431	TMUB2 (ENSBIXG00005026410) #27	ATXN7L3 (ENSBIXG00005004496) #28	UBTF (ENSBIXG00005026270)	ENSBIXG00005026113	SLC4A1 (ENSBIXG00005026079) #30	RUNDC3A (ENSBIXG00005006698) #31	SLC25A39 (ENSBIXG00005005566)	GRN (ENSBIXG00005025746)	FAM171A2 (ENSBIXG00005025663)	GPATCH8 (ENSBIXG00005025561)	FZD2 (ENSBIXG00005007736)
Cow	MODERN SPECIES	10	DHX8 (ENSBTAG00000008339)	ETV4 (ENSBTAG00000008333)	MEOX1 (ENSBTAG00000015751)	SOST (ENSBTAG00000053970)	DUSP3 (ENSBTAG00000003966)	CFAP97D1 (ENSBTAG00000045732)	MPP3 (ENSBTAG00000017536)	CD300LG (ENSBTAG00000007434)	MPP2 (ENSBTAG00000001279) #14	PPY (ENSBTAG00000002441)	PYY (ENSBTAG00000046022)	PYY2 (ENSBTAG00000045652)	NAGS (ENSBTAG00000016249) #12	TMEM101 (ENSBTAG00000016251) #11	LSM12 (ENSBTAG00000016252) #21	G6PC3 (ENSBTAG00000016253) #22	HDAC5 (ENSBTAG00000016254) #23	HROB (ENSBTAG00000004464) #25	ASB16 (ENSBTAG00000019658) #24	ENSBTAG00000055030	TMUB2 (ENSBTAG00000019660) #27	ATXN7L3 (ENSBTAG00000019662) #28	UBTF (ENSBTAG00000005067)	ENSBTAG00000050012	SLC4A1 (ENSBTAG00000001610) #30	RUNDC3A (ENSBTAG00000001615) #31	SLC25A39 (ENSBTAG00000019463)	GRN (ENSBTAG00000018823)	FAM171A2 (ENSBTAG00000011447)	ITGA2B (ENSBTAG00000008165)	GPATCH8 (ENSBTAG00000038316)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT01100000263481.n.b.a.a.a.a	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00740000117120	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263648	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000154818.a.b	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Domestic yak	MODERN SPECIES	10	ETV4 (ENSBGRG00000005239)	ENSBGRG00000005166	SOST (ENSBGRG00000005142)	ENSBGRG00000005117	CFAP97D1 (ENSBGRG00000005072)	MPP3 (ENSBGRG00000004948)	ENSBGRG00000004900	ENSBGRG00000004888	MPP2 (ENSBGRG00000004796) #14	PPY (ENSBGRG00000004755)	PYY (ENSBGRG00000004708)	ENSBGRG00000004666	NAGS (ENSBGRG00000004616) #12	TMEM101 (ENSBGRG00000004561) #11	LSM12 (ENSBGRG00000004524) #21	G6PC3 (ENSBGRG00000004485) #22	HDAC5 (ENSBGRG00000004281) #23	HROB (ENSBGRG00000004065) #25	ASB16 (ENSBGRG00000004029) #24	TMUB2 (ENSBGRG00000003977) #27	ENSBGRG00000003967	ENSBGRG00000003950	ATXN7L3 (ENSBGRG00000026114) #28	UBTF (ENSBGRG00000025857)	ENSBGRG00000025827	SLC4A1 (ENSBGRG00000025780) #30	RUNDC3A (ENSBGRG00000025692) #31	SLC25A39 (ENSBGRG00000025643)	GRN (ENSBGRG00000025528)	FAM171A2 (ENSBGRG00000025477)	ENSBGRG00000025473
Wild yak	MODERN SPECIES	2125	DHX8 (ENSBMUG00000018486)	ETV4 (ENSBMUG00000018545)	MEOX1 (ENSBMUG00000018701)	SOST (ENSBMUG00000018717)	ENSBMUG00000018730	CFAP97D1 (ENSBMUG00000018744)	MPP3 (ENSBMUG00000018771)	ENSBMUG00000018784	MPP2 (ENSBMUG00000018885) #14	PPY (ENSBMUG00000018903)	PYY (ENSBMUG00000018924)	ENSBMUG00000018946	NAGS (ENSBMUG00000018993) #12	TMEM101 (ENSBMUG00000019027) #11	LSM12 (ENSBMUG00000019045) #21	G6PC3 (ENSBMUG00000019058) #22	HDAC5 (ENSBMUG00000019271) #23	HROB (ENSBMUG00000019373) #25	ASB16 (ENSBMUG00000019408) #24	ENSBMUG00000019414	TMUB2 (ENSBMUG00000019436) #27	ENSBMUG00000019453	ATXN7L3 (ENSBMUG00000019462) #28	UBTF (ENSBMUG00000019670)	ENSBMUG00000019795	SLC4A1 (ENSBMUG00000019824) #30	RUNDC3A (ENSBMUG00000019857) #31	SLC25A39 (ENSBMUG00000019877)	GRN (ENSBMUG00000019905)	ENSBMUG00000019934	ITGA2B (ENSBMUG00000019963)
American bison	MODERN SPECIES	2659	DHX8 (ENSBBBG00000017567)	ETV4 (ENSBBBG00000017743)	MEOX1 (ENSBBBG00000017760)	SOST (ENSBBBG00000004381)	ENSBBBG00000017768	CFAP97D1 (ENSBBBG00000004383)	MPP3 (ENSBBBG00000018021)	ENSBBBG00000018062	MPP2 (ENSBBBG00000018127) #14	PPY (ENSBBBG00000018146)	ENSBBBG00000018160	ENSBBBG00000018164	NAGS (ENSBBBG00000007911) #12	TMEM101 (ENSBBBG00000007582) #11	LSM12 (ENSBBBG00000018252) #21	G6PC3 (ENSBBBG00000018272) #22	HDAC5 (ENSBBBG00000018438) #23	HROB (ENSBBBG00000018514) #25	ASB16 (ENSBBBG00000018526) #24	TMUB2 (ENSBBBG00000018551) #27	ENSBBBG00000009140	ATXN7L3 (ENSBBBG00000004595) #28	UBTF (ENSBBBG00000018711)	ENSBBBG00000018736	SLC4A1 (ENSBBBG00000004742) #30	RUNDC3A (ENSBBBG00000018912) #31	SLC25A39 (ENSBBBG00000018960)	GRN (ENSBBBG00000018992)	ENSBBBG00000004853	ITGA2B (ENSBBBG00000004877)	GPATCH8 (ENSBBBG00000004885)
Siberian musk deer	MODERN SPECIES	1210	ETV4 (ENSMMSG00000018371)	MEOX1 (ENSMMSG00000018483)	SOST (ENSMMSG00000018514)	DUSP3 (ENSMMSG00000018534)	CFAP97D1 (ENSMMSG00000018562)	MPP3 (ENSMMSG00000018598)	ENSMMSG00000018694	MPP2 (ENSMMSG00000018733) #14	PPY (ENSMMSG00000018955)	ENSMMSG00000018997	ENSMMSG00000019019	ENSMMSG00000019027	NAGS (ENSMMSG00000019050) #12	TMEM101 (ENSMMSG00000019103) #11	LSM12 (ENSMMSG00000019139) #21	G6PC3 (ENSMMSG00000019176) #22	HDAC5 (ENSMMSG00000019223) #23	HROB (ENSMMSG00000019509) #25	ASB16 (ENSMMSG00000019660) #24	ENSMMSG00000019683	TMUB2 (ENSMMSG00000019698) #27	ENSMMSG00000019733	ATXN7L3 (ENSMMSG00000019750) #28	UBTF (ENSMMSG00000019789)	SLC4A1 (ENSMMSG00000019989) #30	RUNDC3A (ENSMMSG00000020163) #31	SLC25A39 (ENSMMSG00000020215)	GRN (ENSMMSG00000020314)	FAM171A2 (ENSMMSG00000020378)	ITGA2B (ENSMMSG00000020406)	GPATCH8 (ENSMMSG00000020488)
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Equus	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Donkey	MODERN SPECIES	4	ARL4D (ENSEASG00005032170)	DHX8 (ENSEASG00005010097)	ETV4 (ENSEASG00005010106)	MEOX1 (ENSEASG00005010118)	SOST (ENSEASG00005010119)	DUSP3 (ENSEASG00005029543)	CFAP97D1 (ENSEASG00005010123)	MPP3 (ENSEASG00005010126)	CD300LG (ENSEASG00005036131)	MPP2 (ENSEASG00005010136) #14	PPY (ENSEASG00005010140)	PYY (ENSEASG00005010145)	NAGS (ENSEASG00005010150) #12	ENSEASG00005034853	LSM12 (ENSEASG00005028365) #21	G6PC3 (ENSEASG00005010158) #22	HDAC5 (ENSEASG00005010164) #23	HROB (ENSEASG00005034534) #25	ASB16 (ENSEASG00005010178) #24	ENSEASG00005010180	TMUB2 (ENSEASG00005032908) #27	ENSEASG00005010183	ATXN7L3 (ENSEASG00005010185) #28	UBTF (ENSEASG00005010191)	SLC4A1 (ENSEASG00005010202) #30	RUNDC3A (ENSEASG00005010214) #31	SLC25A39 (ENSEASG00005010219)	GRN (ENSEASG00005010225)	FAM171A2 (ENSEASG00005010235)	ITGA2B (ENSEASG00005010250)	GPATCH8 (ENSEASG00005010264)
Horse	MODERN SPECIES	2	ENSECAG00000044154	DHX8 (ENSECAG00000019601)	ETV4 (ENSECAG00000015611)	MEOX1 (ENSECAG00000013525)	DUSP3 (ENSECAG00000011911)	CFAP97D1 (ENSECAG00000046290)	MPP3 (ENSECAG00000019329)	CD300LG (ENSECAG00000019158)	MPP2 (ENSECAG00000016483) #14	PPY (ENSECAG00000034430)	PYY (ENSECAG00000015113)	TMEM101 (ENSECAG00000010148) #11	NAGS (ENSECAG00000013262) #12	ENSECAG00000053918	LSM12 (ENSECAG00000009071) #21	G6PC3 (ENSECAG00000024363) #22	HDAC5 (ENSECAG00000021398) #23	HROB (ENSECAG00000020919) #25	ENSECAG00000034132	ASB16 (ENSECAG00000044472) #24	TMUB2 (ENSECAG00000016704) #27	ATXN7L3 (ENSECAG00000007920) #28	UBTF (ENSECAG00000019162)	SLC4A1 (ENSECAG00000000527) #30	RUNDC3A (ENSECAG00000021953) #31	SLC25A39 (ENSECAG00000011004)	GRN (ENSECAG00000018046)	FAM171A2 (ENSECAG00000017264)	ITGA2B (ENSECAG00000019870)	GPATCH8 (ENSECAG00000040232)	ENSECAG00000049258
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Megabat	MODERN SPECIES	1717													NAGS (ENSPVAG00000013701) #12	TMEM101 (ENSPVAG00000013704) #11	LSM12 (ENSPVAG00000013706) #21	G6PC3 (ENSPVAG00000013708) #22	HDAC5 (ENSPVAG00000013712) #23	HROB (ENSPVAG00000013715) #25	ASB16 (ENSPVAG00000013718) #24	ATXN7L3 (ENSPVAG00000013721) #28	UBTF (ENSPVAG00000013724)
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812
Microbat	MODERN SPECIES	1037	ENSMLUG00000000090	ETV4 (ENSMLUG00000000091)	MEOX1 (ENSMLUG00000000092)	SOST (ENSMLUG00000005971)	ENSMLUG00000005965	CFAP97D1 (ENSMLUG00000005961)	MPP3 (ENSMLUG00000003234)	CD300LG (ENSMLUG00000003240)	MPP2 (ENSMLUG00000013620) #14	ENSMLUG00000022525	ENSMLUG00000029554	ENSMLUG00000023951	NAGS (ENSMLUG00000006381) #12	TMEM101 (ENSMLUG00000006387) #11	LSM12 (ENSMLUG00000006391) #21	G6PC3 (ENSMLUG00000006396) #22	HDAC5 (ENSMLUG00000006398) #23	HROB (ENSMLUG00000006408) #25	ASB16 (ENSMLUG00000003922) #24	TMUB2 (ENSMLUG00000006414) #27	ENSMLUG00000006416 #28	UBTF (ENSMLUG00000001898)	SLC4A1 (ENSMLUG00000001909) #30	RUNDC3A (ENSMLUG00000001923) #31	SLC25A39 (ENSMLUG00000001925)	GRN (ENSMLUG00000001930)	ENSMLUG00000017517	GPATCH8 (ENSMLUG00000013840)
Greater horseshoe bat	MODERN SPECIES	13	ENSRFEG00010014072	DHX8 (ENSRFEG00010014130)	ETV4 (ENSRFEG00010014233)	MEOX1 (ENSRFEG00010014385)	SOST (ENSRFEG00010014460)	DUSP3 (ENSRFEG00010014502)	CFAP97D1 (ENSRFEG00010014556)	MPP3 (ENSRFEG00010014655)	ENSRFEG00010014984	MPP2 (ENSRFEG00010015087) #14	PPY (ENSRFEG00010015416)	PYY (ENSRFEG00010015515)	NAGS (ENSRFEG00010015597) #12	TMEM101 (ENSRFEG00010015651) #11	LSM12 (ENSRFEG00010015694) #21	G6PC3 (ENSRFEG00010015731) #22	HDAC5 (ENSRFEG00010015791) #23	HROB (ENSRFEG00010015949) #25	ASB16 (ENSRFEG00010016059) #24	TMUB2 (ENSRFEG00010016109) #27	ENSRFEG00010005404	ATXN7L3 (ENSRFEG00010005424) #28	UBTF (ENSRFEG00010005522)	SLC4A1 (ENSRFEG00010005619) #30	RUNDC3A (ENSRFEG00010005687) #31	SLC25A39 (ENSRFEG00010005758)	GRN (ENSRFEG00010005845)	FAM171A2 (ENSRFEG00010005890)	ITGA2B (ENSRFEG00010005936)	GPATCH8 (ENSRFEG00010005972)	FZD2 (ENSRFEG00010006008)
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Panthera	ANCESTRAL SPECIES	45	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Panthera_a	ANCESTRAL SPECIES	52	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00910000147826	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
leopard	MODERN SPECIES	170	DHX8 (ENSPPRG00000003753)	ETV4 (ENSPPRG00000002463)	MEOX1 (ENSPPRG00000007933)	SOST (ENSPPRG00000007226)	DUSP3 (ENSPPRG00000007027)	CFAP97D1 (ENSPPRG00000006858)	ENSPPRG00000006511	MPP3 (ENSPPRG00000006465)	CD300LG (ENSPPRG00000005093)	MPP2 (ENSPPRG00000002782) #14	PPY (ENSPPRG00000000124)	PYY (ENSPPRG00000022776)	NAGS (ENSPPRG00000023010) #12	TMEM101 (ENSPPRG00000023116) #11	LSM12 (ENSPPRG00000023420) #21	G6PC3 (ENSPPRG00000023704) #22	HDAC5 (ENSPPRG00000023870) #23	HROB (ENSPPRG00000024670) #25	ASB16 (ENSPPRG00000017033) #24	ENSPPRG00000016276	TMUB2 (ENSPPRG00000015481) #27	ENSPPRG00000014352	ATXN7L3 (ENSPPRG00000011041) #28	UBTF (ENSPPRG00000010657)	SLC4A1 (ENSPPRG00000007676) #30	RUNDC3A (ENSPPRG00000005522) #31	SLC25A39 (ENSPPRG00000004635)	GRN (ENSPPRG00000003421)	ENSPPRG00000000765	ITGA2B (ENSPPRG00000000366)	GPATCH8 (ENSPPRG00000023310)
lion	MODERN SPECIES	14	ARL4D (ENSPLOG00000008959)	DHX8 (ENSPLOG00000008992)	ETV4 (ENSPLOG00000009101)	MEOX1 (ENSPLOG00000009348)	SOST (ENSPLOG00000009394)	DUSP3 (ENSPLOG00000009423)	CFAP97D1 (ENSPLOG00000009455)	MPP3 (ENSPLOG00000009550)	CD300LG (ENSPLOG00000009677)	MPP2 (ENSPLOG00000009934) #14	PPY (ENSPLOG00000010191)	PYY (ENSPLOG00000010219)	NAGS (ENSPLOG00000010273) #12	TMEM101 (ENSPLOG00000010471) #11	LSM12 (ENSPLOG00000010523) #21	G6PC3 (ENSPLOG00000010555) #22	HDAC5 (ENSPLOG00000010760) #23	HROB (ENSPLOG00000012234) #25	ASB16 (ENSPLOG00000012314) #24	ENSPLOG00000012362	TMUB2 (ENSPLOG00000012380) #27	ENSPLOG00000012457	ATXN7L3 (ENSPLOG00000012486) #28	ENSPLOG00000012609	UBTF (ENSPLOG00000012654)	SLC4A1 (ENSPLOG00000012747) #30	RUNDC3A (ENSPLOG00000012839) #31	SLC25A39 (ENSPLOG00000012918)	GRN (ENSPLOG00000013068)	FAM171A2 (ENSPLOG00000013171)	ITGA2B (ENSPLOG00000013317)
Tiger	MODERN SPECIES	442				ARL4D (ENSPTIG00000010084)	DHX8 (ENSPTIG00000008944)	ETV4 (ENSPTIG00000009260)	MEOX1 (ENSPTIG00000009878)	DUSP3 (ENSPTIG00000010048)	CFAP97D1 (ENSPTIG00000010210)	MPP3 (ENSPTIG00000010301)	CD300LG (ENSPTIG00000010764)	MPP2 (ENSPTIG00000011274) #14	PPY (ENSPTIG00000012196)	TMEM101 (ENSPTIG00000012414) #11	LSM12 (ENSPTIG00000012704) #21	G6PC3 (ENSPTIG00000012868) #22	HDAC5 (ENSPTIG00000013036) #23	HROB (ENSPTIG00000014341) #25	TMUB2 (ENSPTIG00000014721) #27	ATXN7L3 (ENSPTIG00000015740) #28	UBTF (ENSPTIG00000016361)	SLC4A1 (ENSPTIG00000017662) #30	ENSPTIG00000018246 #31	SLC25A39 (ENSPTIG00000018444)	GRN (ENSPTIG00000018975)	ENSPTIG00000019379	ITGA2B (ENSPTIG00000019437)	GPATCH8 (ENSPTIG00000020001)	ENSPTIG00000020465	FZD2 (ENSPTIG00000000057)	MEIOC (ENSPTIG00000020634)
Cat	MODERN SPECIES	245	ENSFCAG00000009907	DHX8 (ENSFCAG00000009908)	ETV4 (ENSFCAG00000009909)	MEOX1 (ENSFCAG00000009910)	SOST (ENSFCAG00000044610)	DUSP3 (ENSFCAG00000042423)	CFAP97D1 (ENSFCAG00000031865)	MPP3 (ENSFCAG00000009913)	CD300LG (ENSFCAG00000040975)	MPP2 (ENSFCAG00000009673) #14	PPY (ENSFCAG00000022312)	PYY (ENSFCAG00000039255)	TMEM101 (ENSFCAG00000033994) #11	NAGS (ENSFCAG00000023321) #12	LSM12 (ENSFCAG00000037021) #21	G6PC3 (ENSFCAG00000002198) #22	HDAC5 (ENSFCAG00000002199) #23	CE1H17orf53 (ENSFCAG00000008021) #25	ASB16 (ENSFCAG00000008024) #24	ENSFCAG00000046656	TMUB2 (ENSFCAG00000036486) #27	ENSFCAG00000051466	ATXN7L3 (ENSFCAG00000008027) #28	UBTF (ENSFCAG00000003050)	SLC4A1 (ENSFCAG00000003051) #30	RUNDC3A (ENSFCAG00000003052) #31	SLC25A39 (ENSFCAG00000024697)	GRN (ENSFCAG00000019312)	FAM171A2 (ENSFCAG00000046346)	ITGA2B (ENSFCAG00000003056)	GPATCH8 (ENSFCAG00000043334)
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142.l	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142.l	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00560000077692	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Dog	MODERN SPECIES	37	DHX8 (ENSCAFG00845010932)	ETV4 (ENSCAFG00845010762)	MEOX1 (ENSCAFG00845010666)	ENSCAFG00845010634	SOST (ENSCAFG00845010604)	DUSP3 (ENSCAFG00845010587)	CFAP97D1 (ENSCAFG00845010537)	MPP3 (ENSCAFG00845010353)	CD300LG (ENSCAFG00845010201)	MPP2 (ENSCAFG00845009989) #14	PPY (ENSCAFG00845009906)	PYY (ENSCAFG00845009862)	NAGS (ENSCAFG00845009803) #12	TMEM101 (ENSCAFG00845009766) #11	LSM12 (ENSCAFG00845009725) #21	G6PC3 (ENSCAFG00845009701) #22	HDAC5 (ENSCAFG00845009404) #23	HROB (ENSCAFG00845009214) #25	ENSCAFG00845009181	ASB16 (ENSCAFG00845009148) #24	TMUB2 (ENSCAFG00845009090) #27	ATXN7L3 (ENSCAFG00845009030) #28	UBTF (ENSCAFG00845008774)	SLC4A1 (ENSCAFG00845008600) #30	RUNDC3A (ENSCAFG00845008505) #31	SLC25A39 (ENSCAFG00845008385)	GRN (ENSCAFG00845008267)	FAM171A2 (ENSCAFG00845008184)	ITGA2B (ENSCAFG00845007943)	GPATCH8 (ENSCAFG00845007843)	FZD2 (ENSCAFG00845007799)
Dingo	MODERN SPECIES	150	ARL4D (ENSCAFG00020012929)	DHX8 (ENSCAFG00020012922)	ETV4 (ENSCAFG00020012919)	MEOX1 (ENSCAFG00020012917)	SOST (ENSCAFG00020012913)	DUSP3 (ENSCAFG00020012912)	CFAP97D1 (ENSCAFG00020012908)	MPP3 (ENSCAFG00020012239)	CD300LG (ENSCAFG00020012216)	MPP2 (ENSCAFG00020012201) #14	PPY (ENSCAFG00020012195)	PYY (ENSCAFG00020012190)	NAGS (ENSCAFG00020012187) #12	TMEM101 (ENSCAFG00020012178) #11	LSM12 (ENSCAFG00020012173) #21	G6PC3 (ENSCAFG00020012171) #22	HDAC5 (ENSCAFG00020011016) #23	HROB (ENSCAFG00020010866) #25	ENSCAFG00020010856	ASB16 (ENSCAFG00020010827) #24	TMUB2 (ENSCAFG00020010821) #27	ENSCAFG00020010817	ATXN7L3 (ENSCAFG00020010810) #28	UBTF (ENSCAFG00020010804)	SLC4A1 (ENSCAFG00020010718) #30	RUNDC3A (ENSCAFG00020010670) #31	SLC25A39 (ENSCAFG00020010666)	GRN (ENSCAFG00020010662)	FAM171A2 (ENSCAFG00020010653)	ITGA2B (ENSCAFG00020009900)	GPATCH8 (ENSCAFG00020009830)
Red fox	MODERN SPECIES	237	ENSVVUG00000017401	DHX8 (ENSVVUG00000017409)	ETV4 (ENSVVUG00000017428)	MEOX1 (ENSVVUG00000017472)	SOST (ENSVVUG00000017483)	ENSVVUG00000017486	CFAP97D1 (ENSVVUG00000017491)	MPP3 (ENSVVUG00000017506)	CD300LG (ENSVVUG00000017537)	MPP2 (ENSVVUG00000017546) #14	PPY (ENSVVUG00000017565)	PYY (ENSVVUG00000017566)	NAGS (ENSVVUG00000017572) #12	TMEM101 (ENSVVUG00000017580) #11	LSM12 (ENSVVUG00000017581) #21	G6PC3 (ENSVVUG00000017585) #22	HDAC5 (ENSVVUG00000017591) #23	HROB (ENSVVUG00000017609) #25	TMUB2 (ENSVVUG00000017618) #27	ENSVVUG00000017621	ATXN7L3 (ENSVVUG00000017632) #28	UBTF (ENSVVUG00000017636)	SLC4A1 (ENSVVUG00000017647) #30	RUNDC3A (ENSVVUG00000017662) #31	ENSVVUG00000017685	GRN (ENSVVUG00000017755)	FAM171A2 (ENSVVUG00000017759)	ITGA2B (ENSVVUG00000017776)	GPATCH8 (ENSVVUG00000017996)	FZD2 (ENSVVUG00000018007)	MEIOC (ENSVVUG00000018011)
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523
Ferret	MODERN SPECIES	336	NBR1 (ENSMPUG00000009782)	TMEM106A (ENSMPUG00000009731)	ARL4D (ENSMPUG00000019051)	DHX8 (ENSMPUG00000009717)	ETV4 (ENSMPUG00000009691)	MEOX1 (ENSMPUG00000009670)	SOST (ENSMPUG00000009665)	ENSMPUG00000009658	CFAP97D1 (ENSMPUG00000009655)	MPP3 (ENSMPUG00000009635)	CD300LG (ENSMPUG00000009628)	MPP2 (ENSMPUG00000009615) #14	PPY (ENSMPUG00000009603)	PYY (ENSMPUG00000009560)	NAGS (ENSMPUG00000009553) #12	G6PC3 (ENSMPUG00000009547) #22	HDAC5 (ENSMPUG00000009528) #23	TMEM101 (ENSMPUG00000009518) #11	HROB (ENSMPUG00000009503) #25	ASB16 (ENSMPUG00000009497) #24	TMUB2 (ENSMPUG00000009492) #27	ATXN7L3 (ENSMPUG00000009478) #28	UBTF (ENSMPUG00000009456)	SLC4A1 (ENSMPUG00000009443) #30	ENSMPUG00000009440	RUNDC3A (ENSMPUG00000009430) #31	SLC25A39 (ENSMPUG00000009416)	GRN (ENSMPUG00000009310)	FAM171A2 (ENSMPUG00000009301)	ITGA2B (ENSMPUG00000009285)	GPATCH8 (ENSMPUG00000009274)
American mink	MODERN SPECIES	396	ARL4D (ENSNVIG00000021159)	DHX8 (ENSNVIG00000021176)	ETV4 (ENSNVIG00000021269)	MEOX1 (ENSNVIG00000021400)	SOST (ENSNVIG00000021438)	DUSP3 (ENSNVIG00000021460)	CFAP97D1 (ENSNVIG00000021485)	MPP3 (ENSNVIG00000021515)	CD300LG (ENSNVIG00000021617)	MPP2 (ENSNVIG00000021839) #14	PPY (ENSNVIG00000022222)	PYY (ENSNVIG00000022274)	NAGS (ENSNVIG00000022308) #12	TMEM101 (ENSNVIG00000022356) #11	LSM12 (ENSNVIG00000022380) #21	G6PC3 (ENSNVIG00000022400) #22	HDAC5 (ENSNVIG00000022414) #23	HROB (ENSNVIG00000022483) #25	ASB16 (ENSNVIG00000022492) #24	ENSNVIG00000022504	TMUB2 (ENSNVIG00000022507) #27	ENSNVIG00000022520	ATXN7L3 (ENSNVIG00000022521) #28	UBTF (ENSNVIG00000022534)	SLC4A1 (ENSNVIG00000022705) #30	RUNDC3A (ENSNVIG00000022724) #31	SLC25A39 (ENSNVIG00000022776)	GRN (ENSNVIG00000022820)	FAM171A2 (ENSNVIG00000022846)	ITGA2B (ENSNVIG00000022856)	GPATCH8 (ENSNVIG00000022871)
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429.a	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534.o #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Giant Panda	MODERN SPECIES	4	ARL4D (ENSAMEG00000019914)	DHX8 (ENSAMEG00000018294)	ETV4 (ENSAMEG00000018297)	MEOX1 (ENSAMEG00000018301)	SOST (ENSAMEG00000027929)	DUSP3 (ENSAMEG00000018304)	CFAP97D1 (ENSAMEG00000018306)	MPP3 (ENSAMEG00000018308)	ENSAMEG00000025677	ENSAMEG00000030459 #14	PPY (ENSAMEG00000018317)	PYY (ENSAMEG00000030147)	NAGS (ENSAMEG00000018300) #12	TMEM101 (ENSAMEG00000018319) #11	LSM12 (ENSAMEG00000018321) #21	G6PC3 (ENSAMEG00000030902) #22	HDAC5 (ENSAMEG00000018326) #23	HROB (ENSAMEG00000018334) #25	ASB16 (ENSAMEG00000026171) #24	ENSAMEG00000025035	TMUB2 (ENSAMEG00000018340) #27	ENSAMEG00000023524	ATXN7L3 (ENSAMEG00000018341) #28	UBTF (ENSAMEG00000018342)	SLC4A1 (ENSAMEG00000018346) #30	RUNDC3A (ENSAMEG00000018352) #31	SLC25A39 (ENSAMEG00000018356)	GRN (ENSAMEG00000018358)	FAM171A2 (ENSAMEG00000018361)	ITGA2B (ENSAMEG00000018363)	GPATCH8 (ENSAMEG00000018376)
Ursus	ANCESTRAL SPECIES	2				ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000162682.B	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429.a	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534.o #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00560000077692	ENSGT00390000014069.b #27	ENSGT01100000263787	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00960000190528	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724
Polar bear	MODERN SPECIES	185					ARL4D (ENSUMAG00000012795)	DHX8 (ENSUMAG00000012797)	MEOX1 (ENSUMAG00000012807)	ENSUMAG00000012817	CFAP97D1 (ENSUMAG00000012821)	MPP3 (ENSUMAG00000012838)	ENSUMAG00000012954	MPP2 (ENSUMAG00000012961) #14	PPY (ENSUMAG00000012971)	TMEM101 (ENSUMAG00000012979) #11	LSM12 (ENSUMAG00000012987) #21	G6PC3 (ENSUMAG00000012993) #22	HDAC5 (ENSUMAG00000013017) #23	HROB (ENSUMAG00000013161) #25	ENSUMAG00000013163 #24	TMUB2 (ENSUMAG00000013167) #27	ENSUMAG00000013176	ATXN7L3 (ENSUMAG00000013180) #28	UBTF (ENSUMAG00000013247)	SLC4A1 (ENSUMAG00000013772) #30	ENSUMAG00000013780 #31	ENSUMAG00000013788	SLC25A39 (ENSUMAG00000013795)	GRN (ENSUMAG00000013835)	ENSUMAG00000013861	ITGA2B (ENSUMAG00000013871)	GPATCH8 (ENSUMAG00000013891)
American black bear	MODERN SPECIES	3740												PPY (ENSUAMG00000006301)	ENSUAMG00000006306 #11	NAGS (ENSUAMG00000006309) #12	LSM12 (ENSUAMG00000006313) #21	ENSUAMG00000006315 #22
Eulipotyphla	ANCESTRAL SPECIES	1729																ENSGT00950000183150.b #22	ENSGT00940000160534 #23
Hedgehog	MODERN SPECIES	3874																G6PC3 (ENSEEUG00000005158) #22	HDAC5 (ENSEEUG00000005211) #23
Common shrew	MODERN SPECIES	4182																G6PC3 (ENSSARG00000000436) #22
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Xenarthra	ANCESTRAL SPECIES	146											ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00390000003267	ENSGT00390000015009 #10
Armadillo	MODERN SPECIES	846											PPY (ENSDNOG00000015786)	PYY (ENSDNOG00000043444)	NAGS (ENSDNOG00000041289) #12	TMEM101 (ENSDNOG00000002415) #11	LSM12 (ENSDNOG00000002418) #21	G6PC3 (ENSDNOG00000035329) #22	HDAC5 (ENSDNOG00000038658) #23	HROB (ENSDNOG00000036215) #25	ASB16 (ENSDNOG00000015509) #24	TMUB2 (ENSDNOG00000049261) #27	ATXN7L3 (ENSDNOG00000003379) #28	UBTF (ENSDNOG00000000240)	SLC4A1 (ENSDNOG00000004568) #30	RUNDC3A (ENSDNOG00000049702) #31	ENSDNOG00000008556	GRN (ENSDNOG00000008510)	FAM171A2 (ENSDNOG00000038132)	ITGA2B (ENSDNOG00000008105)	GPATCH8 (ENSDNOG00000005102)	MEIOC (ENSDNOG00000012465)	CCDC43 (ENSDNOG00000039513) #10
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000161341.b	ENSGT00940000155510	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163690	ENSGT00390000018148	ENSGT00940000157190	ENSGT00940000162429	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Elephant	MODERN SPECIES	310	ARL4D (ENSLAFG00000002606)	DHX8 (ENSLAFG00000022159)	ETV4 (ENSLAFG00000014615)	MEOX1 (ENSLAFG00000003050)	SOST (ENSLAFG00000029742)	ENSLAFG00000016354	CFAP97D1 (ENSLAFG00000028578)	MPP3 (ENSLAFG00000016361)	CD300LG (ENSLAFG00000016371)	MPP2 (ENSLAFG00000013993) #14	PPY (ENSLAFG00000026837)	PYY (ENSLAFG00000028771)	NAGS (ENSLAFG00000021359) #12	TMEM101 (ENSLAFG00000018692) #11	LSM12 (ENSLAFG00000005202) #21	G6PC3 (ENSLAFG00000005204) #22	HDAC5 (ENSLAFG00000030796) #23	HROB (ENSLAFG00000005213) #25	ASB16 (ENSLAFG00000002645) #24	TMUB2 (ENSLAFG00000009290) #27	ATXN7L3 (ENSLAFG00000025945) #28	UBTF (ENSLAFG00000026225)	SLC4A1 (ENSLAFG00000007028) #30	RUNDC3A (ENSLAFG00000006978) #31	SLC25A39 (ENSLAFG00000030329)	GRN (ENSLAFG00000022437)	FAM171A2 (ENSLAFG00000022738)	ITGA2B (ENSLAFG00000004271)	GPATCH8 (ENSLAFG00000032250)	FZD2 (ENSLAFG00000009200)	MEIOC (ENSLAFG00000017916)
Tenrec	MODERN SPECIES	5221													NAGS (ENSETEG00000008364) #12	TMEM101 (ENSETEG00000008372) #11	ENSETEG00000008374 #21	G6PC3 (ENSETEG00000008376) #22
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000111487	ENSGT00940000156584 #17	ENSGT00390000014943	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00730000111487	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00390000014943	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00940000162259	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00390000014943	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000162259	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00390000014943	ENSGT00940000155348.B #14	ENSGT00530000064295	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00470000042293.a.b	ENSGT00950000183184.b	ENSGT00940000160724	ENSGT00940000159523	ENSGT00940000161812	ENSGT00390000003267
Common wonbat	MODERN SPECIES	1037	FAM117A (ENSVURG00010007908)	KAT7 (ENSVURG00010007939)	ENSVURG00010007979	DLX4 (ENSVURG00010008009)	DLX3 (ENSVURG00010008014)	ITGA3 (ENSVURG00010008033)	PDK2 (ENSVURG00010008089)	SAMD14 (ENSVURG00010008102)	PPP1R9B (ENSVURG00010008112) #19	SGCA (ENSVURG00010008123) #18	COL1A1 (ENSVURG00010008141) #17	MPP2 (ENSVURG00010008156) #14	NAGS (ENSVURG00010008226) #12	TMEM101 (ENSVURG00010008234) #11	LSM12 (ENSVURG00010008238) #21	G6PC3 (ENSVURG00010008245) #22	HDAC5 (ENSVURG00010008262) #23	HROB (ENSVURG00010008307) #25	ASB16 (ENSVURG00010008324) #24	TMUB2 (ENSVURG00010008334) #27	ATXN7L3 (ENSVURG00010008352) #28	UBTF (ENSVURG00010008379)	ENSVURG00010008476 #30	RUNDC3A (ENSVURG00010008488) #31	SLC25A39 (ENSVURG00010008543)	GRN (ENSVURG00010008581)	FAM171A2 (ENSVURG00010008592)	ITGA2B (ENSVURG00010008609)	GPATCH8 (ENSVURG00010008640)	FZD2 (ENSVURG00010008647)	MEIOC (ENSVURG00010008651)
koala	MODERN SPECIES	67	DLX3 (ENSPCIG00000029166)	ITGA3 (ENSPCIG00000029165)	PDK2 (ENSPCIG00000029164)	SAMD14 (ENSPCIG00000029163)	PPP1R9B (ENSPCIG00000029162) #19	SGCA (ENSPCIG00000029161) #18	COL1A1 (ENSPCIG00000029160) #17	ENSPCIG00000020256	MPP2 (ENSPCIG00000020252) #14	ENSPCIG00000002999	ENSPCIG00000031169	ENSPCIG00000020248	NAGS (ENSPCIG00000020247) #12	TMEM101 (ENSPCIG00000020245) #11	LSM12 (ENSPCIG00000020244) #21	G6PC3 (ENSPCIG00000020242) #22	HDAC5 (ENSPCIG00000020235) #23	ENSPCIG00000020233 #25	ASB16 (ENSPCIG00000020231) #24	TMUB2 (ENSPCIG00000031942) #27	ATXN7L3 (ENSPCIG00000020227) #28	UBTF (ENSPCIG00000020223)	SLC4A1 (ENSPCIG00000020217) #30	RUNDC3A (ENSPCIG00000020215) #31	ENSPCIG00000020210	GRN (ENSPCIG00000020198)	FAM171A2 (ENSPCIG00000020192)	ITGA2B (ENSPCIG00000019974)	GPATCH8 (ENSPCIG00000019927)	FZD2 (ENSPCIG00000002347)	MEIOC (ENSPCIG00000017058)
Wallaby	MODERN SPECIES	6561															ENSMEUG00000007501 #21	G6PC3 (ENSMEUG00000007510) #22
Tasmanian devil	MODERN SPECIES	3	DLX3 (ENSSHAG00000012177)	ITGA3 (ENSSHAG00000012691)	PDK2 (ENSSHAG00000012889)	PPP1R9B (ENSSHAG00000029473) #19	SAMD14 (ENSSHAG00000021640)	ENSSHAG00000026226	SGCA (ENSSHAG00000013308) #18	COL1A1 (ENSSHAG00000013444) #17	ENSSHAG00000014013	ENSSHAG00000026253 #14	ENSSHAG00000021813	ENSSHAG00000025840	ENSSHAG00000030220	NAGS (ENSSHAG00000014836) #12	ENSSHAG00000022394 #11	G6PC3 (ENSSHAG00000015015) #22	HDAC5 (ENSSHAG00000015058) #23	ENSSHAG00000015264 #25	TMUB2 (ENSSHAG00000030885) #27	ATXN7L3 (ENSSHAG00000015384) #28	UBTF (ENSSHAG00000015423)	SLC4A1 (ENSSHAG00000015590) #30	RUNDC3A (ENSSHAG00000015791) #31	SLC25A39 (ENSSHAG00000015836)	GRN (ENSSHAG00000016020)	FAM171A2 (ENSSHAG00000023392)	ITGA2B (ENSSHAG00000016072)	GPATCH8 (ENSSHAG00000028651)	FZD2 (ENSSHAG00000020649)	MEIOC (ENSSHAG00000005550)	CCDC43 (ENSSHAG00000005898) #10
Opossum	MODERN SPECIES	1	DLX3 (ENSMODG00000012098)	ITGA3 (ENSMODG00000012090)	PDK2 (ENSMODG00000012026)	SAMD14 (ENSMODG00000024070)	PPP1R9B (ENSMODG00000012010) #19	ENSMODG00000037352	SGCA (ENSMODG00000011969) #18	ENSMODG00000043992	COL1A1 (ENSMODG00000011945) #17	ENSMODG00000011871	MPP2 (ENSMODG00000011864) #14	ENSMODG00000011848	NAGS (ENSMODG00000011832) #12	TMEM101 (ENSMODG00000043632) #11	LSM12 (ENSMODG00000011809) #21	G6PC3 (ENSMODG00000011804) #22	HDAC5 (ENSMODG00000011751) #23	ENSMODG00000011789 #25	ASB16 (ENSMODG00000011774) #24	TMUB2 (ENSMODG00000011763) #27	ATXN7L3 (ENSMODG00000024058) #28	UBTF (ENSMODG00000024054)	SLC4A1 (ENSMODG00000011613) #30	RUNDC3A (ENSMODG00000011591) #31	SLC25A39 (ENSMODG00000011561)	GRN (ENSMODG00000011543)	FAM171A2 (ENSMODG00000011529)	ITGA2B (ENSMODG00000011516)	GPATCH8 (ENSMODG00000011442)	ENSMODG00000036709	FZD2 (ENSMODG00000011428)
Platypus	MODERN SPECIES	2	FAM117A (ENSOANG00000051323)	KAT7 (ENSOANG00000044742)	ENSOANG00000036467	DLX3 (ENSOANG00000041076)	ITGA3 (ENSOANG00000000624)	PDK2 (ENSOANG00000039603)	SAMD14 (ENSOANG00000013429)	PPP1R9B (ENSOANG00000009521) #19	SGCA (ENSOANG00000009519) #18	COL1A1 (ENSOANG00000001736) #17	ENSOANG00000040238 #15	MPP2 (ENSOANG00000045593) #14	ENSOANG00000020867	TMEM101 (ENSOANG00000043785) #11	LSM12 (ENSOANG00000046842) #21	ENSOANG00000037512 #22	ENSOANG00000039130 #23	HDAC5 (ENSOANG00000044276) #23	ENSOANG00000040577 #28	ENSOANG00000040478 #25	ENSOANG00000050570 #27	UBTF (ENSOANG00000039404)	SLC4A1 (ENSOANG00000002629) #30	ENSOANG00000043833	ENSOANG00000036380 #31	ENSOANG00000004584	FAM171A2 (ENSOANG00000043179)	ITGA2B (ENSOANG00000045365)	GPATCH8 (ENSOANG00000040999)	FZD2 (ENSOANG00000004982)	MEIOC (ENSOANG00000009537)
Sauria	ANCESTRAL SPECIES	26	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C
Lepidosauria	ANCESTRAL SPECIES	23	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00730000113862	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000169006	ENSGT00960000190099	ENSGT00390000018148	ENSGT00940000157190	ENSGT01080000257365.b.a.a.b.b	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00390000013997	ENSGT00940000156559	ENSGT00940000164841	ENSGT00390000000221.B	ENSGT00940000163066	ENSGT00440000033408.b	ENSGT00390000014175	ENSGT00950000183492	ENSGT00940000154775.c.a	ENSGT00940000160569	ENSGT00950000183205.b.a.b.a.a	ENSGT00940000160972	ENSGT00440000037417.B	ENSGT00940000158268.b
Laterata	ANCESTRAL SPECIES	11	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000169006	ENSGT00960000190099	ENSGT00940000157190	ENSGT01080000257365.b.a.a.b.b	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00390000013997	ENSGT00940000156559	ENSGT00940000164841	ENSGT00390000000221.B	ENSGT00940000163066	ENSGT00440000033408.b	ENSGT00390000014175	ENSGT00950000183492	ENSGT00940000154775.c.a	ENSGT00940000160569	ENSGT00950000183205.b.a.b.a.a	ENSGT00940000160972	ENSGT00440000037417.B	ENSGT00940000158268.b
Common wall lizard	MODERN SPECIES	4	MPP2 (ENSPMRG00000012561) #14	ENSPMRG00000012541	ENSPMRG00000012538	ENSPMRG00000012534	TMEM101 (ENSPMRG00000012512) #11	ETV4 (ENSPMRG00000012491)	MEOX1 (ENSPMRG00000012481)	SOST (ENSPMRG00000012473)	DUSP3 (ENSPMRG00000012469)	ENSPMRG00000012453	ENSPMRG00000012445	MPP3 (ENSPMRG00000012424)	ENSPMRG00000012411	ENSPMRG00000012407	LSM12 (ENSPMRG00000012401) #21	G6PC3 (ENSPMRG00000012394) #22	HDAC5 (ENSPMRG00000011294) #23	CCDC47 (ENSPMRG00000011007)	DDX42 (ENSPMRG00000010913)	ENSPMRG00000010798	ARL5C (ENSPMRG00000010764)	PLXDC1 (ENSPMRG00000010725)	FBXO47 (ENSPMRG00000010711)	ENSPMRG00000010706	LASP1NB (ENSPMRG00000010702)	LASP1 (ENSPMRG00000010695)	IRF3 (ENSPMRG00000010624)	ENSPMRG00000010586	RRAS (ENSPMRG00000015853)	ENSPMRG00000015798	NOSIP (ENSPMRG00000015774)
Argentine black and white tegu	MODERN SPECIES	32	ENSSMRG00000021783	ENSSMRG00000021782	ENSSMRG00000021781	ENSSMRG00000021780	TMEM101 (ENSSMRG00000021779) #11	ETV4 (ENSSMRG00000021778)	MEOX1 (ENSSMRG00000021776)	SOST (ENSSMRG00000021774)	DUSP3 (ENSSMRG00000021773)	ENSSMRG00000021772	ENSSMRG00000021771	MPP3 (ENSSMRG00000021770)	ENSSMRG00000021769	ENSSMRG00000021768 #20	LSM12 (ENSSMRG00000021766) #21	G6PC3 (ENSSMRG00000021765) #22	HDAC5 (ENSSMRG00000021764) #23	CCDC47 (ENSSMRG00000021762)	DDX42 (ENSSMRG00000021758)	ENSSMRG00000021755	ENSSMRG00000021752	ARL5C (ENSSMRG00000021750)	PLXDC1 (ENSSMRG00000021749)	FBXO47 (ENSSMRG00000021746)	LASP1 (ENSSMRG00000021745)	IRF3 (ENSSMRG00000021744)	SCAF1 (ENSSMRG00000021743)	RRAS (ENSSMRG00000021742)	PRR12 (ENSSMRG00000021741)	ENSSMRG00000021740	NOSIP (ENSSMRG00000021739)
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000169006	ENSGT00960000190099	ENSGT00390000018148	ENSGT00940000157190	ENSGT01080000257365.b.a.a.b.b	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00390000013997	ENSGT00940000156559	ENSGT00940000164841	ENSGT00390000000221.B	ENSGT00940000163066	ENSGT00440000033408.b	ENSGT00390000014175	ENSGT00950000183492	ENSGT00940000154775.c.a	ENSGT00940000160569	ENSGT00950000183205.b.a.b.a.a	ENSGT00940000160972	ENSGT00440000037417.B	ENSGT00940000158268.b
Elapidae	ANCESTRAL SPECIES	5	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000169006	ENSGT00960000190099	ENSGT00940000157190	ENSGT01080000257365.b.a.a.b.b	ENSGT00940000155311.A #20	ENSGT00390000006956.f #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00390000013997	ENSGT00940000156559	ENSGT00940000164841	ENSGT00940000163066	ENSGT00440000033408.b	ENSGT00390000014175	ENSGT00950000183492	ENSGT00940000154775.c.a.l	ENSGT00940000160569.i	ENSGT00940000160569.j	ENSGT00950000183205.b.a.b.a.a.j	ENSGT00940000160972	ENSGT00440000037417.B.z	ENSGT00940000158268.b
Elapidae_a	ANCESTRAL SPECIES	62	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000169006	ENSGT00960000190099	ENSGT00940000157190	ENSGT01080000257365.b.a.a.b.b	ENSGT00940000155311.A #20	ENSGT00390000006956.f #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00390000013997	ENSGT00940000156559	ENSGT00940000164841	ENSGT00940000163066	ENSGT00440000033408.b	ENSGT00390000014175	ENSGT00950000183492	ENSGT00940000154775.c.a.l	ENSGT00940000160569.i	ENSGT00940000160569.j	ENSGT00950000183205.b.a.b.a.a.j	ENSGT00940000160972	ENSGT00440000037417.B.z.a	ENSGT00940000158268.b
Acanthophiinae	ANCESTRAL SPECIES	59	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00940000158142	ENSGT00940000154018.a	ENSGT00390000014900.b.b.b	ENSGT00940000163612	ENSGT00940000169006	ENSGT00960000190099	ENSGT00940000157190	ENSGT01080000257365.b.a.a.b.b	ENSGT00940000155311.A #20	ENSGT00390000006956.f #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00390000013997	ENSGT00940000156559	ENSGT00940000164841	ENSGT00940000163066	ENSGT00440000033408.b	ENSGT00390000014175	ENSGT00950000183492	ENSGT00940000154775.c.a.l	ENSGT00940000160569.i	ENSGT00940000160569.j	ENSGT00950000183205.b.a.b.a.a.j	ENSGT00940000160972	ENSGT00440000037417.B.z.a	ENSGT00940000158268.b
Mainland tiger snake	MODERN SPECIES	29	ENSNSUG00000006964	SGCA (ENSNSUG00000006963) #18	COL1A1 (ENSNSUG00000006962) #17	MPP2 (ENSNSUG00000006889) #14	ENSNSUG00000006884	TMEM101 (ENSNSUG00000006883) #11	ETV4 (ENSNSUG00000006861)	MEOX1 (ENSNSUG00000006860)	SOST (ENSNSUG00000006859)	DUSP3 (ENSNSUG00000006858)	ENSNSUG00000006850	ENSNSUG00000006849	MPP3 (ENSNSUG00000006848)	ENSNSUG00000006847	ENSNSUG00000006845 #21	G6PC3 (ENSNSUG00000006844) #22	HDAC5 (ENSNSUG00000005793) #23	CCDC47 (ENSNSUG00000005785)	DDX42 (ENSNSUG00000005343)	ENSNSUG00000005339	ARL5C (ENSNSUG00000005335)	PLXDC1 (ENSNSUG00000005330)	FBXO47 (ENSNSUG00000005329)	LASP1 (ENSNSUG00000005328)	ENSNSUG00000005327	SCAF1 (ENSNSUG00000005326)	RRAS (ENSNSUG00000005311)	ENSNSUG00000005306	ENSNSUG00000005304	NOSIP (ENSNSUG00000005303)	ENSNSUG00000005302
Eastern brown snake	MODERN SPECIES	49	ENSPTXG00000013841	SGCA (ENSPTXG00000013840) #18	COL1A1 (ENSPTXG00000013838) #17	MPP2 (ENSPTXG00000013837) #14	ENSPTXG00000013836	TMEM101 (ENSPTXG00000013835) #11	ETV4 (ENSPTXG00000013833)	MEOX1 (ENSPTXG00000013831)	SOST (ENSPTXG00000013830)	DUSP3 (ENSPTXG00000013829)	ENSPTXG00000013825	MPP3 (ENSPTXG00000013824)	ENSPTXG00000013823	ENSPTXG00000013822 #20	ENSPTXG00000013821 #21	G6PC3 (ENSPTXG00000013820) #22	HDAC5 (ENSPTXG00000013819) #23	CCDC47 (ENSPTXG00000013817)	DDX42 (ENSPTXG00000013816)	ENSPTXG00000013815	ARL5C (ENSPTXG00000013814)	PLXDC1 (ENSPTXG00000013813)	FBXO47 (ENSPTXG00000013812)	LASP1NB (ENSPTXG00000013811)	ENSPTXG00000016959	ENSPTXG00000016954	ENSPTXG00000016948	ENSPTXG00000016939	RRAS (ENSPTXG00000016935)	ENSPTXG00000016929	ENSPTXG00000016925
Blue-lipped sea krait	MODERN SPECIES	3843																G6PC3 (ENSLLTG00000009690) #22
Indian cobra	MODERN SPECIES	337	ENSNNAG00000003815	COL1A1 (ENSNNAG00000003840) #17	MPP2 (ENSNNAG00000004031) #14	ENSNNAG00000004067	TMEM101 (ENSNNAG00000004085) #11	ETV4 (ENSNNAG00000004108)	MEOX1 (ENSNNAG00000004166)	SOST (ENSNNAG00000004179)	DUSP3 (ENSNNAG00000004188)	ENSNNAG00000004234	ENSNNAG00000004435	MPP3 (ENSNNAG00000004510)	ENSNNAG00000004532	ENSNNAG00000004548 #20	LSM12 (ENSNNAG00000004586) #21	G6PC3 (ENSNNAG00000004601) #22	HDAC5 (ENSNNAG00000004627) #23	CCDC47 (ENSNNAG00000004764)	DDX42 (ENSNNAG00000004829)	ENSNNAG00000004982	ARL5C (ENSNNAG00000005031)	PLXDC1 (ENSNNAG00000005068)	FBXO47 (ENSNNAG00000005442)	LASP1NB (ENSNNAG00000005476)	LASP1 (ENSNNAG00000005488)	ENSNNAG00000005502	ENSNNAG00000005518	SCAF1 (ENSNNAG00000005544)	RRAS (ENSNNAG00000005587)	ENSNNAG00000005675	ENSNNAG00000005698
Lizard	MODERN SPECIES	5	MPP2 (ENSACAG00000004972) #14	ENSACAG00000035782	ENSACAG00000004967	TMEM101 (ENSACAG00000004948) #11	ENSACAG00000004871	ETV4 (ENSACAG00000004827)	MEOX1 (ENSACAG00000041521)	SOST (ENSACAG00000043724)	ENSACAG00000004781	ENSACAG00000028613	CFAP97D1 (ENSACAG00000004771)	MPP3 (ENSACAG00000004676)	ENSACAG00000004639	ENSACAG00000028312 #20	LSM12 (ENSACAG00000037253) #21	ENSACAG00000004570 #22	HDAC5 (ENSACAG00000004207) #23	ENSACAG00000038641	ENSACAG00000004111	ENSACAG00000003994	ENSACAG00000003901	ENSACAG00000033058	ENSACAG00000003879	ENSACAG00000003812	ENSACAG00000022906	ENSACAG00000011641	ENSACAG00000011889	ENSACAG00000041446	ENSACAG00000011895	ENSACAG00000011931	ENSACAG00000012050
tuatara	MODERN SPECIES	1607										COL1A1 (ENSSPUG00000011686) #17	ENSSPUG00000011774 #15	MPP2 (ENSSPUG00000011810) #14	PYY (ENSSPUG00000011918)	TMEM101 (ENSSPUG00000011959) #11	LSM12 (ENSSPUG00000011984) #21	G6PC3 (ENSSPUG00000011991) #22	ENSSPUG00000012010 #23	HDAC5 (ENSSPUG00000012156) #23	HROB (ENSSPUG00000012394) #25	ASB16 (ENSSPUG00000012417) #24	TMUB2 (ENSSPUG00000012436) #27	ENSSPUG00000012446	ATXN7L3 (ENSSPUG00000012457) #28	UBTF (ENSSPUG00000012577)	SLC4A1 (ENSSPUG00000012804) #30	RUNDC3A (ENSSPUG00000012825) #31	ENSSPUG00000012842	MAPT (ENSSPUG00000012859)	ENSSPUG00000012926	ENSSPUG00000013068	ENSSPUG00000013080
Archelosauria	ANCESTRAL SPECIES	21	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT00800000124396	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841
Cryptodira	ANCESTRAL SPECIES	23	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT00800000124396	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841
Testudinoidea	ANCESTRAL SPECIES	19	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922.a #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT00800000124396	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841
Testudinidae	ANCESTRAL SPECIES	24	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922.a #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559
Goode s thornscrub tortoise	MODERN SPECIES	15	ENSGEVG00005012254	DLX3 (ENSGEVG00005012297)	ITGA3 (ENSGEVG00005012388)	PDK2 (ENSGEVG00005012455)	SAMD14 (ENSGEVG00005012502)	PPP1R9B (ENSGEVG00005012736) #19	SGCA (ENSGEVG00005012770) #18	ENSGEVG00005012852	MPP2 (ENSGEVG00005013554) #14	ENSGEVG00005013767	PYY (ENSGEVG00005013834)	NAGS (ENSGEVG00005013917) #12	TMEM101 (ENSGEVG00005014051) #11	ENSGEVG00005014090 #20	LSM12 (ENSGEVG00005014182) #21	G6PC3 (ENSGEVG00005014208) #22	HDAC5 (ENSGEVG00005014411) #23	HROB (ENSGEVG00005015948) #25	ASB16 (ENSGEVG00005015995) #24	TMUB2 (ENSGEVG00005016041) #27	ATXN7L3 (ENSGEVG00005016067) #28	UBTF (ENSGEVG00005016097)	SLC4A1 (ENSGEVG00005016174) #30	RUNDC3A (ENSGEVG00005016284) #31	SLC25A39 (ENSGEVG00005016328)	MAPT (ENSGEVG00005016397)	KANSL1 (ENSGEVG00005016473)	CDC27 (ENSGEVG00005016542)	ENSGEVG00005016985	ENSGEVG00005017021	DDX42 (ENSGEVG00005017108)
Abingdon island giant tortoise	MODERN SPECIES	1609	PDK2 (ENSCABG00000003835)	SAMD14 (ENSCABG00000003847)	PPP1R9B (ENSCABG00000003949) #19	SGCA (ENSCABG00000003975) #18	ENSCABG00000004319	ENSCABG00000004321	COL1A1 (ENSCABG00000004322) #17	ENSCABG00000004336 #15	MPP2 (ENSCABG00000004616) #14	ENSCABG00000004623	ENSCABG00000004625	NAGS (ENSCABG00000004628) #12	TMEM101 (ENSCABG00000004634) #11	ENSCABG00000004635 #20	LSM12 (ENSCABG00000004636) #21	G6PC3 (ENSCABG00000004639) #22	HDAC5 (ENSCABG00000004644) #23	HROB (ENSCABG00000005259) #25	ASB16 (ENSCABG00000005262) #24	TMUB2 (ENSCABG00000005265) #27	ATXN7L3 (ENSCABG00000005269) #28	UBTF (ENSCABG00000005277)	SLC4A1 (ENSCABG00000005284) #30	RUNDC3A (ENSCABG00000005289) #31	SLC25A39 (ENSCABG00000005297)	MAPT (ENSCABG00000005310)	KANSL1 (ENSCABG00000005319)	CDC27 (ENSCABG00000005333)	ENSCABG00000005486	ENSCABG00000005487	ENSCABG00000005490
Emydidae	ANCESTRAL SPECIES	26	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00730000113862	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922.a #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT00800000124396	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841
painted turtle	MODERN SPECIES	2394	SAMD14 (ENSCPBG00000027249)	ENSCPBG00000027244	PPP1R9B (ENSCPBG00000027241) #19	ENSCPBG00000027239	SGCA (ENSCPBG00000027236) #18	ENSCPBG00000027233	COL1A1 (ENSCPBG00000027141) #17	ENSCPBG00000027114 #15	MPP2 (ENSCPBG00000027112) #14	ENSCPBG00000027111	PYY (ENSCPBG00000027110)	NAGS (ENSCPBG00000027108) #12	TMEM101 (ENSCPBG00000027107) #11	ENSCPBG00000027106 #20	LSM12 (ENSCPBG00000027105) #21	G6PC3 (ENSCPBG00000027104) #22	HDAC5 (ENSCPBG00000026745) #23	HROB (ENSCPBG00000026705) #25	ASB16 (ENSCPBG00000026704) #24	TMUB2 (ENSCPBG00000026702) #27	ATXN7L3 (ENSCPBG00000026701) #28	UBTF (ENSCPBG00000026697)	ENSCPBG00000026695	SLC4A1 (ENSCPBG00000026694) #30	RUNDC3A (ENSCPBG00000026693) #31	SLC25A39 (ENSCPBG00000026692)	MAPT (ENSCPBG00000026691)	KANSL1 (ENSCPBG00000026689)	CDC27 (ENSCPBG00000026688)	ENSCPBG00000026687	ENSCPBG00000026685
Three-toed box turtle	MODERN SPECIES	91	DLX3 (ENSTMTG00000008162)	ITGA3 (ENSTMTG00000008194)	PDK2 (ENSTMTG00000008243)	SAMD14 (ENSTMTG00000008275)	ENSTMTG00000008404	PPP1R9B (ENSTMTG00000008419) #19	SGCA (ENSTMTG00000008474) #18	ENSTMTG00000008848	ENSTMTG00000008884	COL1A1 (ENSTMTG00000008995) #17	ENSTMTG00000010275 #15	MPP2 (ENSTMTG00000010299) #14	PYY (ENSTMTG00000010361)	ENSTMTG00000010384 #20	LSM12 (ENSTMTG00000010413) #21	G6PC3 (ENSTMTG00000010425) #22	HDAC5 (ENSTMTG00000011071) #23	HROB (ENSTMTG00000016656) #25	ASB16 (ENSTMTG00000016666) #24	TMUB2 (ENSTMTG00000016681) #27	ATXN7L3 (ENSTMTG00000016694) #28	UBTF (ENSTMTG00000016717)	SLC4A1 (ENSTMTG00000016808) #30	RUNDC3A (ENSTMTG00000016849) #31	SLC25A39 (ENSTMTG00000016872)	MAPT (ENSTMTG00000016911)	KANSL1 (ENSTMTG00000017023)	CDC27 (ENSTMTG00000017079)	ENSTMTG00000017103	ENSTMTG00000017112	ENSTMTG00000017121
Archosauria	ANCESTRAL SPECIES	20	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT00800000124396	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841
Aves	ANCESTRAL SPECIES	26	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871 #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT00800000124396	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841
Neognathae	ANCESTRAL SPECIES	23	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559
Neognathae_b	ANCESTRAL SPECIES	23	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559
Passeriformes	ANCESTRAL SPECIES	41	ENSGT00940000154376.b	ENSGT00940000157900	ENSGT00940000157744	ENSGT00940000163054.a.b	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000158833 #19	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534.t #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559
Great tit	MODERN SPECIES	324															LSM12 (ENSPMJG00000013450) #21	G6PC3 (ENSPMJG00000013451) #22	ENSPMJG00000013453 #23	ENSPMJG00000013454 #23	HROB (ENSPMJG00000013455) #25	ASB16 (ENSPMJG00000013456) #24	ENSPMJG00000013457 #27	ENSPMJG00000013462 #28	ENSPMJG00000013463 #28	ENSPMJG00000013464 #27
Passeriformes_d	ANCESTRAL SPECIES	37	ENSGT00950000183070.a.b	ENSGT00730000110974	ENSGT00950000182883.a.a	ENSGT00940000154376.b	ENSGT00940000157900	ENSGT00940000157744	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000158833 #19	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534.t #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559	ENSGT00390000013997
Flycatcher	MODERN SPECIES	298															ENSFALG00000001539	G6PC3 (ENSFALG00000001541) #22	ENSFALG00000026773 #28	UBTF (ENSFALG00000001553)
Passeriformes_g	ANCESTRAL SPECIES	26	ENSGT00950000183070.a.b	ENSGT00730000110974	ENSGT00950000182883.a.a	ENSGT00940000154376.b	ENSGT00940000157900	ENSGT00940000157744	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000158833 #19	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534.t #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559	ENSGT00390000013997
Medium ground finch	MODERN SPECIES	490															LSM12 (ENSGFOG00000005893) #21	ENSGFOG00000005895 #22	ENSGFOG00000005900 #23
Passeroidea	ANCESTRAL SPECIES	45	ENSGT00940000160427	ENSGT00940000161380	ENSGT00390000007741.a	ENSGT00940000157416	ENSGT00950000183070.a.b	ENSGT00730000110974	ENSGT00950000182883.a.a	ENSGT00940000154376.b	ENSGT00940000157900	ENSGT00940000157744	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534.t #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559	ENSGT00390000013997
Zebra finch	MODERN SPECIES	20	PHOSPHO1 (ENSTGUG00000022673)	ZNF652 (ENSTGUG00000003462)	PHB1 (ENSTGUG00000003470)	NGFR (ENSTGUG00000021536)	NXPH3 (ENSTGUG00000020057)	SPOP (ENSTGUG00000023775)	SLC35B1 (ENSTGUG00000001866)	KAT7 (ENSTGUG00000001873)	ENSTGUG00000019116	ENSTGUG00000027666	ENSTGUG00000024260 #15	MPP2 (ENSTGUG00000028797) #14	PYY (ENSTGUG00000023157)	TMEM101 (ENSTGUG00000028223) #11	LSM12 (ENSTGUG00000026330) #21	G6PC3 (ENSTGUG00000025513) #22	HDAC5 (ENSTGUG00000027937) #23	HROB (ENSTGUG00000027390) #25	ASB16 (ENSTGUG00000019091) #24	ENSTGUG00000023288	ATXN7L3 (ENSTGUG00000026927) #28	SLC4A1 (ENSTGUG00000001885) #30	RUNDC3A (ENSTGUG00000025220) #31	SLC25A39 (ENSTGUG00000001903)	UBTF (ENSTGUG00000001880)	ENSTGUG00000001908	KANSL1 (ENSTGUG00000001911)	CDC27 (ENSTGUG00000001915)	ENSTGUG00000001924	ENSTGUG00000025009	CCDC47 (ENSTGUG00000001935)
Common canary	MODERN SPECIES	405															LSM12 (ENSSCAG00000008976) #21	ENSSCAG00000008978 #22
Neognathae_c	ANCESTRAL SPECIES	26	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00950000185319	ENSGT00940000160643	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27	ENSGT00940000158253 #28	ENSGT00940000161141	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559
Kakapo	MODERN SPECIES	12							ENSSHBG00005015857	PPP1R9B (ENSSHBG00005015852) #19	SGCA (ENSSHBG00005015846) #18	COL1A1 (ENSSHBG00005015830) #17	ENSSHBG00005015425 #15	MPP2 (ENSSHBG00005015401) #14	PYY (ENSSHBG00005015397)	TMEM101 (ENSSHBG00005015392) #11	LSM12 (ENSSHBG00005015386) #21	G6PC3 (ENSSHBG00005015381) #22	HDAC5 (ENSSHBG00005015149) #23	HROB (ENSSHBG00005015108) #25	ASB16 (ENSSHBG00005015105) #24	ATXN7L3 (ENSSHBG00005015099) #28	UBTF (ENSSHBG00005015095)	SLC4A1 (ENSSHBG00005012535) #30	RUNDC3A (ENSSHBG00005012345) #31	SLC25A39 (ENSSHBG00005012294)	MAPT (ENSSHBG00005012158)	KANSL1 (ENSSHBG00005012007)	CDC27 (ENSSHBG00005011976)	ENSSHBG00005011956	ENSSHBG00005011928	DDX42 (ENSSHBG00005011912)	CCDC47 (ENSSHBG00005000976)
Golden eagle	MODERN SPECIES	24	FAM117A (ENSACCG00020006125)	KAT7 (ENSACCG00020006157)	ENSACCG00020006173	DLX3 (ENSACCG00020006186)	ITGA3 (ENSACCG00020006218)	PDK2 (ENSACCG00020011423)	SAMD14 (ENSACCG00020011440)	PPP1R9B (ENSACCG00020011480) #19	SGCA (ENSACCG00020011502) #18	ENSACCG00020011586 #15	MPP2 (ENSACCG00020011698) #14	ENSACCG00020011728	PYY (ENSACCG00020011766)	TMEM101 (ENSACCG00020011792) #11	LSM12 (ENSACCG00020011812) #21	G6PC3 (ENSACCG00020011848) #22	HDAC5 (ENSACCG00020012220) #23	HROB (ENSACCG00020012573) #25	ASB16 (ENSACCG00020012606) #24	TMUB2 (ENSACCG00020012623) #27	ATXN7L3 (ENSACCG00020012643) #28	UBTF (ENSACCG00020012694)	SLC4A1 (ENSACCG00020012822) #30	RUNDC3A (ENSACCG00020012922) #31	SLC25A39 (ENSACCG00020012990)	MAPT (ENSACCG00020013118)	KANSL1 (ENSACCG00020013218)	CDC27 (ENSACCG00020013256)	ENSACCG00020013280	ENSACCG00020013301	DDX42 (ENSACCG00020013330)
Galloanserae	ANCESTRAL SPECIES	23	ENSGT00940000157900	ENSGT00950000183046.a.b	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00940000155348.B #14	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160773 #24	ENSGT00940000158253 #28	ENSGT00940000161141.e	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827	ENSGT00390000016292
Phasianidae	ANCESTRAL SPECIES	21	ENSGT00950000183046.a.b	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00950000185319	ENSGT01070000257226	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160773 #24	ENSGT00940000158253 #28	ENSGT00940000161141.f.a	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827	ENSGT00390000016292
Phasianidae_b	ANCESTRAL SPECIES	21	ENSGT00950000183046.a.b	ENSGT00940000157744	ENSGT00940000165079	ENSGT00940000158951	ENSGT00940000157746	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000160279	ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.d #15	ENSGT00950000185319	ENSGT01070000257226	ENSGT00390000011938 #11	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000161141.f.a	ENSGT00940000157423 #30	ENSGT00940000158922 #31	ENSGT00940000156382	ENSGT00940000155494	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.b.a	ENSGT00940000164841	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827	ENSGT00390000016292	ENSGT00940000158377.b	ENSGT00940000158767
Turkey	MODERN SPECIES	887																ENSMGAG00000008407 #22
Chicken	MODERN SPECIES	19	KAT7 (ENSGALG00010024189)	Dlx4 (ENSGALG00010021149)	DLX3 (ENSGALG00010026116)	ITGA3 (ENSGALG00010025286)	PDK2 (ENSGALG00010025274)	SAMD14 (ENSGALG00010025263)	PPP1R9B (ENSGALG00010025252) #19	SGCA (ENSGALG00010025247) #18	ENSGALG00010026410	COL1A1 (ENSGALG00010025092) #17	ENSGALG00010025006 #15	PPY (ENSGALG00010024981)	ENSGALG00010024972	TMEM101 (ENSGALG00010024968) #11	LSM12 (ENSGALG00010024961) #21	G6PC3 (ENSGALG00010024934) #22	ENSGALG00010024923	UBTF (ENSGALG00010024910)	SLC4A1 (ENSGALG00010024885) #30	RUNDC3A (ENSGALG00010024872) #31	SLC25A39 (ENSGALG00010024858)	MAPT (ENSGALG00010024833)	KANSL1 (ENSGALG00010024809)	CDC27 (ENSGALG00010024770)	MYL4 (ENSGALG00010021682)	ENSGALG00010021690	DDX42 (ENSGALG00010021675)	CCDC47 (ENSGALG00010021666)	STRADA (ENSGALG00010021658)	RNF113B (ENSGALG00010021651)	LIMD2 (ENSGALG00010021632)
Japanese quail	MODERN SPECIES	19	KAT7 (ENSCJPG00005019328)	ENSCJPG00005019327	DLX3 (ENSCJPG00005019325)	ITGA3 (ENSCJPG00005019324)	PDK2 (ENSCJPG00005019323)	SAMD14 (ENSCJPG00005019322)	PPP1R9B (ENSCJPG00005019321) #19	SGCA (ENSCJPG00005019320) #18	ENSCJPG00005019319	ENSCJPG00005019318 #15	ENSCJPG00005019317 #15	ENSCJPG00005019316	ENSCJPG00005019315	TMEM101 (ENSCJPG00005019314) #11	LSM12 (ENSCJPG00005019313) #21	G6PC3 (ENSCJPG00005019312) #22	ASB16 (ENSCJPG00005019310) #24	ATXN7L3 (ENSCJPG00005019309) #28	ENSCJPG00005019308	ENSCJPG00005019307	SLC4A1 (ENSCJPG00005019306) #30	RUNDC3A (ENSCJPG00005019304) #31	SLC25A39 (ENSCJPG00005019303)	MAPT (ENSCJPG00005019301)	KANSL1 (ENSCJPG00005019300)	CDC27 (ENSCJPG00005019239)	ENSCJPG00005019238	ENSCJPG00005019235	DDX42 (ENSCJPG00005019182)	CCDC47 (ENSCJPG00005019181)	STRADA (ENSCJPG00005019180)
African ostrich	MODERN SPECIES	1042										ITGA3 (ENSSCUG00000018431)	PDK2 (ENSSCUG00000018425)	SAMD14 (ENSSCUG00000018422)	COL1A1 (ENSSCUG00000018417) #17	ENSSCUG00000018413	LSM12 (ENSSCUG00000018412) #21	ENSSCUG00000018411 #22
Actinopterygii	ANCESTRAL SPECIES	4												ENSGT00390000005602 #12	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00940000160643	ENSGT00940000155348.B #14	ENSGT00940000163871 #15	ENSGT00940000156584 #17	ENSGT00390000005672.a.a #18	ENSGT00940000158833 #19	ENSGT00940000160279	ENSGT01030000234646.B.a.a.a.a	ENSGT00940000157746	ENSGT00940000158951	ENSGT00940000165079	ENSGT00940000157744	ENSGT00470000042293.a.b.a.b	ENSGT00470000042293.a.b.a.a
Neopterygii	ANCESTRAL SPECIES	136						ENSGT00940000158833 #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584 #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000006679.b	ENSGT00390000011938 #11	ENSGT00390000005602 #12	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00940000159914	ENSGT00940000160643	ENSGT00940000155348.B #14	ENSGT00940000163871.b #15	ENSGT01090000259987.b.b.a.a.a.a	ENSGT00390000010523.c.a	ENSGT00940000168169	ENSGT01020000230346.F	ENSGT00940000158654	ENSGT00940000154991.b	ENSGT00940000154991.a.b	ENSGT00400000022305 #25	ENSGT00940000160773 #24	ENSGT00390000014069.b #27
Osteoglossocephalai	ANCESTRAL SPECIES	41	ENSGT01090000260005.a.b.a.a	ENSGT00940000157539	ENSGT00940000164208	ENSGT00940000153653.a.a	ENSGT00390000017328	ENSGT00390000016438	ENSGT00940000160279	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000006679.b	ENSGT00390000011938 #11	ENSGT00940000155311.A #20	ENSGT00390000006956 #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00940000159871.b.a.a	ENSGT00390000014892
Clupeocephala	ANCESTRAL SPECIES	43	ENSGT00940000164208	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00390000017328.a.b	ENSGT00390000016438	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000155111	ENSGT00510000050089.a.b	ENSGT00730000111991	ENSGT00940000154363.B	ENSGT00940000167352	ENSGT01100000264459	ENSGT00940000166534	ENSGT01030000234570.d.b.a.b.b.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	160	ENSGT00950000182894.A.b.b	ENSGT00980000202966	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00970000196963
Acanthomorphata	ANCESTRAL SPECIES	12	ENSGT00980000202966	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	21	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01070000254256
Percomorphaceae	ANCESTRAL SPECIES	21	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040
Percomorphaceae_B	ANCESTRAL SPECIES	23	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.d
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.d
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	13	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.d	ENSGT01050000245040	ENSGT00950000183002.C.c.b
Aplocheiloidei	ANCESTRAL SPECIES	4	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00940000174909	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000176991
Mangrove rivulus	MODERN SPECIES	4	TEKT3 (ENSKMAG00000008213)	PMP22 (ENSKMAG00000008193)	hs3st3b1b (ENSKMAG00000008175)	cox10 (ENSKMAG00000008138)	ENSKMAG00000008118	ENSKMAG00000008035	ENSKMAG00000008003	PPP1R9B (ENSKMAG00000007976) #19	ENSKMAG00000007947 #18	col1a1b (ENSKMAG00000007822) #17	retsatl (ENSKMAG00000007772) #15	ENSKMAG00000007761	TMEM101 (ENSKMAG00000007744) #11	ENSKMAG00000007726	lsm12b (ENSKMAG00000007704) #21	g6pc3 (ENSKMAG00000007687) #22	TANC2 (ENSKMAG00000007250)	ENSKMAG00000007138	coa3a (ENSKMAG00000007122)	ENSKMAG00000007091	vps25 (ENSKMAG00000007059)	ENSKMAG00000007019	mfsd13a (ENSKMAG00000006948)	SEMA4G (ENSKMAG00000006914)	mrpl43 (ENSKMAG00000006900)	twnk (ENSKMAG00000006869)	LZTS2 (ENSKMAG00000006847)	PDZD7 (ENSKMAG00000006743)	scn4aa (ENSKMAG00000006664)	ENSKMAG00000006625	ENSKMAG00000006611
Turquoise killifish	MODERN SPECIES	1621	PMP22 (ENSNFUG00015025265)	ENSNFUG00015025263	Nfu_g_1_022999 (ENSNFUG00015025261)	COX10 (ENSNFUG00015025260)	ENSNFUG00015025259	ENSNFUG00015025256	PPP1R9B (ENSNFUG00015025253) #19	SGCA (ENSNFUG00015025251) #18	col1a1b (ENSNFUG00015024901) #17	retsatl (ENSNFUG00015024791) #15	ENSNFUG00015024788	TMEM101 (ENSNFUG00015024787) #11	ENSNFUG00015024785 #20	ENSNFUG00015024784	LSM12 (ENSNFUG00015024782) #21	G6PC3 (ENSNFUG00015024778) #22	ENSNFUG00015024775	TANC2 (ENSNFUG00015024253)	COA3 (ENSNFUG00015024213)	ENSNFUG00015024211	VPS25 (ENSNFUG00015024207)	ENSNFUG00015024206	ENSNFUG00015024204	TMEM180 (ENSNFUG00015024200)	SEMA4G (ENSNFUG00015024138)	MRPL43 (ENSNFUG00015024130)	C10ORF2 (ENSNFUG00015024129)	ENSNFUG00015024127	ENSNFUG00015024118	selenou1b (ENSNFUG00015024112)	ENSNFUG00015024115
Cyprinodontoidei	ANCESTRAL SPECIES	17	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.d	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.d	ENSGT01050000245040	ENSGT00950000183002.C.c.b
NAME_4	ANCESTRAL SPECIES	22	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.d	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00950000183002.C.c.b	ENSGT00980000198953	ENSGT00940000165336.a.a.a
Mummichog	MODERN SPECIES	2291	CDC42EP4 (ENSFHEG00000020666)	TEKT3 (ENSFHEG00000020662)	PMP22 (ENSFHEG00000020639)	hs3st3b1b (ENSFHEG00000020632)	cox10 (ENSFHEG00000020599)	ENSFHEG00000020572	ENSFHEG00000020552	ENSFHEG00000020431	PPP1R9B (ENSFHEG00000020424) #19	ENSFHEG00000020402 #18	col1a1b (ENSFHEG00000020368) #17	retsatl (ENSFHEG00000019976) #15	gngt2b (ENSFHEG00000019942)	TMEM101 (ENSFHEG00000019934) #11	lsm12b (ENSFHEG00000019913) #21	g6pc3 (ENSFHEG00000019889) #22	TANC2 (ENSFHEG00000019830)	ENSFHEG00000019527	ENSFHEG00000019512	coa3a (ENSFHEG00000019499)	WNK4 (ENSFHEG00000019504)	vps25 (ENSFHEG00000019492)	ENSFHEG00000019485	mfsd13a (ENSFHEG00000019469)
Sheepshead minnow	MODERN SPECIES	130											ENSCVAG00000008880	TMEM101 (ENSCVAG00000008806) #11	gngt2b (ENSCVAG00000008769)	ENSCVAG00000008758 #20	lsm12b (ENSCVAG00000008755) #21	g6pc3 (ENSCVAG00000008739) #22	TANC2 (ENSCVAG00000008699)	CNTD1 (ENSCVAG00000008237)	coa3a (ENSCVAG00000008203)	WNK4 (ENSCVAG00000008191)	vps25 (ENSCVAG00000008171)	ENSCVAG00000000229	ENSCVAG00000000699	mfsd13a (ENSCVAG00000008111)	SEMA4G (ENSCVAG00000008075)	mrpl43 (ENSCVAG00000008026)	twnk (ENSCVAG00000000734)	LZTS2 (ENSCVAG00000007970)	PDZD7 (ENSCVAG00000007948)	ENSCVAG00000007901	selenou1b (ENSCVAG00000007892)
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00940000161435.a.a	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a
Poecilia	ANCESTRAL SPECIES	15	ENSGT00940000161435.a.a	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a
NAME_6	ANCESTRAL SPECIES		ENSGT00940000161435.a.a	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b.d	ENSGT00950000182860.a.a.a.ub.b.c	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040
Sailfin molly	MODERN SPECIES	203						ENSPLAG00000021930	ENSPLAG00000021919	PPP1R9B (ENSPLAG00000021914) #19	SGCA (ENSPLAG00000021878) #18	col1a1b (ENSPLAG00000021746) #17	retsatl (ENSPLAG00000021193) #15	TMEM101 (ENSPLAG00000021143) #11	gngt2b (ENSPLAG00000021120)	ENSPLAG00000021102 #20	lsm12b (ENSPLAG00000021089) #21	g6pc3 (ENSPLAG00000021065) #22	TANC2 (ENSPLAG00000021020)
Amazon molly	MODERN SPECIES	259	TEKT3 (ENSPFOG00000014939)	PMP22 (ENSPFOG00000014969)	ENSPFOG00000022614	hs3st3b1b (ENSPFOG00000014987)	cox10 (ENSPFOG00000015012)	ENSPFOG00000015053	ENSPFOG00000015062	PPP1R9B (ENSPFOG00000015082) #19	ENSPFOG00000015143 #18	col1a1b (ENSPFOG00000015217) #17	retsatl (ENSPFOG00000015854) #15	ENSPFOG00000015901	TMEM101 (ENSPFOG00000015906) #11	ENSPFOG00000015919 #20	lsm12b (ENSPFOG00000015930) #21	g6pc3 (ENSPFOG00000015953) #22	TANC2 (ENSPFOG00000015992)	vps25 (ENSPFOG00000016250)	coa3a (ENSPFOG00000016362)	ENSPFOG00000016371	mfsd13a (ENSPFOG00000016481)	ENSPFOG00000022769	mfsd13a (ENSPFOG00000016551)	SEMA4G (ENSPFOG00000016573)	mrpl43 (ENSPFOG00000016638)	twnk (ENSPFOG00000016651)	LZTS2 (ENSPFOG00000016675)	PDZD7 (ENSPFOG00000016695)	ENSPFOG00000016758	ENSPFOG00000024577	scn4aa (ENSPFOG00000016785)
Guppy	MODERN SPECIES	449	CDC42EP4 (ENSPREG00000009755)	TEKT3 (ENSPREG00000009761)	PMP22 (ENSPREG00000009776)	hs3st3b1b (ENSPREG00000009782)	cox10 (ENSPREG00000009803)	ENSPREG00000009845	ENSPREG00000009867	PPP1R9B (ENSPREG00000009929) #19	ENSPREG00000010057 #18	col1a1b (ENSPREG00000010085) #17	retsatl (ENSPREG00000010147) #15	gngt2b (ENSPREG00000010185)	TMEM101 (ENSPREG00000010204) #11	ENSPREG00000010225 #20	lsm12b (ENSPREG00000010236) #21	g6pc3 (ENSPREG00000010255) #22	TANC2 (ENSPREG00000010337)	ENSPREG00000010670	ENSPREG00000010696	coa3a (ENSPREG00000010733)	vps25 (ENSPREG00000010754)	ENSPREG00000010824	ENSPREG00000010858	mfsd13a (ENSPREG00000010893)	SEMA4G (ENSPREG00000010942)	mrpl43 (ENSPREG00000010980)	twnk (ENSPREG00000010995)	LZTS2 (ENSPREG00000011014)	PDZD7 (ENSPREG00000011027)	ENSPREG00000011041	ENSPREG00000011047
Platyfish	MODERN SPECIES	1	CDC42EP4 (ENSXMAG00000019871)	TEKT3 (ENSXMAG00000017277)	PMP22 (ENSXMAG00000017289)	hs3st3b1b (ENSXMAG00000021283)	cox10 (ENSXMAG00000029198)	ENSXMAG00000008054	prdm9 (ENSXMAG00000028303)	PPP1R9B (ENSXMAG00000017306) #19	ENSXMAG00000017322 #18	col1a1b (ENSXMAG00000017341) #17	retsatl (ENSXMAG00000017567) #15	TMEM101 (ENSXMAG00000025118) #11	gngt2b (ENSXMAG00000023958)	ENSXMAG00000022414 #20	lsm12b (ENSXMAG00000020950) #21	g6pc3 (ENSXMAG00000017595) #22	TANC2 (ENSXMAG00000017606)	ENSXMAG00000017623	ENSXMAG00000023332	ENSXMAG00000029848	vps25 (ENSXMAG00000017632)	ENSXMAG00000017635	mfsd13a (ENSXMAG00000017641)	SEMA4G (ENSXMAG00000017646)	mrpl43 (ENSXMAG00000017648)	twnk (ENSXMAG00000017649)	LZTS2 (ENSXMAG00000017655)	ENSXMAG00000022549	ENSXMAG00000017660	ENSXMAG00000029467	selenou1b (ENSXMAG00000017667)
Oryzias	ANCESTRAL SPECIES	11	ENSGT00940000154768.A.a.g.b.d	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000161979.B.o.cb.e	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a	ENSGT00940000177233
Oryzias_b	ANCESTRAL SPECIES	9	ENSGT00940000154768.A.a.g.b.d	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000161979.B.o.cb.e	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000180272	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00940000159871.b.a.a	ENSGT00390000016262	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000164872.a	ENSGT00940000177267
Javanese ricefish	MODERN SPECIES	10	PMP22 (ENSOJAG00000023660)	ENSOJAG00000023665	hs3st3b1b (ENSOJAG00000023667)	cox10 (ENSOJAG00000023668)	ENSOJAG00000023671	ENSOJAG00000023675	ENSOJAG00000023677	PPP1R9B (ENSOJAG00000023679) #19	ENSOJAG00000023680 #18	col1a1b (ENSOJAG00000023691) #17	retsatl (ENSOJAG00000023729) #15	gngt2b (ENSOJAG00000023732)	TMEM101 (ENSOJAG00000012168) #11	ENSOJAG00000012172 #20	lsm12b (ENSOJAG00000012182) #21	g6pc3 (ENSOJAG00000012201) #22	TANC2 (ENSOJAG00000012574)	ENSOJAG00000015962	coa3a (ENSOJAG00000016006)	ENSOJAG00000016013	mfsd13a (ENSOJAG00000016029)	SEMA4G (ENSOJAG00000016046)	mrpl43 (ENSOJAG00000016191)	twnk (ENSOJAG00000016202)	LZTS2 (ENSOJAG00000016216)	ENSOJAG00000016326	ENSOJAG00000016348	ENSOJAG00000016401	scn4aa (ENSOJAG00000016423)	ENSOJAG00000016793	ENSOJAG00000016818
Indian medaka	MODERN SPECIES	17	ENSOMEG00000006560	hs3st3b1b (ENSOMEG00000006489)	cox10 (ENSOMEG00000006478)	ENSOMEG00000006449	ENSOMEG00000006435	PPP1R9B (ENSOMEG00000006428) #19	ENSOMEG00000006396 #18	col1a1b (ENSOMEG00000006356) #17	ENSOMEG00000006263	ENSOMEG00000006251	retsatl (ENSOMEG00000006232) #15	gngt2b (ENSOMEG00000006205)	TMEM101 (ENSOMEG00000006194) #11	ENSOMEG00000006167 #20	lsm12b (ENSOMEG00000006184) #21	g6pc3 (ENSOMEG00000006156) #22	TANC2 (ENSOMEG00000006083)	ENSOMEG00000005871	ENSOMEG00000000125	ENSOMEG00000005837	coa3a (ENSOMEG00000005746)	vps25 (ENSOMEG00000005738)	ENSOMEG00000005703	ENSOMEG00000005598	mfsd13a (ENSOMEG00000005564)	SEMA4G (ENSOMEG00000005533)	mrpl43 (ENSOMEG00000005471)	twnk (ENSOMEG00000005446)	LZTS2 (ENSOMEG00000005423)	PDZD7 (ENSOMEG00000005403)	ENSOMEG00000005362
Oryzias_a	ANCESTRAL SPECIES	17	ENSGT00940000161435.a.a	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b.d	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00950000183052.b.c.b.a.d	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a	ENSGT00940000177233
Chinese medaka	MODERN SPECIES	1317	CDC42EP4 (ENSOSIG00000019510)	TEKT3 (ENSOSIG00000019514)	PMP22 (ENSOSIG00000019515)	hs3st3b1b (ENSOSIG00000019518)	cox10 (ENSOSIG00000019522)	ENSOSIG00000019523	ENSOSIG00000019527	PPP1R9B (ENSOSIG00000019533) #19	SGCA (ENSOSIG00000019534) #18	col1a1b (ENSOSIG00000019541) #17	retsatl (ENSOSIG00000019595) #15	gngt2b (ENSOSIG00000019596)	TMEM101 (ENSOSIG00000019602) #11	ENSOSIG00000019610 #20	lsm12b (ENSOSIG00000019616) #21	g6pc3 (ENSOSIG00000019617) #22	TANC2 (ENSOSIG00000019750)	coa3a (ENSOSIG00000022002)	ENSOSIG00000022007	vps25 (ENSOSIG00000022012)	ENSOSIG00000022013	mfsd13a (ENSOSIG00000022015)	mrpl43 (ENSOSIG00000022016)	twnk (ENSOSIG00000022017)	LZTS2 (ENSOSIG00000022018)	PDZD7 (ENSOSIG00000022022)	ENSOSIG00000022023	selenou1b (ENSOSIG00000022026)	scn4aa (ENSOSIG00000022054)	ENSOSIG00000022164	ENSOSIG00000022167
Japanese Medaka HdrR	MODERN SPECIES	10	PMP22 (ENSORLG00000011131)	hs3st3b1b (ENSORLG00000025914)	cox10 (ENSORLG00000011167)	ENSORLG00000026150	ENSORLG00000024254	ENSORLG00000028576	ENSORLG00000011187	PPP1R9B (ENSORLG00000011201) #19	ENSORLG00000011230 #18	col1a1b (ENSORLG00000011273) #17	retsatl (ENSORLG00000011293) #15	gngt2b (ENSORLG00000028846)	TMEM101 (ENSORLG00000023246) #11	ENSORLG00000029617 #20	lsm12b (ENSORLG00000011310) #21	g6pc3 (ENSORLG00000011333) #22	TANC2 (ENSORLG00000011361)	ENSORLG00000027831	ENSORLG00000011377	coa3a (ENSORLG00000030078)	ENSORLG00000011395	vps25 (ENSORLG00000011413)	ENSORLG00000011466	mfsd13a (ENSORLG00000011490)	SEMA4G (ENSORLG00000011518)	twnk (ENSORLG00000011537)	mrpl43 (ENSORLG00000011530)	LZTS2 (ENSORLG00000011552)	PDZD7 (ENSORLG00000011565)	ENSORLG00000011569	ENSORLG00000028793
Ovalentaria_B	ANCESTRAL SPECIES	21	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00980000198953
Pomacentridae	ANCESTRAL SPECIES	41	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a.g
Pomacentridae_A	ANCESTRAL SPECIES	39	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a.g	ENSGT00940000177233
Amphiprion	ANCESTRAL SPECIES	59														ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a.g	ENSGT00940000177233	ENSGT00940000171531
Clown anemonefish	MODERN SPECIES	863															lsm12b (ENSAOCG00000021847) #21	g6pc3 (ENSAOCG00000021814) #22	TANC2 (ENSAOCG00000021736)
Orange clownfish	MODERN SPECIES	10														ENSAPEG00000002242 #20	lsm12b (ENSAPEG00000002252) #21	g6pc3 (ENSAPEG00000002276) #22	TANC2 (ENSAPEG00000002287)	coa3a (ENSAPEG00000002385)	WNK4 (ENSAPEG00000002415)	vps25 (ENSAPEG00000002449)	ENSAPEG00000002491	mfsd13a (ENSAPEG00000002581)	SEMA4G (ENSAPEG00000002638)	mrpl43 (ENSAPEG00000002700)	twnk (ENSAPEG00000002711)	LZTS2 (ENSAPEG00000002760)	PDZD7 (ENSAPEG00000002780)	selenou1b (ENSAPEG00000002848)	ENSAPEG00000002893	ENSAPEG00000002896	scn4aa (ENSAPEG00000002925)
Spiny chromis	MODERN SPECIES	104				cox10 (ENSAPOG00000008368)	hs3st3b1b (ENSAPOG00000008342)	ENSAPOG00000008333	ENSAPOG00000008319	PPP1R9B (ENSAPOG00000008305) #19	SGCA (ENSAPOG00000008246) #18	col1a1b (ENSAPOG00000008178) #17	retsatl (ENSAPOG00000007997) #15	gngt2b (ENSAPOG00000007978)	TMEM101 (ENSAPOG00000007939) #11	ENSAPOG00000007921 #20	lsm12b (ENSAPOG00000007907) #21	g6pc3 (ENSAPOG00000007873) #22	TANC2 (ENSAPOG00000007800)	ENSAPOG00000007493	ENSAPOG00000007445	coa3a (ENSAPOG00000007392)	vps25 (ENSAPOG00000007375)	ARHGAP27 (ENSAPOG00000007354)	mfsd13a (ENSAPOG00000007262)	SEMA4G (ENSAPOG00000007211)
Bicolor damselfish	MODERN SPECIES	741															lsm12b (ENSSPAG00000017058) #21	g6pc3 (ENSSPAG00000017084) #22	TANC2 (ENSSPAG00000017098)	ENSSPAG00000017156	CNTD1 (ENSSPAG00000017170)	coa3a (ENSSPAG00000017191)	WNK4 (ENSSPAG00000017209)	vps25 (ENSSPAG00000017271)	ENSSPAG00000017290	mfsd13a (ENSSPAG00000017332)	ENSSPAG00000017378
Cichlidae	ANCESTRAL SPECIES	15	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00980000198953	ENSGT00950000183002.C.c.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000171531
Nile tilapia	MODERN SPECIES	20	TEKT3 (ENSONIG00000007981)	PMP22 (ENSONIG00000007977)	hs3st3b1b (ENSONIG00000029010)	cox10 (ENSONIG00000032031)	ENSONIG00000037600	ENSONIG00000007971	ENSONIG00000007967	PPP1R9B (ENSONIG00000007966) #19	ENSONIG00000007963 #18	col1a1b (ENSONIG00000007944) #17	retsatl (ENSONIG00000007943) #15	ENSONIG00000041637	TMEM101 (ENSONIG00000007941) #11	ENSONIG00000007939 #20	lsm12b (ENSONIG00000007933) #21	g6pc3 (ENSONIG00000039829) #22	TANC2 (ENSONIG00000007927)	CNTD1 (ENSONIG00000040597)	coa3a (ENSONIG00000032871)	WNK4 (ENSONIG00000007921)	vps25 (ENSONIG00000034604)	ENSONIG00000007910	mfsd13a (ENSONIG00000007906)	SEMA4G (ENSONIG00000007902)	mrpl43 (ENSONIG00000028203)	twnk (ENSONIG00000007901)	LZTS2 (ENSONIG00000007899)	PDZD7 (ENSONIG00000007895)	selenou1b (ENSONIG00000007893)	ENSONIG00000040080	ENSONIG00000029634
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000171531
Lyretail cichlid	MODERN SPECIES	309	CDC42EP4 (ENSNBRG00000006991)	TEKT3 (ENSNBRG00000006962)	PMP22 (ENSNBRG00000006954)	hs3st3b1b (ENSNBRG00000006948)	cox10 (ENSNBRG00000006925)	ENSNBRG00000006850	ENSNBRG00000006812	PPP1R9B (ENSNBRG00000006784) #19	ENSNBRG00000006769 #18	col1a1b (ENSNBRG00000006458) #17	retsatl (ENSNBRG00000006347) #15	ENSNBRG00000006330	TMEM101 (ENSNBRG00000006298) #11	ENSNBRG00000006288 #20	lsm12b (ENSNBRG00000006266) #21	g6pc3 (ENSNBRG00000006183) #22	TANC2 (ENSNBRG00000006094)	CNTD1 (ENSNBRG00000006058)	coa3a (ENSNBRG00000006030)	WNK4 (ENSNBRG00000005897)	vps25 (ENSNBRG00000005886)	ENSNBRG00000005783	ENSNBRG00000005760	mfsd13a (ENSNBRG00000005709)	SEMA4G (ENSNBRG00000005630)	mrpl43 (ENSNBRG00000005614)	twnk (ENSNBRG00000005585)	LZTS2 (ENSNBRG00000005564)	ENSNBRG00000005546	ENSNBRG00000005508	selenou1b (ENSNBRG00000005477)
Haplochromini	DUPLICATION
Haplochromini	ANCESTRAL SPECIES	17	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b.a #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000171531
Burton s mouthbrooder	MODERN SPECIES	274	TEKT3 (ENSHBUG00000008256)	PMP22 (ENSHBUG00000008227)	hs3st3b1b (ENSHBUG00000008203)	cox10 (ENSHBUG00000008195)	ENSHBUG00000008150	ENSHBUG00000008123	ENSHBUG00000008110	PPP1R9B (ENSHBUG00000008095) #19	ENSHBUG00000008015 #18	col1a1b (ENSHBUG00000007919) #17	retsatl (ENSHBUG00000007763) #15	ENSHBUG00000007711	TMEM101 (ENSHBUG00000007702) #11	ENSHBUG00000007683 #20	lsm12b (ENSHBUG00000007667) #21	g6pc3 (ENSHBUG00000007643) #22	TANC2 (ENSHBUG00000007563)	ENSHBUG00000007054	ENSHBUG00000007041	coa3a (ENSHBUG00000007018)	WNK4 (ENSHBUG00000007003)	vps25 (ENSHBUG00000006956)	ENSHBUG00000006939	mfsd13a (ENSHBUG00000006902)	SEMA4G (ENSHBUG00000006872)	mrpl43 (ENSHBUG00000006858)	twnk (ENSHBUG00000000743)	LZTS2 (ENSHBUG00000006810)	PDZD7 (ENSHBUG00000006794)	ENSHBUG00000006768	selenou1b (ENSHBUG00000000765)
Haplochromini_A	ANCESTRAL SPECIES	16	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b.a #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000171531
Haplochromini_B	ANCESTRAL SPECIES	15	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b.a #22	ENSGT00940000156447.a.a	ENSGT00940000178451	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000171531
Zebra mbuna	MODERN SPECIES	1111	TEKT3 (ENSMZEG00005005280)	PMP22 (ENSMZEG00005005295)	hs3st3b1b (ENSMZEG00005005305)	cox10 (ENSMZEG00005005321)	ENSMZEG00005005336	ENSMZEG00005005362	ENSMZEG00005005598	PPP1R9B (ENSMZEG00005005608) #19	ENSMZEG00005005635 #18	col1a1b (ENSMZEG00005005660) #17	retsatl (ENSMZEG00005005721) #15	ENSMZEG00005005729	TMEM101 (ENSMZEG00005005738) #11	ENSMZEG00005005746 #20	lsm12b (ENSMZEG00005005754) #21	g6pc3 (ENSMZEG00005005766) #22	TANC2 (ENSMZEG00005005801)	ENSMZEG00005005946	CNTD1 (ENSMZEG00005005953)	coa3a (ENSMZEG00005005964)	WNK4 (ENSMZEG00005005977)	vps25 (ENSMZEG00005005990)	ENSMZEG00005005997	mfsd13a (ENSMZEG00005006022)	SEMA4G (ENSMZEG00005006053)	mrpl43 (ENSMZEG00005006080)	twnk (ENSMZEG00005006096)	LZTS2 (ENSMZEG00005006119)	PDZD7 (ENSMZEG00005006137)	selenou1b (ENSMZEG00005006154)	ENSMZEG00005006182
Eastern happy	MODERN SPECIES	20	TEKT3 (ENSACLG00000026587)	PMP22 (ENSACLG00000026572)	hs3st3b1b (ENSACLG00000026569)	cox10 (ENSACLG00000026559)	ENSACLG00000026555	ENSACLG00000026544	ENSACLG00000026524	PPP1R9B (ENSACLG00000026498) #19	ENSACLG00000026477 #18	col1a1b (ENSACLG00000026412) #17	retsatl (ENSACLG00000026371) #15	ENSACLG00000026365	TMEM101 (ENSACLG00000026344) #11	ENSACLG00000026339 #20	lsm12b (ENSACLG00000026332) #21	g6pc3 (ENSACLG00000026327) #22	TANC2 (ENSACLG00000026239)	ENSACLG00000026222	CNTD1 (ENSACLG00000026214)	coa3a (ENSACLG00000026204)	WNK4 (ENSACLG00000026159)	vps25 (ENSACLG00000026141)	ENSACLG00000026114	mfsd13a (ENSACLG00000026093)	SEMA4G (ENSACLG00000026082)	mrpl43 (ENSACLG00000026075)	twnk (ENSACLG00000026060)	LZTS2 (ENSACLG00000026055)	PDZD7 (ENSACLG00000026027)	selenou1b (ENSACLG00000026005)	ENSACLG00000025999
P. nyererei	MODERN SPECIES	312	CDC42EP4 (ENSPNYG00000004184)	TEKT3 (ENSPNYG00000004162)	PMP22 (ENSPNYG00000004144)	hs3st3b1b (ENSPNYG00000004135)	cox10 (ENSPNYG00000004100)	ENSPNYG00000004009	ENSPNYG00000003991	PPP1R9B (ENSPNYG00000003964) #19	ENSPNYG00000003945 #18	col1a1b (ENSPNYG00000003644) #17	retsatl (ENSPNYG00000003543) #15	gngt2b (ENSPNYG00000003458)	TMEM101 (ENSPNYG00000003435) #11	ENSPNYG00000003409	lsm12b (ENSPNYG00000003386) #21	g6pc3 (ENSPNYG00000003318) #22	TANC2 (ENSPNYG00000003236)	ENSPNYG00000003223	CNTD1 (ENSPNYG00000003197)	coa3a (ENSPNYG00000003189)	WNK4 (ENSPNYG00000003180)	vps25 (ENSPNYG00000003169)	ENSPNYG00000003157	mfsd13a (ENSPNYG00000003112)	SEMA4G (ENSPNYG00000003032)	mrpl43 (ENSPNYG00000003000)	twnk (ENSPNYG00000002977)	LZTS2 (ENSPNYG00000002965)	PDZD7 (ENSPNYG00000002922)	selenou1b (ENSPNYG00000002881)	ENSPNYG00000002866
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000183150.b.b #22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000183150.b.b #22
P. nyererei	MODERN SPECIES	65																g6pc3 (ENSPNYG00000024057) #22
Midas cichlid	MODERN SPECIES	1140	TEKT3 (ENSACIG00000009053)	PMP22 (ENSACIG00000009004)	hs3st3b1b (ENSACIG00000008950)	cox10 (ENSACIG00000008913)	ENSACIG00000008899	ENSACIG00000008787	prdm9 (ENSACIG00000008756)	PPP1R9B (ENSACIG00000008730) #19	ENSACIG00000008697 #18	col1a1b (ENSACIG00000008616) #17	retsatl (ENSACIG00000008582) #15	ENSACIG00000008571	TMEM101 (ENSACIG00000008561) #11	ENSACIG00000008548 #20	lsm12b (ENSACIG00000008538) #21	g6pc3 (ENSACIG00000008525) #22	TANC2 (ENSACIG00000008467)	CNTD1 (ENSACIG00000008429)	coa3a (ENSACIG00000008410)	ENSACIG00000008395	vps25 (ENSACIG00000008383)
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00950000183002.C.c.b
Anabantaria	ANCESTRAL SPECIES	18	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000164872.a	ENSGT00940000171531
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000169341	ENSGT00940000167352
Climbing perch	MODERN SPECIES	10	TEKT3 (ENSATEG00000005114)	PMP22 (ENSATEG00000027322)	hs3st3b1b (ENSATEG00000005129)	cox10 (ENSATEG00000005134)	ENSATEG00000005178	ENSATEG00000005193	ENSATEG00000005307	PPP1R9B (ENSATEG00000005313) #19	ENSATEG00000005363 #18	col1a1b (ENSATEG00000005367) #17	ENSATEG00000005534 #15	ENSATEG00000005645	ENSATEG00000005661 #11	ENSATEG00000005686 #20	lsm12b (ENSATEG00000005705) #21	g6pc3 (ENSATEG00000005740) #22	ENSATEG00000005755	CNTD1 (ENSATEG00000005912)	coa3a (ENSATEG00000030168)	WNK4 (ENSATEG00000005954)	vps25 (ENSATEG00000025515)	ENSATEG00000006022	mfsd13a (ENSATEG00000006038)	SEMA4G (ENSATEG00000006087)	mrpl43 (ENSATEG00000006106)	twnk (ENSATEG00000006113)	LZTS2 (ENSATEG00000006154)	PDZD7 (ENSATEG00000006168)	ENSATEG00000006243	ENSATEG00000006258	ENSATEG00000029457
Siamese fighting fish	MODERN SPECIES	9	ENSBSLG00000011012	TEKT3 (ENSBSLG00000010986)	PMP22 (ENSBSLG00000010979)	hs3st3b1b (ENSBSLG00000010969)	cox10 (ENSBSLG00000010941)	ENSBSLG00000010931	ENSBSLG00000010827	ENSBSLG00000010793	ENSBSLG00000010656 #19	col1a1b (ENSBSLG00000005774) #17	retsatl (ENSBSLG00000005013) #15	ENSBSLG00000005001	TMEM101 (ENSBSLG00000004978) #11	ENSBSLG00000004946 #20	lsm12b (ENSBSLG00000004903) #21	g6pc3 (ENSBSLG00000004878) #22	TANC2 (ENSBSLG00000023263)	coa3a (ENSBSLG00000023143)	WNK4 (ENSBSLG00000023088)	ENSBSLG00000023055	mfsd13a (ENSBSLG00000023015)	lect2.1 (ENSBSLG00000023006)	ENSBSLG00000022970	SEMA4G (ENSBSLG00000022872)	mrpl43 (ENSBSLG00000022851)	twnk (ENSBSLG00000022837)	LZTS2 (ENSBSLG00000022819)	ENSBSLG00000022793	ENSBSLG00000022553	scn4aa (ENSBSLG00000022389)	ENSBSLG00000022101
Zig-zag eel	MODERN SPECIES	10	TEKT3 (ENSMAMG00000003733)	PMP22 (ENSMAMG00000028491)	hs3st3b1b (ENSMAMG00000026258)	cox10 (ENSMAMG00000003769)	ENSMAMG00000003796	ENSMAMG00000003815	ENSMAMG00000024496	PPP1R9B (ENSMAMG00000003964) #19	ENSMAMG00000003991 #18	col1a1b (ENSMAMG00000004042) #17	ENSMAMG00000004190 #15	ENSMAMG00000004244	ENSMAMG00000026138 #11	ENSMAMG00000024337 #20	lsm12b (ENSMAMG00000004279) #21	g6pc3 (ENSMAMG00000004299) #22	ENSMAMG00000004355	ENSMAMG00000004660	coa3a (ENSMAMG00000004688)	ENSMAMG00000004704	mfsd13a (ENSMAMG00000004731)	SEMA4G (ENSMAMG00000004769)	mrpl43 (ENSMAMG00000004808)	twnk (ENSMAMG00000004814)	LZTS2 (ENSMAMG00000004847)	ENSMAMG00000004882	ENSMAMG00000024514	ENSMAMG00000004943	ENSMAMG00000004996	scn4aa (ENSMAMG00000005014)	ENSMAMG00000005087
Carangaria	ANCESTRAL SPECIES	13	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00950000183002.C.c.b
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00950000183002.C.c.b
Seriola	ANCESTRAL SPECIES	1	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00940000155474.o.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT01050000245040	ENSGT00950000183002.C.c.b
Greater amberjack	MODERN SPECIES	27	TEKT3 (ENSSDUG00000013157)	PMP22 (ENSSDUG00000013149)	hs3st3b1b (ENSSDUG00000013144)	cox10 (ENSSDUG00000013109)	ENSSDUG00000013097	ENSSDUG00000013069	ENSSDUG00000013048	PPP1R9B (ENSSDUG00000012998) #19	ENSSDUG00000012955 #18	col1a1b (ENSSDUG00000012841) #17	retsatl (ENSSDUG00000012786) #15	ENSSDUG00000012771	TMEM101 (ENSSDUG00000012754) #11	ENSSDUG00000012743 #20	lsm12b (ENSSDUG00000012711) #21	g6pc3 (ENSSDUG00000012692) #22	TANC2 (ENSSDUG00000012604)	CNTD1 (ENSSDUG00000012586)	coa3a (ENSSDUG00000012575)	ENSSDUG00000012556	ENSSDUG00000012544	vps25 (ENSSDUG00000012527)	ARHGAP27 (ENSSDUG00000012501)	ENSSDUG00000012497	mfsd13a (ENSSDUG00000012446)	SEMA4G (ENSSDUG00000012363)	mrpl43 (ENSSDUG00000012344)	twnk (ENSSDUG00000012317)	LZTS2 (ENSSDUG00000012293)	ENSSDUG00000012288	PDZD7 (ENSSDUG00000012249)
Yellowtail amberjack	MODERN SPECIES	2773	TEKT3 (ENSSLDG00000012033)	PMP22 (ENSSLDG00000012019)	hs3st3b1b (ENSSLDG00000012008)	cox10 (ENSSLDG00000011994)	ENSSLDG00000011977	ENSSLDG00000011884	ENSSLDG00000011849	PPP1R9B (ENSSLDG00000011801) #19	ENSSLDG00000011773 #18	col1a1b (ENSSLDG00000008127) #17	retsatl (ENSSLDG00000007483) #15	gngt2b (ENSSLDG00000007459)	TMEM101 (ENSSLDG00000007439) #11	ENSSLDG00000007418 #20	lsm12b (ENSSLDG00000007404) #21	g6pc3 (ENSSLDG00000007377) #22	TANC2 (ENSSLDG00000007290)	CNTD1 (ENSSLDG00000007254)	coa3a (ENSSLDG00000007243)	ENSSLDG00000007216	vps25 (ENSSLDG00000007201)	ENSSLDG00000007142	mfsd13a (ENSSLDG00000007060)	SEMA4G (ENSSLDG00000006962)	mrpl43 (ENSSLDG00000006932)	twnk (ENSSLDG00000006906)	LZTS2 (ENSSLDG00000006891)	ENSSLDG00000006881	PDZD7 (ENSSLDG00000006863)	ENSSLDG00000006830	selenou1b (ENSSLDG00000006811)
Barramundi perch	MODERN SPECIES	38	TEKT3 (ENSLCAG00010014722)	PMP22 (ENSLCAG00010014728)	hs3st3b1b (ENSLCAG00010014732)	cox10 (ENSLCAG00010014738)	ENSLCAG00010014746	ENSLCAG00010014754	ENSLCAG00010014778	PPP1R9B (ENSLCAG00010014782) #19	ENSLCAG00010014791 #18	col1a1b (ENSLCAG00010014814) #17	retsatl (ENSLCAG00010014880) #15	gngt2b (ENSLCAG00010014888)	TMEM101 (ENSLCAG00010014894) #11	ENSLCAG00010014898 #20	lsm12b (ENSLCAG00010014902) #21	g6pc3 (ENSLCAG00010014905) #22	TANC2 (ENSLCAG00010015013)
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000167583	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00390000011938 #11	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.b	ENSGT00940000165336.a.a.a	ENSGT00940000177267
Turbot	MODERN SPECIES	9	etv4 (ENSSMAG00000008436)	meox1 (ENSSMAG00000035663)	SOST (ENSSMAG00000008429)	ENSSMAG00000008410	arl4d (ENSSMAG00000008394)	tmem106a (ENSSMAG00000008371)	nbr1a (ENSSMAG00000008345)	ENSSMAG00000008308	PPP1R9B (ENSSMAG00000022444) #19	ENSSMAG00000008289 #18	col1a1b (ENSSMAG00000008146) #17	ENSSMAG00000008130 #15	ENSSMAG00000025909	ENSSMAG00000008110 #11	lsm12b (ENSSMAG00000008089) #21	g6pc3 (ENSSMAG00000008080) #22	ENSSMAG00000007945	coa3a (ENSSMAG00000007917)	ENSSMAG00000007885	ENSSMAG00000007764	mfsd13a (ENSSMAG00000007717)	ENSSMAG00000007496	SEMA4G (ENSSMAG00000007452)	mrpl43 (ENSSMAG00000007436)	twnk (ENSSMAG00000007414)	LZTS2 (ENSSMAG00000007405)	ENSSMAG00000023672	PDZD7 (ENSSMAG00000007374)	ENSSMAG00000007343	ENSSMAG00000007333	ENSSMAG00000007330
Tongue sole	MODERN SPECIES	18	ENSCSEG00000009100	slc4a1b (ENSCSEG00000008936) #30	ngfrb (ENSCSEG00000008908)	ppp1cab (ENSCSEG00000008874)	pelo (ENSCSEG00000008807)	PAQR4 (ENSCSEG00000008794)	ENSCSEG00000008790	atp2a1l (ENSCSEG00000008688)	sult1st6 (ENSCSEG00000008665)	ENSCSEG00000008643	mto1 (ENSCSEG00000008587)	ENSCSEG00000008530	ENSCSEG00000008485	DOC2A (ENSCSEG00000008455)	lsm12b (ENSCSEG00000008434) #21	g6pc3 (ENSCSEG00000008422) #22	TANC2 (ENSCSEG00000008055)	CNTD1 (ENSCSEG00000008005)	coa3a (ENSCSEG00000008001)	WNK4 (ENSCSEG00000007964)	vps25 (ENSCSEG00000007910)	ENSCSEG00000007856	mfsd13a (ENSCSEG00000007828)	LASP1 (ENSCSEG00000007812)	ENSCSEG00000007795	plekhm1 (ENSCSEG00000007790)	ENSCSEG00000007784	ifnphi4 (ENSCSEG00000007766)	ENSCSEG00000007756	ENSCSEG00000007751	scn4aa (ENSCSEG00000007695)
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.b
Tetraodontidae	ANCESTRAL SPECIES	23	ENSGT00940000161435.a.a	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT00980000198953	ENSGT00940000165336.a.a.a	ENSGT00940000167352
Fugu	MODERN SPECIES		ENSTRUG00000031602	TEKT3 (ENSTRUG00000009763)	PMP22 (ENSTRUG00000030648)	hs3st3b1b (ENSTRUG00000028939)	cox10 (ENSTRUG00000009462)	ENSTRUG00000009368	ENSTRUG00000009358	ENSTRUG00000009314	PPP1R9B (ENSTRUG00000009156) #19	ENSTRUG00000009053 #18	col1a1b (ENSTRUG00000007520) #17	retsatl (ENSTRUG00000007302) #15	ENSTRUG00000032520	TMEM101 (ENSTRUG00000019702) #11	lsm12b (ENSTRUG00000007121) #21	g6pc3 (ENSTRUG00000031937) #22	TANC2 (ENSTRUG00000006868)	CNTD1 (ENSTRUG00000006767)	coa3a (ENSTRUG00000027823)	WNK4 (ENSTRUG00000023028)	vps25 (ENSTRUG00000006428)	ARHGAP27 (ENSTRUG00000005700)	mfsd13a (ENSTRUG00000005524)	SEMA4G (ENSTRUG00000004957)	mrpl43 (ENSTRUG00000026364)	twnk (ENSTRUG00000004763)	LZTS2 (ENSTRUG00000021658)	PDZD7 (ENSTRUG00000004457)	ENSTRUG00000025435	selenou1b (ENSTRUG00000004431)	ENSTRUG00000030171
Tetraodon	MODERN SPECIES	13	CDC42EP4 (ENSTNIG00000014450)	TEKT3 (ENSTNIG00000014449)	PMP22 (ENSTNIG00000014448)	hs3st3b1b (ENSTNIG00000014447)	cox10 (ENSTNIG00000014446)	ENSTNIG00000014445	ENSTNIG00000014444	prdm9 (ENSTNIG00000014443)	PPP1R9B (ENSTNIG00000014442) #19	SGCA (ENSTNIG00000014441) #18	col1a1b (ENSTNIG00000014440) #17	retsatl (ENSTNIG00000014439) #15	ENSTNIG00000014438	TMEM101 (ENSTNIG00000014437) #11	lsm12b (ENSTNIG00000014436) #21	g6pc3 (ENSTNIG00000014435) #22	TANC2 (ENSTNIG00000014434)	ENSTNIG00000014433	vps25 (ENSTNIG00000014431)	ENSTNIG00000014430	mfsd13a (ENSTNIG00000014429)	SEMA4G (ENSTNIG00000014428)	mrpl43 (ENSTNIG00000014427)	twnk (ENSTNIG00000014426)	LZTS2 (ENSTNIG00000014425)	PDZD7 (ENSTNIG00000014424)	selenou1b (ENSTNIG00000014423)	scn4aa (ENSTNIG00000014422)	ENSTNIG00000014421	ENSTNIG00000000742	ENSTNIG00000001092
Eupecaria_A	ANCESTRAL SPECIES	22	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.b
Ballan wrasse	MODERN SPECIES	35	TEKT3 (ENSLBEG00000027767)	PMP22 (ENSLBEG00000027780)	hs3st3b1b (ENSLBEG00000027788)	cox10 (ENSLBEG00000027797)	ENSLBEG00000027803	ENSLBEG00000027814	ENSLBEG00000027840	PPP1R9B (ENSLBEG00000027871) #19	SGCA (ENSLBEG00000027888) #18	col1a1b (ENSLBEG00000027905) #17	retsatl (ENSLBEG00000027967) #15	ENSLBEG00000027980	TMEM101 (ENSLBEG00000027986) #11	ENSLBEG00000027995 #20	lsm12b (ENSLBEG00000027999) #21	g6pc3 (ENSLBEG00000028008) #22	TANC2 (ENSLBEG00000028021)	CNTD1 (ENSLBEG00000028037)	coa3a (ENSLBEG00000028049)	ENSLBEG00000028057	vps25 (ENSLBEG00000028066)	ENSLBEG00000028075	mfsd13a (ENSLBEG00000028140)	SEMA4G (ENSLBEG00000028145)	mrpl43 (ENSLBEG00000028159)	twnk (ENSLBEG00000028164)	LZTS2 (ENSLBEG00000028175)	PDZD7 (ENSLBEG00000028185)	ENSLBEG00000028195	ENSLBEG00000028205	ENSLBEG00000028209
Eupecaria_B	ANCESTRAL SPECIES	22	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.b
Perciformes	ANCESTRAL SPECIES	9	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.b
Cottioidei	ANCESTRAL SPECIES	12	ENSGT00940000161435.a.a	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a	ENSGT00940000161631	ENSGT00940000167352
Lumpfish	MODERN SPECIES	10	CDC42EP4 (ENSCLMG00005006907)	TEKT3 (ENSCLMG00005006909)	PMP22 (ENSCLMG00005006912)	hs3st3b1b (ENSCLMG00005006915)	cox10 (ENSCLMG00005006917)	ENSCLMG00005006920	ENSCLMG00005006921	ENSCLMG00005006922	PPP1R9B (ENSCLMG00005006926) #19	SGCA (ENSCLMG00005006968) #18	ENSCLMG00005006996	retsatl (ENSCLMG00005009293) #15	ENSCLMG00005009387	TMEM101 (ENSCLMG00005009390) #11	lsm12b (ENSCLMG00005009391) #21	g6pc3 (ENSCLMG00005009392) #22	TANC2 (ENSCLMG00005009411)	WNK4 (ENSCLMG00005012423)	coa3a (ENSCLMG00005012429)	ARHGAP27 (ENSCLMG00005012430)	mfsd13a (ENSCLMG00005012433)	SEMA4G (ENSCLMG00005012500)	mrpl43 (ENSCLMG00005012501)	twnk (ENSCLMG00005012503)	LZTS2 (ENSCLMG00005012525)	PDZD7 (ENSCLMG00005012526)	ENSCLMG00005012527	selenou1b (ENSCLMG00005012528)	ENSCLMG00005012529	scn4aa (ENSCLMG00005012530)	ENSCLMG00005012531
Stickleback	MODERN SPECIES	5	SDK2 (ENSGACG00000003305)	CDC42EP4 (ENSGACG00000003319)	TEKT3 (ENSGACG00000003321)	ENSGACG00000003331	hs3st3b1b (ENSGACG00000003333)	cox10 (ENSGACG00000003334)	ENSGACG00000003340	ENSGACG00000003343	PPP1R9B (ENSGACG00000003345) #19	ENSGACG00000003356 #18	col1a1b (ENSGACG00000003361) #17	retsatl (ENSGACG00000003399) #15	ENSGACG00000003412	TMEM101 (ENSGACG00000003416) #11	lsm12b (ENSGACG00000003428) #21	g6pc3 (ENSGACG00000003434) #22	TANC2 (ENSGACG00000003442)	ENSGACG00000003455	vps25 (ENSGACG00000003463)	WNK4 (ENSGACG00000003470)	CNTD1 (ENSGACG00000003479)	mfsd13a (ENSGACG00000003486)	SEMA4G (ENSGACG00000003493)	mrpl43 (ENSGACG00000003498)	twnk (ENSGACG00000003504)	LZTS2 (ENSGACG00000003508)	PDZD7 (ENSGACG00000003511)	ENSGACG00000003518	scn4aa (ENSGACG00000003521)	ENSGACG00000003531	ENSGACG00000003536
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00950000182860.a.a.a.vb	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT01050000245040
Channel bull blenny	MODERN SPECIES	10	PMP22 (ENSCGOG00000014095)	hs3st3b1b (ENSCGOG00000014090)	cox10 (ENSCGOG00000014088)	ENSCGOG00000014074	ENSCGOG00000014047	ENSCGOG00000014042	PPP1R9B (ENSCGOG00000013991) #19	SGCA (ENSCGOG00000013985) #18	col1a1b (ENSCGOG00000009581) #17	retsatl (ENSCGOG00000009324) #15	ENSCGOG00000009314	TMEM101 (ENSCGOG00000009312) #11	ENSCGOG00000009310 #20	ENSCGOG00000009307 #20	lsm12b (ENSCGOG00000009286) #21	g6pc3 (ENSCGOG00000009284) #22	TANC2 (ENSCGOG00000006808)	ENSCGOG00000006721	coa3a (ENSCGOG00000006719)	WNK4 (ENSCGOG00000006702)	ENSCGOG00000006694	mfsd13a (ENSCGOG00000006561)	SEMA4G (ENSCGOG00000006539)	mrpl43 (ENSCGOG00000006536)	twnk (ENSCGOG00000006535)	LZTS2 (ENSCGOG00000006507)	ENSCGOG00000006502	PDZD7 (ENSCGOG00000006488)	selenou1b (ENSCGOG00000006478)	ENSCGOG00000006474	ENSCGOG00000006471
Pike perch	MODERN SPECIES	3	TEKT3 (ENSSLUG00000000792)	PMP22 (ENSSLUG00000000788)	hs3st3b1b (ENSSLUG00000000787)	cox10 (ENSSLUG00000000783)	ENSSLUG00000000780	ENSSLUG00000000769	ENSSLUG00000000758	PPP1R9B (ENSSLUG00000000733) #19	SGCA (ENSSLUG00000000725) #18	col1a1b (ENSSLUG00000000479) #17	retsatl (ENSSLUG00000000390) #15	ENSSLUG00000000386	TMEM101 (ENSSLUG00000000377) #11	ENSSLUG00000000376 #20	lsm12b (ENSSLUG00000000370) #21	g6pc3 (ENSSLUG00000000365) #22	TANC2 (ENSSLUG00000000185)	ENSSLUG00000000074	CNTD1 (ENSSLUG00000000066)	coa3a (ENSSLUG00000022490)	WNK4 (ENSSLUG00000022475)	vps25 (ENSSLUG00000022458)	ENSSLUG00000022448	ENSSLUG00000022438	mfsd13a (ENSSLUG00000022420)	SEMA4G (ENSSLUG00000022396)	mrpl43 (ENSSLUG00000022382)	twnk (ENSSLUG00000022376)	LZTS2 (ENSSLUG00000022373)	ENSSLUG00000022368	ENSSLUG00000022367
Eupecaria_C	ANCESTRAL SPECIES	23	ENSGT00950000182894.A.b.b	ENSGT00950000182696.B.a.a.a	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.b	ENSGT01050000245040
Gilthead seabream	MODERN SPECIES	12	PMP22 (ENSSAUG00010016692)	hs3st3b1b (ENSSAUG00010025243)	cox10 (ENSSAUG00010025242)	ENSSAUG00010025241	ENSSAUG00010025239	ENSSAUG00010025235	ENSSAUG00010025232	PPP1R9B (ENSSAUG00010025231) #19	ENSSAUG00010025229 #18	col1a1b (ENSSAUG00010025092) #17	retsatl (ENSSAUG00010025070) #15	ENSSAUG00010025068	TMEM101 (ENSSAUG00010025067) #11	ENSSAUG00010025066 #20	lsm12b (ENSSAUG00010025064) #21	g6pc3 (ENSSAUG00010025063) #22	TANC2 (ENSSAUG00010024577)	ENSSAUG00010024551	CNTD1 (ENSSAUG00010024550)	coa3a (ENSSAUG00010024549)	WNK4 (ENSSAUG00010024547)	vps25 (ENSSAUG00010024546)	ARHGAP27 (ENSSAUG00010024544)	mfsd13a (ENSSAUG00010024535)	SEMA4G (ENSSAUG00010024529)	mrpl43 (ENSSAUG00010024527)	twnk (ENSSAUG00010024526)	LZTS2 (ENSSAUG00010024525)	ENSSAUG00010024524	PDZD7 (ENSSAUG00010024522)	ENSSAUG00010024520
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	27	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00940000167583	ENSGT01100000263520.a.a.a.b.b	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a	ENSGT00940000169501	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00940000159871.b.a.a	ENSGT00390000016262	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00940000154078.a.a.a	ENSGT00950000183002.C.c.b	ENSGT01050000245040	ENSGT00940000165336.a.a.a
Large yellow croaker	MODERN SPECIES	488	hs3st3b1b (ENSLCRG00005021751)	cox10 (ENSLCRG00005021752)	ENSLCRG00005021753	ENSLCRG00005021754	ENSLCRG00005021761	ENSLCRG00005021762	ENSLCRG00005021764	PPP1R9B (ENSLCRG00005021766) #19	ENSLCRG00005021769 #18	col1a1b (ENSLCRG00005021781) #17	retsatl (ENSLCRG00005022259) #15	ENSLCRG00005022260	TMEM101 (ENSLCRG00005022261) #11	ENSLCRG00005022263 #20	lsm12b (ENSLCRG00005022264) #21	g6pc3 (ENSLCRG00005022265) #22	TANC2 (ENSLCRG00005022315)	ENSLCRG00005022999	ENSLCRG00005023002	ENSLCRG00005023003	coa3a (ENSLCRG00005023004)	ENSLCRG00005023005	mfsd13a (ENSLCRG00005023007)	SEMA4G (ENSLCRG00005023009)	mrpl43 (ENSLCRG00005023028)	twnk (ENSLCRG00005023030)	LZTS2 (ENSLCRG00005007499)	PDZD7 (ENSLCRG00005007501)	ENSLCRG00005007503	ENSLCRG00005007504	selenou1b (ENSLCRG00005007508)
European seabass	MODERN SPECIES	11	PMP22 (ENSDLAG00005027419)	hs3st3b1b (ENSDLAG00005001269)	cox10 (ENSDLAG00005035012)	ENSDLAG00005001457	ENSDLAG00005001461	ENSDLAG00005001489	ENSDLAG00005001502 #19	col1a1b (ENSDLAG00005001815) #17	SGCA (ENSDLAG00005031918) #18	ENSDLAG00005007351 #15	gngt2b (ENSDLAG00005007374)	ENSDLAG00005029548	ENSDLAG00005007390 #11	ENSDLAG00005007399 #20	lsm12b (ENSDLAG00005007405) #21	g6pc3 (ENSDLAG00005007412) #22	ENSDLAG00005007546	ENSDLAG00005032976	ENSDLAG00005011379	ENSDLAG00005011404	coa3a (ENSDLAG00005032771)	vps25 (ENSDLAG00005011561)	ENSDLAG00005033475	mfsd13a (ENSDLAG00005011608)	SEMA4G (ENSDLAG00005011653)	MRPL43 (ENSDLAG00005030232)	twnk (ENSDLAG00005011771)	LZTS2 (ENSDLAG00005011818)	PDZD7 (ENSDLAG00005011911)	ENSDLAG00005011947	ENSDLAG00005032598
Tiger tail seahorse	MODERN SPECIES	124											CACNA1G (ENSHCOG00000002206)	retsatl (ENSHCOG00000002159) #15	gngt2b (ENSHCOG00000002141)	TMEM101 (ENSHCOG00000002101) #11	lsm12b (ENSHCOG00000002094) #21	g6pc3 (ENSHCOG00000002083) #22	TANC2 (ENSHCOG00000002050)	foxk2a (ENSHCOG00000001977)	wdr45b (ENSHCOG00000001965)	ENSHCOG00000001957	ENSHCOG00000001945	kdelr2b (ENSHCOG00000001937)	mettl9 (ENSHCOG00000001930)	ccdc57 (ENSHCOG00000001918)	ENSHCOG00000001904	slc16a3b (ENSHCOG00000001897)	csnk1db (ENSHCOG00000001887)	c1qtnf1 (ENSHCOG00000001867)	RBFOX3 (ENSHCOG00000001863)	ENSHCOG00000001855	ENPP7 (ENSHCOG00000001851)
Pinecone sodierfish	MODERN SPECIES	10	BICRAL (ENSMMDG00005020892)	tbcc (ENSMMDG00005020894)	prph2a (ENSMMDG00005020898)	ENSMMDG00005020901	timm23a (ENSMMDG00005020904)	zgc:112285 (ENSMMDG00005020907)	ENSMMDG00005020913	nat9 (ENSMMDG00005020920)	col1a1b (ENSMMDG00005020927) #17	ENSMMDG00005020932	retsatl (ENSMMDG00005020941) #15	ENSMMDG00005020960	TMEM101 (ENSMMDG00005020961) #11	ENSMMDG00005020964 #20	lsm12b (ENSMMDG00005020965) #21	g6pc3 (ENSMMDG00005020968) #22	TANC2 (ENSMMDG00005021007)	coa3a (ENSMMDG00005021636)	ENSMMDG00005021639	vps25 (ENSMMDG00005021642)	ENSMMDG00005021650	mfsd13a (ENSMMDG00005021661)	SEMA4G (ENSMMDG00005021733)	mrpl43 (ENSMMDG00005021737)	twnk (ENSMMDG00005021739)	LZTS2 (ENSMMDG00005021742)	PDZD7 (ENSMMDG00005021744)	ENSMMDG00005021747	ENSMMDG00005021748	selenou1b (ENSMMDG00005021749)	ENSMMDG00005021751
Cod	MODERN SPECIES	9	map2k4b (ENSGMOG00000008589)	ENSGMOG00000025596	ENSGMOG00000014387	ENSGMOG00000036498	ENSGMOG00000034461	ENSGMOG00000027670	ENSGMOG00000001605	ENSGMOG00000031818	ENSGMOG00000015250	col1a1b (ENSGMOG00000015290) #17	ENSGMOG00000015391 #15	gngt2b (ENSGMOG00000032025)	ENSGMOG00000015408 #11	ENSGMOG00000015418 #20	lsm12b (ENSGMOG00000015449) #21	g6pc3 (ENSGMOG00000015462) #22	ENSGMOG00000015474	CNTD1 (ENSGMOG00000019322)	coa3a (ENSGMOG00000019316)	ENSGMOG00000035448	vps25 (ENSGMOG00000019296)	ENSGMOG00000029408	mfsd13a (ENSGMOG00000019548)	SEMA4G (ENSGMOG00000009878)	mrpl43 (ENSGMOG00000026481)	twnk (ENSGMOG00000030088)	LZTS2 (ENSGMOG00000031248)	PDZD7 (ENSGMOG00000009929)	ENSGMOG00000034703	CDHR1 (ENSGMOG00000008587)	ENSGMOG00000034198
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00950000182696.B.a.a.b.d	ENSGT00950000182894.A.b.b	ENSGT00940000163827.a.a.a.a.d	ENSGT00940000154768.A.a.g.b	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.f	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT00390000011938 #11	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a.k.a	ENSGT00940000155474.o.a	ENSGT00940000159871.b.a.a.k.b	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00970000196963	ENSGT00910000144305	ENSGT00940000166161	ENSGT00940000158427	ENSGT00530000063168.b	ENSGT00940000159781.a
Salmoninae	ANCESTRAL SPECIES	19	ENSGT00940000161435.a.a.c	ENSGT00950000182696.B.a.a.b.d.a	ENSGT00950000182894.A.b.b	ENSGT00940000154768.A.a.g.b.h.a	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h.c	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.f	ENSGT00940000158833.a.b.e #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.f #17	ENSGT00940000163871.a #15	ENSGT00990000204445.b	ENSGT00390000011938 #11	ENSGT00390000006956.a.c #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262.o	ENSGT00940000159871.b.a.a.k.b.b	ENSGT00390000014892.b	ENSGT00950000182860.a.a.a.ub.b.i	ENSGT00970000196963	ENSGT00910000144305	ENSGT00940000166161	ENSGT00940000158427.i	ENSGT00530000063168.b	ENSGT00940000159781.a.e	ENSGT00940000155172.o	ENSGT01030000235370
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00940000161131.a.b	ENSGT00950000182696.B.a.a.b.d.a	ENSGT00950000182894.A.b.b	ENSGT00940000154768.A.a.g.b.h.a	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h.c	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.f	ENSGT00940000158833.a.b.e #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.f #17	ENSGT00940000163871.a #15	ENSGT00990000204445.b	ENSGT00390000011938 #11	ENSGT00390000006956.a.c #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262.o	ENSGT00940000159871.b.a.a.k.b.b	ENSGT00390000014892.b	ENSGT00950000182860.a.a.a.ub.b.i	ENSGT00910000144305	ENSGT00940000166161	ENSGT00940000158427.i	ENSGT00530000063168.b	ENSGT00940000159781.a.e	ENSGT00940000155172.o	ENSGT01030000235370	ENSGT00550000075035.d.a
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000161131.a.b	ENSGT00950000182696.B.a.a.b.d.a	ENSGT00950000182894.A.b.b.p	ENSGT00940000154768.A.a.g.b.h.a	ENSGT00940000153771.A	ENSGT00940000154768.A.a.h.c	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.f	ENSGT00940000158833.a.b.e #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.f #17	ENSGT00940000163871.a #15	ENSGT00990000204445.b	ENSGT00390000011938 #11	ENSGT00390000006956.a.c #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262.o	ENSGT00940000159871.b.a.a.k.b.b	ENSGT00950000182860.a.a.a.ub.b.i	ENSGT00910000144305	ENSGT00940000166161	ENSGT00940000158427.i	ENSGT00530000063168.b	ENSGT00940000159781.a.e	ENSGT00940000155172.o	ENSGT01030000235370	ENSGT00550000075035.d.a	ENSGT00940000157474.d
River trout	MODERN SPECIES	1	PMP22 (ENSSTUG00000007561)	TEKT3 (ENSSTUG00000007567)	ENSSTUG00000007583	hs3st3b1b (ENSSTUG00000007610)	cox10 (ENSSTUG00000007617)	ENSSTUG00000007630	ENSSTUG00000007643	ENSSTUG00000007708	PPP1R9B (ENSSTUG00000007722) #19	SGCA (ENSSTUG00000007865) #18	col1a1b (ENSSTUG00000007914) #17	retsatl (ENSSTUG00000007985) #15	ENSSTUG00000008005	TMEM101 (ENSSTUG00000008014) #11	lsm12b (ENSSTUG00000008022) #21	g6pc3 (ENSSTUG00000008030) #22	TANC2 (ENSSTUG00000008253)	ENSSTUG00000012261	ENSSTUG00000012278	coa3a (ENSSTUG00000012362)	ENSSTUG00000012370	HLTF (ENSSTUG00000012461)	ENSSTUG00000013489	ppm1g (ENSSTUG00000013507)	fam120b (ENSSTUG00000013605)	dld (ENSSTUG00000013623)	phf10 (ENSSTUG00000013653)	ENSSTUG00000013761	psmb1 (ENSSTUG00000013772)	tbp (ENSSTUG00000013792)	rab4a (ENSSTUG00000001117)
Atlantic salmon	MODERN SPECIES	20	ENSSSAG00000088371	ENSSSAG00000111596	hs3st3b1b (ENSSSAG00000069910)	cox10 (ENSSSAG00000069915)	ENSSSAG00000096227	ENSSSAG00000069920	ENSSSAG00000112813	ENSSSAG00000069933	PPP1R9B (ENSSSAG00000069935) #19	ENSSSAG00000069941 #18	col1a1b (ENSSSAG00000069947) #17	ENSSSAG00000069962 #15	gngt2b (ENSSSAG00000069982)	ENSSSAG00000089939 #11	lsm12 (ENSSSAG00000069996) #21	g6pc3 (ENSSSAG00000094374) #22	ENSSSAG00000070121	ENSSSAG00000071692	CNTD1 (ENSSSAG00000116059)	coa3a (ENSSSAG00000087478)	WNK4 (ENSSSAG00000071707)	ENSSSAG00000071721	ENSSSAG00000071745	ENSSSAG00000072137	ppm1g (ENSSSAG00000072146)	fam120b (ENSSSAG00000072185)	dld (ENSSSAG00000072202)	phf10 (ENSSSAG00000072228)	ENSSSAG00000072311	PSMB1 (ENSSSAG00000072320)	tbp (ENSSSAG00000072329)
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000161131.a.b	ENSGT00950000182696.B.a.a.b.d.a	ENSGT00950000182894.A.b.b	ENSGT00940000154768.A.a.g.b.h.a	ENSGT00940000153771.A.l	ENSGT00940000154768.A.a.h.c	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.f	ENSGT00940000158833.a.b.e #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.f #17	ENSGT00940000163871.a #15	ENSGT00990000204445.b	ENSGT00390000011938 #11	ENSGT00390000006956.a.c #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262.o	ENSGT00940000159871.b.a.a.k.b.b	ENSGT00390000014892.b	ENSGT00950000182860.a.a.a.ub.b.i	ENSGT00910000144305	ENSGT00940000166161	ENSGT00940000158427.i	ENSGT00530000063168.b	ENSGT00940000159781.a.e	ENSGT00940000155172.o	ENSGT01030000235370	ENSGT00550000075035.d.a
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000161131.a.b	ENSGT00950000182696.B.a.a.b.d.a	ENSGT00950000182894.A.b.b	ENSGT00940000154768.A.a.g.b.h.a	ENSGT00940000153771.A.l	ENSGT00940000154768.A.a.h.c	ENSGT00940000158003	ENSGT00950000183052.b.c.b.a.f	ENSGT00940000158833.a.b.e #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.f #17	ENSGT00940000163871.a #15	ENSGT00990000204445.b	ENSGT00390000011938 #11	ENSGT00390000006956.a.c #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.a	ENSGT00530000063836.b	ENSGT00440000033966	ENSGT00390000016262.o	ENSGT00940000159871.b.a.a.k.b.b	ENSGT00390000014892.b	ENSGT00950000182860.a.a.a.ub.b.i	ENSGT00910000144305	ENSGT00940000166161	ENSGT00940000158427.i	ENSGT00530000063168.b	ENSGT00940000159781.a.e	ENSGT00940000155172.o	ENSGT01030000235370	ENSGT00550000075035.d.a
Coho salmon	MODERN SPECIES	17	PMP22 (ENSOKIG00005007176)	ENSOKIG00005007190	hs3st3b1b (ENSOKIG00005007202)	cox10 (ENSOKIG00005007208)	ENSOKIG00005007217	ENSOKIG00005007220	ENSOKIG00005007232	ENSOKIG00005007258	PPP1R9B (ENSOKIG00005007276) #19	SGCA (ENSOKIG00005007309) #18	col1a1b (ENSOKIG00005007321) #17	ENSOKIG00005007346	ENSOKIG00005007350	TMEM101 (ENSOKIG00005007358) #11	lsm12b (ENSOKIG00005007369) #21	g6pc3 (ENSOKIG00005007384) #22	TANC2 (ENSOKIG00005007448)	ENSOKIG00005008301	ENSOKIG00005008344	coa3a (ENSOKIG00005008529)	ENSOKIG00005008580	HLTF (ENSOKIG00005008638)	ppm1g (ENSOKIG00005008804)	fam120b (ENSOKIG00005008877)	dld (ENSOKIG00005008898)	phf10 (ENSOKIG00005008938)	ENSOKIG00005009120	PSMB1 (ENSOKIG00005009134)	tbp (ENSOKIG00005009143)	rhoua (ENSOKIG00005009151)	rab4a (ENSOKIG00005009161)
Chinook salmon	MODERN SPECIES	17	ENSOTSG00005008061	PMP22 (ENSOTSG00005008063)	TEKT3 (ENSOTSG00005008064)	ENSOTSG00005008066	cox10 (ENSOTSG00005008067)	ENSOTSG00005008068	ENSOTSG00005008070	ENSOTSG00005008071	PPP1R9B (ENSOTSG00005008072) #19	SGCA (ENSOTSG00005008074) #18	col1a1b (ENSOTSG00005008078) #17	retsatl (ENSOTSG00005008090) #15	ENSOTSG00005008092	TMEM101 (ENSOTSG00005008093) #11	lsm12b (ENSOTSG00005008094) #21	g6pc3 (ENSOTSG00005008095) #22	TANC2 (ENSOTSG00005008096)	ENSOTSG00005008940	CNTD1 (ENSOTSG00005008941)	coa3a (ENSOTSG00005008943)	ENSOTSG00005008945	vps25 (ENSOTSG00005008946)	ENSOTSG00005008947	HLTF (ENSOTSG00005002880)	ENSOTSG00005004118	ppm1g (ENSOTSG00005004120)	fam120b (ENSOTSG00005004121)	dld (ENSOTSG00005004122)	phf10 (ENSOTSG00005004132)	psmb1 (ENSOTSG00005004203)	tbp (ENSOTSG00005004208)
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000040051	ENSOMYG00000040055	ENSOMYG00000053922	hs3st3b1b (ENSOMYG00000040063)	cox10 (ENSOMYG00000040068)	ENSOMYG00000040070	ENSOMYG00000040085	ENSOMYG00000040109	PPP1R9B (ENSOMYG00000040124) #19	ENSOMYG00000040142 #18	col1a1b (ENSOMYG00000040194) #17	ENSOMYG00000040211 #15	ENSOMYG00000040216	ENSOMYG00000040219 #11	lsm12b (ENSOMYG00000040224) #21	g6pc3 (ENSOMYG00000040231) #22	ENSOMYG00000040373	ENSOMYG00000040629	ENSOMYG00000040648	ENSOMYG00000040663	coa3a (ENSOMYG00000032396)	ENSOMYG00000050187	ENSOMYG00000040680	ENSOMYG00000040735	ENSOMYG00000040938	ppm1g (ENSOMYG00000040951)	fam120b (ENSOMYG00000040986)	dld (ENSOMYG00000040997)	phf10 (ENSOMYG00000041031)	ENSOMYG00000041063	PSMB1 (ENSOMYG00000041069)
Huchen	MODERN SPECIES	867											ENSHHUG00000009101	retsatl (ENSHHUG00000009065) #15	ENSHHUG00000009055	TMEM101 (ENSHHUG00000009050) #11	lsm12b (ENSHHUG00000009024) #21	g6pc3 (ENSHHUG00000009014) #22	TANC2 (ENSHHUG00000008702)	ENSHHUG00000008680	CNTD1 (ENSHHUG00000008674)	coa3a (ENSHHUG00000008670)	ENSHHUG00000008650	ENSHHUG00000008635	ENSHHUG00000008632	ENSHHUG00000008631	vps25 (ENSHHUG00000008625)	ENSHHUG00000008612	ENSHHUG00000008584	HLTF (ENSHHUG00000008450)	ENSHHUG00000008439
Northern pike	MODERN SPECIES	4	PMP22 (ENSELUG00000030148)	TEKT3 (ENSELUG00000016180)	slc6a11a (ENSELUG00000016152)	hs3st3b1b (ENSELUG00000016102)	cox10 (ENSELUG00000016089)	ENSELUG00000016068	ENSELUG00000016039	ENSELUG00000000601	PPP1R9B (ENSELUG00000015912) #19	SGCA (ENSELUG00000015858) #18	col1a1b (ENSELUG00000015762) #17	retsatl (ENSELUG00000015589) #15	gngt2b (ENSELUG00000015568)	TMEM101 (ENSELUG00000015554) #11	lsm12b (ENSELUG00000015538) #21	g6pc3 (ENSELUG00000015510) #22	TANC2 (ENSELUG00000015455)	CNTD1 (ENSELUG00000015321)	coa3a (ENSELUG00000029400)	WNK4 (ENSELUG00000015307)	vps25 (ENSELUG00000015272)	ENSELUG00000015245	ENSELUG00000031579	HLTF (ENSELUG00000015109)	ENSELUG00000015059	ppm1g (ENSELUG00000015032)	fam120b (ENSELUG00000014975)	dld (ENSELUG00000014957)	phf10 (ENSELUG00000014927)	psmb1 (ENSELUG00000014893)	tbp (ENSELUG00000014852)
Otomorpha	ANCESTRAL SPECIES	45	ENSGT01090000260005.a.b.a.a	ENSGT00940000157539	ENSGT00940000164208	ENSGT00390000017328.a.b	ENSGT00390000016438	ENSGT00940000160279.g	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000155111	ENSGT00510000050089.a.b	ENSGT00730000111991	ENSGT00940000154363.B	ENSGT00940000167352	ENSGT00940000166534	ENSGT01030000234570.d.b.a.b.b.a.b	ENSGT00530000063688.b.nb.a
Clupeiformes	ANCESTRAL SPECIES	236	ENSGT00940000154352.A	ENSGT00940000165576.b.b.b	ENSGT01090000260005.a.b.a.a	ENSGT00940000157539	ENSGT00940000164208	ENSGT00390000017328.a.b	ENSGT00390000016438	ENSGT00940000167583	ENSGT00940000158833.a.b #19	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.c #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000155111	ENSGT00940000156584.e.a.d #17
Denticle herring	MODERN SPECIES	18	ENSDCDG00000020796	ENSDCDG00000021061	ENSDCDG00000032157	ENSDCDG00000032158	med24 (ENSDCDG00000032180)	ENSDCDG00000032218	ENSDCDG00000032221	prdm9 (ENSDCDG00000032225)	PPP1R9B (ENSDCDG00000032232) #19	ENSDCDG00000032263 #18	col1a1b (ENSDCDG00000032291) #17	retsatl (ENSDCDG00000033184) #15	gngt2b (ENSDCDG00000033192)	TMEM101 (ENSDCDG00000033195) #11	lsm12b (ENSDCDG00000033199) #21	g6pc3 (ENSDCDG00000033201) #22	TANC2 (ENSDCDG00000033212)	WNK4 (ENSDCDG00000033269)	coa3a (ENSDCDG00000033271)	ENSDCDG00000033273	plekhm1 (ENSDCDG00000033275)	ENSDCDG00000033277	ENSDCDG00000033279 #17	ENSDCDG00000033282	GPR137B (ENSDCDG00000033285)	NID1 (ENSDCDG00000033307)	GNG4 (ENSDCDG00000033467)	b3galnt2 (ENSDCDG00000033468)	ggps1 (ENSDCDG00000033469)	ARID4B (ENSDCDG00000033474)	tomm20a (ENSDCDG00000033481)
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000007864	ENSCHAG00000007879 #17	ENSCHAG00000007983	ENSCHAG00000008033	ENSCHAG00000008057	plekhm1 (ENSCHAG00000008070)	ENSCHAG00000008092	ENSCHAG00000008104	ENSCHAG00000008116	ENSCHAG00000008188	ENSCHAG00000008289	vps25 (ENSCHAG00000008387)	ENSCHAG00000008399	coa3a (ENSCHAG00000008436)	ENSCHAG00000008439	g6pc3 (ENSCHAG00000008447) #22	TANC2 (ENSCHAG00000008660)	retsatl (ENSCHAG00000013192) #15	ENSCHAG00000013208	ENSCHAG00000002558	ENSCHAG00000003442	ENSCHAG00000003467	ENSCHAG00000003508	ENSCHAG00000003818	ENSCHAG00000003836	ENSCHAG00000003870	ENSCHAG00000003888	ENSCHAG00000003924	ENSCHAG00000003930	ENSCHAG00000003955	ENSCHAG00000003987
Otophysi	ANCESTRAL SPECIES	63	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b	ENSGT00940000166249	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00390000016049	ENSGT01010000222313.A.b.b.a.a.b.b	ENSGT00940000158525.t	ENSGT00940000159991.B	ENSGT00940000160506.a	ENSGT00390000003590	ENSGT00940000160732	ENSGT00390000006265.a	ENSGT00390000017900	ENSGT00930000151040.a.a
Characiphysae	ANCESTRAL SPECIES	72	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b	ENSGT00940000166249	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00390000016049	ENSGT01010000222313.A.b.b.a.a.b.b	ENSGT00940000158525.t	ENSGT00940000159991.B	ENSGT00940000160506.a	ENSGT00390000003590	ENSGT00940000160732.c	ENSGT00390000006265.a	ENSGT00390000017900	ENSGT00930000151040.a.a
Channel catfish	MODERN SPECIES	4	ENSIPUG00000015371	scn4a (ENSIPUG00000015260)	cd79b (ENSIPUG00000015195)	ENSIPUG00000015181	plekhm1 (ENSIPUG00000015146)	ENSIPUG00000015119	ENSIPUG00000015035 #18	col1a1b (ENSIPUG00000014939) #17	ENSIPUG00000014906 #15	ENSIPUG00000014892	ENSIPUG00000014874 #15	ENSIPUG00000014859 #15	GNGT2 (ENSIPUG00000014848)	Tmem101 (ENSIPUG00000014829) #11	lsm12 (ENSIPUG00000014800) #21	g6pc3 (ENSIPUG00000014752) #22	TANC2 (ENSIPUG00000014451)	cntd1 (ENSIPUG00000014395)	coa3a (ENSIPUG00000014387)	wnk4 (ENSIPUG00000014346)	vps25 (ENSIPUG00000014332)	pagr1 (ENSIPUG00000014316)	TLCD3B (ENSIPUG00000014305)	MAZ (ENSIPUG00000014292)	ENSIPUG00000014232	fam20a (ENSIPUG00000014179)	PRKAR1A (ENSIPUG00000014106)	zdhhc16b (ENSIPUG00000014069)	mms19 (ENSIPUG00000014011)	ubtd1 (ENSIPUG00000014003)	antxrl (ENSIPUG00000013842)
Characiphysae_b	ANCESTRAL SPECIES	80	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b	ENSGT00940000166249	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00390000016049	ENSGT01010000222313.A.b.b.a.a.b.b	ENSGT00940000158525.t	ENSGT00940000159991.B	ENSGT00940000160506.a	ENSGT00390000003590	ENSGT00940000160732.c	ENSGT00390000006265.a	ENSGT00390000017900	ENSGT00930000151040.a.a
Electric eel	MODERN SPECIES	86	zdhhc16b (ENSEEEG00000003577)	prkar1ab (ENSEEEG00000003592)	fam20a (ENSEEEG00000003760)	ENSEEEG00000003775	LRRC45 (ENSEEEG00000003778)	rac3b (ENSEEEG00000003791)	dcxr (ENSEEEG00000003794)	rfng (ENSEEEG00000003798)	SGCA (ENSEEEG00000003870) #18	col1a1b (ENSEEEG00000003885) #17	ENSEEEG00000004046 #15	ENSEEEG00000004071	TMEM101 (ENSEEEG00000004075) #11	ENSEEEG00000004076	lsm12b (ENSEEEG00000004079) #21	g6pc3 (ENSEEEG00000004084) #22	TANC2 (ENSEEEG00000004097)	CNTD1 (ENSEEEG00000004251)	coa3a (ENSEEEG00000004253)	ENSEEEG00000004254	vps25 (ENSEEEG00000004255)	pagr1 (ENSEEEG00000004256)	TLCD3B (ENSEEEG00000004257)	ENSEEEG00000004259	ENSEEEG00000004260	ENSEEEG00000004261
Characoidei	ANCESTRAL SPECIES	70	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b	ENSGT00940000166249	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a	ENSGT00390000014892	ENSGT00390000016049	ENSGT01010000222313.A.b.b.a.a.b.b	ENSGT00940000158525.t	ENSGT00940000159991.B	ENSGT00940000160506.a	ENSGT00390000003590	ENSGT00940000160732.c	ENSGT00390000006265.a	ENSGT00390000017900	ENSGT00930000151040.a.a
Red-bellied piranha	MODERN SPECIES	36	DNAH7 (ENSPNAG00000027991)	slc39a10 (ENSPNAG00000027743)	tmeff2a (ENSPNAG00000027715)	cavin2a (ENSPNAG00000004789)	nabp1a (ENSPNAG00000005311)	ftcdnl1 (ENSPNAG00000027657)	zgc:153521 (ENSPNAG00000027642)	stk17b (ENSPNAG00000027635)	HECW2 (ENSPNAG00000005274)	ENSPNAG00000005902 #15	ENSPNAG00000027481 #15	gngt2b (ENSPNAG00000006322)	TMEM101 (ENSPNAG00000027198) #11	ENSPNAG00000027180 #20	lsm12b (ENSPNAG00000004186) #21	g6pc3 (ENSPNAG00000027123) #22	TANC2 (ENSPNAG00000004166)	CNTD1 (ENSPNAG00000026535)	ENSPNAG00000007079	coa3a (ENSPNAG00000004062)	WNK4 (ENSPNAG00000004057)	vps25 (ENSPNAG00000026463)	pagr1 (ENSPNAG00000026449)	TLCD3B (ENSPNAG00000026441)	ENSPNAG00000004042	ENSPNAG00000026249	cabp5a (ENSPNAG00000024372)	nif3l1 (ENSPNAG00000024332)	ENSPNAG00000024322	tbx6 (ENSPNAG00000003821)	zgc:92040 (ENSPNAG00000024212)
Mexicana tetra	MODERN SPECIES	19	tmem184ba (ENSAMXG00000008665)	maff (ENSAMXG00000008651)	tomm22 (ENSAMXG00000030273)	dmc1 (ENSAMXG00000008643)	gspt1 (ENSAMXG00000008638)	ENSAMXG00000041002	rsl1d1 (ENSAMXG00000008624)	ENSAMXG00000025874	ENSAMXG00000041412 #15	ENSAMXG00000035123 #15	ENSAMXG00000002840 #15	gngt2b (ENSAMXG00000037787)	TMEM101 (ENSAMXG00000041583) #11	ENSAMXG00000040829 #20	lsm12b (ENSAMXG00000032952) #21	g6pc3 (ENSAMXG00000014484) #22	TANC2 (ENSAMXG00000014197)	coa3a (ENSAMXG00000031104)	ENSAMXG00000020841	vps25 (ENSAMXG00000038568)	pagr1 (ENSAMXG00000042357)	TLCD3B (ENSAMXG00000034466)	ENSAMXG00000020861	TAOK2 (ENSAMXG00000037898)	cabp5a (ENSAMXG00000020870)	nif3l1 (ENSAMXG00000020876)	ENSAMXG00000020890	tbx6 (ENSAMXG00000009333)	zgc:92040 (ENSAMXG00000020919)	eif3c (ENSAMXG00000020949)	ppp4cb (ENSAMXG00000020968)
Cyprinoidei	ANCESTRAL SPECIES	29	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b	ENSGT00940000166249	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p	ENSGT00390000011938 #11	ENSGT00940000155311.A.b #20	ENSGT00390000006956.a.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000155474.o	ENSGT00390000014892	ENSGT00390000016049	ENSGT01010000222313.A.b.b.a.a.b.b	ENSGT00940000158525.t	ENSGT00940000159991.B	ENSGT00940000160506.a	ENSGT00390000003590	ENSGT00940000160732	ENSGT00390000006265.a	ENSGT00390000017900	ENSGT00930000151040.a.a
Cyprininae	ANCESTRAL SPECIES	5	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b.x	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.a.a #17	ENSGT00940000156584.e.a.b #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p.a	ENSGT00390000011938.a #11	ENSGT00940000155311.A.b.a #20	ENSGT00390000006956.a.a.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.c	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a.d	ENSGT00390000014892	ENSGT00390000016049.g	ENSGT01010000222313.A.b.b.a.a.b.b	ENSGT00940000158525.t	ENSGT00940000159991.B.c	ENSGT00940000160506.a.c	ENSGT00940000160732.b	ENSGT00390000006265.a	ENSGT00390000017900.w	ENSGT00930000151040.a.a	ENSGT00940000167101
Cyprininae_a	ANCESTRAL SPECIES	14	ENSGT00940000155032.l	ENSGT00940000155148.a.b	ENSGT00950000182951.A.b.x	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a.a.a #17	ENSGT00940000156584.e.a.b #17	ENSGT00940000163871.a.c #15	ENSGT01100000263525.b.a.p.a	ENSGT00390000011938.a #11	ENSGT00940000155311.A.b.a #20	ENSGT00390000006956.a.a.a #21	ENSGT00950000183150.b #22	ENSGT00940000156447.a.a.c	ENSGT00440000033966	ENSGT00390000016262	ENSGT00940000159871.b.a.a.d	ENSGT00390000016049.g	ENSGT00940000158525.t	ENSGT00940000159991.B.c	ENSGT00940000160506.a.c	ENSGT00940000160732.b	ENSGT00390000006265.a	ENSGT00390000017900.w	ENSGT00930000151040.a.a.a	ENSGT00950000182987.c.a.a.lb.g.a	ENSGT00940000154838.B.i.b.b	ENSGT00940000157421.d
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	800						LRRC45 (ENSSGRG00000030007)	dcxr (ENSSGRG00000029992)	rfng (ENSSGRG00000029985)	ENSSGRG00000029984 #18	col1a1b (ENSSGRG00000029961) #17	ENSSGRG00000029960 #15	gngt2b (ENSSGRG00000029959)	TMEM101 (ENSSGRG00000029958) #11	ENSSGRG00000029957 #20	lsm12b (ENSSGRG00000029952) #21	g6pc3 (ENSSGRG00000029951) #22	TANC2 (ENSSGRG00000028618)	CNTD1 (ENSSGRG00000028592)	coa3a (ENSSGRG00000028591)	ENSSGRG00000028589	vps25 (ENSSGRG00000028587)	pagr1 (ENSSGRG00000028586)	ENSSGRG00000028584	TAOK2 (ENSSGRG00000028286)	cabp5a (ENSSGRG00000028284)	nif3l1 (ENSSGRG00000028283)	GDPD3 (ENSSGRG00000028282)	tbx6 (ENSSGRG00000028281)	zgc:92040 (ENSSGRG00000028280)	eif3c (ENSSGRG00000027564)	ppp4cb (ENSSGRG00000027007)
Golden-line barbel	MODERN SPECIES	5214																ENSSGRG00000004383 #22
Common carp reference	MODERN SPECIES	44	prkar1ab (ENSCCRG00000006259)	ENSCCRG00000006014	ENSCCRG00000018190	LRRC45 (ENSCCRG00000018185)	rac3b (ENSCCRG00000018173)	dcxr (ENSCCRG00000073534)	rfng (ENSCCRG00000018040)	ENSCCRG00000018073 #18	col1a1b (ENSCCRG00000061457) #17	ENSCCRG00000072368	gngt2b (ENSCCRG00000057832)	ENSCCRG00000018028 #15	ENSCCRG00000082856 #11	ENSCCRG00000018024 #20	lsm12b (ENSCCRG00000018019) #21	g6pc3 (ENSCCRG00000063469) #22	ENSCCRG00000003193	ENSCCRG00000073735	pagr1 (ENSCCRG00000074237)	ENSCCRG00000064007	ENSCCRG00000018179	ENSCCRG00000061172	cabp5a (ENSCCRG00000003035)	nif3l1 (ENSCCRG00000003053)	ENSCCRG00000012472	tbx6 (ENSCCRG00000012493)	eif3c (ENSCCRG00000012533)	ppp4cb (ENSCCRG00000059069)	aldoab (ENSCCRG00000064750)	ENSCCRG00000079323	ENSCCRG00000057221
Goldfish	MODERN SPECIES	30	prkar1ab (ENSCARG00000019326)	FAM20A (ENSCARG00000019050)	ENSCARG00000019013	ENSCARG00000019010	LRRC45 (ENSCARG00000018916)	rac3b (ENSCARG00000018883)	dcxr (ENSCARG00000018871)	rfng (ENSCARG00000018842)	ENSCARG00000018835 #18	col1a1b (ENSCARG00000009049) #17	ENSCARG00000008640 #15	gngt2b (ENSCARG00000008630)	TMEM101 (ENSCARG00000008620) #11	ENSCARG00000008608 #20	ENSCARG00000008602 #21	g6pc3 (ENSCARG00000008575) #22	TANC2 (ENSCARG00000008302)	ENSCARG00000008251	coa3a (ENSCARG00000008245)	WNK4 (ENSCARG00000008214)	pagr1 (ENSCARG00000008202)	TLCD3B (ENSCARG00000008140)	ENSCARG00000008102	TAOK2 (ENSCARG00000007795)	cabp5a (ENSCARG00000007762)	nif3l1 (ENSCARG00000007751)	ENSCARG00000007702	tbx6 (ENSCARG00000007674)	eif3c (ENSCARG00000007642)	ppp4cb (ENSCARG00000007607)	ENSCARG00000007582
Zebrafish	MODERN SPECIES	3	mms19 (ENSDARG00000079067)	zdhhc16b (ENSDARG00000015989)	prkar1ab (ENSDARG00000101755)	fam20a (ENSDARG00000079486)	ENSDARG00000096532	LRRC45 (ENSDARG00000014005)	rac3b (ENSDARG00000020795)	dcxr (ENSDARG00000079271)	rfng (ENSDARG00000019746)	ENSDARG00000074156 #18	col1a1b (ENSDARG00000035809) #17	ENSDARG00000099525 #15	gngt2b (ENSDARG00000103543)	tmem101 (ENSDARG00000114508) #11	lsm12b (ENSDARG00000109510) #21	g6pc3 (ENSDARG00000020371) #22	TANC2 (ENSDARG00000107441)	coa3a (ENSDARG00000100585)	ENSDARG00000111945	vps25 (ENSDARG00000059079)	pagr1 (ENSDARG00000076966)	TLCD3B (ENSDARG00000074564)	ENSDARG00000063555	ENSDARG00000100620	cabp5a (ENSDARG00000002576)	nif3l1 (ENSDARG00000045249)	ENSDARG00000006944	tbx6 (ENSDARG00000011785)	zgc:92040 (ENSDARG00000021154)	eif3c (ENSDARG00000016443)	ppp4cb (ENSDARG00000076439)
Osteoglossiformes	ANCESTRAL SPECIES	43	ENSGT00940000159914	ENSGT00390000018386	ENSGT00940000165576.a.b	ENSGT00940000157539	ENSGT00940000164208	ENSGT00940000153653.a.a.a	ENSGT00390000017328	ENSGT00390000016438	ENSGT00940000160279	ENSGT00390000005672.a.a #18	ENSGT00940000156584.e.a #17	ENSGT00940000163871.a #15	ENSGT01100000263525.b.a.j	ENSGT00390000011938 #11	ENSGT00390000006956.c #21	ENSGT00950000183150.b #22	ENSGT00940000160534 #23	ENSGT00950000183197.a	ENSGT00940000156447.a.b	ENSGT00940000156447.a.a	ENSGT00440000033966	ENSGT00390000014892	ENSGT00940000159871.b.a.b.b	ENSGT00390000016262	ENSGT00950000182860.a.a.a.ub.b	ENSGT00940000155111	ENSGT00940000154363.B	ENSGT00940000167352	ENSGT01100000264459	ENSGT00940000166534	ENSGT01030000234570.d.b.a.b.b.a.a.b
P. kingsleyae	MODERN SPECIES	181	dlx4b (ENSPKIG00000021603)	ENSPKIG00000021578	kat7b (ENSPKIG00000021511)	csf3a (ENSPKIG00000021465)	med24 (ENSPKIG00000021411)	SAMD14 (ENSPKIG00000021388)	ENSPKIG00000021367	ENSPKIG00000021334	PPP1R9B (ENSPKIG00000021274) #19	SGCA (ENSPKIG00000021231) #18	col1a1b (ENSPKIG00000021151) #17	retsatl (ENSPKIG00000021116) #15	gngt2a (ENSPKIG00000021106)	TMEM101 (ENSPKIG00000021086) #11	lsm12b (ENSPKIG00000021058) #21	g6pc3 (ENSPKIG00000021038) #22	HDAC5 (ENSPKIG00000020952) #23	cyb561 (ENSPKIG00000020881)	ENSPKIG00000020848
Asian bonytongue	MODERN SPECIES	18														TMEM101 (ENSSFOG00015032255) #11	lsm12b (ENSSFOG00015028951) #21	g6pc3 (ENSSFOG00015009580) #22	HDAC5 (ENSSFOG00015009531) #23	cyb561 (ENSSFOG00015009517)	TANC2 (ENSSFOG00015024414)	ENSSFOG00015009455	vps25 (ENSSFOG00015009436)	ENSSFOG00015009378	coa3a (ENSSFOG00015009349)	ARHGAP27 (ENSSFOG00015009227)	plekhm1 (ENSSFOG00015009202)	ENSSFOG00015009185	ENSSFOG00015009177	scn4aa (ENSSFOG00015009051)	ENSSFOG00015020849	ghrhr2 (ENSSFOG00015008984)	myl4 (ENSSFOG00015008956)
Spotted gar	MODERN SPECIES	653	nsfa (ENSLOCG00000012959)	wnt3 (ENSLOCG00000012996)	ormdl3 (ENSLOCG00000012999)	ENSLOCG00000013003	thraa (ENSLOCG00000013012)	ENSLOCG00000013020	ENSLOCG00000013033 #18	col1a1b (ENSLOCG00000013046) #17	ENSLOCG00000013049 #15	gngt2a (ENSLOCG00000013057)	ENSLOCG00000013059	TMEM101 (ENSLOCG00000013062) #11	nags (ENSLOCG00000013066) #12	ENSLOCG00000013074 #20	lsm12b (ENSLOCG00000013079) #21	g6pc3 (ENSLOCG00000013084) #22	ENSLOCG00000013093	tut1 (ENSLOCG00000013105)	pyya (ENSLOCG00000013111)	mpp2a (ENSLOCG00000013118) #14	ENSLOCG00000013130 #15	abi3a (ENSLOCG00000013134)	ARHGAP27 (ENSLOCG00000013141)	plekhm1 (ENSLOCG00000013146)	ifnphi1 (ENSLOCG00000013155)	ENSLOCG00000013167	ENSLOCG00000013172	ifnphi2 (ENSLOCG00000013177)	rdm1 (ENSLOCG00000013179)	gh1 (ENSLOCG00000013185)	ENSLOCG00000013192
Reedfish	MODERN SPECIES	5	kat7b (ENSECRG00000017085)	dlx4b (ENSECRG00000017047)	itga3b (ENSECRG00000013495)	pdk2b (ENSECRG00000013026)	SAMD14 (ENSECRG00000012989)	ENSECRG00000012941	ENSECRG00000012907	SGCA (ENSECRG00000012891) #18	col1a1b (ENSECRG00000012828) #17	gngt2a (ENSECRG00000012799)	ENSECRG00000012775	TMEM101 (ENSECRG00000012752) #11	nags (ENSECRG00000012734) #12	ENSECRG00000012714 #20	lsm12b (ENSECRG00000012692) #21	g6pc3 (ENSECRG00000012680) #22	HDAC5 (ENSECRG00000012646) #23	tut1 (ENSECRG00000012616)	ENSECRG00000012595	ENSECRG00000012577	mpp2a (ENSECRG00000012535) #14	retsatl (ENSECRG00000012503) #15	ENSECRG00000012452	ccdc103 (ENSECRG00000012425)	ENSECRG00000012399	cyb561 (ENSECRG00000012372)	TANC2 (ENSECRG00000012277)	ENSECRG00000012217	ENSECRG00000012196	vps25 (ENSECRG00000012183)	WNK4 (ENSECRG00000012151)