Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000155594 #7	ENSGT00940000154025.a #8	ENSGT00390000010763 #9	ENSGT00940000159342 #10	ENSGT00940000159758 #11	ENSGT00940000154427.B	ENSGT00940000164153 #13	ENSGT00940000163183 #14	ENSGT00390000004681 #15	ENSGT00950000183044.a.b #16	ENSGT00940000154420.C.i #17	ENSGT00950000183014.f.b.a.a.t #18	ENSGT00940000153456.a #19	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747 #23	ENSGT00940000153837.a.a #24	ENSGT00940000162943 #25	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b #26	ENSGT00940000153378.a.a #27	ENSGT00940000154560.b #28	ENSGT00940000154560.a.b #29	ENSGT00940000154560.a.a.a.a.a.a.a.a #31	ENSGT00940000154560.a.a.a.a.a.b #32	ENSGT00940000154560.a.a.a.b.a ##28	ENSGT00940000154560.a.a.a.a.a.a.a.b ##28	ENSGT00940000154560.a.a.a.b.b ##28	ENSGT00940000153378.b.b #34	ENSGT00730000111801 #35	ENSGT00940000161506.g
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000155594 #7	ENSGT00940000154025.a #8	ENSGT00390000010763 #9	ENSGT00940000159342 #10	ENSGT00940000159758 #11	ENSGT00940000154427.B	ENSGT00940000164153 #13	ENSGT00940000163183 #14	ENSGT00390000004681 #15	ENSGT00950000183044.a.b #16	ENSGT00940000154420.C.i #17	ENSGT00950000183014.f.b.a.a.t #18	ENSGT00940000153456.a #19	ENSGT00940000162472 #20	ENSGT00950000183140.a.a.m.a.b #21	ENSGT00940000161068 #22	ENSGT00940000162747 #23	ENSGT00940000153837.a.a #24	ENSGT00940000162943 #25	ENSGT01100000263491.a.b.a.a.a.a.a.b.c.b #26	ENSGT00940000153378.a.a #27	ENSGT00940000154560.b #28	ENSGT00940000154560.a.b #29	ENSGT00940000154560.a.a.a.a.a.a.a.a #31	ENSGT00940000154560.a.a.a.a.a.b #32	ENSGT00940000154560.a.a.a.b.a ##28	ENSGT00940000154560.a.a.a.a.a.a.a.b ##28	ENSGT00940000154560.a.a.a.b.b ##28	ENSGT00940000153378.b.b #34	ENSGT00730000111801 #35
spretus	MODERN SPECIES	6	Puf60 (MGP_SPRETEiJ_G0020812) #7	Scrib (MGP_SPRETEiJ_G0020811) #8	MGP_SPRETEiJ_G0020810 #9	Fam83h (MGP_SPRETEiJ_G0020809) #10	Mapk15 (MGP_SPRETEiJ_G0020808) #11	Ccdc166 (MGP_SPRETEiJ_G0020807) #12	Zfp707 (MGP_SPRETEiJ_G0020806) #13	Zfp623 (MGP_SPRETEiJ_G0020805) #14	MGP_SPRETEiJ_G0020804 #15	Pycrl (MGP_SPRETEiJ_G0020803) #16	Tigd5 (MGP_SPRETEiJ_G0020802) #17	Eef1d (MGP_SPRETEiJ_G0020801) #18	Naprt (MGP_SPRETEiJ_G0020800) #19	Mroh6 (MGP_SPRETEiJ_G0020799) #20	Gsdmd (MGP_SPRETEiJ_G0020798) #21	Zc3h3 (MGP_SPRETEiJ_G0020797) #22	Mafa (MGP_SPRETEiJ_G0020796) #23	Rhpn1 (MGP_SPRETEiJ_G0020795) #24	Top1mt (MGP_SPRETEiJ_G0020794) #25	Zfp41 (MGP_SPRETEiJ_G0020793) #26	Gpihbp1 (MGP_SPRETEiJ_G0020792) #27	Ly6h (MGP_SPRETEiJ_G0020791) #28	Ly6l (MGP_SPRETEiJ_G0020790) #29	MGP_SPRETEiJ_G0020789 #30	Ly6g2 (MGP_SPRETEiJ_G0020788) #31	MGP_SPRETEiJ_G0020787 #32	MGP_SPRETEiJ_G0020785 #33	Ly6e (MGP_SPRETEiJ_G0020784) #34	Ly6m (MGP_SPRETEiJ_G0020783) #35	Gml (MGP_SPRETEiJ_G0020782) #36	Gml2 (MGP_SPRETEiJ_G0020781) #37
Steppe mouse	MODERN SPECIES	2988	Nrbp2 (ENSMSIG00000022514)	Puf60 (ENSMSIG00000022454) #7	ENSMSIG00000021768 #8	Fam83h (ENSMSIG00000021720) #10	Mapk15 (ENSMSIG00000021708) #11	ENSMSIG00000021702	Zfp707 (ENSMSIG00000021670) #13	Zfp623 (ENSMSIG00000021664) #14	ENSMSIG00000021506 #15	Pycrl (ENSMSIG00000021499) #16	Tigd5 (ENSMSIG00000021495) #17	Eef1d (ENSMSIG00000021333) #18	Naprt (ENSMSIG00000021307) #19	Mroh6 (ENSMSIG00000021287) #20	Gsdmd (ENSMSIG00000021268) #21	Zc3h3 (ENSMSIG00000021237) #22	Mafa (ENSMSIG00000021226) #23	Rhpn1 (ENSMSIG00000021180) #24	Top1mt (ENSMSIG00000021154) #25	ENSMSIG00000021147	Zfp41 (ENSMSIG00000021141) #26	Gpihbp1 (ENSMSIG00000021118) #27	Ly6h (ENSMSIG00000021100) #28	Ly6l (ENSMSIG00000021075) #29
Mouse	MODERN SPECIES	6	Puf60 (ENSMUSG00000002524) #7	Scrib (ENSMUSG00000022568) #8	Iqank1 (ENSMUSG00000102018) #9	Fam83h (ENSMUSG00000046761) #10	Mapk15 (ENSMUSG00000063704) #11	Ccdc166 (ENSMUSG00000098176) #12	Zfp707 (ENSMUSG00000034429) #13	Zfp623 (ENSMUSG00000050846) #14	Gfus (ENSMUSG00000022570) #15	Pycrl (ENSMUSG00000022571) #16	Tigd5 (ENSMUSG00000103906) #17	Eef1d (ENSMUSG00000055762) #18	Naprt (ENSMUSG00000022574) #19	Mroh6 (ENSMUSG00000098678) #20	Gsdmd (ENSMUSG00000022575) #21	Zc3h3 (ENSMUSG00000075600) #22	Mafa (ENSMUSG00000047591) #23	Rhpn1 (ENSMUSG00000022580) #24	Top1mt (ENSMUSG00000000934) #25	Zfp41 (ENSMUSG00000047003) #26	Gpihbp1 (ENSMUSG00000022579) #27	Ly6h (ENSMUSG00000022577) #28	Ly6l (ENSMUSG00000093626) #29	Ly6f (ENSMUSG00000022583) ##28	Ly6g2 (ENSMUSG00000047728) #31	Ly6g (ENSMUSG00000022582) #32	Ly6c2 (ENSMUSG00000022584) ##28	Ly6c1 (ENSMUSG00000079018) ##28	Ly6a (ENSMUSG00000075602) ##28	Ly6i (ENSMUSG00000022586) ##28	Ly6e (ENSMUSG00000022587) #34