Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT00960000187885	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35
Glires	ANCESTRAL SPECIES	10	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT00960000187885	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35
Rodentia	ANCESTRAL SPECIES	10	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00390000002414	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837.`b #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00390000005569.x.a.b.b.a.a ##35	ENSGT00530000063624.B
Hystricomorpha_a	ANCESTRAL SPECIES	51	ENSGT00390000002414	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837.`b #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00990000205127 #36	ENSGT00940000157843 #37	ENSGT00950000183118.A.c.b
Hystricomorpha_b	ANCESTRAL SPECIES	74	ENSGT00390000002414	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837.`b #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00990000205127 #36	ENSGT00940000157843 #37	ENSGT00950000183118.A.c.b
Long-tailed chinchilla	MODERN SPECIES	182	DGAT2L6 (ENSCLAG00000010060) #7	AWAT1 (ENSCLAG00000010172) #8	P2RY4 (ENSCLAG00000010260) #9	ARR3 (ENSCLAG00000009975) #10	PDZD11 (ENSCLAG00000010168) #11	KIF4A (ENSCLAG00000010302) #12	GDPD2 (ENSCLAG00000010906) #13	DLG3 (ENSCLAG00000015561) #14	ENSCLAG00000009581 #15	SLC7A3 (ENSCLAG00000010508) #16	SNX12 (ENSCLAG00000004505) #17	FOXO4 (ENSCLAG00000005543) #18	CXorf65 (ENSCLAG00000005706) #19	IL2RG (ENSCLAG00000003047) #20	MED12 (ENSCLAG00000003799) #21	NLGN3 (ENSCLAG00000006482) #22	GJB1 (ENSCLAG00000004895) #23	ZMYM3 (ENSCLAG00000003585) #24	NONO (ENSCLAG00000003642) #25	ITGB1BP2 (ENSCLAG00000003431) #26	ENSCLAG00000004940 #27	OGT (ENSCLAG00000006474) #28	ENSCLAG00000009475 #29	CXCR3 (ENSCLAG00000010111) #30	NHSL2 (ENSCLAG00000011242) #31	RTL5 (ENSCLAG00000014510) #32	PIN4 (ENSCLAG00000014880) #33	ENSCLAG00000015218 #34	ENSCLAG00000015266 #35	ENSCLAG00000015363 #36	HDAC8 (ENSCLAG00000015755) #37
Degu	MODERN SPECIES	321										SLC7A3 (ENSODEG00000003945) #16	ENSODEG00000003876	SNX12 (ENSODEG00000003826) #17	FOXO4 (ENSODEG00000003760) #18	IL2RG (ENSODEG00000003714) #20	MED12 (ENSODEG00000003271) #21	NLGN3 (ENSODEG00000003089) #22	GJB1 (ENSODEG00000003069) #23	ZMYM3 (ENSODEG00000003059) #24	ENSODEG00000018894	ENSODEG00000002994 ##25	ITGB1BP2 (ENSODEG00000002957) #26	ENSODEG00000002771 #27	OGT (ENSODEG00000002656) #28	CXCR3 (ENSODEG00000002401) #30	RTL5 (ENSODEG00000002380) #32	NHSL2 (ENSODEG00000002360) #31	ENSODEG00000002336 #33	ERCC6L (ENSODEG00000002328) #34	RPS4X (ENSODEG00000002268) ##35	ENSODEG00000002252 #36	ENSODEG00000002215
Guinea pig	MODERN SPECIES	26	AWAT2 (ENSCPOG00000000245) ##8	ENSCPOG00000010797	DGAT2L6 (ENSCPOG00000003992) #7	AWAT1 (ENSCPOG00000003996) #8	ENSCPOG00000036057 ##10	PDZD11 (ENSCPOG00000000210) #11	KIF4A (ENSCPOG00000000211) #12	GDPD2 (ENSCPOG00000035846) #13	DLG3 (ENSCPOG00000000746) #14	SLC7A3 (ENSCPOG00000005002) #16	SNX12 (ENSCPOG00000011841) #17	FOXO4 (ENSCPOG00000004771) #18	CXorf65 (ENSCPOG00000004768) #19	IL2RG (ENSCPOG00000031320) #20	MED12 (ENSCPOG00000000903) #21	NLGN3 (ENSCPOG00000006193) #22	ZMYM3 (ENSCPOG00000010256) #24	ENSCPOG00000010263 #25	ITGB1BP2 (ENSCPOG00000038156) #26	ENSCPOG00000039595	ENSCPOG00000035003 #27	OGT (ENSCPOG00000014682) #28	CXCR3 (ENSCPOG00000008446) #30	RTL5 (ENSCPOG00000021990) #32	NHSL2 (ENSCPOG00000005172) #31	PIN4 (ENSCPOG00000031758) #33	ERCC6L (ENSCPOG00000011407) #34	ENSCPOG00000006337 #35	ENSCPOG00000003816 #36	HDAC8 (ENSCPOG00000005671) #37	PHKA1 (ENSCPOG00000005675)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000039057	NEXMIF (ENSHGLG00000012593)	ABCB7 (ENSHGLG00000011499)	UPRT (ENSHGLG00000050110)	ENSHGLG00000011317	ENSHGLG00000006554	ZDHHC15 (ENSHGLG00000005176)	ENSHGLG00000004443	ENSHGLG00000035742	ENSHGLG00000032329	ENSHGLG00000045854 #17	FOXO4 (ENSHGLG00000013305) #18	ENSHGLG00000004894 #19	ENSHGLG00000010744 #20	MED12 (ENSHGLG00000005421) #21	NLGN3 (ENSHGLG00000009982) #22	GJB1 (ENSHGLG00000004743) #23	ZMYM3 (ENSHGLG00000014526) #24	NONO (ENSHGLG00000005550) #25	ITGB1BP2 (ENSHGLG00000015433) #26	ENSHGLG00000050039	ENSHGLG00000050796	ENSHGLG00000014818 #27	ENSHGLG00000031947	ENSHGLG00000049149	ENSHGLG00000040608 #28	ENSHGLG00000007209 #28	ENSHGLG00000042327	ENSHGLG00000050614	ENSHGLG00000008499 #30	ENSHGLG00000034062
Sciuridae	ANCESTRAL SPECIES	35	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.a.a	ENSGT00390000015252.b	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35
Marmotini	ANCESTRAL SPECIES	66	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a	ENSGT00390000018613.b.t.a	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.a.a	ENSGT00390000015252.a.b	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33
Marmotini_b	ANCESTRAL SPECIES	98	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a	ENSGT00390000018613.b.t.a	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30
Squirrel	MODERN SPECIES	362	DGAT2L6 (ENSSTOG00000024800) #7	AWAT1 (ENSSTOG00000011451) #8	P2RY4 (ENSSTOG00000015697) #9	Arr3 (ENSSTOG00000011462) #10	PDZD11 (ENSSTOG00000027107) #11	KIF4A (ENSSTOG00000009604) #12	GDPD2 (ENSSTOG00000004472) #13	DLG3 (ENSSTOG00000009640) #14	TEX11 (ENSSTOG00000009656)	SLC7A3 (ENSSTOG00000014255) #16	SNX12 (ENSSTOG00000028586) #17	FOXO4 (ENSSTOG00000014587) #18	CXorf65 (ENSSTOG00000031360) #19	IL2RG (ENSSTOG00000031446) #20	MED12 (ENSSTOG00000015847) #21	NLGN3 (ENSSTOG00000015853) #22	GJB1 (ENSSTOG00000023581) #23	ZMYM3 (ENSSTOG00000015858) #24	NONO (ENSSTOG00000015869) #25	ITGB1BP2 (ENSSTOG00000015874) #26	ENSSTOG00000015879 #27	ENSSTOG00000024910	ENSSTOG00000032111	OGT (ENSSTOG00000012021) #28	CXCR3 (ENSSTOG00000008726) #30
Arctic ground squirrel	MODERN SPECIES	546									ENSUPAG00010005983	SLC7A3 (ENSUPAG00010005959) #16	SNX12 (ENSUPAG00010005944) #17	FOXO4 (ENSUPAG00010005942) #18	CXorf65 (ENSUPAG00010005934) #19	IL2RG (ENSUPAG00010005932) #20	MED12 (ENSUPAG00010005824) #21	NLGN3 (ENSUPAG00010005804) #22	GJB1 (ENSUPAG00010005797) #23	ZMYM3 (ENSUPAG00010005753) #24	NONO (ENSUPAG00010005675) #25	ITGB1BP2 (ENSUPAG00010005653) #26	ENSUPAG00010005634	ENSUPAG00010005288 #27	ENSUPAG00010005279	OGT (ENSUPAG00010005205) #28	CXCR3 (ENSUPAG00010005200) #30
Alpin marmot	MODERN SPECIES	74	ENSMMMG00000022106	DGAT2L6 (ENSMMMG00000022102) #7	AWAT1 (ENSMMMG00000022093) #8	P2RY4 (ENSMMMG00000022091) #9	ARR3 (ENSMMMG00000022081) #10	PDZD11 (ENSMMMG00000022078) #11	ENSMMMG00000022071	KIF4A (ENSMMMG00000022057) #12	GDPD2 (ENSMMMG00000022047) #13	ENSMMMG00000022037 #14	SLC7A3 (ENSMMMG00000022021) #16	FOXO4 (ENSMMMG00000022014) #18	CXorf65 (ENSMMMG00000022011) #19	IL2RG (ENSMMMG00000022006) #20	MED12 (ENSMMMG00000021946) #21	NLGN3 (ENSMMMG00000021942) #22	GJB1 (ENSMMMG00000021941) #23	ZMYM3 (ENSMMMG00000021815) #24	ITGB1BP2 (ENSMMMG00000021791) #26	ENSMMMG00000021790	ENSMMMG00000021716 #27	ENSMMMG00000021704	ENSMMMG00000021699	ENSMMMG00000021687 #28	CXCR3 (ENSMMMG00000021685) #30	ENSMMMG00000021680	ENSMMMG00000021674	ENSMMMG00000021670	RTL5 (ENSMMMG00000021665) #32	NHSL2 (ENSMMMG00000021658) #31	PIN4 (ENSMMMG00000021657) #33
Eurasian red squirrel	MODERN SPECIES	156	DGAT2L6 (ENSSVLG00005018323) #7	AWAT1 (ENSSVLG00005018253) #8	P2RY4 (ENSSVLG00005018235) #9	ARR3 (ENSSVLG00005017806) #10	ENSSVLG00005017695 #11	KIF4A (ENSSVLG00005017359) #12	GDPD2 (ENSSVLG00005017032) #13	DLG3 (ENSSVLG00005016553) #14	TEX11 (ENSSVLG00005015907)	SLC7A3 (ENSSVLG00005015759) #16	SNX12 (ENSSVLG00005015734) #17	FOXO4 (ENSSVLG00005015644) #18	CXorf65 (ENSSVLG00005015576) #19	IL2RG (ENSSVLG00005015413) #20	MED12 (ENSSVLG00005014181) #21	NLGN3 (ENSSVLG00005013911) #22	GJB1 (ENSSVLG00005013631) #23	ZMYM3 (ENSSVLG00005019858) #24	NONO (ENSSVLG00005019645) #25	ITGB1BP2 (ENSSVLG00005019473) #26	ENSSVLG00005019328	ENSSVLG00005018492 #27	ENSSVLG00005018371	OGT (ENSSVLG00005018140) #28	CXCR3 (ENSSVLG00005018095) #30	ENSSVLG00005018019	SERP1 (ENSSVLG00005017996)	ENSSVLG00005017896	ENSSVLG00005017662	ENSSVLG00005017338	ENSSVLG00005017271
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B	ENSGT00940000157843 #37
Kangaroo rat	MODERN SPECIES	461	Awat2 (ENSDORG00000006533) ##8	Igbp1 (ENSDORG00000014098)	Dgat2l6 (ENSDORG00000001879) #7	Awat1 (ENSDORG00000008150) #8	P2ry4 (ENSDORG00000027667) #9	Pdzd11 (ENSDORG00000026694) #11	Kif4 (ENSDORG00000007037) #12	Gdpd2 (ENSDORG00000007039) #13	Dlg3 (ENSDORG00000014090) #14	Slc7a3 (ENSDORG00000015674) #16	Snx12 (ENSDORG00000025420) #17	Foxo4 (ENSDORG00000002179) #18	Gm614 (ENSDORG00000002180) #19	ENSDORG00000028448 #20	Med12 (ENSDORG00000009816) #21	Nlgn3 (ENSDORG00000007300) #22	Gjb1 (ENSDORG00000029488) #23	Zmym3 (ENSDORG00000012711) #24	Nono (ENSDORG00000009294) ##25	Itgb1bp2 (ENSDORG00000009296) #26	Taf1 (ENSDORG00000014574) #27	Ogt (ENSDORG00000001452) #28	Cxcr3 (ENSDORG00000008991) #30
Myomorpha	ANCESTRAL SPECIES	6	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B	ENSGT00940000157843 #37
Muroidea	ANCESTRAL SPECIES	50	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000165859	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B	ENSGT00940000157843 #37
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.b	ENSGT00390000015252.c.a.a	ENSGT00390000015252.d	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35
Cricetidae	ANCESTRAL SPECIES	8	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.b	ENSGT00390000015252.c.a.a	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Cricetinae	ANCESTRAL SPECIES	17	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.b.b ##35	ENSGT00530000063624.B	ENSGT00940000157843 #37	ENSGT00950000183118.A.c.b
Chinese hamster chok1gshd	MODERN SPECIES	33	Dgat2l6 (ENSCGRG00001015043) #7	Awat1 (ENSCGRG00001000725) #8	P2ry4 (ENSCGRG00001011494) #9	Arr3 (ENSCGRG00001023414) #10	Pdzd11 (ENSCGRG00001013413) #11	Kif4 (ENSCGRG00001017530) #12	Gdpd2 (ENSCGRG00001015175) #13	Dlg3 (ENSCGRG00001022737) #14	Tex11 (ENSCGRG00001000719)	Slc7a3 (ENSCGRG00001017791) #16	Snx12 (ENSCGRG00001015601) #17	Foxo4 (ENSCGRG00001022344) #18	Gm614 (ENSCGRG00001017836) #19	Il2rg (ENSCGRG00001013221) #20	Med12 (ENSCGRG00001018258) #21	Nlgn3 (ENSCGRG00001000542) #22	Gjb1 (ENSCGRG00001011378) #23	Zmym3 (ENSCGRG00001001086) #24	Nono (ENSCGRG00001000065) #25	Itgb1bp2 (ENSCGRG00001021490) #26	Taf1 (ENSCGRG00001016967) #27	Tmem98 (ENSCGRG00001000052)	Spaca3 (ENSCGRG00001020949)	Asic2 (ENSCGRG00001013978)	Ccl2 (ENSCGRG00001010610)	Ccl7 (ENSCGRG00001016678)	Ccl11 (ENSCGRG00001018174)	Ccl12 (ENSCGRG00001015572)	ENSCGRG00001022162	ENSCGRG00001006677	Tmem132e (ENSCGRG00001013155)
Golden Hamster	MODERN SPECIES	727	Dgat2l6 (ENSMAUG00000007846) #7	Awat1 (ENSMAUG00000018520) #8	P2ry4 (ENSMAUG00000009801) #9	ENSMAUG00000014193 ##10	Pdzd11 (ENSMAUG00000006499) #11	Kif4 (ENSMAUG00000009423) #12	Gdpd2 (ENSMAUG00000019667) #13	Dlg3 (ENSMAUG00000000856) #14	Tex11 (ENSMAUG00000005559)	Slc7a3 (ENSMAUG00000002237) #16	Snx12 (ENSMAUG00000020702) #17	Foxo4 (ENSMAUG00000019650) #18	Gm614 (ENSMAUG00000021631) #19	Il2rg (ENSMAUG00000011396) #20	Med12 (ENSMAUG00000020706) #21	Nlgn3 (ENSMAUG00000004367) #22	Gjb1 (ENSMAUG00000011973) #23	Zmym3 (ENSMAUG00000015148) #24	Nono (ENSMAUG00000016243) #25	Itgb1bp2 (ENSMAUG00000007311) #26	Taf1 (ENSMAUG00000018664) #27	ENSMAUG00000010446 #28	ENSMAUG00000015275 #28	Cxcr3 (ENSMAUG00000006658) #30	ENSMAUG00000007111	Nhsl2 (ENSMAUG00000013469) #31	Rtl5 (ENSMAUG00000009321) #32	Pin4 (ENSMAUG00000015251) #33	Rps4x (ENSMAUG00000013223) #35	Cited1 (ENSMAUG00000020556)	Hdac8 (ENSMAUG00000006310) #37
Cricetidae_B	ANCESTRAL SPECIES	54	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.b	ENSGT00390000015252.c.a.a	ENSGT00940000163191 #32	ENSGT00950000182963.b.b #31	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Prairie vole	MODERN SPECIES	360	Igbp1 (ENSMOCG00000020509)	Dgat2l6 (ENSMOCG00000012031) #7	Awat1 (ENSMOCG00000001888) #8	P2ry4 (ENSMOCG00000000731) #9	Pdzd11 (ENSMOCG00000014558) #11	ENSMOCG00000009586	ENSMOCG00000005746	Gdpd2 (ENSMOCG00000021168) #13	Dlg3 (ENSMOCG00000015839) #14	Tex11 (ENSMOCG00000017235)	Snx12 (ENSMOCG00000001926) #17	Foxo4 (ENSMOCG00000018069) #18	Gm614 (ENSMOCG00000016704) #19	Il2rg (ENSMOCG00000011326) #20	Med12 (ENSMOCG00000013807) #21	Nlgn3 (ENSMOCG00000015847) #22	Gjb1 (ENSMOCG00000009230) #23	Zmym3 (ENSMOCG00000007682) #24	ENSMOCG00000005532 ##25	Itgb1bp2 (ENSMOCG00000021266) #26	Taf1 (ENSMOCG00000001297) #27	Ogt (ENSMOCG00000013563) #28	Cxcr3 (ENSMOCG00000007041) #30	Rtl5 (ENSMOCG00000000142) #32	Nhsl2 (ENSMOCG00000002880) #31	ENSMOCG00000000929 #33	Ercc6l (ENSMOCG00000021344) #34	ENSMOCG00000014451 #35	Cited1 (ENSMOCG00000013938)	Hdac8 (ENSMOCG00000019902) #37	Phka1 (ENSMOCG00000013482)
Northern American deer mouse	MODERN SPECIES	475	P2ry4 (ENSPEMG00000030887) #9	Arr3 (ENSPEMG00000007744) #10	Pdzd11 (ENSPEMG00000014531) #11	Kif4 (ENSPEMG00000010692) #12	Gdpd2 (ENSPEMG00000023492) #13	Dlg3 (ENSPEMG00000007724) #14	ENSPEMG00000013301	Tex11 (ENSPEMG00000024188)	Slc7a3 (ENSPEMG00000011675) #16	Snx12 (ENSPEMG00000013660) #17	ENSPEMG00000027735	Foxo4 (ENSPEMG00000013500) #18	Gm614 (ENSPEMG00000000266) #19	Il2rg (ENSPEMG00000002794) #20	Med12 (ENSPEMG00000023189) #21	Nlgn3 (ENSPEMG00000023260) #22	Gjb1 (ENSPEMG00000023611) #23	Zmym3 (ENSPEMG00000022158) #24	Nono (ENSPEMG00000011150) #25	Itgb1bp2 (ENSPEMG00000004183) #26	ENSPEMG00000029064	Taf1 (ENSPEMG00000011524) #27	Ogt (ENSPEMG00000012399) #28	Cxcr3 (ENSPEMG00000018113) #30	Gm4779 (ENSPEMG00000015753)	8030474K03Rik (ENSPEMG00000028164)	Rtl5 (ENSPEMG00000028195) #32	Nhsl2 (ENSPEMG00000006950) #31	Pin4 (ENSPEMG00000009326) #33	Ercc6l (ENSPEMG00000007920) #34	ENSPEMG00000016482 #35
Murinae	ANCESTRAL SPECIES	14	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979.c.b #20	ENSGT00510000048979.c.a #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.a	ENSGT00390000015252.d	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Mus	ANCESTRAL SPECIES	9	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979.c.b #20	ENSGT00510000048979.c.a #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.a	ENSGT00390000015252.d	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Mus_A	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979.c.b #20	ENSGT00510000048979.c.a #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.a	ENSGT00390000015252.d	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35	ENSGT00530000063624.B
Mus_B	ANCESTRAL SPECIES	14	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979.c.b #20	ENSGT00510000048979.c.a #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.b	ENSGT00390000015252.c.a.a	ENSGT00390000015252.d	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.a #35
Mus_C	ANCESTRAL SPECIES	22	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979.c.b #20	ENSGT00510000048979.c.a #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.b #25	ENSGT00940000159429 #26	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.c.a.a	ENSGT00390000015252.d	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34	ENSGT00390000005569.x.a.b.b.b ##35	ENSGT00530000063624.B
Steppe mouse	MODERN SPECIES	1604																Nlgn3 (ENSMSIG00000030060) #22
spretus	MODERN SPECIES	19	Awat1 (MGP_SPRETEiJ_G0034434) #8	P2ry4 (MGP_SPRETEiJ_G0034435) #9	Arr3 (MGP_SPRETEiJ_G0034436) #10	Pdzd11 (MGP_SPRETEiJ_G0034437) #11	Kif4 (MGP_SPRETEiJ_G0034438) #12	Gdpd2 (MGP_SPRETEiJ_G0034439) #13	Dlg3 (MGP_SPRETEiJ_G0034440) #14	Tex11 (MGP_SPRETEiJ_G0034441)	Slc7a3 (MGP_SPRETEiJ_G0034442) #16	Snx12 (MGP_SPRETEiJ_G0034443) #17	Foxo4 (MGP_SPRETEiJ_G0034444) #18	Gm614 (MGP_SPRETEiJ_G0034445) #19	MGP_SPRETEiJ_G0034446 #20	Il2rg (MGP_SPRETEiJ_G0034447) #20	Med12 (MGP_SPRETEiJ_G0034448) #21	Nlgn3 (MGP_SPRETEiJ_G0034449) #22	Gjb1 (MGP_SPRETEiJ_G0034450) #23	Zmym3 (MGP_SPRETEiJ_G0034451) #24	Itgb1bp2 (MGP_SPRETEiJ_G0034453) #26	Taf1 (MGP_SPRETEiJ_G0034454) #27	Ogt (MGP_SPRETEiJ_G0034455) #28	Cxcr3 (MGP_SPRETEiJ_G0034456) #30	8030474K03Rik (MGP_SPRETEiJ_G0034457)	Nhsl2 (MGP_SPRETEiJ_G0034458) #31	Rtl5 (MGP_SPRETEiJ_G0034459) #32	Pin4 (MGP_SPRETEiJ_G0034460) #33	Ercc6l (MGP_SPRETEiJ_G0034461) #34	MGP_SPRETEiJ_G0034462 ##35	Cited1 (MGP_SPRETEiJ_G0034463)	Hdac8 (MGP_SPRETEiJ_G0034464) #37	Phka1 (MGP_SPRETEiJ_G0034465)
Mouse	MODERN SPECIES	37	Dgat2l6 (ENSMUSG00000067597) #7	Awat1 (ENSMUSG00000015665) #8	P2ry4 (ENSMUSG00000044359) #9	Arr3 (ENSMUSG00000060890) #10	Pdzd11 (ENSMUSG00000015668) #11	Kif4 (ENSMUSG00000034311) #12	Gdpd2 (ENSMUSG00000019359) #13	Dlg3 (ENSMUSG00000000881) #14	Tex11 (ENSMUSG00000009670)	Slc7a3 (ENSMUSG00000031297) #16	Snx12 (ENSMUSG00000046032) #17	Foxo4 (ENSMUSG00000042903) #18	Gm614 (ENSMUSG00000090141) #19	Il2rg (ENSMUSG00000031304) #20	Med12 (ENSMUSG00000079487) #21	Nlgn3 (ENSMUSG00000031302) #22	Gjb1 (ENSMUSG00000047797) #23	Zmym3 (ENSMUSG00000031310) #24	Nono (ENSMUSG00000031311) #25	Itgb1bp2 (ENSMUSG00000031312) #26	Taf1 (ENSMUSG00000031314) #27	Ogt (ENSMUSG00000034160) #28	Cxcr3 (ENSMUSG00000050232) #30	Gm4779 (ENSMUSG00000045010)	8030474K03Rik (ENSMUSG00000046774)	Gm3858 (ENSMUSG00000118638)	Nhsl2 (ENSMUSG00000079481) #31	Rtl5 (ENSMUSG00000049191) #32	Pin4 (ENSMUSG00000079480) #33	Ercc6l (ENSMUSG00000051220) #34	Rps4x (ENSMUSG00000031320) #35
Ryukyu mouse	MODERN SPECIES	19	Awat1 (MGP_CAROLIEiJ_G0033270) #8	P2ry4 (MGP_CAROLIEiJ_G0033271) #9	Arr3 (MGP_CAROLIEiJ_G0033272) #10	Pdzd11 (MGP_CAROLIEiJ_G0033273) #11	Kif4 (MGP_CAROLIEiJ_G0033274) #12	Gdpd2 (MGP_CAROLIEiJ_G0033275) #13	Dlg3 (MGP_CAROLIEiJ_G0033276) #14	Tex11 (MGP_CAROLIEiJ_G0033277)	Slc7a3 (MGP_CAROLIEiJ_G0033278) #16	Snx12 (MGP_CAROLIEiJ_G0033279) #17	Foxo4 (MGP_CAROLIEiJ_G0033280) #18	Gm614 (MGP_CAROLIEiJ_G0033281) #19	MGP_CAROLIEiJ_G0033282 #20	Il2rg (MGP_CAROLIEiJ_G0033283) #20	Med12 (MGP_CAROLIEiJ_G0033284) #21	Nlgn3 (MGP_CAROLIEiJ_G0033285) #22	Gjb1 (MGP_CAROLIEiJ_G0033286) #23	Zmym3 (MGP_CAROLIEiJ_G0033287) #24	MGP_CAROLIEiJ_G0033288 #25	Itgb1bp2 (MGP_CAROLIEiJ_G0033289) #26	Taf1 (MGP_CAROLIEiJ_G0033290) #27	Ogt (MGP_CAROLIEiJ_G0033291) #28	Cxcr3 (MGP_CAROLIEiJ_G0033292) #30	MGP_CAROLIEiJ_G0033293	Nhsl2 (MGP_CAROLIEiJ_G0033294) #31	Rtl5 (MGP_CAROLIEiJ_G0033295) #32	MGP_CAROLIEiJ_G0033296 #33	Ercc6l (MGP_CAROLIEiJ_G0033297) #34	Rps4x (MGP_CAROLIEiJ_G0033298) #35	Cited1 (MGP_CAROLIEiJ_G0033299)	Hdac8 (MGP_CAROLIEiJ_G0033300) #37
Shrew mouse	MODERN SPECIES	23	Awat1 (MGP_PahariEiJ_G0031808) #8	P2ry4 (MGP_PahariEiJ_G0031809) #9	Arr3 (MGP_PahariEiJ_G0031810) #10	Pdzd11 (MGP_PahariEiJ_G0031811) #11	Kif4 (MGP_PahariEiJ_G0031812) #12	Gdpd2 (MGP_PahariEiJ_G0031813) #13	Dlg3 (MGP_PahariEiJ_G0031814) #14	Tex11 (MGP_PahariEiJ_G0031815)	Slc7a3 (MGP_PahariEiJ_G0031816) #16	Snx12 (MGP_PahariEiJ_G0031817) #17	Foxo4 (MGP_PahariEiJ_G0031818) #18	Gm614 (MGP_PahariEiJ_G0031819) #19	MGP_PahariEiJ_G0031820 #20	Il2rg (MGP_PahariEiJ_G0031821) #20	Med12 (MGP_PahariEiJ_G0031822) #21	Nlgn3 (MGP_PahariEiJ_G0031823) #22	Gjb1 (MGP_PahariEiJ_G0031824) #23	Zmym3 (MGP_PahariEiJ_G0031825) #24	Nono (MGP_PahariEiJ_G0031826) #25	Itgb1bp2 (MGP_PahariEiJ_G0031827) #26	MGP_PahariEiJ_G0031828 #27	Ogt (MGP_PahariEiJ_G0031829) #28	Cxcr3 (MGP_PahariEiJ_G0031830) #30	MGP_PahariEiJ_G0031831	Nhsl2 (MGP_PahariEiJ_G0031832) #31	Rtl5 (MGP_PahariEiJ_G0031833) #32	Pin4 (MGP_PahariEiJ_G0031834) #33	Ercc6l (MGP_PahariEiJ_G0031835) #34	Rps4x (MGP_PahariEiJ_G0031836) #35	Cited1 (MGP_PahariEiJ_G0031837)	Hdac8 (MGP_PahariEiJ_G0031838) #37
Rat	MODERN SPECIES	46	Igbp1 (ENSRNOG00000026267)	Dgat2l6 (ENSRNOG00000038046) #7	Awat1 (ENSRNOG00000026231) #8	P2ry4 (ENSRNOG00000070777) #9	Arr3 (ENSRNOG00000002904) #10	Pdzd11 (ENSRNOG00000064140) #11	Kif4a (ENSRNOG00000038035) #12	Gdpd2 (ENSRNOG00000002800) #13	Dlg3 (ENSRNOG00000002767) #14	Tex11 (ENSRNOG00000025672)	Slc7a3 (ENSRNOG00000004133) #16	Snx12 (ENSRNOG00000004036) #17	Foxo4 (ENSRNOG00000033316) #18	CXHXorf65 (ENSRNOG00000003954) #20	Med12 (ENSRNOG00000003848) #21	Nlgn3 (ENSRNOG00000003812) #22	Gjb1 (ENSRNOG00000063213) #23	Zmym3 (ENSRNOG00000003707) #24	Nono (ENSRNOG00000003689) #25	Itgb1bp2 (ENSRNOG00000003596) #26	Taf1 (ENSRNOG00000002565) #27	Ogt (ENSRNOG00000003359) #28	LOC102548506 (ENSRNOG00000066689)	Cxcr3 (ENSRNOG00000003305) #30	LOC102553785 (ENSRNOG00000025200)	Cxhxorf49 (ENSRNOG00000025211)	LOC102555994 (ENSRNOG00000060462)	Nhsl2 (ENSRNOG00000037951) #31	Rtl5 (ENSRNOG00000045779) #32	Pin4 (ENSRNOG00000050051) #33	Ercc6l (ENSRNOG00000003208) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1742								ENSNGAG00000018164	Slc7a3 (ENSNGAG00000016276) #16	Snx12 (ENSNGAG00000011415) #17	ENSNGAG00000010512 #18	ENSNGAG00000015548 #18	Gm614 (ENSNGAG00000019851) #19	Il2rg (ENSNGAG00000014836) #20	Med12 (ENSNGAG00000014627) #21	Nlgn3 (ENSNGAG00000011722) #22	Gjb1 (ENSNGAG00000008737) #23	Zmym3 (ENSNGAG00000016287) #24	Nono (ENSNGAG00000010857) #25	Itgb1bp2 (ENSNGAG00000011479) #26	Taf1 (ENSNGAG00000019411) #27	ENSNGAG00000013716	Ogt (ENSNGAG00000017957) #28	Cxcr3 (ENSNGAG00000012996) #30	Rtl5 (ENSNGAG00000014752) #32	Nhsl2 (ENSNGAG00000006702) #31	ENSNGAG00000000797 #33	Ercc6l (ENSNGAG00000021063) #34	Rps4x (ENSNGAG00000011593) #35	Cited1 (ENSNGAG00000010654)	Hdac8 (ENSNGAG00000000558) #37
Lesser Egyptian jerboa	MODERN SPECIES	80	P2ry4 (ENSJJAG00000019687) #9	ENSJJAG00000023597	Pdzd11 (ENSJJAG00000020264) #11	Kif4 (ENSJJAG00000000294) #12	Gdpd2 (ENSJJAG00000014781) #13	Dlg3 (ENSJJAG00000014971) #14	ENSJJAG00000016532	Tex11 (ENSJJAG00000018454)	Slc7a3 (ENSJJAG00000019367) #16	ENSJJAG00000022270	Snx12 (ENSJJAG00000018084) #17	Foxo4 (ENSJJAG00000013280) #18	Gm614 (ENSJJAG00000019595) #19	Il2rg (ENSJJAG00000013180) #20	Med12 (ENSJJAG00000011766) #21	Nlgn3 (ENSJJAG00000022749) #22	Gjb1 (ENSJJAG00000015275) #23	Zmym3 (ENSJJAG00000017423) #24	ENSJJAG00000017151 #25	Itgb1bp2 (ENSJJAG00000022114) #26	Taf1 (ENSJJAG00000016231) #27	ENSJJAG00000016438 #28	ENSJJAG00000013564 #28	ENSJJAG00000020751	Cxcr3 (ENSJJAG00000024149) #30	ENSJJAG00000008830	ENSJJAG00000023103	Pin4 (ENSJJAG00000022110) #33	Ercc6l (ENSJJAG00000022875) #34	Rps4x (ENSJJAG00000018258) #35	Cited1 (ENSJJAG00000021265)
Lagomorpha	ANCESTRAL SPECIES	40	ENSGT01030000234582.f.a.a.a.a #7	ENSGT01030000234582.f.a.a.b #8	ENSGT01030000234621.C.a.a.a #9	ENSGT00950000182887.C.b.b #10	ENSGT00940000153222.a.b.b.b.b #11	ENSGT00940000158195 #12	ENSGT00940000159625 #13	ENSGT00940000159565 #14	ENSGT00390000006492	ENSGT00940000154651 #16	ENSGT00940000153609.a #17	ENSGT00940000159334 #18	ENSGT00510000049291 #19	ENSGT00510000048979 #20	ENSGT00440000037505.b #21	ENSGT00940000159580 #22	ENSGT00960000187885	ENSGT01030000234513.B.a #23	ENSGT00940000160693 #24	ENSGT00940000154442.sc.a.b ##25	ENSGT00940000159429 #26	ENSGT00940000163331	ENSGT00940000155242 #27	ENSGT00940000155085.b #28	ENSGT01050000244848.B.a.b #30	ENSGT00390000015252.f	ENSGT00390000015252.e.a	ENSGT00950000182963.b.b #31	ENSGT00940000163191 #32	ENSGT00510000047029 #33	ENSGT00940000156837 #34
Rabbit	MODERN SPECIES	1401	AWAT1 (ENSOCUG00000009725) #8	P2RY4 (ENSOCUG00000017070) #9	ARR3 (ENSOCUG00000017073) #10	PDZD11 (ENSOCUG00000017101) #11	KIF4A (ENSOCUG00000017111) #12	GDPD2 (ENSOCUG00000017133) #13	DLG3 (ENSOCUG00000017149) #14	TEX11 (ENSOCUG00000011134)	ENSOCUG00000030602	SLC7A3 (ENSOCUG00000010551) #16	SNX12 (ENSOCUG00000014919) #17	FOXO4 (ENSOCUG00000027545) #18	CXorf65 (ENSOCUG00000013046) #19	ENSOCUG00000025850 #20	MED12 (ENSOCUG00000006797) #21	NLGN3 (ENSOCUG00000006811) #22	ENSOCUG00000032710	GJB1 (ENSOCUG00000004588) #23	ZMYM3 (ENSOCUG00000012396) #24	ENSOCUG00000021848 ##25	ITGB1BP2 (ENSOCUG00000016643) #26	ENSOCUG00000022027	ENSOCUG00000015656 #27	OGT (ENSOCUG00000016965) #28	CXCR3 (ENSOCUG00000015578) #30	ENSOCUG00000030259	ENSOCUG00000028210	ENSOCUG00000003502	ENSOCUG00000036122	ENSOCUG00000029215	ENSOCUG00000029373
Pika	MODERN SPECIES	4312																ENSOPRG00000003687 #22