Amniota	ANCESTRAL SPECIES	6	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00940000159232	ENSGT00940000156190
Mammalia	ANCESTRAL SPECIES	6	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000159232	ENSGT00940000156190	ENSGT00390000004840	ENSGT00960000187202
Theria	ANCESTRAL SPECIES	5	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272	ENSGT00940000158720	ENSGT00940000159232	ENSGT00940000156190
Eutheria	ANCESTRAL SPECIES	10	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000163272	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT01090000260046	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Primates	ANCESTRAL SPECIES	13	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a #18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00910000147537 #37	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000147537 #37	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00910000147537 #37	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00950000182810.A.a.a.lb.d #21	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00910000147537 #37	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00950000182810.A.a.a.lb.d #21	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Olive baboon	MODERN SPECIES	1	CYP20A1 (ENSPANG00000002439) #7	ABI2 (ENSPANG00000023238) #8	RAPH1 (ENSPANG00000018186) #9	CD28 (ENSPANG00000011488) #10	CTLA4 (ENSPANG00000007100) #11	ICOS (ENSPANG00000010251) #12	ENSPANG00000042490 #13	PARD3B (ENSPANG00000017315) #14	NRP2 (ENSPANG00000011487) #15	INO80D (ENSPANG00000005753) #16	NDUFS1 (ENSPANG00000019101) #17	ENSPANG00000011248 #18	CMKLR2 (ENSPANG00000007301) #19	ZDBF2 (ENSPANG00000023236) #20	ENSPANG00000032033 #21	ADAM23 (ENSPANG00000025872) #22	FAM237A (ENSPANG00000032174) #23	DYTN (ENSPANG00000011028) #24	MDH1B (ENSPANG00000022792) #25	ENSPANG00000043039 #26	FASTKD2 (ENSPANG00000012835) #27	CPO (ENSPANG00000005004) #28	KLF7 (ENSPANG00000005240) #29	CREB1 (ENSPANG00000009083) #30	METTL21A (ENSPANG00000024440) #31	ENSPANG00000047863 #32	ENSPANG00000050559 #33	CCNYL1 (ENSPANG00000011206) #34	FZD5 (ENSPANG00000004676) #35	ENSPANG00000050051 #36	ENSPANG00000049745 #37
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00950000182810.A.a.a.lb.d #21	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Drill	MODERN SPECIES	1118											ENSMLEG00000011609 #17	ENSMLEG00000036475 #18	CMKLR2 (ENSMLEG00000027347) #19	ZDBF2 (ENSMLEG00000026949) #20	ENSMLEG00000039767 #21	ADAM23 (ENSMLEG00000028493) #22	FAM237A (ENSMLEG00000037673) #23	DYTN (ENSMLEG00000040225) #24	MDH1B (ENSMLEG00000030914) #25	FASTKD2 (ENSMLEG00000030777) #27	CPO (ENSMLEG00000034929) #28	KLF7 (ENSMLEG00000003421) #29	CREB1 (ENSMLEG00000033904) #30	METTL21A (ENSMLEG00000028195) #31	CCNYL1 (ENSMLEG00000041254) #34	ENSMLEG00000039230 #37	ENSMLEG00000039137	PLEKHM3 (ENSMLEG00000029115)	ENSMLEG00000040026	CRYGD (ENSMLEG00000027151)	CRYGC (ENSMLEG00000044264)
Sooty mangabey	MODERN SPECIES	570	NBEAL1 (ENSCATG00000036478)	CYP20A1 (ENSCATG00000034415) #7	ABI2 (ENSCATG00000038300) #8	RAPH1 (ENSCATG00000044686) #9	ENSCATG00000043923	CD28 (ENSCATG00000043017) #10	CTLA4 (ENSCATG00000036235) #11	ICOS (ENSCATG00000043591) #12	PARD3B (ENSCATG00000022284) #14	NRP2 (ENSCATG00000032051) #15	INO80D (ENSCATG00000044654) #16	NDUFS1 (ENSCATG00000037259) #17	ENSCATG00000037736 #18	ZDBF2 (ENSCATG00000037091) #20	ENSCATG00000037624 #21	ADAM23 (ENSCATG00000043626) #22	FAM237A (ENSCATG00000036777) #23	DYTN (ENSCATG00000035275) #24	MDH1B (ENSCATG00000035467) #25	FASTKD2 (ENSCATG00000038647) #27	CPO (ENSCATG00000043384) #28	KLF7 (ENSCATG00000041615) #29	CREB1 (ENSCATG00000037133) #30	METTL21A (ENSCATG00000041598) #31	CCNYL1 (ENSCATG00000037115) #34	FZD5 (ENSCATG00000004406) #35	ENSCATG00000036323	PLEKHM3 (ENSCATG00000036070)	ENSCATG00000036671	CRYGD (ENSCATG00000037915)	CRYGC (ENSCATG00000036220)
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000156089 #8	ENSGT00940000156552.b #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00950000182810.A.a.a.lb.d #21	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00910000147537 #37	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552.b #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000147537 #37	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Rhesus	MODERN SPECIES	3	ABI2 (ENSMMUG00000000312) #8	RAPH1 (ENSMMUG00000000314) #9	CD28 (ENSMMUG00000057214) #10	CTLA4 (ENSMMUG00000015903) #11	ICOS (ENSMMUG00000002648) #12	ENSMMUG00000052080	PARD3B (ENSMMUG00000014814) #14	ENSMMUG00000055410	NRP2 (ENSMMUG00000020052) #15	INO80D (ENSMMUG00000001053) #16	ENSMMUG00000054550	NDUFS1 (ENSMMUG00000016788) #17	EEF1B2 (ENSMMUG00000001054) #18	CMKLR2 (ENSMMUG00000008334) #19	ZDBF2 (ENSMMUG00000031276) #20	ADAM23 (ENSMMUG00000011641) #22	FAM237A (ENSMMUG00000052987) #23	DYTN (ENSMMUG00000048288) #24	MDH1B (ENSMMUG00000017734) #25	FASTKD2 (ENSMMUG00000017735) #27	CPO (ENSMMUG00000063052) #28	ENSMMUG00000051957 ##29	KLF7 (ENSMMUG00000000190) #29	CREB1 (ENSMMUG00000022601) #30	METTL21A (ENSMMUG00000022602) #31	CCNYL1 (ENSMMUG00000020211) #34	FZD5 (ENSMMUG00000057651) #35	PLEKHM3 (ENSMMUG00000008113)	ENSMMUG00000060339 #37	ENSMMUG00000059636	ENSMMUG00000045625
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000048556	ABI2 (ENSMFAG00000031286) #8	ENSMFAG00000003148 #9	ENSMFAG00000062324 #9	CD28 (ENSMFAG00000003864) #10	CTLA4 (ENSMFAG00000004047) #11	ICOS (ENSMFAG00000053159) #12	PARD3B (ENSMFAG00000043904) #14	NRP2 (ENSMFAG00000038385) #15	ENSMFAG00000053377 ##33	INO80D (ENSMFAG00000001629) #16	NDUFS1 (ENSMFAG00000039201) #17	ENSMFAG00000038364 #18	CMKLR2 (ENSMFAG00000013528) #19	ZDBF2 (ENSMFAG00000044616) #20	ADAM23 (ENSMFAG00000030094) #22	FAM237A (ENSMFAG00000031105) #23	DYTN (ENSMFAG00000044098) #24	MDH1B (ENSMFAG00000035811) #25	ENSMFAG00000049460 #26	FASTKD2 (ENSMFAG00000033471) #27	CPO (ENSMFAG00000062349) #28	KLF7 (ENSMFAG00000039083) #29	ENSMFAG00000041805 #31	CREB1 (ENSMFAG00000039629) #30	CCNYL1 (ENSMFAG00000001361) #34	ENSMFAG00000009381 #37	PLEKHM3 (ENSMFAG00000033450)	ENSMFAG00000064501 ##33	ENSMFAG00000065752	CRYGD (ENSMFAG00000052291)
Pig-tailed macaque	MODERN SPECIES	409	ABI2 (ENSMNEG00000028519) #8	RAPH1 (ENSMNEG00000030823) #9	ENSMNEG00000036304	CD28 (ENSMNEG00000033642) #10	ENSMNEG00000030427	CTLA4 (ENSMNEG00000043834) #11	ICOS (ENSMNEG00000029598) #12	PARD3B (ENSMNEG00000040103) #14	ENSMNEG00000031020	NRP2 (ENSMNEG00000039082) #15	INO80D (ENSMNEG00000032459) #16	NDUFS1 (ENSMNEG00000032822) #17	ENSMNEG00000030060 #18	ZDBF2 (ENSMNEG00000031863) #20	ENSMNEG00000028225 #21	ADAM23 (ENSMNEG00000027959) #22	FAM237A (ENSMNEG00000032870) #23	DYTN (ENSMNEG00000038040) #24	MDH1B (ENSMNEG00000043559) #25	FASTKD2 (ENSMNEG00000043091) #27	CPO (ENSMNEG00000008835) #28	KLF7 (ENSMNEG00000027996) #29	CREB1 (ENSMNEG00000030274) #30	METTL21A (ENSMNEG00000034465) #31	CCNYL1 (ENSMNEG00000035559) #34	FZD5 (ENSMNEG00000024425) #35	ENSMNEG00000045370	ENSMNEG00000028169	ENSMNEG00000044317 #37	PLEKHM3 (ENSMNEG00000044217)	ENSMNEG00000037076
Vervet Monkey	MODERN SPECIES	1	CYP20A1 (ENSCSAG00000010341) #7	ABI2 (ENSCSAG00000010327) #8	RAPH1 (ENSCSAG00000010318) #9	CD28 (ENSCSAG00000010308) #10	ENSCSAG00000010293	CTLA4 (ENSCSAG00000010288) #11	ICOS (ENSCSAG00000010281) #12	PARD3B (ENSCSAG00000010270) #14	NRP2 (ENSCSAG00000010258) #15	INO80D (ENSCSAG00000010251) #16	NDUFS1 (ENSCSAG00000010247) #17	ENSCSAG00000010238 ##18	CMKLR2 (ENSCSAG00000018769) #19	ZDBF2 (ENSCSAG00000010233) #20	ENSCSAG00000010220	ADAM23 (ENSCSAG00000010198) #22	DYTN (ENSCSAG00000010181) #24	MDH1B (ENSCSAG00000010163) #25	FASTKD2 (ENSCSAG00000010158) #27	CPO (ENSCSAG00000010143) #28	KLF7 (ENSCSAG00000010117) #29	CREB1 (ENSCSAG00000010111) #30	METTL21A (ENSCSAG00000010107) #31	CCNYL1 (ENSCSAG00000010093) #34	FZD5 (ENSCSAG00000018771) #35	PLEKHM3 (ENSCSAG00000010071)	CRYGD (ENSCSAG00000010066)	CRYGC (ENSCSAG00000010063)	CRYGB (ENSCSAG00000010058)	CRYGA (ENSCSAG00000010050)	C2orf80 (ENSCSAG00000010044)
Rhinopithecus	ANCESTRAL SPECIES	73	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.a.a #18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b.c #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Golden snub-nosed monkey	MODERN SPECIES	2758	RAPH1 (ENSRROG00000010278) #9	ENSRROG00000006311	ENSRROG00000034411	CD28 (ENSRROG00000043826) #10	ENSRROG00000034095	CTLA4 (ENSRROG00000028565) #11	ICOS (ENSRROG00000038288) #12	PARD3B (ENSRROG00000013717) #14	NRP2 (ENSRROG00000040911) #15	INO80D (ENSRROG00000003571) #16	NDUFS1 (ENSRROG00000033953) #17	ENSRROG00000041925 #18	CMKLR2 (ENSRROG00000015659) #19	ENSRROG00000038360	ZDBF2 (ENSRROG00000032109) #20	ADAM23 (ENSRROG00000036437) #22
Black snub-nosed monkey	MODERN SPECIES	1164									PARD3B (ENSRBIG00000039853) #14	NRP2 (ENSRBIG00000035417) #15	INO80D (ENSRBIG00000044868) #16	NDUFS1 (ENSRBIG00000020611) #17	ENSRBIG00000040112 #18	ENSRBIG00000031452	ZDBF2 (ENSRBIG00000033928) #20	ADAM23 (ENSRBIG00000032092) #22	FAM237A (ENSRBIG00000033114) #23	DYTN (ENSRBIG00000028505) #24	ENSRBIG00000025761 #25	FASTKD2 (ENSRBIG00000039778) #27	CPO (ENSRBIG00000037719) #28	KLF7 (ENSRBIG00000040855) #29
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.a.b ##18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00910000147537 #37	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Hominidae	ANCESTRAL SPECIES	17	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.a.b ##18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000147537 #37	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.a.b.a.a ##18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00950000182985.b.b.i.b.d.a	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000147537 #37	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.a.b.a.a ##18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00950000182985.b.b.i.b.d.a	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000147537 #37	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b
Pan	ANCESTRAL SPECIES	12	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.a.b.a.a ##18	ENSGT00940000160642 #19	ENSGT00390000015060.n	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.b #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00950000182985.b.b.i.b.d.a	ENSGT00940000154453.b.a.b.a #34	ENSGT00940000162639 #35	ENSGT00910000147537 #37	ENSGT00910000146869	ENSGT00940000159743	ENSGT00940000158720.c.b
Bonobo	MODERN SPECIES	15	CYP20A1 (ENSPPAG00000040724) #7	ABI2 (ENSPPAG00000030582) #8	RAPH1 (ENSPPAG00000024317) #9	ENSPPAG00000032675	CD28 (ENSPPAG00000034998) #10	CTLA4 (ENSPPAG00000041661) #11	ICOS (ENSPPAG00000037117) #12	PARD3B (ENSPPAG00000033958) #14	NRP2 (ENSPPAG00000041062) #15	ENSPPAG00000040957	INO80D (ENSPPAG00000017120) #16	NDUFS1 (ENSPPAG00000032284) #17	ENSPPAG00000033754 ##18	ENSPPAG00000031391	ZDBF2 (ENSPPAG00000038901) #20	ADAM23 (ENSPPAG00000030147) #22	FAM237A (ENSPPAG00000028915) #23	DYTN (ENSPPAG00000008787) #24	ENSPPAG00000031338 #25	FASTKD2 (ENSPPAG00000021300) #27	CPO (ENSPPAG00000033230) #28	KLF7 (ENSPPAG00000035305) #29	CREB1 (ENSPPAG00000042817) #30	METTL21A (ENSPPAG00000041715) #31	ENSPPAG00000010296	ENSPPAG00000029502	CCNYL1 (ENSPPAG00000034051) #34	FZD5 (ENSPPAG00000000897) #35	ENSPPAG00000004988 #37	ENSPPAG00000034737	PLEKHM3 (ENSPPAG00000028938)
Chimpanzee	MODERN SPECIES	15	ABI2 (ENSPTRG00000012830) #8	RAPH1 (ENSPTRG00000012831) #9	ENSPTRG00000043246	CD28 (ENSPTRG00000012833) #10	ENSPTRG00000051964	CTLA4 (ENSPTRG00000044793) #11	ICOS (ENSPTRG00000012837) #12	PARD3B (ENSPTRG00000012838) #14	NRP2 (ENSPTRG00000012839) #15	INO80D (ENSPTRG00000012841) #16	NDUFS1 (ENSPTRG00000012842) #17	EEF1B2 (ENSPTRG00000049619) ##18	CMKLR2 (ENSPTRG00000012844) #19	ENSPTRG00000052002	ZDBF2 (ENSPTRG00000029052) #20	ADAM23 (ENSPTRG00000012846) #22	FAM237A (ENSPTRG00000045763) #23	DYTN (ENSPTRG00000042355) #24	MDH1B (ENSPTRG00000012847) #25	FASTKD2 (ENSPTRG00000012848) #27	CPO (ENSPTRG00000012849) #28	KLF7 (ENSPTRG00000012850) #29	CREB1 (ENSPTRG00000043959) #30	METTL21A (ENSPTRG00000012852) #31	ENSPTRG00000045370	CCNYL1 (ENSPTRG00000012853) #34	FZD5 (ENSPTRG00000012855) #35	ENSPTRG00000049925 #37	ENSPTRG00000043594	PLEKHM3 (ENSPTRG00000012857)	ENSPTRG00000049376
Human	MODERN SPECIES	11	CARF (ENSG00000138380)	NBEAL1 (ENSG00000144426)	CYP20A1 (ENSG00000119004) #7	ABI2 (ENSG00000138443) #8	RAPH1 (ENSG00000173166) #9	CD28 (ENSG00000178562) #10	CTLA4 (ENSG00000163599) #11	ICOS (ENSG00000163600) #12	PARD3B (ENSG00000116117) #14	NRP2 (ENSG00000118257) #15	INO80D (ENSG00000114933) #16	NDUFS1 (ENSG00000023228) #17	EEF1B2 (ENSG00000114942) ##18	CMKLR2 (ENSG00000183671) #19	ZDBF2 (ENSG00000204186) #20	ADAM23 (ENSG00000114948) #22	FAM237A (ENSG00000235118) #23	DYTN (ENSG00000232125) #24	MDH1B (ENSG00000138400) #25	FASTKD2 (ENSG00000118246) #27	CPO (ENSG00000144410) #28	KLF7 (ENSG00000118263) #29	CREB1 (ENSG00000118260) #30	METTL21A (ENSG00000144401) #31	CCNYL1 (ENSG00000163249) #34	FZD5 (ENSG00000163251) #35	PLEKHM3 (ENSG00000178385)	CRYGD (ENSG00000118231)	CRYGC (ENSG00000163254)	CRYGB (ENSG00000182187)	CRYGA (ENSG00000168582)
Gorilla	MODERN SPECIES	15	ABI2 (ENSGGOG00000016384) #8	RAPH1 (ENSGGOG00000016399) #9	ENSGGOG00000023735	CD28 (ENSGGOG00000041735) #10	ENSGGOG00000039900	CTLA4 (ENSGGOG00000007961) #11	ICOS (ENSGGOG00000014097) #12	PARD3B (ENSGGOG00000034911) #14	NRP2 (ENSGGOG00000009537) #15	INO80D (ENSGGOG00000015570) #16	NDUFS1 (ENSGGOG00000001513) #17	EEF1B2 (ENSGGOG00000007002) ##18	ENSGGOG00000042195	ZDBF2 (ENSGGOG00000023142) #20	ENSGGOG00000024971	ADAM23 (ENSGGOG00000012509) #22	FAM237A (ENSGGOG00000037017) #23	DYTN (ENSGGOG00000027242) #24	MDH1B (ENSGGOG00000002059) #25	FASTKD2 (ENSGGOG00000002062) #27	CPO (ENSGGOG00000016053) #28	KLF7 (ENSGGOG00000009338) #29	CREB1 (ENSGGOG00000024394) #30	METTL21A (ENSGGOG00000015815) #31	ENSGGOG00000022138	CCNYL1 (ENSGGOG00000039803) #34	FZD5 (ENSGGOG00000042758) #35	ENSGGOG00000043005	PLEKHM3 (ENSGGOG00000000998)	ENSGGOG00000040001	CRYGD (ENSGGOG00000027001)
Orangutan	MODERN SPECIES	15	NBEAL1 (ENSPPYG00000013092)	CYP20A1 (ENSPPYG00000013093) #7	ABI2 (ENSPPYG00000013094) #8	RAPH1 (ENSPPYG00000013096) #9	CD28 (ENSPPYG00000039922) #10	CTLA4 (ENSPPYG00000036623) #11	ICOS (ENSPPYG00000013100) #12	PARD3B (ENSPPYG00000013101) #14	NRP2 (ENSPPYG00000013102) #15	INO80D (ENSPPYG00000013104) #16	ENSPPYG00000038957 ##33	NDUFS1 (ENSPPYG00000013106) #17	EEF1B2 (ENSPPYG00000013107) ##18	CMKLR2 (ENSPPYG00000013108) #19	ZDBF2 (ENSPPYG00000013109) #20	ADAM23 (ENSPPYG00000013110) #22	FAM237A (ENSPPYG00000036282) #23	DYTN (ENSPPYG00000031262) #24	MDH1B (ENSPPYG00000013111) #25	FASTKD2 (ENSPPYG00000013112) #27	CPO (ENSPPYG00000013113) #28	KLF7 (ENSPPYG00000013114) #29	CREB1 (ENSPPYG00000013115) #30	METTL21A (ENSPPYG00000013116) #31	CCNYL1 (ENSPPYG00000013118) #34	FZD5 (ENSPPYG00000013119) #35	ENSPPYG00000013120 #37	PLEKHM3 (ENSPPYG00000013121)	ENSPPYG00000040257	CRYGC (ENSPPYG00000035452)	CRYGB (ENSPPYG00000013386)
Gibbon	MODERN SPECIES	14	RAPH1 (ENSNLEG00000007048) #9	ENSNLEG00000030127	ENSNLEG00000035533	ENSNLEG00000029125	CD28 (ENSNLEG00000007057) #10	CTLA4 (ENSNLEG00000007059) #11	ICOS (ENSNLEG00000007065) #12	ENSNLEG00000007066 #14	ENSNLEG00000036209 #14	NRP2 (ENSNLEG00000007071) #15	INO80D (ENSNLEG00000032256) #16	NDUFS1 (ENSNLEG00000007090) #17	ENSNLEG00000007098 ##18	ENSNLEG00000033131	ZDBF2 (ENSNLEG00000007100) #20	ADAM23 (ENSNLEG00000007102) #22	FAM237A (ENSNLEG00000007112) #23	DYTN (ENSNLEG00000007113) #24	MDH1B (ENSNLEG00000007114) #25	FASTKD2 (ENSNLEG00000007116) #27	CPO (ENSNLEG00000007121) #28	KLF7 (ENSNLEG00000035258) #29	CREB1 (ENSNLEG00000007124) #30	METTL21A (ENSNLEG00000007129) #31	CCNYL1 (ENSNLEG00000007131) #34	FZD5 (ENSNLEG00000029167) #35	ENSNLEG00000035287	ENSNLEG00000031847 #37	ENSNLEG00000032494	PLEKHM3 (ENSNLEG00000007136)	ENSNLEG00000035688
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00390000001455.`b.a	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.b.b ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.a ##29	ENSGT00940000155408 #30	ENSGT00940000157249.c #31	ENSGT00940000157249.d #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000158720.c.b
Mas night monkey	MODERN SPECIES	357	CYP20A1 (ENSANAG00000026608) #7	ABI2 (ENSANAG00000037183) #8	RAPH1 (ENSANAG00000037926) #9	CD28 (ENSANAG00000027528) #10	CTLA4 (ENSANAG00000027709) #11	ICOS (ENSANAG00000027294) #12	ENSANAG00000037162	ENSANAG00000037079	PARD3B (ENSANAG00000024698) #14	NRP2 (ENSANAG00000033490) #15	ENSANAG00000037758	INO80D (ENSANAG00000029568) #16	NDUFS1 (ENSANAG00000020079) #17	ENSANAG00000024356 ##18	ZDBF2 (ENSANAG00000020305) #20	ADAM23 (ENSANAG00000035087) #22	FAM237A (ENSANAG00000024386) #23	DYTN (ENSANAG00000031986) #24	MDH1B (ENSANAG00000008683) #25	FASTKD2 (ENSANAG00000034550) #27	CPO (ENSANAG00000023194) #28	KLF7 (ENSANAG00000036279) #29	CREB1 (ENSANAG00000025888) #30	ENSANAG00000020586 #31	CCNYL1 (ENSANAG00000020995) #34	FZD5 (ENSANAG00000014539) #35	PLEKHM3 (ENSANAG00000028108)	ENSANAG00000009967	CRYGD (ENSANAG00000036850)	CRYGC (ENSANAG00000035987)	CRYGB (ENSANAG00000001941)
Cebidae	ANCESTRAL SPECIES	11	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00390000001455.`b.a	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.b.b.a ##18	ENSGT00940000160642 #19	ENSGT00950000183014.f.a.g.b.b.b.b ##18	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.a ##29	ENSGT00940000155408 #30	ENSGT00940000157249.c #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Marmoset	MODERN SPECIES	18	RAPH1 (ENSCJAG00000005339) #9	CD28 (ENSCJAG00000042321) #10	CTLA4 (ENSCJAG00000005495) #11	ICOS (ENSCJAG00000005516) #12	PARD3B (ENSCJAG00000005521) #14	ENSCJAG00000076910 ##13	NRP2 (ENSCJAG00000005577) #15	ENSCJAG00000045767	INO80D (ENSCJAG00000005682) #16	NDUFS1 (ENSCJAG00000005725) #17	ENSCJAG00000005805 ##18	CMKLR2 (ENSCJAG00000077852) #19	ENSCJAG00000079037	ENSCJAG00000085853	ZDBF2 (ENSCJAG00000005812) #20	ADAM23 (ENSCJAG00000005821) #22	DYTN (ENSCJAG00000005926) #24	MDH1B (ENSCJAG00000005953) #25	FASTKD2 (ENSCJAG00000005971) #27	ENSCJAG00000073541	CPO (ENSCJAG00000005991) #28	ENSCJAG00000006023 ##29	CREB1 (ENSCJAG00000006039) #30	ENSCJAG00000086572 ##13	METTL21A (ENSCJAG00000006072) #31	CCNYL1 (ENSCJAG00000002901) #34	FZD5 (ENSCJAG00000022490) #35	PLEKHM3 (ENSCJAG00000002896)	ENSCJAG00000073032	ENSCJAG00000080445	ENSCJAG00000077681 ##33
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00390000000685.o.b.a	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00390000001455.`b.a	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.b.b.a ##18	ENSGT00950000183014.f.a.g.b.b.b.b ##18	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235.g.a ##29	ENSGT00940000155408 #30	ENSGT00940000157249.c #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00910000146869	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a
Bolivian squirrel monkey	MODERN SPECIES	56	CYP20A1 (ENSSBOG00000025384) #7	ABI2 (ENSSBOG00000031443) #8	RAPH1 (ENSSBOG00000036069) #9	ENSSBOG00000030839	CD28 (ENSSBOG00000032327) #10	ENSSBOG00000030167	CTLA4 (ENSSBOG00000034817) #11	ICOS (ENSSBOG00000000744) #12	PARD3B (ENSSBOG00000029267) #14	NRP2 (ENSSBOG00000035290) #15	ENSSBOG00000034794	INO80D (ENSSBOG00000020878) #16	NDUFS1 (ENSSBOG00000028426) #17	ENSSBOG00000036258 ##18	ZDBF2 (ENSSBOG00000011111) #20	ADAM23 (ENSSBOG00000001918) #22	FAM237A (ENSSBOG00000033809) #23	DYTN (ENSSBOG00000026100) #24	MDH1B (ENSSBOG00000029880) #25	FASTKD2 (ENSSBOG00000029513) #27	CPO (ENSSBOG00000030310) #28	ENSSBOG00000027628 ##29	ENSSBOG00000018885	CREB1 (ENSSBOG00000034085) #30	ENSSBOG00000033378 #31	CCNYL1 (ENSSBOG00000034567) #34	ENSSBOG00000031757	PLEKHM3 (ENSSBOG00000027559)	ENSSBOG00000020159	CRYGC (ENSSBOG00000026600)	CRYGB (ENSSBOG00000023184)
Capuchin	MODERN SPECIES	101	ABI2 (ENSCCAG00000027705) #8	RAPH1 (ENSCCAG00000029188) #9	ENSCCAG00000031812	CD28 (ENSCCAG00000035864) #10	CTLA4 (ENSCCAG00000029978) #11	ICOS (ENSCCAG00000019210) #12	PARD3B (ENSCCAG00000034949) #14	NRP2 (ENSCCAG00000026361) #15	ENSCCAG00000029458	LSM5 (ENSCCAG00000032792)	INO80D (ENSCCAG00000028441) #16	NDUFS1 (ENSCCAG00000021875) #17	ENSCCAG00000033644 ##18	ENSCCAG00000029547	ZDBF2 (ENSCCAG00000026606) #20	ADAM23 (ENSCCAG00000031476) #22	FAM237A (ENSCCAG00000025434) #23	DYTN (ENSCCAG00000036386) #24
Tarsier	MODERN SPECIES	3332																ADAM23 (ENSTSYG00000010297) #22
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Bushbaby	MODERN SPECIES	128	CYP20A1 (ENSOGAG00000015164) #7	ENSOGAG00000033059	ABI2 (ENSOGAG00000011602) #8	RAPH1 (ENSOGAG00000015099) #9	CD28 (ENSOGAG00000012567) #10	CTLA4 (ENSOGAG00000002578) #11	PARD3B (ENSOGAG00000007396) #14	NRP2 (ENSOGAG00000007405) #15	INO80D (ENSOGAG00000005756) #16	NDUFS1 (ENSOGAG00000011226) #17	EEF1B2 (ENSOGAG00000011229) ##18	CMKLR2 (ENSOGAG00000011232) #19	ENSOGAG00000031172	ZDBF2 (ENSOGAG00000016996) #20	ENSOGAG00000031644	ADAM23 (ENSOGAG00000016997) #22	DYTN (ENSOGAG00000027434) #24	MDH1B (ENSOGAG00000017006) #25	FASTKD2 (ENSOGAG00000017008) #27	CPO (ENSOGAG00000017012) #28	KLF7 (ENSOGAG00000017014) #29	CREB1 (ENSOGAG00000007121) #30	METTL21A (ENSOGAG00000007128) #31	ENSOGAG00000003673 ##34	FZD5 (ENSOGAG00000003677) #35	PLEKHM3 (ENSOGAG00000003678)	ENSOGAG00000031869	ENSOGAG00000031316	CRYGD (ENSOGAG00000025720)	CRYGC (ENSOGAG00000014846)	ENSOGAG00000014842
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Mouse lemur	MODERN SPECIES	30	ENSMICG00000026752	NBEAL1 (ENSMICG00000003736)	CYP20A1 (ENSMICG00000010806) #7	ABI2 (ENSMICG00000048062) #8	RAPH1 (ENSMICG00000001085) #9	CD28 (ENSMICG00000044645) #10	CTLA4 (ENSMICG00000032206) #11	ICOS (ENSMICG00000037046) #12	PARD3B (ENSMICG00000009358) #14	NRP2 (ENSMICG00000009376) #15	ENSMICG00000044290	INO80D (ENSMICG00000010590) #16	NDUFS1 (ENSMICG00000010601) #17	EEF1B2 (ENSMICG00000047922) ##18	ZDBF2 (ENSMICG00000044925) #20	ADAM23 (ENSMICG00000009477) #22	FAM237A (ENSMICG00000044768) #23	DYTN (ENSMICG00000027944) #24	MDH1B (ENSMICG00000009487) #25	FASTKD2 (ENSMICG00000026515) #27	CPO (ENSMICG00000015370) #28	KLF7 (ENSMICG00000037405) #29	CREB1 (ENSMICG00000009731) #30	METTL21A (ENSMICG00000009739) #31	ENSMICG00000009744 ##34	FZD5 (ENSMICG00000044967) #35	PLEKHM3 (ENSMICG00000009771)	ENSMICG00000045926	CRYGD (ENSMICG00000043795)	CRYGC (ENSMICG00000037493)	ENSMICG00000033287
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Greater bamboo lemur	MODERN SPECIES	72														ZDBF2 (ENSPSMG00000007318) #20	ENSPSMG00000007324	ADAM23 (ENSPSMG00000007400) #22	FAM237A (ENSPSMG00000007448) #23	DYTN (ENSPSMG00000007453) #24	MDH1B (ENSPSMG00000007477) #25	FASTKD2 (ENSPSMG00000007493) #27	CPO (ENSPSMG00000007503) #28	KLF7 (ENSPSMG00000007540) #29	METTL21A (ENSPSMG00000007593) #31	ENSPSMG00000007649 ##34	FZD5 (ENSPSMG00000007673) #35	ENSPSMG00000007677	PLEKHM3 (ENSPSMG00000007709)	ENSPSMG00000007717	CRYGD (ENSPSMG00000007725)	CRYGC (ENSPSMG00000007741)	ENSPSMG00000007746
Coquerels sifaka	MODERN SPECIES	847									PARD3B (ENSPCOG00000018611) #14	NRP2 (ENSPCOG00000020112) #15	INO80D (ENSPCOG00000024934) #16	ENSPCOG00000018961 #17	EEF1B2 (ENSPCOG00000016289) ##18	ENSPCOG00000013632	ZDBF2 (ENSPCOG00000019226) #20	ADAM23 (ENSPCOG00000023473) #22	FAM237A (ENSPCOG00000018015) #23	DYTN (ENSPCOG00000020018) #24	MDH1B (ENSPCOG00000017083) #25	FASTKD2 (ENSPCOG00000028714) #27	CPO (ENSPCOG00000028646) #28	KLF7 (ENSPCOG00000018231) #29	CREB1 (ENSPCOG00000021255) #30	METTL21A (ENSPCOG00000018442) #31	ENSPCOG00000013286 ##34	FZD5 (ENSPCOG00000011393) #35	PLEKHM3 (ENSPCOG00000024736)	ENSPCOG00000017843	CRYGC (ENSPCOG00000004093)	ENSPCOG00000022043	CRYGA (ENSPCOG00000028701)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000163272.a.a	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Tree shrew	MODERN SPECIES	580																ADAM23 (ENSTBEG00000009883) #22	ENSTBEG00000010847
Glires	ANCESTRAL SPECIES	14	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000163272.a.a	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT00940000155041.ob	ENSGT00940000155041.nb	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.a	ENSGT00940000158720.d	ENSGT00940000156190.h	ENSGT00390000004840	ENSGT00390000012547.b
Rabbit	MODERN SPECIES	18	CYP20A1 (ENSOCUG00000008054) #7	ENSOCUG00000008062 #8	ENSOCUG00000016722 #9	CD28 (ENSOCUG00000016134) #10	ENSOCUG00000030918	CTLA4 (ENSOCUG00000017274) #11	ICOS (ENSOCUG00000001858) #12	PARD3B (ENSOCUG00000007959) #14	NRP2 (ENSOCUG00000007978) #15	INO80D (ENSOCUG00000014786) #16	ENSOCUG00000009848 ##18	NDUFS1 (ENSOCUG00000012368) #17	CMKLR2 (ENSOCUG00000012384) #19	ENSOCUG00000024602	ENSOCUG00000009421 #20	ADAM23 (ENSOCUG00000010659) #22	DYTN (ENSOCUG00000021490) #24	MDH1B (ENSOCUG00000010506) #25	ENSOCUG00000010515 #27	CPO (ENSOCUG00000009806) #28	KLF7 (ENSOCUG00000009813) #29	ENSOCUG00000027419	CREB1 (ENSOCUG00000005427) #30	ENSOCUG00000005431 #31	ENSOCUG00000015013 ##34	FZD5 (ENSOCUG00000027916) #35	ENSOCUG00000036167	PLEKHM3 (ENSOCUG00000015383)	CRYGD (ENSOCUG00000029414)	CRYGA (ENSOCUG00000010973)	C2orf80 (ENSOCUG00000010976)
Pika	MODERN SPECIES	4573															ENSOPRG00000002455 #20	ADAM23 (ENSOPRG00000002473) #22
Rodentia	ANCESTRAL SPECIES	14	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005000686	ENSSVLG00005000784	NBEAL1 (ENSSVLG00005000853)	CYP20A1 (ENSSVLG00005000970) #7	ABI2 (ENSSVLG00005001071) #8	CD28 (ENSSVLG00005001473) #10	CTLA4 (ENSSVLG00005001529) #11	ICOS (ENSSVLG00005001570) #12	PARD3B (ENSSVLG00005001789) #14	NRP2 (ENSSVLG00005002141) #15	INO80D (ENSSVLG00005002283) #16	ENSSVLG00005002396 #17	ENSSVLG00005002606 ##18	CMKLR2 (ENSSVLG00005002631) #19	ENSSVLG00005002653 #20	ADAM23 (ENSSVLG00005002721) #22	FAM237A (ENSSVLG00005002854) #23	DYTN (ENSSVLG00005002873) #24	MDH1B (ENSSVLG00005002924) #25	FASTKD2 (ENSSVLG00005002985) #27	CPO (ENSSVLG00005003015) #28	KLF7 (ENSSVLG00005003049) #29	CREB1 (ENSSVLG00005003093) #30	METTL21A (ENSSVLG00005003134) #31	ENSSVLG00005003181 #34	FZD5 (ENSSVLG00005003258) #35	PLEKHM3 (ENSSVLG00005003272)	ENSSVLG00005003291	ENSSVLG00005003302	CRYGD (ENSSVLG00005003312)	CRYGC (ENSSVLG00005003325)
Marmotini	ANCESTRAL SPECIES	2	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.g ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a	ENSGT00940000156190.h
Alpin marmot	MODERN SPECIES	8	NBEAL1 (ENSMMMG00000013229)	CYP20A1 (ENSMMMG00000013312) #7	ABI2 (ENSMMMG00000013329) #8	ENSMMMG00000013568 #9	CD28 (ENSMMMG00000013599) #10	CTLA4 (ENSMMMG00000013609) #11	ICOS (ENSMMMG00000013624) #12	PARD3B (ENSMMMG00000013680) #14	ENSMMMG00000013911	NRP2 (ENSMMMG00000013924) #15	INO80D (ENSMMMG00000014555) #16	NDUFS1 (ENSMMMG00000014566) #17	ENSMMMG00000014596 ##18	CMKLR2 (ENSMMMG00000014632) #19	ZDBF2 (ENSMMMG00000014650) #20	ADAM23 (ENSMMMG00000014678) #22	FAM237A (ENSMMMG00000014819) #23	DYTN (ENSMMMG00000014828) #24	ENSMMMG00000014844	MDH1B (ENSMMMG00000014852) #25	FASTKD2 (ENSMMMG00000014857) #27	CPO (ENSMMMG00000014874) #28	KLF7 (ENSMMMG00000014897) #29	CREB1 (ENSMMMG00000014914) #30	METTL21A (ENSMMMG00000015010) #31	CCNYL1 (ENSMMMG00000015025) #34	ENSMMMG00000015050	PLEKHM3 (ENSMMMG00000015063)	ENSMMMG00000015075	CRYGC (ENSMMMG00000015089)	CRYGB (ENSMMMG00000015095)
Marmotini_b	ANCESTRAL SPECIES	103	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.g ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.b
Arctic ground squirrel	MODERN SPECIES	141		CYP20A1 (ENSUPAG00010007092) #7	ABI2 (ENSUPAG00010007107) #8	RAPH1 (ENSUPAG00010007232) #9	ENSUPAG00010007347	CD28 (ENSUPAG00010007360) #10	CTLA4 (ENSUPAG00010007371) #11	ICOS (ENSUPAG00010007386) #12	PARD3B (ENSUPAG00010007426) #14	NRP2 (ENSUPAG00010007567) #15	INO80D (ENSUPAG00010007624) #16	NDUFS1 (ENSUPAG00010007661) #17	EEF1B2 (ENSUPAG00010007678) ##18	CMKLR2 (ENSUPAG00010007707) #19	ZDBF2 (ENSUPAG00010007725) #20	ADAM23 (ENSUPAG00010007731) #22	FAM237A (ENSUPAG00010007856) #23	DYTN (ENSUPAG00010007862) #24	MDH1B (ENSUPAG00010007886) #25	FASTKD2 (ENSUPAG00010007916) #27	CPO (ENSUPAG00010007941) #28	KLF7 (ENSUPAG00010007967) #29	CREB1 (ENSUPAG00010007984) #30	METTL21A (ENSUPAG00010008009) #31	CCNYL1 (ENSUPAG00010008021) #34	FZD5 (ENSUPAG00010008046) #35	PLEKHM3 (ENSUPAG00010008049)	ENSUPAG00010008065
Squirrel	MODERN SPECIES	231				ABI2 (ENSSTOG00000015888) #8	RAPH1 (ENSSTOG00000028594) #9	CD28 (ENSSTOG00000026213) #10	CTLA4 (ENSSTOG00000020540) #11	ICOS (ENSSTOG00000013542) #12	PARD3B (ENSSTOG00000010207) #14	NRP2 (ENSSTOG00000010229) #15	INO80D (ENSSTOG00000028419) #16	NDUFS1 (ENSSTOG00000010255) #17	EEF1B2 (ENSSTOG00000005437) ##18	CMKLR2 (ENSSTOG00000005452) #19	ZDBF2 (ENSSTOG00000001663) #20	ADAM23 (ENSSTOG00000024094) #22	DYTN (ENSSTOG00000019822) #24	MDH1B (ENSSTOG00000003194) #25	FASTKD2 (ENSSTOG00000022821) #27	CPO (ENSSTOG00000013351) #28	KLF7 (ENSSTOG00000011069) #29	CREB1 (ENSSTOG00000016482) #30	METTL21A (ENSSTOG00000016483) #31	ENSSTOG00000021511	CCNYL1 (ENSSTOG00000016484) #34	FZD5 (ENSSTOG00000028314) #35	PLEKHM3 (ENSSTOG00000016489)	ENSSTOG00000034608
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000159232.h.b	ENSGT00940000156190.g	ENSGT00940000156190.h	ENSGT00390000004840
Naked mole-rat female	MODERN SPECIES	17	CD28 (ENSHGLG00000037192) #10	CTLA4 (ENSHGLG00000009115) #11	ICOS (ENSHGLG00000008777) #12	ENSHGLG00000043313	ENSHGLG00000016877	ENSHGLG00000048100	PARD3B (ENSHGLG00000004982) #14	NRP2 (ENSHGLG00000010562) #15	ENSHGLG00000049876	INO80D (ENSHGLG00000018537) #16	NDUFS1 (ENSHGLG00000015179) #17	EEF1B2 (ENSHGLG00000015147) ##18	ENSHGLG00000045433	CMKLR2 (ENSHGLG00000046982) #19	ENSHGLG00000044712 #20	ADAM23 (ENSHGLG00000006393) #22	FAM237A (ENSHGLG00000030355) #23	ENSHGLG00000005368	MDH1B (ENSHGLG00000004936) #25	FASTKD2 (ENSHGLG00000004761) #27	ENSHGLG00000045814	KLF7 (ENSHGLG00000044157) #29	ENSHGLG00000017319	ENSHGLG00000047324	ENSHGLG00000011676 #30	ENSHGLG00000010806 #31	ENSHGLG00000007598	ENSHGLG00000035240	ENSHGLG00000048045	ENSHGLG00000044286	ENSHGLG00000034881 ##34
Hystricomorpha_a	ANCESTRAL SPECIES	67	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000159232.h.b	ENSGT00940000156190.g	ENSGT00940000156190.h	ENSGT00390000004840	ENSGT00390000012547.b.d	ENSGT00940000156307.b
Guinea pig	MODERN SPECIES	13	WDR12 (ENSCPOG00000008824)	CARF (ENSCPOG00000008827)	NBEAL1 (ENSCPOG00000008009)	CYP20A1 (ENSCPOG00000009758) #7	ABI2 (ENSCPOG00000007562) #8	RAPH1 (ENSCPOG00000020239) #9	CD28 (ENSCPOG00000035938) #10	CTLA4 (ENSCPOG00000019534) #11	ICOS (ENSCPOG00000030931) #12	ENSCPOG00000030358	PARD3B (ENSCPOG00000004380) #14	NRP2 (ENSCPOG00000004390) #15	ENSCPOG00000010964 #16	NDUFS1 (ENSCPOG00000005555) #17	EEF1B2 (ENSCPOG00000014496) ##18	ADAM23 (ENSCPOG00000005871) #22	MDH1B (ENSCPOG00000005608) #25	FASTKD2 (ENSCPOG00000005624) #27	KLF7 (ENSCPOG00000009080) #29	CREB1 (ENSCPOG00000010778) #30	METTL21A (ENSCPOG00000034803) #31	ENSCPOG00000035156 ##34	FZD5 (ENSCPOG00000038146) #35	PLEKHM3 (ENSCPOG00000004119)	CRYGC (ENSCPOG00000000186)	ENSCPOG00000022025	CRYGA (ENSCPOG00000015047)	C2orf80 (ENSCPOG00000015050)	IDH1 (ENSCPOG00000013587)	PIKFYVE (ENSCPOG00000003863)	PTH2R (ENSCPOG00000027198)
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000159232.h.b	ENSGT00940000156190.g	ENSGT00940000156190.h	ENSGT00390000004840	ENSGT00390000012547.b.d	ENSGT00940000156307.b
Long-tailed chinchilla	MODERN SPECIES	164	ENSCLAG00000006025	ENSCLAG00000004760	ABI2 (ENSCLAG00000004021) #8	ENSCLAG00000003175 #9	CD28 (ENSCLAG00000004670) #10	CTLA4 (ENSCLAG00000004042) #11	ICOS (ENSCLAG00000003964) #12	PARD3B (ENSCLAG00000010240) #14	NRP2 (ENSCLAG00000009120) #15	INO80D (ENSCLAG00000006191) #16	NDUFS1 (ENSCLAG00000009634) #17	EEF1B2 (ENSCLAG00000009181) ##18	CMKLR2 (ENSCLAG00000008973) #19	ENSCLAG00000008490	ATXN3L (ENSCLAG00000005825)	ADAM23 (ENSCLAG00000004674) #22	DYTN (ENSCLAG00000003705) #24	MDH1B (ENSCLAG00000003385) #25	FASTKD2 (ENSCLAG00000007036) #27	KLF7 (ENSCLAG00000006083) #29	CREB1 (ENSCLAG00000005853) #30	METTL21A (ENSCLAG00000005572) #31	ENSCLAG00000005432	ENSCLAG00000004502 ##34	FZD5 (ENSCLAG00000008821) #35	PLEKHM3 (ENSCLAG00000010825)	CRYGC (ENSCLAG00000010342)	ENSCLAG00000010298	CRYGA (ENSCLAG00000013039)	C2orf80 (ENSCLAG00000012137)	IDH1 (ENSCLAG00000013186)
Degu	MODERN SPECIES	57	ENSODEG00000013477 #9	CTLA4 (ENSODEG00000009327) #11	ENSODEG00000010295	ICOS (ENSODEG00000011327) #12	ENSODEG00000009131	ENSODEG00000010021	PARD3B (ENSODEG00000012523) #14	ENSODEG00000010455 #15	INO80D (ENSODEG00000009769) #16	ENSODEG00000019630	ENSODEG00000008842 #17	ENSODEG00000009030 #17	ENSODEG00000008974 #17	ENSODEG00000010229 ##18	ENSODEG00000019757	ADAM23 (ENSODEG00000011161) #22	DYTN (ENSODEG00000009029) #24	MDH1B (ENSODEG00000009494) #25	FASTKD2 (ENSODEG00000009880) #27	KLF7 (ENSODEG00000010345) #29	ENSODEG00000009956	ENSODEG00000009302	CREB1 (ENSODEG00000010264) #30	METTL21A (ENSODEG00000009859) #31	ENSODEG00000009393 ##34	FZD5 (ENSODEG00000019794) #35	PLEKHM3 (ENSODEG00000010028)	ENSODEG00000019703	ENSODEG00000019682	CRYGC (ENSODEG00000008672)	ENSODEG00000009966
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Kangaroo rat	MODERN SPECIES	320	Nbeal1 (ENSDORG00000015714)	Cyp20a1 (ENSDORG00000015715) #7	ENSDORG00000028647	Abi2 (ENSDORG00000028252) #8	ENSDORG00000007525 #9	Cd28 (ENSDORG00000013428) #10	Ctla4 (ENSDORG00000008556) #11	Icos (ENSDORG00000010237) #12	ENSDORG00000029364	Pard3b (ENSDORG00000014139) #14	ENSDORG00000029450 #15	Ino80d (ENSDORG00000027999) #16	ENSDORG00000025350 #17	ENSDORG00000023550 #17	Cmklr2 (ENSDORG00000013107) #19	Adam23 (ENSDORG00000015422) #22	Dytn (ENSDORG00000028814) #24	Mdh1b (ENSDORG00000011290) #25	Fastkd2 (ENSDORG00000011295) #27	Klf7 (ENSDORG00000009634) #29	Creb1 (ENSDORG00000012535) #30	Mettl21a (ENSDORG00000012543) #31	Ccnyl1 (ENSDORG00000009933) ##34	Fzd5 (ENSDORG00000027490) #35	ENSDORG00000023690	Plekhm3 (ENSDORG00000029697)	ENSDORG00000027705	Crygd (ENSDORG00000003876)	Crygc (ENSDORG00000023173)	ENSDORG00000023215	Cryga (ENSDORG00000028587)
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Muroidea	ANCESTRAL SPECIES	20	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a	ENSGT00940000156190.h
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a	ENSGT00940000156190.h
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a	ENSGT00940000156190.h
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000156190.g	ENSGT00940000156190.h
Chinese hamster chok1gshd	MODERN SPECIES	1	Carf (ENSCGRG00001016848)	Nbeal1 (ENSCGRG00001018313)	Cyp20a1 (ENSCGRG00001018508) #7	Abi2 (ENSCGRG00001017572) #8	Raph1 (ENSCGRG00001019075) #9	Cd28 (ENSCGRG00001021553) #10	Ctla4 (ENSCGRG00001017244) #11	Icos (ENSCGRG00001016804) #12	Pard3b (ENSCGRG00001023180) #14	Nrp2 (ENSCGRG00001001140) #15	Ino80d (ENSCGRG00001020225) #16	Ndufs1 (ENSCGRG00001018185) #17	Eef1b2 (ENSCGRG00001017503) ##18	Cmklr2 (ENSCGRG00001010463) #19	Zdbf2 (ENSCGRG00001018156) #20	Adam23 (ENSCGRG00001021362) #22	Gm39653 (ENSCGRG00001017288) #23	Dytn (ENSCGRG00001017611) #24	Mdh1b (ENSCGRG00001017642) #25	Fastkd2 (ENSCGRG00001020432) #27	Klf7 (ENSCGRG00001018794) #29	ENSCGRG00001018665	Creb1 (ENSCGRG00001018838) #30	Mettl21a (ENSCGRG00001017438) #31	Ccnyl1 (ENSCGRG00001017467) ##34	Fzd5 (ENSCGRG00001010794) #35	Plekhm3 (ENSCGRG00001023068)	ENSCGRG00001020657	Crygd (ENSCGRG00001020195)	Crygc (ENSCGRG00001020149)	ENSCGRG00001020560
Golden Hamster	MODERN SPECIES	640	ENSMAUG00000007926	ENSMAUG00000001805	ENSMAUG00000007020 #7	Abi2 (ENSMAUG00000016724) #8	ENSMAUG00000008616 #9	Cd28 (ENSMAUG00000020132) #10	Ctla4 (ENSMAUG00000017208) #11	Icos (ENSMAUG00000019187) #12	Pard3b (ENSMAUG00000019516) #14	Nrp2 (ENSMAUG00000020662) #15	Ino80d (ENSMAUG00000012087) #16	ENSMAUG00000017015 #17	Eef1b2 (ENSMAUG00000011478) ##18	Cmklr2 (ENSMAUG00000009931) #19	Zdbf2 (ENSMAUG00000017491) #20	Adam23 (ENSMAUG00000012410) #22	Dytn (ENSMAUG00000021422) #24	Mdh1b (ENSMAUG00000016431) #25	Fastkd2 (ENSMAUG00000009136) #27	Klf7 (ENSMAUG00000022037) #29	Creb1 (ENSMAUG00000018215) #30	Mettl21a (ENSMAUG00000020877) #31	Fzd5 (ENSMAUG00000022033) #35	Plekhm3 (ENSMAUG00000021638)	ENSMAUG00000022028	Crygd (ENSMAUG00000020101)	Crygc (ENSMAUG00000009964)	ENSMAUG00000022086	Cryga (ENSMAUG00000019430)	D630023F18Rik (ENSMAUG00000022108)	ENSMAUG00000001360
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.a	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a	ENSGT00940000156190.h
Prairie vole	MODERN SPECIES	354	Fbxo36 (ENSMOCG00000015360)	Slc16a14 (ENSMOCG00000006969)	Nbeal1 (ENSMOCG00000015319)	Abi2 (ENSMOCG00000013762) #8	Raph1 (ENSMOCG00000016577) #9	Cd28 (ENSMOCG00000003240) #10	Ctla4 (ENSMOCG00000018484) #11	ENSMOCG00000017292	Icos (ENSMOCG00000008578) #12	Pard3b (ENSMOCG00000021107) #14	Nrp2 (ENSMOCG00000018160) #15	Ino80d (ENSMOCG00000022487) #16	Ndufs1 (ENSMOCG00000018918) #17	Eef1b2 (ENSMOCG00000004803) ##18	Zdbf2 (ENSMOCG00000021962) #20	Adam23 (ENSMOCG00000012227) #22	ENSMOCG00000001238	Dytn (ENSMOCG00000015652) #24	Mdh1b (ENSMOCG00000001314) #25	Fastkd2 (ENSMOCG00000019859) #27	ENSMOCG00000008631	Klf7 (ENSMOCG00000009593) #29	Creb1 (ENSMOCG00000002192) #30	Mettl21a (ENSMOCG00000017410) #31	Ccnyl1 (ENSMOCG00000016018) ##34	Fzd5 (ENSMOCG00000013581) #35	Plekhm3 (ENSMOCG00000013149)	ENSMOCG00000018497	Crygd (ENSMOCG00000018181)	Crygc (ENSMOCG00000017760)	ENSMOCG00000015565
Northern American deer mouse	MODERN SPECIES	4	ENSPEMG00000028509	Nbeal1 (ENSPEMG00000029402)	Cyp20a1 (ENSPEMG00000023627) #7	Abi2 (ENSPEMG00000020443) #8	Raph1 (ENSPEMG00000022086) #9	Cd28 (ENSPEMG00000028537) #10	Ctla4 (ENSPEMG00000020722) #11	Icos (ENSPEMG00000015472) #12	Pard3b (ENSPEMG00000020745) #14	Nrp2 (ENSPEMG00000020944) #15	Ino80d (ENSPEMG00000020652) #16	Ndufs1 (ENSPEMG00000020453) #17	Eef1b2 (ENSPEMG00000016842) ##18	Cmklr2 (ENSPEMG00000000909) #19	Zdbf2 (ENSPEMG00000029531) #20	Adam23 (ENSPEMG00000020455) #22	Gm39653 (ENSPEMG00000029994) #23	Dytn (ENSPEMG00000020630) #24	Mdh1b (ENSPEMG00000012142) #25	Fastkd2 (ENSPEMG00000010593) #27	ENSPEMG00000029845	Klf7 (ENSPEMG00000028836) #29	Creb1 (ENSPEMG00000012416) #30	Mettl21a (ENSPEMG00000027520) #31	Ccnyl1 (ENSPEMG00000022762) ##34	Fzd5 (ENSPEMG00000026977) #35	Plekhm3 (ENSPEMG00000009141)	ENSPEMG00000029603	Crygd (ENSPEMG00000031321)	Crygc (ENSPEMG00000027882)	Crygb (ENSPEMG00000011613)
Murinae	ANCESTRAL SPECIES	9	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a	ENSGT00940000156190.h	ENSGT00390000004840
Mus	ANCESTRAL SPECIES	5	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00860000135862	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000153677.u.b.b.a.a.b	ENSGT00940000163272.a.a.j	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b
Mus_A	ANCESTRAL SPECIES	5	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00860000135862	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a.c ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000153677.u.b.b.a.a.b	ENSGT00940000163272.a.a.j	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b
Ryukyu mouse	MODERN SPECIES		Carf (MGP_CAROLIEiJ_G0014186)	Nbeal1 (MGP_CAROLIEiJ_G0014187)	Cyp20a1 (MGP_CAROLIEiJ_G0014188) #7	Abi2 (MGP_CAROLIEiJ_G0014189) #8	Raph1 (MGP_CAROLIEiJ_G0014190) #9	Cd28 (MGP_CAROLIEiJ_G0014191) #10	Ctla4 (MGP_CAROLIEiJ_G0014192) #11	Icos (MGP_CAROLIEiJ_G0014193) #12	Pard3b (MGP_CAROLIEiJ_G0014194) #14	Nrp2 (MGP_CAROLIEiJ_G0014195) #15	Ino80d (MGP_CAROLIEiJ_G0014196) #16	Ndufs1 (MGP_CAROLIEiJ_G0014197) #17	Eef1b2 (MGP_CAROLIEiJ_G0014198) ##18	Cmklr2 (MGP_CAROLIEiJ_G0014199) #19	Zdbf2 (MGP_CAROLIEiJ_G0014200) #20	Adam23 (MGP_CAROLIEiJ_G0014201) #22	Dytn (MGP_CAROLIEiJ_G0014202) #24	Mdh1b (MGP_CAROLIEiJ_G0014203) #25	Fastkd2 (MGP_CAROLIEiJ_G0014204) #27	MGP_CAROLIEiJ_G0014205	Klf7 (MGP_CAROLIEiJ_G0014206) #29	Creb1 (MGP_CAROLIEiJ_G0014207) #30	Mettl21a (MGP_CAROLIEiJ_G0014208) #31	Ccnyl1 (MGP_CAROLIEiJ_G0014209) ##34	Fzd5 (MGP_CAROLIEiJ_G0014210) #35	Plekhm3 (MGP_CAROLIEiJ_G0014211)	Akr1cl (MGP_CAROLIEiJ_G0014212)	Cryge (MGP_CAROLIEiJ_G0014213)	Crygd (MGP_CAROLIEiJ_G0014214)	Crygc (MGP_CAROLIEiJ_G0014215)	Crygb (MGP_CAROLIEiJ_G0014216)
Mus_B	ANCESTRAL SPECIES	7	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089.l #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00860000135862	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a.c ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000153677.u.b.b.a.a.b	ENSGT00940000163272.a.a.j	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b
Mus_C	ANCESTRAL SPECIES	1	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089.l #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00860000135862	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a.c ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000153677.u.b.b.a.a.b	ENSGT00940000163272.a.a.j	ENSGT00940000163272.a.b	ENSGT00940000159232.h.b
spretus	MODERN SPECIES		Carf (MGP_SPRETEiJ_G0014993)	Nbeal1 (MGP_SPRETEiJ_G0014994)	Cyp20a1 (MGP_SPRETEiJ_G0014995) #7	Abi2 (MGP_SPRETEiJ_G0014996) #8	Raph1 (MGP_SPRETEiJ_G0014997) #9	Cd28 (MGP_SPRETEiJ_G0014998) #10	Ctla4 (MGP_SPRETEiJ_G0014999) #11	Icos (MGP_SPRETEiJ_G0015000) #12	Pard3b (MGP_SPRETEiJ_G0015001) #14	Nrp2 (MGP_SPRETEiJ_G0015002) #15	Ino80d (MGP_SPRETEiJ_G0015003) #16	Ndufs1 (MGP_SPRETEiJ_G0015004) #17	Eef1b2 (MGP_SPRETEiJ_G0015005) ##18	Cmklr2 (MGP_SPRETEiJ_G0015006) #19	Zdbf2 (MGP_SPRETEiJ_G0015007) #20	Adam23 (MGP_SPRETEiJ_G0015008) #22	Dytn (MGP_SPRETEiJ_G0015009) #24	Mdh1b (MGP_SPRETEiJ_G0015010) #25	Fastkd2 (MGP_SPRETEiJ_G0015011) #27	MGP_SPRETEiJ_G0015012	Klf7 (MGP_SPRETEiJ_G0015013) #29	Creb1 (MGP_SPRETEiJ_G0015014) #30	Mettl21a (MGP_SPRETEiJ_G0015015) #31	Ccnyl1 (MGP_SPRETEiJ_G0015016) ##34	Fzd5 (MGP_SPRETEiJ_G0015017) #35	Plekhm3 (MGP_SPRETEiJ_G0015018)	Akr1cl (MGP_SPRETEiJ_G0015019)	Cryge (MGP_SPRETEiJ_G0015020)	Crygd (MGP_SPRETEiJ_G0015021)	Crygc (MGP_SPRETEiJ_G0015022)	Crygb (MGP_SPRETEiJ_G0015023)
Steppe mouse	MODERN SPECIES	44	ENSMSIG00000010702 #8	Raph1 (ENSMSIG00000010756) #9	Cd28 (ENSMSIG00000011356) #10	ENSMSIG00000011370	Ctla4 (ENSMSIG00000011388) #11	Icos (ENSMSIG00000011424) #12	Pard3b (ENSMSIG00000011469) #14	ENSMSIG00000011764	Nrp2 (ENSMSIG00000011775) #15	Ino80d (ENSMSIG00000012604) #16	Ndufs1 (ENSMSIG00000012674) #17	Eef1b2 (ENSMSIG00000012804) ##18	Cmklr2 (ENSMSIG00000012880) #19	Zdbf2 (ENSMSIG00000012889) #20	ENSMSIG00000012937	Adam23 (ENSMSIG00000012957) #22	ENSMSIG00000013264	Gm39653 (ENSMSIG00000013270) #23	Dytn (ENSMSIG00000013289) #24
Mouse	MODERN SPECIES		Carf (ENSMUSG00000026017)	Nbeal1 (ENSMUSG00000073664)	Cyp20a1 (ENSMUSG00000049439) #7	Abi2 (ENSMUSG00000026782) #8	Raph1 (ENSMUSG00000026014) #9	Cd28 (ENSMUSG00000026012) #10	Ctla4 (ENSMUSG00000026011) #11	Icos (ENSMUSG00000026009) #12	Pard3b (ENSMUSG00000052062) #14	Nrp2 (ENSMUSG00000025969) #15	Ino80d (ENSMUSG00000040865) #16	Ndufs1 (ENSMUSG00000025968) #17	Eef1b2 (ENSMUSG00000025967) ##18	Cmklr2 (ENSMUSG00000046856) #19	Zdbf2 (ENSMUSG00000027520) #20	Adam23 (ENSMUSG00000025964) #22	Gm39653 (ENSMUSG00000115378) #23	Dytn (ENSMUSG00000069085) #24	Mdh1b (ENSMUSG00000025963) #25	Fastkd2 (ENSMUSG00000025962) #27	Klf7 (ENSMUSG00000025959) #29	Creb1 (ENSMUSG00000025958) #30	Mettl21a (ENSMUSG00000025956) #31	Ccnyl1 (ENSMUSG00000070871) ##34	Fzd5 (ENSMUSG00000045005) #35	Plekhm3 (ENSMUSG00000051344)	Akr1cl (ENSMUSG00000025955)	Cryge (ENSMUSG00000070870)	Crygd (ENSMUSG00000067299)	Crygc (ENSMUSG00000025952)	Crygb (ENSMUSG00000073658)
Shrew mouse	MODERN SPECIES	18	Carf (MGP_PahariEiJ_G0027424)	MGP_PahariEiJ_G0027425	Cyp20a1 (MGP_PahariEiJ_G0027426) #7	Abi2 (MGP_PahariEiJ_G0027427) #8	Raph1 (MGP_PahariEiJ_G0027428) #9	Cd28 (MGP_PahariEiJ_G0027429) #10	Ctla4 (MGP_PahariEiJ_G0027430) #11	MGP_PahariEiJ_G0027431 #12	Pard3b (MGP_PahariEiJ_G0027432) #14	Nrp2 (MGP_PahariEiJ_G0027433) #15	Ino80d (MGP_PahariEiJ_G0027434) #16	MGP_PahariEiJ_G0027435 #17	Eef1b2 (MGP_PahariEiJ_G0027436) ##18	Cmklr2 (MGP_PahariEiJ_G0027437) #19	Zdbf2 (MGP_PahariEiJ_G0027438) #20	Adam23 (MGP_PahariEiJ_G0027439) #22	Dytn (MGP_PahariEiJ_G0027440) #24	Mdh1b (MGP_PahariEiJ_G0027441) #25	Fastkd2 (MGP_PahariEiJ_G0027442) #27	MGP_PahariEiJ_G0027443	Klf7 (MGP_PahariEiJ_G0027444) #29	Creb1 (MGP_PahariEiJ_G0027445) #30	Mettl21a (MGP_PahariEiJ_G0027446) #31	Ccnyl1 (MGP_PahariEiJ_G0027447) ##34	Fzd5 (MGP_PahariEiJ_G0027448) #35	Plekhm3 (MGP_PahariEiJ_G0027449)	Akr1cl (MGP_PahariEiJ_G0027450)	MGP_PahariEiJ_G0027451	Crygd (MGP_PahariEiJ_G0027452)	Crygc (MGP_PahariEiJ_G0027453)	Crygb (MGP_PahariEiJ_G0027454)
Rat	MODERN SPECIES	19	Nbeal1 (ENSRNOG00000021525)	Cyp20a1 (ENSRNOG00000017631) #7	Abi2 (ENSRNOG00000017707) #8	Raph1 (ENSRNOG00000014722) #9	Cd28 (ENSRNOG00000010283) #10	Ctla4 (ENSRNOG00000054129) #11	Icos (ENSRNOG00000046196) #12	Pard3b (ENSRNOG00000024345) #14	Nrp2 (ENSRNOG00000031232) #15	Rpl37-ps5 (ENSRNOG00000033803)	Ino80d (ENSRNOG00000024272) #16	Ndufs1 (ENSRNOG00000011849) #17	Eef1b2 (ENSRNOG00000024186) ##18	Cmklr2 (ENSRNOG00000045532) #19	Zdbf2 (ENSRNOG00000024114) #20	Adam23 (ENSRNOG00000012424) #22	Fam237a (ENSRNOG00000054699) #23	Dytn (ENSRNOG00000042181) #24	Mdh1b (ENSRNOG00000012891) #25	ENSRNOG00000063009	Fastkd2 (ENSRNOG00000023923) #27	ENSRNOG00000063607	Klf7 (ENSRNOG00000046242) #29	LOC103690545 (ENSRNOG00000064370)	Creb1 (ENSRNOG00000013412) #30	Mettl21a (ENSRNOG00000014212) #31	Ccnyl1 (ENSRNOG00000023807) ##34	Fzd5 (ENSRNOG00000014678) #35	Plekhm3 (ENSRNOG00000023760)	Cryga (ENSRNOG00000014790)	Crygd (ENSRNOG00000032219)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1322	Nbeal1 (ENSNGAG00000020072)	Cyp20a1 (ENSNGAG00000020232) #7	Abi2 (ENSNGAG00000012110) #8	ENSNGAG00000001490 #9	Cd28 (ENSNGAG00000015761) #10	Ctla4 (ENSNGAG00000019017) #11	ENSNGAG00000010975	Icos (ENSNGAG00000015325) #12	Pard3b (ENSNGAG00000019309) #14	Nrp2 (ENSNGAG00000014175) #15	Ino80d (ENSNGAG00000007370) #16	Ndufs1 (ENSNGAG00000016531) #17	Eef1b2 (ENSNGAG00000020801) ##18	Cmklr2 (ENSNGAG00000014936) #19	Zdbf2 (ENSNGAG00000010826) #20	Adam23 (ENSNGAG00000014933) #22	Mdh1b (ENSNGAG00000000139) #25	Fastkd2 (ENSNGAG00000001279) #27	Klf7 (ENSNGAG00000016561) #29	Creb1 (ENSNGAG00000018967) #30	Mettl21a (ENSNGAG00000013752) #31	ENSNGAG00000014167	Ccnyl1 (ENSNGAG00000004870) ##34	Fzd5 (ENSNGAG00000014954) #35	Plekhm3 (ENSNGAG00000007962)	Crygc (ENSNGAG00000017419)	D630023F18Rik (ENSNGAG00000013154)	Idh1 (ENSNGAG00000006870)	Pikfyve (ENSNGAG00000013615)	Pth2r (ENSNGAG00000017148)	ENSNGAG00000018453
Lesser Egyptian jerboa	MODERN SPECIES	52	Ica1l (ENSJJAG00000022732)	ENSJJAG00000000724	Carf (ENSJJAG00000014072)	Nbeal1 (ENSJJAG00000023210)	Cyp20a1 (ENSJJAG00000007155) #7	Abi2 (ENSJJAG00000006918) #8	ENSJJAG00000023840 #9	Cd28 (ENSJJAG00000001227) #10	Ctla4 (ENSJJAG00000013112) #11	Icos (ENSJJAG00000007794) #12	Pard3b (ENSJJAG00000015271) #14	Nrp2 (ENSJJAG00000016788) #15	Ino80d (ENSJJAG00000018074) #16	Ndufs1 (ENSJJAG00000013916) #17	Eef1b2 (ENSJJAG00000004915) ##18	Adam23 (ENSJJAG00000016078) #22	Dytn (ENSJJAG00000016868) #24	Mdh1b (ENSJJAG00000010713) #25	Fastkd2 (ENSJJAG00000000986) #27	ENSJJAG00000021742 #28	Klf7 (ENSJJAG00000011480) #29	Creb1 (ENSJJAG00000013846) #30	ENSJJAG00000023618 #31	Ccnyl1 (ENSJJAG00000024111) ##34	Fzd5 (ENSJJAG00000004014) #35	Plekhm3 (ENSJJAG00000012116)	ENSJJAG00000021625	Crygd (ENSJJAG00000014362)	Crygc (ENSJJAG00000023810)	ENSJJAG00000013715	Cryga (ENSJJAG00000018493)
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Suina	ANCESTRAL SPECIES	3	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Chacoan peccary	MODERN SPECIES	33															ENSCWAG00000000466	ADAM23 (ENSCWAG00000000308) #22
Pig	MODERN SPECIES	6	NBEAL1 (ENSSSCG00000016118)	CYP20A1 (ENSSSCG00000055761) #7	ABI2 (ENSSSCG00000034630) #8	ENSSSCG00000016119 #9	CD28 (ENSSSCG00000028561) #10	CTLA4 (ENSSSCG00000016122) #11	ICOS (ENSSSCG00000025042) #12	PARD3B (ENSSSCG00000016123) #14	ENSSSCG00000055400	NRP2 (ENSSSCG00000026383) #15	INO80D (ENSSSCG00000016125) #16	NDUFS1 (ENSSSCG00000016127) #17	EEF1B2 (ENSSSCG00000016128) ##18	CMKLR2 (ENSSSCG00000016129) #19	ZDBF2 (ENSSSCG00000016130) #20	ADAM23 (ENSSSCG00000016131) #22	FAM237A (ENSSSCG00000036691) #23	DYTN (ENSSSCG00000035158) #24	MDH1B (ENSSSCG00000016133) #25	FASTKD2 (ENSSSCG00000016134) #27	CPO (ENSSSCG00000016135) #28	KLF7 (ENSSSCG00000029998) #29	ENSSSCG00000042730	CREB1 (ENSSSCG00000034395) #30	METTL21A (ENSSSCG00000036466) #31	ENSSSCG00000024696 ##34	FZD5 (ENSSSCG00000016140) #35	PLEKHM3 (ENSSSCG00000016141)	ENSSSCG00000036186	CRYGD (ENSSSCG00000034967)	CRYGC (ENSSSCG00000039620)
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Camelidae	ANCESTRAL SPECIES	58	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Alpaca	MODERN SPECIES	3657																ADAM23 (ENSVPAG00000007489) #22	MDH1B (ENSVPAG00000007490) #25	FASTKD2 (ENSVPAG00000007491) #27	CPO (ENSVPAG00000007492) #28	KLF7 (ENSVPAG00000007495) #29	CREB1 (ENSVPAG00000007496) #30	METTL21A (ENSVPAG00000007498) #31	ENSVPAG00000007499 ##34
Arabian camel	MODERN SPECIES	31	WDR12 (ENSCDRG00005019221)	CARF (ENSCDRG00005019098)	NBEAL1 (ENSCDRG00005019031)	ABI2 (ENSCDRG00005018744) #8	ENSCDRG00005018577 #9	CD28 (ENSCDRG00005018484) #10	CTLA4 (ENSCDRG00005018448) #11	ICOS (ENSCDRG00005018420) #12	PARD3B (ENSCDRG00005018074) #14	NRP2 (ENSCDRG00005017938) #15	INO80D (ENSCDRG00005017847) #16	NDUFS1 (ENSCDRG00005017509) #17	EEF1B2 (ENSCDRG00005017418) ##18	CMKLR2 (ENSCDRG00005017405) #19	ZDBF2 (ENSCDRG00005017378) #20	ADAM23 (ENSCDRG00005016801) #22	FAM237A (ENSCDRG00005016730) #23	DYTN (ENSCDRG00005016665) #24	MDH1B (ENSCDRG00005016545) #25	FASTKD2 (ENSCDRG00005016506) #27	CPO (ENSCDRG00005016423) #28	KLF7 (ENSCDRG00005016375) #29	CREB1 (ENSCDRG00005016249) #30	METTL21A (ENSCDRG00005016143) #31	ENSCDRG00005016106	FZD5 (ENSCDRG00005016088) #35	PLEKHM3 (ENSCDRG00005016026)	ENSCDRG00005015995	CRYGD (ENSCDRG00005015948)	CRYGC (ENSCDRG00005015923)	CRYGB (ENSCDRG00005015889)
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00390000006670.d	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Blue whale	MODERN SPECIES	18	ENSBMSG00010000193 #10	ENSBMSG00010000215 #10	ENSBMSG00010000230	ENSBMSG00010000252	ICOS (ENSBMSG00010000278) #12	ENSBMSG00010000353	PARD3B (ENSBMSG00010000409) #14	NRP2 (ENSBMSG00010000535) #15	ENSBMSG00010001002	INO80D (ENSBMSG00010001021) #16	ENSBMSG00010001036	NDUFS1 (ENSBMSG00010001085) #17	EEF1B2 (ENSBMSG00010001199) ##18	CMKLR2 (ENSBMSG00010001229) #19	ZDBF2 (ENSBMSG00010001246) #20	ADAM23 (ENSBMSG00010001305) #22	FAM237A (ENSBMSG00010001408) #23	DYTN (ENSBMSG00010001424) #24	MDH1B (ENSBMSG00010001465) #25	FASTKD2 (ENSBMSG00010001509) #27	KLF7 (ENSBMSG00010001534) #29	CREB1 (ENSBMSG00010001606) #30	METTL21A (ENSBMSG00010001644) #31	ENSBMSG00010001661	ENSBMSG00010001666	IDH1 (ENSBMSG00010001674)	PIKFYVE (ENSBMSG00010001711)	PTH2R (ENSBMSG00010001780)	ENSBMSG00010001803	MAP2 (ENSBMSG00010001833)	UNC80 (ENSBMSG00010002392)
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00390000001958.n.a.g	ENSGT00390000004738.q.b	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Sperm whale	MODERN SPECIES	11	RAPH1 (ENSPCTG00005003938) #9	ENSPCTG00005005119 #10	CTLA4 (ENSPCTG00005005168) #11	ICOS (ENSPCTG00005005246) #12	ENSPCTG00005005318	ENSPCTG00005005328	PARD3B (ENSPCTG00005005375) #14	NRP2 (ENSPCTG00005005530) #15	ENSPCTG00005006370	INO80D (ENSPCTG00005006389) #16	ENSPCTG00005006412	NDUFS1 (ENSPCTG00005006448) #17	EEF1B2 (ENSPCTG00005006746) ##18	GPR1 (ENSPCTG00005006803) #19	ZDBF2 (ENSPCTG00005006840) #20	ADAM23 (ENSPCTG00005007031) #22	FAM237A (ENSPCTG00005007294) #23	DYTN (ENSPCTG00005007310) #24	MDH1B (ENSPCTG00005007378) #25	FASTKD2 (ENSPCTG00005004965) #27	KLF7 (ENSPCTG00005005002) #29	CREB1 (ENSPCTG00005005085) #30	METTL21A (ENSPCTG00005005122) #31	ENSPCTG00005005181	ENSPCTG00005005205	CCNYL1 (ENSPCTG00005005234) ##34	FZD5 (ENSPCTG00005005280) #35	PLEKHM3 (ENSPCTG00005005303)	ENSPCTG00005005346	CRYGD (ENSPCTG00005005372)	CRYGC (ENSPCTG00005005389)
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00390000006670.d	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Dolphin	MODERN SPECIES	3529																ADAM23 (ENSTTRG00000001388) #22
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00960000190610	ENSGT00440000037606.b #20	ENSGT00910000144184.r.a.a.a.a	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.w	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000156552 #9	ENSGT00950000183010.a.b.a.a.b ##36	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00960000190610	ENSGT00440000037606.b #20	ENSGT00910000144184.r.a.a.a.a	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00390000001958.n.a.g	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00390000006670.d	ENSGT00940000158720.c.b.w	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Narwhal	MODERN SPECIES	302	ENSMMNG00015006290 ##36	CD28 (ENSMMNG00015006278) #10	CTLA4 (ENSMMNG00015006260) #11	ICOS (ENSMMNG00015006232) #12	ENSMMNG00015006206	ENSMMNG00015006192	PARD3B (ENSMMNG00015005987) #14	NRP2 (ENSMMNG00015005855) #15	INO80D (ENSMMNG00015005802) #16	NDUFS1 (ENSMMNG00015005695) #17	EEF1B2 (ENSMMNG00015005617) ##18	CMKLR2 (ENSMMNG00015005602) #19	ENSMMNG00015005593	ZDBF2 (ENSMMNG00015005582) #20	ENSMMNG00015005570	ADAM23 (ENSMMNG00015005478) #22	FAM237A (ENSMMNG00015005439) #23	DYTN (ENSMMNG00015005422) #24	MDH1B (ENSMMNG00015005351) #25	FASTKD2 (ENSMMNG00015005336) #27	KLF7 (ENSMMNG00015005320) #29	CREB1 (ENSMMNG00015005293) #30	METTL21A (ENSMMNG00015005268) #31	ENSMMNG00015005252	ENSMMNG00015005240	ENSMMNG00015005216 ##34	FZD5 (ENSMMNG00015005204) #35	ENSMMNG00015005195	PLEKHM3 (ENSMMNG00015008741)	ENSMMNG00015008733	CRYGC (ENSMMNG00015008725)
Beluga whale	MODERN SPECIES	84	ENSDLEG00000008980 ##36	ENSDLEG00000009004 #10	CTLA4 (ENSDLEG00000009020) #11	ICOS (ENSDLEG00000009050) #12	ENSDLEG00000009073	ENSDLEG00000009090	ENSDLEG00000009108	PARD3B (ENSDLEG00000009127) #14	NRP2 (ENSDLEG00000009192) #15	INO80D (ENSDLEG00000009298) #16	NDUFS1 (ENSDLEG00000009340) #17	EEF1B2 (ENSDLEG00000009390) ##18	GPR1 (ENSDLEG00000009434) #19	ENSDLEG00000009440	ZDBF2 (ENSDLEG00000009453) #20	ADAM23 (ENSDLEG00000009497) #22	FAM237A (ENSDLEG00000009620) #23	DYTN (ENSDLEG00000009655) #24	MDH1B (ENSDLEG00000009773) #25	FASTKD2 (ENSDLEG00000009822) #27	KLF7 (ENSDLEG00000009871) #29	CREB1 (ENSDLEG00000009895) #30	METTL21A (ENSDLEG00000009925) #31	ENSDLEG00000009942	ENSDLEG00000009965	CCNYL1 (ENSDLEG00000009986) ##34	FZD5 (ENSDLEG00000010035) #35	PLEKHM3 (ENSDLEG00000010056)	ENSDLEG00000010082	ENSDLEG00000010093	CRYGD (ENSDLEG00000010113)
Vaquita	MODERN SPECIES	18	ABI2 (ENSPSNG00000011330) #8	RAPH1 (ENSPSNG00000009801) #9	ENSPSNG00000009309 #10	CTLA4 (ENSPSNG00000009249) #11	ICOS (ENSPSNG00000009099) #12	PARD3B (ENSPSNG00000008898) #14	NRP2 (ENSPSNG00000008707) #15	ENSPSNG00000008614	INO80D (ENSPSNG00000008590) #16	NDUFS1 (ENSPSNG00000008252) #17	EEF1B2 (ENSPSNG00000008153) ##18	CMKLR2 (ENSPSNG00000008130) #19	ENSPSNG00000008115	ZDBF2 (ENSPSNG00000008096) #20	ENSPSNG00000008082	ADAM23 (ENSPSNG00000007702) #22	FAM237A (ENSPSNG00000022142) #23	DYTN (ENSPSNG00000022128) #24	MDH1B (ENSPSNG00000022108) #25	FASTKD2 (ENSPSNG00000022088) #27	KLF7 (ENSPSNG00000022054) #29	CREB1 (ENSPSNG00000022021) #30	METTL21A (ENSPSNG00000022000) #31	ENSPSNG00000021984	ENSPSNG00000021964	ENSPSNG00000021936 ##34	ENSPSNG00000021913	ENSPSNG00000021899	PLEKHM3 (ENSPSNG00000021878)	ENSPSNG00000021854	CRYGD (ENSPSNG00000021845)
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Yarkand deer	MODERN SPECIES	31	RAPH1 (ENSCHYG00000002595) #9	CD28 (ENSCHYG00000002432) #10	CTLA4 (ENSCHYG00000002394) #11	ICOS (ENSCHYG00000002371) #12	ENSCHYG00000002349	ENSCHYG00000002345	PARD3B (ENSCHYG00000002220) #14	NRP2 (ENSCHYG00000002124) #15	ENSCHYG00000002093	INO80D (ENSCHYG00000002072) #16	NDUFS1 (ENSCHYG00000001983) #17	ENSCHYG00000001947 ##18	ENSCHYG00000001938	CMKLR2 (ENSCHYG00000001927) #19	ZDBF2 (ENSCHYG00000001897) #20	ADAM23 (ENSCHYG00000001792) #22	FAM237A (ENSCHYG00000001756) #23	DYTN (ENSCHYG00000001729) #24	ENSCHYG00000001715	MDH1B (ENSCHYG00000001680) #25	FASTKD2 (ENSCHYG00000001648) #27	CPO (ENSCHYG00000001618) #28	KLF7 (ENSCHYG00000001583) #29	CREB1 (ENSCHYG00000001543) #30	ENSCHYG00000001504 #31	FZD5 (ENSCHYG00000001477) #35	ENSCHYG00000001470	PLEKHM3 (ENSCHYG00000001407)	ENSCHYG00000001381	CRYGD (ENSCHYG00000001364)	CRYGC (ENSCHYG00000001360)
Percora_a	ANCESTRAL SPECIES	5	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Siberian musk deer	MODERN SPECIES	352						CD28 (ENSMMSG00000016228) #10	CTLA4 (ENSMMSG00000016291) #11	ICOS (ENSMMSG00000016369) #12	ENSMMSG00000016441	PARD3B (ENSMMSG00000016488) #14	NRP2 (ENSMMSG00000016704) #15	INO80D (ENSMMSG00000016888) #16	NDUFS1 (ENSMMSG00000016943) #17	ENSMMSG00000017130 ##18	ZDBF2 (ENSMMSG00000017183) #20	ADAM23 (ENSMMSG00000017291) #22	FAM237A (ENSMMSG00000017572) #23	DYTN (ENSMMSG00000017587) #24	MDH1B (ENSMMSG00000017649) #25	FASTKD2 (ENSMMSG00000017717) #27	CPO (ENSMMSG00000017798) #28	KLF7 (ENSMMSG00000017874) #29	ENSMMSG00000017910	CREB1 (ENSMMSG00000017935) #30	ENSMMSG00000017981 #31	ENSMMSG00000018078 ##34	FZD5 (ENSMMSG00000018190) #35	ENSMMSG00000018199	PLEKHM3 (ENSMMSG00000018216)	ENSMMSG00000018240	CRYGD (ENSMMSG00000018278)
Bovidae	ANCESTRAL SPECIES	8	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000153593.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Caprinae	ANCESTRAL SPECIES	5	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.b ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000153593.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Goat	MODERN SPECIES	11	ENSCHIG00000016764	NBEAL1 (ENSCHIG00000000921)	CYP20A1 (ENSCHIG00000022946) #7	ABI2 (ENSCHIG00000002652) #8	RAPH1 (ENSCHIG00000025930) #9	CD28 (ENSCHIG00000024564) #10	CTLA4 (ENSCHIG00000008042) #11	ICOS (ENSCHIG00000024943) #12	PARD3B (ENSCHIG00000007723) #14	NRP2 (ENSCHIG00000016092) #15	INO80D (ENSCHIG00000010718) #16	NDUFS1 (ENSCHIG00000014971) #17	EEF1B2 (ENSCHIG00000026794) ##18	CMKLR2 (ENSCHIG00000007661) #19	ZDBF2 (ENSCHIG00000022575) #20	ADAM23 (ENSCHIG00000011689) #22	FAM237A (ENSCHIG00000010865) #23	DYTN (ENSCHIG00000016602) #24	MDH1B (ENSCHIG00000022560) #25	FASTKD2 (ENSCHIG00000015121) #27	ENSCHIG00000003872	ENSCHIG00000026347	CPO (ENSCHIG00000020644) #28	KLF7 (ENSCHIG00000006619) #29	CREB1 (ENSCHIG00000027161) #30	METTL21A (ENSCHIG00000003332) #31	ENSCHIG00000011033 ##34	FZD5 (ENSCHIG00000007513) #35	PLEKHM3 (ENSCHIG00000008278)	ENSCHIG00000012358	ENSCHIG00000012148
Rambouillet Sheep	MODERN SPECIES	11	CYP20A1 (ENSOARG00020007538) #7	ABI2 (ENSOARG00020007596) #8	RAPH1 (ENSOARG00020007863) #9	ENSOARG00020008167	CD28 (ENSOARG00020008197) #10	CTLA4 (ENSOARG00020008302) #11	ICOS (ENSOARG00020008420) #12	PARD3B (ENSOARG00020008587) #14	NRP2 (ENSOARG00020013172) #15	ENSOARG00020013371 ##36	INO80D (ENSOARG00020013391) #16	NDUFS1 (ENSOARG00020013502) #17	ENSOARG00020014163 ##18	GPR1 (ENSOARG00020014248) #19	ZDBF2 (ENSOARG00020014286) #20	ADAM23 (ENSOARG00020014405) #22	FAM237A (ENSOARG00020014982) #23	DYTN (ENSOARG00020015031) #24	MDH1B (ENSOARG00020015160) #25	FASTKD2 (ENSOARG00020015403) #27	CPO (ENSOARG00020015466) #28	KLF7 (ENSOARG00020015555) #29	CREB1 (ENSOARG00020015664) #30	METTL21A (ENSOARG00020015859) #31	ENSOARG00020016023 ##34	FZD5 (ENSOARG00020016197) #35	PLEKHM3 (ENSOARG00020016241)	ENSOARG00020016435	CRYGD (ENSOARG00020016483)	CRYGC (ENSOARG00020016523)	CRYGB (ENSOARG00020016583)
Bovinae	ANCESTRAL SPECIES	5	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000153593.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
American bison	MODERN SPECIES	3330	CARF (ENSBBBG00000012044)	NBEAL1 (ENSBBBG00000011985)	CYP20A1 (ENSBBBG00000002236) #7	ABI2 (ENSBBBG00000011940) #8	ENSBBBG00000011830 #9	CD28 (ENSBBBG00000002157) #10	CTLA4 (ENSBBBG00000002155) #11	ICOS (ENSBBBG00000011656) #12	PARD3B (ENSBBBG00000011555) #14	NRP2 (ENSBBBG00000011269) #15	INO80D (ENSBBBG00000011164) #16	NDUFS1 (ENSBBBG00000011148) #17	ENSBBBG00000011052 ##18	CMKLR2 (ENSBBBG00000011031) #19	ZDBF2 (ENSBBBG00000011029) #20	ADAM23 (ENSBBBG00000011005) #22	FAM237A (ENSBBBG00000010954) #23	DYTN (ENSBBBG00000010949) #24	MDH1B (ENSBBBG00000010925) #25	FASTKD2 (ENSBBBG00000010905) #27	CPO (ENSBBBG00000010898) #28	ENSBBBG00000010890	KLF7 (ENSBBBG00000010885) #29	CREB1 (ENSBBBG00000010873) #30	METTL21A (ENSBBBG00000010854) #31	ENSBBBG00000010833 ##34	FZD5 (ENSBBBG00000010805) #35	PLEKHM3 (ENSBBBG00000010799)	ENSBBBG00000010792	ENSBBBG00000010781	CRYGD (ENSBBBG00000010778)
Bos	ANCESTRAL SPECIES	6	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT01100000263480.a.a.b.a.a.a.b.b.a.a.a.a.a.a	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00510000047245.w.a.a.b	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Hybrid Bos Indicus	MODERN SPECIES	11	CYP20A1 (ENSBIXG00005031589) #7	ABI2 (ENSBIXG00005031590) #8	RAPH1 (ENSBIXG00005031591) #9	CD28 (ENSBIXG00005031593) #10	CTLA4 (ENSBIXG00005031594) #11	ICOS (ENSBIXG00005031595) #12	PARD3B (ENSBIXG00005031598) #14	ENSBIXG00005031599	NRP2 (ENSBIXG00005031600) #15	INO80D (ENSBIXG00005031603) #16	ENSBIXG00005031604	NDUFS1 (ENSBIXG00005031605) #17	ENSBIXG00005031606 ##18	CMKLR2 (ENSBIXG00005031611) #19	ZDBF2 (ENSBIXG00005031612) #20	ADAM23 (ENSBIXG00005031613) #22	ENSBIXG00005031614	DYTN (ENSBIXG00005031615) #24	MDH1B (ENSBIXG00005031616) #25	FASTKD2 (ENSBIXG00005031617) #27	CPO (ENSBIXG00005031618) #28	KLF7 (ENSBIXG00005031620) #29	ENSBIXG00005031623	CREB1 (ENSBIXG00005031624) #30	FZD5 (ENSBIXG00005031625) #35	ENSBIXG00005031627 ##34	ENSBIXG00005001549	PLEKHM3 (ENSBIXG00005001556)	ENSBIXG00005005279	CRYGD (ENSBIXG00005005265)	CRYGC (ENSBIXG00005029223)
Cow	MODERN SPECIES	11	ENSBTAG00000051061	CTLA4 (ENSBTAG00000013170) #11	ICOS (ENSBTAG00000021596) #12	ENSBTAG00000040367	ENSBTAG00000051630	ENSBTAG00000049320	PARD3B (ENSBTAG00000010293) #14	ENSBTAG00000053833 #14	NRP2 (ENSBTAG00000011971) #15	INO80D (ENSBTAG00000014407) #16	ENSBTAG00000055132	NDUFS1 (ENSBTAG00000021976) #17	EEF1B2 (ENSBTAG00000021979) ##18	CMKLR2 (ENSBTAG00000017043) #19	ZDBF2 (ENSBTAG00000031166) #20	ADAM23 (ENSBTAG00000019694) #22	ENSBTAG00000055316	FAM237A (ENSBTAG00000050134) #23	DYTN (ENSBTAG00000046454) #24	MDH1B (ENSBTAG00000016192) #25	FASTKD2 (ENSBTAG00000016193) #27	CPO (ENSBTAG00000019190) #28	KLF7 (ENSBTAG00000044097) #29	CREB1 (ENSBTAG00000005474) #30	METTL21A (ENSBTAG00000052083) #31	CCNYL1 (ENSBTAG00000016297) ##34	FZD5 (ENSBTAG00000020957) #35	PLEKHM3 (ENSBTAG00000007830)	ENSBTAG00000049856	CRYGD (ENSBTAG00000015054)	CRYGC (ENSBTAG00000014783)
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.u.a.a.b.a ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00510000047245.w.a.a.b	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.s	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Wild yak	MODERN SPECIES	1700														ZDBF2 (ENSBMUG00000019818) #20	ENSBMUG00000019797	ADAM23 (ENSBMUG00000019771) #22	FAM237A (ENSBMUG00000019701) #23	DYTN (ENSBMUG00000019682) #24	MDH1B (ENSBMUG00000019631) #25	FASTKD2 (ENSBMUG00000019599) #27	CPO (ENSBMUG00000019582) #28
Domestic yak	MODERN SPECIES	11	ENSBGRG00000012733 #9	CD28 (ENSBGRG00000012545) #10	CTLA4 (ENSBGRG00000012384) #11	ENSBGRG00000012357	ICOS (ENSBGRG00000012246) #12	ENSBGRG00000012209	PARD3B (ENSBGRG00000011721) #14	NRP2 (ENSBGRG00000010098) #15	ENSBGRG00000010010	INO80D (ENSBGRG00000009960) #16	NDUFS1 (ENSBGRG00000009516) #17	ENSBGRG00000009445 ##18	CMKLR2 (ENSBGRG00000009401) #19	ZDBF2 (ENSBGRG00000009322) #20	ENSBGRG00000009270	ADAM23 (ENSBGRG00000008490) #22	FAM237A (ENSBGRG00000008425) #23	MDH1B (ENSBGRG00000008141) #25	FASTKD2 (ENSBGRG00000008051) #27	CPO (ENSBGRG00000007969) #28	ENSBGRG00000007943	KLF7 (ENSBGRG00000007842) #29	CREB1 (ENSBGRG00000007627) #30	METTL21A (ENSBGRG00000007457) #31	ENSBGRG00000007199 ##34	FZD5 (ENSBGRG00000007062) #35	ENSBGRG00000007042	PLEKHM3 (ENSBGRG00000006928)	ENSBGRG00000006903	CRYGD (ENSBGRG00000006881)	CRYGC (ENSBGRG00000006857)
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00940000153064.b.d	ENSGT01050000244818.s.a	ENSGT01090000260046	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Equus	ANCESTRAL SPECIES	18	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.g.b.b ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00950000186238	ENSGT00940000159743	ENSGT00940000159232.h.b	ENSGT00940000156190.g	ENSGT00940000159232.h.a	ENSGT00940000156190.h
Horse	MODERN SPECIES	9	CARF (ENSECAG00000017624)	NBEAL1 (ENSECAG00000020049)	CYP20A1 (ENSECAG00000010884) #7	ABI2 (ENSECAG00000018236) #8	ENSECAG00000022376 #9	CD28 (ENSECAG00000022853) #10	CTLA4 (ENSECAG00000003996) #11	ICOS (ENSECAG00000006253) #12	PARD3B (ENSECAG00000008768) #14	NRP2 (ENSECAG00000016824) #15	INO80D (ENSECAG00000015076) #16	NDUFS1 (ENSECAG00000015914) #17	EEF1B2 (ENSECAG00000016653) ##18	CMKLR2 (ENSECAG00000004408) #19	ZDBF2 (ENSECAG00000039959) #20	ADAM23 (ENSECAG00000018514) #22	FAM237A (ENSECAG00000050449) #23	DYTN (ENSECAG00000006820) #24	MDH1B (ENSECAG00000007491) #25	FASTKD2 (ENSECAG00000008822) #27	KLF7 (ENSECAG00000012215) #29	CREB1 (ENSECAG00000013667) #30	METTL21A (ENSECAG00000017536) #31	PLEKHM3 (ENSECAG00000008108)	FZD5 (ENSECAG00000007309) #35	ENSECAG00000039306	CRYGA (ENSECAG00000009588)	ENSECAG00000049516	CRYGB (ENSECAG00000010883)	C18H2orf80 (ENSECAG00000011588)	IDH1 (ENSECAG00000011931)
Donkey	MODERN SPECIES	24	CARF (ENSEASG00005002591)	NBEAL1 (ENSEASG00005002684)	CYP20A1 (ENSEASG00005002770) #7	ABI2 (ENSEASG00005002778) #8	ENSEASG00005002800 #9	CD28 (ENSEASG00005002842) #10	CTLA4 (ENSEASG00005002849) #11	ICOS (ENSEASG00005002854) #12	PARD3B (ENSEASG00005002870) #14	NRP2 (ENSEASG00005002875) #15	INO80D (ENSEASG00005002880) #16	NDUFS1 (ENSEASG00005002883) #17	EEF1B2 (ENSEASG00005026194) ##18	CMKLR2 (ENSEASG00005002916) #19	ZDBF2 (ENSEASG00005023969) #20	ADAM23 (ENSEASG00005002928) #22	FAM237A (ENSEASG00005002935) #23	DYTN (ENSEASG00005002938) #24	MDH1B (ENSEASG00005002948) #25	FASTKD2 (ENSEASG00005002958) #27	KLF7 (ENSEASG00005002973) #29	CREB1 (ENSEASG00005002983) #30	ENSEASG00005024979 #31	CCNYL1 (ENSEASG00005003014) #34	FZD5 (ENSEASG00005003041) #35	ENSEASG00005003042	PLEKHM3 (ENSEASG00005003046)	ENSEASG00005028742	CRYGB (ENSEASG00005028155)	ENSEASG00005033359	C2orf80 (ENSEASG00005003060)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Megabat	MODERN SPECIES	34																ADAM23 (ENSPVAG00000007311) #22
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.a ##34	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Greater horseshoe bat	MODERN SPECIES	26	CARF (ENSRFEG00010013855)	NBEAL1 (ENSRFEG00010013724)	CYP20A1 (ENSRFEG00010013600) #7	ABI2 (ENSRFEG00010013372) #8	RAPH1 (ENSRFEG00010013239) #9	CD28 (ENSRFEG00010013138) #10	ENSRFEG00010013108 #11	ICOS (ENSRFEG00010013045) #12	PARD3B (ENSRFEG00010012777) #14	NRP2 (ENSRFEG00010012560) #15	INO80D (ENSRFEG00010012508) #16	NDUFS1 (ENSRFEG00010011973) #17	EEF1B2 (ENSRFEG00010011873) ##18	CMKLR2 (ENSRFEG00010011856) #19	ENSRFEG00010011751 #20	ADAM23 (ENSRFEG00010010998) #22	FAM237A (ENSRFEG00010010918) #23	DYTN (ENSRFEG00010010740) #24	MDH1B (ENSRFEG00010010537) #25	FASTKD2 (ENSRFEG00010010475) #27	CPO (ENSRFEG00010010427) #28	KLF7 (ENSRFEG00010010310) #29	CREB1 (ENSRFEG00010020193) #30	ENSRFEG00010020167	METTL21A (ENSRFEG00010020119) #31	CCNYL1 (ENSRFEG00010020079) #34	FZD5 (ENSRFEG00010020064) #35	PLEKHM3 (ENSRFEG00010020009)	CRYGC (ENSRFEG00010019976)	CRYGB (ENSRFEG00010019933)	C2orf80 (ENSRFEG00010019768)
Microbat	MODERN SPECIES	940	CTLA4 (ENSMLUG00000009619) #11	ICOS (ENSMLUG00000009627) #12	ENSMLUG00000024002	ENSMLUG00000025717 #14	ENSMLUG00000013841 #14	ENSMLUG00000026514	ENSMLUG00000022709 #14	ENSMLUG00000028553 #14	NRP2 (ENSMLUG00000013862) #15	INO80D (ENSMLUG00000007714) #16	NDUFS1 (ENSMLUG00000016594) #17	ENSMLUG00000016602 ##18	CMKLR2 (ENSMLUG00000016607) #19	ENSMLUG00000023597	ZDBF2 (ENSMLUG00000014265) #20	ADAM23 (ENSMLUG00000009364) #22	FAM237A (ENSMLUG00000030140) #23	DYTN (ENSMLUG00000028179) #24	MDH1B (ENSMLUG00000009390) #25	FASTKD2 (ENSMLUG00000009411) #27	CPO (ENSMLUG00000009428) #28	KLF7 (ENSMLUG00000009436) #29	CREB1 (ENSMLUG00000016119) #30	METTL21A (ENSMLUG00000015747) #31	ENSMLUG00000016122 ##34	PLEKHM3 (ENSMLUG00000011905)	ENSMLUG00000028817	CRYGC (ENSMLUG00000015767)	C2orf80 (ENSMLUG00000025398)	ENSMLUG00000000891	PIKFYVE (ENSMLUG00000000897)
Carnivora	ANCESTRAL SPECIES	17	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00940000157820.a.a	ENSGT00530000063873.A #10	ENSGT01090000260046	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00940000157820.a.a	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.o ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.ab	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Cat	MODERN SPECIES	239	ENSFCAG00000048141	CYP20A1 (ENSFCAG00000022927) #7	ABI2 (ENSFCAG00000012982) #8	RAPH1 (ENSFCAG00000019050) #9	ENSFCAG00000034107	CD28 (ENSFCAG00000014271) #10	CTLA4 (ENSFCAG00000014272) #11	ICOS (ENSFCAG00000038001) #12	PARD3B (ENSFCAG00000025870) #14	NRP2 (ENSFCAG00000000423) #15	INO80D (ENSFCAG00000022035) #16	NDUFS1 (ENSFCAG00000023344) #17	EEF1B2 (ENSFCAG00000010239) ##18	CMKLR2 (ENSFCAG00000028762) #19	ZDBF2 (ENSFCAG00000041779) #20	ADAM23 (ENSFCAG00000018551) #22	DYTN (ENSFCAG00000024422) #24	MDH1B (ENSFCAG00000015372) #25	FASTKD2 (ENSFCAG00000015373) #27	CPO (ENSFCAG00000002513) #28	KLF7 (ENSFCAG00000002514) #29	CREB1 (ENSFCAG00000008220) #30	METTL21A (ENSFCAG00000035900) #31	CCNYL1 (ENSFCAG00000028003) ##34	ENSFCAG00000039577	FZD5 (ENSFCAG00000037566) #35	PLEKHM3 (ENSFCAG00000002716)	ENSFCAG00000046445	CRYGD (ENSFCAG00000042141)	CRYGC (ENSFCAG00000040128)	CRYGB (ENSFCAG00000003972)
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00520000059926.a.b	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.o ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.ab	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00520000059926.a.b	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.o ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.ab	ENSGT00940000158720.c.b.`b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
leopard	MODERN SPECIES	12		NBEAL1 (ENSPPRG00000024650)	CYP20A1 (ENSPPRG00000024582) #7	ABI2 (ENSPPRG00000024330) #8	ENSPPRG00000023758 #9	CD28 (ENSPPRG00000023378) #10	CTLA4 (ENSPPRG00000023337) #11	ICOS (ENSPPRG00000023149) #12	ENSPPRG00000020852	PARD3B (ENSPPRG00000001193) #14	NRP2 (ENSPPRG00000001684) #15	INO80D (ENSPPRG00000001843) #16	NDUFS1 (ENSPPRG00000003837) #17	ENSPPRG00000004175 ##18	CMKLR2 (ENSPPRG00000020893) #19	ADAM23 (ENSPPRG00000004864) #22	FAM237A (ENSPPRG00000005451) #23	DYTN (ENSPPRG00000005491) #24	MDH1B (ENSPPRG00000005932) #25	FASTKD2 (ENSPPRG00000006075) #27	CPO (ENSPPRG00000006106) #28	KLF7 (ENSPPRG00000006377) #29	CREB1 (ENSPPRG00000006712) #30	METTL21A (ENSPPRG00000006796) #31	ENSPPRG00000007043 ##34	PLEKHM3 (ENSPPRG00000007268)	ENSPPRG00000007573	CRYGD (ENSPPRG00000007631)	CRYGC (ENSPPRG00000007729)	ENSPPRG00000007792	CRYGA (ENSPPRG00000007869)
lion	MODERN SPECIES	8	ABI2 (ENSPLOG00000010377) #8	ENSPLOG00000010151 #9	CD28 (ENSPLOG00000010049) #10	CTLA4 (ENSPLOG00000010005) #11	ICOS (ENSPLOG00000009959) #12	ENSPLOG00000009936	PARD3B (ENSPLOG00000008780) #14	NRP2 (ENSPLOG00000008415) #15	INO80D (ENSPLOG00000008354) #16	NDUFS1 (ENSPLOG00000008138) #17	ENSPLOG00000008015	ENSPLOG00000007981 ##18	CMKLR2 (ENSPLOG00000007963) #19	ZDBF2 (ENSPLOG00000007898) #20	ENSPLOG00000007877	ADAM23 (ENSPLOG00000007574) #22	FAM237A (ENSPLOG00000007523) #23	DYTN (ENSPLOG00000007459) #24	MDH1B (ENSPLOG00000007375) #25	FASTKD2 (ENSPLOG00000007345) #27	CPO (ENSPLOG00000007242) #28	KLF7 (ENSPLOG00000007130) #29	CREB1 (ENSPLOG00000007090) #30	METTL21A (ENSPLOG00000007061) #31	ENSPLOG00000006998 ##34	FZD5 (ENSPLOG00000006965) #35	PLEKHM3 (ENSPLOG00000006915)	ENSPLOG00000006884	ENSPLOG00000006864	CRYGC (ENSPLOG00000006841)	CRYGB (ENSPLOG00000006808)
Tiger	MODERN SPECIES	313	ENSPTIG00000008218 ##36	NBEAL1 (ENSPTIG00000012887)	CYP20A1 (ENSPTIG00000012850) #7	ABI2 (ENSPTIG00000012734) #8	ENSPTIG00000012473 #9	CD28 (ENSPTIG00000012428) #10	CTLA4 (ENSPTIG00000012408) #11	ICOS (ENSPTIG00000012385) #12	ENSPTIG00000008211	PARD3B (ENSPTIG00000012297) #14	NRP2 (ENSPTIG00000012139) #15	INO80D (ENSPTIG00000012089) #16	NDUFS1 (ENSPTIG00000012021) #17	ENSPTIG00000011994 ##18	CMKLR2 (ENSPTIG00000008203) #19	ADAM23 (ENSPTIG00000011931) #22	FAM237A (ENSPTIG00000011920) #23	DYTN (ENSPTIG00000011914) #24	MDH1B (ENSPTIG00000011902) #25	FASTKD2 (ENSPTIG00000011891) #27	CPO (ENSPTIG00000011884) #28	KLF7 (ENSPTIG00000011869) #29	CREB1 (ENSPTIG00000011848) #30	METTL21A (ENSPTIG00000011823) #31	ENSPTIG00000011797 ##34	PLEKHM3 (ENSPTIG00000011775)	CRYGD (ENSPTIG00000011767)	CRYGC (ENSPTIG00000011760)	CRYGB (ENSPTIG00000011753)	CRYGA (ENSPTIG00000011747)	C2orf80 (ENSPTIG00000011733)
Caniformia	ANCESTRAL SPECIES	14	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00940000157820.a.a	ENSGT00530000063873.A #10	ENSGT01090000260046	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT01090000260046.e.a.a.b	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.q ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Red fox	MODERN SPECIES	39																ADAM23 (ENSVVUG00000011988) #22	FAM237A (ENSVVUG00000011979) #23	DYTN (ENSVVUG00000011958) #24	MDH1B (ENSVVUG00000011942) #25	FASTKD2 (ENSVVUG00000011933) #27	CPO (ENSVVUG00000011923) #28	KLF7 (ENSVVUG00000011906) #29	CREB1 (ENSVVUG00000011892) #30	METTL21A (ENSVVUG00000011888) #31	ENSVVUG00000011880	CCNYL1 (ENSVVUG00000011860) ##34	FZD5 (ENSVVUG00000011856) #35	PLEKHM3 (ENSVVUG00000011844)	CRYGD (ENSVVUG00000011838)	CRYGC (ENSVVUG00000011828)	ENSVVUG00000011820
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00940000154694.l.b.b.a.a.b	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h.q ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.ib	ENSGT00940000158720.c.b.hb	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b
Dingo	MODERN SPECIES	398	CYP20A1 (ENSCAFG00020001812) #7	ENSCAFG00020001801	ENSCAFG00020001784	ABI2 (ENSCAFG00020001752) #8	RAPH1 (ENSCAFG00020001630) #9	CD28 (ENSCAFG00020001531) #10	CTLA4 (ENSCAFG00020001506) #11	ICOS (ENSCAFG00020001489) #12	PARD3B (ENSCAFG00020001089) #14	NRP2 (ENSCAFG00020000746) #15	INO80D (ENSCAFG00020000661) #16	NDUFS1 (ENSCAFG00020000642) #17	EEF1B2 (ENSCAFG00020000617) ##18	CMKLR2 (ENSCAFG00020000614) #19	ZDBF2 (ENSCAFG00020000545) #20	ADAM23 (ENSCAFG00020000240) #22	FAM237A (ENSCAFG00020000156) #23	DYTN (ENSCAFG00020027434) #24	MDH1B (ENSCAFG00020027429) #25	FASTKD2 (ENSCAFG00020027426) #27	CPO (ENSCAFG00020027425) #28	KLF7 (ENSCAFG00020027423) #29	CREB1 (ENSCAFG00020027420) #30	METTL21A (ENSCAFG00020027418) #31	ENSCAFG00020027415 ##34	FZD5 (ENSCAFG00020027413) #35	PLEKHM3 (ENSCAFG00020027411)	ENSCAFG00020027409	CRYGD (ENSCAFG00020027405)	CRYGC (ENSCAFG00020027402)	ENSCAFG00020027399
Dog	MODERN SPECIES	30	ABI2 (ENSCAFG00845016661) #8	ENSCAFG00845016782	ENSCAFG00845016818	RAPH1 (ENSCAFG00845017225) #9	ENSCAFG00845017896	CD28 (ENSCAFG00845018097) #10	CTLA4 (ENSCAFG00845018252) #11	ICOS (ENSCAFG00845018403) #12	PARD3B (ENSCAFG00845018916) #14	NRP2 (ENSCAFG00845019968) #15	INO80D (ENSCAFG00845020375) #16	NDUFS1 (ENSCAFG00845020511) #17	EEF1B2 (ENSCAFG00845020822) ##18	GPR1 (ENSCAFG00845020895) #19	ZDBF2 (ENSCAFG00845020911) #20	ADAM23 (ENSCAFG00845021040) #22	FAM237A (ENSCAFG00845021430) #23	DYTN (ENSCAFG00845021457) #24	MDH1B (ENSCAFG00845021551) #25	FASTKD2 (ENSCAFG00845021685) #27	CPO (ENSCAFG00845021788) #28	KLF7 (ENSCAFG00845021900) #29	CREB1 (ENSCAFG00845022020) #30	METTL21A (ENSCAFG00845022171) #31	CCNYL1 (ENSCAFG00845022326) ##34	FZD5 (ENSCAFG00845022521) #35	PLEKHM3 (ENSCAFG00845022580)	ENSCAFG00845022685	CRYGD (ENSCAFG00845022754)	CRYGB (ENSCAFG00845023028)	CRYGA (ENSCAFG00845023182)
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00940000157820.a.a	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Mustelinae	ANCESTRAL SPECIES	44	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000159232.h.a
Ferret	MODERN SPECIES	265	ABI2 (ENSMPUG00000000402) #8	RAPH1 (ENSMPUG00000000405) #9	CD28 (ENSMPUG00000000418) #10	CTLA4 (ENSMPUG00000000422) #11	ICOS (ENSMPUG00000000425) #12	ENSMPUG00000000428	ENSMPUG00000000430 ##14	PARD3B (ENSMPUG00000000432) #14	NRP2 (ENSMPUG00000000435) #15	ENSMPUG00000000437	INO80D (ENSMPUG00000000439) #16	NDUFS1 (ENSMPUG00000000442) #17	EEF1B2 (ENSMPUG00000000444) ##18	CMKLR2 (ENSMPUG00000018909) #19	ZDBF2 (ENSMPUG00000000463) #20	ADAM23 (ENSMPUG00000000467) #22	ENSMPUG00000000471	MDH1B (ENSMPUG00000000473) #25	FASTKD2 (ENSMPUG00000000477) #27	CPO (ENSMPUG00000000481) #28	KLF7 (ENSMPUG00000000483) #29	CREB1 (ENSMPUG00000000485) #30	ENSMPUG00000018911	ENSMPUG00000000487 #31	ENSMPUG00000000489 ##34	FZD5 (ENSMPUG00000018918) #35	PLEKHM3 (ENSMPUG00000000492)	ENSMPUG00000000496	CRYGD (ENSMPUG00000000497)	CRYGC (ENSMPUG00000000499)	ENSMPUG00000000510
American mink	MODERN SPECIES	40	NBEAL1 (ENSNVIG00000007140)	CYP20A1 (ENSNVIG00000007093) #7	ABI2 (ENSNVIG00000006920) #8	RAPH1 (ENSNVIG00000006475) #9	ENSNVIG00000006462	CD28 (ENSNVIG00000006426) #10	CTLA4 (ENSNVIG00000006392) #11	ICOS (ENSNVIG00000006380) #12	PARD3B (ENSNVIG00000005889) #14	NRP2 (ENSNVIG00000005651) #15	INO80D (ENSNVIG00000005634) #16	NDUFS1 (ENSNVIG00000005404) #17	EEF1B2 (ENSNVIG00000005362) ##18	GPR1 (ENSNVIG00000005355) #19	ZDBF2 (ENSNVIG00000005326) #20	ADAM23 (ENSNVIG00000005209) #22	FAM237A (ENSNVIG00000005198) #23	DYTN (ENSNVIG00000005190) #24	MDH1B (ENSNVIG00000005145) #25	FASTKD2 (ENSNVIG00000005116) #27	CBPO (ENSNVIG00000005106) #28	KLF7 (ENSNVIG00000005091) #29	CREB1 (ENSNVIG00000005058) #30	METTL21A (ENSNVIG00000005027) #31	ENSNVIG00000005020	ENSNVIG00000004981 ##34	FZD5 (ENSNVIG00000004971) #35	PKHM3 (ENSNVIG00000004953)	ENSNVIG00000004919	CRYGD (ENSNVIG00000004910)	CRYGC (ENSNVIG00000004904)
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.bb	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Giant Panda	MODERN SPECIES	11	NBEAL1 (ENSAMEG00000013020)	ABI2 (ENSAMEG00000012960) #8	ENSAMEG00000002970 #9	ENSAMEG00000030945	ENSAMEG00000028551	CD28 (ENSAMEG00000002955) #10	CTLA4 (ENSAMEG00000002942) #11	ICOS (ENSAMEG00000002936) #12	PARD3B (ENSAMEG00000002930) #14	NRP2 (ENSAMEG00000003086) #15	INO80D (ENSAMEG00000003072) #16	NDUFS1 (ENSAMEG00000003030) #17	ENSAMEG00000003015 ##18	ZDBF2 (ENSAMEG00000029468) #20	CMKLR2 (ENSAMEG00000003011) #19	ADAM23 (ENSAMEG00000002950) #22	FAM237A (ENSAMEG00000029073) #23	DYTN (ENSAMEG00000025472) #24	MDH1B (ENSAMEG00000002932) #25	FASTKD2 (ENSAMEG00000002917) #27	CPO (ENSAMEG00000015096) #28	KLF7 (ENSAMEG00000015148) #29	CREB1 (ENSAMEG00000015152) #30	METTL21A (ENSAMEG00000015168) #31	ENSAMEG00000015175 ##34	FZD5 (ENSAMEG00000015206) #35	PLEKHM3 (ENSAMEG00000015216)	ENSAMEG00000023570	CRYGD (ENSAMEG00000031493)	CRYGC (ENSAMEG00000025725)	ENSAMEG00000023505
Ursus	ANCESTRAL SPECIES	4	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00910000148124	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b.bb	ENSGT00940000158720.c.a	ENSGT00940000159232.h.b	ENSGT00940000156190.g
Polar bear	MODERN SPECIES	142	NBEAL1 (ENSUMAG00000021925)	CYP20A1 (ENSUMAG00000022062) #7	ABI2 (ENSUMAG00000022146) #8	RAPH1 (ENSUMAG00000022157) #9	ENSUMAG00000022213	CD28 (ENSUMAG00000022222) #10	CTLA4 (ENSUMAG00000022223) #11	ICOS (ENSUMAG00000022228) #12	PARD3B (ENSUMAG00000022273) #14	NRP2 (ENSUMAG00000022446) #15	ENSUMAG00000022452	INO80D (ENSUMAG00000022462) #16	NDUFS1 (ENSUMAG00000022473) #17	EEF1B2 (ENSUMAG00000022481) ##18	ZDBF2 (ENSUMAG00000022505) #20	ADAM23 (ENSUMAG00000022533) #22	FAM237A (ENSUMAG00000022571) #23	DYTN (ENSUMAG00000022576) #24	MDH1B (ENSUMAG00000022585) #25	FASTKD2 (ENSUMAG00000022590) #27	CPO (ENSUMAG00000022606) #28	KLF7 (ENSUMAG00000022629) #29	METTL21A (ENSUMAG00000022649) #31	CREB1 (ENSUMAG00000022656) #30	ENSUMAG00000022665 ##34	PLEKHM3 (ENSUMAG00000022668)	ENSUMAG00000022672	CRYGD (ENSUMAG00000022673)	CRYGC (ENSUMAG00000022675)	ENSUMAG00000022680	CRYGA (ENSUMAG00000022681)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158781 #22
Common shrew	MODERN SPECIES	1133																ADAM23 (ENSSARG00000007745) #22
Hedgehog	MODERN SPECIES	1664																ENSEEUG00000002055 #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00390000004840	ENSGT00390000012547.b	ENSGT00940000156307.b
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000159232.h.a	ENSGT00390000004840	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a.h ##18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.b ##34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000159232.h.a	ENSGT00390000004840	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094
Elephant	MODERN SPECIES	301	CD28 (ENSLAFG00000017773) #10	CTLA4 (ENSLAFG00000006654) #11	ICOS (ENSLAFG00000006657) #12	ENSLAFG00000026263	ENSLAFG00000030813 #14	ENSLAFG00000007708 #14	ENSLAFG00000026835 #14	ENSLAFG00000025673 #14	ENSLAFG00000030808 #14	NRP2 (ENSLAFG00000016414) #15	INO80D (ENSLAFG00000015352) #16	NDUFS1 (ENSLAFG00000013782) #17	EEF1B2 (ENSLAFG00000011812) ##18	CMKLR2 (ENSLAFG00000009005) #19	ZDBF2 (ENSLAFG00000014253) #20	ADAM23 (ENSLAFG00000014452) #22	DYTN (ENSLAFG00000032161) #24	MDH1B (ENSLAFG00000015578) #25	FASTKD2 (ENSLAFG00000005198) #27	CPO (ENSLAFG00000009772) #28	KLF7 (ENSLAFG00000005822) #29	CREB1 (ENSLAFG00000013257) #30	METTL21A (ENSLAFG00000017103) #31	ENSLAFG00000021558 ##34	FZD5 (ENSLAFG00000017105) #35	PLEKHM3 (ENSLAFG00000030211)	ENSLAFG00000016869	ENSLAFG00000016874	C2orf80 (ENSLAFG00000016878)	IDH1 (ENSLAFG00000016882)	PIKFYVE (ENSLAFG00000016887)
Hyrax	MODERN SPECIES	1274																ADAM23 (ENSPCAG00000009186) #22
Tenrec	MODERN SPECIES	1603																ADAM23 (ENSETEG00000015378) #22
Xenarthra	ANCESTRAL SPECIES	283																ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.a.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.c.b	ENSGT00390000004840	ENSGT00940000156307.b
Armadillo	MODERN SPECIES	1524																ADAM23 (ENSDNOG00000045614) #22	DYTN (ENSDNOG00000038637) #24	MDH1B (ENSDNOG00000012637) #25	FASTKD2 (ENSDNOG00000012653) #27	CPO (ENSDNOG00000012917) #28	KLF7 (ENSDNOG00000035718) #29	CREB1 (ENSDNOG00000008373) #30	ENSDNOG00000044669 #31	CCNYL1 (ENSDNOG00000006969) #34	FZD5 (ENSDNOG00000049235) #35	PLEKHM3 (ENSDNOG00000004208)	ENSDNOG00000000659	ENSDNOG00000003591	C2orf80 (ENSDNOG00000034064)	PIKFYVE (ENSDNOG00000004447)
Sloth	MODERN SPECIES	1402																ADAM23 (ENSCHOG00000006581) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000155877	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.b	ENSGT00940000163272	ENSGT00940000158720.a	ENSGT00940000159232.f	ENSGT00940000159232.e
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270.c #15	ENSGT00940000155877	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.b	ENSGT00940000163272	ENSGT00940000158720.a	ENSGT00940000159232.f	ENSGT00940000159232.e
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270.c #15	ENSGT00940000155877	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.b	ENSGT00940000158720.a	ENSGT00940000159232.f	ENSGT00940000159232.e	ENSGT00940000156190.i
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT01030000234979.a	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270.c #15	ENSGT00940000155877	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000159743	ENSGT00940000158720.b	ENSGT00940000158720.a	ENSGT00940000159232.f	ENSGT00940000159232.e	ENSGT00940000156190.i
koala	MODERN SPECIES	132																ADAM23 (ENSPCIG00000018785) #22	FAM237A (ENSPCIG00000018781) #23	MDH1B (ENSPCIG00000018779) #25	FASTKD2 (ENSPCIG00000018777) #27	CPO (ENSPCIG00000018775) #28	KLF7 (ENSPCIG00000018773) #29	CREB1 (ENSPCIG00000032499) #30	METTL21A (ENSPCIG00000018395) #31	ENSPCIG00000012056 #34	FZD5 (ENSPCIG00000012060) #35	PLEKHM3 (ENSPCIG00000012063)	ENSPCIG00000035095	ENSPCIG00000031919	ENSPCIG00000036210	ENSPCIG00000034463	ENSPCIG00000012076
Wallaby	MODERN SPECIES	2374																ADAM23 (ENSMEUG00000002212) #22
Tasmanian devil	MODERN SPECIES	2	ABI2 (ENSSHAG00000008450) #8	ENSSHAG00000007679 #9	CD28 (ENSSHAG00000028743) #10	CTLA4 (ENSSHAG00000016177) #11	ENSSHAG00000015832 #12	ENSSHAG00000024535	PARD3B (ENSSHAG00000001616) #14	ENSSHAG00000024159 #15	ENSSHAG00000018322 #15	ENSSHAG00000026001	INO80D (ENSSHAG00000029318) #16	NDUFS1 (ENSSHAG00000017865) #17	EEF1B2 (ENSSHAG00000017853) #18	CMKLR2 (ENSSHAG00000021936) #19	ENSSHAG00000028209 #20	ADAM23 (ENSSHAG00000017245) #22	FAM237A (ENSSHAG00000017064) #23	MDH1B (ENSSHAG00000016820) #25	ENSSHAG00000016740 #27	ENSSHAG00000022521	CPO (ENSSHAG00000026232) #28	KLF7 (ENSSHAG00000015861) #29	CREB1 (ENSSHAG00000013905) #30	METTL21A (ENSSHAG00000013828) #31	ENSSHAG00000013219 #34	FZD5 (ENSSHAG00000027632) #35	PLEKHM3 (ENSSHAG00000011794)	ENSSHAG00000011379	CRYGD (ENSSHAG00000028541)	ENSSHAG00000011184	ENSSHAG00000026286
Opossum	MODERN SPECIES	6	CYP20A1 (ENSMODG00000016255) #7	ABI2 (ENSMODG00000016244) #8	ENSMODG00000016237 #9	CD28 (ENSMODG00000016234) #10	CTLA4 (ENSMODG00000016230) #11	ENSMODG00000025487 #12	ENSMODG00000024816	ENSMODG00000024817	PARD3B (ENSMODG00000016213) #14	NRP2 (ENSMODG00000016052) #15	ENSMODG00000016028	INO80D (ENSMODG00000016027) #16	NDUFS1 (ENSMODG00000016019) #17	EEF1B2 (ENSMODG00000016012) #18	GPR1 (ENSMODG00000046264) #19	ADAM23 (ENSMODG00000016005) #22	FAM237A (ENSMODG00000027693) #23	ENSMODG00000016001 #25	FASTKD2 (ENSMODG00000015997) #27	CPO (ENSMODG00000015987) #28	KLF7 (ENSMODG00000015982) #29	CREB1 (ENSMODG00000015970) #30	METTL21A (ENSMODG00000015959) #31	ENSMODG00000015954 #34	FZD5 (ENSMODG00000015949) #35	PLEKHM3 (ENSMODG00000027343)	ENSMODG00000024830	CRYGD (ENSMODG00000051256)	ENSMODG00000044652	ENSMODG00000049632	CRYGA (ENSMODG00000015939)
Platypus	MODERN SPECIES	18	ABI2 (ENSOANG00000001380) #8	ENSOANG00000006769 #9	ENSOANG00000048576	CD28 (ENSOANG00000040633) #10	CTLA4 (ENSOANG00000010895) #11	ENSOANG00000007435 #12	ENSOANG00000041151	PARD3B (ENSOANG00000014041) #14	ENSOANG00000044745 #14	NRP2 (ENSOANG00000012962) #15	ENSOANG00000038688	INO80D (ENSOANG00000012965) #16	NDUFS1 (ENSOANG00000002321) #17	EEF1B2 (ENSOANG00000012964) #18	CMKLR2 (ENSOANG00000012797) #19	ADAM23 (ENSOANG00000000660) #22	FAM237A (ENSOANG00000045785) #23	MDH1B (ENSOANG00000000659) #25	ENSOANG00000020472 #27	KLF7 (ENSOANG00000047076) #29	TIMM17A (ENSOANG00000043200)	LMOD1 (ENSOANG00000041996)	SHISA4 (ENSOANG00000009360)	IPO9 (ENSOANG00000009358)	ENSOANG00000009356	ENSOANG00000048097	NAV1 (ENSOANG00000009353)	ENSOANG00000009350	PHLDA3 (ENSOANG00000009349)	TNNI1 (ENSOANG00000040983)	ENSOANG00000049867
Sauria	ANCESTRAL SPECIES	32	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00940000159232	ENSGT00940000156190	ENSGT00390000004840
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00940000159232	ENSGT00940000156190	ENSGT00940000163322.a.b
Archosauria	ANCESTRAL SPECIES	6	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b	ENSGT00940000177631	ENSGT00940000156307.b
Aves	ANCESTRAL SPECIES	8	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a
Neognathae	ANCESTRAL SPECIES	6	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408.b #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.d #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Anatidae	ANCESTRAL SPECIES	10	ENSGT00940000163494.a.b.g.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408.b #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.d #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A
Pink-footed goose	MODERN SPECIES	120					ABI2 (ENSABRG00000018029) #8	RAPH1 (ENSABRG00000018013) #9	CD28 (ENSABRG00000018006) #10	CTLA4 (ENSABRG00000018000) #11	ICOS (ENSABRG00000017991) #12	PARD3B (ENSABRG00000017834) #14	NRP2 (ENSABRG00000017280) #15	INO80D (ENSABRG00000017222) #16	NDUFS1 (ENSABRG00000017107) #17	EEF1B2 (ENSABRG00000017085) #18	CMKLR2 (ENSABRG00000017081) #19	ADAM23 (ENSABRG00000016867) #22	FAM237A (ENSABRG00000016843) #23	MDH1B (ENSABRG00000016828) #25	FASTKD2 (ENSABRG00000016816) #27	CPO (ENSABRG00000016806) #28	KLF7 (ENSABRG00000016797) #29	CREB1 (ENSABRG00000016788) #30	ENSABRG00000016786 #31	ENSABRG00000016702 #34	ENSABRG00000016686	PLEKHM3 (ENSABRG00000016681)	CARF (ENSABRG00000016665)	WDR12 (ENSABRG00000016630)	FAM117B (ENSABRG00000016605)	BMPR2 (ENSABRG00000016558)	NOP58 (ENSABRG00000016523)
Duck	MODERN SPECIES	25	ENSAPLG00000027901	ENSAPLG00000025723	ENSAPLG00000025132	CYP20A1 (ENSAPLG00000015942) #7	ABI2 (ENSAPLG00000016216) #8	RAPH1 (ENSAPLG00000000860) #9	CD28 (ENSAPLG00000001723) #10	CTLA4 (ENSAPLG00000001966) #11	ICOS (ENSAPLG00000002410) #12	PARD3B (ENSAPLG00000002583) #14	NRP2 (ENSAPLG00000002735) #15	INO80D (ENSAPLG00000004131) #16	NDUFS1 (ENSAPLG00000004262) #17	EEF1B2 (ENSAPLG00000004841) #18	CMKLR2 (ENSAPLG00000001630) #19	ADAM23 (ENSAPLG00000005205) #22	FAM237A (ENSAPLG00000005882) #23	ENSAPLG00000005888	MDH1B (ENSAPLG00000006087) #25	FASTKD2 (ENSAPLG00000006177) #27	CPO (ENSAPLG00000006729) #28	KLF7 (ENSAPLG00000006752) #29	CREB1 (ENSAPLG00000006786) #30	METTL21A (ENSAPLG00000007133) #31	ENSAPLG00000007167 #34	ENSAPLG00000001632	PLEKHM3 (ENSAPLG00000007354)	CARF (ENSAPLG00000007561)	WDR12 (ENSAPLG00000007646)	FAM117B (ENSAPLG00000007980)	BMPR2 (ENSAPLG00000008092)
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408.b #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.d #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Japanese quail	MODERN SPECIES	25	ABI2 (ENSCJPG00005015864) #8	EEF1B2 (ENSCJPG00005015859) #18	NDUFS1 (ENSCJPG00005015858) #17	INO80D (ENSCJPG00005015857) #16	NRP2 (ENSCJPG00005015851) #15	ENSCJPG00005015848	ENSCJPG00005015847	ENSCJPG00005015846	PARD3B (ENSCJPG00005015409) #14	ICOS (ENSCJPG00005015381) #12	CTLA4 (ENSCJPG00005015379) #11	CD28 (ENSCJPG00005015378) #10	ENSCJPG00005015375	RAPH1 (ENSCJPG00005015370) #9	CMKLR2 (ENSCJPG00005015367) #19	ADAM23 (ENSCJPG00005015363) #22	MDH1B (ENSCJPG00005015360) #25	FASTKD2 (ENSCJPG00005015357) #27	CPO (ENSCJPG00005015355) #28	KLF7 (ENSCJPG00005015354) #29	CREB1 (ENSCJPG00005015351) #30	METTL21A (ENSCJPG00005015350) #31	ENSCJPG00005015349 #34	ENSCJPG00005015348	PLEKHM3 (ENSCJPG00005015346)	CARF (ENSCJPG00005015344)	WDR12 (ENSCJPG00005015343)	FAM117B (ENSCJPG00005015342)	BMPR2 (ENSCJPG00005015341)	NOP58 (ENSCJPG00005015334)	SUMO1 (ENSCJPG00005015331)
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408.b #30	ENSGT00940000157249 #31	ENSGT00940000154453.b.d #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Chicken	MODERN SPECIES	36	NBEAL1 (ENSGALG00010022149)	ENSGALG00010022124	CYP20A1 (ENSGALG00010022116) #7	ABI2 (ENSGALG00010022079) #8	RAPH1 (ENSGALG00010022033) #9	CD28 (ENSGALG00010021995) #10	CTLA4 (ENSGALG00010021983) #11	ICOS (ENSGALG00010021971) #12	PARD3B (ENSGALG00010021734) #14	NRP2 (ENSGALG00010026008) #15	INO80D (ENSGALG00010025994) #16	NDUFS1 (ENSGALG00010025984) #17	EEF1B2 (ENSGALG00010025974) #18	GPR1 (ENSGALG00010025960) #19	ENSGALG00010025836 #20	ADAM23 (ENSGALG00010026825) #22	FAM237A (ENSGALG00010025900) #23	DYTN (ENSGALG00010025894) #24	MDH1B (ENSGALG00010025874) #25	FASTKD2 (ENSGALG00010025869) #27	CPO (ENSGALG00010025855) #28	KLF7 (ENSGALG00010025822) #29	CREB1 (ENSGALG00010025351) #30	METTL21A (ENSGALG00010025340) #31	FZD5 (ENSGALG00010025333)	PLEKHM3 (ENSGALG00010025312)	CARF (ENSGALG00010025262)	WDR12 (ENSGALG00010025233)	FAM117B (ENSGALG00010025222)	BMPR2 (ENSGALG00010025207)	NOP58 (ENSGALG00010025157)
Turkey	MODERN SPECIES	27	ENSMGAG00000019768	NBEAL1 (ENSMGAG00000008870)	ENSMGAG00000019797	CYP20A1 (ENSMGAG00000008831) #7	ABI2 (ENSMGAG00000008821) #8	RAPH1 (ENSMGAG00000008794) #9	CD28 (ENSMGAG00000008783) #10	CTLA4 (ENSMGAG00000008759) #11	ICOS (ENSMGAG00000008751) #12	ENSMGAG00000021009 #15	PARD3B (ENSMGAG00000008728) #14	INO80D (ENSMGAG00000008621) #16	NDUFS1 (ENSMGAG00000008573) #17	EEF1B2 (ENSMGAG00000008548) #18	CMKLR2 (ENSMGAG00000016159) #19	ADAM23 (ENSMGAG00000008433) #22	FAM237A (ENSMGAG00000020531) #23	MDH1B (ENSMGAG00000008532) #25	FASTKD2 (ENSMGAG00000008516) #27	CPO (ENSMGAG00000008430) #28	KLF7 (ENSMGAG00000008396) #29	CREB1 (ENSMGAG00000008360) #30	METTL21A (ENSMGAG00000008350) #31	ENSMGAG00000008327 #34	ENSMGAG00000016153	PLEKHM3 (ENSMGAG00000008315)	CARF (ENSMGAG00000008291)	WDR12 (ENSMGAG00000008240)	FAM117B (ENSMGAG00000008139)	BMPR2 (ENSMGAG00000008156)	NOP58 (ENSMGAG00000008189)
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Golden eagle	MODERN SPECIES	22	ENSACCG00020002359	NBEAL1 (ENSACCG00020001867)	ENSACCG00020001270	CYP20A1 (ENSACCG00020001252) #7	ABI2 (ENSACCG00020001210) #8	RAPH1 (ENSACCG00020001057) #9	CD28 (ENSACCG00020000853) #10	CTLA4 (ENSACCG00020000823) #11	ICOS (ENSACCG00020000759) #12	PARD3B (ENSACCG00020000685) #14	NRP2 (ENSACCG00020000561) #15	INO80D (ENSACCG00020000521) #16	NDUFS1 (ENSACCG00020000486) #17	EEF1B2 (ENSACCG00020000452) #18	CMKLR2 (ENSACCG00020000445) #19	ADAM23 (ENSACCG00020000416) #22	FAM237A (ENSACCG00020000352) #23	DYTN (ENSACCG00020000333) #24	MDH1B (ENSACCG00020000316) #25	FASTKD2 (ENSACCG00020003396) #27	CPO (ENSACCG00020003371) #28	KLF7 (ENSACCG00020003351) #29	CREB1 (ENSACCG00020003332) #30	METTL21A (ENSACCG00020003321) #31	ENSACCG00020003303 #34	ENSACCG00020003288	PLEKHM3 (ENSACCG00020003252)	CARF (ENSACCG00020003224)	WDR12 (ENSACCG00020003209)	ENSACCG00020003192	ENSACCG00020003182
Kakapo	MODERN SPECIES	22	NBEAL1 (ENSSHBG00005003608)	ENSSHBG00005002906	CYP20A1 (ENSSHBG00005002889) #7	ABI2 (ENSSHBG00005002858) #8	RAPH1 (ENSSHBG00005002809) #9	CTLA4 (ENSSHBG00005002762) #11	ICOS (ENSSHBG00005002727) #12	PARD3B (ENSSHBG00005002706) #14	ENSSHBG00005002675 #14	NRP2 (ENSSHBG00005002621) #15	INO80D (ENSSHBG00005002582) #16	NDUFS1 (ENSSHBG00005002546) #17	EEF1B2 (ENSSHBG00005002514) #18	CMKLR2 (ENSSHBG00005002504) #19	ENSSHBG00005002492 #20	ADAM23 (ENSSHBG00005002434) #22	FAM237A (ENSSHBG00005002374) #23	MDH1B (ENSSHBG00005002354) #25	FASTKD2 (ENSSHBG00005002335) #27	CPO (ENSSHBG00005002311) #28	KLF7 (ENSSHBG00005002296) #29	CREB1 (ENSSHBG00005002287) #30	METTL21A (ENSSHBG00005002278) #31	ENSSHBG00005002269 #34	ENSSHBG00005002253	PLEKHM3 (ENSSHBG00005002232)	CARF (ENSSHBG00005002136)	WDR12 (ENSSHBG00005002114)	FAM117B (ENSSHBG00005002099)	BMPR2 (ENSSHBG00005002078)	NOP58 (ENSSHBG00005002029)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000155041.n	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000155041.n	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000162639 #35	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000155041.n	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A
Zebra finch	MODERN SPECIES	29	NBEAL1 (ENSTGUG00000029141)	ENSTGUG00000025723	CYP20A1 (ENSTGUG00000009709) #7	ABI2 (ENSTGUG00000009728) #8	RAPH1 (ENSTGUG00000009747) #9	CD28 (ENSTGUG00000016732) #10	CTLA4 (ENSTGUG00000009756) #11	ICOS (ENSTGUG00000009766) #12	ENSTGUG00000025370	PARD3B (ENSTGUG00000009770) #14	NRP2 (ENSTGUG00000009797) #15	INO80D (ENSTGUG00000009890) #16	NDUFS1 (ENSTGUG00000009895) #17	EEF1B2 (ENSTGUG00000009931) #18	CMKLR2 (ENSTGUG00000009954) #19	ADAM23 (ENSTGUG00000009963) #22	DYTN (ENSTGUG00000027316) #24	FAM237A (ENSTGUG00000009992) #23	MDH1B (ENSTGUG00000009999) #25	FASTKD2 (ENSTGUG00000010004) #27	CPO (ENSTGUG00000010012) #28	KLF7 (ENSTGUG00000010017) #29	CREB1 (ENSTGUG00000021110) #30	METTL21A (ENSTGUG00000010049) #31	ENSTGUG00000010055 #34	ENSTGUG00000010062	PLEKHM3 (ENSTGUG00000010067)	CARF (ENSTGUG00000010076)	WDR12 (ENSTGUG00000010086)	FAM117B (ENSTGUG00000010101)	BMPR2 (ENSTGUG00000010107)
Common canary	MODERN SPECIES	8	NBEAL1 (ENSSCAG00000001665)	ENSSCAG00000001706	CYP20A1 (ENSSCAG00000001710) #7	ABI2 (ENSSCAG00000001723) #8	RAPH1 (ENSSCAG00000001749) #9	CD28 (ENSSCAG00000001788) #10	CTLA4 (ENSSCAG00000001805) #11	ICOS (ENSSCAG00000001811) #12	PARD3B (ENSSCAG00000001874) #14	NRP2 (ENSSCAG00000002055) #15	INO80D (ENSSCAG00000002336) #16	NDUFS1 (ENSSCAG00000002344) #17	EEF1B2 (ENSSCAG00000002352) #18	ENSSCAG00000002359	CMKLR2 (ENSSCAG00000002370) #19	ADAM23 (ENSSCAG00000002375) #22	FAM237A (ENSSCAG00000002412) #23	MDH1B (ENSSCAG00000002419) #25	FASTKD2 (ENSSCAG00000002424) #27	CPO (ENSSCAG00000002428) #28	KLF7 (ENSSCAG00000002434) #29	CREB1 (ENSSCAG00000002440) #30	METTL21A (ENSSCAG00000002451) #31	ENSSCAG00000002462 #34	ENSSCAG00000002470	PLEKHM3 (ENSSCAG00000002482)	CARF (ENSSCAG00000002493)	WDR12 (ENSSCAG00000002510)	ENSSCAG00000002518	ENSSCAG00000002521	BMPR2 (ENSSCAG00000002534)
Medium ground finch	MODERN SPECIES	1	ENSGFOG00000006136	CYP20A1 (ENSGFOG00000006144) #7	ABI2 (ENSGFOG00000006158) #8	RAPH1 (ENSGFOG00000006191) #9	CD28 (ENSGFOG00000006204) #10	CTLA4 (ENSGFOG00000006210) #11	ICOS (ENSGFOG00000006216) #12	ENSGFOG00000006219	PARD3B (ENSGFOG00000006247) #14	NRP2 (ENSGFOG00000006567) #15	INO80D (ENSGFOG00000006596) #16	NDUFS1 (ENSGFOG00000006610) #17	EEF1B2 (ENSGFOG00000006636) #18	ENSGFOG00000006645	CMKLR2 (ENSGFOG00000006655) #19	ADAM23 (ENSGFOG00000006668) #22	FAM237A (ENSGFOG00000006747) #23	DYTN (ENSGFOG00000006753) #24	MDH1B (ENSGFOG00000006762) #25	FASTKD2 (ENSGFOG00000006769) #27	CPO (ENSGFOG00000006781) #28	KLF7 (ENSGFOG00000006789) #29	CREB1 (ENSGFOG00000006794) #30	METTL21A (ENSGFOG00000006799) #31	ENSGFOG00000006802 #34	FZD5 (ENSGFOG00000006809) #35	PLEKHM3 (ENSGFOG00000006814)	CARF (ENSGFOG00000006822)	WDR12 (ENSGFOG00000006866)	ENSGFOG00000006921	FAM117B (ENSGFOG00000006926)
Flycatcher	MODERN SPECIES	26	ENSFALG00000003658	ENSFALG00000003669	CYP20A1 (ENSFALG00000003678) #7	ABI2 (ENSFALG00000003705) #8	RAPH1 (ENSFALG00000003713) #9	CD28 (ENSFALG00000003718) #10	CTLA4 (ENSFALG00000003729) #11	ICOS (ENSFALG00000003743) #12	PARD3B (ENSFALG00000003749) #14	ENSFALG00000024358	NRP2 (ENSFALG00000003789) #15	INO80D (ENSFALG00000003838) #16	NDUFS1 (ENSFALG00000003849) #17	EEF1B2 (ENSFALG00000003879) #18	CMKLR2 (ENSFALG00000015287) #19	ADAM23 (ENSFALG00000003913) #22	FAM237A (ENSFALG00000003948) #23	DYTN (ENSFALG00000003952) #24	MDH1B (ENSFALG00000003957) #25	FASTKD2 (ENSFALG00000003964) #27	CPO (ENSFALG00000003980) #28	KLF7 (ENSFALG00000003989) #29	ENSFALG00000023985	CREB1 (ENSFALG00000003996) #30	METTL21A (ENSFALG00000004003) #31	ENSFALG00000027089 #34	PLEKHM3 (ENSFALG00000004020)	CARF (ENSFALG00000004023)	WDR12 (ENSFALG00000004032)	FAM117B (ENSFALG00000004036)	BMPR2 (ENSFALG00000004047)
Great tit	MODERN SPECIES	27	ENSPMJG00000018332	NBEAL1 (ENSPMJG00000018330)	ENSPMJG00000018329	CYP20A1 (ENSPMJG00000018328) #7	ABI2 (ENSPMJG00000018327) #8	RAPH1 (ENSPMJG00000018308) #9	CD28 (ENSPMJG00000018298) #10	CTLA4 (ENSPMJG00000018297) #11	ICOS (ENSPMJG00000018295) #12	PARD3B (ENSPMJG00000018290) #14	NRP2 (ENSPMJG00000018287) #15	INO80D (ENSPMJG00000018285) #16	NDUFS1 (ENSPMJG00000018281) #17	EEF1B2 (ENSPMJG00000018274) #18	CMKLR2 (ENSPMJG00000018273) #19	ADAM23 (ENSPMJG00000018267) #22	FAM237A (ENSPMJG00000018264) #23	DYTN (ENSPMJG00000018263) #24	MDH1B (ENSPMJG00000018262) #25	FASTKD2 (ENSPMJG00000018261) #27	CPO (ENSPMJG00000018259) #28	KLF7 (ENSPMJG00000018257) #29	CREB1 (ENSPMJG00000018256) #30	METTL21A (ENSPMJG00000018255) #31	ENSPMJG00000018252 #34	ENSPMJG00000018250	PLEKHM3 (ENSPMJG00000018247)	CARF (ENSPMJG00000018244)	WDR12 (ENSPMJG00000018243)	FAM117B (ENSPMJG00000018242)	BMPR2 (ENSPMJG00000018240)
African ostrich	MODERN SPECIES	602										ENSSCUG00000009062 #14	NRP2 (ENSSCUG00000009065) #15	INO80D (ENSSCUG00000009069) #16	NDUFS1 (ENSSCUG00000009074) #17	EEF1B2 (ENSSCUG00000009076) #18	CMKLR2 (ENSSCUG00000009084) #19	ADAM23 (ENSSCUG00000009094) #22	FAM237A (ENSSCUG00000009115) #23	DYTN (ENSSCUG00000009118) #24	MDH1B (ENSSCUG00000009125) #25	FASTKD2 (ENSSCUG00000009126) #27	CPO (ENSSCUG00000009130) #28	KLF7 (ENSSCUG00000009135) #29	CREB1 (ENSSCUG00000009137) #30	METTL21A (ENSSCUG00000009140) #31	ENSSCUG00000009142 #34	PLEKHM3 (ENSSCUG00000009146)	ENSSCUG00000009148	CARF (ENSSCUG00000009150)	WDR12 (ENSSCUG00000009160)	ENSSCUG00000009168
Australian saltwater crocodile	MODERN SPECIES	66	NBEAL1 (ENSCPRG00005001495)	ENSCPRG00005001521	CYP20A1 (ENSCPRG00005001526) #7	ABI2 (ENSCPRG00005001556) #8	RAPH1 (ENSCPRG00005001588) #9	CD28 (ENSCPRG00005001690) #10	CTLA4 (ENSCPRG00005001699) #11	ICOS (ENSCPRG00005001703) #12	ENSCPRG00005001708	PARD3B (ENSCPRG00005001781) #14	NRP2 (ENSCPRG00005001802) #15	INO80D (ENSCPRG00005001847) #16	NDUFS1 (ENSCPRG00005001849) #17	EEF1B2 (ENSCPRG00005001854) #18	CMKLR2 (ENSCPRG00005001863) #19	ADAM23 (ENSCPRG00005001887) #22	FAM237A (ENSCPRG00005001904) #23	DYTN (ENSCPRG00005001912) #24	MDH1B (ENSCPRG00005001923) #25	FASTKD2 (ENSCPRG00005001926) #27	CPO (ENSCPRG00005001934) #28	KLF7 (ENSCPRG00005001954) #29	CREB1 (ENSCPRG00005001961) #30	METTL21A (ENSCPRG00005001979) #31	ENSCPRG00005001990 #34	ENSCPRG00005002000	PLEKHM3 (ENSCPRG00005002005)	ENSCPRG00005002018	ENSCPRG00005002022	CRYGA (ENSCPRG00005002034)	ENSCPRG00005002039
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00940000159232	ENSGT00940000156190	ENSGT00390000004840
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00500000044939 #7	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00940000159232	ENSGT00940000156190	ENSGT00940000163322.a.b
Emydidae	ANCESTRAL SPECIES	4	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00940000159232	ENSGT00940000156190.c.a	ENSGT00390000004840
Three-toed box turtle	MODERN SPECIES	25	CARF (ENSTMTG00000011136)	ENSTMTG00000011258	NBEAL1 (ENSTMTG00000011535)	ENSTMTG00000000064	ABI2 (ENSTMTG00000000124) #8	RAPH1 (ENSTMTG00000000330) #9	CD28 (ENSTMTG00000000707) #10	CTLA4 (ENSTMTG00000000717) #11	ICOS (ENSTMTG00000000728) #12	PARD3B (ENSTMTG00000000749) #14	NRP2 (ENSTMTG00000000762) #15	INO80D (ENSTMTG00000000797) #16	NDUFS1 (ENSTMTG00000000828) #17	EEF1B2 (ENSTMTG00000000857) #18	CMKLR2 (ENSTMTG00000000886) #19	ADAM23 (ENSTMTG00000000910) #22	FAM237A (ENSTMTG00000000963) #23	DYTN (ENSTMTG00000000982) #24	MDH1B (ENSTMTG00000001002) #25	FASTKD2 (ENSTMTG00000001072) #27	CPO (ENSTMTG00000001098) #28	KLF7 (ENSTMTG00000001122) #29	CREB1 (ENSTMTG00000001136) #30	METTL21A (ENSTMTG00000001153) #31	ENSTMTG00000001162 #34	ENSTMTG00000001184	PLEKHM3 (ENSTMTG00000001191)	ENSTMTG00000001219	ENSTMTG00000001256	ENSTMTG00000001279	ENSTMTG00000001290
painted turtle	MODERN SPECIES	805						ENSCPBG00000015084	STK32A (ENSCPBG00000018970)	ENSCPBG00000019076	ENSCPBG00000019086 #14	NRP2 (ENSCPBG00000019110) #15	INO80D (ENSCPBG00000019181) #16	NDUFS1 (ENSCPBG00000019234) #17	EEF1B2 (ENSCPBG00000019285) #18	ENSCPBG00000019321	CMKLR2 (ENSCPBG00000019397) #19	ADAM23 (ENSCPBG00000019586) #22	FAM237A (ENSCPBG00000020040) #23	DYTN (ENSCPBG00000020053) #24	MDH1B (ENSCPBG00000020070) #25	FASTKD2 (ENSCPBG00000020108) #27	CPO (ENSCPBG00000020174) #28	KLF7 (ENSCPBG00000020188) #29	CREB1 (ENSCPBG00000020191) #30	METTL21A (ENSCPBG00000020196) #31	ENSCPBG00000020210 #34	ENSCPBG00000020270	PLEKHM3 (ENSCPBG00000020373)	ENSCPBG00000020472	ENSCPBG00000020500	CRYGA (ENSCPBG00000020534)	ENSCPBG00000020642
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000176171	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00960000187394	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00970000193449	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000161508 #28	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00940000163494.a.b.g.b	ENSGT00960000190368	ENSGT00940000156190	ENSGT00940000163322.a.b.e
Goode s thornscrub tortoise	MODERN SPECIES	2	CYP20A1 (ENSGEVG00005007271) #7	ENSGEVG00005007253	ABI2 (ENSGEVG00005007221) #8	RAPH1 (ENSGEVG00005007171) #9	CD28 (ENSGEVG00005007000) #10	CTLA4 (ENSGEVG00005006968) #11	ICOS (ENSGEVG00005006946) #12	PARD3B (ENSGEVG00005006583) #14	ENSGEVG00005006463	NRP2 (ENSGEVG00005006393) #15	INO80D (ENSGEVG00005006347) #16	NDUFS1 (ENSGEVG00005006314) #17	EEF1B2 (ENSGEVG00005006284) #18	CMKLR2 (ENSGEVG00005006269) #19	ENSGEVG00005006255 #20	ADAM23 (ENSGEVG00005006163) #22	FAM237A (ENSGEVG00005006142) #23	DYTN (ENSGEVG00005006111) #24	MDH1B (ENSGEVG00005006096) #25	FASTKD2 (ENSGEVG00005006068) #27	CPO (ENSGEVG00005005978) #28	KLF7 (ENSGEVG00005005958) #29	CREB1 (ENSGEVG00005005883) #30	METTL21A (ENSGEVG00005005862) #31	ENSGEVG00005005842 #34	ENSGEVG00005005818	PLEKHM3 (ENSGEVG00005005792)	ENSGEVG00005005756	ENSGEVG00005005746	CRYGA (ENSGEVG00005005709)	ENSGEVG00005005668
Abingdon island giant tortoise	MODERN SPECIES	2493																ADAM23 (ENSCABG00000021632) #22	FAM237A (ENSCABG00000021631) #23	DYTN (ENSCABG00000021630) #24	MDH1B (ENSCABG00000021626) #25	FASTKD2 (ENSCABG00000021583) #27	CPO (ENSCABG00000021572) #28	KLF7 (ENSCABG00000021571) #29	CREB1 (ENSCABG00000021569) #30	METTL21A (ENSCABG00000021568) #31	ENSCABG00000021553 #34	ENSCABG00000021547	PLEKHM3 (ENSCABG00000021546)	ENSCABG00000021540	ENSCABG00000021536	ENSCABG00000021534	ENSCABG00000021532
Chinese turtle	MODERN SPECIES	1524									ENSPSIG00000001658	INO80D (ENSPSIG00000015512) #16	ENSPSIG00000015732	EEF1B2 (ENSPSIG00000016994) #18	CMKLR2 (ENSPSIG00000001662) #19	ENSPSIG00000017017 #20	ENSPSIG00000001667 #20	ADAM23 (ENSPSIG00000017026) #22	DYTN (ENSPSIG00000017788) #24	MDH1B (ENSPSIG00000017813) #25	FASTKD2 (ENSPSIG00000017841) #27	CPO (ENSPSIG00000017869) #28	KLF7 (ENSPSIG00000005254) #29	CREB1 (ENSPSIG00000005343) #30	ENSPSIG00000005475	METTL21A (ENSPSIG00000005482) #31	ENSPSIG00000005491 #34	ENSPSIG00000005504	PLEKHM3 (ENSPSIG00000005544)	ENSPSIG00000005584	MRPS16 (ENSPSIG00000005589)
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00440000037606.b #20	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094	ENSGT00940000156597.b	ENSGT00640000091496
Episquamata	ANCESTRAL SPECIES		ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094	ENSGT00940000156597.b	ENSGT00640000091496
Laterata	ANCESTRAL SPECIES	42	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00390000015769.B #23	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000004840	ENSGT00940000154107.b	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094
Common wall lizard	MODERN SPECIES		CARF (ENSPMRG00000006921)	ENSPMRG00000006930	NBEAL1 (ENSPMRG00000007358)	CYP20A1 (ENSPMRG00000008728) #7	ABI2 (ENSPMRG00000008747) #8	RAPH1 (ENSPMRG00000008789) #9	CD28 (ENSPMRG00000008873) #10	CTLA4 (ENSPMRG00000008883) #11	PARD3B (ENSPMRG00000008900) #14	ENSPMRG00000008928	ENSPMRG00000008932	NRP2 (ENSPMRG00000008950) #15	INO80D (ENSPMRG00000009029) #16	EEF1B2 (ENSPMRG00000009046) #18	NDUFS1 (ENSPMRG00000009096) #17	ADAM23 (ENSPMRG00000009258) #22	FAM237A (ENSPMRG00000009266) #23	DYTN (ENSPMRG00000000114) #24	ENSPMRG00000000134 #25	ENSPMRG00000000143 #25	FASTKD2 (ENSPMRG00000000149) #27	KLF7 (ENSPMRG00000000188) #29	CREB1 (ENSPMRG00000000233) #30	METTL21A (ENSPMRG00000000269) #31	ENSPMRG00000000296	ENSPMRG00000000317 #34	ENSPMRG00000000354	PLEKHM3 (ENSPMRG00000000374)	C2orf80 (ENSPMRG00000000402)	IDH1 (ENSPMRG00000000420)	PIKFYVE (ENSPMRG00000000782)
Argentine black and white tegu	MODERN SPECIES	12	WDR12 (ENSSMRG00000020782)	ENSSMRG00000020781	NBEAL1 (ENSSMRG00000020780)	ENSSMRG00000020779	CYP20A1 (ENSSMRG00000020778) #7	ABI2 (ENSSMRG00000020777) #8	RAPH1 (ENSSMRG00000020776) #9	ENSSMRG00000020658	CTLA4 (ENSSMRG00000020651) #11	PARD3B (ENSSMRG00000020645) #14	NRP2 (ENSSMRG00000020640) #15	INO80D (ENSSMRG00000020639) #16	NDUFS1 (ENSSMRG00000020638) #17	EEF1B2 (ENSSMRG00000020633) #18	CMKLR2 (ENSSMRG00000020632) #19	ADAM23 (ENSSMRG00000020333) #22	FAM237A (ENSSMRG00000020332) #23	MDH1B (ENSSMRG00000020330) #25	FASTKD2 (ENSSMRG00000020328) #27	KLF7 (ENSSMRG00000020327) #29	CREB1 (ENSSMRG00000020325) #30	METTL21A (ENSSMRG00000020324) #31	ENSSMRG00000020322 #34	ENSSMRG00000020321	PLEKHM3 (ENSSMRG00000020318)	C2orf80 (ENSSMRG00000020315)	ENSSMRG00000020312	IDH1 (ENSSMRG00000020311)	PIKFYVE (ENSSMRG00000020308)	PTH2R (ENSSMRG00000020291)	ENSSMRG00000020288
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089 #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00940000162403 #24	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094	ENSGT00940000156597.b	ENSGT00640000091496	ENSGT00390000001447
Elapidae	ANCESTRAL SPECIES		ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939 #7	ENSGT00940000156089.g #8	ENSGT00940000156552 #9	ENSGT00530000063873.A #10	ENSGT00530000063873.B #11	ENSGT00390000000801 #12	ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b	ENSGT00940000156307.b	ENSGT00940000159094	ENSGT00940000156597.b	ENSGT00640000091496	ENSGT00390000001447
Elapidae_a	ANCESTRAL SPECIES	39										ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b	ENSGT00940000156307.b.g	ENSGT00940000159094	ENSGT00940000156597.b	ENSGT00640000091496	ENSGT00390000001447
Acanthophiinae	ANCESTRAL SPECIES	39										ENSGT00950000183214.a.b.a.b #14	ENSGT00940000155270 #15	ENSGT00940000157974 #16	ENSGT00940000153514.b #17	ENSGT00950000183014.f.a #18	ENSGT00940000160642 #19	ENSGT00940000158781 #22	ENSGT00530000063410.b #25	ENSGT01030000234607.A.b #27	ENSGT00940000155235 #29	ENSGT00940000155408 #30	ENSGT00940000157249 #31	ENSGT00940000154453.b #34	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00960000187202	ENSGT00390000012547.b	ENSGT00940000156307.b.g	ENSGT00940000159094	ENSGT00940000156597.b	ENSGT00640000091496	ENSGT00390000001447
Eastern brown snake	MODERN SPECIES	36								ENSPTXG00000008221	ENSPTXG00000008219	PARD3B (ENSPTXG00000008179) #14	NRP2 (ENSPTXG00000008167) #15	INO80D (ENSPTXG00000008163) #16	NDUFS1 (ENSPTXG00000008161) #17	EEF1B2 (ENSPTXG00000008156) #18	CMKLR2 (ENSPTXG00000008154) #19	ADAM23 (ENSPTXG00000008147) #22	MDH1B (ENSPTXG00000008146) #25	FASTKD2 (ENSPTXG00000008144) #27	KLF7 (ENSPTXG00000008140) #29	CREB1 (ENSPTXG00000008139) #30	METTL21A (ENSPTXG00000008138) #31	ENSPTXG00000008137 #34	ENSPTXG00000008136	PLEKHM3 (ENSPTXG00000008135)	IDH1 (ENSPTXG00000008132)	PIKFYVE (ENSPTXG00000007358)	PTH2R (ENSPTXG00000007351)	ENSPTXG00000007270	UNC80 (ENSPTXG00000007262)	ENSPTXG00000007256	ENSPTXG00000007255
Mainland tiger snake	MODERN SPECIES	50									ENSNSUG00000005042	PARD3B (ENSNSUG00000005020) #14	NRP2 (ENSNSUG00000005004) #15	INO80D (ENSNSUG00000004988) #16	NDUFS1 (ENSNSUG00000004982) #17	EEF1B2 (ENSNSUG00000004974) #18	CMKLR2 (ENSNSUG00000004973) #19	ADAM23 (ENSNSUG00000004968) #22	MDH1B (ENSNSUG00000004966) #25	FASTKD2 (ENSNSUG00000004850) #27	KLF7 (ENSNSUG00000004849) #29	CREB1 (ENSNSUG00000004838) #30	METTL21A (ENSNSUG00000004836) #31	ENSNSUG00000004835 #34	ENSNSUG00000004833	ENSNSUG00000004832	PLEKHM3 (ENSNSUG00000004824)	ENSNSUG00000004822	ENSNSUG00000004820	IDH1 (ENSNSUG00000004817)	PIKFYVE (ENSNSUG00000004809)	PTH2R (ENSNSUG00000004799)	ENSNSUG00000004751
Blue-lipped sea krait	MODERN SPECIES	1202																ADAM23 (ENSLLTG00000018110) #22
Indian cobra	MODERN SPECIES		NBEAL1 (ENSNNAG00000008400)	ENSNNAG00000008350	CYP20A1 (ENSNNAG00000008325) #7	ABI2 (ENSNNAG00000008284) #8	RAPH1 (ENSNNAG00000007996) #9	CD28 (ENSNNAG00000007953) #10	CTLA4 (ENSNNAG00000007939) #11	ICOS (ENSNNAG00000007918) #12	ENSNNAG00000007910	PARD3B (ENSNNAG00000007817) #14	NRP2 (ENSNNAG00000007682) #15	INO80D (ENSNNAG00000007613) #16	NDUFS1 (ENSNNAG00000007093) #17	EEF1B2 (ENSNNAG00000006992) #18	CMKLR2 (ENSNNAG00000006981) #19	ADAM23 (ENSNNAG00000006219) #22	MDH1B (ENSNNAG00000006119) #25	FASTKD2 (ENSNNAG00000006083) #27	KLF7 (ENSNNAG00000006050) #29	CREB1 (ENSNNAG00000006029) #30	METTL21A (ENSNNAG00000005999) #31	ENSNNAG00000005945 #34	ENSNNAG00000005932	PLEKHM3 (ENSNNAG00000005905)	ENSNNAG00000005842	ENSNNAG00000005828	IDH1 (ENSNNAG00000005790)	PIKFYVE (ENSNNAG00000005522)	PTH2R (ENSNNAG00000005410)	ENSNNAG00000005292	UNC80 (ENSNNAG00000005183)
Lizard	MODERN SPECIES	822	NBEAL1 (ENSACAG00000004721)	ENSACAG00000004658	CYP20A1 (ENSACAG00000004604) #7	ENSACAG00000045333	ABI2 (ENSACAG00000004539) #8	RAPH1 (ENSACAG00000004500) #9	CD28 (ENSACAG00000004486) #10	ENSACAG00000028063 #11	ENSACAG00000037252	PARD3B (ENSACAG00000004428) #14	NRP2 (ENSACAG00000004128) #15	INO80D (ENSACAG00000004095) #16	NDUFS1 (ENSACAG00000001471) #17	CMKLR2 (ENSACAG00000001415) #19	EEF1B2 (ENSACAG00000001423) #18	ADAM23 (ENSACAG00000009477) #22	ENSACAG00000028631 #24	MDH1B (ENSACAG00000009563) #25	FASTKD2 (ENSACAG00000009610) #27	KLF7 (ENSACAG00000009642) #29
tuatara	MODERN SPECIES	638											INO80D (ENSSPUG00000001624) #16	NDUFS1 (ENSSPUG00000001696) #17	EEF1B2 (ENSSPUG00000001704) #18	CMKLR2 (ENSSPUG00000001735) #19	ENSSPUG00000001749 #20	ADAM23 (ENSSPUG00000001758) #22	FAM237A (ENSSPUG00000001808) #23	MDH1B (ENSSPUG00000001821) #25	ENSSPUG00000001879 #27