Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00950000182926.b #22 Chordata ANCESTRAL SPECIES ENSGT00950000182926.b #22 Vertebrata ANCESTRAL SPECIES 193 ENSGT00950000182926.b #22 ENSGT00940000155032 ENSGT00390000015583 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 470 ENSGT00940000162611 ENSGT00940000154965.A ENSGT00940000166659 ENSGT00950000182926.b.d #22 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 Euteleostomi ANCESTRAL SPECIES 220 ENSGT00390000011684 ENSGT00940000161036.B ENSGT00940000157042 ENSGT00530000063711.b ENSGT00390000013726 ENSGT00390000000134.a ENSGT00940000160608 ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00390000013106 ENSGT00940000166659 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 Sarcopterygii ANCESTRAL SPECIES 50 ENSGT00940000160581 ENSGT01030000234543.A.b ENSGT00510000048167.b.b ENSGT00940000153322.B ENSGT00390000017284.a.a ENSGT00940000160184 ENSGT00940000160001 ENSGT00940000158095 ENSGT00940000166081 ENSGT00530000063371.C ENSGT00940000164705 ENSGT00940000161460 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000156168.C ENSGT00950000182950.A ENSGT00940000156931 ENSGT00530000064262 ENSGT00550000074939 ENSGT00940000153203.A.a ENSGT00940000158603 ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000158355 ENSGT00940000164577 ENSGT00530000068573 ENSGT00940000158544 ENSGT00950000183109.c.a.b Tetrapoda ANCESTRAL SPECIES 39 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Amniota ANCESTRAL SPECIES 10 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Mammalia ANCESTRAL SPECIES 14 ENSGT00940000161044 ENSGT00940000161927 ENSGT00940000154371.b ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT01000000220768 Theria ANCESTRAL SPECIES 21 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Glires ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Rodentia ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Guinea pig MODERN SPECIES 2 ENSCPOG00000037055 C1orf68 (ENSCPOG00000035893) ENSCPOG00000033053 ENSCPOG00000030235 ENSCPOG00000037041 ENSCPOG00000030043 ENSCPOG00000030563 ENSCPOG00000033173 ENSCPOG00000032596 ENSCPOG00000035955 ENSCPOG00000030264 ENSCPOG00000040656 ENSCPOG00000032513 ENSCPOG00000039783 ENSCPOG00000034456 ENSCPOG00000027424 #22 ENSCPOG00000021328 S100A11 (ENSCPOG00000009745) ENSCPOG00000033136 THEM4 (ENSCPOG00000000143) THEM5 (ENSCPOG00000001050) C2CD4D (ENSCPOG00000031360) RORC (ENSCPOG00000023600) LINGO4 (ENSCPOG00000003563) TDRKH (ENSCPOG00000003556) OAZ3 (ENSCPOG00000003550) MRPL9 (ENSCPOG00000021168) CELF3 (ENSCPOG00000003539) SNX27 (ENSCPOG00000007869) TUFT1 (ENSCPOG00000007866) CGN (ENSCPOG00000023121) Rodentia_B ANCESTRAL SPECIES 10 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Myomorpha ANCESTRAL SPECIES 1 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Muroidea ANCESTRAL SPECIES 1 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Upper Galilee mountains blind mole rat MODERN SPECIES 771 Ccnj (ENSNGAG00000023593) Zfp518a (ENSNGAG00000012849) Blnk (ENSNGAG00000017997) Dntt (ENSNGAG00000012677) Opalin (ENSNGAG00000018775) Tll2 (ENSNGAG00000018339) Tm9sf3 (ENSNGAG00000016022) Pik3ap1 (ENSNGAG00000007267) ENSNGAG00000023025 ENSNGAG00000014867 Lcor (ENSNGAG00000015021) Slit1 (ENSNGAG00000020175) Arhgap19 (ENSNGAG00000022828) ENSNGAG00000021467 Rrp12 (ENSNGAG00000024144) Pgam1 (ENSNGAG00000000765) #22 Exosc1 (ENSNGAG00000022033) Zdhhc16 (ENSNGAG00000023837) Mms19 (ENSNGAG00000023301) Ubtd1 (ENSNGAG00000023711) Ankrd2 (ENSNGAG00000023355) 4933411K16Rik (ENSNGAG00000023063) Hoga1 (ENSNGAG00000023929) Morn4 (ENSNGAG00000018405) Pi4k2a (ENSNGAG00000022396) Avpi1 (ENSNGAG00000020134) Marveld1 (ENSNGAG00000006309) Zfyve27 (ENSNGAG00000012854) Sfrp5 (ENSNGAG00000022581) Golga7b (ENSNGAG00000001605) Crtac1 (ENSNGAG00000021345) Muroidea_A ANCESTRAL SPECIES ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Murinae ANCESTRAL SPECIES ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b.a ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Mus ANCESTRAL SPECIES ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00860000135870 ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b.a ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Mus_A ANCESTRAL SPECIES 16 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00860000135870 ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b.a ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Mus_B ANCESTRAL SPECIES 16 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00860000135870 ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b.a ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Mouse MODERN SPECIES 10 Cc2d2b (ENSMUSG00000108929) Ccnj (ENSMUSG00000025010) Zfp518a (ENSMUSG00000049164) Blnk (ENSMUSG00000061132) Dntt (ENSMUSG00000025014) Opalin (ENSMUSG00000050121) Tll2 (ENSMUSG00000025013) Tm9sf3 (ENSMUSG00000025016) Pik3ap1 (ENSMUSG00000025017) Lcor (ENSMUSG00000025019) Slit1 (ENSMUSG00000025020) Arhgap19 (ENSMUSG00000025154) Frat1 (ENSMUSG00000067199) Frat2 (ENSMUSG00000047604) Rrp12 (ENSMUSG00000035049) Pgam1 (ENSMUSG00000011752) #22 Exosc1 (ENSMUSG00000034321) Zdhhc16 (ENSMUSG00000025157) Mms19 (ENSMUSG00000025159) Ubtd1 (ENSMUSG00000025171) Ankrd2 (ENSMUSG00000025172) Hoga1 (ENSMUSG00000025176) 4933411K16Rik (ENSMUSG00000090369) Morn4 (ENSMUSG00000049670) Pi4k2a (ENSMUSG00000025178) Avpi1 (ENSMUSG00000018821) Marveld1 (ENSMUSG00000044345) Zfyve27 (ENSMUSG00000018820) Sfrp5 (ENSMUSG00000018822) Golga7b (ENSMUSG00000042532) Crtac1 (ENSMUSG00000042401) Mus_C ANCESTRAL SPECIES 24 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00860000135870 ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b.a ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b spretus MODERN SPECIES 10 Ccnj (MGP_SPRETEiJ_G0023864) Zfp518a (MGP_SPRETEiJ_G0023865) Blnk (MGP_SPRETEiJ_G0023866) Dntt (MGP_SPRETEiJ_G0023867) Opalin (MGP_SPRETEiJ_G0023868) Tll2 (MGP_SPRETEiJ_G0023869) Tm9sf3 (MGP_SPRETEiJ_G0023870) Pik3ap1 (MGP_SPRETEiJ_G0023871) MGP_SPRETEiJ_G0023872 MGP_SPRETEiJ_G0023873 MGP_SPRETEiJ_G0023874 Slit1 (MGP_SPRETEiJ_G0023875) Arhgap19 (MGP_SPRETEiJ_G0023876) Frat2 (MGP_SPRETEiJ_G0023877) Rrp12 (MGP_SPRETEiJ_G0023878) Pgam1 (MGP_SPRETEiJ_G0023879) #22 Exosc1 (MGP_SPRETEiJ_G0023880) Zdhhc16 (MGP_SPRETEiJ_G0023881) Mms19 (MGP_SPRETEiJ_G0023882) Ubtd1 (MGP_SPRETEiJ_G0023883) Ankrd2 (MGP_SPRETEiJ_G0023884) Hoga1 (MGP_SPRETEiJ_G0023885) 4933411K16Rik (MGP_SPRETEiJ_G0023886) Morn4 (MGP_SPRETEiJ_G0023887) Pi4k2a (MGP_SPRETEiJ_G0023888) Avpi1 (MGP_SPRETEiJ_G0023889) Marveld1 (MGP_SPRETEiJ_G0023890) Zfyve27 (MGP_SPRETEiJ_G0023891) Sfrp5 (MGP_SPRETEiJ_G0023892) Golga7b (MGP_SPRETEiJ_G0023893) Crtac1 (MGP_SPRETEiJ_G0023894) Steppe mouse MODERN SPECIES 3102 Dntt (ENSMSIG00000014961) ENSMSIG00000015036 Tll2 (ENSMSIG00000015085) Tm9sf3 (ENSMSIG00000015141) Pik3ap1 (ENSMSIG00000015191) Lcor (ENSMSIG00000015282) ENSMSIG00000015301 Slit1 (ENSMSIG00000015311) Arhgap19 (ENSMSIG00000015456) Frat1 (ENSMSIG00000015552) Frat2 (ENSMSIG00000015557) Rrp12 (ENSMSIG00000015566) ENSMSIG00000015664 #22 Exosc1 (ENSMSIG00000015679) Zdhhc16 (ENSMSIG00000015766) Mms19 (ENSMSIG00000015819) Ubtd1 (ENSMSIG00000016084) Ankrd2 (ENSMSIG00000016098) Hoga1 (ENSMSIG00000016124) Morn4 (ENSMSIG00000016140) Pi4k2a (ENSMSIG00000016167) Avpi1 (ENSMSIG00000016198) Marveld1 (ENSMSIG00000016215) ENSMSIG00000016220 Zfyve27 (ENSMSIG00000016227) Sfrp5 (ENSMSIG00000016290) ENSMSIG00000016305 Crtac1 (ENSMSIG00000016325) Ryukyu mouse MODERN SPECIES 10 Ccnj (MGP_CAROLIEiJ_G0022943) Zfp518a (MGP_CAROLIEiJ_G0022944) Blnk (MGP_CAROLIEiJ_G0022945) Dntt (MGP_CAROLIEiJ_G0022946) Opalin (MGP_CAROLIEiJ_G0022947) Tll2 (MGP_CAROLIEiJ_G0022948) Tm9sf3 (MGP_CAROLIEiJ_G0022949) Pik3ap1 (MGP_CAROLIEiJ_G0022950) MGP_CAROLIEiJ_G0022951 MGP_CAROLIEiJ_G0022952 MGP_CAROLIEiJ_G0022953 Slit1 (MGP_CAROLIEiJ_G0022954) Arhgap19 (MGP_CAROLIEiJ_G0022955) Frat2 (MGP_CAROLIEiJ_G0022956) Rrp12 (MGP_CAROLIEiJ_G0022957) Pgam1 (MGP_CAROLIEiJ_G0022958) #22 Exosc1 (MGP_CAROLIEiJ_G0022959) Zdhhc16 (MGP_CAROLIEiJ_G0022960) Mms19 (MGP_CAROLIEiJ_G0022961) Ubtd1 (MGP_CAROLIEiJ_G0022962) Ankrd2 (MGP_CAROLIEiJ_G0022963) Hoga1 (MGP_CAROLIEiJ_G0022964) 4933411K16Rik (MGP_CAROLIEiJ_G0022965) Morn4 (MGP_CAROLIEiJ_G0022966) Pi4k2a (MGP_CAROLIEiJ_G0022967) Avpi1 (MGP_CAROLIEiJ_G0022968) Marveld1 (MGP_CAROLIEiJ_G0022969) Zfyve27 (MGP_CAROLIEiJ_G0022970) Sfrp5 (MGP_CAROLIEiJ_G0022971) Golga7b (MGP_CAROLIEiJ_G0022972) Crtac1 (MGP_CAROLIEiJ_G0022973) Shrew mouse MODERN SPECIES Ccnj (MGP_PahariEiJ_G0014433) Zfp518a (MGP_PahariEiJ_G0014434) Blnk (MGP_PahariEiJ_G0014435) Dntt (MGP_PahariEiJ_G0014436) Opalin (MGP_PahariEiJ_G0014437) Tll2 (MGP_PahariEiJ_G0014438) Tm9sf3 (MGP_PahariEiJ_G0014439) Pik3ap1 (MGP_PahariEiJ_G0014440) MGP_PahariEiJ_G0014441 MGP_PahariEiJ_G0014442 MGP_PahariEiJ_G0014443 Slit1 (MGP_PahariEiJ_G0014444) Arhgap19 (MGP_PahariEiJ_G0014445) Frat2 (MGP_PahariEiJ_G0014446) Rrp12 (MGP_PahariEiJ_G0014447) Pgam1 (MGP_PahariEiJ_G0014448) #22 Exosc1 (MGP_PahariEiJ_G0014449) Zdhhc16 (MGP_PahariEiJ_G0014450) Mms19 (MGP_PahariEiJ_G0014451) Ubtd1 (MGP_PahariEiJ_G0014452) Ankrd2 (MGP_PahariEiJ_G0014453) Hoga1 (MGP_PahariEiJ_G0014454) 4933411K16Rik (MGP_PahariEiJ_G0014455) Morn4 (MGP_PahariEiJ_G0014456) Pi4k2a (MGP_PahariEiJ_G0014457) Avpi1 (MGP_PahariEiJ_G0014458) Marveld1 (MGP_PahariEiJ_G0014459) Zfyve27 (MGP_PahariEiJ_G0014460) Sfrp5 (MGP_PahariEiJ_G0014461) Golga7b (MGP_PahariEiJ_G0014462) Crtac1 (MGP_PahariEiJ_G0014463) Rat DUPLICATION Rat MODERN SPECIES 11 LOC100362176 (ENSRNOG00000009803) Ift80 (ENSRNOG00000009808) Smc4 (ENSRNOG00000010274) Trim59 (ENSRNOG00000010515) Kpna4 (ENSRNOG00000010768) LOC120100841 (ENSRNOG00000063309) Arl14 (ENSRNOG00000049827) Ppm1l (ENSRNOG00000067239) B3galnt1 (ENSRNOG00000012019) AABR07011698.1 (ENSRNOG00000028120) RGD1563620 (ENSRNOG00000028052) Nmd3 (ENSRNOG00000009310) Otol1 (ENSRNOG00000021186) AABR07011744.1 (ENSRNOG00000061747) ENSRNOG00000063890 ENSRNOG00000066566 #22 Si (ENSRNOG00000031067) Slitrk3 (ENSRNOG00000009821) Bche (ENSRNOG00000009826) Zbbx (ENSRNOG00000009792) Serpini2 (ENSRNOG00000009903) Wdr49 (ENSRNOG00000024628) Pdcd10 (ENSRNOG00000010147) Serpini1 (ENSRNOG00000010248) LOC108350036 (ENSRNOG00000046421) Golim4 (ENSRNOG00000024213) Fstl5 (ENSRNOG00000047002) ENSRNOG00000063747 Hsc70-ps1 (ENSRNOG00000034093) LOC100363048 (ENSRNOG00000067916) ENSRNOG00000070442 Rat MODERN SPECIES Entpd1 (ENSRNOG00000014574) Cc2d2b (ENSRNOG00000070964) Zfp518a (ENSRNOG00000036592) Blnk (ENSRNOG00000013967) Dntt (ENSRNOG00000013615) Opalin (ENSRNOG00000022386) Tll2 (ENSRNOG00000013519) Tm9sf3 (ENSRNOG00000013443) Pik3ap1 (ENSRNOG00000013309) Lcor (ENSRNOG00000042679) Slit1 (ENSRNOG00000026065) Arhgap19 (ENSRNOG00000048166) Frat1 (ENSRNOG00000067076) Frat2 (ENSRNOG00000045543) Rrp12 (ENSRNOG00000048495) Pgam1 (ENSRNOG00000050585) #22 Exosc1 (ENSRNOG00000048708) Zdhhc16 (ENSRNOG00000046530) Mms19 (ENSRNOG00000046769) Ubtd1 (ENSRNOG00000013813) Ankrd2 (ENSRNOG00000013840) Hoga1 (ENSRNOG00000029501) MGC93861 (ENSRNOG00000069762) Morn4 (ENSRNOG00000027156) Pi4k2a (ENSRNOG00000014675) Avpi1 (ENSRNOG00000014828) Marveld1 (ENSRNOG00000042620) Zfyve27 (ENSRNOG00000014903) Sfrp5 (ENSRNOG00000014940) AABR07006871.1 (ENSRNOG00000053536) Golga7b (ENSRNOG00000015051) Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Chinese hamster chok1gshd MODERN SPECIES 263 Zfp518a (ENSCGRG00001009777) Blnk (ENSCGRG00001008533) Dntt (ENSCGRG00001003301) Opalin (ENSCGRG00001000224) Tll2 (ENSCGRG00001023733) ENSCGRG00001022183 Pik3ap1 (ENSCGRG00001021098) ENSCGRG00001020516 Lcor (ENSCGRG00001020097) Slit1 (ENSCGRG00001013710) ENSCGRG00001004479 Arhgap19 (ENSCGRG00001008072) ENSCGRG00001004340 Frat2 (ENSCGRG00001007661) Rrp12 (ENSCGRG00001004338) Pgam1 (ENSCGRG00001001591) #22 Exosc1 (ENSCGRG00001000335) Zdhhc16 (ENSCGRG00001024037) Mms19 (ENSCGRG00001022087) Ubtd1 (ENSCGRG00001020134) Ankrd2 (ENSCGRG00001011585) 4933411K16Rik (ENSCGRG00001010620) Hoga1 (ENSCGRG00001010186) Morn4 (ENSCGRG00001008672) Pi4k2a (ENSCGRG00001006184) Avpi1 (ENSCGRG00001003238) Marveld1 (ENSCGRG00001015304) Zfyve27 (ENSCGRG00001001467) Sfrp5 (ENSCGRG00001000510) Golga7b (ENSCGRG00001000198) Crtac1 (ENSCGRG00001023131) Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.d #22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Prairie vole MODERN SPECIES 48 ENSMOCG00000000250 #22 Northern American deer mouse MODERN SPECIES Cc2d2b (ENSPEMG00000020898) Ccnj (ENSPEMG00000030735) Zfp518a (ENSPEMG00000019344) Blnk (ENSPEMG00000019675) Dntt (ENSPEMG00000019606) Opalin (ENSPEMG00000031402) Tll2 (ENSPEMG00000018066) Tm9sf3 (ENSPEMG00000019600) Pik3ap1 (ENSPEMG00000019544) ENSPEMG00000005693 Lcor (ENSPEMG00000018115) Slit1 (ENSPEMG00000002625) Arhgap19 (ENSPEMG00000014758) ENSPEMG00000009720 Rrp12 (ENSPEMG00000008437) Pgam1 (ENSPEMG00000012759) #22 Exosc1 (ENSPEMG00000010710) Zdhhc16 (ENSPEMG00000007675) Mms19 (ENSPEMG00000013174) Ubtd1 (ENSPEMG00000024360) Ankrd2 (ENSPEMG00000013562) Hoga1 (ENSPEMG00000014860) Morn4 (ENSPEMG00000027726) Pi4k2a (ENSPEMG00000016260) Avpi1 (ENSPEMG00000011234) Marveld1 (ENSPEMG00000000505) Zfyve27 (ENSPEMG00000000658) Sfrp5 (ENSPEMG00000018114) Golga7b (ENSPEMG00000019018) Crtac1 (ENSPEMG00000018527) R3hcc1l (ENSPEMG00000009290) Primates ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Tarsier MODERN SPECIES 1645 ENSTSYG00000026021 #22 MRPL4 (ENSTSYG00000034805) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Hedgehog MODERN SPECIES 3534 ENSEEUG00000005447 ENSEEUG00000005630 #22 EXOSC1 (ENSEEUG00000005647) ZDHHC16 (ENSEEUG00000005691) MMS19 (ENSEEUG00000005725) Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Artiodactyla ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Cetacea ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Odontoceti ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Sperm whale MODERN SPECIES 12 COX15 (ENSPCTG00005015651) ENTPD7 (ENSPCTG00005015609) SLC25A28 (ENSPCTG00005015533) ENSPCTG00005015512 NKX2-3 (ENSPCTG00005015458) GOT1 (ENSPCTG00005015383) CNNM1 (ENSPCTG00005015224) HPSE2 (ENSPCTG00005014453) ENSPCTG00005014329 R3HCC1L (ENSPCTG00005014293) SFRP5 (ENSPCTG00005014239) ZFYVE27 (ENSPCTG00005013655) MARVELD1 (ENSPCTG00005013584) AVPI1 (ENSPCTG00005013541) PI4K2A (ENSPCTG00005013487) ENSPCTG00005013431 #22 PGAM1 (ENSPCTG00005013367) ##22 EXOSC1 (ENSPCTG00005013217) ZDHHC16 (ENSPCTG00005012891) MMS19 (ENSPCTG00005012756) RRP12 (ENSPCTG00005011281) FRAT2 (ENSPCTG00005011203) FRAT1 (ENSPCTG00005011174) ARHGAP19 (ENSPCTG00005011029) LCOR (ENSPCTG00005010896) PIK3AP1 (ENSPCTG00005022480) TM9SF3 (ENSPCTG00005022471) TLL2 (ENSPCTG00005022462) OPALIN (ENSPCTG00005022448) DNTT (ENSPCTG00005022440) BLNK (ENSPCTG00005022431) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Carnivora ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Caniformia ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Caniformia_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Ursidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1963 ENSAMEG00000029767 #22 Giant Panda MODERN SPECIES 1694 ENSAMEG00000028993 #22 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 887 ENSAMEG00000028630 #22 ENSAMEG00000026543 #22 Giant Panda MODERN SPECIES 887 ENSAMEG00000028630 #22 ENSAMEG00000026543 #22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Chiroptera ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Microchiroptera ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Greater horseshoe bat MODERN SPECIES 7 ZNF518A (ENSRFEG00010014399) BLNK (ENSRFEG00010014241) DNTT (ENSRFEG00010013880) OPALIN (ENSRFEG00010013702) TLL2 (ENSRFEG00010013346) TM9SF3 (ENSRFEG00010013289) PIK3AP1 (ENSRFEG00010013202) ENSRFEG00010013148 ENSRFEG00010013097 LCOR (ENSRFEG00010013002) SLIT1 (ENSRFEG00010012897) FRAT1 (ENSRFEG00010012872) ARHGAP19 (ENSRFEG00010012522) FRAT2 (ENSRFEG00010012480) RRP12 (ENSRFEG00010012357) ENSRFEG00010012320 #22 EXOSC1 (ENSRFEG00010012162) ZDHHC16 (ENSRFEG00010011834) MMS19 (ENSRFEG00010011787) UBTD1 (ENSRFEG00010011733) ANKRD2 (ENSRFEG00010011484) HOGA1 (ENSRFEG00010011363) MORN4 (ENSRFEG00010011280) PI4K2A (ENSRFEG00010011240) AVPI1 (ENSRFEG00010011224) MARVELD1 (ENSRFEG00010011202) ZFYVE27 (ENSRFEG00010010662) SFRP5 (ENSRFEG00010010565) GOLGA7B (ENSRFEG00010010476) ENSRFEG00010010438 CRTAC1 (ENSRFEG00010010283) Atlantogenata ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Afrotheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.d #22 Tenrec DUPLICATION Tenrec MODERN SPECIES 3167 RRP12 (ENSETEG00000002455) ENSETEG00000002467 #22 ENSETEG00000002469 ZDHHC16 (ENSETEG00000002471) MMS19 (ENSETEG00000002473) Tenrec MODERN SPECIES 12698 ENSETEG00000006850 #22 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 13 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Boreoeutheria ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Laurasiatheria ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Eulipotyphla ANCESTRAL SPECIES 134 ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 Common shrew MODERN SPECIES 2645 ENSSARG00000000157 PGAM1 (ENSSARG00000000159) ##22 EXOSC1 (ENSSARG00000000162) ENSSARG00000000163 Laurasiatheria_a ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Artiodactyla ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Suina ANCESTRAL SPECIES 6 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Pig MODERN SPECIES 5 CC2D2B (ENSSSCG00000046471) CCNJ (ENSSSCG00000010502) ZNF518A (ENSSSCG00000010503) BLNK (ENSSSCG00000010504) DNTT (ENSSSCG00000010505) OPALIN (ENSSSCG00000010506) TLL2 (ENSSSCG00000010507) TM9SF3 (ENSSSCG00000010508) PIK3AP1 (ENSSSCG00000010509) LCOR (ENSSSCG00000010513) SLIT1 (ENSSSCG00000010512) ARHGAP19 (ENSSSCG00000037185) FRAT1 (ENSSSCG00000032821) FRAT2 (ENSSSCG00000038904) RRP12 (ENSSSCG00000010514) PGAM1 (ENSSSCG00000010517) ##22 EXOSC1 (ENSSSCG00000010518) ZDHHC16 (ENSSSCG00000010519) MMS19 (ENSSSCG00000010520) UBTD1 (ENSSSCG00000010521) ANKRD2 (ENSSSCG00000010522) HOGA1 (ENSSSCG00000010523) MORN4 (ENSSSCG00000036954) PI4K2A (ENSSSCG00000010525) AVPI1 (ENSSSCG00000036824) MARVELD1 (ENSSSCG00000010527) ZFYVE27 (ENSSSCG00000010528) SFRP5 (ENSSSCG00000010529) GOLGA7B (ENSSSCG00000040359) CRTAC1 (ENSSSCG00000010530) ENSSSCG00000010531 Artiodactyla_a ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Artiodactyla_b ANCESTRAL SPECIES 13 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Cetacea ANCESTRAL SPECIES 15 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Odontoceti ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Sperm whale MODERN SPECIES 12 ENTPD7 (ENSPCTG00005015609) SLC25A28 (ENSPCTG00005015533) ENSPCTG00005015512 NKX2-3 (ENSPCTG00005015458) GOT1 (ENSPCTG00005015383) CNNM1 (ENSPCTG00005015224) HPSE2 (ENSPCTG00005014453) ENSPCTG00005014329 R3HCC1L (ENSPCTG00005014293) SFRP5 (ENSPCTG00005014239) ZFYVE27 (ENSPCTG00005013655) MARVELD1 (ENSPCTG00005013584) AVPI1 (ENSPCTG00005013541) PI4K2A (ENSPCTG00005013487) ENSPCTG00005013431 #22 PGAM1 (ENSPCTG00005013367) ##22 EXOSC1 (ENSPCTG00005013217) ZDHHC16 (ENSPCTG00005012891) MMS19 (ENSPCTG00005012756) RRP12 (ENSPCTG00005011281) FRAT2 (ENSPCTG00005011203) FRAT1 (ENSPCTG00005011174) ARHGAP19 (ENSPCTG00005011029) LCOR (ENSPCTG00005010896) PIK3AP1 (ENSPCTG00005022480) TM9SF3 (ENSPCTG00005022471) TLL2 (ENSPCTG00005022462) OPALIN (ENSPCTG00005022448) DNTT (ENSPCTG00005022440) BLNK (ENSPCTG00005022431) ZNF518A (ENSPCTG00005022425) Odontoceti_a ANCESTRAL SPECIES 11 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Odontoceti_b ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00950000183010.a.b.a.b.b.a.a.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Monodontidae ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00950000183010.a.b.a.b.b.a.a.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Beluga whale MODERN SPECIES 65 ZNF518A (ENSDLEG00000016610) BLNK (ENSDLEG00000016546) DNTT (ENSDLEG00000016501) OPALIN (ENSDLEG00000016472) TLL2 (ENSDLEG00000016094) TM9SF3 (ENSDLEG00000016045) PIK3AP1 (ENSDLEG00000015971) ENSDLEG00000015948 LCOR (ENSDLEG00000015892) SLIT1 (ENSDLEG00000015826) ENSDLEG00000015800 ARHGAP19 (ENSDLEG00000015778) FRAT1 (ENSDLEG00000015774) FRAT2 (ENSDLEG00000015766) RRP12 (ENSDLEG00000015698) PGAM1 (ENSDLEG00000015682) ##22 EXOSC1 (ENSDLEG00000015668) ZDHHC16 (ENSDLEG00000015638) MMS19 (ENSDLEG00000015591) UBTD1 (ENSDLEG00000015580) ANKRD2 (ENSDLEG00000015568) HOGA1 (ENSDLEG00000015555) MORN4 (ENSDLEG00000015545) PI4K2A (ENSDLEG00000015532) AVPI1 (ENSDLEG00000015521) MARVELD1 (ENSDLEG00000015515) ZFYVE27 (ENSDLEG00000015495) SFRP5 (ENSDLEG00000015488) ENSDLEG00000015480 GOLGA7B (ENSDLEG00000015445) CRTAC1 (ENSDLEG00000015410) Narwhal MODERN SPECIES 311 ZNF518A (ENSMMNG00015018779) BLNK (ENSMMNG00015018860) DNTT (ENSMMNG00015018994) OPALIN (ENSMMNG00015019113) TLL2 (ENSMMNG00015019257) TM9SF3 (ENSMMNG00015019365) PIK3AP1 (ENSMMNG00015019455) ENSMMNG00015019535 LCOR (ENSMMNG00015019580) SLIT1 (ENSMMNG00015019679) ARHGAP19 (ENSMMNG00015019978) ENSMMNG00015020109 FRAT1 (ENSMMNG00015020130) FRAT2 (ENSMMNG00015020149) RRP12 (ENSMMNG00015020232) PGAM1 (ENSMMNG00015020334) ##22 EXOSC1 (ENSMMNG00015020372) ZDHHC16 (ENSMMNG00015020473) MMS19 (ENSMMNG00015020600) UBTD1 (ENSMMNG00015020639) ANKRD2 (ENSMMNG00015020671) HOGA1 (ENSMMNG00015020756) MORN4 (ENSMMNG00015020795) PI4K2A (ENSMMNG00015020825) AVPI1 (ENSMMNG00015020853) MARVELD1 (ENSMMNG00015020866) ZFYVE27 (ENSMMNG00015020926) SFRP5 (ENSMMNG00015021053) ENSMMNG00015021065 GOLGA7B (ENSMMNG00015021091) CRTAC1 (ENSMMNG00015021140) Vaquita MODERN SPECIES 7 ZNF518A (ENSPSNG00000017259) BLNK (ENSPSNG00000017379) DNTT (ENSPSNG00000018075) OPALIN (ENSPSNG00000018299) TLL2 (ENSPSNG00000018604) TM9SF3 (ENSPSNG00000018641) PIK3AP1 (ENSPSNG00000018719) ENSPSNG00000018934 LCOR (ENSPSNG00000019009) SLIT1 (ENSPSNG00000019181) ARHGAP19 (ENSPSNG00000019746) ENSPSNG00000019843 FRAT1 (ENSPSNG00000019873) FRAT2 (ENSPSNG00000019882) RRP12 (ENSPSNG00000020020) PGAM1 (ENSPSNG00000020181) ##22 EXOSC1 (ENSPSNG00000020223) ZDHHC16 (ENSPSNG00000020329) MMS19 (ENSPSNG00000020454) UBTD1 (ENSPSNG00000020532) ANKRD2 (ENSPSNG00000020585) HOGA1 (ENSPSNG00000020786) MORN4 (ENSPSNG00000020862) PI4K2A (ENSPSNG00000020904) AVPI1 (ENSPSNG00000020938) MARVELD1 (ENSPSNG00000020968) ZFYVE27 (ENSPSNG00000021039) SFRP5 (ENSPSNG00000021235) GOLGA7B (ENSPSNG00000021258) CRTAC1 (ENSPSNG00000021304) R3HCC1L (ENSPSNG00000021458) Pecora ANCESTRAL SPECIES 12 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Yarkand deer MODERN SPECIES 6 BLNK (ENSCHYG00000015608) DNTT (ENSCHYG00000015940) OPALIN (ENSCHYG00000016188) TLL2 (ENSCHYG00000016501) TM9SF3 (ENSCHYG00000016672) PIK3AP1 (ENSCHYG00000016886) LCOR (ENSCHYG00000017121) SLIT1 (ENSCHYG00000017383) ENSCHYG00000018017 ARHGAP19 (ENSCHYG00000018209) FRAT1 (ENSCHYG00000018557) FRAT2 (ENSCHYG00000018576) ENSCHYG00000018613 ENSCHYG00000018643 RRP12 (ENSCHYG00000018769) PGAM1 (ENSCHYG00000019647) ##22 ENSCHYG00000019703 ZDHHC16 (ENSCHYG00000019968) MMS19 (ENSCHYG00000020307) UBTD1 (ENSCHYG00000020651) ANKRD2 (ENSCHYG00000020741) HOGA1 (ENSCHYG00000021197) MORN4 (ENSCHYG00000021303) PI4K2A (ENSCHYG00000021371) AVPI1 (ENSCHYG00000004424) MARVELD1 (ENSCHYG00000004459) ZFYVE27 (ENSCHYG00000004712) SFRP5 (ENSCHYG00000004868) ENSCHYG00000004880 CRTAC1 (ENSCHYG00000004903) R3HCC1L (ENSCHYG00000004994) Percora_a ANCESTRAL SPECIES 14 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Siberian musk deer MODERN SPECIES 1163 ZNF518A (ENSMMSG00000022777) BLNK (ENSMMSG00000022724) DNTT (ENSMMSG00000022682) OPALIN (ENSMMSG00000022513) ENSMMSG00000022485 TLL2 (ENSMMSG00000022456) TM9SF3 (ENSMMSG00000022438) PIK3AP1 (ENSMMSG00000022410) ENSMMSG00000022393 LCOR (ENSMMSG00000022375) SLIT1 (ENSMMSG00000022238) ARHGAP19 (ENSMMSG00000021988) FRAT1 (ENSMMSG00000021930) FRAT2 (ENSMMSG00000021921) RRP12 (ENSMMSG00000021809) PGAM1 (ENSMMSG00000021766) ##22 ENSMMSG00000021434 ZDHHC16 (ENSMMSG00000021332) MMS19 (ENSMMSG00000021033) UBTD1 (ENSMMSG00000020979) ANKRD2 (ENSMMSG00000020830) HOGA1 (ENSMMSG00000020768) MORN4 (ENSMMSG00000020708) PI4K2A (ENSMMSG00000020675) AVPI1 (ENSMMSG00000020653) MARVELD1 (ENSMMSG00000020644) ZFYVE27 (ENSMMSG00000020430) SFRP5 (ENSMMSG00000020379) GOLGA7B (ENSMMSG00000020355) CRTAC1 (ENSMMSG00000020091) R3HCC1L (ENSMMSG00000020036) Bovidae ANCESTRAL SPECIES 24 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00950000183198.c.a.a.a.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Caprinae ANCESTRAL SPECIES 19 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00950000183198.c.a.a.a.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Rambouillet Sheep MODERN SPECIES 14 DNTT (ENSOARG00020023188) ENSOARG00020023269 OPALIN (ENSOARG00020013479) TLL2 (ENSOARG00020014105) TM9SF3 (ENSOARG00020014308) PIK3AP1 (ENSOARG00020014374) ENSOARG00020014565 ENSOARG00020014604 LCOR (ENSOARG00020014633) SLIT1 (ENSOARG00020014873) ENSOARG00020015779 ARHGAP19 (ENSOARG00020015846) FRAT1 (ENSOARG00020016442) FRAT2 (ENSOARG00020016463) RRP12 (ENSOARG00020016512) PGAM1 (ENSOARG00020017087) ##22 EXOSC1 (ENSOARG00020017150) ZDHHC16 (ENSOARG00020017365) MMS19 (ENSOARG00020017722) UBTD1 (ENSOARG00020018950) ANKRD2 (ENSOARG00020018993) HOGA1 (ENSOARG00020019351) MORN4 (ENSOARG00020019435) PI4K2A (ENSOARG00020019502) AVPI1 (ENSOARG00020019577) MARVELD1 (ENSOARG00020019607) ENSOARG00020019627 ZFYVE27 (ENSOARG00020019673) SFRP5 (ENSOARG00020020728) GOLGA7B (ENSOARG00020020851) CRTAC1 (ENSOARG00020020932) Goat DUPLICATION Goat MODERN SPECIES 18 ZNF518A (ENSCHIG00000014520) BLNK (ENSCHIG00000017513) DNTT (ENSCHIG00000004835) OPALIN (ENSCHIG00000017059) TLL2 (ENSCHIG00000007274) TM9SF3 (ENSCHIG00000012274) ENSCHIG00000013021 PIK3AP1 (ENSCHIG00000020278) LCOR (ENSCHIG00000008908) SLIT1 (ENSCHIG00000011034) ENSCHIG00000014737 ARHGAP19 (ENSCHIG00000009996) FRAT1 (ENSCHIG00000008538) FRAT2 (ENSCHIG00000009856) RRP12 (ENSCHIG00000011876) PGAM1 (ENSCHIG00000023008) ##22 EXOSC1 (ENSCHIG00000015253) ENSCHIG00000024556 MMS19 (ENSCHIG00000015342) UBTD1 (ENSCHIG00000020670) ANKRD2 (ENSCHIG00000011698) C10orf62 (ENSCHIG00000025583) HOGA1 (ENSCHIG00000018410) MORN4 (ENSCHIG00000015248) PI4K2A (ENSCHIG00000019481) AVPI1 (ENSCHIG00000014474) MARVELD1 (ENSCHIG00000019321) ZFYVE27 (ENSCHIG00000015749) SFRP5 (ENSCHIG00000024678) GOLGA7B (ENSCHIG00000020686) CRTAC1 (ENSCHIG00000021520) Goat MODERN SPECIES SLCO2A1 (ENSCHIG00000019191) RYK (ENSCHIG00000023154) AMOTL2 (ENSCHIG00000014704) ANAPC13 (ENSCHIG00000020500) CEP63 (ENSCHIG00000026357) KY (ENSCHIG00000023964) EPHB1 (ENSCHIG00000019310) PPP2R3A (ENSCHIG00000009878) MSL2 (ENSCHIG00000018815) PCCB (ENSCHIG00000021083) STAG1 (ENSCHIG00000014075) SLC35G2 (ENSCHIG00000010906) NCK1 (ENSCHIG00000012541) IL20RB (ENSCHIG00000018646) SOX14 (ENSCHIG00000010801) ENSCHIG00000016824 ##22 CLDN18 (ENSCHIG00000024508) DZIP1L (ENSCHIG00000015630) A4GNT (ENSCHIG00000017659) DBR1 (ENSCHIG00000026937) ARMC8 (ENSCHIG00000001594) NME9 (ENSCHIG00000014298) MRAS (ENSCHIG00000025837) ESYT3 (ENSCHIG00000015996) CEP70 (ENSCHIG00000002428) FAIM (ENSCHIG00000017833) ENSCHIG00000016904 PIK3CB (ENSCHIG00000019728) ENSCHIG00000015101 MRPS22 (ENSCHIG00000027042) COPB2 (ENSCHIG00000022228) Bovinae ANCESTRAL SPECIES 22 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00950000183198.c.a.a.a.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 American bison MODERN SPECIES 2808 ENSBBBG00000022157 CCNJ (ENSBBBG00000022128) ZNF518A (ENSBBBG00000022116) BLNK (ENSBBBG00000022102) DNTT (ENSBBBG00000021886) OPALIN (ENSBBBG00000007059) TLL2 (ENSBBBG00000007109) TM9SF3 (ENSBBBG00000021764) PIK3AP1 (ENSBBBG00000021738) ENSBBBG00000021693 LCOR (ENSBBBG00000021665) SLIT1 (ENSBBBG00000005755) ARHGAP19 (ENSBBBG00000021596) ENSBBBG00000005727 RRP12 (ENSBBBG00000021482) PGAM1 (ENSBBBG00000021195) ##22 EXOSC1 (ENSBBBG00000021190) ZDHHC16 (ENSBBBG00000021113) MMS19 (ENSBBBG00000020854) UBTD1 (ENSBBBG00000020612) ANKRD2 (ENSBBBG00000020599) HOGA1 (ENSBBBG00000005549) MORN4 (ENSBBBG00000020533) PI4K2A (ENSBBBG00000020520) AVPI1 (ENSBBBG00000007237) MARVELD1 (ENSBBBG00000005536) ZFYVE27 (ENSBBBG00000020489) SFRP5 (ENSBBBG00000000636) GOLGA7B (ENSBBBG00000000641) CRTAC1 (ENSBBBG00000000665) ENSBBBG00000020378 Bos DUPLICATION Bos DUPLICATION Bos ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.c.a ##22 Bos_b ANCESTRAL SPECIES 3 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.a.b.b.a ENSGT00390000005250 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT00530000063335.B.a.b ENSGT00940000156820.a.a ENSGT00390000017892 ENSGT00390000014593 ENSGT00940000156117 ENSGT00550000074816.B ENSGT01100000263511.b.a.b.a.b.a.b.a.a.a.a.a.b.a.a ENSGT00940000160905 ENSGT00940000157366.f ENSGT00940000153636.b ENSGT00950000182926.b.d.c.a.c.a ##22 ENSGT00940000157611 ENSGT00440000033805.h.a ENSGT00390000017130 ENSGT00940000156165 ENSGT00950000183029.A.n.a ENSGT01100000263481.n.a.a.a.b.b.b.a.a.a.b.a.a.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221.l ENSGT00960000191550 ENSGT00940000157708 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a ENSGT00940000158164 ENSGT00390000001325 ENSGT00390000005323 Hybrid Bos Indicus MODERN SPECIES 27 PIP5K1B (ENSBIXG00005002661) FXN (ENSBIXG00005016495) TJP2 (ENSBIXG00005016444) ENTREP1 (ENSBIXG00005015945) APBA1 (ENSBIXG00005000159) PTAR1 (ENSBIXG00005015792) CFAP95 (ENSBIXG00005015744) MAMDC2 (ENSBIXG00005015686) ENSBIXG00005015663 ENSBIXG00005015611 ENSBIXG00005002258 ENSBIXG00005015415 KLF9 (ENSBIXG00005015399) TRPM3 (ENSBIXG00005015290) CEMIP2 (ENSBIXG00005002091) ENSBIXG00005014723 ##22 ENSBIXG00005014713 ABHD17B (ENSBIXG00005014706) ENSBIXG00005014654 GDA (ENSBIXG00005014619) ENSBIXG00005014554 ZFAND5 (ENSBIXG00005014532) ENSBIXG00005014461 ENSBIXG00005014453 ENSBIXG00005001926 TMC1 (ENSBIXG00005005407) ALDH1A1 (ENSBIXG00005001914) ENSBIXG00005014241 ENSBIXG00005014214 RORB (ENSBIXG00005006505) ENSBIXG00005014163 Bos_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.c.a ##22 Domestic yak MODERN SPECIES 26 TMEM252 (ENSBGRG00000002724) PIP5K1B (ENSBGRG00000002519) ENSBGRG00000002457 TJP2 (ENSBGRG00000001216) ENTREP1 (ENSBGRG00000000954) APBA1 (ENSBGRG00000000786) PTAR1 (ENSBGRG00000000713) CFAP95 (ENSBGRG00000000656) MAMDC2 (ENSBGRG00000000561) ENSBGRG00000000527 ENSBGRG00000000522 ENSBGRG00000000389 KLF9 (ENSBGRG00000000307) ENSBGRG00000024088 TRPM3 (ENSBGRG00000023218) ENSBGRG00000023134 ##22 CEMIP2 (ENSBGRG00000022945) ABHD17B (ENSBGRG00000022905) C9orf85 (ENSBGRG00000022827) ENSBGRG00000022780 GDA (ENSBGRG00000022461) ENSBGRG00000022438 ENSBGRG00000022416 ZFAND5 (ENSBGRG00000022368) ENSBGRG00000022352 TMC1 (ENSBGRG00000022319) ENSBGRG00000022195 ENSBGRG00000022028 ENSBGRG00000021968 ENSBGRG00000021937 RORB (ENSBGRG00000021739) Bos ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.c.b ##22 Bos_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.c.b ##22 Domestic yak MODERN SPECIES 11 ENSBGRG00000008249 ENSBGRG00000008056 ENSBGRG00000007929 ENSBGRG00000007873 CAB39 (ENSBGRG00000007648) ITM2C (ENSBGRG00000007373) SPATA3 (ENSBGRG00000023080) C2orf72 (ENSBGRG00000023040) HTR2B (ENSBGRG00000022997) PSMD1 (ENSBGRG00000022636) ARMC9 (ENSBGRG00000021327) B3GNT7 (ENSBGRG00000021246) ENSBGRG00000021053 NMUR1 (ENSBGRG00000021016) PTMA (ENSBGRG00000020966) ENSBGRG00000020936 ##22 PDE6D (ENSBGRG00000020792) NPPC (ENSBGRG00000020756) COPS7B (ENSBGRG00000020160) DIS3L2 (ENSBGRG00000019933) ENSBGRG00000019258 ENSBGRG00000018978 ENSBGRG00000018889 ENSBGRG00000018743 ECEL1 (ENSBGRG00000018392) PRSS56 (ENSBGRG00000018237) CHRND (ENSBGRG00000018073) CHRNG (ENSBGRG00000017953) ENSBGRG00000017390 ENSBGRG00000017352 PHC2 (ENSBGRG00000017122) Bos ANCESTRAL SPECIES 23 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00950000183198.c.a.a.a.a.d ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.d ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Bos_b ANCESTRAL SPECIES 23 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00950000183198.c.a.a.a.a.d ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.d ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Cow MODERN SPECIES 18 DNTT (ENSBTAG00000020427) OPALIN (ENSBTAG00000011740) TLL2 (ENSBTAG00000011743) TM9SF3 (ENSBTAG00000016298) PIK3AP1 (ENSBTAG00000019872) ENSBTAG00000055267 LCOR (ENSBTAG00000046239) SLIT1 (ENSBTAG00000043991) ENSBTAG00000050121 ARHGAP19 (ENSBTAG00000040427) ENSBTAG00000050994 FRAT1 (ENSBTAG00000007956) FRAT2 (ENSBTAG00000046701) RRP12 (ENSBTAG00000002191) ENSBTAG00000050033 PGAM1 (ENSBTAG00000012697) ##22 EXOSC1 (ENSBTAG00000012699) ZDHHC16 (ENSBTAG00000012702) MMS19 (ENSBTAG00000012704) UBTD1 (ENSBTAG00000012719) ANKRD2 (ENSBTAG00000012720) HOGA1 (ENSBTAG00000012721) MORN4 (ENSBTAG00000011137) PI4K2A (ENSBTAG00000002010) AVPI1 (ENSBTAG00000023947) MARVELD1 (ENSBTAG00000013478) ZFYVE27 (ENSBTAG00000018564) SFRP5 (ENSBTAG00000018566) GOLGA7B (ENSBTAG00000008100) CRTAC1 (ENSBTAG00000008102) R3HCC1L (ENSBTAG00000021856) Hybrid Bos Indicus MODERN SPECIES 18 TLL2 (ENSBIXG00005002281) TM9SF3 (ENSBIXG00005028883) PIK3AP1 (ENSBIXG00005005043) ENSBIXG00005005048 ENSBIXG00005002223 ENSBIXG00005028924 LCOR (ENSBIXG00005028951) ENSBIXG00005028964 SLIT1 (ENSBIXG00005001987) ENSBIXG00005029073 ARHGAP19 (ENSBIXG00005029131) FRAT1 (ENSBIXG00005005196) FRAT2 (ENSBIXG00005029158) ENSBIXG00005005204 RRP12 (ENSBIXG00005005234) PGAM1 (ENSBIXG00005001611) ##22 EXOSC1 (ENSBIXG00005005275) ZDHHC16 (ENSBIXG00005009297) MMS19 (ENSBIXG00005009397) ANKRD2 (ENSBIXG00005009522) HOGA1 (ENSBIXG00005009628) MORN4 (ENSBIXG00005000550) AVPI1 (ENSBIXG00005009706) PI4K2A (ENSBIXG00005006986) SFRP5 (ENSBIXG00005009770) ZFYVE27 (ENSBIXG00005000645) CRTAC1 (ENSBIXG00005010075) ENSBIXG00005010106 R3HCC1L (ENSBIXG00005010153) LOXL4 (ENSBIXG00005010186) PYROXD2 (ENSBIXG00005010212) Bos_a ANCESTRAL SPECIES 17 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.d ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Domestic yak MODERN SPECIES 17 CCNJ (ENSBGRG00000025803) ZNF518A (ENSBGRG00000025820) BLNK (ENSBGRG00000025843) DNTT (ENSBGRG00000025937) OPALIN (ENSBGRG00000025982) TLL2 (ENSBGRG00000026019) TM9SF3 (ENSBGRG00000026055) PIK3AP1 (ENSBGRG00000026070) LCOR (ENSBGRG00000026094) ENSBGRG00000026107 SLIT1 (ENSBGRG00000026122) ARHGAP19 (ENSBGRG00000026190) FRAT1 (ENSBGRG00000015960) FRAT2 (ENSBGRG00000015978) RRP12 (ENSBGRG00000016021) PGAM1 (ENSBGRG00000016427) ##22 EXOSC1 (ENSBGRG00000016530) ZDHHC16 (ENSBGRG00000016715) MMS19 (ENSBGRG00000017310) UBTD1 (ENSBGRG00000017993) ANKRD2 (ENSBGRG00000018070) HOGA1 (ENSBGRG00000018609) C10orf62 (ENSBGRG00000018744) MORN4 (ENSBGRG00000018805) PI4K2A (ENSBGRG00000018890) AVPI1 (ENSBGRG00000018935) MARVELD1 (ENSBGRG00000018953) ZFYVE27 (ENSBGRG00000019044) SFRP5 (ENSBGRG00000019974) GOLGA7B (ENSBGRG00000020042) CRTAC1 (ENSBGRG00000020315) Wild yak MODERN SPECIES 1253 RRP12 (ENSBMUG00000019054) PGAM1 (ENSBMUG00000019106) ##22 EXOSC1 (ENSBMUG00000019207) ZDHHC16 (ENSBMUG00000019233) MMS19 (ENSBMUG00000019370) UBTD1 (ENSBMUG00000019460) ANKRD2 (ENSBMUG00000019496) HOGA1 (ENSBMUG00000019517) MORN4 (ENSBMUG00000019532) PI4K2A (ENSBMUG00000019561) AVPI1 (ENSBMUG00000019579) ZFYVE27 (ENSBMUG00000019816) SFRP5 (ENSBMUG00000019980) GOLGA7B (ENSBMUG00000019984) CRTAC1 (ENSBMUG00000020041) R3HCC1L (ENSBMUG00000020105) LOXL4 (ENSBMUG00000020121) Laurasiatheria_b ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Laurasiatheria_c ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Equus ANCESTRAL SPECIES 9 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Donkey MODERN SPECIES 11 CCNJ (ENSEASG00005028066) ZNF518A (ENSEASG00005011333) BLNK (ENSEASG00005011331) DNTT (ENSEASG00005011329) OPALIN (ENSEASG00005025073) TLL2 (ENSEASG00005009505) TM9SF3 (ENSEASG00005009272) PIK3AP1 (ENSEASG00005009264) ENSEASG00005009257 LCOR (ENSEASG00005033100) SLIT1 (ENSEASG00005008822) ARHGAP19 (ENSEASG00005008703) ENSEASG00005037817 ENSEASG00005029296 RRP12 (ENSEASG00005008693) PGAM1 (ENSEASG00005008690) ##22 ENSEASG00005026559 EXOSC1 (ENSEASG00005036429) ZDHHC16 (ENSEASG00005008679) MMS19 (ENSEASG00005008675) UBTD1 (ENSEASG00005033530) ANKRD2 (ENSEASG00005008671) C10orf62 (ENSEASG00005033481) HOGA1 (ENSEASG00005008670) MORN4 (ENSEASG00005034389) PI4K2A (ENSEASG00005008665) AVPI1 (ENSEASG00005008664) MARVELD1 (ENSEASG00005008661) ZFYVE27 (ENSEASG00005008657) SFRP5 (ENSEASG00005027560) GOLGA7B (ENSEASG00005008652) Horse MODERN SPECIES ENTPD1 (ENSECAG00000016258) CC2D2B (ENSECAG00000016113) CCNJ (ENSECAG00000016020) ZNF518A (ENSECAG00000016003) BLNK (ENSECAG00000015745) DNTT (ENSECAG00000015340) TLL2 (ENSECAG00000014145) TM9SF3 (ENSECAG00000013751) PIK3AP1 (ENSECAG00000013623) LCOR (ENSECAG00000013509) SLIT1 (ENSECAG00000011973) ARHGAP19 (ENSECAG00000011823) FRAT1 (ENSECAG00000028005) FRAT2 (ENSECAG00000040596) RRP12 (ENSECAG00000010892) PGAM1 (ENSECAG00000010786) ##22 EXOSC1 (ENSECAG00000010621) ZDHHC16 (ENSECAG00000010295) MMS19 (ENSECAG00000009259) UBTD1 (ENSECAG00000041844) ANKRD2 (ENSECAG00000008916) C10orf62 (ENSECAG00000046563) HOGA1 (ENSECAG00000008762) MORN4 (ENSECAG00000053674) PI4K2A (ENSECAG00000008327) AVPI1 (ENSECAG00000008293) MARVELD1 (ENSECAG00000035735) ZFYVE27 (ENSECAG00000008070) SFRP5 (ENSECAG00000026876) GOLGA7B (ENSECAG00000007985) CRTAC1 (ENSECAG00000007097) Chiroptera ANCESTRAL SPECIES 6 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Megabat MODERN SPECIES 3053 TM9SF3 (ENSPVAG00000003361) PIK3AP1 (ENSPVAG00000003363) ENSPVAG00000003364 LCOR (ENSPVAG00000003365) SLIT1 (ENSPVAG00000003366) ARHGAP19 (ENSPVAG00000003367) FRAT1 (ENSPVAG00000003368) FRAT2 (ENSPVAG00000003369) RRP12 (ENSPVAG00000003370) PGAM1 (ENSPVAG00000003371) ##22 EXOSC1 (ENSPVAG00000003372) ZDHHC16 (ENSPVAG00000003374) MMS19 (ENSPVAG00000003375) UBTD1 (ENSPVAG00000003379) ANKRD2 (ENSPVAG00000003380) HOGA1 (ENSPVAG00000003382) C10orf62 (ENSPVAG00000003384) MORN4 (ENSPVAG00000003385) PI4K2A (ENSPVAG00000003386) ENSPVAG00000003387 MARVELD1 (ENSPVAG00000003388) ZFYVE27 (ENSPVAG00000003389) SFRP5 (ENSPVAG00000003390) GOLGA7B (ENSPVAG00000003391) CRTAC1 (ENSPVAG00000003392) Microchiroptera ANCESTRAL SPECIES 5 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Microbat MODERN SPECIES 1003 ENSMLUG00000006617 ENSMLUG00000014058 BLNK (ENSMLUG00000004792) ENSMLUG00000028644 ENSMLUG00000025630 DNTT (ENSMLUG00000009288) OPALIN (ENSMLUG00000009306) TLL2 (ENSMLUG00000009321) TM9SF3 (ENSMLUG00000012121) ENSMLUG00000000494 LCOR (ENSMLUG00000015786) SLIT1 (ENSMLUG00000015796) ARHGAP19 (ENSMLUG00000023489) ENSMLUG00000024055 RRP12 (ENSMLUG00000017160) PGAM1 (ENSMLUG00000009117) ##22 EXOSC1 (ENSMLUG00000009228) ZDHHC16 (ENSMLUG00000009246) MMS19 (ENSMLUG00000009260) UBTD1 (ENSMLUG00000009303) ANKRD2 (ENSMLUG00000009324) HOGA1 (ENSMLUG00000009344) MORN4 (ENSMLUG00000009367) PI4K2A (ENSMLUG00000028240) AVPI1 (ENSMLUG00000028157) ZFYVE27 (ENSMLUG00000009377) SFRP5 (ENSMLUG00000025702) GOLGA7B (ENSMLUG00000015977) CRTAC1 (ENSMLUG00000015981) ENSMLUG00000023911 R3HCC1L (ENSMLUG00000000430) Carnivora ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Caniformia ANCESTRAL SPECIES 13 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Caniformia_b ANCESTRAL SPECIES 10 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Ursidae ANCESTRAL SPECIES 5 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Giant Panda MODERN SPECIES 16 CC2D2B (ENSAMEG00000000351) CCNJ (ENSAMEG00000000344) ZNF518A (ENSAMEG00000018804) BLNK (ENSAMEG00000000311) DNTT (ENSAMEG00000000264) OPALIN (ENSAMEG00000025851) TLL2 (ENSAMEG00000000197) TM9SF3 (ENSAMEG00000000195) PIK3AP1 (ENSAMEG00000000188) ENSAMEG00000030117 LCOR (ENSAMEG00000018798) SLIT1 (ENSAMEG00000000150) ARHGAP19 (ENSAMEG00000000146) FRAT1 (ENSAMEG00000024721) RRP12 (ENSAMEG00000000134) PGAM1 (ENSAMEG00000000132) ##22 EXOSC1 (ENSAMEG00000000129) ZDHHC16 (ENSAMEG00000000123) MMS19 (ENSAMEG00000000114) UBTD1 (ENSAMEG00000028810) ANKRD2 (ENSAMEG00000000108) HOGA1 (ENSAMEG00000000107) MORN4 (ENSAMEG00000000101) PI4K2A (ENSAMEG00000000097) ENSAMEG00000000096 MARVELD1 (ENSAMEG00000000095) ZFYVE27 (ENSAMEG00000000090) SFRP5 (ENSAMEG00000000089) CRTAC1 (ENSAMEG00000000081) GOLGA7B (ENSAMEG00000000088) R3HCC1L (ENSAMEG00000000078) Ursus ANCESTRAL SPECIES 7 ENSGT01100000263542.C ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b American black bear MODERN SPECIES 1020 RRP12 (ENSUAMG00000009092) PGAM1 (ENSUAMG00000010263) ##22 EXOSC1 (ENSUAMG00000010266) ZDHHC16 (ENSUAMG00000010270) ENSUAMG00000010275 ENSUAMG00000010280 UBTD1 (ENSUAMG00000010282) ANKRD2 (ENSUAMG00000010285) HOGA1 (ENSUAMG00000010287) C10orf62 (ENSUAMG00000010289) MORN4 (ENSUAMG00000010290) PI4K2A (ENSUAMG00000010291) AVPI1 (ENSUAMG00000010293) ZFYVE27 (ENSUAMG00000010295) SFRP5 (ENSUAMG00000010297) Polar bear MODERN SPECIES 92 TCTN3 (ENSUMAG00000021345) ENTPD1 (ENSUMAG00000021352) CC2D2B (ENSUMAG00000021359) CCNJ (ENSUMAG00000021372) ENSUMAG00000021388 DNTT (ENSUMAG00000021390) OPALIN (ENSUMAG00000021392) TLL2 (ENSUMAG00000021398) TM9SF3 (ENSUMAG00000021413) PIK3AP1 (ENSUMAG00000021435) ENSUMAG00000021531 LCOR (ENSUMAG00000021534) SLIT1 (ENSUMAG00000021542) ARHGAP19 (ENSUMAG00000021549) RRP12 (ENSUMAG00000021621) PGAM1 (ENSUMAG00000022000) ##22 EXOSC1 (ENSUMAG00000022002) ZDHHC16 (ENSUMAG00000022010) MMS19 (ENSUMAG00000022094) UBTD1 (ENSUMAG00000022418) ANKRD2 (ENSUMAG00000022422) HOGA1 (ENSUMAG00000022428) C10orf62 (ENSUMAG00000022429) MORN4 (ENSUMAG00000022435) PI4K2A (ENSUMAG00000022461) AVPI1 (ENSUMAG00000022522) ZFYVE27 (ENSUMAG00000022526) GOLGA7B (ENSUMAG00000022532) CRTAC1 (ENSUMAG00000022534) R3HCC1L (ENSUMAG00000022536) LOXL4 (ENSUMAG00000022540) Mustelinae ANCESTRAL SPECIES 29 ENSGT01100000263542.C ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Ferret MODERN SPECIES 187 ENSMPUG00000017099 CC2D2B (ENSMPUG00000017095) CCNJ (ENSMPUG00000017092) ZNF518A (ENSMPUG00000020134) BLNK (ENSMPUG00000017088) DNTT (ENSMPUG00000017084) OPALIN (ENSMPUG00000017082) TLL2 (ENSMPUG00000017056) TM9SF3 (ENSMPUG00000017054) PIK3AP1 (ENSMPUG00000017052) LCOR (ENSMPUG00000017050) SLIT1 (ENSMPUG00000017049) ARHGAP19 (ENSMPUG00000017048) FRAT2 (ENSMPUG00000017047) RRP12 (ENSMPUG00000017046) PGAM1 (ENSMPUG00000017045) ##22 EXOSC1 (ENSMPUG00000017044) ZDHHC16 (ENSMPUG00000017043) MMS19 (ENSMPUG00000017041) UBTD1 (ENSMPUG00000017040) ANKRD2 (ENSMPUG00000017039) HOGA1 (ENSMPUG00000017038) MORN4 (ENSMPUG00000017037) PI4K2A (ENSMPUG00000017036) AVPI1 (ENSMPUG00000017034) SFRP5 (ENSMPUG00000017033) ZFYVE27 (ENSMPUG00000017032) ENSMPUG00000017031 GOLGA7B (ENSMPUG00000017027) CRTAC1 (ENSMPUG00000017026) R3HCC1L (ENSMPUG00000017025) American mink MODERN SPECIES 25 CC2D2B (ENSNVIG00000000061) CCNJ (ENSNVIG00000000041) ZNF518A (ENSNVIG00000021174) BLNK (ENSNVIG00000021085) DNTT (ENSNVIG00000021063) OPALI (ENSNVIG00000020971) TLL2 (ENSNVIG00000020943) TM9SF3 (ENSNVIG00000020907) PIK3AP1 (ENSNVIG00000020853) ENSNVIG00000020852 LCOR (ENSNVIG00000020819) SLIT1 (ENSNVIG00000020673) ARHGAP19 (ENSNVIG00000020620) ENSNVIG00000020615 RRP12 (ENSNVIG00000020453) PGAM1 (ENSNVIG00000020444) ##22 EXOSC1 (ENSNVIG00000020409) ZDHHC16 (ENSNVIG00000020289) MMS19 (ENSNVIG00000020128) UBTD1 (ENSNVIG00000020107) ANKRD2 (ENSNVIG00000020081) HOGA1 (ENSNVIG00000020057) MORN4 (ENSNVIG00000020040) PI4K2A (ENSNVIG00000020017) AVPI1 (ENSNVIG00000019986) MARVELD1 (ENSNVIG00000019972) ZFYVE27 (ENSNVIG00000019905) SFRP5 (ENSNVIG00000019893) GOLGA7B (ENSNVIG00000019876) CRTAC1 (ENSNVIG00000019780) R3HCC1L (ENSNVIG00000019732) Canidae ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872.b ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Red fox MODERN SPECIES CC2D2B (ENSVVUG00000022896) CCNJ (ENSVVUG00000022906) ZNF518A (ENSVVUG00000022923) BLNK (ENSVVUG00000022925) DNTT (ENSVVUG00000022935) OPALIN (ENSVVUG00000022943) TLL2 (ENSVVUG00000022956) TM9SF3 (ENSVVUG00000022966) PIK3AP1 (ENSVVUG00000022997) LCOR (ENSVVUG00000023048) ENSVVUG00000023056 ENSVVUG00000023060 SLIT1 (ENSVVUG00000023084) ARHGAP19 (ENSVVUG00000023153) RRP12 (ENSVVUG00000023168) PGAM1 (ENSVVUG00000023188) ##22 EXOSC1 (ENSVVUG00000023192) ZDHHC16 (ENSVVUG00000023199) MMS19 (ENSVVUG00000023217) UBTD1 (ENSVVUG00000023233) ANKRD2 (ENSVVUG00000023235) HOGA1 (ENSVVUG00000023238) C10orf62 (ENSVVUG00000023240) MORN4 (ENSVVUG00000023247) PI4K2A (ENSVVUG00000023252) AVPI1 (ENSVVUG00000023255) MARVELD1 (ENSVVUG00000023256) ZFYVE27 (ENSVVUG00000023261) SFRP5 (ENSVVUG00000023267) CRTAC1 (ENSVVUG00000023277) R3HCC1L (ENSVVUG00000023317) Canis_lupus ANCESTRAL SPECIES 20 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872.b ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Dog MODERN SPECIES 20 ZNF518A (ENSCAFG00845026153) BLNK (ENSCAFG00845026424) DNTT (ENSCAFG00845026839) OPALIN (ENSCAFG00845026993) TLL2 (ENSCAFG00845027238) TM9SF3 (ENSCAFG00845027322) PIK3AP1 (ENSCAFG00845027381) LCOR (ENSCAFG00845027548) ENSCAFG00845027781 ENSCAFG00845027799 SLIT1 (ENSCAFG00845027970) ARHGAP19 (ENSCAFG00845028649) FRAT1 (ENSCAFG00845028712) ENSCAFG00845028731 RRP12 (ENSCAFG00845028854) PGAM1 (ENSCAFG00845029088) ##22 EXOSC1 (ENSCAFG00845029157) ZDHHC16 (ENSCAFG00845029297) MMS19 (ENSCAFG00845029527) UBTD1 (ENSCAFG00845029690) ANKRD2 (ENSCAFG00845029765) HOGA1 (ENSCAFG00845029887) C10orf62 (ENSCAFG00845029917) MORN4 (ENSCAFG00845029947) PI4K2A (ENSCAFG00845029994) ENSCAFG00845030048 MARVELD1 (ENSCAFG00845030060) ZFYVE27 (ENSCAFG00845030149) SFRP5 (ENSCAFG00845030226) CRTAC1 (ENSCAFG00845030290) GOLGA7B (ENSCAFG00845030415) Dingo MODERN SPECIES 165 BLNK (ENSCAFG00020005599) DNTT (ENSCAFG00020005610) OPALIN (ENSCAFG00020005622) TLL2 (ENSCAFG00020005645) TM9SF3 (ENSCAFG00020005750) PIK3AP1 (ENSCAFG00020005759) ENSCAFG00020005788 ENSCAFG00020005791 ENSCAFG00020005797 LCOR (ENSCAFG00020005805) ENSCAFG00020005808 SLIT1 (ENSCAFG00020005820) FRAT1 (ENSCAFG00020005985) FRAT2 (ENSCAFG00020005987) RRP12 (ENSCAFG00020005991) PGAM1 (ENSCAFG00020006000) ##22 EXOSC1 (ENSCAFG00020006002) ZDHHC16 (ENSCAFG00020006003) MMS19 (ENSCAFG00020006008) UBTD1 (ENSCAFG00020006013) ANKRD2 (ENSCAFG00020006014) HOGA1 (ENSCAFG00020006037) C10orf62 (ENSCAFG00020006047) MORN4 (ENSCAFG00020006048) PI4K2A (ENSCAFG00020006060) ENSCAFG00020006100 MARVELD1 (ENSCAFG00020006102) ZFYVE27 (ENSCAFG00020006105) SFRP5 (ENSCAFG00020006107) GOLGA7B (ENSCAFG00020006112) CRTAC1 (ENSCAFG00020006114) Felidae ANCESTRAL SPECIES 14 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT01030000235142.d.a ENSGT00940000162611.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Cat MODERN SPECIES 242 CCNJ (ENSFCAG00000028842) ZNF518A (ENSFCAG00000026328) BLNK (ENSFCAG00000007140) DNTT (ENSFCAG00000007141) OPALIN (ENSFCAG00000036134) TLL2 (ENSFCAG00000007143) TM9SF3 (ENSFCAG00000026597) PIK3AP1 (ENSFCAG00000018554) ENSFCAG00000052884 LCOR (ENSFCAG00000002718) SLIT1 (ENSFCAG00000002719) ARHGAP19 (ENSFCAG00000022779) FRAT1 (ENSFCAG00000002720) FRAT2 (ENSFCAG00000042380) RRP12 (ENSFCAG00000028639) PGAM1 (ENSFCAG00000040309) ##22 EXOSC1 (ENSFCAG00000040563) ZDHHC16 (ENSFCAG00000013425) MMS19 (ENSFCAG00000013426) UBTD1 (ENSFCAG00000024320) ANKRD2 (ENSFCAG00000013428) HOGA1 (ENSFCAG00000024587) MORN4 (ENSFCAG00000028227) PI4K2A (ENSFCAG00000013431) AVPI1 (ENSFCAG00000027156) MARVELD1 (ENSFCAG00000041291) ZFYVE27 (ENSFCAG00000013433) SFRP5 (ENSFCAG00000038195) CRTAC1 (ENSFCAG00000013435) R3HCC1L (ENSFCAG00000030301) LOXL4 (ENSFCAG00000009345) Panthera ANCESTRAL SPECIES 8 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Panthera_a ANCESTRAL SPECIES 9 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b lion MODERN SPECIES 11 ZNF518A (ENSPLOG00000010829) BLNK (ENSPLOG00000010748) DNTT (ENSPLOG00000010620) OPALIN (ENSPLOG00000010434) TLL2 (ENSPLOG00000010054) TM9SF3 (ENSPLOG00000009950) PIK3AP1 (ENSPLOG00000009896) ENSPLOG00000009855 ENSPLOG00000009829 LCOR (ENSPLOG00000009797) SLIT1 (ENSPLOG00000009381) ARHGAP19 (ENSPLOG00000009135) FRAT1 (ENSPLOG00000009063) FRAT2 (ENSPLOG00000009047) RRP12 (ENSPLOG00000008947) PGAM1 (ENSPLOG00000008827) ##22 EXOSC1 (ENSPLOG00000008570) ZDHHC16 (ENSPLOG00000008436) MMS19 (ENSPLOG00000008337) UBTD1 (ENSPLOG00000008292) ANKRD2 (ENSPLOG00000008119) HOGA1 (ENSPLOG00000008038) MORN4 (ENSPLOG00000007986) PI4K2A (ENSPLOG00000007948) AVPI1 (ENSPLOG00000007926) MARVELD1 (ENSPLOG00000007915) ZFYVE27 (ENSPLOG00000007744) SFRP5 (ENSPLOG00000007685) GOLGA7B (ENSPLOG00000007655) CRTAC1 (ENSPLOG00000007504) R3HCC1L (ENSPLOG00000007438) leopard MODERN SPECIES 33 ENSPPRG00000011637 DNTT (ENSPPRG00000011606) OPALIN (ENSPPRG00000010536) TLL2 (ENSPPRG00000009757) TM9SF3 (ENSPPRG00000008064) PIK3AP1 (ENSPPRG00000007900) LCOR (ENSPPRG00000007441) SLIT1 (ENSPPRG00000005888) ARHGAP19 (ENSPPRG00000003021) FRAT1 (ENSPPRG00000021735) FRAT2 (ENSPPRG00000021720) RRP12 (ENSPPRG00000002029) PGAM1 (ENSPPRG00000022981) ##22 EXOSC1 (ENSPPRG00000023366) ZDHHC16 (ENSPPRG00000024202) MMS19 (ENSPPRG00000016622) UBTD1 (ENSPPRG00000009577) ANKRD2 (ENSPPRG00000009388) HOGA1 (ENSPPRG00000008700) MORN4 (ENSPPRG00000008387) PI4K2A (ENSPPRG00000007831) AVPI1 (ENSPPRG00000007713) MARVELD1 (ENSPPRG00000021353) ZFYVE27 (ENSPPRG00000006534) SFRP5 (ENSPPRG00000004042) GOLGA7B (ENSPPRG00000003605) CRTAC1 (ENSPPRG00000003319) ENSPPRG00000002263 Tiger MODERN SPECIES 136 TCTN3 (ENSPTIG00000022055) ENTPD1 (ENSPTIG00000004212) CC2D2B (ENSPTIG00000007848) CCNJ (ENSPTIG00000011284) ZNF518A (ENSPTIG00000002660) BLNK (ENSPTIG00000012472) DNTT (ENSPTIG00000017792) OPALIN (ENSPTIG00000021294) TLL2 (ENSPTIG00000006648) TM9SF3 (ENSPTIG00000008859) PIK3AP1 (ENSPTIG00000010276) LCOR (ENSPTIG00000011664) SLIT1 (ENSPTIG00000013365) ARHGAP19 (ENSPTIG00000020172) RRP12 (ENSPTIG00000004428) PGAM1 (ENSPTIG00000016815) ##22 EXOSC1 (ENSPTIG00000017701) ZDHHC16 (ENSPTIG00000019919) MMS19 (ENSPTIG00000021793) UBTD1 (ENSPTIG00000012419) ANKRD2 (ENSPTIG00000012729) HOGA1 (ENSPTIG00000014480) C10orf62 (ENSPTIG00000015070) MORN4 (ENSPTIG00000015742) PI4K2A (ENSPTIG00000016813) AVPI1 (ENSPTIG00000017197) ZFYVE27 (ENSPTIG00000018038) GOLGA7B (ENSPTIG00000020956) CRTAC1 (ENSPTIG00000021313) ENSPTIG00000005720 LOXL4 (ENSPTIG00000006871) Euarchontoglires ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Primates ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Strepsirrhini ANCESTRAL SPECIES 11 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Bushbaby MODERN SPECIES 299 ENSOGAG00000004583 KHDRBS1 (ENSOGAG00000004582) ENSOGAG00000026969 PTP4A2 (ENSOGAG00000029603) SPOCD1 (ENSOGAG00000016702) ADGRB2 (ENSOGAG00000006787) COL16A1 (ENSOGAG00000004599) PEF1 (ENSOGAG00000004597) HCRTR1 (ENSOGAG00000004595) TINAGL1 (ENSOGAG00000004594) SERINC2 (ENSOGAG00000013759) PGAM1 (ENSOGAG00000027180) ##22 FABP3 (ENSOGAG00000013757) ZCCHC17 (ENSOGAG00000013749) ENSOGAG00000004538 NKAIN1 (ENSOGAG00000004537) PUM1 (ENSOGAG00000011063) SDC3 (ENSOGAG00000031276) ENSOGAG00000033118 LAPTM5 (ENSOGAG00000014958) MATN1 (ENSOGAG00000014950) PTPRU (ENSOGAG00000015523) MECR (ENSOGAG00000015520) SRSF4 (ENSOGAG00000015515) TMEM200B (ENSOGAG00000025912) EPB41 (ENSOGAG00000001603) ENSOGAG00000025718 Lemuriformes ANCESTRAL SPECIES 7 ENSGT00940000164312 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Mouse lemur MODERN SPECIES 6 TCTN3 (ENSMICG00000015970) ENTPD1 (ENSMICG00000001557) CC2D2B (ENSMICG00000010857) CCNJ (ENSMICG00000037344) BLNK (ENSMICG00000010724) DNTT (ENSMICG00000010732) OPALIN (ENSMICG00000010737) TLL2 (ENSMICG00000044745) TM9SF3 (ENSMICG00000010764) PIK3AP1 (ENSMICG00000010774) ENSMICG00000028726 LCOR (ENSMICG00000007572) SLIT1 (ENSMICG00000007587) ARHGAP19 (ENSMICG00000028625) RRP12 (ENSMICG00000007624) PGAM1 (ENSMICG00000007657) ##22 EXOSC1 (ENSMICG00000007664) ZDHHC16 (ENSMICG00000007671) MMS19 (ENSMICG00000007678) UBTD1 (ENSMICG00000048128) ANKRD2 (ENSMICG00000007695) PI4K2A (ENSMICG00000007703) C10orf62 (ENSMICG00000007711) MORN4 (ENSMICG00000047547) AVPI1 (ENSMICG00000030042) ZFYVE27 (ENSMICG00000000197) SFRP5 (ENSMICG00000044070) GOLGA7B (ENSMICG00000000199) CRTAC1 (ENSMICG00000000201) R3HCC1L (ENSMICG00000000208) LOXL4 (ENSMICG00000000209) Lemuriformes_a ANCESTRAL SPECIES 21 ENSGT00940000164312 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Coquerels sifaka MODERN SPECIES 592 ENTPD1 (ENSPCOG00000024914) ENSPCOG00000000546 ENSPCOG00000028681 ENSPCOG00000022671 CCNJ (ENSPCOG00000020585) BLNK (ENSPCOG00000024376) DNTT (ENSPCOG00000027142) OPALIN (ENSPCOG00000003690) TLL2 (ENSPCOG00000025513) TM9SF3 (ENSPCOG00000018190) PIK3AP1 (ENSPCOG00000016804) LCOR (ENSPCOG00000017788) SLIT1 (ENSPCOG00000028603) ARHGAP19 (ENSPCOG00000015366) RRP12 (ENSPCOG00000014009) PGAM1 (ENSPCOG00000016118) ##22 EXOSC1 (ENSPCOG00000027539) ZDHHC16 (ENSPCOG00000027800) MMS19 (ENSPCOG00000013373) UBTD1 (ENSPCOG00000020849) ANKRD2 (ENSPCOG00000022155) C10orf62 (ENSPCOG00000003877) HOGA1 (ENSPCOG00000026545) MORN4 (ENSPCOG00000015266) PI4K2A (ENSPCOG00000014965) AVPI1 (ENSPCOG00000021859) ZFYVE27 (ENSPCOG00000027569) SFRP5 (ENSPCOG00000020059) GOLGA7B (ENSPCOG00000014287) CRTAC1 (ENSPCOG00000002194) Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 771 VMA21 (ENSPSMG00000013387) GPR50 (ENSPSMG00000013398) ENSPSMG00000013407 ##22 ENSPSMG00000013417 CD99L2 (ENSPSMG00000013439) MTMR1 (ENSPSMG00000013485) MTM1 (ENSPSMG00000013504) MAMLD1 (ENSPSMG00000013530) Greater bamboo lemur MODERN SPECIES 968 DNTT (ENSPSMG00000007016) OPALIN (ENSPSMG00000007053) TLL2 (ENSPSMG00000007085) TM9SF3 (ENSPSMG00000007155) PIK3AP1 (ENSPSMG00000007273) ENSPSMG00000007301 ENSPSMG00000007305 LCOR (ENSPSMG00000007345) SLIT1 (ENSPSMG00000007534) ARHGAP19 (ENSPSMG00000007657) FRAT1 (ENSPSMG00000007672) RRP12 (ENSPSMG00000007959) PGAM1 (ENSPSMG00000008048) ##22 EXOSC1 (ENSPSMG00000008122) ZDHHC16 (ENSPSMG00000008385) MMS19 (ENSPSMG00000008890) UBTD1 (ENSPSMG00000008967) ANKRD2 (ENSPSMG00000008988) HOGA1 (ENSPSMG00000009007) MORN4 (ENSPSMG00000009044) PI4K2A (ENSPSMG00000009062) AVPI1 (ENSPSMG00000009076) MARVELD1 (ENSPSMG00000009082) ZFYVE27 (ENSPSMG00000009295) SFRP5 (ENSPSMG00000009435) GOLGA7B (ENSPSMG00000009462) CRTAC1 (ENSPSMG00000009508) R3HCC1L (ENSPSMG00000009613) Haplorrhini ANCESTRAL SPECIES 11 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Tarsier MODERN SPECIES 5187 PGAM1 (ENSTSYG00000032510) ##22 EXOSC1 (ENSTSYG00000000760) ZDHHC16 (ENSTSYG00000037429) MMS19 (ENSTSYG00000001157) UBTD1 (ENSTSYG00000033392) ANKRD2 (ENSTSYG00000028913) MORN4 (ENSTSYG00000033396) HOGA1 (ENSTSYG00000009082) AVPI1 (ENSTSYG00000027280) Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Sooty mangabey MODERN SPECIES 542 DNAJC27 (ENSCATG00000029231) ENSCATG00000028816 ADCY3 (ENSCATG00000006719) CENPO (ENSCATG00000035791) PTRHD1 (ENSCATG00000033690) NCOA1 (ENSCATG00000035964) ITSN2 (ENSCATG00000017804) PFN4 (ENSCATG00000032266) TP53I3 (ENSCATG00000040448) SF3B6 (ENSCATG00000030936) FKBP1B (ENSCATG00000016638) WDCP (ENSCATG00000030463) MFSD2B (ENSCATG00000040488) UBXN2A (ENSCATG00000007176) ATAD2B (ENSCATG00000035587) ENSCATG00000036009 ##22 KLHL29 (ENSCATG00000037112) TDRD15 (ENSCATG00000014633) APOB (ENSCATG00000025709) LDAH (ENSCATG00000025214) GDF7 (ENSCATG00000015865) HS1BP3 (ENSCATG00000038867) ENSCATG00000037321 RHOB (ENSCATG00000021066) PUM2 (ENSCATG00000043826) ENSCATG00000041330 SDC1 (ENSCATG00000044796) LAPTM4A (ENSCATG00000036860) MATN3 (ENSCATG00000038685) WDR35 (ENSCATG00000043847) TTC32 (ENSCATG00000043877) Vervet Monkey MODERN SPECIES MRE11 (ENSCSAG00000003391) GPR83 (ENSCSAG00000003397) IZUMO1R (ENSCSAG00000003400) PANX1 (ENSCSAG00000003406) HEPHL1 (ENSCSAG00000003418) VSTM5 (ENSCSAG00000003423) MED17 (ENSCSAG00000003426) C11orf54 (ENSCSAG00000003429) TAF1D (ENSCSAG00000003431) CEP295 (ENSCSAG00000003445) ENSCSAG00000003461 SMCO4 (ENSCSAG00000000608) DEUP1 (ENSCSAG00000003465) SLC36A4 (ENSCSAG00000003469) MTNR1B (ENSCSAG00000003473) ENSCSAG00000003478 ##22 FAT3 (ENSCSAG00000003512) ENSCSAG00000000609 CHORDC1 (ENSCSAG00000003537) NAALAD2 (ENSCSAG00000003546) ENSCSAG00000003550 ENSCSAG00000003560 ENSCSAG00000003564 ENSCSAG00000003569 ENSCSAG00000003571 ENSCSAG00000003574 ENSCSAG00000003576 ENSCSAG00000003583 TRIM77 (ENSCSAG00000003587) FOLH1 (ENSCSAG00000003592) NOX4 (ENSCSAG00000003604) Platyrrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.a ##22 Cebidae_a ANCESTRAL SPECIES 46 ENSGT00940000157133 ENSGT00940000156549.a.a ENSGT00390000016702 ENSGT00500000044959 ENSGT00950000183021.b ENSGT00940000155936.b ENSGT00530000064185.b ENSGT00530000064185.a ENSGT00390000017067 ENSGT00940000161217 ENSGT00390000005908 ENSGT00940000153311.a.b.b ENSGT00390000001660 ENSGT00390000005318.b.b.a ENSGT00520000055567.a.b ENSGT00950000182926.b.d.c.a.g.a ##22 ENSGT00550000074694.b ENSGT00940000158824 ENSGT00590000083139 ENSGT00390000009688 ENSGT00940000160140.b ENSGT00390000013092 ENSGT00900000143745 ENSGT00950000182945.b.a.a.b.b.b ENSGT00940000157575 ENSGT00940000161171 ENSGT00940000153446.b ENSGT00940000157581 ENSGT00940000155745 ENSGT00390000011905.n.a ENSGT00940000158993 Capuchin MODERN SPECIES 1 ADCY3 (ENSCCAG00000021802) CENPO (ENSCCAG00000026815) PTRHD1 (ENSCCAG00000033856) NCOA1 (ENSCCAG00000023754) ITSN2 (ENSCCAG00000006141) FAM228A (ENSCCAG00000029149) FAM228B (ENSCCAG00000033095) PFN4 (ENSCCAG00000028499) TP53I3 (ENSCCAG00000032310) SF3B6 (ENSCCAG00000036653) FKBP1B (ENSCCAG00000003872) WDCP (ENSCCAG00000035342) MFSD2B (ENSCCAG00000026318) UBXN2A (ENSCCAG00000025921) ENSCCAG00000021209 ENSCCAG00000025817 ##22 ATAD2B (ENSCCAG00000031116) KLHL29 (ENSCCAG00000036850) APOB (ENSCCAG00000021140) LDAH (ENSCCAG00000033829) GDF7 (ENSCCAG00000035529) HS1BP3 (ENSCCAG00000028038) RHOB (ENSCCAG00000018485) PUM2 (ENSCCAG00000037035) SDC1 (ENSCCAG00000031573) ENSCCAG00000019764 LAPTM4A (ENSCCAG00000029231) MATN3 (ENSCCAG00000033118) WDR35 (ENSCCAG00000030486) TTC32 (ENSCCAG00000025284) OSR1 (ENSCCAG00000029161) Bolivian squirrel monkey MODERN SPECIES 113 ADCY3 (ENSSBOG00000022082) ENSSBOG00000007440 CENPO (ENSSBOG00000023221) PTRHD1 (ENSSBOG00000031751) NCOA1 (ENSSBOG00000030979) ITSN2 (ENSSBOG00000034128) FAM228B (ENSSBOG00000021849) PFN4 (ENSSBOG00000030872) ENSSBOG00000029308 TP53I3 (ENSSBOG00000036061) SF3B6 (ENSSBOG00000002914) FKBP1B (ENSSBOG00000020385) ENSSBOG00000029165 MFSD2B (ENSSBOG00000022320) UBXN2A (ENSSBOG00000023884) ENSSBOG00000031186 ##22 ATAD2B (ENSSBOG00000032583) KLHL29 (ENSSBOG00000021000) APOB (ENSSBOG00000008834) LDAH (ENSSBOG00000031409) GDF7 (ENSSBOG00000022327) HS1BP3 (ENSSBOG00000023433) ENSSBOG00000032320 RHOB (ENSSBOG00000013056) PUM2 (ENSSBOG00000022007) ENSSBOG00000029288 LAPTM4A (ENSSBOG00000031549) MATN3 (ENSSBOG00000027840) WDR35 (ENSSBOG00000030509) TTC32 (ENSSBOG00000024543) OSR1 (ENSSBOG00000023175) Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.g.b ##22 Capuchin MODERN SPECIES 222 ENSCCAG00000016654 ANAPC1 (ENSCCAG00000024583) MERTK (ENSCCAG00000026739) TMEM87B (ENSCCAG00000031687) FBLN7 (ENSCCAG00000031423) ENSCCAG00000019771 ENSCCAG00000019984 ENSCCAG00000037584 TTL (ENSCCAG00000029632) POLR1B (ENSCCAG00000035252) CHCHD5 (ENSCCAG00000032057) SLC20A1 (ENSCCAG00000030266) CKAP2L (ENSCCAG00000002489) IL1A (ENSCCAG00000035876) IL1B (ENSCCAG00000029540) ENSCCAG00000022621 ##22 IL37 (ENSCCAG00000009572) IL36G (ENSCCAG00000028396) IL36A (ENSCCAG00000021339) ENSCCAG00000025542 IL36RN (ENSCCAG00000028001) IL1F10 (ENSCCAG00000024612) IL1RN (ENSCCAG00000035464) PSD4 (ENSCCAG00000016527) ENSCCAG00000037861 ENSCCAG00000007334 ENSCCAG00000004297 ENSCCAG00000004138 ENSCCAG00000012962 ENSCCAG00000037640 ENSCCAG00000000703 Simiiformes ANCESTRAL SPECIES 17 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Catarrhini ANCESTRAL SPECIES 18 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493.b.a ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 Gibbon DUPLICATION Gibbon MODERN SPECIES 18 ENSNLEG00000034181 ADGRB3 (ENSNLEG00000000505) LMBRD1 (ENSNLEG00000000524) ENSNLEG00000034891 COL19A1 (ENSNLEG00000000613) COL9A1 (ENSNLEG00000000726) FAM135A (ENSNLEG00000000844) SDHAF4 (ENSNLEG00000036240) SMAP1 (ENSNLEG00000000922) B3GAT2 (ENSNLEG00000000971) OGFRL1 (ENSNLEG00000029017) ENSNLEG00000031051 RIMS1 (ENSNLEG00000001000) ENSNLEG00000033063 ENSNLEG00000028596 ENSNLEG00000031152 ##22 KCNQ5 (ENSNLEG00000001127) ENSNLEG00000001177 KHDC1L (ENSNLEG00000001179) ENSNLEG00000029407 ENSNLEG00000001183 DPPA5 (ENSNLEG00000001195) KHDC3L (ENSNLEG00000001200) OOEP (ENSNLEG00000001204) DDX43 (ENSNLEG00000001209) CGAS (ENSNLEG00000001281) MTO1 (ENSNLEG00000001308) ENSNLEG00000035164 SLC17A5 (ENSNLEG00000004778) CD109 (ENSNLEG00000004794) COL12A1 (ENSNLEG00000004898) Gibbon MODERN SPECIES 18 ENSNLEG00000036067 ENTPD1 (ENSNLEG00000013187) ENSNLEG00000013275 CCNJ (ENSNLEG00000013305) BLNK (ENSNLEG00000013324) DNTT (ENSNLEG00000013361) OPALIN (ENSNLEG00000013398) TLL2 (ENSNLEG00000013436) ENSNLEG00000013527 PIK3AP1 (ENSNLEG00000013605) LCOR (ENSNLEG00000019109) SLIT1 (ENSNLEG00000013653) ARHGAP19 (ENSNLEG00000013723) FRAT2 (ENSNLEG00000019110) RRP12 (ENSNLEG00000013762) PGAM1 (ENSNLEG00000013804) ##22 EXOSC1 (ENSNLEG00000013872) ZDHHC16 (ENSNLEG00000013895) MMS19 (ENSNLEG00000013996) UBTD1 (ENSNLEG00000014204) ANKRD2 (ENSNLEG00000014209) MORN4 (ENSNLEG00000014248) PI4K2A (ENSNLEG00000014236) AVPI1 (ENSNLEG00000014255) ZFYVE27 (ENSNLEG00000014267) SFRP5 (ENSNLEG00000014325) GOLGA7B (ENSNLEG00000014326) ENSNLEG00000035121 CRTAC1 (ENSNLEG00000014328) R3HCC1L (ENSNLEG00000014364) LOXL4 (ENSNLEG00000014379) Hominidae ANCESTRAL SPECIES 13 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493.a ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 Orangutan MODERN SPECIES 1 CC2D2B (ENSPPYG00000002514) CCNJ (ENSPPYG00000038652) BLNK (ENSPPYG00000002517) DNTT (ENSPPYG00000002518) OPALIN (ENSPPYG00000002519) TLL2 (ENSPPYG00000002520) TM9SF3 (ENSPPYG00000002521) PIK3AP1 (ENSPPYG00000002522) ENSPPYG00000030129 C10H10orf12 (ENSPPYG00000002523) SLIT1 (ENSPPYG00000002525) ENSPPYG00000035381 ARHGAP19 (ENSPPYG00000002526) ENSPPYG00000034095 RRP12 (ENSPPYG00000002528) PGAM1 (ENSPPYG00000002530) ##22 EXOSC1 (ENSPPYG00000002531) ZDHHC16 (ENSPPYG00000002532) MMS19 (ENSPPYG00000002533) UBTD1 (ENSPPYG00000002534) ANKRD2 (ENSPPYG00000002535) HOGA1 (ENSPPYG00000002536) MORN4 (ENSPPYG00000031901) PI4K2A (ENSPPYG00000002538) AVPI1 (ENSPPYG00000002539) MARVELD1 (ENSPPYG00000038510) ZFYVE27 (ENSPPYG00000002540) SFRP5 (ENSPPYG00000034062) GOLGA7B (ENSPPYG00000002542) CRTAC1 (ENSPPYG00000002543) R3HCC1L (ENSPPYG00000002545) Homo/Pan/Gorilla group ANCESTRAL SPECIES 17 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493.b.a ENSGT00390000008787.b ENSGT00550000076264 ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 Gorilla DUPLICATION Gorilla MODERN SPECIES 19 ADGRB3 (ENSGGOG00000015587) LMBRD1 (ENSGGOG00000014341) ENSGGOG00000021992 ENSGGOG00000005906 COL9A1 (ENSGGOG00000010221) FAM135A (ENSGGOG00000004791) SDHAF4 (ENSGGOG00000037113) ENSGGOG00000040766 SMAP1 (ENSGGOG00000011243) B3GAT2 (ENSGGOG00000021933) OGFRL1 (ENSGGOG00000010724) RIMS1 (ENSGGOG00000003628) ENSGGOG00000040624 KCNQ5 (ENSGGOG00000011406) ENSGGOG00000038380 ENSGGOG00000038734 ##22 ENSGGOG00000043309 KHDC1L (ENSGGOG00000025471) ENSGGOG00000006894 ENSGGOG00000038983 ENSGGOG00000041551 DPPA5 (ENSGGOG00000012001) KHDC3L (ENSGGOG00000007778) OOEP (ENSGGOG00000016832) DDX43 (ENSGGOG00000016092) CGAS (ENSGGOG00000010774) ENSGGOG00000038471 ENSGGOG00000041490 ENSGGOG00000025675 SLC17A5 (ENSGGOG00000002667) CD109 (ENSGGOG00000004082) Gorilla MODERN SPECIES 3 CEP83 (ENSGGOG00000026256) ENSGGOG00000028247 ENSGGOG00000036546 ENSGGOG00000028504 SUCLG2 (ENSGGOG00000038911) TMCC3 (ENSGGOG00000007536) NDUFA12 (ENSGGOG00000012880) NR2C1 (ENSGGOG00000012884) FGD6 (ENSGGOG00000012410) VEZT (ENSGGOG00000001896) ENSGGOG00000037312 ENSGGOG00000028193 METAP2 (ENSGGOG00000008696) USP44 (ENSGGOG00000008702) NTN4 (ENSGGOG00000013684) ENSGGOG00000003096 ##22 ENSGGOG00000001127 CCDC38 (ENSGGOG00000008870) AMDHD1 (ENSGGOG00000006854) HAL (ENSGGOG00000006865) LTA4H (ENSGGOG00000006881) ELK3 (ENSGGOG00000009227) CDK17 (ENSGGOG00000001172) CFAP54 (ENSGGOG00000008490) NEDD1 (ENSGGOG00000010743) ENSGGOG00000039481 ENSGGOG00000003388 SLC25A3 (ENSGGOG00000015886) IKBIP (ENSGGOG00000008397) APAF1 (ENSGGOG00000008401) ANKS1B (ENSGGOG00000008413) Gorilla MODERN SPECIES 1 ENSGGOG00000007015 CCNJ (ENSGGOG00000006034) ZNF518A (ENSGGOG00000017106) BLNK (ENSGGOG00000001032) DNTT (ENSGGOG00000001035) OPALIN (ENSGGOG00000000901) TLL2 (ENSGGOG00000015595) TM9SF3 (ENSGGOG00000015606) PIK3AP1 (ENSGGOG00000015613) ENSGGOG00000026025 LCOR (ENSGGOG00000005550) SLIT1 (ENSGGOG00000005553) ARHGAP19 (ENSGGOG00000006319) FRAT1 (ENSGGOG00000036954) RRP12 (ENSGGOG00000014850) PGAM1 (ENSGGOG00000028602) ##22 EXOSC1 (ENSGGOG00000003099) ENSGGOG00000003105 ENSGGOG00000026594 MMS19 (ENSGGOG00000003110) UBTD1 (ENSGGOG00000015224) ANKRD2 (ENSGGOG00000015227) PI4K2A (ENSGGOG00000015247) MORN4 (ENSGGOG00000015242) AVPI1 (ENSGGOG00000015256) MARVELD1 (ENSGGOG00000027335) ZFYVE27 (ENSGGOG00000024663) SFRP5 (ENSGGOG00000012574) GOLGA7B (ENSGGOG00000016005) CRTAC1 (ENSGGOG00000016011) ENSGGOG00000041605 Homo/Pan group ANCESTRAL SPECIES 18 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493.a ENSGT00390000008787.b ENSGT00550000076264 ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 Human MODERN SPECIES 1 CC2D2B (ENSG00000188649) CCNJ (ENSG00000107443) ZNF518A (ENSG00000177853) BLNK (ENSG00000095585) DNTT (ENSG00000107447) OPALIN (ENSG00000197430) TLL2 (ENSG00000095587) TM9SF3 (ENSG00000077147) PIK3AP1 (ENSG00000155629) LCOR (ENSG00000196233) SLIT1 (ENSG00000187122) ARHGAP19 (ENSG00000213390) FRAT1 (ENSG00000165879) FRAT2 (ENSG00000181274) RRP12 (ENSG00000052749) PGAM1 (ENSG00000171314) ##22 EXOSC1 (ENSG00000171311) ZDHHC16 (ENSG00000171307) MMS19 (ENSG00000155229) UBTD1 (ENSG00000165886) ANKRD2 (ENSG00000165887) HOGA1 (ENSG00000241935) ENSG00000249967 C10orf62 (ENSG00000203942) MORN4 (ENSG00000171160) PI4K2A (ENSG00000155252) AVPI1 (ENSG00000119986) MARVELD1 (ENSG00000155254) ZFYVE27 (ENSG00000155256) SFRP5 (ENSG00000120057) GOLGA7B (ENSG00000155265) Pan ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493.b.a ENSGT00390000008787.b ENSGT00550000076264 ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000010434.b ENSGT00730000111173 ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 ENSGT00390000013726 ENSGT00530000063711.b Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 19 ADGRB3 (ENSPTRG00000018325) LMBRD1 (ENSPTRG00000018326) ENSPTRG00000044889 COL19A1 (ENSPTRG00000018327) COL9A1 (ENSPTRG00000018329) FAM135A (ENSPTRG00000018330) SDHAF4 (ENSPTRG00000018331) ENSPTRG00000050587 SMAP1 (ENSPTRG00000018333) B3GAT2 (ENSPTRG00000018334) ENSPTRG00000039066 OGFRL1 (ENSPTRG00000018335) RIMS1 (ENSPTRG00000051415) ENSPTRG00000046439 KCNQ5 (ENSPTRG00000018339) ENSPTRG00000048515 ##22 ENSPTRG00000018341 KHDC1L (ENSPTRG00000052071) ENSPTRG00000051619 ENSPTRG00000049430 DPPA5 (ENSPTRG00000029547) KHDC3L (ENSPTRG00000029546) OOEP (ENSPTRG00000029545) DDX43 (ENSPTRG00000018344) CGAS (ENSPTRG00000018345) MTO1 (ENSPTRG00000048593) EEF1A1 (ENSPTRG00000018347) SLC17A5 (ENSPTRG00000018348) CD109 (ENSPTRG00000018349) ENSPTRG00000052684 COL12A1 (ENSPTRG00000018351) Chimpanzee MODERN SPECIES 3 ENSPTRG00000047060 PLXNC1 (ENSPTRG00000005301) CEP83 (ENSPTRG00000005302) ENSPTRG00000049511 TMCC3 (ENSPTRG00000005304) NDUFA12 (ENSPTRG00000005306) NR2C1 (ENSPTRG00000005307) FGD6 (ENSPTRG00000005309) ENSPTRG00000043616 VEZT (ENSPTRG00000005312) ENSPTRG00000045308 ENSPTRG00000044514 METAP2 (ENSPTRG00000005313) USP44 (ENSPTRG00000005314) NTN4 (ENSPTRG00000005315) ENSPTRG00000049896 ##22 SNRPF (ENSPTRG00000005317) CCDC38 (ENSPTRG00000005318) AMDHD1 (ENSPTRG00000005319) HAL (ENSPTRG00000005320) LTA4H (ENSPTRG00000005321) ELK3 (ENSPTRG00000005322) CDK17 (ENSPTRG00000005323) ENSPTRG00000046831 CFAP54 (ENSPTRG00000005326) NEDD1 (ENSPTRG00000005329) ENSPTRG00000039568 TMPO (ENSPTRG00000005331) SLC25A3 (ENSPTRG00000005333) ENSPTRG00000005334 APAF1 (ENSPTRG00000005335) Chimpanzee MODERN SPECIES 1 CCNJ (ENSPTRG00000002790) ZNF518A (ENSPTRG00000043182) BLNK (ENSPTRG00000002792) DNTT (ENSPTRG00000002793) OPALIN (ENSPTRG00000022887) TLL2 (ENSPTRG00000002795) TM9SF3 (ENSPTRG00000002797) PIK3AP1 (ENSPTRG00000002798) LCOR (ENSPTRG00000002801) ENSPTRG00000052704 SLIT1 (ENSPTRG00000033956) ARHGAP19 (ENSPTRG00000047078) FRAT1 (ENSPTRG00000051237) FRAT2 (ENSPTRG00000002805) RRP12 (ENSPTRG00000002806) PGAM1 (ENSPTRG00000002807) ##22 EXOSC1 (ENSPTRG00000002808) ZDHHC16 (ENSPTRG00000002809) MMS19 (ENSPTRG00000002810) UBTD1 (ENSPTRG00000002811) ANKRD2 (ENSPTRG00000002812) PI4K2A (ENSPTRG00000002815) MORN4 (ENSPTRG00000045678) AVPI1 (ENSPTRG00000002816) MARVELD1 (ENSPTRG00000051550) ZFYVE27 (ENSPTRG00000002818) SFRP5 (ENSPTRG00000045244) GOLGA7B (ENSPTRG00000045507) CRTAC1 (ENSPTRG00000002821) ENSPTRG00000042728 R3HCC1L (ENSPTRG00000002822) Bonobo DUPLICATION Bonobo MODERN SPECIES 19 ADGRB3 (ENSPPAG00000037212) LMBRD1 (ENSPPAG00000032391) ENSPPAG00000028836 COL19A1 (ENSPPAG00000040447) COL9A1 (ENSPPAG00000036128) FAM135A (ENSPPAG00000034229) SDHAF4 (ENSPPAG00000032082) ENSPPAG00000032234 SMAP1 (ENSPPAG00000036070) ENSPPAG00000032375 ENSPPAG00000041570 OGFRL1 (ENSPPAG00000043342) RIMS1 (ENSPPAG00000040646) ENSPPAG00000034250 KCNQ5 (ENSPPAG00000040956) ENSPPAG00000038149 ##22 ENSPPAG00000041906 KHDC1L (ENSPPAG00000025424) ENSPPAG00000043529 ENSPPAG00000039320 DPPA5 (ENSPPAG00000035257) KHDC3L (ENSPPAG00000043830) OOEP (ENSPPAG00000037341) DDX43 (ENSPPAG00000034199) CGAS (ENSPPAG00000028648) MTO1 (ENSPPAG00000028710) EEF1A1 (ENSPPAG00000038736) SLC17A5 (ENSPPAG00000026527) CD109 (ENSPPAG00000029267) ENSPPAG00000043602 COL12A1 (ENSPPAG00000044050) Bonobo MODERN SPECIES 1 TCTN3 (ENSPPAG00000043730) ENTPD1 (ENSPPAG00000033911) ENSPPAG00000038503 CCNJ (ENSPPAG00000039585) BLNK (ENSPPAG00000040349) DNTT (ENSPPAG00000040802) ENSPPAG00000041321 TLL2 (ENSPPAG00000040475) TM9SF3 (ENSPPAG00000042084) PIK3AP1 (ENSPPAG00000042299) ENSPPAG00000001131 LCOR (ENSPPAG00000024948) SLIT1 (ENSPPAG00000023312) ARHGAP19 (ENSPPAG00000027208) RRP12 (ENSPPAG00000043885) PGAM1 (ENSPPAG00000028548) ##22 EXOSC1 (ENSPPAG00000039842) ZDHHC16 (ENSPPAG00000030292) MMS19 (ENSPPAG00000044031) UBTD1 (ENSPPAG00000041666) ANKRD2 (ENSPPAG00000034743) ENSPPAG00000025810 ENSPPAG00000030161 AVPI1 (ENSPPAG00000033222) ZFYVE27 (ENSPPAG00000029291) SFRP5 (ENSPPAG00000031585) GOLGA7B (ENSPPAG00000040315) CRTAC1 (ENSPPAG00000042754) ENSPPAG00000031192 R3HCC1L (ENSPPAG00000039950) LOXL4 (ENSPPAG00000030338) Bonobo MODERN SPECIES 18 ENSPPAG00000030177 ADAMTS12 (ENSPPAG00000037028) RXFP3 (ENSPPAG00000012921) SLC45A2 (ENSPPAG00000006580) AMACR (ENSPPAG00000043217) RAI14 (ENSPPAG00000039153) ENSPPAG00000033122 RAD1 (ENSPPAG00000028406) BRIX1 (ENSPPAG00000038183) DNAJC21 (ENSPPAG00000042627) AGXT2 (ENSPPAG00000035314) PRLR (ENSPPAG00000043899) ENSPPAG00000037233 IL7R (ENSPPAG00000039723) CAPSL (ENSPPAG00000019420) ENSPPAG00000004829 ##22 ENSPPAG00000040298 ENSPPAG00000039004 ENSPPAG00000031288 LMBRD2 (ENSPPAG00000029193) SKP2 (ENSPPAG00000026467) ENSPPAG00000036531 RANBP3L (ENSPPAG00000031849) SLC1A3 (ENSPPAG00000032856) NIPBL (ENSPPAG00000038200) ENSPPAG00000039740 ENSPPAG00000032480 CPLANE1 (ENSPPAG00000036782) NUP155 (ENSPPAG00000043867) ENSPPAG00000000687 ENSPPAG00000030132 Cercopithecidae DUPLICATION Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.a ##22 Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000154368.l ENSGT00940000156675 ENSGT00390000017639 ENSGT00940000155309.f ENSGT00940000154445.e.a ENSGT00940000155109.b ENSGT00440000039001 ENSGT00940000156276 ENSGT00940000155426.t ENSGT00390000014563.a.b ENSGT00950000183033.a.a.d ENSGT00940000154185.l.a.b ENSGT00940000156416 ENSGT01030000235256 ENSGT00390000013594 ENSGT00950000182926.b.d.c.a.h.l.a ##22 ENSGT00940000154939 ENSGT00940000153335.a.b.y.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.t.a ENSGT00940000158210 ENSGT00950000182810.B.a.x.b.b ENSGT00940000158794 Cercopithecinae_b ANCESTRAL SPECIES 14 ENSGT00910000147615 ENSGT00940000154368.l ENSGT00940000156675 ENSGT00390000017639 ENSGT00940000155309.f ENSGT00940000154445.e.a ENSGT00940000155109.b ENSGT00440000039001 ENSGT00940000156276 ENSGT00390000014563.a.b ENSGT00950000183033.a.a.d ENSGT00940000154185.l.a.b ENSGT00940000156416 ENSGT01030000235256 ENSGT00390000013594 ENSGT00950000182926.b.d.c.a.h.l.a ##22 ENSGT00940000154939 ENSGT00940000153335.a.b.y.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.t.a ENSGT00940000165721 ENSGT00940000158210 ENSGT00950000182810.B.a.x.b.b Cercopithecinae_d ANCESTRAL SPECIES 143 ENSGT00940000156675 ENSGT00390000017639 ENSGT01100000263525.b.b.a.d ENSGT00940000155309.f ENSGT00940000154445.e.a ENSGT00940000155109.b ENSGT00440000039001 ENSGT00940000156276 ENSGT00950000183079.B.c ENSGT00390000014563.a.b ENSGT00950000183033.a.a.d ENSGT00940000154185.l.a.b ENSGT00940000156416 ENSGT01030000235256 ENSGT00390000013594 ENSGT00950000182926.b.d.c.a.h.l.a ##22 ENSGT00940000154939 ENSGT00940000153335.a.b.y.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.t.b ENSGT00940000165721 ENSGT00940000158210 ENSGT00950000182810.B.a.x.b.b Sooty mangabey MODERN SPECIES 595 PCDH15 (ENSCATG00000044325) ZWINT (ENSCATG00000044437) ENSCATG00000022893 IPMK (ENSCATG00000026842) CISD1 (ENSCATG00000030948) UBE2D1 (ENSCATG00000006141) TFAM (ENSCATG00000027920) BICC1 (ENSCATG00000016603) ENSCATG00000030400 PHYHIPL (ENSCATG00000037368) FAM13C (ENSCATG00000032373) ENSCATG00000034993 SLC16A9 (ENSCATG00000013976) CCDC6 (ENSCATG00000033448) ENSCATG00000045201 ##22 ANK3 (ENSCATG00000039015) ENSCATG00000038329 RHOBTB1 (ENSCATG00000042026) TMEM26 (ENSCATG00000043914) CABCOCO1 (ENSCATG00000014612) ARID5B (ENSCATG00000035614) RTKN2 (ENSCATG00000043432) ZNF365 (ENSCATG00000030610) ENSCATG00000036398 ADO (ENSCATG00000016498) EGR2 (ENSCATG00000036150) ENSCATG00000033855 ENSCATG00000030709 ENSCATG00000033326 JMJD1C (ENSCATG00000040124) Macaca ANCESTRAL SPECIES 11 ENSGT00940000154368.l ENSGT00940000156675 ENSGT00390000017639 ENSGT00940000155309.f ENSGT00940000154445.e.a ENSGT00940000155109.b ENSGT00440000039001 ENSGT00940000156276 ENSGT00940000155426.t ENSGT00390000014563.a.b ENSGT00950000183033.a.a.d ENSGT00940000154185.l.a.b ENSGT00940000156416 ENSGT01030000235256 ENSGT00390000013594 ENSGT00950000182926.b.d.c.a.h.l.a ##22 ENSGT00940000154939 ENSGT00940000153335.a.b.y.a ENSGT00940000159995 ENSGT00390000014794.b ENSGT00390000004181 ENSGT00940000161078 ENSGT00940000157470 ENSGT00530000063713.a ENSGT00510000055172 ENSGT00390000014082.b ENSGT00940000158394 ENSGT00390000000984.t.a ENSGT00940000158210 ENSGT00950000182810.B.a.x.b.b ENSGT00940000158794 Pig-tailed macaque MODERN SPECIES 353 IPMK (ENSMNEG00000033112) CISD1 (ENSMNEG00000039390) UBE2D1 (ENSMNEG00000040023) TFAM (ENSMNEG00000030206) BICC1 (ENSMNEG00000009601) ENSMNEG00000030319 PHYHIPL (ENSMNEG00000035222) FAM13C (ENSMNEG00000044679) ENSMNEG00000031580 SLC16A9 (ENSMNEG00000029664) MRLN (ENSMNEG00000014934) CCDC6 (ENSMNEG00000030697) ENSMNEG00000029490 ##22 ENSMNEG00000044750 ANK3 (ENSMNEG00000034594) CDK1 (ENSMNEG00000043947) RHOBTB1 (ENSMNEG00000042613) TMEM26 (ENSMNEG00000038130) CABCOCO1 (ENSMNEG00000031430) ARID5B (ENSMNEG00000041462) RTKN2 (ENSMNEG00000044923) ZNF365 (ENSMNEG00000030489) ENSMNEG00000033048 ADO (ENSMNEG00000028166) EGR2 (ENSMNEG00000042085) NRBF2 (ENSMNEG00000025366) ENSMNEG00000043648 ENSMNEG00000029188 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.b ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.b ##22 Black snub-nosed monkey MODERN SPECIES 3294 ENSRBIG00000037169 ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.b ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.b ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.h.l.b ##22 Sooty mangabey MODERN SPECIES 406 PLXNC1 (ENSCATG00000044596) CEP83 (ENSCATG00000042979) ENSCATG00000021201 ENSCATG00000034695 TMCC3 (ENSCATG00000025807) ENSCATG00000041283 NDUFA12 (ENSCATG00000002834) NR2C1 (ENSCATG00000030438) ENSCATG00000037021 FGD6 (ENSCATG00000008001) ENSCATG00000041076 ENSCATG00000041454 VEZT (ENSCATG00000043374) METAP2 (ENSCATG00000043908) USP44 (ENSCATG00000035851) ENSCATG00000044202 ##22 NTN4 (ENSCATG00000006259) ENSCATG00000003132 CCDC38 (ENSCATG00000041407) AMDHD1 (ENSCATG00000043814) HAL (ENSCATG00000016653) LTA4H (ENSCATG00000043659) ELK3 (ENSCATG00000035761) CDK17 (ENSCATG00000008799) CFAP54 (ENSCATG00000040097) NEDD1 (ENSCATG00000040561) ENSCATG00000035402 ENSCATG00000037155 SLC25A3 (ENSCATG00000042696) IKBIP (ENSCATG00000039722) APAF1 (ENSCATG00000042930) Cercopithecidae ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 ENSGT00390000013726 Rhinopithecus ANCESTRAL SPECIES 11 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000010434.b ENSGT00730000111173 ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Black snub-nosed monkey MODERN SPECIES 78 ZNF518A (ENSRBIG00000029224) BLNK (ENSRBIG00000044422) DNTT (ENSRBIG00000044322) OPALIN (ENSRBIG00000036919) TLL2 (ENSRBIG00000030223) TM9SF3 (ENSRBIG00000010642) PIK3AP1 (ENSRBIG00000037363) LCOR (ENSRBIG00000000077) SLIT1 (ENSRBIG00000040022) ARHGAP19 (ENSRBIG00000036845) FRAT1 (ENSRBIG00000042677) RRP12 (ENSRBIG00000021296) PGAM1 (ENSRBIG00000026513) ##22 EXOSC1 (ENSRBIG00000035618) ZDHHC16 (ENSRBIG00000027779) MMS19 (ENSRBIG00000036026) UBTD1 (ENSRBIG00000044391) ANKRD2 (ENSRBIG00000039282) PI4K2A (ENSRBIG00000037559) MORN4 (ENSRBIG00000017424) AVPI1 (ENSRBIG00000028956) ZFYVE27 (ENSRBIG00000031505) SFRP5 (ENSRBIG00000033947) GOLGA7B (ENSRBIG00000035613) CRTAC1 (ENSRBIG00000032795) R3HCC1L (ENSRBIG00000031918) LOXL4 (ENSRBIG00000029695) PYROXD2 (ENSRBIG00000029292) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2749 ENSRROG00000026745 CCNJ (ENSRROG00000001051) ZNF518A (ENSRROG00000022511) BLNK (ENSRROG00000030371) DNTT (ENSRROG00000043651) OPALIN (ENSRROG00000036213) TLL2 (ENSRROG00000011825) TM9SF3 (ENSRROG00000038774) PIK3AP1 (ENSRROG00000033166) LCOR (ENSRROG00000041759) SLIT1 (ENSRROG00000042977) ARHGAP19 (ENSRROG00000033746) FRAT1 (ENSRROG00000028813) FRAT2 (ENSRROG00000004277) RRP12 (ENSRROG00000032482) PGAM1 (ENSRROG00000039757) ##22 EXOSC1 (ENSRROG00000032589) ZDHHC16 (ENSRROG00000028529) MMS19 (ENSRROG00000039896) UBTD1 (ENSRROG00000041721) ANKRD2 (ENSRROG00000036593) MORN4 (ENSRROG00000044980) PI4K2A (ENSRROG00000040937) AVPI1 (ENSRROG00000042798) MARVELD1 (ENSRROG00000032671) ZFYVE27 (ENSRROG00000036164) SFRP5 (ENSRROG00000030455) GOLGA7B (ENSRROG00000029385) CRTAC1 (ENSRROG00000044890) R3HCC1L (ENSRROG00000029245) LOXL4 (ENSRROG00000023283) Golden snub-nosed monkey MODERN SPECIES 3070 ENSRROG00000044897 ##22 Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 ENSGT00390000013726 Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 17 CFH (ENSCSAG00000013551) CFHR4 (ENSCSAG00000013559) CFHR2 (ENSCSAG00000013569) CFHR5 (ENSCSAG00000013575) F13B (ENSCSAG00000013580) ASPM (ENSCSAG00000013591) ZBTB41 (ENSCSAG00000013610) CRB1 (ENSCSAG00000013619) DENND1B (ENSCSAG00000013627) C1orf53 (ENSCSAG00000013637) LHX9 (ENSCSAG00000013642) NEK7 (ENSCSAG00000013647) ATP6V1G3 (ENSCSAG00000013651) ENSCSAG00000013661 PTPRC (ENSCSAG00000013674) ENSCSAG00000000249 ##22 NR5A2 (ENSCSAG00000013702) ZNF281 (ENSCSAG00000000250) KIF14 (ENSCSAG00000013776) DDX59 (ENSCSAG00000013799) CAMSAP2 (ENSCSAG00000013807) GPR25 (ENSCSAG00000000251) INAVA (ENSCSAG00000013813) KIF21B (ENSCSAG00000013828) CACNA1S (ENSCSAG00000013846) ASCL5 (ENSCSAG00000000252) TMEM9 (ENSCSAG00000013860) PKP1 (ENSCSAG00000013888) TNNT2 (ENSCSAG00000013948) LAD1 (ENSCSAG00000013986) TNNI1 (ENSCSAG00000013998) Vervet Monkey MODERN SPECIES 24 PHKB (ENSCSAG00000005516) ITFG1 (ENSCSAG00000005522) NETO2 (ENSCSAG00000005537) ENSCSAG00000005547 GPT2 (ENSCSAG00000005551) C16orf87 (ENSCSAG00000005553) MYLK3 (ENSCSAG00000005556) ORC6 (ENSCSAG00000005565) VPS35 (ENSCSAG00000005571) SHCBP1 (ENSCSAG00000005573) ENSCSAG00000005578 ENSCSAG00000005589 ENSCSAG00000005598 ZNF267 (ENSCSAG00000005600) KRBOX5 (ENSCSAG00000005603) ENSCSAG00000018861 ##22 AHSP (ENSCSAG00000005606) RUSF1 (ENSCSAG00000005610) SLC5A2 (ENSCSAG00000005614) ARMC5 (ENSCSAG00000005617) COX6A2 (ENSCSAG00000005620) ENSCSAG00000005623 ITGAX (ENSCSAG00000005672) ITGAM (ENSCSAG00000005696) TRIM72 (ENSCSAG00000005704) PYCARD (ENSCSAG00000005708) FUS (ENSCSAG00000005711) PRSS36 (ENSCSAG00000005720) PRSS8 (ENSCSAG00000005726) KAT8 (ENSCSAG00000005731) BCKDK (ENSCSAG00000005732) Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 ENSGT00390000013726 Cercopithecinae_b ANCESTRAL SPECIES 14 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Olive baboon MODERN SPECIES 2 CCNJ (ENSPANG00000021449) ENSPANG00000043364 ZNF518A (ENSPANG00000021450) BLNK (ENSPANG00000021417) DNTT (ENSPANG00000021421) OPALIN (ENSPANG00000041066) TLL2 (ENSPANG00000021427) TM9SF3 (ENSPANG00000021412) PIK3AP1 (ENSPANG00000021373) LCOR (ENSPANG00000021376) SLIT1 (ENSPANG00000021383) ARHGAP19 (ENSPANG00000021365) FRAT1 (ENSPANG00000021367) FRAT2 (ENSPANG00000021368) RRP12 (ENSPANG00000021360) PGAM1 (ENSPANG00000021321) ##22 EXOSC1 (ENSPANG00000021324) ZDHHC16 (ENSPANG00000021326) MMS19 (ENSPANG00000021328) UBTD1 (ENSPANG00000021352) ANKRD2 (ENSPANG00000021351) HOGA1 (ENSPANG00000040105) MORN4 (ENSPANG00000021290) PI4K2A (ENSPANG00000021292) AVPI1 (ENSPANG00000021293) MARVELD1 (ENSPANG00000021294) ZFYVE27 (ENSPANG00000021295) SFRP5 (ENSPANG00000021296) GOLGA7B (ENSPANG00000021297) CRTAC1 (ENSPANG00000021299) R3HCC1L (ENSPANG00000021301) Cercopithecinae_d ANCESTRAL SPECIES 57 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000010434.b ENSGT00730000111173 ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Drill DUPLICATION Drill MODERN SPECIES 943 OGFRL1 (ENSMLEG00000003186) ENSMLEG00000041284 ENSMLEG00000021125 RIMS1 (ENSMLEG00000040237) KCNQ5 (ENSMLEG00000035213) ENSMLEG00000041839 ENSMLEG00000041383 ##22 ENSMLEG00000044269 KHDC1L (ENSMLEG00000037695) KHDC1 (ENSMLEG00000036769) ENSMLEG00000033221 KHDC3L (ENSMLEG00000003534) OOEP (ENSMLEG00000026859) DDX43 (ENSMLEG00000041961) CGAS (ENSMLEG00000040659) MTO1 (ENSMLEG00000044170) ENSMLEG00000038578 SLC17A5 (ENSMLEG00000012472) CD109 (ENSMLEG00000018460) ENSMLEG00000042167 Drill MODERN SPECIES 418 KRBOX5 (ENSMLEG00000033581) ENSMLEG00000033531 ENSMLEG00000028335 ##22 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 135 PLCG1 (ENSCATG00000034738) ZHX3 (ENSCATG00000029751) LPIN3 (ENSCATG00000040027) EMILIN3 (ENSCATG00000042373) CHD6 (ENSCATG00000039248) PTPRT (ENSCATG00000028168) ENSCATG00000022989 ENSCATG00000031027 ENSCATG00000044139 SRSF6 (ENSCATG00000030794) L3MBTL1 (ENSCATG00000042408) SGK2 (ENSCATG00000037153) IFT52 (ENSCATG00000037189) MYBL2 (ENSCATG00000043906) GTSF1L (ENSCATG00000030101) ENSCATG00000030480 ##22 TOX2 (ENSCATG00000045090) JPH2 (ENSCATG00000034238) OSER1 (ENSCATG00000033408) ENSCATG00000021831 GDAP1L1 (ENSCATG00000033032) FITM2 (ENSCATG00000044347) R3HDML (ENSCATG00000031774) HNF4A (ENSCATG00000041186) ENSCATG00000002768 ENSCATG00000036504 TTPAL (ENSCATG00000036927) SERINC3 (ENSCATG00000029893) PKIG (ENSCATG00000043848) ENSCATG00000037710 CCN5 (ENSCATG00000027475) Sooty mangabey MODERN SPECIES 143 ENSCATG00000043415 ENSCATG00000033482 LMBRD1 (ENSCATG00000036208) COL19A1 (ENSCATG00000042450) COL9A1 (ENSCATG00000028556) FAM135A (ENSCATG00000032192) SDHAF4 (ENSCATG00000032791) SMAP1 (ENSCATG00000002544) B3GAT2 (ENSCATG00000041104) OGFRL1 (ENSCATG00000044369) ENSCATG00000044513 RIMS1 (ENSCATG00000015586) ENSCATG00000023513 KCNQ5 (ENSCATG00000024600) ENSCATG00000003513 ENSCATG00000009252 ##22 ENSCATG00000008489 KHDC1L (ENSCATG00000030639) KHDC1 (ENSCATG00000033213) ENSCATG00000029105 DPPA5 (ENSCATG00000032143) KHDC3L (ENSCATG00000033310) OOEP (ENSCATG00000040076) DDX43 (ENSCATG00000031875) CGAS (ENSCATG00000007134) MTO1 (ENSCATG00000030762) EEF1A1 (ENSCATG00000039727) ENSCATG00000035249 SLC17A5 (ENSCATG00000040170) CD109 (ENSCATG00000041228) ENSCATG00000036740 Sooty mangabey MODERN SPECIES 598 CC2D2B (ENSCATG00000041657) CCNJ (ENSCATG00000045279) ZNF518A (ENSCATG00000012346) BLNK (ENSCATG00000040401) DNTT (ENSCATG00000042756) OPALIN (ENSCATG00000037495) TLL2 (ENSCATG00000033459) TM9SF3 (ENSCATG00000045143) PIK3AP1 (ENSCATG00000019471) LCOR (ENSCATG00000032950) SLIT1 (ENSCATG00000045209) ARHGAP19 (ENSCATG00000039747) FRAT1 (ENSCATG00000013421) FRAT2 (ENSCATG00000015176) RRP12 (ENSCATG00000045310) PGAM1 (ENSCATG00000041342) ##22 EXOSC1 (ENSCATG00000034114) ZDHHC16 (ENSCATG00000039594) MMS19 (ENSCATG00000035038) UBTD1 (ENSCATG00000041306) ANKRD2 (ENSCATG00000037823) PI4K2A (ENSCATG00000036094) MORN4 (ENSCATG00000037202) AVPI1 (ENSCATG00000036178) MARVELD1 (ENSCATG00000010571) ZFYVE27 (ENSCATG00000039847) SFRP5 (ENSCATG00000041752) GOLGA7B (ENSCATG00000039684) CRTAC1 (ENSCATG00000033100) ENSCATG00000039731 R3HCC1L (ENSCATG00000034502) Sooty mangabey MODERN SPECIES 100 ENSCATG00000029360 ZNF267 (ENSCATG00000043308) ENSCATG00000041271 ENSCATG00000032626 ENSCATG00000004566 ENSCATG00000031811 ##22 AHSP (ENSCATG00000043781) RUSF1 (ENSCATG00000018958) SLC5A2 (ENSCATG00000040947) TGFB1I1 (ENSCATG00000031587) ARMC5 (ENSCATG00000037817) ZNF843 (ENSCATG00000037338) COX6A2 (ENSCATG00000036520) ITGAD (ENSCATG00000038307) ITGAX (ENSCATG00000032947) ITGAM (ENSCATG00000011984) PYDC1 (ENSCATG00000035299) TRIM72 (ENSCATG00000041334) PYCARD (ENSCATG00000039391) FUS (ENSCATG00000034413) PRSS36 (ENSCATG00000041411) Macaca ANCESTRAL SPECIES 11 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 ENSGT00390000013726 Macaca_a ANCESTRAL SPECIES 13 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT01100000263539.b.a.a.a.a.a.b.a.a.a.a.a.a.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h.m ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00910000147157 ENSGT00390000013726 Rhesus DUPLICATION Rhesus MODERN SPECIES 19 CCNJ (ENSMMUG00000016689) ZNF518A (ENSMMUG00000001518) BLNK (ENSMMUG00000008687) DNTT (ENSMMUG00000022496) OPALIN (ENSMMUG00000050856) TLL2 (ENSMMUG00000015826) TM9SF3 (ENSMMUG00000001874) PIK3AP1 (ENSMMUG00000001876) ENSMMUG00000057701 LCOR (ENSMMUG00000010427) SLIT1 (ENSMMUG00000010428) ARHGAP19 (ENSMMUG00000047189) FRAT1 (ENSMMUG00000030511) FRAT2 (ENSMMUG00000019633) RRP12 (ENSMMUG00000019634) PGAM1 (ENSMMUG00000020027) ##22 EXOSC1 (ENSMMUG00000020028) ZDHHC16 (ENSMMUG00000020029) MMS19 (ENSMMUG00000020030) UBTD1 (ENSMMUG00000063092) ENSMMUG00000064764 ANKRD2 (ENSMMUG00000020032) PI4K2A (ENSMMUG00000020033) MORN4 (ENSMMUG00000020034) AVPI1 (ENSMMUG00000052153) MARVELD1 (ENSMMUG00000064106) ZFYVE27 (ENSMMUG00000015503) SFRP5 (ENSMMUG00000064002) CRTAC1 (ENSMMUG00000018154) GOLGA7B (ENSMMUG00000056243) ENSMMUG00000052648 Rhesus MODERN SPECIES 3 DYNC1I2 (ENSMMUG00000007301) ENSMMUG00000056746 SLC25A12 (ENSMMUG00000007310) HAT1 (ENSMMUG00000007313) METAP1D (ENSMMUG00000007314) DLX1 (ENSMMUG00000052354) DLX2 (ENSMMUG00000050910) ENSMMUG00000053699 ITGA6 (ENSMMUG00000002370) ENSMMUG00000054462 ENSMMUG00000061038 PDK1 (ENSMMUG00000022553) RAPGEF4 (ENSMMUG00000020792) MAP3K20 (ENSMMUG00000014672) CDCA7 (ENSMMUG00000014228) ENSMMUG00000010554 ##22 SP3 (ENSMMUG00000021818) ENSMMUG00000060201 OLA1 (ENSMMUG00000007092) SP9 (ENSMMUG00000023005) CIR1 (ENSMMUG00000023006) SCRN3 (ENSMMUG00000023009) GPR155 (ENSMMUG00000021012) ENSMMUG00000053004 WIPF1 (ENSMMUG00000009593) CHRNA1 (ENSMMUG00000021796) CHN1 (ENSMMUG00000021797) ATF2 (ENSMMUG00000003947) ATP5MC3 (ENSMMUG00000003954) LNPK (ENSMMUG00000023498) EVX2 (ENSMMUG00000061506) Rhesus MODERN SPECIES 12 GPT2 (ENSMMUG00000003288) C20H16orf87 (ENSMMUG00000049708) ORC6 (ENSMMUG00000011942) VPS35 (ENSMMUG00000011940) SHCBP1 (ENSMMUG00000012376) ENSMMUG00000012407 ENSMMUG00000059064 ENSMMUG00000058480 ENSMMUG00000053059 ENSMMUG00000062077 ENSMMUG00000055690 ENSMMUG00000048906 ENSMMUG00000050411 ZNF267 (ENSMMUG00000008253) ENSMMUG00000006133 ENSMMUG00000055973 ##22 AHSP (ENSMMUG00000000901) SLC5A2 (ENSMMUG00000000897) TGFB1I1 (ENSMMUG00000000896) ARMC5 (ENSMMUG00000000895) COX6A2 (ENSMMUG00000058046) RUSF1 (ENSMMUG00000000899) ITGAX (ENSMMUG00000014349) ITGAM (ENSMMUG00000044324) PYDC1 (ENSMMUG00000016275) PYCARD (ENSMMUG00000051859) TRIM72 (ENSMMUG00000016276) PRSS36 (ENSMMUG00000002033) KAT8 (ENSMMUG00000002030) BCKDK (ENSMMUG00000016032) PRSS53 (ENSMMUG00000016031) Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 19 ENSMFAG00000045985 CCNJ (ENSMFAG00000037933) BLNK (ENSMFAG00000043139) DNTT (ENSMFAG00000034600) OPALIN (ENSMFAG00000043114) TLL2 (ENSMFAG00000002794) TM9SF3 (ENSMFAG00000002926) PIK3AP1 (ENSMFAG00000046259) ENSMFAG00000050833 ENSMFAG00000060072 LCOR (ENSMFAG00000039632) SLIT1 (ENSMFAG00000045033) ENSMFAG00000062508 ARHGAP19 (ENSMFAG00000002183) RRP12 (ENSMFAG00000041558) PGAM1 (ENSMFAG00000003367) ##22 EXOSC1 (ENSMFAG00000001493) ZDHHC16 (ENSMFAG00000041608) MMS19 (ENSMFAG00000044772) UBTD1 (ENSMFAG00000044920) ANKRD2 (ENSMFAG00000039302) HOGA1 (ENSMFAG00000061572) MORN4 (ENSMFAG00000000472) PI4K2A (ENSMFAG00000003191) AVPI1 (ENSMFAG00000043548) ZFYVE27 (ENSMFAG00000031815) SFRP5 (ENSMFAG00000037089) GOLGA7B (ENSMFAG00000002194) CRTAC1 (ENSMFAG00000007568) ENSMFAG00000060607 R3HCC1L (ENSMFAG00000036084) Crab-eating macaque MODERN SPECIES 12 ORC6 (ENSMFAG00000005502) VPS35 (ENSMFAG00000049538) SHCBP1 (ENSMFAG00000036653) ENSMFAG00000065442 ENSMFAG00000005730 ENSMFAG00000049007 ENSMFAG00000052873 ENSMFAG00000001393 ENSMFAG00000041373 ENSMFAG00000064182 ENSMFAG00000034226 ENSMFAG00000051119 ENSMFAG00000058077 ZNF267 (ENSMFAG00000024474) ENSMFAG00000055709 ENSMFAG00000050567 ##22 ENSMFAG00000047326 ENSMFAG00000045574 AHSP (ENSMFAG00000044875) RUSF1 (ENSMFAG00000032375) SLC5A2 (ENSMFAG00000002366) TGFB1I1 (ENSMFAG00000041546) ARMC5 (ENSMFAG00000043898) COX6A2 (ENSMFAG00000042019) ITGAX (ENSMFAG00000032646) ITGAM (ENSMFAG00000031182) PYDC1 (ENSMFAG00000030032) TRIM72 (ENSMFAG00000035762) PYCARD (ENSMFAG00000033296) FUS (ENSMFAG00000031794) ENSMFAG00000063406 Crab-eating macaque MODERN SPECIES ENSMFAG00000060456 BRINP3 (ENSMFAG00000045708) SKP1 (ENSMFAG00000052365) RGS18 (ENSMFAG00000059808) RGS21 (ENSMFAG00000060899) RGS1 (ENSMFAG00000036716) RGS13 (ENSMFAG00000033037) RGS2 (ENSMFAG00000033433) UCHL5 (ENSMFAG00000038349) ENSMFAG00000058552 RO60 (ENSMFAG00000016020) CDC73 (ENSMFAG00000042168) B3GALT2 (ENSMFAG00000030327) ENSMFAG00000030333 ENSMFAG00000031828 ENSMFAG00000039121 ##22 KCNT2 (ENSMFAG00000030817) CFH (ENSMFAG00000039896) ENSMFAG00000035708 CFHR5 (ENSMFAG00000033730) F13B (ENSMFAG00000038280) ASPM (ENSMFAG00000044554) ZBTB41 (ENSMFAG00000042390) CRB1 (ENSMFAG00000037248) ENSMFAG00000059753 DENND1B (ENSMFAG00000040708) ENSMFAG00000050075 C1orf53 (ENSMFAG00000058672) LHX9 (ENSMFAG00000037285) NEK7 (ENSMFAG00000042183) ATP6V1G3 (ENSMFAG00000038612) Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 558 EYS (ENSMNEG00000030719) ENSMNEG00000006166 ENSMNEG00000015246 ADGRB3 (ENSMNEG00000033979) LMBRD1 (ENSMNEG00000044526) COL19A1 (ENSMNEG00000043640) COL9A1 (ENSMNEG00000030689) FAM135A (ENSMNEG00000034243) SDHAF4 (ENSMNEG00000030604) SMAP1 (ENSMNEG00000033567) B3GAT2 (ENSMNEG00000045320) OGFRL1 (ENSMNEG00000029789) ENSMNEG00000035315 RIMS1 (ENSMNEG00000031889) ENSMNEG00000042932 ENSMNEG00000031799 ##22 KCNQ5 (ENSMNEG00000040005) ENSMNEG00000042746 ENSMNEG00000035766 KHDC1 (ENSMNEG00000035131) DPPA5 (ENSMNEG00000034230) KHDC3L (ENSMNEG00000038910) OOEP (ENSMNEG00000032704) DDX43 (ENSMNEG00000038522) CGAS (ENSMNEG00000044904) MTO1 (ENSMNEG00000038616) ENSMNEG00000035651 ENSMNEG00000040657 SLC17A5 (ENSMNEG00000036675) CD109 (ENSMNEG00000033808) ENSMNEG00000030329 Pig-tailed macaque MODERN SPECIES 583 ENSMNEG00000041155 ENSMNEG00000039016 ZNF267 (ENSMNEG00000032500) ENSMNEG00000030235 ENSMNEG00000043651 ENSMNEG00000029853 ##22 AHSP (ENSMNEG00000042151) RUSF1 (ENSMNEG00000035348) SLC5A2 (ENSMNEG00000006371) TGFB1I1 (ENSMNEG00000043662) ARMC5 (ENSMNEG00000031517) ZNF843 (ENSMNEG00000032278) COX6A2 (ENSMNEG00000043274) ITGAD (ENSMNEG00000035897) ITGAX (ENSMNEG00000044550) ENSMNEG00000027747 ITGAM (ENSMNEG00000040512) PYDC1 (ENSMNEG00000034009) TRIM72 (ENSMNEG00000041227) PYCARD (ENSMNEG00000041363) FUS (ENSMNEG00000027646) Platyrrhini ANCESTRAL SPECIES 14 ENSGT01100000263542.C ENSGT00940000164312 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Mas night monkey MODERN SPECIES 658 ENSANAG00000037354 ZNF518A (ENSANAG00000037819) BLNK (ENSANAG00000027173) DNTT (ENSANAG00000037070) OPALIN (ENSANAG00000038093) TLL2 (ENSANAG00000037945) TM9SF3 (ENSANAG00000028656) PIK3AP1 (ENSANAG00000008972) ENSANAG00000033782 LCOR (ENSANAG00000033126) ENSANAG00000037982 SLIT1 (ENSANAG00000033563) ENSANAG00000021580 ARHGAP19 (ENSANAG00000003403) RRP12 (ENSANAG00000037485) PGAM1 (ENSANAG00000023598) ##22 EXOSC1 (ENSANAG00000034669) ZDHHC16 (ENSANAG00000032609) MMS19 (ENSANAG00000023237) UBTD1 (ENSANAG00000035205) ANKRD2 (ENSANAG00000038359) PI4K2A (ENSANAG00000019727) MORN4 (ENSANAG00000023217) AVPI1 (ENSANAG00000029881) MARVELD1 (ENSANAG00000031120) ZFYVE27 (ENSANAG00000038112) SFRP5 (ENSANAG00000020345) GOLGA7B (ENSANAG00000026383) CRTAC1 (ENSANAG00000035892) R3HCC1L (ENSANAG00000035504) LOXL4 (ENSANAG00000028977) Cebidae ANCESTRAL SPECIES 17 ENSGT00570000079101.a.a ENSGT01100000263542.C ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Cebidae_a ANCESTRAL SPECIES 13 ENSGT00500000044903 ENSGT00570000079101.a.a ENSGT01100000263542.C ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.h ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000010434.b ENSGT00730000111173 ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 90 BICDL1 (ENSSBOG00000020926) CIT (ENSSBOG00000033965) ENSSBOG00000024739 PRKAB1 (ENSSBOG00000030942) TMEM233 (ENSSBOG00000023158) CCDC60 (ENSSBOG00000027014) HSPB8 (ENSSBOG00000022568) SRRM4 (ENSSBOG00000035310) ENSSBOG00000036079 SUDS3 (ENSSBOG00000034907) TAOK3 (ENSSBOG00000032744) PEBP1 (ENSSBOG00000025736) VSIG10 (ENSSBOG00000036249) WSB2 (ENSSBOG00000025618) RFC5 (ENSSBOG00000030812) ENSSBOG00000026256 ##22 KSR2 (ENSSBOG00000033625) NOS1 (ENSSBOG00000009305) FBXO21 (ENSSBOG00000030663) TESC (ENSSBOG00000027843) FBXW8 (ENSSBOG00000026849) RNFT2 (ENSSBOG00000027445) SPRING1 (ENSSBOG00000027268) MED13L (ENSSBOG00000029205) TBX3 (ENSSBOG00000029505) TBX5 (ENSSBOG00000025834) ENSSBOG00000021434 LHX5 (ENSSBOG00000029868) SDSL (ENSSBOG00000033491) SDS (ENSSBOG00000029121) PLBD2 (ENSSBOG00000013245) Bolivian squirrel monkey MODERN SPECIES 47 TCTN3 (ENSSBOG00000033268) ENTPD1 (ENSSBOG00000020994) CC2D2B (ENSSBOG00000034706) CCNJ (ENSSBOG00000014297) BLNK (ENSSBOG00000033542) DNTT (ENSSBOG00000021895) OPALIN (ENSSBOG00000021409) TLL2 (ENSSBOG00000023237) TM9SF3 (ENSSBOG00000032326) PIK3AP1 (ENSSBOG00000030394) ENSSBOG00000018698 LCOR (ENSSBOG00000025139) SLIT1 (ENSSBOG00000021151) ARHGAP19 (ENSSBOG00000020541) RRP12 (ENSSBOG00000030992) PGAM1 (ENSSBOG00000027958) ##22 EXOSC1 (ENSSBOG00000000359) ZDHHC16 (ENSSBOG00000024995) MMS19 (ENSSBOG00000034874) ENSSBOG00000032966 UBTD1 (ENSSBOG00000027361) ANKRD2 (ENSSBOG00000030371) MORN4 (ENSSBOG00000033451) PI4K2A (ENSSBOG00000034802) ZFYVE27 (ENSSBOG00000019948) SFRP5 (ENSSBOG00000014737) GOLGA7B (ENSSBOG00000028559) CRTAC1 (ENSSBOG00000028883) R3HCC1L (ENSSBOG00000032433) LOXL4 (ENSSBOG00000029353) PYROXD2 (ENSSBOG00000029428) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 161 FBLN5 (ENSSBOG00000019554) TRIP11 (ENSSBOG00000025442) ATXN3 (ENSSBOG00000018576) ENSSBOG00000021648 CPSF2 (ENSSBOG00000024571) SLC24A4 (ENSSBOG00000035828) RIN3 (ENSSBOG00000034366) ENSSBOG00000032030 GOLGA5 (ENSSBOG00000001017) CHGA (ENSSBOG00000025077) ITPK1 (ENSSBOG00000010312) LYSET (ENSSBOG00000028065) ENSSBOG00000022949 GON7 (ENSSBOG00000029346) UBR7 (ENSSBOG00000034529) ENSSBOG00000030296 ##22 BTBD7 (ENSSBOG00000025051) ENSSBOG00000021472 ENSSBOG00000024236 ENSSBOG00000025927 UNC79 (ENSSBOG00000012912) PRIMA1 (ENSSBOG00000020916) ENSSBOG00000018330 FAM181A (ENSSBOG00000019030) ASB2 (ENSSBOG00000020421) ENSSBOG00000016662 CCDC197 (ENSSBOG00000027574) OTUB2 (ENSSBOG00000031922) DDX24 (ENSSBOG00000035521) Bolivian squirrel monkey MODERN SPECIES 76 SOCS2 (ENSSBOG00000026935) CRADD (ENSSBOG00000035932) ENSSBOG00000033402 PLXNC1 (ENSSBOG00000034558) CEP83 (ENSSBOG00000019512) ENSSBOG00000023873 TMCC3 (ENSSBOG00000021120) ENSSBOG00000036052 ENSSBOG00000026305 NR2C1 (ENSSBOG00000027345) FGD6 (ENSSBOG00000023435) VEZT (ENSSBOG00000025742) METAP2 (ENSSBOG00000020444) USP44 (ENSSBOG00000033632) NTN4 (ENSSBOG00000028448) ENSSBOG00000035835 ##22 ENSSBOG00000036179 CCDC38 (ENSSBOG00000035007) ENSSBOG00000030506 AMDHD1 (ENSSBOG00000022637) HAL (ENSSBOG00000035442) LTA4H (ENSSBOG00000032578) ENSSBOG00000034818 ELK3 (ENSSBOG00000033992) CDK17 (ENSSBOG00000023998) ENSSBOG00000027979 CFAP54 (ENSSBOG00000024712) NEDD1 (ENSSBOG00000032018) ENSSBOG00000022813 ENSSBOG00000035474 IKBIP (ENSSBOG00000030243) Capuchin DUPLICATION Capuchin MODERN SPECIES 169 CCDC92 (ENSCCAG00000036674) ENSCCAG00000032606 DNAH10 (ENSCCAG00000031304) ATP6V0A2 (ENSCCAG00000028342) TCTN2 (ENSCCAG00000017802) GTF2H3 (ENSCCAG00000032941) EIF2B1 (ENSCCAG00000034115) DDX55 (ENSCCAG00000021652) TMED2 (ENSCCAG00000019588) RILPL1 (ENSCCAG00000033275) ENSCCAG00000017043 SNRNP35 (ENSCCAG00000001685) RILPL2 (ENSCCAG00000025713) KMT5A (ENSCCAG00000033649) SBNO1 (ENSCCAG00000035316) ENSCCAG00000036671 ##22 CDK2AP1 (ENSCCAG00000023979) MPHOSPH9 (ENSCCAG00000028545) PITPNM2 (ENSCCAG00000034095) ARL6IP4 (ENSCCAG00000037235) OGFOD2 (ENSCCAG00000020207) ENSCCAG00000020553 ABCB9 (ENSCCAG00000027976) VPS37B (ENSCCAG00000035653) HIP1R (ENSCCAG00000026938) ENSCCAG00000000389 CCDC62 (ENSCCAG00000023302) ENSCCAG00000036113 ENSCCAG00000024604 KNTC1 (ENSCCAG00000021319) RSRC2 (ENSCCAG00000019182) Capuchin MODERN SPECIES 299 ENSCCAG00000032261 CCNJ (ENSCCAG00000034523) BLNK (ENSCCAG00000037036) DNTT (ENSCCAG00000037102) OPALIN (ENSCCAG00000022700) TLL2 (ENSCCAG00000024393) TM9SF3 (ENSCCAG00000034997) PIK3AP1 (ENSCCAG00000012039) RPS3A (ENSCCAG00000007510) LCOR (ENSCCAG00000022922) ENSCCAG00000034650 SLIT1 (ENSCCAG00000023960) ARHGAP19 (ENSCCAG00000025323) ENSCCAG00000024088 PGAM1 (ENSCCAG00000033993) ##22 EXOSC1 (ENSCCAG00000023986) ZDHHC16 (ENSCCAG00000031734) MMS19 (ENSCCAG00000028150) UBTD1 (ENSCCAG00000033365) ANKRD2 (ENSCCAG00000017610) MORN4 (ENSCCAG00000037340) PI4K2A (ENSCCAG00000027223) AVPI1 (ENSCCAG00000023548) MARVELD1 (ENSCCAG00000008149) ZFYVE27 (ENSCCAG00000027456) SFRP5 (ENSCCAG00000033972) GOLGA7B (ENSCCAG00000032656) CRTAC1 (ENSCCAG00000031919) R3HCC1L (ENSCCAG00000021515) LOXL4 (ENSCCAG00000022768) Marmoset DUPLICATION Marmoset MODERN SPECIES 3 BLNK (ENSCJAG00000016270) DNTT (ENSCJAG00000016325) OPALIN (ENSCJAG00000047907) TLL2 (ENSCJAG00000016371) TM9SF3 (ENSCJAG00000016413) ENSCJAG00000071491 PIK3AP1 (ENSCJAG00000016474) LCOR (ENSCJAG00000022966) SLIT1 (ENSCJAG00000036372) ARHGAP19 (ENSCJAG00000016514) ENSCJAG00000042089 ENSCJAG00000058491 RRP12 (ENSCJAG00000016549) ENSCJAG00000022968 ENSCJAG00000079967 PGAM1 (ENSCJAG00000069022) ##22 EXOSC1 (ENSCJAG00000016586) ZDHHC16 (ENSCJAG00000016605) MMS19 (ENSCJAG00000016651) UBTD1 (ENSCJAG00000016722) ANKRD2 (ENSCJAG00000016726) HOGA1 (ENSCJAG00000047404) MORN4 (ENSCJAG00000016744) PI4K2A (ENSCJAG00000016755) AVPI1 (ENSCJAG00000062664) MARVELD1 (ENSCJAG00000016782) ZFYVE27 (ENSCJAG00000016783) SFRP5 (ENSCJAG00000016808) ENSCJAG00000087255 CRTAC1 (ENSCJAG00000016821) R3HCC1L (ENSCJAG00000016839) Marmoset MODERN SPECIES 19 LRRC42 (ENSCJAG00000004868) ENSCJAG00000004866 DIO1 (ENSCJAG00000004861) ENSCJAG00000047857 YIPF1 (ENSCJAG00000004828) ENSCJAG00000004707 GLIS1 (ENSCJAG00000004690) DMRTB1 (ENSCJAG00000004682) LRP8 (ENSCJAG00000004555) ENSCJAG00000042378 CZIB (ENSCJAG00000004526) CPT2 (ENSCJAG00000004512) SLC1A7 (ENSCJAG00000004493) PODN (ENSCJAG00000064930) ENSCJAG00000077339 ENSCJAG00000002731 ##22 SCP2 (ENSCJAG00000004449) ECHDC2 (ENSCJAG00000004375) ENSCJAG00000070433 ZYG11A (ENSCJAG00000004369) ENSCJAG00000082971 ENSCJAG00000084051 ZFYVE9 (ENSCJAG00000021597) CC2D1B (ENSCJAG00000021596) ORC1 (ENSCJAG00000021595) PRPF38A (ENSCJAG00000021594) ENSCJAG00000073876 TUT4 (ENSCJAG00000021588) ENSCJAG00000070243 GPX7 (ENSCJAG00000054201) SHISAL2A (ENSCJAG00000021585) Euarchontoglires_A ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Tree shrew MODERN SPECIES 1579 RRP12 (ENSTBEG00000004907) PGAM1 (ENSTBEG00000005913) ##22 EXOSC1 (ENSTBEG00000006011) ZDHHC16 (ENSTBEG00000006110) MMS19 (ENSTBEG00000006213) UBTD1 (ENSTBEG00000006428) Glires ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Lagomorpha ANCESTRAL SPECIES 17 ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049709 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Pika MODERN SPECIES 4300 ARHGAP19 (ENSOPRG00000019004) ENSOPRG00000004967 FRAT2 (ENSOPRG00000004981) RRP12 (ENSOPRG00000005001) PGAM1 (ENSOPRG00000005058) ##22 EXOSC1 (ENSOPRG00000005065) ZDHHC16 (ENSOPRG00000005078) MMS19 (ENSOPRG00000005093) UBTD1 (ENSOPRG00000005157) ANKRD2 (ENSOPRG00000005162) HOGA1 (ENSOPRG00000005177) C10orf62 (ENSOPRG00000005193) MORN4 (ENSOPRG00000005194) PI4K2A (ENSOPRG00000005203) ENSOPRG00000005220 ZFYVE27 (ENSOPRG00000005240) SFRP5 (ENSOPRG00000005262) GOLGA7B (ENSOPRG00000005279) CRTAC1 (ENSOPRG00000005288) ENSOPRG00000005351 Rodentia ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Rodentia_A DUPLICATION Rodentia_A DUPLICATION Rodentia_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.a ##22 Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.i.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000000234 ENSHGLG00000043321 ENSHGLG00000015276 HMGXB4 (ENSHGLG00000037083) TOM1 (ENSHGLG00000015296) HMOX1 (ENSHGLG00000008950) MCM5 (ENSHGLG00000008256) RASD2 (ENSHGLG00000007940) ENSHGLG00000007308 ENSHGLG00000006549 ENSHGLG00000036993 ARHGAP19 (ENSHGLG00000043596) ENSHGLG00000039731 FRAT2 (ENSHGLG00000021387) RRP12 (ENSHGLG00000016772) PGAM1 (ENSHGLG00000016865) ##22 EXOSC1 (ENSHGLG00000016927) ZDHHC16 (ENSHGLG00000017705) MMS19 (ENSHGLG00000019329) UBTD1 (ENSHGLG00000006858) ANKRD2 (ENSHGLG00000008161) ENSHGLG00000033035 HOGA1 (ENSHGLG00000038633) MORN4 (ENSHGLG00000018443) PI4K2A (ENSHGLG00000013652) AVPI1 (ENSHGLG00000010646) MARVELD1 (ENSHGLG00000034069) SFRP5 (ENSHGLG00000010192) ZFYVE27 (ENSHGLG00000013301) ENSHGLG00000038015 ENSHGLG00000011698 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.a ##22 Guinea pig MODERN SPECIES 1 ENTPD1 (ENSCPOG00000003603) CCNJ (ENSCPOG00000001476) ZNF518A (ENSCPOG00000006322) BLNK (ENSCPOG00000012667) DNTT (ENSCPOG00000002370) ENSCPOG00000034213 TLL2 (ENSCPOG00000000539) TM9SF3 (ENSCPOG00000002320) PIK3AP1 (ENSCPOG00000012888) ENSCPOG00000005739 LCOR (ENSCPOG00000035033) SLIT1 (ENSCPOG00000005743) ARHGAP19 (ENSCPOG00000021474) FRAT2 (ENSCPOG00000000139) RRP12 (ENSCPOG00000004215) PGAM1 (ENSCPOG00000034665) ##22 EXOSC1 (ENSCPOG00000001173) ZDHHC16 (ENSCPOG00000006710) MMS19 (ENSCPOG00000006715) UBTD1 (ENSCPOG00000033582) ANKRD2 (ENSCPOG00000035324) HOGA1 (ENSCPOG00000004555) C10orf62 (ENSCPOG00000033899) MORN4 (ENSCPOG00000031641) PI4K2A (ENSCPOG00000004558) AVPI1 (ENSCPOG00000024508) MARVELD1 (ENSCPOG00000024434) ENSCPOG00000013283 SFRP5 (ENSCPOG00000021880) GOLGA7B (ENSCPOG00000031966) CRTAC1 (ENSCPOG00000007832) Sciuridae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.a ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.a ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.a ##22 Squirrel MODERN SPECIES 236 CC2D2B (ENSSTOG00000005628) CCNJ (ENSSTOG00000005634) ZNF518A (ENSSTOG00000021018) BLNK (ENSSTOG00000012711) DNTT (ENSSTOG00000012729) OPALIN (ENSSTOG00000012748) TLL2 (ENSSTOG00000002746) TM9SF3 (ENSSTOG00000002762) PIK3AP1 (ENSSTOG00000002786) LCOR (ENSSTOG00000010811) SLIT1 (ENSSTOG00000010816) ARHGAP19 (ENSSTOG00000019537) FRAT1 (ENSSTOG00000009543) FRAT2 (ENSSTOG00000023988) RRP12 (ENSSTOG00000006515) PGAM1 (ENSSTOG00000025955) ##22 EXOSC1 (ENSSTOG00000006615) ZDHHC16 (ENSSTOG00000006627) MMS19 (ENSSTOG00000006641) UBTD1 (ENSSTOG00000006700) ANKRD2 (ENSSTOG00000006701) ENSSTOG00000020441 HOGA1 (ENSSTOG00000011929) MORN4 (ENSSTOG00000026926) PI4K2A (ENSSTOG00000006737) AVPI1 (ENSSTOG00000029293) MARVELD1 (ENSSTOG00000006756) ZFYVE27 (ENSSTOG00000012103) SFRP5 (ENSSTOG00000012113) GOLGA7B (ENSSTOG00000012116) CRTAC1 (ENSSTOG00000012122) Rodentia_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.b ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.b ##22 Alpin marmot MODERN SPECIES 39 ENSMMMG00000021357 ZNF518A (ENSMMMG00000021365) BLNK (ENSMMMG00000021371) DNTT (ENSMMMG00000021389) OPALIN (ENSMMMG00000021401) TLL2 (ENSMMMG00000021409) ENSMMMG00000021418 PIK3AP1 (ENSMMMG00000021426) ENSMMMG00000021445 ENSMMMG00000021452 LCOR (ENSMMMG00000021462) SLIT1 (ENSMMMG00000021470) ARHGAP19 (ENSMMMG00000021533) FRAT2 (ENSMMMG00000021560) RRP12 (ENSMMMG00000021563) PGAM1 (ENSMMMG00000021588) ##22 EXOSC1 (ENSMMMG00000021593) ZDHHC16 (ENSMMMG00000021606) MMS19 (ENSMMMG00000021617) UBTD1 (ENSMMMG00000021672) ANKRD2 (ENSMMMG00000021677) HOGA1 (ENSMMMG00000021688) C10orf62 (ENSMMMG00000021691) ENSMMMG00000021693 PI4K2A (ENSMMMG00000021697) AVPI1 (ENSMMMG00000021725) ZFYVE27 (ENSMMMG00000021729) SFRP5 (ENSMMMG00000021743) GOLGA7B (ENSMMMG00000021751) CRTAC1 (ENSMMMG00000021757) R3HCC1L (ENSMMMG00000021780) Hystricomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.i.b ##22 Naked mole-rat female MODERN SPECIES 20 NECTIN4 (ENSHGLG00000010781) ARHGAP30 (ENSHGLG00000006495) USF1 (ENSHGLG00000012402) TSTD1 (ENSHGLG00000035841) ENSHGLG00000038623 ENSHGLG00000015520 ENSHGLG00000048048 ENSHGLG00000049342 CD244 (ENSHGLG00000016536) ENSHGLG00000046741 CD48 (ENSHGLG00000016645) SLAMF1 (ENSHGLG00000013870) ENSHGLG00000036722 CD84 (ENSHGLG00000018167) ENSHGLG00000040731 ENSHGLG00000044874 ##22 VANGL2 (ENSHGLG00000015020) NHLH1 (ENSHGLG00000020397) NCSTN (ENSHGLG00000007191) COPA (ENSHGLG00000011307) PEX19 (ENSHGLG00000006365) DCAF8 (ENSHGLG00000009593) PEA15 (ENSHGLG00000049375) CASQ1 (ENSHGLG00000036911) ATP1A4 (ENSHGLG00000018340) ATP1A2 (ENSHGLG00000015210) IGSF8 (ENSHGLG00000017599) KCNJ9 (ENSHGLG00000015357) KCNJ10 (ENSHGLG00000035959) PIGM (ENSHGLG00000020908) SLAMF9 (ENSHGLG00000014754) Rodentia_A ANCESTRAL SPECIES 15 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.j ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Sciuridae ANCESTRAL SPECIES 21 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.j ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Marmotini ANCESTRAL SPECIES 16 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.j ##22 ENSGT00390000015287.h.g.a ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Marmotini_b ANCESTRAL SPECIES 97 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.j ##22 ENSGT00390000015287.h.g.a ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Arctic ground squirrel MODERN SPECIES 145 ZNF518A (ENSUPAG00010013976) BLNK (ENSUPAG00010013982) DNTT (ENSUPAG00010014016) OPALIN (ENSUPAG00010014040) TLL2 (ENSUPAG00010014051) TM9SF3 (ENSUPAG00010014080) PIK3AP1 (ENSUPAG00010014107) HNRNPA1L2 (ENSUPAG00010014177) ENSUPAG00010014178 LCOR (ENSUPAG00010014187) SLIT1 (ENSUPAG00010014205) ARHGAP19 (ENSUPAG00010014329) FRAT1 (ENSUPAG00010014412) FRAT2 (ENSUPAG00010014413) RRP12 (ENSUPAG00010014418) PGAM1 (ENSUPAG00010014455) ##22 ENSUPAG00010014471 ZDHHC16 (ENSUPAG00010014509) MMS19 (ENSUPAG00010014546) UBTD1 (ENSUPAG00010014630) ANKRD2 (ENSUPAG00010014650) HOGA1 (ENSUPAG00010014672) ENSUPAG00010014696 MORN4 (ENSUPAG00010014704) PI4K2A (ENSUPAG00010014721) AVPI1 (ENSUPAG00010014745) MARVELD1 (ENSUPAG00010014753) ZFYVE27 (ENSUPAG00010014758) SFRP5 (ENSUPAG00010014793) GOLGA7B (ENSUPAG00010014804) CRTAC1 (ENSUPAG00010014843) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 13 BLNK (ENSSVLG00005021548) DNTT (ENSSVLG00005021305) OPALIN (ENSSVLG00005021033) TLL2 (ENSSVLG00005020186) TM9SF3 (ENSSVLG00005019967) PIK3AP1 (ENSSVLG00005019678) ENSSVLG00005019543 ENSSVLG00005019472 LCOR (ENSSVLG00005019384) SLIT1 (ENSSVLG00005018555) ENSSVLG00005018513 ARHGAP19 (ENSSVLG00005018106) FRAT1 (ENSSVLG00005018038) ENSSVLG00005018017 RRP12 (ENSSVLG00005017893) PGAM1 (ENSSVLG00005017816) ##22 EXOSC1 (ENSSVLG00005017650) ZDHHC16 (ENSSVLG00005017379) MMS19 (ENSSVLG00005017214) ANKRD2 (ENSSVLG00005016694) C10orf62 (ENSSVLG00005016610) HOGA1 (ENSSVLG00005016513) MORN4 (ENSSVLG00005016417) PI4K2A (ENSSVLG00005016376) AVPI1 (ENSSVLG00005016336) MARVELD1 (ENSSVLG00005016317) ZFYVE27 (ENSSVLG00005015995) SFRP5 (ENSSVLG00005015909) GOLGA7B (ENSSVLG00005015799) CRTAC1 (ENSSVLG00005015382) R3HCC1L (ENSSVLG00005015247) Eurasian red squirrel MODERN SPECIES 14 ABCC9 (ENSSVLG00005022831) CMAS (ENSSVLG00005010853) ENSSVLG00005010892 ST8SIA1 (ENSSVLG00005010944) C2CD5 (ENSSVLG00005011062) ETNK1 (ENSSVLG00005011233) ENSSVLG00005011366 SOX5 (ENSSVLG00005011483) BCAT1 (ENSSVLG00005012012) ENSSVLG00005012187 DNAI7 (ENSSVLG00005012568) ETFRF1 (ENSSVLG00005013055) KRAS (ENSSVLG00005013177) LMNTD1 (ENSSVLG00005013266) RASSF8 (ENSSVLG00005013368) ENSSVLG00005013521 ##22 BHLHE41 (ENSSVLG00005013568) SSPN (ENSSVLG00005013638) ITPR2 (ENSSVLG00005014004) INTS13 (ENSSVLG00005014650) FGFR1OP2 (ENSSVLG00005014699) ENSSVLG00005014788 TM7SF3 (ENSSVLG00005014809) MED21 (ENSSVLG00005014838) STK38L (ENSSVLG00005014875) BMAL2 (ENSSVLG00005015014) SMCO2 (ENSSVLG00005015897) ENSSVLG00005016025 ENSSVLG00005016042 PPFIBP1 (ENSSVLG00005016094) REP15 (ENSSVLG00005016211) Hystricomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.j ##22 Naked mole-rat female MODERN SPECIES 18 LRRC74A (ENSHGLG00000013955) ANGEL1 (ENSHGLG00000019080) VASH1 (ENSHGLG00000014181) ENSHGLG00000009813 ESRRB (ENSHGLG00000007373) GPATCH2L (ENSHGLG00000011249) IFT43 (ENSHGLG00000006159) TGFB3 (ENSHGLG00000041469) ENSHGLG00000009260 ERG28 (ENSHGLG00000035965) FLVCR2 (ENSHGLG00000012149) BATF (ENSHGLG00000009995) ENSHGLG00000032847 ENSHGLG00000034007 JDP2 (ENSHGLG00000046590) ENSHGLG00000012043 ##22 Fos (ENSHGLG00000009642) TMED10 (ENSHGLG00000009862) ENSHGLG00000011281 ZC2HC1C (ENSHGLG00000012165) ENSHGLG00000014222 ENSHGLG00000040406 MLH3 (ENSHGLG00000015005) EIF2B2 (ENSHGLG00000016520) ENSHGLG00000050804 ENSHGLG00000018678 ENSHGLG00000013243 RPS6KL1 (ENSHGLG00000013483) DLST (ENSHGLG00000009814) PROX2 (ENSHGLG00000011710) ENSHGLG00000046547 Hystricomorpha_a ANCESTRAL SPECIES 3 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.j ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Hystricomorpha_b ANCESTRAL SPECIES 14 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a.j ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 214 ENTPD1 (ENSCLAG00000002693) CC2D2B (ENSCLAG00000002936) CCNJ (ENSCLAG00000003191) ENSCLAG00000004870 ZNF518A (ENSCLAG00000017653) BLNK (ENSCLAG00000005498) DNTT (ENSCLAG00000006186) OPALIN (ENSCLAG00000006654) TLL2 (ENSCLAG00000007122) TM9SF3 (ENSCLAG00000002078) PIK3AP1 (ENSCLAG00000002443) LCOR (ENSCLAG00000008402) SLIT1 (ENSCLAG00000009153) ARHGAP19 (ENSCLAG00000002574) RRP12 (ENSCLAG00000003753) ENSCLAG00000002369 ##22 EXOSC1 (ENSCLAG00000002463) ZDHHC16 (ENSCLAG00000002570) MMS19 (ENSCLAG00000002928) UBTD1 (ENSCLAG00000002195) ANKRD2 (ENSCLAG00000002245) HOGA1 (ENSCLAG00000002513) MORN4 (ENSCLAG00000001852) PI4K2A (ENSCLAG00000001867) AVPI1 (ENSCLAG00000001993) MARVELD1 (ENSCLAG00000002008) ZFYVE27 (ENSCLAG00000002084) SFRP5 (ENSCLAG00000002118) GOLGA7B (ENSCLAG00000002560) CRTAC1 (ENSCLAG00000002601) R3HCC1L (ENSCLAG00000002695) Long-tailed chinchilla MODERN SPECIES 169 NME7 (ENSCLAG00000007842) ATP1B1 (ENSCLAG00000009477) DPT (ENSCLAG00000005439) ENSCLAG00000005901 TBX19 (ENSCLAG00000006520) SFT2D2 (ENSCLAG00000007183) ENSCLAG00000004496 GPR161 (ENSCLAG00000005310) DCAF6 (ENSCLAG00000005742) ENSCLAG00000004770 ADCY10 (ENSCLAG00000005189) RCSD1 (ENSCLAG00000004726) CREG1 (ENSCLAG00000005740) CD247 (ENSCLAG00000005425) POU2F1 (ENSCLAG00000005927) ENSCLAG00000005067 ##22 STYXL2 (ENSCLAG00000006188) ENSCLAG00000017324 MAEL (ENSCLAG00000006862) ILDR2 (ENSCLAG00000008045) ENSCLAG00000008737 TADA1 (ENSCLAG00000009819) POGK (ENSCLAG00000004943) ENSCLAG00000008264 FAM78B (ENSCLAG00000009778) UCK2 (ENSCLAG00000010692) ENSCLAG00000004400 TMCO1 (ENSCLAG00000004923) ENSCLAG00000006096 MGST3 (ENSCLAG00000007690) LRRC52 (ENSCLAG00000006632) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 296 ENSODEG00000000552 ENSODEG00000000567 ENSODEG00000000580 ENSODEG00000000592 ENSODEG00000018618 ENSODEG00000000602 ##22 ENSODEG00000018667 ENSODEG00000001156 ENSODEG00000018765 ENSODEG00000001186 ENSODEG00000001196 ENSODEG00000001234 ENSODEG00000001248 ENSODEG00000001317 ENSODEG00000018656 ENSODEG00000001352 ENSODEG00000018550 Degu MODERN SPECIES 261 ENSODEG00000014860 ENSODEG00000019926 ARL5B (ENSODEG00000013924) NSUN6 (ENSODEG00000010093) ENSODEG00000011487 ##22 CACNB2 (ENSODEG00000009971) SLC39A12 (ENSODEG00000010075) MRC1 (ENSODEG00000010406) TMEM236 (ENSODEG00000013808) ENSODEG00000010216 HACD1 (ENSODEG00000012161) ST8SIA6 (ENSODEG00000010495) ENSODEG00000011037 ENSODEG00000009896 ENSODEG00000009660 CUBN (ENSODEG00000010405) RSU1 (ENSODEG00000009946) C1QL3 (ENSODEG00000010477) PTER (ENSODEG00000010317) ENSODEG00000010031 Degu MODERN SPECIES 157 ENSODEG00000007553 ENSODEG00000006646 ENSODEG00000007386 ENSODEG00000008496 ENSODEG00000007187 CFAP126 (ENSODEG00000006839) SDHC (ENSODEG00000008215) MPZ (ENSODEG00000008395) PCP4L1 (ENSODEG00000008404) NR1I3 (ENSODEG00000008562) TOMM40L (ENSODEG00000006761) APOA2 (ENSODEG00000007021) FCER1G (ENSODEG00000007489) NDUFS2 (ENSODEG00000007813) ADAMTS4 (ENSODEG00000011124) ENSODEG00000008124 ##22 B4GALT3 (ENSODEG00000008462) PPOX (ENSODEG00000007017) USP21 (ENSODEG00000010632) UFC1 (ENSODEG00000008078) DEDD (ENSODEG00000008446) NIT1 (ENSODEG00000008755) PFDN2 (ENSODEG00000007888) ENSODEG00000007376 KLHDC9 (ENSODEG00000008140) NECTIN4 (ENSODEG00000009227) ENSODEG00000012487 ENSODEG00000012848 TSTD1 (ENSODEG00000010923) ENSODEG00000008881 F11R (ENSODEG00000007564) Degu MODERN SPECIES 51 DNAH5 (ENSODEG00000015643) ENSODEG00000015511 CEP55 (ENSODEG00000015163) FFAR4 (ENSODEG00000016129) RBP4 (ENSODEG00000015640) PDE6C (ENSODEG00000015159) FRA10AC1 (ENSODEG00000016002) ENSODEG00000014890 LGI1 (ENSODEG00000015911) ENSODEG00000015909 SLC35G1 (ENSODEG00000016132) ENSODEG00000015694 ##22 PLCE1 (ENSODEG00000016086) NOC3L (ENSODEG00000015822) ENSODEG00000015684 ENSODEG00000015179 HELLS (ENSODEG00000015916) CYP2C18 (ENSODEG00000015439) ENSODEG00000020373 ENSODEG00000015492 ENSODEG00000015808 ENSODEG00000015364 SORBS1 (ENSODEG00000015885) ENSODEG00000015731 ALDH18A1 (ENSODEG00000015796) TCTN3 (ENSODEG00000015591) ENTPD1 (ENSODEG00000017035) Degu MODERN SPECIES 356 SLC6A9 (ENSODEG00000001483) CCDC24 (ENSODEG00000001255) B4GALT2 (ENSODEG00000002805) ATP6V0B (ENSODEG00000002795) DPH2 (ENSODEG00000002604) IPO13 (ENSODEG00000002581) ARTN (ENSODEG00000002533) ST3GAL3 (ENSODEG00000002472) ENSODEG00000002231 ##22 KDM4A (ENSODEG00000002177) PTPRF (ENSODEG00000003593) HYI (ENSODEG00000003277) SZT2 (ENSODEG00000002541) MED8 (ENSODEG00000002395) ELOVL1 (ENSODEG00000002280) CDC20 (ENSODEG00000002247) MPL (ENSODEG00000002358) TIE1 (ENSODEG00000002098) C1orf210 (ENSODEG00000002000) TMEM125 (ENSODEG00000018817) CFAP57 (ENSODEG00000001921) EBNA1BP2 (ENSODEG00000001868) ENSODEG00000018750 ENSODEG00000001842 Rodentia_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a ##22 Kangaroo rat MODERN SPECIES 355 Cc2d2b (ENSDORG00000028246) Ccnj (ENSDORG00000008265) Zfp518a (ENSDORG00000025759) Blnk (ENSDORG00000008045) Dntt (ENSDORG00000008047) Opalin (ENSDORG00000008050) Tll2 (ENSDORG00000008052) Tm9sf3 (ENSDORG00000008053) Pik3ap1 (ENSDORG00000003681) ENSDORG00000029222 ENSDORG00000026699 Slit1 (ENSDORG00000015380) Arhgap19 (ENSDORG00000012582) ENSDORG00000030156 Rrp12 (ENSDORG00000009199) Pgam1 (ENSDORG00000027733) ##22 Exosc1 (ENSDORG00000016528) Zdhhc16 (ENSDORG00000016530) Mms19 (ENSDORG00000016531) Ubtd1 (ENSDORG00000029750) Ankrd2 (ENSDORG00000016536) Hoga1 (ENSDORG00000016537) Morn4 (ENSDORG00000016540) Pi4k2a (ENSDORG00000002269) Avpi1 (ENSDORG00000028399) Marveld1 (ENSDORG00000002279) Zfyve27 (ENSDORG00000008178) Sfrp5 (ENSDORG00000008180) Golga7b (ENSDORG00000015475) Crtac1 (ENSDORG00000015477) ENSDORG00000024055 Myomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a ##22 Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.k ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.k ##22 Prairie vole MODERN SPECIES 82 Lmntd1 (ENSMOCG00000008486) Kras (ENSMOCG00000011313) Etfrf1 (ENSMOCG00000000926) Casc1 (ENSMOCG00000010336) Irag2 (ENSMOCG00000001897) Bcat1 (ENSMOCG00000018342) Sox5 (ENSMOCG00000003982) Etnk1 (ENSMOCG00000015568) C2cd5 (ENSMOCG00000005597) St8sia1 (ENSMOCG00000020160) Sult6b2 (ENSMOCG00000001915) Cmas (ENSMOCG00000021041) Abcc9 (ENSMOCG00000018016) Kcnj8 (ENSMOCG00000000081) Ldhb (ENSMOCG00000001380) ENSMOCG00000016666 ##22 Gys2 (ENSMOCG00000000198) Spx (ENSMOCG00000006172) Golt1b (ENSMOCG00000019088) Recql (ENSMOCG00000007093) Pyroxd1 (ENSMOCG00000002670) Iapp (ENSMOCG00000012346) ENSMOCG00000020797 ENSMOCG00000012882 ENSMOCG00000015685 ENSMOCG00000003164 Slco1b2 (ENSMOCG00000009708) Slco1c1 (ENSMOCG00000014209) Pde3a (ENSMOCG00000005904) ENSMOCG00000007837 Aebp2 (ENSMOCG00000005729) Cricetinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.k ##22 Chinese hamster chok1gshd MODERN SPECIES 1 ENSCGRG00001002366 ENSCGRG00001000944 Cox7c (ENSCGRG00001016442) ENSCGRG00001007486 Rasa1 (ENSCGRG00001024641) Ccnh (ENSCGRG00001024363) Tmem161b (ENSCGRG00001023931) Mef2c (ENSCGRG00001006934) ENSCGRG00001007435 ENSCGRG00001003095 Cetn3 (ENSCGRG00001000920) Mblac2 (ENSCGRG00001018393) ENSCGRG00001004958 Lysmd3 (ENSCGRG00001004064) ENSCGRG00001017247 ENSCGRG00001020880 ##22 ENSCGRG00001024885 Arrdc3 (ENSCGRG00001024801) ENSCGRG00001024656 Nr2f1 (ENSCGRG00001020383) Pou5f2 (ENSCGRG00001019940) Fam172a (ENSCGRG00001019984) ENSCGRG00001010369 2210408I21Rik (ENSCGRG00001009297) Slf1 (ENSCGRG00001007173) Mctp1 (ENSCGRG00001011214) ENSCGRG00001007825 Fam81b (ENSCGRG00001005643) Skic3 (ENSCGRG00001016182) Arsk (ENSCGRG00001019637) ENSCGRG00001010656 Cricetidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.l ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.l ##22 Prairie vole MODERN SPECIES 12 Abce1 (ENSMOCG00000013213) Otud4 (ENSMOCG00000012639) Smad1 (ENSMOCG00000002828) Mmaa (ENSMOCG00000000542) 1700011L22Rik (ENSMOCG00000010556) Zfp827 (ENSMOCG00000020399) ENSMOCG00000002657 Lsm6 (ENSMOCG00000020049) Slc10a7 (ENSMOCG00000007838) ENSMOCG00000017327 Pou4f2 (ENSMOCG00000014811) Ttc29 (ENSMOCG00000010925) ENSMOCG00000018841 ENSMOCG00000010337 Ednra (ENSMOCG00000017745) ENSMOCG00000016788 ##22 Rasd2 (ENSMOCG00000014090) Hmox1 (ENSMOCG00000005130) Tom1 (ENSMOCG00000010687) Hmgxb4 (ENSMOCG00000005178) Cricetinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.a.l ##22 Golden Hamster MODERN SPECIES 634 Srfbp1 (ENSMAUG00000009431) Lox (ENSMAUG00000008060) 1700034E13Rik (ENSMAUG00000007545) Gykl1 (ENSMAUG00000005428) ENSMAUG00000004463 Snx2 (ENSMAUG00000018379) Dpep3 (ENSMAUG00000017410) ENSMAUG00000017250 Snx24 (ENSMAUG00000017166) Ppic (ENSMAUG00000016808) Prdm6 (ENSMAUG00000016287) Cep120 (ENSMAUG00000016424) Csnk1g3 (ENSMAUG00000015117) Zfp608 (ENSMAUG00000014536) ENSMAUG00000013888 ENSMAUG00000014738 ##22 Gramd3 (ENSMAUG00000012430) Aldh7a1 (ENSMAUG00000001614) Phax (ENSMAUG00000014638) Tex43 (ENSMAUG00000013359) Lmnb1 (ENSMAUG00000010471) Marchf3 (ENSMAUG00000012056) C330018D20Rik (ENSMAUG00000011803) Megf10 (ENSMAUG00000004517) Prrc1 (ENSMAUG00000011136) Ctxn3 (ENSMAUG00000010112) Ccdc192 (ENSMAUG00000011938) Slc12a2 (ENSMAUG00000009760) Fbn2 (ENSMAUG00000009747) Slc27a6 (ENSMAUG00000019470) Isoc1 (ENSMAUG00000017533) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 64 Ccar1 (ENSJJAG00000024055) Tet1 (ENSJJAG00000023109) Slc25a16 (ENSJJAG00000019315) Dna2 (ENSJJAG00000021501) ENSJJAG00000022466 ENSJJAG00000022736 ENSJJAG00000018983 Atoh7 (ENSJJAG00000014782) Mypn (ENSJJAG00000007229) Herc4 (ENSJJAG00000016624) Sirt1 (ENSJJAG00000021678) ENSJJAG00000011610 Lrrtm3 (ENSJJAG00000017094) Ctnna3 (ENSJJAG00000018409) Reep3 (ENSJJAG00000017116) ENSJJAG00000004728 ##22 Jmjd1c (ENSJJAG00000023295) Nrbf2 (ENSJJAG00000000936) ENSJJAG00000021676 Zfp365 (ENSJJAG00000019674) Rtkn2 (ENSJJAG00000019121) Arid5b (ENSJJAG00000001974) Cabcoco1 (ENSJJAG00000023473) Tmem26 (ENSJJAG00000010064) ENSJJAG00000018107 ENSJJAG00000018248 ENSJJAG00000015480 ENSJJAG00000017885 ENSJJAG00000016045 Ccdc6 (ENSJJAG00000000385) Slc16a9 (ENSJJAG00000014368) Lesser Egyptian jerboa MODERN SPECIES 179 Aldh18a1 (ENSJJAG00000015332) Tctn3 (ENSJJAG00000014982) Entpd1 (ENSJJAG00000014493) Cc2d2b (ENSJJAG00000009099) ENSJJAG00000022402 Blnk (ENSJJAG00000017943) Dntt (ENSJJAG00000022684) Tll2 (ENSJJAG00000007261) Tm9sf3 (ENSJJAG00000000058) Pik3ap1 (ENSJJAG00000012258) ENSJJAG00000010901 ENSJJAG00000006963 Slit1 (ENSJJAG00000021868) Arhgap19 (ENSJJAG00000012736) Rrp12 (ENSJJAG00000000110) ENSJJAG00000015130 ##22 Exosc1 (ENSJJAG00000013311) Zdhhc16 (ENSJJAG00000011384) Mms19 (ENSJJAG00000016216) Ubtd1 (ENSJJAG00000013950) Ankrd2 (ENSJJAG00000013600) Hoga1 (ENSJJAG00000013267) Morn4 (ENSJJAG00000013030) Pi4k2a (ENSJJAG00000021991) Avpi1 (ENSJJAG00000021703) Marveld1 (ENSJJAG00000012601) Zfyve27 (ENSJJAG00000005638) Sfrp5 (ENSJJAG00000022836) Golga7b (ENSJJAG00000021511) Crtac1 (ENSJJAG00000020645) ENSJJAG00000020251 Atlantogenata ANCESTRAL SPECIES 10 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Xenarthra ANCESTRAL SPECIES 23 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000165139.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Sloth MODERN SPECIES 5913 PGAM1 (ENSCHOG00000006467) ##22 EXOSC1 (ENSCHOG00000006477) ZDHHC16 (ENSCHOG00000006491) Armadillo DUPLICATION Armadillo MODERN SPECIES 1646 BCOR (ENSDNOG00000038847) ENSDNOG00000025629 ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1432 BLNK (ENSDNOG00000003737) DNTT (ENSDNOG00000003744) OPALIN (ENSDNOG00000033233) TLL2 (ENSDNOG00000003754) TM9SF3 (ENSDNOG00000035398) PIK3AP1 (ENSDNOG00000011360) LCOR (ENSDNOG00000024156) ENSDNOG00000032782 ENSDNOG00000018004 SLIT1 (ENSDNOG00000015506) ENSDNOG00000047969 ARHGAP19 (ENSDNOG00000034625) FRAT1 (ENSDNOG00000038953) ENSDNOG00000034994 RRP12 (ENSDNOG00000005120) ENSDNOG00000006685 ##22 EXOSC1 (ENSDNOG00000007983) ZDHHC16 (ENSDNOG00000006690) MMS19 (ENSDNOG00000006707) UBTD1 (ENSDNOG00000049344) ANKRD2 (ENSDNOG00000001240) HOGA1 (ENSDNOG00000001243) C10orf62 (ENSDNOG00000036266) MORN4 (ENSDNOG00000032778) PI4K2A (ENSDNOG00000017724) AVPI1 (ENSDNOG00000044043) MARVELD1 (ENSDNOG00000008327) ZFYVE27 (ENSDNOG00000019918) SFRP5 (ENSDNOG00000032287) GOLGA7B (ENSDNOG00000033712) CRTAC1 (ENSDNOG00000007658) Armadillo MODERN SPECIES 355 STPG4 (ENSDNOG00000039454) TTC7A (ENSDNOG00000045960) MCFD2 (ENSDNOG00000032663) SOCS5 (ENSDNOG00000020011) CRIPT (ENSDNOG00000035515) PIGF (ENSDNOG00000041519) RHOQ (ENSDNOG00000047538) ATP6V1E2 (ENSDNOG00000007277) TMEM247 (ENSDNOG00000042102) EPAS1 (ENSDNOG00000005938) PRKCE (ENSDNOG00000048651) ENSDNOG00000038824 SRBD1 (ENSDNOG00000018686) SIX2 (ENSDNOG00000018725) CAMKMT (ENSDNOG00000044307) ENSDNOG00000000193 ##22 ENSDNOG00000012230 PREPL (ENSDNOG00000025378) ENSDNOG00000046304 SLC3A1 (ENSDNOG00000031447) ENSDNOG00000034472 PPM1B (ENSDNOG00000009468) ENSDNOG00000012594 ABCG8 (ENSDNOG00000049689) ABCG5 (ENSDNOG00000012558) C1GALT1C1L (ENSDNOG00000032389) PLEKHH2 (ENSDNOG00000012497) THADA (ENSDNOG00000012440) ZFP36L2 (ENSDNOG00000043725) Eutheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Euarchontoglires DUPLICATION Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Lagomorpha ANCESTRAL SPECIES 17 ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00390000007081.b ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.a ##22 ENSGT00390000015287.h ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049709 ENSGT00390000013298 Rabbit MODERN SPECIES 9 SORBS1 (ENSOCUG00000013647) ALDH18A1 (ENSOCUG00000005956) TCTN3 (ENSOCUG00000005964) ENSOCUG00000024251 ENTPD1 (ENSOCUG00000012677) CC2D2B (ENSOCUG00000011118) CCNJ (ENSOCUG00000011114) ZNF518A (ENSOCUG00000015638) BLNK (ENSOCUG00000002864) DNTT (ENSOCUG00000002871) OPALIN (ENSOCUG00000002880) TLL2 (ENSOCUG00000002883) LCOR (ENSOCUG00000029435) SLIT1 (ENSOCUG00000003676) ARHGAP19 (ENSOCUG00000021497) ENSOCUG00000005679 ##22 FRAT1 (ENSOCUG00000005650) RRP12 (ENSOCUG00000005662) ENSOCUG00000011898 ZDHHC16 (ENSOCUG00000000595) MMS19 (ENSOCUG00000007776) UBTD1 (ENSOCUG00000007789) ANKRD2 (ENSOCUG00000007793) HOGA1 (ENSOCUG00000007799) MORN4 (ENSOCUG00000007810) PI4K2A (ENSOCUG00000007814) AVPI1 (ENSOCUG00000007821) MARVELD1 (ENSOCUG00000025329) ZFYVE27 (ENSOCUG00000001352) SFRP5 (ENSOCUG00000021137) GOLGA7B (ENSOCUG00000017860) Rodentia ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Degu MODERN SPECIES 66 UBE2E3 (ENSODEG00000012934) ITGA4 (ENSODEG00000011915) ENSODEG00000012379 CERKL (ENSODEG00000012012) NEUROD1 (ENSODEG00000019934) ITPRID2 (ENSODEG00000011169) PPP1R1C (ENSODEG00000012042) PDE1A (ENSODEG00000011693) DNAJC10 (ENSODEG00000011257) FRZB (ENSODEG00000011697) NCKAP1 (ENSODEG00000012291) DUSP19 (ENSODEG00000012741) ENSODEG00000011202 ENSODEG00000011356 ENSODEG00000010656 ##22 ZNF804A (ENSODEG00000011236) FSIP2 (ENSODEG00000011670) ENSODEG00000011277 ZC3H15 (ENSODEG00000010533) ITGAV (ENSODEG00000013327) ENSODEG00000019974 FAM171B (ENSODEG00000011840) ZSWIM2 (ENSODEG00000010673) CALCRL (ENSODEG00000014219) GULP1 (ENSODEG00000010757) COL3A1 (ENSODEG00000010707) COL5A2 (ENSODEG00000010110) ENSODEG00000019830 ENSODEG00000009648 ENSODEG00000019783 Rodentia_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Cricetidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 86 Lrrn4 (ENSMOCG00000011080) Crls1 (ENSMOCG00000006111) Mcm8 (ENSMOCG00000015893) Trmt6 (ENSMOCG00000022320) Chgb (ENSMOCG00000001424) Shld1 (ENSMOCG00000005816) Gpcpd1 (ENSMOCG00000013354) Prokr2 (ENSMOCG00000012413) Cds2 (ENSMOCG00000015701) Pcna (ENSMOCG00000019613) Tmem230 (ENSMOCG00000019540) Slc23a2 (ENSMOCG00000021732) Rassf2 (ENSMOCG00000000426) Prnd (ENSMOCG00000022573) Prnp (ENSMOCG00000003173) ENSMOCG00000021022 ##22 Adra1d (ENSMOCG00000006284) Smox (ENSMOCG00000011648) Rnf24 (ENSMOCG00000008073) Pank2 (ENSMOCG00000015823) Mavs (ENSMOCG00000022480) Ap5s1 (ENSMOCG00000007406) Cdc25b (ENSMOCG00000000383) Cenpb (ENSMOCG00000006748) Spef1 (ENSMOCG00000016870) 1700037H04Rik (ENSMOCG00000002686) Hspa12b (ENSMOCG00000020638) Siglec1 (ENSMOCG00000013504) Adam33 (ENSMOCG00000022885) Gfra4 (ENSMOCG00000020802) Atrn (ENSMOCG00000000501) Prairie vole MODERN SPECIES 80 ENSMOCG00000001406 Gpr52 (ENSMOCG00000007360) Rabgap1l (ENSMOCG00000007533) ENSMOCG00000009195 Rc3h1 (ENSMOCG00000016587) ENSMOCG00000014126 Serpinc1 (ENSMOCG00000019599) Zbtb37 (ENSMOCG00000005828) Dars2 (ENSMOCG00000020112) Cenpl (ENSMOCG00000015725) ENSMOCG00000005640 Ankrd45 (ENSMOCG00000021366) ENSMOCG00000011324 Tnfsf4 (ENSMOCG00000016434) Tnfsf18 (ENSMOCG00000021434) ENSMOCG00000022063 ##22 Fasl (ENSMOCG00000002112) Suco (ENSMOCG00000005241) 4930558K02Rik (ENSMOCG00000000623) Pigc (ENSMOCG00000003546) Dnm3 (ENSMOCG00000020210) ENSMOCG00000008821 ENSMOCG00000008075 Mettl13 (ENSMOCG00000011261) Vamp4 (ENSMOCG00000015230) Myoc (ENSMOCG00000011618) Myocos (ENSMOCG00000013431) ENSMOCG00000021278 ENSMOCG00000012732 ENSMOCG00000013255 Fmo4 (ENSMOCG00000018998) Primates ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Marmoset MODERN SPECIES 21 PLEKHG6 (ENSCJAG00000000666) CD9 (ENSCJAG00000000659) VWF (ENSCJAG00000000613) ANO2 (ENSCJAG00000000606) NTF3 (ENSCJAG00000000605) KCNA5 (ENSCJAG00000068399) KCNA1 (ENSCJAG00000068371) KCNA6 (ENSCJAG00000061475) ENSCJAG00000075610 ENSCJAG00000001647 ENSCJAG00000001628 FGF6 (ENSCJAG00000001613) FGF23 (ENSCJAG00000069632) TIGAR (ENSCJAG00000040111) CCND2 (ENSCJAG00000001593) ENSCJAG00000001586 ##22 ENSCJAG00000021822 PARP11 (ENSCJAG00000001570) ENSCJAG00000082222 CRACR2A (ENSCJAG00000018917) ENSCJAG00000063173 PRMT8 (ENSCJAG00000018891) ENSCJAG00000018882 TEAD4 (ENSCJAG00000018796) ENSCJAG00000085073 FOXM1 (ENSCJAG00000018781) RHNO1 (ENSCJAG00000018790) TEX52 (ENSCJAG00000018779) NRIP2 (ENSCJAG00000083523) ITFG2 (ENSCJAG00000018765) FKBP4 (ENSCJAG00000018746) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1050 VIPR2 (ENSANAG00000024103) DYNC2I1 (ENSANAG00000030447) ESYT2 (ENSANAG00000019778) NCAPG2 (ENSANAG00000029627) ENSANAG00000026104 ENSANAG00000026862 ENSANAG00000029187 UBE3C (ENSANAG00000030081) MNX1 (ENSANAG00000031648) ENSANAG00000020425 ENSANAG00000021639 LMBR1 (ENSANAG00000026160) ENSANAG00000025885 ##22 RNF32 (ENSANAG00000035219) ENSANAG00000030048 RBM33 (ENSANAG00000032494) ENSANAG00000024223 EN2 (ENSANAG00000034609) INSIG1 (ENSANAG00000026708) HTR5A (ENSANAG00000027051) PAXIP1 (ENSANAG00000030136) DPP6 (ENSANAG00000023529) Mas night monkey MODERN SPECIES 349 PEX16 (ENSANAG00000024741) LARGE2 (ENSANAG00000024552) PHF21A (ENSANAG00000033662) ENSANAG00000034457 CREB3L1 (ENSANAG00000023783) DGKZ (ENSANAG00000023123) ENSANAG00000030861 CHRM4 (ENSANAG00000007361) AMBRA1 (ENSANAG00000037577) HARBI1 (ENSANAG00000038532) ATG13 (ENSANAG00000036615) ARHGAP1 (ENSANAG00000038289) ZNF408 (ENSANAG00000036294) F2 (ENSANAG00000036904) CKAP5 (ENSANAG00000031236) ENSANAG00000038320 ##22 LRP4 (ENSANAG00000038492) CSTPP1 (ENSANAG00000037882) ENSANAG00000026796 ARFGAP2 (ENSANAG00000031850) PACSIN3 (ENSANAG00000030038) DDB2 (ENSANAG00000036510) ACP2 (ENSANAG00000032696) NR1H3 (ENSANAG00000037990) MADD (ENSANAG00000024603) MYBPC3 (ENSANAG00000023289) SPI1 (ENSANAG00000029485) SLC39A13 (ENSANAG00000027448) ENSANAG00000037076 RAPSN (ENSANAG00000022248) CELF1 (ENSANAG00000031770) Catarrhini ANCESTRAL SPECIES 2 ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000018596.A.a.a ENSGT00390000005596 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000018596.A.a.a ENSGT00390000005596 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000018596.A.a.a ENSGT00390000005596 ENSGT00940000161421 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00390000014001.b ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000018596.A.a.a ENSGT00390000005596 Macaca ANCESTRAL SPECIES 5 ENSGT00390000014001.b ENSGT00440000033232.c.f ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00910000148533 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000018596.A.a.a ENSGT00390000005596 Pig-tailed macaque MODERN SPECIES 546 SETMAR (ENSMNEG00000045183) SUMF1 (ENSMNEG00000003566) ITPR1 (ENSMNEG00000034253) BHLHE40 (ENSMNEG00000038264) ARL8B (ENSMNEG00000029717) EDEM1 (ENSMNEG00000034041) ENSMNEG00000021998 GRM7 (ENSMNEG00000031784) LMCD1 (ENSMNEG00000039664) SSUH2 (ENSMNEG00000032764) CAV3 (ENSMNEG00000045110) OXTR (ENSMNEG00000037475) ENSMNEG00000027815 RAD18 (ENSMNEG00000013464) SRGAP3 (ENSMNEG00000028942) ENSMNEG00000032308 ##22 THUMPD3 (ENSMNEG00000030529) SETD5 (ENSMNEG00000045236) ENSMNEG00000026054 LHFPL4 (ENSMNEG00000032394) MTMR14 (ENSMNEG00000036145) CPNE9 (ENSMNEG00000032338) BRPF1 (ENSMNEG00000028158) OGG1 (ENSMNEG00000037925) CAMK1 (ENSMNEG00000036021) TADA3 (ENSMNEG00000034551) ENSMNEG00000045138 TTLL3 (ENSMNEG00000041644) RPUSD3 (ENSMNEG00000040308) CIDEC (ENSMNEG00000033573) JAGN1 (ENSMNEG00000030195) Hominoidea ANCESTRAL SPECIES 2 ENSGT00440000033232.c ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861.c ENSGT00940000157717 ENSGT01030000234648.a.a.d ENSGT00910000147697 ENSGT00940000158813 ENSGT00440000038003 ENSGT00950000183006.B.f.b.b ENSGT01050000244882.a.a.b ENSGT00910000147055 ENSGT00390000011230 ENSGT00950000182824.a.b.a ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00530000063557.a ENSGT00940000157446 ENSGT00990000203541.a.b ENSGT00390000018852 ENSGT00910000147469 ENSGT00940000159659 ENSGT00940000157794 ENSGT00640000091554 ENSGT00940000156378.b ENSGT00390000008947 ENSGT00390000016233 ENSGT00940000154857 ENSGT00940000161059 ENSGT00390000018596.A.a.a ENSGT00390000005596 Hominidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.a ##22 Pan ANCESTRAL SPECIES 22 ENSGT00940000156905 ENSGT00950000182899.B.a ENSGT00940000154927 ENSGT00530000063627.a ENSGT00940000157453 ENSGT00390000001394 ENSGT00940000154652.f ENSGT01030000234579.B.b ENSGT00940000159927 ENSGT00940000160889 ENSGT00940000161271 ENSGT00960000190786 ENSGT00390000016480 ENSGT00940000157953 ENSGT01000000214655 ENSGT00950000182926.b.d.c.b.a.a ##22 ENSGT00950000182950.B ENSGT00390000017146.b.e ENSGT00730000111351 Bonobo MODERN SPECIES 4 CUL4A (ENSPPAG00000034185) LAMP1 (ENSPPAG00000034963) ENSPPAG00000037417 ADPRHL1 (ENSPPAG00000003407) DCUN1D2 (ENSPPAG00000031617) TMCO3 (ENSPPAG00000035939) TFDP1 (ENSPPAG00000031115) ATP4B (ENSPPAG00000010621) GRK1 (ENSPPAG00000011431) ENSPPAG00000012872 GAS6 (ENSPPAG00000030726) ENSPPAG00000032641 C13orf46 (ENSPPAG00000031241) RASA3 (ENSPPAG00000032851) CFAP97D2 (ENSPPAG00000025104) ENSPPAG00000027566 ##22 CDC16 (ENSPPAG00000029807) UPF3A (ENSPPAG00000042267) CHAMP1 (ENSPPAG00000012131) Chimpanzee MODERN SPECIES 4 PCID2 (ENSPTRG00000006053) CUL4A (ENSPTRG00000006054) LAMP1 (ENSPTRG00000006055) GRTP1 (ENSPTRG00000006056) ADPRHL1 (ENSPTRG00000045938) DCUN1D2 (ENSPTRG00000006059) TMCO3 (ENSPTRG00000006060) TFDP1 (ENSPTRG00000048704) ATP4B (ENSPTRG00000006063) GRK1 (ENSPTRG00000006064) TMEM255B (ENSPTRG00000045155) ENSPTRG00000043183 C13H13orf46 (ENSPTRG00000047848) RASA3 (ENSPTRG00000006069) CFAP97D2 (ENSPTRG00000050483) ENSPTRG00000045939 ##22 CDC16 (ENSPTRG00000006072) UPF3A (ENSPTRG00000006073) CHAMP1 (ENSPTRG00000052016) Gibbon MODERN SPECIES 13 ITPR1 (ENSNLEG00000003382) ENSNLEG00000003704 ARL8B (ENSNLEG00000034641) EDEM1 (ENSNLEG00000003738) ENSNLEG00000036159 ENSNLEG00000032377 ENSNLEG00000003761 ENSNLEG00000034183 LMCD1 (ENSNLEG00000003766) SSUH2 (ENSNLEG00000003778) CAV3 (ENSNLEG00000003781) OXTR (ENSNLEG00000029699) ENSNLEG00000029940 RAD18 (ENSNLEG00000003789) SRGAP3 (ENSNLEG00000003842) ENSNLEG00000018950 ##22 THUMPD3 (ENSNLEG00000003863) SETD5 (ENSNLEG00000003896) LHFPL4 (ENSNLEG00000029860) ENSNLEG00000035746 MTMR14 (ENSNLEG00000003963) CPNE9 (ENSNLEG00000004055) BRPF1 (ENSNLEG00000004094) ENSNLEG00000004149 ENSNLEG00000035161 TADA3 (ENSNLEG00000004174) ARPC4 (ENSNLEG00000004196) ENSNLEG00000026984 RPUSD3 (ENSNLEG00000004214) CIDEC (ENSNLEG00000004221) JAGN1 (ENSNLEG00000004230) Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Primates ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000161027 ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00940000160285 ENSGT00930000151054 ENSGT00410000028887 ENSGT00940000165817 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155070.k.b ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00950000182926.b.d.c.b.a.b ##22 ENSGT00940000154524.a ENSGT00940000154276.hb.a.f ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.y.a.n.a ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000001738 ENSGT00530000064783 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000161992 ENSGT00940000161027 ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00940000160285 ENSGT00930000151054 ENSGT00410000028887 ENSGT00530000063721.B ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155070.k.b ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00950000182926.b.d.c.b.a.b ##22 ENSGT00940000154524.a ENSGT00940000154276.hb.a.f ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.y.a.n.a ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000001738 ENSGT00530000064783 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 Pan ANCESTRAL SPECIES 1 ENSGT00940000161992 ENSGT00940000161027 ENSGT00940000153370.a.a ENSGT00390000013169 ENSGT00940000160285 ENSGT00930000151054 ENSGT00410000028887 ENSGT00530000063721.B.i ENSGT00940000161002 ENSGT00940000162651 ENSGT00940000155070.k.b ENSGT00940000161776 ENSGT00390000016784 ENSGT00940000162438 ENSGT00940000159147 ENSGT00950000182926.b.d.c.b.a.b ##22 ENSGT00940000154524.a ENSGT00940000154276.hb.a.f ENSGT00940000157743 ENSGT00390000017253 ENSGT00390000007479.y.a.n.a ENSGT00390000017147 ENSGT00390000000417.a.a.b.a.a.b ENSGT00390000001738 ENSGT00530000064783 ENSGT00390000009753 ENSGT00390000010028 ENSGT01030000234598.b.b ENSGT00940000160988 ENSGT00940000160125 ENSGT00940000157941 Chimpanzee MODERN SPECIES 2 KCNK7 (ENSPTRG00000003885) EHBP1L1 (ENSPTRG00000003883) FAM89B (ENSPTRG00000003882) ZNRD2 (ENSPTRG00000003881) LTBP3 (ENSPTRG00000003880) SCYL1 (ENSPTRG00000003879) ENSPTRG00000049826 ENSPTRG00000044235 SLC25A45 (ENSPTRG00000003874) TIGD3 (ENSPTRG00000003873) DPF2 (ENSPTRG00000003872) CDC42EP2 (ENSPTRG00000051376) POLA2 (ENSPTRG00000003870) ENSPTRG00000052347 CAPN1 (ENSPTRG00000003869) ENSPTRG00000044015 ##22 SPDYC (ENSPTRG00000028537) ENSPTRG00000048485 SYVN1 (ENSPTRG00000003868) MRPL49 (ENSPTRG00000003867) FAU (ENSPTRG00000003866) ZNHIT2 (ENSPTRG00000003865) TM7SF2 (ENSPTRG00000003864) VPS51 (ENSPTRG00000003863) TMEM262 (ENSPTRG00000050805) ZFPL1 (ENSPTRG00000003861) CDCA5 (ENSPTRG00000003860) NAALADL1 (ENSPTRG00000003859) SAC3D1 (ENSPTRG00000003858) SNX15 (ENSPTRG00000003857) ARL2 (ENSPTRG00000034478) Bonobo MODERN SPECIES 2 KCNK7 (ENSPPAG00000040175) EHBP1L1 (ENSPPAG00000022447) ENSPPAG00000023660 ZNRD2 (ENSPPAG00000035017) LTBP3 (ENSPPAG00000036458) SCYL1 (ENSPPAG00000029818) ENSPPAG00000022234 ENSPPAG00000036161 SLC25A45 (ENSPPAG00000035170) TIGD3 (ENSPPAG00000001675) DPF2 (ENSPPAG00000043218) CDC42EP2 (ENSPPAG00000017994) POLA2 (ENSPPAG00000038067) ENSPPAG00000030242 CAPN1 (ENSPPAG00000027661) ENSPPAG00000036656 ##22 SPDYC (ENSPPAG00000039970) ENSPPAG00000025565 SYVN1 (ENSPPAG00000024469) MRPL49 (ENSPPAG00000037118) FAU (ENSPPAG00000040318) ZNHIT2 (ENSPPAG00000024364) TM7SF2 (ENSPPAG00000030405) VPS51 (ENSPPAG00000026847) TMEM262 (ENSPPAG00000041718) ZFPL1 (ENSPPAG00000019581) CDCA5 (ENSPPAG00000027263) NAALADL1 (ENSPPAG00000043800) ENSPPAG00000041034 SNX15 (ENSPPAG00000036705) ARL2 (ENSPPAG00000041696) Gorilla MODERN SPECIES 2 KCNK7 (ENSGGOG00000011766) EHBP1L1 (ENSGGOG00000011754) FAM89B (ENSGGOG00000011751) ZNRD2 (ENSGGOG00000011746) LTBP3 (ENSGGOG00000000714) SCYL1 (ENSGGOG00000000712) ENSGGOG00000025059 FRMD8 (ENSGGOG00000014773) SLC25A45 (ENSGGOG00000014767) TIGD3 (ENSGGOG00000014762) DPF2 (ENSGGOG00000026412) CDC42EP2 (ENSGGOG00000038944) POLA2 (ENSGGOG00000003056) ENSGGOG00000007767 CAPN1 (ENSGGOG00000007754) ENSGGOG00000022894 ##22 SPDYC (ENSGGOG00000004263) ENSGGOG00000024036 SYVN1 (ENSGGOG00000002718) MRPL49 (ENSGGOG00000024514) FAU (ENSGGOG00000002714) ZNHIT2 (ENSGGOG00000002712) TM7SF2 (ENSGGOG00000002708) VPS51 (ENSGGOG00000002704) TMEM262 (ENSGGOG00000041966) ZFPL1 (ENSGGOG00000002697) CDCA5 (ENSGGOG00000026067) NAALADL1 (ENSGGOG00000002695) SAC3D1 (ENSGGOG00000024890) SNX15 (ENSGGOG00000010421) ARL2 (ENSGGOG00000005254) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000154245.B ENSGT00900000143503 ENSGT00940000154713.B ENSGT00390000018121 ENSGT00940000156728 ENSGT00940000157103 ENSGT00940000157059 ENSGT00940000156074 ENSGT00940000160022 ENSGT00940000160857 ENSGT00940000155951.b ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a ENSGT00950000182926.b.d.c.b.a.b.a ##22 ENSGT00530000063690.a.b.a.a ENSGT00530000063690.a.b.a.b.c ENSGT00510000048509 ENSGT00940000156935 ENSGT00390000014817 ENSGT00390000008110 ENSGT00390000013532 ENSGT00940000153284.b ENSGT00870000136875 ENSGT00940000158643 ENSGT00390000011192 ENSGT01080000257472 ENSGT00940000158757 ENSGT00940000154326.a.a.h.a.a ENSGT00390000003601.b Mas night monkey MODERN SPECIES 469 GABRB1 (ENSANAG00000026324) ENSANAG00000025231 COMMD8 (ENSANAG00000019583) ATP10D (ENSANAG00000026040) ENSANAG00000020160 CORIN (ENSANAG00000024072) NFXL1 (ENSANAG00000021407) CNGA1 (ENSANAG00000026609) NIPAL1 (ENSANAG00000022393) TXK (ENSANAG00000031213) TEC (ENSANAG00000035862) SLAIN2 (ENSANAG00000020742) SLC10A4 (ENSANAG00000029030) ZAR1 (ENSANAG00000035179) FRYL (ENSANAG00000030260) ENSANAG00000027091 ##22 OCIAD1 (ENSANAG00000037176) OCIAD2 (ENSANAG00000033240) CWH43 (ENSANAG00000036936) DCUN1D4 (ENSANAG00000006089) LRRC66 (ENSANAG00000027871) SGCB (ENSANAG00000037522) SPATA18 (ENSANAG00000024358) USP46 (ENSANAG00000037399) RASL11B (ENSANAG00000030414) ENSANAG00000036362 ENSANAG00000027223 SCFD2 (ENSANAG00000037492) ENSANAG00000032461 LNX1 (ENSANAG00000028251) ENSANAG00000037095 Cebidae ANCESTRAL SPECIES 4 ENSGT00940000154245.B ENSGT00900000143503 ENSGT00940000154713.B ENSGT00390000018121 ENSGT00940000156728 ENSGT00940000157103 ENSGT00940000157059 ENSGT00940000156074 ENSGT00940000160022 ENSGT00940000160857 ENSGT00940000155951.b ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a ENSGT00950000182926.b.d.c.b.a.b.a ##22 ENSGT00530000063690.a.b.a.a ENSGT00530000063690.a.b.a.b.c ENSGT00510000048509 ENSGT00940000156935 ENSGT00390000014817 ENSGT00390000008110 ENSGT00390000013532 ENSGT00940000153284.b ENSGT00870000136875 ENSGT00940000158643 ENSGT00390000011192 ENSGT01080000257472 ENSGT00940000158757 ENSGT00940000154326.a.a.h.a.a ENSGT00390000003601.b Cebidae_a ANCESTRAL SPECIES 63 ENSGT00940000159024 ENSGT00940000154245.B ENSGT00900000143503 ENSGT00390000018121 ENSGT00940000156728 ENSGT00940000157103 ENSGT00940000157059 ENSGT00940000156074 ENSGT00940000160022 ENSGT00940000160857 ENSGT00940000155951.b ENSGT00390000017860.b ENSGT00950000182808.a.a.b.b ENSGT00390000012305.a ENSGT00610000086058.a ENSGT00950000182926.b.d.c.b.a.b.a ##22 ENSGT00530000063690.a.b.a.a ENSGT00530000063690.a.b.a.b.c ENSGT00510000048509 ENSGT00940000156935 ENSGT00390000014817 ENSGT00390000008110 ENSGT00390000013532 ENSGT00940000153284.b.g ENSGT00940000158643 ENSGT00390000011192 ENSGT01080000257472 ENSGT00940000158757 ENSGT00940000154326.a.a.h.a.a ENSGT00390000003601.b ENSGT00940000156043 Capuchin MODERN SPECIES 124 GABRB1 (ENSCCAG00000031056) ENSCCAG00000021015 COMMD8 (ENSCCAG00000037718) ATP10D (ENSCCAG00000032623) CORIN (ENSCCAG00000036055) NFXL1 (ENSCCAG00000035844) CNGA1 (ENSCCAG00000027342) NIPAL1 (ENSCCAG00000032859) TXK (ENSCCAG00000017733) TEC (ENSCCAG00000034761) ENSCCAG00000021799 SLAIN2 (ENSCCAG00000008869) SLC10A4 (ENSCCAG00000037459) ENSCCAG00000034311 FRYL (ENSCCAG00000034554) ENSCCAG00000037817 ##22 OCIAD1 (ENSCCAG00000025450) OCIAD2 (ENSCCAG00000031065) CWH43 (ENSCCAG00000020925) DCUN1D4 (ENSCCAG00000016912) LRRC66 (ENSCCAG00000037453) SGCB (ENSCCAG00000012614) SPATA18 (ENSCCAG00000020113) ENSCCAG00000030356 ENSCCAG00000032234 RASL11B (ENSCCAG00000037560) ENSCCAG00000031404 ENSCCAG00000030526 ENSCCAG00000023197 SCFD2 (ENSCCAG00000031373) FIP1L1 (ENSCCAG00000021687) Platyrrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b.b ##22 Mas night monkey MODERN SPECIES 896 BRWD3 (ENSANAG00000008738) ENSANAG00000026677 ENSANAG00000020981 TBX22 (ENSANAG00000021162) ENSANAG00000029835 ITM2A (ENSANAG00000036156) GPR174 (ENSANAG00000019966) P2RY10 (ENSANAG00000020031) LPAR4 (ENSANAG00000020241) ENSANAG00000035162 ENSANAG00000024359 ENSANAG00000033757 TAF9B (ENSANAG00000036258) PGK1 (ENSANAG00000024705) ATP7A (ENSANAG00000023455) ENSANAG00000022195 ##22 COX7B (ENSANAG00000022390) MAGT1 (ENSANAG00000030919) ATRX (ENSANAG00000032142) ENSANAG00000027335 FGF16 (ENSANAG00000037272) MAGEE1 (ENSANAG00000037886) PBDC1 (ENSANAG00000018001) ZDHHC15 (ENSANAG00000023886) UPRT (ENSANAG00000030692) ABCB7 (ENSANAG00000031764) NEXMIF (ENSANAG00000024438) RLIM (ENSANAG00000021696) SLC16A2 (ENSANAG00000031908) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.a.b ##22 Lesser Egyptian jerboa MODERN SPECIES 88 ENSJJAG00000014774 Lrrc2 (ENSJJAG00000012595) ENSJJAG00000023493 Als2cl (ENSJJAG00000017612) Prss46 (ENSJJAG00000021613) Prss45 (ENSJJAG00000019524) ENSJJAG00000014988 ENSJJAG00000012384 Myl3 (ENSJJAG00000021882) Pth1r (ENSJJAG00000020640) Ccdc12 (ENSJJAG00000014918) Nbeal2 (ENSJJAG00000018112) Nradd (ENSJJAG00000008456) ENSJJAG00000000233 Setd2 (ENSJJAG00000022758) ENSJJAG00000014043 ##22 Kif9 (ENSJJAG00000004798) Klhl18 (ENSJJAG00000022221) Ngp (ENSJJAG00000019896) Ptpn23 (ENSJJAG00000023111) ENSJJAG00000012176 ENSJJAG00000011308 ENSJJAG00000018014 Cspg5 (ENSJJAG00000011976) ENSJJAG00000022882 ENSJJAG00000009892 ENSJJAG00000023311 ENSJJAG00000010648 ENSJJAG00000013858 Cdc25a (ENSJJAG00000005624) Camp (ENSJJAG00000020763) Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Marmotini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Arctic ground squirrel MODERN SPECIES 293 TRMT10C (ENSUPAG00010020476) ENSUPAG00010020479 ZBTB11 (ENSUPAG00010020492) RPL24 (ENSUPAG00010020498) CEP97 (ENSUPAG00010020505) NXPE3 (ENSUPAG00010020518) NFKBIZ (ENSUPAG00010020526) ENSUPAG00010020562 ##22 ZPLD1 (ENSUPAG00010020567) Hystricomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Naked mole-rat female MODERN SPECIES 23 FNDC9 (ENSHGLG00000035156) CYFIP2 (ENSHGLG00000013823) ITK (ENSHGLG00000018493) GARIN3 (ENSHGLG00000016204) ENSHGLG00000021195 ENSHGLG00000014147 ENSHGLG00000046979 ENSHGLG00000017927 ENSHGLG00000042356 ENSHGLG00000041626 SGCD (ENSHGLG00000014518) ENSHGLG00000043124 MRPL22 (ENSHGLG00000018496) GEMIN5 (ENSHGLG00000013629) CNOT8 (ENSHGLG00000039848) ENSHGLG00000044881 ##22 ENSHGLG00000047467 ENSHGLG00000050510 LARP1 (ENSHGLG00000006267) HAND1 (ENSHGLG00000008657) SAP30L (ENSHGLG00000040967) GALNT10 (ENSHGLG00000011151) MFAP3 (ENSHGLG00000012228) FAM114A2 (ENSHGLG00000005817) GRIA1 (ENSHGLG00000008564) ENSHGLG00000049292 ENSHGLG00000040393 NMUR2 (ENSHGLG00000016664) ENSHGLG00000046430 GLRA1 (ENSHGLG00000016730) G3BP1 (ENSHGLG00000014921) Rodentia_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.a ##22 Golden Hamster MODERN SPECIES 617 Cc2d2b (ENSMAUG00000020785) Ccnj (ENSMAUG00000021828) Zfp518a (ENSMAUG00000021731) Blnk (ENSMAUG00000021912) Dntt (ENSMAUG00000020553) Opalin (ENSMAUG00000019374) Tll2 (ENSMAUG00000003237) Tm9sf3 (ENSMAUG00000020867) Pik3ap1 (ENSMAUG00000021883) ENSMAUG00000021613 Lcor (ENSMAUG00000019331) Slit1 (ENSMAUG00000002133) Arhgap19 (ENSMAUG00000020627) ENSMAUG00000018859 Rrp12 (ENSMAUG00000020743) ENSMAUG00000021727 ##22 ENSMAUG00000020462 Zdhhc16 (ENSMAUG00000020857) Mms19 (ENSMAUG00000021095) Ubtd1 (ENSMAUG00000019537) Ankrd2 (ENSMAUG00000018303) 4933411K16Rik (ENSMAUG00000017996) Hoga1 (ENSMAUG00000021216) Morn4 (ENSMAUG00000019301) Pi4k2a (ENSMAUG00000018850) Avpi1 (ENSMAUG00000020844) Marveld1 (ENSMAUG00000020397) Zfyve27 (ENSMAUG00000020339) Sfrp5 (ENSMAUG00000019322) Golga7b (ENSMAUG00000019120) Crtac1 (ENSMAUG00000019399) Cricetidae_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.a ##22 Prairie vole MODERN SPECIES 16 Zfp518a (ENSMOCG00000007078) Blnk (ENSMOCG00000015343) Dntt (ENSMOCG00000018899) Opalin (ENSMOCG00000009465) Tll2 (ENSMOCG00000014816) Tm9sf3 (ENSMOCG00000017499) Pik3ap1 (ENSMOCG00000019863) ENSMOCG00000016297 Lcor (ENSMOCG00000022456) Slit1 (ENSMOCG00000010266) Arhgap19 (ENSMOCG00000011553) ENSMOCG00000021597 ENSMOCG00000001977 Frat2 (ENSMOCG00000001178) Rrp12 (ENSMOCG00000006753) ENSMOCG00000003968 ##22 ENSMOCG00000006004 Zdhhc16 (ENSMOCG00000010918) ENSMOCG00000015241 Ubtd1 (ENSMOCG00000004869) Ankrd2 (ENSMOCG00000005548) Hoga1 (ENSMOCG00000008769) Morn4 (ENSMOCG00000011013) Pi4k2a (ENSMOCG00000012623) Avpi1 (ENSMOCG00000012593) Marveld1 (ENSMOCG00000013119) Zfyve27 (ENSMOCG00000014672) Sfrp5 (ENSMOCG00000017190) Golga7b (ENSMOCG00000018394) Crtac1 (ENSMOCG00000021947) ENSMOCG00000019358 Cricetidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.b ##22 Cricetinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.b ##22 Golden Hamster MODERN SPECIES 730 Myo1f (ENSMAUG00000002414) Adamts10 (ENSMAUG00000012826) Actl9 (ENSMAUG00000004280) ENSMAUG00000017033 ENSMAUG00000012218 ENSMAUG00000017172 Pot1b (ENSMAUG00000020767) Adgre4 (ENSMAUG00000008688) ENSMAUG00000007845 Adgre1 (ENSMAUG00000000651) Vav1 (ENSMAUG00000021145) Trip10 (ENSMAUG00000005828) ENSMAUG00000020000 C3 (ENSMAUG00000013599) Tnfsf14 (ENSMAUG00000020967) ENSMAUG00000015229 ##22 Cd70 (ENSMAUG00000019101) ENSMAUG00000021205 Tubb4a (ENSMAUG00000017901) Dennd1c (ENSMAUG00000006409) Crb3 (ENSMAUG00000019988) ENSMAUG00000000871 Slc25a41 (ENSMAUG00000014724) Khsrp (ENSMAUG00000018966) Gm17949 (ENSMAUG00000018260) ENSMAUG00000015346 Pspn (ENSMAUG00000019121) Alkbh7 (ENSMAUG00000000800) Clpp (ENSMAUG00000021469) Acer1 (ENSMAUG00000012781) Mllt1 (ENSMAUG00000011374) Lesser Egyptian jerboa MODERN SPECIES 81 ENSJJAG00000013742 ENSJJAG00000007203 Ephb6 (ENSJJAG00000015598) Trpv6 (ENSJJAG00000010273) Trpv5 (ENSJJAG00000020226) Tas2r144 (ENSJJAG00000017432) ENSJJAG00000012066 Tmem139 (ENSJJAG00000014062) Casp2 (ENSJJAG00000008256) Zyx (ENSJJAG00000016066) Epha1 (ENSJJAG00000021813) ENSJJAG00000010770 Tcaf1 (ENSJJAG00000020805) Or6b1 (ENSJJAG00000016325) Nobox (ENSJJAG00000017542) ENSJJAG00000002419 ##22 ENSJJAG00000005242 ENSJJAG00000024312 ENSJJAG00000003559 Ezh2 (ENSJJAG00000014722) Primates ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Coquerels sifaka MODERN SPECIES 743 PRRG3 (ENSPCOG00000023165) VMA21 (ENSPCOG00000028336) GPR50 (ENSPCOG00000027251) ENSPCOG00000014562 ##22 ENSPCOG00000023929 CD99L2 (ENSPCOG00000015996) MTMR1 (ENSPCOG00000019778) MTM1 (ENSPCOG00000017319) MAMLD1 (ENSPCOG00000019557) ENSPCOG00000025016 TMEM185A (ENSPCOG00000020150) ENSPCOG00000017118 Haplorrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b ##22 Tarsier MODERN SPECIES 4870 CDK12 (ENSTSYG00000009800) MED1 (ENSTSYG00000029543) ENSTSYG00000036215 ##22 Simiiformes DUPLICATION Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a ##22 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Drill MODERN SPECIES 226 ENTPD1 (ENSMLEG00000032678) ENSMLEG00000031797 CC2D2B (ENSMLEG00000041340) CCNJ (ENSMLEG00000021833) ZNF518A (ENSMLEG00000020642) BLNK (ENSMLEG00000037312) DNTT (ENSMLEG00000041343) OPALIN (ENSMLEG00000028586) TLL2 (ENSMLEG00000042598) TM9SF3 (ENSMLEG00000032756) PIK3AP1 (ENSMLEG00000036975) LCOR (ENSMLEG00000017762) SLIT1 (ENSMLEG00000039609) ARHGAP19 (ENSMLEG00000037965) RRP12 (ENSMLEG00000041317) ENSMLEG00000040909 ##22 EXOSC1 (ENSMLEG00000027643) ZDHHC16 (ENSMLEG00000044387) MMS19 (ENSMLEG00000043890) UBTD1 (ENSMLEG00000039442) ANKRD2 (ENSMLEG00000032656) PI4K2A (ENSMLEG00000032830) MORN4 (ENSMLEG00000031488) AVPI1 (ENSMLEG00000031158) ZFYVE27 (ENSMLEG00000032971) GOLGA7B (ENSMLEG00000025571) CRTAC1 (ENSMLEG00000018903) R3HCC1L (ENSMLEG00000044088) LOXL4 (ENSMLEG00000039866) PYROXD2 (ENSMLEG00000027593) HPS1 (ENSMLEG00000035442) Olive baboon MODERN SPECIES 7 MAFB (ENSPANG00000016615) TOP1 (ENSPANG00000025552) PLCG1 (ENSPANG00000023857) ZHX3 (ENSPANG00000023855) LPIN3 (ENSPANG00000010914) EMILIN3 (ENSPANG00000020628) CHD6 (ENSPANG00000025554) ENSPANG00000037008 PTPRT (ENSPANG00000010915) ENSPANG00000041815 SRSF6 (ENSPANG00000035224) L3MBTL1 (ENSPANG00000026135) SGK2 (ENSPANG00000003908) IFT52 (ENSPANG00000021782) MYBL2 (ENSPANG00000023992) ENSPANG00000010304 ##22 TOX2 (ENSPANG00000023990) JPH2 (ENSPANG00000023989) OSER1 (ENSPANG00000022564) GDAP1L1 (ENSPANG00000022715) FITM2 (ENSPANG00000022713) R3HDML (ENSPANG00000030933) HNF4A (ENSPANG00000026281) TTPAL (ENSPANG00000026279) SERINC3 (ENSPANG00000024778) PKIG (ENSPANG00000022565) ADA (ENSPANG00000023202) CCN5 (ENSPANG00000021786) KCNK15 (ENSPANG00000024499) RIMS4 (ENSPANG00000000384) YWHAB (ENSPANG00000004093) Rhinopithecus ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.a ##22 Black snub-nosed monkey MODERN SPECIES 1850 ENSRBIG00000010479 ENSRBIG00000034597 TNFAIP3 (ENSRBIG00000034026) ENSRBIG00000025427 ##22 Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000158773 ENSGT00940000160583 ENSGT00910000146870 ENSGT00940000156205 ENSGT00940000170417 ENSGT00940000157771 ENSGT01020000230401.b.a.m.a ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00940000160523 ENSGT00910000146810 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00940000156291 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00940000157160.e ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT00940000153052.c.b.b.a.b ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156876.k.b ENSGT00940000163116 ENSGT00950000183076.a.b.b.a.a ENSGT00390000010652.C Cercopithecidae ANCESTRAL SPECIES 185 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 Cercopithecinae ANCESTRAL SPECIES 175 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 Cercopithecinae_a ANCESTRAL SPECIES 174 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 Cercopithecinae_b ANCESTRAL SPECIES 192 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 Cercopithecinae_d ANCESTRAL SPECIES 60 ENSGT00910000147385 ENSGT00910000146870 ENSGT00940000156205 ENSGT00910000148191 ENSGT00940000157771 ENSGT01020000230401.b.a.m.a ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00390000011698.c.a.c.a.i ENSGT00940000160523 ENSGT00910000146810 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00950000182891.a.a.b.a.b.b.a.b ENSGT00940000156291 ENSGT00860000135750 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156876.k.b ENSGT00940000163116 ENSGT00950000183076.a.b.b.a.a ENSGT00390000010652.C Sooty mangabey MODERN SPECIES 215 LYSMD4 (ENSCATG00000045215) ENSCATG00000041680 MEF2A (ENSCATG00000013642) ENSCATG00000022742 LRRC28 (ENSCATG00000040008) ENSCATG00000013868 TTC23 (ENSCATG00000030495) SYNM (ENSCATG00000025065) PGPEP1L (ENSCATG00000028080) IGF1R (ENSCATG00000027553) ENSCATG00000036401 ENSCATG00000037029 ARRDC4 (ENSCATG00000042268) ENSCATG00000039546 ENSCATG00000030455 ENSCATG00000038786 ##22 NR2F2 (ENSCATG00000031188) ENSCATG00000018962 MCTP2 (ENSCATG00000040946) ENSCATG00000044758 RGMA (ENSCATG00000031113) CHD2 (ENSCATG00000031069) FAM174B (ENSCATG00000037463) ST8SIA2 (ENSCATG00000035756) ENSCATG00000037617 SLCO3A1 (ENSCATG00000037751) SV2B (ENSCATG00000040402) Drill MODERN SPECIES 1648 ENSMLEG00000022570 ENSMLEG00000026190 MEF2A (ENSMLEG00000040969) ENSMLEG00000043137 LRRC28 (ENSMLEG00000028357) ENSMLEG00000029728 TTC23 (ENSMLEG00000042651) SYNM (ENSMLEG00000027302) PGPEP1L (ENSMLEG00000039938) IGF1R (ENSMLEG00000036236) ENSMLEG00000043699 ENSMLEG00000018383 ARRDC4 (ENSMLEG00000026370) ENSMLEG00000033372 ENSMLEG00000037058 ENSMLEG00000027490 ##22 NR2F2 (ENSMLEG00000039345) ENSMLEG00000022024 MCTP2 (ENSMLEG00000035947) ENSMLEG00000040680 Macaca ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 Pig-tailed macaque MODERN SPECIES 557 ENSMNEG00000036969 ENSMNEG00000031350 LYSMD4 (ENSMNEG00000040707) ENSMNEG00000031780 MEF2A (ENSMNEG00000030025) ENSMNEG00000019113 ENSMNEG00000032848 LRRC28 (ENSMNEG00000037760) TTC23 (ENSMNEG00000029743) SYNM (ENSMNEG00000033330) PGPEP1L (ENSMNEG00000021363) IGF1R (ENSMNEG00000038485) ENSMNEG00000022749 ARRDC4 (ENSMNEG00000038340) ENSMNEG00000037257 ENSMNEG00000040826 ##22 NR2F2 (ENSMNEG00000035712) ENSMNEG00000043107 MCTP2 (ENSMNEG00000035810) ENSMNEG00000031378 RGMA (ENSMNEG00000034257) CHD2 (ENSMNEG00000036875) ENSMNEG00000037638 FAM174B (ENSMNEG00000045033) ENSMNEG00000039640 ST8SIA2 (ENSMNEG00000035925) SLCO3A1 (ENSMNEG00000034162) SV2B (ENSMNEG00000040435) Rhinopithecus ANCESTRAL SPECIES 1039 ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A.j Black snub-nosed monkey MODERN SPECIES 320 ENSRBIG00000039629 ENSRBIG00000007021 ENSRBIG00000032734 ##22 ENSRBIG00000029319 Hominoidea ANCESTRAL SPECIES 28 ENSGT01030000234515.a.b.a.b ENSGT00940000158773 ENSGT00940000160583 ENSGT00910000146870 ENSGT00940000156205 ENSGT00940000170417 ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00940000160523 ENSGT00910000146810 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00940000161069.f ENSGT00390000017267.i.b ENSGT00860000135750 ENSGT00940000156291 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00940000157160.e ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT00940000153052.c.b.b.a.b ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156813 Hominidae ANCESTRAL SPECIES 27 ENSGT01030000234515.a.b.a.b ENSGT00940000158773 ENSGT00940000160583 ENSGT00910000146870 ENSGT00940000156205 ENSGT00940000170417 ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00940000160523 ENSGT00390000010718 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00390000017267.i.b ENSGT00860000135750 ENSGT00940000156291 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT00940000153052.c.b.b.a.b ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156813 ENSGT00390000009453 ENSGT00940000162149 Homo/Pan/Gorilla group ANCESTRAL SPECIES 30 ENSGT00940000158773 ENSGT00910000147385 ENSGT00940000160583 ENSGT00910000146870 ENSGT00940000156205 ENSGT00940000170417 ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00940000160523 ENSGT00390000010718 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00390000017267.i.b ENSGT00860000135750 ENSGT00940000156291 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT00940000153052.c.b.b.a.b ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156813 ENSGT00390000009453 ENSGT00940000162149 Homo/Pan group ANCESTRAL SPECIES 29 ENSGT01030000234515.a.b.a.b ENSGT00940000158773 ENSGT00910000147385 ENSGT00940000160583 ENSGT00940000156205 ENSGT00940000170417 ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00940000160523 ENSGT00390000010718 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00390000017267.i.b ENSGT00860000135750 ENSGT00940000156291 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT00940000153052.c.b.b.a.b ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156813 ENSGT00390000009453 ENSGT00940000162149 Pan ANCESTRAL SPECIES 34 ENSGT01030000234515.a.b.a.b ENSGT00940000158773 ENSGT00910000147385 ENSGT00940000160583 ENSGT00940000156205 ENSGT00940000170417 ENSGT00940000157771 ENSGT00530000063847.a ENSGT00940000159268 ENSGT00390000015368.a.b ENSGT00940000156682 ENSGT00510000048902.b ENSGT00940000160523 ENSGT00390000010718 ENSGT00530000063727.A.j ENSGT00950000182926.b.d.c.b.b.c.a.b ##22 ENSGT00940000157540.A ENSGT00390000017267.i.b ENSGT00860000135750 ENSGT00940000156291 ENSGT00950000183112.a ENSGT00940000155888 ENSGT00940000157160.e ENSGT00730000111392 ENSGT00910000147013 ENSGT01030000234535.F.a ENSGT00940000153052.c.b.b.a.b ENSGT01080000257410.A.f ENSGT00950000182940.b.a.a ENSGT00940000156813 ENSGT00390000009453 Chimpanzee MODERN SPECIES 6 CERS3 (ENSPTRG00000007502) ADAMTS17 (ENSPTRG00000007500) ENSPTRG00000047954 LYSMD4 (ENSPTRG00000007497) MEF2A (ENSPTRG00000007496) ENSPTRG00000046616 LRRC28 (ENSPTRG00000007495) TTC23 (ENSPTRG00000007494) SYNM (ENSPTRG00000007493) ENSPTRG00000007492 IGF1R (ENSPTRG00000007489) FAM169B (ENSPTRG00000042426) ARRDC4 (ENSPTRG00000007487) SPATA8 (ENSPTRG00000007486) ENSPTRG00000045669 ENSPTRG00000044433 ##22 NR2F2 (ENSPTRG00000044693) ENSPTRG00000052493 ENSPTRG00000043984 MCTP2 (ENSPTRG00000007482) RGMA (ENSPTRG00000007480) CHD2 (ENSPTRG00000007478) ENSPTRG00000044489 ENSPTRG00000042874 FAM174B (ENSPTRG00000007475) ENSPTRG00000047348 ST8SIA2 (ENSPTRG00000049717) ENSPTRG00000052368 SLCO3A1 (ENSPTRG00000007471) SV2B (ENSPTRG00000007469) VPS33B (ENSPTRG00000007468) Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Mas night monkey MODERN SPECIES 321 GRM7 (ENSANAG00000036825) LMCD1 (ENSANAG00000034565) SSUH2 (ENSANAG00000038074) ENSANAG00000025958 CAV3 (ENSANAG00000027621) OXTR (ENSANAG00000031655) RAD18 (ENSANAG00000033360) ENSANAG00000037778 SRGAP3 (ENSANAG00000034431) ENSANAG00000024293 ##22 THUMPD3 (ENSANAG00000002365) SETD5 (ENSANAG00000005767) LHFPL4 (ENSANAG00000032953) MTMR14 (ENSANAG00000033686) CPNE9 (ENSANAG00000034969) BRPF1 (ENSANAG00000019372) OGG1 (ENSANAG00000037964) CAMK1 (ENSANAG00000027843) TADA3 (ENSANAG00000031129) ENSANAG00000037313 TTLL3 (ENSANAG00000025962) ENSANAG00000029371 ENSANAG00000030547 ENSANAG00000031570 SLC6A1 (ENSANAG00000028300) Cebidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Capuchin MODERN SPECIES 219 ATP6V1FNB (ENSCCAG00000033294) ENSCCAG00000034897 FLNC (ENSCCAG00000022550) CCDC136 (ENSCCAG00000034758) OPN1SW (ENSCCAG00000037669) CALU (ENSCCAG00000037513) FAM71F1 (ENSCCAG00000032023) FAM71F2 (ENSCCAG00000028902) IMPDH (ENSCCAG00000020872) PRRT4 (ENSCCAG00000024784) RBM28 (ENSCCAG00000035105) ENSCCAG00000022053 LEP (ENSCCAG00000032161) ENSCCAG00000025380 LRRC4 (ENSCCAG00000002650) ENSCCAG00000014968 ##22 SND1 (ENSCCAG00000036847) PAX4 (ENSCCAG00000005730) FSCN3 (ENSCCAG00000026519) ENSCCAG00000027943 GCC1 (ENSCCAG00000022144) ZNF800 (ENSCCAG00000021078) GRM8 (ENSCCAG00000020804) Catarrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Cercopithecinae_a ANCESTRAL SPECIES 243 ENSGT00550000074994.p ENSGT00950000182926.b.d.c.b.b.c.b ##22 Macaca ANCESTRAL SPECIES 181 ENSGT00550000074994.p ENSGT00950000182926.b.d.c.b.b.c.b ##22 Pig-tailed macaque MODERN SPECIES 190 ENSMNEG00000042479 ENSMNEG00000042773 VWC2 (ENSMNEG00000035702) ZPBP (ENSMNEG00000008202) SPATA48 (ENSMNEG00000040240) IKZF1 (ENSMNEG00000033465) ENSMNEG00000028866 DDC (ENSMNEG00000000178) GRB10 (ENSMNEG00000039855) ENSMNEG00000042806 COBL (ENSMNEG00000044240) ENSMNEG00000013900 ENSMNEG00000042241 ENSMNEG00000037561 ENSMNEG00000019174 ENSMNEG00000034131 ##22 Cercopithecinae_b ANCESTRAL SPECIES 250 ENSGT00550000074994.p ENSGT00950000182926.b.d.c.b.b.c.b ##22 Cercopithecinae_d ANCESTRAL SPECIES 354 ENSGT00550000074994.p ENSGT00950000182926.b.d.c.b.b.c.b ##22 Drill MODERN SPECIES 1237 ENSMLEG00000040898 ##22 Sooty mangabey MODERN SPECIES 133 SUN3 (ENSCATG00000036420) C7orf57 (ENSCATG00000028895) UPP1 (ENSCATG00000040025) ABCA13 (ENSCATG00000034377) CDC14C (ENSCATG00000032252) ENSCATG00000044759 VWC2 (ENSCATG00000009270) ZPBP (ENSCATG00000036172) SPATA48 (ENSCATG00000036782) IKZF1 (ENSCATG00000041205) DDC (ENSCATG00000013954) GRB10 (ENSCATG00000026832) COBL (ENSCATG00000031936) ENSCATG00000031533 ENSCATG00000035640 ENSCATG00000033364 ##22 VSTM2A (ENSCATG00000018326) ENSCATG00000017520 SEC61G (ENSCATG00000036780) ENSCATG00000029935 EGFR (ENSCATG00000039642) LANCL2 (ENSCATG00000038535) VOPP1 (ENSCATG00000014863) Hominoidea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.c.b ##22 Orangutan MODERN SPECIES 2 KCNK7 (ENSPPYG00000003059) EHBP1L1 (ENSPPYG00000003060) FAM89B (ENSPPYG00000003061) ZNRD2 (ENSPPYG00000003062) LTBP3 (ENSPPYG00000003063) SCYL1 (ENSPPYG00000003064) ENSPPYG00000030176 ENSPPYG00000003066 FRMD8 (ENSPPYG00000031154) SLC25A45 (ENSPPYG00000003067) TIGD3 (ENSPPYG00000003068) DPF2 (ENSPPYG00000003069) CDC42EP2 (ENSPPYG00000032097) POLA2 (ENSPPYG00000003071) CAPN1 (ENSPPYG00000003073) ENSPPYG00000041044 ##22 SPDYC (ENSPPYG00000003074) ENSPPYG00000032178 SYVN1 (ENSPPYG00000003075) MRPL49 (ENSPPYG00000037407) FAU (ENSPPYG00000038797) ZNHIT2 (ENSPPYG00000003078) TM7SF2 (ENSPPYG00000003079) VPS51 (ENSPPYG00000003080) TMEM262 (ENSPPYG00000040202) ZFPL1 (ENSPPYG00000003082) ENSPPYG00000003083 NAALADL1 (ENSPPYG00000003084) SAC3D1 (ENSPPYG00000003085) ENSPPYG00000003086 ARL2 (ENSPPYG00000038004) Simiiformes ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Marmoset MODERN SPECIES 3 ENSCJAG00000041013 ##22 POLR3K (ENSCJAG00000011568) SNRNP25 (ENSCJAG00000080317) MPG (ENSCJAG00000011582) NPRL3 (ENSCJAG00000011598) HBZ (ENSCJAG00000043819) HBM (ENSCJAG00000011639) ENSCJAG00000011647 HBQ1 (ENSCJAG00000011671) LUC7L (ENSCJAG00000011674) FAM234A (ENSCJAG00000037284) RGS11 (ENSCJAG00000011745) ARHGDIG (ENSCJAG00000061079) AXIN1 (ENSCJAG00000011809) MRPL28 (ENSCJAG00000083388) PGAP6 (ENSCJAG00000011857) Cebidae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Capuchin MODERN SPECIES 58 C11orf94 (ENSCCAG00000021208) PEX16 (ENSCCAG00000030937) LARGE2 (ENSCCAG00000022292) PHF21A (ENSCCAG00000031643) ENSCCAG00000032167 CREB3L1 (ENSCCAG00000036096) DGKZ (ENSCCAG00000027153) ENSCCAG00000030225 CHRM4 (ENSCCAG00000016622) AMBRA1 (ENSCCAG00000036631) HARBI1 (ENSCCAG00000033538) ATG13 (ENSCCAG00000033415) ARHGAP1 (ENSCCAG00000005865) ZNF408 (ENSCCAG00000029472) F2 (ENSCCAG00000028699) PGAM4 (ENSCCAG00000037081) ##22 CKAP5 (ENSCCAG00000029859) ENSCCAG00000033202 LRP4 (ENSCCAG00000034888) C11orf49 (ENSCCAG00000028967) ENSCCAG00000036464 PACSIN3 (ENSCCAG00000031265) DDB2 (ENSCCAG00000031012) ACP2 (ENSCCAG00000022333) NR1H3 (ENSCCAG00000024854) MADD (ENSCCAG00000036617) MYBPC3 (ENSCCAG00000036859) SPI1 (ENSCCAG00000022473) SLC39A13 (ENSCCAG00000034535) PSMC3 (ENSCCAG00000025080) RAPSN (ENSCCAG00000022014) Bolivian squirrel monkey MODERN SPECIES 42 FREY1 (ENSSBOG00000032977) PEX16 (ENSSBOG00000001635) LARGE2 (ENSSBOG00000024444) PHF21A (ENSSBOG00000026213) CREB3L1 (ENSSBOG00000026826) DGKZ (ENSSBOG00000028666) ENSSBOG00000025813 CHRM4 (ENSSBOG00000015294) AMBRA1 (ENSSBOG00000021917) HARBI1 (ENSSBOG00000025915) ATG13 (ENSSBOG00000009657) ARHGAP1 (ENSSBOG00000032970) ZNF408 (ENSSBOG00000033023) F2 (ENSSBOG00000020779) CKAP5 (ENSSBOG00000031735) ENSSBOG00000028063 ##22 ENSSBOG00000032726 LRP4 (ENSSBOG00000032261) CSTPP1 (ENSSBOG00000033686) ENSSBOG00000031368 PACSIN3 (ENSSBOG00000033696) DDB2 (ENSSBOG00000030867) ACP2 (ENSSBOG00000033600) NR1H3 (ENSSBOG00000027982) MADD (ENSSBOG00000021915) MYBPC3 (ENSSBOG00000030340) SPI1 (ENSSBOG00000022091) SLC39A13 (ENSSBOG00000010603) ENSSBOG00000006227 RAPSN (ENSSBOG00000022262) CELF1 (ENSSBOG00000021912) Catarrhini ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Rhinopithecus ANCESTRAL SPECIES 984 ENSGT00950000182926.b.d.c.b.b.d ##22 ENSGT00940000154939 Golden snub-nosed monkey MODERN SPECIES 1200 ENSRROG00000008761 SLC16A9 (ENSRROG00000033335) MRLN (ENSRROG00000005710) ENSRROG00000039976 CCDC6 (ENSRROG00000035795) ENSRROG00000030358 ##22 ANK3 (ENSRROG00000007163) ENSRROG00000041085 CDK1 (ENSRROG00000043415) RHOBTB1 (ENSRROG00000038093) Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 534 SATB1 (ENSRBIG00000042854) ENSRBIG00000036838 ENSRBIG00000037606 TBC1D5 (ENSRBIG00000034049) PLCL2 (ENSRBIG00000043534) ENSRBIG00000015911 ENSRBIG00000034010 ENSRBIG00000009846 ##22 Black snub-nosed monkey MODERN SPECIES 1778 ENSRBIG00000038020 ##22 ENSRBIG00000043508 ANK3 (ENSRBIG00000029117) CDK1 (ENSRBIG00000044302) RHOBTB1 (ENSRBIG00000019190) TMEM26 (ENSRBIG00000034827) CABCOCO1 (ENSRBIG00000034467) ARID5B (ENSRBIG00000033016) RTKN2 (ENSRBIG00000036892) Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Olive baboon MODERN SPECIES 6 ARHGEF7 (ENSPANG00000019938) ANKRD10 (ENSPANG00000035969) ING1 (ENSPANG00000015880) CARS2 (ENSPANG00000017574) NAXD (ENSPANG00000000957) RAB20 (ENSPANG00000044058) COL4A2 (ENSPANG00000012522) COL4A1 (ENSPANG00000004421) IRS2 (ENSPANG00000029692) MYO16 (ENSPANG00000012679) ENSPANG00000019731 LIG4 (ENSPANG00000007562) ENSPANG00000045788 ENSPANG00000046676 NALF1 (ENSPANG00000009295) ENSPANG00000011850 ##22 ENSPANG00000044135 ENSPANG00000050745 ENSPANG00000037981 ARGLU1 (ENSPANG00000049597) EFNB2 (ENSPANG00000004281) ENSPANG00000007600 ENSPANG00000048625 ENSPANG00000041499 ENSPANG00000042101 ENSPANG00000046932 ENSPANG00000038142 SLC10A2 (ENSPANG00000049257) METTL21EP (ENSPANG00000008110) ENSPANG00000007563 POGLUT2 (ENSPANG00000018248) Cercopithecinae_d ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Drill MODERN SPECIES 1591 ENSMLEG00000015628 ##22 ARGLU1 (ENSMLEG00000005466) EFNB2 (ENSMLEG00000036784) Macaca ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Macaca_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Crab-eating macaque MODERN SPECIES 1 PLCG1 (ENSMFAG00000000283) ZHX3 (ENSMFAG00000038640) ENSMFAG00000047948 LPIN3 (ENSMFAG00000038975) EMILIN3 (ENSMFAG00000045816) CHD6 (ENSMFAG00000032830) PTPRT (ENSMFAG00000002480) ENSMFAG00000030794 ENSMFAG00000032571 SRSF6 (ENSMFAG00000036925) L3MBTL1 (ENSMFAG00000032249) SGK2 (ENSMFAG00000032486) IFT52 (ENSMFAG00000044608) MYBL2 (ENSMFAG00000032458) ENSMFAG00000062509 ENSMFAG00000026943 ##22 TOX2 (ENSMFAG00000036799) JPH2 (ENSMFAG00000002372) OSER1 (ENSMFAG00000000578) GDAP1L1 (ENSMFAG00000031122) ENSMFAG00000057869 FITM2 (ENSMFAG00000044491) R3HDML (ENSMFAG00000038530) HNF4A (ENSMFAG00000035660) ENSMFAG00000053985 TTPAL (ENSMFAG00000036596) SERINC3 (ENSMFAG00000045198) PKIG (ENSMFAG00000003009) ENSMFAG00000042071 CCN5 (ENSMFAG00000036685) RIMS4 (ENSMFAG00000052597) Pig-tailed macaque MODERN SPECIES 550 CC2D2B (ENSMNEG00000042350) CCNJ (ENSMNEG00000034961) ZNF518A (ENSMNEG00000028261) BLNK (ENSMNEG00000031238) DNTT (ENSMNEG00000043593) OPALIN (ENSMNEG00000036553) TLL2 (ENSMNEG00000000061) TM9SF3 (ENSMNEG00000040908) PIK3AP1 (ENSMNEG00000033410) LCOR (ENSMNEG00000030522) SLIT1 (ENSMNEG00000030571) ARHGAP19 (ENSMNEG00000042296) FRAT1 (ENSMNEG00000029910) FRAT2 (ENSMNEG00000006562) RRP12 (ENSMNEG00000036759) ENSMNEG00000028115 ##22 EXOSC1 (ENSMNEG00000029816) ZDHHC16 (ENSMNEG00000027994) MMS19 (ENSMNEG00000044701) UBTD1 (ENSMNEG00000039022) ANKRD2 (ENSMNEG00000039814) MORN4 (ENSMNEG00000035432) PI4K2A (ENSMNEG00000020019) AVPI1 (ENSMNEG00000032294) MARVELD1 (ENSMNEG00000009162) ZFYVE27 (ENSMNEG00000039230) SFRP5 (ENSMNEG00000043178) GOLGA7B (ENSMNEG00000033947) ENSMNEG00000001433 CRTAC1 (ENSMNEG00000035544) R3HCC1L (ENSMNEG00000037890) Hominoidea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b.b.d ##22 Human MODERN SPECIES 1827 RPS6KA6 (ENSG00000072133) CYLC1 (ENSG00000183035) POU3F4 (ENSG00000196767) SH3BGRL (ENSG00000131171) HMGN5 (ENSG00000198157) BRWD3 (ENSG00000165288) TENT5D (ENSG00000174016) TBX22 (ENSG00000122145) ITM2A (ENSG00000078596) GPR174 (ENSG00000147138) P2RY10 (ENSG00000078589) LPAR4 (ENSG00000147145) RTL3 (ENSG00000179300) CYSLTR1 (ENSG00000173198) TAF9B (ENSG00000187325) PGAM4 (ENSG00000226784) ##22 PGK1 (ENSG00000102144) ATP7A (ENSG00000165240) COX7B (ENSG00000131174) MAGT1 (ENSG00000102158) ATRX (ENSG00000085224) FGF16 (ENSG00000196468) MAGEE1 (ENSG00000198934) PBDC1 (ENSG00000102390) MAGEE2 (ENSG00000186675) ZDHHC15 (ENSG00000102383) UPRT (ENSG00000094841) ABCB7 (ENSG00000131269) NEXMIF (ENSG00000050030) RLIM (ENSG00000131263) SLC16A2 (ENSG00000147100) Gorilla MODERN SPECIES 22 ENSGGOG00000039378 ZBTB5 (ENSGGOG00000043647) GRHPR (ENSGGOG00000003710) ZCCHC7 (ENSGGOG00000034973) PAX5 (ENSGGOG00000003633) MELK (ENSGGOG00000014746) RNF38 (ENSGGOG00000016336) GNE (ENSGGOG00000013160) CLTA (ENSGGOG00000013155) CCIN (ENSGGOG00000027920) GLIPR2 (ENSGGOG00000003324) RECK (ENSGGOG00000003313) ENSGGOG00000024545 ENSGGOG00000024475 ENSGGOG00000024643 ENSGGOG00000024966 ##22 SPAAR (ENSGGOG00000039944) HRCT1 (ENSGGOG00000036981) ENSGGOG00000043128 OR13J1 (ENSGGOG00000028587) ENSGGOG00000007705 FAM221B (ENSGGOG00000011270) HINT2 (ENSGGOG00000011265) SPAG8 (ENSGGOG00000011256) NPR2 (ENSGGOG00000011241) RGP1 (ENSGGOG00000007370) MSMP (ENSGGOG00000007374) GBA2 (ENSGGOG00000007356) CREB3 (ENSGGOG00000007353) ENSGGOG00000007440 CD72 (ENSGGOG00000017153) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Suina ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Chacoan peccary MODERN SPECIES 955 CCNJ (ENSCWAG00000017468) BLNK (ENSCWAG00000016542) DNTT (ENSCWAG00000016338) OPALIN (ENSCWAG00000015720) TLL2 (ENSCWAG00000015533) TM9SF3 (ENSCWAG00000015473) PIK3AP1 (ENSCWAG00000015321) ENSCWAG00000015271 LCOR (ENSCWAG00000015211) SLIT1 (ENSCWAG00000014663) ARHGAP19 (ENSCWAG00000014322) FRAT1 (ENSCWAG00000014264) FRAT2 (ENSCWAG00000014245) RRP12 (ENSCWAG00000014123) ENSCWAG00000014086 PGAM4 (ENSCWAG00000014065) ##22 EXOSC1 (ENSCWAG00000013946) ENSCWAG00000013760 MMS19 (ENSCWAG00000013469) UBTD1 (ENSCWAG00000013405) ANKRD2 (ENSCWAG00000013015) HOGA1 (ENSCWAG00000012895) MORN4 (ENSCWAG00000012823) PI4K2A (ENSCWAG00000012772) AVPI1 (ENSCWAG00000012736) MARVELD1 (ENSCWAG00000012717) ZFYVE27 (ENSCWAG00000012082) SFRP5 (ENSCWAG00000011979) GOLGA7B (ENSCWAG00000011885) CRTAC1 (ENSCWAG00000020281) R3HCC1L (ENSCWAG00000020239) Artiodactyla_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Camelidae ANCESTRAL SPECIES 4 ENSGT01100000263542.C ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.b ENSGT00390000013106 ENSGT00950000182926.b.d.c.b ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00390000015820 ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Alpaca MODERN SPECIES 4085 ENSVPAG00000004947 ##22 Arabian camel MODERN SPECIES 2 ENSCDRG00005010552 CCNJ (ENSCDRG00005010456) ZNF518A (ENSCDRG00005010426) BLNK (ENSCDRG00005010120) DNTT (ENSCDRG00005009911) OPALIN (ENSCDRG00005009332) TLL2 (ENSCDRG00005009257) TM9SF3 (ENSCDRG00005008940) PIK3AP1 (ENSCDRG00005008820) ENSCDRG00005008738 LCOR (ENSCDRG00005008609) SLIT1 (ENSCDRG00005008525) ARHGAP19 (ENSCDRG00005008432) FRAT1 (ENSCDRG00005008405) RRP12 (ENSCDRG00005008039) PGAM4 (ENSCDRG00005007987) ##22 EXOSC1 (ENSCDRG00005007159) ZDHHC16 (ENSCDRG00005006637) MMS19 (ENSCDRG00005006081) UBTD1 (ENSCDRG00005006007) ANKRD2 (ENSCDRG00005005898) C10orf62 (ENSCDRG00005005880) HOGA1 (ENSCDRG00005005801) MORN4 (ENSCDRG00005005757) PI4K2A (ENSCDRG00005005722) AVPI1 (ENSCDRG00005005710) MARVELD1 (ENSCDRG00005005688) ZFYVE27 (ENSCDRG00005005050) SFRP5 (ENSCDRG00005004990) GOLGA7B (ENSCDRG00005004929) CRTAC1 (ENSCDRG00005004684) Artiodactyla_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Pecora ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Bovinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Bos ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Bos_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Cow MODERN SPECIES 27 TMEM252 (ENSBTAG00000011874) PIP5K1B (ENSBTAG00000009917) FXN (ENSBTAG00000001306) TJP2 (ENSBTAG00000011770) ENTREP1 (ENSBTAG00000011173) APBA1 (ENSBTAG00000008877) PTAR1 (ENSBTAG00000005826) CFAP95 (ENSBTAG00000033396) MAMDC2 (ENSBTAG00000017369) SMC5 (ENSBTAG00000018437) ENSBTAG00000052999 KLF9 (ENSBTAG00000016229) TRPM3 (ENSBTAG00000007778) TRPM3 (ENSBTAG00000050253) CEMIP2 (ENSBTAG00000005090) ENSBTAG00000054590 ##22 ABHD17B (ENSBTAG00000006816) C8H9orf85 (ENSBTAG00000006831) GDA (ENSBTAG00000011545) ZFAND5 (ENSBTAG00000009417) ENSBTAG00000054894 TMC1 (ENSBTAG00000018778) ENSBTAG00000052698 ALDH1A1 (ENSBTAG00000008103) ANXA1 (ENSBTAG00000015978) ENSBTAG00000053207 RORB (ENSBTAG00000021699) TRPM6 (ENSBTAG00000033076) ENSBTAG00000051504 C8H9orf40 (ENSBTAG00000013231) CARNMT1 (ENSBTAG00000008204) Bos_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Wild yak MODERN SPECIES 2435 ENSBMUG00000018296 ##22 Caprinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 4 ENSOARG00020025351 ENSOARG00020025359 SNRPB2 (ENSOARG00020025367) OTOR (ENSOARG00020025370) NANP (ENSOARG00020025376) ENSOARG00020003187 ENSOARG00020003227 ENSOARG00020003271 FBH1 (ENSOARG00020003456) ENSOARG00020003590 IL2RA (ENSOARG00020003621) RBM17 (ENSOARG00020003664) PFKFB3 (ENSOARG00020003727) PRKCQ (ENSOARG00020003986) SFMBT2 (ENSOARG00020004270) ENSOARG00020004315 ##22 ITIH5 (ENSOARG00020004363) ENSOARG00020004546 ITIH2 (ENSOARG00020004566) KIN (ENSOARG00020004659) ATP5F1C (ENSOARG00020004769) TAF3 (ENSOARG00020004833) GATA3 (ENSOARG00020004895) CELF2 (ENSOARG00020005064) USP6NL (ENSOARG00020005525) ECHDC3 (ENSOARG00020005746) ENSOARG00020005780 UPF2 (ENSOARG00020005801) DHTKD1 (ENSOARG00020005895) SEC61A2 (ENSOARG00020006097) NUDT5 (ENSOARG00020007141) Rambouillet Sheep MODERN SPECIES 13 JAM3 (ENSOARG00020009874) IGSF9B (ENSOARG00020010264) SPATA19 (ENSOARG00020010923) OPCML (ENSOARG00020011005) ENSOARG00020011324 ENSOARG00020011407 TMEM45B (ENSOARG00020011458) NFRKB (ENSOARG00020011602) PRDM10 (ENSOARG00020011870) APLP2 (ENSOARG00020012094) ENSOARG00020012954 ST14 (ENSOARG00020013007) ZBTB44 (ENSOARG00020013898) ADAMTS15 (ENSOARG00020014165) SNX19 (ENSOARG00020014289) ENSOARG00020014561 ##22 MS4A8 (ENSOARG00020014608) ENSOARG00020014643 MS4A15 (ENSOARG00020014705) CCDC86 (ENSOARG00020015152) PTGDR2 (ENSOARG00020015206) PRPF19 (ENSOARG00020015225) TMEM109 (ENSOARG00020015313) TMEM132A (ENSOARG00020015357) SLC15A3 (ENSOARG00020015451) ENSOARG00020015709 VPS37C (ENSOARG00020015860) ENSOARG00020015937 ENSOARG00020016043 ENSOARG00020016221 ENSOARG00020016320 Cetacea ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Blue whale MODERN SPECIES 7 CCNJ (ENSBMSG00010017383) ZNF518A (ENSBMSG00010017358) BLNK (ENSBMSG00010016850) DNTT (ENSBMSG00010016661) OPALIN (ENSBMSG00010016051) TLL2 (ENSBMSG00010015946) TM9SF3 (ENSBMSG00010015811) PIK3AP1 (ENSBMSG00010015684) ENSBMSG00010015636 LCOR (ENSBMSG00010015588) SLIT1 (ENSBMSG00010015125) ARHGAP19 (ENSBMSG00010014875) FRAT1 (ENSBMSG00010014808) FRAT2 (ENSBMSG00010014789) RRP12 (ENSBMSG00010014708) PGAM4 (ENSBMSG00010014630) ##22 EXOSC1 (ENSBMSG00010014544) ZDHHC16 (ENSBMSG00010014246) MMS19 (ENSBMSG00010014036) UBTD1 (ENSBMSG00010021584) ANKRD2 (ENSBMSG00010021528) HOGA1 (ENSBMSG00010021510) ENSBMSG00010021499 PI4K2A (ENSBMSG00010021477) AVPI1 (ENSBMSG00010021470) MARVELD1 (ENSBMSG00010021463) SFRP5 (ENSBMSG00010021454) ENSBMSG00010021433 ZFYVE27 (ENSBMSG00010021315) CRTAC1 (ENSBMSG00010021195) R3HCC1L (ENSBMSG00010021112) Odontoceti ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Dolphin MODERN SPECIES 2524 ENSTTRG00000009856 LCOR (ENSTTRG00000009862) SLIT1 (ENSTTRG00000009865) ARHGAP19 (ENSTTRG00000009873) FRAT1 (ENSTTRG00000009877) RRP12 (ENSTTRG00000009878) ENSTTRG00000009885 ##22 EXOSC1 (ENSTTRG00000009887) ZDHHC16 (ENSTTRG00000009890) MMS19 (ENSTTRG00000009892) UBTD1 (ENSTTRG00000009894) ANKRD2 (ENSTTRG00000009895) HOGA1 (ENSTTRG00000009896) C10orf62 (ENSTTRG00000009897) MORN4 (ENSTTRG00000009898) PI4K2A (ENSTTRG00000009899) ENSTTRG00000009900 MARVELD1 (ENSTTRG00000009901) ZFYVE27 (ENSTTRG00000009902) SFRP5 (ENSTTRG00000009903) GOLGA7B (ENSTTRG00000009904) CRTAC1 (ENSTTRG00000009905) Sperm whale DUPLICATION Sperm whale MODERN SPECIES 1034 ENSPCTG00005015606 ##22 Sperm whale MODERN SPECIES SERPINI2 (ENSPCTG00005000778) PDCD10 (ENSPCTG00005000801) SERPINI1 (ENSPCTG00005000818) GOLIM4 (ENSPCTG00005000852) ENSPCTG00005000924 MECOM (ENSPCTG00005000999) ACTRT3 (ENSPCTG00005001252) MYNN (ENSPCTG00005001270) LRRC34 (ENSPCTG00005001296) LRRIQ4 (ENSPCTG00005001334) LRRC31 (ENSPCTG00005001353) SAMD7 (ENSPCTG00005001374) SEC62 (ENSPCTG00005001393) GPR160 (ENSPCTG00005001412) PHC3 (ENSPCTG00005001443) ENSPCTG00005001517 ##22 PRKCI (ENSPCTG00005001542) SKIL (ENSPCTG00005001599) CLDN11 (ENSPCTG00005001618) SLC7A14 (ENSPCTG00005001634) ENSPCTG00005001650 RPL22L1 (ENSPCTG00005001662) EIF5A2 (ENSPCTG00005001682) SLC2A2 (ENSPCTG00005001701) TNIK (ENSPCTG00005001786) PLD1 (ENSPCTG00005001936) TMEM212 (ENSPCTG00005002038) FNDC3B (ENSPCTG00005002082) GHSR (ENSPCTG00005002161) TNFSF10 (ENSPCTG00005002181) NCEH1 (ENSPCTG00005002205) Atlantogenata ANCESTRAL SPECIES ENSGT00950000182926.b.d.c.b ##22 Afrotheria ANCESTRAL SPECIES 4 ENSGT00940000164312 ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.b ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Tenrec MODERN SPECIES 11626 ENSETEG00000008034 ##22 Afrotheria_a ANCESTRAL SPECIES 4 ENSGT01100000263542.C ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.a ENSGT00390000013106 ENSGT00950000182926.b.d.c.b ##22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Elephant MODERN SPECIES 3 CC2D2B (ENSLAFG00000008968) CCNJ (ENSLAFG00000008972) BLNK (ENSLAFG00000003491) DNTT (ENSLAFG00000003492) OPALIN (ENSLAFG00000003493) TLL2 (ENSLAFG00000008166) TM9SF3 (ENSLAFG00000016524) PIK3AP1 (ENSLAFG00000011699) ENSLAFG00000014271 LCOR (ENSLAFG00000014729) SLIT1 (ENSLAFG00000014273) ARHGAP19 (ENSLAFG00000020968) ENSLAFG00000010024 ENSLAFG00000015960 RRP12 (ENSLAFG00000015965) PGAM4 (ENSLAFG00000015979) ##22 EXOSC1 (ENSLAFG00000015983) ZDHHC16 (ENSLAFG00000015990) MMS19 (ENSLAFG00000009246) UBTD1 (ENSLAFG00000010656) ANKRD2 (ENSLAFG00000010658) HOGA1 (ENSLAFG00000010660) MORN4 (ENSLAFG00000022767) PI4K2A (ENSLAFG00000010665) AVPI1 (ENSLAFG00000022434) ZFYVE27 (ENSLAFG00000013655) SFRP5 (ENSLAFG00000013658) GOLGA7B (ENSLAFG00000003367) CRTAC1 (ENSLAFG00000003369) R3HCC1L (ENSLAFG00000001419) LOXL4 (ENSLAFG00000001421) Hyrax DUPLICATION Hyrax MODERN SPECIES 6816 ENSPCAG00000008698 ##22 WWP1 (ENSPCAG00000008583) Hyrax MODERN SPECIES 3022 RRP12 (ENSPCAG00000008967) ENSPCAG00000009119 ##22 EXOSC1 (ENSPCAG00000009135) ZDHHC16 (ENSPCAG00000009182) MMS19 (ENSPCAG00000009244) UBTD1 (ENSPCAG00000009407) ANKRD2 (ENSPCAG00000009434) ENSPCAG00000009497 C10orf62 (ENSPCAG00000009555) ENSPCAG00000009565 Marsupialia ANCESTRAL SPECIES ENSGT00940000156590 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Opossum MODERN SPECIES CC2D2B (ENSMODG00000004884) CCNJ (ENSMODG00000004869) ZNF518A (ENSMODG00000004851) BLNK (ENSMODG00000004839) DNTT (ENSMODG00000004658) ENSMODG00000025726 TLL2 (ENSMODG00000004648) TM9SF3 (ENSMODG00000004627) ENSMODG00000004606 PIK3AP1 (ENSMODG00000004594) LCOR (ENSMODG00000024950) SLIT1 (ENSMODG00000004492) ARHGAP19 (ENSMODG00000004364) ENSMODG00000039402 RRP12 (ENSMODG00000004315) ENSMODG00000004242 #22 EXOSC1 (ENSMODG00000004213) ZDHHC16 (ENSMODG00000004177) MMS19 (ENSMODG00000004099) ANKRD2 (ENSMODG00000003989) ENSMODG00000003970 HOGA1 (ENSMODG00000003963) MORN4 (ENSMODG00000003942) PI4K2A (ENSMODG00000003931) ENSMODG00000003917 MARVELD1 (ENSMODG00000003911) ZFYVE27 (ENSMODG00000003907) SFRP5 (ENSMODG00000003859) GOLGA7B (ENSMODG00000028192) CRTAC1 (ENSMODG00000003807) ENSMODG00000050795 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000156590.b ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000015820 ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000031068 ENTPD1 (ENSSHAG00000010024) CC2D2B (ENSSHAG00000030787) CCNJ (ENSSHAG00000008374) ENSSHAG00000025783 BLNK (ENSSHAG00000022822) DNTT (ENSSHAG00000004641) ENSSHAG00000027085 TLL2 (ENSSHAG00000032391) PIK3AP1 (ENSSHAG00000018756) LCOR (ENSSHAG00000026052) SLIT1 (ENSSHAG00000018586) ARHGAP19 (ENSSHAG00000018406) ENSSHAG00000025344 RRP12 (ENSSHAG00000018275) ENSSHAG00000018230 #22 EXOSC1 (ENSSHAG00000030321) MMS19 (ENSSHAG00000018183) ZDHHC16 (ENSSHAG00000018206) ANKRD2 (ENSSHAG00000018117) HOGA1 (ENSSHAG00000023284) ENSSHAG00000031417 MORN4 (ENSSHAG00000025545) PI4K2A (ENSSHAG00000018035) AVPI1 (ENSSHAG00000021027) MARVELD1 (ENSSHAG00000030010) ZFYVE27 (ENSSHAG00000017946) SFRP5 (ENSSHAG00000017924) GOLGA7B (ENSSHAG00000028342) CRTAC1 (ENSSHAG00000017544) ENSSHAG00000026322 Diprotodontia ANCESTRAL SPECIES 6 ENSGT00940000156590.b ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT01000000220768 Wallaby MODERN SPECIES 12836 ENSMEUG00000012998 #22 Diprotodontia_a ANCESTRAL SPECIES 7 ENSGT00940000156981 ENSGT00940000162006 ENSGT00940000155715 ENSGT00940000158584 ENSGT00390000009395 ENSGT00940000160572 ENSGT00940000155493 ENSGT00390000008787.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000007081.c ENSGT00390000007081.d ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT01000000220768 Common wonbat MODERN SPECIES 39 ENSVURG00010000966 CCNJ (ENSVURG00010000945) ZNF518A (ENSVURG00010000936) BLNK (ENSVURG00010000903) DNTT (ENSVURG00010000861) TLL2 (ENSVURG00010000307) TM9SF3 (ENSVURG00010000243) PIK3AP1 (ENSVURG00010000200) ENSVURG00010000173 ENSVURG00010000157 SLIT1 (ENSVURG00010000092) ARHGAP19 (ENSVURG00010017293) ENSVURG00010017276 ENSVURG00010017265 RRP12 (ENSVURG00010017238) ENSVURG00010017224 #22 EXOSC1 (ENSVURG00010017204) ZDHHC16 (ENSVURG00010017124) MMS19 (ENSVURG00010017075) ANKRD2 (ENSVURG00010017022) HOGA1 (ENSVURG00010017009) MORN4 (ENSVURG00010016996) PI4K2A (ENSVURG00010016985) AVPI1 (ENSVURG00010016980) MARVELD1 (ENSVURG00010016976) ZFYVE27 (ENSVURG00010016841) SFRP5 (ENSVURG00010016815) GOLGA7B (ENSVURG00010016801) CRTAC1 (ENSVURG00010016779) ENSVURG00010016755 LOXL4 (ENSVURG00010016749) koala DUPLICATION koala MODERN SPECIES 65 ENTPD1 (ENSPCIG00000015055) CC2D2B (ENSPCIG00000015048) CCNJ (ENSPCIG00000015045) ZNF518A (ENSPCIG00000023718) BLNK (ENSPCIG00000023721) DNTT (ENSPCIG00000015695) ENSPCIG00000015887 TLL2 (ENSPCIG00000015891) TM9SF3 (ENSPCIG00000014834) PIK3AP1 (ENSPCIG00000000954) LCOR (ENSPCIG00000001958) SLIT1 (ENSPCIG00000001983) ARHGAP19 (ENSPCIG00000002095) ENSPCIG00000030670 RRP12 (ENSPCIG00000002157) ENSPCIG00000002204 #22 EXOSC1 (ENSPCIG00000002210) ZDHHC16 (ENSPCIG00000002230) MMS19 (ENSPCIG00000002256) UBTD1 (ENSPCIG00000002280) ANKRD2 (ENSPCIG00000002292) HOGA1 (ENSPCIG00000002307) MORN4 (ENSPCIG00000002324) PI4K2A (ENSPCIG00000002342) AVPI1 (ENSPCIG00000033102) MARVELD1 (ENSPCIG00000002363) ZFYVE27 (ENSPCIG00000002380) SFRP5 (ENSPCIG00000034993) GOLGA7B (ENSPCIG00000036348) CRTAC1 (ENSPCIG00000021225) ENSPCIG00000021252 koala MODERN SPECIES 46 SNAI2 (ENSPCIG00000025156) CLXN (ENSPCIG00000025158) ENSPCIG00000023033 MCM4 (ENSPCIG00000023029) PRKDC (ENSPCIG00000020925) ENSPCIG00000031800 ENSPCIG00000031715 ENSPCIG00000020828 ENSPCIG00000006572 ENSPCIG00000030795 ENSPCIG00000006573 ENSPCIG00000006577 MAPRE2 (ENSPCIG00000006582) DTNA (ENSPCIG00000022724) NOL4 (ENSPCIG00000022747) ENSPCIG00000033004 #22 ASXL3 (ENSPCIG00000023859) ENSPCIG00000032672 KLHL14 (ENSPCIG00000006391) GAREM1 (ENSPCIG00000016380) MEP1B (ENSPCIG00000016385) RNF138 (ENSPCIG00000016421) RNF125 (ENSPCIG00000016424) TRAPPC8 (ENSPCIG00000016426) B4GALT6 (ENSPCIG00000016435) ENSPCIG00000016438 TTR (ENSPCIG00000017504) DSG2 (ENSPCIG00000017506) DSG3 (ENSPCIG00000017508) DSG4 (ENSPCIG00000017513) DSG1 (ENSPCIG00000017585) koala MODERN SPECIES 139 LARGE2 (ENSPCIG00000020123) PEX16 (ENSPCIG00000020128) MAPK8IP1 (ENSPCIG00000020132) CRY2 (ENSPCIG00000020134) SLC35C1 (ENSPCIG00000020139) CHST1 (ENSPCIG00000001789) ENSPCIG00000001772 SYT13 (ENSPCIG00000020143) PRDM11 (ENSPCIG00000020145) ENSPCIG00000025050 TSPAN18 (ENSPCIG00000025051) ENSPCIG00000025054 ALX4 (ENSPCIG00000036593) EXT2 (ENSPCIG00000032707) ACCS (ENSPCIG00000016364) ENSPCIG00000016363 #22 ENSPCIG00000016360 C11orf96 (ENSPCIG00000021797) ALKBH3 (ENSPCIG00000021794) HSD17B12 (ENSPCIG00000034473) TTC17 (ENSPCIG00000021783) API5 (ENSPCIG00000021779) ENSPCIG00000037030 Platypus MODERN SPECIES 14 ENSOANG00000050601 ENSOANG00000001773 ZFAND4 (ENSOANG00000001775) MARCHF8 (ENSOANG00000011517) ALOX5 (ENSOANG00000031131) CYP2E1 (ENSOANG00000045753) TLL2 (ENSOANG00000037364) TM9SF3 (ENSOANG00000011487) PIK3AP1 (ENSOANG00000006717) ENSOANG00000013408 ENSOANG00000012073 SLIT1 (ENSOANG00000041489) ARHGAP19 (ENSOANG00000006559) RRP12 (ENSOANG00000006560) ENSOANG00000039166 ENSOANG00000000600 #22 EXOSC1 (ENSOANG00000043049) ENSOANG00000037940 MMS19 (ENSOANG00000012969) UBTD1 (ENSOANG00000037696) ANKRD2 (ENSOANG00000003462) HOGA1 (ENSOANG00000013061) MORN4 (ENSOANG00000042957) PI4K2A (ENSOANG00000043690) AVPI1 (ENSOANG00000040881) MARVELD1 (ENSOANG00000009255) ZFYVE27 (ENSOANG00000006007) SFRP5 (ENSOANG00000043234) GOLGA7B (ENSOANG00000047632) CRTAC1 (ENSOANG00000010461) ENSOANG00000045727 Sauria ANCESTRAL SPECIES 8 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Archelosauria ANCESTRAL SPECIES 10 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Cryptodira ANCESTRAL SPECIES 6 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Chinese turtle MODERN SPECIES 1823 ENSPSIG00000004158 #22 EXOSC1 (ENSPSIG00000013571) ZDHHC16 (ENSPSIG00000013456) ENSPSIG00000013294 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 ENSGT00390000011684 Testudinidae ANCESTRAL SPECIES 9 ENSGT00390000014031 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 ENSGT00390000011684 Goode s thornscrub tortoise MODERN SPECIES 21 FGF8 (ENSGEVG00005004467) NPM3 (ENSGEVG00005004443) OGA (ENSGEVG00005004411) KCNIP2 (ENSGEVG00005004222) ARMH3 (ENSGEVG00005003998) HPS6 (ENSGEVG00005003987) LDB1 (ENSGEVG00005003974) ENSGEVG00005003965 ENSGEVG00005003952 LCOR (ENSGEVG00005003931) SLIT1 (ENSGEVG00005003855) ARHGAP19 (ENSGEVG00005003823) ENSGEVG00005003767 UBTD1 (ENSGEVG00005003758) ENSGEVG00005003749 ENSGEVG00005003730 #22 ENSGEVG00005003669 ENSGEVG00005003635 ZDHHC16 (ENSGEVG00005003602) ENSGEVG00005003466 ENSGEVG00005003440 HOGA1 (ENSGEVG00005003381) MORN4 (ENSGEVG00005003350) PI4K2A (ENSGEVG00005003337) AVPI1 (ENSGEVG00005003324) MARVELD1 (ENSGEVG00005003317) ZFYVE27 (ENSGEVG00005003269) ENSGEVG00005003246 ENSGEVG00005003240 ENSGEVG00005003202 R3HCC1L (ENSGEVG00005003179) Abingdon island giant tortoise MODERN SPECIES 808 ARHGAP19 (ENSCABG00000015943) RRP12 (ENSCABG00000015981) ENSCABG00000016470 #22 EXOSC1 (ENSCABG00000016471) Emydidae ANCESTRAL SPECIES 6 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Three-toed box turtle MODERN SPECIES 812 ENSTMTG00000011750 #22 EXOSC1 (ENSTMTG00000011507) painted turtle MODERN SPECIES 2388 NPM3 (ENSCPBG00000003817) OGA (ENSCPBG00000003826) KCNIP2 (ENSCPBG00000003838) ARMH3 (ENSCPBG00000003975) HPS6 (ENSCPBG00000005375) ENSCPBG00000005394 LDB1 (ENSCPBG00000005401) PPRC1 (ENSCPBG00000005408) ENSCPBG00000005413 LCOR (ENSCPBG00000005416) SLIT1 (ENSCPBG00000005963) ARHGAP19 (ENSCPBG00000011924) ENSCPBG00000011932 RRP12 (ENSCPBG00000011935) ENSCPBG00000011944 ENSCPBG00000011948 #22 EXOSC1 (ENSCPBG00000011949) ZDHHC16 (ENSCPBG00000011953) MMS19 (ENSCPBG00000011957) UBTD1 (ENSCPBG00000011961) ANKRD2 (ENSCPBG00000011964) HOGA1 (ENSCPBG00000011974) MORN4 (ENSCPBG00000012166) PI4K2A (ENSCPBG00000012171) AVPI1 (ENSCPBG00000012176) MARVELD1 (ENSCPBG00000012178) ZFYVE27 (ENSCPBG00000012184) GOLGA7B (ENSCPBG00000012188) CRTAC1 (ENSCPBG00000012190) ENSCPBG00000012195 LOXL4 (ENSCPBG00000012198) Archosauria ANCESTRAL SPECIES 7 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Australian saltwater crocodile MODERN SPECIES 68 DPCD (ENSCPRG00005013153) ENSCPRG00005013155 ENSCPRG00005013157 FGF8 (ENSCPRG00005013159) NPM3 (ENSCPRG00005013161) OGA (ENSCPRG00005013170) KCNIP2 (ENSCPRG00005013176) ARMH3 (ENSCPRG00005013194) HPS6 (ENSCPRG00005013211) LDB1 (ENSCPRG00005013215) PPRC1 (ENSCPRG00005013227) LCOR (ENSCPRG00005013234) SLIT1 (ENSCPRG00005013244) ARHGAP19 (ENSCPRG00005013266) ENSCPRG00005013313 ENSCPRG00005013535 #22 ZDHHC16 (ENSCPRG00005013550) EXOSC1 (ENSCPRG00005013566) ANKRD2 (ENSCPRG00005013635) HOGA1 (ENSCPRG00005013640) MORN4 (ENSCPRG00005013645) PI4K2A (ENSCPRG00005013650) MARVELD1 (ENSCPRG00005013655) ZFYVE27 (ENSCPRG00005013662) GOLGA7B (ENSCPRG00005013674) SFRP5 (ENSCPRG00005013682) CRTAC1 (ENSCPRG00005013685) ENSCPRG00005013691 LOXL4 (ENSCPRG00005013693) HPS1 (ENSCPRG00005013698) HPSE2 (ENSCPRG00005013713) Aves ANCESTRAL SPECIES 6 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b African ostrich MODERN SPECIES 290 ENSSCUG00000001906 POLL (ENSSCUG00000001904) DPCD (ENSSCUG00000001903) FBXW4 (ENSSCUG00000001902) FGF8 (ENSSCUG00000001901) NPM3 (ENSSCUG00000001900) OGA (ENSSCUG00000001899) KCNIP2 (ENSSCUG00000001896) ARMH3 (ENSSCUG00000001895) HPS6 (ENSSCUG00000001892) LDB1 (ENSSCUG00000001889) ENSSCUG00000001887 LCOR (ENSSCUG00000001884) ARHGAP19 (ENSSCUG00000001882) RRP12 (ENSSCUG00000001878) ENSSCUG00000001876 #22 EXOSC1 (ENSSCUG00000001873) ZDHHC16 (ENSSCUG00000001868) MMS19 (ENSSCUG00000001785) ENSSCUG00000001716 PI4K2A (ENSSCUG00000001713) MARVELD1 (ENSSCUG00000001711) ZFYVE27 (ENSSCUG00000001709) ENSSCUG00000001705 GOLGA7B (ENSSCUG00000001701) Neognathae ANCESTRAL SPECIES 7 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Neognathae_b ANCESTRAL SPECIES 8 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Neognathae_c ANCESTRAL SPECIES 8 ENSGT00390000014031 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798.d ENSGT00390000002554 ENSGT00390000001546 ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Kakapo MODERN SPECIES 22 POLL (ENSSHBG00005002157) DPCD (ENSSHBG00005002126) FBXW4 (ENSSHBG00005002093) FGF8 (ENSSHBG00005002055) NPM3 (ENSSHBG00005002019) OGA (ENSSHBG00005001995) ENSSHBG00005001961 ARMH3 (ENSSHBG00005001905) HPS6 (ENSSHBG00005001864) LDB1 (ENSSHBG00005001841) PPRC1 (ENSSHBG00005001811) LCOR (ENSSHBG00005001762) SLIT1 (ENSSHBG00005021002) ARHGAP19 (ENSSHBG00005020983) RRP12 (ENSSHBG00005020977) ENSSHBG00005020970 #22 EXOSC1 (ENSSHBG00005020963) ZDHHC16 (ENSSHBG00005020956) MMS19 (ENSSHBG00005020943) UBTD1 (ENSSHBG00005020933) ANKRD2 (ENSSHBG00005020924) HOGA1 (ENSSHBG00005020914) PI4K2A (ENSSHBG00005020904) AVPI1 (ENSSHBG00005020896) MARVELD1 (ENSSHBG00005020893) ZFYVE27 (ENSSHBG00005020886) SFRP5 (ENSSHBG00005020880) GOLGA7B (ENSSHBG00005020876) CRTAC1 (ENSSHBG00005020869) R3HCC1L (ENSSHBG00005020866) LOXL4 (ENSSHBG00005020859) Golden eagle MODERN SPECIES 2 DPCD (ENSACCG00020009630) FBXW4 (ENSACCG00020009662) FGF8 (ENSACCG00020009686) NPM3 (ENSACCG00020009702) OGA (ENSACCG00020009722) KCNIP2 (ENSACCG00020009741) ARMH3 (ENSACCG00020009789) HPS6 (ENSACCG00020009815) LDB1 (ENSACCG00020009835) PPRC1 (ENSACCG00020009873) ENSACCG00020009903 LCOR (ENSACCG00020009912) SLIT1 (ENSACCG00020009931) ARHGAP19 (ENSACCG00020009952) RRP12 (ENSACCG00020009977) ENSACCG00020010002 #22 EXOSC1 (ENSACCG00020000443) ZDHHC16 (ENSACCG00020000500) MMS19 (ENSACCG00020000544) UBTD1 (ENSACCG00020000581) ANKRD2 (ENSACCG00020000618) HOGA1 (ENSACCG00020000638) MORN4 (ENSACCG00020000670) PI4K2A (ENSACCG00020000698) AVPI1 (ENSACCG00020000729) ZFYVE27 (ENSACCG00020000789) SFRP5 (ENSACCG00020000820) GOLGA7B (ENSACCG00020000849) CRTAC1 (ENSACCG00020000882) R3HCC1L (ENSACCG00020000919) LOXL4 (ENSACCG00020001067) Passeriformes ANCESTRAL SPECIES 10 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00960000193282 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 Great tit MODERN SPECIES 26 FBXW4 (ENSPMJG00000004570) FGF8 (ENSPMJG00000004565) NPM3 (ENSPMJG00000004562) OGA (ENSPMJG00000004530) ENSPMJG00000004497 KCNIP2 (ENSPMJG00000004479) ARMH3 (ENSPMJG00000004471) HPS6 (ENSPMJG00000004470) ENSPMJG00000004456 LDB1 (ENSPMJG00000004435) PPRC1 (ENSPMJG00000004431) LCOR (ENSPMJG00000004409) SLIT1 (ENSPMJG00000004400) ARHGAP19 (ENSPMJG00000004396) RRP12 (ENSPMJG00000004387) ENSPMJG00000004385 #22 EXOSC1 (ENSPMJG00000004134) ZDHHC16 (ENSPMJG00000004117) MMS19 (ENSPMJG00000004087) UBTD1 (ENSPMJG00000004084) ANKRD2 (ENSPMJG00000004080) HOGA1 (ENSPMJG00000004076) MORN4 (ENSPMJG00000004071) PI4K2A (ENSPMJG00000004066) ENSPMJG00000004065 MARVELD1 (ENSPMJG00000004062) ZFYVE27 (ENSPMJG00000004057) SFRP5 (ENSPMJG00000004031) GOLGA7B (ENSPMJG00000004029) CRTAC1 (ENSPMJG00000004009) R3HCC1L (ENSPMJG00000003997) Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Flycatcher MODERN SPECIES 25 DPCD (ENSFALG00000008617) FBXW4 (ENSFALG00000008613) FGF8 (ENSFALG00000024705) NPM3 (ENSFALG00000008586) OGA (ENSFALG00000008580) KCNIP2 (ENSFALG00000008575) ARMH3 (ENSFALG00000008569) HPS6 (ENSFALG00000022918) ENSFALG00000008528 PPRC1 (ENSFALG00000008489) LDB1 (ENSFALG00000008498) LCOR (ENSFALG00000025098) SLIT1 (ENSFALG00000008472) ARHGAP19 (ENSFALG00000008462) RRP12 (ENSFALG00000008458) ENSFALG00000008454 #22 EXOSC1 (ENSFALG00000008450) ZDHHC16 (ENSFALG00000008446) MMS19 (ENSFALG00000008442) UBTD1 (ENSFALG00000008438) ANKRD2 (ENSFALG00000008427) HOGA1 (ENSFALG00000024169) MORN4 (ENSFALG00000008422) PI4K2A (ENSFALG00000028831) ENSFALG00000025983 ZFYVE27 (ENSFALG00000008374) SFRP5 (ENSFALG00000008364) GOLGA7B (ENSFALG00000008361) CRTAC1 (ENSFALG00000008358) R3HCC1L (ENSFALG00000008355) LOXL4 (ENSFALG00000008346) Passeriformes_g ANCESTRAL SPECIES 8 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Medium ground finch MODERN SPECIES 3 POLL (ENSGFOG00000003670) DPCD (ENSGFOG00000003687) FBXW4 (ENSGFOG00000003718) FGF8 (ENSGFOG00000003860) NPM3 (ENSGFOG00000003871) OGA (ENSGFOG00000003883) KCNIP2 (ENSGFOG00000003914) ARMH3 (ENSGFOG00000003948) LDB1 (ENSGFOG00000003999) ENSGFOG00000004011 ENSGFOG00000004024 LCOR (ENSGFOG00000004029) SLIT1 (ENSGFOG00000004119) ARHGAP19 (ENSGFOG00000007827) RRP12 (ENSGFOG00000007841) ENSGFOG00000007868 #22 EXOSC1 (ENSGFOG00000007885) ZDHHC16 (ENSGFOG00000007902) MMS19 (ENSGFOG00000007914) UBTD1 (ENSGFOG00000007936) ANKRD2 (ENSGFOG00000007941) HOGA1 (ENSGFOG00000007950) MORN4 (ENSGFOG00000007960) PI4K2A (ENSGFOG00000007984) ZFYVE27 (ENSGFOG00000008036) SFRP5 (ENSGFOG00000008046) GOLGA7B (ENSGFOG00000008054) CRTAC1 (ENSGFOG00000008070) R3HCC1L (ENSGFOG00000008093) LOXL4 (ENSGFOG00000008104) PYROXD2 (ENSGFOG00000008141) Passeroidea ANCESTRAL SPECIES 7 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 Zebra finch MODERN SPECIES 28 DPCD (ENSTGUG00000009967) FBXW4 (ENSTGUG00000009903) FGF8 (ENSTGUG00000009956) NPM3 (ENSTGUG00000009948) OGA (ENSTGUG00000009938) KCNIP2 (ENSTGUG00000009911) ARMH3 (ENSTGUG00000009880) HPS6 (ENSTGUG00000009875) ENSTGUG00000009862 LDB1 (ENSTGUG00000009855) PPRC1 (ENSTGUG00000009839) LCOR (ENSTGUG00000009834) SLIT1 (ENSTGUG00000009734) ARHGAP19 (ENSTGUG00000009730) RRP12 (ENSTGUG00000009711) ENSTGUG00000021202 #22 EXOSC1 (ENSTGUG00000009692) ZDHHC16 (ENSTGUG00000009668) MMS19 (ENSTGUG00000009642) UBTD1 (ENSTGUG00000009637) ANKRD2 (ENSTGUG00000022547) HOGA1 (ENSTGUG00000009624) MORN4 (ENSTGUG00000009616) PI4K2A (ENSTGUG00000009606) AVPI1 (ENSTGUG00000025747) ZFYVE27 (ENSTGUG00000009586) SFRP5 (ENSTGUG00000023601) GOLGA7B (ENSTGUG00000026467) CRTAC1 (ENSTGUG00000009582) R3HCC1L (ENSTGUG00000009574) LOXL4 (ENSTGUG00000009546) Common canary MODERN SPECIES 7 DPCD (ENSSCAG00000016547) FBXW4 (ENSSCAG00000016551) FGF8 (ENSSCAG00000016555) NPM3 (ENSSCAG00000016557) OGA (ENSSCAG00000016559) KCNIP2 (ENSSCAG00000016561) ARMH3 (ENSSCAG00000016565) HPS6 (ENSSCAG00000016571) LDB1 (ENSSCAG00000016573) ENSSCAG00000016575 ENSSCAG00000016579 ENSSCAG00000016580 SLIT1 (ENSSCAG00000016584) ARHGAP19 (ENSSCAG00000016588) RRP12 (ENSSCAG00000016597) ENSSCAG00000016605 #22 EXOSC1 (ENSSCAG00000016610) ZDHHC16 (ENSSCAG00000016614) UBTD1 (ENSSCAG00000016648) ANKRD2 (ENSSCAG00000016650) HOGA1 (ENSSCAG00000016653) MORN4 (ENSSCAG00000016656) ZFYVE27 (ENSSCAG00000016659) SFRP5 (ENSSCAG00000016665) GOLGA7B (ENSSCAG00000016669) CRTAC1 (ENSSCAG00000016674) ENSSCAG00000016682 LOXL4 (ENSSCAG00000016687) PYROXD2 (ENSSCAG00000016694) HPS1 (ENSSCAG00000016709) HPSE2 (ENSSCAG00000016715) Galloanserae ANCESTRAL SPECIES 6 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Anatidae ANCESTRAL SPECIES 4 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00390000010434.b ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b ENSGT00940000157042 ENSGT00390000011684 Pink-footed goose MODERN SPECIES 11 DPCD (ENSABRG00000007691) FBXW4 (ENSABRG00000007699) FGF8 (ENSABRG00000007708) NPM3 (ENSABRG00000007714) OGA (ENSABRG00000007745) KCNIP2 (ENSABRG00000007767) ARMH3 (ENSABRG00000007775) ENSABRG00000007812 LDB1 (ENSABRG00000007841) PPRC1 (ENSABRG00000007859) LCOR (ENSABRG00000007875) SLIT1 (ENSABRG00000007893) ENSABRG00000007944 ARHGAP19 (ENSABRG00000007950) RRP12 (ENSABRG00000007978) ENSABRG00000007994 #22 EXOSC1 (ENSABRG00000008001) ZDHHC16 (ENSABRG00000008020) MMS19 (ENSABRG00000008035) UBTD1 (ENSABRG00000008082) ANKRD2 (ENSABRG00000008091) HOGA1 (ENSABRG00000008109) PI4K2A (ENSABRG00000008151) MARVELD1 (ENSABRG00000008311) ZFYVE27 (ENSABRG00000008327) SFRP5 (ENSABRG00000008364) GOLGA7B (ENSABRG00000008376) CRTAC1 (ENSABRG00000008392) R3HCC1L (ENSABRG00000008410) LOXL4 (ENSABRG00000008428) PYROXD2 (ENSABRG00000008449) Duck MODERN SPECIES 165 ENSAPLG00000016572 #22 Phasianidae ANCESTRAL SPECIES 6 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Japanese quail MODERN SPECIES 24 DPCD (ENSCJPG00005019857) FBXW4 (ENSCJPG00005019856) FGF8 (ENSCJPG00005019855) NPM3 (ENSCJPG00005019854) OGA (ENSCJPG00005019752) KCNIP2 (ENSCJPG00005019751) ARMH3 (ENSCJPG00005019742) HPS6 (ENSCJPG00005019741) LDB1 (ENSCJPG00005019740) ENSCJPG00005019739 ENSCJPG00005019738 ENSCJPG00005019737 LCOR (ENSCJPG00005019736) SLIT1 (ENSCJPG00005019620) ARHGAP19 (ENSCJPG00005019619) ENSCJPG00005019616 #22 EXOSC1 (ENSCJPG00005019603) ZDHHC16 (ENSCJPG00005019580) UBTD1 (ENSCJPG00005019554) ANKRD2 (ENSCJPG00005019553) HOGA1 (ENSCJPG00005019552) MORN4 (ENSCJPG00005019551) PI4K2A (ENSCJPG00005019548) ENSCJPG00005019547 MARVELD1 (ENSCJPG00005019546) ZFYVE27 (ENSCJPG00005019545) SFRP5 (ENSCJPG00005019544) GOLGA7B (ENSCJPG00005019543) CRTAC1 (ENSCJPG00005019542) ENSCJPG00005019540 LOXL4 (ENSCJPG00005019538) Phasianidae_b ANCESTRAL SPECIES 6 ENSGT00390000014031 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Turkey MODERN SPECIES 28 DPCD (ENSMGAG00000010112) FBXW4 (ENSMGAG00000010100) FGF8 (ENSMGAG00000015335) NPM3 (ENSMGAG00000019749) OGA (ENSMGAG00000010077) KCNIP2 (ENSMGAG00000010045) ARMH3 (ENSMGAG00000009992) HPS6 (ENSMGAG00000002655) ENSMGAG00000002659 LDB1 (ENSMGAG00000009961) PPRC1 (ENSMGAG00000010023) LCOR (ENSMGAG00000009950) SLIT1 (ENSMGAG00000009859) ARHGAP19 (ENSMGAG00000009856) RRP12 (ENSMGAG00000009829) ENSMGAG00000009817 #22 EXOSC1 (ENSMGAG00000018256) ZDHHC16 (ENSMGAG00000009803) MMS19 (ENSMGAG00000009774) UBTD1 (ENSMGAG00000020222) ANKRD2 (ENSMGAG00000009758) HOGA1 (ENSMGAG00000009750) MORN4 (ENSMGAG00000009733) PI4K2A (ENSMGAG00000009723) ZFYVE27 (ENSMGAG00000009699) SFRP5 (ENSMGAG00000009698) GOLGA7B (ENSMGAG00000009694) CRTAC1 (ENSMGAG00000009664) R3HCC1L (ENSMGAG00000009654) LOXL4 (ENSMGAG00000009627) ENSMGAG00000009576 Chicken MODERN SPECIES 35 DPCD (ENSGALG00010019139) FBXW4 (ENSGALG00010023185) FGF8 (ENSGALG00010021040) NPM3 (ENSGALG00010021034) MGEA5 (ENSGALG00010021023) KCNIP2 (ENSGALG00010021012) C6H10orf76 (ENSGALG00010020970) HPS6 (ENSGALG00010020949) ENSGALG00010020941 LDB1 (ENSGALG00010020921) PPRC1 (ENSGALG00010020889) LCOR (ENSGALG00010020866) SLIT1 (ENSGALG00010020778) ARHGAP19 (ENSGALG00010020759) RRP12 (ENSGALG00010020730) PGAM1 (ENSGALG00010020714) #22 EXOSC1 (ENSGALG00010020705) ZDHHC16 (ENSGALG00010020682) MMS19 (ENSGALG00010020673) UBTD1 (ENSGALG00010020667) ANKRD2 (ENSGALG00010020642) HOGA1 (ENSGALG00010020633) MORN4 (ENSGALG00010020626) PI4K2A (ENSGALG00010020616) AVPI1 (ENSGALG00010020609) MARVELD1 (ENSGALG00010022840) ZFYVE27 (ENSGALG00010020595) SFRP5 (ENSGALG00010017808) GOLGA7B (ENSGALG00010017891) CRTAC1 (ENSGALG00010023163) R3HCC1L (ENSGALG00010017790) Lepidosauria ANCESTRAL SPECIES 8 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b tuatara MODERN SPECIES 1056 FBXW4 (ENSSPUG00000011804) FGF8 (ENSSPUG00000011861) NPM3 (ENSSPUG00000011875) OGA (ENSSPUG00000011899) KCNIP2 (ENSSPUG00000011942) ARMH3 (ENSSPUG00000011969) ENSSPUG00000012022 LDB1 (ENSSPUG00000012060) ENSSPUG00000012068 ENSSPUG00000012079 ENSSPUG00000012101 ENSSPUG00000012129 SLIT1 (ENSSPUG00000012148) ARHGAP19 (ENSSPUG00000012197) RRP12 (ENSSPUG00000012221) ENSSPUG00000012251 #22 EXOSC1 (ENSSPUG00000012263) ZDHHC16 (ENSSPUG00000012276) MMS19 (ENSSPUG00000012382) UBTD1 (ENSSPUG00000012702) ANKRD2 (ENSSPUG00000012723) HOGA1 (ENSSPUG00000012791) MORN4 (ENSSPUG00000012878) PI4K2A (ENSSPUG00000012888) AVPI1 (ENSSPUG00000012899) MARVELD1 (ENSSPUG00000012901) ZFYVE27 (ENSSPUG00000012905) SFRP5 (ENSSPUG00000012919) GOLGA7B (ENSSPUG00000012927) CRTAC1 (ENSSPUG00000012944) ENSSPUG00000012961 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Laterata ANCESTRAL SPECIES ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Common wall lizard MODERN SPECIES 13 ENSPMRG00000000700 FGF8 (ENSPMRG00000000710) NPM3 (ENSPMRG00000000732) OGA (ENSPMRG00000000747) KCNIP2 (ENSPMRG00000000777) ARMH3 (ENSPMRG00000000804) HPS6 (ENSPMRG00000000861) LDB1 (ENSPMRG00000000892) PPRC1 (ENSPMRG00000000943) ENSPMRG00000000986 ENSPMRG00000001008 LCOR (ENSPMRG00000001039) SLIT1 (ENSPMRG00000001494) ARHGAP19 (ENSPMRG00000002746) RRP12 (ENSPMRG00000002801) ENSPMRG00000002824 #22 EXOSC1 (ENSPMRG00000002866) ZDHHC16 (ENSPMRG00000002918) MMS19 (ENSPMRG00000002937) UBTD1 (ENSPMRG00000002956) ANKRD2 (ENSPMRG00000002965) HOGA1 (ENSPMRG00000002970) MORN4 (ENSPMRG00000002981) PI4K2A (ENSPMRG00000002999) AVPI1 (ENSPMRG00000003011) MARVELD1 (ENSPMRG00000003018) ZFYVE27 (ENSPMRG00000003032) SFRP5 (ENSPMRG00000003057) GOLGA7B (ENSPMRG00000003064) CRTAC1 (ENSPMRG00000003081) R3HCC1L (ENSPMRG00000003100) Argentine black and white tegu MODERN SPECIES 19 FBXW4 (ENSSMRG00000021665) FGF8 (ENSSMRG00000021666) NPM3 (ENSSMRG00000021667) OGA (ENSSMRG00000021668) KCNIP2 (ENSSMRG00000021669) ARMH3 (ENSSMRG00000021670) HPS6 (ENSSMRG00000021671) ENSSMRG00000021672 LDB1 (ENSSMRG00000021673) PPRC1 (ENSSMRG00000021674) ENSSMRG00000021675 LCOR (ENSSMRG00000021676) SLIT1 (ENSSMRG00000021677) ARHGAP19 (ENSSMRG00000021678) RRP12 (ENSSMRG00000021679) ENSSMRG00000021680 #22 EXOSC1 (ENSSMRG00000021681) ZDHHC16 (ENSSMRG00000021682) MMS19 (ENSSMRG00000021683) UBTD1 (ENSSMRG00000021684) ANKRD2 (ENSSMRG00000021685) HOGA1 (ENSSMRG00000021686) MORN4 (ENSSMRG00000021687) PI4K2A (ENSSMRG00000021688) AVPI1 (ENSSMRG00000021689) MARVELD1 (ENSSMRG00000021690) ZFYVE27 (ENSSMRG00000021691) SFRP5 (ENSSMRG00000021692) GOLGA7B (ENSSMRG00000021693) CRTAC1 (ENSSMRG00000021695) R3HCC1L (ENSSMRG00000021696) Toxicofera ANCESTRAL SPECIES 2 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Elapidae ANCESTRAL SPECIES 4 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Indian cobra MODERN SPECIES 3 DPCD (ENSNNAG00000015439) FBXW4 (ENSNNAG00000015475) FGF8 (ENSNNAG00000015504) NPM3 (ENSNNAG00000015516) OGA (ENSNNAG00000015525) KCNIP2 (ENSNNAG00000015571) ARMH3 (ENSNNAG00000015743) HPS6 (ENSNNAG00000015864) ENSNNAG00000015868 LDB1 (ENSNNAG00000015901) PPRC1 (ENSNNAG00000015952) LCOR (ENSNNAG00000016005) SLIT1 (ENSNNAG00000016033) ARHGAP19 (ENSNNAG00000016110) RRP12 (ENSNNAG00000016135) ENSNNAG00000003029 #22 EXOSC1 (ENSNNAG00000003048) ZDHHC16 (ENSNNAG00000003057) MMS19 (ENSNNAG00000003085) UBTD1 (ENSNNAG00000003131) ANKRD2 (ENSNNAG00000003134) HOGA1 (ENSNNAG00000003149) MORN4 (ENSNNAG00000003159) PI4K2A (ENSNNAG00000003173) ENSNNAG00000003189 MARVELD1 (ENSNNAG00000003201) ZFYVE27 (ENSNNAG00000003209) SFRP5 (ENSNNAG00000003224) GOLGA7B (ENSNNAG00000003241) CRTAC1 (ENSNNAG00000003254) R3HCC1L (ENSNNAG00000003273) Elapidae_a ANCESTRAL SPECIES ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00390000005029 ENSGT00940000159518 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.b ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT00390000013106 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Mainland tiger snake MODERN SPECIES OGA (ENSNSUG00000006678) KCNIP2 (ENSNSUG00000006925) ENSNSUG00000006959 ENSNSUG00000007024 ENSNSUG00000007025 ENSNSUG00000007026 HPS6 (ENSNSUG00000007027) LDB1 (ENSNSUG00000007029) ENSNSUG00000007041 ENSNSUG00000007043 ENSNSUG00000007044 LCOR (ENSNSUG00000007045) SLIT1 (ENSNSUG00000007046) ARHGAP19 (ENSNSUG00000007052) RRP12 (ENSNSUG00000007058) ENSNSUG00000007223 #22 EXOSC1 (ENSNSUG00000007224) ZDHHC16 (ENSNSUG00000007225) MMS19 (ENSNSUG00000007231) UBTD1 (ENSNSUG00000007330) ANKRD2 (ENSNSUG00000007333) HOGA1 (ENSNSUG00000007381) MORN4 (ENSNSUG00000007384) PI4K2A (ENSNSUG00000007385) AVPI1 (ENSNSUG00000007386) MARVELD1 (ENSNSUG00000007387) ZFYVE27 (ENSNSUG00000007388) SFRP5 (ENSNSUG00000007389) GOLGA7B (ENSNSUG00000007400) CRTAC1 (ENSNSUG00000007402) R3HCC1L (ENSNSUG00000007415) Eastern brown snake MODERN SPECIES 16 DPCD (ENSPTXG00000018417) FBXW4 (ENSPTXG00000018418) FGF8 (ENSPTXG00000018420) NPM3 (ENSPTXG00000018421) OGA (ENSPTXG00000018422) KCNIP2 (ENSPTXG00000018423) ARMH3 (ENSPTXG00000018430) HPS6 (ENSPTXG00000018431) LDB1 (ENSPTXG00000018432) PPRC1 (ENSPTXG00000018433) ENSPTXG00000018434 LCOR (ENSPTXG00000018435) SLIT1 (ENSPTXG00000018436) ENSPTXG00000018441 RRP12 (ENSPTXG00000018443) ENSPTXG00000018444 #22 EXOSC1 (ENSPTXG00000018445) ZDHHC16 (ENSPTXG00000018446) UBTD1 (ENSPTXG00000018447) ANKRD2 (ENSPTXG00000018448) HOGA1 (ENSPTXG00000018458) MORN4 (ENSPTXG00000018460) PI4K2A (ENSPTXG00000018462) AVPI1 (ENSPTXG00000018464) MARVELD1 (ENSPTXG00000018465) ZFYVE27 (ENSPTXG00000018467) SFRP5 (ENSPTXG00000018469) GOLGA7B (ENSPTXG00000018471) CRTAC1 (ENSPTXG00000018473) R3HCC1L (ENSPTXG00000018476) LOXL4 (ENSPTXG00000018477) Blue-lipped sea krait MODERN SPECIES 5121 ARHGAP19 (ENSLLTG00000010055) RRP12 (ENSLLTG00000010103) ENSLLTG00000010187 #22 EXOSC1 (ENSLLTG00000010201) ZDHHC16 (ENSLLTG00000010230) MMS19 (ENSLLTG00000010289) UBTD1 (ENSLLTG00000010462) ANKRD2 (ENSLLTG00000010491) HOGA1 (ENSLLTG00000011116) MORN4 (ENSLLTG00000011130) PI4K2A (ENSLLTG00000011149) AVPI1 (ENSLLTG00000011164) MARVELD1 (ENSLLTG00000011178) ZFYVE27 (ENSLLTG00000011202) SFRP5 (ENSLLTG00000011244) GOLGA7B (ENSLLTG00000011263) Lizard MODERN SPECIES 1408 ARHGAP19 (ENSACAG00000002351) RRP12 (ENSACAG00000002175) ENSACAG00000002126 #22 EXOSC1 (ENSACAG00000002101) ZDHHC16 (ENSACAG00000001999) ENSACAG00000038894 MMS19 (ENSACAG00000001981) Anura ANCESTRAL SPECIES 25 ENSGT00940000158796 ENSGT00390000007726.a.a ENSGT00940000157798 ENSGT00390000002554 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b ENSGT00950000183137.a ENSGT00940000162611.a ENSGT00940000154965.A ENSGT00940000157322.a ENSGT00940000157331 ENSGT01100000263518.A.b ENSGT00390000013106 ENSGT00940000161460 ENSGT00950000182926.b.d #22 ENSGT00390000015287 ENSGT00940000155032 ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000153956.b ENSGT00530000063604.A ENSGT00730000111173 ENSGT00390000010434.b ENSGT00510000049872 ENSGT00510000049375 ENSGT00390000013298 ENSGT00940000160608 ENSGT00390000000134.a ENSGT00390000013726 ENSGT00530000063711.b Leishan spiny toad MODERN SPECIES 9 ENSLLEG00000007323 LDB1 (ENSLLEG00000008345) ENSLLEG00000008924 ENSLLEG00000008950 PPRC1 (ENSLLEG00000008978) ENSLLEG00000009112 ENSLLEG00000009195 ENSLLEG00000009221 SLIT1 (ENSLLEG00000009277) ARHGAP19 (ENSLLEG00000009651) ENSLLEG00000009929 ENSLLEG00000009979 ENSLLEG00000010017 ENSLLEG00000010118 ENSLLEG00000010948 ENSLLEG00000011089 #22 SCNN1A (ENSLLEG00000011175) TAPBPL (ENSLLEG00000011421) ENSLLEG00000011487 MRPL51 (ENSLLEG00000011509) ENSLLEG00000011570 LPAR5 (ENSLLEG00000011710) ENSLLEG00000011744 CHD4 (ENSLLEG00000011789) NOP2 (ENSLLEG00000012191) IFFO1 (ENSLLEG00000012304) ENSLLEG00000012378 NCAPD2 (ENSLLEG00000012569) ING4 (ENSLLEG00000012932) ZNF384 (ENSLLEG00000013153) ENSLLEG00000013203 Frog MODERN SPECIES 7 ENSXETG00000046014 ENSXETG00000048284 armh3 (ENSXETG00000006269) hps6 (ENSXETG00000006271) ENSXETG00000006272 ldb1 (ENSXETG00000001714) pprc1 (ENSXETG00000037399) lcor (ENSXETG00000046643) slit1 (ENSXETG00000003405) arhgap19 (ENSXETG00000003417) nlk.2 (ENSXETG00000003418) rrp12 (ENSXETG00000003430) XB5832479 [provisional:cdc25c] (ENSXETG00000035778) ENSXETG00000043423 ENSXETG00000043993 pgam1 (ENSXETG00000003433) #22 exosc1 (ENSXETG00000003434) zdhhc16 (ENSXETG00000003436) mms19 (ENSXETG00000003439) ubtd1 (ENSXETG00000039558) ankrd2 (ENSXETG00000003442) hoga1 (ENSXETG00000003443) MORN4 (ENSXETG00000036245) pi4k2a (ENSXETG00000013516) AVPI1 (ENSXETG00000036365) marveld1 (ENSXETG00000042369) ENSXETG00000043898 zfyve27 (ENSXETG00000013529) sfrp5 (ENSXETG00000024699) golga7b (ENSXETG00000039738) crtac1 (ENSXETG00000030508) Coelacanth MODERN SPECIES 447 ZFYVE27 (ENSLACG00000000439) ENSLACG00000005109 MARVELD1 (ENSLACG00000009786) MORN4 (ENSLACG00000010015) HOGA1 (ENSLACG00000010471) ANKRD2 (ENSLACG00000010775) ALDH18A1 (ENSLACG00000011130) ENSLACG00000013828 ENSLACG00000014708 ENSLACG00000015596 C19orf53 (ENSLACG00000016529) ENSLACG00000016578 RRP12 (ENSLACG00000016633) pgam1b (ENSLACG00000016828) #22 ZDHHC16 (ENSLACG00000016928) MMS19 (ENSLACG00000016987) Actinopterygii DUPLICATION Actinopterygii DUPLICATION Actinopterygii ANCESTRAL SPECIES 47 ENSGT00940000162476 ENSGT00940000164861 ENSGT00940000161036.B ENSGT00940000157042 ENSGT00530000063711.b ENSGT00390000013726 ENSGT00390000000134.a ENSGT00940000160608 ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00950000182926.b.d.b #22 ENSGT00940000158630 ENSGT00390000013106 ENSGT00940000166659 ENSGT00950000182926.b.d.a.a #22 ENSGT00390000015287 ENSGT00390000000464 ENSGT00940000155032 ENSGT00390000015583 Reedfish MODERN SPECIES 10 ARHGAP22 (ENSECRG00000022480) mapk8a (ENSECRG00000022512) ENSECRG00000022543 FRMPD2 (ENSECRG00000022556) ENSECRG00000022579 gdf10b (ENSECRG00000022594) gdf2 (ENSECRG00000022614) RBP3 (ENSECRG00000022632) prdm8 (ENSECRG00000022638) ENSECRG00000022645 ENSECRG00000000498 marveld1 (ENSECRG00000000515) ENSECRG00000000520 pi4k2a (ENSECRG00000000543) ENSECRG00000000556 pgam1a (ENSECRG00000000600) #22 exosc1 (ENSECRG00000000620) mettl18 (ENSECRG00000000629) zdhhc16a (ENSECRG00000000641) mms19 (ENSECRG00000000672) ubtd1a (ENSECRG00000000708) rrp12 (ENSECRG00000000727) zfyve27 (ENSECRG00000000762) sfrp5 (ENSECRG00000000825) golga7ba (ENSECRG00000000836) crtac1a (ENSECRG00000000875) ENSECRG00000000944 LOXL4 (ENSECRG00000000973) zgc:123010 (ENSECRG00000001005) pyroxd2 (ENSECRG00000001046) ATP6V0E2 (ENSECRG00000001091) Neopterygii ANCESTRAL SPECIES 424 ENSGT00940000166659 ENSGT00950000182926.b.d.a.a #22 ENSGT00390000015287 ENSGT00390000000464 ENSGT00940000155032 ENSGT00390000015583 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 15 ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287 ENSGT00940000155032.k ENSGT00390000000464 ENSGT00940000155032.l ENSGT00390000015583 ENSGT00940000158630 ENSGT00940000157727.x.a ENSGT00390000014726.c.b ENSGT00390000014726.c.a ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000161964 ENSGT00940000155133.a.a.b ENSGT00940000153692.B.a ENSGT00950000183015.B.a.a Osteoglossiformes ANCESTRAL SPECIES 268 ENSGT00940000168493 ENSGT00940000165889 ENSGT00390000015298 ENSGT00390000004874.a.a ENSGT00940000157556.a.a.b ENSGT00940000165452.a ENSGT00940000157049.a ENSGT00940000164861 ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00940000160608.c ENSGT00940000165757.a.a ENSGT00510000049375.a ENSGT00970000193827.a ENSGT00390000010434.b.b ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287 ENSGT00940000155032.k ENSGT00390000013106 ENSGT00940000156522.d ENSGT00890000139463.b.b.a Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 16 pank2 (ENSSFOG00015009972) LOXL3 (ENSSFOG00015009874) si:dkey-33c12.12 (ENSSFOG00015009425) ENSSFOG00015025743 aup1 (ENSSFOG00015009364) si:dkey-33c12.3 (ENSSFOG00015009342) ENSSFOG00015026641 ENSSFOG00015026617 fgf24 (ENSSFOG00015009316) PCGF1 (ENSSFOG00015009282) lbx2 (ENSSFOG00015029772) ENSSFOG00015009241 si:dkey-33c12.4 (ENSSFOG00015026587) ENSSFOG00015009157 rpia (ENSSFOG00015009127) pgam1b (ENSSFOG00015009115) #22 EXOSC1 (ENSSFOG00015029106) mettl18 (ENSSFOG00015031202) zdhhc16b (ENSSFOG00015009023) mms19 (ENSSFOG00015008989) UBTD1 (ENSSFOG00015032470) ENSSFOG00015008952 RBP3 (ENSSFOG00015008902) gdf2 (ENSSFOG00015032267) gdf10b (ENSSFOG00015008888) ENSSFOG00015008853 mapk8a (ENSSFOG00015008818) ARHGAP22 (ENSSFOG00015008785) LRRC18 (ENSSFOG00015008754) VSTM4 (ENSSFOG00015008686) ENSSFOG00015031744 Asian bonytongue MODERN SPECIES 23 HPSE2 (ENSSFOG00015015866) got1 (ENSSFOG00015015891) ENSSFOG00015032867 nkx3.3 (ENSSFOG00015032059) slc25a28 (ENSSFOG00015015925) ENSSFOG00015015940 pyroxd2 (ENSSFOG00015015984) ENSSFOG00015016044 CRTAC1 (ENSSFOG00015016089) sfrp5 (ENSSFOG00015016130) ENSSFOG00015016149 ENSSFOG00015029493 marveld1 (ENSSFOG00015016233) ENSSFOG00015016242 pi4k2a (ENSSFOG00015016255) ENSSFOG00015016277 #22 exosc1 (ENSSFOG00015016289) zdhhc16a (ENSSFOG00015016331) ubtd1a (ENSSFOG00015027561) rrp12 (ENSSFOG00015016400) ENSSFOG00015016476 prdm8 (ENSSFOG00015016527) GDF10 (ENSSFOG00015016530) ENSSFOG00015025200 ENSSFOG00015016619 mapk8a (ENSSFOG00015016648) ARHGAP22 (ENSSFOG00015016745) ENSSFOG00015016792 LRRC18 (ENSSFOG00015016853) ENSSFOG00015031820 vstm4a (ENSSFOG00015016869) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 18 ENSPKIG00000015279 ENTPD7 (ENSPKIG00000015335) ENSPKIG00000015431 atpv0e2 (ENSPKIG00000015481) zgc:123010 (ENSPKIG00000015521) LOXL4 (ENSPKIG00000015645) ENSPKIG00000015770 golga7ba (ENSPKIG00000015794) sfrp5 (ENSPKIG00000015815) zfyve27 (ENSPKIG00000015847) ENSPKIG00000015911 marveld1 (ENSPKIG00000015922) pi4k2a (ENSPKIG00000015941) ENSPKIG00000015982 cdc25d (ENSPKIG00000015992) ENSPKIG00000016019 #22 exosc1 (ENSPKIG00000016037) mettl18 (ENSPKIG00000016064) zdhhc16b (ENSPKIG00000016077) mms19 (ENSPKIG00000016111) ubtd1b (ENSPKIG00000016156) ENSPKIG00000016181 rbp3 (ENSPKIG00000016226) gdf2 (ENSPKIG00000016271) gdf10b (ENSPKIG00000016359) mapk8b (ENSPKIG00000016402) ARHGAP22 (ENSPKIG00000016496) LRRC18 (ENSPKIG00000016559) VSTM4 (ENSPKIG00000016571) ENSPKIG00000016579 ENSPKIG00000016589 P. kingsleyae MODERN SPECIES 203 blnk (ENSPKIG00000015675) ENSPKIG00000015746 CCNJ (ENSPKIG00000015771) BTAF1 (ENSPKIG00000015810) cpeb3 (ENSPKIG00000015878) marchf5 (ENSPKIG00000015945) ide (ENSPKIG00000016018) kmo (ENSPKIG00000016167) opn3 (ENSPKIG00000016215) sfrp5 (ENSPKIG00000016232) ENSPKIG00000016244 ENSPKIG00000016259 marveld1 (ENSPKIG00000016279) ENSPKIG00000016293 pi4k2a (ENSPKIG00000016311) ENSPKIG00000016351 #22 zdhhc16a (ENSPKIG00000016398) ubtd1a (ENSPKIG00000016465) rrp12 (ENSPKIG00000016516) prdm8 (ENSPKIG00000016628) GDF10 (ENSPKIG00000016639) ENSPKIG00000016650 MAPK8 (ENSPKIG00000016683) ARHGAP22 (ENSPKIG00000016758) ENSPKIG00000016795 ENSPKIG00000016847 LRRC18 (ENSPKIG00000016892) ENSPKIG00000016909 vstm4a (ENSPKIG00000016931) drgx (ENSPKIG00000016958) ENSPKIG00000016992 Clupeocephala ANCESTRAL SPECIES 97 ENSGT00390000004090 ENSGT00940000159703 ENSGT00550000075065.b ENSGT00940000164753.b ENSGT00940000158204.d ENSGT00390000013080 ENSGT01070000253775.b ENSGT00940000156038.a.a ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000159473 ENSGT01030000234810 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Otomorpha ANCESTRAL SPECIES 254 ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000159473 ENSGT00940000155366.b.a.a ENSGT00940000165523.b ENSGT00950000182933.B.a.b.a.j ENSGT00950000182933.B.a.b.b ENSGT00950000182849.B.c.a.b.b ENSGT00940000167543.c ENSGT00940000167543.d ENSGT00940000155366.b.a.b.a ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 Clupeiformes ANCESTRAL SPECIES 146 ENSGT00390000007125.a ENSGT00940000162476 ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.c.b.b ENSGT00510000049375 ENSGT00390000010434.b.p ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00940000158630.g.b ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.f.b ENSGT00940000160066 ENSGT00940000153692.B.b ENSGT00950000183015.B.a.b ENSGT00940000165944 ENSGT00940000155684 ENSGT00390000008566.a ENSGT00730000111333.a Denticle herring MODERN SPECIES 13 MARK1 (ENSDCDG00000026685) ptk7a (ENSDCDG00000027076) soul4 (ENSDCDG00000027155) nup133 (ENSDCDG00000027169) ACTA1 (ENSDCDG00000027243) CCSAP (ENSDCDG00000027245) RHOU (ENSDCDG00000027246) dla (ENSDCDG00000027261) ENSDCDG00000027266 smdt1b (ENSDCDG00000027269) zgc:158803 (ENSDCDG00000027270) pane1 (ENSDCDG00000027271) mb (ENSDCDG00000027272) ENSDCDG00000027274 ENSDCDG00000027300 pgam1b (ENSDCDG00000027302) #22 exosc1 (ENSDCDG00000027306) ENSDCDG00000027309 gprc5bb (ENSDCDG00000027310) GPR139 (ENSDCDG00000027311) si:ch211-202h22.8 (ENSDCDG00000027312) tekt4 (ENSDCDG00000027315) ENSDCDG00000027316 ENSDCDG00000027326 TSC2 (ENSDCDG00000027385) NTHL1 (ENSDCDG00000031283) NHERF2 (ENSDCDG00000031293) TNPO2 (ENSDCDG00000031306) rln3b (ENSDCDG00000031382) RFX1 (ENSDCDG00000031412) DCAF15 (ENSDCDG00000031736) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 18 aftpha (ENSCHAG00000012103) ENSCHAG00000012014 vps54 (ENSCHAG00000011092) cct6a (ENSCHAG00000010792) sumf2 (ENSCHAG00000010633) ENSCHAG00000010630 ENSCHAG00000010620 mis12 (ENSCHAG00000010606) ENSCHAG00000010601 golga7ba (ENSCHAG00000010531) zfyve27 (ENSCHAG00000010413) zgc:171482 (ENSCHAG00000010390) ENSCHAG00000010367 ENSCHAG00000010349 pi4k2a (ENSCHAG00000010291) pgam1b (ENSCHAG00000010262) #22 exosc1 (ENSCHAG00000010158) ENSCHAG00000010140 gprc5bb (ENSCHAG00000010126) GPR139 (ENSCHAG00000010044) si:ch211-202h22.9 (ENSCHAG00000009953) tekt4 (ENSCHAG00000009938) ENSCHAG00000009929 ENSCHAG00000009620 TSC2 (ENSCHAG00000009136) NTHL1 (ENSCHAG00000009107) NHERF2 (ENSCHAG00000009103) TNPO2 (ENSCHAG00000009010) rln3b (ENSCHAG00000008973) RFX1 (ENSCHAG00000008717) DCAF15 (ENSCHAG00000008698) Atlantic herring MODERN SPECIES 4 got1 (ENSCHAG00000006994) ENSCHAG00000007034 nkx2.3 (ENSCHAG00000007059) got1 (ENSCHAG00000007159) ENSCHAG00000007211 slc25a28 (ENSCHAG00000007238) pyroxd2 (ENSCHAG00000007272) zgc:123010 (ENSCHAG00000008078) LOXL4 (ENSCHAG00000008097) CRTAC1 (ENSCHAG00000008481) GOLGA7B (ENSCHAG00000008889) sfrp5 (ENSCHAG00000009066) zgc:171482 (ENSCHAG00000009081) marveld1 (ENSCHAG00000009102) PI4K2A (ENSCHAG00000009115) ENSCHAG00000009123 #22 mettl18 (ENSCHAG00000009147) zdhhc16a (ENSCHAG00000009157) ubtd1b (ENSCHAG00000009204) rrp12 (ENSCHAG00000009235) ENSCHAG00000009324 prdm8 (ENSCHAG00000009333) GDF10 (ENSCHAG00000009341) ENSCHAG00000009398 mapk8a (ENSCHAG00000009439) ARHGAP22 (ENSCHAG00000011051) ENSCHAG00000011174 ENSCHAG00000011191 LRRC18 (ENSCHAG00000011198) ENSCHAG00000011220 ENSCHAG00000011259 Otophysi ANCESTRAL SPECIES 28 ENSGT00940000154186.a.r ENSGT00940000155337.`b ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00390000000583 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543.d ENSGT00940000155366.b.a.b.a ENSGT00940000167543.c ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b Cyprinoidei ANCESTRAL SPECIES 30 ENSGT00940000155337.`b ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00390000000583 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT01030000234958 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543.d ENSGT00940000155366.b.a.b.a.b ENSGT00940000155366.b.a.b.a.a ENSGT00940000167543.c.a ENSGT00990000206722 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 881 ENSGT00510000049872 ENSGT00390000010434.b.m ENSGT00950000182926.b.d.a.a.a.a.g.a #22 ENSGT00390000015287.b.a.b ENSGT00950000182961.b.c.b ENSGT00940000167543.d ENSGT01030000234810 Goldfish DUPLICATION Goldfish MODERN SPECIES 720 lgalsla (ENSCARG00000059190) ENSCARG00000059181 vps54 (ENSCARG00000058416) ENSCARG00000058382 ENSCARG00000058378 ENSCARG00000058291 ENSCARG00000058266 khsrp (ENSCARG00000056980) golga7ba (ENSCARG00000056903) ENSCARG00000056895 ENSCARG00000056834 pi4k2a (ENSCARG00000056391) pgam1b (ENSCARG00000056370) #22 exosc1 (ENSCARG00000056338) ENSCARG00000056302 gprc5bb (ENSCARG00000056297) ENSCARG00000056290 ENSCARG00000056270 ENSCARG00000056237 tekt4 (ENSCARG00000056199) ENSCARG00000056194 ENSCARG00000056190 ENSCARG00000056185 ENSCARG00000056165 Goldfish MODERN SPECIES 172 ENSCARG00000063684 ENSCARG00000063659 pi4k2a (ENSCARG00000063624) pgam1b (ENSCARG00000063596) #22 exosc1 (ENSCARG00000063563) ENSCARG00000063524 gprc5bb (ENSCARG00000063509) si:ch211-202h22.9 (ENSCARG00000063498) ENSCARG00000063471 tekt4 (ENSCARG00000063444) ENSCARG00000063431 ENSCARG00000063416 ENSCARG00000063385 ENSCARG00000063357 ENSCARG00000063316 Cyprininae_a ANCESTRAL SPECIES 1207 ENSGT00950000182926.b.d.a.a.a.a.g.a #22 ENSGT00390000015287.a.a Common carp reference MODERN SPECIES 27 lgalsla (ENSCCRG00000005755) ENSCCRG00000005752 vps54 (ENSCCRG00000021698) ENSCCRG00000023691 ENSCCRG00000023693 ENSCCRG00000023699 khsrp (ENSCCRG00000023737) ENSCCRG00000023741 crtac1a (ENSCCRG00000023744) golga7ba (ENSCCRG00000076611) zfyve27 (ENSCCRG00000023777) ENSCCRG00000024682 ENSCCRG00000003859 ENSCCRG00000063326 pi4k2a (ENSCCRG00000031717) pgam1b (ENSCCRG00000078246) #22 ENSCCRG00000012530 ENSCCRG00000070687 ENSCCRG00000012540 ENSCCRG00000031315 ENSCCRG00000013921 ENSCCRG00000013926 ENSCCRG00000057864 ENSCCRG00000070636 ENSCCRG00000013932 ENSCCRG00000013923 ENSCCRG00000080661 ENSCCRG00000055869 ENSCCRG00000031975 ENSCCRG00000073825 ENSCCRG00000079627 Cyprininae ANCESTRAL SPECIES 1489 ENSGT00950000182926.b.d.a.a.a.a.g.b #22 ENSGT00390000015287.b.b Cyprininae_a ANCESTRAL SPECIES 1126 ENSGT00950000182926.b.d.a.a.a.a.g.b #22 ENSGT00390000015287.b.b Common carp reference MODERN SPECIES 22 mb (ENSCCRG00000028699) ENSCCRG00000070586 ENSCCRG00000068299 aftpha (ENSCCRG00000068040) lgalsla (ENSCCRG00000057927) ENSCCRG00000077908 vps54 (ENSCCRG00000021668) ENSCCRG00000021673 khsrp (ENSCCRG00000002491) golga7ba (ENSCCRG00000061429) zfyve27 (ENSCCRG00000031705) ENSCCRG00000063636 pi4k2a (ENSCCRG00000024458) cdc25d (ENSCCRG00000024507) ENSCCRG00000081744 pgam1b (ENSCCRG00000065548) #22 exosc1 (ENSCCRG00000024520) gprc5bb (ENSCCRG00000055467) si:ch211-202h22.8 (ENSCCRG00000059845) ENSCCRG00000024541 ENSCCRG00000060345 ENSCCRG00000024536 ENSCCRG00000081325 ENSCCRG00000039008 ENSCCRG00000081340 NTHL1 (ENSCCRG00000025300) ENSCCRG00000077985 ENSCCRG00000039976 rln3b (ENSCCRG00000039926) ENSCCRG00000039923 DCAF15 (ENSCCRG00000039912) Goldfish MODERN SPECIES ENSCARG00000000270 ENSCARG00000000283 aftpha (ENSCARG00000000324) lgalsla (ENSCARG00000000343) ENSCARG00000000354 vps54 (ENSCARG00000000416) zgc:136864 (ENSCARG00000000495) ENSCARG00000000526 khsrp (ENSCARG00000000602) ENSCARG00000000675 golga7ba (ENSCARG00000000685) zfyve27 (ENSCARG00000000715) ENSCARG00000000753 pi4k2a (ENSCARG00000000764) cdc25d (ENSCARG00000000785) pgam1b (ENSCARG00000000796) #22 exosc1 (ENSCARG00000000811) gprc5bb (ENSCARG00000000823) ENSCARG00000000825 si:ch211-202h22.8 (ENSCARG00000000830) ENSCARG00000000833 ENSCARG00000000841 ENSCARG00000000845 ENSCARG00000000853 ENSCARG00000000855 ENSCARG00000000910 TSC2 (ENSCARG00000000987) NTHL1 (ENSCARG00000001022) ENSCARG00000001027 rln3b (ENSCARG00000001042) RFX1 (ENSCARG00000001045) Cyprininae ANCESTRAL SPECIES 1525 ENSGT00940000166659.i.a ENSGT00950000182926.b.d.a.a.a.a.h #22 Cyprininae_a ANCESTRAL SPECIES 64 ENSGT00940000154186.a.r.j ENSGT00940000155337.`b.c ENSGT00950000183050.b.b.b.a.a.a.b.h ENSGT00390000000583.e ENSGT00390000011740.h ENSGT00940000159428.e.a.a ENSGT00940000156051.c.b.b ENSGT00530000063711.b.i.a ENSGT00390000013726.d ENSGT00390000000134.a.f.a ENSGT00390000013298.c ENSGT01030000234958 ENSGT00510000049872 ENSGT00390000010434.b.m ENSGT00940000166659.i.a ENSGT00950000182926.b.d.a.a.a.a.h #22 ENSGT00390000015287.b.a.b ENSGT00950000182961.b.c.b ENSGT00940000167543.d ENSGT00940000155366.b.a.b.a.b.a ENSGT00950000182894.B ENSGT00940000165523.a.b ENSGT00940000167012.b ENSGT00950000183139.C.c ENSGT00510000047513 ENSGT00950000182849.B.c.a.a.f ENSGT00940000156708.a.a.l ENSGT00940000154396.b.a.a.b.e ENSGT01050000244879.a.b.f.a ENSGT00390000011987.i ENSGT00390000017489.b.q.a Golden-line barbel MODERN SPECIES 251 ENSSGRG00000025518 ENSSGRG00000025521 lgalsla (ENSSGRG00000025523) ENSSGRG00000025524 vps54 (ENSSGRG00000025530) zgc:136864 (ENSSGRG00000025726) ENSSGRG00000025730 khsrp (ENSSGRG00000025834) ENSSGRG00000025859 crtac1a (ENSSGRG00000025865) golga7ba (ENSSGRG00000025963) zfyve27 (ENSSGRG00000025965) ENSSGRG00000025966 pi4k2a (ENSSGRG00000025968) cdc25d (ENSSGRG00000025995) pgam1b (ENSSGRG00000025996) #22 exosc1 (ENSSGRG00000026000) gprc5bb (ENSSGRG00000026066) ENSSGRG00000026068 tekt4 (ENSSGRG00000026075) ENSSGRG00000026079 ENSSGRG00000026080 ENSSGRG00000026081 TSC2 (ENSSGRG00000026083) ENSSGRG00000026518 TNPO2 (ENSSGRG00000026522) rln3b (ENSSGRG00000026592) ENSSGRG00000026593 ENSSGRG00000026594 DCAF15 (ENSSGRG00000026595) smdt1b (ENSSGRG00000026600) Zebrafish MODERN SPECIES zgc:136864 (ENSDARG00000059816) vps54 (ENSDARG00000102960) ENSDARG00000028276 ENSDARG00000005690 khsrp (ENSDARG00000026489) ENSDARG00000089243 crtac1a (ENSDARG00000059826) golga7ba (ENSDARG00000036295) zfyve27 (ENSDARG00000059835) ENSDARG00000069264 ENSDARG00000094782 ENSDARG00000091320 ENSDARG00000096214 pi4k2a (ENSDARG00000033666) cdc25d (ENSDARG00000075599) pgam1b (ENSDARG00000014068) #22 exosc1 (ENSDARG00000059841) ENSDARG00000077721 gprc5bb (ENSDARG00000075141) ENSDARG00000073912 si:ch211-202h22.8 (ENSDARG00000078138) si:ch211-202h22.9 (ENSDARG00000079980) tekt4 (ENSDARG00000028899) ENSDARG00000087290 ENSDARG00000111601 ENSDARG00000030417 TSC2 (ENSDARG00000103125) ENSDARG00000116122 NTHL1 (ENSDARG00000042881) ENSDARG00000113474 TNPO2 (ENSDARG00000042887) Characiphysae ANCESTRAL SPECIES 32 ENSGT00940000154186.a.r ENSGT00940000155337.`b ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00390000000583 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Characiphysae_b DUPLICATION Characiphysae_b ANCESTRAL SPECIES 49 ENSGT00940000154186.a.r ENSGT00940000155337.`b ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00390000000583 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a.i #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00990000206722 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Characoidei ANCESTRAL SPECIES 54 ENSGT00940000154186.a.r ENSGT00940000155337.`b ENSGT00950000183050.b.b.b.a.a.a.b ENSGT00390000000583 ENSGT00390000011740 ENSGT00940000161004 ENSGT00940000159428.e.a ENSGT00940000156051.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.f ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a.i #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00990000206722 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Red-bellied piranha MODERN SPECIES 206 lgalsla (ENSPNAG00000012375) ENSPNAG00000012347 vps54 (ENSPNAG00000012220) zgc:136864 (ENSPNAG00000012075) ENSPNAG00000002085 SLC25A23 (ENSPNAG00000012055) khsrp (ENSPNAG00000012026) ENSPNAG00000002051 crtac1a (ENSPNAG00000002039) golga7ba (ENSPNAG00000011927) zfyve27 (ENSPNAG00000002003) ENSPNAG00000001989 ENSPNAG00000011880 pi4k2a (ENSPNAG00000005075) ENSPNAG00000011836 pgam1b (ENSPNAG00000011829) #22 exosc1 (ENSPNAG00000001944) ENSPNAG00000001928 gprc5bb (ENSPNAG00000011789) ENSPNAG00000011778 ENSPNAG00000001920 ENSPNAG00000001909 ENSPNAG00000001899 ENSPNAG00000011745 tekt4 (ENSPNAG00000011732) ENSPNAG00000011726 ENSPNAG00000011720 grid2 (ENSPNAG00000011709) PAOX (ENSPNAG00000011665) Mexicana tetra MODERN SPECIES 3 aftpha (ENSAMXG00000033598) lgalsla (ENSAMXG00000032614) ENSAMXG00000038207 vps54 (ENSAMXG00000011759) ENSAMXG00000030674 ENSAMXG00000011734 ENSAMXG00000011724 khsrp (ENSAMXG00000036582) ENSAMXG00000011674 crtac1a (ENSAMXG00000011545) golga7ba (ENSAMXG00000032870) zfyve27 (ENSAMXG00000040197) ENSAMXG00000024931 pi4k2a (ENSAMXG00000011178) cdc25d (ENSAMXG00000032311) pgam1b (ENSAMXG00000011124) #22 exosc1 (ENSAMXG00000011116) ENSAMXG00000031746 gprc5bb (ENSAMXG00000011098) ENSAMXG00000030328 ENSAMXG00000041397 ENSAMXG00000011050 tekt4 (ENSAMXG00000040608) ENSAMXG00000037908 ENSAMXG00000010725 TSC2 (ENSAMXG00000010507) NTHL1 (ENSAMXG00000010412) ENSAMXG00000032994 NHERF2 (ENSAMXG00000010367) TNPO2 (ENSAMXG00000010427) rln3b (ENSAMXG00000031174) Electric eel MODERN SPECIES 944 khsrp (ENSEEEG00000006451) ENSEEEG00000006450 golga7ba (ENSEEEG00000006428) zfyve27 (ENSEEEG00000006412) ENSEEEG00000006409 pi4k2a (ENSEEEG00000006392) cdc25d (ENSEEEG00000006391) pgam1b (ENSEEEG00000006381) #22 exosc1 (ENSEEEG00000006378) ENSEEEG00000006376 ENSEEEG00000006374 ENSEEEG00000006372 tekt4 (ENSEEEG00000006370) Characiphysae_b ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.a.a.a.j #22 Electric eel DUPLICATION Electric eel MODERN SPECIES 1 ENSEEEG00000001691 LRRC18 (ENSEEEG00000001694) ARHGAP22 (ENSEEEG00000001699) mapk8a (ENSEEEG00000001743) ENSEEEG00000001952 ENSEEEG00000001953 ENSEEEG00000001954 GDF10 (ENSEEEG00000001956) prdm8 (ENSEEEG00000001968) ENSEEEG00000001970 rrp12 (ENSEEEG00000001993) ENSEEEG00000002997 zdhhc16a (ENSEEEG00000003000) mettl18 (ENSEEEG00000003005) ENSEEEG00000003008 #22 ENSEEEG00000003014 #22 marveld1 (ENSEEEG00000003037) ENSEEEG00000003040 zgc:171482 (ENSEEEG00000003042) sfrp5 (ENSEEEG00000003044) GOLGA7B (ENSEEEG00000003050) CRTAC1 (ENSEEEG00000003086) LOXL4 (ENSEEEG00000003102) ENSEEEG00000003295 pyroxd2 (ENSEEEG00000003301) slc25a28 (ENSEEEG00000003354) nkx3.3 (ENSEEEG00000003355) nkx2.3 (ENSEEEG00000003356) got1 (ENSEEEG00000003358) CNNM1 (ENSEEEG00000003359) HPSE2 (ENSEEEG00000003368) Electric eel MODERN SPECIES 1 CNNM1 (ENSEEEG00000003359) got1 (ENSEEEG00000003358) nkx2.3 (ENSEEEG00000003356) nkx3.3 (ENSEEEG00000003355) slc25a28 (ENSEEEG00000003354) pyroxd2 (ENSEEEG00000003301) ENSEEEG00000003295 LOXL4 (ENSEEEG00000003102) CRTAC1 (ENSEEEG00000003086) GOLGA7B (ENSEEEG00000003050) sfrp5 (ENSEEEG00000003044) zgc:171482 (ENSEEEG00000003042) ENSEEEG00000003040 marveld1 (ENSEEEG00000003037) ENSEEEG00000003014 #22 ENSEEEG00000003008 #22 mettl18 (ENSEEEG00000003005) zdhhc16a (ENSEEEG00000003000) ENSEEEG00000002997 rrp12 (ENSEEEG00000001993) ENSEEEG00000001970 prdm8 (ENSEEEG00000001968) GDF10 (ENSEEEG00000001956) ENSEEEG00000001954 ENSEEEG00000001953 ENSEEEG00000001952 mapk8a (ENSEEEG00000001743) ARHGAP22 (ENSEEEG00000001699) LRRC18 (ENSEEEG00000001694) ENSEEEG00000001691 vstm4a (ENSEEEG00000001690) Channel catfish MODERN SPECIES 18 ENSIPUG00000008625 aftph (ENSIPUG00000008613) grpb (ENSIPUG00000008575) ENSIPUG00000008563 VPS54 (ENSIPUG00000008415) c26h19orf53 (ENSIPUG00000008390) ENSIPUG00000008372 SLC25A23 (ENSIPUG00000008144) khsrp (ENSIPUG00000008034) ENSIPUG00000008001 ENSIPUG00000007991 GOLGA7B (ENSIPUG00000007951) zfyve27 (ENSIPUG00000007823) ENSIPUG00000007798 pi4k2a (ENSIPUG00000007771) PGAM1 (ENSIPUG00000007742) #22 ENSIPUG00000007724 exosc1 (ENSIPUG00000007685) gprc5b (ENSIPUG00000007666) ENSIPUG00000007652 ENSIPUG00000007637 ENSIPUG00000007604 ENSIPUG00000007555 ENSIPUG00000007523 ENSIPUG00000007507 ENSIPUG00000007499 tekt4 (ENSIPUG00000007495) ENSIPUG00000007459 ENSIPUG00000007397 ENSIPUG00000007341 ENSIPUG00000007258 Euteleosteomorpha ANCESTRAL SPECIES 68 ENSGT00940000159703 ENSGT00550000075065.b ENSGT00940000164753.b ENSGT00940000158204.d ENSGT00390000013080 ENSGT01070000253775.b ENSGT00940000156038.a.a.d.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b Protacanthopterygii ANCESTRAL SPECIES 67 ENSGT00550000075065.b ENSGT00940000164753.b ENSGT00940000158204.d ENSGT00390000013080 ENSGT01070000253775.b ENSGT00940000156038.a.a.d.b.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.d.a ENSGT00390000013298 ENSGT00940000165757.d.n ENSGT01030000234958 ENSGT00390000010434.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b Salmoninae ANCESTRAL SPECIES 172 ENSGT00940000158204.d.c ENSGT00390000013080.k ENSGT01070000253775.b.k ENSGT01100000263495.A.a.a ENSGT00940000156038.a.a.d.b.b.b.b ENSGT00940000156038.a.a.d.b.b.b.a.a.a.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.d.a ENSGT00390000013298 ENSGT00940000165757.d.n ENSGT01030000234958 ENSGT00390000010434.b.c.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.a.a ENSGT00950000182926.b.d.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT00940000155366.b.a.b ENSGT00950000182894.B.i.a.b ENSGT00940000165523.a ENSGT00940000167012.d ENSGT00950000183139.C.i.b.a ENSGT00510000047513.h ENSGT00950000182849.B.c.a.a.c ENSGT00950000182849.B.c.a.a.d ENSGT00940000156708.a.a Salmoninae_a ANCESTRAL SPECIES 33 ENSGT00940000158204.d.c.a.b ENSGT00390000013080.k ENSGT01070000253775.b.k ENSGT01100000263495.A.a.a ENSGT00950000182774.a.a.a ENSGT00940000156038.a.a.d.b.b.b.b ENSGT00940000156038.a.a.d.b.b.b.a.a.a.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.d.a.b ENSGT00390000013298.g ENSGT01030000234958 ENSGT00390000010434.b.c.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT00940000155366.b.a.b ENSGT00950000182894.B.i.a.b ENSGT00940000165523.a ENSGT00940000167012.d ENSGT00950000183139.C.i.b.a ENSGT00510000047513.h ENSGT00950000182849.B.c.a.a.c ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Salmo ANCESTRAL SPECIES 109 ENSGT00550000075065.b.e.b.a ENSGT00940000164753.b.c ENSGT00940000158204.d.c.a.b ENSGT00390000013080.k ENSGT01070000253775.b.k ENSGT01100000263495.A.a.a.i ENSGT00950000182774.a.a.a ENSGT00940000156038.a.a.d.b.b.b.b.a ENSGT00940000156038.a.a.d.b.b.b.a.a.a.b.b ENSGT00390000013726.d.h ENSGT00390000000134.a.d.a.b ENSGT00390000013298.g ENSGT00940000165757.d.n.b ENSGT00390000010434.b.c.a ENSGT00940000166659.c ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b.f River trout DUPLICATION River trout MODERN SPECIES 5 sgsh (ENSSTUG00000004204) slc26a11 (ENSSTUG00000004351) ENSSTUG00000004566 ENSSTUG00000004577 ENSSTUG00000004592 ENSSTUG00000004606 ENSSTUG00000004624 crtac1a (ENSSTUG00000004655) golga7ba (ENSSTUG00000004758) zfyve27 (ENSSTUG00000004770) ENSSTUG00000004824 ENSSTUG00000004849 pi4k2a (ENSSTUG00000004867) ENSSTUG00000004948 cdc25d (ENSSTUG00000004957) pgam1b (ENSSTUG00000004980) #22 exosc1 (ENSSTUG00000004992) ENSSTUG00000005034 gprc5bb (ENSSTUG00000005075) ENSSTUG00000005082 tekt4 (ENSSTUG00000005119) ENSSTUG00000005158 ENSSTUG00000005165 ENSSTUG00000005183 zgc:136864 (ENSSTUG00000005186) ENSSTUG00000005198 NTHL1 (ENSSTUG00000005216) TSC2 (ENSSTUG00000005599) NTHL1 (ENSSTUG00000005755) ENSSTUG00000005774 ENSSTUG00000005788 River trout MODERN SPECIES 316 cdc25d (ENSSTUG00000043215) pgam1b (ENSSTUG00000043197) #22 exosc1 (ENSSTUG00000043065) ENSSTUG00000043055 gprc5bb (ENSSTUG00000043049) ENSSTUG00000043024 tekt4 (ENSSTUG00000042941) Atlantic salmon MODERN SPECIES 11 sgsh (ENSSSAG00000000859) slc26a11 (ENSSSAG00000000912) ENSSSAG00000000906 ENSSSAG00000113515 ENSSSAG00000107846 ENSSSAG00000118177 ENSSSAG00000008427 LOXL4 (ENSSSAG00000108329) ENSSSAG00000001117 crtac1a (ENSSSAG00000001123) golga7ba (ENSSSAG00000091893) zfyve27 (ENSSSAG00000097461) ENSSSAG00000082312 pi4k2a (ENSSSAG00000001068) cdc25d (ENSSSAG00000001080) pgam1b (ENSSSAG00000008206) #22 exosc1 (ENSSSAG00000008190) gprc5bb (ENSSSAG00000008177) si:ch211-202h22.9 (ENSSSAG00000000527) ENSSSAG00000008172 tekt4 (ENSSSAG00000000501) ENSSSAG00000001140 ENSSSAG00000120600 ENSSSAG00000120755 ENSSSAG00000001103 ENSSSAG00000004566 NTHL1 (ENSSSAG00000000591) ENSSSAG00000086587 ENSSSAG00000110868 ENSSSAG00000042177 ENSSSAG00000106981 Oncorhynchus ANCESTRAL SPECIES 68 ENSGT00940000164753.b ENSGT00940000158204.d.c.a.a ENSGT00390000013080.k.c ENSGT01070000253775.b.k.a ENSGT01100000263495.A.a.a ENSGT00950000182774.a.a.a ENSGT00940000156038.a.a.d.b.b.b.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.d.a.b ENSGT00390000013298.g ENSGT01030000234958 ENSGT00390000010434.b.c.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b.c.b ENSGT00390000015287.b.c.a ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT00940000155366.b.a.b.e ENSGT00940000165523.a ENSGT00950000183139.C.i.b.a.a ENSGT00510000047513.h ENSGT00940000162996.u.b.b.a ENSGT00950000182849.B.c.a.a.d ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987.g Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 8 sgsh (ENSOMYG00000032489) slc26a11 (ENSOMYG00000032295) ENSOMYG00000050426 ENSOMYG00000048613 ENSOMYG00000032464 ENSOMYG00000032446 ENSOMYG00000067747 LOXL4 (ENSOMYG00000063745) ENSOMYG00000051255 crtac1a (ENSOMYG00000062013) golga7ba (ENSOMYG00000031967) zfyve27 (ENSOMYG00000031885) ENSOMYG00000005333 pi4k2a (ENSOMYG00000063390) cdc25d (ENSOMYG00000061294) pgam1b (ENSOMYG00000006701) #22 exosc1 (ENSOMYG00000056293) ENSOMYG00000038480 gprc5bb (ENSOMYG00000006913) ENSOMYG00000065745 ENSOMYG00000007118 ENSOMYG00000056379 ENSOMYG00000069404 ENSOMYG00000049380 ENSOMYG00000058941 ENSOMYG00000066790 ENSOMYG00000058288 ENSOMYG00000009981 rln3b (ENSOMYG00000035854) ENSOMYG00000053627 DCAF15 (ENSOMYG00000060337) Rainbow trout MODERN SPECIES 8 gnav1 (ENSOMYG00000072200) npb (ENSOMYG00000048908) sgsh (ENSOMYG00000032392) slc26a11 (ENSOMYG00000064675) ENSOMYG00000072159 ENSOMYG00000062456 ENSOMYG00000032478 LOXL4 (ENSOMYG00000077862) ENSOMYG00000075455 crtac1a (ENSOMYG00000032014) golga7ba (ENSOMYG00000032088) zfyve27 (ENSOMYG00000051081) ENSOMYG00000073746 pi4k2a (ENSOMYG00000005311) cdc25d (ENSOMYG00000066296) pgam1b (ENSOMYG00000075613) #22 exosc1 (ENSOMYG00000075326) gprc5bb (ENSOMYG00000055411) ENSOMYG00000061575 ENSOMYG00000076634 ENSOMYG00000051297 ENSOMYG00000056856 ENSOMYG00000049822 ENSOMYG00000070917 ENSOMYG00000059257 ENSOMYG00000007016 ENSOMYG00000073032 ENSOMYG00000059644 ENSOMYG00000049820 ENSOMYG00000069738 ENSOMYG00000065935 Oncorhynchus_a ANCESTRAL SPECIES 287 ENSGT00390000013298.h ENSGT00940000165757.d.n ENSGT01030000234958 ENSGT00390000010434.b.c.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b.c.b Coho salmon DUPLICATION Coho salmon MODERN SPECIES 689 ENSOKIG00005029334 pi4k2a (ENSOKIG00005029352) cdc25d (ENSOKIG00005029452) pgam1b (ENSOKIG00005029461) #22 exosc1 (ENSOKIG00005029494) ENSOKIG00005029531 Coho salmon MODERN SPECIES 30 sgsh (ENSOKIG00005040520) slc26a11 (ENSOKIG00005040715) ENSOKIG00005040745 ENSOKIG00005040758 ENSOKIG00005040788 ENSOKIG00005040804 LOXL4 (ENSOKIG00005040861) crtac1a (ENSOKIG00005040928) golga7ba (ENSOKIG00005041158) zfyve27 (ENSOKIG00005041179) ENSOKIG00005041260 ENSOKIG00005041300 ENSOKIG00005041312 ENSOKIG00005041345 cdc25d (ENSOKIG00005041374) pgam1b (ENSOKIG00005041384) #22 exosc1 (ENSOKIG00005041419) ENSOKIG00005041513 ENSOKIG00005041529 gprc5bb (ENSOKIG00005041558) ENSOKIG00005041571 ENSOKIG00005041593 tekt4 (ENSOKIG00005041620) ENSOKIG00005041632 ENSOKIG00005041659 ENSOKIG00005041722 TSC2 (ENSOKIG00005042605) ENSOKIG00005048949 ENSOKIG00005049043 ENSOKIG00005049048 TNPO2 (ENSOKIG00005049074) Chinook salmon MODERN SPECIES 11 zgc:158803 (ENSOTSG00005000299) ENSOTSG00005000298 ENSOTSG00005000297 KCNJ4 (ENSOTSG00005000296) SOX10 (ENSOTSG00005000294) ENSOTSG00005000293 ENSOTSG00005000291 gga1 (ENSOTSG00005000275) ddx17 (ENSOTSG00005000254) ENSOTSG00005000218 get3 (ENSOTSG00005000214) smc3 (ENSOTSG00005000198) mxi1 (ENSOTSG00005000183) ENSOTSG00005000179 ENSOTSG00005000178 pgam1b (ENSOTSG00005000174) #22 exosc1 (ENSOTSG00005000168) ENSOTSG00005000164 gprc5bb (ENSOTSG00005000162) ENSOTSG00005000158 ENSOTSG00005000153 ENSOTSG00005000149 ENSOTSG00005000102 ENSOTSG00005000073 ENSOTSG00005000072 Huchen DUPLICATION Huchen MODERN SPECIES 4587 ENSHHUG00000041809 pi4k2a (ENSHHUG00000041806) ENSHHUG00000041802 pgam1b (ENSHHUG00000041788) #22 exosc1 (ENSHHUG00000041781) ENSHHUG00000041776 Huchen MODERN SPECIES 6404 pi4k2a (ENSHHUG00000025445) pgam1b (ENSHHUG00000025431) #22 cdc25d (ENSHHUG00000025399) exosc1 (ENSHHUG00000025397) ENSHHUG00000025396 ENSHHUG00000025394 si:ch211-202h22.8 (ENSHHUG00000025382) Northern pike MODERN SPECIES 8 SIRT7 (ENSELUG00000018223) pcyt2 (ENSELUG00000018189) gnav1 (ENSELUG00000018135) sgsh (ENSELUG00000000729) slc26a11 (ENSELUG00000001524) ENSELUG00000017837 LOXL4 (ENSELUG00000017718) crtac1a (ENSELUG00000017651) ENSELUG00000028633 golga7ba (ENSELUG00000033388) zfyve27 (ENSELUG00000017599) zgc:171482 (ENSELUG00000017517) ENSELUG00000000683 pi4k2a (ENSELUG00000017465) cdc25d (ENSELUG00000000659) pgam1b (ENSELUG00000017389) #22 exosc1 (ENSELUG00000017369) ENSELUG00000030465 gprc5bb (ENSELUG00000017298) ENSELUG00000024737 litaf (ENSELUG00000017282) ENSELUG00000017248 ENSELUG00000028858 ENSELUG00000028826 ENSELUG00000017204 tekt4 (ENSELUG00000017199) ENSELUG00000017164 ENSELUG00000017103 TSC2 (ENSELUG00000016788) NTHL1 (ENSELUG00000016661) ENSELUG00000016602 Acanthomorphata ANCESTRAL SPECIES 39 ENSGT00940000154394.b.a.a.b.a.b ENSGT00940000165036.b ENSGT00940000156783.k ENSGT00940000164791.a.b ENSGT01100000263541.a.a.a.b.a.b.a ENSGT01100000263541.a.a.a.a ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT00940000165757.d ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000167543 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b Cod MODERN SPECIES 16 ENSGMOG00000031412 ENSGMOG00000014521 ENSGMOG00000027671 ENSGMOG00000032150 ENSGMOG00000001172 ENSGMOG00000001182 ENSGMOG00000023697 b3gntl1 (ENSGMOG00000013255) ENSGMOG00000013267 LOXL4 (ENSGMOG00000018502) ENSGMOG00000008903 crtac1a (ENSGMOG00000008938) golga7ba (ENSGMOG00000009859) zfyve27 (ENSGMOG00000008965) pi4k2a (ENSGMOG00000008978) pgam1b (ENSGMOG00000009189) #22 exosc1 (ENSGMOG00000008993) ENSGMOG00000026064 gprc5bb (ENSGMOG00000031761) ENSGMOG00000035352 ENSGMOG00000014567 ENSGMOG00000012895 ENSGMOG00000028747 ENSGMOG00000018001 ENSGMOG00000018036 ENSGMOG00000018062 ENSGMOG00000018083 tpcn3 (ENSGMOG00000034442) pgap4 (ENSGMOG00000033614) ENSGMOG00000014247 slc8a1a (ENSGMOG00000032115) Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.a.a.a #22 Pinecone sodierfish MODERN SPECIES ENSMMDG00005015022 ENSMMDG00005015024 ENSMMDG00005015028 ENSMMDG00005015031 ENSMMDG00005015034 b3gntl1 (ENSMMDG00005015041) METRNL (ENSMMDG00005015051) ENSMMDG00005015054 ENSMMDG00005015057 LOXL4 (ENSMMDG00005015059) crtac1a (ENSMMDG00005015070) golga7ba (ENSMMDG00005015099) zfyve27 (ENSMMDG00005015119) zgc:171482 (ENSMMDG00005015125) pi4k2a (ENSMMDG00005015133) pgam1b (ENSMMDG00005015171) #22 exosc1 (ENSMMDG00005015172) ENSMMDG00005015174 gprc5bb (ENSMMDG00005015179) si:ch211-202h22.9 (ENSMMDG00005015185) tekt4 (ENSMMDG00005015265) ENSMMDG00005015270 ENSMMDG00005015280 TSC2 (ENSMMDG00005015317) NTHL1 (ENSMMDG00005016888) NHERF2 (ENSMMDG00005016890) TNPO2 (ENSMMDG00005016900) rln3b (ENSMMDG00005016933) RFX1 (ENSMMDG00005016937) DCAF15 (ENSMMDG00005017280) khsrp (ENSMMDG00005017285) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.a.a.b #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.a.a.b #22 Otomorpha ANCESTRAL SPECIES 55 ENSGT01100000263540.B.c ENSGT00390000007125.a ENSGT00940000162476 ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.d ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00940000158630.g.b ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.f.b ENSGT00940000157214.e ENSGT00940000160066 ENSGT00940000177496 ENSGT00940000161964.g.a ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b ENSGT00950000183015.B.a.b ENSGT00940000165944 Otophysi ANCESTRAL SPECIES 26 ENSGT00390000015298 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.d ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.e ENSGT00940000160066 ENSGT00940000177496 ENSGT00940000161964.g.a ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b ENSGT00940000172400 ENSGT00940000156026.e ENSGT00940000155684 ENSGT00390000008566.a Characiphysae ANCESTRAL SPECIES 13 ENSGT00390000015298 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.d ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.e ENSGT00940000160066 ENSGT00940000177496 ENSGT00940000161964.g.a ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b ENSGT00940000156026.e ENSGT00940000155684 ENSGT00390000008566.a ENSGT00730000111333.a Characiphysae_b ANCESTRAL SPECIES 10 ENSGT00390000015298 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.d ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.e ENSGT00940000160066 ENSGT00940000161964.g.a ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b ENSGT00940000156026.e ENSGT00940000155684 ENSGT00390000008566.a ENSGT00730000111333.a ENSGT00940000159008 Characoidei ANCESTRAL SPECIES 5 ENSGT00390000015298 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.d ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.e ENSGT00940000160066 ENSGT00940000161964.g.a ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b ENSGT00940000156026.e ENSGT00940000155684 ENSGT00390000008566.a ENSGT00730000111333.a ENSGT00940000159008 Red-bellied piranha MODERN SPECIES 10 CNNM1 (ENSPNAG00000030104) got1 (ENSPNAG00000000299) nkx2.3 (ENSPNAG00000005006) nkx3.3 (ENSPNAG00000005540) slc25a28 (ENSPNAG00000000304) pyroxd2 (ENSPNAG00000000311) zgc:123010 (ENSPNAG00000007579) LOXL4 (ENSPNAG00000000318) CRTAC1 (ENSPNAG00000000329) GOLGA7B (ENSPNAG00000007606) ENSPNAG00000000338 ENSPNAG00000000340 sfrp5 (ENSPNAG00000000343) zgc:171482 (ENSPNAG00000007619) marveld1 (ENSPNAG00000000351) pgam1a (ENSPNAG00000007625) #22 mettl18 (ENSPNAG00000000356) zdhhc16a (ENSPNAG00000000371) ubtd1a (ENSPNAG00000007638) rrp12 (ENSPNAG00000007658) ENSPNAG00000000395 prdm8 (ENSPNAG00000000399) GDF10 (ENSPNAG00000000403) ENSPNAG00000000412 mapk8a (ENSPNAG00000007719) ARHGAP22 (ENSPNAG00000000430) ENSPNAG00000007749 ENSPNAG00000007761 LRRC18 (ENSPNAG00000000446) ENSPNAG00000007772 vstm4a (ENSPNAG00000000450) Mexicana tetra MODERN SPECIES 17 HPSE2 (ENSAMXG00000002240) CNNM1 (ENSAMXG00000002241) got1 (ENSAMXG00000002245) nkx2.3 (ENSAMXG00000032911) nkx3.3 (ENSAMXG00000032822) slc25a28 (ENSAMXG00000035752) pyroxd2 (ENSAMXG00000002255) zgc:123010 (ENSAMXG00000041967) LOXL4 (ENSAMXG00000002265) CRTAC1 (ENSAMXG00000042122) GOLGA7B (ENSAMXG00000034309) sfrp5 (ENSAMXG00000035696) zgc:171482 (ENSAMXG00000002299) marveld1 (ENSAMXG00000002301) mettl18 (ENSAMXG00000041233) pgam1a (ENSAMXG00000032198) #22 zdhhc16a (ENSAMXG00000002308) ubtd1a (ENSAMXG00000043652) rrp12 (ENSAMXG00000012852) ENSAMXG00000012835 prdm8 (ENSAMXG00000039227) GDF10 (ENSAMXG00000012817) ENSAMXG00000034720 ENSAMXG00000040314 ENSAMXG00000041338 mapk8a (ENSAMXG00000034990) ENSAMXG00000037924 ARHGAP22 (ENSAMXG00000012708) ENSAMXG00000041442 ENSAMXG00000012614 LRRC18 (ENSAMXG00000025617) Channel catfish MODERN SPECIES 22 hpse2 (ENSIPUG00000000802) cnnm1 (ENSIPUG00000000793) got1 (ENSIPUG00000000781) Nkx2-3 (ENSIPUG00000000774) nkx3.3 (ENSIPUG00000000771) slc25a28 (ENSIPUG00000000758) pyroxd2 (ENSIPUG00000000727) ENSIPUG00000000715 LOXL4 (ENSIPUG00000000704) crtac1 (ENSIPUG00000000369) GOLGA7B (ENSIPUG00000000366) sfrp5 (ENSIPUG00000000363) zgc:171482 (ENSIPUG00000000361) ENSIPUG00000000356 marveld1 (ENSIPUG00000000351) pgam1a (ENSIPUG00000000343) #22 mettl18 (ENSIPUG00000000340) ZDHHC16 (ENSIPUG00000000333) RRP12 (ENSIPUG00000000311) ENSIPUG00000000307 znf488 (ENSIPUG00000000300) GDF10 (ENSIPUG00000000298) ENSIPUG00000000295 ENSIPUG00000000294 ENSIPUG00000000292 ENSIPUG00000000287 mapk8b (ENSIPUG00000000278) ARHGAP22 (ENSIPUG00000000272) ENSIPUG00000000266 ENSIPUG00000000260 LRRC18 (ENSIPUG00000000258) Cyprinoidei ANCESTRAL SPECIES 11 ENSGT00940000159420 ENSGT00530000063876.a ENSGT00940000156774 ENSGT00940000158220 ENSGT00940000156982 ENSGT00940000153304.B ENSGT00390000002319 ENSGT00940000154832.db.b ENSGT00940000155226 ENSGT00940000156899 ENSGT00940000158583 ENSGT00940000156568.q ENSGT00940000182267 ENSGT00940000155077.v ENSGT00940000157035 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.e ENSGT00940000160066 ENSGT00940000161964.g.a ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b ENSGT00940000165944 ENSGT00940000155684 ENSGT00940000156026.e ENSGT00390000008566.a ENSGT00730000111333.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 218 ENSGT00530000063876.a.a ENSGT00940000156774.jb.a ENSGT00940000158220.o.b ENSGT00940000156982.c ENSGT00940000153304.B.d ENSGT00390000002319.h ENSGT00940000165916.f.b ENSGT00940000156487.bb.b.a.a ENSGT00940000160091.f.a.b ENSGT00940000154832.db.b.d ENSGT00940000155226.d ENSGT00940000156899.u.a ENSGT00940000158583.m ENSGT00940000155077.v.c ENSGT00940000157035 ENSGT00950000182926.b.d.a.a.a.b.a #22 ENSGT00390000000464.l ENSGT00940000155032.k.d ENSGT00940000158630.h.d.b.b ENSGT00390000013106.j ENSGT00940000157727.x.b.a.b ENSGT00890000139463.b.b.a.b ENSGT00940000157214.e.b ENSGT00940000160066.bb.b ENSGT00940000153692.B.b.c ENSGT00950000183015.B.a.a.e.b ENSGT00940000165944 ENSGT00940000155684.td ENSGT00940000156026.e.a ENSGT00940000155684.ud ENSGT00390000008566.a.b Cyprininae_a ANCESTRAL SPECIES 150 ENSGT00530000063876.a.a ENSGT00940000156774.jb.a ENSGT00940000158220.o.b ENSGT00940000156982.c ENSGT00940000153304.B.d ENSGT00390000002319.h ENSGT00940000165916.f.b ENSGT00940000156487.bb.b.a.a ENSGT00940000160091.e ENSGT00940000154832.db.b.d ENSGT00940000155226.d ENSGT00940000156899.u.a ENSGT00940000158583.m ENSGT00940000155077.v.c ENSGT00940000157035 ENSGT00950000182926.b.d.a.a.a.b.a #22 ENSGT00390000000464.l ENSGT00940000155032.k.d ENSGT00940000158630.h.d.b.b ENSGT00390000013106.j ENSGT00940000157727.x.b.a.b ENSGT00890000139463.b.b.a.b ENSGT00940000157214.e.b ENSGT00940000160066.bb.b ENSGT00940000153692.B.b.c ENSGT00950000183015.B.a.a.e.b ENSGT00940000165944 ENSGT00940000155684.td ENSGT00940000156026.e.a ENSGT00390000008566.a.b ENSGT00730000111333.a Golden-line barbel MODERN SPECIES 105 SERTAD4 (ENSSGRG00000033736) hif1aa (ENSSGRG00000033749) prkcha (ENSSGRG00000034456) slc38a6 (ENSSGRG00000034458) trmt5 (ENSSGRG00000034461) mnat1 (ENSSGRG00000034462) six4a (ENSSGRG00000034464) six1a (ENSSGRG00000034466) six6a (ENSSGRG00000034467) ppm1aa (ENSSGRG00000034471) dhrs7 (ENSSGRG00000034496) pcnx4 (ENSSGRG00000034499) LRRC9 (ENSSGRG00000034513) RTN1 (ENSSGRG00000034522) tdrd9 (ENSSGRG00000034657) pgam1a (ENSSGRG00000034704) #22 mettl18 (ENSSGRG00000034718) zdhhc16a (ENSSGRG00000034723) ubtd1a (ENSSGRG00000034745) rrp12 (ENSSGRG00000034755) ENSSGRG00000034957 prdm8 (ENSSGRG00000034988) GDF10 (ENSSGRG00000034992) ENSSGRG00000034994 ENSSGRG00000034996 mapk8a (ENSSGRG00000035030) ARHGAP22 (ENSSGRG00000036391) ENSSGRG00000036394 LRRC18 (ENSSGRG00000036397) ENSSGRG00000036398 vstm4a (ENSSGRG00000036399) Goldfish MODERN SPECIES 31 ppifa (ENSCARG00000009732) zmiz1a (ENSCARG00000009649) prkcha (ENSCARG00000009614) slc38a6 (ENSCARG00000009574) trmt5 (ENSCARG00000009559) mnat1 (ENSCARG00000009541) six4a (ENSCARG00000009527) six1a (ENSCARG00000009517) six6a (ENSCARG00000009509) ppm1aa (ENSCARG00000009492) dhrs7 (ENSCARG00000009480) pcnx4 (ENSCARG00000009439) LRRC9 (ENSCARG00000009281) RTN1 (ENSCARG00000008928) tdrd9 (ENSCARG00000008878) pgam1a (ENSCARG00000008853) #22 mettl18 (ENSCARG00000008844) zdhhc16a (ENSCARG00000008829) ubtd1a (ENSCARG00000008817) rrp12 (ENSCARG00000006349) ENSCARG00000006080 prdm8 (ENSCARG00000069269) GDF10 (ENSCARG00000069266) ENSCARG00000069261 ENSCARG00000069249 mapk8a (ENSCARG00000068974) ARHGAP22 (ENSCARG00000068922) ENSCARG00000068915 ENSCARG00000068894 LRRC18 (ENSCARG00000068886) vstm4a (ENSCARG00000068878) Cyprininae ANCESTRAL SPECIES 176 ENSGT00530000063876.a.b ENSGT00940000156774.jb.b ENSGT00940000158220.o.a ENSGT00940000156982.d ENSGT00940000153304.B.c ENSGT00390000002319.g.a.a ENSGT00940000165916.f.a ENSGT00940000156487.bb.b.a.b ENSGT00940000160091.f.a.a ENSGT00940000154832.db.b.c ENSGT00940000155226.c ENSGT00940000156899.u.b ENSGT00940000158583.n ENSGT00940000182267 ENSGT00940000155077.v.d ENSGT00950000182926.b.d.a.a.a.b.b #22 ENSGT00390000000464.k ENSGT00940000155032.k.c ENSGT00940000158630.h.d.b.a ENSGT00390000013106.i ENSGT00940000157727.x.b.b ENSGT00890000139463.b.b.a.a ENSGT00940000157214.e.a ENSGT00940000160066.bb.a ENSGT00940000161964.g.a ENSGT00940000160066.cb ENSGT00940000155133.a.a.a ENSGT00940000153692.B.b.d ENSGT00950000183015.B.a.a.e.a ENSGT00940000172400 ENSGT00940000156026.e.b Goldfish MODERN SPECIES 4 sobpa (ENSCARG00000003793) pdss2 (ENSCARG00000003768) bend3 (ENSCARG00000003759) mtres1 (ENSCARG00000003758) prkcha (ENSCARG00000003746) slc38a6 (ENSCARG00000003730) trmt5 (ENSCARG00000003715) mnat1 (ENSCARG00000003688) six4a (ENSCARG00000003672) six1a (ENSCARG00000003663) ENSCARG00000003658 six6a (ENSCARG00000003653) ppm1aa (ENSCARG00000003645) dhrs7 (ENSCARG00000003638) ENSCARG00000003583 pgam1a (ENSCARG00000003554) #22 mettl18 (ENSCARG00000003550) zdhhc16a (ENSCARG00000003534) rrp12 (ENSCARG00000002371) ENSCARG00000002131 prdm8 (ENSCARG00000002109) GDF10 (ENSCARG00000002096) ENSCARG00000002080 ENSCARG00000002061 ENSCARG00000001963 mapk8a (ENSCARG00000019349) ARHGAP22 (ENSCARG00000019094) ENSCARG00000019071 LRRC18 (ENSCARG00000019068) WDFY4 (ENSCARG00000018997) vstm4a (ENSCARG00000018981) Cyprininae_a ANCESTRAL SPECIES 107 ENSGT00940000159420.d ENSGT00530000063876.a.b ENSGT00940000156774.jb.b ENSGT00940000158220.o.a ENSGT00940000156982.d ENSGT00940000153304.B.c ENSGT00390000002319.g.b ENSGT00940000165916.f.a ENSGT00940000160091.f.a.a ENSGT00940000154832.db.b.c ENSGT00940000155226.c ENSGT00940000156899.u.b ENSGT00940000158583.n ENSGT00940000182267 ENSGT00940000155077.v.d ENSGT00950000182926.b.d.a.a.a.b.b #22 ENSGT00390000000464.k ENSGT00940000155032.k.c ENSGT00940000158630.h.d.b.a ENSGT00390000013106.i ENSGT00940000157727.x.b.b ENSGT00890000139463.b.b.a.a ENSGT00940000157214.e.a ENSGT00940000160066.bb.a ENSGT00940000153692.B.b.d ENSGT00950000183015.B.a.a.e.a ENSGT00940000156026.e.b ENSGT00940000155684.ud ENSGT00390000008566.a.a ENSGT00940000159008.b ENSGT00940000158057.a.a Common carp reference MODERN SPECIES 18 ENSCCRG00000027246 SERTAD4 (ENSCCRG00000072297) hif1aa (ENSCCRG00000011557) prkcha (ENSCCRG00000011302) slc38a6 (ENSCCRG00000011294) trmt5 (ENSCCRG00000030686) mnat1 (ENSCCRG00000076890) six4a (ENSCCRG00000028520) six6a (ENSCCRG00000066507) ppm1aa (ENSCCRG00000051172) pcnx4 (ENSCCRG00000051192) dhrs7 (ENSCCRG00000077063) ENSCCRG00000057261 ENSCCRG00000062452 ENSCCRG00000013827 pgam1a (ENSCCRG00000066800) #22 mettl18 (ENSCCRG00000071805) zdhhc16a (ENSCCRG00000057833) rrp12 (ENSCCRG00000017718) prdm8 (ENSCCRG00000013636) ENSCCRG00000064913 ENSCCRG00000013638 ENSCCRG00000013647 mapk8a (ENSCCRG00000047265) ARHGAP22 (ENSCCRG00000047023) LRRC18 (ENSCCRG00000071889) WDFY4 (ENSCCRG00000022306) vstm4a (ENSCCRG00000022294) ENSCCRG00000065474 drgx (ENSCCRG00000078140) ERCC6 (ENSCCRG00000021478) Golden-line barbel MODERN SPECIES 350 osr1 (ENSSGRG00000044116) SYT14 (ENSSGRG00000044120) ENSSGRG00000044121 hif1aa (ENSSGRG00000044127) prkcha (ENSSGRG00000044195) slc38a6 (ENSSGRG00000044196) trmt5 (ENSSGRG00000044203) mnat1 (ENSSGRG00000044250) six4a (ENSSGRG00000044257) ppm1aa (ENSSGRG00000044258) ENSSGRG00000044259 ENSSGRG00000044263 ENSSGRG00000044264 pgam1a (ENSSGRG00000044265) #22 mettl18 (ENSSGRG00000044272) zdhhc16a (ENSSGRG00000044276) ubtd1a (ENSSGRG00000044367) ENSSGRG00000044368 prdm8 (ENSSGRG00000044369) GDF10 (ENSSGRG00000044373) ENSSGRG00000044374 ENSSGRG00000044377 ENSSGRG00000044378 mapk8a (ENSSGRG00000044392) ARHGAP22 (ENSSGRG00000045065) ENSSGRG00000045067 WDFY4 (ENSSGRG00000045068) LRRC18 (ENSSGRG00000045069) LRRC18 (ENSSGRG00000045070) Zebrafish MODERN SPECIES 4 SERTAD4 (ENSDARG00000089795) hif1aa (ENSDARG00000006181) prkcha (ENSDARG00000018382) slc38a6 (ENSDARG00000054312) trmt5 (ENSDARG00000069278) mnat1 (ENSDARG00000002077) six4a (ENSDARG00000004695) six1a (ENSDARG00000039304) six6a (ENSDARG00000025187) ppm1aa (ENSDARG00000032155) dhrs7 (ENSDARG00000003444) pcnx4 (ENSDARG00000060785) ENSDARG00000054352 rtn1a (ENSDARG00000006497) tdrd9 (ENSDARG00000013453) pgam1a (ENSDARG00000005423) #22 mettl18 (ENSDARG00000074588) zdhhc16a (ENSDARG00000007808) ubtd1a (ENSDARG00000007382) rrp12 (ENSDARG00000022410) ENSDARG00000060845 prdm8 (ENSDARG00000025017) GDF10 (ENSDARG00000095378) ENSDARG00000075459 ENSDARG00000106245 mapk8a (ENSDARG00000031888) ENSDARG00000112690 ARHGAP22 (ENSDARG00000021255) ENSDARG00000075225 LRRC18 (ENSDARG00000078790) ENSDARG00000077009 Clupeiformes ANCESTRAL SPECIES 146 ENSGT00940000162476 ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.e ENSGT00940000160608 ENSGT00940000165757.c.b.b ENSGT00510000049375 ENSGT00390000010434.b.p ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00950000182926.b.d.a.a.a.b #22 ENSGT00390000000464 ENSGT00940000155032.k ENSGT00940000158630.g.b ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a ENSGT00940000157214.f.b ENSGT00940000160066 ENSGT00940000153692.B.b ENSGT00950000183015.B.a.b ENSGT00940000165944 ENSGT00940000155684 ENSGT00390000008566.a ENSGT00730000111333.a ENSGT00940000159008 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 11 got1 (ENSDCDG00000017514) ENSDCDG00000017511 nkx3.3 (ENSDCDG00000017510) slc25a28 (ENSDCDG00000017509) ENSDCDG00000017503 ENSDCDG00000017497 pyroxd2 (ENSDCDG00000017052) zgc:123010 (ENSDCDG00000017041) LOXL4 (ENSDCDG00000016723) CRTAC1 (ENSDCDG00000016710) GOLGA7B (ENSDCDG00000016703) sfrp5 (ENSDCDG00000016702) zgc:171482 (ENSDCDG00000016698) ENSDCDG00000016695 marveld1 (ENSDCDG00000016694) pgam1a (ENSDCDG00000016692) #22 mettl18 (ENSDCDG00000016688) zdhhc16a (ENSDCDG00000016684) ubtd1a (ENSDCDG00000016682) rrp12 (ENSDCDG00000016653) ENSDCDG00000016641 ENSDCDG00000016640 ENSDCDG00000016631 paox (ENSDCDG00000016628) chst3b (ENSDCDG00000016625) pax2b (ENSDCDG00000016621) fbxl15 (ENSDCDG00000016614) gpx9 (ENSDCDG00000016607) ndufb8 (ENSDCDG00000016604) SEC31B (ENSDCDG00000016304) scd (ENSDCDG00000016293) Denticle herring MODERN SPECIES 299 marveld1 (ENSDCDG00000029311) pgam1a (ENSDCDG00000029309) #22 mettl18 (ENSDCDG00000029307) zdhhc16a (ENSDCDG00000029262) ubtd1a (ENSDCDG00000029259) rrp12 (ENSDCDG00000029095) ccn5 (ENSDCDG00000029077) pfkfb1 (ENSDCDG00000022822) ITIH6 (ENSDCDG00000022708) GDI1 (ENSDCDG00000022604) atp6ap1b (ENSDCDG00000022599) chrna4b (ENSDCDG00000022388) GFUS (ENSDCDG00000022009) PFKFB2 (ENSDCDG00000016715) ENSDCDG00000016666 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.a.b #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.a.b #22 Euteleosteomorpha ANCESTRAL SPECIES 68 ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00510000049375 ENSGT00730000112219 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a Acanthomorphata ANCESTRAL SPECIES 24 ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000157609 ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k Fugu MODERN SPECIES 16 hps1 (ENSTRUG00000008073) HPSE2 (ENSTRUG00000007806) cnnm1 (ENSTRUG00000007603) got1 (ENSTRUG00000007276) nkx2.3 (ENSTRUG00000024381) nkx3.3 (ENSTRUG00000020172) slc25a28 (ENSTRUG00000007096) pyroxd2 (ENSTRUG00000006805) LOXL4 (ENSTRUG00000006359) crtac1 (ENSTRUG00000006008) sfrp5 (ENSTRUG00000021491) zgc:171482 (ENSTRUG00000005705) ENSTRUG00000032921 ENSTRUG00000022628 marveld1 (ENSTRUG00000005698) pgam1a (ENSTRUG00000022599) #22 ENSTRUG00000005455 ENSTRUG00000004311 zfand4 (ENSTRUG00000004042) marchf8 (ENSTRUG00000025265) alox5a (ENSTRUG00000002647) slc25a16 (ENSTRUG00000013655) ENSTRUG00000021262 eif4e1c (ENSTRUG00000029039) si:dkey-228d14.5 (ENSTRUG00000013556) echs1 (ENSTRUG00000013493) zgc:110319 (ENSTRUG00000013457) ccar1 (ENSTRUG00000013280) stox1 (ENSTRUG00000021677) si:ch211-198a12.6 (ENSTRUG00000023373) ENSTRUG00000031477 Tetraodon MODERN SPECIES 9 HPSE2 (ENSTNIG00000002756) CNNM1 (ENSTNIG00000002757) got1 (ENSTNIG00000002758) got1 (ENSTNIG00000005827) nkx2.3 (ENSTNIG00000005826) slc25a28 (ENSTNIG00000008686) pyroxd2 (ENSTNIG00000008685) zgc:123010 (ENSTNIG00000001303) LOXL4 (ENSTNIG00000008684) CRTAC1 (ENSTNIG00000008683) golga7ba (ENSTNIG00000008682) sfrp5 (ENSTNIG00000008681) ENSTNIG00000008680 zgc:171482 (ENSTNIG00000008679) marveld1 (ENSTNIG00000000905) pgam1a (ENSTNIG00000008678) #22 ENSTNIG00000008677 ENSTNIG00000008676 zfand4 (ENSTNIG00000008675) marchf8 (ENSTNIG00000008674) alox5a (ENSTNIG00000008673) slc25a16 (ENSTNIG00000008672) ENSTNIG00000008671 eif4e1c (ENSTNIG00000008670) ENSTNIG00000008669 echs1 (ENSTNIG00000008668) zgc:110319 (ENSTNIG00000000607) ccar1 (ENSTNIG00000008667) si:ch211-198a12.6 (ENSTNIG00000008666) ENSTNIG00000008665 zgc:154058 (ENSTNIG00000002088) Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Ballan wrasse MODERN SPECIES 298 ENSLBEG00000006357 marveld1 (ENSLBEG00000006382) pgam1a (ENSLBEG00000006415) #22 ENSLBEG00000006502 zfand4 (ENSLBEG00000006651) marchf8 (ENSLBEG00000006681) alox5a (ENSLBEG00000006762) slc25a16 (ENSLBEG00000006861) ENSLBEG00000006929 eif4e1c (ENSLBEG00000007011) si:dkey-228d14.5 (ENSLBEG00000007056) zgc:110319 (ENSLBEG00000007112) ccar1 (ENSLBEG00000007156) stox1 (ENSLBEG00000007252) si:ch211-198a12.6 (ENSLBEG00000007315) zgc:154058 (ENSLBEG00000007325) mat1a (ENSLBEG00000007342) ENSLBEG00000007388 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Large yellow croaker MODERN SPECIES 2 CNNM1 (ENSLCRG00005010328) got1 (ENSLCRG00005010334) nkx2.3 (ENSLCRG00005010397) nkx3.3 (ENSLCRG00005010398) slc25a28 (ENSLCRG00005010400) pyroxd2 (ENSLCRG00005010402) zgc:123010 (ENSLCRG00005010405) LOXL4 (ENSLCRG00005010408) CRTAC1 (ENSLCRG00005010413) golga7ba (ENSLCRG00005010435) sfrp5 (ENSLCRG00005010438) zgc:171482 (ENSLCRG00005010440) ENSLCRG00005010441 ENSLCRG00005010442 marveld1 (ENSLCRG00005010443) pgam1a (ENSLCRG00005010445) #22 ENSLCRG00005010450 ENSLCRG00005010452 zfand4 (ENSLCRG00005010454) marchf8 (ENSLCRG00005010457) alox5a (ENSLCRG00005010486) slc25a16 (ENSLCRG00005010538) ENSLCRG00005010540 eif4e1c (ENSLCRG00005010542) si:dkey-228d14.5 (ENSLCRG00005010597) zgc:110319 (ENSLCRG00005010598) ccar1 (ENSLCRG00005010601) stox1 (ENSLCRG00005010706) si:ch211-198a12.6 (ENSLCRG00005010707) zgc:154058 (ENSLCRG00005010709) mat1a (ENSLCRG00005010716) Gilthead seabream MODERN SPECIES 6 got1 (ENSSAUG00010013416) nkx2.3 (ENSSAUG00010013411) nkx3.3 (ENSSAUG00010013410) slc25a28 (ENSSAUG00010013405) pyroxd2 (ENSSAUG00010013150) zgc:123010 (ENSSAUG00010013149) LOXL4 (ENSSAUG00010013108) CRTAC1 (ENSSAUG00010013019) golga7ba (ENSSAUG00010013014) sfrp5 (ENSSAUG00010013011) zgc:171482 (ENSSAUG00010026024) ENSSAUG00010026023 ENSSAUG00010026022 ENSSAUG00010026021 marveld1 (ENSSAUG00010026020) pgam1a (ENSSAUG00010026018) #22 ENSSAUG00010026015 zfand4 (ENSSAUG00010026008) marchf8 (ENSSAUG00010026006) alox5a (ENSSAUG00010026005) slc25a16 (ENSSAUG00010026002) TET1 (ENSSAUG00010026001) eif4e1c (ENSSAUG00010025999) si:dkey-228d14.5 (ENSSAUG00010025997) zgc:110319 (ENSSAUG00010025996) ccar1 (ENSSAUG00010025837) stox1 (ENSSAUG00010025831) si:ch211-198a12.6 (ENSSAUG00010025829) ENSSAUG00010025828 zgc:154058 (ENSSAUG00010025827) mat1a (ENSSAUG00010025808) Perciformes ANCESTRAL SPECIES 17 ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00970000193827 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01030000234578.A.b.a.a.a.a.b ENSGT00950000183185.c.a.b.a.a Cottioidei ANCESTRAL SPECIES 17 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b ENSGT00950000183185.c.a.b.a.a Lumpfish MODERN SPECIES 6 HPSE2 (ENSCLMG00005013376) CNNM1 (ENSCLMG00005013377) got1 (ENSCLMG00005013379) ENSCLMG00005013381 nkx3.3 (ENSCLMG00005013382) slc25a28 (ENSCLMG00005013383) pyroxd2 (ENSCLMG00005013386) zgc:123010 (ENSCLMG00005013407) LOXL4 (ENSCLMG00005013408) CRTAC1 (ENSCLMG00005013409) GOLGA7B (ENSCLMG00005013410) sfrp5 (ENSCLMG00005013426) zgc:171482 (ENSCLMG00005013427) ENSCLMG00005013428 marveld1 (ENSCLMG00005013429) ENSCLMG00005013430 #22 ENSCLMG00005013431 ENSCLMG00005013432 zfand4 (ENSCLMG00005013434) marchf8 (ENSCLMG00005013435) alox5a (ENSCLMG00005013436) alox5a (ENSCLMG00005013438) slc25a16 (ENSCLMG00005013439) ENSCLMG00005013440 eif4e1c (ENSCLMG00005013442) si:dkey-228d14.5 (ENSCLMG00005013443) zgc:110319 (ENSCLMG00005013444) ccar1 (ENSCLMG00005013456) ENSCLMG00005013484 ENSCLMG00005013487 zgc:154058 (ENSCLMG00005013493) Stickleback MODERN SPECIES 6 HPSE2 (ENSGACG00000007523) CNNM1 (ENSGACG00000007529) got1 (ENSGACG00000007534) nkx2.3 (ENSGACG00000007568) nkx3.3 (ENSGACG00000007573) slc25a28 (ENSGACG00000007574) pyroxd2 (ENSGACG00000007586) zgc:123010 (ENSGACG00000007620) LOXL4 (ENSGACG00000007635) CRTAC1 (ENSGACG00000007647) golga7ba (ENSGACG00000007656) sfrp5 (ENSGACG00000007665) zgc:171482 (ENSGACG00000007680) ENSGACG00000007685 marveld1 (ENSGACG00000007690) pgam1a (ENSGACG00000007692) #22 ENSGACG00000007703 ENSGACG00000007709 zfand4 (ENSGACG00000007740) marchf8 (ENSGACG00000007749) alox5a (ENSGACG00000007762) slc25a16 (ENSGACG00000007784) ENSGACG00000007793 eif4e1c (ENSGACG00000007799) si:dkey-228d14.5 (ENSGACG00000007851) zgc:110319 (ENSGACG00000007857) ccar1 (ENSGACG00000007905) stox1 (ENSGACG00000007917) ENSGACG00000007922 ENSGACG00000007924 ENSGACG00000007928 Perciformes_a ANCESTRAL SPECIES 16 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00970000193827 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01030000234578.A.b.a.a.a.a.b ENSGT00950000183185.c.a.b.a.a Channel bull blenny MODERN SPECIES 6 HPSE2 (ENSCGOG00000014794) CNNM1 (ENSCGOG00000014819) got1 (ENSCGOG00000014821) nkx2.3 (ENSCGOG00000014865) nkx3.3 (ENSCGOG00000014866) slc25a28 (ENSCGOG00000014869) pyroxd2 (ENSCGOG00000014876) zgc:123010 (ENSCGOG00000015095) LOXL4 (ENSCGOG00000015110) CRTAC1 (ENSCGOG00000015313) golga7ba (ENSCGOG00000015325) sfrp5 (ENSCGOG00000015328) zgc:171482 (ENSCGOG00000015332) ENSCGOG00000015336 marveld1 (ENSCGOG00000015344) pgam1a (ENSCGOG00000015347) #22 ENSCGOG00000015371 ENSCGOG00000015373 zfand4 (ENSCGOG00000015392) marchf8 (ENSCGOG00000015399) alox5a (ENSCGOG00000015424) slc25a16 (ENSCGOG00000015970) ENSCGOG00000015976 eif4e1c (ENSCGOG00000015979) si:dkey-228d14.5 (ENSCGOG00000015994) zgc:110319 (ENSCGOG00000015996) ccar1 (ENSCGOG00000015998) stox1 (ENSCGOG00000016100) si:ch211-198a12.6 (ENSCGOG00000016101) zgc:154058 (ENSCGOG00000016103) mat1a (ENSCGOG00000016114) Pike perch MODERN SPECIES 10 HPSE2 (ENSSLUG00000021232) CNNM1 (ENSSLUG00000021240) got1 (ENSSLUG00000021245) nkx2.3 (ENSSLUG00000021254) nkx3.3 (ENSSLUG00000021257) slc25a28 (ENSSLUG00000021260) pyroxd2 (ENSSLUG00000021277) zgc:123010 (ENSSLUG00000021394) LOXL4 (ENSSLUG00000021403) CRTAC1 (ENSSLUG00000021425) golga7ba (ENSSLUG00000021452) sfrp5 (ENSSLUG00000021464) zgc:171482 (ENSSLUG00000021467) ENSSLUG00000021470 marveld1 (ENSSLUG00000021471) ENSSLUG00000021474 #22 ENSSLUG00000021479 ENSSLUG00000021496 zfand4 (ENSSLUG00000021516) marchf8 (ENSSLUG00000021524) alox5a (ENSSLUG00000021542) slc25a16 (ENSSLUG00000021594) ENSSLUG00000021603 eif4e1c (ENSSLUG00000021618) ENSSLUG00000021640 zgc:110319 (ENSSLUG00000021644) ccar1 (ENSSLUG00000021681) stox1 (ENSSLUG00000021880) si:ch211-198a12.6 (ENSSLUG00000021882) zgc:154058 (ENSSLUG00000021889) mat1a (ENSSLUG00000021923) Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Carangaria ANCESTRAL SPECIES 19 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Carangaria_A ANCESTRAL SPECIES 25 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Seriola ANCESTRAL SPECIES 17 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Greater amberjack MODERN SPECIES 147 CNNM1 (ENSSDUG00000008497) got1 (ENSSDUG00000008579) nkx2.3 (ENSSDUG00000008599) nkx3.3 (ENSSDUG00000008602) slc25a28 (ENSSDUG00000008608) pyroxd2 (ENSSDUG00000008623) zgc:123010 (ENSSDUG00000008651) ENSSDUG00000008672 ENSSDUG00000008685 CRTAC1 (ENSSDUG00000008706) golga7ba (ENSSDUG00000008742) sfrp5 (ENSSDUG00000008758) zgc:171482 (ENSSDUG00000008773) ENSSDUG00000008786 marveld1 (ENSSDUG00000008794) pgam1a (ENSSDUG00000008810) #22 ENSSDUG00000008825 ENSSDUG00000008867 zfand4 (ENSSDUG00000008956) marchf8 (ENSSDUG00000008987) alox5a (ENSSDUG00000009042) slc25a16 (ENSSDUG00000009069) ENSSDUG00000009091 eif4e1c (ENSSDUG00000009117) si:dkey-228d14.5 (ENSSDUG00000009142) zgc:110319 (ENSSDUG00000009175) ccar1 (ENSSDUG00000009187) stox1 (ENSSDUG00000009229) si:ch211-198a12.6 (ENSSDUG00000009234) ENSSDUG00000009240 zgc:154058 (ENSSDUG00000009257) Yellowtail amberjack MODERN SPECIES 2713 CNNM1 (ENSSLDG00000019278) got1 (ENSSLDG00000019291) nkx2.3 (ENSSLDG00000019312) nkx3.3 (ENSSLDG00000019317) slc25a28 (ENSSLDG00000019324) pyroxd2 (ENSSLDG00000019341) zgc:123010 (ENSSLDG00000019386) ENSSLDG00000019427 ENSSLDG00000019436 CRTAC1 (ENSSLDG00000019460) golga7ba (ENSSLDG00000019486) sfrp5 (ENSSLDG00000019498) zgc:171482 (ENSSLDG00000019510) ENSSLDG00000019520 marveld1 (ENSSLDG00000019528) pgam1a (ENSSLDG00000019539) #22 ENSSLDG00000019544 ENSSLDG00000019605 zfand4 (ENSSLDG00000019719) marchf8 (ENSSLDG00000019743) alox5a (ENSSLDG00000019789) slc25a16 (ENSSLDG00000019821) ENSSLDG00000019848 eif4e1c (ENSSLDG00000019869) si:dkey-228d14.5 (ENSSLDG00000019893) zgc:110319 (ENSSLDG00000019918) ccar1 (ENSSLDG00000019960) stox1 (ENSSLDG00000020019) si:ch211-198a12.6 (ENSSLDG00000020028) zgc:154058 (ENSSLDG00000020033) mat1a (ENSSLDG00000020047) Barramundi perch MODERN SPECIES 14 HPSE2 (ENSLCAG00010004113) CNNM1 (ENSLCAG00010004120) got1 (ENSLCAG00010004125) nkx2.3 (ENSLCAG00010004130) nkx3.3 (ENSLCAG00010004133) slc25a28 (ENSLCAG00010004135) pyroxd2 (ENSLCAG00010004145) zgc:123010 (ENSLCAG00010004184) LOXL4 (ENSLCAG00010004189) CRTAC1 (ENSLCAG00010004209) golga7ba (ENSLCAG00010004221) sfrp5 (ENSLCAG00010004224) zgc:171482 (ENSLCAG00010004228) ENSLCAG00010004232 marveld1 (ENSLCAG00010004234) pgam1a (ENSLCAG00010004235) #22 ENSLCAG00010004237 ENSLCAG00010004244 zfand4 (ENSLCAG00010004251) marchf8 (ENSLCAG00010004255) alox5a (ENSLCAG00010004266) slc25a16 (ENSLCAG00010004272) ENSLCAG00010004273 ENSLCAG00010004276 eif4e1c (ENSLCAG00010004283) si:dkey-228d14.5 (ENSLCAG00010004313) zgc:110319 (ENSLCAG00010004319) ccar1 (ENSLCAG00010004327) stox1 (ENSLCAG00010004355) si:ch211-198a12.6 (ENSLCAG00010004360) ENSLCAG00010004363 Pleuronectoidei ANCESTRAL SPECIES 25 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Turbot MODERN SPECIES 6 ENSSMAG00000003068 got1 (ENSSMAG00000003052) nkx2.3 (ENSSMAG00000003048) nkx3.3 (ENSSMAG00000027149) slc25a28 (ENSSMAG00000003030) pyroxd2 (ENSSMAG00000002980) zgc:123010 (ENSSMAG00000002904) LOXL4 (ENSSMAG00000002844) CRTAC1 (ENSSMAG00000002780) GOLGA7B (ENSSMAG00000030452) sfrp5 (ENSSMAG00000002734) zgc:171482 (ENSSMAG00000002715) ENSSMAG00000002708 ENSSMAG00000002697 ENSSMAG00000002692 ENSSMAG00000024696 #22 ENSSMAG00000002635 ENSSMAG00000002473 ZFAND4 (ENSSMAG00000002454) marchf8 (ENSSMAG00000002381) alox5a (ENSSMAG00000002325) slc25a16 (ENSSMAG00000002289) ENSSMAG00000002287 ENSSMAG00000002276 eif4e1c (ENSSMAG00000002255) si:dkey-228d14.5 (ENSSMAG00000002228) zgc:110319 (ENSSMAG00000002222) ccar1 (ENSSMAG00000002119) stox1 (ENSSMAG00000002098) ENSSMAG00000002089 ENSSMAG00000002081 Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00970000193827 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Zig-zag eel MODERN SPECIES 6 HPSE2 (ENSMAMG00000001454) CNNM1 (ENSMAMG00000001389) got1 (ENSMAMG00000001359) nkx2.3 (ENSMAMG00000001312) nkx3.3 (ENSMAMG00000001296) slc25a28 (ENSMAMG00000001280) pyroxd2 (ENSMAMG00000001200) zgc:123010 (ENSMAMG00000001145) LOXL4 (ENSMAMG00000001127) CRTAC1 (ENSMAMG00000001076) GOLGA7B (ENSMAMG00000024613) sfrp5 (ENSMAMG00000001048) zgc:171482 (ENSMAMG00000001031) ENSMAMG00000001014 ENSMAMG00000000923 ENSMAMG00000000913 #22 ENSMAMG00000000839 ENSMAMG00000000703 ZFAND4 (ENSMAMG00000000662) marchf8 (ENSMAMG00000000649) alox5a (ENSMAMG00000000596) slc25a16 (ENSMAMG00000000546) TET1 (ENSMAMG00000000506) eif4e1c (ENSMAMG00000000450) si:dkey-228d14.5 (ENSMAMG00000027672) zgc:110319 (ENSMAMG00000000383) ccar1 (ENSMAMG00000000309) stox1 (ENSMAMG00000000303) ENSMAMG00000021854 ENSMAMG00000021852 ENSMAMG00000021849 Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000177979 ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00970000193827 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b ENSGT01030000234578.A.b.a.a.a.a.b Siamese fighting fish MODERN SPECIES 6 pyroxd2 (ENSBSLG00000021593) zgc:123010 (ENSBSLG00000021603) ENSBSLG00000021637 nkx2.3 (ENSBSLG00000021639) nkx3.3 (ENSBSLG00000021640) slc25a28 (ENSBSLG00000021642) pyroxd2 (ENSBSLG00000021658) LOXL4 (ENSBSLG00000021670) CRTAC1 (ENSBSLG00000021687) golga7ba (ENSBSLG00000022031) sfrp5 (ENSBSLG00000022037) zgc:171482 (ENSBSLG00000022050) ENSBSLG00000022054 ENSBSLG00000022068 marveld1 (ENSBSLG00000022078) pgam1a (ENSBSLG00000022085) #22 ENSBSLG00000022097 ENSBSLG00000022115 zfand4 (ENSBSLG00000022171) marchf8 (ENSBSLG00000022176) alox5a (ENSBSLG00000022193) slc25a16 (ENSBSLG00000022220) TET1 (ENSBSLG00000022230) eif4e1c (ENSBSLG00000022234) si:dkey-228d14.5 (ENSBSLG00000022245) zgc:110319 (ENSBSLG00000022252) ccar1 (ENSBSLG00000022275) stox1 (ENSBSLG00000022576) si:ch211-198a12.6 (ENSBSLG00000022579) ENSBSLG00000022580 zgc:154058 (ENSBSLG00000022587) Climbing perch MODERN SPECIES 6 CNNM1 (ENSATEG00000000944) got1 (ENSATEG00000001085) nkx2.3 (ENSATEG00000001133) nkx3.3 (ENSATEG00000028419) slc25a28 (ENSATEG00000001143) pyroxd2 (ENSATEG00000001168) zgc:123010 (ENSATEG00000001220) LOXL4 (ENSATEG00000001230) CRTAC1 (ENSATEG00000001284) GOLGA7B (ENSATEG00000027423) sfrp5 (ENSATEG00000001362) ENSATEG00000025382 zgc:171482 (ENSATEG00000001371) ENSATEG00000001393 ENSATEG00000001419 ENSATEG00000001446 #22 ENSATEG00000001472 ENSATEG00000001486 ZFAND4 (ENSATEG00000001509) marchf8 (ENSATEG00000001524) alox5a (ENSATEG00000001548) slc25a16 (ENSATEG00000027178) ENSATEG00000001663 eif4e1c (ENSATEG00000026885) si:dkey-228d14.5 (ENSATEG00000025545) zgc:110319 (ENSATEG00000001685) ccar1 (ENSATEG00000001698) stox1 (ENSATEG00000001830) ENSATEG00000001833 ENSATEG00000001843 zgc:154058 (ENSATEG00000001851) Ovalentaria ANCESTRAL SPECIES 18 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Oryzias ANCESTRAL SPECIES 6 ENSGT01100000265163 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00970000193827 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Oryzias_b ANCESTRAL SPECIES 7 ENSGT00940000157525.b ENSGT01100000265163 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00970000193827 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Indian medaka MODERN SPECIES 27 HPSE2 (ENSOMEG00000003198) CNNM1 (ENSOMEG00000003230) got1 (ENSOMEG00000003293) nkx2.3 (ENSOMEG00000003316) nkx3.3 (ENSOMEG00000003321) slc25a28 (ENSOMEG00000003332) pyroxd2 (ENSOMEG00000003379) zgc:123010 (ENSOMEG00000003408) LOXL4 (ENSOMEG00000003421) CRTAC1 (ENSOMEG00000003461) golga7ba (ENSOMEG00000003486) sfrp5 (ENSOMEG00000003509) zgc:171482 (ENSOMEG00000003526) ENSOMEG00000003536 marveld1 (ENSOMEG00000003543) pgam1a (ENSOMEG00000003552) #22 ENSOMEG00000003591 ENSOMEG00000003742 zfand4 (ENSOMEG00000003785) marchf8 (ENSOMEG00000003833) alox5a (ENSOMEG00000003860) slc25a16 (ENSOMEG00000003877) TET1 (ENSOMEG00000003894) eif4e1c (ENSOMEG00000003911) si:dkey-228d14.5 (ENSOMEG00000003916) zgc:110319 (ENSOMEG00000003938) ccar1 (ENSOMEG00000003998) stox1 (ENSOMEG00000004013) si:ch211-198a12.6 (ENSOMEG00000004023) ENSOMEG00000004030 zgc:154058 (ENSOMEG00000004041) Javanese ricefish MODERN SPECIES 6 CNNM1 (ENSOJAG00000013995) ENSOJAG00000013960 got1 (ENSOJAG00000013930) nkx2.3 (ENSOJAG00000013921) nkx3.3 (ENSOJAG00000013915) slc25a28 (ENSOJAG00000013902) pyroxd2 (ENSOJAG00000013451) zgc:123010 (ENSOJAG00000013423) LOXL4 (ENSOJAG00000013309) CRTAC1 (ENSOJAG00000013109) golga7ba (ENSOJAG00000013072) sfrp5 (ENSOJAG00000013058) zgc:171482 (ENSOJAG00000013050) ENSOJAG00000013022 marveld1 (ENSOJAG00000013004) pgam1a (ENSOJAG00000012978) #22 ENSOJAG00000012965 ENSOJAG00000012919 zfand4 (ENSOJAG00000012892) marchf8 (ENSOJAG00000012830) ENSOJAG00000012795 alox5a (ENSOJAG00000012713) slc25a16 (ENSOJAG00000012616) TET1 (ENSOJAG00000012552) eif4e1c (ENSOJAG00000012509) si:dkey-228d14.5 (ENSOJAG00000012495) zgc:110319 (ENSOJAG00000012476) ccar1 (ENSOJAG00000011851) stox1 (ENSOJAG00000011811) si:ch211-198a12.6 (ENSOJAG00000011802) ENSOJAG00000011794 Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000157525.b ENSGT01100000265163 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01030000234578.A.b.a.a.a.a.b ENSGT00950000183185.c.a.b.a.a Chinese medaka MODERN SPECIES 557 ENSOSIG00000007278 got1 (ENSOSIG00000007277) nkx2.3 (ENSOSIG00000007275) nkx3.3 (ENSOSIG00000007274) slc25a28 (ENSOSIG00000007272) pyroxd2 (ENSOSIG00000007194) zgc:123010 (ENSOSIG00000007189) LOXL4 (ENSOSIG00000006771) CRTAC1 (ENSOSIG00000005087) golga7ba (ENSOSIG00000005065) sfrp5 (ENSOSIG00000005063) zgc:171482 (ENSOSIG00000005061) ENSOSIG00000005060 ENSOSIG00000005059 marveld1 (ENSOSIG00000005057) pgam1a (ENSOSIG00000005056) #22 ENSOSIG00000005055 ENSOSIG00000005053 zfand4 (ENSOSIG00000005048) marchf8 (ENSOSIG00000005042) alox5a (ENSOSIG00000003843) slc25a16 (ENSOSIG00000003791) ENSOSIG00000003776 eif4e1c (ENSOSIG00000003757) si:dkey-228d14.5 (ENSOSIG00000023351) ccar1 (ENSOSIG00000023348) stox1 (ENSOSIG00000023341) ENSOSIG00000023333 zgc:154058 (ENSOSIG00000023328) mat1a (ENSOSIG00000023325) selenou1a (ENSOSIG00000023320) Japanese Medaka HdrR MODERN SPECIES 6 ENSORLG00000021808 got1 (ENSORLG00000007741) nkx2.3 (ENSORLG00000007722) nkx3.3 (ENSORLG00000007716) slc25a28 (ENSORLG00000007710) pyroxd2 (ENSORLG00000007699) zgc:123010 (ENSORLG00000007675) ENSORLG00000007662 ENSORLG00000025258 CRTAC1 (ENSORLG00000007646) GOLGA7B (ENSORLG00000023120) sfrp5 (ENSORLG00000007621) zgc:171482 (ENSORLG00000007607) ENSORLG00000007598 marveld1 (ENSORLG00000027726) pgam1a (ENSORLG00000007592) #22 ENSORLG00000026750 ENSORLG00000007565 zfand4 (ENSORLG00000007496) marchf8 (ENSORLG00000007479) alox5a (ENSORLG00000007461) slc25a16 (ENSORLG00000026181) TET1 (ENSORLG00000026069) eif4e1c (ENSORLG00000019400) si:dkey-228d14.5 (ENSORLG00000019392) zgc:110319 (ENSORLG00000029904) ccar1 (ENSORLG00000007436) stox1 (ENSORLG00000026324) si:ch211-198a12.6 (ENSORLG00000007397) zgc:154058 (ENSORLG00000007393) mat1a (ENSORLG00000007386) Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Aplocheiloidei ANCESTRAL SPECIES 43 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT00940000154395.a.a.a.b.b ENSGT01030000234578.A.b.a.a.a.a.b Mangrove rivulus MODERN SPECIES 3 zgc:171482 (ENSKMAG00000005077) ENSKMAG00000005062 marveld1 (ENSKMAG00000005056) pgam1a (ENSKMAG00000005032) #22 ENSKMAG00000005005 ENSKMAG00000004942 zfand4 (ENSKMAG00000004916) marchf8 (ENSKMAG00000004883) alox5a (ENSKMAG00000004642) slc25a16 (ENSKMAG00000004595) TET1 (ENSKMAG00000004567) eif4e1c (ENSKMAG00000004557) si:dkey-228d14.5 (ENSKMAG00000004541) zgc:110319 (ENSKMAG00000004521) ccar1 (ENSKMAG00000004397) stox1 (ENSKMAG00000004372) si:ch211-198a12.6 (ENSKMAG00000004363) ENSKMAG00000004349 zgc:154058 (ENSKMAG00000004343) Turquoise killifish MODERN SPECIES 1612 got1 (ENSNFUG00015018375) nkx2.3 (ENSNFUG00015018403) nkx3.3 (ENSNFUG00015018405) SLC25A28 (ENSNFUG00015018407) pyroxd2 (ENSNFUG00015018415) TTC31 (ENSNFUG00015018453) LOXL4 (ENSNFUG00015018470) ENSNFUG00015018502 CRTAC1 (ENSNFUG00015018504) GOLGA7BB (ENSNFUG00015018520) SFRP5 (ENSNFUG00015018523) zgc:171482 (ENSNFUG00015018528) ENSNFUG00015018529 ENSNFUG00015018533 MARVELD1 (ENSNFUG00015018535) PGAM1B (ENSNFUG00015018538) #22 FAM178A (ENSNFUG00015018546) ENSNFUG00015018559 ZFAND4 (ENSNFUG00015018581) MARCH8 (ENSNFUG00015018583) alox5a (ENSNFUG00015018618) ENSNFUG00015002938 SLC25A16 (ENSNFUG00015002944) ENSNFUG00015002954 eif4e1c (ENSNFUG00015002958) ENSNFUG00015002961 Nfu_g_1_014361 (ENSNFUG00015002966) ccar1 (ENSNFUG00015002979) ENSNFUG00015003002 si:ch211-198a12.6 (ENSNFUG00015003006) STOX1 (ENSNFUG00015003009) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000170691 ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k Poeciliinae ANCESTRAL SPECIES 16 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000170691 ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k Poecilia ANCESTRAL SPECIES 11 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000170691 ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935.d ENSGT00940000158935.c ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C Guppy DUPLICATION Guppy MODERN SPECIES 445 CNNM1 (ENSPREG00000019717) got1 (ENSPREG00000019685) nkx2.3 (ENSPREG00000019670) nkx3.3 (ENSPREG00000019662) slc25a28 (ENSPREG00000019641) pyroxd2 (ENSPREG00000019619) zgc:123010 (ENSPREG00000019587) ENSPREG00000019578 ENSPREG00000019565 CRTAC1 (ENSPREG00000019532) golga7ba (ENSPREG00000019525) sfrp5 (ENSPREG00000019287) zgc:171482 (ENSPREG00000019241) ENSPREG00000019229 marveld1 (ENSPREG00000019221) ENSPREG00000019215 #22 ENSPREG00000019207 #22 ENSPREG00000019193 zfand4 (ENSPREG00000019165) marchf8 (ENSPREG00000019096) alox5a (ENSPREG00000019048) slc25a16 (ENSPREG00000019024) ENSPREG00000018976 eif4e1c (ENSPREG00000018571) si:dkey-228d14.5 (ENSPREG00000018494) zgc:110319 (ENSPREG00000018448) ccar1 (ENSPREG00000018399) stox1 (ENSPREG00000018333) si:ch211-198a12.6 (ENSPREG00000018311) zgc:154058 (ENSPREG00000018290) mat1a (ENSPREG00000018253) Guppy MODERN SPECIES 445 got1 (ENSPREG00000019685) nkx2.3 (ENSPREG00000019670) nkx3.3 (ENSPREG00000019662) slc25a28 (ENSPREG00000019641) pyroxd2 (ENSPREG00000019619) zgc:123010 (ENSPREG00000019587) ENSPREG00000019578 ENSPREG00000019565 CRTAC1 (ENSPREG00000019532) golga7ba (ENSPREG00000019525) sfrp5 (ENSPREG00000019287) zgc:171482 (ENSPREG00000019241) ENSPREG00000019229 marveld1 (ENSPREG00000019221) ENSPREG00000019215 #22 ENSPREG00000019207 #22 ENSPREG00000019193 zfand4 (ENSPREG00000019165) marchf8 (ENSPREG00000019096) alox5a (ENSPREG00000019048) slc25a16 (ENSPREG00000019024) ENSPREG00000018976 eif4e1c (ENSPREG00000018571) si:dkey-228d14.5 (ENSPREG00000018494) zgc:110319 (ENSPREG00000018448) ccar1 (ENSPREG00000018399) stox1 (ENSPREG00000018333) si:ch211-198a12.6 (ENSPREG00000018311) zgc:154058 (ENSPREG00000018290) mat1a (ENSPREG00000018253) selenou1a (ENSPREG00000018234) NAME_6 ANCESTRAL SPECIES 25 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000170691 ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935.d ENSGT00940000158935.c ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k Sailfin molly MODERN SPECIES 709 zgc:171482 (ENSPLAG00000003327) ENSPLAG00000003313 marveld1 (ENSPLAG00000003306) pgam1a (ENSPLAG00000003296) #22 ENSPLAG00000003288 ENSPLAG00000003269 zfand4 (ENSPLAG00000000051) marchf8 (ENSPLAG00000003223) alox5a (ENSPLAG00000003195) slc25a16 (ENSPLAG00000000047) ENSPLAG00000003168 Amazon molly MODERN SPECIES 438 slc25a28 (ENSPFOG00000000825) pyroxd2 (ENSPFOG00000000919) zgc:123010 (ENSPFOG00000001073) LOXL4 (ENSPFOG00000001301) CRTAC1 (ENSPFOG00000001663) golga7ba (ENSPFOG00000001906) sfrp5 (ENSPFOG00000001940) zgc:171482 (ENSPFOG00000001974) ENSPFOG00000002027 marveld1 (ENSPFOG00000002028) pgam1a (ENSPFOG00000002053) #22 ENSPFOG00000002106 ENSPFOG00000002174 zfand4 (ENSPFOG00000002464) marchf8 (ENSPFOG00000002514) alox5a (ENSPFOG00000002570) slc25a16 (ENSPFOG00000002699) ENSPFOG00000002780 ENSPFOG00000024349 eif4e1c (ENSPFOG00000002854) si:dkey-228d14.5 (ENSPFOG00000002941) zgc:110319 (ENSPFOG00000003062) ccar1 (ENSPFOG00000003164) stox1 (ENSPFOG00000003435) si:ch211-198a12.6 (ENSPFOG00000020636) ENSPFOG00000003478 Platyfish MODERN SPECIES 14 CNNM1 (ENSXMAG00000002566) got1 (ENSXMAG00000022048) nkx2.3 (ENSXMAG00000027829) nkx3.3 (ENSXMAG00000023050) slc25a28 (ENSXMAG00000002580) pyroxd2 (ENSXMAG00000002582) zgc:123010 (ENSXMAG00000002598) ENSXMAG00000024239 ENSXMAG00000029052 CRTAC1 (ENSXMAG00000002622) golga7ba (ENSXMAG00000002635) sfrp5 (ENSXMAG00000002638) zgc:171482 (ENSXMAG00000002641) ENSXMAG00000020097 marveld1 (ENSXMAG00000020099) pgam1a (ENSXMAG00000002644) #22 ENSXMAG00000002647 ENSXMAG00000002655 zfand4 (ENSXMAG00000002677) marchf8 (ENSXMAG00000028080) alox5a (ENSXMAG00000002683) slc25a16 (ENSXMAG00000002705) ENSXMAG00000021487 eif4e1c (ENSXMAG00000023567) si:dkey-228d14.5 (ENSXMAG00000021405) zgc:110319 (ENSXMAG00000002755) ccar1 (ENSXMAG00000002765) stox1 (ENSXMAG00000021387) si:ch211-198a12.6 (ENSXMAG00000002795) ENSXMAG00000002798 zgc:154058 (ENSXMAG00000022378) NAME_4 ANCESTRAL SPECIES 2 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000170691 ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k Sheepshead minnow MODERN SPECIES 113 CNNM1 (ENSCVAG00000013139) got1 (ENSCVAG00000013174) nkx2.3 (ENSCVAG00000013182) nkx3.3 (ENSCVAG00000000340) slc25a28 (ENSCVAG00000013208) pyroxd2 (ENSCVAG00000013275) zgc:123010 (ENSCVAG00000013288) ENSCVAG00000013303 LOXL4 (ENSCVAG00000013336) CRTAC1 (ENSCVAG00000013370) golga7ba (ENSCVAG00000013553) sfrp5 (ENSCVAG00000013587) zgc:171482 (ENSCVAG00000013606) ENSCVAG00000013617 marveld1 (ENSCVAG00000013627) pgam1a (ENSCVAG00000013643) #22 ENSCVAG00000013659 ENSCVAG00000013672 ENSCVAG00000013705 zfand4 (ENSCVAG00000013710) marchf8 (ENSCVAG00000013730) alox5a (ENSCVAG00000013780) slc25a16 (ENSCVAG00000013805) TET1 (ENSCVAG00000013819) eif4e1c (ENSCVAG00000013853) si:dkey-228d14.5 (ENSCVAG00000000350) zgc:110319 (ENSCVAG00000013925) ccar1 (ENSCVAG00000014095) stox1 (ENSCVAG00000014109) si:ch211-198a12.6 (ENSCVAG00000014114) ENSCVAG00000014121 Mummichog MODERN SPECIES 2448 HPSE2 (ENSFHEG00000002433) CNNM1 (ENSFHEG00000002420) got1 (ENSFHEG00000002387) nkx2.3 (ENSFHEG00000002367) nkx3.3 (ENSFHEG00000002355) slc25a28 (ENSFHEG00000002348) pyroxd2 (ENSFHEG00000002338) zgc:123010 (ENSFHEG00000002306) LOXL4 (ENSFHEG00000002295) CRTAC1 (ENSFHEG00000002264) golga7ba (ENSFHEG00000002244) sfrp5 (ENSFHEG00000002237) zgc:171482 (ENSFHEG00000002233) ENSFHEG00000002220 marveld1 (ENSFHEG00000002216) pgam1a (ENSFHEG00000002210) #22 ENSFHEG00000002203 ENSFHEG00000002187 zfand4 (ENSFHEG00000002161) marchf8 (ENSFHEG00000002146) alox5a (ENSFHEG00000002130) slc25a16 (ENSFHEG00000002120) TET1 (ENSFHEG00000002103) eif4e1c (ENSFHEG00000002097) ENSFHEG00000002091 zgc:110319 (ENSFHEG00000002083) ccar1 (ENSFHEG00000002061) stox1 (ENSFHEG00000023124) si:ch211-198a12.6 (ENSFHEG00000023114) zgc:154058 (ENSFHEG00000023108) mat1a (ENSFHEG00000023101) Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Pomacentridae ANCESTRAL SPECIES 9 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111.k ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Pomacentridae_A ANCESTRAL SPECIES 7 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111.k ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Amphiprion ANCESTRAL SPECIES 13 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111.k ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 3602 ENSAOCG00000003963 marveld1 (ENSAOCG00000003974) ENSAOCG00000002471 #22 ENSAOCG00000003986 ENSAOCG00000000122 zfand4 (ENSAOCG00000004025) marchf8 (ENSAOCG00000000137) alox5a (ENSAOCG00000004247) slc25a16 (ENSAOCG00000004314) ENSAOCG00000004330 eif4e1c (ENSAOCG00000004344) si:dkey-228d14.5 (ENSAOCG00000004352) zgc:110319 (ENSAOCG00000004360) ccar1 (ENSAOCG00000004413) stox1 (ENSAOCG00000004430) si:ch211-198a12.6 (ENSAOCG00000004437) zgc:154058 (ENSAOCG00000004448) mat1a (ENSAOCG00000004480) Clown anemonefish MODERN SPECIES 1290 ENSAOCG00000018373 #22 brdt (ENSAOCG00000018437) EPHX4 (ENSAOCG00000018479) ENSAOCG00000018486 ENSAOCG00000018505 Orange clownfish MODERN SPECIES 12 CNNM1 (ENSAPEG00000014434) ENSAPEG00000014414 got1 (ENSAPEG00000014394) nkx2.3 (ENSAPEG00000014383) nkx3.3 (ENSAPEG00000014379) slc25a28 (ENSAPEG00000014360) pyroxd2 (ENSAPEG00000014336) zgc:123010 (ENSAPEG00000014305) LOXL4 (ENSAPEG00000014247) CRTAC1 (ENSAPEG00000014202) golga7ba (ENSAPEG00000014181) sfrp5 (ENSAPEG00000014169) zgc:171482 (ENSAPEG00000014154) ENSAPEG00000014131 marveld1 (ENSAPEG00000014120) pgam1a (ENSAPEG00000014092) #22 ENSAPEG00000014065 ENSAPEG00000013906 zfand4 (ENSAPEG00000013860) marchf8 (ENSAPEG00000013815) alox5a (ENSAPEG00000013393) slc25a16 (ENSAPEG00000013338) ENSAPEG00000013312 eif4e1c (ENSAPEG00000013289) si:dkey-228d14.5 (ENSAPEG00000013274) zgc:110319 (ENSAPEG00000013265) ccar1 (ENSAPEG00000013204) stox1 (ENSAPEG00000013192) si:ch211-198a12.6 (ENSAPEG00000013186) ENSAPEG00000013175 zgc:154058 (ENSAPEG00000013165) Spiny chromis MODERN SPECIES 77 ENSAPOG00000020094 ENSAPOG00000020057 golga7ba (ENSAPOG00000020032) sfrp5 (ENSAPOG00000019995) zgc:171482 (ENSAPOG00000019970) ENSAPOG00000019941 marveld1 (ENSAPOG00000019923) pgam1a (ENSAPOG00000019913) #22 ENSAPOG00000019887 ENSAPOG00000019862 zfand4 (ENSAPOG00000019766) marchf8 (ENSAPOG00000019743) alox5a (ENSAPOG00000019693) slc25a16 (ENSAPOG00000000916) ENSAPOG00000019541 eif4e1c (ENSAPOG00000019534) si:dkey-228d14.5 (ENSAPOG00000019507) zgc:110319 (ENSAPOG00000019439) ccar1 (ENSAPOG00000019427) stox1 (ENSAPOG00000019295) si:ch211-198a12.6 (ENSAPOG00000019286) ENSAPOG00000019280 zgc:154058 (ENSAPOG00000019271) Bicolor damselfish MODERN SPECIES 405 HPSE2 (ENSSPAG00000013299) CNNM1 (ENSSPAG00000013414) got1 (ENSSPAG00000013469) nkx2.3 (ENSSPAG00000013515) nkx3.3 (ENSSPAG00000013532) slc25a28 (ENSSPAG00000013538) pyroxd2 (ENSSPAG00000013568) zgc:123010 (ENSSPAG00000013621) LOXL4 (ENSSPAG00000013636) CRTAC1 (ENSSPAG00000013676) golga7ba (ENSSPAG00000013700) sfrp5 (ENSSPAG00000013711) zgc:171482 (ENSSPAG00000013724) ENSSPAG00000013756 marveld1 (ENSSPAG00000013765) pgam1a (ENSSPAG00000013780) #22 ENSSPAG00000013802 ENSSPAG00000013847 zfand4 (ENSSPAG00000013948) marchf8 (ENSSPAG00000013969) ENSSPAG00000014019 Cichlidae ANCESTRAL SPECIES 13 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 452 HPSE2 (ENSACIG00000021851) CNNM1 (ENSACIG00000021793) got1 (ENSACIG00000021770) nkx3.3 (ENSACIG00000021761) slc25a28 (ENSACIG00000021745) pyroxd2 (ENSACIG00000021717) zgc:123010 (ENSACIG00000021684) LOXL4 (ENSACIG00000021656) CRTAC1 (ENSACIG00000021638) golga7ba (ENSACIG00000021626) sfrp5 (ENSACIG00000021531) zgc:171482 (ENSACIG00000021512) ENSACIG00000021502 marveld1 (ENSACIG00000021493) ENSACIG00000021489 #22 ENSACIG00000021475 #22 ENSACIG00000021418 zfand4 (ENSACIG00000021402) marchf8 (ENSACIG00000021390) alox5a (ENSACIG00000021356) slc25a16 (ENSACIG00000021324) ENSACIG00000021268 eif4e1c (ENSACIG00000021242) si:dkey-228d14.5 (ENSACIG00000021231) zgc:110319 (ENSACIG00000021207) ccar1 (ENSACIG00000021164) stox1 (ENSACIG00000021117) si:ch211-198a12.6 (ENSACIG00000021106) ENSACIG00000021103 zgc:154058 (ENSACIG00000021092) mat1a (ENSACIG00000021076) Midas cichlid MODERN SPECIES 452 hps1 (ENSACIG00000021933) HPSE2 (ENSACIG00000021851) CNNM1 (ENSACIG00000021793) got1 (ENSACIG00000021770) nkx3.3 (ENSACIG00000021761) slc25a28 (ENSACIG00000021745) pyroxd2 (ENSACIG00000021717) zgc:123010 (ENSACIG00000021684) LOXL4 (ENSACIG00000021656) CRTAC1 (ENSACIG00000021638) golga7ba (ENSACIG00000021626) sfrp5 (ENSACIG00000021531) zgc:171482 (ENSACIG00000021512) ENSACIG00000021502 marveld1 (ENSACIG00000021493) ENSACIG00000021489 #22 ENSACIG00000021475 #22 ENSACIG00000021418 zfand4 (ENSACIG00000021402) marchf8 (ENSACIG00000021390) alox5a (ENSACIG00000021356) slc25a16 (ENSACIG00000021324) ENSACIG00000021268 eif4e1c (ENSACIG00000021242) si:dkey-228d14.5 (ENSACIG00000021231) zgc:110319 (ENSACIG00000021207) ccar1 (ENSACIG00000021164) stox1 (ENSACIG00000021117) si:ch211-198a12.6 (ENSACIG00000021106) ENSACIG00000021103 zgc:154058 (ENSACIG00000021092) Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00940000157525.b ENSGT00940000177979 ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Haplochromini ANCESTRAL SPECIES 10 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00390000004874.a.a ENSGT00940000157525.b ENSGT00950000183082.b.b.a.a ENSGT00940000157556.a.b ENSGT00940000165452.a ENSGT00940000157049.c ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a.d ENSGT00940000160608 ENSGT00940000165757.d ENSGT00730000112219 ENSGT00510000049375 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000153997.b.b ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT00940000157520 ENSGT00940000158935 ENSGT00940000166192 ENSGT01030000234578.A.b.a.b ENSGT00940000166680 ENSGT00530000063672.a ENSGT00520000055589.c ENSGT00950000183169.C ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k ENSGT01030000234578.A.b.a.a.a.a.b Zebra mbuna MODERN SPECIES 1095 HPSE2 (ENSMZEG00005027745) CNNM1 (ENSMZEG00005027743) got1 (ENSMZEG00005027741) nkx2.3 (ENSMZEG00005027740) nkx3.3 (ENSMZEG00005027739) slc25a28 (ENSMZEG00005027738) pyroxd2 (ENSMZEG00005027734) zgc:123010 (ENSMZEG00005027733) LOXL4 (ENSMZEG00005027731) CRTAC1 (ENSMZEG00005027727) golga7ba (ENSMZEG00005027725) sfrp5 (ENSMZEG00005027723) zgc:171482 (ENSMZEG00005027721) ENSMZEG00005027720 marveld1 (ENSMZEG00005027719) pgam1a (ENSMZEG00005027718) #22 ENSMZEG00005027714 ENSMZEG00005027709 zfand4 (ENSMZEG00005027704) marchf8 (ENSMZEG00005027700) alox5a (ENSMZEG00005027695) slc25a16 (ENSMZEG00005027692) TET1 (ENSMZEG00005027690) eif4e1c (ENSMZEG00005027687) si:dkey-228d14.5 (ENSMZEG00005027686) zgc:110319 (ENSMZEG00005027685) ccar1 (ENSMZEG00005027683) stox1 (ENSMZEG00005027681) si:ch211-198a12.6 (ENSMZEG00005027680) ENSMZEG00005027679 zgc:154058 (ENSMZEG00005027678) Eastern happy MODERN SPECIES 4 CNNM1 (ENSACLG00000010047) got1 (ENSACLG00000010095) nkx2.3 (ENSACLG00000010118) nkx3.3 (ENSACLG00000010124) slc25a28 (ENSACLG00000010128) pyroxd2 (ENSACLG00000010143) zgc:123010 (ENSACLG00000010188) LOXL4 (ENSACLG00000010205) CRTAC1 (ENSACLG00000010222) golga7ba (ENSACLG00000010439) sfrp5 (ENSACLG00000010486) zgc:171482 (ENSACLG00000010511) ENSACLG00000010524 ENSACLG00000010535 marveld1 (ENSACLG00000010546) pgam1a (ENSACLG00000010556) #22 ENSACLG00000010571 ENSACLG00000010645 zfand4 (ENSACLG00000010831) marchf8 (ENSACLG00000010899) ENSACLG00000011002 alox5a (ENSACLG00000011007) slc25a16 (ENSACLG00000011057) TET1 (ENSACLG00000011097) eif4e1c (ENSACLG00000011119) si:dkey-228d14.5 (ENSACLG00000011145) zgc:110319 (ENSACLG00000011165) ccar1 (ENSACLG00000011175) stox1 (ENSACLG00000011234) si:ch211-198a12.6 (ENSACLG00000011238) ENSACLG00000011241 P. nyererei MODERN SPECIES 431 hps1 (ENSPNYG00000008230) HPSE2 (ENSPNYG00000008110) CNNM1 (ENSPNYG00000008062) got1 (ENSPNYG00000008027) nkx3.3 (ENSPNYG00000008015) slc25a28 (ENSPNYG00000007955) pyroxd2 (ENSPNYG00000007911) zgc:123010 (ENSPNYG00000007893) LOXL4 (ENSPNYG00000007859) CRTAC1 (ENSPNYG00000007818) golga7ba (ENSPNYG00000007803) sfrp5 (ENSPNYG00000007783) zgc:171482 (ENSPNYG00000007773) marveld1 (ENSPNYG00000007758) ENSPNYG00000007749 pgam1a (ENSPNYG00000007741) #22 ENSPNYG00000007729 ENSPNYG00000007646 zfand4 (ENSPNYG00000007604) marchf8 (ENSPNYG00000007575) alox5a (ENSPNYG00000007540) slc25a16 (ENSPNYG00000007500) TET1 (ENSPNYG00000007484) eif4e1c (ENSPNYG00000007444) si:dkey-228d14.5 (ENSPNYG00000007428) zgc:110319 (ENSPNYG00000007389) ccar1 (ENSPNYG00000007300) stox1 (ENSPNYG00000007282) si:ch211-198a12.6 (ENSPNYG00000007273) ENSPNYG00000007254 zgc:154058 (ENSPNYG00000007209) Burton s mouthbrooder MODERN SPECIES 275 HPSE2 (ENSHBUG00000023726) CNNM1 (ENSHBUG00000023711) got1 (ENSHBUG00000023679) nkx2.3 (ENSHBUG00000023642) nkx3.3 (ENSHBUG00000023635) slc25a28 (ENSHBUG00000023629) pyroxd2 (ENSHBUG00000023594) zgc:123010 (ENSHBUG00000023501) LOXL4 (ENSHBUG00000023431) CRTAC1 (ENSHBUG00000023382) golga7ba (ENSHBUG00000023337) sfrp5 (ENSHBUG00000023302) zgc:171482 (ENSHBUG00000023289) ENSHBUG00000000713 marveld1 (ENSHBUG00000023250) pgam1a (ENSHBUG00000023233) #22 ENSHBUG00000023217 ENSHBUG00000023180 zfand4 (ENSHBUG00000023124) marchf8 (ENSHBUG00000023102) alox5a (ENSHBUG00000023049) slc25a16 (ENSHBUG00000022972) TET1 (ENSHBUG00000022943) eif4e1c (ENSHBUG00000022939) si:dkey-228d14.5 (ENSHBUG00000022915) zgc:110319 (ENSHBUG00000022908) ccar1 (ENSHBUG00000022896) stox1 (ENSHBUG00000022770) si:ch211-198a12.6 (ENSHBUG00000022762) ENSHBUG00000022756 zgc:154058 (ENSHBUG00000022736) Lyretail cichlid MODERN SPECIES 295 CNNM1 (ENSNBRG00000021257) got1 (ENSNBRG00000021229) nkx3.3 (ENSNBRG00000021221) slc25a28 (ENSNBRG00000021206) pyroxd2 (ENSNBRG00000021183) zgc:123010 (ENSNBRG00000021157) ENSNBRG00000021137 ENSNBRG00000021119 ENSNBRG00000021101 CRTAC1 (ENSNBRG00000021083) golga7ba (ENSNBRG00000021066) sfrp5 (ENSNBRG00000021056) zgc:171482 (ENSNBRG00000021035) marveld1 (ENSNBRG00000021023) ENSNBRG00000021015 pgam1a (ENSNBRG00000021002) #22 ENSNBRG00000020995 ENSNBRG00000020927 zfand4 (ENSNBRG00000020908) marchf8 (ENSNBRG00000020900) alox5a (ENSNBRG00000020869) slc25a16 (ENSNBRG00000020851) TET1 (ENSNBRG00000020812) eif4e1c (ENSNBRG00000020784) si:dkey-228d14.5 (ENSNBRG00000020761) zgc:110319 (ENSNBRG00000020752) ccar1 (ENSNBRG00000020668) stox1 (ENSNBRG00000020614) si:ch211-198a12.6 (ENSNBRG00000020608) zgc:154058 (ENSNBRG00000020577) mat1a (ENSNBRG00000020548) Nile tilapia MODERN SPECIES 4 CNNM1 (ENSONIG00000018340) ENSONIG00000030907 got1 (ENSONIG00000018342) nkx2-3 (ENSONIG00000034563) nkx3.3 (ENSONIG00000018347) slc25a28 (ENSONIG00000034190) pyroxd2 (ENSONIG00000018349) zgc:123010 (ENSONIG00000018353) LOXL4 (ENSONIG00000018355) CRTAC1 (ENSONIG00000018358) golga7ba (ENSONIG00000018362) sfrp5 (ENSONIG00000018364) zgc:171482 (ENSONIG00000018365) ENSONIG00000033910 marveld1 (ENSONIG00000033243) pgam1a (ENSONIG00000018366) #22 ENSONIG00000018368 zfand4 (ENSONIG00000018374) marchf8 (ENSONIG00000028453) alox5a (ENSONIG00000018377) slc25a16 (ENSONIG00000018396) TET1 (ENSONIG00000033407) ENSONIG00000041501 eif4e1c (ENSONIG00000018400) ENSONIG00000018370 si:dkey-228d14.5 (ENSONIG00000018414) zgc:110319 (ENSONIG00000041926) ccar1 (ENSONIG00000018419) stox1 (ENSONIG00000018431) si:ch211-198a12.6 (ENSONIG00000021241) ENSONIG00000018432 Tiger tail seahorse MODERN SPECIES 511 pgam1b (ENSHCOG00000004303) #22 ENSHCOG00000004291 ENSHCOG00000004281 ENSHCOG00000004266 zfand4 (ENSHCOG00000004248) marchf8 (ENSHCOG00000004199) alox5a (ENSHCOG00000004181) alox5a (ENSHCOG00000004172) ccdc93 (ENSHCOG00000004164) slc25a16 (ENSHCOG00000004156) ENSHCOG00000004135 eif4e1c (ENSHCOG00000004116) si:dkey-228d14.5 (ENSHCOG00000004102) zgc:110319 (ENSHCOG00000004095) ccar1 (ENSHCOG00000004083) stox1 (ENSHCOG00000004039) Pinecone sodierfish MODERN SPECIES 6 CNNM1 (ENSMMDG00005009709) got1 (ENSMMDG00005009694) nkx2.3 (ENSMMDG00005009689) nkx3.3 (ENSMMDG00005009687) slc25a28 (ENSMMDG00005009667) pyroxd2 (ENSMMDG00005009398) zgc:123010 (ENSMMDG00005009376) LOXL4 (ENSMMDG00005008634) CRTAC1 (ENSMMDG00005008370) golga7ba (ENSMMDG00005008357) sfrp5 (ENSMMDG00005008355) zgc:171482 (ENSMMDG00005008352) ENSMMDG00005008349 marveld1 (ENSMMDG00005008346) pi4k2a (ENSMMDG00005008344) ENSMMDG00005008342 #22 ENSMMDG00005008337 ENSMMDG00005008329 zfand4 (ENSMMDG00005008325) marchf8 (ENSMMDG00005008320) alox5a (ENSMMDG00005008303) slc25a16 (ENSMMDG00005008266) ENSMMDG00005008123 eif4e1c (ENSMMDG00005008114) ENSMMDG00005008109 zgc:110319 (ENSMMDG00005008099) ccar1 (ENSMMDG00005008087) stox1 (ENSMMDG00005008079) si:ch211-198a12.6 (ENSMMDG00005008075) zgc:154058 (ENSMMDG00005008074) mat1a (ENSMMDG00005007582) Cod MODERN SPECIES 6 pkdcca (ENSGMOG00000002754) prph2b (ENSGMOG00000002745) ENSGMOG00000031532 ENSGMOG00000000833 ACSS1 (ENSGMOG00000017472) ENSGMOG00000034012 ENTPD6 (ENSGMOG00000002346) DNAAF10 (ENSGMOG00000026435) PNO1 (ENSGMOG00000001448) C1D (ENSGMOG00000013911) ENSGMOG00000025603 SPRED2 (ENSGMOG00000032899) ENSGMOG00000006487 ENSGMOG00000020233 ENSGMOG00000006493 ENSGMOG00000006569 #22 ENSGMOG00000006578 ENSGMOG00000006605 ZFAND4 (ENSGMOG00000006650) marchf8 (ENSGMOG00000006671) alox5a (ENSGMOG00000006677) ENSGMOG00000029870 eif4e1c (ENSGMOG00000006731) si:dkey-228d14.5 (ENSGMOG00000006744) zgc:110319 (ENSGMOG00000015309) ccar1 (ENSGMOG00000006757) stox1 (ENSGMOG00000034873) ENSGMOG00000030442 ENSGMOG00000036175 zgc:154058 (ENSGMOG00000031801) mat1a (ENSGMOG00000006848) Protacanthopterygii ANCESTRAL SPECIES 9 ENSGT01000000216166.A ENSGT00940000161036.B.b ENSGT00940000162476 ENSGT00390000007125.a ENSGT00940000164861 ENSGT00940000161036.B.a ENSGT00940000157042.c.a.w ENSGT00940000157042.c.a.x ENSGT00390000013726.c ENSGT00390000000134.a.d.b.a.b.a ENSGT00940000160608 ENSGT00940000165757.c.a ENSGT00940000165757.d.m.b ENSGT00510000049375 ENSGT00730000112219 ENSGT00950000182926.b.d.a.a.b #22 ENSGT00530000064017.a ENSGT00940000157049.c ENSGT00940000165452.a ENSGT00940000157556.a.b ENSGT00950000183082.b.b.a.a ENSGT00940000157525.b ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000165889 ENSGT00940000153956.b ENSGT00730000111173.g ENSGT00940000162611.a.a.b ENSGT00940000154965.A ENSGT00940000157322.b.a ENSGT00940000157331.b.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 235 ENSGT00940000157186.d.c ENSGT00390000007125.a.c.b ENSGT00940000164861 ENSGT00940000161036.B.a.c ENSGT00940000157042.c.a.x ENSGT00390000013726.c ENSGT00390000000134.a.d.b.a.b.a ENSGT00940000160608.e ENSGT00940000165757.c.a ENSGT00940000165757.d.m.b ENSGT00510000049375.h ENSGT00730000112219 ENSGT00390000010434.b.d.a ENSGT00950000182926.b.d.a.a.b.g #22 ENSGT00530000064017.a.e ENSGT00940000157049.c.a ENSGT00940000165452.a.g ENSGT00940000157556.a.b.e ENSGT00950000183082.b.b.a.a.d.a ENSGT00940000157525.b.c ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000163723.A.f.a ENSGT00510000049375.g ENSGT00390000010434.b.d.b ENSGT00950000182926.b.d.a.a.b.h #22 ENSGT00530000064017.a.f ENSGT00940000157049.c.b.b ENSGT00940000165452.a.h Salmoninae_a ANCESTRAL SPECIES 16 ENSGT00950000183002.C.c.a ENSGT00940000154078.a.a.b.g ENSGT00940000157186.d.c ENSGT00390000007125.a.c.b ENSGT00940000164861 ENSGT00940000161036.B.a.c ENSGT00940000157042.c.a.x ENSGT00390000013726.c ENSGT00390000000134.a.d.b.a.b.a ENSGT00940000160608.e ENSGT00940000165757.c.a.a ENSGT00940000165757.d.m.b ENSGT00510000049375.h ENSGT00730000112219 ENSGT00390000010434.b.d.a ENSGT00950000182926.b.d.a.a.b.g #22 ENSGT00530000064017.a.e ENSGT00940000157049.c.a ENSGT00940000165452.a.g ENSGT00940000157556.a.b.e ENSGT00950000183082.b.b.a.a.d.a ENSGT00940000157525.b.c ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000162611.a.a.b.a ENSGT00940000154965.A.b ENSGT00940000157322.b.a.e.a.b ENSGT00940000157331.b.b ENSGT00940000153408.A.ab.b ENSGT00950000183045.A.a.b ENSGT00940000157134.g Salmo ANCESTRAL SPECIES 23 ENSGT01030000234641.b.a.b.a.a.h.a ENSGT00950000183002.C.c.a ENSGT00940000154078.a.a.b.g ENSGT00940000157186.d.c ENSGT00390000007125.a.c.b ENSGT00940000164861 ENSGT00940000161036.B.a.c ENSGT00940000157042.c.a.x ENSGT00390000013726.c ENSGT00390000000134.a.d.b.a.b.a ENSGT00940000160608.e ENSGT00940000165757.c.a.a ENSGT00940000165757.d.m.b ENSGT00510000049375.h ENSGT00390000010434.b.d.a ENSGT00950000182926.b.d.a.a.b.g #22 ENSGT00530000064017.a.e ENSGT00940000157049.c.a ENSGT00940000165452.a.g ENSGT00940000157556.a.b.e ENSGT00950000183082.b.b.a.a.d.a ENSGT00940000157525.b.c ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000162611.a.a.b.a ENSGT00940000154965.A.b ENSGT00940000157322.b.a.e.a.b ENSGT00940000157331.b.b ENSGT00940000153408.A.ab.a.a ENSGT00950000183045.A.a.b ENSGT00940000157134.g River trout MODERN SPECIES 9 pdzd7a (ENSSTUG00000029259) ENSSTUG00000029315 lzts2a (ENSSTUG00000029318) SEMA4G (ENSSTUG00000029333) ENSSTUG00000029406 pyroxd2 (ENSSTUG00000029431) zgc:123010 (ENSSTUG00000029719) LOXL4 (ENSSTUG00000029733) CRTAC1 (ENSSTUG00000029788) golga7ba (ENSSTUG00000030070) sfrp5 (ENSSTUG00000030084) zgc:171482 (ENSSTUG00000030120) ENSSTUG00000030137 marveld1 (ENSSTUG00000030144) pi4k2a (ENSSTUG00000030160) ENSSTUG00000030263 #22 ENSSTUG00000030279 slc25a28 (ENSSTUG00000030300) nkx3.3 (ENSSTUG00000030314) nkx2.3 (ENSSTUG00000030317) got1 (ENSSTUG00000030324) CNNM1 (ENSSTUG00000030339) HPSE2 (ENSSTUG00000033415) hps1 (ENSSTUG00000033428) ENSSTUG00000033539 ENSSTUG00000033530 slit1a (ENSSTUG00000033922) ARHGAP19 (ENSSTUG00000045255) XPO5 (ENSSTUG00000045278) ENSSTUG00000045608 khdrbs2 (ENSSTUG00000045622) Atlantic salmon MODERN SPECIES ENSSSAG00000000220 ENSSSAG00000000243 pyroxd2 (ENSSSAG00000000317) ENSSSAG00000092416 zgc:123010 (ENSSSAG00000000491) LOXL4 (ENSSSAG00000000522) crtac1 (ENSSSAG00000000725) ENSSSAG00000113491 ENSSSAG00000116855 ENSSSAG00000000967 ENSSSAG00000085188 sfrp5 (ENSSSAG00000122261) zgc:171482 (ENSSSAG00000000977) ENSSSAG00000120201 ENSSSAG00000075457 pgam1 (ENSSSAG00000001006) #22 ENSSSAG00000001009 slc25a28 (ENSSSAG00000096756) nkx3.3 (ENSSSAG00000001020) nkx2-3 (ENSSSAG00000001022) got1 (ENSSSAG00000075564) CNNM1 (ENSSSAG00000075572) HPSE2 (ENSSSAG00000114675) hps1 (ENSSSAG00000001071) ENSSSAG00000093017 ENSSSAG00000113366 ENSSSAG00000088082 ENSSSAG00000001168 ARHGAP19 (ENSSSAG00000001541) ENSSSAG00000077679 ENSSSAG00000001853 Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000154078.a.a.b.g ENSGT00940000157186.d.c ENSGT00940000159115.d ENSGT00390000007125.a.c.b ENSGT00940000164861 ENSGT00940000161036.B.a.c ENSGT00940000157042.c.a.x ENSGT00390000013726.c ENSGT00390000000134.a.d.b.a.b.a ENSGT00940000160608.e ENSGT00940000165757.c.a.a ENSGT00940000165757.d.m.b ENSGT00510000049375.h ENSGT00730000112219 ENSGT00390000010434.b.d.a ENSGT00950000182926.b.d.a.a.b.g #22 ENSGT00530000064017.a.e ENSGT00940000157049.c.a ENSGT00940000165452.a.g ENSGT00940000157556.a.b.e ENSGT00950000183082.b.b.a.a.d.a ENSGT00940000157525.b.c ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000162611.a.a.b.a ENSGT00940000154965.A.b ENSGT00940000157322.b.a.e.a.a.a ENSGT00940000157331.b.b ENSGT00940000153408.A.ab.b ENSGT00950000183045.A.a.b ENSGT00940000157134.g Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00950000183002.C.c.a ENSGT00940000154078.a.a.b.g ENSGT00940000157186.d.c ENSGT00940000159115.d ENSGT00390000007125.a.c.b ENSGT00940000164861 ENSGT00940000161036.B.a.c ENSGT00940000157042.c.a.x ENSGT00390000013726.c ENSGT00390000000134.a.d.b.a.b.a ENSGT00940000160608.e ENSGT00940000165757.c.a.a ENSGT00940000165757.d.m.b ENSGT00510000049375.h ENSGT00390000010434.b.d.a ENSGT00950000182926.b.d.a.a.b.g #22 ENSGT00530000064017.a.e ENSGT00940000157049.c.a ENSGT00940000165452.a.g ENSGT00940000157556.a.b.e ENSGT00950000183082.b.b.a.a.d.a ENSGT00940000157525.b.c ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000162611.a.a.b.a ENSGT00940000154965.A.b ENSGT00940000157322.b.a.e.a.a.a ENSGT00940000157331.b.b ENSGT00940000153408.A.ab.b ENSGT00950000183045.A.a.b ENSGT00940000157134.g Chinook salmon MODERN SPECIES pdzd7a (ENSOTSG00005034578) lzts2a (ENSOTSG00005034581) SEMA4G (ENSOTSG00005034586) ENSOTSG00005034691 ENSOTSG00005034693 pyroxd2 (ENSOTSG00005034694) zgc:123010 (ENSOTSG00005034718) LOXL4 (ENSOTSG00005034720) CRTAC1 (ENSOTSG00005034724) golga7ba (ENSOTSG00005034732) sfrp5 (ENSOTSG00005034735) zgc:171482 (ENSOTSG00005034736) ENSOTSG00005034738 marveld1 (ENSOTSG00005034739) pi4k2a (ENSOTSG00005034743) ENSOTSG00005034757 #22 ENSOTSG00005034758 slc25a28 (ENSOTSG00005034771) nkx3.3 (ENSOTSG00005034773) nkx2.3 (ENSOTSG00005034778) got1 (ENSOTSG00005034780) CNNM1 (ENSOTSG00005034781) HPSE2 (ENSOTSG00005034782) hps1 (ENSOTSG00005005581) ENSOTSG00005005582 ENSOTSG00005005583 ENSOTSG00005005584 ARHGAP19 (ENSOTSG00005005585) XPO5 (ENSOTSG00005005617) ENSOTSG00005007655 khdrbs2 (ENSOTSG00005007669) Coho salmon MODERN SPECIES 2 sfxn3 (ENSOKIG00005002723) ENSOKIG00005002716 pdzd7a (ENSOKIG00005002692) lzts2a (ENSOKIG00005002678) SEMA4G (ENSOKIG00005002624) ENSOKIG00005002606 pyroxd2 (ENSOKIG00005002542) zgc:123010 (ENSOKIG00005002515) LOXL4 (ENSOKIG00005002470) CRTAC1 (ENSOKIG00005002299) golga7ba (ENSOKIG00005002166) sfrp5 (ENSOKIG00005002138) zgc:171482 (ENSOKIG00005002110) marveld1 (ENSOKIG00005002094) PI4K2A (ENSOKIG00005002051) ENSOKIG00005002018 #22 ENSOKIG00005001992 slc25a28 (ENSOKIG00005001976) nkx3.3 (ENSOKIG00005001963) nkx2.3 (ENSOKIG00005001956) got1 (ENSOKIG00005046953) CNNM1 (ENSOKIG00005046942) HPSE2 (ENSOKIG00005046923) hps1 (ENSOKIG00005046906) ENSOKIG00005046894 ENSOKIG00005046888 slit1a (ENSOKIG00005046443) ARHGAP19 (ENSOKIG00005046354) XPO5 (ENSOKIG00005046247) ENSOKIG00005046187 khdrbs2 (ENSOKIG00005046157) Rainbow trout MODERN SPECIES 15 ENSOMYG00000021781 pyroxd2 (ENSOMYG00000021800) zgc:123010 (ENSOMYG00000021827) LOXL4 (ENSOMYG00000021844) CRTAC1 (ENSOMYG00000021911) GOLGA7B (ENSOMYG00000051786) ENSOMYG00000069969 ENSOMYG00000062644 sfrp5 (ENSOMYG00000021969) zgc:171482 (ENSOMYG00000021987) ENSOMYG00000050779 ENSOMYG00000062940 marveld1 (ENSOMYG00000021995) ENSOMYG00000055216 ENSOMYG00000022064 ENSOMYG00000022339 #22 ENSOMYG00000022351 slc25a28 (ENSOMYG00000022375) nkx3.3 (ENSOMYG00000022398) nkx2.3 (ENSOMYG00000022417) got1 (ENSOMYG00000022428) CNNM1 (ENSOMYG00000022440) HPSE2 (ENSOMYG00000022482) hps1 (ENSOMYG00000022522) ENSOMYG00000022546 ENSOMYG00000022554 ENSOMYG00000024345 ENSOMYG00000054411 ARHGAP19 (ENSOMYG00000034469) ENSOMYG00000034753 ENSOMYG00000056476 Huchen MODERN SPECIES 1828 ENSHHUG00000021281 marveld1 (ENSHHUG00000021289) pi4k2a (ENSHHUG00000021295) ENSHHUG00000021335 #22 ENSHHUG00000021420 slc25a28 (ENSHHUG00000021446) dnajc27 (ENSHHUG00000021468) Salmoninae ANCESTRAL SPECIES 235 ENSGT00510000049375.h ENSGT00730000112219 ENSGT00390000010434.b.d.a ENSGT00950000182926.b.d.a.a.b.g #22 ENSGT00530000064017.a.e ENSGT00940000157049.c.a ENSGT00940000165452.a.g ENSGT00940000157556.a.b.e ENSGT00950000183082.b.b.a.a.d.a ENSGT00940000157525.b.c ENSGT00390000004874.a.a.tb ENSGT00390000015298 ENSGT00940000163723.A.f.a ENSGT00510000049375.g ENSGT00390000010434.b.d.b ENSGT00950000182926.b.d.a.a.b.h #22 ENSGT00530000064017.a.f ENSGT00940000157049.c.b.b ENSGT00940000165452.a.h ENSGT00940000157556.a.b.f ENSGT00950000183082.b.b.a.a.d.b ENSGT00940000157525.b.d ENSGT00390000004874.a.a.ub ENSGT00940000165889 ENSGT00940000153956.b ENSGT00730000111173.g ENSGT00940000162611.a.a.b.b ENSGT00940000154965.A.a ENSGT00940000157322.b.a.e.b ENSGT00940000162611.a.a.b.a ENSGT00940000154965.A.b Salmoninae_a ANCESTRAL SPECIES 38 ENSGT00940000157364.B.d ENSGT00940000154292.a.b.d.h.a.a ENSGT00940000177029.b ENSGT00530000063603.B.h ENSGT00390000011433.s.a.f ENSGT00390000012017 ENSGT00940000157846.c.c ENSGT00950000182836.b.b.b.b.l ENSGT00940000165701.g ENSGT00990000204854.d ENSGT00940000155293.a.a.i ENSGT00940000165757.c.b.b ENSGT00940000163723.A.f.a ENSGT00510000049375.g ENSGT00390000010434.b.d.b ENSGT00950000182926.b.d.a.a.b.h #22 ENSGT00530000064017.a.f ENSGT00940000157049.c.b.b ENSGT00940000165452.a.h ENSGT00940000157556.a.b.f ENSGT00950000183082.b.b.a.a.d.b.a.b ENSGT00950000183082.b.b.a.a.d.b.b ENSGT00940000157525.b.d ENSGT00390000004874.a.a.ub ENSGT00940000165889 ENSGT00940000153956.b ENSGT00730000111173.g ENSGT00940000162611.a.a.b.b ENSGT00940000154965.A.a ENSGT00940000157322.b.a.e.b ENSGT00970000193390.c.a.b.a.a.a Oncorhynchus ANCESTRAL SPECIES 23 ENSGT00940000158817.e ENSGT00940000157364.B.d ENSGT00940000154292.a.b.d.h.a.a ENSGT00940000177029.b ENSGT00530000063603.B.h ENSGT00390000011433.s.a.f ENSGT00390000012017 ENSGT00940000157846.c.c ENSGT00950000182836.b.b.b.b.l ENSGT00940000165701.g ENSGT00940000155293.a.a.i ENSGT00940000165757.c.a.b ENSGT01060000253683 ENSGT00510000049375.g ENSGT00390000010434.b.d.b ENSGT00950000182926.b.d.a.a.b.h #22 ENSGT00530000064017.a.f ENSGT00940000157049.c.b.b ENSGT00940000165452.a.h ENSGT00940000157556.a.b.f ENSGT00950000183082.b.b.a.a.d.b.b ENSGT00940000157525.b.d ENSGT00390000004874.a.a.ub ENSGT00940000165889 ENSGT00940000153956.b ENSGT00730000111173.g ENSGT00940000162611.a.a.b.b ENSGT00940000154965.A.a ENSGT00940000157322.b.a.e.b ENSGT00970000193390.c.a.b.a.a.a.b ENSGT00970000193390.c.a.b.a.a.a.a.a Oncorhynchus_a ANCESTRAL SPECIES 18 ENSGT00940000158817.e ENSGT00940000157364.B.d ENSGT00940000154292.a.b.d.h.a.a ENSGT00940000177029.b ENSGT00530000063603.B.h ENSGT00390000011433.s.a.f ENSGT00390000012017 ENSGT00940000157846.c.c ENSGT00950000182836.b.b.b.b.l ENSGT00940000165701.g ENSGT00940000155293.a.a.i ENSGT00940000165757.c.a.b ENSGT01060000253683 ENSGT00510000049375.g ENSGT00390000010434.b.d.b ENSGT00950000182926.b.d.a.a.b.h #22 ENSGT00530000064017.a.f ENSGT00940000157049.c.b.b ENSGT00940000165452.a.h ENSGT00940000157556.a.b.f ENSGT00950000183082.b.b.a.a.d.b.b ENSGT00940000157525.b.d ENSGT00390000004874.a.a.ub ENSGT00940000165889 ENSGT00940000153956.b ENSGT00730000111173.g ENSGT00940000162611.a.a.b.b ENSGT00940000154965.A.a ENSGT00940000157322.b.a.e.b ENSGT00970000193390.c.a.b.a.a.a.b ENSGT00970000193390.c.a.b.a.a.a.a.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 3005 slc25a28 (ENSOTSG00005039703) ENSOTSG00005039705 ENSOTSG00005039707 #22 pi4k2a (ENSOTSG00005039727) marveld1 (ENSOTSG00005039801) ENSOTSG00005039803 ENSOTSG00005039814 ENSOTSG00005039818 pi4k2a (ENSOTSG00005039829) ENSOTSG00005039941 #22 ENSOTSG00005039943 slc25a28 (ENSOTSG00005039947) nkx3.3 (ENSOTSG00005039949) nkx2.3 (ENSOTSG00005039950) got1 (ENSOTSG00005039951) CNNM1 (ENSOTSG00005039953) HPSE2 (ENSOTSG00005039955) ENSOTSG00005039960 st3gal7 (ENSOTSG00005039961) morn4 (ENSOTSG00005039963) ENSOTSG00005039967 ENSOTSG00005039966 slit1a (ENSOTSG00005039978) Chinook salmon MODERN SPECIES 3005 ENSOTSG00005039960 HPSE2 (ENSOTSG00005039955) CNNM1 (ENSOTSG00005039953) got1 (ENSOTSG00005039951) nkx2.3 (ENSOTSG00005039950) nkx3.3 (ENSOTSG00005039949) slc25a28 (ENSOTSG00005039947) ENSOTSG00005039943 ENSOTSG00005039941 #22 pi4k2a (ENSOTSG00005039829) ENSOTSG00005039818 ENSOTSG00005039814 ENSOTSG00005039803 marveld1 (ENSOTSG00005039801) pi4k2a (ENSOTSG00005039727) ENSOTSG00005039707 #22 ENSOTSG00005039705 slc25a28 (ENSOTSG00005039703) Coho salmon MODERN SPECIES 17 LHCGR (ENSOKIG00005009460) NRXN1 (ENSOKIG00005009580) ERLEC1 (ENSOKIG00005011136) PSME4 (ENSOKIG00005012067) ENSOKIG00005012249 ENSOKIG00005012263 THBS2 (ENSOKIG00005012323) agpat4 (ENSOKIG00005012600) ENSOKIG00005012935 ENSOKIG00005018075 kcnk1b (ENSOKIG00005018080) ENSOKIG00005018083 ENSOKIG00005018091 MARVELD1 (ENSOKIG00005018097) ENSOKIG00005018101 ENSOKIG00005018154 #22 ENSOKIG00005018168 slc25a28 (ENSOKIG00005018176) nkx3.3 (ENSOKIG00005018199) nkx2.3 (ENSOKIG00005018206) got1 (ENSOKIG00005018218) CNNM1 (ENSOKIG00005018273) HPSE2 (ENSOKIG00005018314) ENSOKIG00005018361 st3gal7 (ENSOKIG00005018367) ENSOKIG00005018379 morn4 (ENSOKIG00005018386) ENSOKIG00005018396 ENSOKIG00005018414 SLIT1 (ENSOKIG00005018648) ENSOKIG00005023662 Rainbow trout MODERN SPECIES 12 ENSOMYG00000035998 ENSOMYG00000052965 ENSOMYG00000058306 ENSOMYG00000049636 ERLEC1 (ENSOMYG00000036803) ENSOMYG00000036954 ENSOMYG00000037387 ENSOMYG00000037486 agpat4 (ENSOMYG00000037674) ENSOMYG00000038592 kcnk1b (ENSOMYG00000043033) ENSOMYG00000048427 ENSOMYG00000071543 ENSOMYG00000043047 ENSOMYG00000043052 ENSOMYG00000043076 #22 ENSOMYG00000055904 slc25a28 (ENSOMYG00000043085) nkx3.3 (ENSOMYG00000043095) nkx2.3 (ENSOMYG00000043096) got1 (ENSOMYG00000043106) ENSOMYG00000043114 CNNM1 (ENSOMYG00000043115) HPSE2 (ENSOMYG00000043124) ENSOMYG00000050654 st3gal7 (ENSOMYG00000043139) ENSOMYG00000043152 ENSOMYG00000043163 ENSOMYG00000049940 ENSOMYG00000043157 ENSOMYG00000043182 Salmo ANCESTRAL SPECIES 38 ENSGT00940000158817.e ENSGT00940000157364.B.d ENSGT00940000154292.a.b.d.h.a.a ENSGT00530000063603.B.h ENSGT00390000011433.s.a.f ENSGT00390000012017 ENSGT00940000157846.c.c ENSGT00950000182836.b.b.b.b.l ENSGT00940000165701.g ENSGT00990000204854.d ENSGT00940000155293.a.a.i ENSGT00940000165757.c.b.b ENSGT00940000163723.A.f.a ENSGT00510000049375.g ENSGT00390000010434.b.d.b ENSGT00950000182926.b.d.a.a.b.h #22 ENSGT00530000064017.a.f ENSGT00940000157049.c.b.a.a ENSGT00940000165452.a.h ENSGT00940000157556.a.b.f ENSGT00950000183082.b.b.a.a.d.b.a.b ENSGT00950000183082.b.b.a.a.d.b.b ENSGT00940000157525.b.d ENSGT00390000004874.a.a.ub ENSGT00940000165889 ENSGT00940000153956.b ENSGT00730000111173.g ENSGT00940000162611.a.a.b.b ENSGT00940000154965.A.a ENSGT00940000157322.b.a.e.b ENSGT00970000193390.c.a.b.a.a.a River trout MODERN SPECIES 1 erlec1 (ENSSTUG00000015971) ENSSTUG00000016069 ENSSTUG00000016224 ENSSTUG00000016231 THBS2 (ENSSTUG00000016312) ENSSTUG00000018109 agpat4 (ENSSTUG00000018116) ENSSTUG00000018149 ENSSTUG00000018776 kcnk1b (ENSSTUG00000018792) zgc:171482 (ENSSTUG00000018804) ENSSTUG00000018821 ENSSTUG00000018828 marveld1 (ENSSTUG00000018853) pi4k2a (ENSSTUG00000018858) ENSSTUG00000018882 #22 ENSSTUG00000018905 slc25a28 (ENSSTUG00000018986) nkx3.3 (ENSSTUG00000019026) nkx2.3 (ENSSTUG00000019037) got1 (ENSSTUG00000019061) CNNM1 (ENSSTUG00000019181) HPSE2 (ENSSTUG00000019224) st3gal7 (ENSSTUG00000019350) ENSSTUG00000030526 morn4 (ENSSTUG00000030530) ENSSTUG00000030543 ENSSTUG00000030548 slit1a (ENSSTUG00000030646) ENSSTUG00000033390 XPO5 (ENSSTUG00000033420) Huchen MODERN SPECIES 3480 ENSHHUG00000014648 marveld1 (ENSHHUG00000014701) pi4k2a (ENSHHUG00000014704) ENSHHUG00000014752 #22 ENSHHUG00000014780 slc25a28 (ENSHHUG00000014789) Northern pike MODERN SPECIES 5 ENSELUG00000030833 ENSELUG00000022066 ENSELUG00000022076 pyroxd2 (ENSELUG00000022056) zgc:123010 (ENSELUG00000022008) LOXL4 (ENSELUG00000021966) CRTAC1 (ENSELUG00000021908) golga7ba (ENSELUG00000021864) sfrp5 (ENSELUG00000021837) zgc:171482 (ENSELUG00000021817) ENSELUG00000030584 ENSELUG00000021778 marveld1 (ENSELUG00000021766) ENSELUG00000021760 pi4k2a (ENSELUG00000021744) ENSELUG00000021705 #22 ENSELUG00000021674 slc25a28 (ENSELUG00000021579) nkx3.3 (ENSELUG00000021562) nkx2.3 (ENSELUG00000021555) got1 (ENSELUG00000021545) CNNM1 (ENSELUG00000021501) HPSE2 (ENSELUG00000021468) hps1 (ENSELUG00000021455) morn4 (ENSELUG00000021411) ENSELUG00000021368 slit1a (ENSELUG00000021342) ARHGAP19 (ENSELUG00000021067) XPO5 (ENSELUG00000021008) khdrbs2 (ENSELUG00000020898) prim2 (ENSELUG00000020852) Actinopterygii ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.b #22 Neopterygii ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.b #22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.b #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.b #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.a.b #22 Acanthomorphata ANCESTRAL SPECIES 39 ENSGT00940000166336 ENSGT00940000154394.b.a.a.b.a.b ENSGT00940000165036.b ENSGT00940000156783.k ENSGT00940000164791.a.b ENSGT01100000263541.a.a.a.b.a.b.a ENSGT01100000263541.a.a.a.a ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT00940000165757.d ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000167543 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT01100000263541.a.a.a.b.a.b.a ENSGT01100000263541.a.a.a.b.a.b.b ENSGT00940000165021.b ENSGT00640000091565 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000167543 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b Percomorphaceae ANCESTRAL SPECIES 20 ENSGT01100000263541.a.a.a.b.a.b.b ENSGT00940000165021.b ENSGT00640000091565 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Tiger tail seahorse MODERN SPECIES 382 adra2c (ENSHCOG00000018813) lrpap1 (ENSHCOG00000018818) DOK7 (ENSHCOG00000018836) rgs12b (ENSHCOG00000018923) rgs12b (ENSHCOG00000019013) htt (ENSHCOG00000019192) grk4 (ENSHCOG00000019618) ENSHCOG00000019634 ENSHCOG00000019734 get3 (ENSHCOG00000019744) BEST2 (ENSHCOG00000019780) JUNB (ENSHCOG00000019803) prdx2 (ENSHCOG00000000531) ptger1a (ENSHCOG00000019818) pi4k2a (ENSHCOG00000019860) ENSHCOG00000019874 #22 exosc1 (ENSHCOG00000019882) ENSHCOG00000019887 gprc5bb (ENSHCOG00000019896) ENSHCOG00000019907 ENSHCOG00000020044 TSC2 (ENSHCOG00000020228) NTHL1 (ENSHCOG00000020273) ENSHCOG00000020383 TNPO2 (ENSHCOG00000020440) ENSHCOG00000020459 RFX1 (ENSHCOG00000020466) DCAF15 (ENSHCOG00000020472) khsrp (ENSHCOG00000020488) ENSHCOG00000020514 zfyve27 (ENSHCOG00000020524) Percomorphaceae_B ANCESTRAL SPECIES ENSGT01030000234801 ENSGT00970000193486 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00950000182977.A.i.b.a.b.b.b.a ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Ovalentaria ANCESTRAL SPECIES ENSGT00970000193486 ENSGT01030000234801 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00950000182977.A.i.b.a.b.b.b.a ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Atherinomorphae ANCESTRAL SPECIES 23 ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801 ENSGT00970000193466 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Cyprinodontiformes ANCESTRAL SPECIES 24 ENSGT00950000182977.A.i.b.a.b.b.b.b.r.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.a.a ENSGT01030000234801 ENSGT00970000193466 ENSGT00950000182977.A.i.b.a.b.b.b.b.r.a.b ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.b ENSGT01030000234801.b.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.a.b ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Poeciliinae ANCESTRAL SPECIES 9 ENSGT00390000001390.a.a.b ENSGT01030000234801.b.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.a.a.b.a.b ENSGT00950000182894.B.l.a.a ENSGT00940000176048 ENSGT00950000182894.B.k ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT00940000178572 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000155366.b.a.b.j ENSGT00940000167543 ENSGT00940000155366.b.a.b.i ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Poecilia ANCESTRAL SPECIES 6 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT01030000234801.b.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.a.a.b.a.b ENSGT00950000182894.B.l.a.b.a ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT00940000178572 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000155366.b.a.b.j ENSGT00940000167543 ENSGT00940000155366.b.a.b.i ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f NAME_6 ANCESTRAL SPECIES 96 ENSGT00950000182894.B.l.a.b.a ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT01030000234810 ENSGT00940000155366.b.a.b.j ENSGT00940000155366.b.a.b.i ENSGT00940000165523.a ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Sailfin molly MODERN SPECIES 1651 zfyve27 (ENSPLAG00000005767) ENSPLAG00000000709 ENSPLAG00000005780 ENSPLAG00000005797 pi4k2a (ENSPLAG00000000117) ENSPLAG00000005848 #22 exosc1 (ENSPLAG00000005880) ENSPLAG00000005893 gprc5bb (ENSPLAG00000005914) ENSPLAG00000005922 ENSPLAG00000005948 ENSPLAG00000005969 ENSPLAG00000005994 Amazon molly MODERN SPECIES 506 ENSPFOG00000007730 ENSPFOG00000024285 ENSPFOG00000007684 tekt4 (ENSPFOG00000007624) LOXL4 (ENSPFOG00000007413) ENSPFOG00000007379 crtac1a (ENSPFOG00000007229) golga7ba (ENSPFOG00000007191) zfyve27 (ENSPFOG00000007066) ENSPFOG00000023259 pi4k2a (ENSPFOG00000006926) ENSPFOG00000023827 pi4k2a (ENSPFOG00000006874) ENSPFOG00000006834 #22 exosc1 (ENSPFOG00000006755) ENSPFOG00000023981 gprc5bb (ENSPFOG00000006731) ENSPFOG00000024098 ENSPFOG00000023385 ENSPFOG00000006675 TSC2 (ENSPFOG00000006024) NTHL1 (ENSPFOG00000005951) ENSPFOG00000005908 TNPO2 (ENSPFOG00000005417) RFX1 (ENSPFOG00000005148) DCAF15 (ENSPFOG00000005125) khsrp (ENSPFOG00000004577) ENSPFOG00000004443 ENSPFOG00000004403 Guppy MODERN SPECIES 439 socs1b (ENSPREG00000000387) ENSPREG00000000388 chtf18 (ENSPREG00000000389) ENSPREG00000000390 gng13a (ENSPREG00000000393) ENSPREG00000000394 ENSPREG00000000395 syngr3b (ENSPREG00000000396) ENSPREG00000000397 ENSPREG00000000398 zfyve27 (ENSPREG00000000399) ENSPREG00000000400 ENSPREG00000000401 ENSPREG00000000402 pi4k2a (ENSPREG00000000403) ENSPREG00000000404 #22 exosc1 (ENSPREG00000000405) ENSPREG00000000406 gprc5bb (ENSPREG00000000407) ENSPREG00000000408 si:ch211-202h22.9 (ENSPREG00000000409) si:ch211-202h22.8 (ENSPREG00000000410) ENSPREG00000000411 ENSPREG00000000412 TSC2 (ENSPREG00000000413) NTHL1 (ENSPREG00000000414) TNPO2 (ENSPREG00000000415) rln3b (ENSPREG00000000416) RFX1 (ENSPREG00000000417) DCAF15 (ENSPREG00000000418) khsrp (ENSPREG00000000419) Platyfish MODERN SPECIES 19 ENSXMAG00000028730 ENSXMAG00000021567 ENSXMAG00000028906 LOXL4 (ENSXMAG00000012635) ENSXMAG00000012655 ENSXMAG00000027701 ENSXMAG00000026385 ENSXMAG00000028596 crtac1a (ENSXMAG00000012661) golga7ba (ENSXMAG00000012682) zfyve27 (ENSXMAG00000012689) ENSXMAG00000022653 ENSXMAG00000023007 ENSXMAG00000027706 pi4k2a (ENSXMAG00000027594) ENSXMAG00000012705 #22 exosc1 (ENSXMAG00000023382) ENSXMAG00000012720 gprc5bb (ENSXMAG00000012722) ENSXMAG00000028535 ENSXMAG00000021027 ENSXMAG00000024512 ENSXMAG00000012731 ENSXMAG00000023143 ENSXMAG00000012736 TSC2 (ENSXMAG00000012749) NTHL1 (ENSXMAG00000012778) ENSXMAG00000012783 TNPO2 (ENSXMAG00000012793) rln3b (ENSXMAG00000012850) RFX1 (ENSXMAG00000012853) NAME_4 ANCESTRAL SPECIES 28 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.b ENSGT00950000182977.A.i.b.a.b.b.b.b.r.a.a.a ENSGT01030000234801.a ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT01030000234810 ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Mummichog MODERN SPECIES 715 tekt4 (ENSFHEG00000008775) LOXL4 (ENSFHEG00000008818) ENSFHEG00000008845 crtac1a (ENSFHEG00000008893) golga7ba (ENSFHEG00000008916) zfyve27 (ENSFHEG00000009079) ENSFHEG00000009100 pi4k2a (ENSFHEG00000009129) ENSFHEG00000009146 #22 exosc1 (ENSFHEG00000009154) ENSFHEG00000009163 gprc5bb (ENSFHEG00000009174) ENSFHEG00000009195 ENSFHEG00000009233 Sheepshead minnow MODERN SPECIES 166 EPN3 (ENSCVAG00000017194) b3gntl1 (ENSCVAG00000017188) METRNL (ENSCVAG00000017132) ENSCVAG00000017115 ENSCVAG00000017065 ENSCVAG00000017046 tekt4 (ENSCVAG00000017039) LOXL4 (ENSCVAG00000017028) ENSCVAG00000017017 crtac1a (ENSCVAG00000016973) golga7ba (ENSCVAG00000016896) zfyve27 (ENSCVAG00000016859) ENSCVAG00000016837 ENSCVAG00000016829 pi4k2a (ENSCVAG00000016820) ENSCVAG00000016767 #22 exosc1 (ENSCVAG00000016748) ENSCVAG00000016705 gprc5bb (ENSCVAG00000016694) ENSCVAG00000016687 ENSCVAG00000016682 ENSCVAG00000016673 ENSCVAG00000016664 ENSCVAG00000016654 necab2 (ENSCVAG00000016634) SLC38A8 (ENSCVAG00000016623) mbtps1 (ENSCVAG00000016591) pskh1 (ENSCVAG00000016413) parp12a (ENSCVAG00000016405) ENSCVAG00000016394 parp12a (ENSCVAG00000016385) Aplocheiloidei ANCESTRAL SPECIES 115 ENSGT00940000165021.b ENSGT00640000091565 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00970000193486 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b Turquoise killifish MODERN SPECIES 1611 ENSNFUG00015013100 ENSNFUG00015013096 CRTAC1A (ENSNFUG00015013043) golga7ba (ENSNFUG00015013023) ZFYVE27 (ENSNFUG00015012998) ENSNFUG00015012990 Nfu_g_1_000275 (ENSNFUG00015012986) ENSNFUG00015012981 HIST1H2BD (ENSNFUG00015012978) ENSNFUG00015012975 ENSNFUG00015012972 ENSNFUG00015012968 pi4k2a (ENSNFUG00015012951) PGAM1A (ENSNFUG00015012935) #22 exosc1 (ENSNFUG00015012920) C1H16ORF88 (ENSNFUG00015012910) gprc5bb (ENSNFUG00015012899) ENSNFUG00015012888 ENSNFUG00015012874 RAB33B (ENSNFUG00015012863) naa15b (ENSNFUG00015010196) ENSNFUG00015010006 ENSNFUG00015009983 SCOC (ENSNFUG00015009965) CLGN (ENSNFUG00015008735) exosc9 (ENSNFUG00015008492) casp6a (ENSNFUG00015008416) CCDC109B (ENSNFUG00015008408) ENSNFUG00015008398 Mangrove rivulus MODERN SPECIES 304 ENSKMAG00000001687 EPN3 (ENSKMAG00000001628) b3gntl1 (ENSKMAG00000001548) METRNL (ENSKMAG00000001537) ENSKMAG00000001523 ENSKMAG00000001502 tekt4 (ENSKMAG00000001473) LOXL4 (ENSKMAG00000001454) crtac1a (ENSKMAG00000001409) golga7ba (ENSKMAG00000001385) zfyve27 (ENSKMAG00000001361) ENSKMAG00000001342 ENSKMAG00000001337 ENSKMAG00000001333 pi4k2a (ENSKMAG00000001282) ENSKMAG00000001259 #22 exosc1 (ENSKMAG00000001202) ENSKMAG00000001176 gprc5bb (ENSKMAG00000001159) si:ch211-202h22.8 (ENSKMAG00000001101) Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00970000193486 ENSGT01030000234801 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00950000182977.A.i.b.a.b.b.b.a ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Pomacentridae ANCESTRAL SPECIES 20 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801 ENSGT00970000193486 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT00940000181970 ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a.r ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Pomacentridae_A ANCESTRAL SPECIES 13 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801 ENSGT00970000193486.n ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT00940000181970 ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a.r ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Amphiprion ANCESTRAL SPECIES ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801 ENSGT00970000193486.n ENSGT00940000176048 ENSGT00950000182894.B ENSGT00970000193486.m ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a.r ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Clown anemonefish MODERN SPECIES 1275 b3gntl1 (ENSAOCG00000011058) METRNL (ENSAOCG00000011013) ENSAOCG00000001842 ENSAOCG00000010994 tekt4 (ENSAOCG00000010983) ENSAOCG00000010957 LOXL4 (ENSAOCG00000010948) ENSAOCG00000010928 crtac1a (ENSAOCG00000001840) golga7ba (ENSAOCG00000010854) zfyve27 (ENSAOCG00000010832) ENSAOCG00000010812 ENSAOCG00000010799 ENSAOCG00000010777 pi4k2a (ENSAOCG00000010764) ENSAOCG00000010722 #22 exosc1 (ENSAOCG00000010699) ENSAOCG00000010666 gprc5bb (ENSAOCG00000010656) si:ch211-202h22.8 (ENSAOCG00000010638) ENSAOCG00000010628 ENSAOCG00000010604 TSC2 (ENSAOCG00000010454) NTHL1 (ENSAOCG00000010339) NHERF2 (ENSAOCG00000010288) TNPO2 (ENSAOCG00000010152) rln3b (ENSAOCG00000002481) RFX1 (ENSAOCG00000010080) DCAF15 (ENSAOCG00000010062) khsrp (ENSAOCG00000010049) ENSAOCG00000010018 Orange clownfish MODERN SPECIES 17 b3gntl1 (ENSAPEG00000012306) METRNL (ENSAPEG00000012347) ENSAPEG00000012354 ENSAPEG00000012370 ENSAPEG00000012390 tekt4 (ENSAPEG00000012416) ENSAPEG00000012455 LOXL4 (ENSAPEG00000012469) ENSAPEG00000012487 crtac1a (ENSAPEG00000012505) golga7ba (ENSAPEG00000012545) zfyve27 (ENSAPEG00000012565) ENSAPEG00000012605 ENSAPEG00000012617 pi4k2a (ENSAPEG00000012639) ENSAPEG00000012667 #22 exosc1 (ENSAPEG00000012690) ENSAPEG00000012723 gprc5bb (ENSAPEG00000012739) si:ch211-202h22.8 (ENSAPEG00000012749) ENSAPEG00000012772 ENSAPEG00000012844 TSC2 (ENSAPEG00000012998) NTHL1 (ENSAPEG00000013130) NHERF2 (ENSAPEG00000013156) TNPO2 (ENSAPEG00000013268) rln3b (ENSAPEG00000013377) RFX1 (ENSAPEG00000013349) DCAF15 (ENSAPEG00000013391) khsrp (ENSAPEG00000013411) ENSAPEG00000013438 Spiny chromis MODERN SPECIES 26 b3gntl1 (ENSAPOG00000007467) METRNL (ENSAPOG00000007480) ENSAPOG00000007499 ENSAPOG00000000961 ENSAPOG00000007531 tekt4 (ENSAPOG00000007541) LOXL4 (ENSAPOG00000007581) ENSAPOG00000007601 crtac1a (ENSAPOG00000007643) golga7ba (ENSAPOG00000007665) zfyve27 (ENSAPOG00000007700) ENSAPOG00000007711 ENSAPOG00000007723 ENSAPOG00000007739 pi4k2a (ENSAPOG00000007792) ENSAPOG00000007805 #22 exosc1 (ENSAPOG00000007822) ENSAPOG00000007832 gprc5bb (ENSAPOG00000007837) si:ch211-202h22.8 (ENSAPOG00000007861) ENSAPOG00000007898 ENSAPOG00000008133 TSC2 (ENSAPOG00000009130) NTHL1 (ENSAPOG00000009229) ENSAPOG00000009241 TNPO2 (ENSAPOG00000009339) rln3b (ENSAPOG00000009352) RFX1 (ENSAPOG00000009380) DCAF15 (ENSAPOG00000009405) khsrp (ENSAPOG00000009524) ENSAPOG00000009597 Bicolor damselfish MODERN SPECIES 1342 ENSSPAG00000016562 ENSSPAG00000016567 ENSSPAG00000016573 LOXL4 (ENSSPAG00000016586) ENSSPAG00000016646 crtac1a (ENSSPAG00000016662) golga7ba (ENSSPAG00000016706) zfyve27 (ENSSPAG00000016725) ENSSPAG00000016747 pi4k2a (ENSSPAG00000016752) ENSSPAG00000016779 #22 exosc1 (ENSSPAG00000016792) ENSSPAG00000016808 gprc5bb (ENSSPAG00000016815) si:ch211-202h22.8 (ENSSPAG00000016826) ENSSPAG00000016832 Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00950000182894.B ENSGT00940000176048 ENSGT00940000178088 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b.m ENSGT00940000167543 ENSGT00940000155366.b.a.b.n ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Midas cichlid MODERN SPECIES 266 ENSACIG00000018654 ENSACIG00000018673 ENSACIG00000018691 ENSACIG00000018703 tekt4 (ENSACIG00000018734) ENSACIG00000018753 ENSACIG00000018772 LOXL4 (ENSACIG00000018798) ENSACIG00000018819 crtac1a (ENSACIG00000018831) golga7ba (ENSACIG00000018848) zfyve27 (ENSACIG00000018866) ENSACIG00000018920 ENSACIG00000018927 pi4k2a (ENSACIG00000018930) ENSACIG00000018943 #22 exosc1 (ENSACIG00000018956) ENSACIG00000018969 gprc5bb (ENSACIG00000018977) si:ch211-202h22.8 (ENSACIG00000018989) Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00940000175309.a ENSGT01010000226470 ENSGT00950000182894.B ENSGT00940000178088 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b.m ENSGT00940000167543 ENSGT00940000155366.b.a.b.n ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Nile tilapia MODERN SPECIES 18 ENSONIG00000030004 ENSONIG00000037706 ENSONIG00000016550 ENSONIG00000036463 ENSONIG00000041354 tekt4 (ENSONIG00000017668) ENSONIG00000032442 LOXL4 (ENSONIG00000017669) ENSONIG00000027510 crtac1a (ENSONIG00000017670) golga7ba (ENSONIG00000017672) zfyve27 (ENSONIG00000017673) ENSONIG00000028978 ENSONIG00000040860 pi4k2a (ENSONIG00000017677) pgam1 (ENSONIG00000031535) #22 exosc1 (ENSONIG00000017683) ENSONIG00000030221 gprc5bb (ENSONIG00000017688) ENSONIG00000036837 ENSONIG00000035434 ENSONIG00000028111 ENSONIG00000035666 si:ch211-202h22.8 (ENSONIG00000017691) ENSONIG00000017693 ENSONIG00000017694 TSC2 (ENSONIG00000017699) NTHL1 (ENSONIG00000017701) ENSONIG00000040853 ENSONIG00000016413 ASF1B (ENSONIG00000039569) Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00970000193466.a.a.b.a.a ENSGT01010000226470 ENSGT00950000182894.B ENSGT00940000178088 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b.m ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Lyretail cichlid MODERN SPECIES 308 ENSNBRG00000024100 ENSNBRG00000024093 tekt4 (ENSNBRG00000024082) ENSNBRG00000024079 ENSNBRG00000024075 LOXL4 (ENSNBRG00000024068) ENSNBRG00000024064 crtac1a (ENSNBRG00000024060) golga7ba (ENSNBRG00000024056) zfyve27 (ENSNBRG00000024042) ENSNBRG00000024034 ENSNBRG00000024031 ENSNBRG00000024028 pi4k2a (ENSNBRG00000024021) ENSNBRG00000024018 #22 ENSNBRG00000024011 #22 exosc1 (ENSNBRG00000024007) ENSNBRG00000024005 gprc5bb (ENSNBRG00000024001) ENSNBRG00000023995 ENSNBRG00000023992 ENSNBRG00000023974 TSC2 (ENSNBRG00000023922) NTHL1 (ENSNBRG00000023880) ENSNBRG00000023866 TNPO2 (ENSNBRG00000023849) rln3b (ENSNBRG00000023834) RFX1 (ENSNBRG00000023821) DCAF15 (ENSNBRG00000023810) khsrp (ENSNBRG00000023797) ENSNBRG00000023782 Haplochromini ANCESTRAL SPECIES 3 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00970000193466.a.a.b.a.a ENSGT01010000226470 ENSGT00950000182894.B ENSGT00940000178088 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b.m ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Burton s mouthbrooder MODERN SPECIES 337 pi4k2a (ENSHBUG00000017804) ENSHBUG00000017828 #22 exosc1 (ENSHBUG00000017857) ENSHBUG00000017874 gprc5bb (ENSHBUG00000017884) ENSHBUG00000017892 ENSHBUG00000017920 ENSHBUG00000018076 TSC2 (ENSHBUG00000018185) NTHL1 (ENSHBUG00000018223) NHERF2 (ENSHBUG00000018254) TNPO2 (ENSHBUG00000018317) rln3b (ENSHBUG00000018339) RFX1 (ENSHBUG00000001083) DCAF15 (ENSHBUG00000001095) khsrp (ENSHBUG00000018543) ENSHBUG00000018567 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00970000193466.a.a.b.a.a ENSGT01010000226470 ENSGT00950000182894.B ENSGT00940000178088 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b.m ENSGT00940000167543.i ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b P. nyererei MODERN SPECIES 360 ENSPNYG00000021391 ENSPNYG00000021434 ENSPNYG00000021500 tekt4 (ENSPNYG00000021515) ENSPNYG00000021527 ENSPNYG00000021534 LOXL4 (ENSPNYG00000021549) ENSPNYG00000021573 crtac1a (ENSPNYG00000021597) golga7ba (ENSPNYG00000021632) zfyve27 (ENSPNYG00000021641) ENSPNYG00000021660 ENSPNYG00000021670 pi4k2a (ENSPNYG00000021702) ENSPNYG00000021726 #22 exosc1 (ENSPNYG00000021745) ENSPNYG00000021765 gprc5bb (ENSPNYG00000021774) si:ch211-202h22.8 (ENSPNYG00000000691) si:ch211-202h22.9 (ENSPNYG00000000704) ENSPNYG00000000748 ENSPNYG00000000805 TSC2 (ENSPNYG00000001025) NTHL1 (ENSPNYG00000001147) NHERF2 (ENSPNYG00000001179) TNPO2 (ENSPNYG00000001235) rln3b (ENSPNYG00000001301) RFX1 (ENSPNYG00000001317) DCAF15 (ENSPNYG00000001330) khsrp (ENSPNYG00000001374) Haplochromini_B ANCESTRAL SPECIES 23 ENSGT00970000193466.a.a.b.b.a ENSGT00950000182977.A.i.b.a.b.b.b.b.s.a.b.a ENSGT00950000182894.B ENSGT00940000178088 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543.j ENSGT00940000167543.i ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005006690 ENSMZEG00005006715 ENSMZEG00005006751 ENSMZEG00005006757 ENSMZEG00005006778 ENSMZEG00005006786 tekt4 (ENSMZEG00005006802) ENSMZEG00005006812 LOXL4 (ENSMZEG00005006838) ENSMZEG00005006887 crtac1a (ENSMZEG00005006919) golga7ba (ENSMZEG00005006955) zfyve27 (ENSMZEG00005006973) ENSMZEG00005006989 pi4k2a (ENSMZEG00005006999) ENSMZEG00005007028 #22 exosc1 (ENSMZEG00005007042) ENSMZEG00005007069 gprc5bb (ENSMZEG00005007079) si:ch211-202h22.9 (ENSMZEG00005007105) ENSMZEG00005007160 si:ch211-202h22.9 (ENSMZEG00005007175) ENSMZEG00005007208 ENSMZEG00005007255 TSC2 (ENSMZEG00005007304) NTHL1 (ENSMZEG00005007375) NHERF2 (ENSMZEG00005007390) TNPO2 (ENSMZEG00005007408) rln3b (ENSMZEG00005007510) RFX1 (ENSMZEG00005007468) DCAF15 (ENSMZEG00005007530) Eastern happy MODERN SPECIES 18 ENSACLG00000021651 ENSACLG00000021628 ENSACLG00000021618 ENSACLG00000021611 ENSACLG00000021588 tekt4 (ENSACLG00000021539) ENSACLG00000021518 LOXL4 (ENSACLG00000021492) ENSACLG00000021464 crtac1a (ENSACLG00000021423) golga7ba (ENSACLG00000021396) zfyve27 (ENSACLG00000021368) ENSACLG00000021361 ENSACLG00000021348 pi4k2a (ENSACLG00000021296) ENSACLG00000021276 #22 exosc1 (ENSACLG00000021243) ENSACLG00000021223 gprc5bb (ENSACLG00000021197) si:ch211-202h22.9 (ENSACLG00000021189) si:ch211-202h22.9 (ENSACLG00000021163) ENSACLG00000021043 ENSACLG00000020920 TSC2 (ENSACLG00000020810) NTHL1 (ENSACLG00000020790) NHERF2 (ENSACLG00000020749) TNPO2 (ENSACLG00000020672) rln3b (ENSACLG00000020651) RFX1 (ENSACLG00000020623) DCAF15 (ENSACLG00000020575) khsrp (ENSACLG00000020487) Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00950000182977.A.i.b.a.b.b.b.a ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Eupercaria ANCESTRAL SPECIES 2 ENSGT00970000193486 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Tetraodontidae ANCESTRAL SPECIES 33 ENSGT01100000263541.a.a.a.b.a.b.a ENSGT00940000158217.a.b ENSGT01050000244997 ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT01070000253760.b.a.a.a.b.d.a.a.a ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01080000257510 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Fugu MODERN SPECIES 8 dnajb1b (ENSTRUG00000005217) ENSTRUG00000027015 zgc:172091 (ENSTRUG00000005347) EPN3 (ENSTRUG00000005396) b3gntl1 (ENSTRUG00000025854) METRNL (ENSTRUG00000026720) ENSTRUG00000006039 ENSTRUG00000025000 tekt4 (ENSTRUG00000006068) LOXL4 (ENSTRUG00000006290) crtac1a (ENSTRUG00000006661) GOLGA7B (ENSTRUG00000030132) zfyve27 (ENSTRUG00000007009) ENSTRUG00000025853 pi4k2a (ENSTRUG00000007240) ENSTRUG00000007592 #22 exosc1 (ENSTRUG00000007706) ENSTRUG00000028722 ENSTRUG00000019969 ENSTRUG00000031389 gprc5bb (ENSTRUG00000007794) ENSTRUG00000023512 ENSTRUG00000030559 ENSTRUG00000007938 ENSTRUG00000030483 TSC2 (ENSTRUG00000008958) NTHL1 (ENSTRUG00000009279) ENSTRUG00000024458 TNPO2 (ENSTRUG00000009453) DCAF15 (ENSTRUG00000010245) RFX1 (ENSTRUG00000010058) Tetraodon MODERN SPECIES 10 PIK3R5 (ENSTNIG00000014093) ndufb7 (ENSTNIG00000014092) tecrb (ENSTNIG00000014091) dnajb1b (ENSTNIG00000014090) zgc:172091 (ENSTNIG00000000853) EPN3 (ENSTNIG00000014089) ENSTNIG00000014088 METRNL (ENSTNIG00000014087) ENSTNIG00000014086 tekt4 (ENSTNIG00000014085) LOXL4 (ENSTNIG00000014084) ENSTNIG00000004459 crtac1a (ENSTNIG00000014083) zfyve27 (ENSTNIG00000014082) pi4k2a (ENSTNIG00000014081) ENSTNIG00000014080 #22 exosc1 (ENSTNIG00000014079) ENSTNIG00000001675 gprc5bb (ENSTNIG00000014078) si:ch211-202h22.8 (ENSTNIG00000014077) ENSTNIG00000014076 ENSTNIG00000014075 TSC2 (ENSTNIG00000014074) NTHL1 (ENSTNIG00000014073) NHERF2 (ENSTNIG00000014072) TNPO2 (ENSTNIG00000014071) rln3b (ENSTNIG00000014070) RFX1 (ENSTNIG00000014069) DCAF15 (ENSTNIG00000014068) khsrp (ENSTNIG00000014067) ENSTNIG00000014066 Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00970000193486 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Ballan wrasse MODERN SPECIES 82 ENSLBEG00000011965 ENSLBEG00000011946 ENSLBEG00000011923 ENSLBEG00000011903 ENSLBEG00000011880 pcdh17 (ENSLBEG00000011863) diaph3 (ENSLBEG00000011829) ENSLBEG00000011809 tdrd3 (ENSLBEG00000011777) PCDH20 (ENSLBEG00000011758) ENSLBEG00000011740 golga7ba (ENSLBEG00000011714) zfyve27 (ENSLBEG00000011638) ENSLBEG00000011588 pi4k2a (ENSLBEG00000011532) ENSLBEG00000011501 #22 exosc1 (ENSLBEG00000011448) ENSLBEG00000011406 gprc5bb (ENSLBEG00000011374) si:ch211-202h22.8 (ENSLBEG00000011330) ENSLBEG00000011275 ENSLBEG00000011064 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000175309 ENSGT01030000234801.f ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801.e ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Perciformes ANCESTRAL SPECIES 2 ENSGT00970000193486 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801.e ENSGT00940000175309 ENSGT01010000226470 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000167543 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Cottioidei ANCESTRAL SPECIES 3 ENSGT00940000165021.b ENSGT01010000230201 ENSGT00940000158217.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00970000193486 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Lumpfish MODERN SPECIES ENSCLMG00005009577 ENSCLMG00005009614 ENSCLMG00005009615 b3gntl1 (ENSCLMG00005009616) METRNL (ENSCLMG00005009618) ENSCLMG00005009619 tekt4 (ENSCLMG00005009620) LOXL4 (ENSCLMG00005009624) crtac1a (ENSCLMG00005009667) golga7ba (ENSCLMG00005009671) zfyve27 (ENSCLMG00005009673) ENSCLMG00005009676 ENSCLMG00005009677 ENSCLMG00005009678 pi4k2a (ENSCLMG00005009679) ENSCLMG00005009684 #22 exosc1 (ENSCLMG00005009687) ENSCLMG00005009688 gprc5bb (ENSCLMG00005009689) si:ch211-202h22.8 (ENSCLMG00005009691) ENSCLMG00005009694 ENSCLMG00005009707 TSC2 (ENSCLMG00005009758) NTHL1 (ENSCLMG00005013479) ENSCLMG00005013490 TNPO2 (ENSCLMG00005013504) rln3b (ENSCLMG00005013510) RFX1 (ENSCLMG00005013511) DCAF15 (ENSCLMG00005013512) khsrp (ENSCLMG00005013530) ENSCLMG00005013535 Stickleback MODERN SPECIES 4 ENSGACG00000018877 zgc:172091 (ENSGACG00000018880) ENSGACG00000018881 ENSGACG00000018885 ENSGACG00000018886 ENSGACG00000018889 EPN3 (ENSGACG00000018890) b3gntl1 (ENSGACG00000018895) ENSGACG00000018898 ENSGACG00000018899 tekt4 (ENSGACG00000018901) crtac1a (ENSGACG00000018906) golga7ba (ENSGACG00000018915) zfyve27 (ENSGACG00000018920) pi4k2a (ENSGACG00000018925) ENSGACG00000018928 #22 exosc1 (ENSGACG00000018936) ENSGACG00000018937 gprc5bb (ENSGACG00000018939) ENSGACG00000018941 ENSGACG00000018944 ENSGACG00000018946 TSC2 (ENSGACG00000018952) NTHL1 (ENSGACG00000018961) ENSGACG00000018966 TNPO2 (ENSGACG00000018968) rln3b (ENSGACG00000018985) RFX1 (ENSGACG00000018987) ENSGACG00000018989 khsrp (ENSGACG00000018990) ENSGACG00000018992 Perciformes_a ANCESTRAL SPECIES ENSGT01030000234801.f ENSGT00970000193486 ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801.e ENSGT00940000175309 ENSGT01010000226470 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT01030000234810 ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 Pike perch MODERN SPECIES 8 ENSSLUG00000000453 ENSSLUG00000000449 ENSSLUG00000000438 ENSSLUG00000000432 ENSSLUG00000000427 ENSSLUG00000000420 tekt4 (ENSSLUG00000000414) LOXL4 (ENSSLUG00000000338) ENSSLUG00000000299 crtac1a (ENSSLUG00000000236) golga7ba (ENSSLUG00000000191) zfyve27 (ENSSLUG00000000170) ENSSLUG00000000155 ENSSLUG00000000152 pi4k2a (ENSSLUG00000000147) ENSSLUG00000000141 #22 exosc1 (ENSSLUG00000000138) ENSSLUG00000000134 gprc5bb (ENSSLUG00000000130) si:ch211-202h22.8 (ENSSLUG00000000125) ENSSLUG00000000122 ENSSLUG00000000118 ENSSLUG00000000109 ENSSLUG00000000103 ENSSLUG00000014303 TSC2 (ENSSLUG00000013501) NTHL1 (ENSSLUG00000013306) NHERF2 (ENSSLUG00000013266) ENSSLUG00000013256 TNPO2 (ENSSLUG00000013231) rln3b (ENSSLUG00000013218) Channel bull blenny MODERN SPECIES EPN3 (ENSCGOG00000000248) b3gntl1 (ENSCGOG00000000252) METRNL (ENSCGOG00000000260) ENSCGOG00000000262 ENSCGOG00000000263 ENSCGOG00000000264 tekt4 (ENSCGOG00000000265) LOXL4 (ENSCGOG00000000267) ENSCGOG00000000271 crtac1a (ENSCGOG00000000295) golga7ba (ENSCGOG00000000327) zfyve27 (ENSCGOG00000000335) ENSCGOG00000000338 ENSCGOG00000000340 pi4k2a (ENSCGOG00000000347) ENSCGOG00000000399 #22 exosc1 (ENSCGOG00000000415) ENSCGOG00000000423 gprc5bb (ENSCGOG00000000426) si:ch211-202h22.8 (ENSCGOG00000000427) ENSCGOG00000000431 ENSCGOG00000000436 TSC2 (ENSCGOG00000000669) NTHL1 (ENSCGOG00000001046) ENSCGOG00000001048 ENSCGOG00000001050 TNPO2 (ENSCGOG00000001070) rln3b (ENSCGOG00000001529) RFX1 (ENSCGOG00000001533) DCAF15 (ENSCGOG00000001536) khsrp (ENSCGOG00000001537) Eupecaria_C ANCESTRAL SPECIES 22 ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT01030000234801.f ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00970000193486 ENSGT00940000176048 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Gilthead seabream MODERN SPECIES ENSSAUG00010026344 ENSSAUG00010000109 EPN3 (ENSSAUG00010000114) b3gntl1 (ENSSAUG00010000115) METRNL (ENSSAUG00010000125) ENSSAUG00010000133 ENSSAUG00010000142 tekt4 (ENSSAUG00010000148) LOXL4 (ENSSAUG00010000214) CRTAC-2 (ENSSAUG00010000335) golga7ba (ENSSAUG00010000359) zfyve27 (ENSSAUG00010000371) ENSSAUG00010000382 ENSSAUG00010000386 pi4k2a (ENSSAUG00010000394) ENSSAUG00010000406 #22 exosc1 (ENSSAUG00010000416) ENSSAUG00010000428 gprc5bb (ENSSAUG00010000431) si:ch211-202h22.8 (ENSSAUG00010000435) ENSSAUG00010000443 ENSSAUG00010000455 TSC2 (ENSSAUG00010000535) ENSSAUG00010000684 NTHL1 (ENSSAUG00010000688) NHERF2 (ENSSAUG00010000692) rln3b (ENSSAUG00010000707) RFX1 (ENSSAUG00010000722) DCAF15 (ENSSAUG00010000956) khsrp (ENSSAUG00010000961) ENSSAUG00010000972 Eupercaria_incertae_sedis ANCESTRAL SPECIES 21 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT01030000234801.f ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00970000193486 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 European seabass MODERN SPECIES 20 ENSDLAG00005028177 ENSDLAG00005034543 ENSDLAG00005030982 ENSDLAG00005017040 ENSDLAG00005017509 ENSDLAG00005034778 ENSDLAG00005017490 LOXL4 (ENSDLAG00005017174) ENSDLAG00005029075 crtac1a (ENSDLAG00005017015) golga7ba (ENSDLAG00005029996) zfyve27 (ENSDLAG00005016747) ENSDLAG00005032420 ENSDLAG00005016718 pi4k2a (ENSDLAG00005016694) ENSDLAG00005016686 #22 exosc1 (ENSDLAG00005033231) ENSDLAG00005034275 gprc5bb (ENSDLAG00005016651) si:ch211-202h22.8 (ENSDLAG00005016640) ENSDLAG00005028711 ENSDLAG00005016525 ENSDLAG00005013572 NTHL1 (ENSDLAG00005013367) ENSDLAG00005013310 ENSDLAG00005013013 ENSDLAG00005012795 ENSDLAG00005012653 ENSDLAG00005012611 ENSDLAG00005032778 ENSDLAG00005012490 Large yellow croaker MODERN SPECIES 481 METRNL (ENSLCRG00005000422) ENSLCRG00005000420 ENSLCRG00005000418 ENSLCRG00005000413 ENSLCRG00005000410 tekt4 (ENSLCRG00005000405) LOXL4 (ENSLCRG00005000380) ENSLCRG00005000366 crtac1a (ENSLCRG00005000353) golga7ba (ENSLCRG00005000341) zfyve27 (ENSLCRG00005000313) ENSLCRG00005000292 ENSLCRG00005000285 ENSLCRG00005000279 pi4k2a (ENSLCRG00005000270) ENSLCRG00005000264 #22 exosc1 (ENSLCRG00005000252) ENSLCRG00005000236 gprc5bb (ENSLCRG00005000231) ENSLCRG00005000226 si:ch211-202h22.8 (ENSLCRG00005000211) ENSLCRG00005018859 ENSLCRG00005018854 TSC2 (ENSLCRG00005018730) NTHL1 (ENSLCRG00005018720) ENSLCRG00005018718 TNPO2 (ENSLCRG00005018678) rln3b (ENSLCRG00005018676) RFX1 (ENSLCRG00005018665) DCAF15 (ENSLCRG00005018661) khsrp (ENSLCRG00005018659) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00970000193486 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Carangaria ANCESTRAL SPECIES ENSGT00640000091565 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Pleuronectoidei ANCESTRAL SPECIES 22 ENSGT00940000164791.a.b ENSGT01100000263541.a.a.a.a ENSGT01100000263541.a.a.a.b.a.b.a ENSGT00940000165021.b ENSGT00640000091565 ENSGT00940000158217.a.b ENSGT01050000244997 ENSGT00390000001390.a.a.b ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 ENSGT00940000161004 Turbot MODERN SPECIES 20 ENSSMAG00000003281 ENSSMAG00000003288 ENSSMAG00000003293 ENSSMAG00000027697 ENSSMAG00000003312 ENSSMAG00000003364 ENSSMAG00000003393 ENSSMAG00000036666 ENSSMAG00000003496 ENSSMAG00000003517 LOXL4 (ENSSMAG00000003548) crtac1a (ENSSMAG00000003585) golga7ba (ENSSMAG00000003611) zfyve27 (ENSSMAG00000003635) pi4k2a (ENSSMAG00000003697) ENSSMAG00000003705 #22 exosc1 (ENSSMAG00000003721) ENSSMAG00000003742 gprc5bb (ENSSMAG00000003751) si:ch211-202h22.8 (ENSSMAG00000027722) ENSSMAG00000003770 ENSSMAG00000003898 ENSSMAG00000004015 ENSSMAG00000004029 ENSSMAG00000004050 rln3b (ENSSMAG00000004103) ENSSMAG00000004130 DCAF15 (ENSSMAG00000004136) khsrp (ENSSMAG00000004167) ENSSMAG00000004382 ENSSMAG00000004626 Tongue sole MODERN SPECIES 3 HPSE2 (ENSCSEG00000006339) CNNM1 (ENSCSEG00000006403) got1 (ENSCSEG00000006415) nkx2.3 (ENSCSEG00000006432) nkx3.3 (ENSCSEG00000006437) slc25a28 (ENSCSEG00000006441) pyroxd2 (ENSCSEG00000006444) zgc:123010 (ENSCSEG00000006468) LOXL4 (ENSCSEG00000006478) CRTAC1 (ENSCSEG00000006493) golga7ba (ENSCSEG00000006502) sfrp5 (ENSCSEG00000006506) zgc:171482 (ENSCSEG00000006509) ENSCSEG00000006514 marveld1 (ENSCSEG00000006515) PGAM1 (ENSCSEG00000006519) #22 ENSCSEG00000006534 ENSCSEG00000006553 zfand4 (ENSCSEG00000006564) ENSCSEG00000006577 alox5a (ENSCSEG00000006607) slc25a16 (ENSCSEG00000006645) ENSCSEG00000006668 eif4e1c (ENSCSEG00000006680) si:dkey-228d14.5 (ENSCSEG00000006688) zgc:110319 (ENSCSEG00000006699) ccar1 (ENSCSEG00000006707) ENSCSEG00000006729 si:ch211-198a12.6 (ENSCSEG00000006739) ENSCSEG00000006742 zgc:154058 (ENSCSEG00000006748) Carangaria_A ANCESTRAL SPECIES 24 ENSGT00640000091565 ENSGT00940000158217.a.b ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Seriola ANCESTRAL SPECIES 11 ENSGT00390000006933 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT01030000234801.i ENSGT01030000234801.j ENSGT00950000182894.B ENSGT00940000176048 ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.d ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b Greater amberjack MODERN SPECIES 84 METRNL (ENSSDUG00000003349) ENSSDUG00000003340 ENSSDUG00000003332 ENSSDUG00000003322 ENSSDUG00000003302 tekt4 (ENSSDUG00000003285) ENSSDUG00000003270 LOXL4 (ENSSDUG00000003218) ENSSDUG00000003198 crtac1a (ENSSDUG00000003165) golga7ba (ENSSDUG00000003142) zfyve27 (ENSSDUG00000003115) ENSSDUG00000003088 ENSSDUG00000003075 pi4k2a (ENSSDUG00000003046) ENSSDUG00000003026 #22 exosc1 (ENSSDUG00000002993) ENSSDUG00000002977 gprc5bb (ENSSDUG00000002956) si:ch211-202h22.8 (ENSSDUG00000002946) ENSSDUG00000002933 ENSSDUG00000002829 TSC2 (ENSSDUG00000002733) NTHL1 (ENSSDUG00000002707) ENSSDUG00000002684 NHERF2 (ENSSDUG00000002671) TNPO2 (ENSSDUG00000002607) rln3b (ENSSDUG00000002552) RFX1 (ENSSDUG00000002511) DCAF15 (ENSSDUG00000002448) khsrp (ENSSDUG00000002390) Yellowtail amberjack MODERN SPECIES 2885 LOXL4 (ENSSLDG00000000108) ENSSLDG00000025243 crtac1a (ENSSLDG00000025237) golga7ba (ENSSLDG00000025228) zfyve27 (ENSSLDG00000025207) ENSSLDG00000025205 ENSSLDG00000025199 pi4k2a (ENSSLDG00000025187) ENSSLDG00000025184 #22 exosc1 (ENSSLDG00000025181) ENSSLDG00000025179 gprc5bb (ENSSLDG00000025176) si:ch211-202h22.8 (ENSSLDG00000025172) ENSSLDG00000025170 ENSSLDG00000025144 TSC2 (ENSSLDG00000025122) Barramundi perch MODERN SPECIES 123 LOXL4 (ENSLCAG00010006191) ENSLCAG00010006182 crtac1a (ENSLCAG00010006005) golga7ba (ENSLCAG00010005949) zfyve27 (ENSLCAG00010005935) ENSLCAG00010005928 pi4k2a (ENSLCAG00010005882) ENSLCAG00010005821 #22 ENSLCAG00010005806 gprc5bb (ENSLCAG00010005800) si:ch211-202h22.8 (ENSLCAG00010005793) ENSLCAG00010005790 TSC2 (ENSLCAG00010005725) NTHL1 (ENSLCAG00010005701) ENSLCAG00010005699 ENSLCAG00010005697 TNPO2 (ENSLCAG00010005579) rln3b (ENSLCAG00010005555) RFX1 (ENSLCAG00010005546) DCAF15 (ENSLCAG00010005539) khsrp (ENSLCAG00010005531) ENSLCAG00010005528 ENSLCAG00010005525 Anabantaria ANCESTRAL SPECIES 1 ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00970000193486 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Anabantoidei ANCESTRAL SPECIES ENSGT00390000001390.a.a.b ENSGT00950000182977.A.i.b.a.b.b.b.b ENSGT00970000193486 ENSGT00940000175309 ENSGT01030000234801 ENSGT00950000182894.B ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.c ENSGT00390000013298 ENSGT01100000263491.a.b.b.c.a.b ENSGT01080000257510 ENSGT01030000234958 ENSGT00390000010434.b ENSGT00950000182926.b.d.a.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b ENSGT00940000165523.a ENSGT00940000167012 ENSGT00950000183139.C ENSGT00510000047513 ENSGT00950000182849.B.c.a.a ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f ENSGT00390000011987 ENSGT00940000156051.c.b ENSGT00940000158786 Climbing perch MODERN SPECIES ENSATEG00000018392 ENSATEG00000018178 ENSATEG00000018345 ENSATEG00000025583 ENSATEG00000018368 ENSATEG00000021245 LOXL4 (ENSATEG00000018449) ENSATEG00000018522 crtac1a (ENSATEG00000018541) golga7ba (ENSATEG00000018581) zfyve27 (ENSATEG00000018601) ENSATEG00000027447 ENSATEG00000018633 ENSATEG00000018623 pi4k2a (ENSATEG00000018646) ENSATEG00000018664 #22 exosc1 (ENSATEG00000029576) ENSATEG00000018717 gprc5bb (ENSATEG00000018727) ENSATEG00000026213 ENSATEG00000018761 ENSATEG00000018835 ENSATEG00000018855 ENSATEG00000018872 ENSATEG00000019014 NTHL1 (ENSATEG00000019126) ENSATEG00000019157 ENSATEG00000019171 rln3b (ENSATEG00000019231) ENSATEG00000019287 DCAF15 (ENSATEG00000019319) Siamese fighting fish MODERN SPECIES ENSBSLG00000006497 ENSBSLG00000006382 ENSBSLG00000005952 ENSBSLG00000005951 ENSBSLG00000005947 ENSBSLG00000005945 ENSBSLG00000005940 ENSBSLG00000005937 LOXL4 (ENSBSLG00000005920) ENSBSLG00000005910 crtac1a (ENSBSLG00000005892) golga7ba (ENSBSLG00000005878) zfyve27 (ENSBSLG00000005830) ENSBSLG00000005821 pi4k2a (ENSBSLG00000005720) ENSBSLG00000005656 #22 exosc1 (ENSBSLG00000005635) ENSBSLG00000005612 gprc5bb (ENSBSLG00000005598) si:ch211-202h22.8 (ENSBSLG00000005591) ENSBSLG00000005530 ENSBSLG00000004967 ENSBSLG00000004138 NTHL1 (ENSBSLG00000003736) ENSBSLG00000003578 ENSBSLG00000002997 RFX1 (ENSBSLG00000002955) DCAF15 (ENSBSLG00000002948) khsrp (ENSBSLG00000002924) ENSBSLG00000002718 ENSBSLG00000002654 Zig-zag eel MODERN SPECIES ENSMAMG00000024377 ENSMAMG00000012600 ENSMAMG00000012558 ENSMAMG00000012542 b3gntl1 (ENSMAMG00000012467) ENSMAMG00000012449 ENSMAMG00000012411 ENSMAMG00000012390 LOXL4 (ENSMAMG00000012383) ENSMAMG00000024891 crtac1a (ENSMAMG00000012320) golga7ba (ENSMAMG00000012305) zfyve27 (ENSMAMG00000012278) ENSMAMG00000012261 pi4k2a (ENSMAMG00000012224) ENSMAMG00000012220 #22 exosc1 (ENSMAMG00000012200) ENSMAMG00000026091 gprc5bb (ENSMAMG00000012178) si:ch211-202h22.8 (ENSMAMG00000012162) ENSMAMG00000012152 ENSMAMG00000012069 ENSMAMG00000011960 NTHL1 (ENSMAMG00000011946) ENSMAMG00000011928 ENSMAMG00000011862 rln3b (ENSMAMG00000011852) ENSMAMG00000011826 DCAF15 (ENSMAMG00000011813) ENSMAMG00000011746 ENSMAMG00000011734 Actinopterygii ANCESTRAL SPECIES 47 ENSGT00940000165452.a ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00390000007125.a ENSGT00940000162476 ENSGT00940000164861 ENSGT00940000161036.B ENSGT00940000157042 ENSGT00530000063711.b ENSGT00390000013726 ENSGT00390000000134.a ENSGT00940000160608 ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00950000182926.b.d.b #22 ENSGT00940000158630 ENSGT00390000013106 ENSGT00940000166659 ENSGT00950000182926.b.d.a.a #22 ENSGT00390000015287 ENSGT00390000000464 ENSGT00940000155032 ENSGT00390000015583 Neopterygii ANCESTRAL SPECIES 18 ENSGT00940000165452.a ENSGT00940000157049 ENSGT01100000263540.B.c ENSGT00390000007125.a ENSGT00940000162476 ENSGT00940000164861 ENSGT00940000161036.B ENSGT00940000157042 ENSGT00530000063711.b ENSGT00390000013726 ENSGT00390000000134.a ENSGT00940000160608 ENSGT00390000013298 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00950000182926.b.d.b #22 ENSGT00940000158630 ENSGT00390000013106 ENSGT00940000157727 ENSGT00890000139463.b.b.a ENSGT00390000014726 ENSGT00940000159802 ENSGT00940000157214 ENSGT00940000161964 ENSGT00940000153692.B.a ENSGT00950000183015.B.b ENSGT00940000160066 ENSGT00940000155133.a ENSGT00940000153692.B.b ENSGT00950000183015.B.a.b ENSGT00940000165944 Osteoglossocephalai ANCESTRAL SPECIES 213 ENSGT00940000165452.a ENSGT00940000157049 ENSGT00940000164861 ENSGT00940000161036.B ENSGT00940000157042.c.a ENSGT00390000013726.c ENSGT00390000000134.a ENSGT00940000160608 ENSGT00390000013298 ENSGT00940000165757 ENSGT00510000049375 ENSGT00970000193827 ENSGT00730000112219 ENSGT00510000049872 ENSGT00390000010434.b ENSGT00950000182926.b.d.b #22 ENSGT00390000013106 ENSGT00940000157727.x.b ENSGT00890000139463.b.b.a Clupeocephala ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 406 SFR1 (ENSHCOG00000011490) itprip (ENSHCOG00000011493) GSTO1 (ENSHCOG00000011503) ENSHCOG00000011521 ENSHCOG00000011538 papss2a (ENSHCOG00000011564) papss2a (ENSHCOG00000011592) minpp1a (ENSHCOG00000011602) sgms1a (ENSHCOG00000011635) ENSHCOG00000011641 PRKG1 (ENSHCOG00000011653) prkg1a (ENSHCOG00000011692) dkk1a (ENSHCOG00000011699) pcdh15a (ENSHCOG00000012820) marveld1 (ENSHCOG00000012893) ENSHCOG00000012901 #22 Tiger tail seahorse MODERN SPECIES 751 ENSHCOG00000008992 #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Lyretail cichlid MODERN SPECIES 308 ENSNBRG00000024101 ENSNBRG00000024100 ENSNBRG00000024093 tekt4 (ENSNBRG00000024082) ENSNBRG00000024079 ENSNBRG00000024075 LOXL4 (ENSNBRG00000024068) ENSNBRG00000024064 crtac1a (ENSNBRG00000024060) golga7ba (ENSNBRG00000024056) zfyve27 (ENSNBRG00000024042) ENSNBRG00000024034 ENSNBRG00000024031 ENSNBRG00000024028 pi4k2a (ENSNBRG00000024021) ENSNBRG00000024018 #22 ENSNBRG00000024011 #22 exosc1 (ENSNBRG00000024007) ENSNBRG00000024005 gprc5bb (ENSNBRG00000024001) ENSNBRG00000023995 ENSNBRG00000023992 ENSNBRG00000023974 TSC2 (ENSNBRG00000023922) NTHL1 (ENSNBRG00000023880) ENSNBRG00000023866 TNPO2 (ENSNBRG00000023849) rln3b (ENSNBRG00000023834) RFX1 (ENSNBRG00000023821) DCAF15 (ENSNBRG00000023810) khsrp (ENSNBRG00000023797) Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Salmoninae ANCESTRAL SPECIES 172 ENSGT01070000253775.b.k ENSGT01100000263495.A.a.a ENSGT00940000156038.a.a.d.b.b.b.b ENSGT00940000156038.a.a.d.b.b.b.a.a.a.b ENSGT00940000157042.c.b ENSGT00530000063711.b ENSGT00390000013726.d ENSGT00390000000134.a.d.a ENSGT00390000013298 ENSGT00940000165757.d.n ENSGT01030000234958 ENSGT00390000010434.b.c.b ENSGT00940000166659 ENSGT00950000182926.b.d.a.a.a.a #22 ENSGT00390000015287.a.a ENSGT00950000182926.b.d.b #22 ENSGT00390000015287.b ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000167543 ENSGT00940000155366.b.a.b ENSGT00950000182894.B.i.a.b ENSGT00940000165523.a ENSGT00940000167012.d ENSGT00950000183139.C.i.b.a ENSGT00510000047513.h ENSGT00950000182849.B.c.a.a.c ENSGT00950000182849.B.c.a.a.d ENSGT00940000156708.a.a ENSGT00940000154396.b.a.a.b ENSGT01050000244879.a.b.f Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Salmo ANCESTRAL SPECIES 177 ENSGT00940000165757.d.m.a ENSGT01030000234958 ENSGT00390000010434.b.c.b ENSGT00940000166659.d ENSGT00950000182926.b.d.b #22 ENSGT00390000015287.b.e ENSGT00500000044955 ENSGT00950000182961.b.c ENSGT00940000155366.b.a.b.g ENSGT00950000182894.B.i.a.b ENSGT00940000165523.a ENSGT00940000167012.d ENSGT00950000183139.C.i.a.b ENSGT00940000167543 ENSGT00940000155366.b.a.b.h ENSGT00950000182894.B.i.b ENSGT00940000176048 ENSGT01090000260920.a Atlantic salmon MODERN SPECIES 3 ENSSSAG00000008452 ENSSSAG00000121010 ENSSSAG00000000931 LOXL4 (ENSSSAG00000000950) ENSSSAG00000103780 ENSSSAG00000097164 crtac1a (ENSSSAG00000000986) golga7ba (ENSSSAG00000001015) zfyve27 (ENSSSAG00000110795) ENSSSAG00000103473 ENSSSAG00000001055 ENSSSAG00000120539 ENSSSAG00000008247 pi4k2a (ENSSSAG00000008236) cdc25d (ENSSSAG00000008227) ENSSSAG00000099687 #22 exosc1 (ENSSSAG00000093562) ENSSSAG00000108874 gprc5bb (ENSSSAG00000038426) si:ch211-202h22.9 (ENSSSAG00000008178) ENSSSAG00000000516 ENSSSAG00000101938 ENSSSAG00000062557 tekt4 (ENSSSAG00000101639) ENSSSAG00000117368 tekt4 (ENSSSAG00000103017) ENSSSAG00000004221 ENSSSAG00000106567 ENSSSAG00000096854 NTHL1 (ENSSSAG00000097563) ENSSSAG00000083657 Otomorpha ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Otophysi ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000182926.b.d.b #22 Golden-line barbel MODERN SPECIES 4752 ENSSGRG00000004630 #22 Elephant shark MODERN SPECIES 1631 NHLRC2 (ENSCMIG00000010877) adrb1 (ENSCMIG00000010889) CCDC186 (ENSCMIG00000010895) ENSCMIG00000010902 ENSCMIG00000010904 VWA2 (ENSCMIG00000010908) AFAP1L2 (ENSCMIG00000010918) ubtd1b (ENSCMIG00000010921) mms19 (ENSCMIG00000010937) zdhhc16a (ENSCMIG00000010996) exosc1 (ENSCMIG00000011000) ENSCMIG00000011007 ENSCMIG00000011008 ENSCMIG00000011009 ENSCMIG00000011010 pgam1a (ENSCMIG00000011015) #22 hps1 (ENSCMIG00000011025) ENSCMIG00000011035 cox15 (ENSCMIG00000011044) cutc (ENSCMIG00000011058) ENSCMIG00000011106 ENSCMIG00000011182 cpn1 (ENSCMIG00000011192) KCNIP2 (ENSCMIG00000011199) lbx1b (ENSCMIG00000011205) HPS6 (ENSCMIG00000011210) ENSCMIG00000011217 ldb1a (ENSCMIG00000011249) Gnathostomata ANCESTRAL SPECIES 1741 ENSGT00940000161605 ENSGT00950000182926.b.c ##22 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1671 TCIRG1 (ENSCMIG00000010563) ENSCMIG00000010559 stambpa (ENSCMIG00000010558) ENSCMIG00000010556 dusp2 (ENSCMIG00000010553) ENSCMIG00000010552 ##22 stard7 (ENSCMIG00000010550) OGDH (ENSCMIG00000010470) ENSCMIG00000010460 ENSCMIG00000010459 ENSCMIG00000010458 tmem150aa (ENSCMIG00000010454) rnf181 (ENSCMIG00000010453) ENSCMIG00000010450 vamp8 (ENSCMIG00000010449) GGCX (ENSCMIG00000010446) usp39 (ENSCMIG00000010426) si:ch211-283h6.4 (ENSCMIG00000010415) mat2ab (ENSCMIG00000010351) ENSCMIG00000010326 ENSCMIG00000010321 Elephant shark MODERN SPECIES 1703 ENSCMIG00000013719 ENSCMIG00000013717 ENSCMIG00000013711 ENSCMIG00000013709 ENSCMIG00000013705 ENSCMIG00000013704 si:dkey-33c12.3 (ENSCMIG00000013703) ENSCMIG00000013697 hspa12b (ENSCMIG00000013691) tex261 (ENSCMIG00000013685) ENSCMIG00000013680 ENSCMIG00000013672 vax2 (ENSCMIG00000013668) ENSCMIG00000013663 cct7 (ENSCMIG00000013624) ENSCMIG00000013605 ##22 ENSCMIG00000013603 smyd5 (ENSCMIG00000013534) noto (ENSCMIG00000013510) emx1 (ENSCMIG00000013509) sfxn5b (ENSCMIG00000013500) ENSCMIG00000013492 ENSCMIG00000013488 ENSCMIG00000013487 SPR (ENSCMIG00000013482) Euteleostomi ANCESTRAL SPECIES 325 ENSGT00530000063255.C ENSGT00940000160571 ENSGT00520000055570.A.b ENSGT00940000161915 ENSGT00940000154856.A.a ENSGT00940000161605 ENSGT00950000182926.b.c ##22 ENSGT00940000164699 ENSGT00530000064712 ENSGT00940000157038 ENSGT00940000160915 ENSGT00940000156732 Actinopterygii ANCESTRAL SPECIES 504 ENSGT00950000182926.b.c ##22 ENSGT00940000156185 ENSGT00940000160058 ENSGT00390000006707 ENSGT00510000046985 ENSGT00390000011206.a Neopterygii ANCESTRAL SPECIES 97 ENSGT00390000003706.a.a ENSGT00940000165064 ENSGT00390000008694.b.b ENSGT00940000159105 ENSGT01030000234527.A.a.b.a.a ENSGT00390000013415.a.b ENSGT00950000182864.a.b.b.a.a ENSGT00940000154909.a ENSGT00940000154909.b ENSGT00940000166792 ENSGT00940000165076.b ENSGT00730000111146 ENSGT00940000157734 ENSGT00940000161685.A.a ENSGT00940000156208 ENSGT00950000182926.b.c ##22 ENSGT00940000156185 ENSGT00940000160058 ENSGT00390000006707 ENSGT00510000046985 ENSGT00390000011206.a Osteoglossocephalai ANCESTRAL SPECIES 194 ENSGT00950000182864.a.b.b.a.a ENSGT00390000013415.a.b.jb ENSGT00390000013415.a.b.ib ENSGT01030000234527.A.a.b.a.a ENSGT00940000159105 ENSGT00390000008694.b.b ENSGT00940000165064.a ENSGT01030000234522.C.d.b ENSGT00940000154909.a.b ENSGT00940000154909.b.a ENSGT00940000166792 ENSGT00940000165076.b ENSGT00730000111146 ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT00390000008529 ENSGT00940000164254 ENSGT00820000127055.b ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b Clupeocephala ANCESTRAL SPECIES 72 ENSGT00940000166638 ENSGT00390000010075 ENSGT00940000165107.A ENSGT00390000009130.b.d.b ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00730000111146 ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000169602 ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b ENSGT00940000173905 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664.c ENSGT00950000183160.B Euteleosteomorpha ANCESTRAL SPECIES 154 ENSGT00390000010075 ENSGT00940000165107.A ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00730000111146 ENSGT00940000161685.A.a ENSGT01100000265222 ENSGT00940000154418.a.b ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000169602 ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664.c Acanthomorphata ANCESTRAL SPECIES 189 ENSGT00950000182964.a.b.a.a.b.e ENSGT00950000182964.a.b.a.a.b.f ENSGT00940000166638 ENSGT00390000010075 ENSGT00940000165107.A ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664.c ENSGT00940000167368 ENSGT00820000127055.b ENSGT00940000164254.a.b Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00950000182964.a.b.a.a.b.e ENSGT00950000182964.a.b.a.a.b.f ENSGT00940000166638 ENSGT00390000010075 ENSGT00940000165107.A ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699 ENSGT00940000153892.B ENSGT00940000173905 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Pinecone sodierfish MODERN SPECIES 3 EFNA5 (ENSMMDG00005006136) GADD45G (ENSMMDG00005006135) gadd45gb.1 (ENSMMDG00005006133) ENSMMDG00005006099 ghrb (ENSMMDG00005006094) c7b (ENSMMDG00005005587) c6 (ENSMMDG00005004007) rgs7bpb (ENSMMDG00005003972) rnf180b (ENSMMDG00005003969) htr1ab (ENSMMDG00005003967) ndr1 (ENSMMDG00005003965) eif4ebp1 (ENSMMDG00005003962) ANK1 (ENSMMDG00005003757) nefma (ENSMMDG00005003722) neflb (ENSMMDG00005003706) pgam2 (ENSMMDG00005003704) ##22 ENSMMDG00005003701 ENSMMDG00005003698 MMP17 (ENSMMDG00005003692) ENSMMDG00005003690 crkl (ENSMMDG00005003686) si:ch211-222n4.2 (ENSMMDG00005003681) ULK1 (ENSMMDG00005003676) MMP17 (ENSMMDG00005003669) sfswap (ENSMMDG00005003659) ENSMMDG00005003646 ENSMMDG00005003640 TRABD2A (ENSMMDG00005003636) HOOK3 (ENSMMDG00005001350) rnf170 (ENSMMDG00005001186) gpn3 (ENSMMDG00005001169) Percomorphaceae ANCESTRAL SPECIES 16 ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000178030 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699 ENSGT00940000153892.B ENSGT00940000173905 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Tiger tail seahorse MODERN SPECIES 499 rasgef1bb (ENSHCOG00000004798) ENSHCOG00000004820 ENSHCOG00000004845 snx18b (ENSHCOG00000004851) ENSHCOG00000004868 dusp4 (ENSHCOG00000004893) ENSHCOG00000004945 cldn23.1 (ENSHCOG00000004952) ENSHCOG00000004973 ENSHCOG00000004981 ENSHCOG00000004993 eif4ebp1 (ENSHCOG00000004999) ANK1 (ENSHCOG00000000133) nefma (ENSHCOG00000005056) ENSHCOG00000005064 pgam2 (ENSHCOG00000005073) ##22 ENSHCOG00000005076 ENSHCOG00000005082 ENSHCOG00000005102 MMP17 (ENSHCOG00000005121) Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000178030 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Ovalentaria ANCESTRAL SPECIES 16 ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000178030.a ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000178030.a ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b.c ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b ENSGT00940000166762 Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000178030.a ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000156024.i.a.f ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b.c ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000156024.i.a.f ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b Mangrove rivulus MODERN SPECIES 16 rasgef1bb (ENSKMAG00000014414) antxr2b (ENSKMAG00000014384) paqr3b (ENSKMAG00000014357) slc26a1 (ENSKMAG00000014321) ENSKMAG00000014282 dusp4 (ENSKMAG00000014251) ENSKMAG00000014133 cldn23.1 (ENSKMAG00000014078) ENSKMAG00000013925 ENSKMAG00000013883 ndr1 (ENSKMAG00000013866) eif4ebp1 (ENSKMAG00000013857) ANK1 (ENSKMAG00000013580) nefma (ENSKMAG00000013463) neflb (ENSKMAG00000013417) pgam2 (ENSKMAG00000013402) ##22 ENSKMAG00000013386 ENSKMAG00000013343 MMP17 (ENSKMAG00000013317) ENSKMAG00000013289 crkl (ENSKMAG00000013269) ULK1 (ENSKMAG00000013221) MMP17 (ENSKMAG00000013191) sfswap (ENSKMAG00000013168) TRABD2A (ENSKMAG00000013149) HOOK3 (ENSKMAG00000013042) rnf170 (ENSKMAG00000012997) gpn3 (ENSKMAG00000012957) arpc3 (ENSKMAG00000012918) TMEM132C (ENSKMAG00000012889) ENSKMAG00000012863 Turquoise killifish MODERN SPECIES 1611 SLC26A1 (ENSNFUG00015021420) ENSNFUG00015021423 ENSNFUG00015021425 DUSP4 (ENSNFUG00015021429) ENSNFUG00015021453 ENSNFUG00015008934 ENSNFUG00015008943 ENSNFUG00015008963 cldn23.1 (ENSNFUG00015008975) ENSNFUG00015009057 ndr1 (ENSNFUG00015009245) EIF4EBP1 (ENSNFUG00015009271) ANK1 (ENSNFUG00015009423) nefma (ENSNFUG00015009773) neflb (ENSNFUG00015009789) pgam2 (ENSNFUG00015009807) ##22 ENSNFUG00015009818 MMP17A (ENSNFUG00015009838) TBX16 (ENSNFUG00015009850) crkl (ENSNFUG00015009859) si:ch211-222n4.2 (ENSNFUG00015009865) ULK1B (ENSNFUG00015009934) MMP17 (ENSNFUG00015010708) sfswap (ENSNFUG00015010736) ENSNFUG00015010767 TRABD2A (ENSNFUG00015010773) ENSNFUG00015010781 HOOK3 (ENSNFUG00015010832) RNF170 (ENSNFUG00015011225) GPN3 (ENSNFUG00015011233) ARPC3 (ENSNFUG00015011245) Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000156024.i.a.f ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b.c ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b Poeciliinae ANCESTRAL SPECIES 12 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000156664.c ENSGT00940000158699.q.b.c ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a Poecilia ANCESTRAL SPECIES 12 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000156664.c ENSGT00940000158699.q.b.c ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a Guppy MODERN SPECIES 442 paqr3b (ENSPREG00000005732) slc26a1 (ENSPREG00000005774) ENSPREG00000005822 ENSPREG00000005848 dusp4 (ENSPREG00000005876) ENSPREG00000005920 cldn23.1 (ENSPREG00000006047) ENSPREG00000006089 ENSPREG00000006222 ENSPREG00000006313 eif4ebp1 (ENSPREG00000006324) ANK1 (ENSPREG00000006344) nefma (ENSPREG00000006401) neflb (ENSPREG00000006406) ENSPREG00000006430 pgam2 (ENSPREG00000006497) ##22 MMP17 (ENSPREG00000006526) ENSPREG00000006558 crkl (ENSPREG00000006578) ULK1 (ENSPREG00000006613) MMP17 (ENSPREG00000006640) sfswap (ENSPREG00000006692) TRABD2A (ENSPREG00000006752) ENSPREG00000006761 HOOK3 (ENSPREG00000006820) rnf170 (ENSPREG00000006963) gpn3 (ENSPREG00000006986) arpc3 (ENSPREG00000007014) TMEM132C (ENSPREG00000007031) ENSPREG00000007087 RIMBP2 (ENSPREG00000007113) NAME_6 ANCESTRAL SPECIES 130 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b Amazon molly DUPLICATION Amazon molly MODERN SPECIES 396 paqr3b (ENSPFOG00000004513) slc26a1 (ENSPFOG00000004575) ENSPFOG00000004769 ENSPFOG00000023568 dusp4 (ENSPFOG00000004804) ENSPFOG00000004982 cldn23.1 (ENSPFOG00000020334) ENSPFOG00000020335 ENSPFOG00000005920 ENSPFOG00000006003 ndr1 (ENSPFOG00000006036) eif4ebp1 (ENSPFOG00000006081) ANK1 (ENSPFOG00000006144) nefma (ENSPFOG00000007247) neflb (ENSPFOG00000007321) pgam2 (ENSPFOG00000007353) ##22 pgam2 (ENSPFOG00000007376) ##22 ENSPFOG00000007404 ENSPFOG00000007579 Amazon molly MODERN SPECIES 396 slc26a1 (ENSPFOG00000004575) ENSPFOG00000004769 ENSPFOG00000023568 dusp4 (ENSPFOG00000004804) ENSPFOG00000004982 cldn23.1 (ENSPFOG00000020334) ENSPFOG00000020335 ENSPFOG00000005920 ENSPFOG00000006003 ndr1 (ENSPFOG00000006036) eif4ebp1 (ENSPFOG00000006081) ANK1 (ENSPFOG00000006144) nefma (ENSPFOG00000007247) neflb (ENSPFOG00000007321) pgam2 (ENSPFOG00000007353) ##22 pgam2 (ENSPFOG00000007376) ##22 ENSPFOG00000007404 ENSPFOG00000007579 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 522 dusp4 (ENSPLAG00000004381) ENSPLAG00000004341 cldn23.1 (ENSPLAG00000004273) ENSPLAG00000004260 ENSPLAG00000004243 ENSPLAG00000004217 ENSPLAG00000004204 eif4ebp1 (ENSPLAG00000004199) ANK1 (ENSPLAG00000004182) nefma (ENSPLAG00000004120) ENSPLAG00000004004 pgam2 (ENSPLAG00000003909) ##22 ENSPLAG00000003904 Sailfin molly MODERN SPECIES 1067 pgam2 (ENSPLAG00000019725) ##22 ENSPLAG00000019706 MMP17 (ENSPLAG00000019695) ENSPLAG00000019656 Platyfish MODERN SPECIES 22 antxr2b (ENSXMAG00000002277) paqr3b (ENSXMAG00000002288) slc26a1 (ENSXMAG00000002291) ENSXMAG00000002301 ENSXMAG00000022408 dusp4 (ENSXMAG00000021873) ENSXMAG00000002312 cldn23.1 (ENSXMAG00000020077) ENSXMAG00000002338 ENSXMAG00000023414 ENSXMAG00000027715 eif4ebp1 (ENSXMAG00000025049) ANK1 (ENSXMAG00000002364) nefma (ENSXMAG00000025159) neflb (ENSXMAG00000002416) pgam2 (ENSXMAG00000021805) ##22 ENSXMAG00000026112 MMP17 (ENSXMAG00000002441) ENSXMAG00000027166 crkl (ENSXMAG00000026069) ENSXMAG00000029005 ULK1 (ENSXMAG00000002466) MMP17 (ENSXMAG00000023131) sfswap (ENSXMAG00000009020) TRABD2A (ENSXMAG00000009059) HOOK3 (ENSXMAG00000009065) rnf170 (ENSXMAG00000009097) gpn3 (ENSXMAG00000009108) ENSXMAG00000024599 arpc3 (ENSXMAG00000027458) ENSXMAG00000019766 NAME_4 ANCESTRAL SPECIES ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000156024.i.a.f ENSGT00940000158699.q.b.d ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b.c ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b Sheepshead minnow MODERN SPECIES 430 ENSCVAG00000000339 cldn23.1 (ENSCVAG00000013009) ENSCVAG00000012996 ENSCVAG00000012932 ndr1 (ENSCVAG00000012913) eif4ebp1 (ENSCVAG00000012901) ANK1 (ENSCVAG00000012895) nefma (ENSCVAG00000012810) neflb (ENSCVAG00000012802) pgam2 (ENSCVAG00000012785) ##22 stx2a (ENSCVAG00000012771) ENSCVAG00000012753 MMP17 (ENSCVAG00000012739) ENSCVAG00000012690 crkl (ENSCVAG00000012676) si:ch211-222n4.2 (ENSCVAG00000012655) ULK1 (ENSCVAG00000012632) MMP17 (ENSCVAG00000012610) Mummichog MODERN SPECIES 2264 slc26a1 (ENSFHEG00000012239) ENSFHEG00000012187 ENSFHEG00000012142 dusp4 (ENSFHEG00000012073) ENSFHEG00000012036 cldn23.1 (ENSFHEG00000011895) ENSFHEG00000011883 ENSFHEG00000011812 ENSFHEG00000011786 ENSFHEG00000011766 ENSFHEG00000011753 eif4ebp1 (ENSFHEG00000011737) ANK1 (ENSFHEG00000011687) nefma (ENSFHEG00000011564) neflb (ENSFHEG00000011439) pgam2 (ENSFHEG00000011366) ##22 ENSFHEG00000011400 ENSFHEG00000011343 MMP17 (ENSFHEG00000011329) ENSFHEG00000011291 crkl (ENSFHEG00000011272) si:ch211-222n4.2 (ENSFHEG00000011257) ULK1 (ENSFHEG00000011250) MMP17 (ENSFHEG00000011185) sfswap (ENSFHEG00000011149) ENSFHEG00000011127 TRABD2A (ENSFHEG00000011113) HOOK3 (ENSFHEG00000011102) Oryzias ANCESTRAL SPECIES 9 ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.c.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b.c.b ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b ENSGT00940000166762 Oryzias_b ANCESTRAL SPECIES 4 ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.c.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.b.c.b ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b ENSGT00940000166762 Javanese ricefish MODERN SPECIES 3 rasgef1bb (ENSOJAG00000008917) antxr2b (ENSOJAG00000010430) paqr3b (ENSOJAG00000010452) slc26a1 (ENSOJAG00000010462) ENSOJAG00000010480 ENSOJAG00000010493 dusp4 (ENSOJAG00000010517) ENSOJAG00000010753 cldn23.1 (ENSOJAG00000013055) ENSOJAG00000013167 ENSOJAG00000013184 ENSOJAG00000013193 ANK1 (ENSOJAG00000013219) nefma (ENSOJAG00000014598) neflb (ENSOJAG00000014675) pgam2 (ENSOJAG00000014687) ##22 ENSOJAG00000014713 MMP17 (ENSOJAG00000014749) ENSOJAG00000014823 crkl (ENSOJAG00000014832) MMP17 (ENSOJAG00000014864) sfswap (ENSOJAG00000014952) TRABD2A (ENSOJAG00000014991) HOOK3 (ENSOJAG00000015083) rnf170 (ENSOJAG00000015515) gpn3 (ENSOJAG00000015529) arpc3 (ENSOJAG00000015547) ENSOJAG00000015578 TMEM132C (ENSOJAG00000015619) ENSOJAG00000015827 RIMBP2 (ENSOJAG00000015873) Indian medaka MODERN SPECIES 30 paqr3b (ENSOMEG00000021444) slc26a1 (ENSOMEG00000021472) ENSOMEG00000021505 ENSOMEG00000000984 dusp4 (ENSOMEG00000021565) ENSOMEG00000021619 cldn23.1 (ENSOMEG00000021639) ENSOMEG00000021669 ENSOMEG00000021690 ENSOMEG00000021710 ENSOMEG00000021722 eif4ebp1 (ENSOMEG00000021742) ENSOMEG00000021750 ANK1 (ENSOMEG00000021775) nefma (ENSOMEG00000021807) pgam2 (ENSOMEG00000021829) ##22 MMP17 (ENSOMEG00000021887) ENSOMEG00000021910 crkl (ENSOMEG00000021933) ENSOMEG00000021949 ULK1 (ENSOMEG00000021995) MMP17 (ENSOMEG00000022028) sfswap (ENSOMEG00000022065) trabd2a (ENSOMEG00000022082) ENSOMEG00000022088 HOOK3 (ENSOMEG00000022217) rnf170 (ENSOMEG00000022333) gpn3 (ENSOMEG00000022391) arpc3 (ENSOMEG00000022426) TMEM132C (ENSOMEG00000022451) ENSOMEG00000022470 Oryzias_a ANCESTRAL SPECIES 12 ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.c.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000158075 ENSGT00940000156024.i.a.f ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a Japanese Medaka HdrR MODERN SPECIES 3 ENSORLG00000011341 ENSORLG00000022643 cldn23.1 (ENSORLG00000011288) ENSORLG00000024668 ENSORLG00000011280 ENSORLG00000023124 ENSORLG00000025785 ENSORLG00000028190 ENSORLG00000023779 ENSORLG00000019945 ENSORLG00000026718 ENSORLG00000011244 ENSORLG00000027528 nefma (ENSORLG00000011207) neflb (ENSORLG00000011182) pgam2 (ENSORLG00000011149) ##22 ENSORLG00000011130 ENSORLG00000021946 ENSORLG00000011001 ENSORLG00000023408 crkl (ENSORLG00000011093) ENSORLG00000026074 ULK1 (ENSORLG00000011071) ENSORLG00000028766 sfswap (ENSORLG00000010983) trabd2a (ENSORLG00000026885) HOOK3 (ENSORLG00000010949) ENSORLG00000028328 ENSORLG00000023540 rnf170 (ENSORLG00000010897) gpn3 (ENSORLG00000010884) Chinese medaka MODERN SPECIES 1147 ANK1 (ENSOSIG00000021364) nefma (ENSOSIG00000022894) neflb (ENSOSIG00000022898) pgam2 (ENSOSIG00000022906) ##22 stx2a (ENSOSIG00000022910) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000173905 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a Pomacentridae ANCESTRAL SPECIES 44 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030.b ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.a ENSGT00940000164254.a.b Pomacentridae_A ANCESTRAL SPECIES 86 ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030.b ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.a ENSGT00940000164254.a.b Amphiprion ANCESTRAL SPECIES 127 ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030.b ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b.a ENSGT00940000164254.a.b Clown anemonefish MODERN SPECIES 607 cldn23.1 (ENSAOCG00000017929) ENSAOCG00000018001 ENSAOCG00000018014 ENSAOCG00000018021 eif4ebp1 (ENSAOCG00000001279) ANK1 (ENSAOCG00000018157) nefma (ENSAOCG00000001297) neflb (ENSAOCG00000018195) pgam2 (ENSAOCG00000018211) ##22 STX2 (ENSAOCG00000018220) Orange clownfish MODERN SPECIES 7 ENSAPEG00000002881 paqr3b (ENSAPEG00000002831) slc26a1 (ENSAPEG00000002819) ENSAPEG00000002757 ENSAPEG00000002720 ENSAPEG00000002695 dusp4 (ENSAPEG00000002683) ENSAPEG00000002584 cldn23.1 (ENSAPEG00000002542) ENSAPEG00000002120 ENSAPEG00000002083 eif4ebp1 (ENSAPEG00000002059) ANK1 (ENSAPEG00000001924) nefma (ENSAPEG00000001916) neflb (ENSAPEG00000001897) pgam2 (ENSAPEG00000001880) ##22 ENSAPEG00000001870 MMP17 (ENSAPEG00000001832) ENSAPEG00000001739 Spiny chromis MODERN SPECIES 606 snap25a (ENSAPOG00000017456) sccpdhb (ENSAPOG00000017439) cnstb (ENSAPOG00000017427) ENSAPOG00000017413 hnrnpub (ENSAPOG00000017400) lft1 (ENSAPOG00000017349) ENSAPOG00000000468 nefma (ENSAPOG00000017321) neflb (ENSAPOG00000017313) pgam2 (ENSAPOG00000017307) ##22 ENSAPOG00000017287 Bicolor damselfish MODERN SPECIES 504 ENSSPAG00000001035 cldn23.1 (ENSSPAG00000001151) ENSSPAG00000001164 ENSSPAG00000001182 ENSSPAG00000001198 ENSSPAG00000001219 ENSSPAG00000001241 eif4ebp1 (ENSSPAG00000001256) ANK1 (ENSSPAG00000001274) ENSSPAG00000001391 nefma (ENSSPAG00000001418) neflb (ENSSPAG00000001497) pgam2 (ENSSPAG00000001517) ##22 ENSSPAG00000001534 MMP17 (ENSSPAG00000001562) ENSSPAG00000001605 Cichlidae ANCESTRAL SPECIES 10 ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000162544.d ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000173905 ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000157920.b ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543.b ENSGT00940000154687.B.q.a ENSGT00940000154130.a.b.e ENSGT00390000005101 ENSGT01030000234558.D.a ENSGT00940000157589 ENSGT00940000166736 ENSGT00530000063085.B Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000178723 ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000157920.b ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543.b ENSGT00940000154687.B.q.a ENSGT00940000154130.a.b.e ENSGT00390000005101 ENSGT01030000234558.D.a ENSGT00940000157589 ENSGT00940000166736 ENSGT00530000063085.B Haplochromini ANCESTRAL SPECIES ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000178723 ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000157920.b ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543.b ENSGT00940000154687.B.q.a ENSGT00940000154130.a.b.e ENSGT00390000005101 ENSGT01030000234558.D.a ENSGT00940000157589 ENSGT00530000063085.B ENSGT00940000159387.f Burton s mouthbrooder MODERN SPECIES 405 paqr3b (ENSHBUG00000023053) slc26a1 (ENSHBUG00000023105) ENSHBUG00000023145 ENSHBUG00000023166 dusp4 (ENSHBUG00000023178) ENSHBUG00000023389 cldn23.1 (ENSHBUG00000023433) ENSHBUG00000023458 ENSHBUG00000023476 ENSHBUG00000023489 ndr1 (ENSHBUG00000000716) eif4ebp1 (ENSHBUG00000023513) ANK1 (ENSHBUG00000023656) nefma (ENSHBUG00000023788) neflb (ENSHBUG00000023803) pgam2 (ENSHBUG00000023816) ##22 ENSHBUG00000023822 MMP17 (ENSHBUG00000003869) rln1 (ENSHBUG00000003877) jak2a (ENSHBUG00000003937) ENSHBUG00000003956 RC3H2 (ENSHBUG00000003976) GPR21 (ENSHBUG00000003995) RABGAP1 (ENSHBUG00000004280) STRBP (ENSHBUG00000004384) Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178723 ENSGT00940000181550 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000157920.b ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543.b ENSGT00940000154687.B.q.a ENSGT00940000154130.a.b.e ENSGT00390000005101 ENSGT01030000234558.D.a ENSGT00940000157589 ENSGT00530000063085.B ENSGT00940000159387.f P. nyererei MODERN SPECIES 327 ENSPNYG00000011233 ENSPNYG00000011253 dusp4 (ENSPNYG00000011292) ENSPNYG00000011308 cldn23.1 (ENSPNYG00000011364) ENSPNYG00000011415 ENSPNYG00000011584 ENSPNYG00000011596 ENSPNYG00000011617 ENSPNYG00000011630 eif4ebp1 (ENSPNYG00000011640) ANK1 (ENSPNYG00000011659) ENSPNYG00000011726 nefma (ENSPNYG00000011781) neflb (ENSPNYG00000011855) pgam2 (ENSPNYG00000011876) ##22 ENSPNYG00000011898 ENSPNYG00000011911 MMP17 (ENSPNYG00000011926) rln1 (ENSPNYG00000011951) jak2a (ENSPNYG00000011975) ENSPNYG00000012034 RC3H2 (ENSPNYG00000012063) RABGAP1 (ENSPNYG00000012166) GPR21 (ENSPNYG00000012294) STRBP (ENSPNYG00000012317) SH2D3C (ENSPNYG00000012381) ENSPNYG00000012429 urm1 (ENSPNYG00000012446) CERCAM (ENSPNYG00000012488) sardh (ENSPNYG00000012545) Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000154396.a ENSGT00940000155640.b ENSGT00940000157920.b ENSGT00940000157685 ENSGT00940000157216 ENSGT00940000163543.b ENSGT00940000154687.B.q.a ENSGT00940000154130.a.b.e ENSGT00390000005101 ENSGT01030000234558.D.a ENSGT00940000157589 ENSGT00530000063085.B ENSGT00940000159387.f Zebra mbuna MODERN SPECIES 1110 paqr3b (ENSMZEG00005016683) slc26a1 (ENSMZEG00005016692) ENSMZEG00005016707 ENSMZEG00005016712 dusp4 (ENSMZEG00005016720) ENSMZEG00005016736 cldn23.1 (ENSMZEG00005016795) ENSMZEG00005016839 ENSMZEG00005016872 ENSMZEG00005016874 ENSMZEG00005016886 eif4ebp1 (ENSMZEG00005016890) ANK1 (ENSMZEG00005016895) nefma (ENSMZEG00005016914) neflb (ENSMZEG00005016919) pgam2 (ENSMZEG00005016923) ##22 ENSMZEG00005016933 ENSMZEG00005016937 MMP17 (ENSMZEG00005016954) ENSMZEG00005016978 jak2a (ENSMZEG00005016984) ENSMZEG00005017007 ENSMZEG00005017012 RC3H2 (ENSMZEG00005017019) RABGAP1 (ENSMZEG00005017064) GPR21 (ENSMZEG00005017141) STRBP (ENSMZEG00005017152) SH2D3C (ENSMZEG00005017175) urm1 (ENSMZEG00005017191) CERCAM (ENSMZEG00005017205) sardh (ENSMZEG00005017212) Eastern happy MODERN SPECIES 19 paqr3b (ENSACLG00000024363) slc26a1 (ENSACLG00000024164) ENSACLG00000024154 ENSACLG00000024141 dusp4 (ENSACLG00000024134) ENSACLG00000024068 cldn23.1 (ENSACLG00000023958) ENSACLG00000023692 ENSACLG00000023660 ENSACLG00000023648 ndr1 (ENSACLG00000023643) eif4ebp1 (ENSACLG00000023638) ANK1 (ENSACLG00000023453) nefma (ENSACLG00000023422) neflb (ENSACLG00000023415) pgam2 (ENSACLG00000023406) ##22 ENSACLG00000023400 ENSACLG00000023355 ENSACLG00000023350 ENSACLG00000023342 MMP17 (ENSACLG00000023299) rln1 (ENSACLG00000023223) jak2a (ENSACLG00000023172) ENSACLG00000023156 RC3H2 (ENSACLG00000023136) GPR21 (ENSACLG00000023129) RABGAP1 (ENSACLG00000022769) STRBP (ENSACLG00000022623) ENSACLG00000022603 SH2D3C (ENSACLG00000022506) urm1 (ENSACLG00000022484) Lyretail cichlid MODERN SPECIES 328 paqr3b (ENSNBRG00000010143) slc26a1 (ENSNBRG00000010013) ENSNBRG00000009976 ENSNBRG00000009941 dusp4 (ENSNBRG00000009930) ENSNBRG00000009869 ENSNBRG00000009850 cldn23.1 (ENSNBRG00000009840) ENSNBRG00000009700 ENSNBRG00000009654 ENSNBRG00000009644 eif4ebp1 (ENSNBRG00000009633) ANK1 (ENSNBRG00000009558) nefma (ENSNBRG00000009534) neflb (ENSNBRG00000009521) pgam2 (ENSNBRG00000009501) ##22 ENSNBRG00000009486 ENSNBRG00000009476 MMP17 (ENSNBRG00000009451) rln1 (ENSNBRG00000009431) jak2a (ENSNBRG00000009344) ENSNBRG00000009318 RC3H2 (ENSNBRG00000009276) GPR21 (ENSNBRG00000009242) RABGAP1 (ENSNBRG00000009158) STRBP (ENSNBRG00000009092) SH2D3C (ENSNBRG00000009032) urm1 (ENSNBRG00000009012) CERCAM (ENSNBRG00000008921) Nile tilapia MODERN SPECIES 19 snx18b (ENSONIG00000004080) ENSONIG00000004075 rasgef1bb (ENSONIG00000004068) antxr2b (ENSONIG00000004061) paqr3b (ENSONIG00000030068) slc26a1 (ENSONIG00000004047) dusp4 (ENSONIG00000041169) ENSONIG00000004019 cldn23.1 (ENSONIG00000020635) ENSONIG00000004014 ndr1 (ENSONIG00000004012) eif4ebp1 (ENSONIG00000035373) ANK1 (ENSONIG00000003990) nefma (ENSONIG00000003986) neflb (ENSONIG00000003981) pgam2 (ENSONIG00000003979) ##22 STX2 (ENSONIG00000043217) ENSONIG00000032869 ENSONIG00000040512 ENSONIG00000032559 MMP17 (ENSONIG00000003963) ENSONIG00000003962 jak2a (ENSONIG00000003957) ENSONIG00000031422 RC3H2 (ENSONIG00000003945) RABGAP1 (ENSONIG00000003929) STRBP (ENSONIG00000003920) SH2D3C (ENSONIG00000003912) urm1 (ENSONIG00000003910) CERCAM (ENSONIG00000003905) sardh (ENSONIG00000003900) Midas cichlid MODERN SPECIES 110 ENSACIG00000008519 ENSACIG00000008534 cldn23.1 (ENSACIG00000008551) ENSACIG00000008568 ENSACIG00000008659 ENSACIG00000008674 eif4ebp1 (ENSACIG00000008686) ANK1 (ENSACIG00000008764) ENSACIG00000008836 nefma (ENSACIG00000008855) neflb (ENSACIG00000008909) pgam2 (ENSACIG00000008930) ##22 ENSACIG00000009069 MMP17 (ENSACIG00000009078) ENSACIG00000009104 crkl (ENSACIG00000009121) si:ch211-222n4.2 (ENSACIG00000009131) ULK1 (ENSACIG00000009165) MMP17 (ENSACIG00000009215) ENSACIG00000009240 Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030 ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b ENSGT00940000166762 Tetraodontidae ANCESTRAL SPECIES 205 ENSGT00940000161685.A.a ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00820000127055.b ENSGT00940000156664.c ENSGT00940000153892.B Fugu MODERN SPECIES 18 ENSTRUG00000028280 ENSTRUG00000024441 ENSTRUG00000030365 galt (ENSTRUG00000016445) sigmar1 (ENSTRUG00000024592) ier3ip1 (ENSTRUG00000001826) skor2 (ENSTRUG00000027386) ENSTRUG00000031343 ENSTRUG00000028660 ENSTRUG00000015690 ENSTRUG00000027956 ENSTRUG00000032728 ENSTRUG00000000842 clic3 (ENSTRUG00000000860) nefma (ENSTRUG00000001267) pgam2 (ENSTRUG00000009333) ##22 ENSTRUG00000009162 MMP17 (ENSTRUG00000028124) crkl (ENSTRUG00000003912) ULK1 (ENSTRUG00000030331) sfswap (ENSTRUG00000028452) pus1 (ENSTRUG00000002198) noc4l (ENSTRUG00000002312) ENSTRUG00000026745 RIMBP2 (ENSTRUG00000028382) ENSTRUG00000028582 ENSTRUG00000031605 TMEM132C (ENSTRUG00000030774) ENSTRUG00000032674 ube2g1b (ENSTRUG00000000955) arpc3 (ENSTRUG00000000904) Tetraodon MODERN SPECIES 26 cldn10a (ENSTNIG00000006119) ENSTNIG00000006120 chia.1 (ENSTNIG00000000017) chia.3 (ENSTNIG00000006123) cntn2 (ENSTNIG00000006124) nfasca (ENSTNIG00000006125) sacm1la (ENSTNIG00000006128) trnau1apa (ENSTNIG00000006129) tspan12 (ENSTNIG00000006146) tspan12 (ENSTNIG00000000260) ENSTNIG00000006147 ENSTNIG00000000192 FLNC (ENSTNIG00000006148) ENSTNIG00000006149 nefma (ENSTNIG00000006150) pgam2 (ENSTNIG00000006151) ##22 ENSTNIG00000000082 MMP17 (ENSTNIG00000006152) crkl (ENSTNIG00000006153) ULK1 (ENSTNIG00000006154) MMP17 (ENSTNIG00000006155) ENSTNIG00000006156 TAAR1 (ENSTNIG00000001471) TAAR1 (ENSTNIG00000000218) TAAR1 (ENSTNIG00000005193) TAAR1 (ENSTNIG00000001226) ENSTNIG00000006197 ENSTNIG00000006198 ENSTNIG00000006199 galcb (ENSTNIG00000006200) ENSTNIG00000006209 Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030 ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.a.i.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 216 pgam2 (ENSLBEG00000009884) ##22 ENSLBEG00000009862 MMP17 (ENSLBEG00000009906) ENSLBEG00000009947 crkl (ENSLBEG00000009981) si:ch211-222n4.2 (ENSLBEG00000010013) ULK1 (ENSLBEG00000010033) MMP17 (ENSLBEG00000010094) sfswap (ENSLBEG00000010239) TRABD2A (ENSLBEG00000010270) HOOK3 (ENSLBEG00000010367) rnf170 (ENSLBEG00000010554) gpn3 (ENSLBEG00000010593) arpc3 (ENSLBEG00000010653) ube2g1b (ENSLBEG00000010678) Ballan wrasse MODERN SPECIES 1018 nefma (ENSLBEG00000006701) neflb (ENSLBEG00000006718) pgam2 (ENSLBEG00000006783) ##22 ENSLBEG00000006764 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178030 ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.a.i.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Perciformes ANCESTRAL SPECIES 16 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b ENSGT00940000166762 Cottioidei ANCESTRAL SPECIES 18 ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00610000087482 ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b ENSGT00940000166762 Lumpfish MODERN SPECIES 3 ENSCLMG00005005041 pip5k1ba (ENSCLMG00005005037) tjp2a (ENSCLMG00005004443) ENSCLMG00005004278 MAMDC2 (ENSCLMG00005021595) slc30a5 (ENSCLMG00005021579) ANXA1 (ENSCLMG00005021578) ENSCLMG00005021577 TMC2 (ENSCLMG00005021576) ENSCLMG00005021574 ENSCLMG00005021573 eif4ebp1 (ENSCLMG00005021572) ANK1 (ENSCLMG00005021571) nefma (ENSCLMG00005021547) neflb (ENSCLMG00005021541) pgam2 (ENSCLMG00005021539) ##22 ENSCLMG00005021538 MMP17 (ENSCLMG00005021537) ENSCLMG00005021535 crkl (ENSCLMG00005021534) si:ch211-222n4.2 (ENSCLMG00005021533) ULK1 (ENSCLMG00005021531) ENSCLMG00005021529 MMP17 (ENSCLMG00005021528) sfswap (ENSCLMG00005021527) TRABD2A (ENSCLMG00005021526) HOOK3 (ENSCLMG00005021503) rnf170 (ENSCLMG00005021497) gpn3 (ENSCLMG00005021496) arpc3 (ENSCLMG00005021495) ube2g1b (ENSCLMG00005021494) Stickleback MODERN SPECIES 13 slc26a1 (ENSGACG00000017745) ENSGACG00000017742 dusp4 (ENSGACG00000017739) ENSGACG00000017729 cldn23.1 (ENSGACG00000017727) ENSGACG00000017725 ENSGACG00000017722 ENSGACG00000017721 ENSGACG00000017714 ndr1 (ENSGACG00000017712) ENSGACG00000017711 ENSGACG00000017709 ANK1 (ENSGACG00000017699) nefma (ENSGACG00000017695) neflb (ENSGACG00000017687) pgam2 (ENSGACG00000017684) ##22 ENSGACG00000017680 MMP17 (ENSGACG00000017673) crkl (ENSGACG00000017670) ENSGACG00000017668 ULK1 (ENSGACG00000017660) MMP17 (ENSGACG00000017659) sfswap (ENSGACG00000017647) HOOK3 (ENSGACG00000017640) rnf170 (ENSGACG00000017624) gpn3 (ENSGACG00000017617) arpc3 (ENSGACG00000017611) ube2g1b (ENSGACG00000017602) TMEM132C (ENSGACG00000017598) ENSGACG00000017593 RIMBP2 (ENSGACG00000017586) Perciformes_a ANCESTRAL SPECIES 12 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b ENSGT00940000166762 Pike perch MODERN SPECIES 145 rasgef1bb (ENSSLUG00000003530) antxr2b (ENSSLUG00000003857) paqr3b (ENSSLUG00000003885) slc26a1 (ENSSLUG00000003906) ENSSLUG00000004031 ENSSLUG00000004036 dusp4 (ENSSLUG00000004043) ENSSLUG00000004193 cldn23.1 (ENSSLUG00000006666) ENSSLUG00000006690 ENSSLUG00000006728 eif4ebp1 (ENSSLUG00000006736) ANK1 (ENSSLUG00000006887) nefma (ENSSLUG00000009688) neflb (ENSSLUG00000009691) pgam2 (ENSSLUG00000009693) ##22 stx2a (ENSSLUG00000009697) ENSSLUG00000009701 MMP17 (ENSSLUG00000009705) ENSSLUG00000009710 crkl (ENSSLUG00000009712) si:ch211-222n4.2 (ENSSLUG00000009714) ULK1 (ENSSLUG00000009718) MMP17 (ENSSLUG00000009735) ENSSLUG00000009757 sfswap (ENSSLUG00000009762) Channel bull blenny MODERN SPECIES 3 slc26a1 (ENSCGOG00000011761) ENSCGOG00000011845 ENSCGOG00000011846 dusp4 (ENSCGOG00000011850) ENSCGOG00000011930 cldn23.1 (ENSCGOG00000014323) ENSCGOG00000014325 ENSCGOG00000014329 ENSCGOG00000014333 ENSCGOG00000014335 ENSCGOG00000014336 eif4ebp1 (ENSCGOG00000014340) ANK1 (ENSCGOG00000014403) nefma (ENSCGOG00000015241) neflb (ENSCGOG00000015243) pgam2 (ENSCGOG00000015244) ##22 ENSCGOG00000015246 ENSCGOG00000015248 MMP17 (ENSCGOG00000015249) ENSCGOG00000015250 crkl (ENSCGOG00000015252) si:ch211-222n4.2 (ENSCGOG00000015255) ULK1 (ENSCGOG00000015261) MMP17 (ENSCGOG00000015532) sfswap (ENSCGOG00000015556) TRABD2A (ENSCGOG00000015571) HOOK3 (ENSCGOG00000015589) rnf170 (ENSCGOG00000016331) gpn3 (ENSCGOG00000016337) arpc3 (ENSCGOG00000016368) ube2g1b (ENSCGOG00000016397) Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.a.i.a ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Gilthead seabream MODERN SPECIES 3 rasgef1bb (ENSSAUG00010014513) antxr2b (ENSSAUG00010016352) paqr3b (ENSSAUG00010016364) slc26a1 (ENSSAUG00010016365) ENSSAUG00010016368 ENSSAUG00010016369 dusp4 (ENSSAUG00010016370) ENSSAUG00010016440 cldn23.1 (ENSSAUG00010019162) ENSSAUG00010019169 ENSSAUG00010019172 eif4ebp1 (ENSSAUG00010019173) ANK1 (ENSSAUG00010019186) nefma (ENSSAUG00010019254) neflb (ENSSAUG00010019256) pgam2 (ENSSAUG00010019257) ##22 ENSSAUG00010019258 MMP17 (ENSSAUG00010019260) crkl (ENSSAUG00010019265) si:ch211-222n4.2 (ENSSAUG00010019266) ULK1 (ENSSAUG00010019274) MMP17 (ENSSAUG00010019909) sfswap (ENSSAUG00010019918) TRABD2A (ENSSAUG00010019922) HOOK3 (ENSSAUG00010019932) rnf170 (ENSSAUG00010020081) gpn3 (ENSSAUG00010020092) arpc3 (ENSSAUG00010020099) ube2g1b (ENSSAUG00010020110) TMEM132C (ENSSAUG00010001346) ENSSAUG00010001378 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a.j ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b ENSGT00940000166762 European seabass MODERN SPECIES 9 ENSDLAG00005012556 rasgef1bb (ENSDLAG00005011529) ENSDLAG00005011485 ENSDLAG00005032465 ENSDLAG00005011466 ENSDLAG00005011448 ENSDLAG00005009802 ENSDLAG00005031297 ENSDLAG00005009681 ENSDLAG00005027687 ndr1 (ENSDLAG00005031812) ENSDLAG00005026462 ENSDLAG00005009265 ENSDLAG00005009244 ENSDLAG00005009241 ENSDLAG00005033489 ##22 ENSDLAG00005028312 ENSDLAG00005009209 ENSDLAG00005009189 ENSDLAG00005034631 ULK1 (ENSDLAG00005009082) ENSDLAG00005009053 sfswap (ENSDLAG00005008996) ENSDLAG00005008981 ENSDLAG00005008738 ENSDLAG00005008708 ENSDLAG00005008721 ube2g1b (ENSDLAG00005008612) ENSDLAG00005008625 ENSDLAG00005008595 ENSDLAG00005008589 Large yellow croaker MODERN SPECIES 3 rasgef1bb (ENSLCRG00005023618) antxr2b (ENSLCRG00005023616) paqr3b (ENSLCRG00005023615) slc26a1 (ENSLCRG00005023613) ENSLCRG00005023612 ENSLCRG00005023611 dusp4 (ENSLCRG00005023610) ENSLCRG00005023417 cldn23.1 (ENSLCRG00005023406) ENSLCRG00005023405 ndr1 (ENSLCRG00005023403) eif4ebp1 (ENSLCRG00005023402) ANK1 (ENSLCRG00005023388) nefma (ENSLCRG00005023386) neflb (ENSLCRG00005023385) pgam2 (ENSLCRG00005023383) ##22 stx2a (ENSLCRG00005023381) Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000181550 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Zig-zag eel MODERN SPECIES 3 ENSMAMG00000005889 ENSMAMG00000005968 ENSMAMG00000024834 ENSMAMG00000006023 ENSMAMG00000006038 ENSMAMG00000006069 ENSMAMG00000006199 ENSMAMG00000006223 ENSMAMG00000026839 ENSMAMG00000006351 ENSMAMG00000006358 ENSMAMG00000006368 ENSMAMG00000006388 ENSMAMG00000006452 ENSMAMG00000006458 ENSMAMG00000027866 ##22 ENSMAMG00000028496 ENSMAMG00000006507 ENSMAMG00000006543 ENSMAMG00000025233 ENSMAMG00000006569 ULK1 (ENSMAMG00000006585) ENSMAMG00000006609 sfswap (ENSMAMG00000006631) ENSMAMG00000006645 ENSMAMG00000006670 ENSMAMG00000006821 gpn3 (ENSMAMG00000006837) ENSMAMG00000028367 ube2g1b (ENSMAMG00000006875) ENSMAMG00000006898 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000181550 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Siamese fighting fish MODERN SPECIES 3 paqr3b (ENSBSLG00000017670) slc26a1 (ENSBSLG00000017692) ENSBSLG00000017717 dusp4 (ENSBSLG00000017732) ENSBSLG00000017806 cldn23.1 (ENSBSLG00000018724) ENSBSLG00000018846 ENSBSLG00000018862 ENSBSLG00000018881 ENSBSLG00000018907 ndr1 (ENSBSLG00000018933) eif4ebp1 (ENSBSLG00000018981) ANK1 (ENSBSLG00000019028) nefma (ENSBSLG00000019378) neflb (ENSBSLG00000019382) pgam2 (ENSBSLG00000019384) ##22 stx2a (ENSBSLG00000019389) MMP17 (ENSBSLG00000019441) ENSBSLG00000019497 crkl (ENSBSLG00000019518) si:ch211-222n4.2 (ENSBSLG00000019522) ULK1 (ENSBSLG00000019561) ENSBSLG00000019904 sfswap (ENSBSLG00000019922) TRABD2A (ENSBSLG00000019963) HOOK3 (ENSBSLG00000019985) rnf170 (ENSBSLG00000020182) gpn3 (ENSBSLG00000020193) arpc3 (ENSBSLG00000020198) ube2g1b (ENSBSLG00000020210) TMEM132C (ENSBSLG00000021010) Climbing perch MODERN SPECIES 13 rasgef1bb (ENSATEG00000021833) ENSATEG00000021812 ENSATEG00000021790 ENSATEG00000021714 ENSATEG00000021700 ENSATEG00000025333 ENSATEG00000021596 ENSATEG00000021577 ENSATEG00000021511 ENSATEG00000021486 ENSATEG00000021483 ENSATEG00000028413 ENSATEG00000021333 ENSATEG00000021287 ENSATEG00000021261 ENSATEG00000021248 ##22 ENSATEG00000021235 ENSATEG00000021212 ENSATEG00000021187 ENSATEG00000021179 ENSATEG00000021175 ULK1 (ENSATEG00000021132) ENSATEG00000021097 sfswap (ENSATEG00000021053) ENSATEG00000021041 ENSATEG00000020975 ENSATEG00000030102 ENSATEG00000020940 gpn3 (ENSATEG00000020912) ENSATEG00000028858 ube2g1b (ENSATEG00000020900) Carangaria ANCESTRAL SPECIES 17 ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00940000155816.a ENSGT00940000156320.d ENSGT00940000155291.b ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000167368 ENSGT00940000156664.c ENSGT00940000158699.q.a ENSGT00940000153892.B ENSGT00940000162805 ENSGT00940000158075 ENSGT00390000017123.b ENSGT00950000183172.A ENSGT00390000018018 ENSGT00940000165298.a.a ENSGT00940000154702.a.b ENSGT00940000166762 Tongue sole MODERN SPECIES 5 VAV2 (ENSCSEG00000005120) ENSCSEG00000005127 wdr5 (ENSCSEG00000005130) rxraa (ENSCSEG00000005139) LRRTM4 (ENSCSEG00000005148) ENSCSEG00000005154 cldn23.1 (ENSCSEG00000005168) ENSCSEG00000005171 ENSCSEG00000005180 eif4ebp1 (ENSCSEG00000005182) ENSCSEG00000005185 ANK1 (ENSCSEG00000005188) nefma (ENSCSEG00000005201) neflb (ENSCSEG00000005207) ENSCSEG00000005204 pgam2 (ENSCSEG00000005208) ##22 MMP17 (ENSCSEG00000005210) ENSCSEG00000005220 dnpep (ENSCSEG00000005230) desmb (ENSCSEG00000005241) tmem198b (ENSCSEG00000005251) ENSCSEG00000005254 arl13b (ENSCSEG00000005258) cckbra (ENSCSEG00000005266) cpo (ENSCSEG00000005269) nudt15 (ENSCSEG00000005276) gemin8 (ENSCSEG00000005280) ENSCSEG00000005285 rab9a (ENSCSEG00000005287) TCEANC (ENSCSEG00000005288) ENSCSEG00000005301 Turbot MODERN SPECIES 7 ENSSMAG00000017766 rasgef1bb (ENSSMAG00000017793) ENSSMAG00000017837 ENSSMAG00000017883 ENSSMAG00000017915 ENSSMAG00000017948 ENSSMAG00000017997 ENSSMAG00000018022 ENSSMAG00000018031 ENSSMAG00000018153 ENSSMAG00000018402 ENSSMAG00000022068 ENSSMAG00000018418 ENSSMAG00000018452 ENSSMAG00000018466 ENSSMAG00000031091 ##22 ENSSMAG00000018474 ENSSMAG00000018572 ENSSMAG00000018593 ENSSMAG00000018600 ENSSMAG00000018610 ULK1 (ENSSMAG00000018627) ENSSMAG00000018696 sfswap (ENSSMAG00000018718) ENSSMAG00000018744 ENSSMAG00000018754 ENSSMAG00000018842 gpn3 (ENSSMAG00000018848) ENSSMAG00000018899 ube2g1b (ENSSMAG00000018912) ENSSMAG00000018921 Carangaria_A ANCESTRAL SPECIES 34 ENSGT01100000263544.c.a.a.b ENSGT00940000155983.a.b ENSGT00940000168590 ENSGT00940000159066 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT01100000265222 ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.b Seriola ANCESTRAL SPECIES 167 ENSGT00940000156161.A ENSGT00390000006975 ENSGT00940000162544.c.a ENSGT00940000178065 ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00940000161685.A.a ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT01030000234627.a.b.a.b.b ENSGT00940000158699.q.a.f Yellowtail amberjack MODERN SPECIES 1897 NEFL (ENSSLDG00000011520) pgam2 (ENSSLDG00000011481) ##22 ENSSLDG00000011465 MMP17 (ENSSLDG00000011420) Greater amberjack MODERN SPECIES 278 ENSSDUG00000020636 cldn23.1 (ENSSDUG00000020667) ENSSDUG00000020680 ENSSDUG00000020714 ndr1 (ENSSDUG00000020729) eif4ebp1 (ENSSDUG00000020734) ENSSDUG00000020742 ANK1 (ENSSDUG00000020758) nefma (ENSSDUG00000020811) ENSSDUG00000020835 pgam2 (ENSSDUG00000020942) ##22 ENSSDUG00000020951 MMP17 (ENSSDUG00000020958) Barramundi perch MODERN SPECIES 174 ENSLCAG00010000378 ENSLCAG00010000391 dusp4 (ENSLCAG00010000398) ENSLCAG00010000812 cldn23.1 (ENSLCAG00010001336) ENSLCAG00010001345 ENSLCAG00010001357 ENSLCAG00010001362 ENSLCAG00010001366 ndr1 (ENSLCAG00010001372) eif4ebp1 (ENSLCAG00010001377) ANK1 (ENSLCAG00010001728) nefma (ENSLCAG00010003114) ENSLCAG00010003116 neflb (ENSLCAG00010003118) pgam2 (ENSLCAG00010003120) ##22 stx2a (ENSLCAG00010003127) MMP17 (ENSLCAG00010003136) Cod MODERN SPECIES 17 ENSGMOG00000031529 gadd45gb.1 (ENSGMOG00000036667) ENSGMOG00000010042 ENSGMOG00000026351 ghrb (ENSGMOG00000010024) c7b (ENSGMOG00000010005) c6 (ENSGMOG00000009978) rnf180b (ENSGMOG00000009952) ENSGMOG00000009945 ndr1 (ENSGMOG00000028107) eif4ebp1 (ENSGMOG00000016807) ENSGMOG00000016731 ENSGMOG00000016567 ENSGMOG00000025072 ENSGMOG00000035872 ENSGMOG00000001120 ##22 ENSGMOG00000009196 ENSGMOG00000009205 ENSGMOG00000011000 mpx (ENSGMOG00000006436) ENSGMOG00000026981 ENSGMOG00000010250 ENSGMOG00000029931 slc35e4 (ENSGMOG00000028981) ENSGMOG00000010225 ENSGMOG00000010198 ENSGMOG00000033911 ENSGMOG00000016003 ENSGMOG00000010170 ENSGMOG00000010125 trim69 (ENSGMOG00000010110) Protacanthopterygii ANCESTRAL SPECIES 26 ENSGT00940000166638 ENSGT00390000010075 ENSGT00940000165107.A ENSGT00940000156804.b ENSGT00940000156814 ENSGT01010000222287.B.b.b.b ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00730000111146.e ENSGT00940000154418.a.b ENSGT00940000156208.i ENSGT00950000182926.b.c ##22 ENSGT00730000111146.f ENSGT00940000161685.A.a ENSGT01100000265222 ENSGT00940000164254.a.b ENSGT00820000127055.b.e.b ENSGT00940000169602 ENSGT00820000127055.b.e.a ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044.m ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00390000017498.c ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 84 ENSGT00520000055591.b.c.b ENSGT00940000157299.d.d ENSGT00950000182964.a.b.a.a.b.e.d ENSGT00950000182964.a.b.a.a.b.f.d ENSGT00940000166638.b.a ENSGT00940000165107.A.a ENSGT00390000009130.b.d.b ENSGT00940000156814 ENSGT01010000222287.B.b.b.b ENSGT00940000163919.b.d ENSGT00940000159932.b ENSGT00940000155760.t.b.f ENSGT00730000111146.f ENSGT00940000161685.A.a.a ENSGT00940000156208.i.d ENSGT00950000182926.b.c.i ##22 ENSGT00940000164254.a.b.a ENSGT00820000127055.b.e.a ENSGT00730000111140.hc ENSGT00390000006044.m.a ENSGT00940000154702.a.b.d ENSGT00940000166762.b ENSGT00950000183203.c.a.c ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B.d ENSGT00940000158699.i ENSGT00940000156664.c.d ENSGT00940000165298.a.a.d ENSGT00390000018018.i ENSGT00950000183172.A.d ENSGT00390000012669.dc Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00520000055591.b.c.b ENSGT00940000157299.d.d ENSGT00950000182964.a.b.a.a.b.e.d ENSGT00950000182964.a.b.a.a.b.f.d ENSGT00940000166638.b.a ENSGT00940000165107.A.a ENSGT00390000009130.b.d.b ENSGT00940000156814 ENSGT01010000222287.B.b.b.b ENSGT00940000163919.b.d ENSGT00940000159932.b ENSGT00940000155760.t.b.f ENSGT00730000111146.f ENSGT00940000161685.A.a.a ENSGT00940000156208.i.d ENSGT00950000182926.b.c.i ##22 ENSGT00940000164254.a.b.a ENSGT00820000127055.b.e.a ENSGT00730000111140.hc ENSGT00390000006044.m.a ENSGT00940000154702.a.b.d ENSGT00940000166762.b ENSGT00950000183203.c.a.c ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B.d ENSGT00940000158699.i ENSGT00940000156664.c.d ENSGT00940000165298.a.a.d ENSGT00390000018018.i ENSGT00950000183172.A.d ENSGT00390000012669.dc Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00520000055591.b.c.b ENSGT00940000157299.d.d ENSGT00950000182964.a.b.a.a.b.e.d ENSGT00950000182964.a.b.a.a.b.f.d ENSGT00940000166638.b.a ENSGT00940000165107.A.a ENSGT00390000009130.b.d.b ENSGT00940000156814 ENSGT01010000222287.B.b.b.b ENSGT00940000163919.b.d ENSGT00940000159932.b ENSGT00940000155760.t.b.f ENSGT00730000111146.f ENSGT00940000161685.A.a.a ENSGT00940000156208.i.d ENSGT00950000182926.b.c.i ##22 ENSGT00940000164254.a.b.a ENSGT00820000127055.b.e.a ENSGT00730000111140.hc ENSGT00390000006044.m.a ENSGT00940000154702.a.b.d ENSGT00940000166762.b ENSGT00950000183203.c.a.c ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B.d ENSGT00940000158699.i ENSGT00940000156664.c.d ENSGT00940000165298.a.a.d ENSGT00390000018018.i ENSGT00950000183172.A.d ENSGT00390000012669.dc Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00520000055591.b.c.b ENSGT00940000157299.d.d ENSGT00950000182964.a.b.a.a.b.e.d ENSGT00950000182964.a.b.a.a.b.f.d ENSGT00940000166638.b.a ENSGT00940000165107.A.a ENSGT00390000009130.b.d.b ENSGT00940000156814 ENSGT01010000222287.B.b.b.b ENSGT00940000163919.b.d ENSGT00940000159932.b ENSGT00940000155760.t.b.f ENSGT00730000111146.f ENSGT00940000161685.A.a.a ENSGT00940000156208.i.d ENSGT00950000182926.b.c.i ##22 ENSGT00940000164254.a.b.a ENSGT00820000127055.b.e.a ENSGT00730000111140.hc ENSGT00390000006044.m.a ENSGT00940000154702.a.b.d ENSGT00940000166762.b ENSGT00950000183203.c.a.c ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B.d ENSGT00940000158699.i ENSGT00940000156664.c.d ENSGT00940000165298.a.a.d ENSGT00390000018018.i ENSGT00950000183172.A.d ENSGT00390000012669.dc Chinook salmon MODERN SPECIES 26 zgc:103482 (ENSOTSG00005012735) EFNA5 (ENSOTSG00005012734) GADD45G (ENSOTSG00005012733) gadd45gb.1 (ENSOTSG00005012732) ENSOTSG00005012731 ghrb (ENSOTSG00005012466) oxct1b (ENSOTSG00005009955) c6 (ENSOTSG00005007733) ENSOTSG00005007707 ndr1 (ENSOTSG00005007705) eif4ebp1 (ENSOTSG00005007704) ANK1 (ENSOTSG00005004812) ftsj1 (ENSOTSG00005004765) nefma (ENSOTSG00005004759) neflb (ENSOTSG00005004757) pgam2 (ENSOTSG00005004755) ##22 ENSOTSG00005004753 crkl (ENSOTSG00005004751) med15 (ENSOTSG00005004747) smpd4 (ENSOTSG00005003636) TMEM132C (ENSOTSG00005003605) ENSOTSG00005003604 RIMBP2 (ENSOTSG00005003465) stx2a (ENSOTSG00005003459) sfswap (ENSOTSG00005003457) MMP17 (ENSOTSG00005003450) ULK1 (ENSOTSG00005003419) ube2g1b (ENSOTSG00005045721) arpc3 (ENSOTSG00005045720) gpn3 (ENSOTSG00005045719) vps29 (ENSOTSG00005045716) Rainbow trout MODERN SPECIES 364 zgc:103482 (ENSOMYG00000047602) ENSOMYG00000047601 ENSOMYG00000047599 gadd45gb.1 (ENSOMYG00000047598) ENSOMYG00000047596 ghr (ENSOMYG00000047593) oxct1b (ENSOMYG00000047505) c6 (ENSOMYG00000047226) ENSOMYG00000047161 ndr1 (ENSOMYG00000047159) eif4ebp1 (ENSOMYG00000047155) ENSOMYG00000047104 ftsj1 (ENSOMYG00000063167) ENSOMYG00000047020 ENSOMYG00000047018 ENSOMYG00000066692 ##22 ENSOMYG00000047008 crkl (ENSOMYG00000047006) med15 (ENSOMYG00000046989) smpd4 (ENSOMYG00000046961) ENSOMYG00000069894 ENSOMYG00000059079 ENSOMYG00000046945 ENSOMYG00000046943 ENSOMYG00000046938 ENSOMYG00000046932 ENSOMYG00000071063 sfswap (ENSOMYG00000046928) ENSOMYG00000046924 ULK1 (ENSOMYG00000046852) ube2g1b (ENSOMYG00000046779) Salmo ANCESTRAL SPECIES 1 ENSGT00940000158634.b.j ENSGT00520000055591.b.c.b ENSGT00940000157299.d.d ENSGT00950000182964.a.b.a.a.b.e.d ENSGT00950000182964.a.b.a.a.b.f.d ENSGT00940000166638.b.a ENSGT00940000165107.A.a ENSGT00390000009130.b.d.b ENSGT00940000156814 ENSGT01010000222287.B.b.b.b ENSGT00940000163919.b.d ENSGT00940000155760.t.b.f ENSGT00730000111146.f ENSGT00940000161685.A.a.a ENSGT00940000156208.i.d ENSGT00950000182926.b.c.i ##22 ENSGT00940000164254.a.b.a ENSGT00820000127055.b.e.a ENSGT00730000111140.hc ENSGT00390000006044.m.a ENSGT00940000154702.a.b.d ENSGT00940000166762.b ENSGT00950000183203.c.a.c ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B.d ENSGT00940000158699.i ENSGT00940000156664.c.d ENSGT00940000165298.a.a.d ENSGT00390000018018.i ENSGT00950000183172.A.d ENSGT00390000012669.dc River trout MODERN SPECIES 3 ENSSTUG00000031447 EFNA5 (ENSSTUG00000031423) ENSSTUG00000031415 GADD45G (ENSSTUG00000031406) gadd45gb.1 (ENSSTUG00000031398) ENSSTUG00000031390 ghrb (ENSSTUG00000031364) oxct1b (ENSSTUG00000027739) c6 (ENSSTUG00000026741) ENSSTUG00000026708 ENSSTUG00000026699 ndr1 (ENSSTUG00000026694) ANK1 (ENSSTUG00000025834) nefma (ENSSTUG00000025801) neflb (ENSSTUG00000025796) pgam2 (ENSSTUG00000025783) ##22 ENSSTUG00000025720 crkl (ENSSTUG00000025694) med15 (ENSSTUG00000025664) smpd4 (ENSSTUG00000025178) ENSSTUG00000025140 TMEM132C (ENSSTUG00000025106) ENSSTUG00000025084 RIMBP2 (ENSSTUG00000024960) stx2a (ENSSTUG00000024934) ENSSTUG00000024930 ENSSTUG00000024925 sfswap (ENSSTUG00000024884) MMP17 (ENSSTUG00000024750) ULK1 (ENSSTUG00000024667) ube2g1b (ENSSTUG00000024625) Atlantic salmon MODERN SPECIES 2 ENSSSAG00000088854 ENSSSAG00000082974 ENSSSAG00000081529 gadd45gb.1 (ENSSSAG00000102182) ENSSSAG00000081527 ghrb (ENSSSAG00000081526) oxct1b (ENSSSAG00000106911) c6 (ENSSSAG00000081483) r7bpb (ENSSSAG00000097983) ENSSSAG00000081477 ndr1 (ENSSSAG00000081476) ENSSSAG00000081470 ftsj1 (ENSSSAG00000081466) nfm (ENSSSAG00000081465) ENSSSAG00000081463 ENSSSAG00000081461 ##22 ENSSSAG00000113868 crkl (ENSSSAG00000081459) med15 (ENSSSAG00000081458) smpd4 (ENSSSAG00000081417) ENSSSAG00000081413 ENSSSAG00000081411 ENSSSAG00000081391 ENSSSAG00000081379 ENSSSAG00000107178 sfswap (ENSSSAG00000081373) ENSSSAG00000106842 ULK1 (ENSSSAG00000081347) ube2g1 (ENSSSAG00000081338) arpc3 (ENSSSAG00000081334) gpn3 (ENSSSAG00000081331) Huchen MODERN SPECIES 591 ENSHHUG00000032401 ghrb (ENSHHUG00000032389) oxct1b (ENSHHUG00000032269) c6 (ENSHHUG00000032101) rgs7bpb (ENSHHUG00000032098) ENSHHUG00000032089 ndr1 (ENSHHUG00000032088) ENSHHUG00000032083 ENSHHUG00000032079 ENSHHUG00000032076 ENSHHUG00000032073 ENSHHUG00000032064 ftsj1 (ENSHHUG00000032060) nefma (ENSHHUG00000032056) neflb (ENSHHUG00000032053) pgam2 (ENSHHUG00000032048) ##22 ENSHHUG00000032033 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 252 ENSGT00940000156208.j.d ENSGT00940000157734.m ENSGT00730000113357 ENSGT00940000165076.a.f ENSGT00940000154909.b.b.d ENSGT00940000154909.a.a.c ENSGT00950000182864.a.b.b.a.a.b.f ENSGT00390000013415.a.b.ib.b ENSGT01030000234527.A.a.b.a.a.c.b.f ENSGT00940000159105.j ENSGT00390000008694.b.b.j ENSGT00940000165064.a.c ENSGT00730000111146.e ENSGT00940000161685.A.a.b ENSGT00940000156208.i.c ENSGT00950000182926.b.c.j.a ##22 ENSGT00940000164254.a.b.b ENSGT00820000127055.b.e.b ENSGT00730000111140.ic ENSGT00940000167368 ENSGT00390000006044.m.b ENSGT00940000154702.a.b.c ENSGT00940000166762.a.a ENSGT00390000017498.c ENSGT00950000183203.c.a.d ENSGT00390000005154.b ENSGT00940000158670.j ENSGT00940000154966.bb ENSGT00390000014879.c.a.a.b.h ENSGT00390000003282.A.g ENSGT00940000165688.e Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00940000157299.d.c ENSGT00950000182964.a.b.a.a.b.e.c ENSGT00950000182964.a.b.a.a.b.f.c ENSGT00940000166638.b.b ENSGT00390000010075 ENSGT00940000165107.A.b ENSGT00940000156804.b ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b.c ENSGT00940000155760.t.b.e ENSGT00730000111146.e ENSGT00940000161685.A.a.b ENSGT00940000156208.i.c ENSGT00950000182926.b.c.j.a ##22 ENSGT00940000164254.a.b.b ENSGT00820000127055.b.e.b ENSGT01000000220289 ENSGT00730000111140.ic ENSGT00940000167368 ENSGT00390000006044.m.b ENSGT00940000154702.a.b.c ENSGT00940000166762.a.a ENSGT00390000017498.c ENSGT00950000183203.c.a.d ENSGT00940000153892.B.c ENSGT00940000158699.j ENSGT00940000156664.c.c ENSGT00940000165298.a.a.c ENSGT00390000018018.j Salmo ANCESTRAL SPECIES ENSGT00950000182964.a.b.a.a.b.f.c ENSGT00940000166638.a ENSGT00390000010075 ENSGT00940000165107.A.b ENSGT00990000213146 ENSGT00940000156804.b ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b.c ENSGT00940000159932.b ENSGT00940000155760.t.b.e ENSGT00730000111146.e ENSGT00940000161685.A.a.b ENSGT00940000156208.i.c ENSGT00950000182926.b.c.j.a ##22 ENSGT00940000164254.a.b.b ENSGT00820000127055.b.e.b ENSGT01000000220289 ENSGT00730000111140.ic ENSGT00940000167368 ENSGT00390000006044.m.b ENSGT00940000154702.a.b.c ENSGT00940000166762.a.a ENSGT00390000017498.c ENSGT00950000183203.c.a.d ENSGT00940000153892.B.c.a ENSGT00940000158699.j ENSGT00940000156664.c.c ENSGT00940000165298.a.a.c ENSGT00390000018018.j Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 28 ENSSSAG00000107425 ENSSSAG00000106900 ENSSSAG00000082977 ENSSSAG00000120383 dusp1 (ENSSSAG00000005581) ENSSSAG00000060806 ENSSSAG00000015255 ENSSSAG00000108567 ENSSSAG00000042310 ENSSSAG00000071659 ENSSSAG00000011290 ENSSSAG00000101473 ENSSSAG00000071662 ENSSSAG00000115014 ENSSSAG00000071665 ENSSSAG00000071667 ##22 ENSSSAG00000071670 crkl (ENSSSAG00000071673) MED15 (ENSSSAG00000104209) si:ch211-222n4.2 (ENSSSAG00000071716) smpd4 (ENSSSAG00000071727) ENSSSAG00000102589 ENSSSAG00000071776 ENSSSAG00000071781 ENSSSAG00000112984 sfswap (ENSSSAG00000110276) ENSSSAG00000081366 ULK1 (ENSSSAG00000000318) ub2g1 (ENSSSAG00000120549) arpc3 (ENSSSAG00000030191) gpn3 (ENSSSAG00000097446) Atlantic salmon MODERN SPECIES gadd45gb.1 (ENSSSAG00000070322) ENSSSAG00000098302 ghrb (ENSSSAG00000070335) ENSSSAG00000070863 ENSSSAG00000070413 rnf180b (ENSSSAG00000099351) htr1ab (ENSSSAG00000070900) ENSSSAG00000070948 ftsj1 (ENSSSAG00000082019) ENSSSAG00000111499 ENSSSAG00000071661 ENSSSAG00000093362 ENSSSAG00000092291 ENSSSAG00000085621 ENSSSAG00000089786 ENSSSAG00000083510 ##22 ENSSSAG00000116846 crkl (ENSSSAG00000089033) med15 (ENSSSAG00000071684) si:ch211-222n4.2 (ENSSSAG00000097476) smpd4 (ENSSSAG00000118362) ENSSSAG00000081911 ENSSSAG00000082402 ENSSSAG00000104306 sfswap (ENSSSAG00000000140) ENSSSAG00000108414 mmp17 (ENSSSAG00000000176) ULK1 (ENSSSAG00000096036) ub2g1 (ENSSSAG00000000483) arpc3 (ENSSSAG00000000509) gpn3 (ENSSSAG00000000532) Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000157299.d.c ENSGT00950000182964.a.b.a.a.b.e.c ENSGT00950000182964.a.b.a.a.b.f.c ENSGT00940000166638.b.b ENSGT00390000010075 ENSGT00940000165107.A.b.a ENSGT00940000156804.b ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b.c ENSGT00940000155760.t.b.e ENSGT00730000111146.e ENSGT00940000161685.A.a.b ENSGT00940000156208.i.c ENSGT00950000182926.b.c.j.a ##22 ENSGT00940000164254.a.b.b ENSGT00820000127055.b.e.b ENSGT01000000220289 ENSGT00730000111140.ic ENSGT00940000167368 ENSGT00390000006044.m.b ENSGT00940000154702.a.b.c ENSGT00940000166762.a.a ENSGT00390000017498.c ENSGT00950000183203.c.a.d ENSGT00940000153892.B.c ENSGT00940000158699.j ENSGT00940000156664.c.c ENSGT00940000165298.a.a.c ENSGT00390000018018.j Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00940000157299.d.c ENSGT00950000182964.a.b.a.a.b.e.c ENSGT00950000182964.a.b.a.a.b.f.c ENSGT00940000166638.b.b ENSGT00390000010075 ENSGT00940000165107.A.b.a ENSGT00940000156804.b ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b.c ENSGT00940000155760.t.b.e ENSGT00730000111146.e ENSGT00940000161685.A.a.b ENSGT00940000156208.i.c ENSGT00950000182926.b.c.j.a ##22 ENSGT00940000164254.a.b.b ENSGT00820000127055.b.e.b ENSGT01000000220289 ENSGT00730000111140.ic ENSGT00940000167368 ENSGT00390000006044.m.b ENSGT00940000154702.a.b.c ENSGT00940000166762.a.a ENSGT00390000017498.c ENSGT00950000183203.c.a.d ENSGT00940000153892.B.c ENSGT00940000158699.j ENSGT00940000156664.c.c ENSGT00940000165298.a.a.c ENSGT00390000018018.j Coho salmon MODERN SPECIES 15 EFNA5 (ENSOKIG00005011006) GADD45G (ENSOKIG00005011014) gadd45gb.1 (ENSOKIG00005011016) ENSOKIG00005011027 ENSOKIG00005011035 ghrb (ENSOKIG00005011052) c7b (ENSOKIG00005011183) rgs7bpb (ENSOKIG00005012351) rnf180b (ENSOKIG00005012363) htr1ab (ENSOKIG00005012371) ENSOKIG00005012377 ANK1 (ENSOKIG00005012537) ftsj1 (ENSOKIG00005015471) ENSOKIG00005015502 NEFL (ENSOKIG00005015557) PGAM2 (ENSOKIG00005015568) ##22 ENSOKIG00005015573 crkl (ENSOKIG00005015581) ENSOKIG00005015592 med15 (ENSOKIG00005015618) si:ch211-222n4.2 (ENSOKIG00005015793) smpd4 (ENSOKIG00005015846) TMEM132C (ENSOKIG00005015952) ENSOKIG00005015965 ENSOKIG00005015975 ENSOKIG00005016041 sfswap (ENSOKIG00005016180) MMP17 (ENSOKIG00005016245) ULK1 (ENSOKIG00005016726) ube2g1b (ENSOKIG00005016950) arpc3 (ENSOKIG00005017031) Chinook salmon MODERN SPECIES 12 EFNA5 (ENSOTSG00005007541) GADD45G (ENSOTSG00005007539) gadd45gb.1 (ENSOTSG00005007537) ENSOTSG00005007535 ENSOTSG00005007533 ghrb (ENSOTSG00005007531) c7b (ENSOTSG00005007485) rgs7bpb (ENSOTSG00005007483) rnf180b (ENSOTSG00005007481) htr1ab (ENSOTSG00005007477) ENSOTSG00005007476 ANK1 (ENSOTSG00005002114) ftsj1 (ENSOTSG00005002050) nefma (ENSOTSG00005002034) NEFL (ENSOTSG00005001789) pgam2 (ENSOTSG00005046774) ##22 ENSOTSG00005046773 crkl (ENSOTSG00005046772) ENSOTSG00005046771 med15 (ENSOTSG00005046770) si:ch211-222n4.2 (ENSOTSG00005046769) smpd4 (ENSOTSG00005046749) TMEM132C (ENSOTSG00005046744) ENSOTSG00005046743 ENSOTSG00005046742 RIMBP2 (ENSOTSG00005046737) sfswap (ENSOTSG00005046734) MMP17 (ENSOTSG00005046716) ULK1 (ENSOTSG00005046700) ube2g1b (ENSOTSG00005046699) arpc3 (ENSOTSG00005046698) Rainbow trout MODERN SPECIES 26 gadd45gb.1 (ENSOMYG00000034440) ENSOMYG00000034483 ghr1 (ENSOMYG00000034417) c7b (ENSOMYG00000032326) rgs7bpb (ENSOMYG00000032081) rnf180b (ENSOMYG00000032072) htr1ab (ENSOMYG00000032055) ndr1 (ENSOMYG00000032048) ENSOMYG00000064670 ENSOMYG00000030029 ftsj1 (ENSOMYG00000028976) ENSOMYG00000069784 ENSOMYG00000028862 ENSOMYG00000060145 ENSOMYG00000028808 ENSOMYG00000028792 ##22 ENSOMYG00000028760 crkl (ENSOMYG00000028728) ENSOMYG00000028721 ENSOMYG00000028679 si:ch211-222n4.2 (ENSOMYG00000028622) ENSOMYG00000048056 smpd4 (ENSOMYG00000028516) ENSOMYG00000028346 ENSOMYG00000028277 ENSOMYG00000028219 ENSOMYG00000068488 sfswap (ENSOMYG00000028171) ENSOMYG00000060271 ULK1 (ENSOMYG00000026505) ube2g1b (ENSOMYG00000026134) Huchen MODERN SPECIES 538 gadd45gb.1 (ENSHHUG00000046200) ENSHHUG00000046198 ENSHHUG00000046190 ghrb (ENSHHUG00000046164) c7b (ENSHHUG00000046039) rgs7bpb (ENSHHUG00000046027) ENSHHUG00000046024 ENSHHUG00000046017 htr1ab (ENSHHUG00000046016) ENSHHUG00000046014 ENSHHUG00000046012 ANK1 (ENSHHUG00000045846) ftsj1 (ENSHHUG00000045829) NEFM (ENSHHUG00000045828) NEFL (ENSHHUG00000045825) pgam2 (ENSHHUG00000045808) ##22 ENSHHUG00000045787 crkl (ENSHHUG00000045781) med15 (ENSHHUG00000045753) si:ch211-222n4.2 (ENSHHUG00000045750) smpd4 (ENSHHUG00000045735) Salmoninae ANCESTRAL SPECIES ENSGT00950000182926.b.c.j.b ##22 Huchen MODERN SPECIES 11828 ENSHHUG00000019470 ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182926.b.c.j.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182926.b.c.j.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000182926.b.c.j.b ##22 Coho salmon MODERN SPECIES 21 ENSOKIG00005051000 EFNA5 (ENSOKIG00005050999) GADD45G (ENSOKIG00005050998) gadd45gb.1 (ENSOKIG00005050997) ENSOKIG00005050996 ghrb (ENSOKIG00005050995) oxct1b (ENSOKIG00005050994) c6 (ENSOKIG00005050993) ENSOKIG00005050992 ndr1 (ENSOKIG00005050991) ENSOKIG00005050990 ANK1 (ENSOKIG00005050989) ftsj1 (ENSOKIG00005050986) nefma (ENSOKIG00005050985) neflb (ENSOKIG00005050984) pgam2 (ENSOKIG00005050983) ##22 ENSOKIG00005050981 crkl (ENSOKIG00005050980) med15 (ENSOKIG00005050979) smpd4 (ENSOKIG00005050974) TMEM132C (ENSOKIG00005050969) ENSOKIG00005050966 RIMBP2 (ENSOKIG00005050961) stx2a (ENSOKIG00005050960) ENSOKIG00005050958 ENSOKIG00005050957 sfswap (ENSOKIG00005050956) MMP17 (ENSOKIG00005050955) ENSOKIG00005050953 ULK1 (ENSOKIG00005050950) ube2g1b (ENSOKIG00005050949) Salmo ANCESTRAL SPECIES ENSGT00950000182926.b.c.j.b ##22 River trout MODERN SPECIES 15 gadd45gb.1 (ENSSTUG00000016615) ENSSTUG00000016631 ENSSTUG00000016642 ghrb (ENSSTUG00000016658) ENSSTUG00000016685 c7b (ENSSTUG00000016707) rgs7bpb (ENSSTUG00000016907) rnf180b (ENSSTUG00000016963) htr1ab (ENSSTUG00000016972) ENSSTUG00000016975 eif4ebp1 (ENSSTUG00000016984) ANK1 (ENSSTUG00000017006) ftsj1 (ENSSTUG00000032190) nefma (ENSSTUG00000032250) NEFL (ENSSTUG00000032264) pgam2 (ENSSTUG00000032273) ##22 ENSSTUG00000032296 crkl (ENSSTUG00000032315) ENSSTUG00000032327 med15 (ENSSTUG00000032361) si:ch211-222n4.2 (ENSSTUG00000032477) smpd4 (ENSSTUG00000032515) TMEM132C (ENSSTUG00000032659) ENSSTUG00000032932 RIMBP2 (ENSSTUG00000032975) sfswap (ENSSTUG00000033081) MMP17 (ENSSTUG00000033116) ULK1 (ENSSTUG00000033237) ube2g1b (ENSSTUG00000034774) arpc3 (ENSSTUG00000034830) gpn3 (ENSSTUG00000034799) Northern pike MODERN SPECIES 13 EFNA5 (ENSELUG00000034260) GADD45G (ENSELUG00000011831) gadd45gb.1 (ENSELUG00000011823) ENSELUG00000011802 ENSELUG00000028900 ghrb (ENSELUG00000011769) c7b (ENSELUG00000011733) c6 (ENSELUG00000011662) rnf180b (ENSELUG00000011598) ENSELUG00000011574 ndr1 (ENSELUG00000011567) ANK1 (ENSELUG00000011547) ftsj1 (ENSELUG00000011483) NEFM (ENSELUG00000011468) neflb (ENSELUG00000011459) pgam2 (ENSELUG00000011434) ##22 ENSELUG00000011420 crkl (ENSELUG00000011394) med15 (ENSELUG00000011355) si:ch211-222n4.2 (ENSELUG00000011289) smpd4 (ENSELUG00000011271) TMEM132C (ENSELUG00000011190) ENSELUG00000011149 ENSELUG00000011126 RIMBP2 (ENSELUG00000011063) ENSELUG00000011011 sfswap (ENSELUG00000010942) MMP17 (ENSELUG00000010862) ULK1 (ENSELUG00000010787) ube2g1b (ENSELUG00000010679) arpc3 (ENSELUG00000010620) Otomorpha ANCESTRAL SPECIES 60 ENSGT00940000166638 ENSGT00390000010075 ENSGT00940000165107.A ENSGT00390000009130.b.d.b ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00730000111146 ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000169602 ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664.c ENSGT00950000183160.B ENSGT00390000016776 Otophysi ANCESTRAL SPECIES 37 ENSGT00940000161886 ENSGT01030000234534.B.a.a.a.b ENSGT00950000182914.a.b ENSGT00940000157215 ENSGT00940000160508 ENSGT00940000163023 ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b Characiphysae ANCESTRAL SPECIES 23 ENSGT00940000161886 ENSGT01030000234534.B.a.a.a.b ENSGT00950000182914.a.b ENSGT00940000157215 ENSGT00940000160508 ENSGT00940000163023 ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00390000003581 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT00530000063497.a.a ENSGT00940000181939 ENSGT00940000156662.d ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000153592.B.b.a.b Channel catfish MODERN SPECIES 9 gzmk (ENSIPUG00000004016) rxfp3 (ENSIPUG00000004003) slc45a2 (ENSIPUG00000003993) AMACR (ENSIPUG00000003980) btc (ENSIPUG00000003972) myl5 (ENSIPUG00000003872) hpse (ENSIPUG00000003847) helq (ENSIPUG00000003800) mrps18c (ENSIPUG00000003783) fam175a (ENSIPUG00000003772) agpat9 (ENSIPUG00000003715) nkx6.1 (ENSIPUG00000003661) rpl17 (ENSIPUG00000003599) nefm (ENSIPUG00000003572) neflb (ENSIPUG00000003563) pgam2 (ENSIPUG00000003558) ##22 ENSIPUG00000003546 crkl (ENSIPUG00000003533) med15 (ENSIPUG00000003511) cp080 (ENSIPUG00000003491) odf2 (ENSIPUG00000003472) RIMBP2 (ENSIPUG00000003435) ENSIPUG00000003418 TMEM132C (ENSIPUG00000003376) ENSIPUG00000003370 smpd4 (ENSIPUG00000003269) sptan1 (ENSIPUG00000003170) wdr34 (ENSIPUG00000003139) ENSIPUG00000003113 snrpd3 (ENSIPUG00000003083) ADORA2A (ENSIPUG00000003063) Characiphysae_b ANCESTRAL SPECIES 21 ENSGT00940000161886 ENSGT01030000234534.B.a.a.a.b ENSGT00950000182914.a.b ENSGT00940000157215 ENSGT00940000160508 ENSGT00940000163023 ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00390000003581 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT00530000063497.a.a ENSGT00940000181939 ENSGT00940000156662.d ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000153592.B.b.a.b Characoidei ANCESTRAL SPECIES 31 ENSGT00940000161886 ENSGT01030000234534.B.a.a.a.b ENSGT00950000182914.a.b ENSGT00940000157215 ENSGT00940000160508 ENSGT00940000163023 ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00390000003581 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT00530000063497.a.a ENSGT00940000181939 ENSGT00940000156662.d ENSGT00940000158483 ENSGT00940000153877.a.a.b ENSGT00940000153592.B.b.a.b Mexicana tetra MODERN SPECIES 66 ENSAMXG00000034072 rxfp3 (ENSAMXG00000025441) slc45a2 (ENSAMXG00000011270) amacr (ENSAMXG00000029907) btc (ENSAMXG00000037033) MYL5 (ENSAMXG00000034506) hpse (ENSAMXG00000032004) HELQ (ENSAMXG00000012252) mrps18c (ENSAMXG00000012238) ENSAMXG00000029786 abraxas1 (ENSAMXG00000038713) gpat3 (ENSAMXG00000012191) nkx6.1 (ENSAMXG00000001095) rpl17 (ENSAMXG00000001082) nefma (ENSAMXG00000040032) pgam2 (ENSAMXG00000030317) ##22 ENSAMXG00000001033 neflb (ENSAMXG00000001050) crkl (ENSAMXG00000041556) ENSAMXG00000037233 med15 (ENSAMXG00000040274) si:ch211-222n4.2 (ENSAMXG00000031218) smpd4 (ENSAMXG00000031407) ENSAMXG00000026016 ENSAMXG00000031497 TMEM132C (ENSAMXG00000002738) ENSAMXG00000038695 ENSAMXG00000031686 ENSAMXG00000031269 RIMBP2 (ENSAMXG00000002674) rnf145b (ENSAMXG00000030834) Red-bellied piranha MODERN SPECIES 7 GZMK (ENSPNAG00000009628) rxfp3 (ENSPNAG00000005660) slc45a2 (ENSPNAG00000009592) amacr (ENSPNAG00000009549) btc (ENSPNAG00000009530) MYL5 (ENSPNAG00000009502) hpse (ENSPNAG00000009474) HELQ (ENSPNAG00000009397) mrps18c (ENSPNAG00000009350) abraxas1 (ENSPNAG00000009295) gpat3 (ENSPNAG00000009267) nkx6.1 (ENSPNAG00000009232) rpl17 (ENSPNAG00000009219) nefma (ENSPNAG00000009165) NEFL (ENSPNAG00000009120) pgam2 (ENSPNAG00000009116) ##22 ENSPNAG00000009104 crkl (ENSPNAG00000001291) med15 (ENSPNAG00000001282) si:ch211-222n4.2 (ENSPNAG00000009045) smpd4 (ENSPNAG00000009011) exd1 (ENSPNAG00000008931) TMEM132C (ENSPNAG00000001248) ENSPNAG00000008911 RIMBP2 (ENSPNAG00000008889) ODF2 (ENSPNAG00000008848) si:dkey-228b2.6 (ENSPNAG00000008828) sptan1 (ENSPNAG00000008819) dync2i2 (ENSPNAG00000001185) setb (ENSPNAG00000008749) SPECC1L (ENSPNAG00000008727) Electric eel MODERN SPECIES 34 ENSEEEG00000014507 rxfp3 (ENSEEEG00000014508) slc45a2 (ENSEEEG00000014510) amacr (ENSEEEG00000014511) btc (ENSEEEG00000014515) MYL5 (ENSEEEG00000014516) hpse (ENSEEEG00000014517) HELQ (ENSEEEG00000014526) mrps18c (ENSEEEG00000014582) abraxas1 (ENSEEEG00000014584) gpat3 (ENSEEEG00000014590) nkx6.1 (ENSEEEG00000014599) rpl17 (ENSEEEG00000014601) nefma (ENSEEEG00000014609) neflb (ENSEEEG00000014611) pgam2 (ENSEEEG00000014613) ##22 ENSEEEG00000014615 crkl (ENSEEEG00000014627) med15 (ENSEEEG00000014633) smpd4 (ENSEEEG00000014671) ENSEEEG00000014736 TMEM132C (ENSEEEG00000014738) si:ch211-175m2.5 (ENSEEEG00000014760) smim19 (ENSEEEG00000014762) egr1 (ENSEEEG00000014764) reep2 (ENSEEEG00000014767) KDM3B (ENSEEEG00000014784) spon2a (ENSEEEG00000014958) ctbp1 (ENSEEEG00000014965) ENSEEEG00000015218 ENSEEEG00000015221 Cyprinoidei ANCESTRAL SPECIES 54 ENSGT00940000157400 ENSGT00940000163160.a ENSGT01030000234534.B.a.a.a.b ENSGT00950000182914.a.b ENSGT00940000157215 ENSGT00940000160508 ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.b.a.a.a ENSGT00940000160897 ENSGT00950000183010.a.a.b ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00820000127055.b ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 141 ENSGT00940000160897.h ENSGT00950000183010.a.a.b.f ENSGT00940000161685.A.a.d.b ENSGT00940000156208.i.e.a ENSGT00950000182926.b.c.k ##22 ENSGT00820000127055.b.c ENSGT00390000006044.k ENSGT00940000154702.a.b.b ENSGT00940000166762.d ENSGT00950000183203.c.a.a ENSGT01030000234627.a.b.a.b.b.a ENSGT00940000156436.w.b ENSGT01040000240817.a ENSGT00940000159718.o.a ENSGT00940000162790.b.c.b ENSGT00940000154143.d.c ENSGT00940000159789.r.b ENSGT00940000155591.j.c ENSGT01030000234614.B.a.a.a.u ENSGT00940000160428.b.a.a.b Goldfish MODERN SPECIES 40 c1qtnf1 (ENSCARG00000069846) RBFOX3 (ENSCARG00000069848) ENSCARG00000069850 nf2b (ENSCARG00000069851) ENSCARG00000069853 sdf2 (ENSCARG00000069856) supt6h (ENSCARG00000069868) ENSCARG00000069899 rpl23a (ENSCARG00000023797) tlcd1 (ENSCARG00000023822) nipal4 (ENSCARG00000023829) nkx6.1 (ENSCARG00000023839) rpl17 (ENSCARG00000023847) nefma (ENSCARG00000023855) NEFL (ENSCARG00000023860) pgam2 (ENSCARG00000023868) ##22 crkl (ENSCARG00000023888) med15 (ENSCARG00000023896) smpd4 (ENSCARG00000024004) ENSCARG00000025638 ENSCARG00000025650 gpat3 (ENSCARG00000025669) abraxas1 (ENSCARG00000025778) mrps18c (ENSCARG00000025796) hpse (ENSCARG00000025811) btc (ENSCARG00000025870) amacr (ENSCARG00000025874) slc45a2 (ENSCARG00000025889) rxfp3 (ENSCARG00000025900) rai14 (ENSCARG00000025949) fgf10a (ENSCARG00000026221) Cyprininae_a ANCESTRAL SPECIES 89 ENSGT00940000158907.c.b ENSGT00940000157400.d ENSGT01030000234534.B.a.a.a.b.d ENSGT00950000182914.a.b.e ENSGT00940000157215.c ENSGT00940000160508.a ENSGT00390000004874.a.b.d ENSGT00940000157350.p ENSGT00940000165965.a.b ENSGT00530000063424.b.w ENSGT01030000234574.B.c.b.a.a.a.a ENSGT00940000160897.h ENSGT00950000183010.a.a.b.f ENSGT00940000161685.A.a.d.b ENSGT00940000156208.i.e.a ENSGT00950000182926.b.c.k ##22 ENSGT00820000127055.b.c ENSGT00730000111140.dc ENSGT00940000167368 ENSGT00390000006044.k ENSGT00940000154702.a.b.b ENSGT00940000166762.d ENSGT00950000183203.c.a.a ENSGT01030000234627.a.b.a.b.b.a ENSGT00940000156436.w.b ENSGT01040000240817.a ENSGT00940000159718.o.a ENSGT00940000162790.b.c.b ENSGT00940000154143.d.c ENSGT00940000159789.r.b ENSGT00940000155591.j.c Golden-line barbel MODERN SPECIES 144 ENSSGRG00000027950 ENSSGRG00000027956 nnt (ENSSGRG00000027964) fgf10a (ENSSGRG00000028653) rai14 (ENSSGRG00000028657) slc45a2 (ENSSGRG00000028666) ENSSGRG00000028667 btc (ENSSGRG00000028668) hpse (ENSSGRG00000028724) HELQ (ENSSGRG00000028671) abraxas1 (ENSSGRG00000028729) gpat3 (ENSSGRG00000028732) nkx6.1 (ENSSGRG00000028833) nefma (ENSSGRG00000028836) NEFL (ENSSGRG00000028838) pgam2 (ENSSGRG00000028839) ##22 crkl (ENSSGRG00000028843) med15 (ENSSGRG00000028845) si:ch211-222n4.2 (ENSSGRG00000028919) smpd4 (ENSSGRG00000028920) ENSSGRG00000028921 ENSSGRG00000028922 Common carp reference MODERN SPECIES 38 nnt (ENSCCRG00000077664) fgf10a (ENSCCRG00000041138) rai14 (ENSCCRG00000041158) slc45a2 (ENSCCRG00000024947) amacr (ENSCCRG00000073501) btc (ENSCCRG00000072417) hpse (ENSCCRG00000049378) HELQ (ENSCCRG00000022228) mrps18c (ENSCCRG00000056607) abraxas1 (ENSCCRG00000074286) gpat3 (ENSCCRG00000029084) nkx6.1 (ENSCCRG00000009898) ENSCCRG00000069417 ENSCCRG00000009887 nefma (ENSCCRG00000055322) ENSCCRG00000055031 ##22 ENSCCRG00000034745 crkl (ENSCCRG00000034747) med15 (ENSCCRG00000081800) smpd4 (ENSCCRG00000048346) ENSCCRG00000064563 ENSCCRG00000058288 ENSCCRG00000024984 ENSCCRG00000078045 stx2a (ENSCCRG00000010609) ENSCCRG00000029921 brd3a (ENSCCRG00000049737) wdr5 (ENSCCRG00000067522) rxraa (ENSCCRG00000011147) gsna (ENSCCRG00000024564) stom (ENSCCRG00000077944) Cyprininae ANCESTRAL SPECIES 85 ENSGT00940000163160.a.d.a ENSGT01030000234534.B.a.a.a.b.d ENSGT00950000182914.a.b.f ENSGT00940000157215.d ENSGT00940000160508.b ENSGT00390000004874.a.b.c ENSGT00940000165965.b ENSGT00940000157350.o ENSGT00940000165965.a.a ENSGT00530000063424.b.x ENSGT01030000234574.B.c.b.a.a.a.b ENSGT00940000160897.g ENSGT00950000183010.a.a.b.e ENSGT00940000161685.A.a.d.a ENSGT00940000156208.i.e.b ENSGT00950000182926.b.c.l ##22 ENSGT00820000127055.b.d ENSGT00730000111140 ENSGT00390000006044.l ENSGT00940000154702.a.b.a ENSGT00940000166762.c ENSGT00950000183203.c.a.b ENSGT01030000234627.a.b.a.b.b.b ENSGT00940000156436.w.a ENSGT00390000014845.ab ENSGT00940000166328.b ENSGT00940000159721.h.j.a ENSGT00940000159721.h.i.b ENSGT00390000015020.c ENSGT00940000159585.h ENSGT00950000182989.D.a.b.h Cyprininae_a ANCESTRAL SPECIES 44 ENSGT00940000158907.c.a ENSGT00940000157400.c ENSGT00940000163160.a.d.a ENSGT00940000157215.d.a ENSGT00940000160508.b ENSGT00390000004874.a.b.c ENSGT00940000165965.b ENSGT00940000157350.o ENSGT00940000165965.a.a ENSGT00530000063424.b.x ENSGT01030000234574.B.c.b.a.a.a.b ENSGT00940000160897.g ENSGT00950000183010.a.a.b.e ENSGT00940000161685.A.a.d.a ENSGT00940000165501.d ENSGT00950000182926.b.c.l ##22 ENSGT00820000127055.b.d ENSGT00730000111140.ec ENSGT00390000006044.l ENSGT00940000154702.a.b.a ENSGT00940000166762.c ENSGT00950000183203.c.a.b ENSGT01030000234627.a.b.a.b.b.b ENSGT00940000156436.w.a ENSGT01040000240817.b ENSGT00940000159718.o.b ENSGT00940000162790.b.c.a ENSGT00940000154143.d.d ENSGT00940000156436.x.b ENSGT00940000156436.x.a ENSGT00940000159789.r.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 113 fgf10a (ENSSGRG00000044846) rai14 (ENSSGRG00000044750) ENSSGRG00000044741 rxfp3 (ENSSGRG00000044740) slc45a2 (ENSSGRG00000044738) amacr (ENSSGRG00000044736) hpse (ENSSGRG00000044734) ENSSGRG00000044733 mrps18c (ENSSGRG00000044732) HELQ (ENSSGRG00000044678) gpat3 (ENSSGRG00000044379) nkx6.1 (ENSSGRG00000044364) nefma (ENSSGRG00000044361) ENSSGRG00000044359 pgam2 (ENSSGRG00000044357) ##22 pgam2 (ENSSGRG00000044355) ##22 crkl (ENSSGRG00000044353) med15 (ENSSGRG00000044299) smpd4 (ENSSGRG00000044217) Golden-line barbel MODERN SPECIES 113 nnt (ENSSGRG00000044890) fgf10a (ENSSGRG00000044846) rai14 (ENSSGRG00000044750) ENSSGRG00000044741 rxfp3 (ENSSGRG00000044740) slc45a2 (ENSSGRG00000044738) amacr (ENSSGRG00000044736) hpse (ENSSGRG00000044734) ENSSGRG00000044733 mrps18c (ENSSGRG00000044732) HELQ (ENSSGRG00000044678) gpat3 (ENSSGRG00000044379) nkx6.1 (ENSSGRG00000044364) nefma (ENSSGRG00000044361) ENSSGRG00000044359 pgam2 (ENSSGRG00000044357) ##22 pgam2 (ENSSGRG00000044355) ##22 crkl (ENSSGRG00000044353) med15 (ENSSGRG00000044299) smpd4 (ENSSGRG00000044217) Common carp reference MODERN SPECIES 45 ENSCCRG00000019874 nnt (ENSCCRG00000057395) fgf10a (ENSCCRG00000020695) rai14 (ENSCCRG00000020713) ENSCCRG00000021186 amacr (ENSCCRG00000021193) btc (ENSCCRG00000070380) hpse (ENSCCRG00000018956) HELQ (ENSCCRG00000049351) mrps18c (ENSCCRG00000049341) abraxas1 (ENSCCRG00000022204) gpat3 (ENSCCRG00000049286) nkx6.1 (ENSCCRG00000077610) rpl17 (ENSCCRG00000025631) nefma (ENSCCRG00000053665) pgam2 (ENSCCRG00000076384) ##22 ENSCCRG00000045333 ENSCCRG00000045323 ENSCCRG00000072989 med15 (ENSCCRG00000069677) smpd4 (ENSCCRG00000030618) ENSCCRG00000062413 ENSCCRG00000023977 ENSCCRG00000023964 stx2a (ENSCCRG00000048584) dnai1.2 (ENSCCRG00000047227) ENSCCRG00000030916 ENSCCRG00000048535 brd3a (ENSCCRG00000051597) wdr5 (ENSCCRG00000052996) ENSCCRG00000059080 Goldfish MODERN SPECIES 13 slc26a1 (ENSCARG00000007013) rbp4l (ENSCARG00000007026) PDE6B (ENSCARG00000007078) atp5mea (ENSCARG00000007526) ENSCARG00000007539 ENSCARG00000007546 hpse (ENSCARG00000007573) HELQ (ENSCARG00000007636) mrps18c (ENSCARG00000007773) abraxas1 (ENSCARG00000007783) gpat3 (ENSCARG00000007805) nkx6.1 (ENSCARG00000008308) rpl17 (ENSCARG00000008315) nefma (ENSCARG00000008332) NEFL (ENSCARG00000008349) pgam2 (ENSCARG00000008359) ##22 crkl (ENSCARG00000008369) smpd4 (ENSCARG00000008444) TMEM132C (ENSCARG00000010129) ENSCARG00000010135 RIMBP2 (ENSCARG00000010157) stx2a (ENSCARG00000010257) dnai1.2 (ENSCARG00000010308) ENSCARG00000010865 VAV2 (ENSCARG00000010911) ENSCARG00000012130 lhx5 (ENSCARG00000012184) GCNT4 (ENSCARG00000012190) GCNT4 (ENSCARG00000012193) gnrh2a (ENSCARG00000012201) ptpra (ENSCARG00000012252) Zebrafish MODERN SPECIES 13 rai14 (ENSDARG00000039974) ENSDARG00000090380 ENSDARG00000028780 rxfp3 (ENSDARG00000057410) slc45a2 (ENSDARG00000002593) amacr (ENSDARG00000057435) btc (ENSDARG00000098112) hpse (ENSDARG00000063634) helq (ENSDARG00000079818) mrps18c (ENSDARG00000069624) abraxas1 (ENSDARG00000043339) gpat3 (ENSDARG00000016048) nkx6.1 (ENSDARG00000022569) nefma (ENSDARG00000021351) ENSDARG00000057568 pgam2 (ENSDARG00000057571) ##22 rpl17 (ENSDARG00000057556) MPP4 (ENSDARG00000009386) ENSDARG00000058477 crkl (ENSDARG00000028699) med15 (ENSDARG00000014292) si:ch211-222n4.2 (ENSDARG00000093026) smpd4 (ENSDARG00000020730) si:dkey-65l23.2 (ENSDARG00000093234) TMEM132C (ENSDARG00000074863) ENSDARG00000075837 RIMBP2 (ENSDARG00000104101) DNAI1 (ENSDARG00000100081) wdr5 (ENSDARG00000016903) brd3a (ENSDARG00000006527) VAV2 (ENSDARG00000044718) Clupeiformes ANCESTRAL SPECIES 16 ENSGT00950000182964.a.b.a.a.b.f ENSGT00940000166638 ENSGT00940000165107.A ENSGT00390000009130.b.d.b ENSGT00940000156804.b ENSGT00940000156814 ENSGT00940000153725.b.c ENSGT00950000182909.a.e ENSGT00940000154484.B.a.a ENSGT00940000163919.b ENSGT00940000159932.b ENSGT00940000155760.t.b ENSGT00730000111146 ENSGT00940000161685.A.a.d ENSGT00940000156208.i.e ENSGT00950000182926.b.c ##22 ENSGT00940000164254.a.b ENSGT00820000127055.b ENSGT00940000169602 ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00940000166762 ENSGT00950000183203.c.a ENSGT01030000234627.a.b.a.b.b ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664.c ENSGT00950000183160.B ENSGT00390000016776 Denticle herring MODERN SPECIES 13 sfswap (ENSDCDG00000027899) MMP17 (ENSDCDG00000027898) ULK1 (ENSDCDG00000027342) pus1 (ENSDCDG00000027334) noc4l (ENSDCDG00000027327) vps29 (ENSDCDG00000027301) gpn3 (ENSDCDG00000027296) arpc3 (ENSDCDG00000027293) ENSDCDG00000027289 ATP2A1 (ENSDCDG00000026929) BCR (ENSDCDG00000023774) SPECC1L (ENSDCDG00000023391) ADORA2A (ENSDCDG00000023384) snrpd3l (ENSDCDG00000023379) ENSDCDG00000023376 pgam2 (ENSDCDG00000023371) ##22 ENSDCDG00000023361 crkl (ENSDCDG00000023353) ENSDCDG00000023350 med15 (ENSDCDG00000023345) si:ch211-222n4.2 (ENSDCDG00000023341) smpd4 (ENSDCDG00000023292) TMEM132C (ENSDCDG00000023286) ENSDCDG00000023285 ENSDCDG00000023282 RIMBP2 (ENSDCDG00000023250) stx2a (ENSDCDG00000023238) ENSDCDG00000023232 ENSDCDG00000023227 ENSDCDG00000023225 ENSDCDG00000023223 Atlantic herring MODERN SPECIES 3 LRRTM4 (ENSCHAG00000018372) ENSCHAG00000018355 ENSCHAG00000017417 c7b (ENSCHAG00000015098) c6 (ENSCHAG00000014259) rgs7bpb (ENSCHAG00000014219) rnf180b (ENSCHAG00000014210) ENSCHAG00000014203 ndr1 (ENSCHAG00000014198) eif4ebp1 (ENSCHAG00000014175) ENSCHAG00000014170 ANK1 (ENSCHAG00000011691) ftsj1 (ENSCHAG00000011598) nefma (ENSCHAG00000011577) NEFL (ENSCHAG00000011569) pgam2 (ENSCHAG00000011550) ##22 ENSCHAG00000011489 crkl (ENSCHAG00000011467) med15 (ENSCHAG00000011210) si:ch211-222n4.2 (ENSCHAG00000011195) smpd4 (ENSCHAG00000010719) TMEM132C (ENSCHAG00000010691) ENSCHAG00000010683 RIMBP2 (ENSCHAG00000010647) ENSCHAG00000010572 sfswap (ENSCHAG00000010553) MMP17 (ENSCHAG00000010327) ULK1 (ENSCHAG00000010098) pus1 (ENSCHAG00000010080) noc4l (ENSCHAG00000009522) vps29 (ENSCHAG00000010020) Osteoglossiformes ANCESTRAL SPECIES 265 ENSGT00940000159105.f ENSGT01030000234527.A.a.b.a.a.a ENSGT00390000013415.a.b.jb ENSGT00950000182864.a.b.b.a.a ENSGT00940000154909.a.a ENSGT00940000154909.a.b ENSGT00940000154909.b.a.b ENSGT00940000166792 ENSGT00940000165076.b ENSGT00730000111146 ENSGT00940000161685.A.a ENSGT00940000156208.i.b ENSGT00950000182926.b.c ##22 ENSGT00820000127055.b.a.a ENSGT00730000111140 ENSGT00940000167368 ENSGT00390000006044 ENSGT00940000154702.a.b ENSGT00950000183200.A.a.b.b ENSGT00950000183203.c.a.f ENSGT00940000153892.B ENSGT00940000158699.d P. kingsleyae MODERN SPECIES 439 ENSPKIG00000019440 LRRTM4 (ENSPKIG00000019427) ENSPKIG00000019405 ENSPKIG00000019377 ftsj1 (ENSPKIG00000019318) nefma (ENSPKIG00000019288) NEFL (ENSPKIG00000019266) pgam2 (ENSPKIG00000019244) ##22 ENSPKIG00000019214 ENSPKIG00000019194 ENSPKIG00000019164 crkl (ENSPKIG00000019123) ENSPKIG00000019016 smpd4 (ENSPKIG00000018865) Asian bonytongue MODERN SPECIES 21 ENSSFOG00015005872 ENSSFOG00015005896 tmem230b (ENSSFOG00015026560) ADRA1A (ENSSFOG00015005994) DPYSL2 (ENSSFOG00015006019) bnip3lb (ENSSFOG00015006084) ppp2r2ab (ENSSFOG00015029148) LRRTM4 (ENSSFOG00015006160) LRRTM4 (ENSSFOG00015006167) ENSSFOG00015006182 ENSSFOG00015006222 ftsj1 (ENSSFOG00015006275) ENSSFOG00015025755 nefma (ENSSFOG00015006356) neflb (ENSSFOG00015006373) pgam2 (ENSSFOG00015006398) ##22 CRKL (ENSSFOG00015033051) ENSSFOG00015006643 med15 (ENSSFOG00015024292) si:ch211-222n4.2 (ENSSFOG00015030951) smpd4 (ENSSFOG00015006764) TMEM132C (ENSSFOG00015006851) ENSSFOG00015006919 RIMBP2 (ENSSFOG00015000669) ENSSFOG00015000743 ENSSFOG00015032178 ENSSFOG00015030311 sfswap (ENSSFOG00015000766) MMP17 (ENSSFOG00015000784) noc4l (ENSSFOG00015000842) ENSSFOG00015029597 Spotted gar MODERN SPECIES 647 igf2r (ENSLOCG00000015707) si:ch73-111k22.2 (ENSLOCG00000015705) ENSLOCG00000015704 fez2b (ENSLOCG00000015700) riox1 (ENSLOCG00000015694) ENSLOCG00000015692 snu13a (ENSLOCG00000017988) ENSLOCG00000017987 ftsj1 (ENSLOCG00000015688) ENSLOCG00000015687 dock5 (ENSLOCG00000015676) ENSLOCG00000015675 ENSLOCG00000017986 NEFM (ENSLOCG00000015673) neflb (ENSLOCG00000015672) pgam2 (ENSLOCG00000015670) ##22 gmcl1 (ENSLOCG00000015668) ENSLOCG00000015667 tgfa (ENSLOCG00000015665) fam136a (ENSLOCG00000015664) snrpg (ENSLOCG00000015662) pcyox1 (ENSLOCG00000015660) ENSLOCG00000015658 plpbp (ENSLOCG00000015656) ENSLOCG00000015653 dusp2 (ENSLOCG00000015652) ENSLOCG00000015649 ENSLOCG00000015648 adra2b (ENSLOCG00000015645) gpat2 (ENSLOCG00000015643) FAHD2B (ENSLOCG00000015640) Reedfish MODERN SPECIES ENSECRG00000000192 ENSECRG00000000193 ENSECRG00000000194 ENSECRG00000000196 rassf2b (ENSECRG00000000197) SLC23A2 (ENSECRG00000000198) ENSECRG00000000199 pcna (ENSECRG00000000200) KCNIP3 (ENSECRG00000000201) zgc:152830 (ENSECRG00000000202) FAHD2A (ENSECRG00000000203) gpat2 (ENSECRG00000000204) adra2b (ENSECRG00000000205) ENSECRG00000000206 dusp2 (ENSECRG00000000207) pgam2 (ENSECRG00000000208) ##22 gmcl1 (ENSECRG00000000209) tgfa (ENSECRG00000000210) fam136a (ENSECRG00000000211) snrpg (ENSECRG00000000212) pcyox1 (ENSECRG00000000213) tmem150aa (ENSECRG00000000214) rnf181 (ENSECRG00000000215) vamp8 (ENSECRG00000000216) ncaph (ENSECRG00000000217) pum3 (ENSECRG00000000218) ENSECRG00000000219 ENSECRG00000000220 ENSECRG00000000221 mrps24 (ENSECRG00000000222) nudcd3 (ENSECRG00000000223) Sarcopterygii ANCESTRAL SPECIES ENSGT00950000182926.b.c ##22 Coelacanth MODERN SPECIES 244 SNRPG (ENSLACG00000017900) PCYOX1 (ENSLACG00000017877) TIA1 (ENSLACG00000017828) C2orf42 (ENSLACG00000017805) ENSLACG00000017769 zgc:65851 (ENSLACG00000017637) MXD1 (ENSLACG00000017438) SNRNP27 (ENSLACG00000017387) ADD2 (ENSLACG00000017281) ENSLACG00000017151 HK2 (ENSLACG00000016947) ENSLACG00000016676 ENSLACG00000016571 ZMIZ2 (ENSLACG00000015641) ENSLACG00000015459 PGAM2 (ENSLACG00000015180) ##22 ENSLACG00000014763 NUDCD3 (ENSLACG00000014354) CAMK2B (ENSLACG00000012089) MRPS24 (ENSLACG00000011763) ENSLACG00000011344 SLC20A1 (ENSLACG00000010827) NT5DC4 (ENSLACG00000009174) ENSLACG00000008987 ENSLACG00000006615 PAX8 (ENSLACG00000003762) Tetrapoda ANCESTRAL SPECIES 61 ENSGT00940000157038 ENSGT00940000160915 ENSGT00940000156732 ENSGT00390000009488 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164 ENSGT00940000159904 ENSGT00550000074946 ENSGT00940000159012 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT01100000266316 ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000155061.b ENSGT00940000161976 ENSGT00940000161868 ENSGT00940000161711 ENSGT00390000007992 ENSGT00390000001901 ENSGT01030000234578.A.b.a.a.b Anura ANCESTRAL SPECIES 30 ENSGT00940000157038 ENSGT00940000160915 ENSGT00940000156732 ENSGT00390000009488 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164 ENSGT00940000159904 ENSGT00550000074946 ENSGT00940000159012 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00940000156008.pb.a ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT01070000257222 ENSGT00950000182943 ENSGT00940000155061.b ENSGT00940000161868 ENSGT00940000161711 ENSGT00390000007992 ENSGT00390000001901 ENSGT01030000234578.A.b.a.a.b Leishan spiny toad MODERN SPECIES 6 ELMOD3 (ENSLLEG00000009456) ENSLLEG00000009398 AEBP1 (ENSLLEG00000009211) POLD2 (ENSLLEG00000008939) MYL7 (ENSLLEG00000008812) GCK (ENSLLEG00000008634) YKT6 (ENSLLEG00000008362) ENSLLEG00000008282 NPC1L1 (ENSLLEG00000008095) DDX56 (ENSLLEG00000008007) TMED4 (ENSLLEG00000007933) OGDH (ENSLLEG00000007575) ZMIZ2 (ENSLLEG00000007415) ENSLLEG00000007377 ENSLLEG00000007351 ENSLLEG00000007270 ##22 ENSLLEG00000007253 NUDCD3 (ENSLLEG00000007221) ENSLLEG00000007205 CAMK2B (ENSLLEG00000005795) MRPS24 (ENSLLEG00000005619) SLC20A1 (ENSLLEG00000005530) NT5DC4 (ENSLLEG00000005378) CKAP2L (ENSLLEG00000005273) ENSLLEG00000005192 ENSLLEG00000005133 ENSLLEG00000005103 ENSLLEG00000005078 ENSLLEG00000005060 ENSLLEG00000005004 ENSLLEG00000004966 Frog MODERN SPECIES 3 dbnl (ENSXETG00000019013) elmod3 (ENSXETG00000019012) aebp1 (ENSXETG00000032698) kcnk5 (ENSXETG00000019007) spata18a (ENSXETG00000019005) myl7 (ENSXETG00000019004) gck (ENSXETG00000019003) ykt6 (ENSXETG00000019002) npc1l1 (ENSXETG00000019001) ddx56 (ENSXETG00000019000) tmed4 (ENSXETG00000018999) ogdh (ENSXETG00000018997) zmiz2 (ENSXETG00000018991) ppia (ENSXETG00000018981) ENSXETG00000036135 pgam2 (ENSXETG00000018980) ##22 ENSXETG00000039060 nudcd3 (ENSXETG00000018972) camk2b (ENSXETG00000018971) mrps24 (ENSXETG00000018967) slc20a1 (ENSXETG00000018957) nt5dc4 (ENSXETG00000018955) ckap2l (ENSXETG00000041090) ENSXETG00000041755 ENSXETG00000041287 il1b (ENSXETG00000001276) psd4 (ENSXETG00000001273) pax8 (ENSXETG00000001272) sftpb (ENSXETG00000032549) usp39 (ENSXETG00000001269) c2orf68 (ENSXETG00000025802) Amniota ANCESTRAL SPECIES 100 ENSGT00940000159904 ENSGT00550000074946 ENSGT00940000159012 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000156732 ENSGT00940000160915 Sauria ANCESTRAL SPECIES 27 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.a ENSGT00950000182943.kb.b.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 ENSGT00390000009488 Archelosauria ANCESTRAL SPECIES 29 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00610000087417 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 Cryptodira ANCESTRAL SPECIES 30 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.a ENSGT00950000182943.kb.b.a.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00610000087417 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00390000009488 ENSGT00940000161915 Testudinoidea ANCESTRAL SPECIES ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.a ENSGT00950000182943.kb.b.a.a.b ENSGT01000000217133 ENSGT00950000182943.kb.b.a.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000154187.a.a Emydidae ANCESTRAL SPECIES ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.a ENSGT00950000182943.kb.b.a.a.b ENSGT01000000217133 ENSGT00950000182943.kb.b.a.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000154187.a.a Three-toed box turtle DUPLICATION Three-toed box turtle DUPLICATION Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2676 ENSTMTG00000012616 ##22 Three-toed box turtle MODERN SPECIES 2688 ENSTMTG00000012754 ##22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2687 ENSTMTG00000012743 ##22 Three-toed box turtle MODERN SPECIES 2675 ENSTMTG00000012600 ##22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2677 ENSTMTG00000012635 ##22 Three-toed box turtle MODERN SPECIES 2689 ENSTMTG00000012765 ##22 painted turtle MODERN SPECIES 703 TRIQK (ENSCPBG00000003013) ENSCPBG00000002997 RUNX1T1 (ENSCPBG00000002973) SLC26A7 (ENSCPBG00000002908) ENSCPBG00000002878 OTUD6B (ENSCPBG00000002864) PIP4P2 (ENSCPBG00000002850) C8orf88 (ENSCPBG00000002825) NECAB1 (ENSCPBG00000002796) TMEM64 (ENSCPBG00000002776) CDH10 (ENSCPBG00000002731) ENSCPBG00000002716 OGDH (ENSCPBG00000002653) ZMIZ2 (ENSCPBG00000002557) ENSCPBG00000002513 PGAM2 (ENSCPBG00000002504) ##22 ENSCPBG00000002499 Testudinidae ANCESTRAL SPECIES 55 ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.kb.a ENSGT00950000182943.kb.b.a.a.b ENSGT01000000217133 ENSGT00950000182943.kb.b.a.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000154187.a.a Abingdon island giant tortoise MODERN SPECIES 367 OGDH (ENSCABG00000011759) ZMIZ2 (ENSCABG00000011764) ENSCABG00000011772 PGAM2 (ENSCABG00000011796) ##22 ENSCABG00000011811 Goode s thornscrub tortoise MODERN SPECIES 11 IL36RN (ENSGEVG00005001146) ENSGEVG00005001125 TMED4 (ENSGEVG00005001113) DDX56 (ENSGEVG00005001091) NPC1L1 (ENSGEVG00005001011) MRPS24 (ENSGEVG00005000963) SLC20A1 (ENSGEVG00005000937) NT5DC4 (ENSGEVG00005000883) CKAP2L (ENSGEVG00005000846) ENSGEVG00005000819 ENSGEVG00005000805 ENSGEVG00005000795 OGDH (ENSGEVG00005000746) ZMIZ2 (ENSGEVG00005000698) ENSGEVG00005000684 PGAM2 (ENSGEVG00005000671) ##22 ENSGEVG00005000661 CDH10 (ENSGEVG00005000637) ENSGEVG00005000595 ENSGEVG00005000582 ENSGEVG00005000572 ENSGEVG00005000556 CDH12 (ENSGEVG00005000540) CDH18 (ENSGEVG00005000511) BASP1 (ENSGEVG00005000485) MYO10 (ENSGEVG00005000330) RETREG1 (ENSGEVG00005000289) ZNF622 (ENSGEVG00005000274) MARCHF11 (ENSGEVG00005000252) FBXL7 (ENSGEVG00005000212) ANKH (ENSGEVG00005000152) Archosauria ANCESTRAL SPECIES ENSGT00950000182926.b.c ##22 Australian saltwater crocodile MODERN SPECIES 51 ENSCPRG00005016213 ENSCPRG00005016272 ENSCPRG00005016278 AAK1 (ENSCPRG00005016287) ENSCPRG00005016291 GFPT1 (ENSCPRG00005016297) ANTXR1 (ENSCPRG00005016303) GKN1 (ENSCPRG00005016314) GKN2 (ENSCPRG00005016328) PGAM2 (ENSCPRG00005016337) ##22 BMP10 (ENSCPRG00005016340) ARHGAP25 (ENSCPRG00005016346) CDS2 (ENSCPRG00005016351) PCNA (ENSCPRG00005016357) TMEM230 (ENSCPRG00005016358) SLC23A2 (ENSCPRG00005016364) RASSF2 (ENSCPRG00005016383) PRNP (ENSCPRG00005016388) LRRTM4 (ENSCPRG00005016394) ENSCPRG00005016401 TIA1 (ENSCPRG00005016407) C2orf42 (ENSCPRG00005016412) ENSCPRG00005016416 MXD1 (ENSCPRG00005016437) SNRNP27 (ENSCPRG00005016441) Lepidosauria ANCESTRAL SPECIES 20 ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.a ENSGT00950000182943.kb.b.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613 ENSGT00390000009488 tuatara MODERN SPECIES 704 PSD4 (ENSSPUG00000000840) ENSSPUG00000000834 ENSSPUG00000000825 IL36RN (ENSSPUG00000000818) ENSSPUG00000000811 TMED4 (ENSSPUG00000000791) DDX56 (ENSSPUG00000000784) NPC1L1 (ENSSPUG00000000641) MRPS24 (ENSSPUG00000000628) SLC20A1 (ENSSPUG00000000609) NT5DC4 (ENSSPUG00000000379) CKAP2L (ENSSPUG00000000352) ENSSPUG00000000345 OGDH (ENSSPUG00000000282) ENSSPUG00000000087 ENSSPUG00000000014 ##22 NUDCD3 (ENSSPUG00000018880) CAMK2B (ENSSPUG00000018871) YKT6 (ENSSPUG00000018864) GCK (ENSSPUG00000018858) MYL7 (ENSSPUG00000018849) POLD2 (ENSSPUG00000018846) CAPG (ENSSPUG00000018830) Episquamata ANCESTRAL SPECIES 12 ENSGT00390000014666.a ENSGT00390000014618.b ENSGT00940000161817 ENSGT00950000182815.a.a.b ENSGT00940000158107 ENSGT00940000159152.d ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182943.kb.b.a.a.d ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613.v ENSGT00390000017613.u Laterata ANCESTRAL SPECIES 15 ENSGT00390000014666.a ENSGT00390000014618.b ENSGT00940000161817 ENSGT00950000182815.a.a.b ENSGT00940000158107 ENSGT00940000159152.d ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182943.kb.b.a.a.d ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000183087.B ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613.v ENSGT00390000017613.u Common wall lizard MODERN SPECIES 6 UNC5D (ENSPMRG00000018363) KCNU1 (ENSPMRG00000018335) ENSPMRG00000018326 ZNF703 (ENSPMRG00000018320) ERLIN2 (ENSPMRG00000018305) PLPBP (ENSPMRG00000018295) ADGRA2 (ENSPMRG00000018224) ENSPMRG00000018203 ENSPMRG00000018193 OGDH (ENSPMRG00000018166) ENSPMRG00000018154 ENSPMRG00000018134 ENSPMRG00000018126 ZMIZ2 (ENSPMRG00000018113) ENSPMRG00000018099 PGAM2 (ENSPMRG00000018089) ##22 ENSPMRG00000018085 NUDCD3 (ENSPMRG00000018077) ENSPMRG00000018072 CAMK2B (ENSPMRG00000017756) YKT6 (ENSPMRG00000017605) GCK (ENSPMRG00000017579) MYL7 (ENSPMRG00000017569) POLD2 (ENSPMRG00000017556) AEBP1 (ENSPMRG00000017538) CAPG (ENSPMRG00000017524) ENSPMRG00000017517 ENSPMRG00000017512 DBNL (ENSPMRG00000017499) TCF7L1 (ENSPMRG00000017473) ENSPMRG00000017459 Argentine black and white tegu MODERN SPECIES 42 SCN2B (ENSSMRG00000021883) SCN4B (ENSSMRG00000021882) TMPRSS4 (ENSSMRG00000021863) ENSSMRG00000021862 TMPRSS13 (ENSSMRG00000021861) FXYD6 (ENSSMRG00000021860) ENSSMRG00000021859 DSCAML1 (ENSSMRG00000021825) CEP164 (ENSSMRG00000021823) ENSSMRG00000021822 ENSSMRG00000021821 ENSSMRG00000021820 OGDH (ENSSMRG00000021819) ZMIZ2 (ENSSMRG00000021818) ENSSMRG00000021817 PGAM2 (ENSSMRG00000021816) ##22 NUDCD3 (ENSSMRG00000021815) CAMK2B (ENSSMRG00000021813) YKT6 (ENSSMRG00000021811) GCK (ENSSMRG00000021806) MYL7 (ENSSMRG00000021804) GOT1L1 (ENSSMRG00000021799) ADRB3 (ENSSMRG00000021797) ENSSMRG00000021763 EIF4EBP1 (ENSSMRG00000021761) ENSSMRG00000021760 ASH2L (ENSSMRG00000021759) STAR (ENSSMRG00000021757) ENSSMRG00000021754 LSM1 (ENSSMRG00000021753) BAG4 (ENSSMRG00000021751) Toxicofera ANCESTRAL SPECIES 20 ENSGT00390000014666.a ENSGT00390000014618.b ENSGT00940000161817 ENSGT00950000182815.a.a.b ENSGT00940000158107 ENSGT00940000159152.d ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182943.kb.b.a.a.d.a.b ENSGT00950000182943.kb.b.a.a.d.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038 ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000017613.v ENSGT00390000017613.u Lizard DUPLICATION Lizard MODERN SPECIES 3 NHLRC1 (ENSACAG00000003390) KIF13A (ENSACAG00000003398) ENSACAG00000039776 SIRT5 (ENSACAG00000003538) ENSACAG00000003604 MCUR1 (ENSACAG00000003648) ENSACAG00000003668 CD83 (ENSACAG00000036337) JARID2 (ENSACAG00000003669) DTNBP1 (ENSACAG00000003762) MYLIP (ENSACAG00000003816) GMPR (ENSACAG00000003844) ATXN1 (ENSACAG00000003919) ENSACAG00000042775 ENSACAG00000040272 ENSACAG00000036935 ##22 ENSACAG00000044296 RBM24 (ENSACAG00000003962) CAP2 (ENSACAG00000003976) FAM8A1 (ENSACAG00000038018) NUP153 (ENSACAG00000004118) ENSACAG00000004205 ENSACAG00000004251 ENSACAG00000041173 GFOD1 (ENSACAG00000043438) ENSACAG00000004331 PHACTR1 (ENSACAG00000004337) ENSACAG00000031093 MYO10 (ENSACAG00000000351) RETREG1 (ENSACAG00000000324) ENSACAG00000036779 Lizard MODERN SPECIES 852 MAK16 (ENSACAG00000000888) ENSACAG00000000930 ENSACAG00000037047 ENSACAG00000001266 ENSACAG00000001472 ENSACAG00000045225 ENSACAG00000001497 ENSACAG00000040862 ENSACAG00000035425 ENSACAG00000038670 ENSACAG00000001501 ENSACAG00000044106 ENSACAG00000001508 ENSACAG00000043480 ENSACAG00000001877 ENSACAG00000002010 ##22 ENSACAG00000039141 NUDCD3 (ENSACAG00000002043) PPIA (ENSACAG00000036521) CAMK2B (ENSACAG00000012012) YKT6 (ENSACAG00000011947) GCK (ENSACAG00000011822) MYL7 (ENSACAG00000043660) ENSACAG00000043719 POLD2 (ENSACAG00000011710) AEBP1 (ENSACAG00000022067) ENSACAG00000011605 ENSACAG00000022415 ENSACAG00000011504 ENSACAG00000011398 ENSACAG00000043703 Elapidae ANCESTRAL SPECIES 15 ENSGT00390000014666.a ENSGT00390000014618.b ENSGT00940000161817 ENSGT00950000182815.a.a.b.c ENSGT00940000158107 ENSGT00940000159152.d ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182943.kb.b.a.a.d.a.b ENSGT00950000182943.kb.b.a.a.d.a.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038.g ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000009488 ENSGT00390000017627.b Indian cobra MODERN SPECIES 7 ENSNNAG00000004515 ENSNNAG00000004533 ENSNNAG00000004553 DUSP26 (ENSNNAG00000004573) RNF122 (ENSNNAG00000004587) TTI2 (ENSNNAG00000004632) MAK16 (ENSNNAG00000004656) SLC18A1 (ENSNNAG00000004737) ATP6V1B2 (ENSNNAG00000004869) LZTS1 (ENSNNAG00000004911) ENSNNAG00000004932 ENSNNAG00000004964 OGDH (ENSNNAG00000004998) ZMIZ2 (ENSNNAG00000005151) ENSNNAG00000005219 PGAM2 (ENSNNAG00000005235) ##22 NUDCD3 (ENSNNAG00000005265) CAMK2B (ENSNNAG00000005316) YKT6 (ENSNNAG00000005418) GCK (ENSNNAG00000005437) ENSNNAG00000005486 MYL7 (ENSNNAG00000005496) POLD2 (ENSNNAG00000005514) AEBP1 (ENSNNAG00000005639) CAPG (ENSNNAG00000006230) ENSNNAG00000006283 DBNL (ENSNNAG00000006390) TCF7L1 (ENSNNAG00000006454) ENSNNAG00000006482 ENSNNAG00000006608 ELMOD3 (ENSNNAG00000006637) Elapidae_a ANCESTRAL SPECIES 42 ENSGT00390000014666.a ENSGT00390000014618.b ENSGT00940000161817 ENSGT00950000182815.a.a.b.c ENSGT00940000158107 ENSGT00940000159152.d ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182943.kb.b.a.a.d.a.b ENSGT00950000182943.kb.b.a.a.d.a.a.a ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00390000012138.a.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038.g ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000009488 Acanthophiinae ANCESTRAL SPECIES 54 ENSGT00390000014618.b ENSGT00940000161817 ENSGT00950000182815.a.a.b.c ENSGT00940000158107 ENSGT00940000159152.d ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000159352 ENSGT00940000155068.b ENSGT00940000154078.a.b ENSGT00950000182943.kb.b.a.a.d.a.b ENSGT00950000182943.kb.b.a.a.d.a.a.a ENSGT00990000213324 ENSGT00950000183125.b.a.a ENSGT01030000234539.b.b.a ENSGT00950000182926.b.c ##22 ENSGT00940000166166 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00390000012138.a.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000159305 ENSGT00940000156732 ENSGT00940000157038.g ENSGT00530000064712 ENSGT00940000164699 ENSGT00390000009488 Mainland tiger snake MODERN SPECIES 37 RNF122 (ENSNSUG00000002252) TTI2 (ENSNSUG00000002256) MAK16 (ENSNSUG00000002288) SLC18A1 (ENSNSUG00000002290) ATP6V1B2 (ENSNSUG00000002295) LZTS1 (ENSNSUG00000002356) ENSNSUG00000002359 ENSNSUG00000002361 ENSNSUG00000002363 ENSNSUG00000002365 ENSNSUG00000002367 OGDH (ENSNSUG00000002373) ENSNSUG00000003325 ZMIZ2 (ENSNSUG00000003327) ENSNSUG00000003331 ENSNSUG00000003332 ##22 ENSNSUG00000003333 NUDCD3 (ENSNSUG00000003353) CAMK2B (ENSNSUG00000003357) YKT6 (ENSNSUG00000003384) GCK (ENSNSUG00000003385) ENSNSUG00000003390 MYL7 (ENSNSUG00000003392) POLD2 (ENSNSUG00000003394) AEBP1 (ENSNSUG00000003406) CAPG (ENSNSUG00000003457) ENSNSUG00000003461 ENSNSUG00000003481 ENSNSUG00000003484 TCF7L1 (ENSNSUG00000003494) ENSNSUG00000003665 Eastern brown snake MODERN SPECIES 101 DUSP26 (ENSPTXG00000010565) RNF122 (ENSPTXG00000010564) TTI2 (ENSPTXG00000010562) MAK16 (ENSPTXG00000010561) SLC18A1 (ENSPTXG00000010560) ATP6V1B2 (ENSPTXG00000010559) LZTS1 (ENSPTXG00000010558) ENSPTXG00000010557 ENSPTXG00000010556 ENSPTXG00000010555 ENSPTXG00000010554 OGDH (ENSPTXG00000010553) ZMIZ2 (ENSPTXG00000010552) ENSPTXG00000010551 ENSPTXG00000010550 ##22 NUDCD3 (ENSPTXG00000010549) CAMK2B (ENSPTXG00000010541) YKT6 (ENSPTXG00000010537) GCK (ENSPTXG00000010531) MYL7 (ENSPTXG00000010530) POLD2 (ENSPTXG00000010529) AEBP1 (ENSPTXG00000010527) CAPG (ENSPTXG00000010524) ENSPTXG00000010521 DBNL (ENSPTXG00000010518) TCF7L1 (ENSPTXG00000010517) ENSPTXG00000010515 ENSPTXG00000010511 ELMOD3 (ENSPTXG00000010509) ENSPTXG00000010507 Blue-lipped sea krait MODERN SPECIES 3587 PGAM2 (ENSLLTG00000002198) ##22 Mammalia ANCESTRAL SPECIES 67 ENSGT00950000183087.A.b.b ENSGT00950000183087.B ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a ENSGT00940000161976 ENSGT00940000161868 ENSGT00940000161711 Platypus MODERN SPECIES 2 RPUSD4 (ENSOANG00000007247) FAM118B (ENSOANG00000046124) SRPRA (ENSOANG00000051121) FOXRED1 (ENSOANG00000001155) ENSOANG00000048675 ENSOANG00000045551 ENSOANG00000037431 ENSOANG00000043306 ENSOANG00000012105 ENSOANG00000003450 ENSOANG00000006506 MYL7 (ENSOANG00000006505) POLD2 (ENSOANG00000006504) AEBP1 (ENSOANG00000006502) POLM (ENSOANG00000042350) ENSOANG00000041307 ##22 DBNL (ENSOANG00000000599) ENSOANG00000046797 ENSOANG00000048107 ENSOANG00000037773 SLC20A1 (ENSOANG00000003390) NT5DC4 (ENSOANG00000012006) ENSOANG00000011171 ENSOANG00000044856 ENSOANG00000005197 ENSOANG00000010546 ENSOANG00000010547 ENSOANG00000040315 ENSOANG00000010549 ENSOANG00000041181 ENSOANG00000041011 Theria ANCESTRAL SPECIES 13 ENSGT00950000183087.A.b.b ENSGT00950000183087.B ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00950000182943.kb.b.b.a ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a ENSGT00940000161976 ENSGT00940000161868 Marsupialia ANCESTRAL SPECIES 17 ENSGT00390000004554 ENSGT00940000156939 ENSGT00390000004596 ENSGT00940000160309 ENSGT00390000013928 ENSGT00940000162283 ENSGT00940000154022.a.a ENSGT00940000157918 ENSGT00390000004913 ENSGT00940000154285.b.b ENSGT00940000160843 ENSGT00940000161359 ENSGT00940000162037 ENSGT00940000156753.b ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00950000182943.kb.b.b.a.c.a.a ENSGT00950000182943.kb.b.b.a.d.a ENSGT00950000182943.kb.b.b.a.c.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a Opossum MODERN SPECIES ZNF319 (ENSMODG00000023065) TEPP (ENSMODG00000014064) ENSMODG00000014063 KIFC3 (ENSMODG00000014047) KATNB1 (ENSMODG00000014037) DRC7 (ENSMODG00000014032) ENSMODG00000014021 ADGRG1 (ENSMODG00000014011) ENSMODG00000014001 ENSMODG00000013954 ENSMODG00000023063 ENSMODG00000051193 ENSMODG00000046760 ENSMODG00000043486 POLM (ENSMODG00000013922) PGAM2 (ENSMODG00000013911) ##22 DBNL (ENSMODG00000013906) ENSMODG00000047112 ENSMODG00000023062 ENSMODG00000013889 SLC20A1 (ENSMODG00000013886) NT5DC4 (ENSMODG00000013862) ENSMODG00000013858 ENSMODG00000013821 ENSMODG00000013815 ENSMODG00000013808 ENSMODG00000013803 ENSMODG00000013799 ENSMODG00000037505 ENSMODG00000036976 IL36RN (ENSMODG00000013795) Marsupialia_b ANCESTRAL SPECIES 19 ENSGT00390000004554 ENSGT00940000156939 ENSGT00390000004596 ENSGT00940000160309 ENSGT00390000013928 ENSGT00940000162283 ENSGT00940000154022.a.a ENSGT00940000157918 ENSGT00390000004913 ENSGT00940000154285.b.b ENSGT00940000160843 ENSGT00940000161359 ENSGT01020000234468 ENSGT01100000264428 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00950000182943.kb.b.b.a.c.a.a ENSGT00950000182943.kb.b.b.a.d.a ENSGT00950000182943.kb.b.b.a.c.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a Diprotodontia ANCESTRAL SPECIES 13 ENSGT00390000004554 ENSGT00940000156939 ENSGT00390000004596 ENSGT00940000160309 ENSGT00390000013928 ENSGT00940000162283 ENSGT00940000154022.a.a ENSGT00940000157918 ENSGT00390000004913 ENSGT00940000154285.b.b ENSGT00940000160843 ENSGT00940000161359 ENSGT01020000234468 ENSGT01100000264428 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.b.b.a.c.a.a ENSGT00950000182943.kb.b.b.a.d.a ENSGT00950000182943.kb.b.b.a.c.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a ENSGT00940000161976 Diprotodontia_a ANCESTRAL SPECIES 14 ENSGT00940000156939 ENSGT00390000004596 ENSGT00940000160309 ENSGT00390000013928 ENSGT00940000162283 ENSGT00940000154022.a.a ENSGT00940000157918 ENSGT00390000004913 ENSGT00940000154285.b.b ENSGT00940000160843 ENSGT00940000161359 ENSGT01020000234468 ENSGT00940000156753.a.a.b ENSGT01100000264428 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000014879.c.a ENSGT00940000162631 ENSGT00530000063691.a ENSGT00950000182943.jb ENSGT00950000182943.kb.b.b.a.c.a.a.b.a ENSGT00950000182943.kb.b.b.a.c.a.a.a ENSGT00950000182943.kb.b.b.a.d.a ENSGT00950000182943.kb.b.b.a.c.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a koala MODERN SPECIES 146 TEPP (ENSPCIG00000007125) ENSPCIG00000007118 KIFC3 (ENSPCIG00000007108) KATNB1 (ENSPCIG00000007102) DRC7 (ENSPCIG00000008593) ENSPCIG00000032443 ADGRG3 (ENSPCIG00000016187) ADGRG1 (ENSPCIG00000016189) ENSPCIG00000022759 ENSPCIG00000001328 ENSPCIG00000008413 ENSPCIG00000012984 ENSPCIG00000012982 ENSPCIG00000032656 POLM (ENSPCIG00000002853) PGAM2 (ENSPCIG00000002837) ##22 ENSPCIG00000002818 ENSPCIG00000019204 URGCP (ENSPCIG00000019203) MRPS24 (ENSPCIG00000019201) SLC20A1 (ENSPCIG00000000596) NT5DC4 (ENSPCIG00000000629) ENSPCIG00000036262 ENSPCIG00000019173 ENSPCIG00000013144 ENSPCIG00000035147 ENSPCIG00000005687 ENSPCIG00000033104 ENSPCIG00000019853 IL36RN (ENSPCIG00000031417) IL1F10 (ENSPCIG00000032584) Common wonbat MODERN SPECIES 990 ENSVURG00010008676 POLM (ENSVURG00010008682) PGAM2 (ENSVURG00010008688) ##22 DBNL (ENSVURG00010008693) ENSVURG00010008706 URGCP (ENSVURG00010008718) MRPS24 (ENSVURG00010008733) SLC20A1 (ENSVURG00010008738) NT5DC4 (ENSVURG00010008747) ENSVURG00010008765 ENSVURG00010008784 ENSVURG00010008793 Wallaby MODERN SPECIES 7071 ENSMEUG00000012922 PGAM2 (ENSMEUG00000012920) ##22 Tasmanian devil MODERN SPECIES 1 USB1 (ENSSHAG00000024120) ZNF319 (ENSSHAG00000031600) TEPP (ENSSHAG00000007313) ENSSHAG00000024794 KIFC3 (ENSSHAG00000031697) KATNB1 (ENSSHAG00000022649) DRC7 (ENSSHAG00000006675) ENSSHAG00000006225 ENSSHAG00000005146 ENSSHAG00000003822 ENSSHAG00000029230 ENSSHAG00000001828 ENSSHAG00000001442 ENSSHAG00000024438 ENSSHAG00000002674 PGAM2 (ENSSHAG00000003170) ##22 DBNL (ENSSHAG00000003404) UBE2D4 (ENSSHAG00000024831) ENSSHAG00000005460 ENSSHAG00000020918 ENSSHAG00000031402 NT5DC4 (ENSSHAG00000007640) ENSSHAG00000024240 ENSSHAG00000007933 ENSSHAG00000008360 ENSSHAG00000008907 ENSSHAG00000027329 ENSSHAG00000010472 ENSSHAG00000010571 IL1F10 (ENSSHAG00000024364) ENSSHAG00000028511 Eutheria ANCESTRAL SPECIES 1 ENSGT00950000183087.A.a.b.a ENSGT00950000183087.B ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00950000183087.A.a.b.b ENSGT00950000183087.B ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Laurasiatheria ANCESTRAL SPECIES 29 ENSGT00950000183087.A.a.b.b ENSGT00950000183087.B ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Eulipotyphla ANCESTRAL SPECIES 1715 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 Hedgehog MODERN SPECIES 3350 PGAM2 (ENSEEUG00000003746) ##22 DBNL (ENSEEUG00000003696) Common shrew DUPLICATION Common shrew MODERN SPECIES 7657 PGAM2 (ENSSARG00000011298) ##22 Common shrew MODERN SPECIES 11677 ENSSARG00000006705 ##22 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000157781 ENSGT00940000161703 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000157781 ENSGT00940000161703 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000157781 ENSGT00940000161703 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Cetacea ANCESTRAL SPECIES 13 ENSGT00940000157781 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909.j ENSGT00530000063608.A ENSGT00390000017589.d ENSGT00940000160556 ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00490000044045 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Odontoceti ANCESTRAL SPECIES 12 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909.j ENSGT00530000063608.A ENSGT00390000015714.x ENSGT00390000017589.d ENSGT00940000160556 ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821.g.b ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00490000044045 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909.j ENSGT00530000063608.A ENSGT00390000015714.x ENSGT00390000017589.d ENSGT00940000160556 ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821.g.b ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00490000044045 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909.j ENSGT00530000063608.A ENSGT00390000015714.x ENSGT00390000017589.d ENSGT00940000160556 ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821.g.b ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00490000044045 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 ENSGT00950000183162.a.b Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000157781 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909.j ENSGT00530000063608.A ENSGT00390000017589.d ENSGT00940000160556 ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821.g.b ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00490000044045 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 ENSGT00950000183162.a.b Narwhal MODERN SPECIES 306 VWC2 (ENSMMNG00015009001) ZPBP (ENSMMNG00015009014) SPATA48 (ENSMMNG00015009027) IKZF1 (ENSMMNG00015009060) FIGNL1 (ENSMMNG00015009090) DDC (ENSMMNG00015009141) ENSMMNG00015009222 COBL (ENSMMNG00015009269) ENSMMNG00015009341 ENSMMNG00015009346 VSTM2A (ENSMMNG00015010168) ENSMMNG00015010184 EGFR (ENSMMNG00015010237) LANCL2 (ENSMMNG00015010287) VOPP1 (ENSMMNG00015010340) PGAM2 (ENSMMNG00015010428) ##22 DBNL (ENSMMNG00015010470) URGCP (ENSMMNG00015010531) ENSMMNG00015010539 TNS3 (ENSMMNG00015010584) IGFBP3 (ENSMMNG00015010669) IGFBP1 (ENSMMNG00015010699) CCDC201 (ENSMMNG00015010720) ADCY1 (ENSMMNG00015010742) RAMP3 (ENSMMNG00015010800) ENSMMNG00015010824 TBRG4 (ENSMMNG00015010846) ENSMMNG00015010885 ENSMMNG00015010898 CCM2 (ENSMMNG00015010954) MYO1G (ENSMMNG00015011062) Beluga whale MODERN SPECIES 17 VWC2 (ENSDLEG00000007130) ZPBP (ENSDLEG00000007123) ENSDLEG00000007117 IKZF1 (ENSDLEG00000007094) FIGNL1 (ENSDLEG00000007088) DDC (ENSDLEG00000007076) ENSDLEG00000007069 COBL (ENSDLEG00000007036) ENSDLEG00000007019 ENSDLEG00000007010 VSTM2A (ENSDLEG00000007004) ENSDLEG00000006999 EGFR (ENSDLEG00000004590) LANCL2 (ENSDLEG00000004118) VOPP1 (ENSDLEG00000004105) PGAM2 (ENSDLEG00000004099) ##22 DBNL (ENSDLEG00000004073) ENSDLEG00000004063 URGCP (ENSDLEG00000004057) MRPS24 (ENSDLEG00000004051) TNS3 (ENSDLEG00000003402) IGFBP3 (ENSDLEG00000003238) IGFBP1 (ENSDLEG00000005245) ADCY1 (ENSDLEG00000005087) RAMP3 (ENSDLEG00000005050) ENSDLEG00000005039 TBRG4 (ENSDLEG00000005026) ENSDLEG00000005015 ENSDLEG00000005007 CCM2 (ENSDLEG00000004996) MYO1G (ENSDLEG00000004931) Vaquita MODERN SPECIES 20 VWC2 (ENSPSNG00000012383) ZPBP (ENSPSNG00000012291) SPATA48 (ENSPSNG00000012190) IKZF1 (ENSPSNG00000011675) FIGNL1 (ENSPSNG00000011531) DDC (ENSPSNG00000010797) ENSPSNG00000010618 COBL (ENSPSNG00000010423) ENSPSNG00000010338 ENSPSNG00000010324 VSTM2A (ENSPSNG00000010151) ENSPSNG00000010098 EGFR (ENSPSNG00000009800) LANCL2 (ENSPSNG00000012929) VOPP1 (ENSPSNG00000012635) PGAM2 (ENSPSNG00000012549) ##22 ENSPSNG00000012405 URGCP (ENSPSNG00000012351) ENSPSNG00000012295 TNS3 (ENSPSNG00000012169) ENSPSNG00000012082 IGFBP3 (ENSPSNG00000011930) IGFBP1 (ENSPSNG00000011784) ADCY1 (ENSPSNG00000011384) ENSPSNG00000011293 ENSPSNG00000011238 TBRG4 (ENSPSNG00000011120) ENSPSNG00000011060 CCM2 (ENSPSNG00000010943) MYO1G (ENSPSNG00000010478) PURB (ENSPSNG00000010443) Dolphin MODERN SPECIES 856 PGAM2 (ENSTTRG00000002992) ##22 DBNL (ENSTTRG00000002982) ENSTTRG00000002972 URGCP (ENSTTRG00000002953) MRPS24 (ENSTTRG00000002938) Sperm whale MODERN SPECIES 16 VWC2 (ENSPCTG00005002093) ZPBP (ENSPCTG00005002058) SPATA48 (ENSPCTG00005002024) IKZF1 (ENSPCTG00005001820) FIGNL1 (ENSPCTG00005001765) DDC (ENSPCTG00005001473) GRB10 (ENSPCTG00005001292) ENSPCTG00005001225 ENSPCTG00005001218 VSTM2A (ENSPCTG00005001196) SEC61G (ENSPCTG00005001175) EGFR (ENSPCTG00005001100) LANCL2 (ENSPCTG00005001055) VOPP1 (ENSPCTG00005000911) PGAM2 (ENSPCTG00005000870) ##22 DBNL (ENSPCTG00005000789) UBE2D4 (ENSPCTG00005000753) ENSPCTG00005000738 IGFBP3 (ENSPCTG00005000698) IGFBP1 (ENSPCTG00005000667) ADCY1 (ENSPCTG00005000587) ENSPCTG00005000553 RAMP3 (ENSPCTG00005000535) ENSPCTG00005000520 TBRG4 (ENSPCTG00005000487) ENSPCTG00005000414 CCM2 (ENSPCTG00005000360) ENSPCTG00005000278 ENSPCTG00005000252 PURB (ENSPCTG00005000229) Blue whale MODERN SPECIES 20 SPATA48 (ENSBMSG00010018967) IKZF1 (ENSBMSG00010018269) FIGNL1 (ENSBMSG00010018171) DDC (ENSBMSG00010016624) GRB10 (ENSBMSG00010016341) COBL (ENSBMSG00010015624) ENSBMSG00010015552 ENSBMSG00010015529 ENSBMSG00010015405 ENSBMSG00010015380 VSTM2A (ENSBMSG00010015308) ENSBMSG00010015274 EGFR (ENSBMSG00010015093) ENSBMSG00010015050 VOPP1 (ENSBMSG00010014847) PGAM2 (ENSBMSG00010014799) ##22 DBNL (ENSBMSG00010014621) ENSBMSG00010014534 URGCP (ENSBMSG00010014423) ENSBMSG00010014382 TNS3 (ENSBMSG00010014209) IGFBP3 (ENSBMSG00010014079) IGFBP1 (ENSBMSG00010013990) ADCY1 (ENSBMSG00010013864) ENSBMSG00010011864 ENSBMSG00010011856 RAMP3 (ENSBMSG00010011842) ENSBMSG00010011823 TBRG4 (ENSBMSG00010011787) ENSBMSG00010011679 CCM2 (ENSBMSG00010011613) Pecora ANCESTRAL SPECIES 49 ENSGT00390000001319.nb.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Percora_a ANCESTRAL SPECIES 44 ENSGT00390000001319.nb.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Bovidae ANCESTRAL SPECIES 19 ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 ENSGT00940000157131.b ENSGT00560000077278.b ENSGT00940000153704.A ENSGT00390000018696 ENSGT00940000158728 ENSGT00940000157045 ENSGT00940000161037 ENSGT00390000001319.nb.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Caprinae ANCESTRAL SPECIES 15 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 ENSGT00940000157131.b ENSGT00560000077278.b ENSGT00940000153704.A ENSGT00390000018696 ENSGT00940000158728 ENSGT00940000157045 ENSGT00940000161037 ENSGT00390000001319.nb.b ENSGT00390000001319.nb.a ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Goat MODERN SPECIES 14 STT3B (ENSCHIG00000013391) ENSCHIG00000020290 GADL1 (ENSCHIG00000015633) TGFBR2 (ENSCHIG00000011473) RBMS3 (ENSCHIG00000009144) ENSCHIG00000022736 AZI2 (ENSCHIG00000017018) CMC1 (ENSCHIG00000009271) EOMES (ENSCHIG00000024745) SLC4A7 (ENSCHIG00000015677) NEK10 (ENSCHIG00000003691) SEC61G (ENSCHIG00000015002) EGFR (ENSCHIG00000020547) LANCL2 (ENSCHIG00000016442) VOPP1 (ENSCHIG00000012490) PGAM2 (ENSCHIG00000005138) ##22 DBNL (ENSCHIG00000015882) ENSCHIG00000024005 URGCP (ENSCHIG00000015397) MRPS24 (ENSCHIG00000022276) ENSCHIG00000024528 Rambouillet Sheep MODERN SPECIES 10 OSBPL10 (ENSOARG00020024245) ENSOARG00020024192 GADL1 (ENSOARG00020024116) TGFBR2 (ENSOARG00020024064) RBMS3 (ENSOARG00020023909) AZI2 (ENSOARG00020023862) CMC1 (ENSOARG00020023823) EOMES (ENSOARG00020023776) SLC4A7 (ENSOARG00020018025) NEK10 (ENSOARG00020017393) ENSOARG00020017329 ENSOARG00020017266 EGFR (ENSOARG00020016388) LANCL2 (ENSOARG00020016230) VOPP1 (ENSOARG00020015646) PGAM2 (ENSOARG00020015624) ##22 DBNL (ENSOARG00020015082) ENSOARG00020014847 URGCP (ENSOARG00020014532) Bovinae ANCESTRAL SPECIES 16 ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 ENSGT00940000157131.b ENSGT00560000077278.b ENSGT00940000153704.A ENSGT00390000018696 ENSGT00940000158728 ENSGT00940000157045 ENSGT00940000161037 ENSGT00390000001319.nb.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Bos ANCESTRAL SPECIES 16 ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 ENSGT00940000157131.b ENSGT00560000077278.b ENSGT00940000153704.A ENSGT00390000018696 ENSGT00940000158728 ENSGT00940000157045 ENSGT00940000161037 ENSGT00390000001319.nb.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.p Bos_b ANCESTRAL SPECIES 17 ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 ENSGT00940000157131.b ENSGT00560000077278.b ENSGT00940000153704.A ENSGT00390000018696 ENSGT00940000158728 ENSGT00940000157045 ENSGT00940000161037 ENSGT00390000001319.nb.b ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.o.b Cow MODERN SPECIES 14 OSBPL10 (ENSBTAG00000009194) STT3B (ENSBTAG00000007438) GADL1 (ENSBTAG00000007131) TGFBR2 (ENSBTAG00000019832) RBMS3 (ENSBTAG00000044062) ZCWPW2 (ENSBTAG00000022751) AZI2 (ENSBTAG00000004117) CMC1 (ENSBTAG00000035286) EOMES (ENSBTAG00000016920) SLC4A7 (ENSBTAG00000018227) NEK10 (ENSBTAG00000000220) SEC61G (ENSBTAG00000014971) EGFR (ENSBTAG00000011628) LANCL2 (ENSBTAG00000018026) VOPP1 (ENSBTAG00000012073) PGAM2 (ENSBTAG00000014547) ##22 DBNL (ENSBTAG00000017547) UBE2D4 (ENSBTAG00000003997) URGCP (ENSBTAG00000009453) MRPS24 (ENSBTAG00000007398) ENSBTAG00000049586 ENSBTAG00000053760 Bos_a ANCESTRAL SPECIES 140 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 Wild yak MODERN SPECIES 1647 LANCL2 (ENSBMUG00000022864) VOPP1 (ENSBMUG00000022904) PGAM2 (ENSBMUG00000022910) ##22 DBNL (ENSBMUG00000022946) UBE2D4 (ENSBMUG00000022968) American bison MODERN SPECIES 2945 LANCL2 (ENSBBBG00000005372) VOPP1 (ENSBBBG00000019829) PGAM2 (ENSBBBG00000007957) ##22 DBNL (ENSBBBG00000005346) UBE2D4 (ENSBBBG00000019616) Siberian musk deer MODERN SPECIES 1216 ENSMMSG00000022752 SEC61G (ENSMMSG00000022763) ENSMMSG00000022770 ENSMMSG00000022775 ENSMMSG00000022790 EGFR (ENSMMSG00000022810) LANCL2 (ENSMMSG00000022852) VOPP1 (ENSMMSG00000022874) PGAM2 (ENSMMSG00000022938) ##22 DBNL (ENSMMSG00000022945) UBE2D4 (ENSMMSG00000022954) URGCP (ENSMMSG00000022974) MRPS24 (ENSMMSG00000022985) Yarkand deer MODERN SPECIES 16 ENSCHYG00000014100 ENSCHYG00000014010 OR4A16 (ENSCHYG00000013995) ENSCHYG00000013944 ENSCHYG00000013894 ENSCHYG00000013817 ENSCHYG00000027141 ENSCHYG00000027138 ENSCHYG00000027136 ENSCHYG00000027135 OR5M9 (ENSCHYG00000027134) ENSCHYG00000027132 EGFR (ENSCHYG00000027128) ENSCHYG00000027122 VOPP1 (ENSCHYG00000027120) PGAM2 (ENSCHYG00000027118) ##22 ENSCHYG00000027116 UBE2D4 (ENSCHYG00000027114) URGCP (ENSCHYG00000027111) NEK10 (ENSCHYG00000027107) SLC4A7 (ENSCHYG00000027098) EOMES (ENSCHYG00000027096) ENSCHYG00000027093 AZI2 (ENSCHYG00000027091) ZCWPW2 (ENSCHYG00000027089) RBMS3 (ENSCHYG00000027074) TGFBR2 (ENSCHYG00000027066) GADL1 (ENSCHYG00000027050) STT3B (ENSCHYG00000027034) OSBPL10 (ENSCHYG00000027022) ENSCHYG00000027011 Camelidae ANCESTRAL SPECIES 98 ENSGT00940000157781 ENSGT00940000161703 ENSGT00720000108792.A ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Arabian camel MODERN SPECIES 29 VWC2 (ENSCDRG00005014668) ZPBP (ENSCDRG00005014690) SPATA48 (ENSCDRG00005014809) ENSCDRG00005014861 FIGNL1 (ENSCDRG00005014893) DDC (ENSCDRG00005014922) GRB10 (ENSCDRG00005015047) ENSCDRG00005015409 ENSCDRG00005015439 VSTM2A (ENSCDRG00005015527) SEC61G (ENSCDRG00005015629) EGFR (ENSCDRG00005015677) ENSCDRG00005015894 LANCL2 (ENSCDRG00005015911) VOPP1 (ENSCDRG00005015947) PGAM2 (ENSCDRG00005016246) ##22 DBNL (ENSCDRG00005016326) URGCP (ENSCDRG00005016741) MRPS24 (ENSCDRG00005016830) ENSCDRG00005016856 Suina ANCESTRAL SPECIES 19 ENSGT00390000003271 ENSGT00390000015236 ENSGT00390000009405.b.q.a ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 ENSGT00770000120611.B ENSGT00940000157781 ENSGT00390000014376 ENSGT00940000161393 ENSGT00390000000706 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00490000044045 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Chacoan peccary MODERN SPECIES 77 C7orf31 (ENSCWAG00000000512) ENSCWAG00000000536 OSBPL3 (ENSCWAG00000000578) ENSCWAG00000000638 GSDME (ENSCWAG00000000655) PALS2 (ENSCWAG00000000694) NPY (ENSCWAG00000000744) STK31 (ENSCWAG00000000802) FAM221A (ENSCWAG00000001136) UPP1 (ENSCWAG00000001201) C7orf57 (ENSCWAG00000001234) SUN3 (ENSCWAG00000001274) HUS1 (ENSCWAG00000001301) LANCL2 (ENSCWAG00000001326) VOPP1 (ENSCWAG00000001344) PGAM2 (ENSCWAG00000001358) ##22 DBNL (ENSCWAG00000001408) UBE2D4 (ENSCWAG00000001519) URGCP (ENSCWAG00000001532) MRPS24 (ENSCWAG00000001544) TNS3 (ENSCWAG00000001571) ENSCWAG00000001620 IGFBP3 (ENSCWAG00000001631) IGFBP1 (ENSCWAG00000001668) ADCY1 (ENSCWAG00000001712) RAMP3 (ENSCWAG00000001748) ENSCWAG00000001760 TBRG4 (ENSCWAG00000001776) ENSCWAG00000001862 CCM2 (ENSCWAG00000001911) MYO1G (ENSCWAG00000002051) Pig MODERN SPECIES 9 CYCS (ENSSSCG00000016714) OSBPL3 (ENSSSCG00000016715) GSDME (ENSSSCG00000016716) PALS2 (ENSSSCG00000016717) NPY (ENSSSCG00000016718) ENSSSCG00000037148 ENSSSCG00000016719 ENSSSCG00000056164 FAM221A (ENSSSCG00000038792) UPP1 (ENSSSCG00000030388) C7orf57 (ENSSSCG00000033266) SUN3 (ENSSSCG00000022557) HUS1 (ENSSSCG00000028523) LANCL2 (ENSSSCG00000023801) VOPP1 (ENSSSCG00000032734) PGAM2 (ENSSSCG00000016720) ##22 DBNL (ENSSSCG00000016721) UBE2D4 (ENSSSCG00000016722) URGCP (ENSSSCG00000040519) MRPS24 (ENSSSCG00000016724) TNS3 (ENSSSCG00000016725) IGFBP3 (ENSSSCG00000058216) IGFBP1 (ENSSSCG00000016728) ENSSSCG00000050056 ADCY1 (ENSSSCG00000016726) ENSSSCG00000062187 RAMP3 (ENSSSCG00000031144) ENSSSCG00000016731 TBRG4 (ENSSSCG00000016732) ENSSSCG00000016733 CCM2 (ENSSSCG00000016734) Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Equus ANCESTRAL SPECIES 57 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996.u ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Donkey MODERN SPECIES H2AZ2 (ENSEASG00005025915) ENSEASG00005017822 ZMIZ2 (ENSEASG00005017817) OGDH (ENSEASG00005017801) ENSEASG00005035492 DDX56 (ENSEASG00005017795) NPC1L1 (ENSEASG00005017780) NUDCD3 (ENSEASG00005017767) CAMK2B (ENSEASG00005017762) YKT6 (ENSEASG00005017757) GCK (ENSEASG00005017749) MYL7 (ENSEASG00005017744) POLD2 (ENSEASG00005017741) AEBP1 (ENSEASG00005017728) POLM (ENSEASG00005017723) PGAM2 (ENSEASG00005017720) ##22 DBNL (ENSEASG00005017717) UBE2D4 (ENSEASG00005017715) URGCP (ENSEASG00005017713) MRPS24 (ENSEASG00005030446) BLVRA (ENSEASG00005017707) COA1 (ENSEASG00005029281) STK17A (ENSEASG00005017699) HECW1 (ENSEASG00005017685) ENSEASG00005027314 PSMA2 (ENSEASG00005017678) C7orf25 (ENSEASG00005017675) GLI3 (ENSEASG00005017667) INHBA (ENSEASG00005029952) SUGCT (ENSEASG00005017649) MPLKIP (ENSEASG00005017642) Horse MODERN SPECIES 25 ZMIZ2 (ENSECAG00000024843) OGDH (ENSECAG00000023953) TMED4 (ENSECAG00000016918) DDX56 (ENSECAG00000019897) ENSECAG00000032300 NPC1L1 (ENSECAG00000023982) ENSECAG00000055483 NUDCD3 (ENSECAG00000022535) CAMK2B (ENSECAG00000017000) YKT6 (ENSECAG00000010316) GCK (ENSECAG00000022171) MYL7 (ENSECAG00000018912) POLD2 (ENSECAG00000018009) AEBP1 (ENSECAG00000019884) POLM (ENSECAG00000013117) PGAM2 (ENSECAG00000046525) ##22 DBNL (ENSECAG00000012048) UBE2D4 (ENSECAG00000019978) URGCP (ENSECAG00000017344) MRPS24 (ENSECAG00000014621) ENSECAG00000009786 BLVRA (ENSECAG00000011650) COA1 (ENSECAG00000011136) STK17A (ENSECAG00000006915) HECW1 (ENSECAG00000010537) PSMA2 (ENSECAG00000020597) ENSECAG00000009052 C4H7orf25 (ENSECAG00000002284) GLI3 (ENSECAG00000009281) INHBA (ENSECAG00000022448) SUGCT (ENSECAG00000020946) Chiroptera ANCESTRAL SPECIES 67 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Megabat MODERN SPECIES 6580 CAMK2B (ENSPVAG00000008082) YKT6 (ENSPVAG00000008081) GCK (ENSPVAG00000008079) MYL7 (ENSPVAG00000008077) POLD2 (ENSPVAG00000008075) AEBP1 (ENSPVAG00000008074) POLM (ENSPVAG00000008070) PGAM2 (ENSPVAG00000008069) ##22 DBNL (ENSPVAG00000008067) Microchiroptera ANCESTRAL SPECIES 59 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Microbat MODERN SPECIES 1823 ENSMLUG00000005479 GCK (ENSMLUG00000012016) MYL7 (ENSMLUG00000012005) POLD2 (ENSMLUG00000011994) AEBP1 (ENSMLUG00000011971) POLM (ENSMLUG00000011953) PGAM2 (ENSMLUG00000011943) ##22 DBNL (ENSMLUG00000011929) UBE2D4 (ENSMLUG00000011919) URGCP (ENSMLUG00000005131) MRPS24 (ENSMLUG00000005121) Greater horseshoe bat MODERN SPECIES 12 H2AZ2 (ENSRFEG00010021273) ENSRFEG00010021241 ZMIZ2 (ENSRFEG00010021151) OGDH (ENSRFEG00010021036) ENSRFEG00010020979 DDX56 (ENSRFEG00010020937) NPC1L1 (ENSRFEG00010020867) NUDCD3 (ENSRFEG00010020831) CAMK2B (ENSRFEG00010020714) YKT6 (ENSRFEG00010020632) GCK (ENSRFEG00010020533) MYL7 (ENSRFEG00010020461) POLD2 (ENSRFEG00010020433) AEBP1 (ENSRFEG00010020403) POLM (ENSRFEG00010020319) PGAM2 (ENSRFEG00010020304) ##22 DBNL (ENSRFEG00010020128) URGCP (ENSRFEG00010020016) MRPS24 (ENSRFEG00010019993) Carnivora ANCESTRAL SPECIES 15 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Felidae ANCESTRAL SPECIES 13 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Panthera ANCESTRAL SPECIES 1 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 ENSGT00390000000903.b ENSGT01050000244850.A.b ENSGT00390000016807 ENSGT01050000244824.F Panthera_a ANCESTRAL SPECIES ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000160913 ENSGT00940000156977 ENSGT00940000153110.A ENSGT00940000162216 ENSGT00390000015136 ENSGT00940000161154 ENSGT00390000004778 ENSGT00940000159178 ENSGT00390000000903.b ENSGT01050000244850.A.b ENSGT00390000016807 ENSGT01050000244824.F leopard MODERN SPECIES 20 H2AZ2 (ENSPPRG00000000061) ENSPPRG00000001180 ZMIZ2 (ENSPPRG00000006857) OGDH (ENSPPRG00000011132) TMED4 (ENSPPRG00000013278) DDX56 (ENSPPRG00000014594) NPC1L1 (ENSPPRG00000024119) NUDCD3 (ENSPPRG00000023951) CAMK2B (ENSPPRG00000023528) YKT6 (ENSPPRG00000022701) GCK (ENSPPRG00000001844) MYL7 (ENSPPRG00000002309) POLD2 (ENSPPRG00000006721) AEBP1 (ENSPPRG00000007601) POLM (ENSPPRG00000009385) PGAM2 (ENSPPRG00000009633) ##22 DBNL (ENSPPRG00000016242) URGCP (ENSPPRG00000019392) MRPS24 (ENSPPRG00000019882) lion MODERN SPECIES 2 H2AZ2 (ENSPLOG00000007660) ENSPLOG00000007614 ZMIZ2 (ENSPLOG00000007381) OGDH (ENSPLOG00000007164) TMED4 (ENSPLOG00000007034) DDX56 (ENSPLOG00000006977) NPC1L1 (ENSPLOG00000006816) NUDCD3 (ENSPLOG00000006720) CAMK2B (ENSPLOG00000005761) YKT6 (ENSPLOG00000005393) GCK (ENSPLOG00000005357) MYL7 (ENSPLOG00000005336) POLD2 (ENSPLOG00000005310) AEBP1 (ENSPLOG00000005280) POLM (ENSPLOG00000005263) PGAM2 (ENSPLOG00000005255) ##22 DBNL (ENSPLOG00000005208) URGCP (ENSPLOG00000005169) MRPS24 (ENSPLOG00000005156) ALDH1L1 (ENSPLOG00000004392) KLF15 (ENSPLOG00000004355) CFAP100 (ENSPLOG00000004337) ZXDC (ENSPLOG00000004315) UROC1 (ENSPLOG00000004294) CHST13 (ENSPLOG00000004278) C3orf22 (ENSPLOG00000004263) TXNRD3 (ENSPLOG00000004215) CHCHD6 (ENSPLOG00000004177) PLXNA1 (ENSPLOG00000004165) TPRA1 (ENSPLOG00000004134) MCM2 (ENSPLOG00000004115) Tiger MODERN SPECIES 24 CCM2 (ENSPTIG00000016795) MYO1G (ENSPTIG00000020405) H2AZ2 (ENSPTIG00000020941) ENSPTIG00000021058 OGDH (ENSPTIG00000011836) TMED4 (ENSPTIG00000019158) DDX56 (ENSPTIG00000019500) ENSPTIG00000020252 NUDCD3 (ENSPTIG00000020534) CAMK2B (ENSPTIG00000003495) YKT6 (ENSPTIG00000012852) GCK (ENSPTIG00000013711) MYL7 (ENSPTIG00000016950) POLD2 (ENSPTIG00000018542) POLM (ENSPTIG00000020448) PGAM2 (ENSPTIG00000020599) ##22 DBNL (ENSPTIG00000021038) URGCP (ENSPTIG00000003252) MRPS24 (ENSPTIG00000005496) Cat MODERN SPECIES 1 PURB (ENSFCAG00000039247) H2AZ2 (ENSFCAG00000010271) PPIA (ENSFCAG00000009159) ZMIZ2 (ENSFCAG00000010268) OGDH (ENSFCAG00000010264) TMED4 (ENSFCAG00000010263) NPC1L1 (ENSFCAG00000010256) NUDCD3 (ENSFCAG00000010253) CAMK2B (ENSFCAG00000019129) YKT6 (ENSFCAG00000014362) GCK (ENSFCAG00000014361) MYL7 (ENSFCAG00000014360) POLD2 (ENSFCAG00000014359) AEBP1 (ENSFCAG00000014358) POLM (ENSFCAG00000029004) PGAM2 (ENSFCAG00000023275) ##22 DBNL (ENSFCAG00000014355) URGCP (ENSFCAG00000031416) MRPS24 (ENSFCAG00000027947) ENSFCAG00000001776 KLF15 (ENSFCAG00000015732) CFAP100 (ENSFCAG00000015734) ZXDC (ENSFCAG00000015744) UROC1 (ENSFCAG00000015746) CHST13 (ENSFCAG00000032669) ENSFCAG00000049526 TXNRD3 (ENSFCAG00000000974) PLXNA1 (ENSFCAG00000000976) MCM2 (ENSFCAG00000013550) TPRA1 (ENSFCAG00000028259) ABTB1 (ENSFCAG00000013553) Caniformia ANCESTRAL SPECIES 11 ENSGT00900000140979.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00900000140979.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179.y Ursidae ANCESTRAL SPECIES 12 ENSGT00900000140979.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012.x ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179.y.b ENSGT00390000011179.y.a ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.eb ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Ursus ANCESTRAL SPECIES 47 ENSGT00900000140979.b ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012.x ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179.y.b ENSGT00390000011179.y.a ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.eb ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 American black bear MODERN SPECIES 322 CAMK2B (ENSUAMG00000005274) YKT6 (ENSUAMG00000004717) GCK (ENSUAMG00000004714) MYL7 (ENSUAMG00000004709) POLD2 (ENSUAMG00000004707) AEBP1 (ENSUAMG00000004703) ENSUAMG00000004700 ENSUAMG00000004699 PGAM2 (ENSUAMG00000004693) ##22 DBNL (ENSUAMG00000004505) URGCP (ENSUAMG00000004490) ENSUAMG00000004487 Polar bear MODERN SPECIES 254 TBRG4 (ENSUMAG00000009532) ENSUMAG00000009538 MYO1G (ENSUMAG00000009562) H2AZ2 (ENSUMAG00000009609) ENSUMAG00000009616 OGDH (ENSUMAG00000009648) TMED4 (ENSUMAG00000009661) DDX56 (ENSUMAG00000009666) NPC1L1 (ENSUMAG00000009683) ENSUMAG00000009696 ENSUMAG00000009707 ENSUMAG00000009711 YKT6 (ENSUMAG00000009731) MYL7 (ENSUMAG00000009737) ENSUMAG00000009769 PGAM2 (ENSUMAG00000009777) ##22 ENSUMAG00000009798 ENSUMAG00000009803 ENSUMAG00000009809 BLVRA (ENSUMAG00000009818) COA1 (ENSUMAG00000009824) STK17A (ENSUMAG00000009828) ENSUMAG00000009834 ENSUMAG00000009845 MRPL32 (ENSUMAG00000009855) PSMA2 (ENSUMAG00000009859) C7orf25 (ENSUMAG00000009863) ENSUMAG00000009879 INHBA (ENSUMAG00000009886) SUGCT (ENSUMAG00000009910) MPLKIP (ENSUMAG00000009927) Giant Panda MODERN SPECIES PURB (ENSAMEG00000030637) ENSAMEG00000017799 ENSAMEG00000017784 ZMIZ2 (ENSAMEG00000017768) OGDH (ENSAMEG00000017730) TMED4 (ENSAMEG00000017721) DDX56 (ENSAMEG00000017711) NPC1L1 (ENSAMEG00000017673) NUDCD3 (ENSAMEG00000017668) CAMK2B (ENSAMEG00000017625) YKT6 (ENSAMEG00000017618) GCK (ENSAMEG00000017601) MYL7 (ENSAMEG00000017578) POLD2 (ENSAMEG00000017560) POLM (ENSAMEG00000017526) ENSAMEG00000017522 ##22 ENSAMEG00000017502 ENSAMEG00000028932 ENSAMEG00000024440 EIF2A (ENSAMEG00000010505) SELENOT (ENSAMEG00000008718) ERICH6 (ENSAMEG00000008727) SIAH2 (ENSAMEG00000008730) MINDY4B (ENSAMEG00000008742) CLRN1 (ENSAMEG00000008747) GPR171 (ENSAMEG00000019039) P2RY14 (ENSAMEG00000019052) GPR87 (ENSAMEG00000008852) P2RY13 (ENSAMEG00000019079) P2RY12 (ENSAMEG00000019091) ENSAMEG00000008749 Mustelinae ANCESTRAL SPECIES 85 ENSGT00900000140979.a.b ENSGT00950000183087.A.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179.y ENSGT00910000144359 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a Ferret MODERN SPECIES 165 OGDH (ENSMPUG00000018194) TMED4 (ENSMPUG00000018195) DDX56 (ENSMPUG00000018196) NPC1L1 (ENSMPUG00000018197) NUDCD3 (ENSMPUG00000018198) CAMK2B (ENSMPUG00000018199) ENSMPUG00000018391 ENSMPUG00000018200 GCK (ENSMPUG00000018201) MYL7 (ENSMPUG00000018202) ENSMPUG00000018203 AEBP1 (ENSMPUG00000018204) ENSMPUG00000018205 POLM (ENSMPUG00000018206) ENSMPUG00000018392 PGAM2 (ENSMPUG00000018207) ##22 DBNL (ENSMPUG00000018208) URGCP (ENSMPUG00000018209) ENSMPUG00000018210 OR2I1P (ENSMPUG00000018393) ENSMPUG00000018211 ENSMPUG00000018212 ENSMPUG00000018213 ENSMPUG00000018214 ENSMPUG00000018215 ENSMPUG00000018216 ENSMPUG00000018217 ENSMPUG00000018218 ENSMPUG00000018219 ENSMPUG00000018220 ENSMPUG00000018221 American mink MODERN SPECIES 245 ENSNVIG00000021873 ZMIZ2 (ENSNVIG00000021773) OGDH (ENSNVIG00000021703) TMED4 (ENSNVIG00000021686) DDX56 (ENSNVIG00000021632) ENSNVIG00000021611 ENSNVIG00000021585 NUDCD3 (ENSNVIG00000021579) CAMK2B (ENSNVIG00000021221) YKT6 (ENSNVIG00000021168) GCK (ENSNVIG00000021119) MYL7 (ENSNVIG00000021107) POLD2 (ENSNVIG00000021087) AEBP1 (ENSNVIG00000021021) POLM (ENSNVIG00000021016) PGAM2 (ENSNVIG00000021011) ##22 DBNL (ENSNVIG00000020945) URGCP (ENSNVIG00000020932) ENSNVIG00000020926 UBD (ENSNVIG00000020921) OR2I1P (ENSNVIG00000020908) Canidae ANCESTRAL SPECIES 69 ENSGT00900000140979.a.a.ab ENSGT00950000183087.A.a.a.b.p.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Red fox MODERN SPECIES 274 ENSVVUG00000011986 ENSVVUG00000011981 ZMIZ2 (ENSVVUG00000011961) OGDH (ENSVVUG00000011930) TMED4 (ENSVVUG00000011912) DDX56 (ENSVVUG00000011905) NPC1L1 (ENSVVUG00000011887) NUDCD3 (ENSVVUG00000011881) CAMK2B (ENSVVUG00000008671) YKT6 (ENSVVUG00000008511) GCK (ENSVVUG00000008505) MYL7 (ENSVVUG00000008494) POLD2 (ENSVVUG00000008484) AEBP1 (ENSVVUG00000008470) POLM (ENSVVUG00000008318) PGAM2 (ENSVVUG00000008295) ##22 DBNL (ENSVVUG00000008287) URGCP (ENSVVUG00000008277) ENSVVUG00000008273 ENSVVUG00000008267 Canis_lupus ANCESTRAL SPECIES 52 ENSGT00900000140979.a.a.ab ENSGT00950000183087.A.a.a.a.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000010128.p.a.b.b Dingo MODERN SPECIES 319 ENSCAFG00020019735 ENSCAFG00020019732 ZMIZ2 (ENSCAFG00020019721) OGDH (ENSCAFG00020019711) TMED4 (ENSCAFG00020019707) DDX56 (ENSCAFG00020019695) NPC1L1 (ENSCAFG00020019646) NUDCD3 (ENSCAFG00020019639) CAMK2B (ENSCAFG00020016629) YKT6 (ENSCAFG00020016566) GCK (ENSCAFG00020016524) MYL7 (ENSCAFG00020016519) POLD2 (ENSCAFG00020016514) AEBP1 (ENSCAFG00020016512) POLM (ENSCAFG00020016508) PGAM2 (ENSCAFG00020016505) ##22 DBNL (ENSCAFG00020016499) URGCP (ENSCAFG00020016495) MRPS24 (ENSCAFG00020016492) ENSCAFG00020016487 Dog MODERN SPECIES 7 H2AFV (ENSCAFG00845011363) RPL37 (ENSCAFG00845011502) PPIA (ENSCAFG00845011538) ZMIZ2 (ENSCAFG00845011634) OGDH (ENSCAFG00845012087) TMED4 (ENSCAFG00845012302) NPC1L1 (ENSCAFG00845012489) NUDCD3 (ENSCAFG00845012602) CAMK2B (ENSCAFG00845012770) YKT6 (ENSCAFG00845013042) GCK (ENSCAFG00845013118) MYL7 (ENSCAFG00845005721) POLD2 (ENSCAFG00845005836) AEBP1 (ENSCAFG00845005991) POLM (ENSCAFG00845006272) PGAM2 (ENSCAFG00845006374) ##22 DBNL (ENSCAFG00845006509) URGCP (ENSCAFG00845006768) ENSCAFG00845006854 ENSCAFG00845006945 ENSCAFG00845007156 ENSCAFG00845007400 ENSCAFG00845007653 ENSCAFG00845007944 ZNF425 (ENSCAFG00845007981) ZNF398 (ENSCAFG00845008073) ZNF282 (ENSCAFG00845008180) ZNF783 (ENSCAFG00845008245) ZNF777 (ENSCAFG00845008339) ZNF746 (ENSCAFG00845008380) KRBA1 (ENSCAFG00845008456) Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 ENSGT00940000157116 Euarchontoglires_A ANCESTRAL SPECIES 23 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Tree shrew MODERN SPECIES 4923 MYL7 (ENSTBEG00000006959) AEBP1 (ENSTBEG00000005763) ENSTBEG00000005043 PGAM2 (ENSTBEG00000004587) ##22 DBNL (ENSTBEG00000004139) UBE2D4 (ENSTBEG00000003691) Glires ANCESTRAL SPECIES 24 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Lagomorpha ANCESTRAL SPECIES 146 ENSGT00390000016168.a ENSGT00940000158053 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Rabbit MODERN SPECIES 1 ENSOCUG00000008133 ENSOCUG00000016662 ZMIZ2 (ENSOCUG00000022046) OGDH (ENSOCUG00000002419) TMED4 (ENSOCUG00000003964) DDX56 (ENSOCUG00000022918) NPC1L1 (ENSOCUG00000023032) ENSOCUG00000023828 ENSOCUG00000021803 ENSOCUG00000002981 ENSOCUG00000001018 ENSOCUG00000036640 AEBP1 (ENSOCUG00000014914) POLD2 (ENSOCUG00000014942) POLM (ENSOCUG00000022428) PGAM2 (ENSOCUG00000027853) ##22 ENSOCUG00000027855 ENSOCUG00000031138 ENSOCUG00000010530 ENSOCUG00000021755 ENSOCUG00000033651 SEMA3A (ENSOCUG00000011919) SEMA3D (ENSOCUG00000012016) GRM3 (ENSOCUG00000007359) ELAPOR2 (ENSOCUG00000007364) DMTF1 (ENSOCUG00000009179) TMEM243 (ENSOCUG00000009187) CROT (ENSOCUG00000010544) ABCB1 (ENSOCUG00000014981) ENSOCUG00000036400 SLC25A40 (ENSOCUG00000015008) Rodentia ANCESTRAL SPECIES 12 ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Rodentia_A ANCESTRAL SPECIES 12 ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Sciuridae ANCESTRAL SPECIES 7 ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012.s ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 Marmotini ANCESTRAL SPECIES 37 ENSGT00950000183087.B ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012.s ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153505.a.a.c.a ENSGT00390000011072 ENSGT00960000189879 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012.s ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153505.a.a.c.a ENSGT00390000011072 ENSGT00960000189879 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 Arctic ground squirrel MODERN SPECIES 214 ENSUPAG00010022046 ENSUPAG00010022045 ZMIZ2 (ENSUPAG00010022033) OGDH (ENSUPAG00010021984) TMED4 (ENSUPAG00010021975) DDX56 (ENSUPAG00010021974) NPC1L1 (ENSUPAG00010021963) NUDCD3 (ENSUPAG00010021958) CAMK2B (ENSUPAG00010021102) YKT6 (ENSUPAG00010021076) GCK (ENSUPAG00010021047) MYL7 (ENSUPAG00010021036) POLD2 (ENSUPAG00010021026) AEBP1 (ENSUPAG00010020977) POLM (ENSUPAG00010020954) PGAM2 (ENSUPAG00010020948) ##22 DBNL (ENSUPAG00010020898) Squirrel MODERN SPECIES 78 ENSSTOG00000010215 ZMIZ2 (ENSSTOG00000010197) OGDH (ENSSTOG00000000469) TMED4 (ENSSTOG00000014658) DDX56 (ENSSTOG00000000464) NPC1L1 (ENSSTOG00000020879) ENSSTOG00000031145 NUDCD3 (ENSSTOG00000000456) CAMK2B (ENSSTOG00000000450) YKT6 (ENSSTOG00000000448) GCK (ENSSTOG00000002740) MYL7 (ENSSTOG00000002725) POLD2 (ENSSTOG00000002713) AEBP1 (ENSSTOG00000002677) POLM (ENSSTOG00000002662) PGAM2 (ENSSTOG00000008573) ##22 DBNL (ENSSTOG00000002644) UBE2D4 (ENSSTOG00000002630) URGCP (ENSSTOG00000010637) MRPS24 (ENSSTOG00000032907) BLVRA (ENSSTOG00000021499) STK17A (ENSSTOG00000026139) HECW1 (ENSSTOG00000016043) MRPL32 (ENSSTOG00000013340) PSMA2 (ENSSTOG00000013334) C7orf25 (ENSSTOG00000027844) GLI3 (ENSSTOG00000020844) ENSSTOG00000034121 SUGCT (ENSSTOG00000011998) MPLKIP (ENSSTOG00000026468) CDK13 (ENSSTOG00000022568) Alpin marmot MODERN SPECIES 26 ENSMMMG00000014677 ENSMMMG00000014669 ZMIZ2 (ENSMMMG00000014533) OGDH (ENSMMMG00000014266) ENSMMMG00000014248 DDX56 (ENSMMMG00000014226) NPC1L1 (ENSMMMG00000014118) NUDCD3 (ENSMMMG00000014107) CAMK2B (ENSMMMG00000012507) YKT6 (ENSMMMG00000012487) GCK (ENSMMMG00000012459) MYL7 (ENSMMMG00000012448) POLD2 (ENSMMMG00000012436) ENSMMMG00000012394 POLM (ENSMMMG00000012375) PGAM2 (ENSMMMG00000012371) ##22 DBNL (ENSMMMG00000012313) ENSMMMG00000012291 URGCP (ENSMMMG00000012282) MRPS24 (ENSMMMG00000012279) ENSMMMG00000012270 BLVRA (ENSMMMG00000012252) ENSMMMG00000012217 STK17A (ENSMMMG00000012208) ENSMMMG00000012200 HECW1 (ENSMMMG00000012160) ENSMMMG00000012152 MRPL32 (ENSMMMG00000012145) PSMA2 (ENSMMMG00000012134) C7orf25 (ENSMMMG00000012127) ENSMMMG00000012115 Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005009853 ZMIZ2 (ENSSVLG00005009754) ENSSVLG00005009696 OGDH (ENSSVLG00005009410) ENSSVLG00005009279 DDX56 (ENSSVLG00005009218) NPC1L1 (ENSSVLG00005008888) NUDCD3 (ENSSVLG00005008781) CAMK2B (ENSSVLG00005007607) ENSSVLG00005007143 GCK (ENSSVLG00005006971) MYL7 (ENSSVLG00005006900) POLD2 (ENSSVLG00005006846) AEBP1 (ENSSVLG00005006770) POLM (ENSSVLG00005006728) PGAM2 (ENSSVLG00005006699) ##22 DBNL (ENSSVLG00005006493) UBE2D4 (ENSSVLG00005006358) ENSSVLG00005006336 URGCP (ENSSVLG00005006226) MRPS24 (ENSSVLG00005006180) ENSSVLG00005006086 BLVRA (ENSSVLG00005006049) COA1 (ENSSVLG00005006028) STK17A (ENSSVLG00005005990) HECW1 (ENSSVLG00005005468) ENSSVLG00005005320 MRPL32 (ENSSVLG00005005303) PSMA2 (ENSSVLG00005005237) C7orf25 (ENSSVLG00005005209) GLI3 (ENSSVLG00005005178) Hystricomorpha ANCESTRAL SPECIES 17 ENSGT00900000140979.a.b.vb ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000161752 ENSGT00950000182890.A.a.b.b.b ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00530000064242.b Naked mole-rat female MODERN SPECIES H2AFV (ENSHGLG00000037585) ENSHGLG00000036983 PPIA (ENSHGLG00000040573) ZMIZ2 (ENSHGLG00000005097) OGDH (ENSHGLG00000008706) TMED4 (ENSHGLG00000019465) DDX56 (ENSHGLG00000017271) NPC1L1 (ENSHGLG00000018856) NUDCD3 (ENSHGLG00000015378) CAMK2B (ENSHGLG00000015797) YKT6 (ENSHGLG00000019116) GCK (ENSHGLG00000019150) MYL7 (ENSHGLG00000018902) POLD2 (ENSHGLG00000014784) POLM (ENSHGLG00000014178) PGAM2 (ENSHGLG00000012441) ##22 DBNL (ENSHGLG00000013008) ENSHGLG00000043334 ENSHGLG00000005469 ENSHGLG00000041438 ENSHGLG00000038583 ENSHGLG00000036018 ENSHGLG00000041022 ENSHGLG00000033643 ENSHGLG00000048189 ENSHGLG00000016304 ENSHGLG00000009551 NIPSNAP2 (ENSHGLG00000005574) PSPH (ENSHGLG00000010095) ENSHGLG00000009645 PHKG1 (ENSHGLG00000018933) Hystricomorpha_a ANCESTRAL SPECIES 16 ENSGT00900000140979.a.b.vb ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000161752 ENSGT00950000182890.A.a.b.b.b ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631 ENSGT00940000162897 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00530000064242.b Hystricomorpha_b ANCESTRAL SPECIES 38 ENSGT00900000140979.a.b.vb ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000161752 ENSGT00950000182890.A.a.b.b.b ENSGT00530000064130 ENSGT00950000183018.a.d ENSGT00390000003115 ENSGT00940000154631 ENSGT00390000008983.b ENSGT00940000158139 ENSGT00440000038159 ENSGT00530000064242.b ENSGT00940000157044.f Long-tailed chinchilla MODERN SPECIES 163 ENSCLAG00000007031 ENSCLAG00000006301 ZMIZ2 (ENSCLAG00000006368) OGDH (ENSCLAG00000016487) TMED4 (ENSCLAG00000011255) DDX56 (ENSCLAG00000007666) NPC1L1 (ENSCLAG00000008529) NUDCD3 (ENSCLAG00000010110) CAMK2B (ENSCLAG00000006106) YKT6 (ENSCLAG00000014974) GCK (ENSCLAG00000004771) MYL7 (ENSCLAG00000009648) POLD2 (ENSCLAG00000005092) AEBP1 (ENSCLAG00000005509) POLM (ENSCLAG00000007360) PGAM2 (ENSCLAG00000004577) ##22 DBNL (ENSCLAG00000005058) UBE2D4 (ENSCLAG00000005618) URGCP (ENSCLAG00000006286) MRPS24 (ENSCLAG00000004732) ENSCLAG00000004813 SEPTIN14 (ENSCLAG00000005493) ZNF713 (ENSCLAG00000007534) MRPS17 (ENSCLAG00000007650) NIPSNAP2 (ENSCLAG00000008451) PSPH (ENSCLAG00000008790) CCT6A (ENSCLAG00000004434) ENSCLAG00000005667 PHKG1 (ENSCLAG00000005270) CHCHD2 (ENSCLAG00000005594) NUPR2 (ENSCLAG00000005756) Degu MODERN SPECIES 76 ENSODEG00000013307 ENSODEG00000014266 ZMIZ2 (ENSODEG00000013173) OGDH (ENSODEG00000013491) TMED4 (ENSODEG00000013873) DDX56 (ENSODEG00000014807) NPC1L1 (ENSODEG00000014236) NUDCD3 (ENSODEG00000014835) CAMK2B (ENSODEG00000014782) ENSODEG00000014119 GCK (ENSODEG00000014198) MYL7 (ENSODEG00000014034) POLD2 (ENSODEG00000014406) AEBP1 (ENSODEG00000015327) POLM (ENSODEG00000015087) PGAM2 (ENSODEG00000014343) ##22 DBNL (ENSODEG00000014896) URGCP (ENSODEG00000015352) MRPS24 (ENSODEG00000016539) ENSODEG00000020219 SEPTIN14 (ENSODEG00000014211) ENSODEG00000015145 NIPSNAP2 (ENSODEG00000014015) PSPH (ENSODEG00000014742) ENSODEG00000014693 PHKG1 (ENSODEG00000014159) ENSODEG00000014564 ENSODEG00000020198 ENSODEG00000014101 GUSB (ENSODEG00000014869) ASL (ENSODEG00000014371) Guinea pig MODERN SPECIES 66 MYO1G (ENSCPOG00000027389) PURB (ENSCPOG00000033652) H2AZ2 (ENSCPOG00000036358) ENSCPOG00000002632 ZMIZ2 (ENSCPOG00000002214) OGDH (ENSCPOG00000003361) TMED4 (ENSCPOG00000030032) DDX56 (ENSCPOG00000003359) NUDCD3 (ENSCPOG00000032095) CAMK2B (ENSCPOG00000019961) YKT6 (ENSCPOG00000039668) GCK (ENSCPOG00000005392) POLD2 (ENSCPOG00000020753) AEBP1 (ENSCPOG00000006383) POLM (ENSCPOG00000014785) PGAM2 (ENSCPOG00000006665) ##22 DBNL (ENSCPOG00000006660) UBE2D4 (ENSCPOG00000038086) URGCP (ENSCPOG00000025608) MRPS24 (ENSCPOG00000036749) SEPTIN14 (ENSCPOG00000009996) ENSCPOG00000038154 NIPSNAP2 (ENSCPOG00000004556) PSPH (ENSCPOG00000039209) CCT6A (ENSCPOG00000006992) SUMF2 (ENSCPOG00000006993) PHKG1 (ENSCPOG00000000387) CHCHD2 (ENSCPOG00000012413) NUPR2 (ENSCPOG00000036999) VKORC1L1 (ENSCPOG00000040223) GUSB (ENSCPOG00000004691) Rodentia_B ANCESTRAL SPECIES 40 ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Kangaroo rat MODERN SPECIES 479 Myo1g (ENSDORG00000008897) ENSDORG00000000793 Zmiz2 (ENSDORG00000003702) Ogdh (ENSDORG00000014528) Tmed4 (ENSDORG00000025102) ENSDORG00000026173 Npc1l1 (ENSDORG00000004156) Nudcd3 (ENSDORG00000024793) Camk2b (ENSDORG00000016394) Ykt6 (ENSDORG00000016393) Gck (ENSDORG00000016392) Myl7 (ENSDORG00000016391) Pold2 (ENSDORG00000005386) Aebp1 (ENSDORG00000005385) Polm (ENSDORG00000006893) Pgam2 (ENSDORG00000024532) ##22 Dbnl (ENSDORG00000006890) Urgcp (ENSDORG00000009971) Mrps24 (ENSDORG00000028469) Myomorpha ANCESTRAL SPECIES 50 ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 Lesser Egyptian jerboa MODERN SPECIES 49 ENSJJAG00000012094 ENSJJAG00000015423 Zmiz2 (ENSJJAG00000023115) Ogdh (ENSJJAG00000007589) Tmed4 (ENSJJAG00000005100) Ddx56 (ENSJJAG00000014269) Npc1l1 (ENSJJAG00000019937) Nudcd3 (ENSJJAG00000024120) Camk2b (ENSJJAG00000012313) ENSJJAG00000024358 Gck (ENSJJAG00000020695) Myl7 (ENSJJAG00000023280) Pold2 (ENSJJAG00000013260) Aebp1 (ENSJJAG00000006815) Polm (ENSJJAG00000005659) Pgam2 (ENSJJAG00000006198) ##22 Dbnl (ENSJJAG00000019824) ENSJJAG00000013146 ENSJJAG00000016812 Mrps24 (ENSJJAG00000011276) Smg1 (ENSJJAG00000018008) ENSJJAG00000017362 ENSJJAG00000021154 Bmper (ENSJJAG00000009850) Bbs9 (ENSJJAG00000003244) Phtf2 (ENSJJAG00000007015) ENSJJAG00000012291 Rsbn1l (ENSJJAG00000017941) Ptpn12 (ENSJJAG00000023092) ENSJJAG00000004035 ENSJJAG00000009895 Muroidea ANCESTRAL SPECIES 39 ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Upper Galilee mountains blind mole rat MODERN SPECIES 869 ENSNGAG00000018529 Zmiz2 (ENSNGAG00000021083) Ogdh (ENSNGAG00000022300) ENSNGAG00000013628 Tmed4 (ENSNGAG00000014114) Ddx56 (ENSNGAG00000018785) Npc1l1 (ENSNGAG00000023026) Nudcd3 (ENSNGAG00000001892) Camk2b (ENSNGAG00000024309) Ykt6 (ENSNGAG00000021621) Gck (ENSNGAG00000022694) Myl7 (ENSNGAG00000010256) Pold2 (ENSNGAG00000023318) Aebp1 (ENSNGAG00000021547) Polm (ENSNGAG00000024068) Pgam2 (ENSNGAG00000022542) ##22 Dbnl (ENSNGAG00000001208) ENSNGAG00000021393 Urgcp (ENSNGAG00000020683) Mrps24 (ENSNGAG00000021383) ENSNGAG00000015149 Ccdc117 (ENSNGAG00000012546) ENSNGAG00000016645 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00950000183087.A.a.b.b.g.m.a.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Murinae ANCESTRAL SPECIES 12 ENSGT00950000183087.A.a.b.b.g.m.a.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Mus ANCESTRAL SPECIES 14 ENSGT00950000183087.A.a.b.b.g.m.a.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Mus_A ANCESTRAL SPECIES 2 ENSGT00950000183087.A.a.b.b.g.m.a.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.r ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Mus_B ANCESTRAL SPECIES 2 ENSGT00950000183087.A.a.b.b.g.m.a.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.r ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b.db.a ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Mus_C ANCESTRAL SPECIES 3 ENSGT00950000183087.A.a.b.b.g.m.a.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.r ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b.db.a ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 spretus MODERN SPECIES 2 Ppia (MGP_SPRETEiJ_G0016915) Zmiz2 (MGP_SPRETEiJ_G0016914) Ogdh (MGP_SPRETEiJ_G0016913) Tmed4 (MGP_SPRETEiJ_G0016912) Ddx56 (MGP_SPRETEiJ_G0016911) Npc1l1 (MGP_SPRETEiJ_G0016910) MGP_SPRETEiJ_G0016909 Nudcd3 (MGP_SPRETEiJ_G0016908) Camk2b (MGP_SPRETEiJ_G0016907) Ykt6 (MGP_SPRETEiJ_G0016906) Gck (MGP_SPRETEiJ_G0016905) Myl7 (MGP_SPRETEiJ_G0016904) Pold2 (MGP_SPRETEiJ_G0016903) Aebp1 (MGP_SPRETEiJ_G0016902) Polm (MGP_SPRETEiJ_G0016901) Pgam2 (MGP_SPRETEiJ_G0016900) ##22 Dbnl (MGP_SPRETEiJ_G0016899) Urgcp (MGP_SPRETEiJ_G0016898) Mrps24 (MGP_SPRETEiJ_G0016897) Ankrd36 (MGP_SPRETEiJ_G0016896) Ccdc117 (MGP_SPRETEiJ_G0016895) MGP_SPRETEiJ_G0016894 Znrf3 (MGP_SPRETEiJ_G0016893) Kremen1 (MGP_SPRETEiJ_G0016892) Emid1 (MGP_SPRETEiJ_G0016891) Rhbdd3 (MGP_SPRETEiJ_G0016890) Ewsr1 (MGP_SPRETEiJ_G0016889) Rasl10a (MGP_SPRETEiJ_G0016888) Gas2l1 (MGP_SPRETEiJ_G0016887) Ap1b1 (MGP_SPRETEiJ_G0016886) Nefh (MGP_SPRETEiJ_G0016885) Steppe mouse MODERN SPECIES 3215 H2az2 (ENSMSIG00000022792) ENSMSIG00000022760 Zmiz2 (ENSMSIG00000022569) Ogdh (ENSMSIG00000022343) Tmed4 (ENSMSIG00000022316) Ddx56 (ENSMSIG00000022266) Npc1l1 (ENSMSIG00000022038) Nudcd3 (ENSMSIG00000021993) Camk2b (ENSMSIG00000019343) ENSMSIG00000019289 Gck (ENSMSIG00000019231) Myl7 (ENSMSIG00000019206) Pold2 (ENSMSIG00000019181) Aebp1 (ENSMSIG00000019091) Polm (ENSMSIG00000019034) Pgam2 (ENSMSIG00000019017) ##22 Dbnl (ENSMSIG00000018944) ENSMSIG00000018927 Urgcp (ENSMSIG00000018825) ENSMSIG00000018806 Ankrd36 (ENSMSIG00000018767) Ccdc117 (ENSMSIG00000018735) ENSMSIG00000018714 ENSMSIG00000018656 Emid1 (ENSMSIG00000018580) Rhbdd3 (ENSMSIG00000018562) ENSMSIG00000017826 Rasl10a (ENSMSIG00000017813) Gas2l1 (ENSMSIG00000017768) ENSMSIG00000017746 Ap1b1 (ENSMSIG00000017256) Mouse MODERN SPECIES 2 H2az2 (ENSMUSG00000041126) Ppia (ENSMUSG00000071866) Zmiz2 (ENSMUSG00000041164) Ogdh (ENSMUSG00000020456) Tmed4 (ENSMUSG00000004394) Ddx56 (ENSMUSG00000004393) Npc1l1 (ENSMUSG00000020447) Nudcd3 (ENSMUSG00000053838) Camk2b (ENSMUSG00000057897) Ykt6 (ENSMUSG00000002741) Gck (ENSMUSG00000041798) Myl7 (ENSMUSG00000020469) Pold2 (ENSMUSG00000020471) Aebp1 (ENSMUSG00000020473) Polm (ENSMUSG00000020474) Pgam2 (ENSMUSG00000020475) ##22 Dbnl (ENSMUSG00000020476) Urgcp (ENSMUSG00000049680) Mrps24 (ENSMUSG00000020477) Ankrd36 (ENSMUSG00000020481) Ccdc117 (ENSMUSG00000020482) Xbp1 (ENSMUSG00000020484) Znrf3 (ENSMUSG00000041961) Kremen1 (ENSMUSG00000020393) Emid1 (ENSMUSG00000034164) Rhbdd3 (ENSMUSG00000034175) Ewsr1 (ENSMUSG00000009079) Rasl10a (ENSMUSG00000034209) Gas2l1 (ENSMUSG00000034201) Ap1b1 (ENSMUSG00000009090) Nefh (ENSMUSG00000020396) Ryukyu mouse MODERN SPECIES 2 H2az2 (MGP_CAROLIEiJ_G0016074) Zmiz2 (MGP_CAROLIEiJ_G0016072) Ogdh (MGP_CAROLIEiJ_G0016071) Tmed4 (MGP_CAROLIEiJ_G0016070) Ddx56 (MGP_CAROLIEiJ_G0016069) Npc1l1 (MGP_CAROLIEiJ_G0016068) MGP_CAROLIEiJ_G0016067 Nudcd3 (MGP_CAROLIEiJ_G0016066) Camk2b (MGP_CAROLIEiJ_G0016065) Ykt6 (MGP_CAROLIEiJ_G0016064) Gck (MGP_CAROLIEiJ_G0016063) Myl7 (MGP_CAROLIEiJ_G0016062) Pold2 (MGP_CAROLIEiJ_G0016061) Aebp1 (MGP_CAROLIEiJ_G0016060) Polm (MGP_CAROLIEiJ_G0016059) Pgam2 (MGP_CAROLIEiJ_G0016058) ##22 Dbnl (MGP_CAROLIEiJ_G0016057) Urgcp (MGP_CAROLIEiJ_G0016056) Mrps24 (MGP_CAROLIEiJ_G0016055) Ankrd36 (MGP_CAROLIEiJ_G0016054) Ccdc117 (MGP_CAROLIEiJ_G0016053) MGP_CAROLIEiJ_G0016052 Znrf3 (MGP_CAROLIEiJ_G0016051) Kremen1 (MGP_CAROLIEiJ_G0016050) Emid1 (MGP_CAROLIEiJ_G0016049) Rhbdd3 (MGP_CAROLIEiJ_G0016048) Ewsr1 (MGP_CAROLIEiJ_G0016047) Rasl10a (MGP_CAROLIEiJ_G0016046) Gas2l1 (MGP_CAROLIEiJ_G0016045) Ap1b1 (MGP_CAROLIEiJ_G0016044) Nefh (MGP_CAROLIEiJ_G0016043) Shrew mouse MODERN SPECIES 4 Ppia (MGP_PahariEiJ_G0016818) Zmiz2 (MGP_PahariEiJ_G0016819) Ogdh (MGP_PahariEiJ_G0016820) Tmed4 (MGP_PahariEiJ_G0016821) Ddx56 (MGP_PahariEiJ_G0016822) Npc1l1 (MGP_PahariEiJ_G0016823) MGP_PahariEiJ_G0016824 Nudcd3 (MGP_PahariEiJ_G0016825) Camk2b (MGP_PahariEiJ_G0016826) Ykt6 (MGP_PahariEiJ_G0016827) Gck (MGP_PahariEiJ_G0016828) Myl7 (MGP_PahariEiJ_G0016829) Pold2 (MGP_PahariEiJ_G0016830) Aebp1 (MGP_PahariEiJ_G0016831) Polm (MGP_PahariEiJ_G0016832) Pgam2 (MGP_PahariEiJ_G0016833) ##22 Dbnl (MGP_PahariEiJ_G0016834) Urgcp (MGP_PahariEiJ_G0016835) Mrps24 (MGP_PahariEiJ_G0016836) Ankrd36 (MGP_PahariEiJ_G0016837) Ccdc117 (MGP_PahariEiJ_G0016838) MGP_PahariEiJ_G0016839 Znrf3 (MGP_PahariEiJ_G0016840) Kremen1 (MGP_PahariEiJ_G0016841) Emid1 (MGP_PahariEiJ_G0016842) Rhbdd3 (MGP_PahariEiJ_G0016843) Ewsr1 (MGP_PahariEiJ_G0016844) Gas2l1 (MGP_PahariEiJ_G0016845) Rasl10a (MGP_PahariEiJ_G0016846) Ap1b1 (MGP_PahariEiJ_G0016847) Nefh (MGP_PahariEiJ_G0016848) Rat MODERN SPECIES 5 H2az2 (ENSRNOG00000052275) Ppia (ENSRNOG00000027864) Zmiz2 (ENSRNOG00000025923) Ogdh (ENSRNOG00000005130) Tmed4 (ENSRNOG00000005016) Ddx56 (ENSRNOG00000004670) Npc1l1 (ENSRNOG00000049955) Nudcd3 (ENSRNOG00000056148) Camk2b (ENSRNOG00000052080) Ykt6 (ENSRNOG00000014785) Gck (ENSRNOG00000061527) Myl7 (ENSRNOG00000014409) Pold2 (ENSRNOG00000014098) Aebp1 (ENSRNOG00000013720) Polm (ENSRNOG00000013647) Pgam2 (ENSRNOG00000013532) ##22 Dbnl (ENSRNOG00000012378) Urgcp (ENSRNOG00000012184) Mrps24 (ENSRNOG00000011979) ENSRNOG00000069799 AC136588.2 (ENSRNOG00000030988) Ankrd36 (ENSRNOG00000056767) Ccdc117 (ENSRNOG00000010706) Xbp1 (ENSRNOG00000010298) Znrf3 (ENSRNOG00000067305) Kremen1 (ENSRNOG00000051487) Emid1 (ENSRNOG00000033575) Rhbdd3 (ENSRNOG00000027032) Ewsr1 (ENSRNOG00000009437) Rasl10a (ENSRNOG00000008951) Gas2l1 (ENSRNOG00000009040) Cricetidae ANCESTRAL SPECIES 14 ENSGT00950000183087.A.a.b.b.g.m.a.a.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Cricetinae ANCESTRAL SPECIES 37 ENSGT00950000183087.A.a.b.b.g.m.a.a.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b Chinese hamster chok1gshd MODERN SPECIES 121 PPIA (ENSCGRG00001013904) Zmiz2 (ENSCGRG00001000371) Ogdh (ENSCGRG00001018679) Tmed4 (ENSCGRG00001020468) Ddx56 (ENSCGRG00001019019) Npc1l1 (ENSCGRG00001005429) ENSCGRG00001023520 Nudcd3 (ENSCGRG00001022901) Camk2b (ENSCGRG00001022679) Ykt6 (ENSCGRG00001017336) Gck (ENSCGRG00001009989) Myl7 (ENSCGRG00001016475) Pold2 (ENSCGRG00001012036) Aebp1 (ENSCGRG00001018686) Polm (ENSCGRG00001014159) Pgam2 (ENSCGRG00001023475) ##22 Dbnl (ENSCGRG00001011369) ENSCGRG00001015643 Urgcp (ENSCGRG00001010492) Mrps24 (ENSCGRG00001009085) ENSCGRG00001004440 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00950000183087.A.a.b.b.g.m.a.a.a.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00860000135606 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00940000153661.a.b.a.a.a.b ENSGT00390000005772 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00940000158390 ENSGT00940000161542 ENSGT00390000013711 ENSGT00940000154191.i.b ENSGT00940000154849.b ENSGT00940000162366 ENSGT00940000155991 Northern American deer mouse MODERN SPECIES 1 Purb (ENSPEMG00000014786) H2az2 (ENSPEMG00000013226) Zmiz2 (ENSPEMG00000010648) Ogdh (ENSPEMG00000001741) ENSPEMG00000030252 Tmed4 (ENSPEMG00000004413) Ddx56 (ENSPEMG00000018351) Npc1l1 (ENSPEMG00000014976) Nudcd3 (ENSPEMG00000014178) Camk2b (ENSPEMG00000000806) Ykt6 (ENSPEMG00000012487) Gck (ENSPEMG00000001040) Myl7 (ENSPEMG00000003767) Pold2 (ENSPEMG00000016023) Polm (ENSPEMG00000013953) Pgam2 (ENSPEMG00000016914) ##22 Dbnl (ENSPEMG00000002008) ENSPEMG00000010442 Urgcp (ENSPEMG00000018952) Mrps24 (ENSPEMG00000012062) ENSPEMG00000028247 ENSPEMG00000017379 ENSPEMG00000024821 ENSPEMG00000029702 Znrf3 (ENSPEMG00000005713) Kremen1 (ENSPEMG00000013999) Emid1 (ENSPEMG00000005971) Rhbdd3 (ENSPEMG00000006444) Ewsr1 (ENSPEMG00000018724) Gas2l1 (ENSPEMG00000014176) Rasl10a (ENSPEMG00000000799) Prairie vole MODERN SPECIES 89 ENSMOCG00000019036 Zmiz2 (ENSMOCG00000004069) Ogdh (ENSMOCG00000015048) Tmed4 (ENSMOCG00000018994) Ddx56 (ENSMOCG00000016782) Npc1l1 (ENSMOCG00000022891) ENSMOCG00000010822 Nudcd3 (ENSMOCG00000008685) Camk2b (ENSMOCG00000003054) Ykt6 (ENSMOCG00000015485) Gck (ENSMOCG00000007909) Myl7 (ENSMOCG00000001155) Pold2 (ENSMOCG00000020553) Aebp1 (ENSMOCG00000015924) Polm (ENSMOCG00000017650) Pgam2 (ENSMOCG00000017141) ##22 Dbnl (ENSMOCG00000010776) ENSMOCG00000007622 ENSMOCG00000019147 Mrps24 (ENSMOCG00000009358) ENSMOCG00000001805 Ccdc117 (ENSMOCG00000017474) ENSMOCG00000016607 Znrf3 (ENSMOCG00000007694) Kremen1 (ENSMOCG00000006589) Emid1 (ENSMOCG00000007842) Rhbdd3 (ENSMOCG00000020377) Ewsr1 (ENSMOCG00000013671) Rasl10a (ENSMOCG00000019931) Gas2l1 (ENSMOCG00000013252) Ap1b1 (ENSMOCG00000020166) Primates ANCESTRAL SPECIES 12 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 ENSGT00940000157116 Haplorrhini ANCESTRAL SPECIES 8 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 ENSGT00940000157116 Simiiformes ANCESTRAL SPECIES 12 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 Catarrhini ANCESTRAL SPECIES 6 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b Hominoidea ANCESTRAL SPECIES 6 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946.e ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 Hominidae ANCESTRAL SPECIES 11 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946.e ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 25 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946.e ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 Gorilla MODERN SPECIES 20 ZMIZ2 (ENSGGOG00000003051) OGDH (ENSGGOG00000010729) TMED4 (ENSGGOG00000012046) DDX56 (ENSGGOG00000012031) ENSGGOG00000009084 NPC1L1 (ENSGGOG00000027580) ENSGGOG00000025093 NUDCD3 (ENSGGOG00000001301) CAMK2B (ENSGGOG00000014826) YKT6 (ENSGGOG00000027036) GCK (ENSGGOG00000001501) MYL7 (ENSGGOG00000004911) POLD2 (ENSGGOG00000004424) AEBP1 (ENSGGOG00000004418) ENSGGOG00000004529 PGAM2 (ENSGGOG00000004527) ##22 DBNL (ENSGGOG00000004521) ENSGGOG00000022687 ENSGGOG00000043186 ENSGGOG00000037960 UBE2D4 (ENSGGOG00000042519) URGCP (ENSGGOG00000043726) MRPS24 (ENSGGOG00000005692) BLVRA (ENSGGOG00000001735) COA1 (ENSGGOG00000034928) ENSGGOG00000007657 HECW1 (ENSGGOG00000024448) MRPL32 (ENSGGOG00000027492) PSMA2 (ENSGGOG00000006538) C7orf25 (ENSGGOG00000002250) ENSGGOG00000037303 Homo/Pan group ANCESTRAL SPECIES 24 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946.e ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 Pan ANCESTRAL SPECIES 25 ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a.c ENSGT00940000159012 ENSGT00550000074946.e ENSGT00940000159904 ENSGT00940000153973.c.b ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT01040000241441 ENSGT00940000155142.i.b ENSGT00940000157852 ENSGT00390000002582 ENSGT00940000157866 ENSGT00940000157116 ENSGT00940000155925 ENSGT00550000074878.`b.b ENSGT00390000014722 ENSGT00550000074870.b.nc ENSGT00390000014996.y ENSGT00940000158294 ENSGT00900000143452 ENSGT00940000154014.a Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 20 NPC1L1 (ENSPTRG00000019146) ENSPTRG00000052427 NUDCD3 (ENSPTRG00000019144) CAMK2B (ENSPTRG00000051317) YKT6 (ENSPTRG00000019141) GCK (ENSPTRG00000019140) MYL7 (ENSPTRG00000019139) POLD2 (ENSPTRG00000019138) AEBP1 (ENSPTRG00000019137) POLM (ENSPTRG00000048404) ENSPTRG00000043134 ##22 DBNL (ENSPTRG00000019134) POLD2 (ENSPTRG00000046411) ENSPTRG00000052352 POLM (ENSPTRG00000019136) ENSPTRG00000051032 ##22 ENSPTRG00000047759 ENSPTRG00000050290 ENSPTRG00000028448 ENSPTRG00000039836 YAE1 (ENSPTRG00000019106) ENSPTRG00000052776 RALA (ENSPTRG00000019108) ENSPTRG00000050507 ENSPTRG00000034205 CDK13 (ENSPTRG00000019112) MPLKIP (ENSPTRG00000019113) SUGCT (ENSPTRG00000019114) INHBA (ENSPTRG00000044337) GLI3 (ENSPTRG00000019117) ENSPTRG00000046687 Chimpanzee MODERN SPECIES 20 PPIA (ENSPTRG00000046562) ZMIZ2 (ENSPTRG00000019150) OGDH (ENSPTRG00000019149) TMED4 (ENSPTRG00000019148) DDX56 (ENSPTRG00000019147) NPC1L1 (ENSPTRG00000019146) ENSPTRG00000052427 NUDCD3 (ENSPTRG00000019144) CAMK2B (ENSPTRG00000051317) YKT6 (ENSPTRG00000019141) GCK (ENSPTRG00000019140) MYL7 (ENSPTRG00000019139) POLD2 (ENSPTRG00000019138) AEBP1 (ENSPTRG00000019137) POLM (ENSPTRG00000048404) ENSPTRG00000043134 ##22 DBNL (ENSPTRG00000019134) POLD2 (ENSPTRG00000046411) ENSPTRG00000052352 POLM (ENSPTRG00000019136) ENSPTRG00000051032 ##22 ENSPTRG00000047759 ENSPTRG00000050290 ENSPTRG00000028448 ENSPTRG00000039836 YAE1 (ENSPTRG00000019106) ENSPTRG00000052776 RALA (ENSPTRG00000019108) ENSPTRG00000050507 ENSPTRG00000034205 CDK13 (ENSPTRG00000019112) Bonobo MODERN SPECIES 20 PPIA (ENSPPAG00000040793) ZMIZ2 (ENSPPAG00000036211) OGDH (ENSPPAG00000040167) TMED4 (ENSPPAG00000034880) DDX56 (ENSPPAG00000029147) NPC1L1 (ENSPPAG00000029235) ENSPPAG00000034668 NUDCD3 (ENSPPAG00000024525) CAMK2B (ENSPPAG00000033180) YKT6 (ENSPPAG00000019726) GCK (ENSPPAG00000030131) MYL7 (ENSPPAG00000038855) POLD2 (ENSPPAG00000029927) AEBP1 (ENSPPAG00000004827) POLM (ENSPPAG00000037663) PGAM2 (ENSPPAG00000033065) ##22 DBNL (ENSPPAG00000031811) ENSPPAG00000036366 RALA (ENSPPAG00000003692) CDK13 (ENSPPAG00000041831) MPLKIP (ENSPPAG00000037056) SUGCT (ENSPPAG00000042639) INHBA (ENSPPAG00000036866) GLI3 (ENSPPAG00000043020) ENSPPAG00000022173 ENSPPAG00000036468 C7orf25 (ENSPPAG00000040042) PSMA2 (ENSPPAG00000036019) MRPL32 (ENSPPAG00000039260) HECW1 (ENSPPAG00000030847) ENSPPAG00000004221 Human MODERN SPECIES 19 H2AZ2 (ENSG00000105968) PPIA (ENSG00000196262) ZMIZ2 (ENSG00000122515) OGDH (ENSG00000105953) TMED4 (ENSG00000158604) DDX56 (ENSG00000136271) NPC1L1 (ENSG00000015520) NUDCD3 (ENSG00000015676) CAMK2B (ENSG00000058404) YKT6 (ENSG00000106636) GCK (ENSG00000106633) MYL7 (ENSG00000106631) POLD2 (ENSG00000106628) AEBP1 (ENSG00000106624) POLM (ENSG00000122678) PGAM2 (ENSG00000164708) ##22 DBNL (ENSG00000136279) SPDYE1 (ENSG00000136206) UBE2D4 (ENSG00000078967) URGCP (ENSG00000106608) URGCP-MRPS24 (ENSG00000270617) MRPS24 (ENSG00000062582) BLVRA (ENSG00000106605) COA1 (ENSG00000106603) STK17A (ENSG00000164543) HECW1 (ENSG00000002746) MRPL32 (ENSG00000106591) PSMA2 (ENSG00000106588) ENSG00000256646 C7orf25 (ENSG00000136197) GLI3 (ENSG00000106571) Orangutan MODERN SPECIES 20 H2AZ2 (ENSPPYG00000017585) PPIA (ENSPPYG00000017586) ZMIZ2 (ENSPPYG00000017588) OGDH (ENSPPYG00000017589) TMED4 (ENSPPYG00000017590) DDX56 (ENSPPYG00000017591) NPC1L1 (ENSPPYG00000017592) NUDCD3 (ENSPPYG00000017593) CAMK2B (ENSPPYG00000017594) YKT6 (ENSPPYG00000017595) GCK (ENSPPYG00000017596) MYL7 (ENSPPYG00000033846) POLD2 (ENSPPYG00000017597) AEBP1 (ENSPPYG00000030504) ENSPPYG00000017598 PGAM2 (ENSPPYG00000017599) ##22 DBNL (ENSPPYG00000017600) ENSPPYG00000038796 URGCP (ENSPPYG00000017603) MRPS24 (ENSPPYG00000017604) BLVRA (ENSPPYG00000017605) COA1 (ENSPPYG00000017606) STK17A (ENSPPYG00000017607) HECW1 (ENSPPYG00000017608) MRPL32 (ENSPPYG00000017611) PSMA2 (ENSPPYG00000030380) C7orf25 (ENSPPYG00000034147) GLI3 (ENSPPYG00000017613) INHBA (ENSPPYG00000038204) SUGCT (ENSPPYG00000017615) MPLKIP (ENSPPYG00000017617) Gibbon MODERN SPECIES 7 H2AZ2 (ENSNLEG00000004039) PPIA (ENSNLEG00000004024) ZMIZ2 (ENSNLEG00000028725) OGDH (ENSNLEG00000003931) ENSNLEG00000029010 DDX56 (ENSNLEG00000003816) NPC1L1 (ENSNLEG00000003753) NUDCD3 (ENSNLEG00000003732) CAMK2B (ENSNLEG00000003715) YKT6 (ENSNLEG00000003689) GCK (ENSNLEG00000028208) MYL7 (ENSNLEG00000003674) POLD2 (ENSNLEG00000003570) ENSNLEG00000003564 ENSNLEG00000003555 PGAM2 (ENSNLEG00000003550) ##22 DBNL (ENSNLEG00000003395) UBE2D4 (ENSNLEG00000003364) URGCP (ENSNLEG00000003351) ENSNLEG00000026683 MRPS24 (ENSNLEG00000033007) BLVRA (ENSNLEG00000003333) COA1 (ENSNLEG00000003316) STK17A (ENSNLEG00000003304) ENSNLEG00000035608 HECW1 (ENSNLEG00000003209) MRPL32 (ENSNLEG00000027404) PSMA2 (ENSNLEG00000003177) ENSNLEG00000027384 C7orf25 (ENSNLEG00000003174) GLI3 (ENSNLEG00000003160) Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b Vervet Monkey MODERN SPECIES 13 H2AZ2 (ENSCSAG00000015697) PPIA (ENSCSAG00000015690) ZMIZ2 (ENSCSAG00000015673) OGDH (ENSCSAG00000015662) TMED4 (ENSCSAG00000015650) DDX56 (ENSCSAG00000015636) NPC1L1 (ENSCSAG00000015627) NUDCD3 (ENSCSAG00000015602) CAMK2B (ENSCSAG00000015599) YKT6 (ENSCSAG00000015593) GCK (ENSCSAG00000015587) MYL7 (ENSCSAG00000015580) POLD2 (ENSCSAG00000015565) AEBP1 (ENSCSAG00000015516) POLM (ENSCSAG00000015486) PGAM2 (ENSCSAG00000015481) ##22 DBNL (ENSCSAG00000015475) UBE2D4 (ENSCSAG00000015467) URGCP (ENSCSAG00000015454) MRPS24 (ENSCSAG00000015447) BLVRA (ENSCSAG00000015441) COA1 (ENSCSAG00000015432) STK17A (ENSCSAG00000015428) HECW1 (ENSCSAG00000015421) ENSCSAG00000015403 PSMA2 (ENSCSAG00000015394) C7orf25 (ENSCSAG00000015390) ENSCSAG00000015385 ENSCSAG00000019599 GLI3 (ENSCSAG00000015361) INHBA (ENSCSAG00000015294) Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b Macaca ANCESTRAL SPECIES 3 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00940000163323.c.a ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 Pig-tailed macaque MODERN SPECIES 212 H2AZ2 (ENSMNEG00000034878) ENSMNEG00000031080 ZMIZ2 (ENSMNEG00000029115) OGDH (ENSMNEG00000037375) TMED4 (ENSMNEG00000043518) DDX56 (ENSMNEG00000028492) NPC1L1 (ENSMNEG00000042016) NUDCD3 (ENSMNEG00000032656) CAMK2B (ENSMNEG00000038861) YKT6 (ENSMNEG00000036461) GCK (ENSMNEG00000036780) MYL7 (ENSMNEG00000029278) POLD2 (ENSMNEG00000032635) ENSMNEG00000042467 POLM (ENSMNEG00000032354) PGAM2 (ENSMNEG00000034644) ##22 DBNL (ENSMNEG00000043760) ENSMNEG00000038254 UBE2D4 (ENSMNEG00000038205) URGCP (ENSMNEG00000005790) MRPS24 (ENSMNEG00000044096) BLVRA (ENSMNEG00000036114) COA1 (ENSMNEG00000035017) STK17A (ENSMNEG00000040471) ENSMNEG00000037947 ENSMNEG00000033977 HECW1 (ENSMNEG00000028314) MRPL32 (ENSMNEG00000042550) PSMA2 (ENSMNEG00000043089) C7orf25 (ENSMNEG00000038920) ENSMNEG00000034098 Macaca_a ANCESTRAL SPECIES 7 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00940000163323.c.a ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 ENSGT00940000157116 Crab-eating macaque MODERN SPECIES 13 H2AZ2 (ENSMFAG00000040562) ENSMFAG00000058017 ZMIZ2 (ENSMFAG00000003941) OGDH (ENSMFAG00000042097) TMED4 (ENSMFAG00000035764) DDX56 (ENSMFAG00000041001) NPC1L1 (ENSMFAG00000043097) NUDCD3 (ENSMFAG00000037323) ENSMFAG00000003145 YKT6 (ENSMFAG00000036001) GCK (ENSMFAG00000043774) MYL7 (ENSMFAG00000038137) POLD2 (ENSMFAG00000042401) AEBP1 (ENSMFAG00000046276) POLM (ENSMFAG00000043995) PGAM2 (ENSMFAG00000048956) ##22 DBNL (ENSMFAG00000032367) ENSMFAG00000000260 URGCP (ENSMFAG00000034049) MRPS24 (ENSMFAG00000003446) COA1 (ENSMFAG00000039026) BLVRA (ENSMFAG00000036162) STK17A (ENSMFAG00000043073) ENSMFAG00000055954 HECW1 (ENSMFAG00000003543) ENSMFAG00000056799 MRPL32 (ENSMFAG00000041218) PSMA2 (ENSMFAG00000032277) C7orf25 (ENSMFAG00000027286) ENSMFAG00000056967 ENSMFAG00000057391 Rhesus MODERN SPECIES 13 ZMIZ2 (ENSMMUG00000002652) ENSMMUG00000064180 OGDH (ENSMMUG00000002651) TMED4 (ENSMMUG00000002650) DDX56 (ENSMMUG00000002645) NPC1L1 (ENSMMUG00000000782) ENSMMUG00000063623 CAMK2B (ENSMMUG00000002433) YKT6 (ENSMMUG00000002430) GCK (ENSMMUG00000002427) DBNL (ENSMMUG00000002411) MYL7 (ENSMMUG00000002426) POLD2 (ENSMMUG00000002423) AEBP1 (ENSMMUG00000002422) POLM (ENSMMUG00000002421) PGAM2 (ENSMMUG00000064860) ##22 URGCP (ENSMMUG00000002408) COA1 (ENSMMUG00000019023) BLVRA (ENSMMUG00000017382) STK17A (ENSMMUG00000019022) HECW1 (ENSMMUG00000019015) ENSMMUG00000057956 ENSMMUG00000049363 MRPL32 (ENSMMUG00000060273) PSMA2 (ENSMMUG00000022451) C3H7orf25 (ENSMMUG00000022449) ENSMMUG00000051741 ENSMMUG00000052530 GLI3 (ENSMMUG00000013614) INHBA (ENSMMUG00000061466) ENSMMUG00000054924 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 ENSGT00940000157116 Olive baboon MODERN SPECIES 14 ENSPANG00000040992 ENSPANG00000029569 ZMIZ2 (ENSPANG00000007148) OGDH (ENSPANG00000026232) TMED4 (ENSPANG00000041568) DDX56 (ENSPANG00000002446) NPC1L1 (ENSPANG00000014131) NUDCD3 (ENSPANG00000033313) CAMK2B (ENSPANG00000006925) ENSPANG00000051222 GCK (ENSPANG00000021695) MYL7 (ENSPANG00000043698) POLD2 (ENSPANG00000007078) ENSPANG00000002445 POLM (ENSPANG00000023968) PGAM2 (ENSPANG00000014548) ##22 DBNL (ENSPANG00000019050) URGCP (ENSPANG00000023114) BLVRA (ENSPANG00000007077) COA1 (ENSPANG00000041899) STK17A (ENSPANG00000022843) HECW1 (ENSPANG00000022845) ENSPANG00000043395 MRPL32 (ENSPANG00000023966) PSMA2 (ENSPANG00000007348) C7orf25 (ENSPANG00000040755) ENSPANG00000041647 ENSPANG00000050641 GLI3 (ENSPANG00000014545) INHBA (ENSPANG00000000357) ENSPANG00000041607 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00950000183162.a.b ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.a.a.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915.e.a ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b ENSGT00940000155925 ENSGT00940000157116 Sooty mangabey MODERN SPECIES 252 PURB (ENSCATG00000021124) H2AZ2 (ENSCATG00000001553) ENSCATG00000035746 ZMIZ2 (ENSCATG00000036431) OGDH (ENSCATG00000043101) TMED4 (ENSCATG00000036933) DDX56 (ENSCATG00000039389) NPC1L1 (ENSCATG00000034769) NUDCD3 (ENSCATG00000033255) CAMK2B (ENSCATG00000033919) YKT6 (ENSCATG00000037272) GCK (ENSCATG00000038208) POLD2 (ENSCATG00000040619) ENSCATG00000045184 POLM (ENSCATG00000019986) PGAM2 (ENSCATG00000024470) ##22 DBNL (ENSCATG00000029728) ENSCATG00000021056 UBE2D4 (ENSCATG00000030978) ENSCATG00000031150 URGCP (ENSCATG00000031265) MRPS24 (ENSCATG00000033132) BLVRA (ENSCATG00000043396) COA1 (ENSCATG00000044042) STK17A (ENSCATG00000033831) ENSCATG00000020670 HECW1 (ENSCATG00000043550) MRPL32 (ENSCATG00000038411) PSMA2 (ENSCATG00000029633) C7orf25 (ENSCATG00000032582) ENSCATG00000030767 Drill MODERN SPECIES 869 MYO1G (ENSMLEG00000043934) H2AZ2 (ENSMLEG00000035764) ENSMLEG00000034936 ZMIZ2 (ENSMLEG00000029695) OGDH (ENSMLEG00000042919) TMED4 (ENSMLEG00000042939) DDX56 (ENSMLEG00000043591) NPC1L1 (ENSMLEG00000029100) NUDCD3 (ENSMLEG00000008476) CAMK2B (ENSMLEG00000027867) YKT6 (ENSMLEG00000033734) GCK (ENSMLEG00000039475) POLD2 (ENSMLEG00000040033) AEBP1 (ENSMLEG00000031639) POLM (ENSMLEG00000044393) PGAM2 (ENSMLEG00000035459) ##22 DBNL (ENSMLEG00000032797) ENSMLEG00000039994 URGCP (ENSMLEG00000005986) MRPS24 (ENSMLEG00000039159) BLVRA (ENSMLEG00000040925) COA1 (ENSMLEG00000034935) STK17A (ENSMLEG00000030915) ENSMLEG00000000878 HECW1 (ENSMLEG00000029911) Rhinopithecus ANCESTRAL SPECIES 126 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g.e.b.b.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915.f ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00390000014996.y ENSGT00550000074870.b.nc ENSGT00390000014722 ENSGT00550000074878.`b.b Golden snub-nosed monkey MODERN SPECIES 1797 PURB (ENSRROG00000000118) H2AZ2 (ENSRROG00000036393) PPIA (ENSRROG00000015742) ZMIZ2 (ENSRROG00000033224) OGDH (ENSRROG00000031910) TMED4 (ENSRROG00000041322) DDX56 (ENSRROG00000044428) NPC1L1 (ENSRROG00000040884) NUDCD3 (ENSRROG00000014276) CAMK2B (ENSRROG00000040951) YKT6 (ENSRROG00000044282) GCK (ENSRROG00000035669) POLD2 (ENSRROG00000044307) AEBP1 (ENSRROG00000041649) POLM (ENSRROG00000032525) PGAM2 (ENSRROG00000039506) ##22 DBNL (ENSRROG00000040794) ENSRROG00000012365 ENSRROG00000033214 URGCP (ENSRROG00000022418) MRPS24 (ENSRROG00000043231) Black snub-nosed monkey MODERN SPECIES 1199 YKT6 (ENSRBIG00000037437) GCK (ENSRBIG00000034645) MYL7 (ENSRBIG00000041967) POLD2 (ENSRBIG00000036987) AEBP1 (ENSRBIG00000037140) POLM (ENSRBIG00000042241) PGAM2 (ENSRBIG00000034848) ##22 DBNL (ENSRBIG00000034629) ENSRBIG00000009757 ENSRBIG00000040351 URGCP (ENSRBIG00000032716) BLVRA (ENSRBIG00000029337) COA1 (ENSRBIG00000023583) STK17A (ENSRBIG00000033570) HECW1 (ENSRBIG00000042909) Platyrrhini ANCESTRAL SPECIES 10 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a.h.c.b.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.m ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00530000063426.b.b.b ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722.c ENSGT00940000155925 Cebidae ANCESTRAL SPECIES 9 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a.h.c.b.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.m ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00910000144211.n.b ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722.c ENSGT00940000155925 Cebidae_a ANCESTRAL SPECIES 7 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a.h.c.b.a.b ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.k ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00910000147095 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179.m ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00900000143452 ENSGT00940000158294 ENSGT00910000144211.n.b ENSGT00390000014996 ENSGT00550000074870.b.nc ENSGT00390000014722.c ENSGT00940000155925 Bolivian squirrel monkey MODERN SPECIES 82 ENSSBOG00000035081 ZMIZ2 (ENSSBOG00000032470) OGDH (ENSSBOG00000032539) TMED4 (ENSSBOG00000032356) DDX56 (ENSSBOG00000034339) ENSSBOG00000027505 NPC1L1 (ENSSBOG00000031878) NUDCD3 (ENSSBOG00000030729) CAMK2B (ENSSBOG00000031179) YKT6 (ENSSBOG00000012145) GCK (ENSSBOG00000000143) MYL7 (ENSSBOG00000021992) POLD2 (ENSSBOG00000033855) AEBP1 (ENSSBOG00000023002) POLM (ENSSBOG00000026333) PGAM2 (ENSSBOG00000031111) ##22 DBNL (ENSSBOG00000027972) UBE2D4 (ENSSBOG00000034793) URGCP (ENSSBOG00000020021) ENSSBOG00000028274 BLVRA (ENSSBOG00000030897) COA1 (ENSSBOG00000023098) STK17A (ENSSBOG00000022665) HECW1 (ENSSBOG00000022224) ENSSBOG00000031237 ENSSBOG00000023091 MRPL32 (ENSSBOG00000029277) PSMA2 (ENSSBOG00000019977) ENSSBOG00000033820 GLI3 (ENSSBOG00000020504) INHBA (ENSSBOG00000021061) Capuchin MODERN SPECIES 546 NUDCD3 (ENSCCAG00000031094) CAMK2B (ENSCCAG00000029763) YKT6 (ENSCCAG00000026854) GCK (ENSCCAG00000027953) MYL7 (ENSCCAG00000034593) POLD2 (ENSCCAG00000023591) AEBP1 (ENSCCAG00000027385) POLM (ENSCCAG00000034931) PGAM2 (ENSCCAG00000020406) ##22 DBNL (ENSCCAG00000024783) ENSCCAG00000029289 UBE2D4 (ENSCCAG00000024405) URGCP (ENSCCAG00000033948) MRPS24 (ENSCCAG00000023789) BLVRA (ENSCCAG00000028614) COA1 (ENSCCAG00000030094) STK17A (ENSCCAG00000036249) ENSCCAG00000003717 HECW1 (ENSCCAG00000036579) Marmoset MODERN SPECIES 20 H2AZ2 (ENSCJAG00000011953) ENSCJAG00000011969 ZMIZ2 (ENSCJAG00000011984) OGDH (ENSCJAG00000012021) TMED4 (ENSCJAG00000012217) DDX56 (ENSCJAG00000012233) NPC1L1 (ENSCJAG00000012318) NUDCD3 (ENSCJAG00000008208) CAMK2B (ENSCJAG00000008079) ENSCJAG00000040988 GCK (ENSCJAG00000008025) MYL7 (ENSCJAG00000008015) POLD2 (ENSCJAG00000007954) AEBP1 (ENSCJAG00000007936) ENSCJAG00000007934 PGAM2 (ENSCJAG00000007923) ##22 ENSCJAG00000007899 URGCP (ENSCJAG00000007849) ENSCJAG00000007842 BLVRA (ENSCJAG00000007829) COA1 (ENSCJAG00000007826) STK17A (ENSCJAG00000007799) ENSCJAG00000078337 HECW1 (ENSCJAG00000007768) ENSCJAG00000082260 ENSCJAG00000062733 MRPL32 (ENSCJAG00000007749) PSMA2 (ENSCJAG00000039517) C7orf25 (ENSCJAG00000007729) GLI3 (ENSCJAG00000007690) INHBA (ENSCJAG00000007682) Mas night monkey MODERN SPECIES 867 NUDCD3 (ENSANAG00000029361) CAMK2B (ENSANAG00000030017) YKT6 (ENSANAG00000015863) GCK (ENSANAG00000028532) MYL7 (ENSANAG00000023612) POLD2 (ENSANAG00000027652) AEBP1 (ENSANAG00000024351) POLM (ENSANAG00000025140) PGAM2 (ENSANAG00000020857) ##22 DBNL (ENSANAG00000027306) UBE2D4 (ENSANAG00000029203) URGCP (ENSANAG00000014118) ENSANAG00000027880 Tarsier MODERN SPECIES 4231 NUDCD3 (ENSTSYG00000008598) CAMK2B (ENSTSYG00000012581) YKT6 (ENSTSYG00000005835) GCK (ENSTSYG00000007022) MYL7 (ENSTSYG00000011012) POLD2 (ENSTSYG00000011007) AEBP1 (ENSTSYG00000031939) POLM (ENSTSYG00000010327) PGAM2 (ENSTSYG00000006825) ##22 DBNL (ENSTSYG00000009066) UBE2D4 (ENSTSYG00000027924) URGCP (ENSTSYG00000026474) BLVRA (ENSTSYG00000030197) Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294.a ENSGT00900000143452 ENSGT00940000158294.b ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.b.g ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294.a ENSGT00900000143452 ENSGT00940000158294.b ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 Mouse lemur MODERN SPECIES 2 H2AZ2 (ENSMICG00000008792) ENSMICG00000027555 ZMIZ2 (ENSMICG00000003918) OGDH (ENSMICG00000015987) TMED4 (ENSMICG00000005557) DDX56 (ENSMICG00000005550) NPC1L1 (ENSMICG00000005536) NUDCD3 (ENSMICG00000003284) CAMK2B (ENSMICG00000004015) YKT6 (ENSMICG00000004010) GCK (ENSMICG00000013503) MYL7 (ENSMICG00000004005) ENSMICG00000013459 AEBP1 (ENSMICG00000013400) POLM (ENSMICG00000013358) PGAM2 (ENSMICG00000013345) ##22 DBNL (ENSMICG00000013311) ENSMICG00000013289 URGCP (ENSMICG00000030783) MRPS24 (ENSMICG00000043303) BLVRA (ENSMICG00000007284) COA1 (ENSMICG00000013834) STK17A (ENSMICG00000047496) ENSMICG00000047051 HECW1 (ENSMICG00000001053) ENSMICG00000045915 PSMA2 (ENSMICG00000017286) C7orf25 (ENSMICG00000017285) GLI3 (ENSMICG00000010785) INHBA (ENSMICG00000033429) YAE1 (ENSMICG00000042079) Lemuriformes_a ANCESTRAL SPECIES 94 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a.h ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000160915 ENSGT00940000154390.A.j ENSGT00390000011179 ENSGT00390000011072 ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294.b ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00960000190657 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 Coquerels sifaka MODERN SPECIES 361 H2AZ2 (ENSPCOG00000018252) ENSPCOG00000028123 ZMIZ2 (ENSPCOG00000025600) OGDH (ENSPCOG00000025741) ENSPCOG00000017663 DDX56 (ENSPCOG00000024864) NPC1L1 (ENSPCOG00000027497) NUDCD3 (ENSPCOG00000013041) CAMK2B (ENSPCOG00000014854) YKT6 (ENSPCOG00000016771) GCK (ENSPCOG00000021845) MYL7 (ENSPCOG00000027788) POLD2 (ENSPCOG00000023991) AEBP1 (ENSPCOG00000014510) POLM (ENSPCOG00000013792) PGAM2 (ENSPCOG00000015813) ##22 DBNL (ENSPCOG00000025819) ENSPCOG00000028067 URGCP (ENSPCOG00000026370) MRPS24 (ENSPCOG00000015625) BLVRA (ENSPCOG00000028055) COA1 (ENSPCOG00000013220) STK17A (ENSPCOG00000023716) HECW1 (ENSPCOG00000012498) MRPL32 (ENSPCOG00000020168) PSMA2 (ENSPCOG00000025748) C7orf25 (ENSPCOG00000021972) Greater bamboo lemur MODERN SPECIES 241 ENSPSMG00000021440 ZMIZ2 (ENSPSMG00000021326) OGDH (ENSPSMG00000020942) TMED4 (ENSPSMG00000020530) DDX56 (ENSPSMG00000020497) NPC1L1 (ENSPSMG00000020447) NUDCD3 (ENSPSMG00000020362) CAMK2B (ENSPSMG00000018309) YKT6 (ENSPSMG00000016728) GCK (ENSPSMG00000016706) MYL7 (ENSPSMG00000016635) POLD2 (ENSPSMG00000016620) AEBP1 (ENSPSMG00000016602) POLM (ENSPSMG00000016557) ENSPSMG00000016529 PGAM2 (ENSPSMG00000016519) ##22 DBNL (ENSPSMG00000016466) UBE2D4 (ENSPSMG00000016250) URGCP (ENSPSMG00000016242) ENSPSMG00000016188 BLVRA (ENSPSMG00000016166) COA1 (ENSPSMG00000016121) ENSPSMG00000016103 STK17A (ENSPSMG00000016095) ENSPSMG00000016059 Bushbaby MODERN SPECIES 234 ENSOGAG00000027997 ZMIZ2 (ENSOGAG00000001208) OGDH (ENSOGAG00000002776) TMED4 (ENSOGAG00000009985) DDX56 (ENSOGAG00000009981) NPC1L1 (ENSOGAG00000030638) ENSOGAG00000031987 NUDCD3 (ENSOGAG00000009560) CAMK2B (ENSOGAG00000025215) YKT6 (ENSOGAG00000006454) GCK (ENSOGAG00000013533) MYL7 (ENSOGAG00000013527) POLD2 (ENSOGAG00000006720) AEBP1 (ENSOGAG00000007419) POLM (ENSOGAG00000006715) PGAM2 (ENSOGAG00000006713) ##22 DBNL (ENSOGAG00000006706) UBE2D4 (ENSOGAG00000004018) URGCP (ENSOGAG00000001595) MRPS24 (ENSOGAG00000001593) BLVRA (ENSOGAG00000001591) COA1 (ENSOGAG00000006944) STK17A (ENSOGAG00000033031) HECW1 (ENSOGAG00000013436) MRPL32 (ENSOGAG00000016806) PSMA2 (ENSOGAG00000016805) C7orf25 (ENSOGAG00000016804) GLI3 (ENSOGAG00000012651) INHBA (ENSOGAG00000003846) ENSOGAG00000025676 MPLKIP (ENSOGAG00000014138) Atlantogenata ANCESTRAL SPECIES 7 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Xenarthra ANCESTRAL SPECIES 771 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 Armadillo MODERN SPECIES 1849 GCK (ENSDNOG00000015156) MYL7 (ENSDNOG00000032380) POLD2 (ENSDNOG00000044199) AEBP1 (ENSDNOG00000048568) POLM (ENSDNOG00000005765) PGAM2 (ENSDNOG00000024480) ##22 DBNL (ENSDNOG00000024838) Afrotheria ANCESTRAL SPECIES 148 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Tenrec MODERN SPECIES 3228 PGAM2 (ENSETEG00000002564) ##22 DBNL (ENSETEG00000002558) Afrotheria_a ANCESTRAL SPECIES 152 ENSGT00900000140979.a.b ENSGT00950000183087.A.a.b.a ENSGT01030000234539.b.b.a ENSGT00950000183125.b.a.a ENSGT00940000159012 ENSGT00550000074946 ENSGT00940000159904 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164 ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00950000182926.b.c ##22 ENSGT00940000156732 ENSGT00940000154390.A.j ENSGT00390000011179 Hyrax MODERN SPECIES 2631 PGAM2 (ENSPCAG00000002181) ##22 DBNL (ENSPCAG00000002123) Elephant MODERN SPECIES 491 H2AZ2 (ENSLAFG00000006180) ENSLAFG00000011345 ZMIZ2 (ENSLAFG00000010282) OGDH (ENSLAFG00000013723) TMED4 (ENSLAFG00000018216) DDX56 (ENSLAFG00000018206) NPC1L1 (ENSLAFG00000018200) NUDCD3 (ENSLAFG00000012250) CAMK2B (ENSLAFG00000012840) YKT6 (ENSLAFG00000012838) GCK (ENSLAFG00000020833) MYL7 (ENSLAFG00000022961) POLD2 (ENSLAFG00000022905) AEBP1 (ENSLAFG00000014436) POLM (ENSLAFG00000010390) PGAM2 (ENSLAFG00000026429) ##22 DBNL (ENSLAFG00000004682) URGCP (ENSLAFG00000031339) MRPS24 (ENSLAFG00000011905) GPRIN2 (ENSLAFG00000016467) ENSLAFG00000016206 SHLD2 (ENSLAFG00000022147) ENSLAFG00000012059 ENSLAFG00000011199 SNCG (ENSLAFG00000032751) MMRN2 (ENSLAFG00000012825) BMPR1A (ENSLAFG00000005832) LDB3 (ENSLAFG00000006009) OPN4 (ENSLAFG00000006004) ENSLAFG00000011624 ENSLAFG00000023317 Cyclostomata ANCESTRAL SPECIES 189 ENSGT00950000182926.b #22 ENSGT00940000155032.a ENSGT00510000047420 Lamprey MODERN SPECIES 546 pgam2 (ENSPMAG00000008358) #22 zdhhc16a (ENSPMAG00000008343) ENSPMAG00000008336 TRPV6 (ENSPMAG00000008331) pxylp1 (ENSPMAG00000008325) sinhcafl (ENSPMAG00000008320) psmd13 (ENSPMAG00000008290) rpl10a (ENSPMAG00000008233) ENSPMAG00000008214 ENSPMAG00000008211 Hagfish MODERN SPECIES 20 ENSEBUG00000007326 pgam2 (ENSEBUG00000010813) #22 ENSEBUG00000008252 smyd5 (ENSEBUG00000001585) ubtd2 (ENSEBUG00000003243) ndufa10 (ENSEBUG00000014980) ENSEBUG00000004358 tnksb (ENSEBUG00000014360) ENSEBUG00000007528 ENSEBUG00000014012 ENSEBUG00000007890 ENSEBUG00000014147 ENSEBUG00000000684 Ciona ANCESTRAL SPECIES 99 ENSGT00940000167355 ENSGT00950000182926.b #22 ENSGT00940000153528.b ENSGT00390000018651 ENSGT00530000063681 ENSGT00940000170345 Ciona savignyi MODERN SPECIES 30 ENSCSAVG00000001946 ENSCSAVG00000001945 ENSCSAVG00000001942 ENSCSAVG00000001889 ENSCSAVG00000001888 ENSCSAVG00000001885 ENSCSAVG00000001882 ENSCSAVG00000001880 ENSCSAVG00000001878 ENSCSAVG00000001874 ENSCSAVG00000001870 ENSCSAVG00000001869 ENSCSAVG00000001859 ENSCSAVG00000001855 ENSCSAVG00000001849 ENSCSAVG00000001846 #22 ENSCSAVG00000001839 ENSCSAVG00000001836 ENSCSAVG00000001827 ENSCSAVG00000001824 ENSCSAVG00000001822 ENSCSAVG00000001820 ENSCSAVG00000001814 ENSCSAVG00000001808 ENSCSAVG00000001803 ENSCSAVG00000001799 ENSCSAVG00000001798 ENSCSAVG00000001760 ENSCSAVG00000001755 ENSCSAVG00000001752 ENSCSAVG00000001745 Ciona intestinalis MODERN SPECIES 9 zf(c2h2)-24 (ENSCING00000012142) ENSCING00000008138 ENSCING00000012143 ENSCING00000008136 ENSCING00000008132 ENSCING00000012145 ENSCING00000022244 ENSCING00000008131 ENSCING00000022941 ENSCING00000019344 ENSCING00000012146 ENSCING00000021962 ENSCING00000012148 ENSCING00000018201 ENSCING00000009910 ENSCING00000008129 #22 ENSCING00000022453 ENSCING00000023230 ENSCING00000023088 ENSCING00000012150 ENSCING00000024672 ENSCING00000012152 ENSCING00000018715 ENSCING00000019237 ENSCING00000009908 ENSCING00000008124 ENSCING00000023006 gp130-like (ENSCING00000008123) ENSCING00000021870 ENSCING00000018972 ENSCING00000012153 Ecdysozoa ANCESTRAL SPECIES ENSGT00950000182926.b #22 Fruitfly DUPLICATION Fruitfly MODERN SPECIES 19 CG11843 (FBgn0039630) Sirt7 (FBgn0039631) Cul5 (FBgn0039632) Bicra (FBgn0039633) alpha-Man-Ib (FBgn0039634) Pdhb (FBgn0039635) Atg14 (FBgn0039636) yem (FBgn0005596) Ctl2 (FBgn0039637) dgt6 (FBgn0039638) Vha100-1 (FBgn0028671) Alg13 (FBgn0039639) superdeath (FBgn0039640) CG14511 (FBgn0039641) CG11882 (FBgn0039642) Pglym78 (FBgn0014869) #22 eIF2D (FBgn0041588) Slbp (FBgn0041186) Rpn2 (FBgn0028692) rdog (FBgn0039644) CG11898 (FBgn0039645) jus (FBgn0039647) CG14515 (FBgn0039648) CG11899 (FBgn0014427) Mesh1 (FBgn0039650) Cyt-c1L (FBgn0039651) eEF1gamma (FBgn0029176) Cisd2 (FBgn0062442) Brd8 (FBgn0039654) CG14507 (FBgn0039655) Usp1 (FBgn0028476) Fruitfly MODERN SPECIES 19 MBD-R2 (FBgn0038016) CG10041 (FBgn0038014) CG10038 (FBgn0038013) Sgsf (FBgn0266261) CG10013 (FBgn0038012) CG4066 (FBgn0038011) Sfp87B (FBgn0259975) CG17738 (FBgn0038009) CG44038 (FBgn0264830) svp (FBgn0003651) CG44037 (FBgn0264829) CG3942 (FBgn0038008) Cyp313a3 (FBgn0038007) Cyp313a2 (FBgn0038006) Cyp313a5 (FBgn0038005) Pglym87 (FBgn0011270) #22 CG3916 (FBgn0038003) CG12256 (FBgn0038002) CG17404 (FBgn0038001) Rsbp15 (FBgn0038000) CG4860 (FBgn0037999) CG14742 (FBgn0037997) Cog1 (FBgn0037998) CG4830 (FBgn0037996) Adk1 (FBgn0037995) CG43450 (FBgn0263404) eIF3d2 (FBgn0037994) Cpn (FBgn0261714) dpr15 (FBgn0037993) CG4702 (FBgn0037992) dpr17 (FBgn0051361) Bilateria ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Chordata ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Vertebrata ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Gnathostomata ANCESTRAL SPECIES 620 ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000154709.a.b.b ENSGT00940000156735 ENSGT00940000160123 Euteleostomi ANCESTRAL SPECIES 17 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00390000006865 ENSGT00940000160161 ENSGT00940000164299 ENSGT00940000158576 ENSGT00940000161860 ENSGT00390000007725.A.a ENSGT00940000155840.C ENSGT00940000155810 ENSGT00940000155083.b ENSGT00940000156000 ENSGT01030000234588.b.b.a ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000154709.a.b.b ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00440000033863 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728 ENSGT00510000048519 Sarcopterygii ANCESTRAL SPECIES 12 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00390000006865 ENSGT00940000160161 ENSGT00940000164299 ENSGT00940000158576 ENSGT00940000161860 ENSGT00390000007725.A.a ENSGT00940000155840.C ENSGT00940000155810 ENSGT00940000155083.a ENSGT00940000156000 ENSGT01030000234588.b.b.a ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728 ENSGT00510000048519 ENSGT01080000257336.b.e.b.a.b.b ENSGT01030000234874 Tetrapoda ANCESTRAL SPECIES 22 ENSGT00940000157821 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00390000006865 ENSGT00940000160161 ENSGT00940000164299 ENSGT00940000158576 ENSGT00940000161860 ENSGT00390000007725.A.a ENSGT00940000155840.C ENSGT00940000155810 ENSGT00940000155083.a ENSGT00940000156000 ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728 ENSGT00510000048519 ENSGT01030000234874 ENSGT00940000156628 Amniota ANCESTRAL SPECIES 49 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b ENSGT00940000155728 ENSGT00510000048519 Sauria ANCESTRAL SPECIES 4 ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.a ENSGT00940000153677.a.a ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j Archelosauria ANCESTRAL SPECIES 3 ENSGT00940000159018 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.n ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000153272.a.b.m.b ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 Archosauria ANCESTRAL SPECIES 4 ENSGT00940000159018 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.n ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000153272.a.b.m.b ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j Aves ANCESTRAL SPECIES 1 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.n.a.a ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j Neognathae ANCESTRAL SPECIES 3 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b ENSGT00940000153272.a.b.n.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j Galloanserae ANCESTRAL SPECIES 3 ENSGT00940000159018 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.n.a.a.a ENSGT00940000153272.a.b.n.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j ENSGT00940000155728 Anatidae ANCESTRAL SPECIES 8 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b.b ENSGT00940000159668.a.b.a ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.n.a.a.a ENSGT00940000153272.a.b.n.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j ENSGT00940000155728 Duck MODERN SPECIES CACNA1C (ENSAPLG00000004725) IL17RA (ENSAPLG00000012503) HDHD5 (ENSAPLG00000012533) ADA2 (ENSAPLG00000012586) CECR2 (ENSAPLG00000012627) ENSAPLG00000012718 BCL2L13 (ENSAPLG00000008978) ENSAPLG00000008971 MICAL3 (ENSAPLG00000007993) PEX26 (ENSAPLG00000024303) ENSAPLG00000029176 ENSAPLG00000007864 USP18 (ENSAPLG00000007508) ENSAPLG00000006235 ENSAPLG00000028255 BPGM (ENSAPLG00000006230) ##22 CALD1 (ENSAPLG00000015139) ENSAPLG00000013751 ENSAPLG00000020980 RERG (ENSAPLG00000013727) ENSAPLG00000012929 EPS8 (ENSAPLG00000012030) STRAP (ENSAPLG00000011004) SLC15A5 (ENSAPLG00000010794) MGST1 (ENSAPLG00000010726) LMO3 (ENSAPLG00000010662) RERGL (ENSAPLG00000010631) PIK3C2G (ENSAPLG00000009943) PLCZ1 (ENSAPLG00000009837) CAPZA3 (ENSAPLG00000009710) PLEKHA5 (ENSAPLG00000008987) Pink-footed goose MODERN SPECIES 24 IL17RA (ENSABRG00000014337) TMEM121B (ENSABRG00000014332) HDHD5 (ENSABRG00000014328) ADA2 (ENSABRG00000014315) CECR2 (ENSABRG00000014273) ENSABRG00000014254 BCL2L13 (ENSABRG00000014242) ENSABRG00000014236 MICAL3 (ENSABRG00000014172) PEX26 (ENSABRG00000014163) ENSABRG00000014161 ENSABRG00000014150 USP18 (ENSABRG00000014136) ENSABRG00000014128 ENSABRG00000014074 BPGM (ENSABRG00000014038) ##22 CALD1 (ENSABRG00000014026) ENSABRG00000014011 RERG (ENSABRG00000013995) PTPRO (ENSABRG00000013964) EPS8 (ENSABRG00000013939) STRAP (ENSABRG00000013930) DERA (ENSABRG00000013924) SLC15A5 (ENSABRG00000013915) MGST1 (ENSABRG00000013904) LMO3 (ENSABRG00000013901) RERGL (ENSABRG00000013876) Phasianidae ANCESTRAL SPECIES ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.a.b.a ENSGT00940000153272.a.b.n.a.a.b.b ENSGT00940000153272.a.b.n.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j ENSGT00940000155728 Phasianidae_b ANCESTRAL SPECIES ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A.a ENSGT00940000153272.a.b.n.a.a.b.a ENSGT00940000153272.a.b.n.a.a.b.b ENSGT00940000153272.a.b.n.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j ENSGT00940000155728 Chicken MODERN SPECIES CECR1 (ENSGALG00010011860) CECR2 (ENSGALG00010011637) ATP6V1E1 (ENSGALG00010012315) BCL2L13 (ENSGALG00010012343) BID (ENSGALG00010012415) MICAL3 (ENSGALG00010012509) PEX26 (ENSGALG00010012588) TUBA8B (ENSGALG00010012593) TUBA8A (ENSGALG00010012601) USP18 (ENSGALG00010012633) ENSGALG00010013395 ENSGALG00010013401 AKR1B1 (ENSGALG00010013417) ENSGALG00010013442 AKR1E2 (ENSGALG00010015207) BPGM (ENSGALG00010013428) ##22 CALD1 (ENSGALG00010013465) AKR1B10 (ENSGALG00010013501) RERG (ENSGALG00010011589) PTPRO (ENSGALG00010012702) EPS8 (ENSGALG00010012768) STRAP (ENSGALG00010012908) DERA (ENSGALG00010012957) SLC15A5 (ENSGALG00010013023) MGST1 (ENSGALG00010012732) LMO3 (ENSGALG00010013537) RERGL (ENSGALG00010013562) PIK3C2G (ENSGALG00010013617) PLCZ1 (ENSGALG00010013636) CAPZA3 (ENSGALG00010014904) PLEKHA5 (ENSGALG00010013753) Turkey MODERN SPECIES ENSMGAG00000013577 ENSMGAG00000018611 ENSMGAG00000013575 ENSMGAG00000018643 ENSMGAG00000013573 ENSMGAG00000013570 ENSMGAG00000021624 ENSMGAG00000013561 ENSMGAG00000013559 ENSMGAG00000019599 ENSMGAG00000013554 ENSMGAG00000013543 ENSMGAG00000013542 ENSMGAG00000013530 ENSMGAG00000013526 BPGM (ENSMGAG00000013525) ##22 ENSMGAG00000019798 ENSMGAG00000013513 ENSMGAG00000013511 ENSMGAG00000013508 ENSMGAG00000016608 ENSMGAG00000022201 ENSMGAG00000020849 ENSMGAG00000013503 ENSMGAG00000013479 ENSMGAG00000013482 ENSMGAG00000021826 ENSMGAG00000013477 ENSMGAG00000013469 ENSMGAG00000013462 ENSMGAG00000013460 Japanese quail MODERN SPECIES HDHD5 (ENSCJPG00005018766) ADA2 (ENSCJPG00005018765) CECR2 (ENSCJPG00005018763) ENSCJPG00005018762 BCL2L13 (ENSCJPG00005018757) ENSCJPG00005018755 MICAL3 (ENSCJPG00005018380) PEX26 (ENSCJPG00005018364) ENSCJPG00005018363 ENSCJPG00005018362 USP18 (ENSCJPG00005018361) ENSCJPG00005018360 ENSCJPG00005018358 ENSCJPG00005018356 ENSCJPG00005018354 BPGM (ENSCJPG00005018353) ##22 CALD1 (ENSCJPG00005018310) ENSCJPG00005018309 RERG (ENSCJPG00005018308) ENSCJPG00005018307 TDG (ENSCJPG00005018306) GLT8D2 (ENSCJPG00005018305) HCFC2 (ENSCJPG00005018304) NFYB (ENSCJPG00005018303) TXNRD1 (ENSCJPG00005018301) HSP90B1 (ENSCJPG00005018299) CHST11 (ENSCJPG00005018298) SLC41A2 (ENSCJPG00005018297) ENSCJPG00005018296 ALDH1L2 (ENSCJPG00005018295) WASHC4 (ENSCJPG00005018294) Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b ENSGT00940000153272.a.b.n.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j Neognathae_c ANCESTRAL SPECIES ENSGT00940000159018 ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b ENSGT00940000153272.a.b.n.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j ENSGT00940000155728 Kakapo MODERN SPECIES 20 CACNA1C (ENSSHBG00005006642) IL17RA (ENSSHBG00005003994) HDHD5 (ENSSHBG00005003963) ADA2 (ENSSHBG00005003945) CECR2 (ENSSHBG00005003919) ENSSHBG00005003895 BCL2L13 (ENSSHBG00005003885) ENSSHBG00005003873 MICAL3 (ENSSHBG00005003714) PEX26 (ENSSHBG00005003650) ENSSHBG00005003639 ENSSHBG00005003625 USP18 (ENSSHBG00005003614) ENSSHBG00005003450 AKR1B1 (ENSSHBG00005003359) BPGM (ENSSHBG00005003334) ##22 CALD1 (ENSSHBG00005003302) ENSSHBG00005003277 RERG (ENSSHBG00005003262) ENSSHBG00005003195 ENSSHBG00005003163 EPS8 (ENSSHBG00005003131) STRAP (ENSSHBG00005003116) DERA (ENSSHBG00005003100) SLC15A5 (ENSSHBG00005003065) MGST1 (ENSSHBG00005003052) LMO3 (ENSSHBG00005003037) RERGL (ENSSHBG00005003013) ENSSHBG00005002986 ENSSHBG00005002960 PLCZ1 (ENSSHBG00005002916) Golden eagle MODERN SPECIES 8 ADA2 (ENSACCG00020005267) CECR2 (ENSACCG00020005367) ENSACCG00020005508 BCL2L13 (ENSACCG00020005524) ENSACCG00020005539 MICAL3 (ENSACCG00020005658) PEX26 (ENSACCG00020005713) ENSACCG00020005720 ENSACCG00020005754 USP18 (ENSACCG00020005779) ENSACCG00020005800 ENSACCG00020005813 ENSACCG00020005852 ENSACCG00020005882 ENSACCG00020005901 BPGM (ENSACCG00020005923) ##22 CALD1 (ENSACCG00020005965) ENSACCG00020006002 RERG (ENSACCG00020006013) PTPRO (ENSACCG00020006151) EPS8 (ENSACCG00020006280) STRAP (ENSACCG00020006311) DERA (ENSACCG00020006331) SLC15A5 (ENSACCG00020006348) MGST1 (ENSACCG00020006361) LMO3 (ENSACCG00020006383) RERGL (ENSACCG00020006397) PIK3C2G (ENSACCG00020006410) PLCZ1 (ENSACCG00020006441) CAPZA3 (ENSACCG00020006458) PLEKHA5 (ENSACCG00020006477) Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b.c.a ENSGT00940000153272.a.b.n.a.a.a ENSGT00940000153272.a.b.n.a.b.c.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728 Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b.c.a ENSGT00940000153272.a.b.n.a.a.a ENSGT00940000153272.a.b.n.a.b.c.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000159950 ENSGT00940000155728 ENSGT00510000048519 ENSGT00940000156628 ENSGT01080000257336.b.e.b.a.a Flycatcher MODERN SPECIES 10 DERA (ENSFALG00000009681) STRAP (ENSFALG00000009695) EPS8 (ENSFALG00000009712) ENSFALG00000028935 ENSFALG00000010984 ENSFALG00000009645 BCL2L13 (ENSFALG00000009635) ENSFALG00000009632 MICAL3 (ENSFALG00000009619) PEX26 (ENSFALG00000009611) TUBA8 (ENSFALG00000009609) USP18 (ENSFALG00000009602) ENSFALG00000028102 ENSFALG00000009583 ENSFALG00000009578 BPGM (ENSFALG00000025942) ##22 CALD1 (ENSFALG00000009564) ENSFALG00000009551 CECR2 (ENSFALG00000002934) ADA2 (ENSFALG00000002960) ENSFALG00000025570 HDHD5 (ENSFALG00000002989) IL17RA (ENSFALG00000003003) ENSFALG00000026230 CACNA1C (ENSFALG00000003063) DCP1B (ENSFALG00000003240) LRTM2 (ENSFALG00000025404) CACNA2D4 (ENSFALG00000003268) ADIPOR2 (ENSFALG00000029013) WNT5B (ENSFALG00000003993) FBXL14 (ENSFALG00000014717) Passeriformes_g ANCESTRAL SPECIES 34 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.b.c.a ENSGT00940000153272.a.b.n.a.a.a ENSGT00940000153272.a.b.n.a.b.c.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728 Medium ground finch MODERN SPECIES 87 IL17RA (ENSGFOG00000014705) HDHD5 (ENSGFOG00000014708) ADA2 (ENSGFOG00000000380) CECR2 (ENSGFOG00000000398) ENSGFOG00000000416 BCL2L13 (ENSGFOG00000000424) ENSGFOG00000000430 MICAL3 (ENSGFOG00000000461) PEX26 (ENSGFOG00000000553) TUBA8 (ENSGFOG00000000581) USP18 (ENSGFOG00000000597) ENSGFOG00000000609 ENSGFOG00000000635 ENSGFOG00000000683 ENSGFOG00000000689 BPGM (ENSGFOG00000000704) ##22 CALD1 (ENSGFOG00000000713) ENSGFOG00000000738 RERG (ENSGFOG00000000752) PTPRO (ENSGFOG00000000788) EPS8 (ENSGFOG00000000934) STRAP (ENSGFOG00000001185) DERA (ENSGFOG00000001192) SLC15A5 (ENSGFOG00000001201) MGST1 (ENSGFOG00000001215) LMO3 (ENSGFOG00000001220) RERGL (ENSGFOG00000001229) PIK3C2G (ENSGFOG00000001244) PLCZ1 (ENSGFOG00000001337) PLEKHA5 (ENSGFOG00000001352) AEBP2 (ENSGFOG00000001370) Passeroidea ANCESTRAL SPECIES 36 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000165639.A ENSGT00940000153272.a.b.n.a.a.a ENSGT00940000153272.a.b.n.a.b.c.a ENSGT00940000153272.a.b.n.a.b.c.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 ENSGT00940000155728 Zebra finch MODERN SPECIES 11 ENSTGUG00000023406 CACNA1C (ENSTGUG00000012538) IL17RA (ENSTGUG00000012526) TMEM121B (ENSTGUG00000023548) HDHD5 (ENSTGUG00000021784) ADA2 (ENSTGUG00000012520) CECR2 (ENSTGUG00000012517) ATP6V1E1 (ENSTGUG00000020869) BCL2L13 (ENSTGUG00000020949) ENSTGUG00000025645 MICAL3 (ENSTGUG00000020852) TUBA8 (ENSTGUG00000025418) USP18 (ENSTGUG00000012493) ENSTGUG00000012489 AKR1B1 (ENSTGUG00000023209) BPGM (ENSTGUG00000020016) ##22 CALD1 (ENSTGUG00000012449) ENSTGUG00000012430 RERG (ENSTGUG00000021990) ENSTGUG00000012409 EPS8 (ENSTGUG00000012399) STRAP (ENSTGUG00000012395) DERA (ENSTGUG00000012393) SLC15A5 (ENSTGUG00000012392) MGST1 (ENSTGUG00000012391) LMO3 (ENSTGUG00000028691) RERGL (ENSTGUG00000019530) PIK3C2G (ENSTGUG00000012374) PLCZ1 (ENSTGUG00000012361) PLEKHA5 (ENSTGUG00000012354) AEBP2 (ENSTGUG00000012348) Common canary MODERN SPECIES 30 CACNA1C (ENSSCAG00000005286) IL17RA (ENSSCAG00000005794) HDHD5 (ENSSCAG00000005805) ADA2 (ENSSCAG00000005815) ENSSCAG00000005825 BCL2L13 (ENSSCAG00000005833) ENSSCAG00000005838 MICAL3 (ENSSCAG00000005891) PEX26 (ENSSCAG00000005964) TUBA8 (ENSSCAG00000005973) USP18 (ENSSCAG00000005984) ENSSCAG00000005999 ENSSCAG00000006048 ENSSCAG00000006061 ENSSCAG00000006069 BPGM (ENSSCAG00000006077) ##22 ENSSCAG00000006082 CALD1 (ENSSCAG00000006115) ENSSCAG00000006231 RERG (ENSSCAG00000006234) PTPRO (ENSSCAG00000006267) EPS8 (ENSSCAG00000006414) STRAP (ENSSCAG00000006432) DERA (ENSSCAG00000006433) ENSSCAG00000006438 SLC15A5 (ENSSCAG00000006449) MGST1 (ENSSCAG00000006457) LMO3 (ENSSCAG00000006464) RERGL (ENSSCAG00000006469) ENSSCAG00000006476 PIK3C2G (ENSSCAG00000006524) Great tit MODERN SPECIES 10 IL17RA (ENSPMJG00000011142) HOXA1 (ENSPMJG00000011141) HDHD5 (ENSPMJG00000011140) ADA2 (ENSPMJG00000011136) CECR2 (ENSPMJG00000011133) ENSPMJG00000011126 BCL2L13 (ENSPMJG00000011124) ENSPMJG00000011122 MICAL3 (ENSPMJG00000011105) PEX26 (ENSPMJG00000011096) TUBA8 (ENSPMJG00000011095) USP18 (ENSPMJG00000011094) ENSPMJG00000011093 ENSPMJG00000011092 ENSPMJG00000011083 BPGM (ENSPMJG00000011078) ##22 CALD1 (ENSPMJG00000011043) ENSPMJG00000011041 RERG (ENSPMJG00000011025) PTPRO (ENSPMJG00000011013) EPS8 (ENSPMJG00000010982) STRAP (ENSPMJG00000010972) DERA (ENSPMJG00000010722) SLC15A5 (ENSPMJG00000010721) MGST1 (ENSPMJG00000010717) LMO3 (ENSPMJG00000010716) RERGL (ENSPMJG00000010693) ENSPMJG00000010663 ENSPMJG00000010662 PIK3C2G (ENSPMJG00000010661) PLEKHA5 (ENSPMJG00000010603) African ostrich MODERN SPECIES 771 ADA2 (ENSSCUG00000015821) CECR2 (ENSSCUG00000015818) ENSSCUG00000015815 BCL2L13 (ENSSCUG00000015813) ENSSCUG00000015807 MICAL3 (ENSSCUG00000015788) PEX26 (ENSSCUG00000015782) ENSSCUG00000015780 ENSSCUG00000015777 USP18 (ENSSCUG00000015775) ENSSCUG00000015773 ENSSCUG00000015769 ENSSCUG00000015767 ENSSCUG00000015766 ENSSCUG00000015762 BPGM (ENSSCUG00000015757) ##22 CALD1 (ENSSCUG00000015752) ENSSCUG00000015750 RERG (ENSSCUG00000015747) ENSSCUG00000015730 Australian saltwater crocodile MODERN SPECIES 49 HDHD5 (ENSCPRG00005013366) ADA2 (ENSCPRG00005013346) CECR2 (ENSCPRG00005013308) SLC25A18 (ENSCPRG00005013298) ENSCPRG00005013295 BCL2L13 (ENSCPRG00005013284) ENSCPRG00005013283 MICAL3 (ENSCPRG00005013261) PEX26 (ENSCPRG00005013248) ENSCPRG00005013247 ENSCPRG00005013233 USP18 (ENSCPRG00005013223) ENSCPRG00005013054 ENSCPRG00005013006 ENSCPRG00005012994 BPGM (ENSCPRG00005012990) ##22 CALD1 (ENSCPRG00005012891) ENSCPRG00005012852 ENSCPRG00005012820 ENSCPRG00005012808 RERG (ENSCPRG00005012803) PTPRO (ENSCPRG00005012750) EPS8 (ENSCPRG00005012708) STRAP (ENSCPRG00005012683) DERA (ENSCPRG00005012680) SLC15A5 (ENSCPRG00005012625) MGST1 (ENSCPRG00005012616) LMO3 (ENSCPRG00005012590) RERGL (ENSCPRG00005012546) PIK3C2G (ENSCPRG00005012461) ENSCPRG00005012442 Cryptodira ANCESTRAL SPECIES 10 ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.b ENSGT00940000161720 ENSGT00940000153677.a.b.b ENSGT00940000153677.a.a.a ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b.m.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000153272.a.b.m.b ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.b ENSGT00940000161720 ENSGT00940000153677.a.b.b.a ENSGT00940000153677.a.a.a ENSGT00940000153677.a.b.a ENSGT00940000153677.a.a.b ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b.m.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000153272.a.b.m.b ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 ENSGT00940000159950 Testudinidae ANCESTRAL SPECIES 14 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.b ENSGT00940000161720 ENSGT00940000153677.a.b.b.a ENSGT00940000153677.a.b.a ENSGT00940000153677.a.a.b ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b.m.a ENSGT00940000153677.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000153272.a.b.m.b ENSGT00950000182920.b.a.a.c.a.a.a.c.a.b ENSGT00950000182920.b.a.a.c.a.a.a.c.a.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00960000188800 ENSGT00940000159982 Abingdon island giant tortoise MODERN SPECIES 2048 ENSCABG00000020970 BPGM (ENSCABG00000020977) ##22 CALD1 (ENSCABG00000020983) AKR1B1 (ENSCABG00000020987) ENSCABG00000021008 ENSCABG00000021013 Goode s thornscrub tortoise MODERN SPECIES ENSGEVG00005013511 MICAL3 (ENSGEVG00005013353) PEX26 (ENSGEVG00005013284) ENSGEVG00005013206 ENSGEVG00005013152 USP18 (ENSGEVG00005012870) ENSGEVG00005012217 ENSGEVG00005012015 ENSGEVG00005011722 ENSGEVG00005011637 ENSGEVG00005011431 ENSGEVG00005011201 ENSGEVG00005011110 ENSGEVG00005010862 ENSGEVG00005010759 BPGM (ENSGEVG00005010743) ##22 CALD1 (ENSGEVG00005010569) ENSGEVG00005009985 ENSGEVG00005009756 ENSGEVG00005009668 RERG (ENSGEVG00005009581) ENSGEVG00005009536 PTPRO (ENSGEVG00005009291) EPS8 (ENSGEVG00005009037) STRAP (ENSGEVG00005008994) DERA (ENSGEVG00005008965) SLC15A5 (ENSGEVG00005008889) MGST1 (ENSGEVG00005008853) LMO3 (ENSGEVG00005008799) RERGL (ENSGEVG00005007288) PIK3C2G (ENSGEVG00005007062) Emydidae ANCESTRAL SPECIES 5 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.b ENSGT00940000161720 ENSGT00940000153677.a.b.b.a ENSGT00940000153677.a.a.a ENSGT00940000153677.a.b.a ENSGT00940000153677.a.a.b ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b.m.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000153272.a.b.m.b ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j painted turtle MODERN SPECIES 2413 SLC25A18 (ENSCPBG00000028219) ENSCPBG00000028220 BCL2L13 (ENSCPBG00000028221) ENSCPBG00000028222 MICAL3 (ENSCPBG00000028223) PEX26 (ENSCPBG00000028225) ENSCPBG00000028226 ENSCPBG00000028227 USP18 (ENSCPBG00000028228) ENSCPBG00000028229 ENSCPBG00000028230 ENSCPBG00000028231 ENSCPBG00000028232 ENSCPBG00000028233 ENSCPBG00000028234 BPGM (ENSCPBG00000028235) ##22 CALD1 (ENSCPBG00000028239) ENSCPBG00000028240 ENSCPBG00000028241 ENSCPBG00000028242 ENSCPBG00000028243 RERG (ENSCPBG00000028244) PTPRO (ENSCPBG00000028245) EPS8 (ENSCPBG00000028247) STRAP (ENSCPBG00000028248) DERA (ENSCPBG00000028249) SLC15A5 (ENSCPBG00000028251) MGST1 (ENSCPBG00000028252) LMO3 (ENSCPBG00000028254) Three-toed box turtle MODERN SPECIES 49 ENSTMTG00000002711 ENSTMTG00000002724 ENSTMTG00000002730 ENSTMTG00000002753 ENSTMTG00000002815 BPGM (ENSTMTG00000002830) ##22 CALD1 (ENSTMTG00000002837) ENSTMTG00000002847 RERG (ENSTMTG00000002855) PTPRO (ENSTMTG00000002868) EPS8 (ENSTMTG00000002887) STRAP (ENSTMTG00000002900) DERA (ENSTMTG00000002907) SLC15A5 (ENSTMTG00000002914) MGST1 (ENSTMTG00000002924) LMO3 (ENSTMTG00000002932) RERGL (ENSTMTG00000002940) PIK3C2G (ENSTMTG00000002955) PLCZ1 (ENSTMTG00000003027) ENSTMTG00000003192 PLEKHA5 (ENSTMTG00000003226) Chinese turtle MODERN SPECIES 2045 CECR2 (ENSPSIG00000012089) SLC25A18 (ENSPSIG00000012273) ENSPSIG00000012788 BCL2L13 (ENSPSIG00000013253) ENSPSIG00000013387 MICAL3 (ENSPSIG00000013478) PEX26 (ENSPSIG00000014908) TUBA8 (ENSPSIG00000014913) USP18 (ENSPSIG00000015004) ENSPSIG00000015159 ENSPSIG00000015380 ENSPSIG00000016453 ENSPSIG00000016692 ENSPSIG00000005307 ENSPSIG00000005636 BPGM (ENSPSIG00000007593) ##22 CALD1 (ENSPSIG00000007608) ENSPSIG00000007875 ENSPSIG00000007882 Lepidosauria ANCESTRAL SPECIES 3 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153677.a.a.d ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159982 ENSGT00940000159950 ENSGT00950000183119.b.j Episquamata ANCESTRAL SPECIES 3 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153677.a.a.d ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159950.b ENSGT00950000183119.b.j ENSGT00940000159950.a Laterata ANCESTRAL SPECIES 6 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153677.a.a.d ENSGT00940000165639.A ENSGT00950000182920.b.a.a.c.a.a.a.c.b ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159950.b ENSGT00950000183119.b.j ENSGT00940000159950.a ENSGT00940000155728 Common wall lizard MODERN SPECIES 1 SLC25A18 (ENSPMRG00000022936) ENSPMRG00000022957 BCL2L13 (ENSPMRG00000022962) ENSPMRG00000022967 MICAL3 (ENSPMRG00000023115) PEX26 (ENSPMRG00000023396) TUBA8 (ENSPMRG00000023398) USP18 (ENSPMRG00000023400) ENSPMRG00000023407 ENSPMRG00000023448 ENSPMRG00000023463 ENSPMRG00000023466 ENSPMRG00000023470 ENSPMRG00000023471 AKR1B1 (ENSPMRG00000023476) BPGM (ENSPMRG00000023482) ##22 ENSPMRG00000023484 ENSPMRG00000023488 ENSPMRG00000023498 ENSPMRG00000023503 RERG (ENSPMRG00000023507) PTPRO (ENSPMRG00000023512) EPS8 (ENSPMRG00000023522) STRAP (ENSPMRG00000023525) DERA (ENSPMRG00000023531) SLC15A5 (ENSPMRG00000023536) MGST1 (ENSPMRG00000023537) ENSPMRG00000023539 LMO3 (ENSPMRG00000023541) RERGL (ENSPMRG00000023545) ENSPMRG00000023551 Argentine black and white tegu MODERN SPECIES 6 ADA2 (ENSSMRG00000002111) CECR2 (ENSSMRG00000002151) SLC25A18 (ENSSMRG00000002173) ENSSMRG00000002179 BCL2L13 (ENSSMRG00000002191) ENSSMRG00000002195 MICAL3 (ENSSMRG00000002219) PEX26 (ENSSMRG00000002317) ENSSMRG00000002325 ENSSMRG00000002328 USP18 (ENSSMRG00000002330) ENSSMRG00000002337 ENSSMRG00000002605 ENSSMRG00000005255 AKR1B1 (ENSSMRG00000005340) BPGM (ENSSMRG00000005375) ##22 CALD1 (ENSSMRG00000005417) ENSSMRG00000005451 ENSSMRG00000005453 RERG (ENSSMRG00000005487) PTPRO (ENSSMRG00000005525) EPS8 (ENSSMRG00000005570) STRAP (ENSSMRG00000005604) DERA (ENSSMRG00000005615) SLC15A5 (ENSSMRG00000005623) MGST1 (ENSSMRG00000005689) LMO3 (ENSSMRG00000005708) RERGL (ENSSMRG00000005774) ENSSMRG00000005837 ENSSMRG00000005847 ENSSMRG00000005877 Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000159018 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000165639.B ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159950.b ENSGT00950000183119.b.j ENSGT00940000159950.a Elapidae ANCESTRAL SPECIES 6 ENSGT00940000159018 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b.c ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.j ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b.k ENSGT00940000154814.b.j ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159950.b ENSGT00950000183119.b.j ENSGT00940000159950.a Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000159018 ENSGT00940000154822.a ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b.c ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.j ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b.j ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159950.b ENSGT00950000183119.b.j ENSGT00940000159950.a ENSGT00940000155728 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000156127 ENSGT00940000159018 ENSGT00390000018051 ENSGT00950000183113.b.b ENSGT00940000160360 ENSGT00940000162050 ENSGT00390000002730 ENSGT00390000015552 ENSGT00940000166408 ENSGT00940000155580.b.b.c ENSGT00510000049725 ENSGT00940000159668.a.b ENSGT00940000159668.a.a ENSGT00940000161720 ENSGT00940000153272.a.b.j ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00950000182920.b.a.a.c.a.a.a.c.a ENSGT00940000159750 ENSGT00940000154814.b.j ENSGT00940000156403.b ENSGT00940000155197 ENSGT00390000007878 ENSGT00940000158916 ENSGT00390000011980.a ENSGT00940000153908.a ENSGT00940000161146 ENSGT00940000159950.b ENSGT00950000183119.b.j ENSGT00940000159950.a ENSGT00940000155728 Mainland tiger snake MODERN SPECIES 106 ADA2 (ENSNSUG00000008367) CECR2 (ENSNSUG00000008313) ENSNSUG00000008312 ENSNSUG00000008311 ENSNSUG00000008310 ENSNSUG00000008309 ENSNSUG00000008308 ENSNSUG00000008307 ENSNSUG00000008306 ENSNSUG00000008305 PEX26 (ENSNSUG00000008304) ENSNSUG00000008302 ENSNSUG00000008298 USP18 (ENSNSUG00000008297) ENSNSUG00000008223 BPGM (ENSNSUG00000008222) ##22 CALD1 (ENSNSUG00000008219) ENSNSUG00000008218 ENSNSUG00000008217 RERG (ENSNSUG00000008216) ENSNSUG00000008215 PTPRO (ENSNSUG00000008214) EPS8 (ENSNSUG00000008213) STRAP (ENSNSUG00000008212) DERA (ENSNSUG00000008211) SLC15A5 (ENSNSUG00000008209) MGST1 (ENSNSUG00000008207) LMO3 (ENSNSUG00000008205) ENSNSUG00000008202 Eastern brown snake MODERN SPECIES CACNA1C (ENSPTXG00000002900) IL17RA (ENSPTXG00000002877) HDHD5 (ENSPTXG00000002876) ADA2 (ENSPTXG00000002875) CECR2 (ENSPTXG00000002718) SLC25A18 (ENSPTXG00000002712) ENSPTXG00000002711 BCL2L13 (ENSPTXG00000002709) ENSPTXG00000002707 MICAL3 (ENSPTXG00000002695) PEX26 (ENSPTXG00000002691) ENSPTXG00000002690 ENSPTXG00000002687 USP18 (ENSPTXG00000002676) AKR1B1 (ENSPTXG00000002672) BPGM (ENSPTXG00000002670) ##22 CALD1 (ENSPTXG00000002665) ENSPTXG00000002662 ENSPTXG00000002656 ENSPTXG00000002653 ENSPTXG00000002652 ENSPTXG00000002650 PTPRO (ENSPTXG00000002647) EPS8 (ENSPTXG00000002644) STRAP (ENSPTXG00000002641) DERA (ENSPTXG00000002637) SLC15A5 (ENSPTXG00000002634) MGST1 (ENSPTXG00000002631) LMO3 (ENSPTXG00000002630) RERGL (ENSPTXG00000002627) ENSPTXG00000002619 Blue-lipped sea krait MODERN SPECIES 5099 BPGM (ENSLLTG00000009381) ##22 Indian cobra MODERN SPECIES 6 HDHD5 (ENSNNAG00000017987) ADA2 (ENSNNAG00000017996) CECR2 (ENSNNAG00000018014) SLC25A18 (ENSNNAG00000018048) ENSNNAG00000018051 BCL2L13 (ENSNNAG00000018054) ENSNNAG00000018058 ENSNNAG00000018066 ENSNNAG00000018071 ENSNNAG00000018075 PEX26 (ENSNNAG00000018078) ENSNNAG00000018079 ENSNNAG00000018082 USP18 (ENSNNAG00000018085) AKR1B1 (ENSNNAG00000018101) BPGM (ENSNNAG00000018104) ##22 CALD1 (ENSNNAG00000018107) ENSNNAG00000018113 ENSNNAG00000018116 RERG (ENSNNAG00000018120) ENSNNAG00000018129 EPS8 (ENSNNAG00000018162) STRAP (ENSNNAG00000018217) DERA (ENSNNAG00000018228) SLC15A5 (ENSNNAG00000018237) MGST1 (ENSNNAG00000018240) LMO3 (ENSNNAG00000018244) RERGL (ENSNNAG00000018248) ENSNNAG00000018252 ENSNNAG00000003242 PLEKHA5 (ENSNNAG00000003375) Lizard MODERN SPECIES 4 CECR2 (ENSACAG00000012297) ENSACAG00000040197 SLC25A18 (ENSACAG00000012327) ENSACAG00000012403 BCL2L13 (ENSACAG00000012487) ENSACAG00000012534 MICAL3 (ENSACAG00000012542) ENSACAG00000040688 PEX26 (ENSACAG00000012449) ENSACAG00000012426 ENSACAG00000012411 USP18 (ENSACAG00000012304) ENSACAG00000012243 ENSACAG00000027925 ENSACAG00000012001 BPGM (ENSACAG00000034814) ##22 CALD1 (ENSACAG00000011851) ENSACAG00000011816 ENSACAG00000011779 ENSACAG00000035062 ENSACAG00000013633 ENSACAG00000013585 TRIM24 (ENSACAG00000013480) ENSACAG00000013357 ENSACAG00000043155 ENSACAG00000013165 ENSACAG00000012932 KDM7A (ENSACAG00000012823) SLC37A3 (ENSACAG00000012773) RAB19 (ENSACAG00000040946) ENSACAG00000043454 tuatara MODERN SPECIES 1153 ADA2 (ENSSPUG00000008771) CECR2 (ENSSPUG00000008749) SLC25A18 (ENSSPUG00000008713) ENSSPUG00000008691 BCL2L13 (ENSSPUG00000008666) ENSSPUG00000008650 MICAL3 (ENSSPUG00000008534) PEX26 (ENSSPUG00000008509) ENSSPUG00000008494 ENSSPUG00000008487 USP18 (ENSSPUG00000008363) ENSSPUG00000008294 ENSSPUG00000008275 ENSSPUG00000008266 AKR1B1 (ENSSPUG00000008235) BPGM (ENSSPUG00000008224) ##22 CALD1 (ENSSPUG00000008219) ENSSPUG00000008200 Mammalia ANCESTRAL SPECIES 36 ENSGT00940000161774 ENSGT00940000168513 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Theria ANCESTRAL SPECIES ENSGT00940000161666 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Eutheria ANCESTRAL SPECIES 1 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Atlantogenata ANCESTRAL SPECIES 60 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 Xenarthra ANCESTRAL SPECIES 330 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 Sloth MODERN SPECIES 6004 BPGM (ENSCHOG00000010302) ##22 Armadillo MODERN SPECIES 2832 ENSDNOG00000036961 AKR1B10 (ENSDNOG00000036011) BPGM (ENSDNOG00000004956) ##22 ENSDNOG00000044766 CALD1 (ENSDNOG00000038571) TMEM140 (ENSDNOG00000015106) CYREN (ENSDNOG00000015110) WDR91 (ENSDNOG00000015115) STRA8 (ENSDNOG00000003328) ENSDNOG00000033806 Afrotheria ANCESTRAL SPECIES 168 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 Afrotheria_a ANCESTRAL SPECIES 169 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 Elephant MODERN SPECIES 6 COPG2 (ENSLAFG00000020945) TSGA13 (ENSLAFG00000018030) ENSLAFG00000030262 MKLN1 (ENSLAFG00000001878) ENSLAFG00000017849 PLXNA4 (ENSLAFG00000020958) ENSLAFG00000026957 CHCHD3 (ENSLAFG00000003135) EXOC4 (ENSLAFG00000011374) LRGUK (ENSLAFG00000022345) SLC35B4 (ENSLAFG00000012932) AKR1B1 (ENSLAFG00000013107) ENSLAFG00000008410 BPGM (ENSLAFG00000008143) ##22 CALD1 (ENSLAFG00000027606) ENSLAFG00000031875 AGBL3 (ENSLAFG00000009753) TMEM140 (ENSLAFG00000022027) CYREN (ENSLAFG00000029509) WDR91 (ENSLAFG00000000670) Hyrax MODERN SPECIES 8353 BPGM (ENSPCAG00000007802) ##22 Tenrec MODERN SPECIES 6570 BPGM (ENSETEG00000017011) ##22 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 Laurasiatheria ANCESTRAL SPECIES 21 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Suina ANCESTRAL SPECIES 19 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Pig MODERN SPECIES 9 ENSSSCG00000056338 ENSSSCG00000054289 MKLN1 (ENSSSCG00000016549) ENSSSCG00000016548 PLXNA4 (ENSSSCG00000021562) ENSSSCG00000051030 CHCHD3 (ENSSSCG00000016545) ENSSSCG00000016543 ENSSSCG00000043692 ENSSSCG00000041425 LRGUK (ENSSSCG00000016542) SLC35B4 (ENSSSCG00000016541) ENSSSCG00000016540 AKR1B1 (ENSSSCG00000040608) ENSSSCG00000016538 BPGM (ENSSSCG00000039425) ##22 CALD1 (ENSSSCG00000016535) ENSSSCG00000056043 AGBL3 (ENSSSCG00000053763) TMEM140 (ENSSSCG00000040673) ENSSSCG00000048509 WDR91 (ENSSSCG00000016532) STRA8 (ENSSSCG00000016533) ENSSSCG00000027118 CNOT4 (ENSSSCG00000021354) NUP205 (ENSSSCG00000030386) STMP1 (ENSSSCG00000056374) SLC13A4 (ENSSSCG00000016527) FAM180A (ENSSSCG00000036403) ENSSSCG00000054267 MTPN (ENSSSCG00000039290) Chacoan peccary MODERN SPECIES 974 SLC35B4 (ENSCWAG00000012079) AKR1B1 (ENSCWAG00000012133) BPGM (ENSCWAG00000012170) ##22 CALD1 (ENSCWAG00000012220) ENSCWAG00000012436 TMEM140 (ENSCWAG00000012447) CYREN (ENSCWAG00000012457) WDR91 (ENSCWAG00000012511) STRA8 (ENSCWAG00000012647) ENSCWAG00000012727 ENSCWAG00000012812 Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Cetacea ANCESTRAL SPECIES 13 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602.s ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Odontoceti ANCESTRAL SPECIES 12 ENSGT00390000002222 ENSGT00510000047602.s ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT00940000169372 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Odontoceti_a DUPLICATION Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00390000002222 ENSGT00510000047602.s ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT00940000169372 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192.e ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00390000002222 ENSGT00510000047602.s ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT00940000169372 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a.a ##22 ENSGT00940000153901.a.a ENSGT00390000014089 ENSGT00390000013192.e ENSGT00390000001566 ENSGT00940000162637 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Monodontidae ANCESTRAL SPECIES 12 ENSGT00390000002222 ENSGT00510000047602.s.a ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT00940000169372 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a.a ##22 ENSGT00940000153901.a.a ENSGT00390000014089 ENSGT00390000013192.e ENSGT00390000001566 ENSGT00940000162637 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Beluga whale MODERN SPECIES 72 KLF14 (ENSDLEG00000009988) ENSDLEG00000009949 ENSDLEG00000009940 MKLN1 (ENSDLEG00000009797) PODXL (ENSDLEG00000009727) ENSDLEG00000009708 PLXNA4 (ENSDLEG00000009018) ENSDLEG00000008341 ENSDLEG00000008226 CHCHD3 (ENSDLEG00000008106) ENSDLEG00000008073 EXOC4 (ENSDLEG00000008038) LRGUK (ENSDLEG00000007997) SLC35B4 (ENSDLEG00000007984) AKR1B1 (ENSDLEG00000007968) BPGM (ENSDLEG00000007938) ##22 CALD1 (ENSDLEG00000021540) TMEM140 (ENSDLEG00000021533) CUNH7orf49 (ENSDLEG00000021531) WDR91 (ENSDLEG00000021524) ENSDLEG00000021518 STRA8 (ENSDLEG00000021513) ENSDLEG00000021509 CNOT4 (ENSDLEG00000021485) NUP205 (ENSDLEG00000021397) STMP1 (ENSDLEG00000021364) SLC13A4 (ENSDLEG00000021353) FAM180A (ENSDLEG00000021352) ENSDLEG00000021349 MTPN (ENSDLEG00000021348) CHRM2 (ENSDLEG00000021347) Narwhal MODERN SPECIES 306 TSGA13 (ENSMMNG00015007378) KLF14 (ENSMMNG00015007405) ENSMMNG00015007432 MKLN1 (ENSMMNG00015007465) ENSMMNG00015007513 ENSMMNG00015007542 ENSMMNG00015007558 CHCHD3 (ENSMMNG00015007587) ENSMMNG00015007604 EXOC4 (ENSMMNG00015007629) ENSMMNG00015007669 ENSMMNG00015007679 LRGUK (ENSMMNG00015007709) SLC35B4 (ENSMMNG00015007744) AKR1B1 (ENSMMNG00015007760) ENSMMNG00015007771 ##22 CALD1 (ENSMMNG00015007830) TMEM140 (ENSMMNG00015007998) ENSMMNG00015008011 WDR91 (ENSMMNG00015008044) STRA8 (ENSMMNG00015008094) ENSMMNG00015008113 CNOT4 (ENSMMNG00015008151) NUP205 (ENSMMNG00015008225) STMP1 (ENSMMNG00015008265) SLC13A4 (ENSMMNG00015008280) FAM180A (ENSMMNG00015008305) ENSMMNG00015008310 MTPN (ENSMMNG00015008320) CHRM2 (ENSMMNG00015008327) PTN (ENSMMNG00015008333) Vaquita MODERN SPECIES 20 ENSPSNG00000011939 COPG2 (ENSPSNG00000011753) TSGA13 (ENSPSNG00000011639) KLF14 (ENSPSNG00000011612) ENSPSNG00000011538 MKLN1 (ENSPSNG00000011439) ENSPSNG00000011385 ENSPSNG00000011361 PLXNA4 (ENSPSNG00000011011) ENSPSNG00000010906 CHCHD3 (ENSPSNG00000010811) EXOC4 (ENSPSNG00000010713) LRGUK (ENSPSNG00000010481) SLC35B4 (ENSPSNG00000010379) AKR1B1 (ENSPSNG00000010307) ENSPSNG00000010260 ##22 CALD1 (ENSPSNG00000009932) TMEM140 (ENSPSNG00000021365) CYREN (ENSPSNG00000021350) WDR91 (ENSPSNG00000021282) ENSPSNG00000021241 STRA8 (ENSPSNG00000021214) ENSPSNG00000021189 CNOT4 (ENSPSNG00000021094) NUP205 (ENSPSNG00000021013) STMP1 (ENSPSNG00000020966) SLC13A4 (ENSPSNG00000020899) FAM180A (ENSPSNG00000020870) ENSPSNG00000020839 MTPN (ENSPSNG00000020817) CHRM2 (ENSPSNG00000020802) Dolphin MODERN SPECIES 5329 BPGM (ENSTTRG00000000245) ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00950000182926.a.b ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B.ib ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00950000182926.a.b ##22 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Monodontidae ANCESTRAL SPECIES ENSGT01000000220951 ENSGT00990000213947 ENSGT00550000074897 ENSGT00950000183128.B.ib ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882 ENSGT00530000064485 ENSGT00940000166371 ENSGT00940000159131 ENSGT00940000161095 ENSGT00780000122095 ENSGT00390000004404 ENSGT00950000182926.a.b ##22 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00950000182928.B.d.b ENSGT00730000110872.b ENSGT00940000156968 ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B ENSGT00390000005897 ENSGT00940000164094 ENSGT01100000263497.E.b ENSGT00950000182964.a.a ENSGT00520000055591.a Narwhal MODERN SPECIES 304 ENSMMNG00015008528 ENSMMNG00015008536 ENSMMNG00015008547 MSH4 (ENSMMNG00015008573) ENSMMNG00015008600 ACADM (ENSMMNG00015008645) SLC44A5 (ENSMMNG00015008716) LHX8 (ENSMMNG00015008773) TYW3 (ENSMMNG00015008797) CRYZ (ENSMMNG00015008831) ENSMMNG00015008854 TNNI3K (ENSMMNG00015008876) LRRC53 (ENSMMNG00015008905) FPGT (ENSMMNG00015008924) ENSMMNG00015008934 ENSMMNG00015004124 ##22 NEGR1 (ENSMMNG00015004300) ZRANB2 (ENSMMNG00015004587) PTGER3 (ENSMMNG00015004807) ENSMMNG00015005022 ENSMMNG00015005137 CTH (ENSMMNG00015005464) ANKRD13C (ENSMMNG00015006243) SRSF11 (ENSMMNG00015006795) LRRC40 (ENSMMNG00015007303) LRRC7 (ENSMMNG00015008751) DEPDC1 (ENSMMNG00015010717) RPE65 (ENSMMNG00015011109) WLS (ENSMMNG00015011864) DIRAS3 (ENSMMNG00015012826) GNG12 (ENSMMNG00015012942) Beluga whale MODERN SPECIES 74 ENSDLEG00000021552 ENSDLEG00000021550 MSH4 (ENSDLEG00000021517) ENSDLEG00000021496 ACADM (ENSDLEG00000021490) SLC44A5 (ENSDLEG00000021483) LHX8 (ENSDLEG00000021479) TYW3 (ENSDLEG00000021476) CRYZ (ENSDLEG00000021475) ERICH3 (ENSDLEG00000021474) ENSDLEG00000021472 TNNI3K (ENSDLEG00000021469) FPGT (ENSDLEG00000021467) ENSDLEG00000021465 ENSDLEG00000021462 ENSDLEG00000021459 ##22 NEGR1 (ENSDLEG00000021457) ZRANB2 (ENSDLEG00000021455) PTGER3 (ENSDLEG00000021453) CTH (ENSDLEG00000021449) ANKRD13C (ENSDLEG00000021447) SRSF11 (ENSDLEG00000021445) ENSDLEG00000021443 LRRC40 (ENSDLEG00000021441) LRRC7 (ENSDLEG00000021431) DEPDC1 (ENSDLEG00000021426) RPE65 (ENSDLEG00000021421) WLS (ENSDLEG00000021417) DIRAS3 (ENSDLEG00000021415) GNG12 (ENSDLEG00000021413) GADD45A (ENSDLEG00000021410) Vaquita MODERN SPECIES ENSPSNG00000001926 ENSPSNG00000001917 ST6GALNAC3 (ENSPSNG00000001901) ASB17 (ENSPSNG00000001883) MSH4 (ENSPSNG00000001831) ENSPSNG00000001765 ACADM (ENSPSNG00000001696) SLC44A5 (ENSPSNG00000001574) LHX8 (ENSPSNG00000001488) TYW3 (ENSPSNG00000001452) CRYZ (ENSPSNG00000001395) ENSPSNG00000001349 TNNI3K (ENSPSNG00000001272) FPGT (ENSPSNG00000001225) LRRIQ3 (ENSPSNG00000001174) ENSPSNG00000001141 ##22 NEGR1 (ENSPSNG00000001115) ZRANB2 (ENSPSNG00000001069) PTGER3 (ENSPSNG00000001032) ENSPSNG00000001013 CTH (ENSPSNG00000000964) ANKRD13C (ENSPSNG00000000907) SRSF11 (ENSPSNG00000000868) LRRC40 (ENSPSNG00000000830) LRRC7 (ENSPSNG00000000776) DEPDC1 (ENSPSNG00000000663) RPE65 (ENSPSNG00000000590) WLS (ENSPSNG00000000517) DIRAS3 (ENSPSNG00000000480) GNG12 (ENSPSNG00000000467) GADD45A (ENSPSNG00000000436) Sperm whale MODERN SPECIES 16 MEST (ENSPCTG00005000511) COPG2 (ENSPCTG00005000445) TSGA13 (ENSPCTG00005000402) KLF14 (ENSPCTG00005000388) ENSPCTG00005000349 MKLN1 (ENSPCTG00005000329) ENSPCTG00005000303 ENSPCTG00005000289 ENSPCTG00005000281 ENSPCTG00005000266 CHCHD3 (ENSPCTG00005000248) EXOC4 (ENSPCTG00005004057) LRGUK (ENSPCTG00005004010) SLC35B4 (ENSPCTG00005003972) AKR1B1 (ENSPCTG00005003929) BPGM (ENSPCTG00005003916) ##22 CALD1 (ENSPCTG00005003851) STRA8 (ENSPCTG00005003817) ENSPCTG00005003805 CNOT4 (ENSPCTG00005003720) NUP205 (ENSPCTG00005003535) STMP1 (ENSPCTG00005003469) SLC13A4 (ENSPCTG00005003440) FAM180A (ENSPCTG00005003428) ENSPCTG00005003420 MTPN (ENSPCTG00005003405) ENSPCTG00005003395 CHRM2 (ENSPCTG00005003388) PTN (ENSPCTG00005003375) DGKI (ENSPCTG00005003006) CREB3L2 (ENSPCTG00005002895) Blue whale MODERN SPECIES 20 CPA5 (ENSBMSG00010020701) CPA1 (ENSBMSG00010020661) ENSBMSG00010020649 MEST (ENSBMSG00010020395) COPG2 (ENSBMSG00010020346) KLF14 (ENSBMSG00010020299) ENSBMSG00010020278 ENSBMSG00010020257 MKLN1 (ENSBMSG00010020209) PLXNA4 (ENSBMSG00010020018) CHCHD3 (ENSBMSG00010019973) EXOC4 (ENSBMSG00010019925) LRGUK (ENSBMSG00010019858) SLC35B4 (ENSBMSG00010019830) AKR1B1 (ENSBMSG00010019804) BPGM (ENSBMSG00010019793) ##22 CALD1 (ENSBMSG00010019698) ENSBMSG00010019584 TMEM140 (ENSBMSG00010019567) CYREN (ENSBMSG00010019533) WDR91 (ENSBMSG00010019424) STRA8 (ENSBMSG00010019366) ENSBMSG00010019336 CNOT4 (ENSBMSG00010019140) NUP205 (ENSBMSG00010019055) STMP1 (ENSBMSG00010019030) SLC13A4 (ENSBMSG00010018939) FAM180A (ENSBMSG00010018911) ENSBMSG00010018893 MTPN (ENSBMSG00010018866) CHRM2 (ENSBMSG00010018848) Pecora ANCESTRAL SPECIES 11 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.a ENSGT00940000153272.a.b.y ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Percora_a ANCESTRAL SPECIES 11 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.a ENSGT00940000153272.a.b.y ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT00940000158940 Bovidae ANCESTRAL SPECIES 12 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 ENSGT00940000158940 Caprinae ANCESTRAL SPECIES 10 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00940000165187 ENSGT00390000001702 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439.o ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.a.a ENSGT00940000153272.a.b.y ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 ENSGT00940000158940 Goat MODERN SPECIES 23 MKLN1 (ENSCHIG00000023032) ENSCHIG00000013016 ENSCHIG00000012838 ENSCHIG00000021946 CHCHD3 (ENSCHIG00000014420) ENSCHIG00000001384 ENSCHIG00000018200 ENSCHIG00000012890 ENSCHIG00000024010 LRGUK (ENSCHIG00000014837) ENSCHIG00000025857 ENSCHIG00000017125 SLC35B4 (ENSCHIG00000017132) AKR1B1 (ENSCHIG00000012061) ENSCHIG00000008971 BPGM (ENSCHIG00000015001) ##22 CALD1 (ENSCHIG00000021959) AGBL3 (ENSCHIG00000015475) TMEM140 (ENSCHIG00000025483) CYREN (ENSCHIG00000019318) WDR91 (ENSCHIG00000014156) STRA8 (ENSCHIG00000016064) ENSCHIG00000003203 ENSCHIG00000016591 CNOT4 (ENSCHIG00000010955) ENSCHIG00000011732 NUP205 (ENSCHIG00000005292) STMP1 (ENSCHIG00000013880) SLC13A4 (ENSCHIG00000026548) FAM180A (ENSCHIG00000021088) ENSCHIG00000014580 Rambouillet Sheep MODERN SPECIES 20 CPA5 (ENSOARG00020000544) CPA1 (ENSOARG00020000624) CEP41 (ENSOARG00020000683) MEST (ENSOARG00020000738) COPG2 (ENSOARG00020000807) TSGA13 (ENSOARG00020000839) KLF14 (ENSOARG00020000861) ENSOARG00020000890 ENSOARG00020000899 MKLN1 (ENSOARG00020000910) PLXNA4 (ENSOARG00020000951) CHCHD3 (ENSOARG00020000985) EXOC4 (ENSOARG00020001034) SLC35B4 (ENSOARG00020001136) AKR1B1 (ENSOARG00020001166) BPGM (ENSOARG00020001182) ##22 CALD1 (ENSOARG00020001213) AGBL3 (ENSOARG00020001295) TMEM140 (ENSOARG00020001349) WDR91 (ENSOARG00020001374) STRA8 (ENSOARG00020001429) ENSOARG00020001456 CNOT4 (ENSOARG00020001510) NUP205 (ENSOARG00020001705) STMP1 (ENSOARG00020001867) SLC13A4 (ENSOARG00020001884) FAM180A (ENSOARG00020001915) MTPN (ENSOARG00020001930) ENSOARG00020001950 CHRM2 (ENSOARG00020001961) PTN (ENSOARG00020001975) Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES ENSGT00950000182926.a.c ##22 Bos DUPLICATION Bos ANCESTRAL SPECIES ENSGT00950000182926.a.c.a ##22 Bos_a ANCESTRAL SPECIES ENSGT00950000182926.a.c.a ##22 Wild yak MODERN SPECIES 2936 ENSBMUG00000008142 ##22 Domestic yak MODERN SPECIES 6 METTL21EP (ENSBGRG00000003969) ENSBGRG00000003999 SLC10A2 (ENSBGRG00000004025) EFNB2 (ENSBGRG00000004087) ENSBGRG00000004145 ARGLU1 (ENSBGRG00000004158) ENSBGRG00000004177 NALF1 (ENSBGRG00000004214) ENSBGRG00000004246 ENSBGRG00000004266 LIG4 (ENSBGRG00000004289) ABHD13 (ENSBGRG00000004312) ENSBGRG00000004318 TNFSF13B (ENSBGRG00000004327) ENSBGRG00000004354 ENSBGRG00000004387 ##22 IRS2 (ENSBGRG00000004398) COL4A1 (ENSBGRG00000004437) COL4A2 (ENSBGRG00000005083) RAB20 (ENSBGRG00000008497) NAXD (ENSBGRG00000008539) CARS2 (ENSBGRG00000008654) ING1 (ENSBGRG00000008746) ANKRD10 (ENSBGRG00000008761) ARHGEF7 (ENSBGRG00000008825) TEX29 (ENSBGRG00000009509) SOX1 (ENSBGRG00000009555) ENSBGRG00000009615 ENSBGRG00000009648 TUBGCP3 (ENSBGRG00000009683) ATP11A (ENSBGRG00000010116) Bos ANCESTRAL SPECIES 13 ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848.f ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00950000182926.a.c.b ##22 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00940000156087 ENSGT00390000010770.o.a ENSGT00390000007015.q.a ENSGT00940000157229 ENSGT00960000192220 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00390000014814.a.b.a.a.b ENSGT00950000183195.b.a ENSGT00950000183192.a.a ENSGT00940000158191 Bos_b ANCESTRAL SPECIES 11 ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848.f ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00950000182926.a.c.b ##22 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00940000156087 ENSGT00390000010770.o.a ENSGT00390000007015.q.a ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00390000014814.a.b.a.a.b ENSGT00950000183195.b.a ENSGT00950000183192.a.a ENSGT00940000158191 ENSGT00940000161505 Hybrid Bos Indicus MODERN SPECIES 1 SYNE2 (ENSBIXG00005008874) ESR2 (ENSBIXG00005008657) ENSBIXG00005008612 MTHFD1 (ENSBIXG00005008575) AKAP5 (ENSBIXG00005008554) ZBTB25 (ENSBIXG00005008539) ZBTB1 (ENSBIXG00005008501) PLEKHG3 (ENSBIXG00005008432) SPTB (ENSBIXG00005008345) CHURC1 (ENSBIXG00005008309) GPX2 (ENSBIXG00005008290) RAB15 (ENSBIXG00005008271) FNTB (ENSBIXG00005008240) MAX (ENSBIXG00005008206) FUT8 (ENSBIXG00005008082) ENSBIXG00005008061 ##22 CCDC196 (ENSBIXG00005008041) GPHN (ENSBIXG00005007972) GARIN2 (ENSBIXG00005007852) PALS1 (ENSBIXG00005029302) ATP6V1D (ENSBIXG00005029338) ENSBIXG00005029373 PLEK2 (ENSBIXG00005029387) TMEM229B (ENSBIXG00005029409) ENSBIXG00005029420 ENSBIXG00005029421 PLEKHH1 (ENSBIXG00005029428) PIGH (ENSBIXG00005029441) ENSBIXG00005029456 ARG2 (ENSBIXG00005029460) VTI1B (ENSBIXG00005029483) Cow MODERN SPECIES 1 ESR2 (ENSBTAG00000004498) ENSBTAG00000013836 MTHFD1 (ENSBTAG00000009641) ZBTB25 (ENSBTAG00000009643) AKAP5 (ENSBTAG00000009642) ZBTB1 (ENSBTAG00000040551) HSPA2 (ENSBTAG00000007807) PPP1R36 (ENSBTAG00000007809) PLEKHG3 (ENSBTAG00000001551) SPTB (ENSBTAG00000004732) CHURC1 (ENSBTAG00000003469) RAB15 (ENSBTAG00000003474) FNTB (ENSBTAG00000005897) MAX (ENSBTAG00000017994) FUT8 (ENSBTAG00000019819) ENSBTAG00000037625 ##22 CCDC196 (ENSBTAG00000014234) GPHN (ENSBTAG00000004171) GARIN2 (ENSBTAG00000010239) PALS1 (ENSBTAG00000011767) ATP6V1D (ENSBTAG00000016309) EIF2S1 (ENSBTAG00000016311) PLEK2 (ENSBTAG00000016255) TMEM229B (ENSBTAG00000012900) PLEKHH1 (ENSBTAG00000018297) PIGH (ENSBTAG00000018299) ENSBTAG00000054736 ARG2 (ENSBTAG00000001945) VTI1B (ENSBTAG00000001948) RDH11 (ENSBTAG00000001950) RDH12 (ENSBTAG00000012838) Bos_a ANCESTRAL SPECIES 1 ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848.f ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00950000182926.a.c.b ##22 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00940000156087 ENSGT00390000010770.o.a ENSGT00390000007015.q.a ENSGT00940000157229 ENSGT00960000192220 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00390000014814.a.b.a.a.b ENSGT00950000183195.b.a ENSGT00950000183192.a.a ENSGT00940000158191 Domestic yak MODERN SPECIES 2 ZBTB25 (ENSBGRG00000013809) AKAP5 (ENSBGRG00000013884) ZBTB1 (ENSBGRG00000013899) HSPA2 (ENSBGRG00000013924) PPP1R36 (ENSBGRG00000013996) PLEKHG3 (ENSBGRG00000003632) SPTB (ENSBGRG00000003783) CHURC1 (ENSBGRG00000003865) GPX2 (ENSBGRG00000003971) RAB15 (ENSBGRG00000003995) FNTB (ENSBGRG00000004092) MAX (ENSBGRG00000004373) FUT8 (ENSBGRG00000004870) ENSBGRG00000004972 ENSBGRG00000004980 ENSBGRG00000004999 ##22 CCDC196 (ENSBGRG00000005017) GPHN (ENSBGRG00000005134) GARIN2 (ENSBGRG00000005346) PALS1 (ENSBGRG00000005372) ENSBGRG00000005441 ENSBGRG00000005627 PLEK2 (ENSBGRG00000005698) ENSBGRG00000005724 TMEM229B (ENSBGRG00000005747) PLEKHH1 (ENSBGRG00000005758) PIGH (ENSBGRG00000005849) ENSBGRG00000005885 ARG2 (ENSBGRG00000005898) VTI1B (ENSBGRG00000005918) RDH11 (ENSBGRG00000005960) Wild yak MODERN SPECIES 1286 ENSBMUG00000007706 ##22 CCDC196 (ENSBMUG00000007700) American bison MODERN SPECIES 3302 LUZP2 (ENSBBBG00000002893) CCDC179 (ENSBBBG00000013691) GAS2 (ENSBBBG00000013684) FANCF (ENSBBBG00000013676) SLC17A6 (ENSBBBG00000002858) ANO5 (ENSBBBG00000008114) NELL1 (ENSBBBG00000013621) ENSBBBG00000009050 ##22 SLC6A5 (ENSBBBG00000006841) PRMT3 (ENSBBBG00000013466) HTATIP2 (ENSBBBG00000013427) ENSBBBG00000013401 DBX1 (ENSBBBG00000013393) NAV2 (ENSBBBG00000001584) ENSBBBG00000001687 E2F8 (ENSBBBG00000013084) CSRP3 (ENSBBBG00000013070) ZDHHC13 (ENSBBBG00000013052) ENSBBBG00000013032 PTPN5 (ENSBBBG00000013029) TMEM86A (ENSBBBG00000002600) SPTY2D1 (ENSBBBG00000013009) ENSBBBG00000012981 Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 8 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000154773 ENSGT00950000182926.a.d.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00390000011359.b.a ENSGT00940000158940 Bos ANCESTRAL SPECIES 8 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT01100000263480.a.a.b.b.b.a.a.b.b.a.a.b ENSGT00730000111314 ENSGT00960000189944.a.a ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000153272.a.b.y ENSGT00950000182926.a.d.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a.f.b ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00390000011359.b.a ENSGT00940000158940 Bos_b ANCESTRAL SPECIES 7 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT01100000263480.a.a.b.b.b.a.a.b.b.a.a.b ENSGT00730000111314 ENSGT00960000189944.a.a ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000153272.a.b.y ENSGT00950000182926.a.d.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT01100000263511.b.a.b.a.b.a.b.b.a.b.a.b.b.a.a.a.a.a ENSGT01100000263511.b.a.b.a.b.a.b.b.a.b.a.b.a.b.b.b.a.a.b.a.a ENSGT00950000182953.B.a.f.b ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 Cow DUPLICATION Cow MODERN SPECIES 23 COPG2 (ENSBTAG00000017245) TSGA13 (ENSBTAG00000020183) KLF14 (ENSBTAG00000052251) ENSBTAG00000051415 MKLN1 (ENSBTAG00000010437) PODXL (ENSBTAG00000010452) ENSBTAG00000054979 PLXNA4 (ENSBTAG00000014543) ENSBTAG00000049946 CHCHD3 (ENSBTAG00000024723) EXOC4 (ENSBTAG00000014112) LRGUK (ENSBTAG00000015773) SLC35B4 (ENSBTAG00000003372) AKR1B1 (ENSBTAG00000009902) AKR1B10 (ENSBTAG00000001582) BPGM (ENSBTAG00000008895) ##22 CALD1 (ENSBTAG00000013953) ENSBTAG00000052279 AGBL3 (ENSBTAG00000013976) TMEM140 (ENSBTAG00000001576) CYREN (ENSBTAG00000001773) WDR91 (ENSBTAG00000017905) STRA8 (ENSBTAG00000001346) ENSBTAG00000031548 ENSBTAG00000049834 ENSBTAG00000047605 ENSBTAG00000052991 ENSBTAG00000047088 CNOT4 (ENSBTAG00000017919) NUP205 (ENSBTAG00000011127) STMP1 (ENSBTAG00000051809) Cow MODERN SPECIES 25 TMPRSS11BNL (ENSBTAG00000048377) TMPRSS11F (ENSBTAG00000004412) ENSBTAG00000025920 TMPRSS11A (ENSBTAG00000020298) TMPRSS11D (ENSBTAG00000001925) ENSBTAG00000038648 GNRHR (ENSBTAG00000000438) UBA6 (ENSBTAG00000006837) STAP1 (ENSBTAG00000000962) CENPC (ENSBTAG00000001323) ENSBTAG00000052362 ENSBTAG00000053125 EPHA5 (ENSBTAG00000009438) ENSBTAG00000050977 TECRL (ENSBTAG00000024826) ENSBTAG00000054580 ##22 ENSBTAG00000053291 ADGRL3 (ENSBTAG00000013918) ENSBTAG00000049338 IGFBP7 (ENSBTAG00000019368) ENSBTAG00000052745 POLR2B (ENSBTAG00000019366) ENSBTAG00000050628 NOA1A (ENSBTAG00000019362) RESTB (ENSBTAG00000011789) SPINK2B (ENSBTAG00000032560) HOPX (ENSBTAG00000002333) ENSBTAG00000054014 THEGL (ENSBTAG00000051380) ARL9 (ENSBTAG00000010615) SRP72 (ENSBTAG00000010593) Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005026196 ENSBIXG00005026220 ENSBIXG00005026238 PLXNA4 (ENSBIXG00005026315) ENSBIXG00005026343 CHCHD3 (ENSBIXG00005004506) ENSBIXG00005026405 EXOC4 (ENSBIXG00005026482) LRGUK (ENSBIXG00005026545) SLC35B4 (ENSBIXG00005026563) ENSBIXG00005026604 ENSBIXG00005026612 ENSBIXG00005026632 ENSBIXG00005007644 ENSBIXG00005004556 ENSBIXG00005026696 ##22 CALD1 (ENSBIXG00005007412) AGBL3 (ENSBIXG00005026807) TMEM140 (ENSBIXG00005026827) CYREN (ENSBIXG00005026852) WDR91 (ENSBIXG00005026934) STRA8 (ENSBIXG00005026986) ENSBIXG00005026996 ENSBIXG00005027012 ENSBIXG00005027024 ENSBIXG00005027032 ENSBIXG00005027036 ENSBIXG00005027149 CNOT4 (ENSBIXG00005004693) NUP205 (ENSBIXG00005004733) ENSBIXG00005027586 American bison MODERN SPECIES 3374 MEST (ENSBBBG00000001080) COPG2 (ENSBBBG00000001005) TSGA13 (ENSBBBG00000000982) ENSBBBG00000000970 ENSBBBG00000000956 MKLN1 (ENSBBBG00000000892) ENSBBBG00000000875 PLXNA4 (ENSBBBG00000014927) CHCHD3 (ENSBBBG00000003604) EXOC4 (ENSBBBG00000014964) LRGUK (ENSBBBG00000003576) SLC35B4 (ENSBBBG00000003728) ENSBBBG00000015020 ENSBBBG00000015030 AKR1B10 (ENSBBBG00000015042) ENSBBBG00000015051 ##22 CALD1 (ENSBBBG00000015221) AGBL3 (ENSBBBG00000003794) TMEM140 (ENSBBBG00000007033) CYREN (ENSBBBG00000015303) WDR91 (ENSBBBG00000001393) STRA8 (ENSBBBG00000001380) ENSBBBG00000001373 CNOT4 (ENSBBBG00000015333) NUP205 (ENSBBBG00000015387) STMP1 (ENSBBBG00000003840) SLC13A4 (ENSBBBG00000002730) FAM180A (ENSBBBG00000015409) MTPN (ENSBBBG00000015424) ENSBBBG00000015434 CHRM2 (ENSBBBG00000015443) Bovinae ANCESTRAL SPECIES 102 ENSGT00940000153272.a.b.y ENSGT00950000182926.a.d.b ##22 ENSGT01100000263481.n.a.b.a.b.b.a.a American bison MODERN SPECIES 3156 MTHFD1 (ENSBBBG00000022812) AKAP5 (ENSBBBG00000022818) ZBTB25 (ENSBBBG00000022827) ZBTB1 (ENSBBBG00000022836) HSPA2 (ENSBBBG00000022900) PPP1R36 (ENSBBBG00000022919) ENSBBBG00000022933 SPTB (ENSBBBG00000006063) CHURC1 (ENSBBBG00000023144) GPX2 (ENSBBBG00000023161) RAB15 (ENSBBBG00000000492) FNTB (ENSBBBG00000000470) MAX (ENSBBBG00000006077) FUT8 (ENSBBBG00000023264) ENSBBBG00000023270 ENSBBBG00000023277 ##22 CCDC196 (ENSBBBG00000023301) GPHN (ENSBBBG00000023449) GARIN2 (ENSBBBG00000023467) PALS1 (ENSBBBG00000023508) ENSBBBG00000023569 EIF2S1 (ENSBBBG00000007485) PLEK2 (ENSBBBG00000023625) ENSBBBG00000023630 TMEM229B (ENSBBBG00000000315) PLEKHH1 (ENSBBBG00000008417) PIGH (ENSBBBG00000023681) ENSBBBG00000023690 ARG2 (ENSBBBG00000023706) VTI1B (ENSBBBG00000006185) RDH11 (ENSBBBG00000023755) Bos ANCESTRAL SPECIES 272 ENSGT00950000182926.a.d.b ##22 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.b Bos_a ANCESTRAL SPECIES 12 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT01100000263480.a.a.b.b.b.a.a.b.b.a.a.b ENSGT00730000111314 ENSGT00960000189944.a.a ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z.a.a.b.b.a ENSGT00940000153272.a.b.y ENSGT00950000182926.a.d.b ##22 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.b ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a.f.a.a.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00390000011359.b.a Domestic yak MODERN SPECIES 23 MEST (ENSBGRG00000005425) COPG2 (ENSBGRG00000005357) TSGA13 (ENSBGRG00000005301) KLF14 (ENSBGRG00000005287) ENSBGRG00000005256 MKLN1 (ENSBGRG00000005103) ENSBGRG00000005044 PLXNA4 (ENSBGRG00000004943) CHCHD3 (ENSBGRG00000004798) ENSBGRG00000004768 EXOC4 (ENSBGRG00000004701) ENSBGRG00000004512 SLC35B4 (ENSBGRG00000004432) ENSBGRG00000004261 ENSBGRG00000004204 ENSBGRG00000004162 ##22 ENSBGRG00000004141 ENSBGRG00000004004 ENSBGRG00000003945 TMEM140 (ENSBGRG00000003927) CYREN (ENSBGRG00000003897) WDR91 (ENSBGRG00000003807) STRA8 (ENSBGRG00000003725) ENSBGRG00000003642 CNOT4 (ENSBGRG00000003574) NUP205 (ENSBGRG00000003467) STMP1 (ENSBGRG00000003444) SLC13A4 (ENSBGRG00000003431) FAM180A (ENSBGRG00000003419) ENSBGRG00000003398 ENSBGRG00000003392 Siberian musk deer MODERN SPECIES 84 COPG2 (ENSMMSG00000016326) TSGA13 (ENSMMSG00000016276) KLF14 (ENSMMSG00000016267) ENSMMSG00000016231 ENSMMSG00000016214 MKLN1 (ENSMMSG00000016151) ENSMMSG00000016123 PLXNA4 (ENSMMSG00000015994) CHCHD3 (ENSMMSG00000015903) ENSMMSG00000015861 ENSMMSG00000015848 LRGUK (ENSMMSG00000015775) SLC35B4 (ENSMMSG00000015747) ENSMMSG00000015726 ENSMMSG00000015688 BPGM (ENSMMSG00000015680) ##22 CALD1 (ENSMMSG00000015571) AGBL3 (ENSMMSG00000015523) TMEM140 (ENSMMSG00000015508) CYREN (ENSMMSG00000015484) WDR91 (ENSMMSG00000015409) STRA8 (ENSMMSG00000015364) ENSMMSG00000015300 ENSMMSG00000014320 NUP205 (ENSMMSG00000003819) STMP1 (ENSMMSG00000003799) SLC13A4 (ENSMMSG00000003771) FAM180A (ENSMMSG00000003755) ENSMMSG00000003748 MTPN (ENSMMSG00000003734) CHRM2 (ENSMMSG00000003721) Yarkand deer MODERN SPECIES 9 TSGA13 (ENSCHYG00000023089) KLF14 (ENSCHYG00000023121) ENSCHYG00000023181 ENSCHYG00000023197 MKLN1 (ENSCHYG00000023221) ENSCHYG00000023373 ENSCHYG00000023404 PLXNA4 (ENSCHYG00000023427) CHCHD3 (ENSCHYG00000023548) EXOC4 (ENSCHYG00000023677) LRGUK (ENSCHYG00000023792) SLC35B4 (ENSCHYG00000023964) ENSCHYG00000024001 ENSCHYG00000024043 ENSCHYG00000024119 BPGM (ENSCHYG00000024151) ##22 CALD1 (ENSCHYG00000024195) AGBL3 (ENSCHYG00000024562) TMEM140 (ENSCHYG00000024615) CYREN (ENSCHYG00000024621) WDR91 (ENSCHYG00000024656) STRA8 (ENSCHYG00000024771) ENSCHYG00000024804 ENSCHYG00000024840 CNOT4 (ENSCHYG00000024863) NUP205 (ENSCHYG00000025018) STMP1 (ENSCHYG00000025155) SLC13A4 (ENSCHYG00000025174) FAM180A (ENSCHYG00000025190) ENSCHYG00000025207 MTPN (ENSCHYG00000025220) Camelidae ANCESTRAL SPECIES 2 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.z ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Arabian camel MODERN SPECIES 33 CPA1 (ENSCDRG00005001124) CEP41 (ENSCDRG00005001191) MEST (ENSCDRG00005001231) COPG2 (ENSCDRG00005001273) TSGA13 (ENSCDRG00005001295) ENSCDRG00005001303 ENSCDRG00005001325 MKLN1 (ENSCDRG00005001350) ENSCDRG00005001438 PLXNA4 (ENSCDRG00005001474) CHCHD3 (ENSCDRG00005001535) EXOC4 (ENSCDRG00005001605) ENSCDRG00005001662 SLC35B4 (ENSCDRG00005001779) AKR1B1 (ENSCDRG00005001802) BPGM (ENSCDRG00005001823) ##22 CALD1 (ENSCDRG00005001843) AGBL3 (ENSCDRG00005001907) TMEM140 (ENSCDRG00005001928) CYREN (ENSCDRG00005001934) WDR91 (ENSCDRG00005001954) STRA8 (ENSCDRG00005001986) ENSCDRG00005001999 CNOT4 (ENSCDRG00005002027) NUP205 (ENSCDRG00005002090) STMP1 (ENSCDRG00005002228) SLC13A4 (ENSCDRG00005002242) FAM180A (ENSCDRG00005002275) ENSCDRG00005002300 CHRM2 (ENSCDRG00005002309) PTN (ENSCDRG00005002319) Alpaca MODERN SPECIES 2007 BPGM (ENSVPAG00000004090) ##22 CALD1 (ENSVPAG00000004092) AGBL3 (ENSVPAG00000004094) SOSTDC1 (ENSVPAG00000004095) CRPPA (ENSVPAG00000004100) WDR91 (ENSVPAG00000004105) ENSVPAG00000004107 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 Carnivora ANCESTRAL SPECIES 15 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 Ursidae ANCESTRAL SPECIES 12 ENSGT00940000158082.b.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Ursus ANCESTRAL SPECIES 199 ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Polar bear MODERN SPECIES 304 EXOC4 (ENSUMAG00000014868) ENSUMAG00000014897 SLC35B4 (ENSUMAG00000014937) AKR1B1 (ENSUMAG00000014946) BPGM (ENSUMAG00000014952) ##22 CALD1 (ENSUMAG00000014979) ENSUMAG00000015035 ENSUMAG00000015037 ENSUMAG00000015042 CYREN (ENSUMAG00000015043) WDR91 (ENSUMAG00000015068) STRA8 (ENSUMAG00000015329) ENSUMAG00000015344 CNOT4 (ENSUMAG00000015351) NUP205 (ENSUMAG00000015362) STMP1 (ENSUMAG00000015385) SLC13A4 (ENSUMAG00000015393) FAM180A (ENSUMAG00000015434) ENSUMAG00000000106 MTPN (ENSUMAG00000000163) American black bear MODERN SPECIES 7713 BPGM (ENSUAMG00000004289) ##22 Giant Panda MODERN SPECIES CPA1 (ENSAMEG00000005552) CEP41 (ENSAMEG00000005624) MEST (ENSAMEG00000005659) COPG2 (ENSAMEG00000005681) TSGA13 (ENSAMEG00000005757) ENSAMEG00000005763 ENSAMEG00000027691 MKLN1 (ENSAMEG00000005768) ENSAMEG00000005820 PLXNA4 (ENSAMEG00000030883) CHCHD3 (ENSAMEG00000028709) EXOC4 (ENSAMEG00000016825) ENSAMEG00000016833 SLC35B4 (ENSAMEG00000025536) AKR1B1 (ENSAMEG00000016140) BPGM (ENSAMEG00000016162) ##22 CALD1 (ENSAMEG00000016171) ENSAMEG00000030658 AGBL3 (ENSAMEG00000012164) ENSAMEG00000020000 CYREN (ENSAMEG00000031355) WDR91 (ENSAMEG00000012136) STRA8 (ENSAMEG00000012133) ENSAMEG00000012118 CNOT4 (ENSAMEG00000012081) NUP205 (ENSAMEG00000012008) STMP1 (ENSAMEG00000027557) SLC13A4 (ENSAMEG00000011942) FAM180A (ENSAMEG00000011939) MTPN (ENSAMEG00000018083) CHRM2 (ENSAMEG00000019733) Mustelinae ANCESTRAL SPECIES 9 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Ferret MODERN SPECIES 168 CPA1 (ENSMPUG00000005102) CEP41 (ENSMPUG00000005094) MEST (ENSMPUG00000005084) COPG2 (ENSMPUG00000005067) KLF14 (ENSMPUG00000005061) ENSMPUG00000005059 MKLN1 (ENSMPUG00000005050) ENSMPUG00000004996 ENSMPUG00000004989 PLXNA4 (ENSMPUG00000004437) CHCHD3 (ENSMPUG00000004424) ENSMPUG00000004408 LRGUK (ENSMPUG00000004360) SLC35B4 (ENSMPUG00000004350) AKR1B1 (ENSMPUG00000004341) BPGM (ENSMPUG00000004331) ##22 CALD1 (ENSMPUG00000004283) AGBL3 (ENSMPUG00000004266) TMEM140 (ENSMPUG00000018740) CYREN (ENSMPUG00000004237) WDR91 (ENSMPUG00000004117) STRA8 (ENSMPUG00000004113) ENSMPUG00000004104 CNOT4 (ENSMPUG00000004089) NUP205 (ENSMPUG00000004069) SLC13A4 (ENSMPUG00000004056) FAM180A (ENSMPUG00000004053) MTPN (ENSMPUG00000004042) ENSMPUG00000004048 CHRM2 (ENSMPUG00000004037) PTN (ENSMPUG00000003999) American mink MODERN SPECIES 3 COPG2 (ENSNVIG00000022817) TSGA13 (ENSNVIG00000022815) ENSNVIG00000022811 ENSNVIG00000022805 MKLN1 (ENSNVIG00000022793) ENSNVIG00000022791 PLXA4 (ENSNVIG00000022775) CHCHD3 (ENSNVIG00000022770) ENSNVIG00000022762 ENSNVIG00000022761 EXOC4 (ENSNVIG00000022758) LRGUK (ENSNVIG00000022749) S35B4 (ENSNVIG00000022737) ENSNVIG00000022736 AKR1B1 (ENSNVIG00000022733) PMGE (ENSNVIG00000022729) ##22 CALD1 (ENSNVIG00000022676) AGBL3 (ENSNVIG00000022664) TMEM140 (ENSNVIG00000022657) CYREN (ENSNVIG00000022652) WDR91 (ENSNVIG00000022629) STRA8 (ENSNVIG00000022612) ENSNVIG00000022600 CNOT4 (ENSNVIG00000022549) NUP205 (ENSNVIG00000022522) STMP1 (ENSNVIG00000022513) SLC13A4 (ENSNVIG00000022502) F180A (ENSNVIG00000022491) ENSNVIG00000022485 ENSNVIG00000022480 CHRM2 (ENSNVIG00000022458) Canidae ANCESTRAL SPECIES 49 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Canis_lupus ANCESTRAL SPECIES 42 ENSGT00940000161175 ENSGT00940000156207.a.a.a ENSGT00390000018500.a ENSGT00570000079564 ENSGT00730000111648 ENSGT00390000010671 ENSGT01090000259995.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Dingo MODERN SPECIES 392 ENSCAFG00020000865 PGBD2 (ENSCAFG00020000860) ZNF692 (ENSCAFG00020000840) ENSCAFG00020000825 SH3BP5L (ENSCAFG00020000816) ENSCAFG00020000811 LYPD8 (ENSCAFG00020000804) ENSCAFG00020000797 ENSCAFG00020000790 BPGM (ENSCAFG00020000783) ##22 CALD1 (ENSCAFG00020000605) ENSCAFG00020000593 TMEM140 (ENSCAFG00020000560) CYREN (ENSCAFG00020000536) WDR91 (ENSCAFG00020000524) ENSCAFG00020000494 STRA8 (ENSCAFG00020000453) ENSCAFG00020000130 CNOT4 (ENSCAFG00020000093) NUP205 (ENSCAFG00020026817) STMP1 (ENSCAFG00020026794) SLC13A4 (ENSCAFG00020026792) FAM180A (ENSCAFG00020026791) MTPN (ENSCAFG00020026790) CHRM2 (ENSCAFG00020026786) Dog MODERN SPECIES 7 H2AFV (ENSCAFG00845011363) MYO1G (ENSCAFG00845011123) CCM2 (ENSCAFG00845011022) ENSCAFG00845010993 TBRG4 (ENSCAFG00845010926) ENSCAFG00845010904 ENSCAFG00845010857 PGBD2 (ENSCAFG00845010784) ENSCAFG00845010757 ZNF692 (ENSCAFG00845010414) SH3BP5L (ENSCAFG00845010288) LYPD8 (ENSCAFG00845010244) ENSCAFG00845010210 ENSCAFG00845010182 OR2Z2 (ENSCAFG00845010173) BPGM (ENSCAFG00845010141) ##22 ENSCAFG00845010110 CALD1 (ENSCAFG00845009991) AGBL3 (ENSCAFG00845009797) TMEM140 (ENSCAFG00845009745) CYREN (ENSCAFG00845009712) WDR91 (ENSCAFG00845009632) ENSCAFG00845009593 STRA8 (ENSCAFG00845009545) ENSCAFG00845009361 CNOT4 (ENSCAFG00845009204) NUP205 (ENSCAFG00845009062) SLC13A4 (ENSCAFG00845008899) FAM180A (ENSCAFG00845008868) MTPN (ENSCAFG00845008843) CHRM2 (ENSCAFG00845008775) Red fox MODERN SPECIES 197 BPGM (ENSVVUG00000005810) ##22 ENSVVUG00000005818 ENSVVUG00000005824 AGBL3 (ENSVVUG00000005826) TMEM140 (ENSVVUG00000005836) CYREN (ENSVVUG00000005841) WDR91 (ENSVVUG00000005854) STRA8 (ENSVVUG00000005896) ENSVVUG00000005907 CNOT4 (ENSVVUG00000006200) NUP205 (ENSVVUG00000006230) STMP1 (ENSVVUG00000006312) SLC13A4 (ENSVVUG00000006322) FAM180A (ENSVVUG00000006357) MTPN (ENSVVUG00000006360) CHRM2 (ENSVVUG00000006385) Felidae ANCESTRAL SPECIES 13 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT01030000234637.a.b.b.t ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Panthera ANCESTRAL SPECIES 1 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT00390000009113.a.a.q.a.b.a ENSGT01050000244850.B ENSGT00390000000903.a ENSGT01030000234637.a.b.b.t ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Panthera_a ANCESTRAL SPECIES ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT00390000009113.a.a.q.a.b.a ENSGT01050000244850.B ENSGT00390000000903.a ENSGT01030000234637.a.b.b.t ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 leopard MODERN SPECIES 23 CEP41 (ENSPPRG00000000444) MEST (ENSPPRG00000000328) COPG2 (ENSPPRG00000000184) TSGA13 (ENSPPRG00000022621) KLF14 (ENSPPRG00000019651) ENSPPRG00000019636 MKLN1 (ENSPPRG00000022759) ENSPPRG00000022783 PLXNA4 (ENSPPRG00000022804) CHCHD3 (ENSPPRG00000023081) ENSPPRG00000023094 EXOC4 (ENSPPRG00000023184) LRGUK (ENSPPRG00000023356) SLC35B4 (ENSPPRG00000023442) AKR1B1 (ENSPPRG00000023456) BPGM (ENSPPRG00000023459) ##22 CALD1 (ENSPPRG00000023518) ENSPPRG00000019599 AGBL3 (ENSPPRG00000023662) TMEM140 (ENSPPRG00000019566) CYREN (ENSPPRG00000023736) WDR91 (ENSPPRG00000023827) STRA8 (ENSPPRG00000023856) ENSPPRG00000023901 CNOT4 (ENSPPRG00000023940) NUP205 (ENSPPRG00000023993) STMP1 (ENSPPRG00000024016) SLC13A4 (ENSPPRG00000024030) FAM180A (ENSPPRG00000024112) ENSPPRG00000024149 MTPN (ENSPPRG00000024153) lion MODERN SPECIES 2 CEP41 (ENSPLOG00000017870) MEST (ENSPLOG00000017977) COPG2 (ENSPLOG00000018298) TSGA13 (ENSPLOG00000018365) KLF14 (ENSPLOG00000018425) ENSPLOG00000018463 MKLN1 (ENSPLOG00000018477) ENSPLOG00000018516 ENSPLOG00000018582 PLXNA4 (ENSPLOG00000018621) CHCHD3 (ENSPLOG00000018721) EXOC4 (ENSPLOG00000018820) LRGUK (ENSPLOG00000018895) SLC35B4 (ENSPLOG00000019037) AKR1B1 (ENSPLOG00000019077) BPGM (ENSPLOG00000019118) ##22 CALD1 (ENSPLOG00000019198) ENSPLOG00000019500 AGBL3 (ENSPLOG00000019534) TMEM140 (ENSPLOG00000019567) CYREN (ENSPLOG00000019581) WDR91 (ENSPLOG00000019617) STRA8 (ENSPLOG00000019778) ENSPLOG00000019837 CNOT4 (ENSPLOG00000019929) NUP205 (ENSPLOG00000020082) STMP1 (ENSPLOG00000020135) SLC13A4 (ENSPLOG00000020157) FAM180A (ENSPLOG00000020229) MTPN (ENSPLOG00000020286) CHRM2 (ENSPLOG00000020316) Tiger MODERN SPECIES 79 COPG2 (ENSPTIG00000011364) TSGA13 (ENSPTIG00000009861) ENSPTIG00000006451 MKLN1 (ENSPTIG00000004140) ENSPTIG00000001970 PLXNA4 (ENSPTIG00000016088) CHCHD3 (ENSPTIG00000014267) EXOC4 (ENSPTIG00000012703) LRGUK (ENSPTIG00000009757) SLC35B4 (ENSPTIG00000007211) AKR1B1 (ENSPTIG00000006234) BPGM (ENSPTIG00000004386) ##22 CALD1 (ENSPTIG00000015307) ENSPTIG00000006003 AGBL3 (ENSPTIG00000012266) TMEM140 (ENSPTIG00000005971) CYREN (ENSPTIG00000011601) WDR91 (ENSPTIG00000008642) STRA8 (ENSPTIG00000007668) ENSPTIG00000006532 CNOT4 (ENSPTIG00000016601) NUP205 (ENSPTIG00000014737) STMP1 (ENSPTIG00000014493) SLC13A4 (ENSPTIG00000013706) FAM180A (ENSPTIG00000013370) Cat MODERN SPECIES 1 CEP41 (ENSFCAG00000014235) MEST (ENSFCAG00000022984) COPG2 (ENSFCAG00000028267) TSGA13 (ENSFCAG00000024753) KLF14 (ENSFCAG00000046206) ENSFCAG00000035872 MKLN1 (ENSFCAG00000013117) PODXL (ENSFCAG00000013118) PLXNA4 (ENSFCAG00000013120) CHCHD3 (ENSFCAG00000006958) ENSFCAG00000024163 EXOC4 (ENSFCAG00000030688) LRGUK (ENSFCAG00000012892) SLC35B4 (ENSFCAG00000040517) AKR1B1 (ENSFCAG00000012894) BPGM (ENSFCAG00000023812) ##22 CALD1 (ENSFCAG00000032015) AGBL3 (ENSFCAG00000022109) TMEM140 (ENSFCAG00000011895) CYREN (ENSFCAG00000045191) WDR91 (ENSFCAG00000011899) STRA8 (ENSFCAG00000030903) ENSFCAG00000022370 CNOT4 (ENSFCAG00000011904) NUP205 (ENSFCAG00000015574) STMP1 (ENSFCAG00000044879) SLC13A4 (ENSFCAG00000042890) FAM180A (ENSFCAG00000021885) MTPN (ENSFCAG00000028537) CHRM2 (ENSFCAG00000029414) PTN (ENSFCAG00000037866) Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT01100000267096 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 Equus ANCESTRAL SPECIES 13 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT01100000267096 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000013192 ENSGT00390000014089 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a.d.b ENSGT00950000182953.B.a.d.a ENSGT00950000182953.B.a.c.b ENSGT00950000182953.B.a.c.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b Donkey MODERN SPECIES MEST (ENSEASG00005008852) COPG2 (ENSEASG00005014791) TSGA13 (ENSEASG00005014789) KLF14 (ENSEASG00005014787) ENSEASG00005037986 MKLN1 (ENSEASG00005014771) ENSEASG00005014767 PLXNA4 (ENSEASG00005014760) CHCHD3 (ENSEASG00005030445) ENSEASG00005031855 ENSEASG00005035544 EXOC4 (ENSEASG00005014752) ENSEASG00005014749 SLC35B4 (ENSEASG00005014742) AKR1B1 (ENSEASG00005014736) BPGM (ENSEASG00005014734) ##22 CALD1 (ENSEASG00005014687) AGBL3 (ENSEASG00005014671) CYREN (ENSEASG00005014667) TMEM140 (ENSEASG00005034768) ENSEASG00005034726 STRA8 (ENSEASG00005014656) ENSEASG00005014640 ENSEASG00005014637 ENSEASG00005032668 ENSEASG00005029342 ENSEASG00005014652 ENSEASG00005014633 CNOT4 (ENSEASG00005014430) ENSEASG00005014409 NUP205 (ENSEASG00005014292) Horse MODERN SPECIES 25 COPG2 (ENSECAG00000013579) TSGA13 (ENSECAG00000024017) MKLN1 (ENSECAG00000024078) ENSECAG00000028562 PLXNA4 (ENSECAG00000011570) CHCHD3 (ENSECAG00000000861) EXOC4 (ENSECAG00000004434) ENSECAG00000049522 ENSECAG00000047311 ENSECAG00000003112 ENSECAG00000055938 LRGUK (ENSECAG00000009957) ENSECAG00000055016 SLC35B4 (ENSECAG00000012567) AKR1B1 (ENSECAG00000014271) BPGM (ENSECAG00000000655) ##22 CALD1 (ENSECAG00000006844) ENSECAG00000056806 ENSECAG00000048050 CYREN (ENSECAG00000057452) WDR91 (ENSECAG00000009789) STRA8 (ENSECAG00000014454) ENSECAG00000017681 ENSECAG00000049355 ENSECAG00000017839 ENSECAG00000049617 ENSECAG00000050999 CNOT4 (ENSECAG00000020262) ENSECAG00000040275 NUP205 (ENSECAG00000009751) SLC13A4 (ENSECAG00000015127) Chiroptera ANCESTRAL SPECIES 41 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Megabat MODERN SPECIES 4294 BPGM (ENSPVAG00000014407) ##22 Microchiroptera ANCESTRAL SPECIES 23 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b.b.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Microbat MODERN SPECIES 983 MEST (ENSMLUG00000015437) COPG2 (ENSMLUG00000027742) TSGA13 (ENSMLUG00000000923) MKLN1 (ENSMLUG00000013672) ENSMLUG00000013693 ENSMLUG00000029484 PLXNA4 (ENSMLUG00000006435) ENSMLUG00000029628 CHCHD3 (ENSMLUG00000009340) ENSMLUG00000029181 ENSMLUG00000010886 LRGUK (ENSMLUG00000000917) SLC35B4 (ENSMLUG00000000930) AKR1B1 (ENSMLUG00000007270) AKR1B10 (ENSMLUG00000008625) BPGM (ENSMLUG00000009875) ##22 ENSMLUG00000024473 ENSMLUG00000008925 CYREN (ENSMLUG00000008937) WDR91 (ENSMLUG00000008948) ENSMLUG00000026521 CNOT4 (ENSMLUG00000008260) NUP205 (ENSMLUG00000010902) SLC13A4 (ENSMLUG00000010988) FAM180A (ENSMLUG00000011029) MTPN (ENSMLUG00000005504) ENSMLUG00000024996 ENSMLUG00000000371 ENSMLUG00000010078 CHRM2 (ENSMLUG00000017487) PTN (ENSMLUG00000023860) Greater horseshoe bat MODERN SPECIES 18 CPA1 (ENSRFEG00010013736) CEP41 (ENSRFEG00010013530) MEST (ENSRFEG00010013405) COPG2 (ENSRFEG00010013290) TSGA13 (ENSRFEG00010013166) ENSRFEG00010013120 KLF14 (ENSRFEG00010013103) MKLN1 (ENSRFEG00010012860) ENSRFEG00010012788 PLXNA4 (ENSRFEG00010012670) CHCHD3 (ENSRFEG00010012528) EXOC4 (ENSRFEG00010012444) ENSRFEG00010012129 SLC35B4 (ENSRFEG00010011992) AKR1B1 (ENSRFEG00010011940) BPGM (ENSRFEG00010011896) ##22 CALD1 (ENSRFEG00010011686) ENSRFEG00010011658 AGBL3 (ENSRFEG00010011165) TMEM140 (ENSRFEG00010011113) CYREN (ENSRFEG00010011048) WDR91 (ENSRFEG00010010825) STRA8 (ENSRFEG00010010679) ENSRFEG00010010588 CNOT4 (ENSRFEG00010010344) NUP205 (ENSRFEG00010010231) STMP1 (ENSRFEG00010010198) SLC13A4 (ENSRFEG00010010015) FAM180A (ENSRFEG00010009978) MTPN (ENSRFEG00010009955) CHRM2 (ENSRFEG00010009930) Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Hedgehog MODERN SPECIES 6757 BPGM (ENSEEUG00000010859) ##22 Common shrew DUPLICATION Common shrew MODERN SPECIES 5255 ENSSARG00000000674 ##22 Common shrew MODERN SPECIES 8767 ENSSARG00000014322 ##22 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 Primates ANCESTRAL SPECIES 12 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702.d.a ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Lemuriformes ANCESTRAL SPECIES 4 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702.d.a ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Mouse lemur MODERN SPECIES 2 CEP41 (ENSMICG00000006125) MEST (ENSMICG00000006129) COPG2 (ENSMICG00000003013) TSGA13 (ENSMICG00000006604) ENSMICG00000044295 MKLN1 (ENSMICG00000004385) ENSMICG00000042010 PLXNA4 (ENSMICG00000017140) CHCHD3 (ENSMICG00000038427) EXOC4 (ENSMICG00000011281) LRGUK (ENSMICG00000011293) SLC35B4 (ENSMICG00000001914) AKR1B1 (ENSMICG00000001921) ENSMICG00000036258 ENSMICG00000029285 BPGM (ENSMICG00000014530) ##22 CALD1 (ENSMICG00000014537) AGBL3 (ENSMICG00000014568) CYREN (ENSMICG00000001655) WDR91 (ENSMICG00000001656) STRA8 (ENSMICG00000001661) ENSMICG00000026664 CNOT4 (ENSMICG00000001667) ENSMICG00000027575 NUP205 (ENSMICG00000032825) STMP1 (ENSMICG00000036535) SLC13A4 (ENSMICG00000042199) FAM180A (ENSMICG00000032646) MTPN (ENSMICG00000029457) ENSMICG00000030266 CHRM2 (ENSMICG00000043086) Lemuriformes_a ANCESTRAL SPECIES 253 ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a Greater bamboo lemur MODERN SPECIES 557 PLXNA4 (ENSPSMG00000016542) CHCHD3 (ENSPSMG00000016461) EXOC4 (ENSPSMG00000016387) LRGUK (ENSPSMG00000016353) SLC35B4 (ENSPSMG00000016343) AKR1B1 (ENSPSMG00000016324) AKR1B10 (ENSPSMG00000016275) BPGM (ENSPSMG00000016266) ##22 CALD1 (ENSPSMG00000016132) Coquerels sifaka MODERN SPECIES 471 CHCHD3 (ENSPCOG00000019179) ENSPCOG00000020008 ENSPCOG00000019479 ENSPCOG00000016376 LRGUK (ENSPCOG00000022323) SLC35B4 (ENSPCOG00000015654) AKR1B1 (ENSPCOG00000022399) ENSPCOG00000009761 ENSPCOG00000018599 BPGM (ENSPCOG00000013140) ##22 CALD1 (ENSPCOG00000018522) Bushbaby MODERN SPECIES 164 COPG2 (ENSOGAG00000026001) TSGA13 (ENSOGAG00000001670) KLF14 (ENSOGAG00000030933) MKLN1 (ENSOGAG00000014970) ENSOGAG00000014978 PLXNA4 (ENSOGAG00000012231) ENSOGAG00000031838 ENSOGAG00000009215 LRGUK (ENSOGAG00000009222) SLC35B4 (ENSOGAG00000016153) AKR1B1 (ENSOGAG00000016156) ENSOGAG00000016160 ENSOGAG00000024447 BPGM (ENSOGAG00000004326) ##22 CALD1 (ENSOGAG00000027315) AGBL3 (ENSOGAG00000030615) TMEM140 (ENSOGAG00000010880) CYREN (ENSOGAG00000029558) WDR91 (ENSOGAG00000000997) STRA8 (ENSOGAG00000000998) ENSOGAG00000033515 CNOT4 (ENSOGAG00000015499) NUP205 (ENSOGAG00000003160) SLC13A4 (ENSOGAG00000003166) FAM180A (ENSOGAG00000004968) MTPN (ENSOGAG00000016983) CHRM2 (ENSOGAG00000009009) PTN (ENSOGAG00000011050) DGKI (ENSOGAG00000010837) Haplorrhini ANCESTRAL SPECIES 8 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 ENSGT00430000031071 ENSGT00940000158940 Simiiformes ANCESTRAL SPECIES 12 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 ENSGT00430000031071 ENSGT00940000158940 Catarrhini ANCESTRAL SPECIES 6 ENSGT00510000047602.q.a ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000164182.b ENSGT00940000164182.a.a ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602.q.a.a ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.o ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a ENSGT00940000158940 Hominidae ANCESTRAL SPECIES 11 ENSGT00510000047602.q.a.a ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.b.b ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.o ENSGT00940000164182.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a ENSGT00940000158940 Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00950000183014.f.a.g.b.a.a ENSGT00390000005809.m.b ENSGT01050000244850.B ENSGT00390000000903.a.f.b.b ENSGT00390000007552.f.x.h.b ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.o ENSGT00940000164182.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00940000154507.g.a ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000010003.w.a.d ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00950000183014.f.a.g.b.a.a ENSGT00390000005809.m.b ENSGT01050000244850.B ENSGT00390000000903.a.f.b.b ENSGT00390000007552.f.x.h.b ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.o ENSGT00940000164182.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00940000154507.g.a ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000010003.w.a.d ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Pan ANCESTRAL SPECIES 13 ENSGT00940000163415 ENSGT00940000154668.`b ENSGT00390000001702 ENSGT00730000111314 ENSGT00950000183014.f.a.g.b.a.a ENSGT00390000005809.m.b ENSGT01050000244850.B ENSGT00390000000903.a.f.b.b ENSGT00390000007552.f.x.h.b ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.o ENSGT00940000164182.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00940000154507.g.a ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000010003.w.a.d ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 Bonobo MODERN SPECIES 20 MKLN1 (ENSPPAG00000024879) PODXL (ENSPPAG00000033899) ENSPPAG00000025319 ENSPPAG00000041347 ENSPPAG00000039044 ENSPPAG00000033968 ENSPPAG00000019389 ENSPPAG00000007374 ENSPPAG00000035760 EXOC4 (ENSPPAG00000035477) LRGUK (ENSPPAG00000026937) SLC35B4 (ENSPPAG00000036396) ENSPPAG00000010783 AKR1B10 (ENSPPAG00000032122) AKR1B15 (ENSPPAG00000027085) BPGM (ENSPPAG00000028646) ##22 CALD1 (ENSPPAG00000033595) ENSPPAG00000042375 ENSPPAG00000039575 TMEM140 (ENSPPAG00000009309) ENSPPAG00000041815 WDR91 (ENSPPAG00000043535) STRA8 (ENSPPAG00000019246) CNOT4 (ENSPPAG00000041937) ENSPPAG00000043864 NUP205 (ENSPPAG00000007169) STMP1 (ENSPPAG00000027554) SLC13A4 (ENSPPAG00000037383) FAM180A (ENSPPAG00000040338) MTPN (ENSPPAG00000041624) ENSPPAG00000025209 Chimpanzee MODERN SPECIES 20 KLF14 (ENSPTRG00000019701) ENSPTRG00000044862 MKLN1 (ENSPTRG00000022979) PODXL (ENSPTRG00000019705) ENSPTRG00000043790 ENSPTRG00000045758 PLXNA4 (ENSPTRG00000041884) CHCHD3 (ENSPTRG00000019711) ENSPTRG00000039432 EXOC4 (ENSPTRG00000019712) LRGUK (ENSPTRG00000019715) SLC35B4 (ENSPTRG00000028390) AKR1B1 (ENSPTRG00000019716) AKR1B10 (ENSPTRG00000019718) AKR1B15 (ENSPTRG00000041803) BPGM (ENSPTRG00000019720) ##22 CALD1 (ENSPTRG00000019721) AGBL3 (ENSPTRG00000019722) ENSPTRG00000043525 TMEM140 (ENSPTRG00000046203) CYREN (ENSPTRG00000019724) WDR91 (ENSPTRG00000019725) STRA8 (ENSPTRG00000019726) CNOT4 (ENSPTRG00000019727) ENSPTRG00000040387 NUP205 (ENSPTRG00000019728) STMP1 (ENSPTRG00000042161) SLC13A4 (ENSPTRG00000019729) FAM180A (ENSPTRG00000019731) MTPN (ENSPTRG00000019732) ENSPTRG00000047947 Human MODERN SPECIES 19 CEP41 (ENSG00000106477) MEST (ENSG00000106484) COPG2 (ENSG00000158623) TSGA13 (ENSG00000213265) KLF14 (ENSG00000266265) MKLN1 (ENSG00000128585) PODXL (ENSG00000128567) PLXNA4 (ENSG00000221866) CHCHD3 (ENSG00000106554) EXOC4 (ENSG00000131558) LRGUK (ENSG00000155530) SLC35B4 (ENSG00000205060) AKR1B1 (ENSG00000085662) AKR1B10 (ENSG00000198074) AKR1B15 (ENSG00000227471) BPGM (ENSG00000172331) ##22 CALD1 (ENSG00000122786) AGBL3 (ENSG00000146856) CYREN (ENSG00000122783) TMEM140 (ENSG00000146859) WDR91 (ENSG00000105875) STRA8 (ENSG00000146857) CNOT4 (ENSG00000080802) NUP205 (ENSG00000155561) STMP1 (ENSG00000243317) SLC13A4 (ENSG00000164707) FAM180A (ENSG00000189320) MTPN (ENSG00000105887) CHRM2 (ENSG00000181072) PTN (ENSG00000105894) DGKI (ENSG00000157680) Gorilla MODERN SPECIES 20 ENSGGOG00000043449 MKLN1 (ENSGGOG00000026878) PODXL (ENSGGOG00000000858) ENSGGOG00000025653 ENSGGOG00000042691 PLXNA4 (ENSGGOG00000007146) ENSGGOG00000037349 ENSGGOG00000042744 ENSGGOG00000041288 EXOC4 (ENSGGOG00000003951) LRGUK (ENSGGOG00000022273) SLC35B4 (ENSGGOG00000001736) AKR1B1 (ENSGGOG00000011731) AKR1B10 (ENSGGOG00000026172) ENSGGOG00000012293 BPGM (ENSGGOG00000007525) ##22 CALD1 (ENSGGOG00000009728) AGBL3 (ENSGGOG00000024585) ENSGGOG00000025238 TMEM140 (ENSGGOG00000039750) CYREN (ENSGGOG00000000896) WDR91 (ENSGGOG00000000897) STRA8 (ENSGGOG00000012953) CNOT4 (ENSGGOG00000000142) ENSGGOG00000043295 NUP205 (ENSGGOG00000011519) STMP1 (ENSGGOG00000041119) SLC13A4 (ENSGGOG00000000373) FAM180A (ENSGGOG00000034922) MTPN (ENSGGOG00000038259) CHRM2 (ENSGGOG00000036119) Orangutan MODERN SPECIES 20 TSGA13 (ENSPPYG00000037826) KLF14 (ENSPPYG00000018009) MKLN1 (ENSPPYG00000018010) PODXL (ENSPPYG00000018011) ENSPPYG00000035067 ENSPPYG00000025826 PLXNA4 (ENSPPYG00000018012) CHCHD3 (ENSPPYG00000025827) ENSPPYG00000012642 EXOC4 (ENSPPYG00000018014) ENSPPYG00000018015 SLC35B4 (ENSPPYG00000018016) AKR1B1 (ENSPPYG00000018017) AKR1B10 (ENSPPYG00000018018) AKR1B15 (ENSPPYG00000039014) BPGM (ENSPPYG00000018019) ##22 CALD1 (ENSPPYG00000018020) AGBL3 (ENSPPYG00000018021) TMEM140 (ENSPPYG00000018022) CYREN (ENSPPYG00000018023) WDR91 (ENSPPYG00000018024) STRA8 (ENSPPYG00000018025) CNOT4 (ENSPPYG00000018026) NUP205 (ENSPPYG00000018027) ENSPPYG00000037837 SLC13A4 (ENSPPYG00000018029) FAM180A (ENSPPYG00000018030) ENSPPYG00000018031 MTPN (ENSPPYG00000034093) CHRM2 (ENSPPYG00000018033) ENSPPYG00000034143 Gibbon MODERN SPECIES 3 TSGA13 (ENSNLEG00000012893) KLF14 (ENSNLEG00000018607) ENSNLEG00000018608 MKLN1 (ENSNLEG00000012902) ENSNLEG00000012939 ENSNLEG00000033979 PLXNA4 (ENSNLEG00000012960) CHCHD3 (ENSNLEG00000027609) ENSNLEG00000027210 EXOC4 (ENSNLEG00000012988) LRGUK (ENSNLEG00000012993) SLC35B4 (ENSNLEG00000031117) AKR1B1 (ENSNLEG00000013037) ENSNLEG00000028014 ENSNLEG00000013088 BPGM (ENSNLEG00000013099) ##22 CALD1 (ENSNLEG00000013110) AGBL3 (ENSNLEG00000013163) ENSNLEG00000031154 CYREN (ENSNLEG00000013225) WDR91 (ENSNLEG00000013246) ENSNLEG00000013340 CNOT4 (ENSNLEG00000013352) ENSNLEG00000018611 NUP205 (ENSNLEG00000013422) STMP1 (ENSNLEG00000036220) SLC13A4 (ENSNLEG00000013581) FAM180A (ENSNLEG00000013609) ENSNLEG00000018612 MTPN (ENSNLEG00000013619) ENSNLEG00000035281 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00390000010721.a.a.a.a.c.a.d ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00910000147194 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000164182.b ENSGT00940000164182.a.a ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a ENSGT00940000158940 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2942 ENSRROG00000039866 ##22 Golden snub-nosed monkey MODERN SPECIES 3199 ENSRROG00000037701 SEC61B (ENSRROG00000040905) ALG2 (ENSRROG00000031829) TGFBR1 (ENSRROG00000036066) COL15A1 (ENSRROG00000033420) GALNT12 (ENSRROG00000028986) ANKS6 (ENSRROG00000015774) GABBR2 (ENSRROG00000032552) ENSRROG00000038904 TBC1D2 (ENSRROG00000027761) ENSRROG00000028788 ##22 CORO2A (ENSRROG00000045318) TRIM14 (ENSRROG00000030693) NANS (ENSRROG00000035464) ANP32B (ENSRROG00000036314) HEMGN (ENSRROG00000043724) TRMO (ENSRROG00000032341) XPA (ENSRROG00000029946) NCBP1 (ENSRROG00000029767) ENSRROG00000030745 TSTD2 (ENSRROG00000002210) TMOD1 (ENSRROG00000033478) ENSRROG00000008448 TDRD7 (ENSRROG00000035804) CCDC180 (ENSRROG00000041113) Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00510000047602.q.a ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000010721.a.a.a.a.c.a.d ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00910000147194 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.q.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a ENSGT00940000158940 Vervet Monkey MODERN SPECIES 13 TSGA13 (ENSCSAG00000009670) KLF14 (ENSCSAG00000019140) ENSCSAG00000019141 MKLN1 (ENSCSAG00000009653) PODXL (ENSCSAG00000009644) PLXNA4 (ENSCSAG00000009586) ENSCSAG00000009444 EXOC4 (ENSCSAG00000009437) ENSCSAG00000019142 LRGUK (ENSCSAG00000009415) SLC35B4 (ENSCSAG00000009376) AKR1B1 (ENSCSAG00000009365) ENSCSAG00000009355 ENSCSAG00000009332 ENSCSAG00000009264 BPGM (ENSCSAG00000009197) ##22 CALD1 (ENSCSAG00000009190) AGBL3 (ENSCSAG00000009168) ENSCSAG00000019143 TMEM140 (ENSCSAG00000019144) CYREN (ENSCSAG00000009149) WDR91 (ENSCSAG00000009140) STRA8 (ENSCSAG00000009120) CNOT4 (ENSCSAG00000009096) NUP205 (ENSCSAG00000009080) SLC13A4 (ENSCSAG00000009009) FAM180A (ENSCSAG00000008904) MTPN (ENSCSAG00000008898) ENSCSAG00000019145 ENSCSAG00000019146 CHRM2 (ENSCSAG00000019147) Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000010721.a.a.a.a.c.a.d ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00910000147194 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.r.b ENSGT00940000154773.q.b ENSGT00950000182926.a ##22 ENSGT00910000148215 ENSGT00940000153901.a.a ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 Macaca ANCESTRAL SPECIES 3 ENSGT00390000002222 ENSGT00510000047602.q.a.c ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000010721.a.a.a.a.c.a.d ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.q.b ENSGT00950000182926.a ##22 ENSGT00910000148215 ENSGT00940000153901.a.a ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602.q.a.c ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.q.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.a.a.b.b.a ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Rhesus MODERN SPECIES 13 CEP41 (ENSMMUG00000009496) MEST (ENSMMUG00000009499) COPG2 (ENSMMUG00000004801) TSGA13 (ENSMMUG00000004803) KLF14 (ENSMMUG00000012491) ENSMMUG00000063335 MKLN1 (ENSMMUG00000018259) PODXL (ENSMMUG00000018260) PLXNA4 (ENSMMUG00000005127) CHCHD3 (ENSMMUG00000001671) EXOC4 (ENSMMUG00000040076) LRGUK (ENSMMUG00000000915) SLC35B4 (ENSMMUG00000000916) AKR1B1 (ENSMMUG00000000917) AKR1B10 (ENSMMUG00000013098) BPGM (ENSMMUG00000004598) ##22 CALD1 (ENSMMUG00000006527) AGBL3 (ENSMMUG00000006530) ENSMMUG00000062419 TMEM140 (ENSMMUG00000062554) CYREN (ENSMMUG00000039133) WDR91 (ENSMMUG00000002317) STRA8 (ENSMMUG00000002318) CNOT4 (ENSMMUG00000016181) NUP205 (ENSMMUG00000016384) ENSMMUG00000064014 STMP1 (ENSMMUG00000043412) SLC13A4 (ENSMMUG00000016386) FAM180A (ENSMMUG00000062033) MTPN (ENSMMUG00000017108) CHRM2 (ENSMMUG00000054019) Pig-tailed macaque MODERN SPECIES 479 MKLN1 (ENSMNEG00000003468) PODXL (ENSMNEG00000031894) ENSMNEG00000026582 PLXNA4 (ENSMNEG00000039422) ENSMNEG00000041898 EXOC4 (ENSMNEG00000041325) ENSMNEG00000043244 LRGUK (ENSMNEG00000044123) ENSMNEG00000035577 SLC35B4 (ENSMNEG00000043258) AKR1B1 (ENSMNEG00000030878) ENSMNEG00000028677 ENSMNEG00000033249 ENSMNEG00000037295 ENSMNEG00000019874 BPGM (ENSMNEG00000033622) ##22 ENSMNEG00000037794 CALD1 (ENSMNEG00000029547) ENSMNEG00000030428 AGBL3 (ENSMNEG00000043627) ENSMNEG00000030877 CYREN (ENSMNEG00000034913) WDR91 (ENSMNEG00000033355) STRA8 (ENSMNEG00000029267) CNOT4 (ENSMNEG00000042164) NUP205 (ENSMNEG00000044578) STMP1 (ENSMNEG00000035136) SLC13A4 (ENSMNEG00000036754) FAM180A (ENSMNEG00000030484) MTPN (ENSMNEG00000045193) CHRM2 (ENSMNEG00000004416) Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000163415 ENSGT00390000010721.a.a.a.a.c.a.d ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00910000147194 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a ENSGT00940000154773.r.b ENSGT00940000164182.b ENSGT00940000164182.a.a.a.a ENSGT00940000154773.r.a ENSGT00950000182926.a ##22 ENSGT00910000148215 ENSGT00940000153901.a.a ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a Olive baboon MODERN SPECIES 14 MEST (ENSPANG00000018190) COPG2 (ENSPANG00000005538) TSGA13 (ENSPANG00000015020) KLF14 (ENSPANG00000015615) ENSPANG00000043728 MKLN1 (ENSPANG00000000794) ENSPANG00000025223 PLXNA4 (ENSPANG00000005828) ENSPANG00000035889 ENSPANG00000051189 EXOC4 (ENSPANG00000015019) LRGUK (ENSPANG00000011214) SLC35B4 (ENSPANG00000010324) ENSPANG00000046958 ENSPANG00000044707 BPGM (ENSPANG00000006917) ##22 CALD1 (ENSPANG00000021640) AGBL3 (ENSPANG00000010207) CYREN (ENSPANG00000036983) WDR91 (ENSPANG00000022489) STRA8 (ENSPANG00000022490) CNOT4 (ENSPANG00000017724) NUP205 (ENSPANG00000012989) STMP1 (ENSPANG00000045737) SLC13A4 (ENSPANG00000023480) FAM180A (ENSPANG00000020315) ENSPANG00000026204 MTPN (ENSPANG00000010075) ENSPANG00000047820 ENSPANG00000048827 CHRM2 (ENSPANG00000011312) Cercopithecinae_d ANCESTRAL SPECIES 25 ENSGT00940000154773.q.b ENSGT00940000164182.a.a.a.a ENSGT00940000154773.r.a ENSGT00950000182926.a ##22 ENSGT00910000148215 ENSGT00940000153901.a.a ENSGT00940000154507.g.a ENSGT00940000160916 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT01020000230346.C.c.a.a.a.a ENSGT00940000158940 Drill MODERN SPECIES 320 BPGM (ENSMLEG00000036209) ##22 CALD1 (ENSMLEG00000008257) ENSMLEG00000038321 AGBL3 (ENSMLEG00000031423) CYREN (ENSMLEG00000008942) WDR91 (ENSMLEG00000017378) STRA8 (ENSMLEG00000037626) Sooty mangabey MODERN SPECIES 148 ENSCATG00000028631 ENSCATG00000033377 ENSCATG00000040571 ENSCATG00000031856 ENSCATG00000014043 BPGM (ENSCATG00000030674) ##22 ENSCATG00000029471 CALD1 (ENSCATG00000037074) AGBL3 (ENSCATG00000042873) ENSCATG00000022237 ENSCATG00000026597 CYREN (ENSCATG00000034772) WDR91 (ENSCATG00000038018) STRA8 (ENSCATG00000032354) CNOT4 (ENSCATG00000022607) NUP205 (ENSCATG00000030033) STMP1 (ENSCATG00000012047) SLC13A4 (ENSCATG00000042011) FAM180A (ENSCATG00000026812) MTPN (ENSCATG00000031920) ENSCATG00000041456 Platyrrhini ANCESTRAL SPECIES 10 ENSGT00940000158082.b ENSGT00390000002222.m ENSGT00510000047602.o ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a.d ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00470000042642 ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Cebidae ANCESTRAL SPECIES 9 ENSGT00390000002222.m ENSGT00510000047602.o ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000007640.a.f ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a.d ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 ENSGT00430000031071 ENSGT00940000158940 Marmoset MODERN SPECIES 20 ENSCJAG00000082943 ENSCJAG00000072146 MKLN1 (ENSCJAG00000016384) ENSCJAG00000016372 PLXNA4 (ENSCJAG00000000260) ENSCJAG00000073932 CHCHD3 (ENSCJAG00000035792) ENSCJAG00000053184 ENSCJAG00000069892 EXOC4 (ENSCJAG00000012082) LRGUK (ENSCJAG00000012164) SLC35B4 (ENSCJAG00000012197) ENSCJAG00000022803 ENSCJAG00000012231 AKR1B10 (ENSCJAG00000012250) BPGM (ENSCJAG00000012283) ##22 ENSCJAG00000071798 CALD1 (ENSCJAG00000012295) ENSCJAG00000022780 AGBL3 (ENSCJAG00000012370) TMEM140 (ENSCJAG00000048255) CYREN (ENSCJAG00000012428) WDR91 (ENSCJAG00000012439) ENSCJAG00000069994 ENSCJAG00000068017 STRA8 (ENSCJAG00000012515) CNOT4 (ENSCJAG00000012532) NUP205 (ENSCJAG00000012599) STMP1 (ENSCJAG00000071818) SLC13A4 (ENSCJAG00000012731) FAM180A (ENSCJAG00000044004) Cebidae_a ANCESTRAL SPECIES 7 ENSGT00390000002222.m ENSGT00510000047602.o ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000007640.a.f ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a.f.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.o.a.d.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00690000103950 ENSGT00470000042642 ENSGT00430000031071 Capuchin MODERN SPECIES 77 TSGA13 (ENSCCAG00000026053) ENSCCAG00000036327 ENSCCAG00000004671 ENSCCAG00000035079 MKLN1 (ENSCCAG00000002300) PODXL (ENSCCAG00000029273) ENSCCAG00000030892 PLXNA4 (ENSCCAG00000035293) ENSCCAG00000037421 CHCHD3 (ENSCCAG00000022426) EXOC4 (ENSCCAG00000029183) LRGUK (ENSCCAG00000023787) SLC35B4 (ENSCCAG00000038022) ENSCCAG00000023461 AKR1B10 (ENSCCAG00000028870) BPGM (ENSCCAG00000037363) ##22 CALD1 (ENSCCAG00000023344) AGBL3 (ENSCCAG00000028348) CYREN (ENSCCAG00000029063) WDR91 (ENSCCAG00000030841) STRA8 (ENSCCAG00000036369) CNOT4 (ENSCCAG00000024414) NUP205 (ENSCCAG00000025225) STMP1 (ENSCCAG00000032908) SLC13A4 (ENSCCAG00000034333) FAM180A (ENSCCAG00000008630) ENSCCAG00000016744 ENSCCAG00000023669 MTPN (ENSCCAG00000027301) Bolivian squirrel monkey MODERN SPECIES 44 ENSSBOG00000027781 COPG2 (ENSSBOG00000031750) TSGA13 (ENSSBOG00000026243) KLF14 (ENSSBOG00000005892) ENSSBOG00000031877 ENSSBOG00000034397 MKLN1 (ENSSBOG00000033694) PODXL (ENSSBOG00000036080) PLXNA4 (ENSSBOG00000021720) CHCHD3 (ENSSBOG00000023082) EXOC4 (ENSSBOG00000029338) LRGUK (ENSSBOG00000026439) SLC35B4 (ENSSBOG00000021634) ENSSBOG00000032642 AKR1B10 (ENSSBOG00000029013) BPGM (ENSSBOG00000012638) ##22 CALD1 (ENSSBOG00000019974) AGBL3 (ENSSBOG00000003499) CYREN (ENSSBOG00000028875) WDR91 (ENSSBOG00000035597) STRA8 (ENSSBOG00000033188) ENSSBOG00000025530 CNOT4 (ENSSBOG00000020808) NUP205 (ENSSBOG00000034990) STMP1 (ENSSBOG00000022931) SLC13A4 (ENSSBOG00000023042) FAM180A (ENSSBOG00000020108) ENSSBOG00000020941 MTPN (ENSSBOG00000020347) Mas night monkey MODERN SPECIES 302 SLC35B4 (ENSANAG00000027792) ENSANAG00000024744 AKR1B10 (ENSANAG00000019135) BPGM (ENSANAG00000023967) ##22 CALD1 (ENSANAG00000027565) AGBL3 (ENSANAG00000032622) ENSANAG00000026068 ENSANAG00000031977 WDR91 (ENSANAG00000017832) STRA8 (ENSANAG00000024290) CNOT4 (ENSANAG00000032156) NUP205 (ENSANAG00000025427) STMP1 (ENSANAG00000020897) SLC13A4 (ENSANAG00000019748) FAM180A (ENSANAG00000024774) MTPN (ENSANAG00000013091) ENSANAG00000012570 CHRM2 (ENSANAG00000020304) PTN (ENSANAG00000031641) Tarsier MODERN SPECIES 7084 BPGM (ENSTSYG00000001576) ##22 RBPMS2 (ENSTSYG00000008996) PIF1 (ENSTSYG00000000203) PLEKHO2 (ENSTSYG00000013497) ANKDD1A (ENSTSYG00000009597) ENSTSYG00000002983 ENSTSYG00000034323 Euarchontoglires_A ANCESTRAL SPECIES 17 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 Glires ANCESTRAL SPECIES 18 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 Rodentia ANCESTRAL SPECIES 12 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Rodentia_B ANCESTRAL SPECIES 9 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000164182 ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Myomorpha ANCESTRAL SPECIES 8 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Muroidea ANCESTRAL SPECIES 8 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Cricetidae ANCESTRAL SPECIES 3 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.e ENSGT00940000154773.g.b.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00960000191636 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Cricetinae ANCESTRAL SPECIES 23 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.e ENSGT00940000154773.g.b.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 Golden Hamster MODERN SPECIES 743 Chchd3 (ENSMAUG00000014368) Exoc4 (ENSMAUG00000006900) ENSMAUG00000011914 Slc35b4 (ENSMAUG00000000568) Akr1b3 (ENSMAUG00000009279) Akr1b8 (ENSMAUG00000011894) ENSMAUG00000018773 Bpgm (ENSMAUG00000012021) ##22 Cald1 (ENSMAUG00000017213) ENSMAUG00000002354 Tmem140 (ENSMAUG00000006821) Cyren (ENSMAUG00000012355) Wdr91 (ENSMAUG00000021662) Stra8 (ENSMAUG00000001786) Slc23a4 (ENSMAUG00000019314) Cnot4 (ENSMAUG00000020415) Nup205 (ENSMAUG00000021260) Slc13a4 (ENSMAUG00000018591) Fam180a (ENSMAUG00000020364) ENSMAUG00000018385 Chrm2 (ENSMAUG00000003440) Ptn (ENSMAUG00000009417) Dgki (ENSMAUG00000010418) Chinese hamster chok1gshd MODERN SPECIES 54 Mest (ENSCGRG00001015777) Tsga13 (ENSCGRG00001014622) Klf14 (ENSCGRG00001004533) Mkln1 (ENSCGRG00001018545) Podxl (ENSCGRG00001023997) Plxna4 (ENSCGRG00001000386) ENSCGRG00001012129 Chchd3 (ENSCGRG00001024181) Exoc4 (ENSCGRG00001015281) ENSCGRG00001023326 Slc35b4 (ENSCGRG00001007188) Akr1b3 (ENSCGRG00001022690) AKR1B8 (ENSCGRG00001018111) ENSCGRG00001020786 ENSCGRG00001011866 Bpgm (ENSCGRG00001013509) ##22 ENSCGRG00001005545 Cald1 (ENSCGRG00001011190) Agbl3 (ENSCGRG00001001010) Tmem140 (ENSCGRG00001003276) Cyren (ENSCGRG00001018489) Wdr91 (ENSCGRG00001021871) Stra8 (ENSCGRG00001011632) Slc23a4 (ENSCGRG00001022511) Cnot4 (ENSCGRG00001014651) Nup205 (ENSCGRG00001015399) Slc13a4 (ENSCGRG00001024572) Fam180a (ENSCGRG00001024856) Mtpn (ENSCGRG00001005201) Chrm2 (ENSCGRG00001011552) Ptn (ENSCGRG00001015713) Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00390000009822 ENSGT00940000163415 ENSGT00910000148027 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.f ENSGT00940000154773.g.b.a.e ENSGT00940000154773.g.b.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00930000153037 ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00960000191636 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Prairie vole MODERN SPECIES 87 Tsga13 (ENSMOCG00000004959) ENSMOCG00000006808 Mkln1 (ENSMOCG00000021849) Podxl (ENSMOCG00000020551) Plxna4 (ENSMOCG00000020783) Chchd3 (ENSMOCG00000021584) Exoc4 (ENSMOCG00000014511) ENSMOCG00000022036 Slc35b4 (ENSMOCG00000022925) Akr1b3 (ENSMOCG00000000854) Akr1b8 (ENSMOCG00000019890) ENSMOCG00000014998 ENSMOCG00000022792 ENSMOCG00000022953 ENSMOCG00000014913 Bpgm (ENSMOCG00000015198) ##22 Cald1 (ENSMOCG00000018707) ENSMOCG00000012743 ENSMOCG00000005552 Tmem140 (ENSMOCG00000015906) Cyren (ENSMOCG00000019314) Wdr91 (ENSMOCG00000005713) Stra8 (ENSMOCG00000000877) Slc23a4 (ENSMOCG00000023017) Cnot4 (ENSMOCG00000020955) Nup205 (ENSMOCG00000010190) Slc13a4 (ENSMOCG00000020225) Fam180a (ENSMOCG00000021181) Mtpn (ENSMOCG00000003653) Chrm2 (ENSMOCG00000007177) Ptn (ENSMOCG00000015868) Northern American deer mouse MODERN SPECIES 16 Mkln1 (ENSPEMG00000021687) Podxl (ENSPEMG00000021683) ENSPEMG00000012519 Plxna4 (ENSPEMG00000020048) ENSPEMG00000025169 Chchd3 (ENSPEMG00000028360) Exoc4 (ENSPEMG00000022440) ENSPEMG00000026329 ENSPEMG00000021856 Slc35b4 (ENSPEMG00000029193) Akr1b3 (ENSPEMG00000022346) Akr1b8 (ENSPEMG00000022381) ENSPEMG00000026233 ENSPEMG00000030943 ENSPEMG00000023797 Bpgm (ENSPEMG00000023872) ##22 Cald1 (ENSPEMG00000022090) ENSPEMG00000025448 Agbl3 (ENSPEMG00000027578) Tmem140 (ENSPEMG00000026375) Cyren (ENSPEMG00000026159) Wdr91 (ENSPEMG00000000189) Stra8 (ENSPEMG00000022620) Slc23a4 (ENSPEMG00000022648) Cnot4 (ENSPEMG00000021566) Nup205 (ENSPEMG00000022331) ENSPEMG00000025229 Slc13a4 (ENSPEMG00000022474) Fam180a (ENSPEMG00000025735) Mtpn (ENSPEMG00000025160) Chrm2 (ENSPEMG00000024536) Murinae ANCESTRAL SPECIES 4 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00520000061195 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.w ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.c ENSGT00940000154773.g.b.a.d ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Mus ANCESTRAL SPECIES 20 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00520000061195 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.w ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.c ENSGT00940000154773.g.b.a.d ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Mus_A ANCESTRAL SPECIES 7 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00520000061195 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.w ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.c ENSGT00940000154773.g.b.a.d ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Mus_B ANCESTRAL SPECIES 20 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00520000061195 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.w ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.c ENSGT00940000154773.g.b.a.d ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Mus_C ANCESTRAL SPECIES 19 ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT00520000061195 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.w ENSGT00940000154773.g.b.a.c ENSGT00940000153272.a.b.x.b.a ENSGT00940000154773.g.a ENSGT00940000154773.g.b.a.d ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00960000191636 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Steppe mouse MODERN SPECIES 3353 Exoc4 (ENSMSIG00000029076) Lrguk (ENSMSIG00000029116) Slc35b4 (ENSMSIG00000029129) ENSMSIG00000029134 Akr1b10 (ENSMSIG00000029138) Bpgm (ENSMSIG00000029179) ##22 Cald1 (ENSMSIG00000029186) Agbl3 (ENSMSIG00000029214) Tmem140 (ENSMSIG00000029241) Cyren (ENSMSIG00000029246) Wdr91 (ENSMSIG00000029257) Stra8 (ENSMSIG00000029267) Slc23a4 (ENSMSIG00000029274) Cnot4 (ENSMSIG00000029285) Nup205 (ENSMSIG00000029322) ENSMSIG00000029362 ENSMSIG00000029363 Slc13a4 (ENSMSIG00000029367) Fam180a (ENSMSIG00000029373) Mtpn (ENSMSIG00000029374) ENSMSIG00000029379 spretus MODERN SPECIES 15 Copg2 (MGP_SPRETEiJ_G0029193) Tsga13 (MGP_SPRETEiJ_G0029194) Klf14 (MGP_SPRETEiJ_G0029195) Mkln1 (MGP_SPRETEiJ_G0029196) Podxl (MGP_SPRETEiJ_G0029197) 1700012A03Rik (MGP_SPRETEiJ_G0029198) Plxna4 (MGP_SPRETEiJ_G0029199) Chchd3 (MGP_SPRETEiJ_G0029200) Exoc4 (MGP_SPRETEiJ_G0029201) MGP_SPRETEiJ_G0029202 Slc35b4 (MGP_SPRETEiJ_G0029203) MGP_SPRETEiJ_G0029204 MGP_SPRETEiJ_G0029205 MGP_SPRETEiJ_G0029206 Akr1b7 (MGP_SPRETEiJ_G0029207) Bpgm (MGP_SPRETEiJ_G0029208) ##22 MGP_SPRETEiJ_G0029209 Agbl3 (MGP_SPRETEiJ_G0029210) Tmem140 (MGP_SPRETEiJ_G0029211) Cyren (MGP_SPRETEiJ_G0029212) Wdr91 (MGP_SPRETEiJ_G0029213) Stra8 (MGP_SPRETEiJ_G0029214) Slc23a4 (MGP_SPRETEiJ_G0029215) Cnot4 (MGP_SPRETEiJ_G0029216) Nup205 (MGP_SPRETEiJ_G0029217) Slc13a4 (MGP_SPRETEiJ_G0029218) Fam180a (MGP_SPRETEiJ_G0029219) Mtpn (MGP_SPRETEiJ_G0029220) Chrm2 (MGP_SPRETEiJ_G0029221) Ptn (MGP_SPRETEiJ_G0029222) Dgki (MGP_SPRETEiJ_G0029223) Mouse MODERN SPECIES 15 Copg2 (ENSMUSG00000025607) Tsga13 (ENSMUSG00000039032) Klf14 (ENSMUSG00000073209) Mkln1 (ENSMUSG00000025609) Podxl (ENSMUSG00000025608) 1700012A03Rik (ENSMUSG00000029766) Plxna4 (ENSMUSG00000029765) Chchd3 (ENSMUSG00000053768) Exoc4 (ENSMUSG00000029763) Lrguk (ENSMUSG00000056215) Slc35b4 (ENSMUSG00000018999) Akr1b3 (ENSMUSG00000001642) Akr1b8 (ENSMUSG00000029762) Akr1b10 (ENSMUSG00000061758) Akr1b7 (ENSMUSG00000052131) Bpgm (ENSMUSG00000038871) ##22 Cald1 (ENSMUSG00000029761) Agbl3 (ENSMUSG00000038836) Tmem140 (ENSMUSG00000057137) Cyren (ENSMUSG00000046806) Wdr91 (ENSMUSG00000058486) Stra8 (ENSMUSG00000029848) Slc23a4 (ENSMUSG00000029847) Cnot4 (ENSMUSG00000038784) Nup205 (ENSMUSG00000038759) Stmp1 (ENSMUSG00000073155) Slc13a4 (ENSMUSG00000029843) Fam180a (ENSMUSG00000047420) Mtpn (ENSMUSG00000029840) Chrm2 (ENSMUSG00000045613) Ptn (ENSMUSG00000029838) Ryukyu mouse MODERN SPECIES 15 Tsga13 (MGP_CAROLIEiJ_G0028194) Klf14 (MGP_CAROLIEiJ_G0028195) Mkln1 (MGP_CAROLIEiJ_G0028196) Podxl (MGP_CAROLIEiJ_G0028197) 1700012A03Rik (MGP_CAROLIEiJ_G0028198) Plxna4 (MGP_CAROLIEiJ_G0028199) Chchd3 (MGP_CAROLIEiJ_G0028200) Exoc4 (MGP_CAROLIEiJ_G0028201) MGP_CAROLIEiJ_G0028202 Slc35b4 (MGP_CAROLIEiJ_G0028203) Akr1b3 (MGP_CAROLIEiJ_G0028204) Akr1b8 (MGP_CAROLIEiJ_G0028205) MGP_CAROLIEiJ_G0028206 MGP_CAROLIEiJ_G0028207 Akr1b7 (MGP_CAROLIEiJ_G0028208) Bpgm (MGP_CAROLIEiJ_G0028209) ##22 Cald1 (MGP_CAROLIEiJ_G0028210) Agbl3 (MGP_CAROLIEiJ_G0028211) Tmem140 (MGP_CAROLIEiJ_G0028212) Cyren (MGP_CAROLIEiJ_G0028213) Wdr91 (MGP_CAROLIEiJ_G0028214) Stra8 (MGP_CAROLIEiJ_G0028215) Slc23a4 (MGP_CAROLIEiJ_G0028216) Cnot4 (MGP_CAROLIEiJ_G0028217) Nup205 (MGP_CAROLIEiJ_G0028218) Slc13a4 (MGP_CAROLIEiJ_G0028219) Fam180a (MGP_CAROLIEiJ_G0028220) Mtpn (MGP_CAROLIEiJ_G0028221) Chrm2 (MGP_CAROLIEiJ_G0028222) Ptn (MGP_CAROLIEiJ_G0028223) Dgki (MGP_CAROLIEiJ_G0028224) Shrew mouse MODERN SPECIES 11 Copg2 (MGP_PahariEiJ_G0021951) Tsga13 (MGP_PahariEiJ_G0021952) Klf14 (MGP_PahariEiJ_G0021953) Mkln1 (MGP_PahariEiJ_G0021954) Podxl (MGP_PahariEiJ_G0021955) MGP_PahariEiJ_G0021956 Plxna4 (MGP_PahariEiJ_G0021957) Chchd3 (MGP_PahariEiJ_G0021958) Exoc4 (MGP_PahariEiJ_G0021959) MGP_PahariEiJ_G0021960 Slc35b4 (MGP_PahariEiJ_G0021961) Akr1b3 (MGP_PahariEiJ_G0021962) Akr1b8 (MGP_PahariEiJ_G0021963) MGP_PahariEiJ_G0021964 Akr1b7 (MGP_PahariEiJ_G0021965) Bpgm (MGP_PahariEiJ_G0021966) ##22 Cald1 (MGP_PahariEiJ_G0021967) Agbl3 (MGP_PahariEiJ_G0021968) Tmem140 (MGP_PahariEiJ_G0021969) MGP_PahariEiJ_G0021970 Wdr91 (MGP_PahariEiJ_G0021971) Stra8 (MGP_PahariEiJ_G0021972) Slc23a4 (MGP_PahariEiJ_G0021973) Cnot4 (MGP_PahariEiJ_G0021974) Nup205 (MGP_PahariEiJ_G0021975) Slc13a4 (MGP_PahariEiJ_G0021976) Fam180a (MGP_PahariEiJ_G0021977) Mtpn (MGP_PahariEiJ_G0021978) Chrm2 (MGP_PahariEiJ_G0021979) Ptn (MGP_PahariEiJ_G0021980) Dgki (MGP_PahariEiJ_G0021981) Rat MODERN SPECIES 14 Klf14 (ENSRNOG00000027557) Mkln1 (ENSRNOG00000054514) Podxl (ENSRNOG00000012495) AABR07060145.1 (ENSRNOG00000032847) LOC689042 (ENSRNOG00000027055) Plxna4 (ENSRNOG00000013072) Chchd3 (ENSRNOG00000013211) Exoc4 (ENSRNOG00000046023) Lrguk (ENSRNOG00000008775) Slc35b4 (ENSRNOG00000008851) ENSRNOG00000070521 Akr1b1 (ENSRNOG00000009513) Akr1b10 (ENSRNOG00000027433) Akr1b8 (ENSRNOG00000009734) Akr1b7 (ENSRNOG00000009875) Bpgm (ENSRNOG00000010133) ##22 Cald1 (ENSRNOG00000010233) Agbl3 (ENSRNOG00000010397) Tmem140 (ENSRNOG00000026965) Cyren (ENSRNOG00000026958) Wdr91 (ENSRNOG00000010421) Stra8 (ENSRNOG00000010573) RGD1565367 (ENSRNOG00000026919) Cnot4 (ENSRNOG00000010795) Nup205 (ENSRNOG00000010852) Slc13a4 (ENSRNOG00000011184) Fam180a (ENSRNOG00000011750) ENSRNOG00000069559 Mtpn (ENSRNOG00000011857) Chrm2 (ENSRNOG00000046972) Ptn (ENSRNOG00000011946) Upper Galilee mountains blind mole rat MODERN SPECIES 1840 ENSNGAG00000013275 ENSNGAG00000010855 Bpgm (ENSNGAG00000018030) ##22 ENSNGAG00000001111 Cald1 (ENSNGAG00000011387) ENSNGAG00000012095 Tmem140 (ENSNGAG00000000523) Cyren (ENSNGAG00000007088) ENSNGAG00000014034 Stra8 (ENSNGAG00000015135) Slc23a4 (ENSNGAG00000010060) Cnot4 (ENSNGAG00000015030) Nup205 (ENSNGAG00000016680) Slc13a4 (ENSNGAG00000019669) Fam180a (ENSNGAG00000017592) ENSNGAG00000016392 Chrm2 (ENSNGAG00000015929) Ptn (ENSNGAG00000020362) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 81 Ssmem1 (ENSJJAG00000023921) Cpa4 (ENSJJAG00000000289) Cep41 (ENSJJAG00000017848) Klf14 (ENSJJAG00000022216) ENSJJAG00000020373 ENSJJAG00000017895 ENSJJAG00000012178 Plxna4 (ENSJJAG00000003212) Chchd3 (ENSJJAG00000018487) Exoc4 (ENSJJAG00000012752) ENSJJAG00000010622 Akr1b3 (ENSJJAG00000023402) ENSJJAG00000018762 ENSJJAG00000009456 ENSJJAG00000004568 ENSJJAG00000004506 ##22 Cald1 (ENSJJAG00000020901) ENSJJAG00000016972 Stra8 (ENSJJAG00000021267) Slc23a4 (ENSJJAG00000019115) Cnot4 (ENSJJAG00000016618) Nup205 (ENSJJAG00000015419) Chrm2 (ENSJJAG00000001954) Dgki (ENSJJAG00000015713) Creb3l2 (ENSJJAG00000021391) Akr1d1 (ENSJJAG00000023178) ENSJJAG00000022841 ENSJJAG00000021534 Svopl (ENSJJAG00000016350) Zc3hav1 (ENSJJAG00000016894) Ttc26 (ENSJJAG00000017971) Lesser Egyptian jerboa MODERN SPECIES 202 Ptpn14 (ENSJJAG00000018171) Smyd2 (ENSJJAG00000016418) Prox1 (ENSJJAG00000014483) Rps6kc1 (ENSJJAG00000012880) Angel2 (ENSJJAG00000011228) Vash2 (ENSJJAG00000010725) Flvcr1 (ENSJJAG00000008943) Tatdn3 (ENSJJAG00000019566) Nsl1 (ENSJJAG00000018765) Batf3 (ENSJJAG00000018647) Garin4 (ENSJJAG00000018541) Atf3 (ENSJJAG00000017443) Nenf (ENSJJAG00000017183) Pacc1 (ENSJJAG00000016674) Ppp2r5a (ENSJJAG00000000086) ENSJJAG00000011922 ##22 Dtl (ENSJJAG00000018467) Ints7 (ENSJJAG00000016411) Lpgat1 (ENSJJAG00000015813) Nek2 (ENSJJAG00000013121) Lesser Egyptian jerboa MODERN SPECIES 83 Angpt1 (ENSJJAG00000012998) ENSJJAG00000010049 Rspo2 (ENSJJAG00000007430) Eif3e (ENSJJAG00000005084) Emc2 (ENSJJAG00000022097) Trhr (ENSJJAG00000020928) ENSJJAG00000020798 Nudcd1 (ENSJJAG00000017022) ENSJJAG00000016511 Pkhd1l1 (ENSJJAG00000013395) Ebag9 (ENSJJAG00000000164) Sybu (ENSJJAG00000017887) Kcnv1 (ENSJJAG00000017352) ENSJJAG00000016761 ENSJJAG00000014375 ##22 Csmd3 (ENSJJAG00000020031) ENSJJAG00000009239 Trps1 (ENSJJAG00000021617) Eif3h (ENSJJAG00000016399) ENSJJAG00000012545 ENSJJAG00000009880 Rad21 (ENSJJAG00000009491) ENSJJAG00000004609 ENSJJAG00000001121 Slc30a8 (ENSJJAG00000022484) Med30 (ENSJJAG00000022063) ENSJJAG00000019753 ENSJJAG00000009708 Samd12 (ENSJJAG00000007485) Tnfrsf11b (ENSJJAG00000019893) Kangaroo rat MODERN SPECIES 375 Mkln1 (ENSDORG00000000468) ENSDORG00000026223 Plxna4 (ENSDORG00000006103) ENSDORG00000024085 Chchd3 (ENSDORG00000005881) Exoc4 (ENSDORG00000001201) ENSDORG00000016100 Slc35b4 (ENSDORG00000006340) Akr1b3 (ENSDORG00000011676) ENSDORG00000003698 ENSDORG00000012087 Bpgm (ENSDORG00000013501) ##22 Cald1 (ENSDORG00000016685) ENSDORG00000027778 ENSDORG00000023478 Cyren (ENSDORG00000000570) ENSDORG00000000571 Stra8 (ENSDORG00000000574) Slc23a4 (ENSDORG00000026494) Cnot4 (ENSDORG00000012268) Nup205 (ENSDORG00000004978) Slc13a4 (ENSDORG00000004612) Fam180a (ENSDORG00000004615) Mtpn (ENSDORG00000028623) Chrm2 (ENSDORG00000006528) Ptn (ENSDORG00000006102) Dgki (ENSDORG00000006104) Rodentia_A ANCESTRAL SPECIES 12 ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT01100000267096 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Sciuridae ANCESTRAL SPECIES 7 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602.k ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 CEP41 (ENSSVLG00005022733) ENSSVLG00005022381 COPG2 (ENSSVLG00005022308) TSGA13 (ENSSVLG00005022257) KLF14 (ENSSVLG00005022237) ENSSVLG00005021922 PLXNA4 (ENSSVLG00005021598) CHCHD3 (ENSSVLG00005021522) EXOC4 (ENSSVLG00005021457) LRGUK (ENSSVLG00005021134) SLC35B4 (ENSSVLG00005021054) ENSSVLG00005020951 ENSSVLG00005020910 AKR1B10 (ENSSVLG00005020801) ENSSVLG00005020785 ENSSVLG00005020758 ##22 CALD1 (ENSSVLG00005020365) AGBL3 (ENSSVLG00005019980) ENSSVLG00005019848 ENSSVLG00005019779 WDR91 (ENSSVLG00005019635) STRA8 (ENSSVLG00005019507) ENSSVLG00005019349 ENSSVLG00005019286 CNOT4 (ENSSVLG00005019157) NUP205 (ENSSVLG00005019057) STMP1 (ENSSVLG00005019025) SLC13A4 (ENSSVLG00005018865) FAM180A (ENSSVLG00005018803) MTPN (ENSSVLG00005018736) CHRM2 (ENSSVLG00005018715) Eurasian red squirrel MODERN SPECIES 15 ITGA1 (ENSSVLG00005009298) ITGA2 (ENSSVLG00005009124) MOCS2 (ENSSVLG00005009062) FST (ENSSVLG00005008975) ENSSVLG00005008918 ENSSVLG00005008898 ARL15 (ENSSVLG00005008865) HSPB3 (ENSSVLG00005008839) ENSSVLG00005008821 ENSSVLG00005008805 ESM1 (ENSSVLG00005008786) GZMK (ENSSVLG00005008745) GZMA (ENSSVLG00005008704) GPX8 (ENSSVLG00005008660) CDC20B (ENSSVLG00005008464) ENSSVLG00005008427 ##22 MCIDAS (ENSSVLG00005008380) CCNO (ENSSVLG00005008344) DHX29 (ENSSVLG00005008305) MTREX (ENSSVLG00005008234) PLPP1 (ENSSVLG00005008180) SLC38A9 (ENSSVLG00005007887) DDX4 (ENSSVLG00005007457) ENSSVLG00005007344 ENSSVLG00005007316 IL31RA (ENSSVLG00005007167) IL6ST (ENSSVLG00005007036) ANKRD55 (ENSSVLG00005006848) MAP3K1 (ENSSVLG00005006689) SETD9 (ENSSVLG00005006657) MIER3 (ENSSVLG00005006429) Marmotini ANCESTRAL SPECIES 32 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602.k.d ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.q ENSGT00940000154773.e.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Marmotini_b ANCESTRAL SPECIES 132 ENSGT00940000161666 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602.k.d ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b.q ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a.b Arctic ground squirrel MODERN SPECIES 709 AKR1B10 (ENSUPAG00010008453) BPGM (ENSUPAG00010008509) ##22 CALD1 (ENSUPAG00010008518) AGBL3 (ENSUPAG00010009051) TMEM140 (ENSUPAG00010009114) CYREN (ENSUPAG00010009118) WDR91 (ENSUPAG00010009126) Squirrel MODERN SPECIES 179 CPA5 (ENSSTOG00000009234) CPA1 (ENSSTOG00000009248) CEP41 (ENSSTOG00000026853) ENSSTOG00000020977 COPG2 (ENSSTOG00000021021) KLF14 (ENSSTOG00000025048) ENSSTOG00000030229 MKLN1 (ENSSTOG00000005994) ENSSTOG00000006027 PLXNA4 (ENSSTOG00000011351) CHCHD3 (ENSSTOG00000022282) EXOC4 (ENSSTOG00000024231) LRGUK (ENSSTOG00000012348) SLC35B4 (ENSSTOG00000012363) ENSSTOG00000012371 BPGM (ENSSTOG00000021755) ##22 CALD1 (ENSSTOG00000027385) ENSSTOG00000030672 TMEM140 (ENSSTOG00000019415) CYREN (ENSSTOG00000030552) WDR91 (ENSSTOG00000003883) STRA8 (ENSSTOG00000004803) ENSSTOG00000031437 ENSSTOG00000025611 Alpin marmot MODERN SPECIES 35 CPA1 (ENSMMMG00000013359) CEP41 (ENSMMMG00000013323) ENSMMMG00000013281 COPG2 (ENSMMMG00000013226) TSGA13 (ENSMMMG00000013202) MKLN1 (ENSMMMG00000013175) ENSMMMG00000013162 PLXNA4 (ENSMMMG00000013118) CHCHD3 (ENSMMMG00000013070) EXOC4 (ENSMMMG00000013008) ENSMMMG00000012947 SLC35B4 (ENSMMMG00000012929) ENSMMMG00000012909 AKR1B1 (ENSMMMG00000012887) ENSMMMG00000012873 BPGM (ENSMMMG00000012869) ##22 CALD1 (ENSMMMG00000012678) ENSMMMG00000012663 TMEM140 (ENSMMMG00000012659) CYREN (ENSMMMG00000012651) WDR91 (ENSMMMG00000012635) ENSMMMG00000012627 ENSMMMG00000012609 CNOT4 (ENSMMMG00000012502) NUP205 (ENSMMMG00000012455) STMP1 (ENSMMMG00000012449) SLC13A4 (ENSMMMG00000012430) FAM180A (ENSMMMG00000012425) MTPN (ENSMMMG00000012419) CHRM2 (ENSMMMG00000012413) PTN (ENSMMMG00000012405) Hystricomorpha ANCESTRAL SPECIES 35 ENSGT00940000155287.j ENSGT00940000154773.d ENSGT00940000154773.c ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Naked mole-rat female MODERN SPECIES 17 ICA1L (ENSHGLG00000007772) ENSHGLG00000032915 ENSHGLG00000042809 FAM117B (ENSHGLG00000010337) BMPR2 (ENSHGLG00000004325) ENSHGLG00000034448 ENSHGLG00000037661 ENSHGLG00000011278 SUMO1 (ENSHGLG00000016423) KIAA2012 (ENSHGLG00000016559) FZD7 (ENSHGLG00000033977) ENSHGLG00000009970 ENSHGLG00000005076 ENSHGLG00000008556 ENSHGLG00000010076 BPGM (ENSHGLG00000049257) ##22 ENSHGLG00000012139 TMEM140 (ENSHGLG00000043264) CYREN (ENSHGLG00000049991) WDR91 (ENSHGLG00000004516) STRA8 (ENSHGLG00000005005) ENSHGLG00000006398 CNOT4 (ENSHGLG00000011533) NUP205 (ENSHGLG00000016088) STMP1 (ENSHGLG00000046204) SLC13A4 (ENSHGLG00000004963) FAM180A (ENSHGLG00000005791) MTPN (ENSHGLG00000042267) ENSHGLG00000035315 ENSHGLG00000037486 ENSHGLG00000008188 Hystricomorpha_a ANCESTRAL SPECIES 40 ENSGT00940000155287.j ENSGT00940000154773.d ENSGT00940000154773.c ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 Guinea pig MODERN SPECIES 10 INTS3 (ENSCPOG00000009450) NPR1 (ENSCPOG00000025084) ILF2 (ENSCPOG00000005835) SNAPIN (ENSCPOG00000032621) CHTOP (ENSCPOG00000005829) S100A1 (ENSCPOG00000005826) S100A13 (ENSCPOG00000005824) S100A14 (ENSCPOG00000013796) S100A16 (ENSCPOG00000030814) S100A3 (ENSCPOG00000038473) S100A4 (ENSCPOG00000035079) S100A5 (ENSCPOG00000039473) ENSCPOG00000023687 ENSCPOG00000020852 ENSCPOG00000039149 BPGM (ENSCPOG00000000423) ##22 CALD1 (ENSCPOG00000023504) ENSCPOG00000037702 TMEM140 (ENSCPOG00000040498) CYREN (ENSCPOG00000013847) WDR91 (ENSCPOG00000014958) STRA8 (ENSCPOG00000013849) ENSCPOG00000019401 CNOT4 (ENSCPOG00000011526) NUP205 (ENSCPOG00000004693) SLC13A4 (ENSCPOG00000015296) FAM180A (ENSCPOG00000030840) MTPN (ENSCPOG00000038889) CHRM2 (ENSCPOG00000014714) PTN (ENSCPOG00000008856) DGKI (ENSCPOG00000008861) Hystricomorpha_b ANCESTRAL SPECIES 40 ENSGT00940000155287.j ENSGT00940000164182 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 Long-tailed chinchilla MODERN SPECIES 201 ENSCLAG00000001313 ENSCLAG00000001289 ENSCLAG00000001269 ENSCLAG00000001198 BPGM (ENSCLAG00000001189) ##22 ENSCLAG00000001133 AGBL3 (ENSCLAG00000001045) TMEM140 (ENSCLAG00000001006) CYREN (ENSCLAG00000002019) WDR91 (ENSCLAG00000002001) STRA8 (ENSCLAG00000001947) ENSCLAG00000001908 CNOT4 (ENSCLAG00000001857) NUP205 (ENSCLAG00000001732) SLC13A4 (ENSCLAG00000001665) FAM180A (ENSCLAG00000001642) MTPN (ENSCLAG00000001634) CHRM2 (ENSCLAG00000017448) PTN (ENSCLAG00000001593) DGKI (ENSCLAG00000001507) Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 203 ENSODEG00000002222 ENSODEG00000002212 ##22 SUCLG1 (ENSODEG00000002195) DNAH6 (ENSODEG00000003756) ENSODEG00000003596 ENSODEG00000003586 TCF7L1 (ENSODEG00000003559) RETSAT (ENSODEG00000003469) ELMOD3 (ENSODEG00000003393) CAPG (ENSODEG00000003321) ENSODEG00000018929 SH2D6 (ENSODEG00000003239) ENSODEG00000003186 GGCX (ENSODEG00000003141) VAMP8 (ENSODEG00000003107) VAMP5 (ENSODEG00000003093) RNF181 (ENSODEG00000003046) Degu MODERN SPECIES 155 TRIML1 (ENSODEG00000004209) TRIML2 (ENSODEG00000008769) ZFP42 (ENSODEG00000008611) FAT1 (ENSODEG00000006612) MTNR1A (ENSODEG00000006395) F11 (ENSODEG00000006089) KLKB1 (ENSODEG00000005385) CYP4V2 (ENSODEG00000005274) FAM149A (ENSODEG00000004770) ENSODEG00000004484 SORBS2 (ENSODEG00000005160) PDLIM3 (ENSODEG00000004693) CCDC110 (ENSODEG00000004653) ENSODEG00000004639 ##22 ENSODEG00000004559 ENSODEG00000004502 ANKRD37 (ENSODEG00000004483) LRP2BP (ENSODEG00000004365) ENSODEG00000004230 SNX25 (ENSODEG00000004714) CFAP97 (ENSODEG00000004330) ENSODEG00000004319 HELT (ENSODEG00000004307) ENSODEG00000019028 ACSL1 (ENSODEG00000004265) CENPU (ENSODEG00000004238) PRIMPOL (ENSODEG00000004070) ENSODEG00000005237 ENSODEG00000005217 Degu MODERN SPECIES 73 ENSODEG00000020263 S100A3 (ENSODEG00000013148) S100A4 (ENSODEG00000012742) S100A5 (ENSODEG00000014013) ENSODEG00000013796 ENSODEG00000019989 ENSODEG00000012074 ENSODEG00000012482 ENSODEG00000013457 ENSODEG00000013825 ENSODEG00000012132 ENSODEG00000013270 ENSODEG00000012991 ENSODEG00000013434 ENSODEG00000013394 ENSODEG00000012488 ##22 CALD1 (ENSODEG00000013379) ENSODEG00000013754 ENSODEG00000014047 ENSODEG00000014052 STRA8 (ENSODEG00000012732) ENSODEG00000013032 ENSODEG00000014921 CNOT4 (ENSODEG00000012975) NUP205 (ENSODEG00000014182) SLC13A4 (ENSODEG00000013803) FAM180A (ENSODEG00000013151) MTPN (ENSODEG00000014300) SCN3A (ENSODEG00000014666) ENSODEG00000012704 SLC38A11 (ENSODEG00000013030) Degu MODERN SPECIES 42 ENSODEG00000014596 FBXL19 (ENSODEG00000015007) ORAI3 (ENSODEG00000014334) ENSODEG00000014550 HSD3B7 (ENSODEG00000014512) STX1B (ENSODEG00000014528) STX4 (ENSODEG00000014502) ZNF668 (ENSODEG00000014844) ZNF646 (ENSODEG00000014966) PRSS53 (ENSODEG00000014688) VKORC1 (ENSODEG00000014946) BCKDK (ENSODEG00000014800) KAT8 (ENSODEG00000014799) PRSS8 (ENSODEG00000015589) PRSS36 (ENSODEG00000015855) ENSODEG00000014572 ##22 ENSODEG00000015325 TRIM72 (ENSODEG00000016819) ITGAM (ENSODEG00000015054) ITGAX (ENSODEG00000014867) ITGAD (ENSODEG00000014989) COX6A2 (ENSODEG00000016022) ARMC5 (ENSODEG00000015387) TGFB1I1 (ENSODEG00000014864) SLC5A2 (ENSODEG00000015719) RUSF1 (ENSODEG00000015529) ENSODEG00000016207 ENSODEG00000015107 ENSODEG00000015248 MTO1 (ENSODEG00000015147) ENSODEG00000015292 Degu MODERN SPECIES 48 ENSODEG00000013061 ADCK1 (ENSODEG00000011924) NRXN3 (ENSODEG00000012236) ENSODEG00000012759 ENSODEG00000011981 CEP128 (ENSODEG00000011055) TSHR (ENSODEG00000011682) ENSODEG00000019902 ENSODEG00000013483 ENSODEG00000013306 STON2 (ENSODEG00000012136) SEL1L (ENSODEG00000012682) ENSODEG00000011541 ENSODEG00000012512 ENSODEG00000012309 ENSODEG00000012051 ##22 ENSODEG00000011370 ENSODEG00000020046 ENSODEG00000011279 NECTIN3 (ENSODEG00000011126) CD96 (ENSODEG00000011641) PLCXD2 (ENSODEG00000012093) ENSODEG00000019911 PHLDB2 (ENSODEG00000010850) ABHD10 (ENSODEG00000012002) TAGLN3 (ENSODEG00000011777) TMPRSS7 (ENSODEG00000013342) ENSODEG00000011041 C3orf52 (ENSODEG00000012645) GCSAM (ENSODEG00000010735) SLC9C1 (ENSODEG00000011809) Lagomorpha ANCESTRAL SPECIES 122 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00940000163415 ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00940000154773 ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00980000201542 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 Rabbit MODERN SPECIES 18 KEL (ENSOCUG00000007569) ENSOCUG00000007563 TRPV5 (ENSOCUG00000007559) COPG2 (ENSOCUG00000022849) TSGA13 (ENSOCUG00000025738) KLF14 (ENSOCUG00000022893) MKLN1 (ENSOCUG00000016281) ENSOCUG00000025092 PLXNA4 (ENSOCUG00000015552) ENSOCUG00000024528 ENSOCUG00000014032 ENSOCUG00000011678 SLC35B4 (ENSOCUG00000017218) AKR1B1 (ENSOCUG00000016605) AKR1B10 (ENSOCUG00000026383) BPGM (ENSOCUG00000003144) ##22 CALD1 (ENSOCUG00000008127) AGBL3 (ENSOCUG00000014749) TMEM140 (ENSOCUG00000003182) ENSOCUG00000025101 ENSOCUG00000031050 WDR91 (ENSOCUG00000014199) STRA8 (ENSOCUG00000001063) ENSOCUG00000027714 CNOT4 (ENSOCUG00000013448) NUP205 (ENSOCUG00000012757) STMP1 (ENSOCUG00000039376) SLC13A4 (ENSOCUG00000001867) FAM180A (ENSOCUG00000001870) MEST (ENSOCUG00000006752) CEP41 (ENSOCUG00000007004) Pika MODERN SPECIES 4453 AKR1B10 (ENSOPRG00000009551) BPGM (ENSOPRG00000009567) ##22 Tree shrew MODERN SPECIES 4768 BPGM (ENSTBEG00000015193) ##22 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00390000009822 ENSGT00950000182965.a.b.b.a.a.a.a.b.a ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000160916 ENSGT00390000014089 ENSGT00390000013192 ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Opossum MODERN SPECIES 7 MKLN1 (ENSMODG00000014474) ENSMODG00000029014 ENSMODG00000029114 ENSMODG00000039894 CHCHD3 (ENSMODG00000014416) ENSMODG00000041104 ENSMODG00000029780 ENSMODG00000042968 EXOC4 (ENSMODG00000014411) ENSMODG00000050475 ENSMODG00000014373 SLC35B4 (ENSMODG00000014153) ENSMODG00000014154 ENSMODG00000027377 AKR1B1 (ENSMODG00000014148) BPGM (ENSMODG00000014127) ##22 CALD1 (ENSMODG00000014124) ENSMODG00000037793 ENSMODG00000014102 ENSMODG00000014100 WDR91 (ENSMODG00000014097) ENSMODG00000048305 STRA8 (ENSMODG00000014081) ENSMODG00000014075 ENSMODG00000047110 CNOT4 (ENSMODG00000014068) NUP205 (ENSMODG00000014060) SLC13A4 (ENSMODG00000013989) FAM180A (ENSMODG00000050525) ENSMODG00000042806 ENSMODG00000029218 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00940000161666 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00950000182965.a.b.b.a.a.a.a.b.a ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00390000014089 ENSGT00390000013192.g ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 Diprotodontia ANCESTRAL SPECIES 28 ENSGT00940000161666 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00950000182965.a.b.b.a.a.a.a.b.a ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00390000014089 ENSGT00390000013192.g ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00940000166253 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Diprotodontia_a ANCESTRAL SPECIES 27 ENSGT00940000161666 ENSGT00940000158082.b ENSGT00390000002222 ENSGT00510000047602 ENSGT00390000016313.a.a ENSGT00950000182965.a.b.b.a.a.a.a.b.a ENSGT00390000001702 ENSGT00730000111314 ENSGT01050000244850.B ENSGT00390000014165.c.a.b ENSGT00390000000903.a ENSGT00390000001439 ENSGT00940000157992 ENSGT00390000002915 ENSGT00940000153272.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00390000014089 ENSGT00390000013192.g ENSGT00390000001566 ENSGT00390000017181 ENSGT00950000182953.B.a ENSGT00940000166253 ENSGT00390000000068 ENSGT00390000004003 ENSGT00550000076278 ENSGT01030000234550.a.a.d.a.b ENSGT00940000154479.b ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a Common wonbat MODERN SPECIES 1093 COPG2 (ENSVURG00010013471) ENSVURG00010013493 ENSVURG00010013511 MKLN1 (ENSVURG00010013523) ENSVURG00010013534 ENSVURG00010013539 ENSVURG00010013543 ENSVURG00010013546 ENSVURG00010013556 CHCHD3 (ENSVURG00010013561) EXOC4 (ENSVURG00010013575) ENSVURG00010013587 SLC35B4 (ENSVURG00010013598) AKR1B1 (ENSVURG00010013605) ENSVURG00010013610 BPGM (ENSVURG00010013613) ##22 CALD1 (ENSVURG00010013623) ENSVURG00010013640 ENSVURG00010013643 WDR91 (ENSVURG00010013651) STRA8 (ENSVURG00010013665) ENSVURG00010013729 ENSVURG00010013741 CNOT4 (ENSVURG00010013748) NUP205 (ENSVURG00010013775) ENSVURG00010013802 SLC13A4 (ENSVURG00010013805) FAM180A (ENSVURG00010013817) MTPN (ENSVURG00010013821) ENSVURG00010013828 CHRM2 (ENSVURG00010013831) koala MODERN SPECIES 96 CPA1 (ENSPCIG00000027465) CEP41 (ENSPCIG00000027466) MEST (ENSPCIG00000021165) ENSPCIG00000021156 ENSPCIG00000016274 MKLN1 (ENSPCIG00000007024) ENSPCIG00000035530 PLXNA4 (ENSPCIG00000034025) ENSPCIG00000021858 ENSPCIG00000035253 CHCHD3 (ENSPCIG00000029392) EXOC4 (ENSPCIG00000029388) LRGUK (ENSPCIG00000033934) SLC35B4 (ENSPCIG00000033782) AKR1B1 (ENSPCIG00000029379) BPGM (ENSPCIG00000016971) ##22 CALD1 (ENSPCIG00000012524) ENSPCIG00000014574 ENSPCIG00000014572 WDR91 (ENSPCIG00000029641) STRA8 (ENSPCIG00000029635) ENSPCIG00000029632 ENSPCIG00000029627 CNOT4 (ENSPCIG00000029622) NUP205 (ENSPCIG00000029618) Wallaby MODERN SPECIES 12060 BPGM (ENSMEUG00000007787) ##22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000004168 CPA5 (ENSSHAG00000006574) CPA1 (ENSSHAG00000022446) CEP41 (ENSSHAG00000007331) MEST (ENSSHAG00000007674) COPG2 (ENSSHAG00000007876) ENSSHAG00000022604 MKLN1 (ENSSHAG00000012104) ENSSHAG00000012869 PLXNA4 (ENSSHAG00000015750) CHCHD3 (ENSSHAG00000017588) EXOC4 (ENSSHAG00000018170) LRGUK (ENSSHAG00000003609) SLC35B4 (ENSSHAG00000006186) AKR1B1 (ENSSHAG00000008763) BPGM (ENSSHAG00000024377) ##22 CALD1 (ENSSHAG00000010400) ENSSHAG00000028039 ENSSHAG00000021318 WDR91 (ENSSHAG00000012757) STRA8 (ENSSHAG00000013084) ENSSHAG00000013202 CNOT4 (ENSSHAG00000013639) NUP205 (ENSSHAG00000014490) ENSSHAG00000032393 SLC13A4 (ENSSHAG00000014821) FAM180A (ENSSHAG00000020612) MTPN (ENSSHAG00000028122) ENSSHAG00000016866 CHRM2 (ENSSHAG00000006753) PTN (ENSSHAG00000005137) Platypus MODERN SPECIES 1 ENSOANG00000011467 CPA1 (ENSOANG00000011468) CEP41 (ENSOANG00000011470) MEST (ENSOANG00000011469) COPG2 (ENSOANG00000011471) ENSOANG00000042760 MKLN1 (ENSOANG00000011473) ENSOANG00000029408 PLXNA4 (ENSOANG00000011477) CHCHD3 (ENSOANG00000011478) EXOC4 (ENSOANG00000011479) LRGUK (ENSOANG00000011480) SLC35B4 (ENSOANG00000011481) ENSOANG00000011482 ENSOANG00000011483 BPGM (ENSOANG00000011484) ##22 ENSOANG00000005001 ENSOANG00000005002 ENSOANG00000047333 WDR91 (ENSOANG00000005003) ENSOANG00000049552 ENSOANG00000049125 CNOT4 (ENSOANG00000005006) NUP205 (ENSOANG00000005007) SLC13A4 (ENSOANG00000005009) FAM180A (ENSOANG00000040937) ENSOANG00000045604 ENSOANG00000005013 CHRM2 (ENSOANG00000005015) PTN (ENSOANG00000005016) DGKI (ENSOANG00000005017) Anura ANCESTRAL SPECIES 54 ENSGT00390000013337 ENSGT00530000064023 ENSGT00390000006865 ENSGT00940000164299 ENSGT00940000158576 ENSGT00940000161860 ENSGT00390000007725.A.a ENSGT00940000155840.C ENSGT00940000155810 ENSGT00940000155083.a ENSGT00940000156000 ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000163509.b ENSGT00940000158509 ENSGT00390000002110 ENSGT00620000088064 ENSGT00390000000080.a.b ENSGT00940000157328.C ENSGT00940000159577 ENSGT00940000161111 ENSGT00390000006633.a ENSGT00940000156690 ENSGT00390000011576.b ENSGT00390000010054.a ENSGT00440000033329.a.a.a ENSGT00940000157342 Frog MODERN SPECIES 3 galnt10 (ENSXETG00000008481) ENSXETG00000043354 rmnd1 (ENSXETG00000026520) armt1 (ENSXETG00000035782) ndufa9 (ENSXETG00000008484) kcna6 (ENSXETG00000008488) kcna1 (ENSXETG00000048960) kcna5 (ENSXETG00000008493) ENSXETG00000042315 ENSXETG00000041412 ntf3 (ENSXETG00000008495) ano2 (ENSXETG00000008496) vwf (ENSXETG00000023591) cd9 (ENSXETG00000023609) tnni1.2 (ENSXETG00000023613) bpgm (ENSXETG00000023616) ##22 ENSXETG00000041577 cald1 (ENSXETG00000023618) havcr1 (ENSXETG00000026528) sgcd (ENSXETG00000039919) ENSXETG00000037566 ENSXETG00000044379 mrpl22 (ENSXETG00000019403) gemin5 (ENSXETG00000019404) ccdc69 (ENSXETG00000019409) gm2a (ENSXETG00000040972) ENSXETG00000049352 ENSXETG00000040181 ENSXETG00000042567 slc36a1 (ENSXETG00000019424) ENSXETG00000046375 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000009481 ENSLLEG00000009470 KCNA1 (ENSLLEG00000009448) ENSLLEG00000009430 NTF3 (ENSLLEG00000009399) ENSLLEG00000009336 ENSLLEG00000009245 ENSLLEG00000009234 ENSLLEG00000009172 ENSLLEG00000009133 VWF (ENSLLEG00000007361) ENSLLEG00000007170 ENSLLEG00000007138 CWF19L1 (ENSLLEG00000006695) ENSLLEG00000006606 BPGM (ENSLLEG00000006580) ##22 ENSLLEG00000006563 CALD1 (ENSLLEG00000005885) ENSLLEG00000005787 ENSLLEG00000005775 SGCD (ENSLLEG00000005708) ENSLLEG00000005686 ENSLLEG00000005673 MRPL22 (ENSLLEG00000005595) GEMIN5 (ENSLLEG00000005303) CNOT8 (ENSLLEG00000005260) ENSLLEG00000005235 LARP1 (ENSLLEG00000005153) ENSLLEG00000005129 HAND1 (ENSLLEG00000005115) SAP30L (ENSLLEG00000005087) Coelacanth MODERN SPECIES 832 ENSLACG00000014819 ENSLACG00000014645 BPGM (ENSLACG00000014417) ##22 CALD1 (ENSLACG00000011908) RERG (ENSLACG00000022452) Actinopterygii ANCESTRAL SPECIES 461 ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000154709.a.b.b ENSGT00940000159750 ENSGT00940000154814.b ENSGT00940000156403.b Neopterygii ANCESTRAL SPECIES 29 ENSGT00940000158685 ENSGT00940000155480.d ENSGT00940000157682.B ENSGT01090000260145 ENSGT00890000139436.B ENSGT00390000010382 ENSGT00390000005941 ENSGT00390000013347.a ENSGT00940000167703 ENSGT00390000010852 ENSGT00940000155659 ENSGT00940000164174 ENSGT00940000160513 ENSGT00550000075044 ENSGT01030000234588.b.b.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a ENSGT00940000154709.a.b.b ENSGT00940000155504 ENSGT00940000156246 ENSGT00940000164630 ENSGT01050000244882.b.d ENSGT00940000154738.a ENSGT00940000155419 ENSGT00940000155915 ENSGT00950000183062.a.a.b ENSGT00940000156242 ENSGT00390000013995.b.b ENSGT00390000016228.b ENSGT00940000157529 ENSGT00940000158636 Osteoglossocephalai ANCESTRAL SPECIES 42 ENSGT00940000158685 ENSGT00940000155480.d ENSGT00940000157682.B.a ENSGT01090000260145 ENSGT00890000139436.B ENSGT00390000010382 ENSGT00390000005941 ENSGT00390000010852 ENSGT00390000013347.a ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.b.a ENSGT01030000234588.b.b.b.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000153901.a.a.b ENSGT00940000154709.a.b.b ENSGT00940000155504 ENSGT00940000156246 ENSGT00940000164630 ENSGT01050000244882.b.d ENSGT00940000154738.a.r ENSGT00940000154738.a.q ENSGT00940000155419 ENSGT00940000155915.b ENSGT00950000183062.a.a.b.b.a ENSGT00390000013995.b.b.l ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b Clupeocephala ANCESTRAL SPECIES 399 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT00940000175224 ENSGT00940000154709.a.b.b.c ENSGT01030000234588.b.b.b.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a Euteleosteomorpha ANCESTRAL SPECIES 21 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a ENSGT01030000234588.b.b.b.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b Acanthomorphata ANCESTRAL SPECIES 4 ENSGT00940000155849.g ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000168203 ENSGT00940000157529.i.a ENSGT00940000158636 ENSGT00940000158792 Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT01030000234588.b.b.b.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Tiger tail seahorse MODERN SPECIES 446 cav1 (ENSHCOG00000000452) met (ENSHCOG00000016015) ENSHCOG00000000450 st7 (ENSHCOG00000015979) ENSHCOG00000015945 cftr (ENSHCOG00000015934) ENSHCOG00000015882 asz1 (ENSHCOG00000000444) wnt2 (ENSHCOG00000015861) CNOT4 (ENSHCOG00000015815) zgc:136858 (ENSHCOG00000015773) ENSHCOG00000015709 ENSHCOG00000015702 ENSHCOG00000015660 ENSHCOG00000015652 bpgm (ENSHCOG00000015648) ##22 ENSHCOG00000015641 tnnt2d (ENSHCOG00000015570) ENSHCOG00000015552 dnajb9a (ENSHCOG00000015547) PNPLA8 (ENSHCOG00000015537) Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Eupercaria ANCESTRAL SPECIES 6 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00990000208084 ENSGT00940000168203 ENSGT00390000013995.b.b.l ENSGT00390000016228.a.b ENSGT00940000157529.i.a Tetraodontidae ANCESTRAL SPECIES 11 ENSGT00940000160326.d ENSGT00940000155849.g ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT01100000263518.C ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000154738.a.q ENSGT00940000167414.e ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00990000208084 ENSGT00940000168203 ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 Fugu MODERN SPECIES 21 ASB13 (ENSTRUG00000028781) NET1 (ENSTRUG00000016882) ENSTRUG00000016881 slc35b4 (ENSTRUG00000016876) golt1bb (ENSTRUG00000016875) ldhbb (ENSTRUG00000016868) tmpob (ENSTRUG00000028971) pthlhb (ENSTRUG00000016866) ENSTRUG00000033461 ENSTRUG00000029325 KCNA1 (ENSTRUG00000016864) CNOT4 (ENSTRUG00000016861) zgc:136858 (ENSTRUG00000016859) ENSTRUG00000016855 ENSTRUG00000016854 bpgm (ENSTRUG00000016853) ##22 ENSTRUG00000023529 tnnt2d (ENSTRUG00000016845) dnm1l (ENSTRUG00000016834) ENSTRUG00000022853 ENSTRUG00000016812 CNTN1 (ENSTRUG00000016799) PDZRN4 (ENSTRUG00000016792) GXYLT1 (ENSTRUG00000016788) YAF2 (ENSTRUG00000016786) ENSTRUG00000023687 prickle1a (ENSTRUG00000016783) ENSTRUG00000023125 ADAMTS20 (ENSTRUG00000016748) irak4 (ENSTRUG00000025150) twf1a (ENSTRUG00000025657) Tetraodon MODERN SPECIES 4 CAMK1D (ENSTNIG00000016011) dhtkd1 (ENSTNIG00000016010) ENSTNIG00000016009 taf3 (ENSTNIG00000016008) ASB13 (ENSTNIG00000016007) NET1 (ENSTNIG00000016006) slc35b4 (ENSTNIG00000016005) ldhbb (ENSTNIG00000016004) tmpob (ENSTNIG00000016003) pthlhb (ENSTNIG00000016002) KCNA1 (ENSTNIG00000016001) CNOT4 (ENSTNIG00000016000) zgc:136858 (ENSTNIG00000015999) ENSTNIG00000000259 ENSTNIG00000015998 bpgm (ENSTNIG00000015997) ##22 ENSTNIG00000015996 tnnt2d (ENSTNIG00000015995) dnm1l (ENSTNIG00000015994) ENSTNIG00000015993 ENSTNIG00000015992 CNTN1 (ENSTNIG00000015991) PDZRN4 (ENSTNIG00000015990) GXYLT1 (ENSTNIG00000015989) YAF2 (ENSTNIG00000015988) ENSTNIG00000015987 ENSTNIG00000015986 prickle1a (ENSTNIG00000015985) ADAMTS20 (ENSTNIG00000015984) irak4 (ENSTNIG00000015983) twf1a (ENSTNIG00000015982) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.f ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00990000208084 ENSGT00940000168203 ENSGT00390000013995.b.b.l ENSGT00390000016228.a.b ENSGT00940000157529.i.a Ballan wrasse MODERN SPECIES 15 golt1bb (ENSLBEG00000010261) ldhbb (ENSLBEG00000010213) tmpob (ENSLBEG00000010183) pthlhb (ENSLBEG00000010155) ENSLBEG00000010135 ENSLBEG00000010097 KCNA1 (ENSLBEG00000010081) CNOT4 (ENSLBEG00000009999) zgc:136858 (ENSLBEG00000009831) ENSLBEG00000009735 ENSLBEG00000009522 ENSLBEG00000009453 ENSLBEG00000009437 ENSLBEG00000009423 ENSLBEG00000009399 bpgm (ENSLBEG00000009382) ##22 ENSLBEG00000009310 tnnt2d (ENSLBEG00000008713) dnm1l (ENSLBEG00000008434) dnajb9a (ENSLBEG00000008376) ENSLBEG00000008315 NRCAM (ENSLBEG00000007863) CNTN1 (ENSLBEG00000007683) PDZRN4 (ENSLBEG00000007631) GXYLT1 (ENSLBEG00000007556) YAF2 (ENSLBEG00000007500) ENSLBEG00000007482 prickle1a (ENSLBEG00000007417) ENSLBEG00000007381 Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.f ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00990000208084 ENSGT00940000168203 ENSGT00390000013995.b.b.l ENSGT00390000016228.a.b ENSGT00940000157529.i.a Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.f ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Gilthead seabream MODERN SPECIES 22 ENSSAUG00010010519 slc35b4 (ENSSAUG00010010522) golt1bb (ENSSAUG00010010527) ldhbb (ENSSAUG00010010530) tmpob (ENSSAUG00010010532) PTHrP (ENSSAUG00010010533) ENSSAUG00010010534 KCNA1 (ENSSAUG00010010536) CNOT4 (ENSSAUG00010010539) zgc:136858 (ENSSAUG00010010549) ENSSAUG00010010551 tnni4a (ENSSAUG00010010554) ENSSAUG00010010556 ENSSAUG00010010558 ENSSAUG00010010600 bpgm (ENSSAUG00010010602) ##22 ENSSAUG00010010603 sTnT2 (ENSSAUG00010010604) dnm1l (ENSSAUG00010010614) dnajb9a (ENSSAUG00010010717) ENSSAUG00010010719 ENSSAUG00010011084 CNTN1 (ENSSAUG00010023482) PDZRN4 (ENSSAUG00010024511) GXYLT1 (ENSSAUG00010024512) YAF2 (ENSSAUG00010024514) YAF2 (ENSSAUG00010024515) ENSSAUG00010024516 prickle1a (ENSSAUG00010024517) ENSSAUG00010024519 ADAMTS20 (ENSSAUG00010024533) Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.f ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 European seabass MODERN SPECIES 19 ENSDLAG00005024786 ENSDLAG00005024797 slc35b4 (ENSDLAG00005024790) ENSDLAG00005026737 ldhbb (ENSDLAG00005024801) ENSDLAG00005024805 pthlhb (ENSDLAG00005024806) ENSDLAG00005024807 ENSDLAG00005027000 ENSDLAG00005024813 zgc:136858 (ENSDLAG00005024820) ENSDLAG00005034999 ENSDLAG00005031077 ENSDLAG00005028687 ENSDLAG00005024834 bpgm (ENSDLAG00005024838) ##22 ENSDLAG00005029387 tnnt2d (ENSDLAG00005024843) dnm1l (ENSDLAG00005024853) dnajb9a (ENSDLAG00005024892) ENSDLAG00005024898 ENSDLAG00005025086 CNTN1 (ENSDLAG00005010046) PDZRN4 (ENSDLAG00005013514) GXYLT1 (ENSDLAG00005013545) PPHLN1 (ENSDLAG00005013563) PRICKLE1 (ENSDLAG00005013602) ENSDLAG00005013615 ADAMTS20 (ENSDLAG00005013654) irak4 (ENSDLAG00005014882) twf1a (ENSDLAG00005015040) Large yellow croaker MODERN SPECIES 492 ENSLCRG00005012126 golt1bb (ENSLCRG00005012122) ENSLCRG00005012119 ldhbb (ENSLCRG00005012117) tmpob (ENSLCRG00005012116) pthlhb (ENSLCRG00005012114) ENSLCRG00005020084 ENSLCRG00005020083 KCNA1 (ENSLCRG00005020082) CNOT4 (ENSLCRG00005020063) zgc:136858 (ENSLCRG00005020060) ENSLCRG00005020059 tnni4a (ENSLCRG00005020058) ENSLCRG00005020056 ENSLCRG00005020054 bpgm (ENSLCRG00005020053) ##22 ENSLCRG00005020052 tnnt2d (ENSLCRG00005020050) dnm1l (ENSLCRG00005019883) dnajb9a (ENSLCRG00005019873) ENSLCRG00005019659 NRCAM (ENSLCRG00005019196) CNTN1 (ENSLCRG00005019070) PDZRN4 (ENSLCRG00005019063) GXYLT1 (ENSLCRG00005019061) YAF2 (ENSLCRG00005019058) ENSLCRG00005019054 prickle1a (ENSLCRG00005019050) PPHLN1 (ENSLCRG00005019041) ENSLCRG00005019040 ENSLCRG00005019037 Perciformes ANCESTRAL SPECIES 7 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.f ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00990000208084 ENSGT00940000168203 ENSGT00940000157529.i.a ENSGT00940000170627 Cottioidei ANCESTRAL SPECIES 6 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000167414.e ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00990000208084 ENSGT00940000168203 ENSGT00940000157529.i.a ENSGT00940000170627 Lumpfish MODERN SPECIES 21 NET1 (ENSCLMG00005002008) ENSCLMG00005001990 slc35b4 (ENSCLMG00005001980) golt1bb (ENSCLMG00005001976) ldhbb (ENSCLMG00005001969) tmpob (ENSCLMG00005001968) pthlhb (ENSCLMG00005001967) ENSCLMG00005001966 KCNA1 (ENSCLMG00005001965) CNOT4 (ENSCLMG00005001931) zgc:136858 (ENSCLMG00005001925) ENSCLMG00005001919 ENSCLMG00005001915 ENSCLMG00005001855 ENSCLMG00005001800 bpgm (ENSCLMG00005001797) ##22 tnnt2d (ENSCLMG00005001794) dnm1l (ENSCLMG00005001448) dnajb9a (ENSCLMG00005001306) ENSCLMG00005001196 ENSCLMG00005000608 CNTN1 (ENSCLMG00005000220) PDZRN4 (ENSCLMG00005000134) GXYLT1 (ENSCLMG00005000113) YAF2 (ENSCLMG00005000104) PPHLN1 (ENSCLMG00005000074) prickle1a (ENSCLMG00005020032) ENSCLMG00005020028 ADAMTS20 (ENSCLMG00005020015) ENSCLMG00005020012 irak4 (ENSCLMG00005020008) Stickleback MODERN SPECIES 14 ENSGACG00000004384 NET1 (ENSGACG00000004380) chchd3b (ENSGACG00000004357) slc35b4 (ENSGACG00000004350) golt1bb (ENSGACG00000004333) ldhbb (ENSGACG00000004329) tmpob (ENSGACG00000004325) pthlhb (ENSGACG00000004317) ENSGACG00000004313 ENSGACG00000004310 KCNA1 (ENSGACG00000004302) CNOT4 (ENSGACG00000004276) zgc:136858 (ENSGACG00000004250) ENSGACG00000004247 ENSGACG00000004229 bpgm (ENSGACG00000004215) ##22 ENSGACG00000004208 tnnt2d (ENSGACG00000004200) dnm1l (ENSGACG00000004145) dnajb9a (ENSGACG00000004142) ENSGACG00000004140 CNTN1 (ENSGACG00000004129) PDZRN4 (ENSGACG00000004122) GXYLT1 (ENSGACG00000004112) YAF2 (ENSGACG00000004103) ENSGACG00000004099 ENSGACG00000004098 prickle1a (ENSGACG00000004088) ADAMTS20 (ENSGACG00000004063) irak4 (ENSGACG00000004050) twf1a (ENSGACG00000004028) Perciformes_a ANCESTRAL SPECIES 7 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.f ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b Pike perch MODERN SPECIES 6 slc35b4 (ENSSLUG00000018079) golt1bb (ENSSLUG00000018091) ENSSLUG00000018100 ldhbb (ENSSLUG00000018108) tmpob (ENSSLUG00000018115) pthlhb (ENSSLUG00000018119) KCNA1 (ENSSLUG00000018123) CNOT4 (ENSSLUG00000018127) zgc:136858 (ENSSLUG00000018154) ENSSLUG00000018174 tnni4a (ENSSLUG00000018184) ENSSLUG00000018187 ENSSLUG00000018191 ENSSLUG00000018197 ENSSLUG00000018200 bpgm (ENSSLUG00000018205) ##22 tnnt2d (ENSSLUG00000018211) dnm1l (ENSSLUG00000018225) dnajb9a (ENSSLUG00000018283) ENSSLUG00000018300 ENSSLUG00000018562 CNTN1 (ENSSLUG00000021304) PDZRN4 (ENSSLUG00000023424) ENSSLUG00000023430 GXYLT1 (ENSSLUG00000004900) YAF2 (ENSSLUG00000004904) PPHLN1 (ENSSLUG00000004908) prickle1a (ENSSLUG00000004921) ENSSLUG00000004927 ADAMTS20 (ENSSLUG00000004961) irak4 (ENSSLUG00000005222) Channel bull blenny MODERN SPECIES 20 slc35b4 (ENSCGOG00000014818) golt1bb (ENSCGOG00000014935) ldhbb (ENSCGOG00000014963) tmpob (ENSCGOG00000015003) pthlhb (ENSCGOG00000015004) ENSCGOG00000015010 ENSCGOG00000015012 KCNA1 (ENSCGOG00000015018) CNOT4 (ENSCGOG00000015027) zgc:136858 (ENSCGOG00000015305) ENSCGOG00000015309 tnni4a (ENSCGOG00000015310) ENSCGOG00000015351 ENSCGOG00000015353 ENSCGOG00000015361 bpgm (ENSCGOG00000015396) ##22 tnnt2d (ENSCGOG00000015400) dnm1l (ENSCGOG00000015520) dnajb9a (ENSCGOG00000017397) ENSCGOG00000017399 NRCAM (ENSCGOG00000017428) CNTN1 (ENSCGOG00000018721) PDZRN4 (ENSCGOG00000019879) GXYLT1 (ENSCGOG00000019881) YAF2 (ENSCGOG00000019886) PPHLN1 (ENSCGOG00000019889) prickle1a (ENSCGOG00000019892) ENSCGOG00000019897 ADAMTS20 (ENSCGOG00000019903) irak4 (ENSCGOG00000020003) twf1a (ENSCGOG00000020181) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Carangaria ANCESTRAL SPECIES 6 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Carangaria_A ANCESTRAL SPECIES ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Seriola ANCESTRAL SPECIES 5 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Greater amberjack MODERN SPECIES 86 golt1bb (ENSSDUG00000022595) ENSSDUG00000022596 ldhbb (ENSSDUG00000022601) tmpob (ENSSDUG00000022606) pthlhb (ENSSDUG00000022610) ENSSDUG00000022615 ENSSDUG00000022622 KCNA1 (ENSSDUG00000022629) CNOT4 (ENSSDUG00000022635) zgc:136858 (ENSSDUG00000022651) ENSSDUG00000022674 tnni4a (ENSSDUG00000022686) ENSSDUG00000022691 ENSSDUG00000022700 ENSSDUG00000022704 bpgm (ENSSDUG00000022717) ##22 CALD1 (ENSSDUG00000022720) tnnt2d (ENSSDUG00000022739) dnm1l (ENSSDUG00000022859) dnajb9a (ENSSDUG00000022878) PNPLA8 (ENSSDUG00000022881) NRCAM (ENSSDUG00000022888) CNTN1 (ENSSDUG00000022906) PDZRN4 (ENSSDUG00000022923) GXYLT1 (ENSSDUG00000022929) YAF2 (ENSSDUG00000022939) PPHLN1 (ENSSDUG00000022947) prickle1a (ENSSDUG00000022955) ENSSDUG00000022967 ADAMTS20 (ENSSDUG00000022977) irak4 (ENSSDUG00000023039) Yellowtail amberjack MODERN SPECIES 2437 KCNA1 (ENSSLDG00000015831) CNOT4 (ENSSLDG00000015770) zgc:136858 (ENSSLDG00000015664) ENSSLDG00000015608 tnni4a (ENSSLDG00000015533) ENSSLDG00000015473 ENSSLDG00000015355 bpgm (ENSSLDG00000015303) ##22 CALD1 (ENSSLDG00000015268) tnnt2d (ENSSLDG00000014957) dnm1l (ENSSLDG00000014797) dnajb9a (ENSSLDG00000014747) ENSSLDG00000014736 ENSSLDG00000014372 CNTN1 (ENSSLDG00000014221) Barramundi perch MODERN SPECIES 144 golt1bb (ENSLCAG00010021252) ldhbb (ENSLCAG00010021256) tmpob (ENSLCAG00010021266) pthlhb (ENSLCAG00010021268) ENSLCAG00010021270 ENSLCAG00010021271 KCNA1 (ENSLCAG00010021273) CNOT4 (ENSLCAG00010021275) zgc:136858 (ENSLCAG00010021280) ENSLCAG00010021288 tnni4a (ENSLCAG00010021290) ENSLCAG00010021291 ENSLCAG00010021295 ENSLCAG00010021296 ENSLCAG00010021299 bpgm (ENSLCAG00010021300) ##22 tnnt2d (ENSLCAG00010021309) dnm1l (ENSLCAG00010021454) dnajb9a (ENSLCAG00010021915) ENSLCAG00010021917 NRCAM (ENSLCAG00010022373) CNTN1 (ENSLCAG00010023704) PDZRN4 (ENSLCAG00010023738) GXYLT1 (ENSLCAG00010023741) YAF2 (ENSLCAG00010023745) PPHLN1 (ENSLCAG00010023747) prickle1a (ENSLCAG00010023751) ENSLCAG00010023754 ADAMTS20 (ENSLCAG00010023794) irak4 (ENSLCAG00010023870) twf1a (ENSLCAG00010023877) Pleuronectoidei ANCESTRAL SPECIES ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Tongue sole MODERN SPECIES 16 ENSCSEG00000015245 slc35b4 (ENSCSEG00000015228) golt1bb (ENSCSEG00000015217) ldhbb (ENSCSEG00000015220) tmpob (ENSCSEG00000015206) pthlhb (ENSCSEG00000015200) ENSCSEG00000015191 ENSCSEG00000015184 KCNA1 (ENSCSEG00000015180) KCNA1 (ENSCSEG00000015175) CNOT4 (ENSCSEG00000015080) zgc:136858 (ENSCSEG00000015037) ENSCSEG00000015010 ENSCSEG00000014981 ENSCSEG00000014973 bpgm (ENSCSEG00000014964) ##22 ENSCSEG00000014958 ENSCSEG00000014946 tnnt2d (ENSCSEG00000014535) dnm1l (ENSCSEG00000014488) ENSCSEG00000014481 ENSCSEG00000014473 IMPDH1 (ENSCSEG00000014337) ENSCSEG00000014305 ENSCSEG00000014293 banp (ENSCSEG00000014270) ENSCSEG00000014259 FBXO31 (ENSCSEG00000014249) polg (ENSCSEG00000014041) RHCG (ENSCSEG00000014006) gdpgp1 (ENSCSEG00000014002) Turbot MODERN SPECIES 1 golt1bb (ENSSMAG00000008750) ENSSMAG00000031141 ldhbb (ENSSMAG00000008730) tmpob (ENSSMAG00000022767) pthlhb (ENSSMAG00000008692) ENSSMAG00000008686 ENSSMAG00000037334 ENSSMAG00000008668 ENSSMAG00000008614 zgc:136858 (ENSSMAG00000008577) ENSSMAG00000008563 ENSSMAG00000008539 ENSSMAG00000008521 ENSSMAG00000026823 ENSSMAG00000022935 bpgm (ENSSMAG00000031971) ##22 ENSSMAG00000028897 tnnt2d (ENSSMAG00000008403) dnm1l (ENSSMAG00000008336) dnajb9a (ENSSMAG00000030394) ENSSMAG00000008292 NRCAM (ENSSMAG00000008243) CNTN1 (ENSSMAG00000008140) PDZRN4 (ENSSMAG00000008100) GXYLT1 (ENSSMAG00000008062) YAF2 (ENSSMAG00000008054) PRICKLE1 (ENSSMAG00000008028) PPHLN1 (ENSSMAG00000008043) ENSSMAG00000008018 ADAMTS20 (ENSSMAG00000007900) irak4 (ENSSMAG00000007871) Anabantaria ANCESTRAL SPECIES 5 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Zig-zag eel MODERN SPECIES 20 ENSMAMG00000023204 chchd3b (ENSMAMG00000023203) slc35b4 (ENSMAMG00000023202) golt1bb (ENSMAMG00000023201) ENSMAMG00000023200 ldhbb (ENSMAMG00000023199) tmpob (ENSMAMG00000023198) pthlhb (ENSMAMG00000023197) ENSMAMG00000023196 ENSMAMG00000023195 ENSMAMG00000023194 zgc:136858 (ENSMAMG00000023193) ENSMAMG00000023192 ENSMAMG00000023191 ENSMAMG00000027052 bpgm (ENSMAMG00000027408) ##22 tnnt2d (ENSMAMG00000023187) dnm1l (ENSMAMG00000023186) dnajb9a (ENSMAMG00000023185) ENSMAMG00000023184 NRCAM (ENSMAMG00000023183) CNTN1 (ENSMAMG00000023182) PDZRN4 (ENSMAMG00000023181) YAF2 (ENSMAMG00000023180) PPHLN1 (ENSMAMG00000023178) PRICKLE1 (ENSMAMG00000023177) ENSMAMG00000023176 ADAMTS20 (ENSMAMG00000023175) irak4 (ENSMAMG00000023174) twf1a (ENSMAMG00000023173) ENSMAMG00000023172 Anabantoidei ANCESTRAL SPECIES 5 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT01100000266314 ENSGT00940000158636 ENSGT00940000158792 Siamese fighting fish MODERN SPECIES 17 ENSBSLG00000020430 slc35b4 (ENSBSLG00000020433) golt1bb (ENSBSLG00000020450) ENSBSLG00000020456 ldhbb (ENSBSLG00000020458) tmpob (ENSBSLG00000020475) pthlhb (ENSBSLG00000020476) ENSBSLG00000020479 KCNA1 (ENSBSLG00000020481) CNOT4 (ENSBSLG00000020482) zgc:136858 (ENSBSLG00000020493) ENSBSLG00000020505 tnni4a (ENSBSLG00000020512) ENSBSLG00000020517 ENSBSLG00000020526 bpgm (ENSBSLG00000020529) ##22 CALD1 (ENSBSLG00000020532) tnnt2d (ENSBSLG00000020535) dnm1l (ENSBSLG00000020578) dnajb9a (ENSBSLG00000020854) PNPLA8 (ENSBSLG00000020857) NRCAM (ENSBSLG00000020914) CNTN1 (ENSBSLG00000024323) PDZRN4 (ENSBSLG00000024471) GXYLT1 (ENSBSLG00000024478) YAF2 (ENSBSLG00000024491) PPHLN1 (ENSBSLG00000024499) prickle1a (ENSBSLG00000024530) ENSBSLG00000024532 ENSBSLG00000024536 ADAMTS20 (ENSBSLG00000024588) Climbing perch MODERN SPECIES 19 chchd3b (ENSATEG00000017382) slc35b4 (ENSATEG00000017404) golt1bb (ENSATEG00000017434) ENSATEG00000028717 ldhbb (ENSATEG00000017453) tmpob (ENSATEG00000017483) pthlhb (ENSATEG00000017497) ENSATEG00000017517 ENSATEG00000017560 ENSATEG00000017580 zgc:136858 (ENSATEG00000017671) ENSATEG00000028067 ENSATEG00000017735 ENSATEG00000017758 ENSATEG00000017792 bpgm (ENSATEG00000017809) ##22 ENSATEG00000017824 tnnt2d (ENSATEG00000017875) dnm1l (ENSATEG00000018248) dnajb9a (ENSATEG00000025169) ENSATEG00000018329 ENSATEG00000018349 CNTN1 (ENSATEG00000018430) PDZRN4 (ENSATEG00000018448) GXYLT1 (ENSATEG00000018487) YAF2 (ENSATEG00000028697) PPHLN1 (ENSATEG00000027966) PRICKLE1 (ENSATEG00000018535) ENSATEG00000018565 ADAMTS20 (ENSATEG00000018585) irak4 (ENSATEG00000018652) Ovalentaria ANCESTRAL SPECIES 7 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00940000155849.g ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Mangrove rivulus MODERN SPECIES 6 NET1 (ENSKMAG00000004260) ENSKMAG00000004330 golt1bb (ENSKMAG00000004346) slc35b4 (ENSKMAG00000004389) ldhbb (ENSKMAG00000004441) tmpob (ENSKMAG00000004488) pthlhb (ENSKMAG00000004512) ENSKMAG00000004526 ENSKMAG00000004550 KCNA1 (ENSKMAG00000004556) CNOT4 (ENSKMAG00000004581) zgc:136858 (ENSKMAG00000004663) ENSKMAG00000004737 tnni4a (ENSKMAG00000004784) ENSKMAG00000004834 bpgm (ENSKMAG00000004859) ##22 ENSKMAG00000004875 tnnt2d (ENSKMAG00000004908) dnm1l (ENSKMAG00000004994) ENSKMAG00000005089 dnajb9a (ENSKMAG00000005139) NRCAM (ENSKMAG00000005274) CNTN1 (ENSKMAG00000005644) PDZRN4 (ENSKMAG00000005705) GXYLT1 (ENSKMAG00000005749) YAF2 (ENSKMAG00000005787) PPHLN1 (ENSKMAG00000005806) prickle1a (ENSKMAG00000005861) ENSKMAG00000005935 ADAMTS20 (ENSKMAG00000005969) Turquoise killifish MODERN SPECIES 1622 NET1 (ENSNFUG00015022497) ENSNFUG00015022628 slc35b4 (ENSNFUG00015022625) ENSNFUG00015022635 GOLT1BB (ENSNFUG00015022644) LDHB (ENSNFUG00015022653) TMPOB (ENSNFUG00015022658) PTHLH (ENSNFUG00015022661) ENSNFUG00015022664 KCNA1 (ENSNFUG00015022665) CNOT4 (ENSNFUG00015022672) zgc:136858 (ENSNFUG00015022688) ENSNFUG00015022692 tnni4a (ENSNFUG00015022701) ENSNFUG00015022759 BPGM (ENSNFUG00015022761) ##22 tnnt2d (ENSNFUG00015022764) dnm1l (ENSNFUG00015022771) DNAJB9 (ENSNFUG00015022799) PNPLA8 (ENSNFUG00015022803) ENSNFUG00015022817 NRCAM (ENSNFUG00015022871) CNTN1 (ENSNFUG00015023371) PDZRN4 (ENSNFUG00015024360) ENSNFUG00015024374 GXYLT1B (ENSNFUG00015024376) YAF2 (ENSNFUG00015024379) ENSNFUG00015024381 ADAMTS20 (ENSNFUG00015024443) twf1a (ENSNFUG00015024697) IRAK4 (ENSNFUG00015024700) Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT00390000014507.a.a ENSGT01050000248182 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Poeciliinae ANCESTRAL SPECIES 3 ENSGT00390000014507.a.a ENSGT01050000248182 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Poecilia ANCESTRAL SPECIES 5 ENSGT00390000014507.a.a ENSGT01050000248182 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 NAME_6 ANCESTRAL SPECIES 31 ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792.e Amazon molly MODERN SPECIES 269 slc35b4 (ENSPFOG00000001828) golt1bb (ENSPFOG00000001939) ldhbb (ENSPFOG00000002013) tmpob (ENSPFOG00000002133) pthlhb (ENSPFOG00000002189) ENSPFOG00000020310 ENSPFOG00000022058 KCNA1 (ENSPFOG00000023573) CNOT4 (ENSPFOG00000002228) zgc:136858 (ENSPFOG00000002505) ENSPFOG00000002689 tnni4a (ENSPFOG00000002691) ENSPFOG00000002692 ENSPFOG00000002695 ENSPFOG00000002702 bpgm (ENSPFOG00000002708) ##22 CALD1 (ENSPFOG00000002752) tnnt2d (ENSPFOG00000002210) dnm1l (ENSPFOG00000002801) dnajb9a (ENSPFOG00000003137) PNPLA8 (ENSPFOG00000003149) NRCAM (ENSPFOG00000003287) CNTN1 (ENSPFOG00000004289) PDZRN4 (ENSPFOG00000005033) ENSPFOG00000023657 GXYLT1 (ENSPFOG00000005277) YAF2 (ENSPFOG00000005422) PPHLN1 (ENSPFOG00000005469) prickle1a (ENSPFOG00000005504) ENSPFOG00000005594 ADAMTS20 (ENSPFOG00000005633) Sailfin molly MODERN SPECIES 138 lgr4 (ENSPLAG00000001871) mybpc3 (ENSPLAG00000001818) ENSPLAG00000001794 KCNA1 (ENSPLAG00000001790) CNOT4 (ENSPLAG00000001780) zgc:136858 (ENSPLAG00000001763) ENSPLAG00000001751 tnni4a (ENSPLAG00000001747) ENSPLAG00000001740 ENSPLAG00000001733 ENSPLAG00000001729 bpgm (ENSPLAG00000001718) ##22 CALD1 (ENSPLAG00000001710) tnnt2d (ENSPLAG00000001701) dnm1l (ENSPLAG00000001690) dnajb9a (ENSPLAG00000001668) PNPLA8 (ENSPLAG00000001659) NRCAM (ENSPLAG00000001644) CNTN1 (ENSPLAG00000001621) Guppy MODERN SPECIES 458 golt1bb (ENSPREG00000008009) ENSPREG00000008015 ldhbb (ENSPREG00000008039) tmpob (ENSPREG00000008109) pthlhb (ENSPREG00000008124) ENSPREG00000008133 ENSPREG00000008147 KCNA1 (ENSPREG00000008157) CNOT4 (ENSPREG00000008171) zgc:136858 (ENSPREG00000008221) ENSPREG00000008257 tnni4a (ENSPREG00000008272) ENSPREG00000008289 ENSPREG00000008365 ENSPREG00000008493 bpgm (ENSPREG00000008515) ##22 tnnt2d (ENSPREG00000008538) dnm1l (ENSPREG00000008602) dnajb9a (ENSPREG00000008699) PNPLA8 (ENSPREG00000008719) NRCAM (ENSPREG00000008863) CNTN1 (ENSPREG00000009441) PDZRN4 (ENSPREG00000009526) GXYLT1 (ENSPREG00000009558) YAF2 (ENSPREG00000009617) PPHLN1 (ENSPREG00000009629) prickle1a (ENSPREG00000009636) ENSPREG00000009646 ADAMTS20 (ENSPREG00000009700) irak4 (ENSPREG00000009873) twf1a (ENSPREG00000009901) Platyfish MODERN SPECIES 11 golt1bb (ENSXMAG00000016953) ldhbb (ENSXMAG00000016966) ENSXMAG00000029981 tmpob (ENSXMAG00000016975) pthlhb (ENSXMAG00000016979) ENSXMAG00000016904 ENSXMAG00000019895 KCNA1 (ENSXMAG00000019897) CNOT4 (ENSXMAG00000016984) zgc:136858 (ENSXMAG00000016998) ENSXMAG00000025969 tnni4a (ENSXMAG00000025114) ENSXMAG00000024483 ENSXMAG00000017021 ENSXMAG00000026716 bpgm (ENSXMAG00000023031) ##22 tnnt2d (ENSXMAG00000017044) dnm1l (ENSXMAG00000017047) dnajb9a (ENSXMAG00000028221) ENSXMAG00000021559 NRCAM (ENSXMAG00000017134) CNTN1 (ENSXMAG00000017213) PDZRN4 (ENSXMAG00000029582) GXYLT1 (ENSXMAG00000017282) YAF2 (ENSXMAG00000025433) PPHLN1 (ENSXMAG00000029948) ENSXMAG00000028228 prickle1a (ENSXMAG00000017299) ENSXMAG00000021158 ADAMTS20 (ENSXMAG00000017324) irak4 (ENSXMAG00000028973) NAME_4 ANCESTRAL SPECIES 26 ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT01050000248182 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000175224 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Mummichog MODERN SPECIES 2447 chchd3b (ENSFHEG00000006911) slc35b4 (ENSFHEG00000006897) golt1bb (ENSFHEG00000006866) ldhbb (ENSFHEG00000006831) tmpob (ENSFHEG00000006728) pthlhb (ENSFHEG00000006716) ENSFHEG00000006696 KCNA1 (ENSFHEG00000006686) CNOT4 (ENSFHEG00000006608) zgc:136858 (ENSFHEG00000006533) ENSFHEG00000006438 tnni4a (ENSFHEG00000006404) ENSFHEG00000006396 ENSFHEG00000006387 ENSFHEG00000006369 bpgm (ENSFHEG00000006360) ##22 ENSFHEG00000006342 tnnt2d (ENSFHEG00000006322) dnm1l (ENSFHEG00000006283) ENSFHEG00000006099 dnajb9a (ENSFHEG00000006089) PNPLA8 (ENSFHEG00000006070) NRCAM (ENSFHEG00000006042) CNTN1 (ENSFHEG00000005703) GXYLT1 (ENSFHEG00000005428) YAF2 (ENSFHEG00000005397) PPHLN1 (ENSFHEG00000005379) prickle1a (ENSFHEG00000005349) ENSFHEG00000005273 Sheepshead minnow MODERN SPECIES 632 slc35b4 (ENSCVAG00000009266) golt1bb (ENSCVAG00000009272) ENSCVAG00000009288 ldhbb (ENSCVAG00000009309) tmpob (ENSCVAG00000009330) pthlhb (ENSCVAG00000009336) ENSCVAG00000009343 KCNA1 (ENSCVAG00000009347) CNOT4 (ENSCVAG00000009399) zgc:136858 (ENSCVAG00000009439) ENSCVAG00000009456 tnni4a (ENSCVAG00000009468) ENSCVAG00000009474 ENSCVAG00000009490 ENSCVAG00000009510 bpgm (ENSCVAG00000009514) ##22 tnnt2d (ENSCVAG00000009633) dnm1l (ENSCVAG00000009840) Oryzias ANCESTRAL SPECIES 16 ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000175224 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b Oryzias_b ANCESTRAL SPECIES ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164736 ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000175224 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b.c ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b Indian medaka MODERN SPECIES 15 chchd3b (ENSOMEG00000011347) slc35b4 (ENSOMEG00000011299) ldhbb (ENSOMEG00000011239) tmpob (ENSOMEG00000011188) pthlhb (ENSOMEG00000011153) ENSOMEG00000011146 ENSOMEG00000011129 KCNA1 (ENSOMEG00000011109) CNOT4 (ENSOMEG00000011084) zgc:136858 (ENSOMEG00000011025) ENSOMEG00000010987 tnni4a (ENSOMEG00000010945) ENSOMEG00000010901 ENSOMEG00000010797 ENSOMEG00000010772 bpgm (ENSOMEG00000010725) ##22 ENSOMEG00000010686 tnnt2d (ENSOMEG00000010502) dnm1l (ENSOMEG00000010635) ENSOMEG00000010476 ENSOMEG00000010365 CNTN1 (ENSOMEG00000010258) PDZRN4 (ENSOMEG00000010211) GXYLT1 (ENSOMEG00000010162) YAF2 (ENSOMEG00000010094) PPHLN1 (ENSOMEG00000010079) prickle1a (ENSOMEG00000010059) ENSOMEG00000010016 ADAMTS20 (ENSOMEG00000009983) irak4 (ENSOMEG00000009757) twf1a (ENSOMEG00000009732) Javanese ricefish MODERN SPECIES 20 chchd3b (ENSOJAG00000000345) slc35b4 (ENSOJAG00000000339) ENSOJAG00000000331 golt1bb (ENSOJAG00000000317) ENSOJAG00000000303 ldhbb (ENSOJAG00000000294) tmpob (ENSOJAG00000000281) pthlhb (ENSOJAG00000000274) ENSOJAG00000000271 KCNA1 (ENSOJAG00000000266) CNOT4 (ENSOJAG00000000245) zgc:136858 (ENSOJAG00000000205) ENSOJAG00000000125 ENSOJAG00000022616 ENSOJAG00000022607 bpgm (ENSOJAG00000022606) ##22 ENSOJAG00000022603 tnnt2d (ENSOJAG00000022590) dnm1l (ENSOJAG00000022533) ENSOJAG00000022436 NRCAM (ENSOJAG00000019980) CNTN1 (ENSOJAG00000018970) ENSOJAG00000018907 ENSOJAG00000018889 PDZRN4 (ENSOJAG00000018862) GXYLT1 (ENSOJAG00000018836) YAF2 (ENSOJAG00000018820) prickle1a (ENSOJAG00000018801) ENSOJAG00000018778 ADAMTS20 (ENSOJAG00000017500) irak4 (ENSOJAG00000017320) Oryzias_a ANCESTRAL SPECIES 1 ENSGT00940000155849.g ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000155533.d.r ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b Japanese Medaka HdrR MODERN SPECIES 20 slc35b4 (ENSORLG00000003802) golt1bb (ENSORLG00000003792) ENSORLG00000023935 ldhbb (ENSORLG00000022136) tmpob (ENSORLG00000003751) pthlhb (ENSORLG00000025229) ENSORLG00000003741 ENSORLG00000003738 ENSORLG00000003735 CNOT4 (ENSORLG00000003727) zgc:136858 (ENSORLG00000003706) ENSORLG00000029963 tnni4a (ENSORLG00000030419) ENSORLG00000003693 ENSORLG00000003676 bpgm (ENSORLG00000003667) ##22 tnnt2d (ENSORLG00000003649) dnm1l (ENSORLG00000003624) DNAH5 (ENSORLG00000003542) ENSORLG00000003382 ENSORLG00000003354 CNTN1 (ENSORLG00000003308) PDZRN4 (ENSORLG00000003283) GXYLT1 (ENSORLG00000003267) ENSORLG00000025720 ENSORLG00000024063 ENSORLG00000026898 ENSORLG00000022854 ENSORLG00000023834 YAF2 (ENSORLG00000003255) PPHLN1 (ENSORLG00000003241) Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Pomacentridae ANCESTRAL SPECIES 1 ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00950000182857.a.a.b.b ENSGT00390000007126 ENSGT00940000162677 ENSGT00530000063576.A ENSGT00390000005941.d Pomacentridae_A ANCESTRAL SPECIES 9 ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000162649.f.b.d ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00950000182857.a.a.b.b ENSGT00390000007126 ENSGT00940000162677 ENSGT00530000063576.A ENSGT00390000005941.d Amphiprion ANCESTRAL SPECIES 4 ENSGT00940000177912 ENSGT00940000153525.i.b ENSGT00940000162649.f.b.d.c ENSGT00940000162649.f.b.d.d ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00950000183129.a.f ENSGT00950000182857.a.a.b.b ENSGT00390000007126.e ENSGT00940000162677 ENSGT00530000063576.A Clown anemonefish MODERN SPECIES 707 ENSAOCG00000010845 KCNA1 (ENSAOCG00000010828) CNOT4 (ENSAOCG00000010792) zgc:136858 (ENSAOCG00000010735) ENSAOCG00000010680 ENSAOCG00000010646 tnni4a (ENSAOCG00000010625) ENSAOCG00000010561 ENSAOCG00000000643 bpgm (ENSAOCG00000010343) ##22 ENSAOCG00000010325 tnnt2d (ENSAOCG00000010295) dnm1l (ENSAOCG00000010262) dnajb9a (ENSAOCG00000010215) PNPLA8 (ENSAOCG00000010204) NRCAM (ENSAOCG00000010166) CNTN1 (ENSAOCG00000009886) PDZRN4 (ENSAOCG00000009846) Orange clownfish MODERN SPECIES 18 ENSAPEG00000003666 ldhbb (ENSAPEG00000003841) ENSAPEG00000003879 ENSAPEG00000004069 tmpob (ENSAPEG00000004590) pthlhb (ENSAPEG00000004595) ENSAPEG00000004610 ENSAPEG00000004622 KCNA1 (ENSAPEG00000004635) CNOT4 (ENSAPEG00000004680) zgc:136858 (ENSAPEG00000004724) ENSAPEG00000004806 tnni4a (ENSAPEG00000004854) ENSAPEG00000004911 ENSAPEG00000005086 bpgm (ENSAPEG00000005108) ##22 CALD1 (ENSAPEG00000005119) tnnt2d (ENSAPEG00000005151) dnm1l (ENSAPEG00000005223) dnajb9a (ENSAPEG00000005364) ENSAPEG00000005407 NRCAM (ENSAPEG00000005494) CNTN1 (ENSAPEG00000005725) PDZRN4 (ENSAPEG00000005775) GXYLT1 (ENSAPEG00000005812) YAF2 (ENSAPEG00000005856) parp16 (ENSAPEG00000005885) ifitm5 (ENSAPEG00000005898) ENSAPEG00000005914 cdkn1ca (ENSAPEG00000005955) ptdss2 (ENSAPEG00000005973) Spiny chromis MODERN SPECIES 141 ALDH1L2 (ENSAPOG00000000452) pthlhb (ENSAPOG00000016163) ENSAPOG00000016181 KCNA1 (ENSAPOG00000016187) ENSAPOG00000016198 CNOT4 (ENSAPOG00000016272) zgc:136858 (ENSAPOG00000016393) ENSAPOG00000016427 ENSAPOG00000016449 ENSAPOG00000016478 bpgm (ENSAPOG00000016493) ##22 ENSAPOG00000016511 ENSAPOG00000016532 tnnt2d (ENSAPOG00000016573) dnm1l (ENSAPOG00000016682) dnajb9a (ENSAPOG00000016699) ENSAPOG00000016711 NRCAM (ENSAPOG00000016917) CNTN1 (ENSAPOG00000016941) PDZRN4 (ENSAPOG00000016980) GXYLT1 (ENSAPOG00000017039) YAF2 (ENSAPOG00000016986) ifitm5 (ENSAPOG00000017051) ENSAPOG00000017126 cdkn1ca (ENSAPOG00000017162) Bicolor damselfish MODERN SPECIES 1217 ldhbb (ENSSPAG00000012436) tmpob (ENSSPAG00000012406) pthlhb (ENSSPAG00000012395) ENSSPAG00000012390 KCNA1 (ENSSPAG00000012387) CNOT4 (ENSSPAG00000012329) zgc:136858 (ENSSPAG00000012273) ENSSPAG00000012226 ENSSPAG00000012204 ENSSPAG00000012175 ENSSPAG00000012160 bpgm (ENSSPAG00000012146) ##22 ENSSPAG00000012130 tnnt2d (ENSSPAG00000012090) dnm1l (ENSSPAG00000012049) dnajb9a (ENSSPAG00000012033) ENSSPAG00000012015 Cichlidae ANCESTRAL SPECIES 5 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Haplochromini ANCESTRAL SPECIES ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a.e.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 Burton s mouthbrooder MODERN SPECIES 542 chchd3b (ENSHBUG00000002205) slc35b4 (ENSHBUG00000002193) golt1bb (ENSHBUG00000002179) ldhbb (ENSHBUG00000002168) tmpob (ENSHBUG00000002160) pthlhb (ENSHBUG00000002154) ENSHBUG00000002148 CNOT4 (ENSHBUG00000000027) zgc:136858 (ENSHBUG00000002096) ENSHBUG00000002071 ENSHBUG00000002059 ENSHBUG00000000025 ENSHBUG00000002040 bpgm (ENSHBUG00000002034) ##22 CALD1 (ENSHBUG00000000020) tnnt2d (ENSHBUG00000001979) dnm1l (ENSHBUG00000001952) dnajb9a (ENSHBUG00000001914) ENSHBUG00000001910 NRCAM (ENSHBUG00000001859) CNTN1 (ENSHBUG00000001731) PDZRN4 (ENSHBUG00000001717) GXYLT1 (ENSHBUG00000001705) YAF2 (ENSHBUG00000001690) PPHLN1 (ENSHBUG00000001684) prickle1a (ENSHBUG00000001677) ENSHBUG00000001665 ADAMTS20 (ENSHBUG00000001654) Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a.e.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b P. nyererei MODERN SPECIES 322 ENSPNYG00000002707 NET1 (ENSPNYG00000002745) slc35b4 (ENSPNYG00000002843) golt1bb (ENSPNYG00000002882) ldhbb (ENSPNYG00000002953) tmpob (ENSPNYG00000004229) pthlhb (ENSPNYG00000004239) ENSPNYG00000004251 KCNA1 (ENSPNYG00000004255) CNOT4 (ENSPNYG00000004276) zgc:136858 (ENSPNYG00000004314) ENSPNYG00000004344 ENSPNYG00000004373 ENSPNYG00000004391 ENSPNYG00000004430 bpgm (ENSPNYG00000004447) ##22 tnnt2d (ENSPNYG00000004458) dnm1l (ENSPNYG00000004502) dnajb9a (ENSPNYG00000004724) ENSPNYG00000004741 NRCAM (ENSPNYG00000004759) CNTN1 (ENSPNYG00000004847) PDZRN4 (ENSPNYG00000005050) GXYLT1 (ENSPNYG00000005077) YAF2 (ENSPNYG00000005107) PPHLN1 (ENSPNYG00000005128) prickle1a (ENSPNYG00000005140) ENSPNYG00000005157 ADAMTS20 (ENSPNYG00000005239) irak4 (ENSPNYG00000005723) twf1a (ENSPNYG00000005936) Haplochromini_B ANCESTRAL SPECIES 20 ENSGT00390000000903.a.j ENSGT00390000002915 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT01030000234588.b.b.b.a.a.a.b ENSGT01030000234588.b.b.b.a.a.a.a ENSGT00950000182926.a ##22 ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a.e.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.b ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT00940000170627 ENSGT00940000158636 ENSGT00940000158792 ENSGT00530000063868.b Eastern happy MODERN SPECIES 19 ENSACLG00000002767 slc35b4 (ENSACLG00000002691) golt1bb (ENSACLG00000002654) ldhbb (ENSACLG00000002635) tmpob (ENSACLG00000002624) pthlhb (ENSACLG00000002618) ENSACLG00000002585 ENSACLG00000002561 KCNA1 (ENSACLG00000002552) CNOT4 (ENSACLG00000002514) zgc:136858 (ENSACLG00000002477) ENSACLG00000002447 tnni4a (ENSACLG00000002420) ENSACLG00000002341 ENSACLG00000002089 bpgm (ENSACLG00000002071) ##22 tnnt2d (ENSACLG00000001473) dnm1l (ENSACLG00000001401) dnajb9a (ENSACLG00000001384) ENSACLG00000001359 NRCAM (ENSACLG00000000954) CNTN1 (ENSACLG00000000904) PDZRN4 (ENSACLG00000000551) ENSACLG00000000539 GXYLT1 (ENSACLG00000000481) YAF2 (ENSACLG00000000456) PPHLN1 (ENSACLG00000000449) prickle1a (ENSACLG00000000425) ENSACLG00000000409 ADAMTS20 (ENSACLG00000000156) irak4 (ENSACLG00000000097) Zebra mbuna MODERN SPECIES 1110 chchd3b (ENSMZEG00005007147) slc35b4 (ENSMZEG00005007167) golt1bb (ENSMZEG00005007199) ldhbb (ENSMZEG00005007213) tmpob (ENSMZEG00005007239) pthlhb (ENSMZEG00005007256) ENSMZEG00005007266 ENSMZEG00005007273 KCNA1 (ENSMZEG00005007277) CNOT4 (ENSMZEG00005007312) zgc:136858 (ENSMZEG00005007356) ENSMZEG00005007402 tnni4a (ENSMZEG00005007450) ENSMZEG00005007456 ENSMZEG00005007465 bpgm (ENSMZEG00005007479) ##22 tnnt2d (ENSMZEG00005007504) dnm1l (ENSMZEG00005007753) dnajb9a (ENSMZEG00005007813) ENSMZEG00005007830 NRCAM (ENSMZEG00005007891) CNTN1 (ENSMZEG00005008112) ENSMZEG00005008199 PDZRN4 (ENSMZEG00005008227) GXYLT1 (ENSMZEG00005008242) YAF2 (ENSMZEG00005008258) prickle1a (ENSMZEG00005008270) ENSMZEG00005008290 ADAMTS20 (ENSMZEG00005008339) irak4 (ENSMZEG00005008598) twf1a (ENSMZEG00005008622) Lyretail cichlid MODERN SPECIES 293 ENSNBRG00000021304 slc35b4 (ENSNBRG00000021280) golt1bb (ENSNBRG00000021222) ldhbb (ENSNBRG00000021207) tmpob (ENSNBRG00000021195) pthlhb (ENSNBRG00000021185) ENSNBRG00000021178 ENSNBRG00000021177 KCNA1 (ENSNBRG00000021172) CNOT4 (ENSNBRG00000021144) zgc:136858 (ENSNBRG00000021096) ENSNBRG00000021081 tnni4a (ENSNBRG00000021067) ENSNBRG00000021050 ENSNBRG00000021031 bpgm (ENSNBRG00000021024) ##22 ENSNBRG00000021005 tnnt2d (ENSNBRG00000020994) dnm1l (ENSNBRG00000020969) dnajb9a (ENSNBRG00000020956) ENSNBRG00000020948 NRCAM (ENSNBRG00000020897) CNTN1 (ENSNBRG00000020792) ENSNBRG00000020773 PDZRN4 (ENSNBRG00000020749) GXYLT1 (ENSNBRG00000020710) YAF2 (ENSNBRG00000020680) PPHLN1 (ENSNBRG00000020669) prickle1a (ENSNBRG00000020651) ENSNBRG00000020637 ADAMTS20 (ENSNBRG00000019988) Nile tilapia MODERN SPECIES 19 NET1 (ENSONIG00000008633) chchd3b (ENSONIG00000028078) slc35b4 (ENSONIG00000030209) golt1bb (ENSONIG00000008642) ldhbb (ENSONIG00000008643) tmpob (ENSONIG00000032413) pthlhb (ENSONIG00000042695) ENSONIG00000021089 ENSONIG00000021090 CNOT4 (ENSONIG00000008656) zgc:136858 (ENSONIG00000008662) ENSONIG00000028524 ENSONIG00000008665 ENSONIG00000037691 ENSONIG00000029190 bpgm (ENSONIG00000038991) ##22 tnnt2d (ENSONIG00000008670) dnm1l (ENSONIG00000008672) dnajb9a (ENSONIG00000041184) ENSONIG00000008681 NRCAM (ENSONIG00000008686) CNTN1 (ENSONIG00000008695) PDZRN4 (ENSONIG00000008705) GXYLT1 (ENSONIG00000008707) YAF2 (ENSONIG00000008709) PPHLN1 (ENSONIG00000025900) prickle1a (ENSONIG00000008712) ENSONIG00000021092 ADAMTS20 (ENSONIG00000008715) irak4 (ENSONIG00000008733) twf1a (ENSONIG00000008739) Midas cichlid MODERN SPECIES 108 slc35b4 (ENSACIG00000003198) golt1bb (ENSACIG00000003117) ldhbb (ENSACIG00000003094) tmpob (ENSACIG00000003078) pthlhb (ENSACIG00000003066) ENSACIG00000003061 ENSACIG00000003049 KCNA1 (ENSACIG00000003044) CNOT4 (ENSACIG00000003011) zgc:136858 (ENSACIG00000002966) ENSACIG00000002933 ENSACIG00000002926 ENSACIG00000002911 ENSACIG00000002893 bpgm (ENSACIG00000002886) ##22 tnnt2d (ENSACIG00000002862) dnm1l (ENSACIG00000002828) dnajb9a (ENSACIG00000002817) ENSACIG00000002797 NRCAM (ENSACIG00000002744) CNTN1 (ENSACIG00000002688) PDZRN4 (ENSACIG00000002668) GXYLT1 (ENSACIG00000002649) YAF2 (ENSACIG00000002635) ENSACIG00000002610 prickle1a (ENSACIG00000002591) ENSACIG00000002579 ADAMTS20 (ENSACIG00000002491) irak4 (ENSACIG00000002462) twf1a (ENSACIG00000002443) Pinecone sodierfish MODERN SPECIES 20 golt1bb (ENSMMDG00005022012) ENSMMDG00005022014 ldhbb (ENSMMDG00005022017) slc25a3b (ENSMMDG00005022022) tmpob (ENSMMDG00005022032) pthlhb (ENSMMDG00005022033) ENSMMDG00005022038 KCNA1 (ENSMMDG00005022042) CNOT4 (ENSMMDG00005022049) zgc:136858 (ENSMMDG00005022097) ENSMMDG00005022105 tnni4a (ENSMMDG00005022107) ENSMMDG00005000116 ENSMMDG00005000125 ENSMMDG00005000128 bpgm (ENSMMDG00005000142) ##22 tnnt2d (ENSMMDG00005000172) dnm1l (ENSMMDG00005000248) dnajb9a (ENSMMDG00005000306) ENSMMDG00005000313 NRCAM (ENSMMDG00005000496) CNTN1 (ENSMMDG00005001022) PDZRN4 (ENSMMDG00005001054) GXYLT1 (ENSMMDG00005001060) YAF2 (ENSMMDG00005001063) PPHLN1 (ENSMMDG00005001065) prickle1a (ENSMMDG00005001069) ENSMMDG00005001071 ADAMTS20 (ENSMMDG00005001076) irak4 (ENSMMDG00005001094) twf1a (ENSMMDG00005001693) Cod MODERN SPECIES 22 ENSGMOG00000016539 ENSGMOG00000026582 slc35b4 (ENSGMOG00000001429) golt1bb (ENSGMOG00000001414) ldhbb (ENSGMOG00000001392) tmpob (ENSGMOG00000033733) pthlhb (ENSGMOG00000001359) ENSGMOG00000022272 ENSGMOG00000001351 ENSGMOG00000019796 ENSGMOG00000034360 zgc:136858 (ENSGMOG00000001299) ENSGMOG00000001224 ENSGMOG00000001148 ENSGMOG00000001131 bpgm (ENSGMOG00000023831) ##22 ENSGMOG00000030388 tnnt2d (ENSGMOG00000001057) dnm1l (ENSGMOG00000001033) dnajb9a (ENSGMOG00000036854) ENSGMOG00000028053 NRCAM (ENSGMOG00000000846) CNTN1 (ENSGMOG00000000812) PDZRN4 (ENSGMOG00000030299) GXYLT1 (ENSGMOG00000000771) YAF2 (ENSGMOG00000000765) PRICKLE1 (ENSGMOG00000000750) ENSGMOG00000019794 ENSGMOG00000009177 ADAMTS20 (ENSGMOG00000009121) irak4 (ENSGMOG00000009110) Protacanthopterygii ANCESTRAL SPECIES 10 ENSGT00390000014507.a.a.h ENSGT00390000014507.a.a.g ENSGT00940000153525.i.b ENSGT00390000008708.a ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000160916 ENSGT00940000159286.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.k.a ENSGT00940000156246.c.a ENSGT00940000154738.a.q ENSGT00940000155419.c.a.g ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.a.c ENSGT00390000016228.a.b ENSGT00940000157529.i.a ENSGT01010000222986 ENSGT00390000014700.b.a.a ENSGT00940000157816.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 171 ENSGT00390000002915.e ENSGT00390000014507.a.a.h ENSGT00940000153525.i.b.f ENSGT00390000008708.a.b ENSGT00940000154098.a.e.i ENSGT00390000004933.k.b.d ENSGT00940000160916 ENSGT00940000164299.b.b.a ENSGT00940000158576.a.b.a ENSGT00390000000068.a.b.d ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b.b ENSGT01030000234588.b.b.b.a.b.g ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a.o ##22 ENSGT00940000154709.a.b.b.c.c ENSGT00940000155504.k.a.c ENSGT00940000156246.c.a.c ENSGT00940000154738.a.q.c ENSGT00940000155419.c.a.h ENSGT00940000155915.a.d ENSGT00950000183062.a.a.b.b.b.f ENSGT00390000013995.b.b.k.a.c.a ENSGT00390000016228.a.b.b ENSGT00940000157529.i.a.f ENSGT01010000222986.a ENSGT00390000014700.b.a.a Salmoninae_a ANCESTRAL SPECIES 65 ENSGT00390000002915.e ENSGT00390000014507.a.a.h ENSGT00940000153525.i.b.f ENSGT00390000008708.a.b ENSGT00940000154098.a.e.i ENSGT00390000004933.k.b.d ENSGT00940000160916 ENSGT00940000164299.b.b.a ENSGT00940000158576.a.b.a ENSGT00390000000068.a.b.d ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b.b ENSGT01030000234588.b.b.b.a.b.g ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a.o ##22 ENSGT00940000154709.a.b.b.c.c ENSGT00940000155504.k.a.c ENSGT00940000156246.c.a.c ENSGT00940000154738.a.q.c ENSGT00940000155419.c.a.h ENSGT00940000155915.a.d ENSGT00950000183062.a.a.b.b.b.f ENSGT00390000013995.b.b.k.a.c.a ENSGT00390000016228.a.b.b ENSGT00940000157529.i.a.f ENSGT01010000222986.a ENSGT00390000014700.b.a.a ENSGT00940000159763.o ENSGT00940000157816.a.a.a ENSGT00940000158825.d.a Salmo ANCESTRAL SPECIES 60 ENSGT00390000002915.e ENSGT00390000014507.a.a.h ENSGT00940000153525.i.b.f ENSGT00390000008708.a.b ENSGT00940000154098.a.e.i ENSGT00390000004933.k.b.d ENSGT00940000160916 ENSGT00940000164299.b.b.a ENSGT00940000158576.a.b.a ENSGT00390000000068.a.b.d ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b.b ENSGT01030000234588.b.b.b.a.b.g ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a.o ##22 ENSGT00940000154709.a.b.b.c.c ENSGT00940000155504.k.a.c ENSGT00940000156246.c.a.c ENSGT00940000154738.a.q.c ENSGT00940000155419.c.a.h ENSGT00940000155915.a.d ENSGT00950000183062.a.a.b.b.b.f ENSGT00390000013995.b.b.k.a.c.a ENSGT00940000168203.a.a ENSGT00940000157529.i.a.f ENSGT01010000222986.a ENSGT00390000014700.b.a.a ENSGT00940000159763.o ENSGT00940000157816.a.a.a ENSGT00940000158825.d.a Atlantic salmon MODERN SPECIES 1 chchd3b (ENSSSAG00000079607) golt1bb (ENSSSAG00000082709) ldhbb (ENSSSAG00000071409) slc25a3b (ENSSSAG00000079558) tmpob (ENSSSAG00000079549) ENSSSAG00000095361 pthlhb (ENSSSAG00000111398) ENSSSAG00000079511 ENSSSAG00000113251 ENSSSAG00000121992 ENSSSAG00000079490 zgc:136858 (ENSSSAG00000079479) ENSSSAG00000079473 ENSSSAG00000079470 ENSSSAG00000079469 bpgm (ENSSSAG00000120740) ##22 tnnt2d (ENSSSAG00000079466) dnm1l (ENSSSAG00000078961) dnajb9a (ENSSSAG00000101678) ENSSSAG00000078845 NRCAM (ENSSSAG00000077488) CNTN1 (ENSSSAG00000075823) ENSSSAG00000085342 YAF2 (ENSSSAG00000121965) ENSSSAG00000075773 ENSSSAG00000075776 ENSSSAG00000075764 ric8a (ENSSSAG00000075692) TPCN2 (ENSSSAG00000075685) TPCN2 (ENSSSAG00000119661) TPCN2 (ENSSSAG00000101120) River trout MODERN SPECIES 37 chchd3b (ENSSTUG00000014101) slc35b4 (ENSSTUG00000014039) golt1bb (ENSSTUG00000014009) slc25a3b (ENSSTUG00000051258) tmpob (ENSSTUG00000051257) pthlhb (ENSSTUG00000051256) ENSSTUG00000051255 ENSSTUG00000051254 KCNA1 (ENSSTUG00000051253) CNOT4 (ENSSTUG00000051252) zgc:136858 (ENSSTUG00000051251) ENSSTUG00000051250 tnni4a (ENSSTUG00000051249) ENSSTUG00000051248 tnni4b.2 (ENSSTUG00000051247) bpgm (ENSSTUG00000051246) ##22 tnnt2d (ENSSTUG00000051245) dnm1l (ENSSTUG00000051244) ENSSTUG00000051243 NRCAM (ENSSTUG00000051155) CNTN1 (ENSSTUG00000051085) ENSSTUG00000051080 ENSSTUG00000051079 YAF2 (ENSSTUG00000051078) ENSSTUG00000051077 PRICKLE1 (ENSSTUG00000051076) ENSSTUG00000051075 ric8a (ENSSTUG00000051074) ENSSTUG00000051073 CCND1 (ENSSTUG00000051072) FGF4 (ENSSTUG00000051071) Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00390000000903.a.j ENSGT00390000002915.e ENSGT00390000014507.a.a.h ENSGT00390000008708.a.b ENSGT00940000154098.a.e.i ENSGT00390000004933.k.b.d ENSGT00940000160916 ENSGT00940000164299.b.b.a ENSGT00940000158576.a.b.a ENSGT00390000000068.a.b.d ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b.b ENSGT01030000234588.b.b.b.a.b.g ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a.o ##22 ENSGT00940000154709.a.b.b.c.c ENSGT00940000155504.k.a.c ENSGT00940000156246.c.a.c ENSGT00940000154738.a.q.c ENSGT00940000155419.c.a.h ENSGT00940000155915.a.d ENSGT01080000258033.b ENSGT00950000183062.a.a.b.b.b.f ENSGT00390000013995.b.b.k.a.c.a ENSGT00390000016228.a.b.b ENSGT00940000157529.i.a.f ENSGT01010000222986.a ENSGT00390000014700.b.a.a ENSGT00940000159763.o ENSGT00940000157816.a.a.a Rainbow trout MODERN SPECIES 11 golt1bb (ENSOMYG00000009361) slc25a3b (ENSOMYG00000009202) tmpob (ENSOMYG00000009068) pthlhb (ENSOMYG00000052478) ENSOMYG00000008988 ENSOMYG00000008920 ENSOMYG00000008911 ENSOMYG00000008877 zgc:136858 (ENSOMYG00000008802) ENSOMYG00000048948 ENSOMYG00000067016 ENSOMYG00000008715 ENSOMYG00000008691 ENSOMYG00000008682 tnni4b.2 (ENSOMYG00000008671) bpgm (ENSOMYG00000008621) ##22 tnnt2d (ENSOMYG00000008532) dnm1l (ENSOMYG00000008421) dnajb9a (ENSOMYG00000063751) ENSOMYG00000008104 ENSOMYG00000057517 NRCAM (ENSOMYG00000007983) CNTN1 (ENSOMYG00000007478) ENSOMYG00000064508 PDZRN4 (ENSOMYG00000006668) YAF2 (ENSOMYG00000006598) PPHLN1 (ENSOMYG00000006575) PRICKLE1 (ENSOMYG00000006515) ENSOMYG00000006496 ENSOMYG00000006457 ENSOMYG00000054271 Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00390000000903.a.j ENSGT00390000002915.e ENSGT00390000014507.a.a.h ENSGT00390000008708.a.b ENSGT00940000154098.a.e.i ENSGT00390000004933.k.b.d ENSGT00940000160916 ENSGT00940000164299.b.b.a ENSGT00940000158576.a.b.a ENSGT00390000000068.a.b.d ENSGT00390000007427 ENSGT00940000159018.d ENSGT01030000234588.b.b.b.a.a.b.b.b ENSGT01030000234588.b.b.b.a.b.g ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a.o ##22 ENSGT00940000154709.a.b.b.c.c ENSGT00940000155504.k.a.c ENSGT00940000156246.c.a.c ENSGT00940000154738.a.q.c ENSGT00940000155419.c.a.h ENSGT00940000155915.a.d ENSGT01080000258033.b ENSGT00950000183062.a.a.b.b.b.f ENSGT00390000013995.b.b.k.a.c.a ENSGT00390000016228.a.b.b ENSGT00940000157529.i.a.f ENSGT01010000222986.a ENSGT00390000014700.b.a.a ENSGT00940000157816.a.a.a ENSGT00940000158825.d.a Coho salmon MODERN SPECIES 14 slc35b4 (ENSOKIG00005016494) golt1bb (ENSOKIG00005016467) slc25a3b (ENSOKIG00005016396) tmpob (ENSOKIG00005016372) ENSOKIG00005016360 pthlhb (ENSOKIG00005016357) ENSOKIG00005016181 ENSOKIG00005016167 KCNA1 (ENSOKIG00005016156) CNOT4 (ENSOKIG00005016111) zgc:136858 (ENSOKIG00005016086) ENSOKIG00005016072 tnni4a (ENSOKIG00005016061) ENSOKIG00005016053 tnni4b.2 (ENSOKIG00005015961) bpgm (ENSOKIG00005015943) ##22 tnnt2d (ENSOKIG00005015934) ENSOKIG00005015928 dnm1l (ENSOKIG00005015703) ENSOKIG00005015144 NRCAM (ENSOKIG00005012642) CNTN1 (ENSOKIG00005011606) ENSOKIG00005011460 PDZRN4 (ENSOKIG00005011445) ENSOKIG00005011437 YAF2 (ENSOKIG00005011425) PPHLN1 (ENSOKIG00005011412) PRICKLE1 (ENSOKIG00005011404) ENSOKIG00005011399 ENSOKIG00005011389 ric8a (ENSOKIG00005011374) Chinook salmon MODERN SPECIES 10 chchd3b (ENSOTSG00005002714) slc35b4 (ENSOTSG00005002559) golt1bb (ENSOTSG00005002556) slc25a3b (ENSOTSG00005002470) tmpob (ENSOTSG00005002461) pthlhb (ENSOTSG00005002457) AGBL3 (ENSOTSG00005002448) ENSOTSG00005002441 KCNA1 (ENSOTSG00005002438) CNOT4 (ENSOTSG00005002413) zgc:136858 (ENSOTSG00005002403) ENSOTSG00005002397 tnni4a (ENSOTSG00005002083) ENSOTSG00005026375 tnni4b.2 (ENSOTSG00005026374) bpgm (ENSOTSG00005026373) ##22 tnnt2d (ENSOTSG00005026372) dnm1l (ENSOTSG00005026295) dnajb9a (ENSOTSG00005026291) ENSOTSG00005026288 ENSOTSG00005026285 ENSOTSG00005024758 NRCAM (ENSOTSG00005024072) PDZRN4 (ENSOTSG00005024063) YAF2 (ENSOTSG00005024058) PPHLN1 (ENSOTSG00005024056) ENSOTSG00005024054 prickle1a (ENSOTSG00005024053) ENSOTSG00005024052 tmem179ba (ENSOTSG00005024045) ENSOTSG00005024043 Huchen MODERN SPECIES 1737 ENSHHUG00000043534 bpgm (ENSHHUG00000043527) ##22 ENSHHUG00000043519 tnnt2d (ENSHHUG00000043515) dnm1l (ENSHHUG00000043459) dnajb9a (ENSHHUG00000043455) PNPLA8 (ENSHHUG00000043439) Salmoninae ANCESTRAL SPECIES 344 ENSGT00940000155461.E.k ENSGT00710000106806.k ENSGT00950000182994.B.a.b.pb.a ENSGT00530000063735.b.g ENSGT00390000002915.f ENSGT00390000014507.a.a.g ENSGT00940000153525.i.b.e ENSGT00390000008708.a.a ENSGT00940000154098.a.e.j ENSGT00390000004933.k.b.c ENSGT00940000159286.a.a ENSGT00940000164299.b.b.b ENSGT00940000158576.a.b.b ENSGT00390000000068.a.b.c ENSGT01030000234588.b.b.b.a.b.h ENSGT00950000182926.a.p ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c.d ENSGT00940000155504.k.a.d ENSGT00940000156246.c.a.d ENSGT00940000154738.a.q.d ENSGT00940000155419.c.a.g.b ENSGT00940000155915.a.c ENSGT00950000183062.a.a.b.b.b.e ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.a.c.b ENSGT00390000016228.a.b.a ENSGT00940000157529.i.a.e ENSGT01010000222986.b Salmoninae_a ANCESTRAL SPECIES 83 ENSGT00940000155461.E.k ENSGT00710000106806.k ENSGT00950000182994.B.a.b.pb.a ENSGT00530000063735.b.g ENSGT00390000002915.f ENSGT00390000014507.a.a.g ENSGT00940000153525.i.b.e ENSGT00390000008708.a.a ENSGT00940000154098.a.e.j ENSGT00390000004933.k.b.c ENSGT00940000159286.a.a ENSGT00940000164299.b.b.b ENSGT00940000158576.a.b.b ENSGT00390000000068.a.b.c ENSGT01030000234588.b.b.b.a.b.h ENSGT00950000182926.a.p ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c.d ENSGT00940000155504.k.a.d ENSGT00940000156246.c.a.d ENSGT00940000154738.a.q.d ENSGT00940000155419.c.a.g.b ENSGT00940000155915.a.c ENSGT00950000183062.a.a.b.b.b.e ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.a.c.b ENSGT00940000168203.a.b ENSGT00390000016228.a.b.a ENSGT00940000157529.i.a.e ENSGT01010000222986.b ENSGT00940000157816.a.a.b Salmo ANCESTRAL SPECIES 65 ENSGT00940000155461.E.k ENSGT00710000106806.k ENSGT00950000182994.B.a.b.pb.a ENSGT00530000063735.b.g ENSGT00390000002915.f ENSGT00390000014507.a.a.g ENSGT00940000153525.i.b.e ENSGT00390000008708.a.a ENSGT00940000154098.a.e.j ENSGT00390000004933.k.b.c ENSGT00940000159286.a.a ENSGT00940000164299.b.b.b ENSGT00940000158576.a.b.b ENSGT00390000000068.a.b.c ENSGT01030000234588.b.b.b.a.b.h ENSGT00950000182926.a.p ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c.d ENSGT00940000155504.k.a.d ENSGT00940000156246.c.a.d ENSGT00940000154738.a.q.d ENSGT00940000155419.c.a.g.b ENSGT00940000155915.a.c ENSGT00950000183062.a.a.b.b.b.e ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.a.c.b ENSGT00940000168203.a.b ENSGT00940000157529.i.a.e ENSGT01010000222986.b ENSGT00940000157816.a.a.b ENSGT00940000158825.d.b Atlantic salmon MODERN SPECIES 7 ENSSSAG00000070691 ENSSSAG00000071282 ENSSSAG00000071286 ENSSSAG00000071368 s35b4 (ENSSSAG00000071379) golt1bb (ENSSSAG00000117298) ldhbb (ENSSSAG00000121286) slc25a3b (ENSSSAG00000071431) tmpob (ENSSSAG00000071470) pthlhb (ENSSSAG00000091627) ENSSSAG00000071477 ENSSSAG00000114971 ENSSSAG00000096808 ENSSSAG00000120638 ENSSSAG00000071759 pmge (ENSSSAG00000071766) ##22 ENSSSAG00000100045 dnm1l (ENSSSAG00000071783) dnajb9a (ENSSSAG00000121518) ENSSSAG00000071934 CNTN1 (ENSSSAG00000072055) PDZRN4 (ENSSSAG00000072923) ENSSSAG00000072928 GXYLT1 (ENSSSAG00000103557) ENSSSAG00000005997 YAF2 (ENSSSAG00000072939) ENSSSAG00000006020 ccnd1 (ENSSSAG00000006058) ENSSSAG00000006067 fgf3 (ENSSSAG00000006079) ENSSSAG00000006181 River trout MODERN SPECIES 8 dhtkd1 (ENSSTUG00000039148) CELF2 (ENSSTUG00000038943) taf3 (ENSSTUG00000038874) gdi2 (ENSSTUG00000038817) ENSSTUG00000038795 slc35b4 (ENSSTUG00000038749) golt1bb (ENSSTUG00000038711) ldhbb (ENSSTUG00000038692) slc25a3b (ENSSTUG00000038654) tmpob (ENSSTUG00000038631) pthlhb (ENSSTUG00000038622) ENSSTUG00000038616 KCNA1 (ENSSTUG00000038609) CNOT4 (ENSSTUG00000038542) ENSSTUG00000038528 bpgm (ENSSTUG00000038520) ##22 ENSSTUG00000038517 tnnt2d (ENSSTUG00000038509) dnm1l (ENSSTUG00000038282) dnajb9a (ENSSTUG00000038242) ENSSTUG00000038210 NRCAM (ENSSTUG00000036375) CNTN1 (ENSSTUG00000031778) ENSSTUG00000031557 GXYLT1 (ENSSTUG00000031535) YAF2 (ENSSTUG00000031524) ENSSTUG00000031512 prickle1a (ENSSTUG00000031503) ENSSTUG00000031490 CCND1 (ENSSTUG00000031480) FGF4 (ENSSTUG00000031452) Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000155461.E.k ENSGT00710000106806.k ENSGT00950000182994.B.a.b.pb.a ENSGT00530000063735.b.g ENSGT00390000002915.f ENSGT00390000014507.a.a.g ENSGT00940000153525.i.b.e ENSGT00390000008708.a.a ENSGT00940000154098.a.e.j ENSGT00390000004933.k.b.c ENSGT00940000159286.a.a ENSGT00940000164299.b.b.b ENSGT00940000158576.a.b.b ENSGT00390000000068.a.b.c ENSGT01030000234588.b.b.b.a.b.h ENSGT00950000182926.a.p ##22 ENSGT00940000153901.a.a.a ENSGT00940000155504.k.a.d ENSGT00940000156246.c.a.d ENSGT00940000154738.a.q.d ENSGT00940000155419.c.a.g.b ENSGT00940000155915.a.c ENSGT00950000183062.a.a.b.b.b.e ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.a.c.b ENSGT00940000168203.a.b ENSGT00390000016228.a.b.a ENSGT00940000157529.i.a.e ENSGT01010000222986.b ENSGT00940000157816.a.a.b ENSGT00940000158825.d.b Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000155461.E.k ENSGT00710000106806.k ENSGT00950000182994.B.a.b.pb.a ENSGT00530000063735.b.g ENSGT00390000002915.f ENSGT00390000014507.a.a.g ENSGT00940000153525.i.b.e ENSGT00390000008708.a.a ENSGT00940000154098.a.e.j ENSGT00390000004933.k.b.c ENSGT00940000159286.a.a ENSGT00940000164299.b.b.b ENSGT00940000158576.a.b.b ENSGT00390000000068.a.b.c ENSGT01030000234588.b.b.b.a.b.h ENSGT00950000182926.a.p ##22 ENSGT00940000153901.a.a.a ENSGT00940000155504.k.a.d ENSGT00940000156246.c.a.d ENSGT00940000154738.a.q.d ENSGT00940000155419.c.a.g.b ENSGT00940000155915.a.c ENSGT00950000183062.a.a.b.b.b.e ENSGT00940000156242.c.a ENSGT00390000013995.b.b.k.a.c.b ENSGT00940000168203.a.b ENSGT00390000016228.a.b.a ENSGT00940000157529.i.a.e ENSGT01010000222986.b ENSGT00940000157816.a.a.b ENSGT00940000158825.d.b Coho salmon MODERN SPECIES 24 ENSOKIG00005046027 taf3 (ENSOKIG00005045979) ENSOKIG00005045910 ENSOKIG00005045897 ENSOKIG00005045887 slc35b4 (ENSOKIG00005045858) golt1bb (ENSOKIG00005045833) ldhbb (ENSOKIG00005045800) slc25a3b (ENSOKIG00005045703) tmpob (ENSOKIG00005045692) pthlhb (ENSOKIG00005045686) ENSOKIG00005045683 KCNA1 (ENSOKIG00005045674) CNOT4 (ENSOKIG00005045649) ENSOKIG00005045633 bpgm (ENSOKIG00005045626) ##22 ENSOKIG00005045619 dnm1l (ENSOKIG00005045495) dnajb9a (ENSOKIG00005045466) ENSOKIG00005045433 NRCAM (ENSOKIG00005027503) CNTN1 (ENSOKIG00005025528) PDZRN4 (ENSOKIG00005025425) GXYLT1 (ENSOKIG00005025409) YAF2 (ENSOKIG00005025382) PPHLN1 (ENSOKIG00005025369) prickle1a (ENSOKIG00005025356) ENSOKIG00005025336 CCND1 (ENSOKIG00005025315) FGF4 (ENSOKIG00005025287) FGF3 (ENSOKIG00005025256) Chinook salmon MODERN SPECIES 30 dhtkd1 (ENSOTSG00005045664) CELF2 (ENSOTSG00005045622) taf3 (ENSOTSG00005045619) gdi2 (ENSOTSG00005045617) ENSOTSG00005045614 slc35b4 (ENSOTSG00005045612) golt1bb (ENSOTSG00005045610) ldhbb (ENSOTSG00005045607) ENSOTSG00005045604 ENSOTSG00005045602 ENSOTSG00005045601 ENSOTSG00005045600 KCNA1 (ENSOTSG00005045599) CNOT4 (ENSOTSG00005045598) ENSOTSG00005045597 bpgm (ENSOTSG00005045596) ##22 ENSOTSG00005045594 ENSOTSG00005045592 dnm1l (ENSOTSG00005045205) dnajb9a (ENSOTSG00005045204) ENSOTSG00005045202 NRCAM (ENSOTSG00005034696) MAGI2 (ENSOTSG00005034662) CNTN1 (ENSOTSG00005028937) PDZRN4 (ENSOTSG00005043630) ENSOTSG00005043629 GXYLT1 (ENSOTSG00005043628) YAF2 (ENSOTSG00005043627) ENSOTSG00005043626 prickle1a (ENSOTSG00005043625) ENSOTSG00005043624 Rainbow trout MODERN SPECIES ENSOMYG00000050257 slc35b4 (ENSOMYG00000044709) golt1bb (ENSOMYG00000044707) ENSOMYG00000068445 ldhbb (ENSOMYG00000044694) slc25a3b (ENSOMYG00000044676) tmpob (ENSOMYG00000044670) pthlhb (ENSOMYG00000044666) ENSOMYG00000061278 ENSOMYG00000004825 ENSOMYG00000044665 ENSOMYG00000044662 ENSOMYG00000071286 ENSOMYG00000044648 ENSOMYG00000044636 bpgm (ENSOMYG00000044633) ##22 ENSOMYG00000044617 dnm1l (ENSOMYG00000043734) dnajb9a (ENSOMYG00000043552) ENSOMYG00000014596 ENSOMYG00000035634 ENSOMYG00000056734 ENSOMYG00000056490 CNTN1 (ENSOMYG00000029641) ENSOMYG00000070317 PDZRN4 (ENSOMYG00000073658) GXYLT1 (ENSOMYG00000028164) YAF2 (ENSOMYG00000028116) ENSOMYG00000028084 ENSOMYG00000028069 ENSOMYG00000028050 Huchen MODERN SPECIES 422 gdi2 (ENSHHUG00000001385) ENSHHUG00000001375 ENSHHUG00000001370 slc35b4 (ENSHHUG00000001317) golt1bb (ENSHHUG00000001304) ldhbb (ENSHHUG00000000706) slc25a3b (ENSHHUG00000000548) tmpob (ENSHHUG00000000532) pthlhb (ENSHHUG00000000523) ENSHHUG00000000516 ENSHHUG00000000510 KCNA1 (ENSHHUG00000000489) CNOT4 (ENSHHUG00000000444) ENSHHUG00000000418 ENSHHUG00000000401 bpgm (ENSHHUG00000000382) ##22 ENSHHUG00000000361 tnnt2d (ENSHHUG00000000257) dnm1l (ENSHHUG00000000243) Northern pike MODERN SPECIES 18 ENSELUG00000008507 slc35b4 (ENSELUG00000008530) ENSELUG00000029450 golt1bb (ENSELUG00000008613) ldhbb (ENSELUG00000008561) slc25a3b (ENSELUG00000008650) tmpob (ENSELUG00000008664) pthlhb (ENSELUG00000008679) ENSELUG00000000332 ENSELUG00000008708 KCNA1 (ENSELUG00000008711) CNOT4 (ENSELUG00000008742) zgc:136858 (ENSELUG00000008826) ENSELUG00000008902 tnni4b.2 (ENSELUG00000008923) bpgm (ENSELUG00000008952) ##22 CALD1 (ENSELUG00000029365) tnnt2d (ENSELUG00000015595) dnm1l (ENSELUG00000009177) dnajb9a (ENSELUG00000030103) ENSELUG00000009230 NRCAM (ENSELUG00000009528) CNTN1 (ENSELUG00000009649) PDZRN4 (ENSELUG00000009706) GXYLT1 (ENSELUG00000009783) YAF2 (ENSELUG00000009802) ENSELUG00000009809 prickle1a (ENSELUG00000009843) ENSELUG00000009865 ric8a (ENSELUG00000009893) TPCN2 (ENSELUG00000009976) Otomorpha ANCESTRAL SPECIES 597 ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a Clupeiformes ANCESTRAL SPECIES 139 ENSGT00940000158686.d ENSGT00940000154189.B ENSGT00940000159839.d.b ENSGT00390000010968.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000175224 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504 ENSGT00940000156246.c.a ENSGT00940000155025.A ENSGT00940000154738.a.q ENSGT00940000155419.c.a ENSGT00940000155915.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000156242.c.a ENSGT00530000063554.a ENSGT00940000160061 ENSGT00950000183194.a.a ENSGT00950000183194.b Denticle herring MODERN SPECIES 8 GRAMD4 (ENSDCDG00000033039) ENSDCDG00000033134 KCNA1 (ENSDCDG00000033135) tmem178ba (ENSDCDG00000033136) CNOT4 (ENSDCDG00000033138) ENSDCDG00000033146 ENSDCDG00000033148 ENSDCDG00000033149 ENSDCDG00000033151 zgc:136858 (ENSDCDG00000033153) ENSDCDG00000033158 ENSDCDG00000033159 ENSDCDG00000033161 ENSDCDG00000033162 tnni4b.2 (ENSDCDG00000033163) bpgm (ENSDCDG00000033165) ##22 CALD1 (ENSDCDG00000033169) tnnt2d (ENSDCDG00000033173) dnm1l (ENSDCDG00000033194) dnajb9a (ENSDCDG00000033272) ENSDCDG00000012665 ENSDCDG00000012785 ENSDCDG00000013496 CNTN1 (ENSDCDG00000027377) ENSDCDG00000027473 PDZRN4 (ENSDCDG00000027474) GXYLT1 (ENSDCDG00000027476) pus7 (ENSDCDG00000027483) hdac10 (ENSDCDG00000027612) ENSDCDG00000027700 parvg (ENSDCDG00000027702) Atlantic herring MODERN SPECIES 19 ENSCHAG00000012164 atp2b1b (ENSCHAG00000006419) gtse1 (ENSCHAG00000006220) ENSCHAG00000004490 GRAMD4 (ENSCHAG00000002310) ENSCHAG00000002221 KCNA1 (ENSCHAG00000002201) tmem178ba (ENSCHAG00000002185) CNOT4 (ENSCHAG00000002097) ENSCHAG00000002073 ENSCHAG00000002049 zgc:136858 (ENSCHAG00000001892) ENSCHAG00000001832 tnni4b.2 (ENSCHAG00000001623) ENSCHAG00000001241 bpgm (ENSCHAG00000001141) ##22 ENSCHAG00000001093 tnnt2d (ENSCHAG00000000865) dnm1l (ENSCHAG00000027213) dnajb9a (ENSCHAG00000027196) ENSCHAG00000027195 ENSCHAG00000027160 NRCAM (ENSCHAG00000024494) CNTN1 (ENSCHAG00000022843) PDZRN4 (ENSCHAG00000022707) ENSCHAG00000022702 GXYLT1 (ENSCHAG00000022694) pus7 (ENSCHAG00000021961) hdac10 (ENSCHAG00000021810) parvb (ENSCHAG00000021676) parvg (ENSCHAG00000021655) Otophysi ANCESTRAL SPECIES 104 ENSGT00640000091774.a.c.a ENSGT00640000091774.a.c.b ENSGT00950000183004.a.b.b ENSGT00510000047522 ENSGT00940000159839.d.b ENSGT00390000010968.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504 ENSGT00940000156246.c.a ENSGT00390000011620.b.e.h ENSGT00940000159496.l ENSGT00940000159100.h ENSGT00950000183113.b.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a ENSGT00390000016435 ENSGT00530000064192 ENSGT00530000063113.A ENSGT00940000155057.wb.f ENSGT00940000153567.a.a.b.a Characiphysae ANCESTRAL SPECIES 7 ENSGT00720000108833 ENSGT00940000154189.B ENSGT00940000158686.d ENSGT00640000091774.a.c.a ENSGT00940000159839.d.b ENSGT00390000010968.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504 ENSGT00940000156246.c.a ENSGT00390000011620.b.e.h ENSGT00940000159496.l ENSGT00940000159100.h ENSGT00950000183113.b.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a ENSGT00390000016435 ENSGT00530000064192 ENSGT00530000063113.A ENSGT00940000155057.wb.f ENSGT00940000153567.a.a.b.a Characiphysae_b ANCESTRAL SPECIES 7 ENSGT00720000108833 ENSGT00940000154189.B ENSGT00940000158686.d ENSGT00640000091774.a.c.a ENSGT00940000159839.d.b ENSGT00390000010968.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504 ENSGT00940000156246.c.a ENSGT00390000011620.b.e.h ENSGT00940000159496.l ENSGT00940000159100.h ENSGT00950000183113.b.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a ENSGT00390000016435 ENSGT00530000064192 ENSGT00530000063113.A ENSGT00940000155057.wb.f ENSGT00940000153567.a.a.b.a Characoidei ANCESTRAL SPECIES 2 ENSGT00940000158686.d ENSGT00640000091774.a.c.a ENSGT00640000091774.a.c.b ENSGT00950000183004.a.b.b ENSGT00940000159839.d.b ENSGT00390000010968.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504 ENSGT00940000156246.c.a ENSGT00390000011620.b.e.h ENSGT00940000159496.l ENSGT00940000159100.h ENSGT00950000183113.b.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a ENSGT00390000016435 ENSGT00530000064192 ENSGT00530000063113.A ENSGT00940000155057.wb.f ENSGT00940000153567.a.a.b.a Red-bellied piranha MODERN SPECIES 14 zgc:113426 (ENSPNAG00000020885) ENSPNAG00000020874 zgc:101783 (ENSPNAG00000020851) ENSPNAG00000020670 GRAMD4 (ENSPNAG00000020639) ENSPNAG00000020490 KCNA1 (ENSPNAG00000020478) tmem178ba (ENSPNAG00000020457) CNOT4 (ENSPNAG00000020433) zgc:136858 (ENSPNAG00000020362) ENSPNAG00000005186 ENSPNAG00000020311 tnni4b.2 (ENSPNAG00000020281) ENSPNAG00000020275 ENSPNAG00000020254 bpgm (ENSPNAG00000020232) ##22 ENSPNAG00000020214 tnnt2d (ENSPNAG00000020179) dnm1l (ENSPNAG00000020017) dnajb9a (ENSPNAG00000019951) ENSPNAG00000019924 kctd15a (ENSPNAG00000019793) CHST8 (ENSPNAG00000019778) adal (ENSPNAG00000019774) cplx3a (ENSPNAG00000003608) csk (ENSPNAG00000019720) edc3 (ENSPNAG00000019657) kxd1 (ENSPNAG00000019635) ergic2 (ENSPNAG00000019558) MAGI2 (ENSPNAG00000019454) gnaia (ENSPNAG00000018193) Mexicana tetra MODERN SPECIES 16 atp2b1b (ENSAMXG00000009418) zgc:171459 (ENSAMXG00000032912) zgc:101783 (ENSAMXG00000033552) ENSAMXG00000009402 ENSAMXG00000009342 GRAMD4 (ENSAMXG00000034463) ENSAMXG00000035147 ENSAMXG00000033288 KCNA1 (ENSAMXG00000024909) CNOT4 (ENSAMXG00000001373) tmem178ba (ENSAMXG00000001358) zgc:136858 (ENSAMXG00000001386) ENSAMXG00000001401 ENSAMXG00000001410 ENSAMXG00000041360 bpgm (ENSAMXG00000043597) ##22 ENSAMXG00000001442 tnnt2d (ENSAMXG00000001452) dnm1l (ENSAMXG00000001473) dnajb9a (ENSAMXG00000041051) ENSAMXG00000001498 kctd15a (ENSAMXG00000001523) CHST8 (ENSAMXG00000041509) adal (ENSAMXG00000001538) cplx3a (ENSAMXG00000040195) csk (ENSAMXG00000001554) edc3 (ENSAMXG00000001589) kxd1 (ENSAMXG00000031268) ergic2 (ENSAMXG00000034586) MAGI2 (ENSAMXG00000001699) gnaia (ENSAMXG00000040807) Electric eel MODERN SPECIES 210 ENSEEEG00000021632 zgc:171459 (ENSEEEG00000021636) zgc:101783 (ENSEEEG00000021638) ENSEEEG00000021640 ENSEEEG00000021646 ENSEEEG00000021676 GRAMD4 (ENSEEEG00000021680) ENSEEEG00000021741 KCNA1 (ENSEEEG00000021742) tmem178ba (ENSEEEG00000021744) CNOT4 (ENSEEEG00000021750) zgc:136858 (ENSEEEG00000021808) ENSEEEG00000021811 ENSEEEG00000021812 tnni4b.2 (ENSEEEG00000021817) bpgm (ENSEEEG00000021875) ##22 ENSEEEG00000021880 tnnt2d (ENSEEEG00000021889) dnm1l (ENSEEEG00000021907) dnajb9a (ENSEEEG00000021919) ENSEEEG00000021922 kctd15a (ENSEEEG00000021924) CHST8 (ENSEEEG00000021927) adal (ENSEEEG00000021931) cplx3a (ENSEEEG00000021934) csk (ENSEEEG00000021940) edc3 (ENSEEEG00000021958) kxd1 (ENSEEEG00000021960) ergic2 (ENSEEEG00000021964) MAGI2 (ENSEEEG00000021972) ENSEEEG00000021977 Channel catfish MODERN SPECIES 27 zgc:171459 (ENSIPUG00000006601) zgc:113426 (ENSIPUG00000006587) ENSIPUG00000006567 ENSIPUG00000006537 GRAMD4 (ENSIPUG00000006473) ENSIPUG00000006451 KCNA1 (ENSIPUG00000006446) tmem178ba (ENSIPUG00000006428) cnot4 (ENSIPUG00000006393) zgc:136858 (ENSIPUG00000006339) ENSIPUG00000006327 ENSIPUG00000006305 tnni4b.2 (ENSIPUG00000006254) ENSIPUG00000006229 ENSIPUG00000006197 bpgm (ENSIPUG00000006178) ##22 ENSIPUG00000006161 tnnt2d (ENSIPUG00000006128) dnm1l (ENSIPUG00000006021) Dnajb9 (ENSIPUG00000006006) ENSIPUG00000005936 kctd15l (ENSIPUG00000005894) CHST8 (ENSIPUG00000005881) adal (ENSIPUG00000005795) cplx3 (ENSIPUG00000005778) csk (ENSIPUG00000005716) edc3 (ENSIPUG00000005695) kxd1 (ENSIPUG00000005659) ergic2 (ENSIPUG00000005608) MAGI2 (ENSIPUG00000005235) gnaia (ENSIPUG00000004369) Cyprinoidei ANCESTRAL SPECIES 53 ENSGT00940000164201.c.b.b.b ENSGT00940000164201.c.b.a.e.a ENSGT00940000164201.c.b.a.e.b.a ENSGT00950000183004.a.b.b ENSGT00940000159839.d.b ENSGT00390000010968.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00390000000068.a.b ENSGT00390000007427 ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT00950000182926.a ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b.c ENSGT00940000155504.j ENSGT00940000156246.c.a ENSGT00390000011620.b.e.h ENSGT00940000159496.l ENSGT00940000159100.h ENSGT00950000183113.b.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a ENSGT00390000016435 ENSGT00530000064192 ENSGT00530000063113.A ENSGT00940000155057.wb.e.b ENSGT00940000153567.a.a.b.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 152 ENSGT00940000158686.d.b ENSGT00640000091774.a.c.a.a ENSGT00640000091774.a.c.b.a ENSGT00950000183004.a.b.b.a ENSGT00510000047522.d.a ENSGT00940000159839.d.b.a ENSGT00390000010968.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b.e ENSGT00390000015299.a.b.b.a.e.b ENSGT00390000000068.a.b.b ENSGT00390000007427.b ENSGT01030000234588.b.b.b.a.a.b.b.n.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a.a ENSGT00950000182926.a.q ##22 ENSGT00940000153901.a.a.a.a ENSGT00940000154709.a.b.b.c.e ENSGT00940000155504.j.b ENSGT00940000156246.c.a.a ENSGT00390000011620.b.e.h.b ENSGT00940000159496.l.a ENSGT00940000159100.h.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a.b ENSGT00390000016435.f ENSGT00530000064192 ENSGT00530000063113.A.s.b ENSGT00940000155057.wb.e.b ENSGT00940000153567.a.a.b.b.b.b ENSGT00940000158940.b.a.b Goldfish MODERN SPECIES 45 gtse1 (ENSCARG00000030510) atp2b1b (ENSCARG00000030541) zgc:171459 (ENSCARG00000030552) zgc:113426 (ENSCARG00000030557) zgc:101783 (ENSCARG00000030568) ENSCARG00000030579 ENSCARG00000030683 GRAMD4 (ENSCARG00000033635) kcna6a (ENSCARG00000033980) KCNA1 (ENSCARG00000033987) tmem178ba (ENSCARG00000033995) CNOT4 (ENSCARG00000034017) ENSCARG00000034142 ENSCARG00000034162 tnni4b.2 (ENSCARG00000034173) bpgm (ENSCARG00000034210) ##22 ENSCARG00000034231 tnnt2d (ENSCARG00000034258) DNM1L (ENSCARG00000034349) dnajb9a (ENSCARG00000035528) ENSCARG00000035543 kctd15a (ENSCARG00000035628) CHST8 (ENSCARG00000035707) cplx3a (ENSCARG00000035721) csk (ENSCARG00000035784) edc3 (ENSCARG00000036373) kxd1 (ENSCARG00000036381) MAGI2 (ENSCARG00000036407) gnaia (ENSCARG00000036512) CHRM2 (ENSCARG00000036541) fbxl14a (ENSCARG00000036548) Cyprininae_a ANCESTRAL SPECIES 46 ENSGT00640000091774.a.c.a.a ENSGT00640000091774.a.c.b.a ENSGT00940000164201.c.b.a.e.a.b ENSGT00950000183004.a.b.b.a ENSGT00510000047522.d.a ENSGT00940000159839.d.b.a ENSGT00390000010968.a.a ENSGT00940000164299.b.b ENSGT00940000158576.a.b.e ENSGT00390000015299.a.b.b.a.e.b ENSGT00390000000068.a.b.b ENSGT00390000007427.b ENSGT01030000234588.b.b.b.a.a.b.b.n.b ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.a.a ENSGT00950000182926.a.q ##22 ENSGT00940000153901.a.a.a.a ENSGT00940000154709.a.b.b.c.e ENSGT00940000155504.j.b ENSGT00940000156246.c.a.a ENSGT00390000011620.b.e.h.b ENSGT00940000159496.l.a ENSGT00940000159100.h.a ENSGT00950000182938.b.b.b.b.a.e.b ENSGT00940000157431.c.a.b ENSGT00390000016435.f ENSGT00530000064192 ENSGT00530000063113.A.s.a ENSGT00940000155057.wb.e.a ENSGT00940000153567.a.a.b.b.b.a ENSGT00940000158940.b.a.a Common carp reference MODERN SPECIES 33 atp2b1b (ENSCCRG00000015848) zgc:113426 (ENSCCRG00000015835) mxg (ENSCCRG00000045849) ENSCCRG00000053451 zgc:101783 (ENSCCRG00000014583) ENSCCRG00000071231 ENSCCRG00000000912 ENSCCRG00000006960 ENSCCRG00000076127 ENSCCRG00000065772 ENSCCRG00000038814 zgc:136858 (ENSCCRG00000038816) ENSCCRG00000038826 ENSCCRG00000072998 tnni4b.2 (ENSCCRG00000038842) bpgm (ENSCCRG00000074369) ##22 ENSCCRG00000079503 ENSCCRG00000059759 tnnt2d (ENSCCRG00000067690) ENSCCRG00000038928 dnajb9a (ENSCCRG00000063117) ENSCCRG00000038902 kctd15a (ENSCCRG00000065628) ENSCCRG00000039975 ENSCCRG00000081808 adal (ENSCCRG00000047193) cplx3a (ENSCCRG00000063843) csk (ENSCCRG00000040243) edc3 (ENSCCRG00000072553) ENSCCRG00000081903 ergic2 (ENSCCRG00000040415) Golden-line barbel MODERN SPECIES 30 zgc:113426 (ENSSGRG00000050035) mxg (ENSSGRG00000049977) zgc:101783 (ENSSGRG00000049975) ENSSGRG00000049974 ENSSGRG00000049973 GRAMD4 (ENSSGRG00000049972) kcna6a (ENSSGRG00000049971) KCNA1 (ENSSGRG00000049969) tmem178ba (ENSSGRG00000049967) CNOT4 (ENSSGRG00000049881) zgc:136858 (ENSSGRG00000049879) ENSSGRG00000049878 tnni4b.2 (ENSSGRG00000049876) ENSSGRG00000049833 ENSSGRG00000049830 bpgm (ENSSGRG00000049828) ##22 tnnt2d (ENSSGRG00000049789) DNM1L (ENSSGRG00000049324) dnajb9a (ENSSGRG00000049321) ENSSGRG00000049320 CHST8 (ENSSGRG00000049319) kctd15a (ENSSGRG00000049318) CPLX3 (ENSSGRG00000049316) csk (ENSSGRG00000049064) kxd1 (ENSSGRG00000049053) edc3 (ENSSGRG00000049052) ergic2 (ENSSGRG00000048832) ENSSGRG00000048828 MAGI2 (ENSSGRG00000048416) gnaia (ENSSGRG00000048356) CHRM2 (ENSSGRG00000048355) Cyprininae ANCESTRAL SPECIES 197 ENSGT00940000164201.c.b.b.b ENSGT00940000164201.c.b.a.e.a ENSGT00940000164201.c.b.a.e.b.a ENSGT00950000183004.a.b.b.b ENSGT00510000047522.d.b ENSGT00940000159839.d.b.b ENSGT00390000010968.a.b ENSGT00940000158576.b ENSGT00940000158576.a.b.f ENSGT00390000015299.a.b.b.a.e.a ENSGT00390000000068.a.b.a ENSGT00390000007427.a ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.b.n.a ENSGT01030000234588.b.b.b.a.a.b.a.a.b ENSGT00950000182926.a.r ##22 ENSGT00940000153901.a.a.a.b ENSGT00940000154709.a.b.b.c.f ENSGT00940000155504.j.a ENSGT00940000156246.c.a.b ENSGT00390000011620.b.e.h.a ENSGT00940000159496.l.b ENSGT00940000159100.h.b ENSGT00950000183113.b.a ENSGT00940000157431.c.a.a ENSGT00390000016435.e Cyprininae_a ANCESTRAL SPECIES 16 ENSGT00940000164201.c.b.a.e.b.a ENSGT00940000164201.c.b.a.e.b.b.a.a ENSGT00940000161814.g.a.d.d.b ENSGT00950000183004.a.b.b.b ENSGT00510000047522.d.b ENSGT00940000159839.d.b.b ENSGT00390000010968.a.b ENSGT00940000158576.b ENSGT00940000158576.a.b.f ENSGT00390000015299.a.b.b.a.e.a ENSGT00390000000068.a.b.a ENSGT00390000007427.a ENSGT00940000165644.e ENSGT01030000234588.b.b.b.a.a.b.b.n.a ENSGT01030000234588.b.b.b.a.a.b.a.a.b ENSGT00950000182926.a.r ##22 ENSGT00940000153901.a.a.a.b ENSGT00940000154709.a.b.b.c.f ENSGT00940000155504.j.a ENSGT00940000156246.c.a.b ENSGT00390000011620.b.e.h.a ENSGT00940000159496.l.b ENSGT00940000159100.h.b ENSGT00950000183113.b.a ENSGT00940000157431.c.a.a ENSGT00390000016435.e ENSGT00530000063113.A.s.b ENSGT00940000155057.wb.e.b ENSGT00940000153567.a.a.b.b.b.b ENSGT00940000158940.b.a.b ENSGT00940000159857.a.b.a Golden-line barbel MODERN SPECIES 132 ENSSGRG00000026885 ENSSGRG00000026869 ENSSGRG00000026868 zgc:101783 (ENSSGRG00000026865) ENSSGRG00000026864 ENSSGRG00000026862 ENSSGRG00000026860 ENSSGRG00000026858 kcna6a (ENSSGRG00000026857) KCNA1 (ENSSGRG00000026856) CNOT4 (ENSSGRG00000026568) zgc:136858 (ENSSGRG00000026564) ENSSGRG00000026562 ENSSGRG00000026556 ENSSGRG00000026554 bpgm (ENSSGRG00000026553) ##22 ENSSGRG00000026549 tnnt2d (ENSSGRG00000026548) DNM1L (ENSSGRG00000026381) gpn3 (ENSSGRG00000026363) arpc3 (ENSSGRG00000026347) NXPH3 (ENSSGRG00000026346) spop (ENSSGRG00000026330) ndufa4a (ENSSGRG00000026329) slc35b1 (ENSSGRG00000026072) ENSSGRG00000026062 ENSSGRG00000026061 RUNDC3A (ENSSGRG00000025919) tlcd3ba (ENSSGRG00000025915) nlk1 (ENSSGRG00000025913) ENSSGRG00000025912 Common carp reference MODERN SPECIES 37 ENSCCRG00000061754 ENSCCRG00000058370 ENSCCRG00000000127 ENSCCRG00000073340 ENSCCRG00000015905 ENSCCRG00000059214 ENSCCRG00000014579 ENSCCRG00000060223 ENSCCRG00000038683 kcna6a (ENSCCRG00000080457) ENSCCRG00000067113 tmem178ba (ENSCCRG00000050586) ENSCCRG00000038798 zgc:136858 (ENSCCRG00000038805) ENSCCRG00000038912 bpgm (ENSCCRG00000058627) ##22 ENSCCRG00000038889 ENSCCRG00000081197 tnnt2d (ENSCCRG00000063735) dnajb9a (ENSCCRG00000076246) ENSCCRG00000017402 kctd15a (ENSCCRG00000051449) ENSCCRG00000072019 adal (ENSCCRG00000040220) csk (ENSCCRG00000046713) edc3 (ENSCCRG00000040375) ergic2 (ENSCCRG00000015617) ENSCCRG00000076015 gnaia (ENSCCRG00000046884) ENSCCRG00000046877 fbxl14a (ENSCCRG00000077603) Goldfish MODERN SPECIES 17 ENSCARG00000012807 ENSCARG00000012829 ENSCARG00000012834 ENSCARG00000012847 ENSCARG00000012852 ENSCARG00000012871 zgc:101783 (ENSCARG00000012876) ENSCARG00000012881 ENSCARG00000012918 GRAMD4 (ENSCARG00000013383) KCNA1 (ENSCARG00000013602) tmem178ba (ENSCARG00000013604) CNOT4 (ENSCARG00000013610) zgc:136858 (ENSCARG00000013641) ENSCARG00000013671 bpgm (ENSCARG00000013697) ##22 ENSCARG00000013709 tnnt2d (ENSCARG00000013727) DNM1L (ENSCARG00000013834) dnajb9a (ENSCARG00000016226) ENSCARG00000016236 kctd15a (ENSCARG00000016261) CHST8 (ENSCARG00000016277) adal (ENSCARG00000016281) csk (ENSCARG00000016360) edc3 (ENSCARG00000040892) kxd1 (ENSCARG00000040917) ergic2 (ENSCARG00000041095) MAGI2 (ENSCARG00000041260) gnaia (ENSCARG00000045728) CHRM2 (ENSCARG00000045739) Zebrafish MODERN SPECIES 17 zgc:171459 (ENSDARG00000077248) zgc:113426 (ENSDARG00000051793) ENSDARG00000051795 mxg (ENSDARG00000008019) ENSDARG00000023369 zgc:101783 (ENSDARG00000045824) ENSDARG00000058259 GRAMD4 (ENSDARG00000045506) kcna6a (ENSDARG00000046014) KCNA1 (ENSDARG00000062942) tmem178ba (ENSDARG00000004577) CNOT4 (ENSDARG00000007045) zgc:136858 (ENSDARG00000070830) ENSDARG00000092999 tnni4b.2 (ENSDARG00000036671) bpgm (ENSDARG00000070826) ##22 ENSDARG00000086391 tnnt2d (ENSDARG00000002988) dnm1l (ENSDARG00000015006) dnajb9a (ENSDARG00000052072) ENSDARG00000075805 kctd15a (ENSDARG00000045893) CHST8 (ENSDARG00000074560) adal (ENSDARG00000012986) cplx3a (ENSDARG00000062508) csk (ENSDARG00000067996) edc3 (ENSDARG00000051931) kxd1 (ENSDARG00000051934) ergic2 (ENSDARG00000051936) ENSDARG00000103367 MAGI2 (ENSDARG00000073769) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 262 ENSGT00940000157682.B.a.b ENSGT00890000139436.B ENSGT00390000010382 ENSGT00390000005941 ENSGT00390000010852 ENSGT00940000155659.j ENSGT00940000160513.d ENSGT01030000234588.b.b.b.a.a.b.b ENSGT00950000182926.a.s ##22 ENSGT00940000153901.a.a.b ENSGT00940000155504.h ENSGT00940000164630 ENSGT00940000158600 ENSGT00940000158917.b ENSGT00940000155486.b ENSGT00950000183205.b.a.b.a.b ENSGT00390000016138 ENSGT00940000157255.c.b ENSGT00940000165903 ENSGT00810000125439.B.c.a.b ENSGT00940000158636.d ENSGT00940000157033.h ENSGT00730000110905.b.cb Asian bonytongue MODERN SPECIES 13 nrf1 (ENSSFOG00015000258) STRIP2 (ENSSFOG00015000269) ahcyl2b (ENSSFOG00015000383) tfec (ENSSFOG00015026382) mdfic (ENSSFOG00015025575) foxp2 (ENSSFOG00015026081) ENSSFOG00015025224 ENSSFOG00015026054 ENSSFOG00015033175 gpr85 (ENSSFOG00015031287) bmt2 (ENSSFOG00015025565) tmem168a (ENSSFOG00015000729) znf277 (ENSSFOG00015025344) DOCK4 (ENSSFOG00015000753) LRRN3 (ENSSFOG00015000950) bpgm (ENSSFOG00015000962) ##22 CALD1 (ENSSFOG00015000982) dnm1l (ENSSFOG00015001002) ENSSFOG00015025449 ANO4 (ENSSFOG00015001082) slc38a4 (ENSSFOG00015001182) slc38a2 (ENSSFOG00015001237) ENSSFOG00015001249 arid2 (ENSSFOG00015001259) NUAK1 (ENSSFOG00015032406) ENSSFOG00015001427 NELL2 (ENSSFOG00015001434) TWF1 (ENSSFOG00015001515) ENSSFOG00015001573 FRS2 (ENSSFOG00015001685) cpsf6 (ENSSFOG00015001688) P. kingsleyae MODERN SPECIES 98 ASCL4 (ENSPKIG00000000847) prdm4 (ENSPKIG00000000875) cpa4 (ENSPKIG00000000906) tfec (ENSPKIG00000000953) foxp2 (ENSPKIG00000000998) ENSPKIG00000001022 ENSPKIG00000001050 ENSPKIG00000001062 gpr85 (ENSPKIG00000001070) bmt2 (ENSPKIG00000001087) tmem168a (ENSPKIG00000001106) znf277 (ENSPKIG00000001137) DOCK4 (ENSPKIG00000001298) LRRN3 (ENSPKIG00000001382) ENSPKIG00000001406 bpgm (ENSPKIG00000001444) ##22 ENSPKIG00000001488 dnm1l (ENSPKIG00000001634) ENSPKIG00000001801 ANO4 (ENSPKIG00000001879) slc38a4 (ENSPKIG00000002099) slc38a2 (ENSPKIG00000002207) SCAF11 (ENSPKIG00000002269) arid2 (ENSPKIG00000002325) ENSPKIG00000002368 ENSPKIG00000002415 NELL2 (ENSPKIG00000002558) ENSPKIG00000002630 ENSPKIG00000002721 nots (ENSPKIG00000003042) frs2b (ENSPKIG00000003064) Osteoglossiformes ANCESTRAL SPECIES 78 ENSGT00390000013347.a ENSGT00940000155659.i ENSGT00940000160513.c ENSGT00550000075044 ENSGT01030000234588.b.b.b.a.a.b.a ENSGT00950000182926.a.t ##22 ENSGT00940000153901.a.a.a ENSGT00940000154709.a.b.b ENSGT00940000155504.g ENSGT00940000156246 ENSGT00940000154738.a.q.b ENSGT00940000155419.b ENSGT00940000155915.b ENSGT00950000183062.a.a.b.b.a.a ENSGT00940000156242.c.b ENSGT00390000013995.b.b.l ENSGT00730000111061 ENSGT00940000157529.h ENSGT00940000158636.c ENSGT00530000063554.b ENSGT00940000158792 P. kingsleyae MODERN SPECIES 277 mdfic (ENSPKIG00000011284) foxp2 (ENSPKIG00000011260) ENSPKIG00000011225 gpr85 (ENSPKIG00000011194) ifrd1 (ENSPKIG00000011125) DOCK4 (ENSPKIG00000011039) ENSPKIG00000011004 LRRN3 (ENSPKIG00000010996) immp2l (ENSPKIG00000010962) ENSPKIG00000010928 ENSPKIG00000010896 tnni4b.2 (ENSPKIG00000010867) BPGM (ENSPKIG00000010857) ##22 CALD1 (ENSPKIG00000010762) tnnt2e (ENSPKIG00000010693) dnm1l (ENSPKIG00000010643) dnajb9a (ENSPKIG00000010622) ENSPKIG00000010599 NRCAM (ENSPKIG00000010362) cntn1b (ENSPKIG00000010270) Asian bonytongue MODERN SPECIES 11 nrf1 (ENSSFOG00015003725) ahcyl2b (ENSSFOG00015003733) ENSSFOG00015025216 tmem209 (ENSSFOG00015003806) tfec (ENSSFOG00015003909) mdfic (ENSSFOG00015003924) foxp2 (ENSSFOG00015028287) ENSSFOG00015004031 gpr85 (ENSSFOG00015028854) ifrd1 (ENSSFOG00015004065) DOCK4 (ENSSFOG00015004127) immp2l (ENSSFOG00015004251) LRRN3 (ENSSFOG00015004288) tnni4a (ENSSFOG00015029160) tnni4b.2 (ENSSFOG00015004323) BPGM (ENSSFOG00015025855) ##22 ENSSFOG00015004354 tnnt2e (ENSSFOG00015004428) dnm1l (ENSSFOG00015004634) dnajb9a (ENSSFOG00015026036) PNPLA8 (ENSSFOG00015004728) NRCAM (ENSSFOG00015004774) cntn1b (ENSSFOG00015004987) pdzrn4 (ENSSFOG00015005067) gxylt1b (ENSSFOG00015005096) yaf2 (ENSSFOG00015005138) zcrb1 (ENSSFOG00015005150) PRICKLE1 (ENSSFOG00015005176) ADAMTS20 (ENSSFOG00015005220) pus7l (ENSSFOG00015005598) IRAK4 (ENSSFOG00015005625) Spotted gar MODERN SPECIES 237 tnni4b.2 (ENSLOCG00000000803) bpgm (ENSLOCG00000000860) ##22 CALD1 (ENSLOCG00000000883) tnnt2d (ENSLOCG00000000913) dnm1l (ENSLOCG00000000949) dnajb9a (ENSLOCG00000001014) ENSLOCG00000001060 ENSLOCG00000001076 PNPLA8 (ENSLOCG00000001102) nrcama (ENSLOCG00000001143) cntn1b (ENSLOCG00000001255) ENSLOCG00000001323 pdzrn4 (ENSLOCG00000001340) gxylt1b (ENSLOCG00000001360) yaf2 (ENSLOCG00000001370) zcrb1 (ENSLOCG00000001409) pphln1 (ENSLOCG00000001448) Reedfish MODERN SPECIES ENSECRG00000007838 xpot (ENSECRG00000007727) HTD2 (ENSECRG00000007680) rpp14 (ENSECRG00000007673) ckmb (ENSECRG00000007659) dnali1 (ENSECRG00000007642) dnali1 (ENSECRG00000007590) dnali1 (ENSECRG00000007569) ercc2 (ENSECRG00000007546) arhgef39 (ENSECRG00000007528) lmo3 (ENSECRG00000007496) mgst1.1 (ENSECRG00000007469) SLC15A5 (ENSECRG00000007455) dera (ENSECRG00000007440) strap (ENSECRG00000007427) bpgm (ENSECRG00000007417) ##22 CALD1 (ENSECRG00000007402) tnnt2d (ENSECRG00000007289) ENSECRG00000007258 si:cabz01085950.1 (ENSECRG00000007234) kiaa0930 (ENSECRG00000007197) pparaa (ENSECRG00000007145) WNT7B (ENSECRG00000007123) ENSECRG00000007113 ATXN10 (ENSECRG00000007096) fbln1 (ENSECRG00000007080) TRIM24 (ENSECRG00000007071) AKR1D1 (ENSECRG00000007056) GGCX (ENSECRG00000006898) STARD7 (ENSECRG00000006831) tmem127 (ENSECRG00000006814) Elephant shark MODERN SPECIES 1604 ENSCMIG00000012701 zgc:154077 (ENSCMIG00000012699) ENSCMIG00000012697 ENSCMIG00000012692 ndufa9 (ENSCMIG00000012667) ENSCMIG00000012655 KCNA1 (ENSCMIG00000012654) KCNA5 (ENSCMIG00000012652) ntf3 (ENSCMIG00000012649) ano2b (ENSCMIG00000012617) VWF (ENSCMIG00000012486) cd9 (ENSCMIG00000012373) cwf19l1 (ENSCMIG00000012296) ENSCMIG00000012262 tnni4a (ENSCMIG00000012259) bpgm (ENSCMIG00000012257) ##22 CALD1 (ENSCMIG00000012255) ENSCMIG00000012249 si:cabz01085950.1 (ENSCMIG00000012246) ENSCMIG00000012244 PTPRO (ENSCMIG00000012157) eps8a (ENSCMIG00000012069) strap (ENSCMIG00000012009) dera (ENSCMIG00000011884) SLC15A5 (ENSCMIG00000011848) mgst1.1 (ENSCMIG00000011845) lmo3 (ENSCMIG00000011829) arhgef39 (ENSCMIG00000011819) ENSCMIG00000011806 rergla (ENSCMIG00000011798) PLCZ1 (ENSCMIG00000011796) Cyclostomata ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Lamprey MODERN SPECIES 2178 bpgm (ENSPMAG00000000393) ##22 Hagfish MODERN SPECIES 565 ENSEBUG00000008504 ENSEBUG00000001094 ENSEBUG00000007314 ENSEBUG00000016842 ENSEBUG00000015783 ##22 chmp2a (ENSEBUG00000006900) chmp2a (ENSEBUG00000006301) ENSEBUG00000006954 tmem86a (ENSEBUG00000010678) bcat1 (ENSEBUG00000013406) bmal1a (ENSEBUG00000009694) ENSEBUG00000009507 ENSEBUG00000015139 cstf3 (ENSEBUG00000015459) ENSEBUG00000015383 Ecdysozoa ANCESTRAL SPECIES ENSGT00950000182926.a ##22 Fruitfly MODERN SPECIES 19 CG5386 (FBgn0038945) rdhB (FBgn0038946) Sar1 (FBgn0038947) JMJD6 (FBgn0038948) Muted (FBgn0083967) CG7071 (FBgn0260467) CG5382 (FBgn0038950) Polr3F (FBgn0038951) PyK (FBgn0267385) CG7069 (FBgn0038952) CG18596 (FBgn0038953) CG34149 (FBgn0083985) CG43342 (FBgn0263047) Gpdh3 (FBgn0263048) CAH8 (FBgn0038956) CG7059 (FBgn0038957) ##22 CG13857 (FBgn0038958) CG13856 (FBgn0038959) CG13855 (FBgn0038960) CG13850 (FBgn0038961) lqfR (FBgn0261279) Nop56 (FBgn0038964) mats (FBgn0038965) pinta (FBgn0038966) CG13847 (FBgn0038967) CG12499 (FBgn0038968) CG34288 (FBgn0085317) CG34376 (FBgn0085405) Rpn7 (FBgn0028688) AP-2mu (FBgn0263351) CG7054 (FBgn0038972)