Chordata	ANCESTRAL SPECIES																	ENSGT00940000157302 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157302 #22
Gnathostomata	ANCESTRAL SPECIES	911															ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24
Euteleostomi	ANCESTRAL SPECIES	56																ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.b	ENSGT00940000170114	ENSGT00950000183010.a.b	ENSGT00940000159394	ENSGT01030000234626.D
Sarcopterygii	ANCESTRAL SPECIES	68																ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.b	ENSGT00940000170114	ENSGT00950000183010.a.b	ENSGT00940000159394	ENSGT01030000234626.D
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT00940000164634
Amniota	ANCESTRAL SPECIES	4	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT00940000164634
Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT00940000164634	ENSGT00940000166139
Theria	ANCESTRAL SPECIES	11	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01070000254624	ENSGT01030000234969
Eutheria	ANCESTRAL SPECIES	20	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT01050000244995
Boreoeutheria	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Glires	ANCESTRAL SPECIES	23	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Rodentia	ANCESTRAL SPECIES	23	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.z	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Marmotini	ANCESTRAL SPECIES	31	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.z	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT01030000236530	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Marmotini_b	ANCESTRAL SPECIES	307																ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25
Arctic ground squirrel	MODERN SPECIES	837																KATNAL2 (ENSUPAG00010002731) #22	ENSUPAG00010002721 #23	HDHD2 (ENSUPAG00010002679) #24	SKOR2 (ENSUPAG00010002670) #25
Squirrel	MODERN SPECIES	558																KATNAL2 (ENSSTOG00000013527) #22	HDHD2 (ENSSTOG00000008527) #24	SKOR2 (ENSSTOG00000021346) #25
Alpin marmot	MODERN SPECIES	10	RIT2 (ENSMMMG00000007046)	SYT4 (ENSMMMG00000007022)	SETBP1 (ENSMMMG00000006996)	SLC14A2 (ENSMMMG00000006939)	SLC14A1 (ENSMMMG00000006914)	SIGLEC15 (ENSMMMG00000006905)	EPG5 (ENSMMMG00000006854)	PSTPIP2 (ENSMMMG00000006839)	ATP5F1A (ENSMMMG00000006823)	HAUS1 (ENSMMMG00000006810)	C18orf25 (ENSMMMG00000006777)	RNF165 (ENSMMMG00000006757)	LOXHD1 (ENSMMMG00000006669)	ST8SIA5 (ENSMMMG00000006633)	PIAS2 (ENSMMMG00000006515)	KATNAL2 (ENSMMMG00000006351) #22	HDHD2 (ENSMMMG00000006342) #24	ENSMMMG00000006338	SMAD2 (ENSMMMG00000006290)	ZBTB7C (ENSMMMG00000006278)	CTIF (ENSMMMG00000006232)	SMAD7 (ENSMMMG00000006202)	DYM (ENSMMMG00000006170)	C18orf32 (ENSMMMG00000006157)	ENSMMMG00000006135	LIPG (ENSMMMG00000006111)	ACAA2 (ENSMMMG00000006091)	MYO5B (ENSMMMG00000005915)	CFAP53 (ENSMMMG00000005890)	MBD1 (ENSMMMG00000005802)	CXXC1 (ENSMMMG00000005766)
Eurasian red squirrel	MODERN SPECIES	4	ENSSVLG00005015263	SETBP1 (ENSSVLG00005015356)	ENSSVLG00005015418	SLC14A1 (ENSSVLG00005015590)	SIGLEC15 (ENSSVLG00005015863)	EPG5 (ENSSVLG00005015968)	PSTPIP2 (ENSSVLG00005016011)	ENSSVLG00005016239	ATP5F1A (ENSSVLG00005016277)	HAUS1 (ENSSVLG00005016339)	C18orf25 (ENSSVLG00005016394)	RNF165 (ENSSVLG00005016476)	LOXHD1 (ENSSVLG00005016724)	ST8SIA5 (ENSSVLG00005018346)	ENSSVLG00005018588	KATNAL2 (ENSSVLG00005018737) #22	ENSSVLG00005019019	HDHD2 (ENSSVLG00005019073) #24	ENSSVLG00005019150 #23	SKOR2 (ENSSVLG00005019180) #25	ENSSVLG00005019379	ZBTB7C (ENSSVLG00005019433)	CTIF (ENSSVLG00005019619)	SMAD7 (ENSSVLG00005019787)	DYM (ENSSVLG00005019977)	ENSSVLG00005020326	ENSSVLG00005020364	LIPG (ENSSVLG00005020493)	ACAA2 (ENSSVLG00005020577)	MYO5B (ENSSVLG00005020740)	CFAP53 (ENSSVLG00005021141)
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029.q	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029.p	ENSGT00390000006029.q	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Guinea pig	MODERN SPECIES	14	ENSCPOG00000040621	PIK3C3 (ENSCPOG00000004375)	RIT2 (ENSCPOG00000009357)	SYT4 (ENSCPOG00000009941)	SETBP1 (ENSCPOG00000011164)	ENSCPOG00000007976	SLC14A1 (ENSCPOG00000007979)	EPG5 (ENSCPOG00000012114)	PSTPIP2 (ENSCPOG00000004876)	ATP5F1A (ENSCPOG00000012719)	HAUS1 (ENSCPOG00000012723)	RNF165 (ENSCPOG00000009298)	LOXHD1 (ENSCPOG00000009824)	ST8SIA5 (ENSCPOG00000030161)	ENSCPOG00000003067	KATNAL2 (ENSCPOG00000008150) #22	HDHD2 (ENSCPOG00000030325) #24	IER3IP1 (ENSCPOG00000040200) #23	SKOR2 (ENSCPOG00000021920) #25	SMAD2 (ENSCPOG00000013398)	ZBTB7C (ENSCPOG00000040464)	CTIF (ENSCPOG00000001049)	SMAD7 (ENSCPOG00000030295)	DYM (ENSCPOG00000013484)	C18orf32 (ENSCPOG00000034745)	ENSCPOG00000019337	LIPG (ENSCPOG00000008890)	ACAA2 (ENSCPOG00000004734)	MYO5B (ENSCPOG00000014213)	CFAP53 (ENSCPOG00000001668)	MBD1 (ENSCPOG00000001671)
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029.q	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Long-tailed chinchilla	MODERN SPECIES	109	ENSCLAG00000008619	SETBP1 (ENSCLAG00000010509)	SLC14A2 (ENSCLAG00000012015)	SLC14A1 (ENSCLAG00000007299)	SIGLEC15 (ENSCLAG00000007394)	EPG5 (ENSCLAG00000009230)	PSTPIP2 (ENSCLAG00000011006)	ENSCLAG00000015055	ATP5F1A (ENSCLAG00000014431)	HAUS1 (ENSCLAG00000012155)	C18orf25 (ENSCLAG00000008611)	RNF165 (ENSCLAG00000009534)	LOXHD1 (ENSCLAG00000011718)	ST8SIA5 (ENSCLAG00000012639)	ENSCLAG00000011621	KATNAL2 (ENSCLAG00000013657) #22	HDHD2 (ENSCLAG00000006391) #24	IER3IP1 (ENSCLAG00000007652) #23	SKOR2 (ENSCLAG00000012544) #25	SMAD2 (ENSCLAG00000011258)	ZBTB7C (ENSCLAG00000012082)	CTIF (ENSCLAG00000008174)	SMAD7 (ENSCLAG00000007063)	DYM (ENSCLAG00000008080)	C18orf32 (ENSCLAG00000008711)	ENSCLAG00000008914	ENSCLAG00000010369	LIPG (ENSCLAG00000011863)	ENSCLAG00000007196	ENSCLAG00000008597	ACAA2 (ENSCLAG00000008998)
Degu	MODERN SPECIES	44	SIGLEC15 (ENSODEG00000018459)	EPG5 (ENSODEG00000018404)	PSTPIP2 (ENSODEG00000018461)	ENSODEG00000018334	ENSODEG00000020534	ATP5F1A (ENSODEG00000018359)	ENSODEG00000018366	C18orf25 (ENSODEG00000018458)	RNF165 (ENSODEG00000018412)	LOXHD1 (ENSODEG00000018482)	ENSODEG00000020498	ST8SIA5 (ENSODEG00000018352)	ENSODEG00000018432	ENSODEG00000020536	ENSODEG00000018457	KATNAL2 (ENSODEG00000018481) #22	HDHD2 (ENSODEG00000018388) #24	IER3IP1 (ENSODEG00000018375) #23	SKOR2 (ENSODEG00000018363) #25	ENSODEG00000018367	ENSODEG00000018340	ENSODEG00000018377	SMAD2 (ENSODEG00000018373)	ZBTB7C (ENSODEG00000018417)	CTIF (ENSODEG00000018390)	SMAD7 (ENSODEG00000018424)	DYM (ENSODEG00000018486)	ENSODEG00000018393	ENSODEG00000018365	ENSODEG00000018460	ENSODEG00000020491
Naked mole-rat female	MODERN SPECIES	9	ENSHGLG00000040364	ENSHGLG00000033588	ENSHGLG00000046959	ENSHGLG00000005880	SLC14A1 (ENSHGLG00000007316)	PSTPIP2 (ENSHGLG00000005740)	ENSHGLG00000009522	ENSHGLG00000036850	ENSHGLG00000036445	C18orf25 (ENSHGLG00000041108)	RNF165 (ENSHGLG00000035767)	ENSHGLG00000006211	ST8SIA5 (ENSHGLG00000040367)	PIAS2 (ENSHGLG00000015588)	ENSHGLG00000040167	ENSHGLG00000034217 #22	HDHD2 (ENSHGLG00000010130) #24	ENSHGLG00000048898 #23	SKOR2 (ENSHGLG00000035792) #25	SMAD2 (ENSHGLG00000008711)	ENSHGLG00000031912	ENSHGLG00000042101	ENSHGLG00000048272	ENSHGLG00000040505	ENSHGLG00000015030	ENSHGLG00000009081	ENSHGLG00000036153	ENSHGLG00000047452	LIPG (ENSHGLG00000010224)	ENSHGLG00000006292	ENSHGLG00000038847
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Myomorpha	ANCESTRAL SPECIES	35	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Muroidea	ANCESTRAL SPECIES	13	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a.e	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.u	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Cricetinae	ANCESTRAL SPECIES	14				ENSGT00390000018729.a.b	ENSGT00390000018729.a.a.e	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.u	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Chinese hamster chok1gshd	MODERN SPECIES	314	Setbp1 (ENSCGRG00001003049)	ENSCGRG00001002557	Slc14a2 (ENSCGRG00001015350)	Slc14a1 (ENSCGRG00001014682)	ENSCGRG00001014534	Siglec15 (ENSCGRG00001014278)	Epg5 (ENSCGRG00001013764)	Pstpip2 (ENSCGRG00001012933)	Atp5a1 (ENSCGRG00001012335)	Haus1 (ENSCGRG00001012089)	8030462N17Rik (ENSCGRG00001011465)	Rnf165 (ENSCGRG00001011050)	Loxhd1 (ENSCGRG00001009440)	St8sia5 (ENSCGRG00001004611)	Pias2 (ENSCGRG00001023617)	Katnal2 (ENSCGRG00001010923) #22	Hdhd2 (ENSCGRG00001009445) #24	Skor2 (ENSCGRG00001007925) #25	Smad2 (ENSCGRG00001006348)	Zbtb7c (ENSCGRG00001005320)
Golden Hamster	MODERN SPECIES	680	Toporsl (ENSMAUG00000021881)	ENSMAUG00000014437	ENSMAUG00000006240	ENSMAUG00000018876	Slc14a1 (ENSMAUG00000014121)	Siglec15 (ENSMAUG00000000352)	Epg5 (ENSMAUG00000019707)	Pstpip2 (ENSMAUG00000014774)	Atp5f1a (ENSMAUG00000019838)	Haus1 (ENSMAUG00000009723)	8030462N17Rik (ENSMAUG00000006561)	Rnf165 (ENSMAUG00000017550)	Loxhd1 (ENSMAUG00000010353)	St8sia5 (ENSMAUG00000011966)	Pias2 (ENSMAUG00000014565)	Katnal2 (ENSMAUG00000019836) #22	Hdhd2 (ENSMAUG00000019526) #24	ENSMAUG00000012040 #23	Skor2 (ENSMAUG00000016006) #25	Smad2 (ENSMAUG00000006737)	Zbtb7c (ENSMAUG00000000374)	Ctif (ENSMAUG00000000656)	Smad7 (ENSMAUG00000020326)	ENSMAUG00000020878	Dym (ENSMAUG00000017721)	BC031181 (ENSMAUG00000019483)	Rpl17 (ENSMAUG00000015927)	Lipg (ENSMAUG00000000351)	Acaa2 (ENSMAUG00000018671)	Myo5b (ENSMAUG00000000930)	ENSMAUG00000010397
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a.e	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.u	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Northern American deer mouse	MODERN SPECIES	10	ENSPEMG00000006471	Setbp1 (ENSPEMG00000021869)	ENSPEMG00000022112	Slc14a1 (ENSPEMG00000008835)	ENSPEMG00000028869	Siglec15 (ENSPEMG00000024146)	Epg5 (ENSPEMG00000022153)	Pstpip2 (ENSPEMG00000022379)	Atp5a1 (ENSPEMG00000022004)	Haus1 (ENSPEMG00000021388)	8030462N17Rik (ENSPEMG00000010341)	ENSPEMG00000029031	Loxhd1 (ENSPEMG00000022919)	St8sia5 (ENSPEMG00000022119)	Pias2 (ENSPEMG00000022220)	Katnal2 (ENSPEMG00000021096) #22	Hdhd2 (ENSPEMG00000020912) #24	ENSPEMG00000026193 #23	Skor2 (ENSPEMG00000022190) #25	Smad2 (ENSPEMG00000020383)	Zbtb7c (ENSPEMG00000020629)	Ctif (ENSPEMG00000022746)	Smad7 (ENSPEMG00000021331)	Dym (ENSPEMG00000020826)	Rpl17 (ENSPEMG00000001520)	Lipg (ENSPEMG00000021868)	ENSPEMG00000028900	ENSPEMG00000025726	Acaa2 (ENSPEMG00000022034)	Myo5b (ENSPEMG00000020539)	Cfap53 (ENSPEMG00000024092)
Prairie vole	MODERN SPECIES	5	ENSMOCG00000019582	Pard6g (ENSMOCG00000019881)	Setbp1 (ENSMOCG00000021557)	Slc14a2 (ENSMOCG00000013965)	ENSMOCG00000002421	Siglec15 (ENSMOCG00000007709)	Epg5 (ENSMOCG00000015567)	Pstpip2 (ENSMOCG00000006361)	Atp5a1 (ENSMOCG00000009175)	Haus1 (ENSMOCG00000011366)	8030462N17Rik (ENSMOCG00000000844)	ENSMOCG00000019837	Loxhd1 (ENSMOCG00000016732)	St8sia5 (ENSMOCG00000011361)	Pias2 (ENSMOCG00000015605)	Katnal2 (ENSMOCG00000011716) #22	Hdhd2 (ENSMOCG00000008063) #24	ENSMOCG00000009073 #23	Skor2 (ENSMOCG00000018264) #25	Smad2 (ENSMOCG00000017648)	Zbtb7c (ENSMOCG00000017640)	Ctif (ENSMOCG00000020507)	Smad7 (ENSMOCG00000001269)	Dym (ENSMOCG00000022593)	BC031181 (ENSMOCG00000012446)	Rpl17 (ENSMOCG00000012741)	Lipg (ENSMOCG00000020738)	Acaa2 (ENSMOCG00000004236)	Myo5b (ENSMOCG00000022368)	ENSMOCG00000008152	ENSMOCG00000011976
Murinae	ANCESTRAL SPECIES	17	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00940000168426
Mus	ANCESTRAL SPECIES	19	ENSGT00530000063631.a	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.c #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00940000168426
Mus_A	ANCESTRAL SPECIES	19	ENSGT01100000265037	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.c #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00940000168426
Mus_B	ANCESTRAL SPECIES	19	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.c #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00940000168426
Mus_C	ANCESTRAL SPECIES	16	ENSGT00950000183211.a.b	ENSGT00940000158784	ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.c #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Steppe mouse	MODERN SPECIES	3130															ENSMSIG00000018626	Katnal2 (ENSMSIG00000018633) #22	Hdhd2 (ENSMSIG00000018790) #24	ENSMSIG00000018819 #23	Skor2 (ENSMSIG00000018834) #25	Smad2 (ENSMSIG00000018887)	ENSMSIG00000018946	Zbtb7c (ENSMSIG00000018967)	Ctif (ENSMSIG00000019005)	ENSMSIG00000019110	Smad7 (ENSMSIG00000019123)	Dym (ENSMSIG00000019180)	ENSMSIG00000019247	BC031181 (ENSMSIG00000019259)	Rpl17 (ENSMSIG00000019275)	Lipg (ENSMSIG00000019321)	ENSMSIG00000019349
spretus	MODERN SPECIES	9	Eola1 (MGP_SPRETEiJ_G0023343)	Setbp1 (MGP_SPRETEiJ_G0023342)	MGP_SPRETEiJ_G0023341	Slc14a2 (MGP_SPRETEiJ_G0023340)	Slc14a1 (MGP_SPRETEiJ_G0023339)	Siglec15 (MGP_SPRETEiJ_G0023338)	Epg5 (MGP_SPRETEiJ_G0023337)	Pstpip2 (MGP_SPRETEiJ_G0023336)	Atp5a1 (MGP_SPRETEiJ_G0023335)	Haus1 (MGP_SPRETEiJ_G0023334)	8030462N17Rik (MGP_SPRETEiJ_G0023333)	Loxhd1 (MGP_SPRETEiJ_G0023331)	St8sia5 (MGP_SPRETEiJ_G0023330)	MGP_SPRETEiJ_G0023329	Pias2 (MGP_SPRETEiJ_G0023328)	Katnal2 (MGP_SPRETEiJ_G0023327) #22	Hdhd2 (MGP_SPRETEiJ_G0023326) #24	MGP_SPRETEiJ_G0023325 #23	Skor2 (MGP_SPRETEiJ_G0023324) #25	Smad2 (MGP_SPRETEiJ_G0023323)	Zbtb7c (MGP_SPRETEiJ_G0023322)	Ctif (MGP_SPRETEiJ_G0023321)	Smad7 (MGP_SPRETEiJ_G0023320)	Dym (MGP_SPRETEiJ_G0023319)	BC031181 (MGP_SPRETEiJ_G0023318)	MGP_SPRETEiJ_G0023317	Lipg (MGP_SPRETEiJ_G0023316)	Acaa2 (MGP_SPRETEiJ_G0023315)	Myo5b (MGP_SPRETEiJ_G0023314)	Cfap53 (MGP_SPRETEiJ_G0023313)	Cxxc1 (MGP_SPRETEiJ_G0023312)
Mouse	MODERN SPECIES	9	Pard6g (ENSMUSG00000056214)	Setbp1 (ENSMUSG00000024548)	Gm6133 (ENSMUSG00000090451)	Slc14a2 (ENSMUSG00000024552)	Slc14a1 (ENSMUSG00000059336)	Siglec15 (ENSMUSG00000091055)	Epg5 (ENSMUSG00000039840)	Pstpip2 (ENSMUSG00000025429)	Atp5a1 (ENSMUSG00000025428)	Haus1 (ENSMUSG00000041840)	8030462N17Rik (ENSMUSG00000047466)	Rnf165 (ENSMUSG00000025427)	Loxhd1 (ENSMUSG00000032818)	St8sia5 (ENSMUSG00000025425)	Pias2 (ENSMUSG00000025423)	Katnal2 (ENSMUSG00000025420) #22	Hdhd2 (ENSMUSG00000025421) #24	Ier3ip1 (ENSMUSG00000090000)	Skor2 (ENSMUSG00000091519) #25	Smad2 (ENSMUSG00000024563)	Zbtb7c (ENSMUSG00000044646)	Ctif (ENSMUSG00000052928)	Smad7 (ENSMUSG00000025880)	Dym (ENSMUSG00000035765)	BC031181 (ENSMUSG00000036299)	Rpl17 (ENSMUSG00000062328)	Lipg (ENSMUSG00000053846)	Acaa2 (ENSMUSG00000036880)	Myo5b (ENSMUSG00000025885)	Cfap53 (ENSMUSG00000035394)	Mbd1 (ENSMUSG00000024561)
Ryukyu mouse	MODERN SPECIES	9	Setbp1 (MGP_CAROLIEiJ_G0022429)	MGP_CAROLIEiJ_G0022428	Slc14a2 (MGP_CAROLIEiJ_G0022427)	Slc14a1 (MGP_CAROLIEiJ_G0022426)	Siglec15 (MGP_CAROLIEiJ_G0022425)	MGP_CAROLIEiJ_G0022424	Pstpip2 (MGP_CAROLIEiJ_G0022423)	Atp5a1 (MGP_CAROLIEiJ_G0022422)	Haus1 (MGP_CAROLIEiJ_G0022421)	8030462N17Rik (MGP_CAROLIEiJ_G0022420)	Rnf165 (MGP_CAROLIEiJ_G0022419)	Loxhd1 (MGP_CAROLIEiJ_G0022418)	St8sia5 (MGP_CAROLIEiJ_G0022417)	MGP_CAROLIEiJ_G0022416	Pias2 (MGP_CAROLIEiJ_G0022415)	Katnal2 (MGP_CAROLIEiJ_G0022414) #22	Hdhd2 (MGP_CAROLIEiJ_G0022413) #24	MGP_CAROLIEiJ_G0022412 #23	Skor2 (MGP_CAROLIEiJ_G0022411) #25	Smad2 (MGP_CAROLIEiJ_G0022410)	Zbtb7c (MGP_CAROLIEiJ_G0022409)	Ctif (MGP_CAROLIEiJ_G0022408)	Smad7 (MGP_CAROLIEiJ_G0022407)	Dym (MGP_CAROLIEiJ_G0022406)	BC031181 (MGP_CAROLIEiJ_G0022405)	Rpl17 (MGP_CAROLIEiJ_G0022404)	Lipg (MGP_CAROLIEiJ_G0022403)	Acaa2 (MGP_CAROLIEiJ_G0022402)	Myo5b (MGP_CAROLIEiJ_G0022401)	Cfap53 (MGP_CAROLIEiJ_G0022400)	Cxxc1 (MGP_CAROLIEiJ_G0022399)
Shrew mouse	MODERN SPECIES	6	Setbp1 (MGP_PahariEiJ_G0019158)	MGP_PahariEiJ_G0019157	Slc14a2 (MGP_PahariEiJ_G0019156)	Slc14a1 (MGP_PahariEiJ_G0019155)	Siglec15 (MGP_PahariEiJ_G0019154)	Epg5 (MGP_PahariEiJ_G0019153)	Pstpip2 (MGP_PahariEiJ_G0019152)	Atp5a1 (MGP_PahariEiJ_G0019151)	Haus1 (MGP_PahariEiJ_G0019150)	8030462N17Rik (MGP_PahariEiJ_G0019149)	Rnf165 (MGP_PahariEiJ_G0019148)	MGP_PahariEiJ_G0019147	St8sia5 (MGP_PahariEiJ_G0019146)	MGP_PahariEiJ_G0019145	Pias2 (MGP_PahariEiJ_G0019144)	Katnal2 (MGP_PahariEiJ_G0019143) #22	Hdhd2 (MGP_PahariEiJ_G0019142) #24	MGP_PahariEiJ_G0019141 #23	Skor2 (MGP_PahariEiJ_G0019140) #25	Smad2 (MGP_PahariEiJ_G0019139)	Zbtb7c (MGP_PahariEiJ_G0019138)	Ctif (MGP_PahariEiJ_G0019137)	Smad7 (MGP_PahariEiJ_G0019136)	Dym (MGP_PahariEiJ_G0019135)	BC031181 (MGP_PahariEiJ_G0019134)	Rpl17 (MGP_PahariEiJ_G0019133)	Lipg (MGP_PahariEiJ_G0019132)	Acaa2 (MGP_PahariEiJ_G0019131)	Myo5b (MGP_PahariEiJ_G0019130)	Cfap53 (MGP_PahariEiJ_G0019129)	MGP_PahariEiJ_G0019128
Rat	MODERN SPECIES	9	ENSRNOG00000065450	Setbp1 (ENSRNOG00000016208)	Slc14a2 (ENSRNOG00000061714)	Slc14a1 (ENSRNOG00000016753)	Siglec15 (ENSRNOG00000033588)	Epg5 (ENSRNOG00000052894)	Pstpip2 (ENSRNOG00000016987)	Atp5f1a (ENSRNOG00000017032)	Haus1 (ENSRNOG00000017067)	ENSRNOG00000063575	RGD1308601 (ENSRNOG00000017215)	Rnf165 (ENSRNOG00000048824)	Loxhd1 (ENSRNOG00000017410)	St8sia5 (ENSRNOG00000022691)	Pias2 (ENSRNOG00000017493)	Katnal2 (ENSRNOG00000017788) #22	Ier3ip1 (ENSRNOG00000043171) #24	Skor2 (ENSRNOG00000018006) #25	Smad2 (ENSRNOG00000018140)	Zbtb7c (ENSRNOG00000047924)	ENSRNOG00000067472	Ctif (ENSRNOG00000018342)	Smad7 (ENSRNOG00000018359)	Dym (ENSRNOG00000018425)	Rpl17 (ENSRNOG00000018680)	Slc25a6 (ENSRNOG00000042387)	Lipg (ENSRNOG00000018694)	Acaa2 (ENSRNOG00000013766)	Myo5b (ENSRNOG00000014104)	Mbd1 (ENSRNOG00000024104)	Cfap53 (ENSRNOG00000014585)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1888	Mc5r (ENSNGAG00000008073)	Mc2r (ENSNGAG00000014364)	Setbp1 (ENSNGAG00000016368)	ENSNGAG00000015050	Slc14a1 (ENSNGAG00000014056)	Siglec15 (ENSNGAG00000013867)	Epg5 (ENSNGAG00000005612)	Pstpip2 (ENSNGAG00000018122)	Atp5a1 (ENSNGAG00000009807)	Haus1 (ENSNGAG00000001553)	8030462N17Rik (ENSNGAG00000014428)	Rnf165 (ENSNGAG00000012965)	Loxhd1 (ENSNGAG00000020158)	St8sia5 (ENSNGAG00000017269)	Pias2 (ENSNGAG00000010511)	Katnal2 (ENSNGAG00000010954) #22	Hdhd2 (ENSNGAG00000000250) #24	ENSNGAG00000020722 #23	Skor2 (ENSNGAG00000018430) #25	Smad2 (ENSNGAG00000013343)	Zbtb7c (ENSNGAG00000012022)	Ctif (ENSNGAG00000011452)	Smad7 (ENSNGAG00000004962)	ENSNGAG00000001549	Dym (ENSNGAG00000020852)
Lesser Egyptian jerboa	MODERN SPECIES	60	Mc2r (ENSJJAG00000000906)	ENSJJAG00000000736	Setbp1 (ENSJJAG00000004320)	ENSJJAG00000021572	Slc14a1 (ENSJJAG00000009670)	Siglec15 (ENSJJAG00000011775)	Epg5 (ENSJJAG00000008036)	Pstpip2 (ENSJJAG00000011600)	ENSJJAG00000022136	ENSJJAG00000014908	8030462N17Rik (ENSJJAG00000015948)	Rnf165 (ENSJJAG00000014596)	Loxhd1 (ENSJJAG00000012049)	St8sia5 (ENSJJAG00000023613)	ENSJJAG00000021561	Katnal2 (ENSJJAG00000013360) #22	Hdhd2 (ENSJJAG00000020515) #24	ENSJJAG00000009768 #23	Skor2 (ENSJJAG00000013235) #25	Smad2 (ENSJJAG00000021902)	ENSJJAG00000000783	Zbtb7c (ENSJJAG00000005484)	ENSJJAG00000000639	Ctif (ENSJJAG00000013706)	Smad7 (ENSJJAG00000017342)	ENSJJAG00000011224	ENSJJAG00000014372	ENSJJAG00000011899	Dym (ENSJJAG00000000543)	BC031181 (ENSJJAG00000013965)	ENSJJAG00000017312
Kangaroo rat	MODERN SPECIES	362																Katnal2 (ENSDORG00000005500) #22	Hdhd2 (ENSDORG00000012417) #24	ENSDORG00000027748 #23	Skor2 (ENSDORG00000012420) #25	Smad2 (ENSDORG00000013015)	Zbtb7c (ENSDORG00000002188)	Ctif (ENSDORG00000003221)	Smad7 (ENSDORG00000001837)	Dym (ENSDORG00000029874)	BC031181 (ENSDORG00000000327)	ENSDORG00000026216	Lipg (ENSDORG00000015147)	Acaa2 (ENSDORG00000012365)	Myo5b (ENSDORG00000013047)	ENSDORG00000013915	Mbd1 (ENSDORG00000013917)
Lagomorpha	ANCESTRAL SPECIES	29	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.a.a.a.b.k	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000265446	ENSGT00950000183005.a.a
Pika	MODERN SPECIES	7239																KATNAL2 (ENSOPRG00000012822) #22	IER3IP1 (ENSOPRG00000012860) #23	ENSOPRG00000018601 #25
Rabbit	MODERN SPECIES	20	PIK3C3 (ENSOCUG00000009451)	RIT2 (ENSOCUG00000003652)	SYT4 (ENSOCUG00000009669)	SETBP1 (ENSOCUG00000009706)	ENSOCUG00000006749	SLC14A1 (ENSOCUG00000006758)	SIGLEC15 (ENSOCUG00000023340)	EPG5 (ENSOCUG00000003950)	PSTPIP2 (ENSOCUG00000000324)	ENSOCUG00000003967	HAUS1 (ENSOCUG00000017483)	C18orf25 (ENSOCUG00000009573)	RNF165 (ENSOCUG00000011801)	ENSOCUG00000033989	PIAS2 (ENSOCUG00000006900)	KATNAL2 (ENSOCUG00000006971) #22	ENSOCUG00000006940	ENSOCUG00000035984	HDHD2 (ENSOCUG00000006979) #24	IER3IP1 (ENSOCUG00000012555) #23	ENSOCUG00000027573 #25	SMAD2 (ENSOCUG00000011290)	ZBTB7C (ENSOCUG00000022348)	ENSOCUG00000026631	CTIF (ENSOCUG00000024842)	SMAD7 (ENSOCUG00000024309)	DYM (ENSOCUG00000015851)	ENSOCUG00000038051	ENSOCUG00000027094	ENSOCUG00000012485	LIPG (ENSOCUG00000013471)
Tree shrew	MODERN SPECIES	3486															ENSTBEG00000005779	KATNAL2 (ENSTBEG00000005955) #22	HDHD2 (ENSTBEG00000006418) #24
Primates	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.s	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.s	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Mouse lemur	MODERN SPECIES	10	SYT4 (ENSMICG00000027289)	SETBP1 (ENSMICG00000017494)	SLC14A2 (ENSMICG00000017495)	SLC14A1 (ENSMICG00000017496)	SIGLEC15 (ENSMICG00000017497)	EPG5 (ENSMICG00000017498)	PSTPIP2 (ENSMICG00000017499)	ENSMICG00000028901	HAUS1 (ENSMICG00000017501)	C18orf25 (ENSMICG00000004834)	RNF165 (ENSMICG00000011741)	LOXHD1 (ENSMICG00000001316)	ENSMICG00000017500	ST8SIA5 (ENSMICG00000013224)	PIAS2 (ENSMICG00000013229)	KATNAL2 (ENSMICG00000007857) #22	HDHD2 (ENSMICG00000042121) #24	IER3IP1 (ENSMICG00000043887) #23	SKOR2 (ENSMICG00000031129) #25	SMAD2 (ENSMICG00000007882)	ZBTB7C (ENSMICG00000038331)	CTIF (ENSMICG00000010167)	SMAD7 (ENSMICG00000034183)	DYM (ENSMICG00000017535)	C18orf32 (ENSMICG00000042525)	ENSMICG00000017102	LIPG (ENSMICG00000017104)	ACAA2 (ENSMICG00000005278)	MYO5B (ENSMICG00000005287)	CFAP53 (ENSMICG00000006410)	MBD1 (ENSMICG00000006414)
Lemuriformes_a	ANCESTRAL SPECIES	62	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.s	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Coquerels sifaka	MODERN SPECIES	262			SETBP1 (ENSPCOG00000022384)	SLC14A2 (ENSPCOG00000003875)	SLC14A1 (ENSPCOG00000027560)	SIGLEC15 (ENSPCOG00000026160)	EPG5 (ENSPCOG00000026516)	PSTPIP2 (ENSPCOG00000021273)	ATP5F1A (ENSPCOG00000017027)	HAUS1 (ENSPCOG00000024124)	C18orf25 (ENSPCOG00000026561)	RNF165 (ENSPCOG00000017842)	LOXHD1 (ENSPCOG00000027350)	ST8SIA5 (ENSPCOG00000021186)	PIAS2 (ENSPCOG00000028397)	KATNAL2 (ENSPCOG00000013440) #22	HDHD2 (ENSPCOG00000024401) #24	IER3IP1 (ENSPCOG00000000443) #23	SKOR2 (ENSPCOG00000016973) #25	SMAD2 (ENSPCOG00000000934)	ZBTB7C (ENSPCOG00000019918)	CTIF (ENSPCOG00000013391)	SMAD7 (ENSPCOG00000003237)	DYM (ENSPCOG00000010198)	C18orf32 (ENSPCOG00000028796)	ENSPCOG00000024759	LIPG (ENSPCOG00000017489)	ACAA2 (ENSPCOG00000021233)
Greater bamboo lemur	MODERN SPECIES	606														ST8SIA5 (ENSPSMG00000018127)	PIAS2 (ENSPSMG00000018197)	KATNAL2 (ENSPSMG00000018239) #22	ENSPSMG00000018244	HDHD2 (ENSPSMG00000018254) #24	ENSPSMG00000018261 #23	SKOR2 (ENSPSMG00000018268) #25	SMAD2 (ENSPSMG00000018402)	ZBTB7C (ENSPSMG00000018657)	CTIF (ENSPSMG00000018691)	SMAD7 (ENSPSMG00000018729)	DYM (ENSPSMG00000018799)	ENSPSMG00000018846	ENSPSMG00000018857	LIPG (ENSPSMG00000018901)	ACAA2 (ENSPSMG00000018945)	MYO5B (ENSPSMG00000019098)	CFAP53 (ENSPSMG00000019120)
Bushbaby	MODERN SPECIES	127	SYT4 (ENSOGAG00000003595)	ENSOGAG00000029062	SETBP1 (ENSOGAG00000010412)	SLC14A2 (ENSOGAG00000016395)	SLC14A1 (ENSOGAG00000016407)	SIGLEC15 (ENSOGAG00000024686)	ENSOGAG00000029113	PSTPIP2 (ENSOGAG00000007141)	ENSOGAG00000026684	HAUS1 (ENSOGAG00000005096)	C18orf25 (ENSOGAG00000005093)	RNF165 (ENSOGAG00000025147)	LOXHD1 (ENSOGAG00000012621)	ST8SIA5 (ENSOGAG00000012633)	PIAS2 (ENSOGAG00000012636)	KATNAL2 (ENSOGAG00000016612) #22	HDHD2 (ENSOGAG00000016619) #24	IER3IP1 (ENSOGAG00000016626) #23	SKOR2 (ENSOGAG00000032696) #25	SMAD2 (ENSOGAG00000000443)	ZBTB7C (ENSOGAG00000000444)	CTIF (ENSOGAG00000013927)	SMAD7 (ENSOGAG00000013932)	DYM (ENSOGAG00000013935)	ENSOGAG00000029213	LIPG (ENSOGAG00000016524)	ACAA2 (ENSOGAG00000016527)	MYO5B (ENSOGAG00000016529)	ENSOGAG00000003781	MBD1 (ENSOGAG00000003784)	CXXC1 (ENSOGAG00000033715)
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394	ENSGT01030000234626.D.k
Hominidae	ANCESTRAL SPECIES	24	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394	ENSGT01030000234626.D.k	ENSGT00940000155402.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394	ENSGT01030000234626.D.k
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394	ENSGT01030000234626.D.k	ENSGT00940000155402.a.b.gb
Pan	ANCESTRAL SPECIES	24	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00390000016823.q	ENSGT00910000148711	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00910000147179	ENSGT01100000265012	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000013264.c.a
Bonobo	MODERN SPECIES	9	SYT4 (ENSPPAG00000035230)	SETBP1 (ENSPPAG00000037611)	SLC14A2 (ENSPPAG00000036617)	SLC14A1 (ENSPPAG00000012434)	SIGLEC15 (ENSPPAG00000018825)	EPG5 (ENSPPAG00000025948)	PSTPIP2 (ENSPPAG00000028251)	ENSPPAG00000028807	ATP5F1A (ENSPPAG00000030055)	HAUS1 (ENSPPAG00000034062)	C18orf25 (ENSPPAG00000034677)	RNF165 (ENSPPAG00000035141)	LOXHD1 (ENSPPAG00000023447)	ST8SIA5 (ENSPPAG00000032695)	PIAS2 (ENSPPAG00000035511)	KATNAL2 (ENSPPAG00000019290) #22	ENSPPAG00000027606	ENSPPAG00000028060	HDHD2 (ENSPPAG00000028597) #24	IER3IP1 (ENSPPAG00000029166) #23	ENSPPAG00000030667	ENSPPAG00000032994	SMAD2 (ENSPPAG00000035419)	ZBTB7C (ENSPPAG00000039903)	ENSPPAG00000033132	ENSPPAG00000041550	CTIF (ENSPPAG00000023554)	ENSPPAG00000031318	DYM (ENSPPAG00000033907)	C18orf32 (ENSPPAG00000027512)	ENSPPAG00000028848
Chimpanzee	MODERN SPECIES	9	SYT4 (ENSPTRG00000009985)	SETBP1 (ENSPTRG00000009986)	SLC14A2 (ENSPTRG00000009987)	SLC14A1 (ENSPTRG00000009988)	SIGLEC15 (ENSPTRG00000024035)	EPG5 (ENSPTRG00000009989)	PSTPIP2 (ENSPTRG00000009990)	ENSPTRG00000051812	ATP5F1A (ENSPTRG00000009991)	HAUS1 (ENSPTRG00000009992)	C18orf25 (ENSPTRG00000009993)	RNF165 (ENSPTRG00000009994)	LOXHD1 (ENSPTRG00000009995)	ST8SIA5 (ENSPTRG00000009997)	PIAS2 (ENSPTRG00000009998)	KATNAL2 (ENSPTRG00000009999) #22	ENSPTRG00000041809	ELOA2 (ENSPTRG00000029302)	HDHD2 (ENSPTRG00000010001) #24	IER3IP1 (ENSPTRG00000010002) #23	SKOR2 (ENSPTRG00000033850) #25	ENSPTRG00000051288	ENSPTRG00000049336	ENSPTRG00000051707	SMAD2 (ENSPTRG00000043695)	ZBTB7C (ENSPTRG00000010006)	ENSPTRG00000050449	ENSPTRG00000045008	CTIF (ENSPTRG00000010009)	SMAD7 (ENSPTRG00000010010)	DYM (ENSPTRG00000010011)
Human	MODERN SPECIES	9	RIT2 (ENSG00000152214)	SYT4 (ENSG00000132872)	SETBP1 (ENSG00000152217)	SLC14A2 (ENSG00000132874)	SLC14A1 (ENSG00000141469)	EPG5 (ENSG00000152223)	SIGLEC15 (ENSG00000197046)	PSTPIP2 (ENSG00000152229)	ATP5F1A (ENSG00000152234)	HAUS1 (ENSG00000152240)	C18orf25 (ENSG00000152242)	RNF165 (ENSG00000141622)	LOXHD1 (ENSG00000167210)	ST8SIA5 (ENSG00000101638)	PIAS2 (ENSG00000078043)	KATNAL2 (ENSG00000167216) #22	ELOA2 (ENSG00000206181)	HDHD2 (ENSG00000167220) #24	IER3IP1 (ENSG00000134049) #23	SKOR2 (ENSG00000215474) #25	SMAD2 (ENSG00000175387)	ZBTB7C (ENSG00000184828)	CTIF (ENSG00000134030)	SMAD7 (ENSG00000101665)	DYM (ENSG00000141627)	C18orf32 (ENSG00000177576)	RPL17-C18orf32 (ENSG00000215472)	RPL17 (ENSG00000265681)	LIPG (ENSG00000101670)	ACAA2 (ENSG00000167315)	MYO5B (ENSG00000167306)
Gorilla	MODERN SPECIES	9	RIT2 (ENSGGOG00000005603)	SYT4 (ENSGGOG00000006097)	SETBP1 (ENSGGOG00000014151)	SLC14A2 (ENSGGOG00000001047)	SLC14A1 (ENSGGOG00000008152)	SIGLEC15 (ENSGGOG00000007810)	EPG5 (ENSGGOG00000007816)	PSTPIP2 (ENSGGOG00000025030)	ENSGGOG00000041127	ATP5F1A (ENSGGOG00000016560)	HAUS1 (ENSGGOG00000010098)	RNF165 (ENSGGOG00000005584)	LOXHD1 (ENSGGOG00000005588)	ST8SIA5 (ENSGGOG00000013794)	PIAS2 (ENSGGOG00000025821)	KATNAL2 (ENSGGOG00000006796) #22	ENSGGOG00000040155	ENSGGOG00000041035	ENSGGOG00000044154	ENSGGOG00000010534	HDHD2 (ENSGGOG00000016414) #24	IER3IP1 (ENSGGOG00000027939) #23	ENSGGOG00000022397	SKOR2 (ENSGGOG00000006679) #25	ENSGGOG00000037285	SMAD2 (ENSGGOG00000004706)	ZBTB7C (ENSGGOG00000008438)	ENSGGOG00000022625	ENSGGOG00000037898	CTIF (ENSGGOG00000015204)	ENSGGOG00000010554
Orangutan	MODERN SPECIES	9	RIT2 (ENSPPYG00000009121)	SYT4 (ENSPPYG00000009122)	SETBP1 (ENSPPYG00000009123)	SLC14A2 (ENSPPYG00000009124)	SLC14A1 (ENSPPYG00000009125)	SIGLEC15 (ENSPPYG00000009127)	EPG5 (ENSPPYG00000009128)	PSTPIP2 (ENSPPYG00000009129)	ATP5F1A (ENSPPYG00000009130)	HAUS1 (ENSPPYG00000009131)	C18H18orf25 (ENSPPYG00000009132)	RNF165 (ENSPPYG00000009133)	LOXHD1 (ENSPPYG00000009134)	ST8SIA5 (ENSPPYG00000009135)	PIAS2 (ENSPPYG00000009136)	KATNAL2 (ENSPPYG00000009138) #22	ENSPPYG00000009137	HDHD2 (ENSPPYG00000009139) #24	IER3IP1 (ENSPPYG00000009140) #23	SKOR2 (ENSPPYG00000009142) #25	ENSPPYG00000030833	ENSPPYG00000037397	SMAD2 (ENSPPYG00000009144)	ZBTB7C (ENSPPYG00000009145)	CTIF (ENSPPYG00000009147)	SMAD7 (ENSPPYG00000009148)	DYM (ENSPPYG00000009149)	C18orf32 (ENSPPYG00000033389)	ENSPPYG00000009151	LIPG (ENSPPYG00000009153)	ACAA2 (ENSPPYG00000009154)
Gibbon	MODERN SPECIES	19	SIGLEC15 (ENSNLEG00000010918)	EPG5 (ENSNLEG00000010921)	PSTPIP2 (ENSNLEG00000010965)	ATP5F1A (ENSNLEG00000010973)	HAUS1 (ENSNLEG00000011216)	C18orf25 (ENSNLEG00000011251)	RNF165 (ENSNLEG00000011270)	LOXHD1 (ENSNLEG00000011276)	ST8SIA5 (ENSNLEG00000011343)	PIAS2 (ENSNLEG00000011351)	ENSNLEG00000032966	ENSNLEG00000031576	ENSNLEG00000034552	ENSNLEG00000026544	ELOA2 (ENSNLEG00000011422)	KATNAL2 (ENSNLEG00000011402) #22	HDHD2 (ENSNLEG00000036069) #24	ENSNLEG00000029962	IER3IP1 (ENSNLEG00000011450) #23	ENSNLEG00000029297 #25	ENSNLEG00000029516	ENSNLEG00000011462	SMAD2 (ENSNLEG00000011463)	ZBTB7C (ENSNLEG00000011492)	ENSNLEG00000011500	ENSNLEG00000030200	CTIF (ENSNLEG00000011503)	SMAD7 (ENSNLEG00000034951)	ENSNLEG00000032202	ENSNLEG00000011539	C18orf32 (ENSNLEG00000011553)
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Vervet Monkey	MODERN SPECIES	9	ENSCSAG00000017947	ENSCSAG00000017949	SLC14A2 (ENSCSAG00000017951)	SLC14A1 (ENSCSAG00000017952)	SIGLEC15 (ENSCSAG00000017954)	EPG5 (ENSCSAG00000017960)	PSTPIP2 (ENSCSAG00000017965)	ATP5F1A (ENSCSAG00000017968)	HAUS1 (ENSCSAG00000017970)	C18orf25 (ENSCSAG00000017972)	RNF165 (ENSCSAG00000017974)	LOXHD1 (ENSCSAG00000017984)	ST8SIA5 (ENSCSAG00000017993)	PIAS2 (ENSCSAG00000017995)	ELOA2 (ENSCSAG00000018570)	KATNAL2 (ENSCSAG00000018001) #22	HDHD2 (ENSCSAG00000018007) #24	IER3IP1 (ENSCSAG00000018009) #23	SKOR2 (ENSCSAG00000018012) #25	SMAD2 (ENSCSAG00000018016)	ZBTB7C (ENSCSAG00000018018)	CTIF (ENSCSAG00000018021)	SMAD7 (ENSCSAG00000018024)	ENSCSAG00000018569	DYM (ENSCSAG00000018028)	C18orf32 (ENSCSAG00000018029)	LIPG (ENSCSAG00000018043)	ACAA2 (ENSCSAG00000018054)	MYO5B (ENSCSAG00000018060)	CFAP53 (ENSCSAG00000018065)	MBD1 (ENSCSAG00000018070)
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394	ENSGT01030000234626.D
Macaca	ANCESTRAL SPECIES	22	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00440000033919.b	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.a.a.b.b	ENSGT00940000159394	ENSGT01030000234626.D
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.a.b.b	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.b.a.a	ENSGT00940000155478.r	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Crab-eating macaque	MODERN SPECIES	9	SIGLEC15 (ENSMFAG00000031829)	EPG5 (ENSMFAG00000042030)	PSTPIP2 (ENSMFAG00000037150)	ATP5F1A (ENSMFAG00000001649)	ENSMFAG00000049075	HAUS1 (ENSMFAG00000043557)	ENSMFAG00000052445	C18orf25 (ENSMFAG00000042249)	RNF165 (ENSMFAG00000000616)	LOXHD1 (ENSMFAG00000037181)	ST8SIA5 (ENSMFAG00000035970)	ENSMFAG00000050857	PIAS2 (ENSMFAG00000031982)	ENSMFAG00000031695	ENSMFAG00000031677	KATNAL2 (ENSMFAG00000029779) #22	HDHD2 (ENSMFAG00000012951) #24	IER3IP1 (ENSMFAG00000060309) #23	ENSMFAG00000063952 #25	SMAD2 (ENSMFAG00000045652)	ZBTB7C (ENSMFAG00000031667)	ENSMFAG00000058784	ENSMFAG00000052298	CTIF (ENSMFAG00000037903)	ENSMFAG00000061902	SMAD7 (ENSMFAG00000042998)	ENSMFAG00000064429	ENSMFAG00000065559	DYM (ENSMFAG00000031987)	C18orf32 (ENSMFAG00000030546)	RPL17 (ENSMFAG00000042744)
Rhesus	MODERN SPECIES	9	ENSMMUG00000061645	SLC14A1 (ENSMMUG00000011037)	SIGLEC15 (ENSMMUG00000003561)	EPG5 (ENSMMUG00000003562)	PSTPIP2 (ENSMMUG00000003566)	ATP5F1A (ENSMMUG00000003570)	HAUS1 (ENSMMUG00000003124)	ENSMMUG00000056307	C18H18orf25 (ENSMMUG00000011473)	RNF165 (ENSMMUG00000017243)	LOXHD1 (ENSMMUG00000017246)	ST8SIA5 (ENSMMUG00000002742)	ENSMMUG00000050406	PIAS2 (ENSMMUG00000004498)	ELOA2 (ENSMMUG00000044172)	KATNAL2 (ENSMMUG00000015952) #22	HDHD2 (ENSMMUG00000010999) #24	IER3IP1 (ENSMMUG00000059289) #23	SKOR2 (ENSMMUG00000048459) #25	ENSMMUG00000050569	SMAD2 (ENSMMUG00000007816)	ZBTB7C (ENSMMUG00000015704)	CTIF (ENSMMUG00000020898)	SMAD7 (ENSMMUG00000056276)	DYM (ENSMMUG00000001760)	RPL17 (ENSMMUG00000018837)	ENSMMUG00000064858	ENSMMUG00000038584	LIPG (ENSMMUG00000019054)	ACAA2 (ENSMMUG00000003040)	ENSMMUG00000064909
Pig-tailed macaque	MODERN SPECIES	155															ENSMNEG00000040070	KATNAL2 (ENSMNEG00000029817) #22	ENSMNEG00000038574 #24	IER3IP1 (ENSMNEG00000030543) #23	ENSMNEG00000038031 #25	SMAD2 (ENSMNEG00000037330)	ZBTB7C (ENSMNEG00000031886)	ENSMNEG00000034460	ENSMNEG00000045230	CTIF (ENSMNEG00000039395)	SMAD7 (ENSMNEG00000039694)	DYM (ENSMNEG00000030545)	C18orf32 (ENSMNEG00000037414)	ENSMNEG00000035945	LIPG (ENSMNEG00000043610)	ACAA2 (ENSMNEG00000037789)	MYO5B (ENSMNEG00000033529)
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Olive baboon	MODERN SPECIES	10	SYT4 (ENSPANG00000036999)	ENSPANG00000044709	SETBP1 (ENSPANG00000014223)	SLC14A2 (ENSPANG00000010314)	SLC14A1 (ENSPANG00000010058)	SIGLEC15 (ENSPANG00000013868)	EPG5 (ENSPANG00000009665)	PSTPIP2 (ENSPANG00000019094)	ATP5F1A (ENSPANG00000007341)	HAUS1 (ENSPANG00000029808)	C18orf25 (ENSPANG00000006488)	RNF165 (ENSPANG00000025287)	LOXHD1 (ENSPANG00000025288)	ST8SIA5 (ENSPANG00000024947)	PIAS2 (ENSPANG00000016213)	KATNAL2 (ENSPANG00000017088) #22	ELOA2 (ENSPANG00000049945)	HDHD2 (ENSPANG00000010312) #24	IER3IP1 (ENSPANG00000041314) #23	SKOR2 (ENSPANG00000017535) #25	SMAD2 (ENSPANG00000025520)	ZBTB7C (ENSPANG00000016942)	CTIF (ENSPANG00000017087)	SMAD7 (ENSPANG00000025519)	ENSPANG00000046129	ENSPANG00000037588	C18orf32 (ENSPANG00000040941)	ENSPANG00000031295	LIPG (ENSPANG00000024235)	ACAA2 (ENSPANG00000002878)	MYO5B (ENSPANG00000022089)
Cercopithecinae_d	ANCESTRAL SPECIES	40	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b.a.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT01100000264016	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Drill	MODERN SPECIES	677															ELOA2 (ENSMLEG00000028278)	KATNAL2 (ENSMLEG00000029023) #22	HDHD2 (ENSMLEG00000029998) #24	IER3IP1 (ENSMLEG00000034594) #23
Sooty mangabey	MODERN SPECIES	190	SYT4 (ENSCATG00000032803)	SETBP1 (ENSCATG00000033792)	SLC14A2 (ENSCATG00000032025)	SLC14A1 (ENSCATG00000025983)	SIGLEC15 (ENSCATG00000043629)	EPG5 (ENSCATG00000038496)	PSTPIP2 (ENSCATG00000033892)	ATP5F1A (ENSCATG00000025898)	HAUS1 (ENSCATG00000025348)	C18orf25 (ENSCATG00000039068)	RNF165 (ENSCATG00000037696)	LOXHD1 (ENSCATG00000036618)	ST8SIA5 (ENSCATG00000030338)	PIAS2 (ENSCATG00000034031)	ELOA2 (ENSCATG00000032113)	KATNAL2 (ENSCATG00000037094) #22	HDHD2 (ENSCATG00000035277) #24	IER3IP1 (ENSCATG00000035811) #23	SKOR2 (ENSCATG00000035815) #25	SMAD2 (ENSCATG00000003842)	ZBTB7C (ENSCATG00000044413)	ENSCATG00000005038	ENSCATG00000045052	CTIF (ENSCATG00000038134)	SMAD7 (ENSCATG00000037681)	ENSCATG00000037245	DYM (ENSCATG00000031272)	ENSCATG00000018328	ENSCATG00000037257	ENSCATG00000043658	LIPG (ENSCATG00000033603)
Rhinopithecus	ANCESTRAL SPECIES	314		ENSGT00950000182878.b.b.`b.a.b.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.i	ENSGT00390000006029	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25
Golden snub-nosed monkey	MODERN SPECIES	782															ELOA2 (ENSRROG00000039990)	KATNAL2 (ENSRROG00000021914) #22	HDHD2 (ENSRROG00000043827) #24	IER3IP1 (ENSRROG00000042481) #23	ENSRROG00000033499 #25
Black snub-nosed monkey	MODERN SPECIES	1904		ENSRBIG00000042956	SETBP1 (ENSRBIG00000031542)	SLC14A2 (ENSRBIG00000044802)	SLC14A1 (ENSRBIG00000006426)	SIGLEC15 (ENSRBIG00000032827)	EPG5 (ENSRBIG00000034374)	PSTPIP2 (ENSRBIG00000030324)	ATP5F1A (ENSRBIG00000039573)	HAUS1 (ENSRBIG00000035142)	C18orf25 (ENSRBIG00000030339)	RNF165 (ENSRBIG00000023642)	LOXHD1 (ENSRBIG00000042735)	ST8SIA5 (ENSRBIG00000030321)	PIAS2 (ENSRBIG00000038220)	KATNAL2 (ENSRBIG00000040316) #22	ELOA2 (ENSRBIG00000033712)	ENSRBIG00000006980	ENSRBIG00000034951 #24	IER3IP1 (ENSRBIG00000028883) #23	SKOR2 (ENSRBIG00000043935) #25
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029.a	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Mas night monkey	MODERN SPECIES	426	SLC14A2 (ENSANAG00000024503)	SLC14A1 (ENSANAG00000035909)	SIGLEC15 (ENSANAG00000020739)	EPG5 (ENSANAG00000028542)	PSTPIP2 (ENSANAG00000033626)	ENSANAG00000026020	ENSANAG00000036960	ATP5F1A (ENSANAG00000020684)	ENSANAG00000034812	C18orf25 (ENSANAG00000015359)	RNF165 (ENSANAG00000032671)	LOXHD1 (ENSANAG00000026289)	ST8SIA5 (ENSANAG00000020554)	PIAS2 (ENSANAG00000036127)	ENSANAG00000027601	KATNAL2 (ENSANAG00000030359) #22	HDHD2 (ENSANAG00000036024) #24	ENSANAG00000023759	IER3IP1 (ENSANAG00000023921) #23	SKOR2 (ENSANAG00000030804) #25	ENSANAG00000030706	SMAD2 (ENSANAG00000031458)	ZBTB7C (ENSANAG00000033116)	CTIF (ENSANAG00000024925)	SMAD7 (ENSANAG00000028079)	DYM (ENSANAG00000029190)	ENSANAG00000032933	ENSANAG00000038237	LIPG (ENSANAG00000020805)	ACAA2 (ENSANAG00000033683)	MYO5B (ENSANAG00000027712)
Cebidae	ANCESTRAL SPECIES	28	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029.a	ENSGT00390000016167.g	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.`b.a	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741.ab	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029.a	ENSGT00390000016167.g	ENSGT00940000154677.g.a.d	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.`b.a	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741.ab	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Capuchin	MODERN SPECIES	60	SLC14A2 (ENSCCAG00000022464)	SLC14A1 (ENSCCAG00000020737)	SIGLEC15 (ENSCCAG00000029871)	EPG5 (ENSCCAG00000019864)	ENSCCAG00000033907	PSTPIP2 (ENSCCAG00000026201)	ATP5F1A (ENSCCAG00000035404)	HAUS1 (ENSCCAG00000026991)	C18orf25 (ENSCCAG00000013731)	ENSCCAG00000028369	RNF165 (ENSCCAG00000015794)	LOXHD1 (ENSCCAG00000024237)	ST8SIA5 (ENSCCAG00000023326)	PIAS2 (ENSCCAG00000022843)	ENSCCAG00000033839	KATNAL2 (ENSCCAG00000027056) #22	HDHD2 (ENSCCAG00000022419) #24	IER3IP1 (ENSCCAG00000036067) #23	SKOR2 (ENSCCAG00000021025) #25	ENSCCAG00000037809	SMAD2 (ENSCCAG00000036243)	ZBTB7C (ENSCCAG00000034868)	CTIF (ENSCCAG00000022758)	SMAD7 (ENSCCAG00000033513)	ENSCCAG00000037376	DYM (ENSCCAG00000032314)	ENSCCAG00000023815	RPL17 (ENSCCAG00000024026)	LIPG (ENSCCAG00000023643)	ENSCCAG00000001466	ACAA2 (ENSCCAG00000026857)
Bolivian squirrel monkey	MODERN SPECIES	58															ENSSBOG00000029772	KATNAL2 (ENSSBOG00000024912) #22	HDHD2 (ENSSBOG00000023121) #24	IER3IP1 (ENSSBOG00000028824) #23	ENSSBOG00000019888 #25	ENSSBOG00000019181	SMAD2 (ENSSBOG00000036148)	ZBTB7C (ENSSBOG00000027938)	CTIF (ENSSBOG00000028468)	SMAD7 (ENSSBOG00000028839)	DYM (ENSSBOG00000031374)	C18orf32 (ENSSBOG00000027273)	ENSSBOG00000026485	LIPG (ENSSBOG00000017170)	ENSSBOG00000034832	ACAA2 (ENSSBOG00000029056)	MYO5B (ENSSBOG00000024887)
Marmoset	MODERN SPECIES	4	ENSCJAG00000082171	SETBP1 (ENSCJAG00000004035)	SLC14A2 (ENSCJAG00000004051)	ENSCJAG00000048632	EPG5 (ENSCJAG00000008484)	SIGLEC15 (ENSCJAG00000008603)	ENSCJAG00000008319	HAUS1 (ENSCJAG00000008303)	ENSCJAG00000079309	C18orf25 (ENSCJAG00000008285)	ENSCJAG00000075854	RNF165 (ENSCJAG00000073766)	LOXHD1 (ENSCJAG00000008221)	ST8SIA5 (ENSCJAG00000081047)	PIAS2 (ENSCJAG00000008199)	KATNAL2 (ENSCJAG00000008107) #22	ENSCJAG00000060346	HDHD2 (ENSCJAG00000004578) #24	IER3IP1 (ENSCJAG00000072341) #23	SKOR2 (ENSCJAG00000048253) #25	ENSCJAG00000071063	SMAD2 (ENSCJAG00000004630)	ENSCJAG00000081448	ZBTB7C (ENSCJAG00000004704)	CTIF (ENSCJAG00000004729)	SMAD7 (ENSCJAG00000039611)	ENSCJAG00000067581	ENSCJAG00000060917	DYM (ENSCJAG00000004754)	ENSCJAG00000076436	ENSCJAG00000004779
Tarsier	MODERN SPECIES	2204																KATNAL2 (ENSTSYG00000013358) #22	HDHD2 (ENSTSYG00000013360) #24	IER3IP1 (ENSTSYG00000031013) #23	ENSTSYG00000007405 #25
Laurasiatheria	ANCESTRAL SPECIES	23	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Suina	ANCESTRAL SPECIES	12			ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Pig	MODERN SPECIES		ENSSSCG00000008882	SETBP1 (ENSSSCG00000004490)	ENSSSCG00000045948	ENSSSCG00000004491	SLC14A1 (ENSSSCG00000004492)	SIGLEC15 (ENSSSCG00000004493)	EPG5 (ENSSSCG00000021072)	PSTPIP2 (ENSSSCG00000060601)	ATP5F1A (ENSSSCG00000004499)	HAUS1 (ENSSSCG00000004498)	C18orf25 (ENSSSCG00000004500)	RNF165 (ENSSSCG00000004502)	LOXHD1 (ENSSSCG00000004503)	ST8SIA5 (ENSSSCG00000032053)	PIAS2 (ENSSSCG00000034730)	KATNAL2 (ENSSSCG00000022643) #22	HDHD2 (ENSSSCG00000005771) #24	IER3IP1 (ENSSSCG00000060420) #23	ENSSSCG00000039669	SKOR2 (ENSSSCG00000005767) #25	SMAD2 (ENSSSCG00000004505)	ZBTB7C (ENSSSCG00000028076)	CTIF (ENSSSCG00000004506)	SMAD7 (ENSSSCG00000004507)	DYM (ENSSSCG00000004508)	C18orf32 (ENSSSCG00000034415)	ENSSSCG00000035007	LIPG (ENSSSCG00000004509)	ACAA2 (ENSSSCG00000004510)	MYO5B (ENSSSCG00000004511)	ENSSSCG00000049462
Chacoan peccary	MODERN SPECIES	124														ENSCWAG00000009195	PIAS2 (ENSCWAG00000009072)	KATNAL2 (ENSCWAG00000008820) #22	HDHD2 (ENSCWAG00000008775) #24	IER3IP1 (ENSCWAG00000008743) #23	SKOR2 (ENSCWAG00000008664) #25
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00940000156943	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Cetacea	ANCESTRAL SPECIES	11	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Odontoceti	ANCESTRAL SPECIES	10	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.k	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.k	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.k	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Monodontidae	ANCESTRAL SPECIES	8	ENSGT00950000183064.b.d	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT01000000220806	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00390000008808.k.a.a	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.k	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394	ENSGT00940000169764	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Narwhal	MODERN SPECIES	295	ENSMMNG00015003095	SETBP1 (ENSMMNG00015003067)	SLC14A2 (ENSMMNG00015002988)	SLC14A1 (ENSMMNG00015002937)	SIGLEC15 (ENSMMNG00015002905)	EPG5 (ENSMMNG00015002843)	PSTPIP2 (ENSMMNG00015002786)	ATP5F1A (ENSMMNG00015002755)	HAUS1 (ENSMMNG00015002726)	C18orf25 (ENSMMNG00015002704)	RNF165 (ENSMMNG00015002686)	LOXHD1 (ENSMMNG00015002006)	ST8SIA5 (ENSMMNG00015001685)	PIAS2 (ENSMMNG00015001607)	ENSMMNG00015001565	KATNAL2 (ENSMMNG00015001513) #22	HDHD2 (ENSMMNG00015001468) #24	ENSMMNG00015001451 #23	SKOR2 (ENSMMNG00015001428) #25	SMAD2 (ENSMMNG00015001331)	ZBTB7C (ENSMMNG00015001274)	CTIF (ENSMMNG00015001193)	ENSMMNG00015001156	SMAD7 (ENSMMNG00015001136)	ENSMMNG00015001110	DYM (ENSMMNG00015001014)	ENSMMNG00015000947	ENSMMNG00015000862	LIPG (ENSMMNG00015000826)	ENSMMNG00015000802	ACAA2 (ENSMMNG00015000776)
Beluga whale	MODERN SPECIES	85	ENSDLEG00000018895	SETBP1 (ENSDLEG00000018888)	SLC14A2 (ENSDLEG00000018851)	SLC14A1 (ENSDLEG00000018837)	SIGLEC15 (ENSDLEG00000018831)	EPG5 (ENSDLEG00000018365)	PSTPIP2 (ENSDLEG00000018281)	ATP5A1 (ENSDLEG00000018272)	HAUS1 (ENSDLEG00000018258)	CUNH18orf25 (ENSDLEG00000018251)	RNF165 (ENSDLEG00000018238)	LOXHD1 (ENSDLEG00000018163)	ST8SIA5 (ENSDLEG00000018143)	PIAS2 (ENSDLEG00000018124)	ENSDLEG00000018112	KATNAL2 (ENSDLEG00000017942) #22	HDHD2 (ENSDLEG00000017914) #24	ENSDLEG00000017903	SKOR2 (ENSDLEG00000017834) #25
Vaquita	MODERN SPECIES	5	ENSPSNG00000015482	SETBP1 (ENSPSNG00000015348)	SLC14A2 (ENSPSNG00000015077)	SLC14A1 (ENSPSNG00000014661)	SIGLEC15 (ENSPSNG00000014516)	EPG5 (ENSPSNG00000014417)	PSTPIP2 (ENSPSNG00000014312)	ATP5F1A (ENSPSNG00000014199)	HAUS1 (ENSPSNG00000014089)	C18orf25 (ENSPSNG00000013977)	RNF165 (ENSPSNG00000013772)	LOXHD1 (ENSPSNG00000011419)	ST8SIA5 (ENSPSNG00000010902)	PIAS2 (ENSPSNG00000010743)	ENSPSNG00000010683	KATNAL2 (ENSPSNG00000010440) #22	HDHD2 (ENSPSNG00000010382) #24	IER3IP1 (ENSPSNG00000010315) #23	SKOR2 (ENSPSNG00000010229) #25	SMAD2 (ENSPSNG00000009901)	ZBTB7C (ENSPSNG00000009825)	CTIF (ENSPSNG00000009732)	ENSPSNG00000009707	ENSPSNG00000009632	DYM (ENSPSNG00000009515)	ENSPSNG00000009445	ENSPSNG00000009327	LIPG (ENSPSNG00000009216)	ACAA2 (ENSPSNG00000009112)	ENSPSNG00000009066	MYO5B (ENSPSNG00000008965)
Dolphin	MODERN SPECIES	1680															ENSTTRG00000001016	KATNAL2 (ENSTTRG00000001017) #22	HDHD2 (ENSTTRG00000001018) #24	IER3IP1 (ENSTTRG00000001019) #23
Sperm whale	MODERN SPECIES	10	SETBP1 (ENSPCTG00005007777)	SLC14A2 (ENSPCTG00005007803)	SLC14A1 (ENSPCTG00005007875)	SIGLEC15 (ENSPCTG00005008000)	EPG5 (ENSPCTG00005008044)	PSTPIP2 (ENSPCTG00005008088)	ATP5F1A (ENSPCTG00005008127)	HAUS1 (ENSPCTG00005008172)	C19H18orf25 (ENSPCTG00005008306)	RNF165 (ENSPCTG00005008364)	ENSPCTG00005008447	ST8SIA5 (ENSPCTG00005008579)	ENSPCTG00005008636	PIAS2 (ENSPCTG00005008808)	ENSPCTG00005008984	KATNAL2 (ENSPCTG00005009038) #22	HDHD2 (ENSPCTG00005009305) #24	IER3IP1 (ENSPCTG00005009339) #23	SKOR2 (ENSPCTG00005009374) #25	SMAD2 (ENSPCTG00005009494)	ZBTB7C (ENSPCTG00005009728)	CTIF (ENSPCTG00005009802)	DYM (ENSPCTG00005009929)	ENSPCTG00005010201	ENSPCTG00005010250	LIPG (ENSPCTG00005010413)	ACAA2 (ENSPCTG00005010500)	ENSPCTG00005010644	ENSPCTG00005010783	CFAP53 (ENSPCTG00005012030)	MBD1 (ENSPCTG00005012098)
Blue whale	MODERN SPECIES	5	SETBP1 (ENSBMSG00010020281)	SLC14A2 (ENSBMSG00010020311)	SLC14A1 (ENSBMSG00010020365)	SIGLEC15 (ENSBMSG00010020448)	EPG5 (ENSBMSG00010020473)	PSTPIP2 (ENSBMSG00010020499)	ENSBMSG00010020513	ATP5F1A (ENSBMSG00010020528)	HAUS1 (ENSBMSG00010020557)	C18orf25 (ENSBMSG00010020596)	RNF165 (ENSBMSG00010020628)	LOXHD1 (ENSBMSG00010020792)	ST8SIA5 (ENSBMSG00010021215)	PIAS2 (ENSBMSG00010021288)	ENSBMSG00010021325	KATNAL2 (ENSBMSG00010021337) #22	ENSBMSG00010021354	HDHD2 (ENSBMSG00010021363) #24	IER3IP1 (ENSBMSG00010021374) #23	ENSBMSG00010021377	SKOR2 (ENSBMSG00010021387) #25	SMAD2 (ENSBMSG00010021413)	ZBTB7C (ENSBMSG00010021442)	CTIF (ENSBMSG00010021461)	SMAD7 (ENSBMSG00010021494)	DYM (ENSBMSG00010021517)	C18orf32 (ENSBMSG00010021530)	ENSBMSG00010021535	LIPG (ENSBMSG00010021562)	ACAA2 (ENSBMSG00010021576)	MYO5B (ENSBMSG00010009537)
Pecora	ANCESTRAL SPECIES	26	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Yarkand deer	MODERN SPECIES	19	SETBP1 (ENSCHYG00000015524)	SLC14A2 (ENSCHYG00000015148)	SLC14A1 (ENSCHYG00000014960)	SIGLEC15 (ENSCHYG00000014853)	EPG5 (ENSCHYG00000014653)	ENSCHYG00000014621	PSTPIP2 (ENSCHYG00000014255)	ATP5F1A (ENSCHYG00000014052)	HAUS1 (ENSCHYG00000013860)	ENSCHYG00000013803	ENSCHYG00000013406	LOXHD1 (ENSCHYG00000011324)	ST8SIA5 (ENSCHYG00000011028)	ENSCHYG00000010966	PIAS2 (ENSCHYG00000010761)	KATNAL2 (ENSCHYG00000010401) #22	HDHD2 (ENSCHYG00000010250) #24	ENSCHYG00000010350 #23	ENSCHYG00000010193 #25	SMAD2 (ENSCHYG00000010054)	ENSCHYG00000010021	ZBTB7C (ENSCHYG00000009960)	ENSCHYG00000026884	CTIF (ENSCHYG00000026870)	SMAD7 (ENSCHYG00000026860)	DYM (ENSCHYG00000026793)	C18orf32 (ENSCHYG00000026758)	ENSCHYG00000026734	LIPG (ENSCHYG00000026718)	ACAA2 (ENSCHYG00000026661)	MYO5B (ENSCHYG00000026574)
Percora_a	ANCESTRAL SPECIES	28	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.ab	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Bovidae	ANCESTRAL SPECIES	28	ENSGT01030000234510.a.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788	ENSGT00550000074846.ab	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Caprinae	ANCESTRAL SPECIES	25	ENSGT01030000234510.a.a.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788	ENSGT00550000074846.ab.a	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.m	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Rambouillet Sheep	MODERN SPECIES	15	ENSOARG00020024696	SETBP1 (ENSOARG00020024713)	SLC14A2 (ENSOARG00020024734)	SLC14A1 (ENSOARG00020024788)	SIGLEC15 (ENSOARG00020024818)	EPG5 (ENSOARG00020024844)	ENSOARG00020024920	PSTPIP2 (ENSOARG00020024936)	ATP5F1A (ENSOARG00020025008)	HAUS1 (ENSOARG00020025030)	C18orf25 (ENSOARG00020025062)	RNF165 (ENSOARG00020006346)	LOXHD1 (ENSOARG00020006581)	ST8SIA5 (ENSOARG00020009312)	PIAS2 (ENSOARG00020009642)	KATNAL2 (ENSOARG00020009912) #22	ENSOARG00020010055	HDHD2 (ENSOARG00020010165) #24	IER3IP1 (ENSOARG00020010237) #23	SKOR2 (ENSOARG00020010308) #25	SMAD2 (ENSOARG00020010458)	ZBTB7C (ENSOARG00020010706)	CTIF (ENSOARG00020010822)	SMAD7 (ENSOARG00020010974)	DYM (ENSOARG00020011069)	ENSOARG00020011257	C18orf32 (ENSOARG00020011289)	RPL17 (ENSOARG00020011339)	LIPG (ENSOARG00020011622)	ACAA2 (ENSOARG00020011796)	MYO5B (ENSOARG00020012171)
Goat	MODERN SPECIES	16	MC5R (ENSCHIG00000019609)	MC2R (ENSCHIG00000006175)	SETBP1 (ENSCHIG00000014366)	SLC14A2 (ENSCHIG00000023270)	SLC14A1 (ENSCHIG00000006085)	SIGLEC15 (ENSCHIG00000008764)	EPG5 (ENSCHIG00000003358)	PSTPIP2 (ENSCHIG00000019291)	ENSCHIG00000014708	HAUS1 (ENSCHIG00000027208)	C18orf25 (ENSCHIG00000014294)	RNF165 (ENSCHIG00000009622)	LOXHD1 (ENSCHIG00000019780)	ST8SIA5 (ENSCHIG00000021775)	ENSCHIG00000014561	KATNAL2 (ENSCHIG00000021217) #22	HDHD2 (ENSCHIG00000015973) #24	IER3IP1 (ENSCHIG00000020552) #23	SKOR2 (ENSCHIG00000011642) #25	SMAD2 (ENSCHIG00000020206)	ZBTB7C (ENSCHIG00000001635)	CTIF (ENSCHIG00000014455)	SMAD7 (ENSCHIG00000019461)	DYM (ENSCHIG00000001838)	ENSCHIG00000004940	C18orf32 (ENSCHIG00000021354)	ENSCHIG00000011677	LIPG (ENSCHIG00000015994)	ENSCHIG00000003894	ACAA2 (ENSCHIG00000024466)	MYO5B (ENSCHIG00000016585)
Bovinae	ANCESTRAL SPECIES	28	ENSGT01030000235502	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788	ENSGT00550000074846.ab	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.i.b	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Bos	ANCESTRAL SPECIES	29	ENSGT00390000010047.b.kb	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788	ENSGT00550000074846.ab	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.i.b	ENSGT00950000183010.a.b.a.b.a	ENSGT00390000018741.j	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Bos_b	ANCESTRAL SPECIES	34	ENSGT01030000235502	ENSGT00390000010047.b.kb	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.ab	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.i.b	ENSGT00950000183010.a.b.a.b.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT00950000183005.a.a	ENSGT00730000111044
Cow	MODERN SPECIES	16	SETBP1 (ENSBTAG00000018088)	SLC14A2 (ENSBTAG00000002099)	SLC14A1 (ENSBTAG00000019870)	SIGLEC15 (ENSBTAG00000016620)	EPG5 (ENSBTAG00000012067)	PSTPIP2 (ENSBTAG00000002624)	ATP5F1A (ENSBTAG00000002507)	HAUS1 (ENSBTAG00000002512)	C24H18orf25 (ENSBTAG00000032964)	RNF165 (ENSBTAG00000001128)	ENSBTAG00000048422	LOXHD1 (ENSBTAG00000015210)	ST8SIA5 (ENSBTAG00000001770)	PIAS2 (ENSBTAG00000007833)	ENSBTAG00000047547	KATNAL2 (ENSBTAG00000019331) #22	HDHD2 (ENSBTAG00000011893) #24	IER3IP1 (ENSBTAG00000032961) #23	SKOR2 (ENSBTAG00000032962) #25	SMAD2 (ENSBTAG00000039916)	ZBTB7C (ENSBTAG00000013306)	CTIF (ENSBTAG00000018901)	SMAD7 (ENSBTAG00000012441)	DYM (ENSBTAG00000000024)	C24H18orf32 (ENSBTAG00000021334)	RPL17 (ENSBTAG00000022902)	LIPG (ENSBTAG00000048916)	ACAA2 (ENSBTAG00000002863)	MYO5B (ENSBTAG00000019455)	MBD1 (ENSBTAG00000003801)	CXXC1 (ENSBTAG00000021884)
Hybrid Bos Indicus	MODERN SPECIES	16	SETBP1 (ENSBIXG00005029205)	SLC14A2 (ENSBIXG00005029181)	SLC14A1 (ENSBIXG00005001781)	SIGLEC15 (ENSBIXG00005029135)	EPG5 (ENSBIXG00005005178)	PSTPIP2 (ENSBIXG00005029098)	ATP5F1A (ENSBIXG00005002010)	ENSBIXG00005005126	C18orf25 (ENSBIXG00005002109)	RNF165 (ENSBIXG00005002180)	ENSBIXG00005005062	LOXHD1 (ENSBIXG00005028849)	ST8SIA5 (ENSBIXG00005028065)	PIAS2 (ENSBIXG00005027955)	ENSBIXG00005006537	KATNAL2 (ENSBIXG00005004778) #22	HDHD2 (ENSBIXG00005027742) #24	ENSBIXG00005027700	IER3IP1 (ENSBIXG00005027693) #23	SKOR2 (ENSBIXG00005004756) #25	SMAD2 (ENSBIXG00005027591)	ZBTB7C (ENSBIXG00005027504)	CTIF (ENSBIXG00005007777)	SMAD7 (ENSBIXG00005004711)	DYM (ENSBIXG00005027220)	ENSBIXG00005027155	ENSBIXG00005007771	LIPG (ENSBIXG00005004622)	ACAA2 (ENSBIXG00005026872)	MYO5B (ENSBIXG00005026770)	ENSBIXG00005026615
Bos_a	ANCESTRAL SPECIES	28	ENSGT00390000010047.b.kb	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00950000183198.c.b.a.u	ENSGT00940000158788	ENSGT00550000074846.ab	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.j	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT00950000183005.a.a	ENSGT00730000111044
Domestic yak	MODERN SPECIES	13	ENSBGRG00000017233	SETBP1 (ENSBGRG00000017294)	SLC14A2 (ENSBGRG00000017535)	SLC14A1 (ENSBGRG00000017647)	SIGLEC15 (ENSBGRG00000018017)	EPG5 (ENSBGRG00000018124)	PSTPIP2 (ENSBGRG00000018564)	ATP5F1A (ENSBGRG00000018791)	HAUS1 (ENSBGRG00000019042)	C18orf25 (ENSBGRG00000019304)	RNF165 (ENSBGRG00000019400)	LOXHD1 (ENSBGRG00000019547)	ST8SIA5 (ENSBGRG00000021274)	PIAS2 (ENSBGRG00000021507)	ENSBGRG00000021911	KATNAL2 (ENSBGRG00000021942) #22	HDHD2 (ENSBGRG00000022037) #24	IER3IP1 (ENSBGRG00000022154) #23	ENSBGRG00000022203 #25	SMAD2 (ENSBGRG00000022238)	ZBTB7C (ENSBGRG00000022372)	CTIF (ENSBGRG00000022473)	ENSBGRG00000022591	SMAD7 (ENSBGRG00000022643)	DYM (ENSBGRG00000022704)	ENSBGRG00000022927	ENSBGRG00000022965	LIPG (ENSBGRG00000023098)	ACAA2 (ENSBGRG00000023212)	ENSBGRG00000023371	ENSBGRG00000023396
Wild yak	MODERN SPECIES	2191														ST8SIA5 (ENSBMUG00000012907)	PIAS2 (ENSBMUG00000012834)	KATNAL2 (ENSBMUG00000012760) #22	HDHD2 (ENSBMUG00000012729) #24	IER3IP1 (ENSBMUG00000012714) #23	ENSBMUG00000012703 #25
American bison	MODERN SPECIES	3076															PIAS2 (ENSBBBG00000010545)	KATNAL2 (ENSBBBG00000010508) #22	HDHD2 (ENSBBBG00000010488) #24	IER3IP1 (ENSBBBG00000010485) #23	SKOR2 (ENSBBBG00000010476) #25	SMAD2 (ENSBBBG00000010465)	ZBTB7C (ENSBBBG00000010443)	ENSBBBG00000010424	CTIF (ENSBBBG00000010421)	SMAD7 (ENSBBBG00000010410)	DYM (ENSBBBG00000010404)
Siberian musk deer	MODERN SPECIES	132	SETBP1 (ENSMMSG00000011794)	SLC14A2 (ENSMMSG00000011706)	SLC14A1 (ENSMMSG00000011666)	SIGLEC15 (ENSMMSG00000011634)	EPG5 (ENSMMSG00000011583)	PSTPIP2 (ENSMMSG00000011495)	ENSMMSG00000011466	ATP5F1A (ENSMMSG00000011430)	HAUS1 (ENSMMSG00000011347)	C18orf25 (ENSMMSG00000011290)	RNF165 (ENSMMSG00000011227)	LOXHD1 (ENSMMSG00000007604)	ST8SIA5 (ENSMMSG00000007341)	PIAS2 (ENSMMSG00000007137)	ENSMMSG00000007106	KATNAL2 (ENSMMSG00000006988) #22	HDHD2 (ENSMMSG00000006946) #24	IER3IP1 (ENSMMSG00000006915) #23	SKOR2 (ENSMMSG00000006829) #25	ENSMMSG00000006765	ZBTB7C (ENSMMSG00000006737)	CTIF (ENSMMSG00000006694)	SMAD7 (ENSMMSG00000006627)	DYM (ENSMMSG00000006548)	C18orf32 (ENSMMSG00000006526)	ENSMMSG00000006453	LIPG (ENSMMSG00000006397)	ACAA2 (ENSMMSG00000006348)	ENSMMSG00000006303	MYO5B (ENSMMSG00000006238)	CFAP53 (ENSMMSG00000006206)
Camelidae	ANCESTRAL SPECIES	53			ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234539.a.a.b.b	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a	ENSGT00730000111044
Arabian camel	MODERN SPECIES	23	SETBP1 (ENSCDRG00005016013)	ENSCDRG00005015929	ENSCDRG00005015812	SLC14A1 (ENSCDRG00005015615)	SIGLEC15 (ENSCDRG00005015557)	EPG5 (ENSCDRG00005015455)	PSTPIP2 (ENSCDRG00005015365)	ATP5F1A (ENSCDRG00005015287)	HAUS1 (ENSCDRG00005015141)	C18orf25 (ENSCDRG00005015062)	ENSCDRG00005015011	ENSCDRG00005014972	LOXHD1 (ENSCDRG00005013391)	PIAS2 (ENSCDRG00005013189)	ENSCDRG00005013155	KATNAL2 (ENSCDRG00005012992) #22	HDHD2 (ENSCDRG00005012918) #24	IER3IP1 (ENSCDRG00005012846) #23	SMAD2 (ENSCDRG00005012465)	ZBTB7C (ENSCDRG00005012395)	CTIF (ENSCDRG00005012119)	ENSCDRG00005012050	ENSCDRG00005012031	DYM (ENSCDRG00005011719)	C18orf32 (ENSCDRG00005011639)	RPL17 (ENSCDRG00005011453)	LIPG (ENSCDRG00005010970)	ENSCDRG00005010930	ACAA2 (ENSCDRG00005010799)	MYO5B (ENSCDRG00005010461)	CFAP53 (ENSCDRG00005010332)
Alpaca	MODERN SPECIES	1747																KATNAL2 (ENSVPAG00000006199) #22	HDHD2 (ENSVPAG00000006202) #24	ENSVPAG00000006203
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Carnivora	ANCESTRAL SPECIES	13	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Caniformia	ANCESTRAL SPECIES	9	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Ursidae	ANCESTRAL SPECIES	23	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT00940000167582	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Ursus	ANCESTRAL SPECIES	25	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.d	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a	ENSGT00730000111044
Polar bear	MODERN SPECIES	96	PIK3C3 (ENSUMAG00000002253)	RIT2 (ENSUMAG00000002274)	SYT4 (ENSUMAG00000002280)	SETBP1 (ENSUMAG00000002294)	ENSUMAG00000002312	SLC14A1 (ENSUMAG00000002359)	EPG5 (ENSUMAG00000002362)	PSTPIP2 (ENSUMAG00000002367)	ATP5F1A (ENSUMAG00000002375)	HAUS1 (ENSUMAG00000002378)	C18orf25 (ENSUMAG00000002382)	RNF165 (ENSUMAG00000002386)	LOXHD1 (ENSUMAG00000002413)	ST8SIA5 (ENSUMAG00000002618)	PIAS2 (ENSUMAG00000002661)	KATNAL2 (ENSUMAG00000002674) #22	HDHD2 (ENSUMAG00000002716) #24	IER3IP1 (ENSUMAG00000002717) #23	SMAD2 (ENSUMAG00000002720)	ZBTB7C (ENSUMAG00000002721)	CTIF (ENSUMAG00000002735)	ENSUMAG00000002746	DYM (ENSUMAG00000002750)	C18orf32 (ENSUMAG00000002755)	ENSUMAG00000002766	LIPG (ENSUMAG00000002779)	ACAA2 (ENSUMAG00000002792)	MYO5B (ENSUMAG00000002812)	MBD1 (ENSUMAG00000002947)	CXXC1 (ENSUMAG00000003014)	SKA1 (ENSUMAG00000003034)
American black bear	MODERN SPECIES	2361																KATNAL2 (ENSUAMG00000008519) #22
Giant Panda	MODERN SPECIES	5	RIT2 (ENSAMEG00000024343)	SYT4 (ENSAMEG00000006769)	SETBP1 (ENSAMEG00000029118)	ENSAMEG00000005289	SLC14A1 (ENSAMEG00000012521)	ENSAMEG00000027408	EPG5 (ENSAMEG00000012534)	PSTPIP2 (ENSAMEG00000012579)	ATP5F1A (ENSAMEG00000012614)	HAUS1 (ENSAMEG00000012644)	ENSAMEG00000025621	C18orf25 (ENSAMEG00000012662)	RNF165 (ENSAMEG00000012667)	LOXHD1 (ENSAMEG00000012676)	PIAS2 (ENSAMEG00000012748)	KATNAL2 (ENSAMEG00000012794) #22	HDHD2 (ENSAMEG00000012799) #24	IER3IP1 (ENSAMEG00000023574) #23	ENSAMEG00000012815 #25	SMAD2 (ENSAMEG00000012816)	ZBTB7C (ENSAMEG00000012857)	CTIF (ENSAMEG00000029852)	SMAD7 (ENSAMEG00000031009)	DYM (ENSAMEG00000006724)	ENSAMEG00000027976	RPL17 (ENSAMEG00000009498)	LIPG (ENSAMEG00000009434)	ACAA2 (ENSAMEG00000009411)	MYO5B (ENSAMEG00000009253)	MBD1 (ENSAMEG00000000238)	CXXC1 (ENSAMEG00000000259)
Mustelinae	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Ferret	MODERN SPECIES	195	RIT2 (ENSMPUG00000001015)	SYT4 (ENSMPUG00000001012)	SETBP1 (ENSMPUG00000001006)	ENSMPUG00000001002	SLC14A1 (ENSMPUG00000000989)	SIGLEC15 (ENSMPUG00000000985)	EPG5 (ENSMPUG00000000970)	PSTPIP2 (ENSMPUG00000000965)	ENSMPUG00000000923	HAUS1 (ENSMPUG00000000919)	C18orf25 (ENSMPUG00000000916)	RNF165 (ENSMPUG00000000899)	LOXHD1 (ENSMPUG00000000881)	ST8SIA5 (ENSMPUG00000000867)	PIAS2 (ENSMPUG00000000861)	KATNAL2 (ENSMPUG00000000857) #22	HDHD2 (ENSMPUG00000000855) #24	ENSMPUG00000000851 #25	SMAD2 (ENSMPUG00000000850)	ZBTB7C (ENSMPUG00000000848)	CTIF (ENSMPUG00000000844)	SMAD7 (ENSMPUG00000000842)	DYM (ENSMPUG00000000838)	ENSMPUG00000000819	ENSMPUG00000000801	LIPG (ENSMPUG00000000750)	ACAA2 (ENSMPUG00000000749)	MYO5B (ENSMPUG00000000748)
American mink	MODERN SPECIES	1	SYT4 (ENSNVIG00000021264)	ENSNVIG00000021282	SETBP1 (ENSNVIG00000000055)	ENSNVIG00000000164	UT1 (ENSNVIG00000000284)	SIGLEC15 (ENSNVIG00000000415)	EPG5 (ENSNVIG00000000422)	PSTPIP2 (ENSNVIG00000000692)	ATP5F1A (ENSNVIG00000000707)	HAUS1 (ENSNVIG00000000735)	CR025 (ENSNVIG00000000751)	RNF165 (ENSNVIG00000000779)	LOXHD1 (ENSNVIG00000000795)	B7Z1K9 (ENSNVIG00000001042)	PIAS2 (ENSNVIG00000001141)	KATNAL2 (ENSNVIG00000001211) #22	HDHD2 (ENSNVIG00000001251) #24	IER3IP1 (ENSNVIG00000001270) #23	SKOR2 (ENSNVIG00000001287) #25	SMAD2 (ENSNVIG00000001323)	ZBTB7C (ENSNVIG00000001419)	CTIF (ENSNVIG00000001442)	SMAD7 (ENSNVIG00000001490)	DYM (ENSNVIG00000001500)	CR032 (ENSNVIG00000001568)	RPL17 (ENSNVIG00000001575)	LIPG (ENSNVIG00000001676)	ACAA2 (ENSNVIG00000001712)	MYO5B (ENSNVIG00000001798)	CFAP53 (ENSNVIG00000001864)	ENSNVIG00000001883
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000159026	ENSGT00390000016908.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b.a	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000161606	ENSGT00940000162189	ENSGT00910000144329	ENSGT00940000161896.a.a	ENSGT00940000161986	ENSGT00940000161276.C	ENSGT00940000161959	ENSGT00940000163114	ENSGT00390000000920	ENSGT00940000161706	ENSGT00940000161854
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00390000016908.b	ENSGT00950000182901.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.bb.b.a	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000161606	ENSGT00940000162189	ENSGT00910000144329	ENSGT00940000161896.a.a	ENSGT00940000161986	ENSGT00940000161276.C	ENSGT00940000161959	ENSGT00940000163114	ENSGT00390000000920	ENSGT00940000161706	ENSGT00940000161854
Dog	MODERN SPECIES	35	ENSCAFG00845003617	SETBP1 (ENSCAFG00845003603)	ENSCAFG00845003594	ENSCAFG00845003569	SLC14A1 (ENSCAFG00845003486)	SIGLEC15 (ENSCAFG00845003447)	EPG5 (ENSCAFG00845003404)	PSTPIP2 (ENSCAFG00845003305)	ATP5F1A (ENSCAFG00845003277)	HAUS1 (ENSCAFG00845003245)	C7H18orf25 (ENSCAFG00845003164)	C7H18orf25 (ENSCAFG00845003098)	ENSCAFG00845002851	ST8SIA5 (ENSCAFG00845002742)	PIAS2 (ENSCAFG00845002646)	KATNAL2 (ENSCAFG00845002494) #22	HDHD2 (ENSCAFG00845002479) #24	IER3IP1 (ENSCAFG00845002460) #23	SKOR2 (ENSCAFG00845002418) #25	SMAD2 (ENSCAFG00845002338)	S100A9 (ENSCAFG00845002276)	S100A8 (ENSCAFG00845002254)	S100A8 (ENSCAFG00845002217)	S100A5 (ENSCAFG00845002122)	S100A4 (ENSCAFG00845002094)	S100A2 (ENSCAFG00845002036)	S100A16 (ENSCAFG00845002007)	S100A14 (ENSCAFG00845001986)	S100A13 (ENSCAFG00845001940)	S100A1 (ENSCAFG00845001897)	CHTOP (ENSCAFG00845001816)
Dingo	MODERN SPECIES	271	SYT4 (ENSCAFG00020011042)	ENSCAFG00020011019	SETBP1 (ENSCAFG00020010948)	ENSCAFG00020010873	SLC14A1 (ENSCAFG00020010836)	SIGLEC15 (ENSCAFG00020010814)	EPG5 (ENSCAFG00020010774)	PSTPIP2 (ENSCAFG00020010751)	ENSCAFG00020010725	HAUS1 (ENSCAFG00020010719)	C18orf25 (ENSCAFG00020010717)	RNF165 (ENSCAFG00020010709)	LOXHD1 (ENSCAFG00020010557)	ST8SIA5 (ENSCAFG00020010505)	PIAS2 (ENSCAFG00020010501)	KATNAL2 (ENSCAFG00020010403) #22	HDHD2 (ENSCAFG00020010391) #24	ENSCAFG00020010389 #23	SKOR2 (ENSCAFG00020010387) #25	ENSCAFG00020010376	ENSCAFG00020010374	ENSCAFG00020010368	S100A12 (ENSCAFG00020010365)	S100A8 (ENSCAFG00020010359)	ENSCAFG00020010358	S100A5 (ENSCAFG00020010354)	ENSCAFG00020010352	S100A3 (ENSCAFG00020010349)	S100A2 (ENSCAFG00020010348)	S100A16 (ENSCAFG00020010346)	S100A14 (ENSCAFG00020010345)
Red fox	MODERN SPECIES	23	SYT4 (ENSVVUG00000027777)	ENSVVUG00000027783	ENSVVUG00000027791	SETBP1 (ENSVVUG00000027793)	SLC14A2 (ENSVVUG00000027800)	SLC14A1 (ENSVVUG00000027806)	EPG5 (ENSVVUG00000027828)	PSTPIP2 (ENSVVUG00000027962)	ENSVVUG00000028013	HAUS1 (ENSVVUG00000028089)	CUNH18orf25 (ENSVVUG00000028091)	RNF165 (ENSVVUG00000028094)	LOXHD1 (ENSVVUG00000028114)	ST8SIA5 (ENSVVUG00000028155)	PIAS2 (ENSVVUG00000028165)	KATNAL2 (ENSVVUG00000028183) #22	HDHD2 (ENSVVUG00000028191) #24	IER3IP1 (ENSVVUG00000028197) #23	ENSVVUG00000028208 #25	SMAD2 (ENSVVUG00000028225)	S100A9 (ENSVVUG00000028236)	S100A12 (ENSVVUG00000028241)	S100A8 (ENSVVUG00000028243)	ENSVVUG00000028244	S100A5 (ENSVVUG00000028245)	S100A4 (ENSVVUG00000028246)	S100A3 (ENSVVUG00000028247)	S100A2 (ENSVVUG00000028250)	S100A16 (ENSVVUG00000028251)	S100A14 (ENSVVUG00000028252)	S100A13 (ENSVVUG00000028253)
Felidae	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00390000017839.o.b.b.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741.m	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995	ENSGT00950000183005.a.a
Panthera	ANCESTRAL SPECIES	24	ENSGT00940000159026	ENSGT00390000017839.o.b.b.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00940000153201.j.n	ENSGT00390000008772	ENSGT00390000018741.m	ENSGT00950000183010.a.a.a.b.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Panthera_a	ANCESTRAL SPECIES	26	ENSGT00940000159026	ENSGT00390000017839.o.b.b.b	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00940000153201.j.n	ENSGT00390000008772	ENSGT00390000018741.m	ENSGT00950000183010.a.a.a.b.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
leopard	MODERN SPECIES	43	SYT4 (ENSPPRG00000021203)	ENSPPRG00000022104	SETBP1 (ENSPPRG00000024951)	ENSPPRG00000024428	SLC14A1 (ENSPPRG00000022676)	SIGLEC15 (ENSPPRG00000000322)	EPG5 (ENSPPRG00000000539)	PSTPIP2 (ENSPPRG00000002553)	ATP5F1A (ENSPPRG00000004018)	HAUS1 (ENSPPRG00000004691)	C18orf25 (ENSPPRG00000005801)	RNF165 (ENSPPRG00000006559)	LOXHD1 (ENSPPRG00000016773)	ST8SIA5 (ENSPPRG00000018954)	PIAS2 (ENSPPRG00000023399)	KATNAL2 (ENSPPRG00000023079) #22	HDHD2 (ENSPPRG00000022964) #24	IER3IP1 (ENSPPRG00000022716) #23	ENSPPRG00000000048 #25	SMAD2 (ENSPPRG00000000616)	ZBTB7C (ENSPPRG00000001432)	CTIF (ENSPPRG00000002265)	SMAD7 (ENSPPRG00000002686)	ENSPPRG00000003458	DYM (ENSPPRG00000004872)	ENSPPRG00000004942	ENSPPRG00000006166	LIPG (ENSPPRG00000009382)	ACAA2 (ENSPPRG00000009885)	MYO5B (ENSPPRG00000012444)	CFAP53 (ENSPPRG00000012971)
lion	MODERN SPECIES	12	ZNF236 (ENSPLOG00000018933)	ENSPLOG00000018869	SETBP1 (ENSPLOG00000018804)	ENSPLOG00000018641	SLC14A1 (ENSPLOG00000018513)	SIGLEC15 (ENSPLOG00000018426)	EPG5 (ENSPLOG00000018247)	PSTPIP2 (ENSPLOG00000018143)	ATP5F1A (ENSPLOG00000018053)	HAUS1 (ENSPLOG00000017982)	C18orf25 (ENSPLOG00000017933)	RNF165 (ENSPLOG00000017833)	LOXHD1 (ENSPLOG00000016139)	ST8SIA5 (ENSPLOG00000015755)	PIAS2 (ENSPLOG00000015647)	KATNAL2 (ENSPLOG00000015369) #22	HDHD2 (ENSPLOG00000015310) #24	IER3IP1 (ENSPLOG00000015259) #23	SKOR2 (ENSPLOG00000015171) #25	SMAD2 (ENSPLOG00000014910)	ZBTB7C (ENSPLOG00000014833)	CTIF (ENSPLOG00000014765)	SMAD7 (ENSPLOG00000014649)	ENSPLOG00000014599	DYM (ENSPLOG00000014488)	ENSPLOG00000014438	ENSPLOG00000014279	LIPG (ENSPLOG00000014024)	ACAA2 (ENSPLOG00000013846)	MYO5B (ENSPLOG00000013501)	CFAP53 (ENSPLOG00000013386)
Tiger	MODERN SPECIES	143				SETBP1 (ENSPTIG00000007128)	ENSPTIG00000004707	SLC14A1 (ENSPTIG00000021937)	EPG5 (ENSPTIG00000021849)	PSTPIP2 (ENSPTIG00000021622)	ATP5F1A (ENSPTIG00000020666)	HAUS1 (ENSPTIG00000020327)	C18orf25 (ENSPTIG00000018925)	ENSPTIG00000018660	LOXHD1 (ENSPTIG00000003929)	ST8SIA5 (ENSPTIG00000021493)	PIAS2 (ENSPTIG00000020076)	KATNAL2 (ENSPTIG00000019828) #22	HDHD2 (ENSPTIG00000019534) #24	IER3IP1 (ENSPTIG00000019219) #23	ENSPTIG00000019038 #25	SMAD2 (ENSPTIG00000015931)	ENSPTIG00000014786	CTIF (ENSPTIG00000013761)	ENSPTIG00000013182	ENSPTIG00000012715	DYM (ENSPTIG00000011072)	C18orf32 (ENSPTIG00000009698)	ENSPTIG00000007691	LIPG (ENSPTIG00000000449)	ACAA2 (ENSPTIG00000021827)	MYO5B (ENSPTIG00000019987)	CFAP53 (ENSPTIG00000018895)
Cat	MODERN SPECIES	243	SYT4 (ENSFCAG00000033996)	ENSFCAG00000045259	SETBP1 (ENSFCAG00000007346)	ENSFCAG00000010670	SLC14A1 (ENSFCAG00000025903)	SIGLEC15 (ENSFCAG00000031358)	EPG5 (ENSFCAG00000010674)	PSTPIP2 (ENSFCAG00000029753)	ATP5F1A (ENSFCAG00000025952)	HAUS1 (ENSFCAG00000003729)	CD3H18orf25 (ENSFCAG00000030676)	RNF165 (ENSFCAG00000002784)	LOXHD1 (ENSFCAG00000002785)	ST8SIA5 (ENSFCAG00000002786)	PIAS2 (ENSFCAG00000002787)	KATNAL2 (ENSFCAG00000018778) #22	HDHD2 (ENSFCAG00000002788) #24	IER3IP1 (ENSFCAG00000032516) #23	SKOR2 (ENSFCAG00000045761) #25	SMAD2 (ENSFCAG00000013266)	ZBTB7C (ENSFCAG00000030658)	CTIF (ENSFCAG00000000664)	SMAD7 (ENSFCAG00000042475)	DYM (ENSFCAG00000012954)	ENSFCAG00000022684	RPL17 (ENSFCAG00000011342)	LIPG (ENSFCAG00000012354)	MYO5B (ENSFCAG00000009880)	MBD1 (ENSFCAG00000015730)	CXXC1 (ENSFCAG00000006135)	SKA1 (ENSFCAG00000023341)
Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Equus	ANCESTRAL SPECIES	36	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT01030000240358	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Horse	MODERN SPECIES	29	SYT4 (ENSECAG00000017570)	SETBP1 (ENSECAG00000019793)	SLC14A2 (ENSECAG00000034918)	SLC14A1 (ENSECAG00000014487)	SIGLEC15 (ENSECAG00000018025)	EPG5 (ENSECAG00000002267)	PSTPIP2 (ENSECAG00000019025)	ATP5F1A (ENSECAG00000021561)	HAUS1 (ENSECAG00000016553)	C18orf25 (ENSECAG00000020333)	ENSECAG00000031869	RNF165 (ENSECAG00000021547)	LOXHD1 (ENSECAG00000022216)	ST8SIA5 (ENSECAG00000023864)	PIAS2 (ENSECAG00000002816)	KATNAL2 (ENSECAG00000010207) #22	ENSECAG00000010000	HDHD2 (ENSECAG00000012664) #24	IER3IP1 (ENSECAG00000026829) #23	SKOR2 (ENSECAG00000040113) #25	SMAD2 (ENSECAG00000015132)	ZBTB7C (ENSECAG00000020456)	CTIF (ENSECAG00000020473)	SMAD7 (ENSECAG00000020583)	DYM (ENSECAG00000001651)	C18orf32 (ENSECAG00000046374)	ENSECAG00000011547	LIPG (ENSECAG00000015140)	ENSECAG00000059774	ACAA2 (ENSECAG00000019394)	MYO5B (ENSECAG00000022515)
Donkey	MODERN SPECIES	27	SYT4 (ENSEASG00005016507)	SETBP1 (ENSEASG00005016505)	SLC14A2 (ENSEASG00005016499)	SLC14A1 (ENSEASG00005016489)	EPG5 (ENSEASG00005016455)	SIGLEC15 (ENSEASG00005034343)	PSTPIP2 (ENSEASG00005016428)	ATP5F1A (ENSEASG00005016183)	HAUS1 (ENSEASG00005016165)	C18orf25 (ENSEASG00005016164)	RNF165 (ENSEASG00005016163)	LOXHD1 (ENSEASG00005016151)	ST8SIA5 (ENSEASG00005016136)	PIAS2 (ENSEASG00005016126)	ENSEASG00005016132	KATNAL2 (ENSEASG00005016106) #22	ENSEASG00005028481	HDHD2 (ENSEASG00005016104) #24	IER3IP1 (ENSEASG00005037358) #23	SKOR2 (ENSEASG00005016101) #25	SMAD2 (ENSEASG00005016099)	ZBTB7C (ENSEASG00005016097)	CTIF (ENSEASG00005016094)	SMAD7 (ENSEASG00005016092)	DYM (ENSEASG00005015845)	ENSEASG00005031152	ENSEASG00005025626	LIPG (ENSEASG00005005399)	ACAA2 (ENSEASG00005005395)	MYO5B (ENSEASG00005004025)	ENSEASG00005003857
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.b	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a.b	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00390000002428.a.g.b	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01050000244995
Greater horseshoe bat	MODERN SPECIES	10	SETBP1 (ENSRFEG00010009647)	SLC14A2 (ENSRFEG00010009717)	SLC14A1 (ENSRFEG00010009754)	ENSRFEG00010009827	SIGLEC15 (ENSRFEG00010009873)	EPG5 (ENSRFEG00010009969)	PSTPIP2 (ENSRFEG00010010012)	ATP5F1A (ENSRFEG00010010087)	HAUS1 (ENSRFEG00010010163)	C18orf25 (ENSRFEG00010010226)	RNF165 (ENSRFEG00010010311)	LOXHD1 (ENSRFEG00010010653)	ST8SIA5 (ENSRFEG00010012732)	ENSRFEG00010012921	PIAS2 (ENSRFEG00010012942)	KATNAL2 (ENSRFEG00010013030) #22	ENSRFEG00010013519	HDHD2 (ENSRFEG00010013605) #24	IER3IP1 (ENSRFEG00010013708) #23	SKOR2 (ENSRFEG00010013793) #25	SMAD2 (ENSRFEG00010013927)	ZBTB7C (ENSRFEG00010014086)	CTIF (ENSRFEG00010014128)	SMAD7 (ENSRFEG00010014226)	DYM (ENSRFEG00010014390)	C18orf32 (ENSRFEG00010014487)	LIPG (ENSRFEG00010014542)	ACAA2 (ENSRFEG00010014660)	MYO5B (ENSRFEG00010014892)	CFAP53 (ENSRFEG00010015022)	MBD1 (ENSRFEG00010015077)
Microbat	MODERN SPECIES	953	SYT4 (ENSMLUG00000016472)	ENSMLUG00000022722	ENSMLUG00000013354	SLC14A2 (ENSMLUG00000000990)	SLC14A1 (ENSMLUG00000004885)	SIGLEC15 (ENSMLUG00000004894)	EPG5 (ENSMLUG00000009791)	PSTPIP2 (ENSMLUG00000009831)	ATP5F1A (ENSMLUG00000009856)	HAUS1 (ENSMLUG00000009879)	C18orf25 (ENSMLUG00000008806)	RNF165 (ENSMLUG00000008813)	LOXHD1 (ENSMLUG00000008832)	ST8SIA5 (ENSMLUG00000008890)	ENSMLUG00000008902	KATNAL2 (ENSMLUG00000004078) #22	HDHD2 (ENSMLUG00000004087) #24	ENSMLUG00000028696 #25	ENSMLUG00000028440 #25	SMAD2 (ENSMLUG00000008857)	ZBTB7C (ENSMLUG00000030000)	CTIF (ENSMLUG00000003025)	SMAD7 (ENSMLUG00000016080)	DYM (ENSMLUG00000003419)	ENSMLUG00000029264	LIPG (ENSMLUG00000004113)	ACAA2 (ENSMLUG00000022960)	MYO5B (ENSMLUG00000016701)	ENSMLUG00000016723	MBD1 (ENSMLUG00000008286)	CXXC1 (ENSMLUG00000025328)
Megabat	MODERN SPECIES	6062																KATNAL2 (ENSPVAG00000017469) #22	HDHD2 (ENSPVAG00000017468) #24	IER3IP1 (ENSPVAG00000017467) #23	ENSPVAG00000017466 #25
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157302 #22
Hedgehog	MODERN SPECIES	6197																KATNAL2 (ENSEEUG00000015731) #22
Common shrew	MODERN SPECIES	4832																ENSSARG00000001158 #22
Atlantogenata	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT01050000244995
Afrotheria	ANCESTRAL SPECIES	23	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Afrotheria_a	ANCESTRAL SPECIES	22	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00940000164047.c.b	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.a.b.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01100000263809	ENSGT00950000183005.a.a
Elephant	MODERN SPECIES	375	ENSLAFG00000012899	SETBP1 (ENSLAFG00000003458)	SLC14A2 (ENSLAFG00000026942)	SLC14A1 (ENSLAFG00000009224)	EPG5 (ENSLAFG00000002464)	ENSLAFG00000002465	ATP5F1A (ENSLAFG00000014779)	ENSLAFG00000031983	ENSLAFG00000010897	C18orf25 (ENSLAFG00000013703)	ENSLAFG00000008497	ENSLAFG00000030824	LOXHD1 (ENSLAFG00000008500)	ST8SIA5 (ENSLAFG00000010716)	PIAS2 (ENSLAFG00000018135)	KATNAL2 (ENSLAFG00000004417) #22	HDHD2 (ENSLAFG00000004419) #24	SKOR2 (ENSLAFG00000020778) #25	SMAD2 (ENSLAFG00000000143)	ZBTB7C (ENSLAFG00000003436)	CTIF (ENSLAFG00000016335)	SMAD7 (ENSLAFG00000008013)	DYM (ENSLAFG00000017747)	C18orf32 (ENSLAFG00000021351)	RPL17 (ENSLAFG00000005569)	LIPG (ENSLAFG00000003595)	ACAA2 (ENSLAFG00000022796)	MYO5B (ENSLAFG00000015591)	ENSLAFG00000015611	MBD1 (ENSLAFG00000031328)	CXXC1 (ENSLAFG00000030706)
Hyrax	MODERN SPECIES	5089																ENSPCAG00000007867 #22	HDHD2 (ENSPCAG00000007936) #24
Tenrec	MODERN SPECIES	6019																KATNAL2 (ENSETEG00000007310) #22
Xenarthra	ANCESTRAL SPECIES	212				ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E.o.a	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.gb	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25
Armadillo	MODERN SPECIES	4785			SLC14A2 (ENSDNOG00000017162)	SLC14A1 (ENSDNOG00000032760)	SIGLEC15 (ENSDNOG00000014982)	ENSDNOG00000035305	ENSDNOG00000014995	PSTPIP2 (ENSDNOG00000037520)	ENSDNOG00000006331	HAUS1 (ENSDNOG00000033685)	C18orf25 (ENSDNOG00000048603)	RNF165 (ENSDNOG00000023586)	LOXHD1 (ENSDNOG00000005137)	ST8SIA5 (ENSDNOG00000032248)	ENSDNOG00000011855	KATNAL2 (ENSDNOG00000001108) #22	HDHD2 (ENSDNOG00000001000) #24	IER3IP1 (ENSDNOG00000032201) #23	ENSDNOG00000025727 #25
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.e	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01070000254624	ENSGT00940000164634
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.e	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01070000254624	ENSGT00940000164634
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.e	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.b	ENSGT00950000183010.a.b.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01070000254624
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.b	ENSGT00390000018729.a.a	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.e	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01070000254624	ENSGT00940000164634
Common wonbat	MODERN SPECIES	1028	SETBP1 (ENSVURG00010022154)	ENSVURG00010022157	SLC14A2 (ENSVURG00010022169)	SLC14A1 (ENSVURG00010022183)	ENSVURG00010022201	EPG5 (ENSVURG00010022212)	PSTPIP2 (ENSVURG00010022237)	ENSVURG00010022245	HAUS1 (ENSVURG00010022251)	C18orf25 (ENSVURG00010022255)	RNF165 (ENSVURG00010022261)	ENSVURG00010022265	ENSVURG00010022268	ST8SIA5 (ENSVURG00010022274)	PIAS2 (ENSVURG00010022283)	KATNAL2 (ENSVURG00010022300) #22	HDHD2 (ENSVURG00010000102) #24	IER3IP1 (ENSVURG00010000126) #23	SKOR2 (ENSVURG00010000155) #25	SMAD2 (ENSVURG00010000218)	ZBTB7C (ENSVURG00010000266)	CTIF (ENSVURG00010000308)	SMAD7 (ENSVURG00010000339)	DYM (ENSVURG00010000407)	C18orf32 (ENSVURG00010000458)	LIPG (ENSVURG00010000510)	ACAA2 (ENSVURG00010000570)	MYO5B (ENSVURG00010000687)	ENSVURG00010000828	ENSVURG00010000841	ENSVURG00010000853
koala	MODERN SPECIES	22	ENSPCIG00000011742	ENSPCIG00000019335	SLC14A2 (ENSPCIG00000019330)	SLC14A1 (ENSPCIG00000019326)	ENSPCIG00000019325	EPG5 (ENSPCIG00000019029)	PSTPIP2 (ENSPCIG00000026564)	ENSPCIG00000006831	ENSPCIG00000006824	HAUS1 (ENSPCIG00000006819)	C18orf25 (ENSPCIG00000006809)	RNF165 (ENSPCIG00000006802)	ENSPCIG00000006735	ENSPCIG00000006722	PIAS2 (ENSPCIG00000006717)	KATNAL2 (ENSPCIG00000006712) #22	HDHD2 (ENSPCIG00000006706) #24	IER3IP1 (ENSPCIG00000033187) #23	SKOR2 (ENSPCIG00000006700) #25	SMAD2 (ENSPCIG00000015690)	ZBTB7C (ENSPCIG00000015685)	CTIF (ENSPCIG00000026247)	SMAD7 (ENSPCIG00000019168)	DYM (ENSPCIG00000031532)	C18orf32 (ENSPCIG00000032291)	ENSPCIG00000028230	LIPG (ENSPCIG00000028229)
Wallaby	MODERN SPECIES	7494																ENSMEUG00000011954 #22
Tasmanian devil	MODERN SPECIES		RIT2 (ENSSHAG00000027427)	SYT4 (ENSSHAG00000030482)	SETBP1 (ENSSHAG00000011290)	SLC14A2 (ENSSHAG00000016114)	SLC14A1 (ENSSHAG00000032087)	ENSSHAG00000016659	EPG5 (ENSSHAG00000016721)	PSTPIP2 (ENSSHAG00000017036)	ENSSHAG00000017177	HAUS1 (ENSSHAG00000030289)	C18orf25 (ENSSHAG00000017414)	RNF165 (ENSSHAG00000017805)	ENSSHAG00000017868	ST8SIA5 (ENSSHAG00000021657)	PIAS2 (ENSSHAG00000005954)	KATNAL2 (ENSSHAG00000003042) #22	HDHD2 (ENSSHAG00000024217) #24	SKOR2 (ENSSHAG00000025447) #25	ENSSHAG00000012107	SMAD2 (ENSSHAG00000012837)	ZBTB7C (ENSSHAG00000024277)	CTIF (ENSSHAG00000027815)	SMAD7 (ENSSHAG00000017444)	DYM (ENSSHAG00000001181)	ENSSHAG00000030929	ENSSHAG00000003060	LIPG (ENSSHAG00000004911)	ACAA2 (ENSSHAG00000001241)	ENSSHAG00000003364	ENSSHAG00000010062	ENSSHAG00000026350
Opossum	MODERN SPECIES	2	ENSMODG00000045220	ENSMODG00000040480	ENSMODG00000003137	EPG5 (ENSMODG00000025166)	ENSMODG00000025419	PSTPIP2 (ENSMODG00000003193)	ATP5F1A (ENSMODG00000003241)	HAUS1 (ENSMODG00000003208)	C18orf25 (ENSMODG00000003250)	ENSMODG00000043074	RNF165 (ENSMODG00000003260)	LOXHD1 (ENSMODG00000003285)	ST8SIA5 (ENSMODG00000003305)	ENSMODG00000048012	ENSMODG00000003324	KATNAL2 (ENSMODG00000003358) #22	HDHD2 (ENSMODG00000044379) #24	IER3IP1 (ENSMODG00000037588) #23	SKOR2 (ENSMODG00000003381) #25	SMAD2 (ENSMODG00000003393)	ENSMODG00000042470	ZBTB7C (ENSMODG00000003412)	ENSMODG00000046916	CTIF (ENSMODG00000003464)	SMAD7 (ENSMODG00000039523)	DYM (ENSMODG00000003506)	ENSMODG00000050373	C18orf32 (ENSMODG00000003518)	ENSMODG00000003534	LIPG (ENSMODG00000003564)	ENSMODG00000039010
Platypus	MODERN SPECIES	14	ENSOANG00000045452	ENSOANG00000045275	ENSOANG00000021740	TPGS2 (ENSOANG00000004563)	ENSOANG00000045749	AQP3 (ENSOANG00000014661)	NOL6 (ENSOANG00000010217)	UBE2R2 (ENSOANG00000036151)	UBAP2 (ENSOANG00000010219)	ENSOANG00000048405	C18orf25 (ENSOANG00000004994)	RNF165 (ENSOANG00000014831)	LOXHD1 (ENSOANG00000014833)	ST8SIA5 (ENSOANG00000014835)	PIAS2 (ENSOANG00000012017)	KATNAL2 (ENSOANG00000012018) #22	HDHD2 (ENSOANG00000012019) #24	ENSOANG00000042577	IER3IP1 (ENSOANG00000045983) #23	SKOR2 (ENSOANG00000038832) #25	SMAD2 (ENSOANG00000001971)	ZBTB7C (ENSOANG00000005929)	CTIF (ENSOANG00000001337)	ENSOANG00000007611	DYM (ENSOANG00000007612)	ENSOANG00000002910	LIPG (ENSOANG00000001131)	ACAA2 (ENSOANG00000002559)	MYO5B (ENSOANG00000008127)	ENSOANG00000008126	ENSOANG00000008125
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000158784	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000154779.a.a	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Toxicofera	ANCESTRAL SPECIES	18	ENSGT00940000158784	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000154779.a.a	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Elapidae	ANCESTRAL SPECIES	19	ENSGT00940000158784	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000154779.a.a	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Elapidae_a	ANCESTRAL SPECIES	24															ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Blue-lipped sea krait	MODERN SPECIES	807																KATNAL2 (ENSLLTG00000012074) #22
Acanthophiinae	ANCESTRAL SPECIES	24															ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Eastern brown snake	MODERN SPECIES	2														ENSPTXG00000006543	PIAS2 (ENSPTXG00000006574)	KATNAL2 (ENSPTXG00000006575) #22	HDHD2 (ENSPTXG00000006576) #24	IER3IP1 (ENSPTXG00000006577) #23	SKOR2 (ENSPTXG00000006578) #25	SMAD2 (ENSPTXG00000006579)	ZBTB7C (ENSPTXG00000006580)	CTIF (ENSPTXG00000006581)	SMAD7 (ENSPTXG00000006582)	DYM (ENSPTXG00000006583)	C18orf32 (ENSPTXG00000006692)	ENSPTXG00000006694	LIPG (ENSPTXG00000006699)	ACAA2 (ENSPTXG00000006871)	MYO5B (ENSPTXG00000006873)	ENSPTXG00000017817	ENSPTXG00000017818
Mainland tiger snake	MODERN SPECIES	366														ENSNSUG00000010162	PIAS2 (ENSNSUG00000010159)	KATNAL2 (ENSNSUG00000010158) #22	ENSNSUG00000010157	IER3IP1 (ENSNSUG00000010156) #23	SKOR2 (ENSNSUG00000010155) #25
Indian cobra	MODERN SPECIES	1	ENSNNAG00000015877	PIK3C3 (ENSNNAG00000015843)	ENSNNAG00000015828	SYT4 (ENSNNAG00000015811)	ENSNNAG00000015772	PSTPIP2 (ENSNNAG00000015692)	ATP5F1A (ENSNNAG00000015663)	ENSNNAG00000015653	C18orf25 (ENSNNAG00000015617)	ENSNNAG00000015609	RNF165 (ENSNNAG00000015582)	LOXHD1 (ENSNNAG00000014987)	ST8SIA5 (ENSNNAG00000014880)	ENSNNAG00000014747	PIAS2 (ENSNNAG00000014631)	KATNAL2 (ENSNNAG00000014598) #22	ENSNNAG00000014575 #24	IER3IP1 (ENSNNAG00000014563) #23	ENSNNAG00000014533 #24	SMAD2 (ENSNNAG00000014472)	ZBTB7C (ENSNNAG00000014457)	CTIF (ENSNNAG00000014324)	SMAD7 (ENSNNAG00000014299)	DYM (ENSNNAG00000014278)	C18orf32 (ENSNNAG00000014266)	ENSNNAG00000014239	LIPG (ENSNNAG00000013974)	ACAA2 (ENSNNAG00000013909)	MYO5B (ENSNNAG00000013682)	ENSNNAG00000013638	ENSNNAG00000013628
Lizard	MODERN SPECIES		ENSACAG00000012950	ENSACAG00000040459	EPG5 (ENSACAG00000012846)	ENSACAG00000044541	PSTPIP2 (ENSACAG00000012789)	ATP5F1A (ENSACAG00000012698)	HAUS1 (ENSACAG00000012652)	C18orf25 (ENSACAG00000012627)	ENSACAG00000040406	RNF165 (ENSACAG00000012611)	LOXHD1 (ENSACAG00000012527)	ENSACAG00000038362	ST8SIA5 (ENSACAG00000012397)	ENSACAG00000012275	PIAS2 (ENSACAG00000012084)	KATNAL2 (ENSACAG00000012057) #22	HDHD2 (ENSACAG00000044652) #24	ENSACAG00000036900	SKOR2 (ENSACAG00000006146) #25	ENSACAG00000028574	KATNBL1 (ENSACAG00000015339)	EMC7 (ENSACAG00000015350)	ENSACAG00000015369	CHRM5 (ENSACAG00000015381)	AVEN (ENSACAG00000015390)	ENSACAG00000034962	RYR3 (ENSACAG00000015401)	ENSACAG00000036056	ENSACAG00000035791	ENSACAG00000038205	FMN1 (ENSACAG00000015791)
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000156943	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000014558	SETBP1 (ENSPMRG00000014561)	ENSPMRG00000014565	ENSPMRG00000014575	EPG5 (ENSPMRG00000014633)	PSTPIP2 (ENSPMRG00000014981)	ATP5F1A (ENSPMRG00000014993)	ENSPMRG00000015002	C18orf25 (ENSPMRG00000015004)	ENSPMRG00000015011	RNF165 (ENSPMRG00000015013)	LOXHD1 (ENSPMRG00000015049)	ST8SIA5 (ENSPMRG00000015167)	ENSPMRG00000015174	PIAS2 (ENSPMRG00000015190)	KATNAL2 (ENSPMRG00000015210) #22	HDHD2 (ENSPMRG00000009442) #24	SKOR2 (ENSPMRG00000009448) #25	SMAD2 (ENSPMRG00000009455)	ENSPMRG00000009469	ZBTB7C (ENSPMRG00000009478)	CTIF (ENSPMRG00000009496)	SMAD7 (ENSPMRG00000009512)	DYM (ENSPMRG00000009531)	C18orf32 (ENSPMRG00000009571)	ENSPMRG00000009575	LIPG (ENSPMRG00000009592)	ACAA2 (ENSPMRG00000009605)	MYO5B (ENSPMRG00000009756)	ENSPMRG00000010121	ENSPMRG00000010128
Argentine black and white tegu	MODERN SPECIES	34	SYT4 (ENSSMRG00000000987)	ENSSMRG00000000984	SETBP1 (ENSSMRG00000000927)	ENSSMRG00000000842	ENSSMRG00000000808	EPG5 (ENSSMRG00000000761)	PSTPIP2 (ENSSMRG00000000716)	ATP5F1A (ENSSMRG00000000705)	HAUS1 (ENSSMRG00000000673)	C18orf25 (ENSSMRG00000000659)	RNF165 (ENSSMRG00000000637)	LOXHD1 (ENSSMRG00000000443)	ST8SIA5 (ENSSMRG00000000377)	ENSSMRG00000000298	PIAS2 (ENSSMRG00000000256)	KATNAL2 (ENSSMRG00000000219) #22	HDHD2 (ENSSMRG00000000191) #24	IER3IP1 (ENSSMRG00000000137) #23	SKOR2 (ENSSMRG00000000124) #25	SMAD2 (ENSSMRG00000016595)	ZBTB7C (ENSSMRG00000016594)	ENSSMRG00000016592	CTIF (ENSSMRG00000016591)	SMAD7 (ENSSMRG00000016590)	DYM (ENSSMRG00000016587)	C18orf32 (ENSSMRG00000016584)	RPL17 (ENSSMRG00000016581)	LIPG (ENSSMRG00000016580)	ACAA2 (ENSSMRG00000016578)	MYO5B (ENSSMRG00000016569)	ENSSMRG00000016557
tuatara	MODERN SPECIES	631														ENSSPUG00000014537	PIAS2 (ENSSPUG00000014552)	KATNAL2 (ENSSPUG00000014578) #22	HDHD2 (ENSSPUG00000014604) #24	ENSSPUG00000014624	ZBTB7C (ENSSPUG00000014644)	ENSSPUG00000014650	CTIF (ENSSPUG00000014734)	SMAD7 (ENSSPUG00000015295)
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Aves	ANCESTRAL SPECIES	4	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Neognathae	ANCESTRAL SPECIES	12	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.c.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.hb.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00940000167769	ENSGT00390000016167.c.b	ENSGT00550000074846.db	ENSGT00390000006029	ENSGT00390000016167.d	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.hb.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814.b	ENSGT00940000153432.A.b.g	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Golden eagle	MODERN SPECIES	91	SETBP1 (ENSACCG00020016273)	ENSACCG00020016281	ENSACCG00020016311	ENSACCG00020016332	EPG5 (ENSACCG00020016353)	PSTPIP2 (ENSACCG00020016388)	ATP5F1A (ENSACCG00020016399)	HAUS1 (ENSACCG00020016407)	C18orf25 (ENSACCG00020016442)	ENSACCG00020016448	RNF165 (ENSACCG00020016454)	LOXHD1 (ENSACCG00020016482)	ST8SIA5 (ENSACCG00020016492)	ENSACCG00020016495	PIAS2 (ENSACCG00020016500)	KATNAL2 (ENSACCG00020016503) #22	HDHD2 (ENSACCG00020016506) #24	IER3IP1 (ENSACCG00020016510) #23	SKOR2 (ENSACCG00020016513) #25	SMAD2 (ENSACCG00020016518)	ZBTB7C (ENSACCG00020016526)	CTIF (ENSACCG00020016528)	SMAD7 (ENSACCG00020016530)	DYM (ENSACCG00020016531)	C18orf32 (ENSACCG00020016535)	RPL17 (ENSACCG00020016537)	LIPG (ENSACCG00020016557)	ACAA2 (ENSACCG00020016573)	MYO5B (ENSACCG00020016656)	ENSACCG00020009495	ENSACCG00020009516
Kakapo	MODERN SPECIES	19	ENSSHBG00005008557	ENSSHBG00005008572	ENSSHBG00005008633	ENSSHBG00005008642	EPG5 (ENSSHBG00005008678)	ENSSHBG00005008791	PSTPIP2 (ENSSHBG00005008805)	ENSSHBG00005008822	ENSSHBG00005008832	ENSSHBG00005008835	RNF165 (ENSSHBG00005008844)	LOXHD1 (ENSSHBG00005008933)	ST8SIA5 (ENSSHBG00005009922)	ENSSHBG00005009938	ENSSHBG00005009962	KATNAL2 (ENSSHBG00005010077) #22	HDHD2 (ENSSHBG00005010840) #24	IER3IP1 (ENSSHBG00005010867) #23	ENSSHBG00005010880 #25	ENSSHBG00005010919	ZBTB7C (ENSSHBG00005010973)	ENSSHBG00005011002	SMAD7 (ENSSHBG00005011025)	DYM (ENSSHBG00005011046)	C18orf32 (ENSSHBG00005011080)	ENSSHBG00005011099	LIPG (ENSSHBG00005011192)	ACAA2 (ENSSHBG00005011224)	MYO5B (ENSSHBG00005011309)	ENSSHBG00005011586	ENSSHBG00005011601
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.c.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.hb.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Great tit	MODERN SPECIES	642	SYT4 (ENSPMJG00000004942)	SETBP1 (ENSPMJG00000004924)	ENSPMJG00000004863	ENSPMJG00000004854	ENSPMJG00000004850	EPG5 (ENSPMJG00000004806)	PSTPIP2 (ENSPMJG00000004774)	ATP5F1A (ENSPMJG00000003455)	HAUS1 (ENSPMJG00000003444)	C18orf25 (ENSPMJG00000003436)	RNF165 (ENSPMJG00000003419)	LOXHD1 (ENSPMJG00000003381)	ENSPMJG00000003355	ST8SIA5 (ENSPMJG00000003351)	PIAS2 (ENSPMJG00000003313)	KATNAL2 (ENSPMJG00000003284) #22	HDHD2 (ENSPMJG00000003109) #24	IER3IP1 (ENSPMJG00000003108) #23	SKOR2 (ENSPMJG00000003106) #25	SMAD2 (ENSPMJG00000002989)	ZBTB7C (ENSPMJG00000002973)	CTIF (ENSPMJG00000002914)	SMAD7 (ENSPMJG00000002909)	DYM (ENSPMJG00000002819)	C18orf32 (ENSPMJG00000002712)	ENSPMJG00000002708	LIPG (ENSPMJG00000002703)	ACAA2 (ENSPMJG00000002693)	MYO5B (ENSPMJG00000002662)	ENSPMJG00000002582	ENSPMJG00000002577
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.c.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.hb.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872.j	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Flycatcher	MODERN SPECIES	561	PIK3C3 (ENSFALG00000008849)	RIT2 (ENSFALG00000008852)	SYT4 (ENSFALG00000008854)	SETBP1 (ENSFALG00000008857)	ENSFALG00000008859	ENSFALG00000024024	ENSFALG00000008861	EPG5 (ENSFALG00000008862)	ATP5F1A (ENSFALG00000008875)	HAUS1 (ENSFALG00000008884)	C18orf25 (ENSFALG00000008886)	RNF165 (ENSFALG00000023345)	LOXHD1 (ENSFALG00000008897)	ST8SIA5 (ENSFALG00000008899)	PIAS2 (ENSFALG00000008918)	KATNAL2 (ENSFALG00000008928) #22	HDHD2 (ENSFALG00000008930) #24	IER3IP1 (ENSFALG00000026006) #23	SMAD2 (ENSFALG00000008934)	ZBTB7C (ENSFALG00000008940)	ENSFALG00000028976	CTIF (ENSFALG00000024197)	SMAD7 (ENSFALG00000008945)	DYM (ENSFALG00000008953)	C18orf32 (ENSFALG00000008961)	ENSFALG00000008965	LIPG (ENSFALG00000008973)	ACAA2 (ENSFALG00000008979)	MYO5B (ENSFALG00000008996)	ENSFALG00000009012	ENSFALG00000002576
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.c.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.hb.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872.j	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Passeroidea	ANCESTRAL SPECIES	27	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.c.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b.hb.a	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872.j	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Zebra finch	MODERN SPECIES	104															PIAS2 (ENSTGUG00000000006)	KATNAL2 (ENSTGUG00000000013) #22	HDHD2 (ENSTGUG00000028684) #24	IER3IP1 (ENSTGUG00000028694) #23	ENSTGUG00000014263 #25	SMAD2 (ENSTGUG00000000016)	ZBTB7C (ENSTGUG00000000028)	CTIF (ENSTGUG00000000030)	SMAD7 (ENSTGUG00000000034)	DYM (ENSTGUG00000000035)	ENSTGUG00000000043	RPL17 (ENSTGUG00000028072)	ENSTGUG00000028962	ENSTGUG00000000071	ENSTGUG00000000072	ENSTGUG00000018125	MYO5B (ENSTGUG00000000053)
Common canary	MODERN SPECIES	32	RIT2 (ENSSCAG00000016353)	SYT4 (ENSSCAG00000016351)	SETBP1 (ENSSCAG00000016346)	ENSSCAG00000016338	ENSSCAG00000016329	ENSSCAG00000016324	EPG5 (ENSSCAG00000016319)	PSTPIP2 (ENSSCAG00000016312)	ENSSCAG00000016307	HAUS1 (ENSSCAG00000016303)	ENSSCAG00000016301	RNF165 (ENSSCAG00000016296)	LOXHD1 (ENSSCAG00000016279)	ST8SIA5 (ENSSCAG00000016270)	ENSSCAG00000016263	KATNAL2 (ENSSCAG00000016261) #22	HDHD2 (ENSSCAG00000016258) #24	IER3IP1 (ENSSCAG00000016254) #23	ENSSCAG00000016249	ZBTB7C (ENSSCAG00000016243)	ENSSCAG00000016237	SMAD7 (ENSSCAG00000016234)	DYM (ENSSCAG00000016230)	ENSSCAG00000016226	ENSSCAG00000016220	LIPG (ENSSCAG00000016215)	ACAA2 (ENSSCAG00000016211)	MYO5B (ENSSCAG00000015157)	ENSSCAG00000014412	ENSSCAG00000014408	ENSSCAG00000014403
Medium ground finch	MODERN SPECIES	68	RIT2 (ENSGFOG00000012761)	SYT4 (ENSGFOG00000012768)	SETBP1 (ENSGFOG00000012775)	ENSGFOG00000012786	ENSGFOG00000012800	EPG5 (ENSGFOG00000012823)	PSTPIP2 (ENSGFOG00000012952)	ENSGFOG00000012961	HAUS1 (ENSGFOG00000012970)	ENSGFOG00000012973	ENSGFOG00000012977	RNF165 (ENSGFOG00000012981)	LOXHD1 (ENSGFOG00000012988)	ST8SIA5 (ENSGFOG00000013005)	ENSGFOG00000013009	KATNAL2 (ENSGFOG00000013015) #22	HDHD2 (ENSGFOG00000013020) #24	IER3IP1 (ENSGFOG00000013022) #23	ENSGFOG00000013025	ZBTB7C (ENSGFOG00000013033)	CTIF (ENSGFOG00000013039)	SMAD7 (ENSGFOG00000013050)	DYM (ENSGFOG00000013055)	ENSGFOG00000013074	ENSGFOG00000013078	LIPG (ENSGFOG00000013083)	ACAA2 (ENSGFOG00000013087)	MYO5B (ENSGFOG00000013103)	ENSGFOG00000013164	ENSGFOG00000013168	ENSGFOG00000013172
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Anatidae	ANCESTRAL SPECIES	55	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.c	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Duck	MODERN SPECIES	4281	SETBP1 (ENSAPLG00000017129)	ENSAPLG00000012208	ENSAPLG00000024359	ENSAPLG00000024300	EPG5 (ENSAPLG00000011964)	PSTPIP2 (ENSAPLG00000011930)	ATP5F1A (ENSAPLG00000011512)	HAUS1 (ENSAPLG00000011232)	C18orf25 (ENSAPLG00000017723)	RNF165 (ENSAPLG00000006619)	ENSAPLG00000018736	LOXHD1 (ENSAPLG00000010718)	ST8SIA5 (ENSAPLG00000011069)	ENSAPLG00000022068	PIAS2 (ENSAPLG00000005190)	KATNAL2 (ENSAPLG00000005005) #22	HDHD2 (ENSAPLG00000004974) #24	IER3IP1 (ENSAPLG00000018295) #23	SKOR2 (ENSAPLG00000022487) #25	SMAD2 (ENSAPLG00000004964)	ZBTB7C (ENSAPLG00000016660)	CTIF (ENSAPLG00000014486)	SMAD7 (ENSAPLG00000001268)	ENSAPLG00000022343	DYM (ENSAPLG00000007759)	C18orf32 (ENSAPLG00000017090)	ENSAPLG00000008451	LIPG (ENSAPLG00000008809)	ACAA2 (ENSAPLG00000006058)	MYO5B (ENSAPLG00000005427)	ENSAPLG00000005297
Pink-footed goose	MODERN SPECIES	346											C18orf25 (ENSABRG00000019430)	RNF165 (ENSABRG00000019433)	ENSABRG00000019443	ST8SIA5 (ENSABRG00000019447)	PIAS2 (ENSABRG00000019457)	KATNAL2 (ENSABRG00000019473) #22	ENSABRG00000019488
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d.a.b	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872.k	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000162144
Japanese quail	MODERN SPECIES	699	PIK3C3 (ENSCJPG00005005375)	RIT2 (ENSCJPG00005005369)	SYT4 (ENSCJPG00005005351)	SETBP1 (ENSCJPG00005005325)	ENSCJPG00005005294	ENSCJPG00005005293	EPG5 (ENSCJPG00005005256)	PSTPIP2 (ENSCJPG00005005209)	ATP5F1A (ENSCJPG00005005208)	HAUS1 (ENSCJPG00005005206)	C18orf25 (ENSCJPG00005005205)	RNF165 (ENSCJPG00005005197)	LOXHD1 (ENSCJPG00005005160)	ST8SIA5 (ENSCJPG00005005152)	PIAS2 (ENSCJPG00005004954)	KATNAL2 (ENSCJPG00005004948) #22	HDHD2 (ENSCJPG00005004947) #24	IER3IP1 (ENSCJPG00005004943) #23	SKOR2 (ENSCJPG00005004937) #25	SMAD2 (ENSCJPG00005004935)	ZBTB7C (ENSCJPG00005004933)	CTIF (ENSCJPG00005004929)	SMAD7 (ENSCJPG00005004928)	DYM (ENSCJPG00005004924)	C18orf32 (ENSCJPG00005004922)	ENSCJPG00005004917	LIPG (ENSCJPG00005004913)	ACAA2 (ENSCJPG00005004912)	LMAN1 (ENSCJPG00005004911)	CPLX4 (ENSCJPG00005004910)	RAX (ENSCJPG00005004909)
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846.eb.b	ENSGT00390000006029	ENSGT00390000016167.a	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a.d.a.b	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872.k	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000162144
Chicken	MODERN SPECIES	131	RIT2 (ENSGALG00010012204)	SYT4 (ENSGALG00010012160)	SETBP1 (ENSGALG00010012148)	ENSGALG00010012134	ENSGALG00010012131	ENSGALG00010012126	EPG5 (ENSGALG00010012119)	PSTPIP2 (ENSGALG00010012108)	ATP5F1AZ (ENSGALG00010012088)	HAUS1 (ENSGALG00010012082)	CZH18ORF25 (ENSGALG00010012067)	RNF165 (ENSGALG00010012051)	LOXHD1 (ENSGALG00010012046)	ST8SIA5 (ENSGALG00010009858)	PIAS2 (ENSGALG00010009774)	KATNAL2 (ENSGALG00010011422) #22	HDHD2 (ENSGALG00010012845) #24	IER3IP1 (ENSGALG00010011367) #23	SKOR2 (ENSGALG00010011268) #25	SMAD2 (ENSGALG00010010623)	ZBTB7C (ENSGALG00010010049)	CTIF (ENSGALG00010010007)	SMAD7 (ENSGALG00010009910)	DYM (ENSGALG00010010922)	ENSGALG00010011203	RPL17 (ENSGALG00010011192)	LIPG (ENSGALG00010009013)	ACAA2 (ENSGALG00010010463)	LMAN1L (ENSGALG00010010445)	CPLX4 (ENSGALG00010010415)	RAX (ENSGALG00010010409)
Turkey	MODERN SPECIES	1299	PIK3C3 (ENSMGAG00000009060)	SYT4 (ENSMGAG00000001587)	SETBP1 (ENSMGAG00000009445)	ENSMGAG00000009227	ENSMGAG00000009233	ENSMGAG00000001401	EPG5 (ENSMGAG00000001532)	PSTPIP2 (ENSMGAG00000001515)	ENSMGAG00000009963	HAUS1 (ENSMGAG00000001559)	C18orf25 (ENSMGAG00000021854)	RNF165 (ENSMGAG00000001405)	LOXHD1 (ENSMGAG00000016776)	ST8SIA5 (ENSMGAG00000016483)	ENSMGAG00000001384	KATNAL2 (ENSMGAG00000004476) #22	HDHD2 (ENSMGAG00000004803) #24	IER3IP1 (ENSMGAG00000020998) #23	SMAD2 (ENSMGAG00000001351)	ZBTB7C (ENSMGAG00000001366)	CTIF (ENSMGAG00000021290)	ENSMGAG00000022342	SEC11C (ENSMGAG00000001165)	ENSMGAG00000001162	MALT1 (ENSMGAG00000001082)	ENSMGAG00000001342	ALPK2 (ENSMGAG00000018725)	ENSMGAG00000021263	NEDD4L (ENSMGAG00000000935)	ENSMGAG00000001140	ENSMGAG00000001102
African ostrich	MODERN SPECIES	306	RIT2 (ENSSCUG00000001756)	SYT4 (ENSSCUG00000001753)	SETBP1 (ENSSCUG00000001747)	ENSSCUG00000001742	ENSSCUG00000001740	EPG5 (ENSSCUG00000001722)	PSTPIP2 (ENSSCUG00000001712)	ATP5F1A (ENSSCUG00000001706)	HAUS1 (ENSSCUG00000001700)	C18orf25 (ENSSCUG00000001690)	RNF165 (ENSSCUG00000001684)	LOXHD1 (ENSSCUG00000001676)	ST8SIA5 (ENSSCUG00000001666)	ENSSCUG00000001625	PIAS2 (ENSSCUG00000001592)	KATNAL2 (ENSSCUG00000001589) #22	HDHD2 (ENSSCUG00000001588) #24	IER3IP1 (ENSSCUG00000001587) #23	SMAD2 (ENSSCUG00000001582)	ZBTB7C (ENSSCUG00000001580)	CTIF (ENSSCUG00000001577)	SMAD7 (ENSSCUG00000001575)	ENSSCUG00000001573	DYM (ENSSCUG00000001566)	C18orf32 (ENSSCUG00000001562)	ENSSCUG00000001555	LIPG (ENSSCUG00000001552)	ACAA2 (ENSSCUG00000001545)	MYO5B (ENSSCUG00000001541)	ENSSCUG00000001539	ENSSCUG00000001536
Australian saltwater crocodile	MODERN SPECIES	29	ENSCPRG00005014968	ENSCPRG00005014964	ENSCPRG00005014958	ENSCPRG00005014943	EPG5 (ENSCPRG00005014928)	PSTPIP2 (ENSCPRG00005014911)	ATP5F1A (ENSCPRG00005014898)	HAUS1 (ENSCPRG00005014890)	C18orf25 (ENSCPRG00005014887)	RNF165 (ENSCPRG00005014878)	LOXHD1 (ENSCPRG00005014818)	ST8SIA5 (ENSCPRG00005014802)	ENSCPRG00005014800	ENSCPRG00005014797	PIAS2 (ENSCPRG00005014791)	KATNAL2 (ENSCPRG00005014784) #22	HDHD2 (ENSCPRG00005014780) #24	IER3IP1 (ENSCPRG00005014776) #23	SMAD2 (ENSCPRG00005014766)	ZBTB7C (ENSCPRG00005014760)	CTIF (ENSCPRG00005014748)	SMAD7 (ENSCPRG00005014735)	DYM (ENSCPRG00005014651)	C18orf32 (ENSCPRG00005014637)	ENSCPRG00005014628	LIPG (ENSCPRG00005014622)	ACAA2 (ENSCPRG00005014619)	ENSCPRG00005014614	ENSCPRG00005014610	ENSCPRG00005014216	ME2 (ENSCPRG00005014168)
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00940000161402	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c	ENSGT00390000018729.a.d	ENSGT01080000257333.E.n	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c.a	ENSGT00390000018729.a.c.b	ENSGT00390000018729.a.d	ENSGT01080000257333.E.n	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c.a	ENSGT00390000018729.a.c.b	ENSGT00390000018729.a.d	ENSGT01080000257333.E.n	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
painted turtle	MODERN SPECIES	15	SETBP1 (ENSCPBG00000025743)	ENSCPBG00000025740	ENSCPBG00000025738	ENSCPBG00000025736	ENSCPBG00000025735	EPG5 (ENSCPBG00000025732)	PSTPIP2 (ENSCPBG00000025723)	ATP5F1A (ENSCPBG00000025716)	HAUS1 (ENSCPBG00000025713)	C18orf25 (ENSCPBG00000025709)	RNF165 (ENSCPBG00000025704)	LOXHD1 (ENSCPBG00000025693)	ST8SIA5 (ENSCPBG00000025690)	ENSCPBG00000025689	PIAS2 (ENSCPBG00000025688)	KATNAL2 (ENSCPBG00000025685) #22	HDHD2 (ENSCPBG00000025683) #24	IER3IP1 (ENSCPBG00000025681) #23	SKOR2 (ENSCPBG00000025680) #25	SMAD2 (ENSCPBG00000025672)	ZBTB7C (ENSCPBG00000025669)	CTIF (ENSCPBG00000025654)	SMAD7 (ENSCPBG00000025649)	DYM (ENSCPBG00000025646)	C18orf32 (ENSCPBG00000025643)	ENSCPBG00000025638	LIPG (ENSCPBG00000025633)	ACAA2 (ENSCPBG00000025630)	MYO5B (ENSCPBG00000025623)	ENSCPBG00000025621	ENSCPBG00000025620
Three-toed box turtle	MODERN SPECIES	29	ENSTMTG00000000935	ENSTMTG00000000956	ENSTMTG00000000964	EPG5 (ENSTMTG00000000989)	PSTPIP2 (ENSTMTG00000001028)	ATP5F1A (ENSTMTG00000001043)	HAUS1 (ENSTMTG00000001059)	ENSTMTG00000001068	C18orf25 (ENSTMTG00000001078)	ENSTMTG00000001086	RNF165 (ENSTMTG00000001099)	LOXHD1 (ENSTMTG00000001168)	ST8SIA5 (ENSTMTG00000001323)	ENSTMTG00000001347	PIAS2 (ENSTMTG00000001368)	KATNAL2 (ENSTMTG00000001412) #22	HDHD2 (ENSTMTG00000001421) #24	IER3IP1 (ENSTMTG00000001428) #23	SKOR2 (ENSTMTG00000001437) #25	SMAD2 (ENSTMTG00000001451)	ZBTB7C (ENSTMTG00000001470)	CTIF (ENSTMTG00000001480)	SMAD7 (ENSTMTG00000001490)	ENSTMTG00000001494	DYM (ENSTMTG00000001505)	C18orf32 (ENSTMTG00000001516)	ENSTMTG00000001521	LIPG (ENSTMTG00000001568)	ACAA2 (ENSTMTG00000001632)	MYO5B (ENSTMTG00000001656)	ENSTMTG00000001691
Testudinidae	ANCESTRAL SPECIES	30	ENSGT00940000159026	ENSGT00940000158784	ENSGT00390000018729.a.c.a	ENSGT00390000018729.a.c.b	ENSGT00390000018729.a.d	ENSGT01080000257333.E.n	ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b	ENSGT01030000235140	ENSGT00940000164634
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005006281	ENSGEVG00005006248	ENSGEVG00005020179	ENSGEVG00005020174	EPG5 (ENSGEVG00005020148)	PSTPIP2 (ENSGEVG00005020128)	ATP5F1A (ENSGEVG00005020124)	ENSGEVG00005020123	HAUS1 (ENSGEVG00005020111)	C18orf25 (ENSGEVG00005020108)	ENSGEVG00005020105	LOXHD1 (ENSGEVG00005020075)	ST8SIA5 (ENSGEVG00005020035)	ENSGEVG00005019963	PIAS2 (ENSGEVG00005019940)	KATNAL2 (ENSGEVG00005019929) #22	HDHD2 (ENSGEVG00005019914) #24	IER3IP1 (ENSGEVG00005019910) #23	SKOR2 (ENSGEVG00005019904) #25	SMAD2 (ENSGEVG00005019888)	ENSGEVG00005019880	ZBTB7C (ENSGEVG00005019877)	ENSGEVG00005019871	CTIF (ENSGEVG00005019849)	SMAD7 (ENSGEVG00005019841)	DYM (ENSGEVG00005019836)	C18orf32 (ENSGEVG00005019829)	ENSGEVG00005019793	LIPG (ENSGEVG00005019740)	ACAA2 (ENSGEVG00005019715)	MYO5B (ENSGEVG00005019665)
Abingdon island giant tortoise	MODERN SPECIES	2042													ST8SIA5 (ENSCABG00000020667)	ENSCABG00000020668	PIAS2 (ENSCABG00000020669)	KATNAL2 (ENSCABG00000020670) #22	HDHD2 (ENSCABG00000020673) #24	IER3IP1 (ENSCABG00000020676) #23	SMAD2 (ENSCABG00000020680)	ZBTB7C (ENSCABG00000020683)
Chinese turtle	MODERN SPECIES	2138	RIT2 (ENSPSIG00000012276)	SYT4 (ENSPSIG00000012268)	SETBP1 (ENSPSIG00000012250)	ENSPSIG00000012220	ENSPSIG00000011549	ENSPSIG00000011149	EPG5 (ENSPSIG00000010110)	PSTPIP2 (ENSPSIG00000009919)	ATP5F1A (ENSPSIG00000009091)	HAUS1 (ENSPSIG00000009054)	C18orf25 (ENSPSIG00000009048)	RNF165 (ENSPSIG00000008948)	ENSPSIG00000008936	ST8SIA5 (ENSPSIG00000007901)	PIAS2 (ENSPSIG00000007898)	KATNAL2 (ENSPSIG00000007746) #22	HDHD2 (ENSPSIG00000007538) #24	SMAD2 (ENSPSIG00000006646)	ZBTB7C (ENSPSIG00000006571)	ENSPSIG00000000589	ENSPSIG00000006540	ENSPSIG00000006516	CTIF (ENSPSIG00000006508)	SMAD7 (ENSPSIG00000006254)	DYM (ENSPSIG00000005625)	C18orf32 (ENSPSIG00000005560)	ENSPSIG00000005516	LIPG (ENSPSIG00000005431)	ACAA2 (ENSPSIG00000005335)	MYO5B (ENSPSIG00000005153)	ENSPSIG00000017286
Anura	ANCESTRAL SPECIES	158						ENSGT00390000007354	ENSGT00940000158788	ENSGT00550000074846	ENSGT00390000006029	ENSGT00940000161143	ENSGT00390000016167	ENSGT00940000156997	ENSGT00390000018830	ENSGT01030000234535.C	ENSGT01030000234539.a.a.b.b	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.b	ENSGT00940000159394	ENSGT01030000234626.D	ENSGT00940000155402.a.b
Frog	MODERN SPECIES		setbp1 (ENSXETG00000008160)	slc14a2 (ENSXETG00000047568)	ENSXETG00000031297	st8sia5 (ENSXETG00000039548)	loxhd1 (ENSXETG00000030605)	rnf165 (ENSXETG00000036743)	c18orf25 (ENSXETG00000021498)	fdx2 (ENSXETG00000021499)	haus1 (ENSXETG00000021500)	atp5f1a (ENSXETG00000002315)	PSTPIP2 (ENSXETG00000033294)	ENSXETG00000049379	epg5 (ENSXETG00000032699)	eef2.2 (ENSXETG00000021508)	pias2 (ENSXETG00000021519)	katnal2 (ENSXETG00000033325) #22	hdhd2 (ENSXETG00000020183) #24	ier3ip1 (ENSXETG00000046485) #23	ENSXETG00000038874 #25	ENSXETG00000045677	smad2 (ENSXETG00000020292)	zbtb7c (ENSXETG00000035017)	rpl17 (ENSXETG00000020308)	c18orf32 (ENSXETG00000026840)	dym (ENSXETG00000020310)	smad7 (ENSXETG00000020317)	ctif (ENSXETG00000026836)	tor4a (ENSXETG00000020322)	ENSXETG00000047713	ENSXETG00000047825	myo5b (ENSXETG00000020323)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000003993	ENSLLEG00000003997	ENSLLEG00000004000	ENSLLEG00000004037	HAUS1 (ENSLLEG00000004094)	FDX2 (ENSLLEG00000004099)	C18orf25 (ENSLLEG00000004107)	RNF165 (ENSLLEG00000004111)	LOXHD1 (ENSLLEG00000004123)	ST8SIA5 (ENSLLEG00000004139)	ENSLLEG00000004145	ENSLLEG00000004148	ENSLLEG00000004153	ENSLLEG00000004182	PIAS2 (ENSLLEG00000004193)	KATNAL2 (ENSLLEG00000004217) #22	HDHD2 (ENSLLEG00000004239) #24	IER3IP1 (ENSLLEG00000004247) #23	SKOR2 (ENSLLEG00000004251) #25	SMAD2 (ENSLLEG00000004265)	ZBTB7C (ENSLLEG00000004273)	CTIF (ENSLLEG00000004281)	ENSLLEG00000004298	ENSLLEG00000004306	ENSLLEG00000004310	ENSLLEG00000004313	DYM (ENSLLEG00000004334)	ENSLLEG00000004369	ENSLLEG00000004373	ENSLLEG00000004377	C18orf32 (ENSLLEG00000004379)
Coelacanth	MODERN SPECIES	1154														ENSLACG00000012779	vcp (ENSLACG00000012271)	KATNAL2 (ENSLACG00000010817) #22	HDHD2 (ENSLACG00000010509) #24	IER3IP1 (ENSLACG00000009917) #23	SKOR2 (ENSLACG00000008851) #25
Actinopterygii	ANCESTRAL SPECIES	178				ENSGT00940000155855	ENSGT01030000234518.B.a.a	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00960000187050	ENSGT00940000157400	ENSGT00390000003050	ENSGT00940000160904	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00940000159814	ENSGT00940000178986	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00390000018741	ENSGT00950000183010.a.a.b
Neopterygii	ANCESTRAL SPECIES	174	ENSGT00940000154822.b	ENSGT00900000141033.a	ENSGT00940000161917	ENSGT00940000154929.A	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT01100000263557.A.b.a.b.b	ENSGT00390000002865	ENSGT01030000234528.B.a.b	ENSGT00390000003050	ENSGT00940000160904	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.a	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000157438	ENSGT00390000015757	ENSGT00940000164013
Osteoglossocephalai	ANCESTRAL SPECIES	11	ENSGT00390000006366	ENSGT00940000158994	ENSGT00940000161837.c.b	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000162544.c.b	ENSGT00390000008853	ENSGT00940000167241	ENSGT00940000162544.c.a	ENSGT00390000006975	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d	ENSGT00390000015757
Osteoglossiformes	ANCESTRAL SPECIES	53	ENSGT00940000155101.e	ENSGT00390000001777	ENSGT00950000183174.A	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050.a	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648 #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a.l	ENSGT00940000167241	ENSGT00940000178030	ENSGT00940000162544.c.a	ENSGT00390000006975.i	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d	ENSGT00390000015757	ENSGT00940000164013
Asian bonytongue	MODERN SPECIES	21	pitpnb (ENSSFOG00015017744)	MN1 (ENSSFOG00015017775)	NAA25 (ENSSFOG00015017785)	PLPPR1 (ENSSFOG00015017856)	GRIN3A (ENSSFOG00015017869)	ENSSFOG00015017889	lpar1 (ENSSFOG00015017919)	MUSK (ENSSFOG00015017924)	rassf6 (ENSSFOG00015017954)	si:busm1-57f23.1 (ENSSFOG00015028130)	tmem267 (ENSSFOG00015017982)	ENSSFOG00015018015	cntfr (ENSSFOG00015018038)	galt (ENSSFOG00015018081)	sigmar1 (ENSSFOG00015018122)	katnal2 (ENSSFOG00015027723) #22	hdhd2 (ENSSFOG00015018148) #24	ier3ip1 (ENSSFOG00015018167) #23	skor2 (ENSSFOG00015018183) #25	smad2 (ENSSFOG00015018212)	ENSSFOG00015026623	ENSSFOG00015018321	cldn23.1 (ENSSFOG00015018631)	ENSSFOG00015029427	spp1 (ENSSFOG00015018649)	ENSSFOG00015018674	vldlr (ENSSFOG00015018725)	KCNV2 (ENSSFOG00015018759)	pum3 (ENSSFOG00015018778)	ENSSFOG00015018872	ENSSFOG00015027919
P. kingsleyae	MODERN SPECIES	9	MN1 (ENSPKIG00000023418)	NAA25 (ENSPKIG00000023372)	PLPPR1 (ENSPKIG00000023329)	GRIN3A (ENSPKIG00000023292)	ENSPKIG00000023272	ENSPKIG00000023258	lpar1 (ENSPKIG00000023252)	MUSK (ENSPKIG00000023201)	rassf6 (ENSPKIG00000023173)	si:busm1-57f23.1 (ENSPKIG00000023163)	ENSPKIG00000023130	ENSPKIG00000023113	cntfr (ENSPKIG00000023063)	galt (ENSPKIG00000022988)	sigmar1 (ENSPKIG00000022940)	katnal2 (ENSPKIG00000022906) #22	hdhd2 (ENSPKIG00000022879) #24	ier3ip1 (ENSPKIG00000022861) #23	skor2 (ENSPKIG00000022834) #25	smad2 (ENSPKIG00000022774)	ENSPKIG00000022711	ENSPKIG00000022689	ENSPKIG00000022640	ENSPKIG00000022611	ENSPKIG00000022596	ENSPKIG00000022590	ENSPKIG00000022534	ENSPKIG00000022483	ENSPKIG00000022469	ENSPKIG00000022451	SH3BP2 (ENSPKIG00000022417)
Clupeocephala	ANCESTRAL SPECIES	54	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000161837.c.b	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT01030000236317	ENSGT00940000175982	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000162544.c.b	ENSGT00390000008853	ENSGT00940000167241	ENSGT00940000162544.d	ENSGT00940000164512.d	ENSGT00940000162544.c.a	ENSGT00390000006975	ENSGT01030000235199	ENSGT00400000024390
Otomorpha	ANCESTRAL SPECIES	28	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT01030000236317	ENSGT00940000175982	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000177756	ENSGT00940000162544.c.a	ENSGT00390000006975.h	ENSGT00390000006975.g	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d
Clupeiformes	ANCESTRAL SPECIES	131	ENSGT00390000006366	ENSGT00940000158994	ENSGT00940000161837.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a
Atlantic herring	MODERN SPECIES	3	ENSCHAG00000001677	prnpb (ENSCHAG00000001684)	ENSCHAG00000001727	LETM2 (ENSCHAG00000001775)	NSD3 (ENSCHAG00000001902)	plpp5 (ENSCHAG00000004777)	ENSCHAG00000004798	ENSCHAG00000004813	ENSCHAG00000004851	ENSCHAG00000004864	ENSCHAG00000004877	loxl2a (ENSCHAG00000004948)	ENSCHAG00000005688	ENSCHAG00000005704	sigmar1 (ENSCHAG00000005904)	katnal2 (ENSCHAG00000005941) #22	hdhd2 (ENSCHAG00000006516) #24	ier3ip1 (ENSCHAG00000006553) #23	skor2 (ENSCHAG00000006617) #25	galt (ENSCHAG00000006639)	ENSCHAG00000006824	cntfr (ENSCHAG00000006855)	ENSCHAG00000006865	tmem267 (ENSCHAG00000006879)	ENSCHAG00000006906	si:busm1-57f23.1 (ENSCHAG00000006917)	rassf6 (ENSCHAG00000006925)	MUSK (ENSCHAG00000006960)	lpar1 (ENSCHAG00000007399)	ENSCHAG00000007448	HSPA12B (ENSCHAG00000007472)
Denticle herring	MODERN SPECIES	13	SLC46A2 (ENSDCDG00000016268)	ENSDCDG00000016277	PLPPR1 (ENSDCDG00000016284)	GRIN3A (ENSDCDG00000016296)	ENSDCDG00000016320	lpar1 (ENSDCDG00000016829)	MUSK (ENSDCDG00000016840)	rassf6 (ENSDCDG00000016858)	si:busm1-57f23.1 (ENSDCDG00000016864)	tmem267 (ENSDCDG00000016868)	ENSDCDG00000016869	cntfr (ENSDCDG00000016870)	ENSDCDG00000016873	galt (ENSDCDG00000016876)	sigmar1 (ENSDCDG00000016882)	katnal2 (ENSDCDG00000016887) #22	hdhd2 (ENSDCDG00000016896) #24	ier3ip1 (ENSDCDG00000016897) #23	skor2 (ENSDCDG00000016900) #25	smad2 (ENSDCDG00000016902)	ENSDCDG00000016929	ENSDCDG00000016933	loxl2a (ENSDCDG00000016948)	ENSDCDG00000017190	ENSDCDG00000017192	ENSDCDG00000017202	plpp5 (ENSDCDG00000017205)	NSD3 (ENSDCDG00000017236)	LETM2 (ENSDCDG00000018106)	ENSDCDG00000018116	prnpb (ENSDCDG00000018146)
Otophysi	ANCESTRAL SPECIES	17	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT01030000236317	ENSGT00940000175982	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000177756	ENSGT00940000162544.c.a	ENSGT00390000006975.h	ENSGT00390000006975.g	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d
Characiphysae	ANCESTRAL SPECIES	40	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000162544.c.a	ENSGT00390000006975.h	ENSGT00390000006975.g.a	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d	ENSGT00390000015757	ENSGT00940000164013	ENSGT00940000156639.d
Channel catfish	MODERN SPECIES	7	SLC46A2 (ENSIPUG00000024922)	ENSIPUG00000024917	ENSIPUG00000024914	lppr1 (ENSIPUG00000024909)	GRIN3A (ENSIPUG00000024907)	epha5 (ENSIPUG00000024902)	Lpar1 (ENSIPUG00000024901)	MUSK (ENSIPUG00000024897)	rassf6 (ENSIPUG00000024892)	si:busm1-57f23.1 (ENSIPUG00000024895)	tmem267 (ENSIPUG00000024890)	IL11RA (ENSIPUG00000024886)	cntfr (ENSIPUG00000024885)	galt (ENSIPUG00000024875)	sigmar1 (ENSIPUG00000024867)	katnal2 (ENSIPUG00000024858) #22	hdhd2 (ENSIPUG00000024849) #24	ENSIPUG00000024847	ier3ip1 (ENSIPUG00000024846) #23	skor2 (ENSIPUG00000024843) #25	SMAD2 (ENSIPUG00000024838)	ENSIPUG00000024836	ENSIPUG00000024835	ENSIPUG00000024830	cldn23.1 (ENSIPUG00000024815)	ENSIPUG00000024814	sh3bp2 (ENSIPUG00000024812)	vldlr (ENSIPUG00000024806)	KCNV2 (ENSIPUG00000024805)	pum3 (ENSIPUG00000024801)	carm1l (ENSIPUG00000024779)
Characiphysae_b	ANCESTRAL SPECIES	36	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000162544.c.a	ENSGT00390000006975.h	ENSGT00390000006975.g.a.b	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d	ENSGT00390000015757	ENSGT00940000164013	ENSGT00940000156639.d
Characoidei	ANCESTRAL SPECIES	29	ENSGT00940000158994	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000177756	ENSGT00940000162544.d	ENSGT00940000162544.c.a	ENSGT00390000006975.h	ENSGT00390000006975.g.a.b	ENSGT01030000235199	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d	ENSGT00390000015757
Mexicana tetra	MODERN SPECIES	12	ENSAMXG00000033093	PLPPR1 (ENSAMXG00000021269)	GRIN3A (ENSAMXG00000021254)	ENSAMXG00000021204	lpar1 (ENSAMXG00000040288)	MUSK (ENSAMXG00000039697)	ENSAMXG00000034657	ENSAMXG00000033560	rassf6 (ENSAMXG00000041828)	si:busm1-57f23.1 (ENSAMXG00000029050)	tmem267 (ENSAMXG00000029260)	ENSAMXG00000009780	cntfr (ENSAMXG00000009796)	galt (ENSAMXG00000009803)	sigmar1 (ENSAMXG00000009814)	katnal2 (ENSAMXG00000009836) #22	hdhd2 (ENSAMXG00000033439) #24	ier3ip1 (ENSAMXG00000036696) #23	skor2 (ENSAMXG00000009891) #25	smad2 (ENSAMXG00000033654)	ENSAMXG00000009925	ENSAMXG00000033990	ENSAMXG00000009947	cldn23.1 (ENSAMXG00000035759)	ENSAMXG00000041239	ENSAMXG00000041283	spp1 (ENSAMXG00000020994)	ENSAMXG00000020975	vldlr (ENSAMXG00000020944)	KCNV2 (ENSAMXG00000020918)	pum3 (ENSAMXG00000020911)
Red-bellied piranha	MODERN SPECIES	66					ENSPNAG00000027941	lpar1 (ENSPNAG00000027815)	MUSK (ENSPNAG00000027797)	rassf6 (ENSPNAG00000027662)	si:busm1-57f23.1 (ENSPNAG00000006486)	tmem267 (ENSPNAG00000027589)	ENSPNAG00000027577	cntfr (ENSPNAG00000027556)	ENSPNAG00000005900	galt (ENSPNAG00000006377)	sigmar1 (ENSPNAG00000006669)	katnal2 (ENSPNAG00000027423) #22	hdhd2 (ENSPNAG00000027220) #24	ier3ip1 (ENSPNAG00000027196) #23	skor2 (ENSPNAG00000027179) #25	smad2 (ENSPNAG00000027151)	ENSPNAG00000027063	ENSPNAG00000027049	ENSPNAG00000005608	ENSPNAG00000026996	ENSPNAG00000026976	cldn23.1 (ENSPNAG00000026896)	CLDN23 (ENSPNAG00000026880)	ENSPNAG00000026848	spp1 (ENSPNAG00000004966)	ENSPNAG00000026805	vldlr (ENSPNAG00000026791)
Electric eel	MODERN SPECIES	891														galt (ENSEEEG00000018969)	sigmar1 (ENSEEEG00000018966)	katnal2 (ENSEEEG00000018962) #22	hdhd2 (ENSEEEG00000018959) #24	ier3ip1 (ENSEEEG00000018957) #23	skor2 (ENSEEEG00000018955) #25	smad2 (ENSEEEG00000018934)	ENSEEEG00000018933	ENSEEEG00000018932	ENSEEEG00000018931
Cyprinoidei	ANCESTRAL SPECIES	84	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a.d	ENSGT00940000161837.c.a.c.a	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864.k.a	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT01030000236317	ENSGT00940000175982	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.a	ENSGT00940000177756	ENSGT00940000162544.c.a	ENSGT00390000006975.h	ENSGT00390000006975.g	ENSGT01030000235199	ENSGT00400000024390	ENSGT00980000203321	ENSGT00390000002216	ENSGT00940000155460
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	408	ENSGT00940000158994.f	ENSGT00950000183096.a.b.q.b	ENSGT00940000161837.c.a.d	ENSGT00940000158875.g	ENSGT00940000158571.g.a	ENSGT00940000163892.C.a.b.c	ENSGT01050000244941.A.l	ENSGT00940000158226.j.a	ENSGT00940000159886.d	ENSGT00390000009872.a	ENSGT00390000003050	ENSGT00940000165521.a.a.a	ENSGT00940000158864.k.a.a.a	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302.a #22	ENSGT00940000155805 #24	ENSGT00510000047648.a.c #23	ENSGT00940000160474.d.a.a #25	ENSGT00940000153499.b.a.a	ENSGT00940000175982	ENSGT00510000047648.a.d #23	ENSGT00940000160474.d.a.b #25	ENSGT00940000153499.b.a.b	ENSGT00390000006975.g.c	ENSGT01030000235199.a	ENSGT00940000181051
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1345														galt (ENSCARG00000037425)	sigmar1 (ENSCARG00000037398)	katnal2 (ENSCARG00000037240) #22	hdhd2 (ENSCARG00000037178) #24	ier3ip1 (ENSCARG00000037115) #23	skor2 (ENSCARG00000037094) #25
Goldfish	MODERN SPECIES	1	ENSCARG00000023603	ENSCARG00000023725	nrg1 (ENSCARG00000026983)	WRN (ENSCARG00000027274)	PURG (ENSCARG00000029447)	ENSCARG00000029463	ppp2cb (ENSCARG00000029483)	ubxn8 (ENSCARG00000029505)	hint1 (ENSCARG00000029519)	chsy3 (ENSCARG00000029537)	ENSCARG00000029554	ENSCARG00000029562	cntfr (ENSCARG00000029572)	il21 (ENSCARG00000029620)	ENSCARG00000029635	katnal2 (ENSCARG00000029666) #22	hdhd2 (ENSCARG00000029712) #24	ier3ip1 (ENSCARG00000029723) #23	skor2 (ENSCARG00000029735) #25	smad2 (ENSCARG00000029739)	ENSCARG00000029754	macir (ENSCARG00000029818)	chd1 (ENSCARG00000029856)	reep5 (ENSCARG00000030112)	dcp2 (ENSCARG00000030205)	ENSCARG00000030221	zgc:114200 (ENSCARG00000030227)	tpm2 (ENSCARG00000030269)	tln1 (ENSCARG00000031215)	hmgcs1 (ENSCARG00000032343)	MAP3K1 (ENSCARG00000032440)
Cyprininae_a	ANCESTRAL SPECIES	265				ENSGT00940000163892.C.a.b.c	ENSGT01050000244941.A.l	ENSGT00940000158226.j.a	ENSGT00940000159886.d	ENSGT00390000009872.a	ENSGT00390000003050	ENSGT00940000165521.a.b	ENSGT00940000158864.k.a.a.b	ENSGT00940000165521.a.a.b	ENSGT00940000158864.k.b	ENSGT00390000016188	ENSGT00390000012082.d	ENSGT00940000157302.a #22	ENSGT00390000012082.c	ENSGT00940000157302.b #22	ENSGT00940000155805.i #24	ENSGT00510000047648.a.c #23	ENSGT00940000160474.d.a.a #25	ENSGT00940000155805.j #24	ENSGT00940000175982	ENSGT00510000047648.a.d #23	ENSGT00940000160474.d.a.b #25	ENSGT00940000153499.b.a.b	ENSGT00390000006975.g.c	ENSGT01030000235199.a	ENSGT00400000024390.b	ENSGT00390000002216.f	ENSGT00990000210561
Common carp reference	MODERN SPECIES	24	ENSCCRG00000066975	ENSCCRG00000053999	ENSCCRG00000058040	ENSCCRG00000065669	ENSCCRG00000077456	lpar1 (ENSCCRG00000072551)	ENSCCRG00000009062	si:busm1-57f23.1 (ENSCCRG00000070997)	ENSCCRG00000082486	ENSCCRG00000070926	ENSCCRG00000070953	ENSCCRG00000058891	ENSCCRG00000040304	galt (ENSCCRG00000056065)	sigmar1 (ENSCCRG00000034373)	katnal2 (ENSCCRG00000034384) #22	hdhd2 (ENSCCRG00000081536) #24	ier3ip1 (ENSCCRG00000006551) #23	skor2 (ENSCCRG00000057797) #25	smad2 (ENSCCRG00000053483)	ENSCCRG00000061104	spp1 (ENSCCRG00000032025)	vldlr (ENSCCRG00000002363)	ENSCCRG00000060136	pum3 (ENSCCRG00000055726)	trappc13 (ENSCCRG00000073745)	sgtb (ENSCCRG00000057210)	nln (ENSCCRG00000004075)	erbin (ENSCCRG00000038937)	smc5 (ENSCCRG00000039596)	ENSCCRG00000047761
Golden-line barbel	MODERN SPECIES	653															sigmar1 (ENSSGRG00000018986)	katnal2 (ENSSGRG00000018879) #22	hdhd2 (ENSSGRG00000018852) #24	ier3ip1 (ENSSGRG00000018851) #23	skor2 (ENSSGRG00000018850) #25	smad2 (ENSSGRG00000018296)	ENSSGRG00000018290	cldn23.1 (ENSSGRG00000018287)	CLDN23 (ENSSGRG00000018286)	ENSSGRG00000018283	ENSSGRG00000018282	spp1 (ENSSGRG00000018279)	ENSSGRG00000018278	vldlr (ENSSGRG00000015016)	KCNV2 (ENSSGRG00000014986)	pum3 (ENSSGRG00000014889)	trappc13 (ENSSGRG00000014840)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000157302.b #22
Cyprininae_a	ANCESTRAL SPECIES	265		ENSGT00940000163892.C.a.b.c	ENSGT01050000244941.A.l	ENSGT00940000158226.j.a	ENSGT00940000159886.d	ENSGT00390000009872.a	ENSGT00390000003050	ENSGT00940000165521.a.b	ENSGT00940000158864.k.a.a.b	ENSGT00940000165521.a.a.b	ENSGT00940000158864.k.b	ENSGT00390000016188	ENSGT00390000012082.d	ENSGT00940000157302.a #22	ENSGT00390000012082.c	ENSGT00940000157302.b #22	ENSGT00940000155805.i #24	ENSGT00510000047648.a.c #23	ENSGT00940000160474.d.a.a #25	ENSGT00940000155805.j #24	ENSGT00940000175982	ENSGT00510000047648.a.d #23	ENSGT00940000160474.d.a.b #25	ENSGT00940000153499.b.a.b	ENSGT00390000006975.g.c	ENSGT01030000235199.a	ENSGT00400000024390.b	ENSGT00390000002216.f	ENSGT00990000210561	ENSGT00940000155460.c	ENSGT00390000015757.`b
Golden-line barbel	MODERN SPECIES	1841															sigmar1 (ENSSGRG00000030123)	katnal2 (ENSSGRG00000030122) #22	hdhd2 (ENSSGRG00000030121) #24	ENSSGRG00000030120	skor2 (ENSSGRG00000030119) #25
Zebrafish	MODERN SPECIES	1	ADAMTS6 (ENSDARG00000041982)	ppwd1 (ENSDARG00000063161)	trim23 (ENSDARG00000069420)	ENSDARG00000058284	ENSDARG00000104560	lpar1 (ENSDARG00000099840)	musk (ENSDARG00000098764)	rassf6 (ENSDARG00000000804)	si:busm1-57f23.1 (ENSDARG00000074425)	tmem267 (ENSDARG00000000142)	ENSDARG00000026736	cntfr (ENSDARG00000028661)	ENSDARG00000095502	galt (ENSDARG00000069543)	sigmar1 (ENSDARG00000011418)	katnal2 (ENSDARG00000012275) #22	hdhd2 (ENSDARG00000024728) #24	ier3ip1 (ENSDARG00000039601) #23	skor2 (ENSDARG00000063614) #25	smad2 (ENSDARG00000006389)	ENSDARG00000095137	ENSDARG00000092525	ENSDARG00000094055	ENSDARG00000094850	cldn23.1 (ENSDARG00000028096)	CLDN23 (ENSDARG00000103703)	ENSDARG00000114063	ENSDARG00000092580	scpp8 (ENSDARG00000093124)	spp1 (ENSDARG00000044276)	ENSDARG00000113306
Euteleosteomorpha	ANCESTRAL SPECIES	27	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000161837.c.b	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c
Protacanthopterygii	ANCESTRAL SPECIES	57	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000161837.c.b	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c
Salmoninae	ANCESTRAL SPECIES	454	ENSGT00950000183096.a.b.n	ENSGT00940000161837.c.a.b	ENSGT00940000161837.c.b.b	ENSGT00940000158875.j	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00940000160474.b #25
Huchen	MODERN SPECIES	7754																ENSHHUG00000018506 #22
Salmoninae_a	ANCESTRAL SPECIES	123	ENSGT00940000161837.c.a.b	ENSGT00940000161837.c.b.b	ENSGT00940000158875.j	ENSGT00940000158571.i	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a.c	ENSGT00390000003050	ENSGT00940000165521.a.d	ENSGT00940000158864.i.b	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00940000160474.b #25
Oncorhynchus	ANCESTRAL SPECIES	183														ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00940000160474.b.c #25	ENSGT00940000158864.i.b	ENSGT00940000165521.a.d	ENSGT00390000003050
Rainbow trout	MODERN SPECIES	3														galt (ENSOMYG00000005968)	sigmar1 (ENSOMYG00000005828)	katnal2 (ENSOMYG00000065578) #22	hdhd2 (ENSOMYG00000005779) #24	skor2 (ENSOMYG00000059761) #25	ENSOMYG00000009895	ENSOMYG00000009881	ENSOMYG00000076084	ENSOMYG00000070940	ENSOMYG00000056532	ENSOMYG00000009943	ENSOMYG00000009995	ENSOMYG00000068004	ENSOMYG00000048046	ENSOMYG00000071656	ENSOMYG00000057588	ENSOMYG00000005485	ENSOMYG00000005513
Oncorhynchus_a	ANCESTRAL SPECIES	48														ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00940000160474.b.c #25	ENSGT00940000158864.i.b	ENSGT00940000165521.a.d	ENSGT00390000003050	ENSGT01050000244941.A.h	ENSGT00940000163892.C.a.b	ENSGT00940000158571.i	ENSGT00940000158875.j	ENSGT00940000161837.c.b.a.a.a	ENSGT00940000161837.c.a.a	ENSGT00950000183096.a.b.m	ENSGT00940000158994.g	ENSGT00390000006366.c.b	ENSGT00940000156729
Coho salmon	MODERN SPECIES	26												ENSOKIG00005000213 #25	galt (ENSOKIG00005000265)	ENSOKIG00005000320	sigmar1 (ENSOKIG00005000326)	katnal2 (ENSOKIG00005000331) #22	hdhd2 (ENSOKIG00005000337) #24	ENSOKIG00005000345	cntfr (ENSOKIG00005000350)	ENSOKIG00005000361	tmem267 (ENSOKIG00005000369)	lpar1 (ENSOKIG00005000374)	ENSOKIG00005000440	GRIN3A (ENSOKIG00005000488)	ENSOKIG00005000495	PLPPR1 (ENSOKIG00005000503)	ENSOKIG00005000526	ENSOKIG00005000543	MGAT3 (ENSOKIG00005000553)	ENSOKIG00005000566	SLC46A2 (ENSOKIG00005000576)
Salmo	ANCESTRAL SPECIES		ENSGT01050000244924.a.a.a.n	ENSGT00390000006366.c.a	ENSGT00940000158994.h	ENSGT00950000183096.a.b.n	ENSGT00940000161837.c.a.b	ENSGT00940000158875.i	ENSGT00940000158571.j	ENSGT01050000244941.A.e	ENSGT00940000158226.f	ENSGT00940000159886	ENSGT00390000009872	ENSGT00390000003050	ENSGT00940000165521.a.d	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00940000160474.b #25
River trout	MODERN SPECIES	640														galt (ENSSTUG00000034090)	sigmar1 (ENSSTUG00000034185)	katnal2 (ENSSTUG00000034196) #22	hdhd2 (ENSSTUG00000034262) #24	skor2 (ENSSTUG00000034276) #25	ENSSTUG00000034293	ENSSTUG00000034304	cntfr (ENSSTUG00000034315)	ENSSTUG00000034324
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000072576	ENSSSAG00000097210	ENSSSAG00000098944	ENSSSAG00000117484	ENSSSAG00000004921	tmem267 (ENSSSAG00000113226)	ENSSSAG00000100345	ENSSSAG00000004944	ENSSSAG00000102160	cntfr (ENSSSAG00000096970)	ENSSSAG00000097248	ENSSSAG00000089414	galt (ENSSSAG00000004348)	sigmar1 (ENSSSAG00000106164)	ENSSSAG00000106861	katnal2 (ENSSSAG00000004496) #22	ENSSSAG00000101812	hdhd2 (ENSSSAG00000004861) #24	skor2 (ENSSSAG00000004880) #25	ENSSSAG00000109692	ENSSSAG00000004913	ENSSSAG00000082951
Northern pike	MODERN SPECIES	22	PLPPR1 (ENSELUG00000013637)	GRIN3A (ENSELUG00000013574)	ENSELUG00000024755	ENSELUG00000032674	ENSELUG00000013529	lpar1 (ENSELUG00000013451)	MUSK (ENSELUG00000000493)	rassf6 (ENSELUG00000013400)	si:busm1-57f23.1 (ENSELUG00000013372)	tmem267 (ENSELUG00000013346)	ENSELUG00000013333	ENSELUG00000005649	cntfr (ENSELUG00000013317)	galt (ENSELUG00000013301)	sigmar1 (ENSELUG00000030560)	katnal2 (ENSELUG00000013258) #22	hdhd2 (ENSELUG00000000478) #24	ier3ip1 (ENSELUG00000034693) #23	skor2 (ENSELUG00000013092) #25	ENSELUG00000012992	cldn23.1 (ENSELUG00000012895)
Acanthomorphata	ANCESTRAL SPECIES	146	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000161837.c.b	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c
Euacanthomorphacea	ANCESTRAL SPECIES	83	ENSGT00950000183096.a.b	ENSGT00940000161837.c.a	ENSGT00940000161837.c.b	ENSGT00940000158875	ENSGT00940000158571	ENSGT00940000163892.C.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b
Percomorphaceae	ANCESTRAL SPECIES	16							ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Tiger tail seahorse	MODERN SPECIES	230								MUSK (ENSHCOG00000006098)	rassf6 (ENSHCOG00000006128)	si:busm1-57f23.1 (ENSHCOG00000006132)	ENSHCOG00000006144	tmem267 (ENSHCOG00000006153)	cntfr (ENSHCOG00000006229)	galt (ENSHCOG00000006268)	sigmar1 (ENSHCOG00000006291)	katnal2 (ENSHCOG00000006556) #22	hdhd2 (ENSHCOG00000006602) #24	ier3ip1 (ENSHCOG00000006656) #23	skor2 (ENSHCOG00000006668) #25	ENSHCOG00000006720	ENSHCOG00000006731	ENSHCOG00000006774	ENSHCOG00000006807	PLPPR1 (ENSHCOG00000006858)	ENSHCOG00000006907	SLC46A2 (ENSHCOG00000006923)	snx30 (ENSHCOG00000000203)	inip (ENSHCOG00000006948)	ENSHCOG00000006969
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675.n	ENSGT00390000007731	ENSGT00940000165675.m	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675.n	ENSGT00670000098179.d.b	ENSGT00390000007731	ENSGT00940000165675.m	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b	ENSGT00940000154091.a.a.s.b
Turquoise killifish	MODERN SPECIES	1611	ENSNFUG00015020643	ENSNFUG00015019898	ENSNFUG00015019866	STBD1 (ENSNFUG00015019863)	ENSNFUG00015019793	ENSNFUG00015019789	lpar1 (ENSNFUG00015019784)	MUSK (ENSNFUG00015019754)	rassf6 (ENSNFUG00015019738)	cntfr (ENSNFUG00015019706)	ENSNFUG00015019699	ENSNFUG00015019697	ENSNFUG00015019690	ENSNFUG00015019687	SIGMAR1 (ENSNFUG00015019680)	katnal2 (ENSNFUG00015019373) #22	HDHD2 (ENSNFUG00015019363) #24	ier3ip1 (ENSNFUG00015019361) #23	skor2 (ENSNFUG00015019356) #25	Nfu_g_1_006304 (ENSNFUG00015019334)	ENSNFUG00015019331	ENSNFUG00015019327	ENSNFUG00015019323	ENSNFUG00015019320	ENSNFUG00015019318	ENSNFUG00015019316	ENSNFUG00015019102	ENSNFUG00015018738	stoml2 (ENSNFUG00015018719)	PIGO (ENSNFUG00015018703)	ENSNFUG00015018698
Mangrove rivulus	MODERN SPECIES	16	stoml2 (ENSKMAG00000016204)	UNC13B (ENSKMAG00000015758)	ENSKMAG00000015633	ENSKMAG00000015610	ENSKMAG00000015596	ENSKMAG00000015490	lpar1 (ENSKMAG00000015458)	MUSK (ENSKMAG00000015403)	rassf6 (ENSKMAG00000015365)	si:busm1-57f23.1 (ENSKMAG00000015342)	ENSKMAG00000015288	tmem267 (ENSKMAG00000015254)	cntfr (ENSKMAG00000015234)	galt (ENSKMAG00000015181)	sigmar1 (ENSKMAG00000015145)	katnal2 (ENSKMAG00000015114) #22	hdhd2 (ENSKMAG00000015086) #24	ier3ip1 (ENSKMAG00000015069) #23	skor2 (ENSKMAG00000015049) #25	ENSKMAG00000014998	ENSKMAG00000014979	ENSKMAG00000014964	ENSKMAG00000014948	ENSKMAG00000014881	ENSKMAG00000014806	GRIN3A (ENSKMAG00000014752)	PLPPR1 (ENSKMAG00000014724)	ENSKMAG00000014630	SLC46A2 (ENSKMAG00000014567)	snx30 (ENSKMAG00000014529)	inip (ENSKMAG00000014510)
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000159475.d	ENSGT00940000154885.A.e.a	ENSGT00940000155307.a.b.b	ENSGT00390000002865	ENSGT00390000007731	ENSGT00940000165675.m	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT01090000260059.a.b.b.a.a.a.a.b.a.a.a.b	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000155307.a.b.b	ENSGT00390000002865	ENSGT00670000098179.d.b.sb	ENSGT00390000007731	ENSGT00940000165675.m	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000176112	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.rb.a.b	ENSGT00670000098179.d.b.rb.a.a.a	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT01090000260059.a.b.b.a.a.a.a.b.a.a.a.b	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000179122	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157484	ENSGT00940000160540	ENSGT00550000074872	ENSGT00940000157199	ENSGT00940000157703.g	ENSGT00390000003837	ENSGT00390000009872.f	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.rb.a.b	ENSGT00670000098179.d.b.rb.b	ENSGT00670000098179.d.b.rb.a.a.a	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT01090000260059.a.b.b.a.a.a.a.b.a.a.a.b	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b
NAME_6	ANCESTRAL SPECIES	130										ENSGT00390000009872.f	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.rb.a.b	ENSGT00670000098179.d.b.rb.a.a.a	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT01090000260059.a.b.b.a.a.a.a.b.a.a.a.b	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a
Amazon molly	MODERN SPECIES	396													ENSPFOG00000023375	galt (ENSPFOG00000001755)	sigmar1 (ENSPFOG00000001941)	katnal2 (ENSPFOG00000002012) #22	hdhd2 (ENSPFOG00000002151) #24	ier3ip1 (ENSPFOG00000023361) #23	skor2 (ENSPFOG00000002242) #25	ENSPFOG00000002285	ENSPFOG00000020331	ENSPFOG00000020332	ENSPFOG00000002390	GRIN3A (ENSPFOG00000002891)	ENSPFOG00000020333	PLPPR1 (ENSPFOG00000003123)	ENSPFOG00000003217	SLC46A2 (ENSPFOG00000003320)	snx30 (ENSPFOG00000003420)	inip (ENSPFOG00000003562)	snx18b (ENSPFOG00000003569)
Sailfin molly	MODERN SPECIES	421													ENSPLAG00000020562	galt (ENSPLAG00000020550)	sigmar1 (ENSPLAG00000020522)	katnal2 (ENSPLAG00000020494) #22	hdhd2 (ENSPLAG00000020450) #24	ier3ip1 (ENSPLAG00000020401) #23	skor2 (ENSPLAG00000020365) #25
Guppy	MODERN SPECIES	442	auh (ENSPREG00000004438)	nfil3 (ENSPREG00000004462)	sptlc1 (ENSPREG00000004486)	ENSPREG00000004607	lmnb1 (ENSPREG00000004625)	ENSPREG00000004663	ENSPREG00000004688	ENSPREG00000004707	prrc1 (ENSPREG00000004724)	ENSPREG00000004737	ENSPREG00000004754	tmem267 (ENSPREG00000004770)	cntfr (ENSPREG00000004788)	galt (ENSPREG00000004795)	sigmar1 (ENSPREG00000004834)	katnal2 (ENSPREG00000004873) #22	hdhd2 (ENSPREG00000004931) #24	ier3ip1 (ENSPREG00000005092) #23	skor2 (ENSPREG00000005142) #25	ENSPREG00000005174	ENSPREG00000005201	ENSPREG00000005206	ENSPREG00000005242	GRIN3A (ENSPREG00000005322)	ENSPREG00000005355	PLPPR1 (ENSPREG00000005369)	ENSPREG00000005392	palm2akap2 (ENSPREG00000005422)	SLC46A2 (ENSPREG00000005458)	snx30 (ENSPREG00000005480)	inip (ENSPREG00000005504)
Platyfish	MODERN SPECIES	22	ENSXMAG00000021536	ENSXMAG00000006088	lpar1 (ENSXMAG00000006126)	MUSK (ENSXMAG00000004125)	ENSXMAG00000027233	si:busm1-57f23.1 (ENSXMAG00000024627)	rassf6 (ENSXMAG00000004159)	si:busm1-57f23.1 (ENSXMAG00000024574)	ENSXMAG00000004122	tmem267 (ENSXMAG00000004144)	cntfr (ENSXMAG00000025576)	ENSXMAG00000025249	galt (ENSXMAG00000002181)	sigmar1 (ENSXMAG00000021189)	ENSXMAG00000026151	katnal2 (ENSXMAG00000002201) #22	hdhd2 (ENSXMAG00000002205) #24	ier3ip1 (ENSXMAG00000028492) #23	skor2 (ENSXMAG00000026867) #25	ENSXMAG00000027438	ENSXMAG00000002220	ENSXMAG00000015194	ENSXMAG00000029441	ENSXMAG00000029400	ENSXMAG00000020992	ENSXMAG00000002222	ENSXMAG00000027439	ENSXMAG00000027292	GRIN3A (ENSXMAG00000002239)	PLPPR1 (ENSXMAG00000002242)	ENSXMAG00000002247
NAME_4	ANCESTRAL SPECIES	52	ENSGT00940000154885.A.e.a	ENSGT00940000155307.a.b.b	ENSGT00390000002865	ENSGT00670000098179.d.b	ENSGT00390000007731	ENSGT00940000165675.m	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b
Mummichog	MODERN SPECIES	2238	ENSFHEG00000005002	prkab1a (ENSFHEG00000005018)	PHF24 (ENSFHEG00000005027)	ENSFHEG00000005044	ENSFHEG00000005061	ENSFHEG00000005179	lpar1 (ENSFHEG00000005217)	MUSK (ENSFHEG00000005264)	rassf6 (ENSFHEG00000005305)	si:busm1-57f23.1 (ENSFHEG00000000833)	ENSFHEG00000005336	tmem267 (ENSFHEG00000005343)	cntfr (ENSFHEG00000005356)	galt (ENSFHEG00000005443)	sigmar1 (ENSFHEG00000005490)	katnal2 (ENSFHEG00000005508) #22	hdhd2 (ENSFHEG00000005535) #24	ier3ip1 (ENSFHEG00000005580) #23	skor2 (ENSFHEG00000000144) #25	ENSFHEG00000005614	ENSFHEG00000005631	ENSFHEG00000005643	ENSFHEG00000005664
Sheepshead minnow	MODERN SPECIES	894												slc35a5 (ENSCVAG00000002580)	ccdc80 (ENSCVAG00000002564)	galt (ENSCVAG00000002554)	sigmar1 (ENSCVAG00000002545)	katnal2 (ENSCVAG00000002538) #22	hdhd2 (ENSCVAG00000002528) #24	ier3ip1 (ENSCVAG00000002520) #23	skor2 (ENSCVAG00000002515) #25	ENSCVAG00000002509	ENSCVAG00000002497	fut7 (ENSCVAG00000002494)
Oryzias	ANCESTRAL SPECIES	9	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675.o	ENSGT00940000165675.p.a	ENSGT00390000007731	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000154929.A	ENSGT00940000165675.o	ENSGT00670000098179.d.b.vb	ENSGT00940000165675.p.a	ENSGT00390000007731	ENSGT00670000098179.d.b.wb.a.a.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.wb.a.b.a	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Indian medaka	MODERN SPECIES	30	ENSOMEG00000020043	ENSOMEG00000020056	ENSOMEG00000020076	ENSOMEG00000020109	ENSOMEG00000020120	ENSOMEG00000020129	lpar1 (ENSOMEG00000020137)	MUSK (ENSOMEG00000020142)	rassf6 (ENSOMEG00000020192)	si:busm1-57f23.1 (ENSOMEG00000020224)	ENSOMEG00000020333	tmem267 (ENSOMEG00000020361)	cntfr (ENSOMEG00000020444)	galt (ENSOMEG00000020533)	sigmar1 (ENSOMEG00000020573)	katnal2 (ENSOMEG00000020611) #22	hdhd2 (ENSOMEG00000020622) #24	ier3ip1 (ENSOMEG00000020656) #23	skor2 (ENSOMEG00000020689) #25	ENSOMEG00000020756	ENSOMEG00000020774	ENSOMEG00000020801	ENSOMEG00000020815	ENSOMEG00000020859	ENSOMEG00000020871	GRIN3A (ENSOMEG00000020948)	PLPPR1 (ENSOMEG00000020977)	ENSOMEG00000020994	ENSOMEG00000021034	palm2akap2 (ENSOMEG00000021064)	SLC46A2 (ENSOMEG00000021091)
Javanese ricefish	MODERN SPECIES	3	stoml2 (ENSOJAG00000021870)	ENSOJAG00000022125	ENSOJAG00000022747	ENSOJAG00000022945	ENSOJAG00000023150	ENSOJAG00000023159	lpar1 (ENSOJAG00000023163)	MUSK (ENSOJAG00000023172)	rassf6 (ENSOJAG00000023183)	ENSOJAG00000023191	ENSOJAG00000023196	tmem267 (ENSOJAG00000023201)	cntfr (ENSOJAG00000023209)	galt (ENSOJAG00000023246)	sigmar1 (ENSOJAG00000023286)	katnal2 (ENSOJAG00000023292) #22	hdhd2 (ENSOJAG00000023304) #24	ier3ip1 (ENSOJAG00000023317) #23	skor2 (ENSOJAG00000023320) #25	ENSOJAG00000023333	ENSOJAG00000005862	ENSOJAG00000005875	ENSOJAG00000006170	ENSOJAG00000008482	GRIN3A (ENSOJAG00000008499)	PLPPR1 (ENSOJAG00000008594)	ENSOJAG00000008625	SLC46A2 (ENSOJAG00000008664)	snx30 (ENSOJAG00000008681)	inip (ENSOJAG00000008704)	snx18b (ENSOJAG00000008724)
Oryzias_a	ANCESTRAL SPECIES	57	ENSGT01030000234614.A.l.a	ENSGT00940000165775.b	ENSGT00940000154929.A	ENSGT00940000165675.o	ENSGT00390000007731	ENSGT00940000165675.p.a	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000161021.b	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a
Chinese medaka	MODERN SPECIES	967				ENSOSIG00000009272	ENSOSIG00000005030	lpar1 (ENSOSIG00000004895)	MUSK (ENSOSIG00000004881)	rassf6 (ENSOSIG00000004865)	si:busm1-57f23.1 (ENSOSIG00000004852)	ENSOSIG00000004847	tmem267 (ENSOSIG00000004841)	ENSOSIG00000004839	cntfr (ENSOSIG00000004836)	galt (ENSOSIG00000023584)	sigmar1 (ENSOSIG00000023583)	katnal2 (ENSOSIG00000023582) #22	hdhd2 (ENSOSIG00000023580) #24	skor2 (ENSOSIG00000023576) #25	ENSOSIG00000023574	ENSOSIG00000023571	ENSOSIG00000023444
Japanese Medaka HdrR	MODERN SPECIES	3	ENSORLG00000018603	ENSORLG00000025461	ENSORLG00000012120	ENSORLG00000012115	ENSORLG00000030274	lpar1 (ENSORLG00000012111)	MUSK (ENSORLG00000012082)	rassf6 (ENSORLG00000012038)	si:busm1-57f23.1 (ENSORLG00000012002)	ENSORLG00000011994	ENSORLG00000029084	tmem267 (ENSORLG00000011984)	cntfr (ENSORLG00000029567)	galt (ENSORLG00000011924)	sigmar1 (ENSORLG00000011902)	katnal2 (ENSORLG00000011896) #22	ier3ip1 (ENSORLG00000024143) #23	hdhd2 (ENSORLG00000011885) #24	skor2 (ENSORLG00000011851) #25	ENSORLG00000026965	ENSORLG00000011834	ENSORLG00000011781	ENSORLG00000025342	ENSORLG00000023566	ENSORLG00000026144	ENSORLG00000023727	ENSORLG00000025507	ENSORLG00000025199	ENSORLG00000025566	ENSORLG00000025137	ENSORLG00000023766
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Cichlidae	ANCESTRAL SPECIES	10	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000175255	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00390000007731	ENSGT00940000165675.x	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000154929.A	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000165675.x	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Lyretail cichlid	MODERN SPECIES	328	UNC13B (ENSNBRG00000011243)	ENSNBRG00000011168	ENSNBRG00000011112	ENSNBRG00000011038	ENSNBRG00000011022	lpar1 (ENSNBRG00000011013)	MUSK (ENSNBRG00000010974)	rassf6 (ENSNBRG00000010943)	si:busm1-57f23.1 (ENSNBRG00000010930)	ENSNBRG00000010921	tmem267 (ENSNBRG00000010908)	cntfr (ENSNBRG00000010892)	ENSNBRG00000010869	galt (ENSNBRG00000010833)	sigmar1 (ENSNBRG00000010795)	katnal2 (ENSNBRG00000010733) #22	hdhd2 (ENSNBRG00000010691) #24	ier3ip1 (ENSNBRG00000010632) #23	skor2 (ENSNBRG00000010622) #25	ENSNBRG00000010587	ENSNBRG00000010565	ENSNBRG00000010512	ENSNBRG00000010490	ENSNBRG00000010441	PLPPR1 (ENSNBRG00000010422)	ENSNBRG00000010411	palm2akap2 (ENSNBRG00000010393)	SLC46A2 (ENSNBRG00000010376)	snx30 (ENSNBRG00000010343)	inip (ENSNBRG00000010323)	snx18b (ENSNBRG00000010311)
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000154929.A	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000165675.x	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Burton s mouthbrooder	MODERN SPECIES	1107														galt (ENSHBUG00000010526)	sigmar1 (ENSHBUG00000010570)	ENSHBUG00000010582 #22
Haplochromini_A	DUPLICATION
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000154929.A	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000165675.x	ENSGT00390000007731	ENSGT00670000098179.d.b.eb	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302.c #22	ENSGT00940000157302.d #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.db	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000154929.A	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000165675.x	ENSGT00390000007731	ENSGT00670000098179.d.b.eb.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302.c #22	ENSGT00940000157302.d #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.db	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a
Zebra mbuna	MODERN SPECIES	1110	UNC13B (ENSMZEG00005016059)	ENSMZEG00005016123	ENSMZEG00005016141	ENSMZEG00005016165	ENSMZEG00005016179	ENSMZEG00005016185	lpar1 (ENSMZEG00005016234)	MUSK (ENSMZEG00005016242)	rassf6 (ENSMZEG00005016261)	si:busm1-57f23.1 (ENSMZEG00005016271)	ENSMZEG00005016276	tmem267 (ENSMZEG00005016290)	cntfr (ENSMZEG00005016321)	galt (ENSMZEG00005016350)	sigmar1 (ENSMZEG00005016364)	katnal2 (ENSMZEG00005016377) #22	katnal2 (ENSMZEG00005016392) #22	hdhd2 (ENSMZEG00005016415) #24	ier3ip1 (ENSMZEG00005016424) #23	skor2 (ENSMZEG00005016435) #25	ENSMZEG00005016452	ENSMZEG00005016464	ENSMZEG00005016466	ENSMZEG00005016498	GRIN3A (ENSMZEG00005016546)	PLPPR1 (ENSMZEG00005016560)	ENSMZEG00005016584	SLC46A2 (ENSMZEG00005016602)	snx30 (ENSMZEG00005016614)	inip (ENSMZEG00005016622)	ENSMZEG00005016628
Eastern happy	MODERN SPECIES	19	lpar1 (ENSACLG00000025772)	MUSK (ENSACLG00000025743)	rassf6 (ENSACLG00000025728)	si:busm1-57f23.1 (ENSACLG00000025725)	ENSACLG00000025706	tmem267 (ENSACLG00000025698)	cntfr (ENSACLG00000025691)	ENSACLG00000025657	ENSACLG00000025646	ENSACLG00000025558	ENSACLG00000025542	ENSACLG00000025534	ENSACLG00000025525	galt (ENSACLG00000025465)	sigmar1 (ENSACLG00000025457)	katnal2 (ENSACLG00000025424) #22	hdhd2 (ENSACLG00000025397) #24	ier3ip1 (ENSACLG00000025360) #23	skor2 (ENSACLG00000025351) #25	ENSACLG00000025298	ENSACLG00000025267	ENSACLG00000025243	ENSACLG00000025219	ENSACLG00000025206	ENSACLG00000025188	ENSACLG00000025167	GRIN3A (ENSACLG00000025105)	PLPPR1 (ENSACLG00000025059)	ENSACLG00000024820	palm2akap2 (ENSACLG00000024792)	SLC46A2 (ENSACLG00000024785)
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000165675.x	ENSGT00390000007731	ENSGT00670000098179.d.b.eb	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302.c #22	ENSGT00940000157302.d #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.db	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000165675.w.a	ENSGT00940000165675.w.b	ENSGT00940000165675.x	ENSGT00390000007731	ENSGT00670000098179.d.b.eb.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302.c #22	ENSGT00940000157302.d #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.db	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005016123	ENSMZEG00005016141	ENSMZEG00005016165	ENSMZEG00005016179	ENSMZEG00005016185	lpar1 (ENSMZEG00005016234)	MUSK (ENSMZEG00005016242)	rassf6 (ENSMZEG00005016261)	si:busm1-57f23.1 (ENSMZEG00005016271)	ENSMZEG00005016276	tmem267 (ENSMZEG00005016290)	cntfr (ENSMZEG00005016321)	galt (ENSMZEG00005016350)	sigmar1 (ENSMZEG00005016364)	katnal2 (ENSMZEG00005016377) #22	katnal2 (ENSMZEG00005016392) #22	hdhd2 (ENSMZEG00005016415) #24	ier3ip1 (ENSMZEG00005016424) #23	skor2 (ENSMZEG00005016435) #25	ENSMZEG00005016452	ENSMZEG00005016464	ENSMZEG00005016466	ENSMZEG00005016498	GRIN3A (ENSMZEG00005016546)	PLPPR1 (ENSMZEG00005016560)	ENSMZEG00005016584	SLC46A2 (ENSMZEG00005016602)	snx30 (ENSMZEG00005016614)	inip (ENSMZEG00005016622)	ENSMZEG00005016628	snx18b (ENSMZEG00005016632)
P. nyererei	MODERN SPECIES	327	ENSPNYG00000009415	ENSPNYG00000009432	ENSPNYG00000009494	ENSPNYG00000009558	ENSPNYG00000009569	lpar1 (ENSPNYG00000009576)	MUSK (ENSPNYG00000009583)	rassf6 (ENSPNYG00000009623)	si:busm1-57f23.1 (ENSPNYG00000009668)	ENSPNYG00000009693	tmem267 (ENSPNYG00000009749)	cntfr (ENSPNYG00000009763)	ENSPNYG00000009780	galt (ENSPNYG00000009809)	sigmar1 (ENSPNYG00000009842)	katnal2 (ENSPNYG00000009872) #22	hdhd2 (ENSPNYG00000009906) #24	ier3ip1 (ENSPNYG00000009939) #23	skor2 (ENSPNYG00000009997) #25	ENSPNYG00000010012	ENSPNYG00000010083	ENSPNYG00000010114	ENSPNYG00000010169	GRIN3A (ENSPNYG00000010532)	PLPPR1 (ENSPNYG00000010573)	ENSPNYG00000010595	palm2akap2 (ENSPNYG00000010605)	SLC46A2 (ENSPNYG00000010657)	snx30 (ENSPNYG00000010671)	inip (ENSPNYG00000010704)	snx18b (ENSPNYG00000010729)
Nile tilapia	MODERN SPECIES	19	ENSONIG00000013105	ENSONIG00000032135	ENSONIG00000029332	lpar1 (ENSONIG00000041468)	MUSK (ENSONIG00000013110)	rassf6 (ENSONIG00000013115)	si:busm1-57f23.1 (ENSONIG00000039089)	ENSONIG00000013117	tmem267 (ENSONIG00000029909)	ENSONIG00000039438	cntfr (ENSONIG00000013119)	ENSONIG00000013120	ENSONIG00000027295	galt (ENSONIG00000004133)	sigmar1 (ENSONIG00000004128)	katnal2 (ENSONIG00000004125) #22	hdhd2 (ENSONIG00000004113) #24	ier3ip1 (ENSONIG00000035044) #23	skor2 (ENSONIG00000004110) #25	ENSONIG00000004109	ENSONIG00000027706	ENSONIG00000036948	ENSONIG00000028442	ENSONIG00000035892	ENSONIG00000041778	ENSONIG00000027843	ENSONIG00000039011	ENSONIG00000004099	GRIN3A (ENSONIG00000004096)	PLPPR1 (ENSONIG00000004093)	ENSONIG00000030482
Midas cichlid	MODERN SPECIES	688	ENSACIG00000000901	ENSACIG00000000635	ENSACIG00000000567	ENSACIG00000000559	lpar1 (ENSACIG00000000524)	MUSK (ENSACIG00000000480)	rassf6 (ENSACIG00000000433)	ENSACIG00000000407	si:busm1-57f23.1 (ENSACIG00000000377)	ENSACIG00000000348	tmem267 (ENSACIG00000000331)	cntfr (ENSACIG00000000283)	ENSACIG00000000243	galt (ENSACIG00000000175)	sigmar1 (ENSACIG00000023968)	katnal2 (ENSACIG00000023967) #22	hdhd2 (ENSACIG00000023965) #24	ier3ip1 (ENSACIG00000023964) #23	skor2 (ENSACIG00000023963) #25	ENSACIG00000023961	ENSACIG00000023960	ENSACIG00000023958	GRIN3A (ENSACIG00000023957)	PLPPR1 (ENSACIG00000023955)
Pomacentridae	ANCESTRAL SPECIES	44	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b	ENSGT00940000154091.a.a.s.b
Pomacentridae_A	ANCESTRAL SPECIES	86	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Amphiprion	ANCESTRAL SPECIES	127												ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b	ENSGT00940000154091.a.a.s.b
Clown anemonefish	MODERN SPECIES	934														galt (ENSAOCG00000022983)	sigmar1 (ENSAOCG00000022955)	katnal2 (ENSAOCG00000022915) #22	hdhd2 (ENSAOCG00000022853) #24	ENSAOCG00000022828	ier3ip1 (ENSAOCG00000022819) #23	skor2 (ENSAOCG00000022790) #25
Orange clownfish	MODERN SPECIES	7	lpar1 (ENSAPEG00000004616)	ENSAPEG00000004550	ENSAPEG00000004460	ENSAPEG00000004428	ENSAPEG00000004415	UNC13B (ENSAPEG00000004293)	stoml2 (ENSAPEG00000004276)	PIGO (ENSAPEG00000004249)	ENSAPEG00000004213	PHF24 (ENSAPEG00000004196)	tmem267 (ENSAPEG00000004155)	ENSAPEG00000004135	cntfr (ENSAPEG00000004103)	galt (ENSAPEG00000004017)	sigmar1 (ENSAPEG00000003979)	katnal2 (ENSAPEG00000003929) #22	hdhd2 (ENSAPEG00000003910) #24	ier3ip1 (ENSAPEG00000003847) #23	skor2 (ENSAPEG00000003830) #25	ENSAPEG00000003770	ENSAPEG00000003756	ENSAPEG00000003746	ENSAPEG00000003733	ENSAPEG00000003450	ENSAPEG00000003381	GRIN3A (ENSAPEG00000003343)	PLPPR1 (ENSAPEG00000003305)	ENSAPEG00000003269	palm2akap2 (ENSAPEG00000003170)	SLC46A2 (ENSAPEG00000003156)	snx30 (ENSAPEG00000003107)
Spiny chromis	MODERN SPECIES	137									noc2l (ENSAPOG00000019587)	KLHL17 (ENSAPOG00000019595)	ENSAPOG00000019660	ENSAPOG00000019675	ENSAPOG00000019689	galt (ENSAPOG00000019738)	sigmar1 (ENSAPOG00000019779)	katnal2 (ENSAPOG00000019803) #22	hdhd2 (ENSAPOG00000019851) #24	ier3ip1 (ENSAPOG00000019961) #23	skor2 (ENSAPOG00000019971) #25	ENSAPOG00000020026	ENSAPOG00000020036	ENSAPOG00000020043	ENSAPOG00000020052	ENSAPOG00000020099
Bicolor damselfish	MODERN SPECIES	350														galt (ENSSPAG00000010263)	sigmar1 (ENSSPAG00000010306)	katnal2 (ENSSPAG00000010320) #22	hdhd2 (ENSSPAG00000010345) #24	ier3ip1 (ENSSPAG00000010378) #23	skor2 (ENSSPAG00000010427) #25	ENSSPAG00000010439	ENSSPAG00000010486	ENSSPAG00000010515	GRIN3A (ENSSPAG00000010566)	PLPPR1 (ENSSPAG00000010603)	ENSSPAG00000010629	ENSSPAG00000010644	SLC46A2 (ENSSPAG00000010685)	snx30 (ENSSPAG00000010724)	inip (ENSSPAG00000010753)	snx18b (ENSSPAG00000010775)	ENSSPAG00000010790
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00940000175255	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00390000002865	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00940000175255	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Climbing perch	MODERN SPECIES	13	UNC13B (ENSATEG00000001261)	ENSATEG00000000981	ENSATEG00000026137	ENSATEG00000027936	ENSATEG00000025876	ENSATEG00000028648	lpar1 (ENSATEG00000000900)	ENSATEG00000000833	ENSATEG00000000772	si:busm1-57f23.1 (ENSATEG00000000765)	ENSATEG00000028013	ENSATEG00000000743	cntfr (ENSATEG00000000735)	galt (ENSATEG00000000677)	sigmar1 (ENSATEG00000026784)	katnal2 (ENSATEG00000000594) #22	hdhd2 (ENSATEG00000000583) #24	ier3ip1 (ENSATEG00000028520) #23	skor2 (ENSATEG00000000488) #25	ENSATEG00000000435	ENSATEG00000000427	ENSATEG00000025380	ENSATEG00000027331	ENSATEG00000028652	ENSATEG00000000215	ENSATEG00000000158	ENSATEG00000000116	ENSATEG00000029247	palm2akap2 (ENSATEG00000029100)	SLC46A2 (ENSATEG00000000093)	snx30 (ENSATEG00000000086)
Siamese fighting fish	MODERN SPECIES	3	PHF24 (ENSBSLG00000008317)	PIGO (ENSBSLG00000008351)	stoml2 (ENSBSLG00000008460)	ENSBSLG00000008791	ENSBSLG00000011590	lpar1 (ENSBSLG00000011620)	MUSK (ENSBSLG00000011706)	rassf6 (ENSBSLG00000011862)	si:busm1-57f23.1 (ENSBSLG00000011899)	ENSBSLG00000011926	tmem267 (ENSBSLG00000011939)	cntfr (ENSBSLG00000011964)	ENSBSLG00000012063	galt (ENSBSLG00000012087)	sigmar1 (ENSBSLG00000012113)	katnal2 (ENSBSLG00000012134) #22	hdhd2 (ENSBSLG00000012198) #24	skor2 (ENSBSLG00000012258) #25	ENSBSLG00000013287	ENSBSLG00000013777	ENSBSLG00000013846	GRIN3A (ENSBSLG00000016680)	PLPPR1 (ENSBSLG00000016812)	ENSBSLG00000016881	palm2akap2 (ENSBSLG00000016910)	SLC46A2 (ENSBSLG00000016995)	snx30 (ENSBSLG00000017034)	snx18b (ENSBSLG00000017185)	rasgef1bb (ENSBSLG00000017238)	antxr2b (ENSBSLG00000017631)	paqr3b (ENSBSLG00000017670)
Zig-zag eel	MODERN SPECIES	3	UNC13B (ENSMAMG00000004231)	ENSMAMG00000005016	ENSMAMG00000005056	ENSMAMG00000005060	ENSMAMG00000018616	lpar1 (ENSMAMG00000026280)	ENSMAMG00000005099	ENSMAMG00000005165	si:busm1-57f23.1 (ENSMAMG00000024369)	ENSMAMG00000027821	ENSMAMG00000005199	cntfr (ENSMAMG00000005218)	ENSMAMG00000005248	galt (ENSMAMG00000005256)	sigmar1 (ENSMAMG00000005282)	katnal2 (ENSMAMG00000005300) #22	hdhd2 (ENSMAMG00000005331) #24	ier3ip1 (ENSMAMG00000026167) #23	skor2 (ENSMAMG00000005366) #25	ENSMAMG00000005395	ENSMAMG00000025753	ENSMAMG00000005436	ENSMAMG00000026505	ENSMAMG00000005449	ENSMAMG00000005475	ENSMAMG00000005687	ENSMAMG00000025821	ENSMAMG00000024336	palm2akap2 (ENSMAMG00000005740)	SLC46A2 (ENSMAMG00000005756)	snx30 (ENSMAMG00000005759)
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Carangaria_A	ANCESTRAL SPECIES	34	ENSGT00940000154929.A	ENSGT00940000165775.b	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Seriola	ANCESTRAL SPECIES	110							ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b.z	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b
Greater amberjack	MODERN SPECIES	203														galt (ENSSDUG00000019117)	sigmar1 (ENSSDUG00000019158)	katnal2 (ENSSDUG00000019183) #22	hdhd2 (ENSSDUG00000019204) #24	ier3ip1 (ENSSDUG00000019225) #23	skor2 (ENSSDUG00000019267) #25	ENSSDUG00000019325	ENSSDUG00000019363	ENSSDUG00000019370	ENSSDUG00000019385	ENSSDUG00000019400	GRIN3A (ENSSDUG00000019437)	PLPPR1 (ENSSDUG00000019465)	ENSSDUG00000019493	palm2akap2 (ENSSDUG00000019519)	SLC46A2 (ENSSDUG00000019538)	snx30 (ENSSDUG00000019556)	inip (ENSSDUG00000019568)
Yellowtail amberjack	MODERN SPECIES	2759						MUSK (ENSSLDG00000013946)	rassf6 (ENSSLDG00000013990)	ENSSLDG00000014008	si:busm1-57f23.1 (ENSSLDG00000014036)	ENSSLDG00000014047	tmem267 (ENSSLDG00000014069)	cntfr (ENSSLDG00000014093)	ENSSLDG00000014116	galt (ENSSLDG00000014129)	sigmar1 (ENSSLDG00000014161)	katnal2 (ENSSLDG00000014193) #22	hdhd2 (ENSSLDG00000014216) #24	skor2 (ENSSLDG00000014249) #25	ENSSLDG00000014280	ENSSLDG00000014316	ENSSLDG00000014327	ENSSLDG00000014352	GRIN3A (ENSSLDG00000014415)	PLPPR1 (ENSSLDG00000014463)	ENSSLDG00000014493	ENSSLDG00000014527	SLC46A2 (ENSSLDG00000014576)	snx30 (ENSSLDG00000014590)	inip (ENSSLDG00000014628)	ENSSLDG00000014651	snx18b (ENSSLDG00000014666)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	140	ENSLCAG00010002807	ENSLCAG00010003578	ENSLCAG00010003805	ENSLCAG00010003807	lpar1 (ENSLCAG00010003809)	MUSK (ENSLCAG00010003816)	rassf6 (ENSLCAG00010003826)	ENSLCAG00010003831	si:busm1-57f23.1 (ENSLCAG00010003836)	ENSLCAG00010003841	tmem267 (ENSLCAG00010003843)	cntfr (ENSLCAG00010003848)	ENSLCAG00010003859	galt (ENSLCAG00010003863)	sigmar1 (ENSLCAG00010003870)	katnal2 (ENSLCAG00010003875) #22
Barramundi perch	MODERN SPECIES	1748																katnal2 (ENSLCAG00010025521) #22
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00390000002865	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00940000157724.a.b
Tongue sole	MODERN SPECIES	5	tmem267 (ENSCSEG00000019975)	ENSCSEG00000019980	ENSCSEG00000019989	ENSCSEG00000019997	rassf6 (ENSCSEG00000020010)	ENSCSEG00000020018	ENSCSEG00000020022	ENSCSEG00000020026	ENSCSEG00000020030	cntfr (ENSCSEG00000020037)	ENSCSEG00000020057	ENSCSEG00000020058	ENSCSEG00000020059	galt (ENSCSEG00000020060)	sigmar1 (ENSCSEG00000020064)	katnal2 (ENSCSEG00000020068) #22	hdhd2 (ENSCSEG00000020072) #24	ier3ip1 (ENSCSEG00000020075) #23	skor2 (ENSCSEG00000020079) #25	ENSCSEG00000020081	ENSCSEG00000020087	ENSCSEG00000020089	ENSCSEG00000020091	ENSCSEG00000020178	GRIN3A (ENSCSEG00000020181)	PLPPR1 (ENSCSEG00000020186)	ENSCSEG00000020200	ENSCSEG00000020202	ENSCSEG00000020275	ENSCSEG00000020276	palm2akap2 (ENSCSEG00000020278)
Turbot	MODERN SPECIES	7	ENSSMAG00000016042	ENSSMAG00000016949	ENSSMAG00000024004	ENSSMAG00000017065	lpar1 (ENSSMAG00000017084)	ENSSMAG00000017104	ENSSMAG00000017146	ENSSMAG00000017182	si:busm1-57f23.1 (ENSSMAG00000034225)	ENSSMAG00000017266	ENSSMAG00000028165	cntfr (ENSSMAG00000017313)	galt (ENSSMAG00000017338)	sigmar1 (ENSSMAG00000033064)	ENSSMAG00000017361	katnal2 (ENSSMAG00000017378) #22	hdhd2 (ENSSMAG00000017391) #24	skor2 (ENSSMAG00000027955) #25	ENSSMAG00000017463	ENSSMAG00000017504	ENSSMAG00000034425	ENSSMAG00000017509	ENSSMAG00000017619	ENSSMAG00000017574	ENSSMAG00000017651	palm2akap2 (ENSSMAG00000025348)	SLC46A2 (ENSSMAG00000017714)	snx30 (ENSSMAG00000017724)	INIP (ENSSMAG00000017739)	snx18b (ENSSMAG00000017753)	ENSSMAG00000017766
Eupercaria	ANCESTRAL SPECIES	13	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Tetraodontidae	ANCESTRAL SPECIES	21	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00940000175255	ENSGT00390000007731	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082.e	ENSGT00940000157302 #22	ENSGT00940000155805 #24
Fugu	DUPLICATION
Fugu	MODERN SPECIES	18	PTBP3 (ENSTRUG00000007042)	hsdl2 (ENSTRUG00000006792)	ENSTRUG00000022497	ENSTRUG00000030319	PHF24 (ENSTRUG00000006683)	PIGO (ENSTRUG00000006340)	ENSTRUG00000019548	ENSTRUG00000004684	ENSTRUG00000027489	ENSTRUG00000031647	lpar1 (ENSTRUG00000004593)	MUSK (ENSTRUG00000003366)	rassf6 (ENSTRUG00000003254)	si:busm1-57f23.1 (ENSTRUG00000002521)	ENSTRUG00000028972	katnal2 (ENSTRUG00000028908) #22	katnal2 (ENSTRUG00000002597) #22	hdhd2 (ENSTRUG00000029288) #24	tmem267 (ENSTRUG00000025924)	cntfr (ENSTRUG00000021850)	ENSTRUG00000028280	ENSTRUG00000024441	ENSTRUG00000030365	galt (ENSTRUG00000016445)	sigmar1 (ENSTRUG00000024592)	ier3ip1 (ENSTRUG00000001826) #23	skor2 (ENSTRUG00000027386) #25	ENSTRUG00000031343	ENSTRUG00000028660	ENSTRUG00000015690	ENSTRUG00000027956
Fugu	MODERN SPECIES	18	hsdl2 (ENSTRUG00000006792)	ENSTRUG00000022497	ENSTRUG00000030319	PHF24 (ENSTRUG00000006683)	PIGO (ENSTRUG00000006340)	ENSTRUG00000019548	ENSTRUG00000004684	ENSTRUG00000027489	ENSTRUG00000031647	lpar1 (ENSTRUG00000004593)	MUSK (ENSTRUG00000003366)	rassf6 (ENSTRUG00000003254)	si:busm1-57f23.1 (ENSTRUG00000002521)	ENSTRUG00000028972	katnal2 (ENSTRUG00000028908) #22	katnal2 (ENSTRUG00000002597) #22	hdhd2 (ENSTRUG00000029288) #24	tmem267 (ENSTRUG00000025924)	cntfr (ENSTRUG00000021850)	ENSTRUG00000028280	ENSTRUG00000024441	ENSTRUG00000030365	galt (ENSTRUG00000016445)	sigmar1 (ENSTRUG00000024592)	ier3ip1 (ENSTRUG00000001826) #23	skor2 (ENSTRUG00000027386) #25	ENSTRUG00000031343	ENSTRUG00000028660	ENSTRUG00000015690	ENSTRUG00000027956	ENSTRUG00000032728
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	gtpbp2b (ENSTNIG00000004743)	tp53bp2b (ENSTNIG00000004742)	rrp36 (ENSTNIG00000004741)	map1lc3c (ENSTNIG00000004740)	strn (ENSTNIG00000004739)	btbd3a (ENSTNIG00000004738)	med16 (ENSTNIG00000004736)	TMEM259 (ENSTNIG00000004735)	wdr18 (ENSTNIG00000004734)	ENSTNIG00000004733	ENSTNIG00000004732	ENSTNIG00000004719	ENSTNIG00000004714	galt (ENSTNIG00000004713)	sigmar1 (ENSTNIG00000004709)	katnal2 (ENSTNIG00000004711) #22	hdhd2 (ENSTNIG00000004710) #24	ier3ip1 (ENSTNIG00000001119) #23	sigmar1 (ENSTNIG00000004712)	ENSTNIG00000000650 #22	ppil3 (ENSTNIG00000004708)	ier3ip1 (ENSTNIG00000004707) #23	skor2 (ENSTNIG00000004706) #25	FHL1 (ENSTNIG00000004689)	ENSTNIG00000004688	ENSTNIG00000004687	trhrb (ENSTNIG00000004683)	ENSTNIG00000001601	ENSTNIG00000000032	JMJD1C (ENSTNIG00000004669)	cyp26a1 (ENSTNIG00000004668)
Tetraodon	MODERN SPECIES	26	strn (ENSTNIG00000004739)	btbd3a (ENSTNIG00000004738)	med16 (ENSTNIG00000004736)	TMEM259 (ENSTNIG00000004735)	wdr18 (ENSTNIG00000004734)	ENSTNIG00000004733	ENSTNIG00000004732	ENSTNIG00000004719	ENSTNIG00000004714	galt (ENSTNIG00000004713)	sigmar1 (ENSTNIG00000004709)	katnal2 (ENSTNIG00000004711) #22	hdhd2 (ENSTNIG00000004710) #24	ier3ip1 (ENSTNIG00000001119) #23	sigmar1 (ENSTNIG00000004712)	ENSTNIG00000000650 #22	ppil3 (ENSTNIG00000004708)	ier3ip1 (ENSTNIG00000004707) #23	skor2 (ENSTNIG00000004706) #25	FHL1 (ENSTNIG00000004689)	ENSTNIG00000004688	ENSTNIG00000004687	trhrb (ENSTNIG00000004683)	ENSTNIG00000001601	ENSTNIG00000000032	JMJD1C (ENSTNIG00000004669)	cyp26a1 (ENSTNIG00000004668)	exoc6 (ENSTNIG00000004667)	ENSTNIG00000004650	icmt (ENSTNIG00000004636)	si:dkeyp-104h9.5 (ENSTNIG00000004635)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000163716.d.a	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Ballan wrasse	MODERN SPECIES	94	FER (ENSLBEG00000020677)	ENSLBEG00000020732	RNF224 (ENSLBEG00000020748)	pisd (ENSLBEG00000020771)	ENSLBEG00000020807	ythdc1 (ENSLBEG00000020831)	UFC1 (ENSLBEG00000020876)	fktn (ENSLBEG00000020900)	ENSLBEG00000020953	ENSLBEG00000020989	ENSLBEG00000021021	ENSLBEG00000021078	ENSLBEG00000021133	galt (ENSLBEG00000021338)	sigmar1 (ENSLBEG00000021385)	katnal2 (ENSLBEG00000021429) #22	hdhd2 (ENSLBEG00000021490) #24	ENSLBEG00000021515	ENSLBEG00000021530	skor2 (ENSLBEG00000021546) #25	ENSLBEG00000021560	ENSLBEG00000021593	ENSLBEG00000021607	GRIN3A (ENSLBEG00000021639)	PLPPR1 (ENSLBEG00000021686)	ENSLBEG00000021730	palm2akap2 (ENSLBEG00000021743)	SLC46A2 (ENSLBEG00000021759)	snx30 (ENSLBEG00000021797)	ENSLBEG00000021833	snx18b (ENSLBEG00000021857)
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000161051.a.b	ENSGT00940000161931	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000161051.a.b	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00940000161051.a.b	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
European seabass	MODERN SPECIES	9	UNC13B (ENSDLAG00005015571)	ENSDLAG00005015171	ENSDLAG00005026535	ENSDLAG00005015151	ENSDLAG00005028797	ENSDLAG00005015141	lpar1 (ENSDLAG00005015130)	ENSDLAG00005015059	ENSDLAG00005015018	si:busm1-57f23.1 (ENSDLAG00005015004)	ENSDLAG00005014998	ENSDLAG00005033181	ENSDLAG00005014982	cntfr (ENSDLAG00005014939)	galt (ENSDLAG00005014366)	katnal2 (ENSDLAG00005014233) #22	hdhd2 (ENSDLAG00005014203) #24	ier3ip1 (ENSDLAG00005027076) #23	skor2 (ENSDLAG00005014188) #25	ENSDLAG00005013941	ENSDLAG00005013932	ENSDLAG00005032011	ENSDLAG00005032241	ENSDLAG00005012808	ENSDLAG00005012750	ENSDLAG00005012711	ENSDLAG00005012688	palm2akap2 (ENSDLAG00005012662)	SLC46A2 (ENSDLAG00005012643)	snx30 (ENSDLAG00005033001)	INIP (ENSDLAG00005034143)
Large yellow croaker	MODERN SPECIES	3	stoml2 (ENSLCRG00005006552)	UNC13B (ENSLCRG00005005646)	ENSLCRG00005002410	ENSLCRG00005002305	ENSLCRG00005002304	lpar1 (ENSLCRG00005002303)	MUSK (ENSLCRG00005002302)	rassf6 (ENSLCRG00005002296)	ENSLCRG00005002292	si:busm1-57f23.1 (ENSLCRG00005002289)	ENSLCRG00005002288	tmem267 (ENSLCRG00005002287)	cntfr (ENSLCRG00005002282)	galt (ENSLCRG00005002212)	sigmar1 (ENSLCRG00005002203)	katnal2 (ENSLCRG00005002199) #22	hdhd2 (ENSLCRG00005002190) #24	ier3ip1 (ENSLCRG00005002185) #23	skor2 (ENSLCRG00005002180) #25	ENSLCRG00005001615	ENSLCRG00005001569	ENSLCRG00005001558	ENSLCRG00005001532	ENSLCRG00005023712	ENSLCRG00005023648	GRIN3A (ENSLCRG00005023636)	PLPPR1 (ENSLCRG00005023634)	ENSLCRG00005023632	ENSLCRG00005023629	palm2akap2 (ENSLCRG00005023628)	SLC46A2 (ENSLCRG00005023627)
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010013299	ENSSAUG00010013303	ENSSAUG00010013305	ENSSAUG00010013306	ENSSAUG00010013309	lpar1 (ENSSAUG00010013315)	MUSK (ENSSAUG00010013320)	rassf6 (ENSSAUG00010013337)	ENSSAUG00010013341	si:busm1-57f23.1 (ENSSAUG00010013344)	ENSSAUG00010013348	tmem267 (ENSSAUG00010013354)	cntfr (ENSSAUG00010013358)	galt (ENSSAUG00010013371)	sigmar1 (ENSSAUG00010013401)	katnal2 (ENSSAUG00010013404) #22	hdhd2 (ENSSAUG00010013415) #24	ier3ip1 (ENSSAUG00010013420) #23	skor2 (ENSSAUG00010013422) #25	ENSSAUG00010013430	ENSSAUG00010013605	ENSSAUG00010013606	ENSSAUG00010013607	ENSSAUG00010013608	ENSSAUG00010013618	GRIN3A (ENSSAUG00010014429)	PLPPR1 (ENSSAUG00010014433)	ENSSAUG00010014435	palm2akap2 (ENSSAUG00010014443)	SLC46A2 (ENSSAUG00010014446)	snx30 (ENSSAUG00010014452)
Perciformes	ANCESTRAL SPECIES	16	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00910000144278	ENSGT01030000234614.A.l.a	ENSGT00940000154929.A	ENSGT00940000165675	ENSGT00390000007731	ENSGT00670000098179.d.b	ENSGT01050000244941.A	ENSGT00940000158226	ENSGT00940000159886	ENSGT00390000009872	ENSGT00940000165521.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b	ENSGT00940000157724.a.b
Pike perch	MODERN SPECIES	92	stoml2 (ENSSLUG00000025195)	UNC13B (ENSSLUG00000024585)	ENSSLUG00000023688	ENSSLUG00000023532	lpar1 (ENSSLUG00000023523)	MUSK (ENSSLUG00000023505)	rassf6 (ENSSLUG00000023501)	si:busm1-57f23.1 (ENSSLUG00000023495)	ENSSLUG00000023483	tmem267 (ENSSLUG00000023475)	ENSSLUG00000023472	cntfr (ENSSLUG00000023460)	ENSSLUG00000023457	galt (ENSSLUG00000023216)	sigmar1 (ENSSLUG00000023185)	katnal2 (ENSSLUG00000023176) #22	hdhd2 (ENSSLUG00000023163) #24	ier3ip1 (ENSSLUG00000023158) #23	skor2 (ENSSLUG00000023142) #25	ENSSLUG00000023017	ENSSLUG00000022995	ENSSLUG00000022992	ENSSLUG00000022646	ENSSLUG00000022590	ENSSLUG00000022583
Channel bull blenny	MODERN SPECIES	3	prkab1a (ENSCGOG00000024219)	PHF24 (ENSCGOG00000024221)	ENSCGOG00000024222	ENSCGOG00000004246	ENSCGOG00000007238	ENSCGOG00000007315	ENSCGOG00000007320	lpar1 (ENSCGOG00000007326)	MUSK (ENSCGOG00000007333)	ENSCGOG00000007351	ENSCGOG00000007353	tmem267 (ENSCGOG00000007357)	cntfr (ENSCGOG00000007365)	galt (ENSCGOG00000007386)	sigmar1 (ENSCGOG00000007566)	katnal2 (ENSCGOG00000007571) #22	hdhd2 (ENSCGOG00000007680) #24	skor2 (ENSCGOG00000007925) #25	ENSCGOG00000007945	ENSCGOG00000009123	ENSCGOG00000009125	ENSCGOG00000009127	ENSCGOG00000009187	GRIN3A (ENSCGOG00000011068)	PLPPR1 (ENSCGOG00000011076)	ENSCGOG00000011081	palm2akap2 (ENSCGOG00000011084)	SLC46A2 (ENSCGOG00000011091)	snx30 (ENSCGOG00000011098)	ENSCGOG00000011133	ENSCGOG00000011134
Cottioidei	ANCESTRAL SPECIES	18	ENSGT00950000182909.a.e	ENSGT01010000222287.B.b.b.b	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00940000157438.d	ENSGT00390000015757	ENSGT00940000161555	ENSGT00390000000360	ENSGT01090000259997.a.d.b.a.a.b.b	ENSGT00940000157449.a	ENSGT00390000003050	ENSGT00940000158864	ENSGT00390000016188	ENSGT00390000012082	ENSGT00940000157302 #22	ENSGT00940000155805 #24	ENSGT00510000047648.a #23	ENSGT00940000160474 #25	ENSGT00940000153499.b.b.c	ENSGT00940000164878.b	ENSGT00670000098179.d.b	ENSGT00940000163892.C.a.b	ENSGT00940000158571	ENSGT00940000158875	ENSGT00940000161837.c.b	ENSGT00940000161837.c.a	ENSGT00950000183096.a.b	ENSGT00940000158994	ENSGT00390000006366.a	ENSGT00390000013183.d.a.b
Lumpfish	MODERN SPECIES	3	ENSCLMG00005006335	spp1 (ENSCLMG00005006336)	ENSCLMG00005006341	vldlr (ENSCLMG00005006358)	KCNV2 (ENSCLMG00005007779)	pum3 (ENSCLMG00005007780)	ENSCLMG00005007782	ENSCLMG00005007785	BRCC3 (ENSCLMG00005007787)	ENSCLMG00005007790	RAB27B (ENSCLMG00005007791)	tmem267 (ENSCLMG00005007792)	cntfr (ENSCLMG00005007793)	galt (ENSCLMG00005007797)	sigmar1 (ENSCLMG00005007865)	katnal2 (ENSCLMG00005007867) #22	hdhd2 (ENSCLMG00005007869) #24	ier3ip1 (ENSCLMG00005007871) #23	skor2 (ENSCLMG00005007872) #25	ENSCLMG00005007873	ENSCLMG00005007875	ENSCLMG00005007880	ENSCLMG00005007881	ENSCLMG00005007883	GRIN3A (ENSCLMG00005008669)	PLPPR1 (ENSCLMG00005008671)	ENSCLMG00005008673	ENSCLMG00005008675	palm2akap2 (ENSCLMG00005008679)	SLC46A2 (ENSCLMG00005008687)	snx30 (ENSCLMG00005008688)
Stickleback	MODERN SPECIES	13	ENSGACG00000017897	spp1 (ENSGACG00000017894)	ENSGACG00000017890	vldlr (ENSGACG00000017886)	KCNV2 (ENSGACG00000017884)	pum3 (ENSGACG00000017878)	ENSGACG00000017876	ENSGACG00000017875	BRCC3 (ENSGACG00000017873)	RAB27B (ENSGACG00000017867)	tmem267 (ENSGACG00000017864)	ENSGACG00000017862	cntfr (ENSGACG00000017859)	galt (ENSGACG00000017839)	sigmar1 (ENSGACG00000017833)	katnal2 (ENSGACG00000017829) #22	hdhd2 (ENSGACG00000017824) #24	skor2 (ENSGACG00000017822) #25	ENSGACG00000017820	ENSGACG00000017817	ENSGACG00000017815	ENSGACG00000017813	ENSGACG00000017807	GRIN3A (ENSGACG00000017805)	PLPPR1 (ENSGACG00000017793)	ENSGACG00000017791	SLC46A2 (ENSGACG00000017786)	snx30 (ENSGACG00000017783)	snx18b (ENSGACG00000017780)	ENSGACG00000017776	rasgef1bb (ENSGACG00000017774)
Pinecone sodierfish	MODERN SPECIES	5	sat1a.2 (ENSMMDG00005007960)	prdx4 (ENSMMDG00005007963)	pdha1a (ENSMMDG00005008006)	pdha1a (ENSMMDG00005008199)	ENSMMDG00005010189	si:ch211-114c12.2 (ENSMMDG00005010190)	lipia (ENSMMDG00005010193)	pcyt1bb (ENSMMDG00005010196)	ENSMMDG00005010199	ENSMMDG00005010202	ENSMMDG00005010207	ENSMMDG00005010208	ENSMMDG00005010210	ENSMMDG00005010211	ENSMMDG00005010212	katnal2 (ENSMMDG00005010214) #22	hyou1 (ENSMMDG00005010272)	ENSMMDG00005016115	hist2h2l (ENSMMDG00005016116)	ENSMMDG00005016117	ENSMMDG00005016120	ENSMMDG00005016159	hspa8 (ENSMMDG00005016168)	bsx (ENSMMDG00005016178)	lim2.1 (ENSMMDG00005016181)	ntm (ENSMMDG00005016188)	opcml (ENSMMDG00005016210)	PANX3 (ENSMMDG00005016215)	pknox2 (ENSMMDG00005016231)	tmem218 (ENSMMDG00005016235)	ENSMMDG00005016253
Cod	MODERN SPECIES	10	ENSGMOG00000005394	ENSGMOG00000026117	ENSGMOG00000036702	ENSGMOG00000030311	ENSGMOG00000029685	ENSGMOG00000034143	ENSGMOG00000031420	ccng2 (ENSGMOG00000006418)	ccni (ENSGMOG00000006427)	ENSGMOG00000006441	SHROOM3 (ENSGMOG00000036595)	ENSGMOG00000025294	ENSGMOG00000035017	ENSGMOG00000030532	ENSGMOG00000026035	ENSGMOG00000013644 #22	ENSGMOG00000013632 #24	ENSGMOG00000028218	ENSGMOG00000033692	ENSGMOG00000014639	ENSGMOG00000035131	ENSGMOG00000035431	ENSGMOG00000031419	NARS1 (ENSGMOG00000012599)	FECH (ENSGMOG00000012605)	WDR7 (ENSGMOG00000014743)	ENSGMOG00000013413	TXNL1 (ENSGMOG00000010549)	TCF4 (ENSGMOG00000018104)	RAB27B (ENSGMOG00000018955)	ENSGMOG00000029060
Spotted gar	MODERN SPECIES	658	paip1 (ENSLOCG00000012270)	ENSLOCG00000017548	nnt (ENSLOCG00000012282)	fgf10b (ENSLOCG00000012296)	rai14 (ENSLOCG00000012300)	amacr (ENSLOCG00000012318)	slc45a2 (ENSLOCG00000012323)	RXFP3 (ENSLOCG00000017549)	ADAMTS12 (ENSLOCG00000012331)	ENSLOCG00000012345	tmem267 (ENSLOCG00000012351)	IL11RA (ENSLOCG00000012354)	cntfr (ENSLOCG00000012362)	galt (ENSLOCG00000012369)	sigmar1 (ENSLOCG00000012381)	katnal2 (ENSLOCG00000012385) #22	hdhd2 (ENSLOCG00000012392) #24	skor2 (ENSLOCG00000012403) #25	SMAD2 (ENSLOCG00000012409)	ENSLOCG00000012421	ENSLOCG00000012428	cldn23.1 (ENSLOCG00000017550)	ENSLOCG00000012442	ENSLOCG00000012446	ENSLOCG00000012458	ENSLOCG00000012470	ENSLOCG00000012476	ENSLOCG00000012480	rchy1 (ENSLOCG00000012485)	spp1 (ENSLOCG00000012495)	ENSLOCG00000012502
Reedfish	MODERN SPECIES	15	KLHL2 (ENSECRG00000007705)	tmem192 (ENSECRG00000007733)	ENSECRG00000007739	SMIM31 (ENSECRG00000007749)	MARCHF1 (ENSECRG00000007762)	ENSECRG00000007781	tma16 (ENSECRG00000007806)	NPY5R (ENSECRG00000007816)	rai14 (ENSECRG00000007831)	tmem267 (ENSECRG00000007850)	IL11RA (ENSECRG00000007857)	cntfr (ENSECRG00000007868)	ENSECRG00000007879	galt (ENSECRG00000007892)	sigmar1 (ENSECRG00000007911)	katnal2 (ENSECRG00000007921) #22	hdhd2 (ENSECRG00000007937) #24	ier3ip1 (ENSECRG00000007948) #23	skor2 (ENSECRG00000007957) #25	SMAD2 (ENSECRG00000007967)	ZBTB7C (ENSECRG00000007988)	ENSECRG00000008006	CTIF (ENSECRG00000008014)	smad7 (ENSECRG00000008025)	DYM (ENSECRG00000008045)	C18orf32 (ENSECRG00000008179)	rpl17 (ENSECRG00000008193)	nkx6.1 (ENSECRG00000008236)	cycsb (ENSECRG00000008271)	GPAT3 (ENSECRG00000008282)	abraxas1 (ENSECRG00000008293)
Elephant shark	MODERN SPECIES	2053															pias2 (ENSCMIG00000008419)	katnal2 (ENSCMIG00000008427) #22	hdhd2 (ENSCMIG00000008431) #24
Cyclostomata	ANCESTRAL SPECIES	209																ENSGT00940000157302 #22	ENSGT00940000153269.a.b	ENSGT00940000153269.a.a
Lamprey	MODERN SPECIES	1054														mcm7 (ENSPMAG00000005356)	ENSPMAG00000005462	katnal2 (ENSPMAG00000005512) #22	ENSPMAG00000005551
Hagfish	MODERN SPECIES	554																katnal2 (ENSEBUG00000002520) #22	ENSEBUG00000001956	ENSEBUG00000015794	ENSEBUG00000009443	ENSEBUG00000009243
Ciona	ANCESTRAL SPECIES																	ENSGT00940000157302 #22
Ciona intestinalis	MODERN SPECIES	9	ENSCING00000021113	ENSCING00000020824	ENSCING00000022760	ENSCING00000009216	ENSCING00000016680	ENSCING00000009217	ENSCING00000012096	ENSCING00000017928	ENSCING00000009220	ENSCING00000023452	ENSCING00000009238	ENSCING00000021810	ENSCING00000022498	ENSCING00000009852	ENSCING00000012090	ENSCING00000009236 #22	ENSCING00000009851	ENSCING00000009235	ENSCING00000009234	ENSCING00000012091	ENSCING00000024197	ENSCING00000021824	ENSCING00000023375	ENSCING00000009233	ENSCING00000024733	ENSCING00000012092	ENSCING00000018402	ENSCING00000023679	ENSCING00000009231	ENSCING00000019202	ENSCING00000012094