Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Glires	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Rodentia	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Muroidea	ANCESTRAL SPECIES	68	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.d #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.d #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.d #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Northern American deer mouse	MODERN SPECIES	15	Wasf3 (ENSPEMG00000011510) #7	ENSPEMG00000030961 #8	Gpr12 (ENSPEMG00000010665) #9	Usp12 (ENSPEMG00000008193) #10	Rpl21 (ENSPEMG00000006041) #11	Rasl11a (ENSPEMG00000004475) #12	Gtf3a (ENSPEMG00000003201) #13	Mtif3 (ENSPEMG00000000930) #14	Lnx2 (ENSPEMG00000008280) #15	Polr1d (ENSPEMG00000006336) #16	Gsx1 (ENSPEMG00000004992) #17	Pdx1 (ENSPEMG00000001176) #18	Cdx2 (ENSPEMG00000000632) #19	Urad (ENSPEMG00000025423) #20	Flt3 (ENSPEMG00000012278) #21	Pan3 (ENSPEMG00000008992) #22	Flt1 (ENSPEMG00000019000) #23	ENSPEMG00000014341 #24	Slc46a3 (ENSPEMG00000014019) #25	ENSPEMG00000024696 #26	Mtus2 (ENSPEMG00000011863) #27	Slc7a1 (ENSPEMG00000006808) #28	Ubl3 (ENSPEMG00000010779) #29	Katnal1 (ENSPEMG00000009164) #30	ENSPEMG00000000834 #31	Uspl1 (ENSPEMG00000003660) #32	Alox5ap (ENSPEMG00000000576) #33	Medag (ENSPEMG00000000331) #34	Tex26 (ENSPEMG00000019024) #35	Wdr95 (ENSPEMG00000016428) #36	Hsph1 (ENSPEMG00000009941) #37
Prairie vole	MODERN SPECIES	7	ENSMOCG00000017944	Gpr12 (ENSMOCG00000009890) #9	Usp12 (ENSMOCG00000001714) #10	Rpl21 (ENSMOCG00000003487) ##11	Rasl11a (ENSMOCG00000000626) #12	ENSMOCG00000017124	Gtf3a (ENSMOCG00000004408) #13	Mtif3 (ENSMOCG00000017226) #14	Lnx2 (ENSMOCG00000022088) #15	Polr1d (ENSMOCG00000021288) #16	Gsx1 (ENSMOCG00000002374) #17	Pdx1 (ENSMOCG00000007886) #18	Cdx2 (ENSMOCG00000010222) #19	Urad (ENSMOCG00000018154) #20	Flt3 (ENSMOCG00000015945) #21	Pan3 (ENSMOCG00000001443) #22	Flt1 (ENSMOCG00000019790) #23	ENSMOCG00000000648	Pomp (ENSMOCG00000006131) #24	Slc46a3 (ENSMOCG00000007090) #25	Mtus2 (ENSMOCG00000013900) #27	Slc7a1 (ENSMOCG00000022298) #28	Ubl3 (ENSMOCG00000012896) #29	Katnal1 (ENSMOCG00000013914) #30	ENSMOCG00000018161 ##31	ENSMOCG00000018612 #32	Alox5ap (ENSMOCG00000018258) #33	Medag (ENSMOCG00000012447) #34	Tex26 (ENSMOCG00000013830) #35	Wdr95 (ENSMOCG00000021942) #36	Hsph1 (ENSMOCG00000019013) #37
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.d #11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499	ENSGT00940000158948.b
Chinese hamster chok1gshd	MODERN SPECIES	130	Gpr12 (ENSCGRG00001003285) #9	ENSCGRG00001021742 #10	Rpl21 (ENSCGRG00001007602) #11	Rasl11a (ENSCGRG00001014752) #12	Gtf3a (ENSCGRG00001024969) #13	Mtif3 (ENSCGRG00001024612) #14	ENSCGRG00001024532	Lnx2 (ENSCGRG00001022751) #15	Polr1d (ENSCGRG00001021251) #16	Gsx1 (ENSCGRG00001017641) #17	Pdx1 (ENSCGRG00001024891) #18	Cdx2 (ENSCGRG00001024259) #19	Urad (ENSCGRG00001021146) #20	Flt3 (ENSCGRG00001010328) #21	ENSCGRG00001012489	Pan3 (ENSCGRG00001024986) #22	Flt1 (ENSCGRG00001000764) #23	Pomp (ENSCGRG00001000803) #24	Slc46a3 (ENSCGRG00001023870) #25	ENSCGRG00001001206	Mtus2 (ENSCGRG00001023648) #27	Slc7a1 (ENSCGRG00001019393) #28	Ubl3 (ENSCGRG00001002093) #29	Katnal1 (ENSCGRG00001024027) #30	ENSCGRG00001018342 #32	Alox5ap (ENSCGRG00001018470) #33	ENSCGRG00001025063	Medag (ENSCGRG00001024417) #34	Tex26 (ENSCGRG00001015836) #35	Wdr95 (ENSCGRG00001015579) #36	Hsph1 (ENSCGRG00001021270) #37
Golden Hamster	MODERN SPECIES	762	Rfc3 (ENSMAUG00000016464)	Gpr12 (ENSMAUG00000015064) #9	ENSMAUG00000010877	Usp12 (ENSMAUG00000010310) #10	ENSMAUG00000006957 #11	Rasl11a (ENSMAUG00000019356) #12	Gtf3a (ENSMAUG00000016253) #13	Mtif3 (ENSMAUG00000011167) #14	Lnx2 (ENSMAUG00000009457) #15	Polr1d (ENSMAUG00000001946) #16	Pdx1 (ENSMAUG00000021082) #18	Cdx2 (ENSMAUG00000020822) #19	Urad (ENSMAUG00000019946) #20	ENSMAUG00000001106	Flt3 (ENSMAUG00000011952) #21	Pan3 (ENSMAUG00000021155) #22	Flt1 (ENSMAUG00000006859) #23	Pomp (ENSMAUG00000006509) #24	ENSMAUG00000020285	ENSMAUG00000018323 #27	Slc7a1 (ENSMAUG00000000359) #28	Ubl3 (ENSMAUG00000016399) #29	Katnal1 (ENSMAUG00000007731) #30	ENSMAUG00000017646	ENSMAUG00000013736 #32	Alox5ap (ENSMAUG00000012262) #33	Medag (ENSMAUG00000009604) #34	Tex26 (ENSMAUG00000016345) #35	Wdr95 (ENSMAUG00000014604) #36	Hsph1 (ENSMAUG00000002443) #37	B3glct (ENSMAUG00000018787)
Murinae	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00960000191336	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Mus	ANCESTRAL SPECIES	17	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00960000191336	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00960000191336	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00960000191336	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.b.c.c.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00960000191336	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
spretus	MODERN SPECIES	14	Cdk8 (MGP_SPRETEiJ_G0029023)	Wasf3 (MGP_SPRETEiJ_G0029024) #7	Gpr12 (MGP_SPRETEiJ_G0029025) #9	Usp12 (MGP_SPRETEiJ_G0029026) #10	MGP_SPRETEiJ_G0029027 ##11	Rasl11a (MGP_SPRETEiJ_G0029028) #12	Gtf3a (MGP_SPRETEiJ_G0029029) #13	Mtif3 (MGP_SPRETEiJ_G0029030) #14	Lnx2 (MGP_SPRETEiJ_G0029031) #15	Polr1d (MGP_SPRETEiJ_G0029032) #16	Gsx1 (MGP_SPRETEiJ_G0029033) #17	Pdx1 (MGP_SPRETEiJ_G0029034) #18	Cdx2 (MGP_SPRETEiJ_G0029035) #19	Urad (MGP_SPRETEiJ_G0029036) #20	Flt3 (MGP_SPRETEiJ_G0029037) #21	Pan3 (MGP_SPRETEiJ_G0029038) #22	Flt1 (MGP_SPRETEiJ_G0029039) #23	Pomp (MGP_SPRETEiJ_G0029040) #24	Slc46a3 (MGP_SPRETEiJ_G0029041) #25	Mtus2 (MGP_SPRETEiJ_G0029042) #27	Slc7a1 (MGP_SPRETEiJ_G0029043) #28	Ubl3 (MGP_SPRETEiJ_G0029044) #29	MGP_SPRETEiJ_G0029045 #30	MGP_SPRETEiJ_G0029046 #30	MGP_SPRETEiJ_G0029047 #31	Uspl1 (MGP_SPRETEiJ_G0029048) #32	Alox5ap (MGP_SPRETEiJ_G0029049) #33	Medag (MGP_SPRETEiJ_G0029050) #34	Tex26 (MGP_SPRETEiJ_G0029051) #35	Wdr95 (MGP_SPRETEiJ_G0029052) #36	Hsph1 (MGP_SPRETEiJ_G0029053) #37
Steppe mouse	MODERN SPECIES	3364	Gpr12 (ENSMSIG00000024129) #9	ENSMSIG00000024119	Usp12 (ENSMSIG00000024096) #10	ENSMSIG00000024049 ##11	Rasl11a (ENSMSIG00000024039) #12	Gtf3a (ENSMSIG00000024026) #13	Mtif3 (ENSMSIG00000024005) #14	Lnx2 (ENSMSIG00000023999) #15	ENSMSIG00000023978 #16	Gsx1 (ENSMSIG00000023969) #17	Pdx1 (ENSMSIG00000023956) #18	Cdx2 (ENSMSIG00000023947) #19	ENSMSIG00000023941	ENSMSIG00000023930	Flt3 (ENSMSIG00000023851) #21	Pan3 (ENSMSIG00000023687) #22	Flt1 (ENSMSIG00000023642) #23	ENSMSIG00000023628	Pomp (ENSMSIG00000023598) #24	Slc46a3 (ENSMSIG00000023578) #25	Mtus2 (ENSMSIG00000023484) #27	Slc7a1 (ENSMSIG00000023421) #28	Ubl3 (ENSMSIG00000023402) #29	Katnal1 (ENSMSIG00000023377) #30	ENSMSIG00000023332 ##31	Uspl1 (ENSMSIG00000023285) #32	Alox5ap (ENSMSIG00000023243) #33	ENSMSIG00000023226	Medag (ENSMSIG00000023188) #34	Tex26 (ENSMSIG00000023128) #35	Wdr95 (ENSMSIG00000023065) #36
Mouse	MODERN SPECIES	14	Gm3409 (ENSMUSG00000096664)	Gm3415 (ENSMUSG00000095557)	Gpr12 (ENSMUSG00000041468) #9	Usp12 (ENSMUSG00000029640) #10	Rpl21 (ENSMUSG00000041453) ##11	Rasl11a (ENSMUSG00000029641) #12	Gtf3a (ENSMUSG00000016503) #13	Mtif3 (ENSMUSG00000016510) #14	Lnx2 (ENSMUSG00000016520) #15	Polr1d (ENSMUSG00000029642) #16	Gsx1 (ENSMUSG00000053129) #17	Pdx1 (ENSMUSG00000029644) #18	Cdx2 (ENSMUSG00000029646) #19	Urad (ENSMUSG00000075543) #20	Flt3 (ENSMUSG00000042817) #21	Pan3 (ENSMUSG00000029647) #22	Flt1 (ENSMUSG00000029648) #23	Pomp (ENSMUSG00000029649) #24	Slc46a3 (ENSMUSG00000029650) #25	Mtus2 (ENSMUSG00000029651) #27	Slc7a1 (ENSMUSG00000041313) #28	Ubl3 (ENSMUSG00000001687) #29	Katnal1 (ENSMUSG00000041298) #30	Hmgb1 (ENSMUSG00000066551) ##31	Uspl1 (ENSMUSG00000041264) #32	Alox5ap (ENSMUSG00000060063) #33	Medag (ENSMUSG00000029659) #34	Tex26 (ENSMUSG00000029660) #35	Wdr95 (ENSMUSG00000029658) #36	Hsph1 (ENSMUSG00000029657) #37	B3glct (ENSMUSG00000051950)
Ryukyu mouse	MODERN SPECIES	14	Cdk8 (MGP_CAROLIEiJ_G0028025)	Wasf3 (MGP_CAROLIEiJ_G0028026) #7	Gpr12 (MGP_CAROLIEiJ_G0028027) #9	Usp12 (MGP_CAROLIEiJ_G0028028) #10	Rpl21 (MGP_CAROLIEiJ_G0028029) ##11	Rasl11a (MGP_CAROLIEiJ_G0028030) #12	Gtf3a (MGP_CAROLIEiJ_G0028031) #13	Mtif3 (MGP_CAROLIEiJ_G0028032) #14	Lnx2 (MGP_CAROLIEiJ_G0028033) #15	Polr1d (MGP_CAROLIEiJ_G0028034) #16	Gsx1 (MGP_CAROLIEiJ_G0028035) #17	Pdx1 (MGP_CAROLIEiJ_G0028036) #18	Cdx2 (MGP_CAROLIEiJ_G0028037) #19	Urad (MGP_CAROLIEiJ_G0028038) #20	Flt3 (MGP_CAROLIEiJ_G0028039) #21	Pan3 (MGP_CAROLIEiJ_G0028040) #22	Flt1 (MGP_CAROLIEiJ_G0028041) #23	Pomp (MGP_CAROLIEiJ_G0028042) #24	Slc46a3 (MGP_CAROLIEiJ_G0028043) #25	Mtus2 (MGP_CAROLIEiJ_G0028044) #27	Slc7a1 (MGP_CAROLIEiJ_G0028045) #28	Ubl3 (MGP_CAROLIEiJ_G0028046) #29	MGP_CAROLIEiJ_G0028047 #30	MGP_CAROLIEiJ_G0028048 #30	MGP_CAROLIEiJ_G0028049 #31	Uspl1 (MGP_CAROLIEiJ_G0028050) #32	MGP_CAROLIEiJ_G0028051 #33	Medag (MGP_CAROLIEiJ_G0028052) #34	Tex26 (MGP_CAROLIEiJ_G0028053) #35	Wdr95 (MGP_CAROLIEiJ_G0028054) #36	Hsph1 (MGP_CAROLIEiJ_G0028055) #37
Shrew mouse	MODERN SPECIES	15	Cdk8 (MGP_PahariEiJ_G0024591)	Wasf3 (MGP_PahariEiJ_G0024592) #7	Gpr12 (MGP_PahariEiJ_G0024593) #9	Usp12 (MGP_PahariEiJ_G0024594) #10	MGP_PahariEiJ_G0024595 ##11	Rasl11a (MGP_PahariEiJ_G0024596) #12	Gtf3a (MGP_PahariEiJ_G0024597) #13	Mtif3 (MGP_PahariEiJ_G0024598) #14	Lnx2 (MGP_PahariEiJ_G0024599) #15	Polr1d (MGP_PahariEiJ_G0024600) #16	Gsx1 (MGP_PahariEiJ_G0024601) #17	Pdx1 (MGP_PahariEiJ_G0024602) #18	Cdx2 (MGP_PahariEiJ_G0024603) #19	Urad (MGP_PahariEiJ_G0024604) #20	Flt3 (MGP_PahariEiJ_G0024605) #21	Pan3 (MGP_PahariEiJ_G0024606) #22	Flt1 (MGP_PahariEiJ_G0024607) #23	MGP_PahariEiJ_G0024608	Slc46a3 (MGP_PahariEiJ_G0024609) #25	Mtus2 (MGP_PahariEiJ_G0024610) #27	Slc7a1 (MGP_PahariEiJ_G0024611) #28	Ubl3 (MGP_PahariEiJ_G0024612) #29	MGP_PahariEiJ_G0024613 #30	MGP_PahariEiJ_G0024614 #30	MGP_PahariEiJ_G0024615 #31	Uspl1 (MGP_PahariEiJ_G0024616) #32	Alox5ap (MGP_PahariEiJ_G0024617) #33	Medag (MGP_PahariEiJ_G0024618) #34	Tex26 (MGP_PahariEiJ_G0024619) #35	MGP_PahariEiJ_G0024620 #36	Hsph1 (MGP_PahariEiJ_G0024621) #37
Rat	MODERN SPECIES	3	LOC120095889 (ENSRNOG00000050264)	Wasf3 (ENSRNOG00000048898) #7	Gpr12 (ENSRNOG00000039832) #9	Usp12 (ENSRNOG00000033411) #10	Rpl21 (ENSRNOG00000000957) #11	Rasl11a (ENSRNOG00000000956) #12	Gtf3a (ENSRNOG00000050016) #13	Mtif3 (ENSRNOG00000070811) #14	Lnx2 (ENSRNOG00000000955) #15	Polr1d (ENSRNOG00000000954) #16	Gsx1 (ENSRNOG00000000952) #17	Pdx1 (ENSRNOG00000046458) #18	Cdx2 (ENSRNOG00000032759) #19	Urad (ENSRNOG00000050360) #20	Flt3 (ENSRNOG00000054764) #21	Pan3 (ENSRNOG00000000942) #22	Flt1 (ENSRNOG00000000940) #23	Pomp (ENSRNOG00000049229) ##24	Slc46a3 (ENSRNOG00000000937) #25	Mtus2 (ENSRNOG00000032410) #27	Slc7a1 (ENSRNOG00000000924) #28	Katnal1 (ENSRNOG00000047618) #30	Rpl35a-ps6 (ENSRNOG00000069961)	AABR07035218.1 (ENSRNOG00000029813) ##31	Uspl1 (ENSRNOG00000000909) #32	Alox5ap (ENSRNOG00000000907) #33	AABR07035203.1 (ENSRNOG00000060198)	Medag (ENSRNOG00000000906) #34	Tex26 (ENSRNOG00000000905) #35	Wdr95 (ENSRNOG00000000904) #36	Hsph1 (ENSRNOG00000000902) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Usp12 (ENSNGAG00000023867) #10	ENSNGAG00000012493	ENSNGAG00000022375 ##11	Rasl11a (ENSNGAG00000021721) #12	Gtf3a (ENSNGAG00000023691) #13	Mtif3 (ENSNGAG00000022911) #14	Lnx2 (ENSNGAG00000010972) #15	Polr1d (ENSNGAG00000006014) #16	ENSNGAG00000019459	ENSNGAG00000020643	Gsx1 (ENSNGAG00000013964) #17	ENSNGAG00000011527	Pdx1 (ENSNGAG00000024275) #18	Cdx2 (ENSNGAG00000019299) #19	Flt3 (ENSNGAG00000022203) #21	Pan3 (ENSNGAG00000005671) #22	Flt1 (ENSNGAG00000022615) #23	ENSNGAG00000019389 #24	Slc46a3 (ENSNGAG00000023221) #25	ENSNGAG00000022087	ENSNGAG00000011243 ##27	ENSNGAG00000023043 #27	Slc7a1 (ENSNGAG00000011095) #28	Ubl3 (ENSNGAG00000021531) #29	Katnal1 (ENSNGAG00000018344) #30	ENSNGAG00000020735 ##31	Uspl1 (ENSNGAG00000021450) #32	Alox5ap (ENSNGAG00000010455) #33	Medag (ENSNGAG00000021713) #34	Tex26 (ENSNGAG00000016306) #35	ENSNGAG00000021744
Lesser Egyptian jerboa	MODERN SPECIES	73	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294) #7	Gpr12 (ENSJJAG00000012507) #9	Usp12 (ENSJJAG00000019341) #10	Rasl11a (ENSJJAG00000020910) #12	Gtf3a (ENSJJAG00000011501) #13	Mtif3 (ENSJJAG00000013006) #14	Lnx2 (ENSJJAG00000014998) #15	ENSJJAG00000022671 #16	ENSJJAG00000009076	Gsx1 (ENSJJAG00000021574) #17	Pdx1 (ENSJJAG00000017468) #18	Cdx2 (ENSJJAG00000010229) #19	Urad (ENSJJAG00000022682) #20	Flt3 (ENSJJAG00000004796) #21	Pan3 (ENSJJAG00000013560) #22	Flt1 (ENSJJAG00000009276) #23	Pomp (ENSJJAG00000014017) #24	Slc46a3 (ENSJJAG00000015117) #25	ENSJJAG00000008307 #27	Slc7a1 (ENSJJAG00000022034) #28	Ubl3 (ENSJJAG00000016514) #29	Katnal1 (ENSJJAG00000011429) #30	ENSJJAG00000000696 #31	ENSJJAG00000014544 #32	Alox5ap (ENSJJAG00000004614) #33	Medag (ENSJJAG00000017396) #34	Tex26 (ENSJJAG00000007098) #35	Wdr95 (ENSJJAG00000015306) #36	Hsph1 (ENSJJAG00000000436) #37	B3glct (ENSJJAG00000022078)
Kangaroo rat	MODERN SPECIES	421	Wasf3 (ENSDORG00000003345) #7	Gpr12 (ENSDORG00000011141) #9	Usp12 (ENSDORG00000009137) #10	ENSDORG00000002224	ENSDORG00000002226 ##11	Rasl11a (ENSDORG00000026016) #12	Gtf3a (ENSDORG00000006079) #13	ENSDORG00000006081 #14	Lnx2 (ENSDORG00000013453) #15	Polr1d (ENSDORG00000029155) #16	Gsx1 (ENSDORG00000029182) #17	Pdx1 (ENSDORG00000008418) #18	Cdx2 (ENSDORG00000005495) #19	Urad (ENSDORG00000025006) #20	Flt3 (ENSDORG00000010727) #21	Pan3 (ENSDORG00000014727) #22	Flt1 (ENSDORG00000014729) #23	Pomp (ENSDORG00000012432) #24	Slc46a3 (ENSDORG00000012433) #25	ENSDORG00000025782 #27	Slc7a1 (ENSDORG00000006086) #28	ENSDORG00000026706	Ubl3 (ENSDORG00000026903) #29	Katnal1 (ENSDORG00000012794) #30	ENSDORG00000027930 #31	Uspl1 (ENSDORG00000007790) #32	Alox5ap (ENSDORG00000006041) #33	Medag (ENSDORG00000008557) #34	ENSDORG00000008558 #35	Wdr95 (ENSDORG00000026485) #36	ENSDORG00000014903 #37
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.c #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.c #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647.c #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Degu	MODERN SPECIES	79	GPR12 (ENSODEG00000006388) #9	USP12 (ENSODEG00000006744) #10	ENSODEG00000005022 ##11	RASL11A (ENSODEG00000005775) #12	GTF3A (ENSODEG00000006725) #13	MTIF3 (ENSODEG00000006818) #14	LNX2 (ENSODEG00000006222) #15	ENSODEG00000005294 #16	ENSODEG00000006454	GSX1 (ENSODEG00000005135) #17	ENSODEG00000019134	PDX1 (ENSODEG00000005235) #18	CDX2 (ENSODEG00000007340) #19	ENSODEG00000007620 #20	FLT3 (ENSODEG00000007884) #21	PAN3 (ENSODEG00000005038) #22	ENSODEG00000006016	ENSODEG00000006274 #23	ENSODEG00000005111 #24	ENSODEG00000005569	SLC46A3 (ENSODEG00000006238) #25	ENSODEG00000006635	ENSODEG00000005871 #27	SLC7A1 (ENSODEG00000005306) #28	ENSODEG00000005438	UBL3 (ENSODEG00000005571) #29	KATNAL1 (ENSODEG00000005926) #30	ENSODEG00000006120 ##31	USPL1 (ENSODEG00000007176) #32	ALOX5AP (ENSODEG00000005645) #33	MEDAG (ENSODEG00000005967) #34
Long-tailed chinchilla	MODERN SPECIES	204	CDK8 (ENSCLAG00000003311)	WASF3 (ENSCLAG00000003372) #7	GPR12 (ENSCLAG00000003409) #9	USP12 (ENSCLAG00000003543) #10	Rpl21 (ENSCLAG00000003656) ##11	RASL11A (ENSCLAG00000003867) #12	GTF3A (ENSCLAG00000003912) #13	MTIF3 (ENSCLAG00000004080) #14	LNX2 (ENSCLAG00000004148) #15	POLR1D (ENSCLAG00000017623) #16	ENSCLAG00000004320	GSX1 (ENSCLAG00000004357) #17	PDX1 (ENSCLAG00000006652) #18	CDX2 (ENSCLAG00000006810) #19	FLT3 (ENSCLAG00000007093) #21	PAN3 (ENSCLAG00000007575) #22	FLT1 (ENSCLAG00000008187) #23	POMP (ENSCLAG00000008609) #24	SLC46A3 (ENSCLAG00000009379) #25
Guinea pig	MODERN SPECIES	6	RNF6 (ENSCPOG00000009120)	CDK8 (ENSCPOG00000040435)	WASF3 (ENSCPOG00000010156) #7	ENSCPOG00000020112	USP12 (ENSCPOG00000005241) #10	ENSCPOG00000008784 ##11	RASL11A (ENSCPOG00000031264) #12	GTF3A (ENSCPOG00000010143) #13	MTIF3 (ENSCPOG00000010148) #14	LNX2 (ENSCPOG00000010152) #15	ENSCPOG00000033461	ENSCPOG00000026854	PDX1 (ENSCPOG00000024534) #18	CDX2 (ENSCPOG00000007276) #19	FLT3 (ENSCPOG00000007285) #21	PAN3 (ENSCPOG00000013349) #22	FLT1 (ENSCPOG00000013357) #23	POMP (ENSCPOG00000001710) #24	SLC46A3 (ENSCPOG00000015460) #25	ENSCPOG00000005581 #27	SLC7A1 (ENSCPOG00000005590) #28	UBL3 (ENSCPOG00000036242) #29	KATNAL1 (ENSCPOG00000000804) #30	HMGB1 (ENSCPOG00000031835) ##31	USPL1 (ENSCPOG00000009937) #32	ALOX5AP (ENSCPOG00000032690) #33	MEDAG (ENSCPOG00000003921) #34	ENSCPOG00000007441 #37	ENSCPOG00000035490	B3GLCT (ENSCPOG00000007455)	RXFP2 (ENSCPOG00000009157)
Naked mole-rat female	MODERN SPECIES	2	WASF3 (ENSHGLG00000006350) #7	GPR12 (ENSHGLG00000042343) #9	ENSHGLG00000006711 #10	ENSHGLG00000005660 ##11	RASL11A (ENSHGLG00000005304) #12	ENSHGLG00000004173 #13	MTIF3 (ENSHGLG00000003959) #14	LNX2 (ENSHGLG00000003410) #15	POLR1D (ENSHGLG00000039229) #16	ENSHGLG00000003202	GSX1 (ENSHGLG00000039858) #17	PDX1 (ENSHGLG00000010243) #18	CDX2 (ENSHGLG00000009166) #19	URAD (ENSHGLG00000008479)	FLT3 (ENSHGLG00000005717) #21	PAN3 (ENSHGLG00000018782) #22	FLT1 (ENSHGLG00000003643) #23	ENSHGLG00000008991 #24	SLC46A3 (ENSHGLG00000007999) #25	ENSHGLG00000039882 ##24	ENSHGLG00000012383	ENSHGLG00000013589 #27	ENSHGLG00000019220 #28	ENSHGLG00000033244	UBL3 (ENSHGLG00000040587) #29	KATNAL1 (ENSHGLG00000003538) #30	ENSHGLG00000003352 ##31	USPL1 (ENSHGLG00000036213) #32	ALOX5AP (ENSHGLG00000013689) #33	MEDAG (ENSHGLG00000037818) #34	TEX26 (ENSHGLG00000018916) #35
Sciuridae	ANCESTRAL SPECIES	34	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.a ##11	ENSGT00940000153284.a.g.a ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Marmotini	ANCESTRAL SPECIES	29	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.a ##11	ENSGT00940000153284.a.g.a ##10	ENSGT00950000182922.a.a.a.b.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00950000183120.e.b.a.a.b.b.b.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000162967 #36	ENSGT00940000159635 #37	ENSGT00940000155499
Squirrel	MODERN SPECIES	72	SLITRK5 (ENSSTOG00000022257)	GPR12 (ENSSTOG00000011362) #9	ENSSTOG00000023839	USP12 (ENSSTOG00000011364) #10	ENSSTOG00000033637 ##11	RASL11A (ENSSTOG00000023879) #12	GTF3A (ENSSTOG00000013853) #13	MTIF3 (ENSSTOG00000013866) #14	LNX2 (ENSSTOG00000013869) #15	POLR1D (ENSSTOG00000013877) #16	GSX1 (ENSSTOG00000029234) #17	PDX1 (ENSSTOG00000028173) #18	ENSSTOG00000002918 #19	ENSSTOG00000028014 #20	FLT3 (ENSSTOG00000002925) #21	PAN3 (ENSSTOG00000009453) #22	FLT1 (ENSSTOG00000021178) #23	POMP (ENSSTOG00000013687) #24	SLC46A3 (ENSSTOG00000013694) #25	ENSSTOG00000022794 #27	SLC7A1 (ENSSTOG00000012771) #28	UBL3 (ENSSTOG00000012777) #29	KATNAL1 (ENSSTOG00000008802) #30	ENSSTOG00000000443 #31	USPL1 (ENSSTOG00000028023) #32	ALOX5AP (ENSSTOG00000010915) #33	MEDAG (ENSSTOG00000003534) #34	ENSSTOG00000020892 #36	HSPH1 (ENSSTOG00000001700) #37	B3GLCT (ENSSTOG00000001710)	RXFP2 (ENSSTOG00000010636)
Arctic ground squirrel	MODERN SPECIES	58		SLITRK5 (ENSUPAG00010018031)	GPR12 (ENSUPAG00010018043) #9	USP12 (ENSUPAG00010018049) #10	ENSUPAG00010018061 ##11	RASL11A (ENSUPAG00010018073) #12	GTF3A (ENSUPAG00010018082) #13	MTIF3 (ENSUPAG00010018090) #14	LNX2 (ENSUPAG00010018096) #15	POLR1D (ENSUPAG00010018107) #16	GSX1 (ENSUPAG00010018112) #17	PDX1 (ENSUPAG00010018122) #18	CDX2 (ENSUPAG00010018125) #19	ENSUPAG00010018133 #20	FLT3 (ENSUPAG00010018139) #21	PAN3 (ENSUPAG00010000039) #22	FLT1 (ENSUPAG00010000212) #23	POMP (ENSUPAG00010000279) #24	SLC46A3 (ENSUPAG00010000307) #25	ENSUPAG00010000323	ENSUPAG00010000338 #27	SLC7A1 (ENSUPAG00010000429) #28	UBL3 (ENSUPAG00010000449) #29	KATNAL1 (ENSUPAG00010000483) #30	ENSUPAG00010000514 ##31	USPL1 (ENSUPAG00010000537) #32	ALOX5AP (ENSUPAG00010000582) #33	MEDAG (ENSUPAG00010000596) #34	TEX26 (ENSUPAG00010000608) #35	ENSUPAG00010000650 #36	HSPH1 (ENSUPAG00010000704) #37
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000021355	SLITRK5 (ENSMMMG00000021362)	GPR12 (ENSMMMG00000021388) #9	ENSMMMG00000021396	ENSMMMG00000021402 ##10	RPL21 (ENSMMMG00000021415) ##11	RASL11A (ENSMMMG00000021424) #12	GTF3A (ENSMMMG00000021436) #13	MTIF3 (ENSMMMG00000021440) #14	LNX2 (ENSMMMG00000021459) #15	POLR1D (ENSMMMG00000021469) #16	GSX1 (ENSMMMG00000021480) #17	CDX2 (ENSMMMG00000021482) #19	ENSMMMG00000021485 #20	FLT3 (ENSMMMG00000021498) #21	PAN3 (ENSMMMG00000021592) #22	FLT1 (ENSMMMG00000021722) #23	POMP (ENSMMMG00000021745) #24	SLC46A3 (ENSMMMG00000021759) #25	ENSMMMG00000021777 #27	SLC7A1 (ENSMMMG00000021811) #28	UBL3 (ENSMMMG00000021836) #29	KATNAL1 (ENSMMMG00000021861) #30	ENSMMMG00000021875 ##31	ENSMMMG00000021912 #32	ALOX5AP (ENSMMMG00000021924) #33	MEDAG (ENSMMMG00000021928) #34	TEX26 (ENSMMMG00000021931) #35	ENSMMMG00000021936 #36	HSPH1 (ENSMMMG00000021945) #37	B3GLCT (ENSMMMG00000022023)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005000440	ENSSVLG00005000420	GPR12 (ENSSVLG00005000385) #9	ENSSVLG00005000350 ##10	ENSSVLG00005000213 ##11	RASL11A (ENSSVLG00005023466) #12	GTF3A (ENSSVLG00005023413) #13	MTIF3 (ENSSVLG00005023396) #14	LNX2 (ENSSVLG00005023366) #15	POLR1D (ENSSVLG00005023318) #16	GSX1 (ENSSVLG00005023295) #17	PDX1 (ENSSVLG00005023276) #18	CDX2 (ENSSVLG00005023249) #19	URAD (ENSSVLG00005023233)	FLT3 (ENSSVLG00005023095) #21	PAN3 (ENSSVLG00005022998) #22	FLT1 (ENSSVLG00005022893) #23	POMP (ENSSVLG00005022839) #24	SLC46A3 (ENSSVLG00005022784) #25	MTUS2 (ENSSVLG00005022484) #27	SLC7A1 (ENSSVLG00005022416) #28	UBL3 (ENSSVLG00005022374) #29	KATNAL1 (ENSSVLG00005022343) #30	ENSSVLG00005022302 ##31	USPL1 (ENSSVLG00005022232) #32	ALOX5AP (ENSSVLG00005022177) #33	MEDAG (ENSSVLG00005022152) #34	TEX26 (ENSSVLG00005022083) #35	ENSSVLG00005021904 #36	HSPH1 (ENSSVLG00005021367) #37	B3GLCT (ENSSVLG00005021156)
Lagomorpha	ANCESTRAL SPECIES	166				ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28
Rabbit	MODERN SPECIES	468			USP12 (ENSOCUG00000007088) #10	ENSOCUG00000002506 ##11	RASL11A (ENSOCUG00000008121) #12	ENSOCUG00000038419	GTF3A (ENSOCUG00000011713) #13	MTIF3 (ENSOCUG00000011721) #14	LNX2 (ENSOCUG00000015683) #15	ENSOCUG00000015706	GSX1 (ENSOCUG00000023424) #17	PDX1 (ENSOCUG00000004891) #18	CDX2 (ENSOCUG00000004893) #19	URAD (ENSOCUG00000026219)	FLT3 (ENSOCUG00000004897) #21	PAN3 (ENSOCUG00000008509) #22	FLT1 (ENSOCUG00000008523) #23	POMP (ENSOCUG00000010137) #24	SLC46A3 (ENSOCUG00000010129) #25	ENSOCUG00000013473 #27	ENSOCUG00000030839 #27	SLC7A1 (ENSOCUG00000013493) #28
Pika	MODERN SPECIES	2256																PAN3 (ENSOPRG00000016465) #22	FLT1 (ENSOPRG00000016484) #23	POMP (ENSOPRG00000016517) #24	SLC46A3 (ENSOPRG00000016527) #25
Tree shrew	MODERN SPECIES	2583																PAN3 (ENSTBEG00000017359) #22	FLT1 (ENSTBEG00000009960) #23
Primates	ANCESTRAL SPECIES	29	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37	ENSGT00940000155499
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00950000183120.e.b.a.a.b.b.b.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37	ENSGT00940000155499
Catarrhini	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00940000154686.g.b
Hominidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.a.b.b.b.b ##31	ENSGT00390000002316 #32
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h	ENSGT00940000153654.ub
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h	ENSGT00940000153654.ub
Pan	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00390000015470.z.b	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00930000151026.f	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00950000183203.d.h
Chimpanzee	MODERN SPECIES	4	GPR12 (ENSPTRG00000046989) #9	USP12 (ENSPTRG00000005727) #10	RPL21 (ENSPTRG00000005728) ##11	RASL11A (ENSPTRG00000005729) #12	GTF3A (ENSPTRG00000005730) #13	MTIF3 (ENSPTRG00000005732) #14	LNX2 (ENSPTRG00000005733) #15	POLR1D (ENSPTRG00000005734) #16	GSX1 (ENSPTRG00000005735) #17	PDX1 (ENSPTRG00000005736) #18	ENSPTRG00000005737	CDX2 (ENSPTRG00000043330) #19	URAD (ENSPTRG00000005739)	FLT3 (ENSPTRG00000005740) #21	ENSPTRG00000046829	PAN3 (ENSPTRG00000005742) #22	FLT1 (ENSPTRG00000005743) #23	ENSPTRG00000045890	ENSPTRG00000046663	POMP (ENSPTRG00000005745) #24	SLC46A3 (ENSPTRG00000005746) #25	ENSPTRG00000045489	MTUS2 (ENSPTRG00000005747) #27	ENSPTRG00000046056	SLC7A1 (ENSPTRG00000005750) #28	ENSPTRG00000049804	UBL3 (ENSPTRG00000005751) #29	KATNAL1 (ENSPTRG00000005753) #30	ENSPTRG00000044243	UBE2L5 (ENSPTRG00000050842)	ENSPTRG00000048008 ##31
Bonobo	MODERN SPECIES	4	CDK8 (ENSPPAG00000035126)	WASF3 (ENSPPAG00000035699) #7	GPR12 (ENSPPAG00000007707) #9	ENSPPAG00000007246 #10	ENSPPAG00000042860 ##11	RASL11A (ENSPPAG00000027996) #12	GTF3A (ENSPPAG00000034725) #13	MTIF3 (ENSPPAG00000027304) #14	LNX2 (ENSPPAG00000027444) #15	ENSPPAG00000028138 #16	GSX1 (ENSPPAG00000032556) #17	ENSPPAG00000032720 #18	ENSPPAG00000032440	CDX2 (ENSPPAG00000032963) #19	FLT3 (ENSPPAG00000015701) #21	PAN3 (ENSPPAG00000027826) #22	ENSPPAG00000030264	ENSPPAG00000033250 #23	ENSPPAG00000027416	POMP (ENSPPAG00000036286) #24	SLC46A3 (ENSPPAG00000035795) #25	ENSPPAG00000027903	MTUS2 (ENSPPAG00000032687) #27	ENSPPAG00000034238	SLC7A1 (ENSPPAG00000037016) #28	ENSPPAG00000015303	UBL3 (ENSPPAG00000027496) #29	KATNAL1 (ENSPPAG00000033530) #30	ENSPPAG00000037440	UBE2L5 (ENSPPAG00000032233)	ENSPPAG00000030148 ##31
Human	MODERN SPECIES	4	CDK8 (ENSG00000132964)	WASF3 (ENSG00000132970) #7	GPR12 (ENSG00000132975) #9	USP12 (ENSG00000152484) #10	RPL21 (ENSG00000122026) ##11	RASL11A (ENSG00000122035) #12	GTF3A (ENSG00000122034) #13	MTIF3 (ENSG00000122033) #14	LNX2 (ENSG00000139517) #15	POLR1D (ENSG00000186184) #16	GSX1 (ENSG00000169840) #17	PDX1 (ENSG00000139515) #18	CDX2 (ENSG00000165556) #19	URAD (ENSG00000183463)	FLT3 (ENSG00000122025) #21	PAN3 (ENSG00000152520) #22	FLT1 (ENSG00000102755) #23	POMP (ENSG00000132963) #24	SLC46A3 (ENSG00000139508) #25	MTUS2 (ENSG00000132938) #27	SLC7A1 (ENSG00000139514) #28	UBL3 (ENSG00000122042) #29	KATNAL1 (ENSG00000102781) #30	UBE2L5 (ENSG00000236444)	HMGB1 (ENSG00000189403) ##31	USPL1 (ENSG00000132952) #32	ALOX5AP (ENSG00000132965) #33	MEDAG (ENSG00000102802) #34	TEX26 (ENSG00000175664) #35	HSPH1 (ENSG00000120694) #37	B3GLCT (ENSG00000187676)
Gorilla	MODERN SPECIES	4	CDK8 (ENSGGOG00000006569)	WASF3 (ENSGGOG00000012518) #7	GPR12 (ENSGGOG00000000849) #9	ENSGGOG00000011358 #10	ENSGGOG00000003002 ##11	RASL11A (ENSGGOG00000008785) #12	GTF3A (ENSGGOG00000008407) #13	MTIF3 (ENSGGOG00000041079) #14	LNX2 (ENSGGOG00000016167) #15	POLR1D (ENSGGOG00000004235) #16	GSX1 (ENSGGOG00000005011) #17	PDX1 (ENSGGOG00000002569) #18	CDX2 (ENSGGOG00000005487) #19	URAD (ENSGGOG00000005489)	FLT3 (ENSGGOG00000000882) #21	PAN3 (ENSGGOG00000016079) #22	FLT1 (ENSGGOG00000008750) #23	ENSGGOG00000036812	ENSGGOG00000036780	POMP (ENSGGOG00000015316) #24	SLC46A3 (ENSGGOG00000014254) #25	ENSGGOG00000042729	UBL3 (ENSGGOG00000023146) #29	KATNAL1 (ENSGGOG00000026875) #30	ENSGGOG00000024714	UBE2L5 (ENSGGOG00000006857)	HMGB1 (ENSGGOG00000026764) ##31	USPL1 (ENSGGOG00000004673) #32	ENSGGOG00000013859 #33	MEDAG (ENSGGOG00000009867) #34	TEX26 (ENSGGOG00000016812) #35
Orangutan	MODERN SPECIES	4	GPR12 (ENSPPYG00000005231) #9	USP12 (ENSPPYG00000005232) #10	RPL21 (ENSPPYG00000005233) ##11	RASL11A (ENSPPYG00000005234) #12	GTF3A (ENSPPYG00000005235) #13	MTIF3 (ENSPPYG00000005236) #14	LNX2 (ENSPPYG00000005237) #15	ENSPPYG00000005238	GSX1 (ENSPPYG00000005239) #17	PDX1 (ENSPPYG00000005240) #18	ENSPPYG00000005241	CDX2 (ENSPPYG00000005242) #19	URAD (ENSPPYG00000005243)	FLT3 (ENSPPYG00000005244) #21	ENSPPYG00000040072	PAN3 (ENSPPYG00000005245) #22	FLT1 (ENSPPYG00000005246) #23	ENSPPYG00000034417	ENSPPYG00000038952	POMP (ENSPPYG00000005247) #24	SLC46A3 (ENSPPYG00000005248) #25	MTUS2 (ENSPPYG00000005249) #27	SLC7A1 (ENSPPYG00000005250) #28	ENSPPYG00000034870	UBL3 (ENSPPYG00000037129) #29	KATNAL1 (ENSPPYG00000005253) #30	ENSPPYG00000031030	UBE2L5 (ENSPPYG00000005254)	ENSPPYG00000030447 ##31	USPL1 (ENSPPYG00000005543) #32	ENSPPYG00000005255 #33
Gibbon	MODERN SPECIES	24	ATP2B4 (ENSNLEG00000018117)	ENSNLEG00000000323 #10	ENSNLEG00000000327 ##11	RASL11A (ENSNLEG00000000329) #12	GTF3A (ENSNLEG00000000331) #13	MTIF3 (ENSNLEG00000000343) #14	LNX2 (ENSNLEG00000000345) #15	ENSNLEG00000000358 #16	GSX1 (ENSNLEG00000000360) #17	PDX1 (ENSNLEG00000000362) #18	CDX2 (ENSNLEG00000000365) #19	URAD (ENSNLEG00000000369)	FLT3 (ENSNLEG00000000372) #21	ENSNLEG00000035718	ENSNLEG00000029210	PAN3 (ENSNLEG00000000388) #22	FLT1 (ENSNLEG00000000456) #23	ENSNLEG00000030098	ENSNLEG00000033802	ENSNLEG00000000571	POMP (ENSNLEG00000000572) #24	SLC46A3 (ENSNLEG00000000599) #25	ENSNLEG00000000618 #27	ENSNLEG00000033304	ENSNLEG00000035615 #27	SLC7A1 (ENSNLEG00000000622) #28	UBL3 (ENSNLEG00000000660) #29	KATNAL1 (ENSNLEG00000000679) #30	ENSNLEG00000000717	UBE2L5 (ENSNLEG00000018657)	ENSNLEG00000000720 ##31
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000155828.o.a	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000155828.o.a	ENSGT00940000156630 #30	ENSGT00940000154686.g.b	ENSGT00390000002316 #32
Macaca	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35
Pig-tailed macaque	MODERN SPECIES	165	GPR12 (ENSMNEG00000010974) #9	ENSMNEG00000039505 #10	ENSMNEG00000034115 ##11	RASL11A (ENSMNEG00000033345) #12	GTF3A (ENSMNEG00000043473) #13	MTIF3 (ENSMNEG00000032443) #14	LNX2 (ENSMNEG00000040860) #15	ENSMNEG00000034652	ENSMNEG00000008630 #16	GSX1 (ENSMNEG00000032682) #17	PDX1 (ENSMNEG00000032095) #18	CDX2 (ENSMNEG00000043440) #19	URAD (ENSMNEG00000045421)	FLT3 (ENSMNEG00000032442) #21	ENSMNEG00000043801	PAN3 (ENSMNEG00000032817) #22	FLT1 (ENSMNEG00000032149) #23	ENSMNEG00000028177	ENSMNEG00000043904	POMP (ENSMNEG00000031404) #24	SLC46A3 (ENSMNEG00000038996) #25	MTUS2 (ENSMNEG00000039238) #27	SLC7A1 (ENSMNEG00000044453) #28	SLC5A7 (ENSMNEG00000039266)	ENSMNEG00000022050	ST6GAL2 (ENSMNEG00000036708)	ENSMNEG00000019179	ENSMNEG00000044732	UXS1 (ENSMNEG00000040004)	ECRG4 (ENSMNEG00000043594)	NCK2 (ENSMNEG00000039028)
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.i.a #10	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT01100000263493.a.b.a.a.b.a.b.b	ENSGT00940000158381 #15	ENSGT00390000003643	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a	ENSGT00950000183120.e.b.a.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37
Rhesus	MODERN SPECIES	8	ENSMMUG00000050226	USP12 (ENSMMUG00000021425) #10	ENSMMUG00000054994	ENSMMUG00000058755 ##11	RASL11A (ENSMMUG00000049650) #12	GTF3A (ENSMMUG00000009029) #13	MTIF3 (ENSMMUG00000009030) #14	ENSMMUG00000059867	LNX2 (ENSMMUG00000058786) #15	POLR1D (ENSMMUG00000020386)	GSX1 (ENSMMUG00000004507) #17	PDX1 (ENSMMUG00000064615) #18	CDX2 (ENSMMUG00000052070) #19	URAD (ENSMMUG00000016138)	FLT3 (ENSMMUG00000016139) #21	PAN3 (ENSMMUG00000022522) #22	FLT1 (ENSMMUG00000021538) #23	ENSMMUG00000063649	POMP (ENSMMUG00000058998) #24	SLC46A3 (ENSMMUG00000013721) #25	MTUS2 (ENSMMUG00000008658) #27	SLC7A1 (ENSMMUG00000008661) #28	UBL3 (ENSMMUG00000003771) #29	KATNAL1 (ENSMMUG00000004922) #30	UBE2L5 (ENSMMUG00000008940)	ENSMMUG00000058466	HMGB1 (ENSMMUG00000046615) ##31	ENSMMUG00000052770	USPL1 (ENSMMUG00000007597) #32	ALOX5AP (ENSMMUG00000005572) #33	ENSMMUG00000053993
Crab-eating macaque	MODERN SPECIES	8	ENSMFAG00000062305	ENSMFAG00000053340 ##11	RASL11A (ENSMFAG00000044628) #12	GTF3A (ENSMFAG00000044837) #13	MTIF3 (ENSMFAG00000045045) #14	ENSMFAG00000050995	LNX2 (ENSMFAG00000045245) #15	ENSMFAG00000045264	GSX1 (ENSMFAG00000037158) #17	PDX1 (ENSMFAG00000063371) #18	CDX2 (ENSMFAG00000051158) #19	URAD (ENSMFAG00000043442)	FLT3 (ENSMFAG00000044854) #21	ENSMFAG00000052223	ENSMFAG00000063510	PAN3 (ENSMFAG00000025538) #22	FLT1 (ENSMFAG00000035718) #23	ENSMFAG00000039222	POMP (ENSMFAG00000025369) #24	SLC46A3 (ENSMFAG00000030072) #25	MTUS2 (ENSMFAG00000032200) #27	SLC7A1 (ENSMFAG00000043457) #28	UBL3 (ENSMFAG00000044955) #29	KATNAL1 (ENSMFAG00000053013) #30	ENSMFAG00000053527	UBE2L5 (ENSMFAG00000045697)	ENSMFAG00000030905 ##31	USPL1 (ENSMFAG00000032370) #32	ALOX5AP (ENSMFAG00000032586) #33	MEDAG (ENSMFAG00000035649) #34	TEX26 (ENSMFAG00000035671) #35
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000155828.o.a	ENSGT00940000156630 #30	ENSGT00940000154686.g.b	ENSGT00390000002316 #32
Olive baboon	MODERN SPECIES	6	GPR12 (ENSPANG00000003061) #9	USP12 (ENSPANG00000011533) #10	ENSPANG00000011984 ##11	RASL11A (ENSPANG00000044196) #12	GTF3A (ENSPANG00000012593) #13	MTIF3 (ENSPANG00000005047) #14	LNX2 (ENSPANG00000012983) #15	ENSPANG00000020259 #16	ENSPANG00000038544	GSX1 (ENSPANG00000017129) #17	ENSPANG00000047094	PDX1 (ENSPANG00000012683) #18	CDX2 (ENSPANG00000050183) #19	URAD (ENSPANG00000014018)	FLT3 (ENSPANG00000009315) #21	PAN3 (ENSPANG00000001988) #22	FLT1 (ENSPANG00000009892) #23	ENSPANG00000044787	POMP (ENSPANG00000046275) #24	SLC46A3 (ENSPANG00000020218) #25	MTUS2 (ENSPANG00000013682) #27	SLC7A1 (ENSPANG00000012138) #28	UBL3 (ENSPANG00000008471) #29	KATNAL1 (ENSPANG00000023364) #30	UBE2L5 (ENSPANG00000043221)	HMGB1 (ENSPANG00000007200) ##31	USPL1 (ENSPANG00000005488) #32	ALOX5AP (ENSPANG00000020217) #33	MEDAG (ENSPANG00000021857) #34	TEX26 (ENSPANG00000012755) #35	HSPH1 (ENSPANG00000012232) #37
Cercopithecinae_d	ANCESTRAL SPECIES	93	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00910000147903	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00940000153229.A.b	ENSGT00940000160575 #21	ENSGT00440000038159.p.b	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153783.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031
Sooty mangabey	MODERN SPECIES	255	ENSCATG00000018180	ENSCATG00000038452 #10	ENSCATG00000032591 ##11	RASL11A (ENSCATG00000033838) #12	GTF3A (ENSCATG00000032361) #13	MTIF3 (ENSCATG00000007775) #14	LNX2 (ENSCATG00000035354) #15	ENSCATG00000030710 #16	ENSCATG00000002488	GSX1 (ENSCATG00000028004) #17	PDX1 (ENSCATG00000035793) #18	CDX2 (ENSCATG00000007363) #19	URAD (ENSCATG00000007826)	FLT3 (ENSCATG00000014529) #21	ENSCATG00000032726	PAN3 (ENSCATG00000030893) #22	FLT1 (ENSCATG00000034541) #23	ENSCATG00000024438	ENSCATG00000028829	ENSCATG00000033485	POMP (ENSCATG00000037462) #24	SLC46A3 (ENSCATG00000021488) #25	MTUS2 (ENSCATG00000041831) #27	ENSCATG00000037549	SLC7A1 (ENSCATG00000025899) #28	ENSCATG00000034802
Drill	MODERN SPECIES	1324	RNF6 (ENSMLEG00000038569)	CDK8 (ENSMLEG00000040071)	WASF3 (ENSMLEG00000040168) #7	GPR12 (ENSMLEG00000002545) #9	ENSMLEG00000033598 #10	ENSMLEG00000024280 ##11	RASL11A (ENSMLEG00000036089) #12	GTF3A (ENSMLEG00000039703) #13	MTIF3 (ENSMLEG00000039110) #14	LNX2 (ENSMLEG00000039062) #15	ENSMLEG00000041048 #16	ENSMLEG00000041805	PDX1 (ENSMLEG00000032316) #18	CDX2 (ENSMLEG00000037430) #19	FLT3 (ENSMLEG00000037398) #21	PAN3 (ENSMLEG00000008619) #22	ENSMLEG00000003098	FLT1 (ENSMLEG00000034284) #23	ENSMLEG00000038076	ENSMLEG00000036390	ENSMLEG00000042438	POMP (ENSMLEG00000039576) #24	SLC46A3 (ENSMLEG00000044293) #25	ENSMLEG00000006158 ##27
Vervet Monkey	MODERN SPECIES	22	RNF6 (ENSCSAG00000017991)	CDK8 (ENSCSAG00000017989)	WASF3 (ENSCSAG00000017987) #7	GPR12 (ENSCSAG00000018592) #9	ENSCSAG00000017986 #10	RASL11A (ENSCSAG00000017985) #12	GTF3A (ENSCSAG00000017983) #13	MTIF3 (ENSCSAG00000017982) #14	LNX2 (ENSCSAG00000017981) #15	ENSCSAG00000017980	GSX1 (ENSCSAG00000017979) #17	PDX1 (ENSCSAG00000017977) #18	CDX2 (ENSCSAG00000017976) #19	URAD (ENSCSAG00000017975)	FLT3 (ENSCSAG00000017973) #21	PAN3 (ENSCSAG00000017971) #22	FLT1 (ENSCSAG00000017969) #23	POMP (ENSCSAG00000017967) #24	SLC46A3 (ENSCSAG00000017966) #25	MTUS2 (ENSCSAG00000017964) #27	SLC7A1 (ENSCSAG00000017961) #28	UBL3 (ENSCSAG00000017959) #29	KATNAL1 (ENSCSAG00000017958) #30	USPL1 (ENSCSAG00000017953) #32	ALOX5AP (ENSCSAG00000017950) #33	MEDAG (ENSCSAG00000017948) #34	TEX26 (ENSCSAG00000017946) #35	HSPH1 (ENSCSAG00000017943) #37	B3GLCT (ENSCSAG00000017941)	RXFP2 (ENSCSAG00000017936)	FRY (ENSCSAG00000017926)
Rhinopithecus	ANCESTRAL SPECIES	56	ENSGT00940000165378.d	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160.x #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j.i #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.A.b ##27	ENSGT00910000147174	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000153654	ENSGT00390000002575
Black snub-nosed monkey	MODERN SPECIES	1391	CDK8 (ENSRBIG00000040781)	WASF3 (ENSRBIG00000033396) #7	GPR12 (ENSRBIG00000001744) #9	ENSRBIG00000041212 #10	ENSRBIG00000036802 ##11	RASL11A (ENSRBIG00000043749) #12	GTF3A (ENSRBIG00000044964) #13	MTIF3 (ENSRBIG00000027271) #14	LNX2 (ENSRBIG00000028850) #15	ENSRBIG00000036378 #16	GSX1 (ENSRBIG00000032182) #17	PDX1 (ENSRBIG00000039353) #18	CDX2 (ENSRBIG00000038667) #19	ENSRBIG00000030643 #20	FLT3 (ENSRBIG00000042399) #21	PAN3 (ENSRBIG00000036981) #22	FLT1 (ENSRBIG00000036952) #23	ENSRBIG00000034378	ENSRBIG00000017410	ENSRBIG00000040184	ENSRBIG00000028141 #24	SLC46A3 (ENSRBIG00000039296) #25	ENSRBIG00000043698	MTUS2 (ENSRBIG00000042717) #27	SLC7A1 (ENSRBIG00000030519) #28	ENSRBIG00000024318	UBL3 (ENSRBIG00000032584) #29
Golden snub-nosed monkey	MODERN SPECIES	603										GSX1 (ENSRROG00000032356) #17	PDX1 (ENSRROG00000038796) #18	CDX2 (ENSRROG00000036416) #19	URAD (ENSRROG00000032393)	FLT3 (ENSRROG00000032511) #21	ENSRROG00000038089	PAN3 (ENSRROG00000044835) #22	FLT1 (ENSRROG00000044082) #23	ENSRROG00000044673	ENSRROG00000036924	ENSRROG00000028953	ENSRROG00000035051 #24	SLC46A3 (ENSRROG00000013197) #25	ENSRROG00000029261 ##27
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.b.b ##31	ENSGT00950000183120.e.b.a.a.b.b.b.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.b.b ##31	ENSGT00950000183120.e.b.a.a.b.b.b.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37
Marmoset	MODERN SPECIES	17	ENSCJAG00000073678	ENSCJAG00000069611	ENSCJAG00000044684 ##11	RASL11A (ENSCJAG00000019369) #12	GTF3A (ENSCJAG00000077697) #13	MTIF3 (ENSCJAG00000019378) #14	LNX2 (ENSCJAG00000019379) #15	POLR1D (ENSCJAG00000044669) #16	GSX1 (ENSCJAG00000080181) #17	PDX1 (ENSCJAG00000078316) #18	ENSCJAG00000076582	CDX2 (ENSCJAG00000019398) #19	ENSCJAG00000019404 #20	FLT3 (ENSCJAG00000019405) #21	ENSCJAG00000073991	PAN3 (ENSCJAG00000019421) #22	FLT1 (ENSCJAG00000019447) #23	ENSCJAG00000080582	POMP (ENSCJAG00000019473) #24	SLC46A3 (ENSCJAG00000019491) #25	MTUS2 (ENSCJAG00000019500) #27	ENSCJAG00000072801	SLC7A1 (ENSCJAG00000019515) #28	ENSCJAG00000058143	UBL3 (ENSCJAG00000019517) #29	KATNAL1 (ENSCJAG00000021612) #30	ENSCJAG00000079039	ENSCJAG00000020439 ##31	USPL1 (ENSCJAG00000021616) #32	ALOX5AP (ENSCJAG00000021617) #33	MEDAG (ENSCJAG00000018674) #34
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h.j #10	ENSGT00950000182922.a.a.a.b.b.a.a.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00390000011417.k.d	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.b.b ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37
Capuchin	MODERN SPECIES	103	ENSCCAG00000021328	USP12 (ENSCCAG00000023369) #10	ENSCCAG00000031101 ##11	RASL11A (ENSCCAG00000021842) #12	GTF3A (ENSCCAG00000029730) #13	MTIF3 (ENSCCAG00000036048) #14	ENSCCAG00000026568	LNX2 (ENSCCAG00000020368) #15	ENSCCAG00000021349 #16	GSX1 (ENSCCAG00000025929) #17	PDX1 (ENSCCAG00000036295) #18	CDX2 (ENSCCAG00000025801) #19	ENSCCAG00000029430 #20	FLT3 (ENSCCAG00000022587) #21	ENSCCAG00000027785	PAN3 (ENSCCAG00000021218) #22	ENSCCAG00000000468	FLT1 (ENSCCAG00000035784) #23	POMP (ENSCCAG00000027871) #24	SLC46A3 (ENSCCAG00000025858) #25	MTUS2 (ENSCCAG00000025313) #27	SLC7A1 (ENSCCAG00000000822) #28	CIAPIN1 (ENSCCAG00000020425)	UBL3 (ENSCCAG00000021780) #29	KATNA1 (ENSCCAG00000029984) #30	ENSCCAG00000028011 ##31	ENSCCAG00000032047	REPS2 (ENSCCAG00000024409)	ENSCCAG00000022504	TXLNG (ENSCCAG00000030583)	SYAP1 (ENSCCAG00000034423)
Bolivian squirrel monkey	MODERN SPECIES	42	ENSSBOG00000031441 ##11	RASL11A (ENSSBOG00000025363) #12	GTF3A (ENSSBOG00000002098) #13	MTIF3 (ENSSBOG00000030469) #14	LNX2 (ENSSBOG00000025148) #15	ENSSBOG00000014497	ENSSBOG00000028482 #16	ENSSBOG00000015416	GSX1 (ENSSBOG00000026103) #17	PDX1 (ENSSBOG00000031436) #18	CDX2 (ENSSBOG00000031573) #19	ENSSBOG00000027743 #20	ENSSBOG00000020835	FLT3 (ENSSBOG00000026666) #21	ENSSBOG00000032374	PAN3 (ENSSBOG00000020298) #22	ENSSBOG00000020899	FLT1 (ENSSBOG00000015766) #23	POMP (ENSSBOG00000032229) #24	SLC46A3 (ENSSBOG00000025396) #25	ENSSBOG00000019071	MTUS2 (ENSSBOG00000026505) #27	SLC7A1 (ENSSBOG00000020061) #28	ENSSBOG00000028866	UBL3 (ENSSBOG00000009211) #29	ENSSBOG00000020013	KATNAL1 (ENSSBOG00000009792) #30	ENSSBOG00000023208 ##31	ENSSBOG00000024496	USPL1 (ENSSBOG00000028053) #32	ALOX5AP (ENSSBOG00000035529) #33
Mas night monkey	MODERN SPECIES	331	NUP58 (ENSANAG00000023073)	ENSANAG00000032118 #10	ENSANAG00000023031 ##11	RASL11A (ENSANAG00000027999) #12	GTF3A (ENSANAG00000019293) #13	MTIF3 (ENSANAG00000031630) #14	ENSANAG00000024188	LNX2 (ENSANAG00000028866) #15	POLR1D (ENSANAG00000024486) #16	GSX1 (ENSANAG00000020508) #17	PDX1 (ENSANAG00000033534) #18	CDX2 (ENSANAG00000030392) #19	URAD (ENSANAG00000029018)	FLT3 (ENSANAG00000025242) #21	ENSANAG00000034890	PAN3 (ENSANAG00000028419) #22	ENSANAG00000028102	FLT1 (ENSANAG00000027521) #23	ENSANAG00000035277 #24
Tarsier	MODERN SPECIES	5212														ENSTSYG00000029265 #19	FLT3 (ENSTSYG00000011237) #21	PAN3 (ENSTSYG00000011845) #22	ENSTSYG00000034627	CD2AP (ENSTSYG00000002464)	ENSTSYG00000002476	ADGRF4 (ENSTSYG00000002483)	OPN5 (ENSTSYG00000005962)
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00950000182962.a.a #7	ENSGT01060000248564.b.a.b.a #9	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.b.a.a.a ##11	ENSGT00950000182922.a.a.a.b.a.a.b.b ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b #31	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37	ENSGT00940000155499
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00940000153259.a.a.b.d	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000153284.a.h #10	ENSGT00950000182922.a.a.a.b.b.a.a.a ##11	ENSGT00940000161208 #12	ENSGT00940000155647 #13	ENSGT00390000014424 #14	ENSGT00940000158381 #15	ENSGT00550000075160 #16	ENSGT00940000154361.A #17	ENSGT00940000162542 #18	ENSGT00940000161261 #19	ENSGT00390000002395 #20	ENSGT00940000160575 #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37	ENSGT00940000155499	ENSGT00940000158948.b
Lemuriformes_a	ANCESTRAL SPECIES	41																ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #24	ENSGT00950000183096.a.a.c.b #25	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##31	ENSGT00390000002316 #32	ENSGT00940000158706 #33	ENSGT00390000018451 #34	ENSGT00390000009484 #35	ENSGT00940000159635 #37	ENSGT00940000155499	ENSGT00940000158948.b
Greater bamboo lemur	MODERN SPECIES	560																PAN3 (ENSPSMG00000018171) #22	FLT1 (ENSPSMG00000018075) #23	ENSPSMG00000017984 #24	SLC46A3 (ENSPSMG00000017980) #25	ENSPSMG00000017966 #27	SLC7A1 (ENSPSMG00000017930) #28	UBL3 (ENSPSMG00000017878) #29	KATNAL1 (ENSPSMG00000017845) #30	HMGB1 (ENSPSMG00000017832) ##31	USPL1 (ENSPSMG00000017819) #32	ALOX5AP (ENSPSMG00000017803) #33	MEDAG (ENSPSMG00000017788) #34	TEX26 (ENSPSMG00000017783) #35	HSPH1 (ENSPSMG00000017725) #37
Coquerels sifaka	MODERN SPECIES	251																PAN3 (ENSPCOG00000000176) #22	FLT1 (ENSPCOG00000020203) #23	ENSPCOG00000024553 #24	SLC46A3 (ENSPCOG00000023509) #25	MTUS2 (ENSPCOG00000022249) #27	SLC7A1 (ENSPCOG00000025154) #28	UBL3 (ENSPCOG00000027179) #29	KATNAL1 (ENSPCOG00000022614) #30	ENSPCOG00000013493 ##31	USPL1 (ENSPCOG00000021502) #32	ALOX5AP (ENSPCOG00000016712) #33	MEDAG (ENSPCOG00000020360) #34	TEX26 (ENSPCOG00000022109) #35	ENSPCOG00000027960 #37	B3GLCT (ENSPCOG00000004609)	RXFP2 (ENSPCOG00000011955)
Mouse lemur	MODERN SPECIES	4	SACS (ENSMICG00000034895)	SGCG (ENSMICG00000038162)	ENSMICG00000028275	ENSMICG00000006269 #10	RASL11A (ENSMICG00000029724) #12	GTF3A (ENSMICG00000014763) #13	MTIF3 (ENSMICG00000014777) #14	LNX2 (ENSMICG00000016873) #15	ENSMICG00000016883 #16	GSX1 (ENSMICG00000044124) #17	PDX1 (ENSMICG00000043487) #18	CDX2 (ENSMICG00000031345) #19	ENSMICG00000032881 #20	FLT3 (ENSMICG00000016201) #21	ENSMICG00000027752	PAN3 (ENSMICG00000016237) #22	FLT1 (ENSMICG00000016251) #23	POMP (ENSMICG00000032068) #24	SLC46A3 (ENSMICG00000016295) #25	ENSMICG00000016299 #27	ENSMICG00000032922 #27	SLC7A1 (ENSMICG00000016312) #28	UBL3 (ENSMICG00000033508) #29	KATNAL1 (ENSMICG00000004250) #30	ENSMICG00000007144 #31	USPL1 (ENSMICG00000045622) #32	ALOX5AP (ENSMICG00000001953) #33	MEDAG (ENSMICG00000011156) #34	TEX26 (ENSMICG00000008723) #35	HSPH1 (ENSMICG00000011892) #37	B3GLCT (ENSMICG00000011910)
Bushbaby	MODERN SPECIES	235	GPR12 (ENSOGAG00000006144) #9	USP12 (ENSOGAG00000030639) #10	ENSOGAG00000030191	ENSOGAG00000008181 ##11	RASL11A (ENSOGAG00000008177) #12	GTF3A (ENSOGAG00000014589) #13	MTIF3 (ENSOGAG00000014597) #14	LNX2 (ENSOGAG00000014599) #15	POLR1D (ENSOGAG00000014601) #16	GSX1 (ENSOGAG00000011242) #17	PDX1 (ENSOGAG00000016688) #18	CDX2 (ENSOGAG00000026117) #19	ENSOGAG00000016692 #20	FLT3 (ENSOGAG00000016694) #21	ENSOGAG00000031357	PAN3 (ENSOGAG00000014604) #22	FLT1 (ENSOGAG00000014611) #23	POMP (ENSOGAG00000006044) #24	SLC46A3 (ENSOGAG00000006042) #25	MTUS2 (ENSOGAG00000010807) #27	SLC7A1 (ENSOGAG00000010813) #28	UBL3 (ENSOGAG00000004035) #29	KATNAL1 (ENSOGAG00000011308) #30	ENSOGAG00000003205 #31	ENSOGAG00000030054	ENSOGAG00000026314	USPL1 (ENSOGAG00000015490) #32	ALOX5AP (ENSOGAG00000015495) #33	MEDAG (ENSOGAG00000034882) #34	TEX26 (ENSOGAG00000006834) #35	HSPH1 (ENSOGAG00000009898) #37