Theria	ANCESTRAL SPECIES	1	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Eutheria	ANCESTRAL SPECIES	17	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Primates	ANCESTRAL SPECIES	29	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499
Haplorrhini	ANCESTRAL SPECIES	43	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00950000183120.e.b.a.a.b.b.b.b ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499
Catarrhini	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000155828.o.a #31	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153783.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000155828.o.a #31	ENSGT00940000156630 #30	ENSGT00940000154686.g.b	ENSGT00390000002316 #34
Macaca	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093 #24	ENSGT00940000153783.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00950000183120.e.b.a.b #33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000153284.a.h.i.a	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a #7	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT01100000263493.a.b.a.a.b.a.b.b #12	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000147093 #24	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00950000183120.e.b.a.b #33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635
Crab-eating macaque	MODERN SPECIES	8	ENSMFAG00000062305 #7	ENSMFAG00000053340 #8	RASL11A (ENSMFAG00000044628) #9	GTF3A (ENSMFAG00000044837) #10	MTIF3 (ENSMFAG00000045045) #11	ENSMFAG00000050995 #12	LNX2 (ENSMFAG00000045245) #13	ENSMFAG00000045264 #14	GSX1 (ENSMFAG00000037158) #15	PDX1 (ENSMFAG00000063371) #16	CDX2 (ENSMFAG00000051158) #17	URAD (ENSMFAG00000043442) #18	FLT3 (ENSMFAG00000044854) #19	ENSMFAG00000052223 #20	ENSMFAG00000063510 #21	PAN3 (ENSMFAG00000025538) #22	FLT1 (ENSMFAG00000035718) #23	ENSMFAG00000039222 #24	POMP (ENSMFAG00000025369) #25	SLC46A3 (ENSMFAG00000030072) #26	MTUS2 (ENSMFAG00000032200) #27	SLC7A1 (ENSMFAG00000043457) #28	UBL3 (ENSMFAG00000044955) #29	KATNAL1 (ENSMFAG00000053013) #30	ENSMFAG00000053527 #31	UBE2L5 (ENSMFAG00000045697) #32	ENSMFAG00000030905 #33	USPL1 (ENSMFAG00000032370) #34	ALOX5AP (ENSMFAG00000032586) #35	MEDAG (ENSMFAG00000035649) #36	TEX26 (ENSMFAG00000035671) #37
Rhesus	MODERN SPECIES	8	ENSMMUG00000050226 ##12	USP12 (ENSMMUG00000021425)	ENSMMUG00000054994 #7	ENSMMUG00000058755 ##8	RASL11A (ENSMMUG00000049650) #9	GTF3A (ENSMMUG00000009029) #10	MTIF3 (ENSMMUG00000009030) #11	ENSMMUG00000059867 #12	LNX2 (ENSMMUG00000058786) #13	POLR1D (ENSMMUG00000020386) #14	GSX1 (ENSMMUG00000004507) #15	PDX1 (ENSMMUG00000064615) #16	CDX2 (ENSMMUG00000052070) #17	URAD (ENSMMUG00000016138) #18	FLT3 (ENSMMUG00000016139) #19	PAN3 (ENSMMUG00000022522) #22	FLT1 (ENSMMUG00000021538) #23	ENSMMUG00000063649 #24	POMP (ENSMMUG00000058998) #25	SLC46A3 (ENSMMUG00000013721) #26	MTUS2 (ENSMMUG00000008658) #27	SLC7A1 (ENSMMUG00000008661) #28	UBL3 (ENSMMUG00000003771) #29	KATNAL1 (ENSMMUG00000004922) #30	UBE2L5 (ENSMMUG00000008940) #32	ENSMMUG00000058466 ##12	HMGB1 (ENSMMUG00000046615) ##33	ENSMMUG00000052770 ##12	USPL1 (ENSMMUG00000007597) #34	ALOX5AP (ENSMMUG00000005572) #35	ENSMMUG00000053993 ##12
Pig-tailed macaque	MODERN SPECIES	165	GPR12 (ENSMNEG00000010974)	ENSMNEG00000039505	ENSMNEG00000034115 #8	RASL11A (ENSMNEG00000033345) #9	GTF3A (ENSMNEG00000043473) #10	MTIF3 (ENSMNEG00000032443) #11	LNX2 (ENSMNEG00000040860) #13	ENSMNEG00000034652	ENSMNEG00000008630	GSX1 (ENSMNEG00000032682) #15	PDX1 (ENSMNEG00000032095) #16	CDX2 (ENSMNEG00000043440) #17	URAD (ENSMNEG00000045421) #18	FLT3 (ENSMNEG00000032442) #19	ENSMNEG00000043801 #21	PAN3 (ENSMNEG00000032817) #22	FLT1 (ENSMNEG00000032149) #23	ENSMNEG00000028177 #24	ENSMNEG00000043904	POMP (ENSMNEG00000031404) #25	SLC46A3 (ENSMNEG00000038996) #26	MTUS2 (ENSMNEG00000039238) #27	SLC7A1 (ENSMNEG00000044453) #28	SLC5A7 (ENSMNEG00000039266)	ENSMNEG00000022050	ST6GAL2 (ENSMNEG00000036708)	ENSMNEG00000019179	ENSMNEG00000044732	UXS1 (ENSMNEG00000040004)	ECRG4 (ENSMNEG00000043594)	NCK2 (ENSMNEG00000039028)
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153783.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000155828.o.a #31	ENSGT00940000156630 #30	ENSGT00940000154686.g.b	ENSGT00390000002316 #34
Olive baboon	MODERN SPECIES	6	GPR12 (ENSPANG00000003061)	USP12 (ENSPANG00000011533)	ENSPANG00000011984 ##8	RASL11A (ENSPANG00000044196) #9	GTF3A (ENSPANG00000012593) #10	MTIF3 (ENSPANG00000005047) #11	LNX2 (ENSPANG00000012983) #13	ENSPANG00000020259	ENSPANG00000038544	GSX1 (ENSPANG00000017129) #15	ENSPANG00000047094	PDX1 (ENSPANG00000012683) #16	CDX2 (ENSPANG00000050183) #17	URAD (ENSPANG00000014018) #18	FLT3 (ENSPANG00000009315) #19	PAN3 (ENSPANG00000001988) #22	FLT1 (ENSPANG00000009892) #23	ENSPANG00000044787	POMP (ENSPANG00000046275) #25	SLC46A3 (ENSPANG00000020218) #26	MTUS2 (ENSPANG00000013682) #27	SLC7A1 (ENSPANG00000012138) #28	UBL3 (ENSPANG00000008471) #29	KATNAL1 (ENSPANG00000023364) #30	UBE2L5 (ENSPANG00000043221) #32	HMGB1 (ENSPANG00000007200) ##33	USPL1 (ENSPANG00000005488) #34	ALOX5AP (ENSPANG00000020217) #35	MEDAG (ENSPANG00000021857) #36	TEX26 (ENSPANG00000012755) #37	HSPH1 (ENSPANG00000012232)
Cercopithecinae_d	ANCESTRAL SPECIES	93	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00910000147903	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00910000147887	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153783.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031
Sooty mangabey	MODERN SPECIES	255	ENSCATG00000018180	ENSCATG00000038452	ENSCATG00000032591 ##8	RASL11A (ENSCATG00000033838) #9	GTF3A (ENSCATG00000032361) #10	MTIF3 (ENSCATG00000007775) #11	LNX2 (ENSCATG00000035354) #13	ENSCATG00000030710	ENSCATG00000002488	GSX1 (ENSCATG00000028004) #15	PDX1 (ENSCATG00000035793) #16	CDX2 (ENSCATG00000007363) #17	URAD (ENSCATG00000007826) #18	FLT3 (ENSCATG00000014529) #19	ENSCATG00000032726 #21	PAN3 (ENSCATG00000030893) #22	FLT1 (ENSCATG00000034541) #23	ENSCATG00000024438	ENSCATG00000028829 #24	ENSCATG00000033485	POMP (ENSCATG00000037462) #25	SLC46A3 (ENSCATG00000021488) #26	MTUS2 (ENSCATG00000041831) #27	ENSCATG00000037549	SLC7A1 (ENSCATG00000025899) #28	ENSCATG00000034802
Drill	MODERN SPECIES	1324	RNF6 (ENSMLEG00000038569)	CDK8 (ENSMLEG00000040071)	WASF3 (ENSMLEG00000040168)	GPR12 (ENSMLEG00000002545)	ENSMLEG00000033598	ENSMLEG00000024280 ##8	RASL11A (ENSMLEG00000036089) #9	GTF3A (ENSMLEG00000039703) #10	MTIF3 (ENSMLEG00000039110) #11	LNX2 (ENSMLEG00000039062) #13	ENSMLEG00000041048	ENSMLEG00000041805	PDX1 (ENSMLEG00000032316) #16	CDX2 (ENSMLEG00000037430) #17	FLT3 (ENSMLEG00000037398) #19	PAN3 (ENSMLEG00000008619) #22	ENSMLEG00000003098	FLT1 (ENSMLEG00000034284) #23	ENSMLEG00000038076	ENSMLEG00000036390 #24	ENSMLEG00000042438	POMP (ENSMLEG00000039576) #25	SLC46A3 (ENSMLEG00000044293) #26	ENSMLEG00000006158 ##27
Vervet Monkey	MODERN SPECIES	22	RNF6 (ENSCSAG00000017991)	CDK8 (ENSCSAG00000017989)	WASF3 (ENSCSAG00000017987)	GPR12 (ENSCSAG00000018592)	ENSCSAG00000017986	RASL11A (ENSCSAG00000017985) #9	GTF3A (ENSCSAG00000017983) #10	MTIF3 (ENSCSAG00000017982) #11	LNX2 (ENSCSAG00000017981) #13	ENSCSAG00000017980 #14	GSX1 (ENSCSAG00000017979) #15	PDX1 (ENSCSAG00000017977) #16	CDX2 (ENSCSAG00000017976) #17	URAD (ENSCSAG00000017975) #18	FLT3 (ENSCSAG00000017973) #19	PAN3 (ENSCSAG00000017971) #22	FLT1 (ENSCSAG00000017969) #23	POMP (ENSCSAG00000017967) #25	SLC46A3 (ENSCSAG00000017966) #26	MTUS2 (ENSCSAG00000017964) #27	SLC7A1 (ENSCSAG00000017961) #28	UBL3 (ENSCSAG00000017959) #29	KATNAL1 (ENSCSAG00000017958) #30	USPL1 (ENSCSAG00000017953) #34	ALOX5AP (ENSCSAG00000017950) #35	MEDAG (ENSCSAG00000017948) #36	TEX26 (ENSCSAG00000017946) #37	HSPH1 (ENSCSAG00000017943)	B3GLCT (ENSCSAG00000017941)	RXFP2 (ENSCSAG00000017936)	FRY (ENSCSAG00000017926)
Rhinopithecus	ANCESTRAL SPECIES	56	ENSGT00940000165378.d	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j.i #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.A.b ##27	ENSGT00910000147174	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000153654 #32	ENSGT00390000002575
Black snub-nosed monkey	MODERN SPECIES	1391	CDK8 (ENSRBIG00000040781)	WASF3 (ENSRBIG00000033396)	GPR12 (ENSRBIG00000001744)	ENSRBIG00000041212	ENSRBIG00000036802 #8	RASL11A (ENSRBIG00000043749) #9	GTF3A (ENSRBIG00000044964) #10	MTIF3 (ENSRBIG00000027271) #11	LNX2 (ENSRBIG00000028850) #13	ENSRBIG00000036378	GSX1 (ENSRBIG00000032182) #15	PDX1 (ENSRBIG00000039353) #16	CDX2 (ENSRBIG00000038667) #17	ENSRBIG00000030643	FLT3 (ENSRBIG00000042399) #19	PAN3 (ENSRBIG00000036981) #22	FLT1 (ENSRBIG00000036952) #23	ENSRBIG00000034378	ENSRBIG00000017410 #24	ENSRBIG00000040184	ENSRBIG00000028141 #25	SLC46A3 (ENSRBIG00000039296) #26	ENSRBIG00000043698	MTUS2 (ENSRBIG00000042717) #27	SLC7A1 (ENSRBIG00000030519) #28	ENSRBIG00000024318	UBL3 (ENSRBIG00000032584) #29
Golden snub-nosed monkey	MODERN SPECIES	603										GSX1 (ENSRROG00000032356) #15	PDX1 (ENSRROG00000038796) #16	CDX2 (ENSRROG00000036416) #17	URAD (ENSRROG00000032393) #18	FLT3 (ENSRROG00000032511) #19	ENSRROG00000038089	PAN3 (ENSRROG00000044835) #22	FLT1 (ENSRROG00000044082) #23	ENSRROG00000044673	ENSRROG00000036924 #24	ENSRROG00000028953	ENSRROG00000035051 #25	SLC46A3 (ENSRROG00000013197) #26	ENSRROG00000029261 ##27
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00910000147093 #24	ENSGT00940000153889.e.b.a.d.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00940000154686.g.b
Hominidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00440000038159.p.b #21	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00950000183120.e.b.a.a.b.b.b.b ##33	ENSGT00390000002316 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00950000183203.d.h	ENSGT00940000153654.ub #32
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00950000183203.d.h	ENSGT00940000153654.ub #32
Pan	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160.x	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00390000015470.z.b	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00910000146937	ENSGT00940000153889.f	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00930000151026.f	ENSGT00950000183026.B #27	ENSGT00910000147174	ENSGT00940000155349 #28	ENSGT00910000148031	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00940000155828.o.a #31	ENSGT00950000183203.d.h
Chimpanzee	MODERN SPECIES	4	GPR12 (ENSPTRG00000046989)	USP12 (ENSPTRG00000005727)	RPL21 (ENSPTRG00000005728) #8	RASL11A (ENSPTRG00000005729) #9	GTF3A (ENSPTRG00000005730) #10	MTIF3 (ENSPTRG00000005732) #11	LNX2 (ENSPTRG00000005733) #13	POLR1D (ENSPTRG00000005734)	GSX1 (ENSPTRG00000005735) #15	PDX1 (ENSPTRG00000005736) #16	ENSPTRG00000005737	CDX2 (ENSPTRG00000043330) #17	URAD (ENSPTRG00000005739) #18	FLT3 (ENSPTRG00000005740) #19	ENSPTRG00000046829	PAN3 (ENSPTRG00000005742) #22	FLT1 (ENSPTRG00000005743) #23	ENSPTRG00000045890	ENSPTRG00000046663	POMP (ENSPTRG00000005745) #25	SLC46A3 (ENSPTRG00000005746) #26	ENSPTRG00000045489	MTUS2 (ENSPTRG00000005747) #27	ENSPTRG00000046056	SLC7A1 (ENSPTRG00000005750) #28	ENSPTRG00000049804	UBL3 (ENSPTRG00000005751) #29	KATNAL1 (ENSPTRG00000005753) #30	ENSPTRG00000044243 #31	UBE2L5 (ENSPTRG00000050842) #32	ENSPTRG00000048008 ##33
Bonobo	MODERN SPECIES	4	CDK8 (ENSPPAG00000035126)	WASF3 (ENSPPAG00000035699)	GPR12 (ENSPPAG00000007707)	ENSPPAG00000007246	ENSPPAG00000042860 #8	RASL11A (ENSPPAG00000027996) #9	GTF3A (ENSPPAG00000034725) #10	MTIF3 (ENSPPAG00000027304) #11	LNX2 (ENSPPAG00000027444) #13	ENSPPAG00000028138	GSX1 (ENSPPAG00000032556) #15	ENSPPAG00000032720 #16	ENSPPAG00000032440	CDX2 (ENSPPAG00000032963) #17	FLT3 (ENSPPAG00000015701) #19	PAN3 (ENSPPAG00000027826) #22	ENSPPAG00000030264	ENSPPAG00000033250 #23	ENSPPAG00000027416	POMP (ENSPPAG00000036286) #25	SLC46A3 (ENSPPAG00000035795) #26	ENSPPAG00000027903	MTUS2 (ENSPPAG00000032687) #27	ENSPPAG00000034238	SLC7A1 (ENSPPAG00000037016) #28	ENSPPAG00000015303	UBL3 (ENSPPAG00000027496) #29	KATNAL1 (ENSPPAG00000033530) #30	ENSPPAG00000037440 #31	UBE2L5 (ENSPPAG00000032233) #32	ENSPPAG00000030148 ##33
Human	MODERN SPECIES	4	CDK8 (ENSG00000132964)	WASF3 (ENSG00000132970)	GPR12 (ENSG00000132975)	USP12 (ENSG00000152484)	RPL21 (ENSG00000122026) ##8	RASL11A (ENSG00000122035) #9	GTF3A (ENSG00000122034) #10	MTIF3 (ENSG00000122033) #11	LNX2 (ENSG00000139517) #13	POLR1D (ENSG00000186184)	GSX1 (ENSG00000169840) #15	PDX1 (ENSG00000139515) #16	CDX2 (ENSG00000165556) #17	URAD (ENSG00000183463) #18	FLT3 (ENSG00000122025) #19	PAN3 (ENSG00000152520) #22	FLT1 (ENSG00000102755) #23	POMP (ENSG00000132963) #25	SLC46A3 (ENSG00000139508) #26	MTUS2 (ENSG00000132938) #27	SLC7A1 (ENSG00000139514) #28	UBL3 (ENSG00000122042) #29	KATNAL1 (ENSG00000102781) #30	UBE2L5 (ENSG00000236444) #32	HMGB1 (ENSG00000189403) ##33	USPL1 (ENSG00000132952) #34	ALOX5AP (ENSG00000132965) #35	MEDAG (ENSG00000102802) #36	TEX26 (ENSG00000175664) #37	HSPH1 (ENSG00000120694)	B3GLCT (ENSG00000187676)
Gorilla	MODERN SPECIES	4	CDK8 (ENSGGOG00000006569)	WASF3 (ENSGGOG00000012518)	GPR12 (ENSGGOG00000000849)	ENSGGOG00000011358	ENSGGOG00000003002 #8	RASL11A (ENSGGOG00000008785) #9	GTF3A (ENSGGOG00000008407) #10	MTIF3 (ENSGGOG00000041079) #11	LNX2 (ENSGGOG00000016167) #13	POLR1D (ENSGGOG00000004235)	GSX1 (ENSGGOG00000005011) #15	PDX1 (ENSGGOG00000002569) #16	CDX2 (ENSGGOG00000005487) #17	URAD (ENSGGOG00000005489) #18	FLT3 (ENSGGOG00000000882) #19	PAN3 (ENSGGOG00000016079) #22	FLT1 (ENSGGOG00000008750) #23	ENSGGOG00000036812	ENSGGOG00000036780	POMP (ENSGGOG00000015316) #25	SLC46A3 (ENSGGOG00000014254) #26	ENSGGOG00000042729	UBL3 (ENSGGOG00000023146) #29	KATNAL1 (ENSGGOG00000026875) #30	ENSGGOG00000024714 #31	UBE2L5 (ENSGGOG00000006857) #32	HMGB1 (ENSGGOG00000026764) ##33	USPL1 (ENSGGOG00000004673) #34	ENSGGOG00000013859 #35	MEDAG (ENSGGOG00000009867) #36	TEX26 (ENSGGOG00000016812) #37
Orangutan	MODERN SPECIES	4	GPR12 (ENSPPYG00000005231)	USP12 (ENSPPYG00000005232)	RPL21 (ENSPPYG00000005233) ##8	RASL11A (ENSPPYG00000005234) #9	GTF3A (ENSPPYG00000005235) #10	MTIF3 (ENSPPYG00000005236) #11	LNX2 (ENSPPYG00000005237) #13	ENSPPYG00000005238 #14	GSX1 (ENSPPYG00000005239) #15	PDX1 (ENSPPYG00000005240) #16	ENSPPYG00000005241	CDX2 (ENSPPYG00000005242) #17	URAD (ENSPPYG00000005243) #18	FLT3 (ENSPPYG00000005244) #19	ENSPPYG00000040072 #21	PAN3 (ENSPPYG00000005245) #22	FLT1 (ENSPPYG00000005246) #23	ENSPPYG00000034417	ENSPPYG00000038952	POMP (ENSPPYG00000005247) #25	SLC46A3 (ENSPPYG00000005248) #26	MTUS2 (ENSPPYG00000005249) #27	SLC7A1 (ENSPPYG00000005250) #28	ENSPPYG00000034870	UBL3 (ENSPPYG00000037129) #29	KATNAL1 (ENSPPYG00000005253) #30	ENSPPYG00000031030 #31	UBE2L5 (ENSPPYG00000005254) #32	ENSPPYG00000030447 ##33	USPL1 (ENSPPYG00000005543) #34	ENSPPYG00000005255 #35
Gibbon	MODERN SPECIES	24	ATP2B4 (ENSNLEG00000018117)	ENSNLEG00000000323	ENSNLEG00000000327 ##8	RASL11A (ENSNLEG00000000329) #9	GTF3A (ENSNLEG00000000331) #10	MTIF3 (ENSNLEG00000000343) #11	LNX2 (ENSNLEG00000000345) #13	ENSNLEG00000000358	GSX1 (ENSNLEG00000000360) #15	PDX1 (ENSNLEG00000000362) #16	CDX2 (ENSNLEG00000000365) #17	URAD (ENSNLEG00000000369) #18	FLT3 (ENSNLEG00000000372) #19	ENSNLEG00000035718 #21	ENSNLEG00000029210	PAN3 (ENSNLEG00000000388) #22	FLT1 (ENSNLEG00000000456) #23	ENSNLEG00000030098	ENSNLEG00000033802 #24	ENSNLEG00000000571	POMP (ENSNLEG00000000572) #25	SLC46A3 (ENSNLEG00000000599) #26	ENSNLEG00000000618 #27	ENSNLEG00000033304	ENSNLEG00000035615 #27	SLC7A1 (ENSNLEG00000000622) #28	UBL3 (ENSNLEG00000000660) #29	KATNAL1 (ENSNLEG00000000679) #30	ENSNLEG00000000717	UBE2L5 (ENSNLEG00000018657) #32	ENSNLEG00000000720 ##33
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.b.b ##33	ENSGT00950000183120.e.b.a.a.b.b.b.b ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.b.b ##33	ENSGT00950000183120.e.b.a.a.b.b.b.b ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635
Marmoset	MODERN SPECIES	17	ENSCJAG00000073678	ENSCJAG00000069611	ENSCJAG00000044684 ##8	RASL11A (ENSCJAG00000019369) #9	GTF3A (ENSCJAG00000077697) #10	MTIF3 (ENSCJAG00000019378) #11	LNX2 (ENSCJAG00000019379) #13	POLR1D (ENSCJAG00000044669)	GSX1 (ENSCJAG00000080181) #15	PDX1 (ENSCJAG00000078316) #16	ENSCJAG00000076582	CDX2 (ENSCJAG00000019398) #17	ENSCJAG00000019404	FLT3 (ENSCJAG00000019405) #19	ENSCJAG00000073991	PAN3 (ENSCJAG00000019421) #22	FLT1 (ENSCJAG00000019447) #23	ENSCJAG00000080582	POMP (ENSCJAG00000019473) #25	SLC46A3 (ENSCJAG00000019491) #26	MTUS2 (ENSCJAG00000019500) #27	ENSCJAG00000072801	SLC7A1 (ENSCJAG00000019515) #28	ENSCJAG00000058143	UBL3 (ENSCJAG00000019517) #29	KATNAL1 (ENSCJAG00000021612) #30	ENSCJAG00000079039 #32	ENSCJAG00000020439 ##33	USPL1 (ENSCJAG00000021616) #34	ALOX5AP (ENSCJAG00000021617) #35	MEDAG (ENSCJAG00000018674) #36
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h.j	ENSGT00950000182922.a.a.a.b.b.a.a.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00950000182965.a.b.b.b.g.a	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00390000011417.k.d	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.b.b ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635
Capuchin	MODERN SPECIES	103	ENSCCAG00000021328	USP12 (ENSCCAG00000023369)	ENSCCAG00000031101 ##8	RASL11A (ENSCCAG00000021842) #9	GTF3A (ENSCCAG00000029730) #10	MTIF3 (ENSCCAG00000036048) #11	ENSCCAG00000026568	LNX2 (ENSCCAG00000020368) #13	ENSCCAG00000021349	GSX1 (ENSCCAG00000025929) #15	PDX1 (ENSCCAG00000036295) #16	CDX2 (ENSCCAG00000025801) #17	ENSCCAG00000029430	FLT3 (ENSCCAG00000022587) #19	ENSCCAG00000027785	PAN3 (ENSCCAG00000021218) #22	ENSCCAG00000000468	FLT1 (ENSCCAG00000035784) #23	POMP (ENSCCAG00000027871) #25	SLC46A3 (ENSCCAG00000025858) #26	MTUS2 (ENSCCAG00000025313) #27	SLC7A1 (ENSCCAG00000000822) #28	CIAPIN1 (ENSCCAG00000020425)	UBL3 (ENSCCAG00000021780) #29	KATNA1 (ENSCCAG00000029984) #30	ENSCCAG00000028011 ##33	ENSCCAG00000032047	REPS2 (ENSCCAG00000024409)	ENSCCAG00000022504	TXLNG (ENSCCAG00000030583)	SYAP1 (ENSCCAG00000034423)
Bolivian squirrel monkey	MODERN SPECIES	42	ENSSBOG00000031441 ##8	RASL11A (ENSSBOG00000025363) #9	GTF3A (ENSSBOG00000002098) #10	MTIF3 (ENSSBOG00000030469) #11	LNX2 (ENSSBOG00000025148) #13	ENSSBOG00000014497	ENSSBOG00000028482	ENSSBOG00000015416	GSX1 (ENSSBOG00000026103) #15	PDX1 (ENSSBOG00000031436) #16	CDX2 (ENSSBOG00000031573) #17	ENSSBOG00000027743	ENSSBOG00000020835	FLT3 (ENSSBOG00000026666) #19	ENSSBOG00000032374	PAN3 (ENSSBOG00000020298) #22	ENSSBOG00000020899	FLT1 (ENSSBOG00000015766) #23	POMP (ENSSBOG00000032229) #25	SLC46A3 (ENSSBOG00000025396) #26	ENSSBOG00000019071	MTUS2 (ENSSBOG00000026505) #27	SLC7A1 (ENSSBOG00000020061) #28	ENSSBOG00000028866	UBL3 (ENSSBOG00000009211) #29	ENSSBOG00000020013	KATNAL1 (ENSSBOG00000009792) #30	ENSSBOG00000023208 #33	ENSSBOG00000024496	USPL1 (ENSSBOG00000028053) #34	ALOX5AP (ENSSBOG00000035529) #35
Mas night monkey	MODERN SPECIES	331	NUP58 (ENSANAG00000023073)	ENSANAG00000032118	ENSANAG00000023031 ##8	RASL11A (ENSANAG00000027999) #9	GTF3A (ENSANAG00000019293) #10	MTIF3 (ENSANAG00000031630) #11	ENSANAG00000024188	LNX2 (ENSANAG00000028866) #13	POLR1D (ENSANAG00000024486)	GSX1 (ENSANAG00000020508) #15	PDX1 (ENSANAG00000033534) #16	CDX2 (ENSANAG00000030392) #17	URAD (ENSANAG00000029018) #18	FLT3 (ENSANAG00000025242) #19	ENSANAG00000034890	PAN3 (ENSANAG00000028419) #22	ENSANAG00000028102	FLT1 (ENSANAG00000027521) #23	ENSANAG00000035277 #25
Tarsier	MODERN SPECIES	5212														ENSTSYG00000029265 #17	FLT3 (ENSTSYG00000011237) #19	PAN3 (ENSTSYG00000011845) #22	ENSTSYG00000034627	CD2AP (ENSTSYG00000002464)	ENSTSYG00000002476	ADGRF4 (ENSTSYG00000002483)	OPN5 (ENSTSYG00000005962)
Strepsirrhini	ANCESTRAL SPECIES	41	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.b.a.a.a ##8	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b ##33	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00940000153259.a.a.b.d	ENSGT00390000016695	ENSGT00940000159187	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.b.a.a.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Lemuriformes_a	ANCESTRAL SPECIES	41																ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Greater bamboo lemur	MODERN SPECIES	560																PAN3 (ENSPSMG00000018171) #22	FLT1 (ENSPSMG00000018075) #23	ENSPSMG00000017984 #25	SLC46A3 (ENSPSMG00000017980) #26	ENSPSMG00000017966 #27	SLC7A1 (ENSPSMG00000017930) #28	UBL3 (ENSPSMG00000017878) #29	KATNAL1 (ENSPSMG00000017845) #30	HMGB1 (ENSPSMG00000017832) ##33	USPL1 (ENSPSMG00000017819) #34	ALOX5AP (ENSPSMG00000017803) #35	MEDAG (ENSPSMG00000017788) #36	TEX26 (ENSPSMG00000017783) #37	HSPH1 (ENSPSMG00000017725)
Coquerels sifaka	MODERN SPECIES	251																PAN3 (ENSPCOG00000000176) #22	FLT1 (ENSPCOG00000020203) #23	ENSPCOG00000024553 #25	SLC46A3 (ENSPCOG00000023509) #26	MTUS2 (ENSPCOG00000022249) #27	SLC7A1 (ENSPCOG00000025154) #28	UBL3 (ENSPCOG00000027179) #29	KATNAL1 (ENSPCOG00000022614) #30	ENSPCOG00000013493 ##33	USPL1 (ENSPCOG00000021502) #34	ALOX5AP (ENSPCOG00000016712) #35	MEDAG (ENSPCOG00000020360) #36	TEX26 (ENSPCOG00000022109) #37	ENSPCOG00000027960	B3GLCT (ENSPCOG00000004609)	RXFP2 (ENSPCOG00000011955)
Mouse lemur	MODERN SPECIES	4	SACS (ENSMICG00000034895)	SGCG (ENSMICG00000038162)	ENSMICG00000028275	ENSMICG00000006269	RASL11A (ENSMICG00000029724) #9	GTF3A (ENSMICG00000014763) #10	MTIF3 (ENSMICG00000014777) #11	LNX2 (ENSMICG00000016873) #13	ENSMICG00000016883	GSX1 (ENSMICG00000044124) #15	PDX1 (ENSMICG00000043487) #16	CDX2 (ENSMICG00000031345) #17	ENSMICG00000032881	FLT3 (ENSMICG00000016201) #19	ENSMICG00000027752	PAN3 (ENSMICG00000016237) #22	FLT1 (ENSMICG00000016251) #23	POMP (ENSMICG00000032068) #25	SLC46A3 (ENSMICG00000016295) #26	ENSMICG00000016299 #27	ENSMICG00000032922 #27	SLC7A1 (ENSMICG00000016312) #28	UBL3 (ENSMICG00000033508) #29	KATNAL1 (ENSMICG00000004250) #30	ENSMICG00000007144 ##33	USPL1 (ENSMICG00000045622) #34	ALOX5AP (ENSMICG00000001953) #35	MEDAG (ENSMICG00000011156) #36	TEX26 (ENSMICG00000008723) #37	HSPH1 (ENSMICG00000011892)	B3GLCT (ENSMICG00000011910)
Bushbaby	MODERN SPECIES	235	GPR12 (ENSOGAG00000006144)	USP12 (ENSOGAG00000030639)	ENSOGAG00000030191	ENSOGAG00000008181 ##8	RASL11A (ENSOGAG00000008177) #9	GTF3A (ENSOGAG00000014589) #10	MTIF3 (ENSOGAG00000014597) #11	LNX2 (ENSOGAG00000014599) #13	POLR1D (ENSOGAG00000014601)	GSX1 (ENSOGAG00000011242) #15	PDX1 (ENSOGAG00000016688) #16	CDX2 (ENSOGAG00000026117) #17	ENSOGAG00000016692	FLT3 (ENSOGAG00000016694) #19	ENSOGAG00000031357	PAN3 (ENSOGAG00000014604) #22	FLT1 (ENSOGAG00000014611) #23	POMP (ENSOGAG00000006044) #25	SLC46A3 (ENSOGAG00000006042) #26	MTUS2 (ENSOGAG00000010807) #27	SLC7A1 (ENSOGAG00000010813) #28	UBL3 (ENSOGAG00000004035) #29	KATNAL1 (ENSOGAG00000011308) #30	ENSOGAG00000003205 ##33	ENSOGAG00000030054	ENSOGAG00000026314	USPL1 (ENSOGAG00000015490) #34	ALOX5AP (ENSOGAG00000015495) #35	MEDAG (ENSOGAG00000034882) #36	TEX26 (ENSOGAG00000006834) #37	HSPH1 (ENSOGAG00000009898)
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Glires	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Rodentia	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647.c #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647.c #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647.c #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.p #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Degu	MODERN SPECIES	79	GPR12 (ENSODEG00000006388)	USP12 (ENSODEG00000006744)	ENSODEG00000005022 ##8	RASL11A (ENSODEG00000005775) #9	GTF3A (ENSODEG00000006725) #10	MTIF3 (ENSODEG00000006818) #11	LNX2 (ENSODEG00000006222) #13	ENSODEG00000005294	ENSODEG00000006454	GSX1 (ENSODEG00000005135) #15	ENSODEG00000019134	PDX1 (ENSODEG00000005235) #16	CDX2 (ENSODEG00000007340) #17	ENSODEG00000007620	FLT3 (ENSODEG00000007884) #19	PAN3 (ENSODEG00000005038) #22	ENSODEG00000006016	ENSODEG00000006274 #23	ENSODEG00000005111 #25	ENSODEG00000005569	SLC46A3 (ENSODEG00000006238) #26	ENSODEG00000006635	ENSODEG00000005871 #27	SLC7A1 (ENSODEG00000005306) #28	ENSODEG00000005438	UBL3 (ENSODEG00000005571) #29	KATNAL1 (ENSODEG00000005926) #30	ENSODEG00000006120 ##33	USPL1 (ENSODEG00000007176) #34	ALOX5AP (ENSODEG00000005645) #35	MEDAG (ENSODEG00000005967) #36
Long-tailed chinchilla	MODERN SPECIES	204	CDK8 (ENSCLAG00000003311)	WASF3 (ENSCLAG00000003372)	GPR12 (ENSCLAG00000003409)	USP12 (ENSCLAG00000003543)	Rpl21 (ENSCLAG00000003656) #8	RASL11A (ENSCLAG00000003867) #9	GTF3A (ENSCLAG00000003912) #10	MTIF3 (ENSCLAG00000004080) #11	LNX2 (ENSCLAG00000004148) #13	POLR1D (ENSCLAG00000017623)	ENSCLAG00000004320 #14	GSX1 (ENSCLAG00000004357) #15	PDX1 (ENSCLAG00000006652) #16	CDX2 (ENSCLAG00000006810) #17	FLT3 (ENSCLAG00000007093) #19	PAN3 (ENSCLAG00000007575) #22	FLT1 (ENSCLAG00000008187) #23	POMP (ENSCLAG00000008609) #25	SLC46A3 (ENSCLAG00000009379) #26
Guinea pig	MODERN SPECIES	6	RNF6 (ENSCPOG00000009120)	CDK8 (ENSCPOG00000040435)	WASF3 (ENSCPOG00000010156)	ENSCPOG00000020112	USP12 (ENSCPOG00000005241)	ENSCPOG00000008784 ##8	RASL11A (ENSCPOG00000031264) #9	GTF3A (ENSCPOG00000010143) #10	MTIF3 (ENSCPOG00000010148) #11	LNX2 (ENSCPOG00000010152) #13	ENSCPOG00000033461 #14	ENSCPOG00000026854	PDX1 (ENSCPOG00000024534) #16	CDX2 (ENSCPOG00000007276) #17	FLT3 (ENSCPOG00000007285) #19	PAN3 (ENSCPOG00000013349) #22	FLT1 (ENSCPOG00000013357) #23	POMP (ENSCPOG00000001710) #25	SLC46A3 (ENSCPOG00000015460) #26	ENSCPOG00000005581 #27	SLC7A1 (ENSCPOG00000005590) #28	UBL3 (ENSCPOG00000036242) #29	KATNAL1 (ENSCPOG00000000804) #30	HMGB1 (ENSCPOG00000031835) ##33	USPL1 (ENSCPOG00000009937) #34	ALOX5AP (ENSCPOG00000032690) #35	MEDAG (ENSCPOG00000003921) #36	ENSCPOG00000007441	ENSCPOG00000035490	B3GLCT (ENSCPOG00000007455)	RXFP2 (ENSCPOG00000009157)
Naked mole-rat female	MODERN SPECIES	2	WASF3 (ENSHGLG00000006350)	GPR12 (ENSHGLG00000042343)	ENSHGLG00000006711	ENSHGLG00000005660 ##8	RASL11A (ENSHGLG00000005304) #9	ENSHGLG00000004173 #10	MTIF3 (ENSHGLG00000003959) #11	LNX2 (ENSHGLG00000003410) #13	POLR1D (ENSHGLG00000039229)	ENSHGLG00000003202 #14	GSX1 (ENSHGLG00000039858) #15	PDX1 (ENSHGLG00000010243) #16	CDX2 (ENSHGLG00000009166) #17	URAD (ENSHGLG00000008479) #18	FLT3 (ENSHGLG00000005717) #19	PAN3 (ENSHGLG00000018782) #22	FLT1 (ENSHGLG00000003643) #23	ENSHGLG00000008991 #25	SLC46A3 (ENSHGLG00000007999) #26	ENSHGLG00000039882 ##25	ENSHGLG00000012383	ENSHGLG00000013589 #27	ENSHGLG00000019220 #28	ENSHGLG00000033244	UBL3 (ENSHGLG00000040587) #29	KATNAL1 (ENSHGLG00000003538) #30	ENSHGLG00000003352 ##33	USPL1 (ENSHGLG00000036213) #34	ALOX5AP (ENSHGLG00000013689) #35	MEDAG (ENSHGLG00000037818) #36	TEX26 (ENSHGLG00000018916) #37
Sciuridae	ANCESTRAL SPECIES	34	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a ##8	ENSGT00940000153284.a.g.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Marmotini	ANCESTRAL SPECIES	29	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a ##8	ENSGT00940000153284.a.g.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00950000183120.e.b.a.a.b.b.b.b ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Marmotini_b	ANCESTRAL SPECIES	39	ENSGT01050000244955.a.a	ENSGT00940000158453.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Squirrel	MODERN SPECIES	72	SLITRK5 (ENSSTOG00000022257)	GPR12 (ENSSTOG00000011362)	ENSSTOG00000023839	USP12 (ENSSTOG00000011364)	ENSSTOG00000033637 ##8	RASL11A (ENSSTOG00000023879) #9	GTF3A (ENSSTOG00000013853) #10	MTIF3 (ENSSTOG00000013866) #11	LNX2 (ENSSTOG00000013869) #13	POLR1D (ENSSTOG00000013877)	GSX1 (ENSSTOG00000029234) #15	PDX1 (ENSSTOG00000028173) #16	ENSSTOG00000002918 #17	ENSSTOG00000028014	FLT3 (ENSSTOG00000002925) #19	PAN3 (ENSSTOG00000009453) #22	FLT1 (ENSSTOG00000021178) #23	POMP (ENSSTOG00000013687) #25	SLC46A3 (ENSSTOG00000013694) #26	ENSSTOG00000022794 #27	SLC7A1 (ENSSTOG00000012771) #28	UBL3 (ENSSTOG00000012777) #29	KATNAL1 (ENSSTOG00000008802) #30	ENSSTOG00000000443 ##33	USPL1 (ENSSTOG00000028023) #34	ALOX5AP (ENSSTOG00000010915) #35	MEDAG (ENSSTOG00000003534) #36	ENSSTOG00000020892	HSPH1 (ENSSTOG00000001700)	B3GLCT (ENSSTOG00000001710)	RXFP2 (ENSSTOG00000010636)
Arctic ground squirrel	MODERN SPECIES	58		SLITRK5 (ENSUPAG00010018031)	GPR12 (ENSUPAG00010018043)	USP12 (ENSUPAG00010018049)	ENSUPAG00010018061 ##8	RASL11A (ENSUPAG00010018073) #9	GTF3A (ENSUPAG00010018082) #10	MTIF3 (ENSUPAG00010018090) #11	LNX2 (ENSUPAG00010018096) #13	POLR1D (ENSUPAG00010018107)	GSX1 (ENSUPAG00010018112) #15	PDX1 (ENSUPAG00010018122) #16	CDX2 (ENSUPAG00010018125) #17	ENSUPAG00010018133	FLT3 (ENSUPAG00010018139) #19	PAN3 (ENSUPAG00010000039) #22	FLT1 (ENSUPAG00010000212) #23	POMP (ENSUPAG00010000279) #25	SLC46A3 (ENSUPAG00010000307) #26	ENSUPAG00010000323	ENSUPAG00010000338 #27	SLC7A1 (ENSUPAG00010000429) #28	UBL3 (ENSUPAG00010000449) #29	KATNAL1 (ENSUPAG00010000483) #30	ENSUPAG00010000514 ##33	USPL1 (ENSUPAG00010000537) #34	ALOX5AP (ENSUPAG00010000582) #35	MEDAG (ENSUPAG00010000596) #36	TEX26 (ENSUPAG00010000608) #37	ENSUPAG00010000650	HSPH1 (ENSUPAG00010000704)
Alpin marmot	MODERN SPECIES	13	ENSMMMG00000021355	SLITRK5 (ENSMMMG00000021362)	GPR12 (ENSMMMG00000021388)	ENSMMMG00000021396	ENSMMMG00000021402	RPL21 (ENSMMMG00000021415) ##8	RASL11A (ENSMMMG00000021424) #9	GTF3A (ENSMMMG00000021436) #10	MTIF3 (ENSMMMG00000021440) #11	LNX2 (ENSMMMG00000021459) #13	POLR1D (ENSMMMG00000021469)	GSX1 (ENSMMMG00000021480) #15	CDX2 (ENSMMMG00000021482) #17	ENSMMMG00000021485	FLT3 (ENSMMMG00000021498) #19	PAN3 (ENSMMMG00000021592) #22	FLT1 (ENSMMMG00000021722) #23	POMP (ENSMMMG00000021745) #25	SLC46A3 (ENSMMMG00000021759) #26	ENSMMMG00000021777 #27	SLC7A1 (ENSMMMG00000021811) #28	UBL3 (ENSMMMG00000021836) #29	KATNAL1 (ENSMMMG00000021861) #30	ENSMMMG00000021875 ##33	ENSMMMG00000021912 #34	ALOX5AP (ENSMMMG00000021924) #35	MEDAG (ENSMMMG00000021928) #36	TEX26 (ENSMMMG00000021931) #37	ENSMMMG00000021936	HSPH1 (ENSMMMG00000021945)	B3GLCT (ENSMMMG00000022023)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005000440	ENSSVLG00005000420	GPR12 (ENSSVLG00005000385)	ENSSVLG00005000350	ENSSVLG00005000213 ##8	RASL11A (ENSSVLG00005023466) #9	GTF3A (ENSSVLG00005023413) #10	MTIF3 (ENSSVLG00005023396) #11	LNX2 (ENSSVLG00005023366) #13	POLR1D (ENSSVLG00005023318)	GSX1 (ENSSVLG00005023295) #15	PDX1 (ENSSVLG00005023276) #16	CDX2 (ENSSVLG00005023249) #17	URAD (ENSSVLG00005023233) #18	FLT3 (ENSSVLG00005023095) #19	PAN3 (ENSSVLG00005022998) #22	FLT1 (ENSSVLG00005022893) #23	POMP (ENSSVLG00005022839) #25	SLC46A3 (ENSSVLG00005022784) #26	MTUS2 (ENSSVLG00005022484) #27	SLC7A1 (ENSSVLG00005022416) #28	UBL3 (ENSSVLG00005022374) #29	KATNAL1 (ENSSVLG00005022343) #30	ENSSVLG00005022302 ##33	USPL1 (ENSSVLG00005022232) #34	ALOX5AP (ENSSVLG00005022177) #35	MEDAG (ENSSVLG00005022152) #36	TEX26 (ENSSVLG00005022083) #37	ENSSVLG00005021904	HSPH1 (ENSSVLG00005021367)	B3GLCT (ENSSVLG00005021156)
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Myomorpha	ANCESTRAL SPECIES	46	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Muroidea	ANCESTRAL SPECIES	68	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Chinese hamster chok1gshd	MODERN SPECIES	130	Gpr12 (ENSCGRG00001003285)	ENSCGRG00001021742	Rpl21 (ENSCGRG00001007602) ##8	Rasl11a (ENSCGRG00001014752) #9	Gtf3a (ENSCGRG00001024969) #10	Mtif3 (ENSCGRG00001024612) #11	ENSCGRG00001024532	Lnx2 (ENSCGRG00001022751) #13	Polr1d (ENSCGRG00001021251)	Gsx1 (ENSCGRG00001017641) #15	Pdx1 (ENSCGRG00001024891) #16	Cdx2 (ENSCGRG00001024259) #17	Urad (ENSCGRG00001021146)	Flt3 (ENSCGRG00001010328) #19	ENSCGRG00001012489	Pan3 (ENSCGRG00001024986) #22	Flt1 (ENSCGRG00001000764) #23	Pomp (ENSCGRG00001000803) #25	Slc46a3 (ENSCGRG00001023870) #26	ENSCGRG00001001206	Mtus2 (ENSCGRG00001023648) #27	Slc7a1 (ENSCGRG00001019393) #28	Ubl3 (ENSCGRG00001002093) #29	Katnal1 (ENSCGRG00001024027) #30	ENSCGRG00001018342 #34	Alox5ap (ENSCGRG00001018470) #35	ENSCGRG00001025063	Medag (ENSCGRG00001024417) #36	Tex26 (ENSCGRG00001015836) #37	Wdr95 (ENSCGRG00001015579)	Hsph1 (ENSCGRG00001021270)
Golden Hamster	MODERN SPECIES	762	Rfc3 (ENSMAUG00000016464)	Gpr12 (ENSMAUG00000015064)	ENSMAUG00000010877	Usp12 (ENSMAUG00000010310)	ENSMAUG00000006957 ##8	Rasl11a (ENSMAUG00000019356) #9	Gtf3a (ENSMAUG00000016253) #10	Mtif3 (ENSMAUG00000011167) #11	Lnx2 (ENSMAUG00000009457) #13	Polr1d (ENSMAUG00000001946)	Pdx1 (ENSMAUG00000021082) #16	Cdx2 (ENSMAUG00000020822) #17	Urad (ENSMAUG00000019946)	ENSMAUG00000001106	Flt3 (ENSMAUG00000011952) #19	Pan3 (ENSMAUG00000021155) #22	Flt1 (ENSMAUG00000006859) #23	Pomp (ENSMAUG00000006509) #25	ENSMAUG00000020285	ENSMAUG00000018323 #27	Slc7a1 (ENSMAUG00000000359) #28	Ubl3 (ENSMAUG00000016399) #29	Katnal1 (ENSMAUG00000007731) #30	ENSMAUG00000017646	ENSMAUG00000013736 #34	Alox5ap (ENSMAUG00000012262) #35	Medag (ENSMAUG00000009604) #36	Tex26 (ENSMAUG00000016345) #37	Wdr95 (ENSMAUG00000014604)	Hsph1 (ENSMAUG00000002443)	B3glct (ENSMAUG00000018787)
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.d ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Prairie vole	MODERN SPECIES	7	ENSMOCG00000017944	Gpr12 (ENSMOCG00000009890)	Usp12 (ENSMOCG00000001714)	Rpl21 (ENSMOCG00000003487) ##8	Rasl11a (ENSMOCG00000000626) #9	ENSMOCG00000017124	Gtf3a (ENSMOCG00000004408) #10	Mtif3 (ENSMOCG00000017226) #11	Lnx2 (ENSMOCG00000022088) #13	Polr1d (ENSMOCG00000021288)	Gsx1 (ENSMOCG00000002374) #15	Pdx1 (ENSMOCG00000007886) #16	Cdx2 (ENSMOCG00000010222) #17	Urad (ENSMOCG00000018154)	Flt3 (ENSMOCG00000015945) #19	Pan3 (ENSMOCG00000001443) #22	Flt1 (ENSMOCG00000019790) #23	ENSMOCG00000000648	Pomp (ENSMOCG00000006131) #25	Slc46a3 (ENSMOCG00000007090) #26	Mtus2 (ENSMOCG00000013900) #27	Slc7a1 (ENSMOCG00000022298) #28	Ubl3 (ENSMOCG00000012896) #29	Katnal1 (ENSMOCG00000013914) #30	ENSMOCG00000018161 ##33	ENSMOCG00000018612 #34	Alox5ap (ENSMOCG00000018258) #35	Medag (ENSMOCG00000012447) #36	Tex26 (ENSMOCG00000013830) #37	Wdr95 (ENSMOCG00000021942)	Hsph1 (ENSMOCG00000019013)
Northern American deer mouse	MODERN SPECIES	15	Wasf3 (ENSPEMG00000011510)	ENSPEMG00000030961	Gpr12 (ENSPEMG00000010665)	Usp12 (ENSPEMG00000008193)	Rpl21 (ENSPEMG00000006041) ##8	Rasl11a (ENSPEMG00000004475) #9	Gtf3a (ENSPEMG00000003201) #10	Mtif3 (ENSPEMG00000000930) #11	Lnx2 (ENSPEMG00000008280) #13	Polr1d (ENSPEMG00000006336)	Gsx1 (ENSPEMG00000004992) #15	Pdx1 (ENSPEMG00000001176) #16	Cdx2 (ENSPEMG00000000632) #17	Urad (ENSPEMG00000025423)	Flt3 (ENSPEMG00000012278) #19	Pan3 (ENSPEMG00000008992) #22	Flt1 (ENSPEMG00000019000) #23	ENSPEMG00000014341 #25	Slc46a3 (ENSPEMG00000014019) #26	ENSPEMG00000024696	Mtus2 (ENSPEMG00000011863) #27	Slc7a1 (ENSPEMG00000006808) #28	Ubl3 (ENSPEMG00000010779) #29	Katnal1 (ENSPEMG00000009164) #30	ENSPEMG00000000834 ##33	Uspl1 (ENSPEMG00000003660) #34	Alox5ap (ENSPEMG00000000576) #35	Medag (ENSPEMG00000000331) #36	Tex26 (ENSPEMG00000019024) #37	Wdr95 (ENSPEMG00000016428)	Hsph1 (ENSPEMG00000009941)
Murinae	ANCESTRAL SPECIES	28	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00960000191336	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Mus	ANCESTRAL SPECIES	17	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00960000191336	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00960000191336	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00960000191336	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.b.c.c.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a.n ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00960000191336	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
spretus	MODERN SPECIES	14	Cdk8 (MGP_SPRETEiJ_G0029023)	Wasf3 (MGP_SPRETEiJ_G0029024)	Gpr12 (MGP_SPRETEiJ_G0029025)	Usp12 (MGP_SPRETEiJ_G0029026)	MGP_SPRETEiJ_G0029027 ##8	Rasl11a (MGP_SPRETEiJ_G0029028) #9	Gtf3a (MGP_SPRETEiJ_G0029029) #10	Mtif3 (MGP_SPRETEiJ_G0029030) #11	Lnx2 (MGP_SPRETEiJ_G0029031) #13	Polr1d (MGP_SPRETEiJ_G0029032)	Gsx1 (MGP_SPRETEiJ_G0029033) #15	Pdx1 (MGP_SPRETEiJ_G0029034) #16	Cdx2 (MGP_SPRETEiJ_G0029035) #17	Urad (MGP_SPRETEiJ_G0029036)	Flt3 (MGP_SPRETEiJ_G0029037) #19	Pan3 (MGP_SPRETEiJ_G0029038) #22	Flt1 (MGP_SPRETEiJ_G0029039) #23	Pomp (MGP_SPRETEiJ_G0029040) #25	Slc46a3 (MGP_SPRETEiJ_G0029041) #26	Mtus2 (MGP_SPRETEiJ_G0029042) #27	Slc7a1 (MGP_SPRETEiJ_G0029043) #28	Ubl3 (MGP_SPRETEiJ_G0029044) #29	MGP_SPRETEiJ_G0029045 #30	MGP_SPRETEiJ_G0029046 #30	MGP_SPRETEiJ_G0029047 ##33	Uspl1 (MGP_SPRETEiJ_G0029048) #34	Alox5ap (MGP_SPRETEiJ_G0029049) #35	Medag (MGP_SPRETEiJ_G0029050) #36	Tex26 (MGP_SPRETEiJ_G0029051) #37	Wdr95 (MGP_SPRETEiJ_G0029052)	Hsph1 (MGP_SPRETEiJ_G0029053)
Steppe mouse	MODERN SPECIES	3364	Gpr12 (ENSMSIG00000024129)	ENSMSIG00000024119	Usp12 (ENSMSIG00000024096)	ENSMSIG00000024049 ##8	Rasl11a (ENSMSIG00000024039) #9	Gtf3a (ENSMSIG00000024026) #10	Mtif3 (ENSMSIG00000024005) #11	Lnx2 (ENSMSIG00000023999) #13	ENSMSIG00000023978	Gsx1 (ENSMSIG00000023969) #15	Pdx1 (ENSMSIG00000023956) #16	Cdx2 (ENSMSIG00000023947) #17	ENSMSIG00000023941 #18	ENSMSIG00000023930	Flt3 (ENSMSIG00000023851) #19	Pan3 (ENSMSIG00000023687) #22	Flt1 (ENSMSIG00000023642) #23	ENSMSIG00000023628	Pomp (ENSMSIG00000023598) #25	Slc46a3 (ENSMSIG00000023578) #26	Mtus2 (ENSMSIG00000023484) #27	Slc7a1 (ENSMSIG00000023421) #28	Ubl3 (ENSMSIG00000023402) #29	Katnal1 (ENSMSIG00000023377) #30	ENSMSIG00000023332 ##33	Uspl1 (ENSMSIG00000023285) #34	Alox5ap (ENSMSIG00000023243) #35	ENSMSIG00000023226	Medag (ENSMSIG00000023188) #36	Tex26 (ENSMSIG00000023128) #37	Wdr95 (ENSMSIG00000023065)
Mouse	MODERN SPECIES	14	Gm3409 (ENSMUSG00000096664)	Gm3415 (ENSMUSG00000095557)	Gpr12 (ENSMUSG00000041468)	Usp12 (ENSMUSG00000029640)	Rpl21 (ENSMUSG00000041453) ##8	Rasl11a (ENSMUSG00000029641) #9	Gtf3a (ENSMUSG00000016503) #10	Mtif3 (ENSMUSG00000016510) #11	Lnx2 (ENSMUSG00000016520) #13	Polr1d (ENSMUSG00000029642)	Gsx1 (ENSMUSG00000053129) #15	Pdx1 (ENSMUSG00000029644) #16	Cdx2 (ENSMUSG00000029646) #17	Urad (ENSMUSG00000075543)	Flt3 (ENSMUSG00000042817) #19	Pan3 (ENSMUSG00000029647) #22	Flt1 (ENSMUSG00000029648) #23	Pomp (ENSMUSG00000029649) #25	Slc46a3 (ENSMUSG00000029650) #26	Mtus2 (ENSMUSG00000029651) #27	Slc7a1 (ENSMUSG00000041313) #28	Ubl3 (ENSMUSG00000001687) #29	Katnal1 (ENSMUSG00000041298) #30	Hmgb1 (ENSMUSG00000066551) ##33	Uspl1 (ENSMUSG00000041264) #34	Alox5ap (ENSMUSG00000060063) #35	Medag (ENSMUSG00000029659) #36	Tex26 (ENSMUSG00000029660) #37	Wdr95 (ENSMUSG00000029658)	Hsph1 (ENSMUSG00000029657)	B3glct (ENSMUSG00000051950)
Ryukyu mouse	MODERN SPECIES	14	Cdk8 (MGP_CAROLIEiJ_G0028025)	Wasf3 (MGP_CAROLIEiJ_G0028026)	Gpr12 (MGP_CAROLIEiJ_G0028027)	Usp12 (MGP_CAROLIEiJ_G0028028)	Rpl21 (MGP_CAROLIEiJ_G0028029) ##8	Rasl11a (MGP_CAROLIEiJ_G0028030) #9	Gtf3a (MGP_CAROLIEiJ_G0028031) #10	Mtif3 (MGP_CAROLIEiJ_G0028032) #11	Lnx2 (MGP_CAROLIEiJ_G0028033) #13	Polr1d (MGP_CAROLIEiJ_G0028034)	Gsx1 (MGP_CAROLIEiJ_G0028035) #15	Pdx1 (MGP_CAROLIEiJ_G0028036) #16	Cdx2 (MGP_CAROLIEiJ_G0028037) #17	Urad (MGP_CAROLIEiJ_G0028038)	Flt3 (MGP_CAROLIEiJ_G0028039) #19	Pan3 (MGP_CAROLIEiJ_G0028040) #22	Flt1 (MGP_CAROLIEiJ_G0028041) #23	Pomp (MGP_CAROLIEiJ_G0028042) #25	Slc46a3 (MGP_CAROLIEiJ_G0028043) #26	Mtus2 (MGP_CAROLIEiJ_G0028044) #27	Slc7a1 (MGP_CAROLIEiJ_G0028045) #28	Ubl3 (MGP_CAROLIEiJ_G0028046) #29	MGP_CAROLIEiJ_G0028047 #30	MGP_CAROLIEiJ_G0028048 #30	MGP_CAROLIEiJ_G0028049 ##33	Uspl1 (MGP_CAROLIEiJ_G0028050) #34	MGP_CAROLIEiJ_G0028051 #35	Medag (MGP_CAROLIEiJ_G0028052) #36	Tex26 (MGP_CAROLIEiJ_G0028053) #37	Wdr95 (MGP_CAROLIEiJ_G0028054)	Hsph1 (MGP_CAROLIEiJ_G0028055)
Shrew mouse	MODERN SPECIES	15	Cdk8 (MGP_PahariEiJ_G0024591)	Wasf3 (MGP_PahariEiJ_G0024592)	Gpr12 (MGP_PahariEiJ_G0024593)	Usp12 (MGP_PahariEiJ_G0024594)	MGP_PahariEiJ_G0024595 ##8	Rasl11a (MGP_PahariEiJ_G0024596) #9	Gtf3a (MGP_PahariEiJ_G0024597) #10	Mtif3 (MGP_PahariEiJ_G0024598) #11	Lnx2 (MGP_PahariEiJ_G0024599) #13	Polr1d (MGP_PahariEiJ_G0024600)	Gsx1 (MGP_PahariEiJ_G0024601) #15	Pdx1 (MGP_PahariEiJ_G0024602) #16	Cdx2 (MGP_PahariEiJ_G0024603) #17	Urad (MGP_PahariEiJ_G0024604)	Flt3 (MGP_PahariEiJ_G0024605) #19	Pan3 (MGP_PahariEiJ_G0024606) #22	Flt1 (MGP_PahariEiJ_G0024607) #23	MGP_PahariEiJ_G0024608	Slc46a3 (MGP_PahariEiJ_G0024609) #26	Mtus2 (MGP_PahariEiJ_G0024610) #27	Slc7a1 (MGP_PahariEiJ_G0024611) #28	Ubl3 (MGP_PahariEiJ_G0024612) #29	MGP_PahariEiJ_G0024613 #30	MGP_PahariEiJ_G0024614 #30	MGP_PahariEiJ_G0024615 ##33	Uspl1 (MGP_PahariEiJ_G0024616) #34	Alox5ap (MGP_PahariEiJ_G0024617) #35	Medag (MGP_PahariEiJ_G0024618) #36	Tex26 (MGP_PahariEiJ_G0024619) #37	MGP_PahariEiJ_G0024620	Hsph1 (MGP_PahariEiJ_G0024621)
Rat	MODERN SPECIES	3	LOC120095889 (ENSRNOG00000050264)	Wasf3 (ENSRNOG00000048898)	Gpr12 (ENSRNOG00000039832)	Usp12 (ENSRNOG00000033411)	Rpl21 (ENSRNOG00000000957) ##8	Rasl11a (ENSRNOG00000000956) #9	Gtf3a (ENSRNOG00000050016) #10	Mtif3 (ENSRNOG00000070811) #11	Lnx2 (ENSRNOG00000000955) #13	Polr1d (ENSRNOG00000000954)	Gsx1 (ENSRNOG00000000952) #15	Pdx1 (ENSRNOG00000046458) #16	Cdx2 (ENSRNOG00000032759) #17	Urad (ENSRNOG00000050360)	Flt3 (ENSRNOG00000054764) #19	Pan3 (ENSRNOG00000000942) #22	Flt1 (ENSRNOG00000000940) #23	Pomp (ENSRNOG00000049229) ##25	Slc46a3 (ENSRNOG00000000937) #26	Mtus2 (ENSRNOG00000032410) #27	Slc7a1 (ENSRNOG00000000924) #28	Katnal1 (ENSRNOG00000047618) #30	Rpl35a-ps6 (ENSRNOG00000069961)	AABR07035218.1 (ENSRNOG00000029813) ##33	Uspl1 (ENSRNOG00000000909) #34	Alox5ap (ENSRNOG00000000907) #35	AABR07035203.1 (ENSRNOG00000060198)	Medag (ENSRNOG00000000906) #36	Tex26 (ENSRNOG00000000905) #37	Wdr95 (ENSRNOG00000000904)	Hsph1 (ENSRNOG00000000902)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Usp12 (ENSNGAG00000023867)	ENSNGAG00000012493	ENSNGAG00000022375 #8	Rasl11a (ENSNGAG00000021721) #9	Gtf3a (ENSNGAG00000023691) #10	Mtif3 (ENSNGAG00000022911) #11	Lnx2 (ENSNGAG00000010972) #13	Polr1d (ENSNGAG00000006014)	ENSNGAG00000019459	ENSNGAG00000020643	Gsx1 (ENSNGAG00000013964) #15	ENSNGAG00000011527	Pdx1 (ENSNGAG00000024275) #16	Cdx2 (ENSNGAG00000019299) #17	Flt3 (ENSNGAG00000022203) #19	Pan3 (ENSNGAG00000005671) #22	Flt1 (ENSNGAG00000022615) #23	ENSNGAG00000019389 #25	Slc46a3 (ENSNGAG00000023221) #26	ENSNGAG00000022087	ENSNGAG00000011243 ##27	ENSNGAG00000023043 #27	Slc7a1 (ENSNGAG00000011095) #28	Ubl3 (ENSNGAG00000021531) #29	Katnal1 (ENSNGAG00000018344) #30	ENSNGAG00000020735 ##33	Uspl1 (ENSNGAG00000021450) #34	Alox5ap (ENSNGAG00000010455) #35	Medag (ENSNGAG00000021713) #36	Tex26 (ENSNGAG00000016306) #37	ENSNGAG00000021744
Lesser Egyptian jerboa	MODERN SPECIES	73	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507)	Usp12 (ENSJJAG00000019341)	Rasl11a (ENSJJAG00000020910) #9	Gtf3a (ENSJJAG00000011501) #10	Mtif3 (ENSJJAG00000013006) #11	Lnx2 (ENSJJAG00000014998) #13	ENSJJAG00000022671	ENSJJAG00000009076	Gsx1 (ENSJJAG00000021574) #15	Pdx1 (ENSJJAG00000017468) #16	Cdx2 (ENSJJAG00000010229) #17	Urad (ENSJJAG00000022682)	Flt3 (ENSJJAG00000004796) #19	Pan3 (ENSJJAG00000013560) #22	Flt1 (ENSJJAG00000009276) #23	Pomp (ENSJJAG00000014017) #25	Slc46a3 (ENSJJAG00000015117) #26	ENSJJAG00000008307 #27	Slc7a1 (ENSJJAG00000022034) #28	Ubl3 (ENSJJAG00000016514) #29	Katnal1 (ENSJJAG00000011429) #30	ENSJJAG00000000696 ##33	ENSJJAG00000014544 #34	Alox5ap (ENSJJAG00000004614) #35	Medag (ENSJJAG00000017396) #36	Tex26 (ENSJJAG00000007098) #37	Wdr95 (ENSJJAG00000015306)	Hsph1 (ENSJJAG00000000436)	B3glct (ENSJJAG00000022078)
Kangaroo rat	MODERN SPECIES	421	Wasf3 (ENSDORG00000003345)	Gpr12 (ENSDORG00000011141)	Usp12 (ENSDORG00000009137)	ENSDORG00000002224	ENSDORG00000002226 ##8	Rasl11a (ENSDORG00000026016) #9	Gtf3a (ENSDORG00000006079) #10	ENSDORG00000006081 #11	Lnx2 (ENSDORG00000013453) #13	Polr1d (ENSDORG00000029155)	Gsx1 (ENSDORG00000029182) #15	Pdx1 (ENSDORG00000008418) #16	Cdx2 (ENSDORG00000005495) #17	Urad (ENSDORG00000025006)	Flt3 (ENSDORG00000010727) #19	Pan3 (ENSDORG00000014727) #22	Flt1 (ENSDORG00000014729) #23	Pomp (ENSDORG00000012432) #25	Slc46a3 (ENSDORG00000012433) #26	ENSDORG00000025782 #27	Slc7a1 (ENSDORG00000006086) #28	ENSDORG00000026706	Ubl3 (ENSDORG00000026903) #29	Katnal1 (ENSDORG00000012794) #30	ENSDORG00000027930 ##33	Uspl1 (ENSDORG00000007790) #34	Alox5ap (ENSDORG00000006041) #35	Medag (ENSDORG00000008557) #36	ENSDORG00000008558 #37	Wdr95 (ENSDORG00000026485)	ENSDORG00000014903
Lagomorpha	ANCESTRAL SPECIES	166				ENSGT00940000153284.a.h	ENSGT00950000182922.a.a.a.b.a.a.b.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28
Rabbit	MODERN SPECIES	468			USP12 (ENSOCUG00000007088)	ENSOCUG00000002506 #8	RASL11A (ENSOCUG00000008121) #9	ENSOCUG00000038419	GTF3A (ENSOCUG00000011713) #10	MTIF3 (ENSOCUG00000011721) #11	LNX2 (ENSOCUG00000015683) #13	ENSOCUG00000015706 #14	GSX1 (ENSOCUG00000023424) #15	PDX1 (ENSOCUG00000004891) #16	CDX2 (ENSOCUG00000004893) #17	URAD (ENSOCUG00000026219) #18	FLT3 (ENSOCUG00000004897) #19	PAN3 (ENSOCUG00000008509) #22	FLT1 (ENSOCUG00000008523) #23	POMP (ENSOCUG00000010137) #25	SLC46A3 (ENSOCUG00000010129) #26	ENSOCUG00000013473 #27	ENSOCUG00000030839 #27	SLC7A1 (ENSOCUG00000013493) #28
Pika	MODERN SPECIES	2256																PAN3 (ENSOPRG00000016465) #22	FLT1 (ENSOPRG00000016484) #23	POMP (ENSOPRG00000016517) #25	SLC46A3 (ENSOPRG00000016527) #26
Tree shrew	MODERN SPECIES	2583																PAN3 (ENSTBEG00000017359) #22	FLT1 (ENSTBEG00000009960) #23
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b ##8	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Eulipotyphla	ANCESTRAL SPECIES	1148																ENSGT00390000001504 #22	ENSGT00940000158713 #23
Common shrew	MODERN SPECIES	3681																PAN3 (ENSSARG00000012201) #22
Hedgehog	MODERN SPECIES	4760																PAN3 (ENSEEUG00000014833) #22	FLT1 (ENSEEUG00000014914) #23
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Suina	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00950000182922.a.a.a.b.a.a.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Chacoan peccary	MODERN SPECIES	216	GPR12 (ENSCWAG00000018600)	ENSCWAG00000018581	USP12 (ENSCWAG00000018548)	RPL21 (ENSCWAG00000018513) ##8	RASL11A (ENSCWAG00000018481) #9	ENSCWAG00000018472	GTF3A (ENSCWAG00000018454) #10	MTIF3 (ENSCWAG00000018433) #11	LNX2 (ENSCWAG00000018415) #13	POLR1D (ENSCWAG00000018355)	GSX1 (ENSCWAG00000018331) #15	PDX1 (ENSCWAG00000018319) #16	CDX2 (ENSCWAG00000018265) #17	URAD (ENSCWAG00000018244) #18	FLT3 (ENSCWAG00000018108) #19	PAN3 (ENSCWAG00000018033) #22	FLT1 (ENSCWAG00000017867) #23	ENSCWAG00000017809	POMP (ENSCWAG00000017771) #25	SLC46A3 (ENSCWAG00000017732) #26	MTUS2 (ENSCWAG00000017501) #27	SLC7A1 (ENSCWAG00000017449) #28	UBL3 (ENSCWAG00000017400) #29	KATNAL1 (ENSCWAG00000017366) #30	HMGB1 (ENSCWAG00000017323) ##33	USPL1 (ENSCWAG00000017300) #34	ALOX5AP (ENSCWAG00000017261) #35	MEDAG (ENSCWAG00000017233) #36	TEX26 (ENSCWAG00000017184) #37	ENSCWAG00000017090	HSPH1 (ENSCWAG00000016864)
Pig	MODERN SPECIES	2	WASF3 (ENSSSCG00000009300)	ENSSSCG00000042074	GPR12 (ENSSSCG00000009301)	USP12 (ENSSSCG00000009302)	ENSSSCG00000009303 #8	RASL11A (ENSSSCG00000039890) #9	GTF3A (ENSSSCG00000009305) #10	MTIF3 (ENSSSCG00000037313) #11	LNX2 (ENSSSCG00000009308) #13	POLR1D (ENSSSCG00000009310)	GSX1 (ENSSSCG00000009313) #15	PDX1 (ENSSSCG00000055811) #16	CDX2 (ENSSSCG00000009317) #17	ENSSSCG00000009316	FLT3 (ENSSSCG00000009314) #19	PAN3 (ENSSSCG00000009319) #22	FLT1 (ENSSSCG00000009320) #23	POMP (ENSSSCG00000037170) #25	SLC46A3 (ENSSSCG00000009322) #26	MTUS2 (ENSSSCG00000025996) #27	SLC7A1 (ENSSSCG00000029456) #28	ENSSSCG00000035992 #29	KATNAL1 (ENSSSCG00000009326) #30	ENSSSCG00000009327 #33	USPL1 (ENSSSCG00000028065) #34	ALOX5AP (ENSSSCG00000009330) #35	MEDAG (ENSSSCG00000009331) #36	TEX26 (ENSSSCG00000046261) #37	ENSSSCG00000009333	HSPH1 (ENSSSCG00000009334)	B3GLCT (ENSSSCG00000009335)
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Camelidae	ANCESTRAL SPECIES	14	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Alpaca	MODERN SPECIES	137															FLT3 (ENSVPAG00000006354) #19	PAN3 (ENSVPAG00000006357) #22	FLT1 (ENSVPAG00000006361) #23
Arabian camel	MODERN SPECIES	5	CDK8 (ENSCDRG00005021779)	WASF3 (ENSCDRG00005021785)	GPR12 (ENSCDRG00005021787)	USP12 (ENSCDRG00005021790)	ENSCDRG00005021795 ##8	RASL11A (ENSCDRG00005021802) #9	GTF3A (ENSCDRG00005021807) #10	MTIF3 (ENSCDRG00005003341) #11	LNX2 (ENSCDRG00005003360) #13	POLR1D (ENSCDRG00005003401)	GSX1 (ENSCDRG00005003464) #15	PDX1 (ENSCDRG00005003496) #16	ENSCDRG00005003530 #17	ENSCDRG00005003574	FLT3 (ENSCDRG00005003607) #19	PAN3 (ENSCDRG00005003669) #22	FLT1 (ENSCDRG00005003978) #23	POMP (ENSCDRG00005004772) #25	SLC46A3 (ENSCDRG00005004813) #26	ENSCDRG00005004864 #27	ENSCDRG00005004898 #27	SLC7A1 (ENSCDRG00005004941) #28	UBL3 (ENSCDRG00005005011) #29	KATNAL1 (ENSCDRG00005005025) #30	HMGB1 (ENSCDRG00005005045) ##33	USPL1 (ENSCDRG00005005085) #34	ALOX5AP (ENSCDRG00005005116) #35	MEDAG (ENSCDRG00005005141) #36	TEX26 (ENSCDRG00005005163) #37	HSPH1 (ENSCDRG00005005202)	B3GLCT (ENSCDRG00005005450)
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Cetacea	ANCESTRAL SPECIES	20	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00510000047760.j	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00510000047760.j	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00510000047760.j	ENSGT00950000183026.B.r #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00510000047760.j	ENSGT00950000183026.B.r #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b.i #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00510000047760.j	ENSGT00950000183026.B.r #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Narwhal	MODERN SPECIES	315	WASF3 (ENSMMNG00015021063)	GPR12 (ENSMMNG00015021041)	USP12 (ENSMMNG00015021025)	ENSMMNG00015020992 ##8	RASL11A (ENSMMNG00015020985) #9	ENSMMNG00015020968	GTF3A (ENSMMNG00015020949) #10	MTIF3 (ENSMMNG00015020934) #11	LNX2 (ENSMMNG00015020919) #13	ENSMMNG00015020896 #14	GSX1 (ENSMMNG00015020877) #15	PDX1 (ENSMMNG00015020863) #16	CDX2 (ENSMMNG00015020842) #17	URAD (ENSMMNG00015020821) #18	FLT3 (ENSMMNG00015020792) #19	PAN3 (ENSMMNG00015020615) #22	FLT1 (ENSMMNG00015020525) #23	ENSMMNG00015020477 #25	SLC46A3 (ENSMMNG00015020455) #26	MTUS2 (ENSMMNG00015020336) #27	SLC7A1 (ENSMMNG00015020307) #28	UBL3 (ENSMMNG00015020289) #29	KATNAL1 (ENSMMNG00015020263) #30	HMGB1 (ENSMMNG00015020245) ##33	USPL1 (ENSMMNG00015020212) #34	ALOX5AP (ENSMMNG00015020175) #35	MEDAG (ENSMMNG00015020156) #36	HSPH1 (ENSMMNG00015020078)	B3GLCT (ENSMMNG00015019951)	RXFP2 (ENSMMNG00015019687)	FRY (ENSMMNG00015019379)
Beluga whale	MODERN SPECIES	29	WASF3 (ENSDLEG00000014723)	GPR12 (ENSDLEG00000014734)	USP12 (ENSDLEG00000014742)	RPL21 (ENSDLEG00000014757) ##8	RASL11A (ENSDLEG00000014782) #9	GTF3A (ENSDLEG00000014795) #10	MTIF3 (ENSDLEG00000014809) #11	LNX2 (ENSDLEG00000014818) #13	POLR1D (ENSDLEG00000014833)	ENSDLEG00000014844 #14	GSX1 (ENSDLEG00000014854) #15	PDX1 (ENSDLEG00000014860) #16	CDX2 (ENSDLEG00000014871) #17	ENSDLEG00000014887	FLT3 (ENSDLEG00000014957) #19	PAN3 (ENSDLEG00000015462) #22	FLT1 (ENSDLEG00000015551) #23	ENSDLEG00000015594 #25	SLC46A3 (ENSDLEG00000015606) #26	ENSDLEG00000015614	MTUS2 (ENSDLEG00000015621) #27	SLC7A1 (ENSDLEG00000015661) #28	UBL3 (ENSDLEG00000015684) #29	KATNAL1 (ENSDLEG00000015700) #30	HMGB1 (ENSDLEG00000005222) ##33	USPL1 (ENSDLEG00000005228) #34	ALOX5AP (ENSDLEG00000005233) #35	MEDAG (ENSDLEG00000005244) #36	ENSDLEG00000005251	HSPH1 (ENSDLEG00000005268)	B3GLCT (ENSDLEG00000005311)
Vaquita	MODERN SPECIES	9	WASF3 (ENSPSNG00000009017)	ENSPSNG00000009063	GPR12 (ENSPSNG00000009076)	USP12 (ENSPSNG00000009102)	ENSPSNG00000009136 ##8	RASL11A (ENSPSNG00000009220) #9	GTF3A (ENSPSNG00000009270) #10	MTIF3 (ENSPSNG00000009318) #11	LNX2 (ENSPSNG00000009360) #13	ENSPSNG00000009434	GSX1 (ENSPSNG00000009508) #15	PDX1 (ENSPSNG00000009545) #16	CDX2 (ENSPSNG00000009587) #17	URAD (ENSPSNG00000009637) #18	FLT3 (ENSPSNG00000009789) #19	PAN3 (ENSPSNG00000010591) #22	FLT1 (ENSPSNG00000010996) #23	ENSPSNG00000011404	ENSPSNG00000011451 #25	SLC46A3 (ENSPSNG00000011519) #26	ENSPSNG00000011610	ENSPSNG00000011712 #27	SLC7A1 (ENSPSNG00000011868) #28	UBL3 (ENSPSNG00000011923) #29	KATNAL1 (ENSPSNG00000011976) #30	HMGB1 (ENSPSNG00000012042) ##33	USPL1 (ENSPSNG00000012125) #34	ALOX5AP (ENSPSNG00000012197) #35	ENSPSNG00000011745	MEDAG (ENSPSNG00000011804) #36	HSPH1 (ENSPSNG00000011882)
Dolphin	MODERN SPECIES	632													PDX1 (ENSTTRG00000002811) #16	URAD (ENSTTRG00000002812) #18	FLT3 (ENSTTRG00000002813) #19	PAN3 (ENSTTRG00000002814) #22
Sperm whale	MODERN SPECIES	4	WASF3 (ENSPCTG00005012829)	GPR12 (ENSPCTG00005012894)	ENSPCTG00005012908	USP12 (ENSPCTG00005012963)	RPL21 (ENSPCTG00005013013) ##8	RASL11A (ENSPCTG00005013101) #9	GTF3A (ENSPCTG00005013180) #10	MTIF3 (ENSPCTG00005013236) #11	LNX2 (ENSPCTG00005013292) #13	POLR1D (ENSPCTG00005013390)	GSX1 (ENSPCTG00005013569) #15	PDX1 (ENSPCTG00005013620) #16	CDX2 (ENSPCTG00005013676) #17	ENSPCTG00005013732	FLT3 (ENSPCTG00005013790) #19	PAN3 (ENSPCTG00005014160) #22	FLT1 (ENSPCTG00005014294) #23	POMP (ENSPCTG00005014527) #25	SLC46A3 (ENSPCTG00005014585) #26	ENSPCTG00005014618	MTUS2 (ENSPCTG00005014659) #27	SLC7A1 (ENSPCTG00005014850) #28	UBL3 (ENSPCTG00005014919) #29	KATNAL1 (ENSPCTG00005014985) #30	HMGB1 (ENSPCTG00005015034) ##33	USPL1 (ENSPCTG00005015111) #34	ALOX5AP (ENSPCTG00005015171) #35	MEDAG (ENSPCTG00005015216) #36	TEX26 (ENSPCTG00005015295) #37	HSPH1 (ENSPCTG00005015496)	B3GLCT (ENSPCTG00005016496)
Blue whale	MODERN SPECIES	9	WASF3 (ENSBMSG00010014112)	GPR12 (ENSBMSG00010014207)	USP12 (ENSBMSG00010014225)	ENSBMSG00010014255 ##8	RASL11A (ENSBMSG00010014298) #9	ENSBMSG00010014311	GTF3A (ENSBMSG00010014329) #10	MTIF3 (ENSBMSG00010014375) #11	LNX2 (ENSBMSG00010014414) #13	ENSBMSG00010014466	GSX1 (ENSBMSG00010014529) #15	PDX1 (ENSBMSG00010014538) #16	CDX2 (ENSBMSG00010014566) #17	URAD (ENSBMSG00010014592) #18	FLT3 (ENSBMSG00010014623) #19	PAN3 (ENSBMSG00010014764) #22	FLT1 (ENSBMSG00010014949) #23	ENSBMSG00010015155 #25	SLC46A3 (ENSBMSG00010015191) #26	ENSBMSG00010015221	ENSBMSG00010015247 #27	SLC7A1 (ENSBMSG00010015357) #28	UBL3 (ENSBMSG00010015451) #29	KATNAL1 (ENSBMSG00010015496) #30	HMGB1 (ENSBMSG00010015522) ##33	USPL1 (ENSBMSG00010015554) #34	ALOX5AP (ENSBMSG00010015580) #35	MEDAG (ENSBMSG00010015612) #36	TEX26 (ENSBMSG00010015652) #37	ENSBMSG00010015688	HSPH1 (ENSBMSG00010015771)
Pecora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Yarkand deer	MODERN SPECIES	23	GPR12 (ENSCHYG00000019276)	USP12 (ENSCHYG00000019156)	ENSCHYG00000019062 ##8	RASL11A (ENSCHYG00000019009) #9	ENSCHYG00000018814 #10	MTIF3 (ENSCHYG00000018756) #11	LNX2 (ENSCHYG00000018648) #13	ENSCHYG00000018627	ENSCHYG00000018475	GSX1 (ENSCHYG00000018439) #15	PDX1 (ENSCHYG00000018394) #16	CDX2 (ENSCHYG00000018350) #17	URAD (ENSCHYG00000018294) #18	FLT3 (ENSCHYG00000017983) #19	ENSCHYG00000017919	PAN3 (ENSCHYG00000017249) #22	FLT1 (ENSCHYG00000016765) #23	ENSCHYG00000016696	ENSCHYG00000016630 #25	SLC46A3 (ENSCHYG00000016561) #26	MTUS2 (ENSCHYG00000016049) #27	SLC7A1 (ENSCHYG00000015804) #28	UBL3 (ENSCHYG00000015723) #29	KATNAL1 (ENSCHYG00000015536) #30	ENSCHYG00000015436 ##33	USPL1 (ENSCHYG00000015344) #34	ALOX5AP (ENSCHYG00000015250) #35	ENSCHYG00000015226	MEDAG (ENSCHYG00000015182) #36	TEX26 (ENSCHYG00000015069) #37	ENSCHYG00000014786
Percora_a	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Siberian musk deer	MODERN SPECIES	18	WASF3 (ENSMMSG00000003196)	GPR12 (ENSMMSG00000003186)	USP12 (ENSMMSG00000003167)	ENSMMSG00000003141 ##8	RASL11A (ENSMMSG00000003132) #9	ENSMMSG00000003107 #10	MTIF3 (ENSMMSG00000003094) #11	LNX2 (ENSMMSG00000003075) #13	POLR1D (ENSMMSG00000003040)	GSX1 (ENSMMSG00000003020) #15	ENSMMSG00000003007	PDX1 (ENSMMSG00000002992) #16	CDX2 (ENSMMSG00000002973) #17	URAD (ENSMMSG00000002960) #18	FLT3 (ENSMMSG00000002901) #19	PAN3 (ENSMMSG00000002825) #22	FLT1 (ENSMMSG00000002716) #23	ENSMMSG00000002681 #25	SLC46A3 (ENSMMSG00000002652) #26	MTUS2 (ENSMMSG00000002573) #27	SLC7A1 (ENSMMSG00000002527) #28	UBL3 (ENSMMSG00000002504) #29	KATNAL1 (ENSMMSG00000002485) #30	ENSMMSG00000002453 ##33	USPL1 (ENSMMSG00000002424) #34	ALOX5AP (ENSMMSG00000002405) #35	MEDAG (ENSMMSG00000002386) #36	TEX26 (ENSMMSG00000002369) #37	HSPH1 (ENSMMSG00000002127)	B3GLCT (ENSMMSG00000002053)	RXFP2 (ENSMMSG00000001942)
Bovidae	ANCESTRAL SPECIES	25	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Bovinae	ANCESTRAL SPECIES	29	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Bos	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Bos_b	ANCESTRAL SPECIES	33	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.a ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT01100000263481.n.a.b.b.a.b.b.a.a.b.a.b	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Hybrid Bos Indicus	MODERN SPECIES	3	CDK8 (ENSBIXG00005009401)	WASF3 (ENSBIXG00005009436)	GPR12 (ENSBIXG00005005366)	USP12 (ENSBIXG00005000510)	ENSBIXG00005009506 ##8	RASL11A (ENSBIXG00005009524) #9	MTIF3 (ENSBIXG00005000533) #11	ENSBIXG00005009581 #10	LNX2 (ENSBIXG00005009616) #13	POLR1D (ENSBIXG00005009666)	GSX1 (ENSBIXG00005009693) #15	PDX1 (ENSBIXG00005005368) #16	CDX2 (ENSBIXG00005000565) #17	ENSBIXG00005000568	FLT3 (ENSBIXG00005005466) #19	PAN3 (ENSBIXG00005005472) #22	FLT1 (ENSBIXG00005010159) #23	POMP (ENSBIXG00005010225) #25	SLC46A3 (ENSBIXG00005000810) #26	MTUS2 (ENSBIXG00005010291) #27	SLC7A1 (ENSBIXG00005006772) #28	UBL3 (ENSBIXG00005010348) #29	ENSBIXG00005000793	KATNAL1 (ENSBIXG00005000876) #30	ENSBIXG00005006774	ENSBIXG00005010515 ##33	USPL1 (ENSBIXG00005010560) #34	ALOX5AP (ENSBIXG00005000697) #35	MEDAG (ENSBIXG00005010602) #36	TEX26 (ENSBIXG00005010612) #37	ENSBIXG00005000923
Cow	MODERN SPECIES	3	WASF3 (ENSBTAG00000014619)	GPR12 (ENSBTAG00000010769)	USP12 (ENSBTAG00000017179)	RPL21 (ENSBTAG00000001648) ##8	RASL11A (ENSBTAG00000005244) #9	GTF3A (ENSBTAG00000012600) #10	MTIF3 (ENSBTAG00000020530) #11	LNX2 (ENSBTAG00000015614) #13	POLR1D (ENSBTAG00000008642)	ENSBTAG00000048386 #14	GSX1 (ENSBTAG00000009166) #15	PDX1 (ENSBTAG00000010690) #16	CDX2 (ENSBTAG00000001819) #17	URAD (ENSBTAG00000013819)	FLT3 (ENSBTAG00000018572) #19	PAN3 (ENSBTAG00000009912) #22	FLT1 (ENSBTAG00000016915) #23	POMP (ENSBTAG00000014024) #25	MTUS2 (ENSBTAG00000001094) #27	SLC7A1 (ENSBTAG00000018577) #28	UBL3 (ENSBTAG00000012170) #29	ENSBTAG00000052411	KATNAL1 (ENSBTAG00000009340) #30	HMGB1 (ENSBTAG00000018103) ##33	USPL1 (ENSBTAG00000001178) #34	ALOX5AP (ENSBTAG00000013201) #35	MEDAG (ENSBTAG00000008271) #36	TEX26 (ENSBTAG00000033386) #37	ENSBTAG00000016052	HSPH1 (ENSBTAG00000005012)	B3GLCT (ENSBTAG00000033412)
Bos_a	ANCESTRAL SPECIES	19	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00940000154361.A #15	ENSGT00390000003643 #14	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Domestic yak	MODERN SPECIES	6	ENSBGRG00000004746	USP12 (ENSBGRG00000004775)	ENSBGRG00000004884 ##8	RASL11A (ENSBGRG00000004923) #9	GTF3A (ENSBGRG00000004973) #10	MTIF3 (ENSBGRG00000005098) #11	LNX2 (ENSBGRG00000005122) #13	ENSBGRG00000005177 #14	GSX1 (ENSBGRG00000005224) #15	ENSBGRG00000005241	ENSBGRG00000005252	PDX1 (ENSBGRG00000005259) #16	CDX2 (ENSBGRG00000005271) #17	ENSBGRG00000005297	FLT3 (ENSBGRG00000005369) #19	PAN3 (ENSBGRG00000005813) #22	ENSBGRG00000006167	ENSBGRG00000006327 #23	POMP (ENSBGRG00000006553) #25	SLC46A3 (ENSBGRG00000006624) #26	MTUS2 (ENSBGRG00000006670) #27	SLC7A1 (ENSBGRG00000006751) #28	UBL3 (ENSBGRG00000006856) #29	KATNAL1 (ENSBGRG00000006924) #30	ENSBGRG00000007092 ##33	ENSBGRG00000007221	USPL1 (ENSBGRG00000007239) #34	ALOX5AP (ENSBGRG00000007328) #35	MEDAG (ENSBGRG00000007441) #36	TEX26 (ENSBGRG00000007537) #37	ENSBGRG00000007607
Wild yak	MODERN SPECIES	1371															FLT3 (ENSBMUG00000023185) #19	PAN3 (ENSBMUG00000023150) #22	FLT1 (ENSBMUG00000023081) #23	POMP (ENSBMUG00000023007) #25	SLC46A3 (ENSBMUG00000023002) #26	MTUS2 (ENSBMUG00000022991) #27	SLC7A1 (ENSBMUG00000022964) #28	UBL3 (ENSBMUG00000022941) #29	KATNAL1 (ENSBMUG00000022930) #30	HMGB1 (ENSBMUG00000022917) ##33	USPL1 (ENSBMUG00000022880) #34	ALOX5AP (ENSBMUG00000022869) #35	MEDAG (ENSBMUG00000022857) #36	TEX26 (ENSBMUG00000022841) #37	ENSBMUG00000022823	HSPH1 (ENSBMUG00000022797)	ENSBMUG00000022779
American bison	MODERN SPECIES	3213	WASF3 (ENSBBBG00000002463)	GPR12 (ENSBBBG00000012732)	USP12 (ENSBBBG00000002455)	ENSBBBG00000012692 ##8	RASL11A (ENSBBBG00000007545) #9	GTF3A (ENSBBBG00000012669) #10	ENSBBBG00000012643 #11	LNX2 (ENSBBBG00000012639) #13	POLR1D (ENSBBBG00000012618)	ENSBBBG00000012613 #14	GSX1 (ENSBBBG00000001841) #15	PDX1 (ENSBBBG00000001839) #16	ENSBBBG00000012601 #17	URAD (ENSBBBG00000008107) #18	FLT3 (ENSBBBG00000012586) #19	PAN3 (ENSBBBG00000012554) #22	FLT1 (ENSBBBG00000012485) #23	POMP (ENSBBBG00000002357) #25	SLC46A3 (ENSBBBG00000012388) #26
Caprinae	ANCESTRAL SPECIES	28	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f.e.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424.g #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643.k #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635	ENSGT00940000155499
Goat	MODERN SPECIES	3	WASF3 (ENSCHIG00000017657)	GPR12 (ENSCHIG00000007944)	USP12 (ENSCHIG00000006817)	RPL21 (ENSCHIG00000021720) ##8	RASL11A (ENSCHIG00000016902) #9	ENSCHIG00000021040 #10	ENSCHIG00000026996 #11	LNX2 (ENSCHIG00000024542) #13	POLR1D (ENSCHIG00000021910)	ENSCHIG00000014902 #14	GSX1 (ENSCHIG00000026107) #15	PDX1 (ENSCHIG00000016212) #16	CDX2 (ENSCHIG00000024755) #17	ENSCHIG00000015696	FLT3 (ENSCHIG00000006089) #19	PAN3 (ENSCHIG00000010876) #22	FLT1 (ENSCHIG00000019587) #23	ENSCHIG00000007021 #25	SLC46A3 (ENSCHIG00000006252) #26	MTUS2 (ENSCHIG00000014951) #27	SLC7A1 (ENSCHIG00000017131) #28	UBL3 (ENSCHIG00000005881) #29	KATNAL1 (ENSCHIG00000011417) #30	HMGB1 (ENSCHIG00000018473) ##33	USPL1 (ENSCHIG00000025535) #34	ALOX5AP (ENSCHIG00000020532) #35	MEDAG (ENSCHIG00000019733) #36	TEX26 (ENSCHIG00000013376) #37	HSPH1 (ENSCHIG00000003518)	B3GLCT (ENSCHIG00000016248)	RXFP2 (ENSCHIG00000007689)
Rambouillet Sheep	MODERN SPECIES	1	GPR12 (ENSOARG00020012619)	USP12 (ENSOARG00020012488)	ENSOARG00020012435	ENSOARG00020012335 ##8	RASL11A (ENSOARG00020012287) #9	ENSOARG00020012160 #10	ENSOARG00020012106 #10	MTIF3 (ENSOARG00020012058) #11	LNX2 (ENSOARG00020012002) #13	POLR1D (ENSOARG00020011900)	GSX1 (ENSOARG00020011857) #15	PDX1 (ENSOARG00020011821) #16	CDX2 (ENSOARG00020011783) #17	URAD (ENSOARG00020011747) #18	FLT3 (ENSOARG00020011519) #19	PAN3 (ENSOARG00020010540) #22	FLT1 (ENSOARG00020010103) #23	ENSOARG00020010005 #25	SLC46A3 (ENSOARG00020009919) #26	ENSOARG00020009812 #27	SLC7A1 (ENSOARG00020009646) #28	UBL3 (ENSOARG00020009591) #29	KATNAL1 (ENSOARG00020009464) #30	HMGB1 (ENSOARG00020009396) ##33	ALOX5AP (ENSOARG00020009284) #35	MEDAG (ENSOARG00020009224) #36	TEX26 (ENSOARG00020009149) #37	ENSOARG00020008926	HSPH1 (ENSOARG00020008491)	B3GLCT (ENSOARG00020008264)	ENSOARG00020008205
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Equus	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Donkey	MODERN SPECIES	29	GPR12 (ENSEASG00005035884)	USP12 (ENSEASG00005022511)	ENSEASG00005022501 ##8	RASL11A (ENSEASG00005034471) #9	ENSEASG00005022495 #10	MTIF3 (ENSEASG00005022492) #11	LNX2 (ENSEASG00005022490) #13	POLR1D (ENSEASG00005022487)	ENSEASG00005035501 #14	GSX1 (ENSEASG00005022483) #15	PDX1 (ENSEASG00005022482) #16	CDX2 (ENSEASG00005022479) #17	ENSEASG00005028208	ENSEASG00005003450	FLT3 (ENSEASG00005022471) #19	PAN3 (ENSEASG00005022467) #22	ENSEASG00005029804	ENSEASG00005022461 #23	ENSEASG00005029421 #25	SLC46A3 (ENSEASG00005022457) #26	MTUS2 (ENSEASG00005022449) #27	SLC7A1 (ENSEASG00005022432) #28	UBL3 (ENSEASG00005022423) #29	KATNAL1 (ENSEASG00005022416) #30	HMGB1 (ENSEASG00005032345) ##33	USPL1 (ENSEASG00005022400) #34	ALOX5AP (ENSEASG00005022395) #35	MEDAG (ENSEASG00005022391) #36	TEX26 (ENSEASG00005022387) #37	ENSEASG00005022381	HSPH1 (ENSEASG00005022374)
Horse	MODERN SPECIES	8	WASF3 (ENSECAG00000000050)	GPR12 (ENSECAG00000059623)	ENSECAG00000036907	ENSECAG00000045376	USP12 (ENSECAG00000006779)	RASL11A (ENSECAG00000012858) #9	GTF3A (ENSECAG00000014803) #10	MTIF3 (ENSECAG00000016697) #11	LNX2 (ENSECAG00000017219) #13	ENSECAG00000021095 #14	GSX1 (ENSECAG00000035168) #15	PDX1 (ENSECAG00000000679) #16	CDX2 (ENSECAG00000027754) #17	ENSECAG00000002049	FLT3 (ENSECAG00000002171) #19	PAN3 (ENSECAG00000014810) #22	FLT1 (ENSECAG00000021700)	ENSECAG00000049171 #23	POMP (ENSECAG00000011951) #25	ENSECAG00000048907	SLC46A3 (ENSECAG00000011432) #26	MTUS2 (ENSECAG00000013935) #27	SLC7A1 (ENSECAG00000015413) #28	UBL3 (ENSECAG00000001318) #29	KATNAL1 (ENSECAG00000004830) #30	HMGB1 (ENSECAG00000008439) ##33	USPL1 (ENSECAG00000011889) #34	ALOX5AP (ENSECAG00000012371) #35	MEDAG (ENSECAG00000014702) #36	TEX26 (ENSECAG00000015300) #37	ENSECAG00000016853
Chiroptera	ANCESTRAL SPECIES	66	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Megabat	MODERN SPECIES	1410																PAN3 (ENSPVAG00000001113) #22	FLT1 (ENSPVAG00000001114) #23
Microchiroptera	ANCESTRAL SPECIES	46	ENSGT00940000157104.m.a	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b.f ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499	ENSGT00940000158948.b
Greater horseshoe bat	MODERN SPECIES	22	ENSRFEG00010003754	GPR12 (ENSRFEG00010003761)	USP12 (ENSRFEG00010003775)	ENSRFEG00010003789 ##8	RASL11A (ENSRFEG00010003821) #9	GTF3A (ENSRFEG00010003845) #10	MTIF3 (ENSRFEG00010003873) #11	LNX2 (ENSRFEG00010003884) #13	ENSRFEG00010003922	ENSRFEG00010003942	GSX1 (ENSRFEG00010003946) #15	PDX1 (ENSRFEG00010003956) #16	CDX2 (ENSRFEG00010003965) #17	ENSRFEG00010003975	FLT3 (ENSRFEG00010004003) #19	PAN3 (ENSRFEG00010004077) #22	FLT1 (ENSRFEG00010004193) #23	ENSRFEG00010004318 #25	SLC46A3 (ENSRFEG00010004332) #26	MTUS2 (ENSRFEG00010004361) #27	ENSRFEG00010004420 #33	SLC7A1 (ENSRFEG00010000293) #28	UBL3 (ENSRFEG00010000414) #29	KATNAL1 (ENSRFEG00010000476) #30	HMGB1 (ENSRFEG00010000531) ##33	USPL1 (ENSRFEG00010000567) #34	ALOX5AP (ENSRFEG00010000601) #35	MEDAG (ENSRFEG00010000622) #36	TEX26 (ENSRFEG00010000643) #37	HSPH1 (ENSRFEG00010000709)	B3GLCT (ENSRFEG00010000860)
Microbat	MODERN SPECIES	1164				GPR12 (ENSMLUG00000002365)	USP12 (ENSMLUG00000007510)	ENSMLUG00000010093 ##8	RASL11A (ENSMLUG00000016335) #9	GTF3A (ENSMLUG00000002158) #10	MTIF3 (ENSMLUG00000002161) #11	LNX2 (ENSMLUG00000010946) #13	ENSMLUG00000025151 #14	PDX1 (ENSMLUG00000010639) #16	CDX2 (ENSMLUG00000002563) #17	ENSMLUG00000002576	FLT3 (ENSMLUG00000002582) #19	PAN3 (ENSMLUG00000004348) #22	FLT1 (ENSMLUG00000004358) #23	ENSMLUG00000010322 #25	SLC46A3 (ENSMLUG00000006699) #26
Carnivora	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Felidae	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Panthera	ANCESTRAL SPECIES	21	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00950000182922.a.a.a.b.a.a.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00950000182922.a.a.a.b.a.a.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
leopard	MODERN SPECIES	14	CDK8 (ENSPPRG00000023432)	WASF3 (ENSPPRG00000022988)	GPR12 (ENSPPRG00000017596)	USP12 (ENSPPRG00000000510)	ENSPPRG00000001012 ##8	RASL11A (ENSPPRG00000001350) #9	GTF3A (ENSPPRG00000002368) #10	MTIF3 (ENSPPRG00000002497) #11	LNX2 (ENSPPRG00000002783) #13	POLR1D (ENSPPRG00000003381)	GSX1 (ENSPPRG00000004333) #15	PDX1 (ENSPPRG00000004534) #16	CDX2 (ENSPPRG00000004823) #17	ENSPPRG00000005097	FLT3 (ENSPPRG00000005326) #19	PAN3 (ENSPPRG00000008505) #22	ENSPPRG00000011363	ENSPPRG00000013104 #23	POMP (ENSPPRG00000013840) #25	SLC46A3 (ENSPPRG00000015693) #26	ENSPPRG00000016401 #27	SLC7A1 (ENSPPRG00000017628) #28	UBL3 (ENSPPRG00000019662) #29	KATNAL1 (ENSPPRG00000022045) #30	HMGB1 (ENSPPRG00000022869) ##33	USPL1 (ENSPPRG00000000053) #34	ALOX5AP (ENSPPRG00000000293) #35	MEDAG (ENSPPRG00000000734) #36	TEX26 (ENSPPRG00000001047) #37	ENSPPRG00000002151	HSPH1 (ENSPPRG00000005057)
lion	MODERN SPECIES	1	CDK8 (ENSPLOG00000004108)	WASF3 (ENSPLOG00000004088)	GPR12 (ENSPLOG00000004075)	USP12 (ENSPLOG00000004064)	ENSPLOG00000021394 #8	RASL11A (ENSPLOG00000021369) #9	GTF3A (ENSPLOG00000021339) #10	MTIF3 (ENSPLOG00000021318) #11	LNX2 (ENSPLOG00000021288) #13	ENSPLOG00000021249 #14	GSX1 (ENSPLOG00000021227) #15	PDX1 (ENSPLOG00000021216) #16	CDX2 (ENSPLOG00000021193) #17	URAD (ENSPLOG00000021175) #18	FLT3 (ENSPLOG00000021081) #19	PAN3 (ENSPLOG00000020895) #22	FLT1 (ENSPLOG00000020410) #23	POMP (ENSPLOG00000020240) #25	SLC46A3 (ENSPLOG00000020203) #26	ENSPLOG00000020066 #27	SLC7A1 (ENSPLOG00000020023) #28	UBL3 (ENSPLOG00000019992) #29	KATNAL1 (ENSPLOG00000019942) #30	ENSPLOG00000019888 ##33	USPL1 (ENSPLOG00000019841) #34	ALOX5AP (ENSPLOG00000019807) #35	MEDAG (ENSPLOG00000019748) #36	TEX26 (ENSPLOG00000019557) #37	ENSPLOG00000019458	HSPH1 (ENSPLOG00000019185)	B3GLCT (ENSPLOG00000019047)
Tiger	MODERN SPECIES	38	CDK8 (ENSPTIG00000021301)	WASF3 (ENSPTIG00000020649)	GPR12 (ENSPTIG00000005107)	USP12 (ENSPTIG00000020368)	ENSPTIG00000020228 ##8	RASL11A (ENSPTIG00000019926) #9	GTF3A (ENSPTIG00000018958) #10	MTIF3 (ENSPTIG00000018642) #11	LNX2 (ENSPTIG00000018500) #13	POLR1D (ENSPTIG00000018137)	ENSPTIG00000017320 #14	GSX1 (ENSPTIG00000016369) #15	ENSPTIG00000016324	ENSPTIG00000014998 #17	FLT3 (ENSPTIG00000013522) #19	PAN3 (ENSPTIG00000011675) #22	ENSPTIG00000010147	ENSPTIG00000007575 #23	POMP (ENSPTIG00000007181) #25	SLC46A3 (ENSPTIG00000005724) #26	ENSPTIG00000001385 #27	SLC7A1 (ENSPTIG00000021015) #28	UBL3 (ENSPTIG00000020762) #29	KATNAL1 (ENSPTIG00000020391) #30	ENSPTIG00000020002 ##33	USPL1 (ENSPTIG00000019771) #34	ALOX5AP (ENSPTIG00000019272) #35	MEDAG (ENSPTIG00000018319) #36	TEX26 (ENSPTIG00000017363) #37	ENSPTIG00000016067	HSPH1 (ENSPTIG00000013145)
Cat	MODERN SPECIES		CDK8 (ENSFCAG00000027073)	WASF3 (ENSFCAG00000009474)	GPR12 (ENSFCAG00000014524)	USP12 (ENSFCAG00000026620)	ENSFCAG00000006750 ##8	RASL11A (ENSFCAG00000006749) #9	GTF3A (ENSFCAG00000006982) #10	MTIF3 (ENSFCAG00000006985) #11	LNX2 (ENSFCAG00000011821) #13	ENSFCAG00000030162 #14	GSX1 (ENSFCAG00000026793) #15	PDX1 (ENSFCAG00000034557) #16	CDX2 (ENSFCAG00000026699) #17	ENSFCAG00000036126	FLT3 (ENSFCAG00000004539) #19	PAN3 (ENSFCAG00000018643) #22	FLT1 (ENSFCAG00000013299) #23	POMP (ENSFCAG00000008235) #25	SLC46A3 (ENSFCAG00000008236) #26	MTUS2 (ENSFCAG00000014322) #27	SLC7A1 (ENSFCAG00000014326) #28	UBL3 (ENSFCAG00000027217) #29	KATNAL1 (ENSFCAG00000032001) #30	HMGB1 (ENSFCAG00000000200) ##33	USPL1 (ENSFCAG00000022053) #34	ALOX5AP (ENSFCAG00000037195) #35	MEDAG (ENSFCAG00000007544) #36	TEX26 (ENSFCAG00000024146) #37	ENSFCAG00000031325	HSPH1 (ENSFCAG00000007547)	B3GLCT (ENSFCAG00000018185)
Caniformia	ANCESTRAL SPECIES	24	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Canidae	ANCESTRAL SPECIES	31	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000153229.A.b #18	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00390000011067.A.ib.b	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.a.b.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00940000153425.a.a.b.a	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967
Dog	MODERN SPECIES	17	GPR12 (ENSCAFG00845026068)	ENSCAFG00845026031	USP12 (ENSCAFG00845025960)	RPL21 (ENSCAFG00845025858) ##8	RASL11A (ENSCAFG00845025821) #9	GTF3A (ENSCAFG00845025723) #10	MTIF3 (ENSCAFG00845025671) #11	LNX2 (ENSCAFG00845025569) #13	POLR1D (ENSCAFG00845025499) #14	GSX1 (ENSCAFG00845025440) #15	PDX1 (ENSCAFG00845025401) #16	CDX2 (ENSCAFG00845025357) #17	ENSCAFG00845025288	ENSCAFG00845025235	FLT3 (ENSCAFG00845024412) #19	PAN3 (ENSCAFG00845023866) #22	FLT1 (ENSCAFG00845023188) #23	POMP (ENSCAFG00845022887) #25	SLC46A3 (ENSCAFG00845022832) #26	MTUS2 (ENSCAFG00845022435) #27	SLC7A1 (ENSCAFG00845022314) #28	ENSCAFG00845022280	UBL3 (ENSCAFG00845022214) #29	ENSCAFG00845022193	KATNAL1 (ENSCAFG00845022093) #30	HMGB1 (ENSCAFG00845021967) ##33	USPL1 (ENSCAFG00845021869) #34	ALOX5AP (ENSCAFG00845021804) #35	MEDAG (ENSCAFG00845021735) #36	TEX26 (ENSCAFG00845021671) #37	ENSCAFG00845021368
Dingo	MODERN SPECIES	304	USP12 (ENSCAFG00020025315)	ENSCAFG00020025313 ##8	RASL11A (ENSCAFG00020025312) #9	ENSCAFG00020025311	ENSCAFG00020025308 #10	ENSCAFG00020025306 #10	MTIF3 (ENSCAFG00020025304) #11	LNX2 (ENSCAFG00020025302) #13	ENSCAFG00020025301	GSX1 (ENSCAFG00020025299) #15	PDX1 (ENSCAFG00020025298) #16	CDX2 (ENSCAFG00020025296) #17	ENSCAFG00020025291	ENSCAFG00020025290	FLT3 (ENSCAFG00020025240) #19	PAN3 (ENSCAFG00020025181) #22	ENSCAFG00020025175	ENSCAFG00020025171 #23	ENSCAFG00020025170	ENSCAFG00020025169	SLC46A3 (ENSCAFG00020025168) #26	MTUS2 (ENSCAFG00020025161) #27	SLC7A1 (ENSCAFG00020025151) #28	ENSCAFG00020025149	UBL3 (ENSCAFG00020025147) #29	ENSCAFG00020025145	KATNAL1 (ENSCAFG00020025138) #30	ENSCAFG00020025137	ENSCAFG00020025133	ENSCAFG00020025123 ##33	USPL1 (ENSCAFG00020025117) #34
Red fox	MODERN SPECIES	22	GPR12 (ENSVVUG00000009138)	USP12 (ENSVVUG00000009179)	RPL21 (ENSVVUG00000009183) ##8	RASL11A (ENSVVUG00000009191) #9	GTF3A (ENSVVUG00000009197) #10	MTIF3 (ENSVVUG00000009207) #11	LNX2 (ENSVVUG00000009209) #13	POLR1D (ENSVVUG00000009216)	ENSVVUG00000009220 #14	GSX1 (ENSVVUG00000009230) #15	ENSVVUG00000009233	PDX1 (ENSVVUG00000009234) #16	CDX2 (ENSVVUG00000009237) #17	FLT3 (ENSVVUG00000009247) #19	ENSVVUG00000009307 #18	PAN3 (ENSVVUG00000009313) #22	FLT1 (ENSVVUG00000009356) #23	POMP (ENSVVUG00000009398) #25	SLC46A3 (ENSVVUG00000009403) #26	MTUS2 (ENSVVUG00000009413) #27	SLC7A1 (ENSVVUG00000009439) #28	ENSVVUG00000009450	UBL3 (ENSVVUG00000009455) #29	KATNAL1 (ENSVVUG00000009499) #30	HMGB1 (ENSVVUG00000009534) ##33	USPL1 (ENSVVUG00000009708) #34	ALOX5AP (ENSVVUG00000009718) #35	MEDAG (ENSVVUG00000009731) #36	TEX26 (ENSVVUG00000009744) #37	ENSVVUG00000009779	HSPH1 (ENSVVUG00000010061)
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.a.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967
Mustelinae	ANCESTRAL SPECIES	109										ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967	ENSGT00940000159635
American mink	MODERN SPECIES	346										ENSNVIG00000002786 #14	GSX1 (ENSNVIG00000002846) #15	PDX1 (ENSNVIG00000002855) #16	CDX2 (ENSNVIG00000002864) #17	URAD (ENSNVIG00000002869) #18	FLT3 (ENSNVIG00000002880) #19	PAN3 (ENSNVIG00000002913) #22	FLT1 (ENSNVIG00000002982) #23	ENSNVIG00000003156 #25	S46A3 (ENSNVIG00000003179) #26
Ferret	MODERN SPECIES	364										ENSMPUG00000005164 #14	GSX1 (ENSMPUG00000005153) #15	PDX1 (ENSMPUG00000005147) #16	CDX2 (ENSMPUG00000005092) #17	ENSMPUG00000005088	FLT3 (ENSMPUG00000005073) #19	PAN3 (ENSMPUG00000004987) #22	FLT1 (ENSMPUG00000004699) #23	POMP (ENSMPUG00000004690) #25	SLC46A3 (ENSMPUG00000004680) #26	ENSMPUG00000004676	MTUS2 (ENSMPUG00000004661) #27	SLC7A1 (ENSMPUG00000004649) #28	UBL3 (ENSMPUG00000004638) #29	ENSMPUG00000004620	KATNAL1 (ENSMPUG00000004610) #30	HMGB1 (ENSMPUG00000004579) ##33	USPL1 (ENSMPUG00000004564) #34	ALOX5AP (ENSMPUG00000004556) #35	MEDAG (ENSMPUG00000004549) #36	TEX26 (ENSMPUG00000004539) #37	ENSMPUG00000004527
Ursidae	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.a.b #8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Giant Panda	MODERN SPECIES	17	GPR12 (ENSAMEG00000019402)	ENSAMEG00000024690	USP12 (ENSAMEG00000001863)	RPL21 (ENSAMEG00000031074) #8	RASL11A (ENSAMEG00000015812) #9	ENSAMEG00000029656	GTF3A (ENSAMEG00000015824) #10	MTIF3 (ENSAMEG00000015841) #11	LNX2 (ENSAMEG00000015845) #13	ENSAMEG00000028974 #14	GSX1 (ENSAMEG00000030161) #15	PDX1 (ENSAMEG00000025378) #16	CDX2 (ENSAMEG00000029013) #17	ENSAMEG00000031229	FLT3 (ENSAMEG00000002354) #19	PAN3 (ENSAMEG00000002349) #22	FLT1 (ENSAMEG00000002209) #23	ENSAMEG00000008961 #25	SLC46A3 (ENSAMEG00000008953) #26	MTUS2 (ENSAMEG00000008934) #27	SLC7A1 (ENSAMEG00000008899) #28	UBL3 (ENSAMEG00000008894) #29	ENSAMEG00000008885 #30	ENSAMEG00000008873 #34	ALOX5AP (ENSAMEG00000023710) #35	MEDAG (ENSAMEG00000008847) #36	TEX26 (ENSAMEG00000008839) #37	ENSAMEG00000008833	HSPH1 (ENSAMEG00000008784)	B3GLCT (ENSAMEG00000008757)	RXFP2 (ENSAMEG00000008702)
Ursus	ANCESTRAL SPECIES	57	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00940000158713 #23	ENSGT00390000010734.j.b #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000159635	ENSGT00940000155499
American black bear	MODERN SPECIES	664																ENSUAMG00000023233 #22	FLT1 (ENSUAMG00000023232) #23
Polar bear	MODERN SPECIES	177	CDK8 (ENSUMAG00000016849)	WASF3 (ENSUMAG00000016859)	GPR12 (ENSUMAG00000016877)	USP12 (ENSUMAG00000016883)	ENSUMAG00000016901	ENSUMAG00000016903	ENSUMAG00000016908 ##8	RASL11A (ENSUMAG00000016927) #9	GTF3A (ENSUMAG00000016941) #10	MTIF3 (ENSUMAG00000016954) #11	LNX2 (ENSUMAG00000016959) #13	POLR1D (ENSUMAG00000016968)	ENSUMAG00000016971 #14	ENSUMAG00000016976 #17	FLT3 (ENSUMAG00000016979) #19	PAN3 (ENSUMAG00000016986) #22	ENSUMAG00000017000	ENSUMAG00000017006 #23	POMP (ENSUMAG00000017026) #25	SLC46A3 (ENSUMAG00000017030) #26	ENSUMAG00000017046 #27	SLC7A1 (ENSUMAG00000017056) #28	UBL3 (ENSUMAG00000017145) #29	KATNAL1 (ENSUMAG00000017153) #30	ENSUMAG00000017165 ##33	USPL1 (ENSUMAG00000017198) #34	ENSUMAG00000017201 #35	MEDAG (ENSUMAG00000017210) #36	TEX26 (ENSUMAG00000017213) #37	HSPH1 (ENSUMAG00000017368)	B3GLCT (ENSUMAG00000017840)
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00740000117041	ENSGT00940000162967	ENSGT00940000159635
Afrotheria	ANCESTRAL SPECIES	89	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000161261 #17	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37
Tenrec	MODERN SPECIES	597																ENSETEG00000019591 #22
Afrotheria_a	ANCESTRAL SPECIES	90	ENSGT00940000165049	ENSGT00940000158530	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00390000003643 #14	ENSGT00940000161261 #17	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.e.b.a.a.a ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37
Hyrax	MODERN SPECIES	3887																PAN3 (ENSPCAG00000001143) #22
Elephant	MODERN SPECIES	294	RNF6 (ENSLAFG00000029161)	CDK8 (ENSLAFG00000006771)	WASF3 (ENSLAFG00000018395)	GPR12 (ENSLAFG00000014464)	ENSLAFG00000028761	USP12 (ENSLAFG00000007202)	ENSLAFG00000003677 ##8	RASL11A (ENSLAFG00000003673) #9	GTF3A (ENSLAFG00000027315) #10	MTIF3 (ENSLAFG00000015496) #11	LNX2 (ENSLAFG00000015044) #13	POLR1D (ENSLAFG00000032290)	ENSLAFG00000022071 #14	CDX2 (ENSLAFG00000030146) #17	FLT3 (ENSLAFG00000015599) #19	PAN3 (ENSLAFG00000015614) #22	FLT1 (ENSLAFG00000015622) #23	POMP (ENSLAFG00000003665) #25	SLC46A3 (ENSLAFG00000009925) #26	ENSLAFG00000016168 #27	SLC7A1 (ENSLAFG00000016186) #28	UBL3 (ENSLAFG00000000781) #29	KATNAL1 (ENSLAFG00000003140) #30	HMGB1 (ENSLAFG00000000269) ##33	USPL1 (ENSLAFG00000007634) #34	ALOX5AP (ENSLAFG00000018481) #35	MEDAG (ENSLAFG00000018412) #36	TEX26 (ENSLAFG00000025765) #37	UBAC2 (ENSLAFG00000007662)	GPR18 (ENSLAFG00000007667)	GPR183 (ENSLAFG00000022160)
Xenarthra	ANCESTRAL SPECIES	208			ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00550000075160	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144	ENSGT00970000194118
Sloth	MODERN SPECIES	4232																PAN3 (ENSCHOG00000011265) #22
Armadillo	MODERN SPECIES	1567	WASF3 (ENSDNOG00000002618)	GPR12 (ENSDNOG00000017683)	ENSDNOG00000043479	RASL11A (ENSDNOG00000010166) #9	ENSDNOG00000041047	ENSDNOG00000037405 #10	MTIF3 (ENSDNOG00000037641) #11	LNX2 (ENSDNOG00000006927) #13	ENSDNOG00000043676	ENSDNOG00000044869	GSX1 (ENSDNOG00000011821) #15	PDX1 (ENSDNOG00000003213) #16	CDX2 (ENSDNOG00000035260) #17	ENSDNOG00000046210	FLT3 (ENSDNOG00000001582) #19	PAN3 (ENSDNOG00000017391) #22	ENSDNOG00000031252	ENSDNOG00000036523	SLC46A3 (ENSDNOG00000000330) #26	ENSDNOG00000031980
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647 #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.f ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Opossum	MODERN SPECIES	3	CDK8 (ENSMODG00000008753)	WASF3 (ENSMODG00000008795)	ENSMODG00000008874	RPL21 (ENSMODG00000008923) ##8	RASL11A (ENSMODG00000008941) #9	GTF3A (ENSMODG00000008955) #10	ENSMODG00000008962 #11	ENSMODG00000050662	LNX2 (ENSMODG00000008989) #13	ENSMODG00000047217 #14	GSX1 (ENSMODG00000009010) #15	ENSMODG00000009015	CDX2 (ENSMODG00000009021) #17	URAD (ENSMODG00000039216)	FLT3 (ENSMODG00000009045) #19	PAN3 (ENSMODG00000009065) #22	FLT1 (ENSMODG00000009128) #23	POMP (ENSMODG00000009139) #25	SLC46A3 (ENSMODG00000009152) #26	MTUS2 (ENSMODG00000009167) #27	SLC7A1 (ENSMODG00000009198) #28	ENSMODG00000009203	UBL3 (ENSMODG00000037463) #29	KATNAL1 (ENSMODG00000009220) #30	ENSMODG00000048360	ENSMODG00000009238 ##33	ENSMODG00000009262 #34	ALOX5AP (ENSMODG00000009265) #35	MEDAG (ENSMODG00000009294) #36	ENSMODG00000041498	ENSMODG00000009305
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647.u #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.f ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Tasmanian devil	MODERN SPECIES	2	CDK8 (ENSSHAG00000012149)	WASF3 (ENSSHAG00000013579)	GPR12 (ENSSHAG00000030631)	USP12 (ENSSHAG00000016123)	RPL21 (ENSSHAG00000000845) ##8	RASL11A (ENSSHAG00000016468) #9	GTF3A (ENSSHAG00000016965) #10	ENSSHAG00000017006 #11	LNX2 (ENSSHAG00000017242) #13	ENSSHAG00000025491 #14	GSX1 (ENSSHAG00000029989) #15	ENSSHAG00000017812	CDX2 (ENSSHAG00000017862) #17	ENSSHAG00000024737	FLT3 (ENSSHAG00000017900) #19	PAN3 (ENSSHAG00000018065) #22	ENSSHAG00000029371	ENSSHAG00000018212 #23	POMP (ENSSHAG00000030814) #25	SLC46A3 (ENSSHAG00000018516) #26	MTUS2 (ENSSHAG00000003528) #27	SLC7A1 (ENSSHAG00000005902) #28	UBL3 (ENSSHAG00000026625) #29	KATNAL1 (ENSSHAG00000025350) #30	ENSSHAG00000014034 ##33	ENSSHAG00000014789 #34	ALOX5AP (ENSSHAG00000015184) #35	MEDAG (ENSSHAG00000027393) #36	ENSSHAG00000016069 #37	HSPH1 (ENSSHAG00000016697)	ENSSHAG00000028294
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647.u #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.f ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT00940000157104	ENSGT00950000182962.a.a	ENSGT01060000248564.b.a.b.a	ENSGT00940000153284.a	ENSGT00950000182922.a.a.a.b.a.b.b ##8	ENSGT00940000161208 #9	ENSGT00940000155647.u #10	ENSGT00390000014424 #11	ENSGT00940000158381 #13	ENSGT00390000003643 #14	ENSGT00940000154361.A #15	ENSGT00940000162542 #16	ENSGT00940000161261 #17	ENSGT00390000002395	ENSGT00940000160575 #19	ENSGT00390000001504 #22	ENSGT00940000164144.g	ENSGT00940000158713 #23	ENSGT00390000010734 #25	ENSGT00950000183096.a.a.c.b #26	ENSGT00950000183026.B #27	ENSGT00940000155349 #28	ENSGT00390000004952.b #29	ENSGT00940000156630 #30	ENSGT00950000183120.f ##33	ENSGT00390000002316 #34	ENSGT00940000158706 #35	ENSGT00390000018451 #36	ENSGT00390000009484 #37	ENSGT00940000162967	ENSGT00940000159635
koala	MODERN SPECIES	66	CDK8 (ENSPCIG00000017352)	WASF3 (ENSPCIG00000037264)	GPR12 (ENSPCIG00000023230)	USP12 (ENSPCIG00000022249)	RPL21 (ENSPCIG00000022238) ##8	RASL11A (ENSPCIG00000031842) #9	GTF3A (ENSPCIG00000022226) #10	MTIF3 (ENSPCIG00000022222) #11	LNX2 (ENSPCIG00000022213) #13	ENSPCIG00000022208 #14	GSX1 (ENSPCIG00000022205) #15	PDX1 (ENSPCIG00000022204) #16	CDX2 (ENSPCIG00000022200) #17	ENSPCIG00000022197	FLT3 (ENSPCIG00000022190) #19	PAN3 (ENSPCIG00000022181) #22	ENSPCIG00000022165	ENSPCIG00000036587 #23	ENSPCIG00000032952	ENSPCIG00000022156 #25	SLC46A3 (ENSPCIG00000022153) #26	MTUS2 (ENSPCIG00000003294) #27	SLC7A1 (ENSPCIG00000003318) #28	UBL3 (ENSPCIG00000003332) #29	KATNAL1 (ENSPCIG00000021438) #30	ENSPCIG00000021432 ##33	USPL1 (ENSPCIG00000019844) #34	ALOX5AP (ENSPCIG00000019847) #35	MEDAG (ENSPCIG00000012205) #36	ENSPCIG00000012206 #37	ENSPCIG00000026818
Common wonbat	MODERN SPECIES	1049	CDK8 (ENSVURG00010020617)	WASF3 (ENSVURG00010020608)	ENSVURG00010020587	ENSVURG00010020571 ##8	RASL11A (ENSVURG00010020566) #9	ENSVURG00010020554 #10	ENSVURG00010020547 #11	LNX2 (ENSVURG00010020536) #13	ENSVURG00010020531 #14	GSX1 (ENSVURG00010020523) #15	ENSVURG00010020522	PDX1 (ENSVURG00010020518) #16	CDX2 (ENSVURG00010020516) #17	ENSVURG00010020509	FLT3 (ENSVURG00010020490) #19	PAN3 (ENSVURG00010020471) #22	FLT1 (ENSVURG00010020423) #23	POMP (ENSVURG00010020395) #25	SLC46A3 (ENSVURG00010020388) #26	ENSVURG00010020380	ENSVURG00010020337 #27	SLC7A1 (ENSVURG00010020318) #28	UBL3 (ENSVURG00010020310) #29	ENSVURG00010020303	KATNAL1 (ENSVURG00010020293) #30	ENSVURG00010020283 ##33	ENSVURG00010020274 #34	ALOX5AP (ENSVURG00010020266) #35	MEDAG (ENSVURG00010020258) #36	ENSVURG00010020246 #37	ENSVURG00010020232
Wallaby	MODERN SPECIES	1213																ENSMEUG00000011366 #22