Sarcopterygii ANCESTRAL SPECIES 24 ENSGT00410000026495.C ENSGT00390000018731 ENSGT00940000160874 ENSGT00390000013260.B ENSGT00390000003596 ENSGT00390000004169 ENSGT00950000182961.a.a.a ENSGT00940000160948 ENSGT00950000182983.A.a.a ENSGT00940000160989 ENSGT00940000163996 ENSGT00950000183060.a.b.a ENSGT00390000003718 ENSGT00940000155761 ENSGT00940000161435.b ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT00390000001055 ENSGT00390000017136 ENSGT00940000156544.a ENSGT00390000006167 ENSGT00940000158269 ENSGT01030000234586.B.a.a ENSGT01080000257365.a ENSGT00940000157836 ENSGT00940000158172 ENSGT00940000166249 ENSGT00950000182951.A.b ENSGT00940000155148.b ENSGT00950000183183.a ##16 ENSGT00940000156833 Tetrapoda ANCESTRAL SPECIES 30 ENSGT00410000026495.C ENSGT00390000018731 ENSGT00940000160874 ENSGT00390000013260.B ENSGT00390000003596 ENSGT00390000004169 ENSGT00950000182961.a.a.a ENSGT00940000160948 ENSGT00950000182983.A.a.a ENSGT00940000160989 ENSGT00940000163996 ENSGT00950000183060.a.b.a ENSGT00390000003718 ENSGT00940000155761 ENSGT00940000161435.b ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT00390000001055 ENSGT00390000017136 ENSGT00940000156544.a ENSGT00390000006167 ENSGT00940000158269 ENSGT01030000234586.B.a.a ENSGT01080000257365.a ENSGT00940000157836 ENSGT00940000158172 ENSGT00940000162673 ENSGT00940000166249 ENSGT00950000182951.A.b ENSGT00940000155148.b ENSGT00950000183183.a ##16 Amniota ANCESTRAL SPECIES 11 ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00390000013965 ENSGT01090000260051.b.a.b ENSGT00940000157017.a.b.a ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Mammalia ANCESTRAL SPECIES 11 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Theria ANCESTRAL SPECIES 10 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Eutheria ANCESTRAL SPECIES 22 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 Boreoeutheria ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Euarchontoglires ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 Primates ANCESTRAL SPECIES 11 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 Haplorrhini ANCESTRAL SPECIES 26 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 Simiiformes ANCESTRAL SPECIES 26 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b #32 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Catarrhini ANCESTRAL SPECIES 6 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.n ##19 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.a.d ##23 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.c #33 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.a.c.b ##23 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.a.c.b ##23 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b Cercopithecinae_b ANCESTRAL SPECIES 36 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Cercopithecinae_d ANCESTRAL SPECIES 75 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.c.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.b.c.a #33 ENSGT00950000182958.a.b.b.i.a #36 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Drill MODERN SPECIES 930 TECPR1 (ENSMLEG00000033546) #7 BRI3 (ENSMLEG00000038264) #8 BAIAP2L1 (ENSMLEG00000030011) #9 NPTX2 (ENSMLEG00000034636) #10 TMEM130 (ENSMLEG00000024016) #11 TRRAP (ENSMLEG00000020926) #12 SMURF1 (ENSMLEG00000041278) #13 KPNA7 (ENSMLEG00000041680) #14 ENSMLEG00000036464 #15 ARPC1A (ENSMLEG00000031614) #16 ENSMLEG00000041405 #17 ENSMLEG00000031168 #18 ENSMLEG00000029041 #19 BUD31 (ENSMLEG00000035118) #20 PTCD1 (ENSMLEG00000031179) #21 CPSF4 (ENSMLEG00000034721) #22 ATP5MF (ENSMLEG00000043000) #23 ZNF394 (ENSMLEG00000040037) #24 ZNF789 (ENSMLEG00000041142) #25 ZKSCAN5 (ENSMLEG00000034683) #26 FAM200A (ENSMLEG00000001071) #27 ZNF655 (ENSMLEG00000041871) #28 TMEM225B (ENSMLEG00000037236) #29 ZSCAN25 (ENSMLEG00000006141) #30 CYP3A5 (ENSMLEG00000042908) #31 CYP3A67 (ENSMLEG00000035821) #32 CYP3A7 (ENSMLEG00000042648) #33 ENSMLEG00000042657 #34 CYP3A4 (ENSMLEG00000032310) #35 CYP3A43 (ENSMLEG00000038120) #36 TRIM4 (ENSMLEG00000043935) #37 Sooty mangabey MODERN SPECIES 630 BHLHA15 (ENSCATG00000021737) TECPR1 (ENSCATG00000043836) #7 BRI3 (ENSCATG00000039656) #8 BAIAP2L1 (ENSCATG00000033297) #9 NPTX2 (ENSCATG00000035885) #10 TMEM130 (ENSCATG00000034901) #11 TRRAP (ENSCATG00000032049) #12 SMURF1 (ENSCATG00000019164) #13 KPNA7 (ENSCATG00000016098) #14 ENSCATG00000045237 #15 ARPC1A (ENSCATG00000034511) #16 ARPC1B (ENSCATG00000037261) #17 ENSCATG00000037918 #19 BUD31 (ENSCATG00000042456) #20 PTCD1 (ENSCATG00000040859) #21 CPSF4 (ENSCATG00000038440) #22 ENSCATG00000030778 ENSCATG00000040640 #23 ZNF789 (ENSCATG00000042095) #25 ZNF394 (ENSCATG00000042636) #24 ZKSCAN5 (ENSCATG00000043807) #26 FAM200A (ENSCATG00000007135) #27 ZNF655 (ENSCATG00000041092) #28 TMEM225B (ENSCATG00000038153) #29 ZSCAN25 (ENSCATG00000010757) #30 CYP3A7 (ENSCATG00000036704) #33 CYP3A43 (ENSCATG00000033186) #36 TRIM4 (ENSCATG00000043750) #37 GJC3 (ENSCATG00000039961) AZGP1 (ENSCATG00000041489) ZKSCAN1 (ENSCATG00000039552) Olive baboon MODERN SPECIES 14 LMTK2 (ENSPANG00000023289) BHLHA15 (ENSPANG00000010823) TECPR1 (ENSPANG00000020539) #7 BRI3 (ENSPANG00000015667) #8 BAIAP2L1 (ENSPANG00000024563) #9 NPTX2 (ENSPANG00000009445) #10 TMEM130 (ENSPANG00000009013) #11 TRRAP (ENSPANG00000006931) #12 SMURF1 (ENSPANG00000023126) #13 KPNA7 (ENSPANG00000021499) #14 ARPC1A (ENSPANG00000032757) #16 ARPC1B (ENSPANG00000023245) #17 ENSPANG00000025132 #19 BUD31 (ENSPANG00000006779) #20 PTCD1 (ENSPANG00000016730) #21 CPSF4 (ENSPANG00000023123) #22 ENSPANG00000030778 #23 ENSPANG00000009919 #24 ZNF789 (ENSPANG00000009920) #25 ZKSCAN5 (ENSPANG00000000548) #26 FAM200A (ENSPANG00000018803) #27 ENSPANG00000018842 TMEM225B (ENSPANG00000008632) #29 ZSCAN25 (ENSPANG00000023896) #30 CYP3A5 (ENSPANG00000023122) #31 CYP3A7 (ENSPANG00000008155) #32 CYP3A4 (ENSPANG00000017641) #35 CYP3A43 (ENSPANG00000022197) #36 OR2AE1 (ENSPANG00000047108) TRIM4 (ENSPANG00000006101) #37 GJC3 (ENSPANG00000026070) Macaca ANCESTRAL SPECIES 3 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.a.c.a.b #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.c.b #34 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Pig-tailed macaque MODERN SPECIES 80 BHLHA15 (ENSMNEG00000021350) TECPR1 (ENSMNEG00000039715) #7 BRI3 (ENSMNEG00000000029) #8 BAIAP2L1 (ENSMNEG00000027564) #9 NPTX2 (ENSMNEG00000031035) #10 TMEM130 (ENSMNEG00000034143) #11 TRRAP (ENSMNEG00000011245) #12 SMURF1 (ENSMNEG00000030527) #13 KPNA7 (ENSMNEG00000043325) #14 ENSMNEG00000043344 #15 ARPC1A (ENSMNEG00000045309) #16 ARPC1B (ENSMNEG00000032941) #17 ENSMNEG00000038469 #19 BUD31 (ENSMNEG00000034239) #20 PTCD1 (ENSMNEG00000043786) #21 CPSF4 (ENSMNEG00000032306) #22 ENSMNEG00000044753 #23 ZNF394 (ENSMNEG00000044404) #24 ZNF789 (ENSMNEG00000034945) #25 ZKSCAN5 (ENSMNEG00000036993) #26 FAM200A (ENSMNEG00000009524) #27 ZNF655 (ENSMNEG00000032786) #28 TMEM225B (ENSMNEG00000039756) #29 ZSCAN25 (ENSMNEG00000026859) #30 CYP3A5 (ENSMNEG00000029025) #31 ENSMNEG00000019082 #34 CYP3A4 (ENSMNEG00000031776) #32 CYP3A43 (ENSMNEG00000025630) #36 TRIM4 (ENSMNEG00000032676) #37 GJC3 (ENSMNEG00000035274) AZGP1 (ENSMNEG00000040357) Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000167990.a ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT01100000263539.b.a.a.a.a.b.a.b.b.a.d.a ENSGT00950000183188.A.b #11 ENSGT01080000257579.b.b.b.a.b ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT01100000263539.b.a.a.a.a.a.a.a.b.b.b.a.b.b ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.a.c.b ##23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.d #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Crab-eating macaque MODERN SPECIES 13 ENSMFAG00000047721 TMEM130 (ENSMFAG00000040311) #11 ENSMFAG00000063130 TRRAP (ENSMFAG00000039475) #12 SMURF1 (ENSMFAG00000033436) #13 KPNA7 (ENSMFAG00000031709) #14 ENSMFAG00000062641 ENSMFAG00000052918 ARPC1A (ENSMFAG00000003138) #16 ARPC1B (ENSMFAG00000046299) #17 ENSMFAG00000053643 ENSMFAG00000003092 #19 BUD31 (ENSMFAG00000035579) #20 PTCD1 (ENSMFAG00000041324) #21 ENSMFAG00000051467 CPSF4 (ENSMFAG00000001462) #22 ENSMFAG00000036062 ##23 ZNF789 (ENSMFAG00000041302) #25 ZNF394 (ENSMFAG00000045342) #24 ZKSCAN5 (ENSMFAG00000037519) #26 FAM200A (ENSMFAG00000030317) #27 ZNF655 (ENSMFAG00000037712) #28 TMEM225B (ENSMFAG00000045372) #29 ZSCAN25 (ENSMFAG00000046015) #30 ENSMFAG00000054128 ENSMFAG00000048200 CYP3A5 (ENSMFAG00000062917) #31 CYP3A7 (ENSMFAG00000053006) #32 CYP3A4 (ENSMFAG00000047569) #35 CYP3A43 (ENSMFAG00000039406) #36 OR2AE1 (ENSMFAG00000036704) Rhesus MODERN SPECIES 13 BRI3 (ENSMMUG00000049558) BAIAP2L1 (ENSMMUG00000013276) #9 NPTX2 (ENSMMUG00000011970) #10 ENSMMUG00000059873 TMEM130 (ENSMMUG00000012377) #11 ENSMMUG00000055827 TRRAP (ENSMMUG00000023318) #12 SMURF1 (ENSMMUG00000009183) #13 ENSMMUG00000054851 KPNA7 (ENSMMUG00000019445) #14 ENSMMUG00000056270 ARPC1A (ENSMMUG00000001458) #16 PDAP1 (ENSMMUG00000001460) #19 BUD31 (ENSMMUG00000000427) #20 PTCD1 (ENSMMUG00000030408) #21 CPSF4 (ENSMMUG00000019191) #22 ZNF789 (ENSMMUG00000020139) #25 ZNF394 (ENSMMUG00000020140) #24 ZKSCAN5 (ENSMMUG00000020141) #26 FAM200A (ENSMMUG00000019104) #27 ZNF655 (ENSMMUG00000040393) #28 TMEM225B (ENSMMUG00000055483) #29 ZSCAN25 (ENSMMUG00000022728) #30 CYP3A7 (ENSMMUG00000022730) #32 ENSMMUG00000060678 ENSMMUG00000050824 CYP3A43 (ENSMMUG00000022490) #36 OR2AE1 (ENSMMUG00000063929) TRIM4 (ENSMMUG00000022502) #37 GJC3 (ENSMMUG00000022503) AZGP1 (ENSMMUG00000022504) Vervet Monkey MODERN SPECIES 20 PMS2 (ENSCSAG00000017741) LMTK2 (ENSCSAG00000017746) BHLHA15 (ENSCSAG00000019492) TECPR1 (ENSCSAG00000017751) #7 BRI3 (ENSCSAG00000017754) #8 BAIAP2L1 (ENSCSAG00000017756) #9 NPTX2 (ENSCSAG00000017758) #10 TMEM130 (ENSCSAG00000017759) #11 TRRAP (ENSCSAG00000017767) #12 SMURF1 (ENSCSAG00000017771) #13 KPNA7 (ENSCSAG00000017780) #14 ARPC1A (ENSCSAG00000017788) ##16 ENSCSAG00000017792 #19 BUD31 (ENSCSAG00000017793) #20 PTCD1 (ENSCSAG00000017794) #21 CPSF4 (ENSCSAG00000017795) #22 ZNF789 (ENSCSAG00000017796) #25 ZNF394 (ENSCSAG00000017799) #24 ZKSCAN5 (ENSCSAG00000017802) #26 FAM200A (ENSCSAG00000019491) #27 ZNF655 (ENSCSAG00000017804) #28 TMEM225B (ENSCSAG00000017806) #29 ZSCAN25 (ENSCSAG00000017807) #30 CYP3A5 (ENSCSAG00000017809) #31 CYP3A7 (ENSCSAG00000017821) #33 ENSCSAG00000017824 ##31 ENSCSAG00000017825 #32 CYP3A43 (ENSCSAG00000017826) #36 OR2AE1 (ENSCSAG00000019490) TRIM4 (ENSCSAG00000017827) #37 GJC3 (ENSCSAG00000019489) Rhinopithecus ANCESTRAL SPECIES 46 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b.`b #17 ENSGT00390000018509.a.m #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.a.d.d ##23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.c #33 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Black snub-nosed monkey MODERN SPECIES 814 MYO5C (ENSRBIG00000036923) ENSRBIG00000044666 GNB5 (ENSRBIG00000041062) BCL2L10 (ENSRBIG00000039361) ENSRBIG00000021165 ENSRBIG00000041787 LEO1 (ENSRBIG00000036945) ENSRBIG00000043764 TMOD3 (ENSRBIG00000043218) TMOD2 (ENSRBIG00000035530) LYSMD2 (ENSRBIG00000033395) SCG3 (ENSRBIG00000039621) ENSRBIG00000030362 #19 BUD31 (ENSRBIG00000044457) #20 PTCD1 (ENSRBIG00000043393) #21 CPSF4 (ENSRBIG00000033886) #22 ENSRBIG00000040611 ##23 ZNF394 (ENSRBIG00000036523) #24 ZNF789 (ENSRBIG00000030268) #25 ZKSCAN5 (ENSRBIG00000013383) #26 FAM200A (ENSRBIG00000027570) #27 ZNF655 (ENSRBIG00000040289) #28 TMEM225B (ENSRBIG00000027495) #29 ENSRBIG00000040721 ZSCAN25 (ENSRBIG00000025241) #30 CYP3A7 (ENSRBIG00000042537) #33 CYP3A5 (ENSRBIG00000037822) #31 CYP3A43 (ENSRBIG00000029718) #36 TRIM4 (ENSRBIG00000044371) #37 GJC3 (ENSRBIG00000038094) AZGP1 (ENSRBIG00000033971) Golden snub-nosed monkey MODERN SPECIES 1891 TMEM130 (ENSRROG00000041705) #11 TRRAP (ENSRROG00000038566) #12 SMURF1 (ENSRROG00000033605) #13 KPNA7 (ENSRROG00000038253) #14 ENSRROG00000029302 #15 ARPC1A (ENSRROG00000034397) #16 ENSRROG00000039173 #17 ENSRROG00000040014 #19 BUD31 (ENSRROG00000036579) #20 PTCD1 (ENSRROG00000036420) #21 CPSF4 (ENSRROG00000040431) #22 ENSRROG00000035599 ##23 ZNF789 (ENSRROG00000024718) #25 ZNF394 (ENSRROG00000034088) #24 ZKSCAN5 (ENSRROG00000034392) #26 FAM200A (ENSRROG00000018629) #27 ZNF655 (ENSRROG00000044389) #28 TMEM225B (ENSRROG00000025234) #29 ZSCAN25 (ENSRROG00000043347) #30 CYP3A5 (ENSRROG00000032359) #31 ENSRROG00000042643 #33 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.n.a ##19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.a.a #32 ENSGT00950000182958.a.b.b.i.b.b.c.b.a.b #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 Hominidae ANCESTRAL SPECIES 26 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486.g.a #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.n.a ##19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.a.a #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00510000047886.a #7 ENSGT00510000048486.g.a #8 ENSGT00940000153560.b.b.a #9 ENSGT00950000183087.A.a.b.a.g.b.a.b ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.n.a ##19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.a.a #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b Gorilla MODERN SPECIES 20 BAIAP2L1 (ENSGGOG00000022920) #9 ENSGGOG00000023648 NPTX2 (ENSGGOG00000014713) #10 TMEM130 (ENSGGOG00000016665) #11 TRRAP (ENSGGOG00000002928) #12 SMURF1 (ENSGGOG00000011481) #13 KPNA7 (ENSGGOG00000000414) #14 ENSGGOG00000016797 #15 ENSGGOG00000036592 ##16 ARPC1A (ENSGGOG00000039217) #16 ARPC1B (ENSGGOG00000013186) #17 PDAP1 (ENSGGOG00000025196) ##19 BUD31 (ENSGGOG00000015119) #20 ENSGGOG00000041309 PTCD1 (ENSGGOG00000015123) #21 CPSF4 (ENSGGOG00000015131) #22 ATP5MF (ENSGGOG00000037236) #23 ENSGGOG00000022768 ZNF394 (ENSGGOG00000013650) #24 ZKSCAN5 (ENSGGOG00000009555) #26 FAM200A (ENSGGOG00000001350) #27 ZNF655 (ENSGGOG00000002488) #28 TMEM225B (ENSGGOG00000040673) #29 ZSCAN25 (ENSGGOG00000016950) #30 CYP3A5 (ENSGGOG00000003875) #31 ENSGGOG00000043492 #32 CYP3A4 (ENSGGOG00000003894) #35 CYP3A43 (ENSGGOG00000002076) #36 OR2AE1 (ENSGGOG00000027735) TRIM4 (ENSGGOG00000044005) #37 GJC3 (ENSGGOG00000011401) Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00510000047886.a #7 ENSGT00510000048486.g.a #8 ENSGT00940000153560.b.b.a #9 ENSGT00950000183087.A.a.b.a.g.b.a.b ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.n.a ##19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.a.a #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b Pan ANCESTRAL SPECIES 13 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486.g.a #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.y.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.n.a ##19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00390000002944.e.b ENSGT00510000046986.n.a.a.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441.a #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000156593.wc.a ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b.c.b.a.a #32 ENSGT00950000182958.a.b.b.i.b.b.c.a #35 ENSGT00950000182958.a.b.b.i.a #36 ENSGT01090000260018.B.b Bonobo MODERN SPECIES 20 BHLHA15 (ENSPPAG00000038305) TECPR1 (ENSPPAG00000036532) #7 ENSPPAG00000031565 #8 BAIAP2L1 (ENSPPAG00000037144) #9 ENSPPAG00000032935 #10 TMEM130 (ENSPPAG00000016661) #11 TRRAP (ENSPPAG00000036292) #12 SMURF1 (ENSPPAG00000031727) #13 KPNA7 (ENSPPAG00000040756) #14 ENSPPAG00000032160 #15 ARPC1A (ENSPPAG00000032222) #16 ARPC1B (ENSPPAG00000029449) #17 PDAP1 (ENSPPAG00000031378) ##19 BUD31 (ENSPPAG00000040700) #20 PTCD1 (ENSPPAG00000036024) #21 CPSF4 (ENSPPAG00000043355) #22 ENSPPAG00000042587 ATP5MF (ENSPPAG00000036976) #23 ZNF789 (ENSPPAG00000040508) #25 ZNF394 (ENSPPAG00000036746) #24 ZKSCAN5 (ENSPPAG00000035814) #26 FAM200A (ENSPPAG00000025979) #27 ZNF655 (ENSPPAG00000041610) #28 TMEM225B (ENSPPAG00000040983) #29 ZSCAN25 (ENSPPAG00000043285) #30 ENSPPAG00000035255 CYP3A5 (ENSPPAG00000038928) #31 CYP3A67 (ENSPPAG00000030737) #32 CYP3A4 (ENSPPAG00000038840) #35 CYP3A43 (ENSPPAG00000022863) #36 OR2AE1 (ENSPPAG00000016879) Chimpanzee MODERN SPECIES 20 TECPR1 (ENSPTRG00000028478) #7 BRI3 (ENSPTRG00000019436) #8 BAIAP2L1 (ENSPTRG00000019438) #9 ENSPTRG00000049708 NPTX2 (ENSPTRG00000019440) #10 TMEM130 (ENSPTRG00000045055) #11 TRRAP (ENSPTRG00000019442) #12 SMURF1 (ENSPTRG00000019444) #13 KPNA7 (ENSPTRG00000019446) #14 MYH16 (ENSPTRG00000052047) #15 ARPC1A (ENSPTRG00000033819) #16 ARPC1B (ENSPTRG00000019449) #17 PDAP1 (ENSPTRG00000041711) ##19 BUD31 (ENSPTRG00000019451) #20 PTCD1 (ENSPTRG00000019452) #21 CPSF4 (ENSPTRG00000019453) #22 ENSPTRG00000046696 ATP5MF (ENSPTRG00000044099) #23 ZNF789 (ENSPTRG00000023303) #25 ZNF394 (ENSPTRG00000019456) #24 ZKSCAN5 (ENSPTRG00000019455) #26 FAM200A (ENSPTRG00000042511) #27 ZNF655 (ENSPTRG00000048790) #28 TMEM225B (ENSPTRG00000043828) #29 ZSCAN25 (ENSPTRG00000023744) #30 ENSPTRG00000047408 CYP3A5 (ENSPTRG00000019458) #31 CYP3A7 (ENSPTRG00000019459) #32 CYP3A4 (ENSPTRG00000033773) #35 CYP3A43 (ENSPTRG00000048873) #36 OR2AE1 (ENSPTRG00000019462) Human MODERN SPECIES 19 TECPR1 (ENSG00000205356) #7 BRI3 (ENSG00000164713) #8 BAIAP2L1 (ENSG00000006453) #9 NPTX2 (ENSG00000106236) #10 TMEM130 (ENSG00000166448) #11 TRRAP (ENSG00000196367) #12 SMURF1 (ENSG00000198742) #13 KPNA7 (ENSG00000185467) #14 ENSG00000284292 ARPC1A (ENSG00000241685) #16 ARPC1B (ENSG00000130429) #17 PDAP1 (ENSG00000106244) ##19 BUD31 (ENSG00000106245) #20 PTCD1 (ENSG00000106246) #21 ATP5MF-PTCD1 (ENSG00000248919) CPSF4 (ENSG00000160917) #22 ATP5MF (ENSG00000241468) #23 ZNF789 (ENSG00000198556) #25 ZNF394 (ENSG00000160908) #24 ZKSCAN5 (ENSG00000196652) #26 FAM200A (ENSG00000221909) #27 ZNF655 (ENSG00000197343) #28 TMEM225B (ENSG00000244219) #29 ZSCAN25 (ENSG00000197037) #30 CYP3A5 (ENSG00000106258) #31 CYP3A7-CYP3A51P (ENSG00000282301) CYP3A7 (ENSG00000160870) #32 CYP3A4 (ENSG00000160868) #35 CYP3A43 (ENSG00000021461) #36 OR2AE1 (ENSG00000244623) TRIM4 (ENSG00000146833) #37 Orangutan MODERN SPECIES 20 LMTK2 (ENSPPYG00000017360) BHLHA15 (ENSPPYG00000017361) TECPR1 (ENSPPYG00000017362) #7 ENSPPYG00000037940 #8 BAIAP2L1 (ENSPPYG00000017363) #9 NPTX2 (ENSPPYG00000029795) #10 TMEM130 (ENSPPYG00000017365) #11 TRRAP (ENSPPYG00000017366) #12 SMURF1 (ENSPPYG00000017368) #13 KPNA7 (ENSPPYG00000017369) #14 ARPC1A (ENSPPYG00000025816) #16 ARPC1B (ENSPPYG00000017374) #17 ENSPPYG00000017375 ##19 BUD31 (ENSPPYG00000017376) #20 PTCD1 (ENSPPYG00000017377) #21 CPSF4 (ENSPPYG00000017378) #22 ENSPPYG00000041797 ATP5MF (ENSPPYG00000017379) #23 ZNF789 (ENSPPYG00000041347) #25 ZNF394 (ENSPPYG00000017381) #24 ZKSCAN5 (ENSPPYG00000017382) #26 FAM200A (ENSPPYG00000017383) #27 ZNF655 (ENSPPYG00000017384) #28 TMEM225B (ENSPPYG00000033654) #29 ZSCAN25 (ENSPPYG00000034484) #30 CYP3A5 (ENSPPYG00000034419) #31 CYP3A7 (ENSPPYG00000032198) #32 ENSPPYG00000031069 #32 CYP3A4 (ENSPPYG00000017390) #35 CYP3A43 (ENSPPYG00000036752) #36 TRIM4 (ENSPPYG00000017391) #37 Gibbon MODERN SPECIES 7 ENSNLEG00000012944 ENSNLEG00000035321 #8 BAIAP2L1 (ENSNLEG00000033877) #9 ENSNLEG00000010697 #10 TMEM130 (ENSNLEG00000010699) #11 TRRAP (ENSNLEG00000027081) #12 SMURF1 (ENSNLEG00000010717) #13 KPNA7 (ENSNLEG00000010827) #14 ENSNLEG00000032444 #15 ARPC1A (ENSNLEG00000010852) #16 ENSNLEG00000026790 #17 PDAP1 (ENSNLEG00000011017) ##19 BUD31 (ENSNLEG00000011020) #20 PTCD1 (ENSNLEG00000011060) #21 ENSNLEG00000011100 CPSF4 (ENSNLEG00000011074) #22 ATP5MF (ENSNLEG00000011101) #23 ZNF789 (ENSNLEG00000011123) #25 ZNF394 (ENSNLEG00000035314) #24 ZKSCAN5 (ENSNLEG00000011141) #26 FAM200A (ENSNLEG00000011174) #27 ZNF655 (ENSNLEG00000030892) #28 TMEM225B (ENSNLEG00000011185) #29 ZSCAN25 (ENSNLEG00000029330) #30 ENSNLEG00000032867 CYP3A5 (ENSNLEG00000035706) #31 CYP3A67 (ENSNLEG00000035532) #32 CYP3A7 (ENSNLEG00000026826) #32 CYP3A4 (ENSNLEG00000011206) #35 ENSNLEG00000011307 ##31 TRIM4 (ENSNLEG00000011309) #37 Platyrrhini ANCESTRAL SPECIES 19 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a.c #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B.i.a #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b.z.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.`b #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b #32 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b Cebidae ANCESTRAL SPECIES 24 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a.c #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B.i.a #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b.z.a #17 ENSGT00950000183183.b.b.z.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.`b #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b #32 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b Cebidae_a ANCESTRAL SPECIES 19 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a.c #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B.i.a #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b.y #17 ENSGT00950000183183.b.b.z.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.`b #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.n.c #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.b.a #31 ENSGT00950000182958.a.b.b.i.b.b #32 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b Capuchin MODERN SPECIES 82 LMTK2 (ENSCCAG00000021992) TECPR1 (ENSCCAG00000022147) #7 BRI3 (ENSCCAG00000022002) #8 BAIAP2L1 (ENSCCAG00000022124) #9 NPTX2 (ENSCCAG00000021986) #10 TMEM130 (ENSCCAG00000021884) #11 TRRAP (ENSCCAG00000031555) #12 SMURF1 (ENSCCAG00000037956) #13 ENSCCAG00000037962 #14 ENSCCAG00000024944 #15 ARPC1A (ENSCCAG00000019780) #16 ENSCCAG00000037322 #17 PDAP1 (ENSCCAG00000031892) #19 BUD31 (ENSCCAG00000021788) #20 PTCD1 (ENSCCAG00000034025) #21 CPSF4 (ENSCCAG00000028291) #22 ENSCCAG00000017059 #23 ENSCCAG00000020703 ZNF394 (ENSCCAG00000027351) #24 ZNF789 (ENSCCAG00000025456) #25 ZKSCAN5 (ENSCCAG00000030902) #26 ZNF655 (ENSCCAG00000022358) #28 TMEM225B (ENSCCAG00000018539) #29 ENSCCAG00000037804 ZSCAN25 (ENSCCAG00000037223) #30 CYP3A5 (ENSCCAG00000034158) #31 CYP3A90 (ENSCCAG00000036748) #31 CYP3A4 (ENSCCAG00000017463) #32 TRIM4 (ENSCCAG00000029392) #37 GJC3 (ENSCCAG00000024102) AZGP1 (ENSCCAG00000033551) Bolivian squirrel monkey MODERN SPECIES 104 ENSSBOG00000021103 LMTK2 (ENSSBOG00000035095) TECPR1 (ENSSBOG00000018971) #7 ENSSBOG00000032858 #8 ENSSBOG00000018064 #9 NPTX2 (ENSSBOG00000029192) #10 TMEM130 (ENSSBOG00000023597) #11 TRRAP (ENSSBOG00000022151) #12 SMURF1 (ENSSBOG00000026488) #13 ENSSBOG00000032329 #14 ENSSBOG00000035988 #15 ARPC1B (ENSSBOG00000017784) #17 ENSSBOG00000035146 #19 BUD31 (ENSSBOG00000027048) #20 PTCD1 (ENSSBOG00000024114) #21 CPSF4 (ENSSBOG00000020493) #22 ATP5MF (ENSSBOG00000032284) #23 ZNF394 (ENSSBOG00000026184) #24 ZNF789 (ENSSBOG00000027974) #25 ZKSCAN5 (ENSSBOG00000020293) #26 ZNF655 (ENSSBOG00000023361) #28 TMEM225B (ENSSBOG00000035101) #29 ZSCAN25 (ENSSBOG00000032849) #30 CYP3A90 (ENSSBOG00000022364) #31 CYP3A5 (ENSSBOG00000030571) #31 CYP3A4 (ENSSBOG00000035505) #32 TRIM4 (ENSSBOG00000032029) #37 GJC3 (ENSSBOG00000022987) AZGP1 (ENSSBOG00000026027) ZKSCAN1 (ENSSBOG00000022013) ZSCAN21 (ENSSBOG00000027308) Marmoset MODERN SPECIES 11 BHLHA15 (ENSCJAG00000023085) TECPR1 (ENSCJAG00000033050) #7 BRI3 (ENSCJAG00000071589) #8 BAIAP2L1 (ENSCJAG00000031937) #9 NPTX2 (ENSCJAG00000015220) #10 ENSCJAG00000078860 TMEM130 (ENSCJAG00000016109) #11 TRRAP (ENSCJAG00000016008) #12 SMURF1 (ENSCJAG00000046325) #13 KPNA7 (ENSCJAG00000015943) #14 ENSCJAG00000015859 #16 ENSCJAG00000015849 #17 PDAP1 (ENSCJAG00000015838) #19 BUD31 (ENSCJAG00000015836) #20 PTCD1 (ENSCJAG00000015815) #21 CPSF4 (ENSCJAG00000015826) #22 ATP5MF (ENSCJAG00000045628) #23 ZNF789 (ENSCJAG00000015813) #25 ZKSCAN5 (ENSCJAG00000015788) #26 ZNF394 (ENSCJAG00000015808) #24 ZNF655 (ENSCJAG00000032195) #28 TMEM225B (ENSCJAG00000033315) #29 ZSCAN25 (ENSCJAG00000015783) #30 CYP3A90 (ENSCJAG00000064350) #31 CYP3A5 (ENSCJAG00000064981) #31 CYP3A4 (ENSCJAG00000015744) #32 TRIM4 (ENSCJAG00000015702) #37 GJC3 (ENSCJAG00000015695) AZGP1 (ENSCJAG00000082690) ZKSCAN1 (ENSCJAG00000046899) ENSCJAG00000076538 Mas night monkey MODERN SPECIES 556 LMTK2 (ENSANAG00000030215) TECPR1 (ENSANAG00000034833) #7 BRI3 (ENSANAG00000027654) #8 ENSANAG00000024350 #9 NPTX2 (ENSANAG00000037968) #10 TMEM130 (ENSANAG00000034905) #11 TRRAP (ENSANAG00000031335) #12 SMURF1 (ENSANAG00000031906) #13 ENSANAG00000024791 #14 ENSANAG00000019992 #15 ARPC1A (ENSANAG00000038029) #16 ENSANAG00000023601 #17 PDAP1 (ENSANAG00000035351) #19 ENSANAG00000027119 #20 PTCD1 (ENSANAG00000035790) #21 CPSF4 (ENSANAG00000021360) #22 ATP5MF (ENSANAG00000021638) #23 ZNF394 (ENSANAG00000030792) #24 ZNF789 (ENSANAG00000028480) #25 ZKSCAN5 (ENSANAG00000032873) #26 ZNF655 (ENSANAG00000029025) #28 TMEM225B (ENSANAG00000035558) #29 ZSCAN25 (ENSANAG00000020427) #30 ENSANAG00000022722 CYP3A5 (ENSANAG00000032272) #31 TRIM4 (ENSANAG00000036020) #37 GJC3 (ENSANAG00000030391) ENSANAG00000027664 Tarsier DUPLICATION Tarsier DUPLICATION Tarsier MODERN SPECIES 3660 ENSTSYG00000008195 #22 Tarsier MODERN SPECIES 36 ENSTSYG00000014604 #22 Tarsier MODERN SPECIES 4203 ENSTSYG00000009967 #15 ARPC1A (ENSTSYG00000003574) #16 ARPC1B (ENSTSYG00000033630) #17 PDAP1 (ENSTSYG00000035864) #19 BUD31 (ENSTSYG00000026135) #20 PTCD1 (ENSTSYG00000029495) #21 CPSF4 (ENSTSYG00000005712) #22 ATP5MF (ENSTSYG00000026376) #23 ZNF394 (ENSTSYG00000013540) #24 ZNF789 (ENSTSYG00000031696) #25 ZKSCAN5 (ENSTSYG00000014107) #26 ZNF655 (ENSTSYG00000002676) #28 TMEM225B (ENSTSYG00000032314) #29 ZSCAN25 (ENSTSYG00000033603) #30 ENSTSYG00000009030 Strepsirrhini ANCESTRAL SPECIES 14 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.a.b #36 ENSGT00950000182958.a.b.b.i.a.a #36 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a.d Lemuriformes ANCESTRAL SPECIES 6 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.s.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.a.a #36 ENSGT00950000182958.a.b.b.i.a.b #36 ENSGT00940000165702 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Mouse lemur MODERN SPECIES 8 BHLHA15 (ENSMICG00000036615) TECPR1 (ENSMICG00000002874) #7 ENSMICG00000043223 #8 BAIAP2L1 (ENSMICG00000002891) #9 NPTX2 (ENSMICG00000002901) #10 TMEM130 (ENSMICG00000002904) #11 TRRAP (ENSMICG00000002909) #12 SMURF1 (ENSMICG00000042244) #13 KPNA7 (ENSMICG00000017420) #14 ENSMICG00000017421 #15 ENSMICG00000017423 #16 ARPC1B (ENSMICG00000017424) #17 PDAP1 (ENSMICG00000017425) #19 ENSMICG00000017426 #20 PTCD1 (ENSMICG00000017428) #21 CPSF4 (ENSMICG00000017429) #22 ENSMICG00000044867 #23 ENSMICG00000034093 ZNF789 (ENSMICG00000005979) #25 ZNF394 (ENSMICG00000005987) #24 ZKSCAN5 (ENSMICG00000005991) #26 ZNF655 (ENSMICG00000006010) #28 TMEM225B (ENSMICG00000029262) #29 ZSCAN25 (ENSMICG00000006018) #30 ENSMICG00000014650 #36 ENSMICG00000006024 #36 TRIM4 (ENSMICG00000005567) #37 AZGP1 (ENSMICG00000030520) ENSMICG00000041812 ZKSCAN1 (ENSMICG00000003957) ZSCAN21 (ENSMICG00000003959) Lemuriformes_a ANCESTRAL SPECIES 16 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.s.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.i.a.a #36 ENSGT00940000165702 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a.d Greater bamboo lemur MODERN SPECIES 522 BHLHA15 (ENSPSMG00000003426) TECPR1 (ENSPSMG00000003451) #7 BRI3 (ENSPSMG00000003477) #8 BAIAP2L1 (ENSPSMG00000003502) #9 NPTX2 (ENSPSMG00000003510) #10 ENSPSMG00000003514 TMEM130 (ENSPSMG00000003560) #11 TRRAP (ENSPSMG00000004004) #12 SMURF1 (ENSPSMG00000004395) #13 KPNA7 (ENSPSMG00000004499) #14 ARPC1A (ENSPSMG00000004536) #16 ARPC1B (ENSPSMG00000004575) #17 PDAP1 (ENSPSMG00000004603) #19 BUD31 (ENSPSMG00000004621) #20 PTCD1 (ENSPSMG00000004631) #21 CPSF4 (ENSPSMG00000004691) #22 ATP5MF (ENSPSMG00000004717) #23 ENSPSMG00000004726 ZNF789 (ENSPSMG00000004734) #25 ENSPSMG00000004745 #24 ZKSCAN5 (ENSPSMG00000004768) #26 ENSPSMG00000004779 FAM200A (ENSPSMG00000004785) #27 ZNF655 (ENSPSMG00000004861) #28 TMEM225B (ENSPSMG00000004872) #29 ZSCAN25 (ENSPSMG00000004884) #30 ENSPSMG00000004900 #36 Coquerels sifaka MODERN SPECIES 155 LMTK2 (ENSPCOG00000025104) TECPR1 (ENSPCOG00000015825) #7 BRI3 (ENSPCOG00000000280) #8 BAIAP2L1 (ENSPCOG00000022611) #9 NPTX2 (ENSPCOG00000024897) #10 TMEM130 (ENSPCOG00000025459) #11 TRRAP (ENSPCOG00000021914) #12 SMURF1 (ENSPCOG00000023089) #13 KPNA7 (ENSPCOG00000026168) #14 ENSPCOG00000017933 #15 ENSPCOG00000013572 #16 ARPC1B (ENSPCOG00000010552) #17 PDAP1 (ENSPCOG00000024638) #19 BUD31 (ENSPCOG00000016931) #20 PTCD1 (ENSPCOG00000018596) #21 CPSF4 (ENSPCOG00000012771) #22 ATP5MF (ENSPCOG00000027298) #23 ZNF789 (ENSPCOG00000020262) #25 ZNF394 (ENSPCOG00000025668) #24 ZKSCAN5 (ENSPCOG00000024797) #26 ZNF655 (ENSPCOG00000017676) #28 TMEM225B (ENSPCOG00000020944) #29 ZSCAN25 (ENSPCOG00000020153) #30 ENSPCOG00000002834 #36 ENSPCOG00000023160 CYP3A201 (ENSPCOG00000018451) #36 CYP3A5 (ENSPCOG00000018679) #36 OR2AE1 (ENSPCOG00000021928) TRIM4 (ENSPCOG00000003840) #37 AZGP1 (ENSPCOG00000028874) ENSPCOG00000025347 Bushbaby MODERN SPECIES 257 BHLHA15 (ENSOGAG00000010106) TECPR1 (ENSOGAG00000010108) #7 ENSOGAG00000000638 #8 BAIAP2L1 (ENSOGAG00000000639) #9 NPTX2 (ENSOGAG00000000640) #10 TMEM130 (ENSOGAG00000000642) #11 TRRAP (ENSOGAG00000000643) #12 SMURF1 (ENSOGAG00000009903) #13 ENSOGAG00000031106 #14 ENSOGAG00000028575 #15 ARPC1A (ENSOGAG00000010870) #16 ARPC1B (ENSOGAG00000010872) #17 ENSOGAG00000010874 #19 BUD31 (ENSOGAG00000010875) #20 PTCD1 (ENSOGAG00000010877) #21 CPSF4 (ENSOGAG00000010884) #22 ENSOGAG00000032002 ZNF394 (ENSOGAG00000025525) #24 ZKSCAN5 (ENSOGAG00000010899) #26 FAM200A (ENSOGAG00000026707) #27 ZNF655 (ENSOGAG00000009915) #28 TMEM225B (ENSOGAG00000032661) #29 ZSCAN25 (ENSOGAG00000011024) #30 CYP3A4 (ENSOGAG00000011021) #36 CYP3A169 (ENSOGAG00000004122) #36 ENSOGAG00000004125 #36 ENSOGAG00000032785 CYP3A91 (ENSOGAG00000015249) #36 OR2AE1 (ENSOGAG00000034244) TRIM4 (ENSOGAG00000010646) #37 GJC3 (ENSOGAG00000016305) Euarchontoglires_A ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 Tree shrew MODERN SPECIES 3419 TMEM130 (ENSTBEG00000001601) #11 TRRAP (ENSTBEG00000002243) #12 SMURF1 (ENSTBEG00000008251) #13 KPNA7 (ENSTBEG00000009007) #14 ENSTBEG00000009317 #15 ARPC1B (ENSTBEG00000009902) #17 PDAP1 (ENSTBEG00000010152) #19 BUD31 (ENSTBEG00000010640) #20 PTCD1 (ENSTBEG00000011021) #21 CPSF4 (ENSTBEG00000011406) #22 ENSTBEG00000012332 #23 Glires ANCESTRAL SPECIES 11 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 Lagomorpha ANCESTRAL SPECIES 54 ENSGT00940000161875 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.b ##31 ENSGT00950000183069.a.a ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a.d ENSGT01100000263517.b.d.m.b.a.a ENSGT01090000260005.a.a.a.a.c ENSGT00940000161592 ENSGT00940000161607 Rabbit MODERN SPECIES 493 NPTX2 (ENSOCUG00000017210) #10 TMEM130 (ENSOCUG00000014924) #11 TRRAP (ENSOCUG00000001829) #12 SMURF1 (ENSOCUG00000016326) #13 KPNA7 (ENSOCUG00000001792) #14 ARPC1A (ENSOCUG00000003944) #16 ARPC1B (ENSOCUG00000025962) #17 PDAP1 (ENSOCUG00000010572) #19 BUD31 (ENSOCUG00000010576) #20 PTCD1 (ENSOCUG00000010584) #21 CPSF4 (ENSOCUG00000002437) #22 ENSOCUG00000015693 #23 ENSOCUG00000038839 ZNF394 (ENSOCUG00000002444) #24 ZKSCAN5 (ENSOCUG00000002447) #26 ZNF655 (ENSOCUG00000007932) #28 ZSCAN25 (ENSOCUG00000007939) #30 ENSOCUG00000025181 ENSOCUG00000024710 CYP3A6 (ENSOCUG00000023380) ##31 ENSOCUG00000027046 ENSOCUG00000035935 ENSOCUG00000026110 ENSOCUG00000038804 ENSOCUG00000034133 TRIM4 (ENSOCUG00000039179) #37 Pika MODERN SPECIES 1043 ARPC1B (ENSOPRG00000013600) #17 PDAP1 (ENSOPRG00000013615) #19 BUD31 (ENSOPRG00000013631) #20 PTCD1 (ENSOPRG00000013647) #21 CPSF4 (ENSOPRG00000013663) #22 ATP5MF (ENSOPRG00000013680) #23 Rodentia ANCESTRAL SPECIES 11 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b Rodentia_A ANCESTRAL SPECIES 10 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b Hystricomorpha ANCESTRAL SPECIES 17 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b ENSGT00950000183073.a.a.b ENSGT01050000244824.C Hystricomorpha_a ANCESTRAL SPECIES 16 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b ENSGT00950000183073.a.a.b ENSGT01050000244824.C Guinea pig MODERN SPECIES 30 LMTK2 (ENSCPOG00000009408) BHLHA15 (ENSCPOG00000033368) TECPR1 (ENSCPOG00000010430) #7 BRI3 (ENSCPOG00000025281) #8 BAIAP2L1 (ENSCPOG00000009274) #9 NPTX2 (ENSCPOG00000012135) #10 TMEM130 (ENSCPOG00000010669) #11 TRRAP (ENSCPOG00000007298) #12 SMURF1 (ENSCPOG00000000124) #13 KPNA7 (ENSCPOG00000014326) #14 ENSCPOG00000001777 #16 ARPC1B (ENSCPOG00000020413) #17 PDAP1 (ENSCPOG00000023217) #19 BUD31 (ENSCPOG00000001779) #20 PTCD1 (ENSCPOG00000001780) #21 CPSF4 (ENSCPOG00000001783) #22 ENSCPOG00000034651 ZNF394 (ENSCPOG00000013321) #24 ZKSCAN5 (ENSCPOG00000032578) #26 ZNF655 (ENSCPOG00000032275) #28 ZSCAN25 (ENSCPOG00000031211) #30 Cyp3a14 (ENSCPOG00000001589) ##31 ENSCPOG00000024937 ##31 ENSCPOG00000012976 ##31 ENSCPOG00000020375 ##31 ENSCPOG00000022315 ##31 GJC3 (ENSCPOG00000012551) AZGP1 (ENSCPOG00000030246) ZKSCAN1 (ENSCPOG00000005770) ZSCAN21 (ENSCPOG00000015351) ZNF3 (ENSCPOG00000010860) Hystricomorpha_b ANCESTRAL SPECIES 55 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 57 CDK15 (ENSODEG00000009574) FZD7 (ENSODEG00000010108) ENSODEG00000012987 NOP58 (ENSODEG00000010151) BMPR2 (ENSODEG00000011132) ENSODEG00000010517 FAM117B (ENSODEG00000010132) ENSODEG00000010913 ENSODEG00000010403 ENSODEG00000009897 ENSODEG00000011455 WDR12 (ENSODEG00000011602) CARF (ENSODEG00000011312) NBEAL1 (ENSODEG00000010440) CYP20A1 (ENSODEG00000010253) ENSODEG00000009779 #22 ABI2 (ENSODEG00000009457) ENSODEG00000013477 CTLA4 (ENSODEG00000009327) ENSODEG00000010295 ICOS (ENSODEG00000011327) ENSODEG00000009131 ENSODEG00000010021 PARD3B (ENSODEG00000012523) ENSODEG00000010455 INO80D (ENSODEG00000009769) ENSODEG00000019630 ENSODEG00000008842 ENSODEG00000009030 ENSODEG00000008974 ENSODEG00000010229 Degu MODERN SPECIES 49 ENSODEG00000018270 CTNND2 (ENSODEG00000018402) DAP (ENSODEG00000018321) ANKRD33B (ENSODEG00000018446) ROPN1L (ENSODEG00000018356) MARCHF6 (ENSODEG00000018354) ENSODEG00000018315 CMBL (ENSODEG00000018386) ENSODEG00000018260 ATPSCKMT (ENSODEG00000018372) ENSODEG00000018296 SEMA5A (ENSODEG00000018380) ENSODEG00000018330 FASTKD3 (ENSODEG00000018378) ADCY2 (ENSODEG00000018279) ENSODEG00000018283 #22 TENT4A (ENSODEG00000018357) SRD5A1 (ENSODEG00000018442) NSUN2 (ENSODEG00000018305) ENSODEG00000018291 UBE2QL1 (ENSODEG00000018284) MED10 (ENSODEG00000018285) ENSODEG00000018433 ENSODEG00000018278 ADAMTS16 (ENSODEG00000018405) IRX1 (ENSODEG00000018349) IRX2 (ENSODEG00000018250) IRX4 (ENSODEG00000018434) NDUFS6 (ENSODEG00000018267) ENSODEG00000018308 LPCAT1 (ENSODEG00000018339) Degu MODERN SPECIES 72 ENSODEG00000011251 ENSODEG00000011077 LMTK2 (ENSODEG00000012233) TECPR1 (ENSODEG00000011578) #7 BRI3 (ENSODEG00000010514) #8 BAIAP2L1 (ENSODEG00000010504) #9 ENSODEG00000012635 NPTX2 (ENSODEG00000011311) #10 TMEM130 (ENSODEG00000010706) #11 TRRAP (ENSODEG00000013196) #12 SMURF1 (ENSODEG00000012098) #13 ENSODEG00000010891 #16 ARPC1B (ENSODEG00000011865) #17 ENSODEG00000012197 #19 BUD31 (ENSODEG00000011226) #20 ENSODEG00000011181 #22 ENSODEG00000012299 ZKSCAN5 (ENSODEG00000012014) #26 ZNF655 (ENSODEG00000011702) #28 ZSCAN25 (ENSODEG00000012099) #30 Long-tailed chinchilla MODERN SPECIES 167 LMTK2 (ENSCLAG00000005806) BHLHA15 (ENSCLAG00000006581) TECPR1 (ENSCLAG00000006941) #7 BRI3 (ENSCLAG00000012095) #8 BAIAP2L1 (ENSCLAG00000013528) #9 NPTX2 (ENSCLAG00000013930) #10 TMEM130 (ENSCLAG00000006489) #11 TRRAP (ENSCLAG00000007110) #12 SMURF1 (ENSCLAG00000005211) #13 KPNA7 (ENSCLAG00000006067) #14 ARPC1A (ENSCLAG00000006964) #16 ARPC1B (ENSCLAG00000006996) #17 PDAP1 (ENSCLAG00000007628) #19 BUD31 (ENSCLAG00000008079) #20 PTCD1 (ENSCLAG00000006354) #21 CPSF4 (ENSCLAG00000007050) #22 ATP5MF (ENSCLAG00000004636) #23 ZNF394 (ENSCLAG00000005098) #24 ZKSCAN5 (ENSCLAG00000006450) #26 ZNF655 (ENSCLAG00000012856) #28 TMEM225B (ENSCLAG00000007073) #29 ZSCAN25 (ENSCLAG00000006740) #30 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES ENSHGLG00000032492 BAIAP2L1 (ENSHGLG00000017707) #9 ENSHGLG00000044552 ENSHGLG00000007737 #10 ENSHGLG00000042548 TMEM130 (ENSHGLG00000008380) #11 TRRAP (ENSHGLG00000013805) #12 SMURF1 (ENSHGLG00000006003) #13 ENSHGLG00000009628 #14 ENSHGLG00000043221 ENSHGLG00000017246 #16 ARPC1B (ENSHGLG00000017816) #17 PDAP1 (ENSHGLG00000013857) #19 ENSHGLG00000018123 #20 PTCD1 (ENSHGLG00000017621) #21 ENSHGLG00000017150 #22 ENSHGLG00000006068 #23 ENSHGLG00000006453 ZNF394 (ENSHGLG00000033544) #24 ZKSCAN5 (ENSHGLG00000009175) #26 ZNF655 (ENSHGLG00000005530) #28 ENSHGLG00000040144 #30 ENSHGLG00000033148 ENSHGLG00000038153 ENSHGLG00000041246 ENSHGLG00000000859 HS3ST5 (ENSHGLG00000045242) ENSHGLG00000001055 ENSHGLG00000045785 ENSHGLG00000038613 ENSHGLG00000048576 Naked mole-rat female MODERN SPECIES 13 ENSHGLG00000009795 ENSHGLG00000018481 ENSHGLG00000039218 ENSHGLG00000042606 SULF1 (ENSHGLG00000015701) SLCO5A1 (ENSHGLG00000007007) ENSHGLG00000047939 PRDM14 (ENSHGLG00000016615) NCOA2 (ENSHGLG00000016603) ENSHGLG00000035853 ENSHGLG00000021028 ENSHGLG00000047012 TRAM1 (ENSHGLG00000008235) ENSHGLG00000006207 XKR9 (ENSHGLG00000033679) ENSHGLG00000018393 #22 EYA1 (ENSHGLG00000019347) ENSHGLG00000038455 MSC (ENSHGLG00000040745) TRPA1 (ENSHGLG00000017879) KCNB2 (ENSHGLG00000017013) ENSHGLG00000021368 Terf1 (ENSHGLG00000013062) SBSPON (ENSHGLG00000044318) RPL7 (ENSHGLG00000017000) RDH10 (ENSHGLG00000013673) STAU2 (ENSHGLG00000014888) UBE2W (ENSHGLG00000016745) TCEB1 (ENSHGLG00000042986) TMEM70 (ENSHGLG00000042950) LY96 (ENSHGLG00000017254) Sciuridae ANCESTRAL SPECIES 9 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.ib #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.e.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 ENSGT00940000153104.e.b.b Eurasian red squirrel MODERN SPECIES 9 TECPR1 (ENSSVLG00005020896) #7 ENSSVLG00005020936 BRI3 (ENSSVLG00005020971) #8 BAIAP2L1 (ENSSVLG00005021009) #9 NPTX2 (ENSSVLG00005021028) #10 TMEM130 (ENSSVLG00005021101) #11 TRRAP (ENSSVLG00005021317) #12 SMURF1 (ENSSVLG00005021442) #13 KPNA7 (ENSSVLG00005021513) #14 ENSSVLG00005021650 #15 ENSSVLG00005021905 #16 ARPC1B (ENSSVLG00005021982) #17 ENSSVLG00005022058 #19 BUD31 (ENSSVLG00005022102) #20 PTCD1 (ENSSVLG00005022169) #21 CPSF4 (ENSSVLG00005022210) #22 ENSSVLG00005022299 #23 ENSSVLG00005022403 ZNF789 (ENSSVLG00005022423) #25 ZNF394 (ENSSVLG00005022501) #24 ZKSCAN5 (ENSSVLG00005022583) #26 ZNF655 (ENSSVLG00005022626) #28 TMEM225B (ENSSVLG00005022717) #29 ZSCAN25 (ENSSVLG00005022756) #30 ENSSVLG00005022805 ##31 ENSSVLG00005023015 ##31 OR2AE1 (ENSSVLG00005023354) GJC3 (ENSSVLG00005023365) AZGP1 (ENSSVLG00005023385) ZKSCAN1 (ENSSVLG00005023421) ZSCAN21 (ENSSVLG00005023456) Marmotini ANCESTRAL SPECIES 85 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.ib #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.e.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b.b.b.b.a.b.a ##31 Alpin marmot MODERN SPECIES 77 ENSMMMG00000006285 BRI3 (ENSMMMG00000006279) #8 BAIAP2L1 (ENSMMMG00000006242) #9 NPTX2 (ENSMMMG00000006236) #10 TMEM130 (ENSMMMG00000006225) #11 TRRAP (ENSMMMG00000005650) #12 SMURF1 (ENSMMMG00000005602) #13 KPNA7 (ENSMMMG00000005564) #14 ENSMMMG00000005492 #15 ARPC1A (ENSMMMG00000005477) #16 ARPC1B (ENSMMMG00000005459) #17 PDAP1 (ENSMMMG00000005448) #19 BUD31 (ENSMMMG00000005402) #20 PTCD1 (ENSMMMG00000005393) #21 ENSMMMG00000005390 CPSF4 (ENSMMMG00000005304) #22 ENSMMMG00000005266 #23 ZNF394 (ENSMMMG00000005254) #24 ZKSCAN5 (ENSMMMG00000005213) #26 ZNF655 (ENSMMMG00000005178) #28 TMEM225B (ENSMMMG00000005168) #29 ZSCAN25 (ENSMMMG00000005159) #30 ENSMMMG00000005149 ##31 ENSMMMG00000005108 ##31 ENSMMMG00000005062 ##31 Marmotini_b ANCESTRAL SPECIES 131 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.ib #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.e.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b.b.b.b.a.b.a ##31 Squirrel MODERN SPECIES 350 LMTK2 (ENSSTOG00000009706) BHLHA15 (ENSSTOG00000009728) TECPR1 (ENSSTOG00000009733) #7 BRI3 (ENSSTOG00000021622) #8 BAIAP2L1 (ENSSTOG00000020782) #9 NPTX2 (ENSSTOG00000003631) #10 TMEM130 (ENSSTOG00000010723) #11 TRRAP (ENSSTOG00000028392) #12 SMURF1 (ENSSTOG00000015427) #13 KPNA7 (ENSSTOG00000032733) #14 ARPC1A (ENSSTOG00000001660) #16 ARPC1B (ENSSTOG00000001668) #17 PDAP1 (ENSSTOG00000001679) #19 BUD31 (ENSSTOG00000023828) #20 PTCD1 (ENSSTOG00000001682) #21 CPSF4 (ENSSTOG00000001688) #22 ATP5MF (ENSSTOG00000023928) #23 ENSSTOG00000034172 ZNF394 (ENSSTOG00000032054) #24 ZKSCAN5 (ENSSTOG00000019879) #26 ZNF655 (ENSSTOG00000008206) #28 ZSCAN25 (ENSSTOG00000008185) #30 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 300 TECPR1 (ENSUPAG00010006865) #7 BRI3 (ENSUPAG00010006894) #8 BAIAP2L1 (ENSUPAG00010006906) #9 NPTX2 (ENSUPAG00010006944) #10 TMEM130 (ENSUPAG00010006958) #11 TRRAP (ENSUPAG00010006983) #12 ENSUPAG00010007610 SMURF1 (ENSUPAG00010007614) #13 KPNA7 (ENSUPAG00010007717) #14 ENSUPAG00010007740 #15 ARPC1A (ENSUPAG00010007778) #16 ARPC1B (ENSUPAG00010007793) #17 PDAP1 (ENSUPAG00010007814) #19 BUD31 (ENSUPAG00010007837) #20 PTCD1 (ENSUPAG00010007850) #21 CPSF4 (ENSUPAG00010007865) #22 ENSUPAG00010007991 ENSUPAG00010007996 #23 ENSUPAG00010008010 #24 ENSUPAG00010008013 #24 ZKSCAN5 (ENSUPAG00010008019) #26 ZNF655 (ENSUPAG00010008051) #28 TMEM225B (ENSUPAG00010008085) #29 ZSCAN25 (ENSUPAG00010008096) #30 ENSUPAG00010008106 ##31 ENSUPAG00010008122 ##31 ENSUPAG00010008173 ##31 ENSUPAG00010008186 Arctic ground squirrel MODERN SPECIES 111 P2RY1 (ENSUPAG00010006704) RAP2B (ENSUPAG00010006710) ARHGEF26 (ENSUPAG00010006714) DHX36 (ENSUPAG00010006741) GPR149 (ENSUPAG00010006785) MME (ENSUPAG00010006795) ENSUPAG00010006817 PLCH1 (ENSUPAG00010006835) ENSUPAG00010007178 C3orf33 (ENSUPAG00010007194) SLC33A1 (ENSUPAG00010007214) GMPS (ENSUPAG00010007230) ENSUPAG00010007272 KCNAB1 (ENSUPAG00010007381) SSR3 (ENSUPAG00010007397) ENSUPAG00010007423 #22 TIPARP (ENSUPAG00010007433) ENSUPAG00010007447 LEKR1 (ENSUPAG00010007452) CCNL1 (ENSUPAG00010007457) VEPH1 (ENSUPAG00010007462) PTX3 (ENSUPAG00010007477) SHOX2 (ENSUPAG00010007482) RSRC1 (ENSUPAG00010007492) MLF1 (ENSUPAG00010007820) GFM1 (ENSUPAG00010007852) LXN (ENSUPAG00010007947) RARRES1 (ENSUPAG00010007963) MFSD1 (ENSUPAG00010007976) ENSUPAG00010007997 Rodentia_B ANCESTRAL SPECIES 29 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.b ##31 ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607.d ENSGT00950000182890.D.c.a.b ENSGT00940000153104.e.b.b Kangaroo rat MODERN SPECIES 387 Lmtk2 (ENSDORG00000003934) Bhlha15 (ENSDORG00000026874) Tecpr1 (ENSDORG00000003936) #7 ENSDORG00000027487 Baiap2l1 (ENSDORG00000007704) #9 Nptx2 (ENSDORG00000002048) #10 Tmem130 (ENSDORG00000008927) #11 Trrap (ENSDORG00000016733) #12 Smurf1 (ENSDORG00000001289) #13 Kpna7 (ENSDORG00000001481) #14 ENSDORG00000016059 #16 Arpc1b (ENSDORG00000000737) #17 Pdap1 (ENSDORG00000000738) #19 ENSDORG00000000739 #20 Ptcd1 (ENSDORG00000000740) #21 Cpsf4 (ENSDORG00000000742) #22 Atp5j2 (ENSDORG00000000743) #23 Zkscan14 (ENSDORG00000006843) #24 ENSDORG00000027431 ENSDORG00000029957 Zscan25 (ENSDORG00000024526) #30 ENSDORG00000030120 ENSDORG00000012448 ##31 ENSDORG00000027377 ##31 Gjc3 (ENSDORG00000004757) Zkscan1 (ENSDORG00000025152) Zscan21 (ENSDORG00000009833) Zfp113 (ENSDORG00000000945) Cops6 (ENSDORG00000024208) ENSDORG00000000946 Ap4m1 (ENSDORG00000019826) Myomorpha ANCESTRAL SPECIES 31 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00950000182958.a.b.b.j.a.b ##31 ENSGT01090000260018.B.b ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607.d ENSGT00950000182890.D.c.a.b ENSGT00940000153104.e.b.b ENSGT00950000183073.a.a.b Muroidea ANCESTRAL SPECIES 51 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 Muroidea_A ANCESTRAL SPECIES 27 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.d ENSGT00940000161208 ENSGT00940000155647 Cricetidae ANCESTRAL SPECIES 27 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00940000158530.j.a ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.d ENSGT00940000161208 ENSGT00940000155647 Cricetidae_B ANCESTRAL SPECIES 46 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 Northern American deer mouse MODERN SPECIES 15 Bhlha15 (ENSPEMG00000009777) Tecpr1 (ENSPEMG00000002374) #7 Bri3 (ENSPEMG00000009259) #8 Baiap2l1 (ENSPEMG00000016921) #9 Nptx2 (ENSPEMG00000004530) #10 ENSPEMG00000030777 Tmem130 (ENSPEMG00000017312) #11 Trrap (ENSPEMG00000007905) #12 Smurf1 (ENSPEMG00000004784) #13 Kpna7 (ENSPEMG00000017218) #14 Arpc1a (ENSPEMG00000013996) #16 Arpc1b (ENSPEMG00000017147) #17 ENSPEMG00000015747 #19 Bud31 (ENSPEMG00000010947) #20 Ptcd1 (ENSPEMG00000013736) #21 Cpsf4 (ENSPEMG00000004508) #22 Atp5j2 (ENSPEMG00000013672) #23 Zkscan14 (ENSPEMG00000011797) #24 Zkscan5 (ENSPEMG00000010963) #26 ENSPEMG00000011222 ENSPEMG00000030363 ENSPEMG00000029204 ##31 ENSPEMG00000031372 ENSPEMG00000026224 ##31 Rxfp2 (ENSPEMG00000018554) B3glct (ENSPEMG00000015898) ENSPEMG00000025164 Hsph1 (ENSPEMG00000009941) Wdr95 (ENSPEMG00000016428) Tex26 (ENSPEMG00000019024) Medag (ENSPEMG00000000331) Prairie vole MODERN SPECIES 110 Bud31 (ENSMOCG00000017115) #20 ENSMOCG00000016192 Cpsf4 (ENSMOCG00000014901) #22 Atp5j2 (ENSMOCG00000003786) #23 Zkscan5 (ENSMOCG00000011909) #26 Zfp655 (ENSMOCG00000019962) #28 Pdap1 (ENSMOCG00000015800) #19 Arpc1b (ENSMOCG00000010471) #17 Arpc1a (ENSMOCG00000020844) #16 Kpna7 (ENSMOCG00000012853) #14 Smurf1 (ENSMOCG00000010176) #13 Trrap (ENSMOCG00000000272) #12 Tmem130 (ENSMOCG00000015764) #11 Nptx2 (ENSMOCG00000011501) #10 Baiap2l1 (ENSMOCG00000002763) #9 Bri3 (ENSMOCG00000007653) #8 Tecpr1 (ENSMOCG00000021771) #7 Lmtk2 (ENSMOCG00000019505) Cricetinae ANCESTRAL SPECIES 19 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00950000182958.a.b.b.j.a.a.a.b.b ##31 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.b.a ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00940000158530.j.a ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.d ENSGT00940000161208 Chinese hamster chok1gshd MODERN SPECIES 130 Tecpr1 (ENSCGRG00001010075) #7 Bri3 (ENSCGRG00001003030) #8 Baiap2l1 (ENSCGRG00001018597) #9 ENSCGRG00001012810 Nptx2 (ENSCGRG00001001038) #10 Tmem130 (ENSCGRG00001017171) #11 ENSCGRG00001014941 Trrap (ENSCGRG00001015326) #12 Smurf1 (ENSCGRG00001020132) #13 Kpna7 (ENSCGRG00001007501) #14 ENSCGRG00001021831 #16 ENSCGRG00001021035 #17 Pdap1 (ENSCGRG00001016829) #19 Bud31 (ENSCGRG00001012044) #20 Ptcd1 (ENSCGRG00001023686) #21 Cpsf4 (ENSCGRG00001024184) #22 Atp5j2 (ENSCGRG00001016065) #23 Zkscan14 (ENSCGRG00001014948) #24 Zkscan5 (ENSCGRG00001021752) #26 Zfp655 (ENSCGRG00001016484) #28 ENSCGRG00001019977 ##31 Zscan25 (ENSCGRG00001017680) #30 ENSCGRG00001010181 ##31 ENSCGRG00001023511 ##31 ENSCGRG00001020483 Rnf6 (ENSCGRG00001010459) Cdk8 (ENSCGRG00001010747) Wasf3 (ENSCGRG00001003303) Gpr12 (ENSCGRG00001003285) ENSCGRG00001021742 Rpl21 (ENSCGRG00001007602) Golden Hamster MODERN SPECIES 712 Lmtk2 (ENSMAUG00000014353) Tecpr1 (ENSMAUG00000008072) #7 Bri3 (ENSMAUG00000000701) #8 Baiap2l1 (ENSMAUG00000008280) #9 Nptx2 (ENSMAUG00000017629) #10 ENSMAUG00000000660 Tmem130 (ENSMAUG00000020273) #11 Trrap (ENSMAUG00000015855) #12 Smurf1 (ENSMAUG00000000511) #13 Kpna7 (ENSMAUG00000019165) #14 ENSMAUG00000014235 #16 ENSMAUG00000003299 #17 Pdap1 (ENSMAUG00000011742) #19 Bud31 (ENSMAUG00000016405) #20 ENSMAUG00000011008 Cpsf4 (ENSMAUG00000021253) #22 Atp5j2 (ENSMAUG00000018419) #23 Zkscan5 (ENSMAUG00000014532) #26 Zscan25 (ENSMAUG00000012364) #30 ENSMAUG00000013270 ##31 ENSMAUG00000011782 ##31 Rnf6 (ENSMAUG00000014438) ENSMAUG00000013390 Wasf3 (ENSMAUG00000004464) Murinae ANCESTRAL SPECIES 28 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a ##31 ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000161208 ENSGT00940000155647 Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 3 Tecpr1 (ENSRNOG00000001010) #7 Bri3 (ENSRNOG00000001009) #8 Baiap2l1 (ENSRNOG00000001007) #9 RGD1565131 (ENSRNOG00000025212) LOC100360200 (ENSRNOG00000025217) #22 Nptx2 (ENSRNOG00000001006) #10 Tmem130 (ENSRNOG00000025235) #11 Trrap (ENSRNOG00000025244) #12 Smurf1 (ENSRNOG00000000999) #13 Kpna7 (ENSRNOG00000042296) #14 Arpc1a (ENSRNOG00000000996) #16 Arpc1b (ENSRNOG00000000991) #17 Pdap1 (ENSRNOG00000000990) #19 Bud31 (ENSRNOG00000000989) #20 Ptcd1 (ENSRNOG00000000987) #21 Cpsf4 (ENSRNOG00000000985) #22 Atp5mf (ENSRNOG00000027049) #23 Zfp394 (ENSRNOG00000000983) #24 Zkscan5 (ENSRNOG00000059552) #26 Zfp655 (ENSRNOG00000060129) #28 Zscan25 (ENSRNOG00000042213) #30 Cyp3a23-3a1 (ENSRNOG00000067532) ##31 ENSRNOG00000062654 ##31 ENSRNOG00000063231 ##31 Cyp3a23-3a1 (ENSRNOG00000062027) ##31 Cyp3a2 (ENSRNOG00000032560) ##31 Cyp3a73 (ENSRNOG00000047745) ##31 Cyp3a73 (ENSRNOG00000000978) ##31 Cyp3a18 (ENSRNOG00000000969) ##31 Rnf6 (ENSRNOG00000000968) AABR07035338.1 (ENSRNOG00000039819) Rat MODERN SPECIES 3 Zfp655 (ENSRNOG00000060129) #28 Zkscan5 (ENSRNOG00000059552) #26 Zfp394 (ENSRNOG00000000983) #24 Atp5mf (ENSRNOG00000027049) #23 Cpsf4 (ENSRNOG00000000985) #22 Ptcd1 (ENSRNOG00000000987) #21 Bud31 (ENSRNOG00000000989) #20 Pdap1 (ENSRNOG00000000990) #19 Arpc1b (ENSRNOG00000000991) #17 Arpc1a (ENSRNOG00000000996) #16 Kpna7 (ENSRNOG00000042296) #14 Smurf1 (ENSRNOG00000000999) #13 Trrap (ENSRNOG00000025244) #12 Tmem130 (ENSRNOG00000025235) #11 Nptx2 (ENSRNOG00000001006) #10 LOC100360200 (ENSRNOG00000025217) #22 RGD1565131 (ENSRNOG00000025212) Baiap2l1 (ENSRNOG00000001007) #9 Bri3 (ENSRNOG00000001009) #8 Tecpr1 (ENSRNOG00000001010) #7 Bhlha15 (ENSRNOG00000025164) Lmtk2 (ENSRNOG00000025155) Ocm (ENSRNOG00000001031) Ccz1b (ENSRNOG00000001032) Rsph10b (ENSRNOG00000001036) Pms2 (ENSRNOG00000001040) Aimp2 (ENSRNOG00000001044) Eif2ak1 (ENSRNOG00000001050) Ankrd61 (ENSRNOG00000001048) Usp42 (ENSRNOG00000001059) Cyth3 (ENSRNOG00000001065) Rat MODERN SPECIES 46 Plp2 (ENSRNOG00000039496) Prickle3 (ENSRNOG00000022417) Syp (ENSRNOG00000059720) Cacna1f (ENSRNOG00000010348) Ccdc22 (ENSRNOG00000010846) Foxp3 (ENSRNOG00000011702) Ppp1r3f (ENSRNOG00000068767) ENSRNOG00000066758 ENSRNOG00000065488 AABR07037203.1 (ENSRNOG00000028611) Usp27x (ENSRNOG00000002844) Clcn5 (ENSRNOG00000002862) Akap4 (ENSRNOG00000002921) Ccnb3 (ENSRNOG00000002951) Dgkk (ENSRNOG00000039323) Cpsf4-ps1 (ENSRNOG00000062241) #22 Shroom4 (ENSRNOG00000002959) AABR07037243.1 (ENSRNOG00000002975) Bmp15 (ENSRNOG00000002984) Nudt11 (ENSRNOG00000046053) Ezhip (ENSRNOG00000039305) Smptb (ENSRNOG00000028033) Smptb (ENSRNOG00000066859) ENSRNOG00000067767 LOC120099275 (ENSRNOG00000030417) LOC302576 (ENSRNOG00000066885) Mycs (ENSRNOG00000003085) ENSRNOG00000063942 ENSRNOG00000069398 RGD1565862 (ENSRNOG00000068201) Spin2b (ENSRNOG00000062360) Mus ANCESTRAL SPECIES 17 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a.d ##31 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a.c ##31 ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.c.c.b Mus_A ANCESTRAL SPECIES 6 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000156012.q ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b.w #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a.d ##31 ENSGT00950000182958.a.b.b.j.a.a.a.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a.c ##31 ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.c.c.b Mus_B ANCESTRAL SPECIES 4 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000156012.q ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b.w #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.a.a.a.a.d ##31 ENSGT00950000182958.a.b.b.j.a.a.a.b.j ##31 ENSGT00950000182958.a.b.b.j.a.a.a.b.i.b ##31 ENSGT00950000182958.a.b.b.j.a.a.a.a.c.a.a ##31 ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.c.c.b Mouse MODERN SPECIES 14 Tecpr1 (ENSMUSG00000066621) #7 Bri3 (ENSMUSG00000047843) #8 Baiap2l1 (ENSMUSG00000038859) #9 Nptx2 (ENSMUSG00000059991) #10 Tmem130 (ENSMUSG00000043388) #11 Trrap (ENSMUSG00000045482) #12 Smurf1 (ENSMUSG00000038780) #13 Kpna7 (ENSMUSG00000038770) #14 Gm4871 (ENSMUSG00000061707) 1700018F24Rik (ENSMUSG00000029620) Arpc1a (ENSMUSG00000029621) #16 Arpc1b (ENSMUSG00000029622) #17 Pdap1 (ENSMUSG00000029623) #19 Bud31 (ENSMUSG00000038722) #20 Ptcd1 (ENSMUSG00000029624) #21 Cpsf4 (ENSMUSG00000029625) #22 Atp5j2 (ENSMUSG00000038690) #23 Zkscan14 (ENSMUSG00000029627) #24 Zkscan5 (ENSMUSG00000055991) #26 Zfp655 (ENSMUSG00000007812) #28 Zscan25 (ENSMUSG00000070420) #30 Cyp3a57 (ENSMUSG00000070419) ##31 Cyp3a16 (ENSMUSG00000038656) ##31 Cyp3a41b (ENSMUSG00000075552) ##31 Cyp3a41a (ENSMUSG00000075551) ##31 Cyp3a44 (ENSMUSG00000054417) ##31 Cyp3a11 (ENSMUSG00000056035) ##31 Cyp3a25 (ENSMUSG00000029630) ##31 Cyp3a59 (ENSMUSG00000061292) ##31 Gm5565 (ENSMUSG00000104752) Gm6309 (ENSMUSG00000096798) Mus_C ANCESTRAL SPECIES 4 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000156012.q ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b.w #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.c #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00940000155423.e.b ENSGT00940000158530.j ENSGT00940000157104 ENSGT00950000182962.a.a ENSGT01060000248564.b.a.b.a ENSGT00940000153284.a.h ENSGT00950000182922.a.a.b.c.c.b ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 spretus MODERN SPECIES 14 Lmtk2 (MGP_SPRETEiJ_G0028998) Bhlha15 (MGP_SPRETEiJ_G0028999) Tecpr1 (MGP_SPRETEiJ_G0029000) #7 Bri3 (MGP_SPRETEiJ_G0029001) #8 Baiap2l1 (MGP_SPRETEiJ_G0029002) #9 Nptx2 (MGP_SPRETEiJ_G0029003) #10 Tmem130 (MGP_SPRETEiJ_G0029004) #11 Trrap (MGP_SPRETEiJ_G0029005) #12 Smurf1 (MGP_SPRETEiJ_G0029006) #13 Kpna7 (MGP_SPRETEiJ_G0029007) #14 Arpc1a (MGP_SPRETEiJ_G0029008) #16 MGP_SPRETEiJ_G0029009 #17 Pdap1 (MGP_SPRETEiJ_G0029010) #19 Bud31 (MGP_SPRETEiJ_G0029011) #20 Ptcd1 (MGP_SPRETEiJ_G0029012) #21 Cpsf4 (MGP_SPRETEiJ_G0029013) #22 Atp5j2 (MGP_SPRETEiJ_G0029014) #23 Zkscan14 (MGP_SPRETEiJ_G0029015) #24 Zkscan5 (MGP_SPRETEiJ_G0029016) #26 Zfp655 (MGP_SPRETEiJ_G0029017) #28 Zscan25 (MGP_SPRETEiJ_G0029018) #30 MGP_SPRETEiJ_G0029019 ##31 MGP_SPRETEiJ_G0029020 ##31 MGP_SPRETEiJ_G0029021 ##31 Rnf6 (MGP_SPRETEiJ_G0029022) Cdk8 (MGP_SPRETEiJ_G0029023) Wasf3 (MGP_SPRETEiJ_G0029024) Gpr12 (MGP_SPRETEiJ_G0029025) Usp12 (MGP_SPRETEiJ_G0029026) MGP_SPRETEiJ_G0029027 Rasl11a (MGP_SPRETEiJ_G0029028) Steppe mouse MODERN SPECIES 3370 ENSMSIG00000029259 Baiap2l1 (ENSMSIG00000029242) #9 ENSMSIG00000029239 Nptx2 (ENSMSIG00000029233) #10 Tmem130 (ENSMSIG00000029228) #11 Trrap (ENSMSIG00000029078) #12 Smurf1 (ENSMSIG00000029028) #13 ENSMSIG00000029026 #14 ENSMSIG00000029019 Arpc1a (ENSMSIG00000029008) #16 ENSMSIG00000029006 Arpc1b (ENSMSIG00000028992) #17 Pdap1 (ENSMSIG00000028982) #19 Bud31 (ENSMSIG00000028973) #20 Ptcd1 (ENSMSIG00000028962) #21 Cpsf4 (ENSMSIG00000028934) #22 Atp5j2 (ENSMSIG00000028928) #23 ENSMSIG00000028921 #24 Zkscan5 (ENSMSIG00000028906) #26 Zscan25 (ENSMSIG00000028875) #30 Ryukyu mouse MODERN SPECIES 14 Tecpr1 (MGP_CAROLIEiJ_G0027997) #7 Bri3 (MGP_CAROLIEiJ_G0027998) #8 Baiap2l1 (MGP_CAROLIEiJ_G0027999) #9 Nptx2 (MGP_CAROLIEiJ_G0028000) #10 Tmem130 (MGP_CAROLIEiJ_G0028001) #11 Trrap (MGP_CAROLIEiJ_G0028002) #12 Smurf1 (MGP_CAROLIEiJ_G0028003) #13 Kpna7 (MGP_CAROLIEiJ_G0028004) #14 MGP_CAROLIEiJ_G0028005 MGP_CAROLIEiJ_G0028006 Arpc1a (MGP_CAROLIEiJ_G0028007) #16 Arpc1b (MGP_CAROLIEiJ_G0028008) #17 Pdap1 (MGP_CAROLIEiJ_G0028009) #19 Bud31 (MGP_CAROLIEiJ_G0028010) #20 Ptcd1 (MGP_CAROLIEiJ_G0028011) #21 Cpsf4 (MGP_CAROLIEiJ_G0028012) #22 Atp5j2 (MGP_CAROLIEiJ_G0028013) #23 Zkscan14 (MGP_CAROLIEiJ_G0028014) #24 Zkscan5 (MGP_CAROLIEiJ_G0028015) #26 Zfp655 (MGP_CAROLIEiJ_G0028016) #28 MGP_CAROLIEiJ_G0028017 #30 MGP_CAROLIEiJ_G0028018 ##31 MGP_CAROLIEiJ_G0028020 MGP_CAROLIEiJ_G0028022 MGP_CAROLIEiJ_G0028021 MGP_CAROLIEiJ_G0028023 Rnf6 (MGP_CAROLIEiJ_G0028024) Cdk8 (MGP_CAROLIEiJ_G0028025) Wasf3 (MGP_CAROLIEiJ_G0028026) Gpr12 (MGP_CAROLIEiJ_G0028027) Usp12 (MGP_CAROLIEiJ_G0028028) Shrew mouse MODERN SPECIES 15 Lmtk2 (MGP_PahariEiJ_G0024566) Bhlha15 (MGP_PahariEiJ_G0024567) Tecpr1 (MGP_PahariEiJ_G0024568) #7 Bri3 (MGP_PahariEiJ_G0024569) #8 Baiap2l1 (MGP_PahariEiJ_G0024570) #9 Nptx2 (MGP_PahariEiJ_G0024571) #10 Tmem130 (MGP_PahariEiJ_G0024572) #11 Trrap (MGP_PahariEiJ_G0024573) #12 Smurf1 (MGP_PahariEiJ_G0024574) #13 Kpna7 (MGP_PahariEiJ_G0024575) #14 MGP_PahariEiJ_G0024576 #16 Arpc1b (MGP_PahariEiJ_G0024577) #17 Pdap1 (MGP_PahariEiJ_G0024578) #19 Bud31 (MGP_PahariEiJ_G0024579) #20 Ptcd1 (MGP_PahariEiJ_G0024580) #21 Cpsf4 (MGP_PahariEiJ_G0024581) #22 Atp5j2 (MGP_PahariEiJ_G0024582) #23 Zkscan14 (MGP_PahariEiJ_G0024583) #24 Zkscan5 (MGP_PahariEiJ_G0024584) #26 Zfp655 (MGP_PahariEiJ_G0024585) #28 Zscan25 (MGP_PahariEiJ_G0024586) #30 MGP_PahariEiJ_G0024587 ##31 MGP_PahariEiJ_G0024589 ##31 MGP_PahariEiJ_G0024588 ##31 Rnf6 (MGP_PahariEiJ_G0024590) Cdk8 (MGP_PahariEiJ_G0024591) Wasf3 (MGP_PahariEiJ_G0024592) Gpr12 (MGP_PahariEiJ_G0024593) Usp12 (MGP_PahariEiJ_G0024594) MGP_PahariEiJ_G0024595 Rasl11a (MGP_PahariEiJ_G0024596) Upper Galilee mountains blind mole rat MODERN SPECIES 1850 Bhlha15 (ENSNGAG00000011836) Tecpr1 (ENSNGAG00000013589) #7 Bri3 (ENSNGAG00000013902) #8 Baiap2l1 (ENSNGAG00000018325) #9 ENSNGAG00000014139 Nptx2 (ENSNGAG00000013356) #10 Tmem130 (ENSNGAG00000017786) #11 Trrap (ENSNGAG00000022892) #12 Smurf1 (ENSNGAG00000008962) #13 Kpna7 (ENSNGAG00000021193) #14 ENSNGAG00000018383 #16 Arpc1b (ENSNGAG00000015329) #17 Pdap1 (ENSNGAG00000017370) #19 ENSNGAG00000002694 #20 ENSNGAG00000015871 Cpsf4 (ENSNGAG00000001567) #22 ENSNGAG00000018916 #23 Zkscan14 (ENSNGAG00000023424) #24 ENSNGAG00000023612 Zkscan5 (ENSNGAG00000017855) #26 Zfp655 (ENSNGAG00000008217) #28 Zscan25 (ENSNGAG00000021657) #30 ENSNGAG00000010294 ##31 ENSNGAG00000000778 ##31 Lesser Egyptian jerboa MODERN SPECIES 250 Eif3b (ENSJJAG00000014658) Trrap (ENSJJAG00000015572) #12 Smurf1 (ENSJJAG00000011991) #13 Kpna7 (ENSJJAG00000010612) #14 ENSJJAG00000011076 #16 Arpc1b (ENSJJAG00000010687) #17 ENSJJAG00000008855 #19 Bud31 (ENSJJAG00000007925) #20 Ptcd1 (ENSJJAG00000000319) #21 Cpsf4 (ENSJJAG00000019426) #22 Atp5j2 (ENSJJAG00000018319) #23 Zkscan14 (ENSJJAG00000017218) #24 Zkscan5 (ENSJJAG00000017033) #26 Laurasiatheria ANCESTRAL SPECIES 10 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Eulipotyphla ANCESTRAL SPECIES 296 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 Hedgehog MODERN SPECIES 964 BUD31 (ENSEEUG00000002070) #20 PTCD1 (ENSEEUG00000002116) #21 CPSF4 (ENSEEUG00000002158) #22 ENSEEUG00000002166 #23 Common shrew MODERN SPECIES 566 CPSF4 (ENSSARG00000012416) #22 FAM200A (ENSSARG00000012417) #27 Laurasiatheria_a ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Laurasiatheria_b ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00940000154740.a.a.c.b ENSGT00940000165768 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j ##31 ENSGT01090000260018.B.b Carnivora ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a ##31 ENSGT00950000182958.a.b.b.j.i.b ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Felidae ANCESTRAL SPECIES 19 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a.g ##31 ENSGT00950000182958.a.b.b.j.i.a.h ##31 ENSGT00950000182958.a.b.b.j.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Panthera ANCESTRAL SPECIES 27 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a.c #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a.g ##31 ENSGT00950000182958.a.b.b.j.i.a.h ##31 ENSGT00950000182958.a.b.b.j.j ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Panthera_a ANCESTRAL SPECIES 27 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a.c #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000183014.f.a.h.p ENSGT00930000152728.c ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a.g ##31 ENSGT00950000182958.a.b.b.j.i.a.h ##31 ENSGT00950000182958.a.b.b.j.j ##31 ENSGT01090000260018.B.b lion MODERN SPECIES 16 TECPR1 (ENSPLOG00000012232) #7 BRI3 (ENSPLOG00000012123) #8 BAIAP2L1 (ENSPLOG00000011965) #9 ENSPLOG00000011906 NPTX2 (ENSPLOG00000011785) #10 TMEM130 (ENSPLOG00000011537) #11 TRRAP (ENSPLOG00000022523) #12 SMURF1 (ENSPLOG00000022456) #13 KPNA7 (ENSPLOG00000022405) #14 ENSPLOG00000022335 #15 ARPC1A (ENSPLOG00000022304) #16 ARPC1B (ENSPLOG00000022242) #17 PDAP1 (ENSPLOG00000022211) #19 BUD31 (ENSPLOG00000022188) #20 PTCD1 (ENSPLOG00000022137) #21 CPSF4 (ENSPLOG00000022084) #22 ENSPLOG00000022043 #23 ZNF789 (ENSPLOG00000022019) #25 ZNF394 (ENSPLOG00000022000) #24 ZKSCAN5 (ENSPLOG00000021985) #26 FAM200A (ENSPLOG00000021967) #27 ZNF655 (ENSPLOG00000021930) #28 ENSPLOG00000021878 #29 ZSCAN25 (ENSPLOG00000021838) #30 ENSPLOG00000021805 ENSPLOG00000021785 CYP3A131 (ENSPLOG00000021657) ##31 ENSPLOG00000021498 ##31 ENSPLOG00000021444 ##31 OR2AE1 (ENSPLOG00000021431) TRIM4 (ENSPLOG00000021398) #37 leopard MODERN SPECIES 91 BRI3 (ENSPPRG00000022966) #8 BAIAP2L1 (ENSPPRG00000023080) #9 ENSPPRG00000023746 NPTX2 (ENSPPRG00000024054) #10 TMEM130 (ENSPPRG00000024166) #11 TRRAP (ENSPPRG00000024644) #12 ENSPPRG00000003908 SMURF1 (ENSPPRG00000013759) #13 KPNA7 (ENSPPRG00000011372) #14 ENSPPRG00000010473 #15 ARPC1A (ENSPPRG00000008068) #16 ARPC1B (ENSPPRG00000007519) #17 PDAP1 (ENSPPRG00000007263) #19 BUD31 (ENSPPRG00000004354) #20 PTCD1 (ENSPPRG00000003478) #21 CPSF4 (ENSPPRG00000003134) #22 ENSPPRG00000001557 #23 ZNF789 (ENSPPRG00000001332) #25 ZNF394 (ENSPPRG00000000948) #24 ZKSCAN5 (ENSPPRG00000000685) #26 FAM200A (ENSPPRG00000020418) #27 ZNF655 (ENSPPRG00000023556) #28 TMEM225B (ENSPPRG00000021822) #29 ZSCAN25 (ENSPPRG00000020661) #30 ENSPPRG00000018011 ENSPPRG00000020127 ENSPPRG00000020116 CYP3A131 (ENSPPRG00000014793) ##31 CYP3A132 (ENSPPRG00000013886) ##31 ENSPPRG00000010396 ##31 OR2AE1 (ENSPPRG00000019851) Tiger MODERN SPECIES 155 ENSPTIG00000009441 LMTK2 (ENSPTIG00000008096) TECPR1 (ENSPTIG00000005029) #7 BAIAP2L1 (ENSPTIG00000020036) #9 NPTX2 (ENSPTIG00000019675) #10 TMEM130 (ENSPTIG00000017143) #11 ENSPTIG00000016839 SMURF1 (ENSPTIG00000019948) #13 KPNA7 (ENSPTIG00000019265) #14 ENSPTIG00000015791 #15 ARPC1A (ENSPTIG00000015204) #16 ARPC1B (ENSPTIG00000014065) #17 PDAP1 (ENSPTIG00000012964) #19 BUD31 (ENSPTIG00000011324) #20 PTCD1 (ENSPTIG00000010617) #21 CPSF4 (ENSPTIG00000005604) #22 ENSPTIG00000004326 #23 ZNF789 (ENSPTIG00000001790) #25 ZNF394 (ENSPTIG00000020093) #24 ZKSCAN5 (ENSPTIG00000018483) #26 FAM200A (ENSPTIG00000006096) #27 ZNF655 (ENSPTIG00000015445) #28 TMEM225B (ENSPTIG00000013612) #29 ZSCAN25 (ENSPTIG00000012424) #30 ENSPTIG00000005985 ENSPTIG00000011815 CYP3A131 (ENSPTIG00000011625) ##31 CYP3A132 (ENSPTIG00000009616) ##31 ENSPTIG00000008461 ##31 Cat MODERN SPECIES 247 OCM (ENSFCAG00000000313) LMTK2 (ENSFCAG00000030546) TECPR1 (ENSFCAG00000000316) #7 BRI3 (ENSFCAG00000045373) #8 BAIAP2L1 (ENSFCAG00000000317) #9 NPTX2 (ENSFCAG00000004394) #10 TMEM130 (ENSFCAG00000036518) #11 TRRAP (ENSFCAG00000015061) #12 SMURF1 (ENSFCAG00000015062) #13 KPNA7 (ENSFCAG00000015063) #14 MYH16 (ENSFCAG00000015064) #15 ARPC1A (ENSFCAG00000015065) #16 PDAP1 (ENSFCAG00000015067) #19 BUD31 (ENSFCAG00000027449) #20 PTCD1 (ENSFCAG00000015069) #21 CPSF4 (ENSFCAG00000015070) #22 ENSFCAG00000037096 #23 ZNF789 (ENSFCAG00000015072) #25 ZNF394 (ENSFCAG00000031324) #24 ZKSCAN5 (ENSFCAG00000026733) #26 ZNF655 (ENSFCAG00000024492) #28 TMEM225B (ENSFCAG00000024064) #29 ZSCAN25 (ENSFCAG00000006593) #30 ENSFCAG00000025929 CYP3A131 (ENSFCAG00000046713) ##31 CYP3A132 (ENSFCAG00000040455) ##31 ENSFCAG00000023135 ##31 TRIM4 (ENSFCAG00000025749) #37 GJC3 (ENSFCAG00000015012) ZKSCAN1 (ENSFCAG00000042679) ZSCAN21 (ENSFCAG00000029089) Caniformia ANCESTRAL SPECIES 8 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT00390000006548.b.k.j.b ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a #23 ENSGT00510000046986.w #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a ##31 ENSGT00950000182958.a.b.b.j.i.b.a ##31 ENSGT00950000182958.a.b.b.j.i.b.b ##31 ENSGT01090000260018.B.b Canidae ANCESTRAL SPECIES 3 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B.p.a #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.w #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.w #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a.e ##31 ENSGT00950000182958.a.b.b.j.i.a.f.a ##31 ENSGT00950000182958.a.b.b.j.i.b.a.c ##31 ENSGT00950000182958.a.b.b.j.i.b.a.d ##31 ENSGT01090000260018.B.b Canis_lupus ANCESTRAL SPECIES 2 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000153096.b.c.b.b.h ENSGT00940000161804.c.a.a ENSGT00940000158690 #13 ENSGT01050000244891.B.p.a #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.w #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.w #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a.e ##31 ENSGT00950000182958.a.b.b.j.i.a.f.a.b ##31 ENSGT00950000182958.a.b.b.j.i.b.a.c ##31 ENSGT00950000182958.a.b.b.j.i.b.a.d ##31 ENSGT01090000260018.B.b.o Dog MODERN SPECIES 34 BAIAP2L1 (ENSCAFG00845009005) #9 NPTX2 (ENSCAFG00845004136) #10 TMEM130 (ENSCAFG00845004094) #11 TRRAP (ENSCAFG00845003973) #12 ENSCAFG00845003892 ENSCAFG00845003878 SMURF1 (ENSCAFG00845003851) #13 ENSCAFG00845003829 #14 MYH16 (ENSCAFG00845003682) #15 ARPC1A (ENSCAFG00845003616) #16 PDAP1 (ENSCAFG00845003605) #19 BUD31 (ENSCAFG00845003589) #20 PTCD1 (ENSCAFG00845003559) #21 ARPC1B (ENSCAFG00845003541) #17 ATP5J2 (ENSCAFG00845003518) #23 CPSF4 (ENSCAFG00845003492) #22 ENSCAFG00845003476 ZNF789 (ENSCAFG00845003457) #25 ZNF394 (ENSCAFG00845003436) #24 ZKSCAN5 (ENSCAFG00845003412) #26 FAM200A (ENSCAFG00845003383) #27 ZNF655 (ENSCAFG00845003343) #28 TMEM225B (ENSCAFG00845003304) #29 ENSCAFG00845003272 #30 OR1F15 (ENSCAFG00845003253) CYP3A26 (ENSCAFG00845003103) ##31 OR2AE1 (ENSCAFG00845002965) TRIM4 (ENSCAFG00845002953) #37 ENSCAFG00845002934 AZGP1 (ENSCAFG00845002917) ZKSCAN1 (ENSCAFG00845002866) Dingo MODERN SPECIES 351 BRI3 (ENSCAFG00020016791) #8 BAIAP2L1 (ENSCAFG00020016786) #9 NPTX2 (ENSCAFG00020016774) #10 TMEM130 (ENSCAFG00020016766) #11 TRRAP (ENSCAFG00020015718) #12 ENSCAFG00020015608 ENSCAFG00020015606 SMURF1 (ENSCAFG00020014606) #13 KPNA7 (ENSCAFG00020014578) #14 ENSCAFG00020014574 #15 ARPC1A (ENSCAFG00020014569) #16 ARPC1B (ENSCAFG00020014497) #17 PDAP1 (ENSCAFG00020014491) #19 BUD31 (ENSCAFG00020014486) #20 PTCD1 (ENSCAFG00020014480) #21 CPSF4 (ENSCAFG00020014462) #22 ENSCAFG00020014459 #23 ENSCAFG00020014458 ZNF789 (ENSCAFG00020014455) #25 ZNF394 (ENSCAFG00020014454) #24 ZKSCAN5 (ENSCAFG00020014453) #26 FAM200A (ENSCAFG00020014452) #27 ENSCAFG00020014451 TMEM225B (ENSCAFG00020014448) #29 ZSCAN25 (ENSCAFG00020014447) #30 ENSCAFG00020014443 ENSCAFG00020014437 ##31 ENSCAFG00020014417 ##31 ENSCAFG00020014350 ##31 ENSCAFG00020014292 ##31 OR2AE1 (ENSCAFG00020014287) Red fox MODERN SPECIES 218 BRI3 (ENSVVUG00000015104) #8 BAIAP2L1 (ENSVVUG00000015091) #9 NPTX2 (ENSVVUG00000015063) #10 ENSVVUG00000015058 TMEM130 (ENSVVUG00000015055) #11 ENSVVUG00000015052 TRRAP (ENSVVUG00000011404) #12 SMURF1 (ENSVVUG00000009130) #13 ENSVVUG00000009096 #14 ENSVVUG00000009006 #15 ARPC1A (ENSVVUG00000008994) #16 ARPC1B (ENSVVUG00000008857) #17 PDAP1 (ENSVVUG00000008843) #19 BUD31 (ENSVVUG00000008841) #20 PTCD1 (ENSVVUG00000008836) #21 CPSF4 (ENSVVUG00000008824) #22 ENSVVUG00000008815 ZNF394 (ENSVVUG00000008797) #24 ZKSCAN5 (ENSVVUG00000008758) #26 FAM200A (ENSVVUG00000008745) #27 ZNF655 (ENSVVUG00000008738) #28 TMEM225B (ENSVVUG00000008732) #29 ZSCAN25 (ENSVVUG00000008713) #30 ENSVVUG00000008703 ENSVVUG00000008658 ##31 Caniformia_b ANCESTRAL SPECIES 7 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT00390000006548.b.k.j.b ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.i.a ##31 ENSGT00950000182958.a.b.b.j.i.b.a ##31 ENSGT00950000182958.a.b.b.j.i.b.b ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Mustelinae ANCESTRAL SPECIES 64 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 American mink MODERN SPECIES 487 TMEM130 (ENSNVIG00000005922) #11 ENSNVIG00000005938 #12 ENSNVIG00000005969 #12 SMURF1 (ENSNVIG00000006131) #13 KPNA7 (ENSNVIG00000007636) #14 ENSNVIG00000007675 #15 ARPC1A (ENSNVIG00000007739) #16 ARPC1B (ENSNVIG00000007787) #17 PDAP1 (ENSNVIG00000007834) #19 BUD31 (ENSNVIG00000007866) #20 PTCD1 (ENSNVIG00000007876) #21 CPSF4 (ENSNVIG00000007981) #22 ENSNVIG00000008040 #23 ENSNVIG00000008074 ZNF789 (ENSNVIG00000008084) #25 ENSNVIG00000008098 #24 ZKSCAN5 (ENSNVIG00000008113) #26 ZNF655 (ENSNVIG00000008181) #28 TMEM225B (ENSNVIG00000008271) #29 ZSCAN25 (ENSNVIG00000008324) #30 ENSNVIG00000008363 Ferret MODERN SPECIES 366 BHLHA15 (ENSMPUG00000020102) TECPR1 (ENSMPUG00000016564) #7 BRI3 (ENSMPUG00000016562) #8 BAIAP2L1 (ENSMPUG00000016561) #9 ENSMPUG00000016560 NPTX2 (ENSMPUG00000016559) #10 TMEM130 (ENSMPUG00000016558) #11 TRRAP (ENSMPUG00000016556) #12 SMURF1 (ENSMPUG00000016554) #13 KPNA7 (ENSMPUG00000016543) #14 ENSMPUG00000016523 #15 ARPC1B (ENSMPUG00000016522) #17 PDAP1 (ENSMPUG00000016521) #19 BUD31 (ENSMPUG00000016519) #20 PTCD1 (ENSMPUG00000016518) #21 CPSF4 (ENSMPUG00000016508) #22 ENSMPUG00000016506 ZNF789 (ENSMPUG00000016504) #25 ZNF394 (ENSMPUG00000016503) #24 ENSMPUG00000016494 ENSMPUG00000016492 TMEM225B (ENSMPUG00000016491) #29 ZSCAN25 (ENSMPUG00000016490) #30 ENSMPUG00000020101 Ursidae ANCESTRAL SPECIES 3 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT00390000006548.b.k.j.b ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690.b #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.b #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.v.b.a.b #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.i.a ##31 ENSGT00950000182958.a.b.b.j.i.b.a ##31 ENSGT00950000182958.a.b.b.j.i.b.b ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a Giant Panda MODERN SPECIES 1 ENSAMEG00000008945 TECPR1 (ENSAMEG00000008910) #7 BRI3 (ENSAMEG00000025389) #8 BAIAP2L1 (ENSAMEG00000008876) #9 NPTX2 (ENSAMEG00000006901) #10 TMEM130 (ENSAMEG00000006881) #11 TRRAP (ENSAMEG00000006794) #12 SMURF1 (ENSAMEG00000006728) #13 KPNA7 (ENSAMEG00000006691) #14 ENSAMEG00000006326 #15 ARPC1A (ENSAMEG00000006322) #16 ARPC1B (ENSAMEG00000006289) #17 PDAP1 (ENSAMEG00000006274) #19 BUD31 (ENSAMEG00000006269) #20 PTCD1 (ENSAMEG00000006224) #21 CPSF4 (ENSAMEG00000006252) #22 ENSAMEG00000027254 #23 ENSAMEG00000010231 ZNF789 (ENSAMEG00000006221) #25 ZNF394 (ENSAMEG00000024236) #24 ZKSCAN5 (ENSAMEG00000006213) #26 FAM200A (ENSAMEG00000030624) #27 ZNF655 (ENSAMEG00000006210) #28 TMEM225B (ENSAMEG00000006209) #29 ZSCAN25 (ENSAMEG00000028606) #30 ENSAMEG00000004376 ##31 ENSAMEG00000031466 #37 ENSAMEG00000019483 ENSAMEG00000011252 ENSAMEG00000011243 ENSAMEG00000011241 Ursus ANCESTRAL SPECIES 32 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT00390000006548.b.k.j.b ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690.b #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a.b #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.w #23 ENSGT00940000154488.A.b.a.b ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00940000165768 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.i.a ##31 ENSGT00950000182958.a.b.b.j.i.b.a ##31 ENSGT00950000182958.a.b.b.j.i.b.b ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Polar bear MODERN SPECIES 212 TECPR1 (ENSUMAG00000009072) #7 BRI3 (ENSUMAG00000009119) #8 BAIAP2L1 (ENSUMAG00000009124) #9 ENSUMAG00000009130 NPTX2 (ENSUMAG00000009137) #10 TMEM130 (ENSUMAG00000009146) #11 ENSUMAG00000009153 #12 SMURF1 (ENSUMAG00000009290) #13 KPNA7 (ENSUMAG00000009427) #14 ENSUMAG00000009433 #15 ARPC1A (ENSUMAG00000009440) #16 ARPC1B (ENSUMAG00000009445) #17 PDAP1 (ENSUMAG00000009448) #19 BUD31 (ENSUMAG00000009451) #20 PTCD1 (ENSUMAG00000009455) #21 CPSF4 (ENSUMAG00000009474) #22 ENSUMAG00000009476 #23 ENSUMAG00000009480 ZNF789 (ENSUMAG00000009482) #25 ZNF394 (ENSUMAG00000009484) #24 ZKSCAN5 (ENSUMAG00000009486) #26 FAM200A (ENSUMAG00000009489) #27 ENSUMAG00000009492 ENSUMAG00000009495 #29 ZSCAN25 (ENSUMAG00000009498) #30 ENSUMAG00000009516 ##31 ENSUMAG00000009725 ##31 ENSUMAG00000009839 ##31 OR2AE1 (ENSUMAG00000009952) TRIM4 (ENSUMAG00000009953) #37 GJC3 (ENSUMAG00000009957) American black bear MODERN SPECIES 1742 KPNA7 (ENSUAMG00000008014) #14 ENSUAMG00000008018 #15 ARPC1A (ENSUAMG00000008037) #16 ARPC1B (ENSUAMG00000008040) #17 PDAP1 (ENSUAMG00000008045) #19 BUD31 (ENSUAMG00000008048) #20 PTCD1 (ENSUAMG00000008049) #21 CPSF4 (ENSUAMG00000008051) #22 Laurasiatheria_c ANCESTRAL SPECIES 12 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b.a ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.h.a ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Chiroptera ANCESTRAL SPECIES 37 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b.a ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.h.a ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Megabat MODERN SPECIES 3872 ENSPVAG00000007520 #15 ARPC1A (ENSPVAG00000007521) #16 ARPC1B (ENSPVAG00000007523) #17 PDAP1 (ENSPVAG00000007524) #19 BUD31 (ENSPVAG00000007527) #20 PTCD1 (ENSPVAG00000007529) #21 CPSF4 (ENSPVAG00000007531) #22 ATP5MF (ENSPVAG00000007533) #23 Microchiroptera ANCESTRAL SPECIES 39 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b.a ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.h.a ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a Microbat MODERN SPECIES 937 MARCHF3 (ENSMLUG00000009747) C5orf63 (ENSMLUG00000002467) MEGF10 (ENSMLUG00000010818) PRRC1 (ENSMLUG00000010866) CTXN3 (ENSMLUG00000009416) SLC12A2 (ENSMLUG00000008327) FBN2 (ENSMLUG00000008374) SLC27A6 (ENSMLUG00000011142) ISOC1 (ENSMLUG00000023846) ENSMLUG00000029686 ENSMLUG00000010877 #15 ARPC1A (ENSMLUG00000010912) #16 ARPC1B (ENSMLUG00000010933) #17 PDAP1 (ENSMLUG00000010959) #19 BUD31 (ENSMLUG00000010973) #20 CPSF4 (ENSMLUG00000010980) #22 PTCD1 (ENSMLUG00000010994) #21 ZNF789 (ENSMLUG00000017347) #25 ENSMLUG00000017348 #24 ENSMLUG00000017349 ENSMLUG00000017351 TMEM225B (ENSMLUG00000023300) #29 ENSMLUG00000017353 #30 ENSMLUG00000027083 ENSMLUG00000024696 ##31 ENSMLUG00000026442 ##31 TRIM4 (ENSMLUG00000001995) #37 GJC3 (ENSMLUG00000002012) ENSMLUG00000029391 ENSMLUG00000026717 ENSMLUG00000014153 Greater horseshoe bat MODERN SPECIES 25 C5orf63 (ENSRFEG00010001015) MEGF10 (ENSRFEG00010001053) PRRC1 (ENSRFEG00010001126) CTXN3 (ENSRFEG00010001164) CCDC192 (ENSRFEG00010001188) SLC12A2 (ENSRFEG00010001326) FBN2 (ENSRFEG00010001705) SLC27A6 (ENSRFEG00010001758) ENSRFEG00010001776 ENSRFEG00010001816 #15 ARPC1A (ENSRFEG00010001888) #16 ARPC1B (ENSRFEG00010001904) #17 PDAP1 (ENSRFEG00010001955) #19 BUD31 (ENSRFEG00010001998) #20 PTCD1 (ENSRFEG00010002023) #21 CPSF4 (ENSRFEG00010002049) #22 ENSRFEG00010002114 #23 ENSRFEG00010002156 ZNF789 (ENSRFEG00010002174) #25 ZNF394 (ENSRFEG00010002189) #24 ZKSCAN5 (ENSRFEG00010002216) #26 FAM200A (ENSRFEG00010002229) #27 ZNF655 (ENSRFEG00010002275) #28 ENSRFEG00010002302 TMEM225B (ENSRFEG00010002313) #29 ZSCAN25 (ENSRFEG00010002331) #30 ENSRFEG00010002337 ENSRFEG00010002456 ##31 ENSRFEG00010002590 ENSRFEG00010002619 #32 TRIM4 (ENSRFEG00010002653) #37 Equus ANCESTRAL SPECIES 22 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.o #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000154488.A.b.a.b.a ENSGT01050000244868.a.a.a.a.a.b.m.a ENSGT00940000154249.a.a ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.h.b.b.a ##31 ENSGT00950000183016.E.b.a.b.b.a.a.b.a.b.a ENSGT00950000182958.a.b.b.j.h.b.a ##31 ENSGT00950000182958.a.b.b.j.g.a ##31 ENSGT00950000182958.a.b.b.j.h.a ##31 Donkey MODERN SPECIES 5 LMTK2 (ENSEASG00005000819) BHLHA15 (ENSEASG00005000829) TECPR1 (ENSEASG00005000888) #7 ENSEASG00005023687 BAIAP2L1 (ENSEASG00005001273) #9 NPTX2 (ENSEASG00005001282) #10 TMEM130 (ENSEASG00005001296) #11 TRRAP (ENSEASG00005001513) #12 SMURF1 (ENSEASG00005002115) #13 KPNA7 (ENSEASG00005002435) #14 ENSEASG00005002444 #16 ARPC1B (ENSEASG00005002462) #17 PDAP1 (ENSEASG00005033136) #19 BUD31 (ENSEASG00005032549) #20 PTCD1 (ENSEASG00005002480) #21 ENSEASG00005002487 #22 ENSEASG00005030979 #23 Horse MODERN SPECIES 4 OCM (ENSECAG00000000243) LMTK2 (ENSECAG00000019598) TECPR1 (ENSECAG00000003104) #7 ENSECAG00000031100 #8 BAIAP2L1 (ENSECAG00000012734) #9 NPTX2 (ENSECAG00000012370) #10 TMEM130 (ENSECAG00000009541) #11 TRRAP (ENSECAG00000010540) #12 SMURF1 (ENSECAG00000017400) #13 KPNA7 (ENSECAG00000000554) #14 ENSECAG00000050899 #16 ARPC1B (ENSECAG00000024991) #17 PDAP1 (ENSECAG00000024426) #19 BUD31 (ENSECAG00000024151) #20 PTCD1 (ENSECAG00000016617) #21 CPSF4 (ENSECAG00000007525) #22 ATP5MF (ENSECAG00000002088) #23 ENSECAG00000036787 ENSECAG00000022200 ZNF789 (ENSECAG00000011061) #25 ENSECAG00000040295 ZNF394 (ENSECAG00000011549) #24 ZKSCAN5 (ENSECAG00000012353) #26 FAM200A (ENSECAG00000038549) #27 ZNF655 (ENSECAG00000019599) #28 ENSECAG00000058567 ZSCAN25 (ENSECAG00000019610) #30 ENSECAG00000048286 ENSECAG00000037404 ##31 ENSECAG00000046571 ##31 ENSECAG00000058608 Artiodactyla ANCESTRAL SPECIES 10 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Suina ANCESTRAL SPECIES 46 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00940000153104.f ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.k.a.c ##31 ENSGT00950000182958.a.b.b.j.k.b ##31 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.d ##31 Chacoan peccary MODERN SPECIES 833 BHLHA15 (ENSCWAG00000010732) TECPR1 (ENSCWAG00000010756) #7 BRI3 (ENSCWAG00000010841) #8 BAIAP2L1 (ENSCWAG00000010874) #9 NPTX2 (ENSCWAG00000010978) #10 TMEM130 (ENSCWAG00000011040) #11 TRRAP (ENSCWAG00000011543) #12 SMURF1 (ENSCWAG00000011777) #13 KPNA7 (ENSCWAG00000011846) #14 ENSCWAG00000011967 #15 ARPC1A (ENSCWAG00000012355) #16 ARPC1B (ENSCWAG00000012397) #17 PDAP1 (ENSCWAG00000012444) #19 BUD31 (ENSCWAG00000012494) #20 PTCD1 (ENSCWAG00000012549) #21 CPSF4 (ENSCWAG00000012575) #22 ENSCWAG00000012721 #23 ENSCWAG00000012841 #24 ZKSCAN5 (ENSCWAG00000012872) #26 ZNF789 (ENSCWAG00000012955) #25 FAM200A (ENSCWAG00000012995) #27 ZNF655 (ENSCWAG00000013035) #28 TMEM225B (ENSCWAG00000013216) #29 ZSCAN25 (ENSCWAG00000013260) #30 ENSCWAG00000013302 ENSCWAG00000013404 ##31 ENSCWAG00000015518 ##31 Pig MODERN SPECIES 11 BHLHA15 (ENSSSCG00000038489) TECPR1 (ENSSSCG00000007601) #7 BRI3 (ENSSSCG00000037605) #8 BAIAP2L1 (ENSSSCG00000007602) #9 NPTX2 (ENSSSCG00000007603) #10 TMEM130 (ENSSSCG00000007605) #11 TRRAP (ENSSSCG00000007606) #12 SMURF1 (ENSSSCG00000030153) #13 KPNA7 (ENSSSCG00000007607) #14 ARPC1B (ENSSSCG00000007625) #17 ENSSSCG00000035534 #15 ARPC1A (ENSSSCG00000007609) #16 PDAP1 (ENSSSCG00000033450) #19 BUD31 (ENSSSCG00000007623) #20 PTCD1 (ENSSSCG00000007622) #21 CPSF4 (ENSSSCG00000026896) #22 ENSSSCG00000034019 #23 ZNF394 (ENSSSCG00000036665) #24 ZKSCAN5 (ENSSSCG00000031809) #26 ZNF789 (ENSSSCG00000007618) #25 FAM200A (ENSSSCG00000029175) #27 ZNF655 (ENSSSCG00000007617) #28 ENSSSCG00000031485 TMEM225B (ENSSSCG00000043842) #29 ZSCAN25 (ENSSSCG00000039842) #30 ENSSSCG00000023320 ##31 ENSSSCG00000060626 CYP3A29 (ENSSSCG00000052306) ##31 ENSSSCG00000038518 ##31 ENSSSCG00000053468 ##31 CEP20 (ENSSSCG00000033377) Artiodactyla_a ANCESTRAL SPECIES 10 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Camelidae ANCESTRAL SPECIES 24 ENSGT00390000004713 ENSGT00940000161875 ENSGT00940000158475 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00760000119441 #28 ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00950000182958.a.b.b.j.l.a ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 Alpaca MODERN SPECIES 3419 ENSVPAG00000001522 #22 Arabian camel MODERN SPECIES 9 ENSCDRG00005014012 LMTK2 (ENSCDRG00005013925) TECPR1 (ENSCDRG00005013716) #7 BRI3 (ENSCDRG00005013667) #8 BAIAP2L1 (ENSCDRG00005013606) #9 NPTX2 (ENSCDRG00005013554) #10 TMEM130 (ENSCDRG00005013368) #11 ENSCDRG00005013327 #12 ENSCDRG00005012884 #12 SMURF1 (ENSCDRG00005012771) #13 KPNA7 (ENSCDRG00005012622) #14 ARPC1B (ENSCDRG00005012372) #17 PDAP1 (ENSCDRG00005012264) #19 BUD31 (ENSCDRG00005012145) #20 PTCD1 (ENSCDRG00005011961) #21 CPSF4 (ENSCDRG00005011554) #22 ENSCDRG00005011410 #23 ENSCDRG00005011387 ZNF394 (ENSCDRG00005011366) #24 ZKSCAN5 (ENSCDRG00005011297) #26 ZNF789 (ENSCDRG00005011225) #25 ZNF655 (ENSCDRG00005011089) #28 ENSCDRG00005011047 TMEM225B (ENSCDRG00005011012) #29 ZSCAN25 (ENSCDRG00005010978) #30 ENSCDRG00005010875 ##31 ENSCDRG00005010827 ENSCDRG00005010801 ENSCDRG00005010679 ##31 ENSCDRG00005010643 ##31 ENSCDRG00005010591 ##31 Artiodactyla_b ANCESTRAL SPECIES 9 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.q.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Pecora ANCESTRAL SPECIES 10 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b ##31 ENSGT01090000260018.B.b ENSGT00940000163330 #37 Yarkand deer MODERN SPECIES 1 LMTK2 (ENSCHYG00000017591) BHLHA15 (ENSCHYG00000017555) TECPR1 (ENSCHYG00000017360) #7 BRI3 (ENSCHYG00000017314) #8 BAIAP2L1 (ENSCHYG00000017061) #9 NPTX2 (ENSCHYG00000016997) #10 TMEM130 (ENSCHYG00000016668) #11 TRRAP (ENSCHYG00000013971) #12 SMURF1 (ENSCHYG00000013359) #13 KPNA7 (ENSCHYG00000013180) #14 ENSCHYG00000013066 #16 ARPC1B (ENSCHYG00000012964) #17 PDAP1 (ENSCHYG00000012875) #19 BUD31 (ENSCHYG00000012781) #20 PTCD1 (ENSCHYG00000012720) #21 CPSF4 (ENSCHYG00000012568) #22 ENSCHYG00000012401 #23 ENSCHYG00000012361 ZNF394 (ENSCHYG00000012317) #24 ZKSCAN5 (ENSCHYG00000012276) #26 ENSCHYG00000012259 ZNF789 (ENSCHYG00000012222) #25 ZNF655 (ENSCHYG00000012070) #28 ENSCHYG00000012030 TMEM225B (ENSCHYG00000011916) #29 ZSCAN25 (ENSCHYG00000011869) #30 ENSCHYG00000011123 ##31 OR2AE1 (ENSCHYG00000010965) TRIM4 (ENSCHYG00000010879) #37 GJC3 (ENSCHYG00000010841) AZGP1 (ENSCHYG00000010798) Percora_a ANCESTRAL SPECIES 9 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a.d #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00940000153104.f ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.b ##31 Siberian musk deer MODERN SPECIES 1230 LMTK2 (ENSMMSG00000015302) BHLHA15 (ENSMMSG00000015278) TECPR1 (ENSMMSG00000015173) #7 BRI3 (ENSMMSG00000015142) #8 BAIAP2L1 (ENSMMSG00000015095) #9 NPTX2 (ENSMMSG00000015078) #10 TMEM130 (ENSMMSG00000015018) #11 TRRAP (ENSMMSG00000014927) #12 SMURF1 (ENSMMSG00000014815) #13 ENSMMSG00000014765 #14 ENSMMSG00000014733 #16 ARPC1B (ENSMMSG00000014707) #17 PDAP1 (ENSMMSG00000014684) #19 BUD31 (ENSMMSG00000014656) #20 PTCD1 (ENSMMSG00000014637) #21 CPSF4 (ENSMMSG00000014539) #22 ENSMMSG00000014510 #23 ZNF394 (ENSMMSG00000014499) #24 ZKSCAN5 (ENSMMSG00000014471) #26 ZNF789 (ENSMMSG00000014456) #25 ZNF655 (ENSMMSG00000014427) #28 TMEM225B (ENSMMSG00000014403) #29 ZSCAN25 (ENSMMSG00000014381) #30 ENSMMSG00000014367 ENSMMSG00000014350 ENSMMSG00000014257 ##31 ENSMMSG00000013676 ##31 OR2AE1 (ENSMMSG00000013591) TRIM4 (ENSMMSG00000013574) #37 GJC3 (ENSMMSG00000013564) AZGP1 (ENSMMSG00000013554) Bovidae ANCESTRAL SPECIES 11 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a.d #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00940000153104.f ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.a ##31 Caprinae ANCESTRAL SPECIES 7 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b.a.a.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.y #23 ENSGT00940000154488.A.b.a.b ENSGT00510000046986.x.a.d #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00760000119441 #28 ENSGT00940000153104.f ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.b.a ##31 ENSGT01090000260018.B.b Goat MODERN SPECIES 17 LMTK2 (ENSCHIG00000023995) BHLHA15 (ENSCHIG00000008225) TECPR1 (ENSCHIG00000025300) #7 BRI3 (ENSCHIG00000005545) #8 BAIAP2L1 (ENSCHIG00000003641) #9 NPTX2 (ENSCHIG00000016145) #10 TMEM130 (ENSCHIG00000025196) #11 TRRAP (ENSCHIG00000025236) #12 SMURF1 (ENSCHIG00000017881) #13 KPNA7 (ENSCHIG00000026332) #14 ENSCHIG00000013674 #16 ARPC1B (ENSCHIG00000021068) #17 PDAP1 (ENSCHIG00000024190) #19 BUD31 (ENSCHIG00000015455) #20 PTCD1 (ENSCHIG00000027000) #21 CPSF4 (ENSCHIG00000014313) #22 ENSCHIG00000021771 #23 ENSCHIG00000005075 ZNF394 (ENSCHIG00000016834) #24 ZKSCAN5 (ENSCHIG00000024258) #26 ZNF789 (ENSCHIG00000013695) #25 ZNF655 (ENSCHIG00000025621) #28 ENSCHIG00000023445 TMEM225B (ENSCHIG00000014873) #29 ZSCAN25 (ENSCHIG00000023626) #30 CYP3A24 (ENSCHIG00000012426) ##31 CYP3A76 (ENSCHIG00000022924) ##31 ENSCHIG00000009100 ##31 OR2AE1 (ENSCHIG00000010371) TRIM4 (ENSCHIG00000013337) #37 GJC3 (ENSCHIG00000005791) Rambouillet Sheep MODERN SPECIES 16 ENSOARG00020023544 ENSOARG00020023523 BHLHA15 (ENSOARG00020023426) TECPR1 (ENSOARG00020023364) #7 BRI3 (ENSOARG00020023331) #8 BAIAP2L1 (ENSOARG00020023297) #9 NPTX2 (ENSOARG00020023277) #10 TMEM130 (ENSOARG00020023081) #11 TRRAP (ENSOARG00020022843) #12 SMURF1 (ENSOARG00020022545) #13 KPNA7 (ENSOARG00020022480) #14 ENSOARG00020022442 #16 ARPC1B (ENSOARG00020022406) #17 PDAP1 (ENSOARG00020022360) #19 BUD31 (ENSOARG00020022312) #20 CPSF4 (ENSOARG00020022199) #22 ENSOARG00020022141 #23 ZNF394 (ENSOARG00020022119) #24 ZKSCAN5 (ENSOARG00020022085) #26 ZNF789 (ENSOARG00020022053) #25 ZNF655 (ENSOARG00020021933) #28 TMEM225B (ENSOARG00020021911) #29 ZSCAN25 (ENSOARG00020021884) #30 ENSOARG00020021858 CYP3A24 (ENSOARG00020021603) ##31 ENSOARG00020021338 ##31 ENSOARG00020021224 ##31 OR2AE1 (ENSOARG00020021194) TRIM4 (ENSOARG00020021045) #37 GJC3 (ENSOARG00020021018) AZGP1 (ENSOARG00020020969) Bovinae ANCESTRAL SPECIES 7 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b #16 ENSGT00950000183183.b.b.m #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a.d #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.b ##31 ENSGT01090000260018.B.b American bison MODERN SPECIES 3140 LMTK2 (ENSBBBG00000010132) BHLHA15 (ENSBBBG00000010137) BRI3 (ENSBBBG00000010143) #8 ENSBBBG00000001713 BAIAP2L1 (ENSBBBG00000010154) #9 NPTX2 (ENSBBBG00000001718) #10 TMEM130 (ENSBBBG00000010173) #11 TRRAP (ENSBBBG00000000060) #12 SMURF1 (ENSBBBG00000010293) #13 KPNA7 (ENSBBBG00000001770) #14 ENSBBBG00000008539 #16 ENSBBBG00000010343 #17 PDAP1 (ENSBBBG00000010357) #19 BUD31 (ENSBBBG00000010369) #20 PTCD1 (ENSBBBG00000010388) #21 CPSF4 (ENSBBBG00000010423) #22 ENSBBBG00000010437 #23 ZNF394 (ENSBBBG00000010440) #24 ZKSCAN5 (ENSBBBG00000001814) #26 ZNF789 (ENSBBBG00000010449) #25 ZNF655 (ENSBBBG00000010475) #28 ENSBBBG00000001826 #29 ZSCAN25 (ENSBBBG00000010489) #30 ENSBBBG00000001832 ENSBBBG00000010568 ##31 ENSBBBG00000007021 ##31 ENSBBBG00000001861 ##31 ENSBBBG00000010627 ##31 Bos ANCESTRAL SPECIES 9 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b #16 ENSGT00950000183183.b.b.m #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a.d #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.a.b.a.b ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.b ##31 Bos_b ANCESTRAL SPECIES 6 ENSGT00940000158475 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.a.b #16 ENSGT00950000183183.b.b.m #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a.d #23 ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.a.b.a.b ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.a ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.b.b.b ##31 ENSGT01090000260018.B.b Hybrid Bos Indicus MODERN SPECIES 17 LMTK2 (ENSBIXG00005002294) BAIAP2L1 (ENSBIXG00005015423) #9 BHLHA15 (ENSBIXG00005015363) TECPR1 (ENSBIXG00005015345) #7 BRI3 (ENSBIXG00005015306) #8 NPTX2 (ENSBIXG00005015270) #10 TMEM130 (ENSBIXG00005015225) #11 TRRAP (ENSBIXG00005015045) #12 SMURF1 (ENSBIXG00005005409) #13 KPNA7 (ENSBIXG00005014735) #14 ENSBIXG00005002057 #16 ENSBIXG00005014625 #17 PDAP1 (ENSBIXG00005014563) #19 BUD31 (ENSBIXG00005014534) #20 PTCD1 (ENSBIXG00005014503) #21 CPSF4 (ENSBIXG00005014471) #22 ENSBIXG00005014397 #23 ENSBIXG00005014375 ENSBIXG00005001905 #25 ENSBIXG00005014311 ZKSCAN5 (ENSBIXG00005001885) #26 ENSBIXG00005014283 ZNF789 (ENSBIXG00005014273) #25 FAM200A (ENSBIXG00005014258) #27 ZNF655 (ENSBIXG00005014236) #28 ENSBIXG00005014180 #29 ENSBIXG00005014162 ZSCAN25 (ENSBIXG00005014135) #30 ENSBIXG00005014112 ENSBIXG00005014091 ##31 ENSBIXG00005013966 ##31 Cow MODERN SPECIES 17 LMTK2 (ENSBTAG00000004135) BHLHA15 (ENSBTAG00000046010) TECPR1 (ENSBTAG00000051678) #7 BRI3 (ENSBTAG00000022825) #8 BAIAP2L1 (ENSBTAG00000019181) #9 NPTX2 (ENSBTAG00000045896) #10 TMEM130 (ENSBTAG00000005679) #11 TRRAP (ENSBTAG00000007113) #12 SMURF1 (ENSBTAG00000007118) #13 KPNA7 (ENSBTAG00000015737) #14 ARPC1A (ENSBTAG00000004242) #16 ARPC1B (ENSBTAG00000046248) #17 PDAP1 (ENSBTAG00000044040) #19 BUD31 (ENSBTAG00000020439) #20 PTCD1 (ENSBTAG00000020440) #21 CPSF4 (ENSBTAG00000002090) #22 ATP5MF (ENSBTAG00000002094) #23 ZNF394 (ENSBTAG00000016190) #24 ENSBTAG00000053161 ZKSCAN5 (ENSBTAG00000049731) #26 ENSBTAG00000048341 ZNF789 (ENSBTAG00000047572) #25 FAM200A (ENSBTAG00000051481) #27 ZNF655 (ENSBTAG00000030951) #28 TMEM225B (ENSBTAG00000039720) #29 ZSCAN25 (ENSBTAG00000039512) #30 CYP3A24 (ENSBTAG00000054260) ##31 CYP3A76 (ENSBTAG00000053645) ##31 CYP3A74 (ENSBTAG00000052665) ##31 CYP3A28 (ENSBTAG00000049666) ##31 OR2AE1 (ENSBTAG00000009840) Bos_a ANCESTRAL SPECIES 35 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a.q.a.c.b.a #16 ENSGT00950000183183.b.a.q.b #16 ENSGT00950000183183.b.b.m #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a.d #23 ENSGT00940000154488.A.b.a.b ENSGT00940000162347 #24 ENSGT00940000154740.a.a.c.b ENSGT00940000162299 #26 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.a.b.a.b ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00510000055200.a #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a.b.b.a.b ##31 ENSGT00950000182958.a.b.b.j.k.a.a ##31 ENSGT01090000260018.B.b Wild yak MODERN SPECIES 538 ENSBMUG00000023044 #16 ENSBMUG00000023068 #17 PDAP1 (ENSBMUG00000023105) #19 BUD31 (ENSBMUG00000023129) #20 PTCD1 (ENSBMUG00000023153) #21 CPSF4 (ENSBMUG00000023198) #22 ENSBMUG00000023216 #23 ENSBMUG00000023229 ZNF394 (ENSBMUG00000023235) #24 ENSBMUG00000023244 ENSBMUG00000023259 #26 ZNF789 (ENSBMUG00000023267) #25 FAM200A (ENSBMUG00000023277) #27 ZNF655 (ENSBMUG00000023339) #28 ENSBMUG00000023294 TMEM225B (ENSBMUG00000023356) #29 ZSCAN25 (ENSBMUG00000023364) #30 ENSBMUG00000023367 ENSBMUG00000023477 ##31 OR2AE1 (ENSBMUG00000023533) TRIM4 (ENSBMUG00000023538) #37 Domestic yak MODERN SPECIES 18 TECPR1 (ENSBGRG00000025127) #7 BRI3 (ENSBGRG00000025097) #8 BAIAP2L1 (ENSBGRG00000025058) #9 NPTX2 (ENSBGRG00000025022) #10 TMEM130 (ENSBGRG00000024946) #11 TRRAP (ENSBGRG00000024841) #12 ENSBGRG00000024800 SMURF1 (ENSBGRG00000024646) #13 KPNA7 (ENSBGRG00000024547) #14 ENSBGRG00000024515 #16 ENSBGRG00000024499 #16 ENSBGRG00000024483 #17 PDAP1 (ENSBGRG00000024415) #19 BUD31 (ENSBGRG00000024361) #20 PTCD1 (ENSBGRG00000024303) #21 CPSF4 (ENSBGRG00000024142) #22 ENSBGRG00000024105 #23 ENSBGRG00000024073 ENSBGRG00000024059 ZNF394 (ENSBGRG00000024040) #24 ZKSCAN5 (ENSBGRG00000024023) #26 ENSBGRG00000024016 ZNF789 (ENSBGRG00000023983) #25 FAM200A (ENSBGRG00000023967) #27 ZNF655 (ENSBGRG00000023838) #28 ENSBGRG00000023765 #29 ZSCAN25 (ENSBGRG00000023712) #30 ENSBGRG00000022004 ##31 ENSBGRG00000020414 ##31 TRIM4 (ENSBGRG00000020221) #37 GJC3 (ENSBGRG00000020166) Cetacea ANCESTRAL SPECIES 3 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.q.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT00950000182958.a.b.b.j.k.b ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT00940000161592 Blue whale MODERN SPECIES 6 BHLHA15 (ENSBMSG00010015945) TECPR1 (ENSBMSG00010015935) #7 ENSBMSG00010015916 BAIAP2L1 (ENSBMSG00010015891) #9 NPTX2 (ENSBMSG00010015873) #10 TMEM130 (ENSBMSG00010015649) #11 TRRAP (ENSBMSG00010014624) #12 SMURF1 (ENSBMSG00010014386) #13 KPNA7 (ENSBMSG00010014304) #14 ENSBMSG00010014169 #15 ENSBMSG00010014113 #16 ARPC1B (ENSBMSG00010014056) #17 PDAP1 (ENSBMSG00010014018) #19 ENSBMSG00010013970 #20 PTCD1 (ENSBMSG00010013917) #21 ENSBMSG00010012551 #22 ENSBMSG00010012514 #23 ENSBMSG00010012488 #25 ZNF394 (ENSBMSG00010012476) #24 ZKSCAN5 (ENSBMSG00010012465) #26 ENSBMSG00010012445 #25 FAM200A (ENSBMSG00010012436) #27 ZNF655 (ENSBMSG00010012412) #28 TMEM225B (ENSBMSG00010012383) #29 ZSCAN25 (ENSBMSG00010012378) #30 ENSBMSG00010012316 ##31 ENSBMSG00010012280 ##31 ENSBMSG00010012262 ENSBMSG00010012179 ##31 ENSBMSG00010012139 TRIM4 (ENSBMSG00010012118) #37 Odontoceti ANCESTRAL SPECIES 3 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.q.a.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT00950000182958.a.b.b.j.k.b ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT00940000161592 Sperm whale MODERN SPECIES 215 ARPC1B (ENSPCTG00005015411) #17 PDAP1 (ENSPCTG00005015297) #19 BUD31 (ENSPCTG00005015188) #20 PTCD1 (ENSPCTG00005015145) #21 CPSF4 (ENSPCTG00005014992) #22 ATP5MF (ENSPCTG00005014816) #23 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.q.a.b.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT00950000182958.a.b.b.j.k.b ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT00940000161592 Dolphin MODERN SPECIES 2531 TRRAP (ENSTTRG00000002957) #12 ENSTTRG00000002991 SMURF1 (ENSTTRG00000002994) #13 KPNA7 (ENSTTRG00000002998) #14 ENSTTRG00000003000 #15 ARPC1A (ENSTTRG00000003002) #16 ARPC1B (ENSTTRG00000003003) #17 PDAP1 (ENSTTRG00000003004) #19 BUD31 (ENSTTRG00000003005) #20 PTCD1 (ENSTTRG00000003006) #21 CPSF4 (ENSTTRG00000003007) #22 ATP5MF (ENSTTRG00000003008) #23 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.q.a.b.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT00950000182958.a.b.b.j.k.b ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT00940000161592 Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.q.a.b.b #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.x.a #23 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00940000163495 #25 ENSGT00940000164024 #27 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT00950000182958.a.b.b.j.k.a ##31 ENSGT00950000182958.a.b.b.j.k.b ##31 ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT00940000161592 Beluga whale MODERN SPECIES 48 BHLHA15 (ENSDLEG00000020448) TECPR1 (ENSDLEG00000020413) #7 BRI3 (ENSDLEG00000020405) #8 BAIAP2L1 (ENSDLEG00000020393) #9 NPTX2 (ENSDLEG00000020388) #10 TMEM130 (ENSDLEG00000020386) #11 TRRAP (ENSDLEG00000016992) #12 SMURF1 (ENSDLEG00000016179) #13 KPNA7 (ENSDLEG00000016100) #14 ENSDLEG00000015938 #15 ARPC1A (ENSDLEG00000015896) #16 ARPC1B (ENSDLEG00000015861) #17 PDAP1 (ENSDLEG00000015839) #19 BUD31 (ENSDLEG00000015820) #20 PTCD1 (ENSDLEG00000015782) #21 CPSF4 (ENSDLEG00000015772) #22 ENSDLEG00000015761 #23 ZNF394 (ENSDLEG00000015750) #24 ZKSCAN5 (ENSDLEG00000015741) #26 ZNF789 (ENSDLEG00000015734) #25 ZNF655 (ENSDLEG00000015709) #28 TMEM225B (ENSDLEG00000015693) #29 ZSCAN25 (ENSDLEG00000015677) #30 ENSDLEG00000015665 ##31 ENSDLEG00000015652 ##31 ENSDLEG00000015622 ##31 TRIM4 (ENSDLEG00000015596) #37 GJC3 (ENSDLEG00000015584) ZKSCAN1 (ENSDLEG00000015572) ZKSCAN1 (ENSDLEG00000015567) ENSDLEG00000015560 Narwhal MODERN SPECIES 299 BHLHA15 (ENSMMNG00015003745) TECPR1 (ENSMMNG00015003675) #7 BRI3 (ENSMMNG00015003639) #8 BAIAP2L1 (ENSMMNG00015003589) #9 NPTX2 (ENSMMNG00015003563) #10 TMEM130 (ENSMMNG00015003509) #11 TRRAP (ENSMMNG00015003087) #12 SMURF1 (ENSMMNG00015002854) #13 KPNA7 (ENSMMNG00015002759) #14 ENSMMNG00015002693 #15 ENSMMNG00015002635 #16 ARPC1B (ENSMMNG00015002613) #17 PDAP1 (ENSMMNG00015002587) #19 BUD31 (ENSMMNG00015002560) #20 PTCD1 (ENSMMNG00015002519) #21 CPSF4 (ENSMMNG00015002457) #22 ENSMMNG00015002418 #23 ZNF394 (ENSMMNG00015002396) #24 ZKSCAN5 (ENSMMNG00015002368) #26 ZNF789 (ENSMMNG00015002337) #25 FAM200A (ENSMMNG00015002312) #27 ZNF655 (ENSMMNG00015002264) #28 ENSMMNG00015002225 TMEM225B (ENSMMNG00015002205) #29 ZSCAN25 (ENSMMNG00015002179) #30 ENSMMNG00015002160 ENSMMNG00015002083 ##31 ENSMMNG00015001865 ##31 TRIM4 (ENSMMNG00015001764) #37 GJC3 (ENSMMNG00015001742) ZKSCAN1 (ENSMMNG00015001718) Vaquita MODERN SPECIES 6 BHLHA15 (ENSPSNG00000012595) TECPR1 (ENSPSNG00000012533) #7 ENSPSNG00000012465 #8 BAIAP2L1 (ENSPSNG00000012292) #9 NPTX2 (ENSPSNG00000012212) #10 TMEM130 (ENSPSNG00000011895) #11 TRRAP (ENSPSNG00000011688) #12 SMURF1 (ENSPSNG00000011505) #13 KPNA7 (ENSPSNG00000011346) #14 ENSPSNG00000010917 #15 ENSPSNG00000010796 #16 ARPC1B (ENSPSNG00000010674) #17 PDAP1 (ENSPSNG00000010590) #19 BUD31 (ENSPSNG00000010482) #20 PTCD1 (ENSPSNG00000010406) #21 CPSF4 (ENSPSNG00000010306) #22 ENSPSNG00000010232 #23 ZNF394 (ENSPSNG00000010193) #24 ZKSCAN5 (ENSPSNG00000010150) #26 ZNF789 (ENSPSNG00000010094) #25 FAM200A (ENSPSNG00000010058) #27 ZNF655 (ENSPSNG00000009816) #28 TMEM225B (ENSPSNG00000013751) #29 ZSCAN25 (ENSPSNG00000013706) #30 ENSPSNG00000013187 ##31 ENSPSNG00000012402 ##31 TRIM4 (ENSPSNG00000012189) #37 GJC3 (ENSPSNG00000012122) ZKSCAN1 (ENSPSNG00000012027) ZSCAN21 (ENSPSNG00000011983) ZNF3 (ENSPSNG00000011910) Atlantogenata ANCESTRAL SPECIES 21 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00760000119441 #28 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 ENSGT00940000165702 ENSGT01090000260018.B.b ENSGT00940000163330 #37 ENSGT01090000260005.a.a.a.a ENSGT01100000263517.b.d.m.b.a.a ENSGT00940000161592 ENSGT00940000161607 Xenarthra ANCESTRAL SPECIES 368 ENSGT00950000183183.b.a #16 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000163495 #25 ENSGT00940000162347 #24 ENSGT00940000162299 #26 ENSGT00950000182890.B.b ENSGT00510000055200 #29 ENSGT00940000162113 #30 Armadillo MODERN SPECIES 1954 ENSDNOG00000035654 ENSDNOG00000005984 #16 PDAP1 (ENSDNOG00000005922) #19 BUD31 (ENSDNOG00000005929) #20 PTCD1 (ENSDNOG00000009957) #21 CPSF4 (ENSDNOG00000006344) #22 ENSDNOG00000006351 #23 ENSDNOG00000032779 ENSDNOG00000034120 ENSDNOG00000023955 ZNF789 (ENSDNOG00000045486) #25 ZNF394 (ENSDNOG00000046086) #24 ZKSCAN5 (ENSDNOG00000007054) #26 ENSDNOG00000031913 ENSDNOG00000044963 TMEM225B (ENSDNOG00000037023) #29 ZSCAN25 (ENSDNOG00000039854) #30 Afrotheria ANCESTRAL SPECIES 18 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 Tenrec MODERN SPECIES 5190 CPSF4 (ENSETEG00000002608) #22 Afrotheria_a ANCESTRAL SPECIES 65 ENSGT00940000161824 ENSGT00510000047886.a #7 ENSGT00510000048486 #8 ENSGT00940000153560.b.b.a #9 ENSGT01060000248591.a.a.a.a #10 ENSGT00950000183188.A.b #11 ENSGT00390000017961 #12 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 Elephant MODERN SPECIES 403 TECPR1 (ENSLAFG00000021861) #7 BRI3 (ENSLAFG00000031280) #8 BAIAP2L1 (ENSLAFG00000011959) #9 NPTX2 (ENSLAFG00000008442) #10 TMEM130 (ENSLAFG00000030396) #11 ENSLAFG00000027562 #12 ENSLAFG00000013536 #12 SMURF1 (ENSLAFG00000012470) #13 KPNA7 (ENSLAFG00000005116) #14 ENSLAFG00000008336 #15 ARPC1A (ENSLAFG00000014024) #16 ARPC1B (ENSLAFG00000014031) #17 PDAP1 (ENSLAFG00000014038) #19 ENSLAFG00000012201 #20 PTCD1 (ENSLAFG00000002588) #21 CPSF4 (ENSLAFG00000000159) #22 SEPTIN14 (ENSLAFG00000004021) MRPS17 (ENSLAFG00000027907) NIPSNAP2 (ENSLAFG00000010936) PSPH (ENSLAFG00000010938) CCT6A (ENSLAFG00000012791) SUMF2 (ENSLAFG00000012794) PHKG1 (ENSLAFG00000012802) ENSLAFG00000012806 VKORC1L1 (ENSLAFG00000002079) GUSB (ENSLAFG00000022591) ASL (ENSLAFG00000014828) CRCP (ENSLAFG00000027377) TPST1 (ENSLAFG00000029219) KCTD7 (ENSLAFG00000031324) RABGEF1 (ENSLAFG00000007009) Hyrax MODERN SPECIES 681 BUD31 (ENSPCAG00000001837) #20 PTCD1 (ENSPCAG00000001852) #21 CPSF4 (ENSPCAG00000001892) #22 ENSPCAG00000001942 #23 Marsupialia ANCESTRAL SPECIES 6 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.m #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.a #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000162921.m.a.b.a ENSGT00390000002761 ENSGT00390000017626 ENSGT00390000012483 ENSGT00940000159805 ENSGT00940000159038.d ENSGT00940000161794 Opossum MODERN SPECIES 5 SLC29A4 (ENSMODG00000000979) TNRC18 (ENSMODG00000000994) FBXL18 (ENSMODG00000000999) ACTB (ENSMODG00000002647) FSCN1 (ENSMODG00000001028) ENSMODG00000001052 ENSMODG00000048718 ENSMODG00000001061 SMURF1 (ENSMODG00000001079) #13 KPNA7 (ENSMODG00000001093) #14 ENSMODG00000001273 #15 ENSMODG00000001303 #16 ARPC1B (ENSMODG00000001316) #17 PDAP1 (ENSMODG00000001324) #19 PTCD1 (ENSMODG00000001350) #21 CPSF4 (ENSMODG00000001367) #22 ENSMODG00000025496 #23 ENSMODG00000001377 MAP2K3 (ENSMODG00000042585) TMEM11 (ENSMODG00000001408) DHRS7B (ENSMODG00000001421) USP22 (ENSMODG00000001435) ENSMODG00000001449 ENSMODG00000000717 QPRT (ENSMODG00000001456) ENSMODG00000024917 ENSMODG00000001453 ENSMODG00000005311 TBC1D10B (ENSMODG00000001468) MYL11 (ENSMODG00000001476) ENSMODG00000042141 Marsupialia_b ANCESTRAL SPECIES 18 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.m #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.r #20 ENSGT00390000014300.q #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.a #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000162921.m.a.b.a ENSGT00390000002761 ENSGT00390000017626 ENSGT00390000012483 ENSGT00940000159805 ENSGT00940000159038.d ENSGT00940000161794 Diprotodontia ANCESTRAL SPECIES 14 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.n #16 ENSGT00950000183183.b.a.m #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.q #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.a #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000162921.m.a.b.a ENSGT00390000002761 ENSGT00390000017626 ENSGT00390000012483 ENSGT00940000159805 ENSGT00940000159038.d ENSGT00940000161794 Wallaby MODERN SPECIES 1566 BUD31 (ENSMEUG00000006920) #20 PTCD1 (ENSMEUG00000006930) #21 CPSF4 (ENSMEUG00000006955) #22 Diprotodontia_a ANCESTRAL SPECIES 13 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b.rb ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a.n #16 ENSGT00950000183183.b.a.m #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.q #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986.a.c #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000162921.m.a.b.a ENSGT00390000002761 ENSGT00390000017626 ENSGT00390000012483 ENSGT00940000159805 ENSGT00940000159038.d ENSGT00940000161794 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1043 WIPI2 (ENSVURG00010018474) SLC29A4 (ENSVURG00010018431) TNRC18 (ENSVURG00010018350) FBXL18 (ENSVURG00010018291) ACTB (ENSVURG00010018277) FSCN1 (ENSVURG00010018267) RNF216 (ENSVURG00010018252) ENSVURG00010018242 SMURF1 (ENSVURG00010018224) #13 ENSVURG00010018191 #15 ARPC1A (ENSVURG00010018169) #16 ARPC1B (ENSVURG00010018155) #17 PDAP1 (ENSVURG00010018142) #19 BUD31 (ENSVURG00010018125) #20 PTCD1 (ENSVURG00010018118) #21 ENSVURG00010018069 #22 ENSVURG00010018064 #23 ENSVURG00010018055 MAP2K3 (ENSVURG00010018041) ENSVURG00010018034 TMEM11 (ENSVURG00010018029) DHRS7B (ENSVURG00010018024) USP22 (ENSVURG00010018016) ENSVURG00010018011 ENSVURG00010018008 QPRT (ENSVURG00010018004) ENSVURG00010018000 CD2BP2 (ENSVURG00010017994) TBC1D10B (ENSVURG00010017989) MYL11 (ENSVURG00010017983) SEPTIN1 (ENSVURG00010017973) Common wonbat MODERN SPECIES 1028 ENSVURG00010005210 ADAMTS12 (ENSVURG00010005171) ENSVURG00010005112 TARS1 (ENSVURG00010005032) NPR3 (ENSVURG00010005013) SUB1 (ENSVURG00010004948) ZFR (ENSVURG00010004881) ENSVURG00010004857 ENSVURG00010004841 MTMR12 (ENSVURG00010004789) GOLPH3 (ENSVURG00010004728) ENSVURG00010004657 ENSVURG00010004583 ENSVURG00010004574 ENSVURG00010004568 ENSVURG00010004511 #22 ENSVURG00010004456 CCBE1 (ENSVURG00010004435) LMAN1 (ENSVURG00010004400) CPLX4 (ENSVURG00010004397) ENSVURG00010004389 ENSVURG00010004372 SEC11C (ENSVURG00010004365) ZNF532 (ENSVURG00010004319) MALT1 (ENSVURG00010004098) ENSVURG00010004061 NEDD4L (ENSVURG00010003901) ENSVURG00010003773 ATP8B1 (ENSVURG00010003748) NARS1 (ENSVURG00010003689) FECH (ENSVURG00010003679) koala MODERN SPECIES 130 RADIL (ENSPCIG00000017375) MMD2 (ENSPCIG00000017376) ENSPCIG00000017383 SLC29A4 (ENSPCIG00000029062) FBXL18 (ENSPCIG00000015253) ACTB (ENSPCIG00000015244) FSCN1 (ENSPCIG00000015239) RNF216 (ENSPCIG00000032734) ENSPCIG00000019658 SMURF1 (ENSPCIG00000019659) #13 ARPC1A (ENSPCIG00000024794) #16 ARPC1B (ENSPCIG00000024786) #17 PDAP1 (ENSPCIG00000024781) #19 ENSPCIG00000024779 #20 PTCD1 (ENSPCIG00000024778) #21 CPSF4 (ENSPCIG00000024776) #22 ENSPCIG00000024775 #23 ENSPCIG00000024773 MAP2K3 (ENSPCIG00000001188) ENSPCIG00000001219 TMEM11 (ENSPCIG00000001231) DHRS7B (ENSPCIG00000001242) USP22 (ENSPCIG00000001276) ENSPCIG00000001333 ENSPCIG00000001344 QPRT (ENSPCIG00000001357) ENSPCIG00000001370 CD2BP2 (ENSPCIG00000001384) TBC1D10B (ENSPCIG00000001490) MYL11 (ENSPCIG00000001516) SEPTIN1 (ENSPCIG00000001537) Tasmanian devil MODERN SPECIES SLC29A4 (ENSSHAG00000008906) ENSSHAG00000010855 TNRC18 (ENSSHAG00000009526) FBXL18 (ENSSHAG00000012245) ACTB (ENSSHAG00000029431) FSCN1 (ENSSHAG00000003565) ENSSHAG00000005785 ENSSHAG00000027219 ENSSHAG00000008364 #13 ENSSHAG00000009967 #15 ENSSHAG00000010673 #16 ARPC1B (ENSSHAG00000030346) #17 PDAP1 (ENSSHAG00000028752) #19 BUD31 (ENSSHAG00000011349) #20 PTCD1 (ENSSHAG00000011376) #21 CPSF4 (ENSSHAG00000011533) #22 ENSSHAG00000024488 #23 ENSSHAG00000021332 MAP2K3 (ENSSHAG00000014370) NATD1 (ENSSHAG00000027545) TMEM11 (ENSSHAG00000001753) ENSSHAG00000025678 ENSSHAG00000024580 ENSSHAG00000002524 ENSSHAG00000005106 ENSSHAG00000005789 ENSSHAG00000032174 ENSSHAG00000021850 ENSSHAG00000031172 SEPTIN1 (ENSSHAG00000006478) ENSSHAG00000025018 Platypus DUPLICATION Platypus MODERN SPECIES 11 SLC29A4 (ENSOANG00000006568) TNRC18 (ENSOANG00000006567) FBXL18 (ENSOANG00000006566) ACTB (ENSOANG00000007716) FSCN1 (ENSOANG00000030243) RNF216 (ENSOANG00000007717) ENSOANG00000007718 SMURF1 (ENSOANG00000007719) #13 KPNA7 (ENSOANG00000007721) #14 ENSOANG00000007722 #15 ARPC1A (ENSOANG00000007724) #16 ARPC1B (ENSOANG00000007725) #17 PDAP1 (ENSOANG00000007726) #19 BUD31 (ENSOANG00000007727) #20 ENSOANG00000007728 #21 CPSF4 (ENSOANG00000007729) #22 ATP5MF (ENSOANG00000007730) #23 ENSOANG00000007731 MAP2K3 (ENSOANG00000007732) NATD1 (ENSOANG00000007733) TMEM11 (ENSOANG00000007734) DHRS7B (ENSOANG00000007735) USP22 (ENSOANG00000001270) ENSOANG00000001268 MPRIP (ENSOANG00000001265) PLD6 (ENSOANG00000037555) FLCN (ENSOANG00000001264) COPS3 (ENSOANG00000001262) NT5M (ENSOANG00000037852) RASD1 (ENSOANG00000037843) ENSOANG00000001259 Platypus MODERN SPECIES 6 ENSOANG00000039626 ENSOANG00000049056 ENSOANG00000040837 ENSOANG00000003289 ENSOANG00000003288 ENSOANG00000031957 GPRC5C (ENSOANG00000003287) GPR142 (ENSOANG00000003286) BTBD17 (ENSOANG00000037701) KIF19 (ENSOANG00000003284) ENSOANG00000003283 TTYH2 (ENSOANG00000003282) RPL38 (ENSOANG00000043838) SDK2 (ENSOANG00000009565) CDC42EP4 (ENSOANG00000009567) ENSOANG00000009568 #22 ENSOANG00000009569 ENSOANG00000009566 COG1 (ENSOANG00000009570) SSTR2 (ENSOANG00000004342) SLC39A11 (ENSOANG00000029590) SOX9 (ENSOANG00000005850) KCNJ2 (ENSOANG00000008077) KCNJ16 (ENSOANG00000008076) MAP2K6 (ENSOANG00000008075) ABCA5 (ENSOANG00000008073) ENSOANG00000008072 ENSOANG00000044884 ENSOANG00000047897 ENSOANG00000036044 FAM20A (ENSOANG00000008071) Sauria ANCESTRAL SPECIES 12 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Archelosauria ANCESTRAL SPECIES 12 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Cryptodira ANCESTRAL SPECIES 12 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 Testudinidae ANCESTRAL SPECIES 13 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 914 ENSCABG00000019913 KPNA7 (ENSCABG00000019903) #14 ENSCABG00000019888 #15 ARPC1A (ENSCABG00000019883) #16 ARPC1B (ENSCABG00000019881) #17 PDAP1 (ENSCABG00000019879) #19 BUD31 (ENSCABG00000019878) #20 PTCD1 (ENSCABG00000019877) #21 CPSF4 (ENSCABG00000019876) #22 ENSCABG00000019873 ENSCABG00000019871 MAP2K3 (ENSCABG00000019870) NATD1 (ENSCABG00000019869) TMEM11 (ENSCABG00000019868) DHRS7B (ENSCABG00000019866) Abingdon island giant tortoise MODERN SPECIES 1991 ENSCABG00000012991 FAAP100 (ENSCABG00000012989) NPLOC4 (ENSCABG00000011932) TSPAN10 (ENSCABG00000011902) PDE6G (ENSCABG00000011899) CCDC137 (ENSCABG00000011897) GPRC5C (ENSCABG00000011895) GPR142 (ENSCABG00000011892) BTBD17 (ENSCABG00000011881) KIF19 (ENSCABG00000011844) ENSCABG00000011837 TTYH2 (ENSCABG00000011817) RPL38 (ENSCABG00000011815) SDK2 (ENSCABG00000011804) CDC42EP4 (ENSCABG00000011799) ENSCABG00000011797 #22 C17orf80 (ENSCABG00000011795) FAM104B (ENSCABG00000011793) COG1 (ENSCABG00000011509) SSTR2 (ENSCABG00000011501) SLC39A11 (ENSCABG00000011441) SOX9 (ENSCABG00000011428) KCNJ2 (ENSCABG00000011427) KCNJ16 (ENSCABG00000011422) MAP2K6 (ENSCABG00000011411) ABCA5 (ENSCABG00000010973) ENSCABG00000010942 ENSCABG00000010935 ENSCABG00000010932 ENSCABG00000010821 ENSCABG00000010799 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 1 SLC29A4 (ENSGEVG00005007844) TNRC18 (ENSGEVG00005007897) FBXL18 (ENSGEVG00005007947) ACTB (ENSGEVG00005007981) FSCN1 (ENSGEVG00005007997) RNF216 (ENSGEVG00005008033) ENSGEVG00005008108 SMURF1 (ENSGEVG00005008131) #13 KPNA7 (ENSGEVG00005008225) #14 ENSGEVG00005008415 #15 ARPC1A (ENSGEVG00005008567) #16 ARPC1B (ENSGEVG00005008587) #17 PDAP1 (ENSGEVG00005008608) #19 BUD31 (ENSGEVG00005008621) #20 PTCD1 (ENSGEVG00005008641) #21 CPSF4 (ENSGEVG00005008657) #22 ENSGEVG00005008673 ENSGEVG00005008686 MAP2K3 (ENSGEVG00005008697) NATD1 (ENSGEVG00005008718) TMEM11 (ENSGEVG00005008733) DHRS7B (ENSGEVG00005008744) USP22 (ENSGEVG00005008766) TNFRSF13B (ENSGEVG00005008795) MPRIP (ENSGEVG00005008868) PLD6 (ENSGEVG00005009155) FLCN (ENSGEVG00005009194) COPS3 (ENSGEVG00005009243) NT5M (ENSGEVG00005009282) MED9 (ENSGEVG00005009305) RASD1 (ENSGEVG00005009324) Goode s thornscrub tortoise MODERN SPECIES 6 FAAP100 (ENSGEVG00005006954) NPLOC4 (ENSGEVG00005006868) TSPAN10 (ENSGEVG00005006706) PDE6G (ENSGEVG00005006670) OXLD1 (ENSGEVG00005006642) CCDC137 (ENSGEVG00005006627) GPRC5C (ENSGEVG00005006616) GPR142 (ENSGEVG00005006600) BTBD17 (ENSGEVG00005006577) KIF19 (ENSGEVG00005006458) ENSGEVG00005006419 TTYH2 (ENSGEVG00005006304) ENSGEVG00005006280 SDK2 (ENSGEVG00005006134) ENSGEVG00005006107 ENSGEVG00005006080 #22 C17orf80 (ENSGEVG00005006057) FAM104B (ENSGEVG00005006034) COG1 (ENSGEVG00005005847) SSTR2 (ENSGEVG00005005700) SLC39A11 (ENSGEVG00005005674) SOX9 (ENSGEVG00005005651) KCNJ2 (ENSGEVG00005005634) KCNJ16 (ENSGEVG00005005610) MAP2K6 (ENSGEVG00005005590) ABCA5 (ENSGEVG00005005505) ENSGEVG00005004952 ENSGEVG00005004463 ENSGEVG00005004315 ENSGEVG00005004295 PRKAR1A (ENSGEVG00005004268) Emydidae ANCESTRAL SPECIES 12 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 37 SLC29A4 (ENSTMTG00000014089) TNRC18 (ENSTMTG00000013974) FBXL18 (ENSTMTG00000013950) ACTB (ENSTMTG00000013939) FSCN1 (ENSTMTG00000013932) RNF216 (ENSTMTG00000013919) ENSTMTG00000013912 SMURF1 (ENSTMTG00000013503) #13 KPNA7 (ENSTMTG00000013331) #14 ENSTMTG00000013213 #15 ARPC1A (ENSTMTG00000013201) #16 ARPC1B (ENSTMTG00000013193) #17 PDAP1 (ENSTMTG00000013184) #19 BUD31 (ENSTMTG00000013181) #20 PTCD1 (ENSTMTG00000013170) #21 CPSF4 (ENSTMTG00000013163) #22 ATP5MF (ENSTMTG00000018744) #23 ENSTMTG00000018727 MAP2K3 (ENSTMTG00000018672) NATD1 (ENSTMTG00000018661) TMEM11 (ENSTMTG00000018651) DHRS7B (ENSTMTG00000018635) USP22 (ENSTMTG00000018604) TNFRSF13B (ENSTMTG00000018580) MPRIP (ENSTMTG00000018449) PLD6 (ENSTMTG00000018425) FLCN (ENSTMTG00000018397) COPS3 (ENSTMTG00000018378) NT5M (ENSTMTG00000018365) MED9 (ENSTMTG00000018356) RASD1 (ENSTMTG00000018347) Three-toed box turtle MODERN SPECIES 90 FSCN2 (ENSTMTG00000016811) ENSTMTG00000016815 NPLOC4 (ENSTMTG00000016869) TSPAN10 (ENSTMTG00000017442) PDE6G (ENSTMTG00000017647) CCDC137 (ENSTMTG00000017662) GPRC5C (ENSTMTG00000017680) GPR142 (ENSTMTG00000017687) BTBD17 (ENSTMTG00000017702) KIF19 (ENSTMTG00000017731) ENSTMTG00000017774 TTYH2 (ENSTMTG00000017873) RPL38 (ENSTMTG00000017943) SDK2 (ENSTMTG00000017996) ENSTMTG00000018493 ENSTMTG00000018507 #22 C17orf80 (ENSTMTG00000018527) FAM104B (ENSTMTG00000018538) COG1 (ENSTMTG00000018549) SSTR2 (ENSTMTG00000018568) SLC39A11 (ENSTMTG00000018579) SOX9 (ENSTMTG00000018598) KCNJ2 (ENSTMTG00000018606) KCNJ16 (ENSTMTG00000018612) MAP2K6 (ENSTMTG00000018628) ABCA5 (ENSTMTG00000018717) ENSTMTG00000019664 ENSTMTG00000021803 ENSTMTG00000022644 FAM20A (ENSTMTG00000022656) ENSTMTG00000003014 painted turtle DUPLICATION painted turtle MODERN SPECIES 2421 SLC29A4 (ENSCPBG00000020775) TNRC18 (ENSCPBG00000020786) FBXL18 (ENSCPBG00000020806) ACTB (ENSCPBG00000020809) FSCN1 (ENSCPBG00000020810) RNF216 (ENSCPBG00000020812) ENSCPBG00000020819 SMURF1 (ENSCPBG00000020821) #13 KPNA7 (ENSCPBG00000020833) #14 ENSCPBG00000020844 #15 ARPC1A (ENSCPBG00000020854) #16 ARPC1B (ENSCPBG00000020858) #17 PDAP1 (ENSCPBG00000020862) #19 BUD31 (ENSCPBG00000020864) #20 PTCD1 (ENSCPBG00000020866) #21 CPSF4 (ENSCPBG00000020869) #22 ATP5MF (ENSCPBG00000020871) #23 MAP2K3 (ENSCPBG00000020879) NATD1 (ENSCPBG00000020883) TMEM11 (ENSCPBG00000020885) DHRS7B (ENSCPBG00000020886) USP22 (ENSCPBG00000020888) TNFRSF13B (ENSCPBG00000020890) MPRIP (ENSCPBG00000020895) PLD6 (ENSCPBG00000020910) FLCN (ENSCPBG00000020915) COPS3 (ENSCPBG00000020918) NT5M (ENSCPBG00000020919) MED9 (ENSCPBG00000020921) RASD1 (ENSCPBG00000020922) PEMT (ENSCPBG00000020924) painted turtle MODERN SPECIES 696 ENSCPBG00000010394 NPLOC4 (ENSCPBG00000010388) TSPAN10 (ENSCPBG00000010385) PDE6G (ENSCPBG00000010382) OXLD1 (ENSCPBG00000010380) CCDC137 (ENSCPBG00000010378) GPRC5C (ENSCPBG00000010371) GPR142 (ENSCPBG00000010367) BTBD17 (ENSCPBG00000010366) KIF19 (ENSCPBG00000010319) ENSCPBG00000010302 TTYH2 (ENSCPBG00000010298) RPL38 (ENSCPBG00000010293) SDK2 (ENSCPBG00000010273) ENSCPBG00000010270 ENSCPBG00000010269 #22 C17orf80 (ENSCPBG00000010266) FAM104B (ENSCPBG00000010265) COG1 (ENSCPBG00000010264) SSTR2 (ENSCPBG00000010261) SLC39A11 (ENSCPBG00000010245) SOX9 (ENSCPBG00000010236) KCNJ2 (ENSCPBG00000010228) KCNJ16 (ENSCPBG00000010225) ENSCPBG00000010221 MAP2K6 (ENSCPBG00000010219) ABCA5 (ENSCPBG00000010213) ENSCPBG00000010012 ENSCPBG00000009816 ENSCPBG00000009734 ENSCPBG00000009728 Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 264 MMD2 (ENSPSIG00000010464) WIPI2 (ENSPSIG00000010520) SLC29A4 (ENSPSIG00000010626) TNRC18 (ENSPSIG00000010641) FBXL18 (ENSPSIG00000010848) ACTB (ENSPSIG00000010875) FSCN1 (ENSPSIG00000010881) RNF216 (ENSPSIG00000010937) ENSPSIG00000001738 SMURF1 (ENSPSIG00000010953) #13 ENSPSIG00000010963 #15 ARPC1A (ENSPSIG00000011034) #16 PDAP1 (ENSPSIG00000011087) #19 BUD31 (ENSPSIG00000011153) #20 PTCD1 (ENSPSIG00000011184) #21 CPSF4 (ENSPSIG00000011229) #22 ATP5MF (ENSPSIG00000011253) #23 ENSPSIG00000001742 MAP2K3 (ENSPSIG00000011264) Chinese turtle MODERN SPECIES 764 CDC42EP4 (ENSPSIG00000003678) ENSPSIG00000018198 #22 C17orf80 (ENSPSIG00000018196) FAM104B (ENSPSIG00000018194) COG1 (ENSPSIG00000018184) SSTR2 (ENSPSIG00000000013) ENSPSIG00000018182 SH3GLB2 (ENSPSIG00000018168) NUP188 (ENSPSIG00000018163) DOLK (ENSPSIG00000000012) PHYHD1 (ENSPSIG00000018156) LRRC8A (ENSPSIG00000000011) KYAT1 (ENSPSIG00000018153) SPOUT1 (ENSPSIG00000018152) ENDOG (ENSPSIG00000018149) TBC1D13 (ENSPSIG00000018124) ZER1 (ENSPSIG00000018118) Archosauria ANCESTRAL SPECIES 8 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 46 WIPI2 (ENSCPRG00005016270) SLC29A4 (ENSCPRG00005016263) FBXL18 (ENSCPRG00005016208) ACTB (ENSCPRG00005016203) FSCN1 (ENSCPRG00005016199) RNF216 (ENSCPRG00005016190) ENSCPRG00005016185 SMURF1 (ENSCPRG00005016127) #13 KPNA7 (ENSCPRG00005016120) #14 ENSCPRG00005016109 #15 ARPC1A (ENSCPRG00005016070) #16 ARPC1B (ENSCPRG00005016064) #17 PDAP1 (ENSCPRG00005016062) #19 BUD31 (ENSCPRG00005016057) #20 PTCD1 (ENSCPRG00005016054) #21 CPSF4 (ENSCPRG00005016053) #22 ATP5MF (ENSCPRG00005016051) #23 ENSCPRG00005016049 MAP2K3 (ENSCPRG00005016043) NATD1 (ENSCPRG00005016042) TMEM11 (ENSCPRG00005016040) DHRS7B (ENSCPRG00005016037) USP22 (ENSCPRG00005016028) TNFRSF13B (ENSCPRG00005016024) MPRIP (ENSCPRG00005016012) PLD6 (ENSCPRG00005016009) FLCN (ENSCPRG00005016006) COPS3 (ENSCPRG00005016001) NT5M (ENSCPRG00005015997) MED9 (ENSCPRG00005015995) RASD1 (ENSCPRG00005015994) Australian saltwater crocodile MODERN SPECIES 47 FAAP100 (ENSCPRG00005018387) NPLOC4 (ENSCPRG00005018390) TSPAN10 (ENSCPRG00005018392) PDE6G (ENSCPRG00005018393) ENSCPRG00005018396 CCDC137 (ENSCPRG00005018398) GPRC5C (ENSCPRG00005018401) GPR142 (ENSCPRG00005018403) BTBD17 (ENSCPRG00005018405) KIF19 (ENSCPRG00005018407) DNAI2 (ENSCPRG00005018412) TTYH2 (ENSCPRG00005018414) RPL38 (ENSCPRG00005018419) SDK2 (ENSCPRG00005018431) CDC42EP4 (ENSCPRG00005018467) ENSCPRG00005018469 #22 ENSCPRG00005018472 FAM104B (ENSCPRG00005018474) COG1 (ENSCPRG00005018477) SSTR2 (ENSCPRG00005018484) SLC39A11 (ENSCPRG00005018486) SOX9 (ENSCPRG00005018493) KCNJ2 (ENSCPRG00005018497) KCNJ16 (ENSCPRG00005018499) MAP2K6 (ENSCPRG00005018500) ABCA5 (ENSCPRG00005018505) ENSCPRG00005018528 ENSCPRG00005018540 ENSCPRG00005018543 ENSCPRG00005018545 FAM20A (ENSCPRG00005018549) Aves ANCESTRAL SPECIES 11 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 African ostrich DUPLICATION African ostrich MODERN SPECIES 989 RNF216 (ENSSCUG00000018343) ENSSCUG00000018342 SMURF1 (ENSSCUG00000018341) #13 KPNA7 (ENSSCUG00000018339) #14 ENSSCUG00000018338 ARPC1A (ENSSCUG00000018336) #16 PDAP1 (ENSSCUG00000018335) #19 BUD31 (ENSSCUG00000018334) #20 PTCD1 (ENSSCUG00000018329) #21 CPSF4 (ENSSCUG00000018325) #22 ATP5MF (ENSSCUG00000018324) #23 ENSSCUG00000018322 MAP2K3 (ENSSCUG00000018318) NATD1 (ENSSCUG00000018315) TMEM11 (ENSSCUG00000018314) DHRS7B (ENSSCUG00000018313) USP22 (ENSSCUG00000018311) MPRIP (ENSSCUG00000018303) FLCN (ENSSCUG00000018296) COPS3 (ENSSCUG00000018292) MED9 (ENSSCUG00000018286) RASD1 (ENSSCUG00000018285) PEMT (ENSSCUG00000018283) African ostrich MODERN SPECIES 130 ENSSCUG00000001749 #22 ENSSCUG00000001746 FAM104B (ENSSCUG00000001744) COG1 (ENSSCUG00000001718) SSTR2 (ENSSCUG00000001703) SLC39A11 (ENSSCUG00000001699) Neognathae ANCESTRAL SPECIES 10 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Galloanserae ANCESTRAL SPECIES 9 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Phasianidae ANCESTRAL SPECIES 10 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032.a ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Japanese quail MODERN SPECIES 5 SLC29A4 (ENSCJPG00005000281) TNRC18 (ENSCJPG00005000297) FBXL18 (ENSCJPG00005000327) ACTB (ENSCJPG00005000336) FSCN1 (ENSCJPG00005000395) RNF216 (ENSCJPG00005000414) ENSCJPG00005001323 SMURF1 (ENSCJPG00005001326) #13 ENSCJPG00005001328 KPNA7 (ENSCJPG00005001331) #14 ARPC1A (ENSCJPG00005001335) #16 ARPC1B (ENSCJPG00005001338) #17 PDAP1 (ENSCJPG00005001340) #19 BUD31 (ENSCJPG00005001343) #20 PTCD1 (ENSCJPG00005001347) #21 CPSF4 (ENSCJPG00005001353) #22 ATP5MF (ENSCJPG00005001357) #23 ENSCJPG00005001360 MAP2K3 (ENSCJPG00005001368) NATD1 (ENSCJPG00005001379) TMEM11 (ENSCJPG00005001383) DHRS7B (ENSCJPG00005001385) USP22 (ENSCJPG00005001392) TNFRSF13B (ENSCJPG00005001394) MPRIP (ENSCJPG00005001400) PLD6 (ENSCJPG00005001422) FLCN (ENSCJPG00005001424) COPS3 (ENSCJPG00005001436) NT5M (ENSCJPG00005001447) MED9 (ENSCJPG00005001452) RASD1 (ENSCJPG00005001458) Phasianidae_b ANCESTRAL SPECIES 10 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032.a ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Turkey MODERN SPECIES 7 ENSMGAG00000004443 NT5M (ENSMGAG00000004438) ENSMGAG00000019719 ENSMGAG00000004388 FLCN (ENSMGAG00000004370) ENSMGAG00000004302 ENSMGAG00000004369 ENSMGAG00000019138 ENSMGAG00000004299 TNFRSF13B (ENSMGAG00000004358) ENSMGAG00000015545 ENSMGAG00000004263 NATD1 (ENSMGAG00000004258) ENSMGAG00000004264 ENSMGAG00000015541 CPSF4 (ENSMGAG00000004235) #22 ENSMGAG00000018852 #23 BUD31 (ENSMGAG00000004195) #20 ENSMGAG00000004211 #21 ENSMGAG00000004113 #16 ENSMGAG00000004152 #17 PDAP1 (ENSMGAG00000004176) #19 KPNA7 (ENSMGAG00000004051) #14 ENSMGAG00000021321 ENSMGAG00000003976 ENSMGAG00000003983 #13 ENSMGAG00000003930 ENSMGAG00000016921 ENSMGAG00000003905 ENSMGAG00000018626 ENSMGAG00000003960 Chicken DUPLICATION Chicken MODERN SPECIES 5 WIPI2 (ENSGALG00010021162) SLC29A4 (ENSGALG00010021172) TNRC18 (ENSGALG00010021188) FBXL18 (ENSGALG00010021214) ACTB (ENSGALG00010021232) FSCN1 (ENSGALG00010021237) RNF216 (ENSGALG00010021251) ENSGALG00010021271 SMURF1 (ENSGALG00010021301) #13 KPNA7 (ENSGALG00010021313) #14 ARPC1A (ENSGALG00010021325) #16 ARPC1B (ENSGALG00010021362) #17 PDAP1 (ENSGALG00010021401) #19 BUD31 (ENSGALG00010021414) #20 PTCD1 (ENSGALG00010021424) #21 CPSF4 (ENSGALG00010021431) #22 ATP5J2 (ENSGALG00010021454) #23 KCNJ12 (ENSGALG00010021526) MAP2K3 (ENSGALG00010021550) NATD1 (ENSGALG00010021573) TMEM11 (ENSGALG00010021610) DHRS7B (ENSGALG00010021629) USP22 (ENSGALG00010021655) TNFRSF13B (ENSGALG00010021671) MPRIP (ENSGALG00010021689) PLD6 (ENSGALG00010021702) FLCN (ENSGALG00010021700) COPS3 (ENSGALG00010021723) NT5M (ENSGALG00010017495) MED9 (ENSGALG00010017503) RASD1 (ENSGALG00010017509) Chicken MODERN SPECIES 9 TSPAN10 (ENSGALG00010029512) PDE6G (ENSGALG00010029510) ENSGALG00010029508 OXLD1 (ENSGALG00010029506) GPRC5C (ENSGALG00010030106) GPR142 (ENSGALG00010029504) BTBD17 (ENSGALG00010029502) KIF19 (ENSGALG00010029499) DNAI2 (ENSGALG00010029497) TTYH2 (ENSGALG00010029496) RPL38 (ENSGALG00010029495) ENSGALG00010029493 SDK2 (ENSGALG00010029492) ENSGALG00010029488 CDC42EP4 (ENSGALG00010029487) ENSGALG00010029483 #22 ENSGALG00010029480 FAM104A (ENSGALG00010029477) COG1 (ENSGALG00010029473) SSTR2 (ENSGALG00010029470) SLC39A11 (ENSGALG00010029466) SOX9 (ENSGALG00010029771) KCNJ2 (ENSGALG00010029768) KCNJ16 (ENSGALG00010029765) MAP2K6 (ENSGALG00010029424) ABCA5 (ENSGALG00010029418) ENSGALG00010029417 ENSGALG00010029409 FAM20A (ENSGALG00010029403) PRKAR1A (ENSGALG00010029399) WIPI1 (ENSGALG00010029396) Anatidae ANCESTRAL SPECIES 7 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Duck MODERN SPECIES 6 AP5Z1 (ENSAPLG00000009165) ENSAPLG00000026450 WIPI2 (ENSAPLG00000009715) SLC29A4 (ENSAPLG00000010012) TNRC18 (ENSAPLG00000028315) FBXL18 (ENSAPLG00000010121) ACTB (ENSAPLG00000010147) RNF216 (ENSAPLG00000010364) SMURF1 (ENSAPLG00000010476) #13 KPNA7 (ENSAPLG00000010767) #14 ARPC1A (ENSAPLG00000011059) #16 ARPC1B (ENSAPLG00000020035) #17 PDAP1 (ENSAPLG00000006542) #19 BUD31 (ENSAPLG00000006748) #20 PTCD1 (ENSAPLG00000006862) #21 CPSF4 (ENSAPLG00000018571) #22 ATP5MF (ENSAPLG00000007021) #23 ENSAPLG00000027874 ENSAPLG00000026453 NATD1 (ENSAPLG00000007590) TMEM11 (ENSAPLG00000028416) DHRS7B (ENSAPLG00000007599) USP22 (ENSAPLG00000002524) TNFRSF13B (ENSAPLG00000021324) MPRIP (ENSAPLG00000030840) PLD6 (ENSAPLG00000004112) FLCN (ENSAPLG00000004124) COPS3 (ENSAPLG00000004443) NT5M (ENSAPLG00000008923) ENSAPLG00000021768 ENSAPLG00000018961 Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 59 MMD2 (ENSABRG00000002148) WIPI2 (ENSABRG00000002125) SLC29A4 (ENSABRG00000002112) TNRC18 (ENSABRG00000002069) FBXL18 (ENSABRG00000002032) ACTB (ENSABRG00000002004) ENSABRG00000001980 RNF216 (ENSABRG00000001919) SMURF1 (ENSABRG00000001864) #13 KPNA7 (ENSABRG00000001828) #14 ARPC1A (ENSABRG00000001764) #16 ARPC1B (ENSABRG00000001702) #17 PDAP1 (ENSABRG00000001687) #19 BUD31 (ENSABRG00000001589) #20 PTCD1 (ENSABRG00000001568) #21 CPSF4 (ENSABRG00000001549) #22 ATP5MF (ENSABRG00000001534) #23 ENSABRG00000001514 MAP2K3 (ENSABRG00000001410) NATD1 (ENSABRG00000001319) TMEM11 (ENSABRG00000001303) DHRS7B (ENSABRG00000001258) USP22 (ENSABRG00000001162) TNFRSF13B (ENSABRG00000001137) MPRIP (ENSABRG00000000875) PLD6 (ENSABRG00000000855) FLCN (ENSABRG00000000811) COPS3 (ENSABRG00000015617) NT5M (ENSABRG00000015611) MED9 (ENSABRG00000015607) RASD1 (ENSABRG00000015604) Pink-footed goose MODERN SPECIES 241 FSCN2 (ENSABRG00000010882) FAAP100 (ENSABRG00000010878) NPLOC4 (ENSABRG00000010875) TSPAN10 (ENSABRG00000010872) PDE6G (ENSABRG00000010862) OXLD1 (ENSABRG00000010853) CCDC137 (ENSABRG00000010844) GPR142 (ENSABRG00000010838) BTBD17 (ENSABRG00000010831) GPRC5C (ENSABRG00000010821) ENSABRG00000010807 DNAI2 (ENSABRG00000010786) TTYH2 (ENSABRG00000010771) RPL38 (ENSABRG00000010762) ENSABRG00000010613 ENSABRG00000010605 #22 ENSABRG00000010602 FAM104B (ENSABRG00000010593) COG1 (ENSABRG00000010561) SSTR2 (ENSABRG00000010556) SLC39A11 (ENSABRG00000010549) SOX9 (ENSABRG00000010533) Neognathae_b ANCESTRAL SPECIES 12 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Neognathae_c ANCESTRAL SPECIES 14 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Kakapo MODERN SPECIES 21 WIPI2 (ENSSHBG00005009312) SLC29A4 (ENSSHBG00005009331) TNRC18 (ENSSHBG00005009360) FBXL18 (ENSSHBG00005009478) ACTB (ENSSHBG00005009495) FSCN1 (ENSSHBG00005009511) RNF216 (ENSSHBG00005009526) ENSSHBG00005009548 SMURF1 (ENSSHBG00005009565) #13 KPNA7 (ENSSHBG00005009584) #14 ARPC1A (ENSSHBG00005009628) #16 ARPC1B (ENSSHBG00005009647) #17 PDAP1 (ENSSHBG00005009661) #19 BUD31 (ENSSHBG00005009702) #20 PTCD1 (ENSSHBG00005009712) #21 CPSF4 (ENSSHBG00005009724) #22 ATP5MF (ENSSHBG00005009739) #23 ENSSHBG00005009753 MAP2K3 (ENSSHBG00005009760) NATD1 (ENSSHBG00005009769) TMEM11 (ENSSHBG00005009779) DHRS7B (ENSSHBG00005009791) USP22 (ENSSHBG00005009835) TNFRSF13B (ENSSHBG00005009892) MPRIP (ENSSHBG00005009910) PLD6 (ENSSHBG00005009927) FLCN (ENSSHBG00005009939) COPS3 (ENSSHBG00005009970) NT5M (ENSSHBG00005009999) MED9 (ENSSHBG00005010021) RASD1 (ENSSHBG00005010032) Golden eagle MODERN SPECIES 17 WIPI2 (ENSACCG00020013177) SLC29A4 (ENSACCG00020013147) TNRC18 (ENSACCG00020013096) FBXL18 (ENSACCG00020013037) ACTB (ENSACCG00020013020) FSCN1 (ENSACCG00020012998) RNF216 (ENSACCG00020012969) ENSACCG00020012955 SMURF1 (ENSACCG00020012938) #13 KPNA7 (ENSACCG00020012868) #14 ARPC1A (ENSACCG00020012791) #16 ARPC1B (ENSACCG00020012730) #17 PDAP1 (ENSACCG00020012701) #19 BUD31 (ENSACCG00020012680) #20 PTCD1 (ENSACCG00020012652) #21 CPSF4 (ENSACCG00020012629) #22 ATP5MF (ENSACCG00020012613) #23 ENSACCG00020012599 MAP2K3 (ENSACCG00020012553) NATD1 (ENSACCG00020012513) TMEM11 (ENSACCG00020012496) DHRS7B (ENSACCG00020012388) USP22 (ENSACCG00020012331) TNFRSF13B (ENSACCG00020012289) MPRIP (ENSACCG00020012175) PLD6 (ENSACCG00020012032) FLCN (ENSACCG00020011997) COPS3 (ENSACCG00020011957) NT5M (ENSACCG00020011921) MED9 (ENSACCG00020011908) RASD1 (ENSACCG00020011882) Passeriformes ANCESTRAL SPECIES 11 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.o #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 Great tit DUPLICATION Great tit MODERN SPECIES 5 MMD2 (ENSPMJG00000017393) WIPI2 (ENSPMJG00000017394) SLC29A4 (ENSPMJG00000017395) TNRC18 (ENSPMJG00000017396) FBXL18 (ENSPMJG00000017399) ACTB (ENSPMJG00000017400) FSCN1 (ENSPMJG00000017401) RNF216 (ENSPMJG00000017402) SMURF1 (ENSPMJG00000017403) #13 KPNA7 (ENSPMJG00000017404) #14 ARPC1A (ENSPMJG00000017406) #16 ARPC1B (ENSPMJG00000017407) #17 PDAP1 (ENSPMJG00000017408) #19 BUD31 (ENSPMJG00000017409) #20 PTCD1 (ENSPMJG00000017410) #21 CPSF4 (ENSPMJG00000017411) #22 ATP5MF (ENSPMJG00000017412) #23 ENSPMJG00000017413 MAP2K3 (ENSPMJG00000017414) NATD1 (ENSPMJG00000017415) ENSPMJG00000017416 ENSPMJG00000017417 DHRS7B (ENSPMJG00000017419) USP22 (ENSPMJG00000017420) TNFRSF13B (ENSPMJG00000017421) MPRIP (ENSPMJG00000017422) FLCN (ENSPMJG00000017423) COPS3 (ENSPMJG00000017424) NT5M (ENSPMJG00000017425) MED9 (ENSPMJG00000017426) RASD1 (ENSPMJG00000017427) Great tit MODERN SPECIES 8 ACTG1 (ENSPMJG00000017037) FSCN2 (ENSPMJG00000017038) FAAP100 (ENSPMJG00000017039) ENSPMJG00000017040 NPLOC4 (ENSPMJG00000017041) TSPAN10 (ENSPMJG00000017042) OXLD1 (ENSPMJG00000017043) CCDC137 (ENSPMJG00000017044) GPRC5C (ENSPMJG00000017045) BTBD17 (ENSPMJG00000017046) GPR142 (ENSPMJG00000017047) ENSPMJG00000017048 TTYH2 (ENSPMJG00000017049) RPL38 (ENSPMJG00000017050) ENSPMJG00000017052 ENSPMJG00000017053 #22 ENSPMJG00000017054 FAM104B (ENSPMJG00000017055) COG1 (ENSPMJG00000017056) SSTR2 (ENSPMJG00000017057) SLC39A11 (ENSPMJG00000017058) SOX9 (ENSPMJG00000017065) KCNJ2 (ENSPMJG00000017073) KCNJ16 (ENSPMJG00000017075) MAP2K6 (ENSPMJG00000017080) ENSPMJG00000017081 ABCA5 (ENSPMJG00000017082) ENSPMJG00000017083 ENSPMJG00000017088 FAM20A (ENSPMJG00000017092) PRKAR1A (ENSPMJG00000017112) Passeriformes_d ANCESTRAL SPECIES 11 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.o #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 Flycatcher DUPLICATION Flycatcher MODERN SPECIES 5 MMD2 (ENSFALG00000013836) WIPI2 (ENSFALG00000028204) SLC29A4 (ENSFALG00000013831) TNRC18 (ENSFALG00000013830) FBXL18 (ENSFALG00000013829) ACTB (ENSFALG00000013828) FSCN1 (ENSFALG00000013827) RNF216 (ENSFALG00000013825) ENSFALG00000014244 SMURF1 (ENSFALG00000013824) #13 KPNA7 (ENSFALG00000013820) #14 ARPC1A (ENSFALG00000013815) #16 PDAP1 (ENSFALG00000025682) #19 ENSFALG00000013804 #20 PTCD1 (ENSFALG00000013803) #21 CPSF4 (ENSFALG00000024016) #22 ATP5MF (ENSFALG00000013801) #23 KCNJ12 (ENSFALG00000027206) MAP2K3 (ENSFALG00000013796) NATD1 (ENSFALG00000023203) TMEM11 (ENSFALG00000014240) DHRS7B (ENSFALG00000013793) USP22 (ENSFALG00000013792) TNFRSF13B (ENSFALG00000027584) MPRIP (ENSFALG00000013790) PLD6 (ENSFALG00000027587) FLCN (ENSFALG00000013783) COPS3 (ENSFALG00000028737) NT5M (ENSFALG00000013779) ENSFALG00000026952 RASD1 (ENSFALG00000013776) Flycatcher MODERN SPECIES 8 FSCN2 (ENSFALG00000012651) FAAP100 (ENSFALG00000012667) ENSFALG00000028648 NPLOC4 (ENSFALG00000012683) TSPAN10 (ENSFALG00000012693) PDE6G (ENSFALG00000023175) CCDC137 (ENSFALG00000012722) GPRC5C (ENSFALG00000024995) GPR142 (ENSFALG00000012741) BTBD17 (ENSFALG00000012748) ENSFALG00000012762 TTYH2 (ENSFALG00000012787) RPL38 (ENSFALG00000023195) SDK2 (ENSFALG00000012827) ENSFALG00000026539 ENSFALG00000012906 #22 ENSFALG00000023260 ENSFALG00000012889 COG1 (ENSFALG00000012923) SSTR2 (ENSFALG00000015032) ENSFALG00000024962 ENSFALG00000024870 ENSFALG00000027042 ENSFALG00000028916 SOX9 (ENSFALG00000002572) ENSFALG00000015208 MAP2K6 (ENSFALG00000002554) ABCA5 (ENSFALG00000002529) ENSFALG00000025138 ENSFALG00000002521 ENSFALG00000002512 Passeriformes_g ANCESTRAL SPECIES 12 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.o #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Medium ground finch DUPLICATION Medium ground finch MODERN SPECIES 22 RADIL (ENSGFOG00000009439) MMD2 (ENSGFOG00000009429) WIPI2 (ENSGFOG00000009409) SLC29A4 (ENSGFOG00000009402) FBXL18 (ENSGFOG00000009340) ENSGFOG00000009329 FSCN1 (ENSGFOG00000009318) RNF216 (ENSGFOG00000009308) SMURF1 (ENSGFOG00000008634) #13 KPNA7 (ENSGFOG00000008572) #14 ARPC1B (ENSGFOG00000008561) #17 ARPC1A (ENSGFOG00000008549) #16 PDAP1 (ENSGFOG00000008542) #19 ENSGFOG00000008538 #20 PTCD1 (ENSGFOG00000008525) #21 CPSF4 (ENSGFOG00000008516) #22 ENSGFOG00000008510 ENSGFOG00000008509 MAP2K3 (ENSGFOG00000008502) NATD1 (ENSGFOG00000008499) TMEM11 (ENSGFOG00000008494) Medium ground finch MODERN SPECIES 339 ENSGFOG00000005551 FAAP100 (ENSGFOG00000005538) NPLOC4 (ENSGFOG00000005530) TSPAN10 (ENSGFOG00000005524) PDE6G (ENSGFOG00000005519) CCDC137 (ENSGFOG00000005514) ENSGFOG00000005505 BTBD17 (ENSGFOG00000005497) ENSGFOG00000005260 RPL38 (ENSGFOG00000005216) ENSGFOG00000005091 #22 ENSGFOG00000005087 ENSGFOG00000005081 COG1 (ENSGFOG00000004968) SSTR2 (ENSGFOG00000004957) ENSGFOG00000004950 ENSGFOG00000004943 SLC39A11 (ENSGFOG00000004940) Passeroidea ANCESTRAL SPECIES 11 ENSGT00940000157972 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300.o #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT00390000001055 ENSGT00510000046986 #23 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a Common canary MODERN SPECIES 17 MMD2 (ENSSCAG00000009114) WIPI2 (ENSSCAG00000009100) SLC29A4 (ENSSCAG00000009090) ENSSCAG00000009080 FBXL18 (ENSSCAG00000009067) ACTB (ENSSCAG00000009060) FSCN1 (ENSSCAG00000009055) RNF216 (ENSSCAG00000009048) SMURF1 (ENSSCAG00000009043) #13 KPNA7 (ENSSCAG00000009027) #14 ARPC1A (ENSSCAG00000009009) #16 ARPC1B (ENSSCAG00000009006) #17 PDAP1 (ENSSCAG00000008999) #19 ENSSCAG00000008991 #20 PTCD1 (ENSSCAG00000008968) #21 CPSF4 (ENSSCAG00000008956) #22 ENSSCAG00000008947 ENSSCAG00000008942 MAP2K3 (ENSSCAG00000008937) NATD1 (ENSSCAG00000008931) TMEM11 (ENSSCAG00000008929) DHRS7B (ENSSCAG00000008923) USP22 (ENSSCAG00000008918) TNFRSF13B (ENSSCAG00000008915) MPRIP (ENSSCAG00000008877) FLCN (ENSSCAG00000008865) COPS3 (ENSSCAG00000008862) NT5M (ENSSCAG00000008856) MED9 (ENSSCAG00000008853) RASD1 (ENSSCAG00000008850) PEMT (ENSSCAG00000008844) Zebra finch DUPLICATION Zebra finch MODERN SPECIES 5 RADIL (ENSTGUG00000007743) MMD2 (ENSTGUG00000029335) WIPI2 (ENSTGUG00000007704) SLC29A4 (ENSTGUG00000007691) TNRC18 (ENSTGUG00000007679) FBXL18 (ENSTGUG00000007676) ACTB (ENSTGUG00000004138) FSCN1 (ENSTGUG00000007668) RNF216 (ENSTGUG00000007658) SMURF1 (ENSTGUG00000007637) #13 KPNA7 (ENSTGUG00000007626) #14 ARPC1B (ENSTGUG00000007594) #17 PDAP1 (ENSTGUG00000007588) #19 BUD31 (ENSTGUG00000007584) #20 PTCD1 (ENSTGUG00000007563) #21 CPSF4 (ENSTGUG00000007552) #22 ATP5MF (ENSTGUG00000027774) #23 ENSTGUG00000029126 MAP2K3 (ENSTGUG00000007502) TMEM11 (ENSTGUG00000007500) DHRS7B (ENSTGUG00000007489) USP22 (ENSTGUG00000007455) TNFRSF13B (ENSTGUG00000007454) MPRIP (ENSTGUG00000007423) PLD6 (ENSTGUG00000025415) FLCN (ENSTGUG00000007415) COPS3 (ENSTGUG00000007378) NT5M (ENSTGUG00000027577) MED9 (ENSTGUG00000028820) RASD1 (ENSTGUG00000007363) RAI1 (ENSTGUG00000022081) Zebra finch MODERN SPECIES 9 BAHCC1 (ENSTGUG00000019540) ACTG1 (ENSTGUG00000023431) FSCN2 (ENSTGUG00000014701) FAAP100 (ENSTGUG00000017013) NPLOC4 (ENSTGUG00000002958) TSPAN10 (ENSTGUG00000002947) PDE6G (ENSTGUG00000023137) CCDC137 (ENSTGUG00000002950) GPRC5C (ENSTGUG00000002949) GPR142 (ENSTGUG00000027421) BTBD17 (ENSTGUG00000002937) ENSTGUG00000021226 TTYH2 (ENSTGUG00000002939) RPL38 (ENSTGUG00000028267) CDC42EP4 (ENSTGUG00000022526) ENSTGUG00000022100 #22 ENSTGUG00000002918 ENSTGUG00000019625 FAM104B (ENSTGUG00000002914) COG1 (ENSTGUG00000002888) SSTR2 (ENSTGUG00000025850) SLC39A11 (ENSTGUG00000002885) SOX9 (ENSTGUG00000002882) KCNJ2 (ENSTGUG00000002878) KCNJ16 (ENSTGUG00000023170) MAP2K6 (ENSTGUG00000027718) Lepidosauria ANCESTRAL SPECIES 22 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000155286 ENSGT00390000004368 ENSGT00390000009864 ENSGT00940000153653.a.b.a.b ENSGT00390000011596.a ENSGT00390000017379 ENSGT00940000161274 Episquamata ANCESTRAL SPECIES 8 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000167116 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 ENSGT00940000155830 ENSGT00390000005666 ENSGT00940000157513 Laterata ANCESTRAL SPECIES 22 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT00940000156819.a.b ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000167116 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 ENSGT00940000155830 ENSGT00390000005666 ENSGT00940000157513 Common wall lizard MODERN SPECIES 5 BFAR (ENSPMRG00000023027) ENSPMRG00000023022 CLCN7 (ENSPMRG00000023016) ENSPMRG00000023011 PARN (ENSPMRG00000023002) ENSPMRG00000022996 ECI1 (ENSPMRG00000022991) ENSPMRG00000022975 #14 ENSPMRG00000022958 #14 ENSPMRG00000022939 #15 ENSPMRG00000022932 #16 ARPC1B (ENSPMRG00000022924) #17 PDAP1 (ENSPMRG00000022918) #19 BUD31 (ENSPMRG00000022912) #20 PTCD1 (ENSPMRG00000022910) #21 CPSF4 (ENSPMRG00000022904) #22 ENSPMRG00000022899 ENSPMRG00000022896 MAP2K3 (ENSPMRG00000022885) ENSPMRG00000022881 ENSPMRG00000022878 TMEM11 (ENSPMRG00000022875) DHRS7B (ENSPMRG00000022868) USP22 (ENSPMRG00000022858) ENSPMRG00000022852 ENSPMRG00000022841 EEF2K (ENSPMRG00000022835) POLR3E (ENSPMRG00000022828) CDR2 (ENSPMRG00000022824) ENSPMRG00000022821 IGSF6 (ENSPMRG00000022817) Argentine black and white tegu MODERN SPECIES 103 SLC29A4 (ENSSMRG00000020264) TNRC18 (ENSSMRG00000020258) FBXL18 (ENSSMRG00000020254) ACTB (ENSSMRG00000020253) FSCN1 (ENSSMRG00000020250) RNF216 (ENSSMRG00000020248) ENSSMRG00000020246 SMURF1 (ENSSMRG00000020244) #13 KPNA7 (ENSSMRG00000020136) #14 ENSSMRG00000020128 #15 ARPC1A (ENSSMRG00000020127) #16 ARPC1B (ENSSMRG00000020124) #17 PDAP1 (ENSSMRG00000020122) #19 BUD31 (ENSSMRG00000020120) #20 PTCD1 (ENSSMRG00000020118) #21 CPSF4 (ENSSMRG00000020117) #22 ENSSMRG00000020116 ENSSMRG00000020115 MAP2K3 (ENSSMRG00000020114) NATD1 (ENSSMRG00000020113) TMEM11 (ENSSMRG00000020112) DHRS7B (ENSSMRG00000020111) USP22 (ENSSMRG00000020110) ENSSMRG00000020109 ENSSMRG00000020107 COX19 (ENSSMRG00000020106) Toxicofera ANCESTRAL SPECIES 14 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b ENSGT00510000048032 ENSGT01030000234534.C ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875 ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000167116 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 ENSGT00940000155830 ENSGT00390000005666 ENSGT00940000157513 Elapidae ANCESTRAL SPECIES 1 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b.cb ENSGT00950000183157.a.a.b.bb ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875.a ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000167116 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 ENSGT00940000155830 ENSGT00390000005666 ENSGT00940000157513 Elapidae_a ANCESTRAL SPECIES 3 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b.cb ENSGT00950000183157.a.a.b.bb ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875.a ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000167116 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 ENSGT00940000155830 ENSGT00390000005666 ENSGT00940000157513 Acanthophiinae ANCESTRAL SPECIES 2 ENSGT00940000155537 ENSGT00950000182898.a.b ENSGT00940000157099 ENSGT00390000015109 ENSGT00950000182960.a.a.a.a.b ENSGT00950000183157.a.a.b.cb ENSGT00950000183157.a.a.b.bb ENSGT00510000048032 ENSGT00940000158690 #13 ENSGT01050000244891.B #14 ENSGT00940000160705.C.b #15 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b ENSGT00940000160875.a ENSGT00390000014840.a ENSGT00390000006617 ENSGT00940000158171 ENSGT00940000156623 ENSGT00390000013910 ENSGT00940000167116 ENSGT00390000016895 ENSGT00940000155698.A ENSGT00390000015750 ENSGT00940000155830 ENSGT00390000005666 ENSGT00940000157513 Mainland tiger snake MODERN SPECIES 241 FSCN1 (ENSNSUG00000014196) RNF216 (ENSNSUG00000014123) SMURF1 (ENSNSUG00000014122) #13 KPNA7 (ENSNSUG00000014121) #14 ENSNSUG00000014120 #15 ARPC1A (ENSNSUG00000014119) #16 ARPC1B (ENSNSUG00000014118) #17 CPSF4 (ENSNSUG00000014117) #22 ENSNSUG00000014116 ENSNSUG00000014115 ENSNSUG00000014114 TMEM11 (ENSNSUG00000014113) DHRS7B (ENSNSUG00000014112) USP22 (ENSNSUG00000014111) TNFRSF13B (ENSNSUG00000014110) ENSNSUG00000014109 COX19 (ENSNSUG00000014108) ADAP1 (ENSNSUG00000014107) GET4 (ENSNSUG00000014106) ENSNSUG00000014105 ENSNSUG00000014104 PRKAR1B (ENSNSUG00000014103) PDGFA (ENSNSUG00000014102) Eastern brown snake MODERN SPECIES 24 SLC29A4 (ENSPTXG00000006654) ENSPTXG00000006652 ENSPTXG00000006651 FBXL18 (ENSPTXG00000006650) ACTB (ENSPTXG00000006649) ENSPTXG00000006648 ENSPTXG00000006647 ENSPTXG00000006646 SMURF1 (ENSPTXG00000006645) #13 KPNA7 (ENSPTXG00000006643) #14 ENSPTXG00000006641 ##15 ARPC1A (ENSPTXG00000006639) #16 ARPC1B (ENSPTXG00000006637) #17 BUD31 (ENSPTXG00000006636) #20 PTCD1 (ENSPTXG00000006635) #21 CPSF4 (ENSPTXG00000006634) #22 ENSPTXG00000006632 ENSPTXG00000006631 ENSPTXG00000006628 NATD1 (ENSPTXG00000006626) TMEM11 (ENSPTXG00000006624) DHRS7B (ENSPTXG00000006623) USP22 (ENSPTXG00000006622) TNFRSF13B (ENSPTXG00000006619) ENSPTXG00000006618 COX19 (ENSPTXG00000006615) DNAAF5 (ENSPTXG00000006614) ENSPTXG00000006613 PDGFA (ENSPTXG00000006612) FAM20C (ENSPTXG00000006610) TRRAP (ENSPTXG00000001456) #12 Blue-lipped sea krait MODERN SPECIES 2816 SMURF1 (ENSLLTG00000001102) #13 KPNA7 (ENSLLTG00000001140) #14 ENSLLTG00000001193 #15 ARPC1A (ENSLLTG00000001243) #16 ARPC1B (ENSLLTG00000001264) #17 PDAP1 (ENSLLTG00000001279) #19 BUD31 (ENSLLTG00000001290) #20 PTCD1 (ENSLLTG00000001300) #21 CPSF4 (ENSLLTG00000001315) #22 Indian cobra MODERN SPECIES 15 SLC29A4 (ENSNNAG00000008031) TNRC18 (ENSNNAG00000007985) FBXL18 (ENSNNAG00000007962) ACTB (ENSNNAG00000007940) ENSNNAG00000016321 ENSNNAG00000016312 RNF216 (ENSNNAG00000016285) SMURF1 (ENSNNAG00000016275) #13 KPNA7 (ENSNNAG00000016223) #14 ENSNNAG00000016182 #15 ARPC1A (ENSNNAG00000016149) #16 ARPC1B (ENSNNAG00000016131) #17 PDAP1 (ENSNNAG00000016121) #19 BUD31 (ENSNNAG00000016111) #20 PTCD1 (ENSNNAG00000016099) #21 CPSF4 (ENSNNAG00000016093) #22 ENSNNAG00000016085 MAP2K3 (ENSNNAG00000016061) NATD1 (ENSNNAG00000016053) TMEM11 (ENSNNAG00000016047) DHRS7B (ENSNNAG00000016027) USP22 (ENSNNAG00000015976) ENSNNAG00000015960 ENSNNAG00000015935 GET4 (ENSNNAG00000015914) SUN1 (ENSNNAG00000015884) DNAAF5 (ENSNNAG00000015816) PRKAR1B (ENSNNAG00000015791) PDGFA (ENSNNAG00000015774) ENSNNAG00000015761 ENSNNAG00000015731 #12 Lizard MODERN SPECIES 1327 FSCN1 (ENSACAG00000038737) ENSACAG00000011713 ENSACAG00000026600 SMURF1 (ENSACAG00000011792) #13 ENSACAG00000011927 #15 ARPC1A (ENSACAG00000012777) #16 ENSACAG00000038015 ##16 PDAP1 (ENSACAG00000038752) #19 BUD31 (ENSACAG00000012867) #20 PTCD1 (ENSACAG00000012871) #21 CPSF4 (ENSACAG00000042948) #22 ATP5MF (ENSACAG00000035548) #23 tuatara DUPLICATION tuatara MODERN SPECIES 1383 TNRC18 (ENSSPUG00000002773) FBXL18 (ENSSPUG00000002840) ACTB (ENSSPUG00000002859) FSCN1 (ENSSPUG00000002887) ENSSPUG00000002901 ENSSPUG00000002931 ENSSPUG00000002956 SMURF1 (ENSSPUG00000002982) #13 KPNA7 (ENSSPUG00000003169) #14 ENSSPUG00000003424 #15 ARPC1A (ENSSPUG00000003489) #16 ARPC1B (ENSSPUG00000003501) #17 PDAP1 (ENSSPUG00000003518) #19 BUD31 (ENSSPUG00000003523) #20 PTCD1 (ENSSPUG00000003540) #21 CPSF4 (ENSSPUG00000003549) #22 ENSSPUG00000003555 ENSSPUG00000003583 MAP2K3 (ENSSPUG00000003597) NATD1 (ENSSPUG00000003604) TMEM11 (ENSSPUG00000003610) DHRS7B (ENSSPUG00000003613) USP22 (ENSSPUG00000003619) ENSSPUG00000003638 MPRIP (ENSSPUG00000003643) PLD6 (ENSSPUG00000003666) FLCN (ENSSPUG00000003680) COPS3 (ENSSPUG00000003686) NT5M (ENSSPUG00000003697) MED9 (ENSSPUG00000003713) RASD1 (ENSSPUG00000003719) tuatara MODERN SPECIES 1429 FSCN2 (ENSSPUG00000014373) FAAP100 (ENSSPUG00000014384) NPLOC4 (ENSSPUG00000014398) PDE6G (ENSSPUG00000014412) OXLD1 (ENSSPUG00000014424) ENSSPUG00000014428 GPRC5C (ENSSPUG00000014438) GPR142 (ENSSPUG00000014444) BTBD17 (ENSSPUG00000014452) KIF19 (ENSSPUG00000014465) ENSSPUG00000014525 ENSSPUG00000014667 ENSSPUG00000014674 RPL38 (ENSSPUG00000014689) SDK2 (ENSSPUG00000014704) ENSSPUG00000014803 #22 ENSSPUG00000014825 #23 FAM104B (ENSSPUG00000014868) COG1 (ENSSPUG00000014882) SSTR2 (ENSSPUG00000014904) SLC39A11 (ENSSPUG00000014922) SOX9 (ENSSPUG00000014960) Anura ANCESTRAL SPECIES 288 ENSGT00950000183183.b.a #16 ENSGT00950000183183.b.b #17 ENSGT00390000018509.a #19 ENSGT00390000014300 #20 ENSGT00940000153974.A #21 ENSGT00940000155520 #22 ENSGT00940000165557 ENSGT01030000234586.A.a.b Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 10 FOXK1 (ENSLLEG00000016690) ENSLLEG00000016662 ENSLLEG00000016640 SLC29A4 (ENSLLEG00000016445) WIPI2 (ENSLLEG00000016159) SMURF1 (ENSLLEG00000028621) #13 ENSLLEG00000028588 ZC3H15 (ENSLLEG00000028373) KPNA7 (ENSLLEG00000028229) #14 ARPC1A (ENSLLEG00000028116) #16 ENSLLEG00000027985 #17 ENSLLEG00000027962 PDAP1 (ENSLLEG00000027924) #19 BUD31 (ENSLLEG00000027878) #20 PTCD1 (ENSLLEG00000027843) #21 CPSF4 (ENSLLEG00000027717) #22 ENSLLEG00000027669 ENSLLEG00000027622 ENSLLEG00000027610 TMEM11 (ENSLLEG00000027583) NATD1 (ENSLLEG00000027541) DHRS7B (ENSLLEG00000027436) ENSLLEG00000027410 USP22 (ENSLLEG00000026537) ENSLLEG00000026383 ENSLLEG00000026278 ENSLLEG00000026246 ENSLLEG00000026081 LUC7L (ENSLLEG00000025879) ENSLLEG00000025820 ENSLLEG00000025768 Leishan spiny toad MODERN SPECIES 3 TSPAN10 (ENSLLEG00000030419) PDE6G (ENSLLEG00000030413) ENSLLEG00000030405 CCDC137 (ENSLLEG00000030398) ENSLLEG00000030395 ENSLLEG00000030390 GPR142 (ENSLLEG00000030384) BTBD17 (ENSLLEG00000030376) KIF19 (ENSLLEG00000030339) ENSLLEG00000030307 TTYH2 (ENSLLEG00000030260) RPL38 (ENSLLEG00000030244) ENSLLEG00000030232 SDK2 (ENSLLEG00000029976) ENSLLEG00000029918 ENSLLEG00000029901 #22 ENSLLEG00000029886 COG1 (ENSLLEG00000029799) SSTR2 (ENSLLEG00000029782) SLC39A11 (ENSLLEG00000029721) ENSLLEG00000029704 ENSLLEG00000029692 ENSLLEG00000029684 SOX9 (ENSLLEG00000029660) ENSLLEG00000029649 ENSLLEG00000029642 ENSLLEG00000029629 ENSLLEG00000029619 KCNJ2 (ENSLLEG00000029614) KCNJ16 (ENSLLEG00000029603) ENSLLEG00000029593 Frog DUPLICATION Frog MODERN SPECIES 9 wdr75 (ENSXETG00000009873) ENSXETG00000041263 slc40a1 (ENSXETG00000009874) ENSXETG00000047419 ENSXETG00000040213 ENSXETG00000041077 asnsd1 (ENSXETG00000009878) XB5749127 [provisional] (ENSXETG00000009881) ankar (ENSXETG00000025109) osgepl1 (ENSXETG00000009883) ormdl1 (ENSXETG00000047362) pms1 (ENSXETG00000009885) mstn.2 (ENSXETG00000043668) mstn.1 (ENSXETG00000048016) ptcd1 (ENSXETG00000009891) #21 cpsf4 (ENSXETG00000009892) #22 kcnj12 (ENSXETG00000046715) atp5mf (ENSXETG00000043524) kpna7 (ENSXETG00000007497) #14 ENSXETG00000034868 ENSXETG00000041441 smurf1 (ENSXETG00000007498) #13 rnf216 (ENSXETG00000044685) fscn1 (ENSXETG00000007501) fbxl18 (ENSXETG00000007502) ENSXETG00000047797 tnrc18 (ENSXETG00000007504) actb (ENSXETG00000025116) ENSXETG00000046251 hspe1 (ENSXETG00000007510) hspd1 (ENSXETG00000007509) Frog MODERN SPECIES 1 mc3r (ENSXETG00000048875) ENSXETG00000048914 abca9 (ENSXETG00000021974) kif19 (ENSXETG00000012830) dnai2 (ENSXETG00000012829) ttyh2 (ENSXETG00000012828) cbx8 (ENSXETG00000041757) cbx4 (ENSXETG00000035662) ENSXETG00000049048 tbc1d16 (ENSXETG00000012824) ENSXETG00000004200 rpl38 (ENSXETG00000025319) ENSXETG00000036760 sdk2 (ENSXETG00000004643) cdc42ep4 (ENSXETG00000004642) cpsf4l (ENSXETG00000004641) #22 c17orf80 (ENSXETG00000035627) tspan10 (ENSXETG00000033433) PDE6G (ENSXETG00000040009) pde6g (ENSXETG00000042418) ccdc137 (ENSXETG00000033252) atp6v0a1 (ENSXETG00000004635) ENSXETG00000037864 ENSXETG00000041877 etv4 (ENSXETG00000030031) dcxr (ENSXETG00000004630) rac3 (ENSXETG00000033871) gpr142 (ENSXETG00000031481) btbd17 (ENSXETG00000039335) abca5 (ENSXETG00000031795) ENSXETG00000042830 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 345 ENSLACG00000017094 ENSLACG00000016952 FSCN1 (ENSLACG00000016447) RNF216 (ENSLACG00000015715) ENSLACG00000015668 ENSLACG00000015251 ENSLACG00000014575 SMURF1 (ENSLACG00000014191) #13 KPNA7 (ENSLACG00000013531) #14 ENSLACG00000012445 #15 ARPC1A (ENSLACG00000012158) #16 ARPC1B (ENSLACG00000011837) #17 PDAP1 (ENSLACG00000011502) #19 BUD31 (ENSLACG00000011373) #20 PTCD1 (ENSLACG00000011172) #21 CPSF4 (ENSLACG00000010938) #22 atp5mf (ENSLACG00000010797) ENSLACG00000005568 Coelacanth MODERN SPECIES 242 RNF213 (ENSLACG00000016942) ENSLACG00000017145 TSPAN10 (ENSLACG00000017189) PDE6G (ENSLACG00000017204) OXLD1 (ENSLACG00000017238) CCDC137 (ENSLACG00000017254) gprc5c (ENSLACG00000017372) GPR142 (ENSLACG00000017416) BTBD17 (ENSLACG00000017493) KIF19 (ENSLACG00000017516) DNAI2 (ENSLACG00000017644) TTYH2 (ENSLACG00000017674) ENSLACG00000017820 SDK2 (ENSLACG00000018359) ENSLACG00000018460 ENSLACG00000018470 #22 ENSLACG00000018480 FAM104B (ENSLACG00000018485) COG1 (ENSLACG00000018489) SSTR2 (ENSLACG00000018502) ENSLACG00000018532 SOX9 (ENSLACG00000018754)