Bilateria ANCESTRAL SPECIES ENSGT00390000015405 #22 Chordata ANCESTRAL SPECIES ENSGT00390000015405 #22 Vertebrata ANCESTRAL SPECIES ENSGT00390000015405 #22 Gnathostomata ANCESTRAL SPECIES 86 ENSGT00390000014687 ENSGT00940000159704 ENSGT00940000157404 ENSGT00940000162838 ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 Euteleostomi ANCESTRAL SPECIES 5 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Sarcopterygii ANCESTRAL SPECIES 54 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00660000097267 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000166667 ENSGT00940000158602 ENSGT00390000006915.d ENSGT01080000257376.a.b.a.a Tetrapoda ANCESTRAL SPECIES 15 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Amniota ANCESTRAL SPECIES 12 ENSGT00940000162977 ENSGT00940000170045 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mammalia ANCESTRAL SPECIES 22 ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00940000154206.b ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Theria ANCESTRAL SPECIES 13 ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00940000154206.b ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Eutheria ANCESTRAL SPECIES 2 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Primates ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.ib.a ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.ib.a.a.b ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Catarrhini ANCESTRAL SPECIES 17 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.mb ##30 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.b #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.mb ##30 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.b #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000010283.ab.a #23 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000155590.g.b #26 ENSGT00910000147398 #27 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.b #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000010283.ab.a #23 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000155590.g.b #26 ENSGT00910000147398 #27 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.b #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000010283.ab.a #23 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000155590.g.b #26 ENSGT00910000147398 #27 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 Sooty mangabey MODERN SPECIES 494 GFPT1 (ENSCATG00000040348) #7 ANTXR1 (ENSCATG00000031559) #8 GKN1 (ENSCATG00000013735) #9 GKN2 (ENSCATG00000032902) #10 BMP10 (ENSCATG00000013241) #11 ARHGAP25 (ENSCATG00000043043) #12 ENSCATG00000035050 #13 PROKR1 (ENSCATG00000001983) #14 APLF (ENSCATG00000015227) #15 FBXO48 (ENSCATG00000006573) #16 PLEK (ENSCATG00000037750) #17 CNRIP1 (ENSCATG00000037632) #18 PPP3R1 (ENSCATG00000036183) #19 PNO1 (ENSCATG00000018547) #20 DNAAF10 (ENSCATG00000028444) #21 C1D (ENSCATG00000045336) #22 ENSCATG00000033727 #23 ETAA1 (ENSCATG00000036073) #24 MEIS1 (ENSCATG00000030958) #25 ENSCATG00000012177 #26 ENSCATG00000045181 #27 SPRED2 (ENSCATG00000034117) #28 ACTR2 (ENSCATG00000036025) #29 RAB1A (ENSCATG00000030853) #30 CEP68 (ENSCATG00000032378) #31 SLC1A4 (ENSCATG00000036187) #32 SERTAD2 (ENSCATG00000012102) #33 ENSCATG00000045350 #34 AFTPH (ENSCATG00000032038) #35 LGALSL (ENSCATG00000029852) #36 PELI1 (ENSCATG00000031456) #37 Drill MODERN SPECIES 917 GFPT1 (ENSMLEG00000028520) #7 ENSMLEG00000006440 ANTXR1 (ENSMLEG00000038172) #8 GKN1 (ENSMLEG00000036299) #9 GKN2 (ENSMLEG00000043292) #10 BMP10 (ENSMLEG00000030154) #11 ARHGAP25 (ENSMLEG00000038657) #12 PROKR1 (ENSMLEG00000037719) #14 APLF (ENSMLEG00000028828) #15 FBXO48 (ENSMLEG00000029566) #16 PLEK (ENSMLEG00000039341) #17 CNRIP1 (ENSMLEG00000039450) #18 PPP3R1 (ENSMLEG00000038265) #19 ENSMLEG00000035878 #20 DNAAF10 (ENSMLEG00000039884) #21 C1D (ENSMLEG00000027619) #22 Olive baboon MODERN SPECIES 5 ANTXR1 (ENSPANG00000022518) #8 ENSPANG00000034498 ENSPANG00000047885 GKN1 (ENSPANG00000008629) #9 GKN2 (ENSPANG00000020409) #10 BMP10 (ENSPANG00000049229) #11 ARHGAP25 (ENSPANG00000010754) #12 PROKR1 (ENSPANG00000048102) #14 APLF (ENSPANG00000010484) #15 FBXO48 (ENSPANG00000019905) #16 PLEK (ENSPANG00000005755) #17 CNRIP1 (ENSPANG00000029881) #18 PPP3R1 (ENSPANG00000024026) #19 ENSPANG00000031684 #20 DNAAF10 (ENSPANG00000011915) #21 C1D (ENSPANG00000002886) #22 ETAA1 (ENSPANG00000007449) #24 MEIS1 (ENSPANG00000008059) #25 ENSPANG00000049032 SPRED2 (ENSPANG00000015698) #28 ACTR2 (ENSPANG00000007073) #29 RAB1A (ENSPANG00000010485) #30 CEP68 (ENSPANG00000009710) #31 SLC1A4 (ENSPANG00000025917) #32 SERTAD2 (ENSPANG00000021214) #33 ENSPANG00000033862 #34 AFTPH (ENSPANG00000019355) #35 LGALSL (ENSPANG00000007113) #36 PELI1 (ENSPANG00000008630) #37 VPS54 (ENSPANG00000022299) UGP2 (ENSPANG00000020689) Macaca ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.b #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000010283.ab.a #23 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000155590.g.b #26 ENSGT00910000147398 #27 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 Macaca_a DUPLICATION Macaca_a ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.b #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s.c #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.h Rhesus MODERN SPECIES 4 NFU1 (ENSMMUG00000059210) GFPT1 (ENSMMUG00000013797) #7 ANTXR1 (ENSMMUG00000014244) #8 ENSMMUG00000049123 #9 GKN2 (ENSMMUG00000014242) #10 BMP10 (ENSMMUG00000015055) #11 ARHGAP25 (ENSMMUG00000015052) #12 PROKR1 (ENSMMUG00000052056) #14 APLF (ENSMMUG00000007552) #15 FBXO48 (ENSMMUG00000060845) #16 PLEK (ENSMMUG00000009195) #17 CNRIP1 (ENSMMUG00000046992) #18 PPP3R1 (ENSMMUG00000046264) #19 PNO1 (ENSMMUG00000017461) #20 DNAAF10 (ENSMMUG00000017460) #21 C1D (ENSMMUG00000017209) #22 ETAA1 (ENSMMUG00000062156) #24 ENSMMUG00000049443 MEIS1 (ENSMMUG00000011216) #25 SPRED2 (ENSMMUG00000044784) #28 ACTR2 (ENSMMUG00000002263) #29 RAB1A (ENSMMUG00000021721) #30 CEP68 (ENSMMUG00000017019) #31 SLC1A4 (ENSMMUG00000010279) #32 SERTAD2 (ENSMMUG00000047067) #33 ENSMMUG00000014862 AFTPH (ENSMMUG00000006503) #35 ENSMMUG00000006504 #34 LGALSL (ENSMMUG00000064711) #36 PELI1 (ENSMMUG00000059267) #37 VPS54 (ENSMMUG00000008772) Crab-eating macaque MODERN SPECIES 4 ANTXR1 (ENSMFAG00000044025) #8 ENSMFAG00000047324 GKN1 (ENSMFAG00000032957) #9 GKN2 (ENSMFAG00000044673) #10 BMP10 (ENSMFAG00000038780) #11 ARHGAP25 (ENSMFAG00000001418) #12 PROKR1 (ENSMFAG00000043932) #14 APLF (ENSMFAG00000045051) #15 FBXO48 (ENSMFAG00000038551) #16 PLEK (ENSMFAG00000054603) #17 CNRIP1 (ENSMFAG00000035167) #18 PPP3R1 (ENSMFAG00000031560) #19 PNO1 (ENSMFAG00000043544) #20 ENSMFAG00000064848 DNAAF10 (ENSMFAG00000042360) #21 ENSMFAG00000034261 #22 ENSMFAG00000056299 ETAA1 (ENSMFAG00000039723) #24 MEIS1 (ENSMFAG00000042877) #25 SPRED2 (ENSMFAG00000031151) #28 ACTR2 (ENSMFAG00000044097) #29 ENSMFAG00000061807 ENSMFAG00000046246 #30 ENSMFAG00000064674 ENSMFAG00000049291 CEP68 (ENSMFAG00000041409) #31 SLC1A4 (ENSMFAG00000003847) #32 ENSMFAG00000053049 ENSMFAG00000062833 SERTAD2 (ENSMFAG00000037664) #33 ENSMFAG00000061518 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000161277 ENSGT00940000160903 ENSGT00530000063929.b ENSGT00940000154175.i.b ENSGT00940000154175.i.a ENSGT00510000046760.a ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b ENSGT00940000158183 ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.b.a ENSGT01100000263493.a.b.a.a.b.b.b.b.a.b.a.a ENSGT00390000015405.s.d #22 ENSGT00940000161513 ENSGT00860000135858 ENSGT00390000004986 ENSGT00950000183201.a ENSGT00940000153669.a ENSGT00530000063695.a ENSGT00940000159074 ENSGT00950000183168.A ENSGT01030000234592.B ENSGT00940000154883.g.a.a ENSGT00940000165078.b ENSGT00940000165078.a ENSGT00940000162152 ENSGT00390000012084 ENSGT00940000160158 Crab-eating macaque MODERN SPECIES 5 ENSMFAG00000056286 TMEM123 (ENSMFAG00000057826) BIRC2 (ENSMFAG00000033018) YAP1 (ENSMFAG00000037027) CEP126 (ENSMFAG00000030828) ANGPTL5 (ENSMFAG00000036602) TRPC6 (ENSMFAG00000002181) ENSMFAG00000055655 ARHGAP42 (ENSMFAG00000000533) CNTN5 (ENSMFAG00000045865) ENSMFAG00000056178 ENSMFAG00000053298 ENSMFAG00000060346 ENSMFAG00000052366 ENSMFAG00000050345 ENSMFAG00000028681 #22 JRKL (ENSMFAG00000030353) CCDC82 (ENSMFAG00000036325) MAML2 (ENSMFAG00000031735) MTMR2 (ENSMFAG00000040303) CEP57 (ENSMFAG00000003768) FAM76B (ENSMFAG00000042981) ENSMFAG00000048059 SESN3 (ENSMFAG00000040069) ENSMFAG00000055573 ENDOD1 (ENSMFAG00000055848) KDM4F (ENSMFAG00000059067) ENSMFAG00000040102 KDM4D (ENSMFAG00000024894) CWC15 (ENSMFAG00000044052) AMOTL1 (ENSMFAG00000032749) Rhesus MODERN SPECIES 5 BIRC2 (ENSMMUG00000003400) BIRC3 (ENSMMUG00000058594) YAP1 (ENSMMUG00000003396) CFAP300 (ENSMMUG00000003394) CEP126 (ENSMMUG00000020784) ANGPTL5 (ENSMMUG00000020783) TRPC6 (ENSMMUG00000011835) PGR (ENSMMUG00000011846) ENSMMUG00000059891 ARHGAP42 (ENSMMUG00000022603) ENSMMUG00000057177 CNTN5 (ENSMMUG00000016737) ENSMMUG00000061185 ENSMMUG00000060458 ENSMMUG00000052417 ENSMMUG00000038443 #22 ENSMMUG00000058706 JRKL (ENSMMUG00000003821) ENSMMUG00000056501 CCDC82 (ENSMMUG00000007999) ENSMMUG00000052484 MAML2 (ENSMMUG00000014806) MTMR2 (ENSMMUG00000014801) CEP57 (ENSMMUG00000014796) FAM76B (ENSMMUG00000014792) SESN3 (ENSMMUG00000009394) ENDOD1 (ENSMMUG00000047793) SRSF8 (ENSMMUG00000007639) KDM4F (ENSMMUG00000045019) KDM4E (ENSMMUG00000059644) KDM4D (ENSMMUG00000023376) Pig-tailed macaque MODERN SPECIES 341 ENSMNEG00000025946 GKN1 (ENSMNEG00000043462) #9 GKN2 (ENSMNEG00000031833) #10 ENSMNEG00000032842 BMP10 (ENSMNEG00000042295) #11 ARHGAP25 (ENSMNEG00000037188) #12 ENSMNEG00000007960 PROKR1 (ENSMNEG00000037205) #14 APLF (ENSMNEG00000028788) #15 FBXO48 (ENSMNEG00000026784) #16 PLEK (ENSMNEG00000029803) #17 CNRIP1 (ENSMNEG00000028096) #18 PPP3R1 (ENSMNEG00000043603) #19 ENSMNEG00000031066 #20 DNAAF10 (ENSMNEG00000027774) #21 C1D (ENSMNEG00000040612) #22 ENSMNEG00000038737 #23 ETAA1 (ENSMNEG00000043227) #24 MEIS1 (ENSMNEG00000037352) #25 ENSMNEG00000023818 #26 ENSMNEG00000004414 #27 SPRED2 (ENSMNEG00000028343) #28 ACTR2 (ENSMNEG00000044163) #29 ENSMNEG00000042121 ##30 CEP68 (ENSMNEG00000032212) #31 SLC1A4 (ENSMNEG00000004689) #32 ENSMNEG00000006388 SERTAD2 (ENSMNEG00000008861) #33 ENSMNEG00000025227 #34 AFTPH (ENSMNEG00000040816) #35 LGALSL (ENSMNEG00000029755) #36 Vervet Monkey MODERN SPECIES 5 ENSCSAG00000019443 NFU1 (ENSCSAG00000014991) GFPT1 (ENSCSAG00000014984) #7 ANTXR1 (ENSCSAG00000014972) #8 GKN1 (ENSCSAG00000014956) #9 GKN2 (ENSCSAG00000014947) #10 BMP10 (ENSCSAG00000014937) #11 ARHGAP25 (ENSCSAG00000014930) #12 APLF (ENSCSAG00000014912) #15 FBXO48 (ENSCSAG00000014884) #16 PLEK (ENSCSAG00000014878) #17 CNRIP1 (ENSCSAG00000014867) #18 PPP3R1 (ENSCSAG00000014862) #19 PNO1 (ENSCSAG00000014847) #20 DNAAF10 (ENSCSAG00000014819) #21 C1D (ENSCSAG00000014811) #22 ETAA1 (ENSCSAG00000014804) #24 MEIS1 (ENSCSAG00000014795) #25 SPRED2 (ENSCSAG00000014788) #28 ACTR2 (ENSCSAG00000014779) #29 ENSCSAG00000014775 CEP68 (ENSCSAG00000014763) #31 SLC1A4 (ENSCSAG00000014735) #32 ENSCSAG00000019444 SERTAD2 (ENSCSAG00000019445) #33 AFTPH (ENSCSAG00000014726) #35 LGALSL (ENSCSAG00000014717) #36 PELI1 (ENSCSAG00000014710) #37 VPS54 (ENSCSAG00000014705) UGP2 (ENSCSAG00000014697) MDH1 (ENSCSAG00000014691) Rhinopithecus ANCESTRAL SPECIES ENSGT00390000015405.s #22 Golden snub-nosed monkey MODERN SPECIES 857 C1D (ENSRROG00000029013) #22 ENSRROG00000029028 ##23 ETAA1 (ENSRROG00000044826) #24 Black snub-nosed monkey MODERN SPECIES 560 C1D (ENSRBIG00000026471) #22 ENSRBIG00000027096 ETAA1 (ENSRBIG00000023781) #24 ALK (ENSRBIG00000035945) CLIP4 (ENSRBIG00000044783) PCARE (ENSRBIG00000036326) TOGARAM2 (ENSRBIG00000018526) WDR43 (ENSRBIG00000026670) TRMT61B (ENSRBIG00000033023) SPDYA (ENSRBIG00000042848) PPP1CB (ENSRBIG00000029126) PLB1 (ENSRBIG00000026344) FOSL2 (ENSRBIG00000037678) BABAM2 (ENSRBIG00000033019) ENSRBIG00000040954 RBKS (ENSRBIG00000035118) Hominoidea ANCESTRAL SPECIES 18 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000182901.a.a.a.b.b ##13 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Hominidae ANCESTRAL SPECIES 19 ENSGT00940000158488 #7 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556.tb.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000182901.a.a.a.b.b ##13 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00910000147556 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00940000164467.d.b.b.b ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885.k #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s.a #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a.b #29 ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000182901.a.a.a.b.b ##13 ENSGT00950000183050.b.b.a #37 Gorilla MODERN SPECIES 14 GKN1 (ENSGGOG00000009521) #9 GKN2 (ENSGGOG00000000046) #10 BMP10 (ENSGGOG00000044023) #11 ARHGAP25 (ENSGGOG00000009658) #12 PROKR1 (ENSGGOG00000016270) #14 APLF (ENSGGOG00000034832) #15 ENSGGOG00000041724 FBXO48 (ENSGGOG00000007346) #16 PLEK (ENSGGOG00000026840) #17 ENSGGOG00000005831 #17 CNRIP1 (ENSGGOG00000022874) #18 PPP3R1 (ENSGGOG00000039766) #19 PNO1 (ENSGGOG00000009158) #20 DNAAF10 (ENSGGOG00000010285) #21 ENSGGOG00000023297 ENSGGOG00000025982 #22 ETAA1 (ENSGGOG00000014411) #24 ENSGGOG00000005446 #25 SPRED2 (ENSGGOG00000007267) #28 ENSGGOG00000041600 ENSGGOG00000008505 #29 RAB1A (ENSGGOG00000026603) #30 CEP68 (ENSGGOG00000005826) #31 SLC1A4 (ENSGGOG00000011211) #32 AFTPH (ENSGGOG00000008449) #35 ENSGGOG00000023155 #34 LGALSL (ENSGGOG00000006386) #36 ENSGGOG00000022216 ##13 PELI1 (ENSGGOG00000013460) #37 VPS54 (ENSGGOG00000006294) UGP2 (ENSGGOG00000006283) Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00910000147768 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00940000164467.d.b.b.b ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885.k #17 ENSGT00390000004284 #18 ENSGT00950000183091.A.b #21 ENSGT00390000015405.s.a #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.tb.a.b #29 ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Human MODERN SPECIES 11 NFU1 (ENSG00000169599) GFPT1 (ENSG00000198380) #7 ANTXR1 (ENSG00000169604) #8 GKN1 (ENSG00000169605) #9 GKN2 (ENSG00000183607) #10 BMP10 (ENSG00000163217) #11 ARHGAP25 (ENSG00000163219) #12 PROKR1 (ENSG00000169618) #14 APLF (ENSG00000169621) #15 FBXO48 (ENSG00000204923) #16 PLEK (ENSG00000115956) #17 CNRIP1 (ENSG00000119865) #18 PPP3R1 (ENSG00000221823) #19 PNO1 (ENSG00000115946) #20 DNAAF10 (ENSG00000243667) #21 C1D (ENSG00000197223) #22 ETAA1 (ENSG00000143971) #24 MEIS1 (ENSG00000143995) #25 SPRED2 (ENSG00000198369) #28 ACTR2 (ENSG00000138071) #29 RAB1A (ENSG00000138069) #30 CEP68 (ENSG00000011523) #31 SLC1A4 (ENSG00000115902) #32 SERTAD2 (ENSG00000179833) #33 AFTPH (ENSG00000119844) #35 LGALSL (ENSG00000119862) #36 PELI1 (ENSG00000197329) #37 VPS54 (ENSG00000143952) UGP2 (ENSG00000169764) MDH1 (ENSG00000014641) WDPCP (ENSG00000143951) Pan ANCESTRAL SPECIES 17 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00940000164467.d.b.b.b ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885.k #17 ENSGT00390000004284 #18 ENSGT00950000183091.A.b #21 ENSGT00390000018052.l #20 ENSGT00390000015405.s.b #22 ENSGT00390000015405.s.a #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Bonobo MODERN SPECIES 14 NFU1 (ENSPPAG00000035496) GFPT1 (ENSPPAG00000043271) #7 ANTXR1 (ENSPPAG00000038605) #8 GKN1 (ENSPPAG00000035903) #9 GKN2 (ENSPPAG00000042895) #10 BMP10 (ENSPPAG00000041693) #11 ARHGAP25 (ENSPPAG00000035053) #12 PROKR1 (ENSPPAG00000042374) #14 ENSPPAG00000036471 APLF (ENSPPAG00000033703) #15 FBXO48 (ENSPPAG00000030285) #16 PLEK (ENSPPAG00000036621) #17 CNRIP1 (ENSPPAG00000036249) #18 PNO1 (ENSPPAG00000039314) #20 ENSPPAG00000032606 #21 ENSPPAG00000037847 #22 ETAA1 (ENSPPAG00000034986) #24 ENSPPAG00000037169 #25 SPRED2 (ENSPPAG00000042240) #28 ENSPPAG00000026570 ENSPPAG00000030634 #29 RAB1A (ENSPPAG00000030253) #30 CEP68 (ENSPPAG00000026445) #31 SLC1A4 (ENSPPAG00000041051) #32 SERTAD2 (ENSPPAG00000033136) #33 ENSPPAG00000031785 #34 AFTPH (ENSPPAG00000028223) #35 LGALSL (ENSPPAG00000039473) #36 PELI1 (ENSPPAG00000044117) #37 VPS54 (ENSPPAG00000028874) UGP2 (ENSPPAG00000038898) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00390000015405.s.b #22 Homo/Pan group ANCESTRAL SPECIES 60 ENSGT00940000156530.c #19 ENSGT00390000018052.l #20 ENSGT00390000015405.s.b #22 Pan ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00940000164467.d.b.b.b ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885.k #17 ENSGT00390000004284 #18 ENSGT00950000183091.A.b #21 ENSGT00390000018052.l #20 ENSGT00390000015405.s.b #22 ENSGT00390000015405.s.a #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a #29 ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Chimpanzee MODERN SPECIES 14 NFU1 (ENSPTRG00000012016) GFPT1 (ENSPTRG00000024129) #7 ANTXR1 (ENSPTRG00000012011) #8 GKN1 (ENSPTRG00000012010) #9 GKN2 (ENSPTRG00000012009) #10 BMP10 (ENSPTRG00000051530) #11 ARHGAP25 (ENSPTRG00000012007) #12 PROKR1 (ENSPTRG00000051956) #14 ENSPTRG00000047822 APLF (ENSPTRG00000012004) #15 FBXO48 (ENSPTRG00000030457) #16 PLEK (ENSPTRG00000012003) #17 CNRIP1 (ENSPTRG00000012002) #18 PNO1 (ENSPTRG00000011999) #20 ENSPTRG00000041941 #21 C1D (ENSPTRG00000023558) #22 ETAA1 (ENSPTRG00000011996) #24 MEIS1 (ENSPTRG00000011994) #25 SPRED2 (ENSPTRG00000011992) #28 ENSPTRG00000047998 ENSPTRG00000011990 #29 RAB1A (ENSPTRG00000011989) #30 CEP68 (ENSPTRG00000011988) #31 SLC1A4 (ENSPTRG00000011985) #32 SERTAD2 (ENSPTRG00000030469) #33 ENSPTRG00000045952 #34 AFTPH (ENSPTRG00000011983) #35 LGALSL (ENSPTRG00000047293) #36 PELI1 (ENSPTRG00000023869) #37 VPS54 (ENSPTRG00000011978) UGP2 (ENSPTRG00000011976) Gorilla MODERN SPECIES 1 ZNF37A (ENSGGOG00000006145) ZNF33A (ENSGGOG00000014383) ZNF25 (ENSGGOG00000023307) ZNF248 (ENSGGOG00000016885) ENSGGOG00000027469 ENSGGOG00000036120 ANKRD30A (ENSGGOG00000016263) GJD4 (ENSGGOG00000005857) CCNY (ENSGGOG00000004406) CREM (ENSGGOG00000003999) CUL2 (ENSGGOG00000003348) PARD3 (ENSGGOG00000005482) NRP1 (ENSGGOG00000001496) ITGB1 (ENSGGOG00000006118) CCDC7 (ENSGGOG00000004506) ENSGGOG00000022296 #22 EPC1 (ENSGGOG00000008088) ENSGGOG00000043841 ENSGGOG00000040767 KIF5B (ENSGGOG00000013417) ARHGAP12 (ENSGGOG00000012753) ZEB1 (ENSGGOG00000010090) ZNF438 (ENSGGOG00000002677) ENSGGOG00000037717 ENSGGOG00000022362 MAP3K8 (ENSGGOG00000005573) ENSGGOG00000025617 ENSGGOG00000043632 ENSGGOG00000009335 JCAD (ENSGGOG00000017151) ENSGGOG00000026771 Orangutan MODERN SPECIES 14 NFU1 (ENSPPYG00000012339) GFPT1 (ENSPPYG00000012340) #7 ANTXR1 (ENSPPYG00000030579) #8 GKN1 (ENSPPYG00000012343) #9 GKN2 (ENSPPYG00000012344) #10 BMP10 (ENSPPYG00000012345) #11 ARHGAP25 (ENSPPYG00000012346) #12 PROKR1 (ENSPPYG00000012347) #14 APLF (ENSPPYG00000012348) #15 FBXO48 (ENSPPYG00000012736) #16 PLEK (ENSPPYG00000040535) #17 CNRIP1 (ENSPPYG00000012351) #18 PPP3R1 (ENSPPYG00000031425) #19 PNO1 (ENSPPYG00000033861) #20 DNAAF10 (ENSPPYG00000012352) #21 C1D (ENSPPYG00000012354) #22 ETAA1 (ENSPPYG00000012355) #24 ENSPPYG00000012356 #25 SPRED2 (ENSPPYG00000012358) #28 ACTR2 (ENSPPYG00000012359) #29 RAB1A (ENSPPYG00000012360) #30 CEP68 (ENSPPYG00000012361) #31 SLC1A4 (ENSPPYG00000041756) #32 SERTAD2 (ENSPPYG00000035823) #33 AFTPH (ENSPPYG00000012364) #35 ENSPPYG00000012365 #34 LGALSL (ENSPPYG00000012366) #36 PELI1 (ENSPPYG00000012369) #37 VPS54 (ENSPPYG00000012370) UGP2 (ENSPPYG00000012371) MDH1 (ENSPPYG00000012373) Gibbon MODERN SPECIES 4 GFPT1 (ENSNLEG00000010084) #7 ENSNLEG00000034994 ANTXR1 (ENSNLEG00000010058) #8 GKN1 (ENSNLEG00000029810) #9 GKN2 (ENSNLEG00000010046) #10 BMP10 (ENSNLEG00000010043) #11 ARHGAP25 (ENSNLEG00000010028) #12 PROKR1 (ENSNLEG00000010024) #14 APLF (ENSNLEG00000010019) #15 FBXO48 (ENSNLEG00000010016) #16 PLEK (ENSNLEG00000010002) #17 CNRIP1 (ENSNLEG00000009999) #18 PPP3R1 (ENSNLEG00000026538) #19 PNO1 (ENSNLEG00000034233) #20 DNAAF10 (ENSNLEG00000030882) #21 ENSNLEG00000032919 #22 ETAA1 (ENSNLEG00000009972) #24 ENSNLEG00000009963 #25 ENSNLEG00000027615 #27 SPRED2 (ENSNLEG00000009959) #28 ACTR2 (ENSNLEG00000009948) #29 RAB1A (ENSNLEG00000009944) #30 ENSNLEG00000009939 #31 SLC1A4 (ENSNLEG00000009927) #32 SERTAD2 (ENSNLEG00000029151) #33 ENSNLEG00000009923 #34 AFTPH (ENSNLEG00000009902) #35 LGALSL (ENSNLEG00000031680) #36 ENSNLEG00000028443 ##13 PELI1 (ENSNLEG00000009891) #37 VPS54 (ENSNLEG00000009859) Platyrrhini ANCESTRAL SPECIES ENSGT00390000015405.s #22 Cebidae ANCESTRAL SPECIES ENSGT00390000015405.s #22 Cebidae_a ANCESTRAL SPECIES ENSGT00390000015405.s #22 Capuchin MODERN SPECIES 3 ASB17 (ENSCCAG00000026971) ENSCCAG00000023736 ST6GALNAC3 (ENSCCAG00000030233) ENSCCAG00000018853 ENSCCAG00000027183 ST6GALNAC5 (ENSCCAG00000022527) PIGK (ENSCCAG00000033215) ENSCCAG00000020636 ENSCCAG00000035323 ENSCCAG00000026907 AK5 (ENSCCAG00000033969) ZZZ3 (ENSCCAG00000032124) USP33 (ENSCCAG00000038065) MIGA1 (ENSCCAG00000036798) NEXN (ENSCCAG00000037450) ENSCCAG00000023340 #22 FUBP1 (ENSCCAG00000036537) DNAJB4 (ENSCCAG00000025488) GIPC2 (ENSCCAG00000036013) PTGFR (ENSCCAG00000032144) IFI44L (ENSCCAG00000034830) IFI44 (ENSCCAG00000025901) ENSCCAG00000022401 ADGRL4 (ENSCCAG00000036750) ENSCCAG00000020900 ENSCCAG00000009909 SERF1B (ENSCCAG00000016705) ENSCCAG00000010507 ENSCCAG00000021648 ENSCCAG00000028673 ENSCCAG00000011359 Simiiformes ANCESTRAL SPECIES ENSGT00390000015405.t ##22 Platyrrhini ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.c #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.t ##22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a.a.b #37 Cebidae ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.c #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.t ##22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a.a.b #37 Marmoset MODERN SPECIES 5 GFPT1 (ENSCJAG00000019141) #7 ANTXR1 (ENSCJAG00000019111) #8 GKN1 (ENSCJAG00000019108) #9 GKN2 (ENSCJAG00000019101) #10 BMP10 (ENSCJAG00000019096) #11 ARHGAP25 (ENSCJAG00000019073) #12 PROKR1 (ENSCJAG00000019067) #14 ENSCJAG00000078317 APLF (ENSCJAG00000006460) #15 FBXO48 (ENSCJAG00000006473) #16 PLEK (ENSCJAG00000006477) #17 CNRIP1 (ENSCJAG00000039706) #18 PPP3R1 (ENSCJAG00000006498) #19 PNO1 (ENSCJAG00000006564) #20 DNAAF10 (ENSCJAG00000044589) #21 ENSCJAG00000006589 ##22 ENSCJAG00000083243 ETAA1 (ENSCJAG00000006604) #24 MEIS1 (ENSCJAG00000006613) #25 ENSCJAG00000073899 ENSCJAG00000067866 ENSCJAG00000079193 ENSCJAG00000080598 #26 SPRED2 (ENSCJAG00000006693) #28 ACTR2 (ENSCJAG00000006722) #29 ENSCJAG00000046275 ##30 ENSCJAG00000074307 ENSCJAG00000072263 CEP68 (ENSCJAG00000006788) #31 SLC1A4 (ENSCJAG00000006795) #32 ENSCJAG00000074052 Cebidae_a ANCESTRAL SPECIES 30 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.l.c #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.t ##22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a.a.b #37 ENSGT00390000000583 Capuchin MODERN SPECIES 23 GFPT1 (ENSCCAG00000031415) #7 ANTXR1 (ENSCCAG00000027435) #8 GKN1 (ENSCCAG00000038006) #9 GKN2 (ENSCCAG00000038016) #10 BMP10 (ENSCCAG00000022639) #11 ARHGAP25 (ENSCCAG00000020753) #12 PROKR1 (ENSCCAG00000027029) #14 APLF (ENSCCAG00000021851) #15 FBXO48 (ENSCCAG00000016980) #16 PLEK (ENSCCAG00000026558) #17 CNRIP1 (ENSCCAG00000034672) #18 PPP3R1 (ENSCCAG00000029751) #19 ENSCCAG00000017887 ENSCCAG00000030366 #20 DNAAF10 (ENSCCAG00000018459) #21 ENSCCAG00000030405 ##22 ETAA1 (ENSCCAG00000027189) #24 ENSCCAG00000023051 MEIS1 (ENSCCAG00000020640) #25 SPRED2 (ENSCCAG00000035702) #28 ACTR2 (ENSCCAG00000030047) #29 ENSCCAG00000021773 ENSCCAG00000038117 RAB1A (ENSCCAG00000021869) #30 CEP68 (ENSCCAG00000022595) #31 ENSCCAG00000037790 SLC1A4 (ENSCCAG00000022825) #32 ENSCCAG00000032655 AFTPH (ENSCCAG00000022631) #35 ENSCCAG00000030319 #34 LGALSL (ENSCCAG00000035879) #36 Bolivian squirrel monkey MODERN SPECIES 48 GFPT1 (ENSSBOG00000033878) #7 ANTXR1 (ENSSBOG00000033293) #8 GKN1 (ENSSBOG00000030955) #9 GKN2 (ENSSBOG00000034618) #10 ENSSBOG00000034011 ##9 BMP10 (ENSSBOG00000025851) #11 ARHGAP25 (ENSSBOG00000006007) #12 PROKR1 (ENSSBOG00000027190) #14 APLF (ENSSBOG00000023612) #15 FBXO48 (ENSSBOG00000021207) #16 PLEK (ENSSBOG00000031071) #17 CNRIP1 (ENSSBOG00000020258) #18 PPP3R1 (ENSSBOG00000021442) #19 ENSSBOG00000026710 #20 DNAAF10 (ENSSBOG00000035020) #21 ENSSBOG00000025275 ##22 ETAA1 (ENSSBOG00000020086) #24 MEIS1 (ENSSBOG00000000062) #25 ENSSBOG00000018908 SPRED2 (ENSSBOG00000000156) #28 ACTR2 (ENSSBOG00000028028) #29 ENSSBOG00000024339 ENSSBOG00000018757 ENSSBOG00000031295 RAB1A (ENSSBOG00000023732) #30 CEP68 (ENSSBOG00000033296) #31 SLC1A4 (ENSSBOG00000023405) #32 AFTPH (ENSSBOG00000027803) #35 ENSSBOG00000019039 #34 LGALSL (ENSSBOG00000029775) #36 PELI1 (ENSSBOG00000001340) #37 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 521 ENSANAG00000029879 ARHGAP25 (ENSANAG00000024401) #12 PROKR1 (ENSANAG00000023501) #14 APLF (ENSANAG00000019373) #15 FBXO48 (ENSANAG00000025635) #16 PLEK (ENSANAG00000032204) #17 CNRIP1 (ENSANAG00000029323) #18 ENSANAG00000030200 #19 ENSANAG00000021228 #20 DNAAF10 (ENSANAG00000029737) #21 ENSANAG00000035972 ##22 ETAA1 (ENSANAG00000027571) #24 MEIS1 (ENSANAG00000034329) #25 Mas night monkey MODERN SPECIES 768 ENSANAG00000004458 CRB2 (ENSANAG00000030431) DENND1A (ENSANAG00000034989) LHX2 (ENSANAG00000018858) NEK6 (ENSANAG00000029360) PSMB7 (ENSANAG00000030640) ADGRD2 (ENSANAG00000036641) NR5A1 (ENSANAG00000027136) NR6A1 (ENSANAG00000036986) OLFML2A (ENSANAG00000028567) WDR38 (ENSANAG00000033407) RPL35 (ENSANAG00000032849) ENSANAG00000021654 GOLGA1 (ENSANAG00000020513) SCAI (ENSANAG00000024288) ENSANAG00000005773 ##22 ENSANAG00000035375 PPP6C (ENSANAG00000033545) ENSANAG00000002363 ENSANAG00000029634 HSPA5 (ENSANAG00000038513) ENSANAG00000002903 GAPVD1 (ENSANAG00000026547) ENSANAG00000006107 MAPKAP1 (ENSANAG00000038007) PBX3 (ENSANAG00000026691) MVB12B (ENSANAG00000021467) LMX1B (ENSANAG00000037425) ZBTB43 (ENSANAG00000038335) ZBTB34 (ENSANAG00000037523) ENSANAG00000033431 Catarrhini ANCESTRAL SPECIES 18 ENSGT00940000153289.a.a.a ENSGT00910000146898 ENSGT00910000147360 ENSGT00910000148289 ENSGT00940000154935 ENSGT00940000155303 ENSGT00930000151028 ENSGT00390000000153.l.b.c.a ENSGT01030000234539.b.b.b ENSGT00940000156008 ENSGT00910000147265 ENSGT00390000008264 ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000154368.k ENSGT00940000156653 ENSGT00950000183185.c.a.b ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b ENSGT01050000244940.a.b ENSGT00390000015172 ENSGT00940000155509 ENSGT00940000159143 ENSGT00940000156033 Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000153289.a.a.a ENSGT00910000146898 ENSGT00910000147360 ENSGT00910000148289 ENSGT00940000154935 ENSGT00940000155303 ENSGT00930000151028 ENSGT00390000000153.l.b.c.a ENSGT01030000234539.b.b.b ENSGT00940000156008 ENSGT00910000147265 ENSGT00390000008264 ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653 ENSGT00950000183185.c.a.b ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b ENSGT01050000244940.a.b ENSGT00390000015172 ENSGT00940000155509 ENSGT00940000159143 ENSGT00940000156033 ENSGT01090000260051.b.a.a.b.b Hominidae ANCESTRAL SPECIES 13 ENSGT00390000014618.a ENSGT00940000153289.a.a.a ENSGT00910000146898 ENSGT00910000147360 ENSGT00940000154935 ENSGT00940000155303 ENSGT00930000151028 ENSGT00390000000153.l.b.c.a ENSGT01030000234539.b.b.b ENSGT00940000156008 ENSGT00910000147265 ENSGT00390000008264 ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653 ENSGT00950000183185.c.a.b ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00940000156754.a.b ENSGT01050000244940.a.b ENSGT00390000015172 ENSGT00940000155509 ENSGT00940000159143 ENSGT00940000156033 ENSGT01090000260051.b.a.a.b.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 17 ENSGT00390000014618.a ENSGT00940000153289.a.a.a ENSGT00910000146898 ENSGT00910000147360 ENSGT00940000154935 ENSGT00940000155303 ENSGT00930000151028 ENSGT00390000000153.l.b.c.a ENSGT01030000234539.b.b.b ENSGT00940000156008 ENSGT00910000147265 ENSGT00390000008264 ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653.i ENSGT00950000183185.c.a.b ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00390000010045.g.a.b ENSGT00860000136117.a ENSGT00940000156754.a.b ENSGT01050000244940.a.b ENSGT00390000015172 ENSGT00940000155509 ENSGT00940000159143 Homo/Pan group ANCESTRAL SPECIES 18 ENSGT00390000014618.a ENSGT00940000153289.a.a.a ENSGT00910000146898 ENSGT00940000154935 ENSGT00940000155303 ENSGT00930000151028 ENSGT00390000000153.l.b.c.a ENSGT01030000234539.b.b.b ENSGT00940000156008 ENSGT00910000147265 ENSGT00390000008264 ENSGT00390000003738.a.a.b.y.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653.i ENSGT00950000183185.c.a.b ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00390000010045.g.a.b ENSGT00860000136117.a ENSGT00940000156754.a.b ENSGT01050000244940.a.b ENSGT00390000015172 ENSGT00940000155509 ENSGT00940000159143 Pan ANCESTRAL SPECIES 16 ENSGT00940000153289.a.a.a ENSGT00910000146898 ENSGT00940000154935 ENSGT00940000154156.d.n.b.b.a ENSGT00940000155303 ENSGT00930000151028 ENSGT00390000000153.l.b.c.a ENSGT01030000234539.b.b.b ENSGT00940000156008 ENSGT00910000147265 ENSGT00390000008264 ENSGT00390000003738.a.a.b.y.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653.i ENSGT00950000183185.c.a.b ENSGT00940000161631 ENSGT00940000162091 ENSGT00940000161199 ENSGT00940000159235 ENSGT00940000159732 ENSGT00390000010045.g.a.b ENSGT00860000136117.a ENSGT00940000156754.a.b ENSGT01050000244940.a.b ENSGT00390000015172 ENSGT00940000155509 ENSGT00940000159143 Bonobo MODERN SPECIES 1 KCNMA1 (ENSPPAG00000031977) ENSPPAG00000034645 ENSPPAG00000034656 DLG5 (ENSPPAG00000041668) ENSPPAG00000031986 ENSPPAG00000041726 ENSPPAG00000043469 ZMIZ1 (ENSPPAG00000037801) PPIF (ENSPPAG00000032388) ENSPPAG00000034843 ENSPPAG00000039528 ENSPPAG00000040556 ANXA11 (ENSPPAG00000035965) PLAC9 (ENSPPAG00000022596) TMEM254 (ENSPPAG00000037427) ENSPPAG00000040091 ##22 SFTPD (ENSPPAG00000040170) SFTPA2 (ENSPPAG00000037547) MAT1A (ENSPPAG00000029317) DYDC1 (ENSPPAG00000009095) DYDC2 (ENSPPAG00000036598) PRXL2A (ENSPPAG00000037245) TSPAN14 (ENSPPAG00000030989) ENSPPAG00000037034 ENSPPAG00000020127 ENSPPAG00000040005 NRG3 (ENSPPAG00000033661) GHITM (ENSPPAG00000014417) GPR15LG (ENSPPAG00000042583) CDHR1 (ENSPPAG00000011798) LRIT2 (ENSPPAG00000029485) Gorilla MODERN SPECIES 1 CDHR1 (ENSGGOG00000012764) C10orf99 (ENSGGOG00000012510) GHITM (ENSGGOG00000011008) NRG3 (ENSGGOG00000011517) ENSGGOG00000036412 ENSGGOG00000024160 ENSGGOG00000006297 TSPAN14 (ENSGGOG00000005770) PRXL2A (ENSGGOG00000013246) DYDC2 (ENSGGOG00000003755) DYDC1 (ENSGGOG00000002717) MAT1A (ENSGGOG00000005862) ANXA11 (ENSGGOG00000005851) PLAC9 (ENSGGOG00000011111) TMEM254 (ENSGGOG00000005287) ENSGGOG00000025808 ##22 SFTPD (ENSGGOG00000008952) ENSGGOG00000003464 SFTPA2 (ENSGGOG00000021975) ENSGGOG00000022019 SFTPA1 (ENSGGOG00000022096) ENSGGOG00000024380 ENSGGOG00000025726 RAB18 (ENSGGOG00000008086) MKX (ENSGGOG00000016220) ODAD2 (ENSGGOG00000014550) MPP7 (ENSGGOG00000013306) WAC (ENSGGOG00000005639) BAMBI (ENSGGOG00000004600) ENSGGOG00000000756 ENSGGOG00000026771 Orangutan MODERN SPECIES 1 LRIT2 (ENSPPYG00000002277) CDHR1 (ENSPPYG00000002278) GPR15LG (ENSPPYG00000002279) GHITM (ENSPPYG00000002280) ENSPPYG00000002282 NRG3 (ENSPPYG00000032077) SH2D4B (ENSPPYG00000002286) TSPAN14 (ENSPPYG00000002287) DYDC2 (ENSPPYG00000002288) DYDC1 (ENSPPYG00000002289) ENSPPYG00000002290 MAT1A (ENSPPYG00000002291) ANXA11 (ENSPPYG00000002292) PLAC9 (ENSPPYG00000038414) TMEM254 (ENSPPYG00000002293) ENSPPYG00000002294 ##22 ENSPPYG00000002295 ENSPPYG00000041507 ENSPPYG00000039923 ZCCHC24 (ENSPPYG00000035309) PPIF (ENSPPYG00000002301) ZMIZ1 (ENSPPYG00000002302) RPS24 (ENSPPYG00000002304) POLR3A (ENSPPYG00000002305) DLG5 (ENSPPYG00000002306) ENSPPYG00000002308 KCNMA1 (ENSPPYG00000002311) LRMDA (ENSPPYG00000002312) ZNF503 (ENSPPYG00000002853) COMTD1 (ENSPPYG00000002314) VDAC2 (ENSPPYG00000037153) Gibbon MODERN SPECIES DNAH10 (ENSNLEG00000002049) ATP6V0A2 (ENSNLEG00000001958) TCTN2 (ENSNLEG00000001951) GTF2H3 (ENSNLEG00000001843) EIF2B1 (ENSNLEG00000028701) DDX55 (ENSNLEG00000001658) TMED2 (ENSNLEG00000001652) ENSNLEG00000027322 SNRNP35 (ENSNLEG00000029859) RILPL2 (ENSNLEG00000001614) ENSNLEG00000031255 SBNO1 (ENSNLEG00000001502) ENSNLEG00000001478 MTRFR (ENSNLEG00000001470) MPHOSPH9 (ENSNLEG00000001405) ENSNLEG00000030288 ##22 ENSNLEG00000002378 ENSNLEG00000002315 ENSNLEG00000002281 VPS37B (ENSNLEG00000002279) CCDC62 (ENSNLEG00000002193) DENR (ENSNLEG00000029880) KNTC1 (ENSNLEG00000001977) RSRC2 (ENSNLEG00000034529) ZCCHC8 (ENSNLEG00000001723) CLIP1 (ENSNLEG00000001559) VPS33A (ENSNLEG00000001520) DIABLO (ENSNLEG00000001453) B3GNT4 (ENSNLEG00000001452) LRRC43 (ENSNLEG00000027791) IL31 (ENSNLEG00000001440) Cercopithecidae ANCESTRAL SPECIES 15 ENSGT00940000156033 ENSGT00940000159143 ENSGT00940000155509 ENSGT00390000015172 ENSGT01050000244940.a.b ENSGT00940000156754.a.b ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199 ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000154368.k ENSGT00940000156653 ENSGT00390000008264 ENSGT00910000147265 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154935 ENSGT00940000153289.a.a.a ENSGT00390000014618.a ENSGT00390000004409 ENSGT00950000182869.e.a.a.f Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00940000156033 ENSGT00940000159143 ENSGT00940000155509 ENSGT00390000015172 ENSGT01050000244940.a.b ENSGT00940000156754.a.b ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199.b.a ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000154368.k ENSGT00940000156653.n ENSGT00940000156653.o ENSGT00390000008264 ENSGT00910000147265 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154935 ENSGT00940000153289.a.a.a ENSGT00390000014618.a ENSGT00390000004409 Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000156033 ENSGT00940000159143 ENSGT00940000155509 ENSGT00390000015172 ENSGT01050000244940.a.b ENSGT00940000156754.a.b ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199.b.a ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653.n.b ENSGT00940000156653.o ENSGT00390000008264 ENSGT00910000147265 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154935 ENSGT00910000147319 ENSGT00940000153289.a.a.a ENSGT00390000014618.a ENSGT00390000004409 Cercopithecinae_b ANCESTRAL SPECIES 14 ENSGT00940000159143 ENSGT00940000155509 ENSGT00390000015172 ENSGT01050000244940.a.b ENSGT00940000156754.a.b ENSGT00950000183120.e.a.b.k ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199.b.a ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653.n.b ENSGT00390000008264 ENSGT00910000147265 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00390000014818.g.b.b ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154935 ENSGT00910000147319 ENSGT00940000153289.a.a.a ENSGT00390000014618.a ENSGT00390000004409 Olive baboon MODERN SPECIES 2 GHITM (ENSPANG00000022606) ENSPANG00000037881 NRG3 (ENSPANG00000022613) ENSPANG00000048493 SH2D4B (ENSPANG00000022612) TSPAN14 (ENSPANG00000022582) PRXL2A (ENSPANG00000022583) ENSPANG00000024230 DYDC2 (ENSPANG00000022584) DYDC1 (ENSPANG00000022585) MAT1A (ENSPANG00000022586) ANXA11 (ENSPANG00000022587) ENSPANG00000039078 TMEM254 (ENSPANG00000022580) ENSPANG00000044291 ENSPANG00000000501 ##22 SFTPD (ENSPANG00000022579) ENSPANG00000022578 ENSPANG00000037998 ENSPANG00000031002 ENSPANG00000039699 ZCCHC24 (ENSPANG00000022503) PPIF (ENSPANG00000022504) ZMIZ1 (ENSPANG00000022505) ENSPANG00000048295 ENSPANG00000047646 ENSPANG00000022507 POLR3A (ENSPANG00000022508) DLG5 (ENSPANG00000022509) ENSPANG00000040260 KCNMA1 (ENSPANG00000022497) Cercopithecinae_d ANCESTRAL SPECIES 214 ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199.b.a ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00940000165487 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000156653.n.b Drill MODERN SPECIES 407 ENSMLEG00000028412 ##22 SFTPD (ENSMLEG00000032015) Sooty mangabey MODERN SPECIES 379 SH2D4B (ENSCATG00000030474) TSPAN14 (ENSCATG00000031568) PRXL2A (ENSCATG00000006717) DYDC2 (ENSCATG00000007951) DYDC1 (ENSCATG00000002011) MAT1A (ENSCATG00000000417) ANXA11 (ENSCATG00000009045) ENSCATG00000033421 TMEM254 (ENSCATG00000029182) ENSCATG00000043348 ##22 SFTPD (ENSCATG00000036936) ENSCATG00000005654 ENSCATG00000033717 Macaca ANCESTRAL SPECIES 11 ENSGT00940000156033 ENSGT00940000159143 ENSGT00940000155509 ENSGT00390000015172 ENSGT01050000244940.a.b ENSGT00940000156754.a.b ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199.b.a ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000154368.k ENSGT00940000156653.n.a.a ENSGT00940000156653.o ENSGT00390000008264 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154935 ENSGT00910000147319 ENSGT00940000153289.a.a.a ENSGT00390000014618.a ENSGT00390000004409 Pig-tailed macaque MODERN SPECIES 353 ENSMNEG00000020863 ENSMNEG00000027191 ENSMNEG00000038329 SH2D4B (ENSMNEG00000036278) TSPAN14 (ENSMNEG00000032257) ENSMNEG00000039158 DYDC2 (ENSMNEG00000029695) DYDC1 (ENSMNEG00000002410) MAT1A (ENSMNEG00000042654) ANXA11 (ENSMNEG00000007272) PLAC9 (ENSMNEG00000031716) TMEM254 (ENSMNEG00000031740) ENSMNEG00000020626 ##22 SFTPD (ENSMNEG00000033500) ENSMNEG00000044696 ENSMNEG00000033190 ENSMNEG00000030862 ZCCHC24 (ENSMNEG00000042050) PPIF (ENSMNEG00000028765) ZMIZ1 (ENSMNEG00000041879) ENSMNEG00000014810 POLR3A (ENSMNEG00000035163) DLG5 (ENSMNEG00000026685) ENSMNEG00000043575 KCNMA1 (ENSMNEG00000039864) ENSMNEG00000039846 ENSMNEG00000021074 LRMDA (ENSMNEG00000029113) Macaca_a ANCESTRAL SPECIES 13 ENSGT00940000159143 ENSGT00940000155509 ENSGT00390000015172 ENSGT01050000244940.a.b ENSGT00940000156754.a.b ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199.b.a ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT01100000263493.a.b.a.a.b.b.b.a.b.a.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000154368.k ENSGT00940000156653.n.a.a ENSGT00940000156653.o ENSGT00390000008264 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154935 ENSGT00910000147319 ENSGT00940000153289.a.a.a ENSGT01100000263539.b.a.a.a.a.a.b.a.a.a.a.a.b.a.b ENSGT00390000014618.a Rhesus MODERN SPECIES 19 LRIT2 (ENSMMUG00000000659) CDHR1 (ENSMMUG00000000658) GHITM (ENSMMUG00000018572) NRG3 (ENSMMUG00000017380) ENSMMUG00000055918 ENSMMUG00000049411 TSPAN14 (ENSMMUG00000013895) PRXL2A (ENSMMUG00000021773) DYDC2 (ENSMMUG00000021774) DYDC1 (ENSMMUG00000055336) MAT1A (ENSMMUG00000018634) ENSMMUG00000063666 ANXA11 (ENSMMUG00000019780) PLAC9 (ENSMMUG00000003014) TMEM254 (ENSMMUG00000003015) ENSMMUG00000043184 ##22 SFTPD (ENSMMUG00000002787) MBL1 (ENSMMUG00000002786) ENSMMUG00000040590 SFTPA1 (ENSMMUG00000047229) ENSMMUG00000057196 ZCCHC24 (ENSMMUG00000051972) PPIF (ENSMMUG00000003189) ZMIZ1 (ENSMMUG00000008790) RPS24 (ENSMMUG00000030562) POLR3A (ENSMMUG00000005514) DLG5 (ENSMMUG00000009128) KCNMA1 (ENSMMUG00000018390) ENSMMUG00000050670 LRMDA (ENSMMUG00000023415) ENSMMUG00000059732 Crab-eating macaque MODERN SPECIES 19 CDHR1 (ENSMFAG00000001885) GPR15LG (ENSMFAG00000043609) GHITM (ENSMFAG00000043812) ENSMFAG00000058668 NRG3 (ENSMFAG00000039411) TSPAN14 (ENSMFAG00000045856) SH2D4B (ENSMFAG00000003299) PRXL2A (ENSMFAG00000043331) DYDC2 (ENSMFAG00000031434) DYDC1 (ENSMFAG00000036906) MAT1A (ENSMFAG00000038544) ENSMFAG00000063395 ANXA11 (ENSMFAG00000045443) ENSMFAG00000026512 ENSMFAG00000033371 ENSMFAG00000034034 ##22 SFTPD (ENSMFAG00000045610) ENSMFAG00000001265 ENSMFAG00000039235 ENSMFAG00000051159 ZCCHC24 (ENSMFAG00000063832) ENSMFAG00000054056 PPIF (ENSMFAG00000041215) ZMIZ1 (ENSMFAG00000043959) ENSMFAG00000056846 ENSMFAG00000037643 POLR3A (ENSMFAG00000032218) DLG5 (ENSMFAG00000032038) KCNMA1 (ENSMFAG00000035904) ENSMFAG00000049972 LRMDA (ENSMFAG00000032903) Rhinopithecus ANCESTRAL SPECIES 204 ENSGT00940000159732 ENSGT00940000159235 ENSGT00940000161199 ENSGT00940000162091 ENSGT00940000161631 ENSGT00950000183185.c.a.b ENSGT00940000156914 ENSGT00390000017848 ENSGT00390000016042 ENSGT00390000015405.t ##22 ENSGT00940000155748.b ENSGT00940000154368.k ENSGT00940000156653.l ENSGT00940000156653.m ENSGT00390000008264 ENSGT00940000156008 ENSGT01030000234539.b.b.b ENSGT00940000163541 ENSGT00390000000153.l.b.c.a ENSGT00930000151028 ENSGT00940000155303 ENSGT00940000154156.d.n.b.b.a.a ENSGT00940000154437.mc.a.a.a.b ENSGT00910000147360 ENSGT00910000146898 Golden snub-nosed monkey MODERN SPECIES 1067 MAT1A (ENSRROG00000029224) ENSRROG00000041756 ANXA11 (ENSRROG00000019845) PLAC9 (ENSRROG00000040785) TMEM254 (ENSRROG00000038790) ENSRROG00000005944 ##22 SFTPD (ENSRROG00000032074) ENSRROG00000038797 ENSRROG00000005158 ENSRROG00000033783 ZCCHC24 (ENSRROG00000041812) PPIF (ENSRROG00000036080) ZMIZ1 (ENSRROG00000033232) ENSRROG00000032510 POLR3A (ENSRROG00000025527) DLG5 (ENSRROG00000029367) ENSRROG00000035209 ENSRROG00000034151 ENSRROG00000034919 ENSRROG00000019711 ENSRROG00000031784 Black snub-nosed monkey MODERN SPECIES 1841 SH2D4B (ENSRBIG00000039902) TSPAN14 (ENSRBIG00000033365) PRXL2A (ENSRBIG00000031726) DYDC2 (ENSRBIG00000034822) DYDC1 (ENSRBIG00000025903) MAT1A (ENSRBIG00000039833) ANXA11 (ENSRBIG00000040122) PLAC9 (ENSRBIG00000043290) TMEM254 (ENSRBIG00000035777) ENSRBIG00000026211 ##22 SFTPD (ENSRBIG00000041704) ENSRBIG00000030139 ENSRBIG00000040102 ENSRBIG00000022591 Tarsier DUPLICATION Tarsier MODERN SPECIES 1022 PPP3R1 (ENSTSYG00000019531) #19 PNO1 (ENSTSYG00000004007) #20 WDR92 (ENSTSYG00000003991) #21 C1D (ENSTSYG00000035739) #22 Tarsier MODERN SPECIES 4614 ENSTSYG00000026573 #22 Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Lemuriformes ANCESTRAL SPECIES 19 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Mouse lemur MODERN SPECIES 26 ENSMICG00000044702 GFPT1 (ENSMICG00000035387) #7 ANTXR1 (ENSMICG00000003756) #8 GKN1 (ENSMICG00000003749) #9 GKN2 (ENSMICG00000003743) #10 BMP10 (ENSMICG00000044994) #11 ARHGAP25 (ENSMICG00000003739) #12 PROKR1 (ENSMICG00000045105) #14 ENSMICG00000003735 #15 FBXO48 (ENSMICG00000027392) #16 PLEK (ENSMICG00000003728) #17 CNRIP1 (ENSMICG00000003722) #18 PPP3R1 (ENSMICG00000037583) #19 ENSMICG00000010897 #20 DNAAF10 (ENSMICG00000010876) #21 C1D (ENSMICG00000032141) #22 ETAA1 (ENSMICG00000033585) #24 MEIS1 (ENSMICG00000017054) #25 SPRED2 (ENSMICG00000006435) #28 ENSMICG00000036415 #29 RAB1A (ENSMICG00000012587) #30 CEP68 (ENSMICG00000037255) #31 SLC1A4 (ENSMICG00000012577) #32 ENSMICG00000041471 ENSMICG00000044806 #34 AFTPH (ENSMICG00000037342) #35 LGALSL (ENSMICG00000031755) #36 PELI1 (ENSMICG00000044746) #37 VPS54 (ENSMICG00000035608) UGP2 (ENSMICG00000006509) ENSMICG00000015195 Lemuriformes_a ANCESTRAL SPECIES 52 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.g.a Coquerels sifaka MODERN SPECIES 350 ENSPCOG00000011569 GFPT1 (ENSPCOG00000025259) #7 ANTXR1 (ENSPCOG00000015864) #8 GKN1 (ENSPCOG00000015313) #9 GKN2 (ENSPCOG00000021868) #10 BMP10 (ENSPCOG00000014638) #11 ARHGAP25 (ENSPCOG00000019453) #12 PROKR1 (ENSPCOG00000021244) #14 ENSPCOG00000013580 #15 FBXO48 (ENSPCOG00000002660) #16 PLEK (ENSPCOG00000013510) #17 CNRIP1 (ENSPCOG00000024225) #18 PPP3R1 (ENSPCOG00000022338) #19 PNO1 (ENSPCOG00000025019) #20 DNAAF10 (ENSPCOG00000014968) #21 C1D (ENSPCOG00000016112) #22 ENSPCOG00000026949 ETAA1 (ENSPCOG00000001345) #24 Greater bamboo lemur MODERN SPECIES 617 PROKR1 (ENSPSMG00000000830) #14 APLF (ENSPSMG00000000808) #15 ENSPSMG00000000764 #16 PLEK (ENSPSMG00000000754) #17 CNRIP1 (ENSPSMG00000000727) #18 PPP3R1 (ENSPSMG00000000675) #19 PNO1 (ENSPSMG00000000616) #20 DNAAF10 (ENSPSMG00000000572) #21 C1D (ENSPSMG00000000528) #22 ETAA1 (ENSPSMG00000000519) #24 MEIS1 (ENSPSMG00000000482) #25 SPRED2 (ENSPSMG00000000404) #28 ACTR2 (ENSPSMG00000000347) #29 ENSPSMG00000000286 RAB1A (ENSPSMG00000000273) #30 CEP68 (ENSPSMG00000000219) #31 SLC1A4 (ENSPSMG00000000139) #32 SERTAD2 (ENSPSMG00000024045) #33 AFTPH (ENSPSMG00000024022) #35 LGALSL (ENSPSMG00000023973) #36 Bushbaby MODERN SPECIES 363 RAB9B (ENSOGAG00000015082) PLP1 (ENSOGAG00000015080) ENSOGAG00000005390 ENSOGAG00000030762 TCEAL1 (ENSOGAG00000011846) ENSOGAG00000011845 ENSOGAG00000005299 TCEAL4 (ENSOGAG00000030967) ENSOGAG00000034552 ENSOGAG00000027934 #22 BEX3 (ENSOGAG00000014857) ENSOGAG00000014854 TCEAL7 (ENSOGAG00000028590) ENSOGAG00000014850 ENSOGAG00000025432 ENSOGAG00000027892 TCEAL8 (ENSOGAG00000015533) ENSOGAG00000025040 ENSOGAG00000002202 ENSOGAG00000002201 ENSOGAG00000024066 ENSOGAG00000031379 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Tree shrew MODERN SPECIES 7170 C1D (ENSTBEG00000009797) #22 Glires ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Rodentia ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Sciuridae ANCESTRAL SPECIES 16 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00940000164891 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Marmotini ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000164891 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000154431.e.a.f ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Alpin marmot MODERN SPECIES 6 GKN1 (ENSMMMG00000005442) #9 GKN2 (ENSMMMG00000005457) #10 ENSMMMG00000005470 ##9 BMP10 (ENSMMMG00000005486) #11 ENSMMMG00000005514 ARHGAP25 (ENSMMMG00000005520) #12 ENSMMMG00000005553 APLF (ENSMMMG00000005578) #15 FBXO48 (ENSMMMG00000005580) #16 PLEK (ENSMMMG00000005592) #17 CNRIP1 (ENSMMMG00000005618) #18 ENSMMMG00000005630 PPP3R1 (ENSMMMG00000005651) #19 PNO1 (ENSMMMG00000005661) #20 DNAAF10 (ENSMMMG00000005668) #21 C1D (ENSMMMG00000005685) #22 ETAA1 (ENSMMMG00000005704) #24 ENSMMMG00000005754 ENSMMMG00000005757 MEIS1 (ENSMMMG00000005763) #25 ENSMMMG00000005870 ENSMMMG00000005873 SPRED2 (ENSMMMG00000005882) #28 ENSMMMG00000005906 ACTR2 (ENSMMMG00000005910) #29 RAB1A (ENSMMMG00000005929) #30 CEP68 (ENSMMMG00000005980) #31 SLC1A4 (ENSMMMG00000006026) #32 ENSMMMG00000006042 ENSMMMG00000006048 AFTPH (ENSMMMG00000006097) #35 Marmotini_b ANCESTRAL SPECIES 44 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000164891 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000154431.e.a.f ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 47 GFPT1 (ENSUPAG00010010498) #7 ANTXR1 (ENSUPAG00010010542) #8 GKN1 (ENSUPAG00010010567) #9 GKN2 (ENSUPAG00010010576) #10 ENSUPAG00010010583 ##9 BMP10 (ENSUPAG00010010590) #11 ARHGAP25 (ENSUPAG00010010596) #12 ENSUPAG00010010610 APLF (ENSUPAG00010010617) #15 FBXO48 (ENSUPAG00010010632) #16 PLEK (ENSUPAG00010010638) #17 CNRIP1 (ENSUPAG00010010645) #18 PPP3R1 (ENSUPAG00010010653) #19 PNO1 (ENSUPAG00010010658) #20 DNAAF10 (ENSUPAG00010010668) #21 ENSUPAG00010010674 #22 ETAA1 (ENSUPAG00010010688) #24 ENSUPAG00010010694 MEIS1 (ENSUPAG00010010695) #25 ENSUPAG00010010713 ENSUPAG00010010722 SPRED2 (ENSUPAG00010010724) #28 ENSUPAG00010010742 ACTR2 (ENSUPAG00010010750) #29 RAB1A (ENSUPAG00010010773) #30 CEP68 (ENSUPAG00010010822) #31 SLC1A4 (ENSUPAG00010010829) #32 ENSUPAG00010010837 SERTAD2 (ENSUPAG00010010839) #33 AFTPH (ENSUPAG00010010843) #35 LGALSL (ENSUPAG00010010929) #36 Arctic ground squirrel MODERN SPECIES 389 CNOT11 (ENSUPAG00010008934) RNF149 (ENSUPAG00010008945) ENSUPAG00010008977 #22 CREG2 (ENSUPAG00010008997) RFX8 (ENSUPAG00010009009) MAP4K4 (ENSUPAG00010009052) IL1R2 (ENSUPAG00010010625) IL1R1 (ENSUPAG00010010814) IL1RL2 (ENSUPAG00010010855) ENSUPAG00010010880 IL18R1 (ENSUPAG00010010899) IL18RAP (ENSUPAG00010010926) SLC9A4 (ENSUPAG00010010967) SLC9A2 (ENSUPAG00010010983) MFSD9 (ENSUPAG00010011005) TMEM182 (ENSUPAG00010011013) Squirrel MODERN SPECIES 91 GFPT1 (ENSSTOG00000013461) #7 ANTXR1 (ENSSTOG00000010370) #8 GKN1 (ENSSTOG00000024019) #9 GKN2 (ENSSTOG00000010364) #10 ENSSTOG00000025416 ##9 BMP10 (ENSSTOG00000010358) #11 ARHGAP25 (ENSSTOG00000010347) #12 ENSSTOG00000010343 APLF (ENSSTOG00000014677) #15 FBXO48 (ENSSTOG00000014675) #16 PLEK (ENSSTOG00000014667) #17 CNRIP1 (ENSSTOG00000004875) #18 PPP3R1 (ENSSTOG00000025985) #19 PNO1 (ENSSTOG00000026989) #20 DNAAF10 (ENSSTOG00000024192) #21 C1D (ENSSTOG00000012346) #22 ETAA1 (ENSSTOG00000027144) #24 MEIS1 (ENSSTOG00000009914) #25 ENSSTOG00000024155 SPRED2 (ENSSTOG00000022318) #28 ACTR2 (ENSSTOG00000012608) #29 ENSSTOG00000020693 #30 CEP68 (ENSSTOG00000011479) #31 SLC1A4 (ENSSTOG00000025160) #32 SERTAD2 (ENSSTOG00000008454) #33 ENSSTOG00000030042 #34 AFTPH (ENSSTOG00000020828) #35 LGALSL (ENSSTOG00000024204) #36 PELI1 (ENSSTOG00000026315) #37 VPS54 (ENSSTOG00000023517) UGP2 (ENSSTOG00000000789) Eurasian red squirrel MODERN SPECIES 5 ANTXR1 (ENSSVLG00005022150) #8 GKN1 (ENSSVLG00005022077) #9 GKN2 (ENSSVLG00005021978) #10 ENSSVLG00005021937 ##9 BMP10 (ENSSVLG00005021912) #11 ARHGAP25 (ENSSVLG00005021763) #12 PROKR1 (ENSSVLG00005021730) #14 ENSSVLG00005021708 APLF (ENSSVLG00005021663) #15 FBXO48 (ENSSVLG00005021637) #16 PLEK (ENSSVLG00005021563) #17 CNRIP1 (ENSSVLG00005021502) #18 PPP3R1 (ENSSVLG00005021432) #19 PNO1 (ENSSVLG00005021413) #20 DNAAF10 (ENSSVLG00005021285) #21 C1D (ENSSVLG00005021246) #22 ETAA1 (ENSSVLG00005021110) #24 MEIS1 (ENSSVLG00005020894) #25 ENSSVLG00005020854 SPRED2 (ENSSVLG00005020765) #28 ACTR2 (ENSSVLG00005020565) #29 ENSSVLG00005020476 #30 CEP68 (ENSSVLG00005020379) #31 SOWAHC (ENSSVLG00005020212) SEPTIN10 (ENSSVLG00005020034) SH3RF3 (ENSSVLG00005019900) EDAR (ENSSVLG00005019677) CCDC138 (ENSSVLG00005019503) RANBP2 (ENSSVLG00005018522) ENSSVLG00005018289 ENSSVLG00005018042 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.f #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.f #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Guinea pig DUPLICATION Guinea pig MODERN SPECIES 37 GFPT1 (ENSCPOG00000014259) #7 ANTXR1 (ENSCPOG00000009963) #8 GKN1 (ENSCPOG00000014181) #9 GKN2 (ENSCPOG00000014178) #10 ENSCPOG00000025285 ##9 BMP10 (ENSCPOG00000019825) #11 ARHGAP25 (ENSCPOG00000025943) #12 PROKR1 (ENSCPOG00000039175) #14 APLF (ENSCPOG00000003527) #15 FBXO48 (ENSCPOG00000030418) #16 PLEK (ENSCPOG00000003525) #17 CNRIP1 (ENSCPOG00000033555) #18 PPP3R1 (ENSCPOG00000036560) #19 PNO1 (ENSCPOG00000010130) #20 DNAAF10 (ENSCPOG00000010110) #21 ENSCPOG00000037986 #22 ETAA1 (ENSCPOG00000012749) #24 ENSCPOG00000001035 MEIS1 (ENSCPOG00000008177) #25 Guinea pig MODERN SPECIES 6 SLC46A3 (ENSCPOG00000015460) POMP (ENSCPOG00000001710) FLT1 (ENSCPOG00000013357) PAN3 (ENSCPOG00000013349) FLT3 (ENSCPOG00000007285) CDX2 (ENSCPOG00000007276) PDX1 (ENSCPOG00000024534) ENSCPOG00000026854 ENSCPOG00000033461 LNX2 (ENSCPOG00000010152) MTIF3 (ENSCPOG00000010148) GTF3A (ENSCPOG00000010143) RASL11A (ENSCPOG00000031264) ENSCPOG00000008784 USP12 (ENSCPOG00000005241) ENSCPOG00000020112 #22 WASF3 (ENSCPOG00000010156) CDK8 (ENSCPOG00000040435) RNF6 (ENSCPOG00000009120) SHISA2 (ENSCPOG00000009049) ATP8A2 (ENSCPOG00000032003) NUP58 (ENSCPOG00000012295) MTMR6 (ENSCPOG00000007270) AMER2 (ENSCPOG00000014858) ENSCPOG00000031549 ENSCPOG00000014970 ENSCPOG00000038067 ENSCPOG00000004523 MIPEP (ENSCPOG00000004508) TNFRSF19 (ENSCPOG00000012054) SACS (ENSCPOG00000038995) Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958.y #30 ENSGT00810000125473.A.f #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Long-tailed chinchilla MODERN SPECIES 131 ANTXR1 (ENSCLAG00000011983) #8 ENSCLAG00000010348 GKN1 (ENSCLAG00000010820) #9 GKN2 (ENSCLAG00000015981) #10 ENSCLAG00000007045 ##9 BMP10 (ENSCLAG00000007285) #11 ARHGAP25 (ENSCLAG00000007583) #12 PROKR1 (ENSCLAG00000008825) #14 APLF (ENSCLAG00000009519) #15 FBXO48 (ENSCLAG00000010201) #16 PLEK (ENSCLAG00000010835) #17 CNRIP1 (ENSCLAG00000012035) #18 PPP3R1 (ENSCLAG00000012159) #19 PNO1 (ENSCLAG00000015058) #20 DNAAF10 (ENSCLAG00000014702) #21 C1D (ENSCLAG00000011883) #22 ETAA1 (ENSCLAG00000013575) #24 MEIS1 (ENSCLAG00000010420) #25 SPRED2 (ENSCLAG00000011449) #28 ACTR2 (ENSCLAG00000010920) #29 RAB1A (ENSCLAG00000014766) #30 CEP68 (ENSCLAG00000012193) #31 SLC1A4 (ENSCLAG00000008207) #32 SERTAD2 (ENSCLAG00000008318) #33 AFTPH (ENSCLAG00000012032) #35 ENSCLAG00000012344 #34 LGALSL (ENSCLAG00000015114) #36 PELI1 (ENSCLAG00000006481) #37 VPS54 (ENSCLAG00000007366) UGP2 (ENSCLAG00000010416) MDH1 (ENSCLAG00000007815) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 252 ENSODEG00000019014 ENSODEG00000004065 UBQLN2 (ENSODEG00000004078) ENSODEG00000004091 FAAH2 (ENSODEG00000002562) ENSODEG00000002584 ENSODEG00000002601 SPIN4 (ENSODEG00000018809) ARHGEF9 (ENSODEG00000002707) ENSODEG00000002920 ENSODEG00000002930 ASB12 (ENSODEG00000002937) ENSODEG00000018865 ZC4H2 (ENSODEG00000002954) ENSODEG00000002966 ENSODEG00000018885 #22 ENSODEG00000002977 LAS1L (ENSODEG00000003001) ENSODEG00000003056 MSN (ENSODEG00000003097) HEPH (ENSODEG00000003182) ENSODEG00000002647 ENSODEG00000002660 Degu MODERN SPECIES 119 BMP10 (ENSODEG00000010621) #11 ARHGAP25 (ENSODEG00000012290) #12 PROKR1 (ENSODEG00000011030) #14 FBXO48 (ENSODEG00000011400) #16 PLEK (ENSODEG00000011044) #17 CNRIP1 (ENSODEG00000011175) #18 PPP3R1 (ENSODEG00000012397) #19 PNO1 (ENSODEG00000011769) #20 ENSODEG00000011043 #21 ENSODEG00000019812 ENSODEG00000011242 #22 MEIS1 (ENSODEG00000012314) #25 ENSODEG00000012312 SPRED2 (ENSODEG00000012243) #28 ENSODEG00000010956 #29 ENSODEG00000011248 #30 SLC1A4 (ENSODEG00000011406) #32 SERTAD2 (ENSODEG00000011523) #33 ENSODEG00000011805 #35 LGALSL (ENSODEG00000011485) #36 ENSODEG00000011901 PELI1 (ENSODEG00000011189) #37 VPS54 (ENSODEG00000012541) ENSODEG00000011552 ENSODEG00000012736 MDH1 (ENSODEG00000011582) Degu MODERN SPECIES 349 ENSODEG00000018525 #22 ENSODEG00000000080 ENSODEG00000000051 LDOC1 (ENSODEG00000018520) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 23 BMP10 (ENSHGLG00000036573) #11 ENSHGLG00000032377 ARHGAP25 (ENSHGLG00000018071) #12 ENSHGLG00000018073 PROKR1 (ENSHGLG00000034888) #14 ENSHGLG00000005135 APLF (ENSHGLG00000042896) #15 FBXO48 (ENSHGLG00000044023) #16 ENSHGLG00000000426 PLEK (ENSHGLG00000019154) #17 CNRIP1 (ENSHGLG00000045252) #18 ENSHGLG00000047583 PPP3R1 (ENSHGLG00000044041) #19 PNO1 (ENSHGLG00000045522) #20 DNAAF10 (ENSHGLG00000012153) #21 ENSHGLG00000012332 #22 ETAA1 (ENSHGLG00000040625) #24 ENSHGLG00000020742 MEIS1 (ENSHGLG00000012586) #25 ENSHGLG00000013407 ENSHGLG00000041829 ENSHGLG00000034618 ENSHGLG00000042711 #28 ENSHGLG00000037092 RAB1A (ENSHGLG00000045077) #30 CEP68 (ENSHGLG00000018361) #31 ENSHGLG00000048375 #31 SLC1A4 (ENSHGLG00000036619) #32 ENSHGLG00000049432 ENSHGLG00000047996 #33 ENSHGLG00000004348 #34 Naked mole-rat female MODERN SPECIES 25 PHAX (ENSHGLG00000004831) TEX43 (ENSHGLG00000004450) ENSHGLG00000049826 LMNB1 (ENSHGLG00000004108) MARCHF3 (ENSHGLG00000008182) ENSHGLG00000007860 ENSHGLG00000006892 MEGF10 (ENSHGLG00000004334) PRRC1 (ENSHGLG00000007825) CTXN3 (ENSHGLG00000033128) ENSHGLG00000006109 ENSHGLG00000040466 ENSHGLG00000017787 ENSHGLG00000035543 ENSHGLG00000016039 ENSHGLG00000021219 #22 ENSHGLG00000033624 ENSHGLG00000014868 ENSHGLG00000014826 ENSHGLG00000045516 ENSHGLG00000014767 ADAMTS19 (ENSHGLG00000015411) MINAR2 (ENSHGLG00000015376) ENSHGLG00000011633 ENSHGLG00000044750 ENSHGLG00000004498 ENSHGLG00000039649 ENSHGLG00000045312 ENSHGLG00000040996 ENSHGLG00000016330 ENSHGLG00000007766 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 10 PHTF1 (ENSHGLG00000015252) MAGI3 (ENSHGLG00000005209) ENSHGLG00000035626 LRIG2 (ENSHGLG00000016354) ENSHGLG00000016346 ENSHGLG00000034195 TAFA3 (ENSHGLG00000018506) PPM1J (ENSHGLG00000009548) RHOC (ENSHGLG00000032070) MOV10 (ENSHGLG00000004970) ENSHGLG00000045694 ST7L (ENSHGLG00000018040) WNT2B (ENSHGLG00000014959) ENSHGLG00000003197 ENSHGLG00000016608 ENSHGLG00000042226 #22 ENSHGLG00000017681 ENSHGLG00000038826 ENSHGLG00000017438 DDX20 (ENSHGLG00000014848) FAM212B (ENSHGLG00000032533) RAP1A (ENSHGLG00000008139) ADORA3 (ENSHGLG00000006832) ENSHGLG00000004637 ENSHGLG00000041308 ENSHGLG00000004364 WDR77 (ENSHGLG00000008077) ENSHGLG00000036915 PIFO (ENSHGLG00000048487) DENND2D (ENSHGLG00000007550) CEPT1 (ENSHGLG00000004650) Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000014562 ENSHGLG00000010731 ENSHGLG00000047297 MGRN1 (ENSHGLG00000010412) ENSHGLG00000009414 ENSHGLG00000041110 ENSHGLG00000006338 ENSHGLG00000047672 HMOX2 (ENSHGLG00000018687) NMRAL1 (ENSHGLG00000015280) DNAJA3 (ENSHGLG00000013833) CORO7 (ENSHGLG00000013215) VASN (ENSHGLG00000018390) ENSHGLG00000017996 TFAP4 (ENSHGLG00000013646) ENSHGLG00000034539 #22 SRL (ENSHGLG00000048431) ADCY9 (ENSHGLG00000048109) CREBBP (ENSHGLG00000005467) TRAP1 (ENSHGLG00000010156) DNASE1 (ENSHGLG00000006355) ENSHGLG00000038589 SLX4 (ENSHGLG00000011119) ENSHGLG00000015072 CLUAP1 (ENSHGLG00000014230) ENSHGLG00000042398 NAA60 (ENSHGLG00000017748) ENSHGLG00000042314 ZNF597 (ENSHGLG00000015048) ZNF174 (ENSHGLG00000045867) OR2C1 (ENSHGLG00000020935) Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Myomorpha ANCESTRAL SPECIES 24 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Muroidea ANCESTRAL SPECIES 21 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1297 ENSNGAG00000012482 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 681 ENSNGAG00000016675 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 859 Plek (ENSNGAG00000020332) #17 Cnrip1 (ENSNGAG00000019719) #18 Ppp3r1 (ENSNGAG00000012099) #19 Pno1 (ENSNGAG00000010165) #20 ENSNGAG00000003050 ENSNGAG00000011329 #21 ENSNGAG00000011872 #22 Etaa1 (ENSNGAG00000010247) #24 Meis1 (ENSNGAG00000013041) #25 Upper Galilee mountains blind mole rat MODERN SPECIES 1632 ENSNGAG00000014038 Fyn (ENSNGAG00000016902) ENSNGAG00000019953 ENSNGAG00000020681 ENSNGAG00000021428 ENSNGAG00000012433 ENSNGAG00000023631 ENSNGAG00000011554 ENSNGAG00000002531 ENSNGAG00000010243 ENSNGAG00000013330 ENSNGAG00000016951 Slc16a10 (ENSNGAG00000021488) Rpf2 (ENSNGAG00000009701) Gtf3c6 (ENSNGAG00000021709) ENSNGAG00000021902 #22 ENSNGAG00000022433 Cdk19 (ENSNGAG00000006946) ENSNGAG00000012844 Slc22a16 (ENSNGAG00000020774) Ddo (ENSNGAG00000022302) Mettl24 (ENSNGAG00000022579) Cdc40 (ENSNGAG00000023120) Wasf1 (ENSNGAG00000023356) Gpr6 (ENSNGAG00000012257) Fig4 (ENSNGAG00000024069) ENSNGAG00000017704 ENSNGAG00000019232 Zbtb24 (ENSNGAG00000021255) Mical1 (ENSNGAG00000023875) Smpd2 (ENSNGAG00000013670) Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Murinae ANCESTRAL SPECIES 12 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.s #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Mus ANCESTRAL SPECIES 14 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.s #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.s #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.s #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Mouse MODERN SPECIES 2 Ikzf1 (ENSMUSG00000018654) Fignl1 (ENSMUSG00000035455) Ddc (ENSMUSG00000020182) Grb10 (ENSMUSG00000020176) Cobl (ENSMUSG00000020173) Pom121l12 (ENSMUSG00000084135) Vstm2a (ENSMUSG00000048834) Sec61g (ENSMUSG00000078974) Egfr (ENSMUSG00000020122) Fbxo48 (ENSMUSG00000044966) #16 Plek (ENSMUSG00000020120) #17 Cnrip1 (ENSMUSG00000044629) #18 Ppp3r1 (ENSMUSG00000033953) #19 Dnaaf10 (ENSMUSG00000078970) #21 Pno1 (ENSMUSG00000020116) #20 C1d (ENSMUSG00000000581) #22 Etaa1 (ENSMUSG00000016984) #24 Meis1 (ENSMUSG00000020160) #25 Spred2 (ENSMUSG00000045671) #28 Actr2 (ENSMUSG00000020152) #29 Rab1a (ENSMUSG00000020149) #30 Cep68 (ENSMUSG00000044066) #31 Slc1a4 (ENSMUSG00000020142) #32 Sertad2 (ENSMUSG00000049800) #33 Aftph (ENSMUSG00000049659) #35 Lgalsl (ENSMUSG00000042363) #36 Peli1 (ENSMUSG00000020134) #37 Vps54 (ENSMUSG00000020128) Ugp2 (ENSMUSG00000001891) Mdh1 (ENSMUSG00000020321) Wdpcp (ENSMUSG00000020319) Mus_C ANCESTRAL SPECIES 3 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052.s #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 spretus MODERN SPECIES 2 Spata48 (MGP_SPRETEiJ_G0016937) Ikzf1 (MGP_SPRETEiJ_G0016938) Fignl1 (MGP_SPRETEiJ_G0016939) Ddc (MGP_SPRETEiJ_G0016940) Grb10 (MGP_SPRETEiJ_G0016941) Cobl (MGP_SPRETEiJ_G0016942) MGP_SPRETEiJ_G0016943 Sec61g (MGP_SPRETEiJ_G0016944) Egfr (MGP_SPRETEiJ_G0016945) Fbxo48 (MGP_SPRETEiJ_G0016946) #16 Plek (MGP_SPRETEiJ_G0016947) #17 MGP_SPRETEiJ_G0016948 #18 Ppp3r1 (MGP_SPRETEiJ_G0016949) #19 Dnaaf10 (MGP_SPRETEiJ_G0016950) #21 Pno1 (MGP_SPRETEiJ_G0016951) #20 C1d (MGP_SPRETEiJ_G0016952) #22 Etaa1 (MGP_SPRETEiJ_G0016953) #24 Meis1 (MGP_SPRETEiJ_G0016954) #25 Asb12 (MGP_SPRETEiJ_G0016955) Spred2 (MGP_SPRETEiJ_G0016956) #28 Actr2 (MGP_SPRETEiJ_G0016957) #29 Rab1a (MGP_SPRETEiJ_G0016958) #30 Cep68 (MGP_SPRETEiJ_G0016959) #31 Slc1a4 (MGP_SPRETEiJ_G0016960) #32 Sertad2 (MGP_SPRETEiJ_G0016961) #33 Aftph (MGP_SPRETEiJ_G0016962) #35 Lgalsl (MGP_SPRETEiJ_G0016963) #36 Peli1 (MGP_SPRETEiJ_G0016964) #37 Vps54 (MGP_SPRETEiJ_G0016965) Ugp2 (MGP_SPRETEiJ_G0016966) Mdh1 (MGP_SPRETEiJ_G0016967) Steppe mouse MODERN SPECIES 2972 ENSMSIG00000001187 ENSMSIG00000001156 Egfr (ENSMSIG00000001122) Fbxo48 (ENSMSIG00000001105) #16 Plek (ENSMSIG00000001053) #17 ENSMSIG00000001023 #18 ENSMSIG00000000988 #19 ENSMSIG00000000962 #20 Dnaaf10 (ENSMSIG00000000934) #21 C1d (ENSMSIG00000000910) #22 Etaa1 (ENSMSIG00000000849) #24 ENSMSIG00000000838 Ryukyu mouse MODERN SPECIES 2 Spata48 (MGP_CAROLIEiJ_G0016095) Ikzf1 (MGP_CAROLIEiJ_G0016096) Fignl1 (MGP_CAROLIEiJ_G0016097) Ddc (MGP_CAROLIEiJ_G0016098) Grb10 (MGP_CAROLIEiJ_G0016099) Cobl (MGP_CAROLIEiJ_G0016100) MGP_CAROLIEiJ_G0016101 Sec61g (MGP_CAROLIEiJ_G0016102) Egfr (MGP_CAROLIEiJ_G0016103) Fbxo48 (MGP_CAROLIEiJ_G0016104) #16 Plek (MGP_CAROLIEiJ_G0016105) #17 Cnrip1 (MGP_CAROLIEiJ_G0016106) #18 Ppp3r1 (MGP_CAROLIEiJ_G0016107) #19 Dnaaf10 (MGP_CAROLIEiJ_G0016108) #21 Pno1 (MGP_CAROLIEiJ_G0016109) #20 C1d (MGP_CAROLIEiJ_G0016110) #22 Etaa1 (MGP_CAROLIEiJ_G0016111) #24 Meis1 (MGP_CAROLIEiJ_G0016112) #25 Spred2 (MGP_CAROLIEiJ_G0016113) #28 Actr2 (MGP_CAROLIEiJ_G0016114) #29 Rab1a (MGP_CAROLIEiJ_G0016115) #30 Cep68 (MGP_CAROLIEiJ_G0016116) #31 Slc1a4 (MGP_CAROLIEiJ_G0016117) #32 Sertad2 (MGP_CAROLIEiJ_G0016118) #33 Aftph (MGP_CAROLIEiJ_G0016119) #35 Gm5065 (MGP_CAROLIEiJ_G0016120) #36 Peli1 (MGP_CAROLIEiJ_G0016121) #37 Vps54 (MGP_CAROLIEiJ_G0016122) Ugp2 (MGP_CAROLIEiJ_G0016123) Mdh1 (MGP_CAROLIEiJ_G0016124) Wdpcp (MGP_CAROLIEiJ_G0016125) Shrew mouse MODERN SPECIES 4 Spata48 (MGP_PahariEiJ_G0016796) Ikzf1 (MGP_PahariEiJ_G0016795) Fignl1 (MGP_PahariEiJ_G0016794) Ddc (MGP_PahariEiJ_G0016793) Grb10 (MGP_PahariEiJ_G0016792) Cobl (MGP_PahariEiJ_G0016791) MGP_PahariEiJ_G0016790 Sec61g (MGP_PahariEiJ_G0016789) Egfr (MGP_PahariEiJ_G0016788) Fbxo48 (MGP_PahariEiJ_G0016787) #16 Plek (MGP_PahariEiJ_G0016786) #17 MGP_PahariEiJ_G0016785 #18 Ppp3r1 (MGP_PahariEiJ_G0016784) #19 Pno1 (MGP_PahariEiJ_G0016783) #20 Dnaaf10 (MGP_PahariEiJ_G0016782) #21 C1d (MGP_PahariEiJ_G0016781) #22 Etaa1 (MGP_PahariEiJ_G0016780) #24 Meis1 (MGP_PahariEiJ_G0016779) #25 Spred2 (MGP_PahariEiJ_G0016778) #28 Actr2 (MGP_PahariEiJ_G0016777) #29 Rab1a (MGP_PahariEiJ_G0016776) #30 Cep68 (MGP_PahariEiJ_G0016775) #31 Slc1a4 (MGP_PahariEiJ_G0016774) #32 Sertad2 (MGP_PahariEiJ_G0016773) #33 Aftph (MGP_PahariEiJ_G0016772) #35 Lgalsl (MGP_PahariEiJ_G0016771) #36 MGP_PahariEiJ_G0016770 #36 Peli1 (MGP_PahariEiJ_G0016769) #37 Vps54 (MGP_PahariEiJ_G0016768) Ugp2 (MGP_PahariEiJ_G0016767) Mdh1 (MGP_PahariEiJ_G0016766) Rat MODERN SPECIES 5 Zpbp (ENSRNOG00000027801) Spata48 (ENSRNOG00000037621) Ikzf1 (ENSRNOG00000004444) Fignl1 (ENSRNOG00000004440) Ddc (ENSRNOG00000004327) Grb10 (ENSRNOG00000004290) Cobl (ENSRNOG00000004281) LOC100361025 (ENSRNOG00000004090) Vstm2a (ENSRNOG00000005180) Sec61g (ENSRNOG00000005203) Egfr (ENSRNOG00000004332) Fbxo48 (ENSRNOG00000023026) #16 Plek (ENSRNOG00000005214) #17 Cnrip1 (ENSRNOG00000005326) #18 Pno1 (ENSRNOG00000005524) #20 C1d (ENSRNOG00000005982) #22 Hnrnpk-ps1 (ENSRNOG00000063529) Etaa1l1 (ENSRNOG00000006185) #24 Meis1 (ENSRNOG00000004606) #25 Spred2 (ENSRNOG00000004888) #28 Actr2 (ENSRNOG00000004959) #29 AABR07016566.1 (ENSRNOG00000051648) ENSRNOG00000070133 Rpl38 (ENSRNOG00000033686) Rab1a (ENSRNOG00000004992) #30 Cep68 (ENSRNOG00000027282) #31 Slc1a4 (ENSRNOG00000005248) #32 Sertad2 (ENSRNOG00000005393) #33 Aftph (ENSRNOG00000005411) #35 LOC108352861 (ENSRNOG00000029052) Lgalsl (ENSRNOG00000005464) #36 Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Cricetinae ANCESTRAL SPECIES 37 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Chinese hamster chok1gshd MODERN SPECIES 121 Ikzf1 (ENSCGRG00001015985) Fignl1 (ENSCGRG00001005568) Ddc (ENSCGRG00001020321) Grb10 (ENSCGRG00001018605) Cobl (ENSCGRG00001015912) ENSCGRG00001016899 Vstm2a (ENSCGRG00001018623) ENSCGRG00001010828 Egfr (ENSCGRG00001020721) Fbxo48 (ENSCGRG00001017787) #16 Plek (ENSCGRG00001023663) #17 Cnrip1 (ENSCGRG00001014944) #18 Ppp3r1 (ENSCGRG00001020769) #19 ENSCGRG00001007472 #20 ENSCGRG00001017610 #21 C1d (ENSCGRG00001023376) #22 Etaa1 (ENSCGRG00001020354) #24 Meis1 (ENSCGRG00001009447) #25 Spred2 (ENSCGRG00001015924) #28 ENSCGRG00001017243 #29 ENSCGRG00001012691 #30 Cep68 (ENSCGRG00001014327) #31 Slc1a4 (ENSCGRG00001017715) #32 ENSCGRG00001005474 Sertad2 (ENSCGRG00001009657) #33 Aftph (ENSCGRG00001016162) #35 ENSCGRG00001009126 #34 Gm5065 (ENSCGRG00001013868) #36 Peli1 (ENSCGRG00001021958) #37 Vps54 (ENSCGRG00001009286) UGP2 (ENSCGRG00001012845) Golden Hamster MODERN SPECIES 639 Prep (ENSMAUG00000009728) Popdc3 (ENSMAUG00000000723) Bves (ENSMAUG00000001250) Lin28b (ENSMAUG00000006523) Hace1 (ENSMAUG00000012759) Grik2 (ENSMAUG00000012525) Ascc3 (ENSMAUG00000018304) Sim1 (ENSMAUG00000021356) Egfr (ENSMAUG00000000581) Fbxo48 (ENSMAUG00000020533) #16 Plek (ENSMAUG00000011299) #17 Cnrip1 (ENSMAUG00000019592) #18 Ppp3r1 (ENSMAUG00000014614) #19 Pno1 (ENSMAUG00000014995) #20 Dnaaf10 (ENSMAUG00000011603) #21 C1d (ENSMAUG00000008974) #22 Etaa1 (ENSMAUG00000010594) #24 Meis1 (ENSMAUG00000001130) #25 Spred2 (ENSMAUG00000013657) #28 Actr2 (ENSMAUG00000008458) #29 Rab1a (ENSMAUG00000012156) #30 Cep68 (ENSMAUG00000014820) #31 Slc1a4 (ENSMAUG00000019775) #32 Sertad2 (ENSMAUG00000004242) #33 Aftph (ENSMAUG00000016557) #35 ENSMAUG00000015033 #36 Peli1 (ENSMAUG00000012937) #37 Vps54 (ENSMAUG00000010788) ENSMAUG00000012689 Mdh1 (ENSMAUG00000018086) ENSMAUG00000012018 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 1 Fignl1 (ENSPEMG00000006051) Ddc (ENSPEMG00000006473) Grb10 (ENSPEMG00000014827) Cobl (ENSPEMG00000012700) ENSPEMG00000027900 ENSPEMG00000030198 Vstm2a (ENSPEMG00000028365) Sec61g (ENSPEMG00000020941) Egfr (ENSPEMG00000012745) Fbxo48 (ENSPEMG00000023069) #16 Plek (ENSPEMG00000022796) #17 Cnrip1 (ENSPEMG00000031287) #18 Ppp3r1 (ENSPEMG00000021806) #19 Pno1 (ENSPEMG00000022989) #20 Dnaaf10 (ENSPEMG00000022118) #21 ENSPEMG00000026465 #22 Etaa1 (ENSPEMG00000011918) #24 Meis1 (ENSPEMG00000008113) #25 ENSPEMG00000012914 ENSPEMG00000028236 Spred2 (ENSPEMG00000029042) #28 Actr2 (ENSPEMG00000015727) #29 ENSPEMG00000025517 Rab1a (ENSPEMG00000009340) #30 Cep68 (ENSPEMG00000002161) #31 Slc1a4 (ENSPEMG00000018063) #32 ENSPEMG00000016241 Sertad2 (ENSPEMG00000027852) #33 Aftph (ENSPEMG00000010156) #35 ENSPEMG00000015267 #36 Peli1 (ENSPEMG00000030617) #37 Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000028727 S100a11 (ENSPEMG00000027141) Tchhl1 (ENSPEMG00000023251) ENSPEMG00000009460 ENSPEMG00000029220 ENSPEMG00000027135 Crnn (ENSPEMG00000015891) Lce1m (ENSPEMG00000028998) Crct1 (ENSPEMG00000025851) ENSPEMG00000025047 ENSPEMG00000030519 ENSPEMG00000028390 ENSPEMG00000024567 ENSPEMG00000007888 Kprp (ENSPEMG00000003567) ENSPEMG00000002108 #22 ENSPEMG00000030283 Lce1c (ENSPEMG00000028111) Lce1a2 (ENSPEMG00000029139) ENSPEMG00000026947 ENSPEMG00000007711 Lce6a (ENSPEMG00000016704) 2210017I01Rik (ENSPEMG00000024783) Smcp (ENSPEMG00000015179) ENSPEMG00000019081 2310046K23Rik (ENSPEMG00000006761) Sprr4 (ENSPEMG00000007005) Sprr1a (ENSPEMG00000024164) Sprr3 (ENSPEMG00000009049) ENSPEMG00000007864 ENSPEMG00000008123 Prairie vole MODERN SPECIES 92 Pom121l12 (ENSMOCG00000017420) ENSMOCG00000002960 Vstm2a (ENSMOCG00000004039) ENSMOCG00000001784 ENSMOCG00000004092 Egfr (ENSMOCG00000000900) Fbxo48 (ENSMOCG00000015915) #16 Plek (ENSMOCG00000018168) #17 Cnrip1 (ENSMOCG00000004432) #18 Ppp3r1 (ENSMOCG00000012867) #19 Pno1 (ENSMOCG00000017268) #20 Dnaaf10 (ENSMOCG00000000313) #21 C1d (ENSMOCG00000010860) #22 Etaa1 (ENSMOCG00000018537) #24 Meis1 (ENSMOCG00000016359) #25 Spred2 (ENSMOCG00000014005) #28 Actr2 (ENSMOCG00000008248) #29 Rab1a (ENSMOCG00000017022) #30 Cep68 (ENSMOCG00000003444) #31 Slc1a4 (ENSMOCG00000001173) #32 Sertad2 (ENSMOCG00000002173) #33 Aftph (ENSMOCG00000015081) #35 ENSMOCG00000003932 #34 Gm5065 (ENSMOCG00000014300) #36 Peli1 (ENSMOCG00000016437) #37 Vps54 (ENSMOCG00000009563) Ugp2 (ENSMOCG00000009715) Mdh1 (ENSMOCG00000015448) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 60 ENSJJAG00000017667 Plaat3 (ENSJJAG00000021915) Lgals12 (ENSJJAG00000014881) Plaat5 (ENSJJAG00000020253) ENSJJAG00000010614 Slc22a8 (ENSJJAG00000023072) Slc22a6 (ENSJJAG00000009093) Chrm1 (ENSJJAG00000013856) ENSJJAG00000001125 Wdr74 (ENSJJAG00000001449) Stx5a (ENSJJAG00000023191) Nxf1 (ENSJJAG00000017480) Tmem223 (ENSJJAG00000020948) Tmem179b (ENSJJAG00000010561) Taf6l (ENSJJAG00000017255) ENSJJAG00000009540 #22 Polr2g (ENSJJAG00000005019) Zbtb3 (ENSJJAG00000024243) ENSJJAG00000008957 Hnrnpul2 (ENSJJAG00000011206) Gng3 (ENSJJAG00000015400) ENSJJAG00000019301 Ubxn1 (ENSJJAG00000012631) Uqcc3 (ENSJJAG00000022865) ENSJJAG00000011273 1810009A15Rik (ENSJJAG00000010598) Ints5 (ENSJJAG00000013000) Ganab (ENSJJAG00000024016) B3gat3 (ENSJJAG00000023873) Rom1 (ENSJJAG00000016209) Eml3 (ENSJJAG00000001007) Lesser Egyptian jerboa MODERN SPECIES 74 Hnrnpll (ENSJJAG00000024192) Kidins220 (ENSJJAG00000015011) Mboat2 (ENSJJAG00000011516) Asap2 (ENSJJAG00000001039) Itgb1bp1 (ENSJJAG00000022716) Cpsf3 (ENSJJAG00000023415) Iah1 (ENSJJAG00000015466) Adam17 (ENSJJAG00000020057) Ywhaq (ENSJJAG00000008194) ENSJJAG00000011210 #16 Plek (ENSJJAG00000005757) #17 Cnrip1 (ENSJJAG00000016204) #18 Ppp3r1 (ENSJJAG00000016869) #19 Pno1 (ENSJJAG00000022862) #20 Dnaaf10 (ENSJJAG00000019935) #21 ENSJJAG00000023186 #22 ENSJJAG00000021064 ENSJJAG00000011226 #24 Meis1 (ENSJJAG00000015459) #25 Spred2 (ENSJJAG00000020977) #28 Actr2 (ENSJJAG00000008642) #29 Rab1a (ENSJJAG00000014396) #30 Cep68 (ENSJJAG00000016421) #31 Slc1a4 (ENSJJAG00000002418) #32 Sertad2 (ENSJJAG00000015989) #33 ENSJJAG00000020384 #35 Gm5065 (ENSJJAG00000016772) #36 Peli1 (ENSJJAG00000000296) #37 Vps54 (ENSJJAG00000012401) Ugp2 (ENSJJAG00000014432) Mdh1 (ENSJJAG00000024369) Lesser Egyptian jerboa MODERN SPECIES 59 Gpt (ENSJJAG00000005755) Mfsd3 (ENSJJAG00000014614) Recql4 (ENSJJAG00000017588) Lrrc14 (ENSJJAG00000013498) Lrrc24 (ENSJJAG00000020237) C030006K11Rik (ENSJJAG00000019946) ENSJJAG00000014100 ENSJJAG00000015424 ENSJJAG00000023749 ENSJJAG00000016143 ENSJJAG00000006705 ENSJJAG00000008974 Zfp647 (ENSJJAG00000012017) ENSJJAG00000000364 Lratd2 (ENSJJAG00000010787) ENSJJAG00000016086 #22 Myc (ENSJJAG00000012619) ENSJJAG00000021929 ENSJJAG00000023137 Cyrib (ENSJJAG00000016929) Asap1 (ENSJJAG00000012834) ENSJJAG00000010599 Adcy8 (ENSJJAG00000018781) ENSJJAG00000019381 ENSJJAG00000022288 ENSJJAG00000018526 Efr3a (ENSJJAG00000023636) ENSJJAG00000018417 Oc90 (ENSJJAG00000018951) Hhla1 (ENSJJAG00000010797) Kcnq3 (ENSJJAG00000004354) Lesser Egyptian jerboa MODERN SPECIES 62 Ing2 (ENSJJAG00000022521) ENSJJAG00000022133 Trappc11 (ENSJJAG00000021365) Dlc1 (ENSJJAG00000015251) Sgcz (ENSJJAG00000017689) Tusc3 (ENSJJAG00000017924) ENSJJAG00000020899 Msr1 (ENSJJAG00000010232) ENSJJAG00000015563 ENSJJAG00000000989 Slc25a31 (ENSJJAG00000024076) ENSJJAG00000024038 Hspa4l (ENSJJAG00000003598) ENSJJAG00000022058 ENSJJAG00000023142 ENSJJAG00000005044 #22 Mfsd8 (ENSJJAG00000010896) Larp1b (ENSJJAG00000022360) Kangaroo rat MODERN SPECIES 382 Gfpt1 (ENSDORG00000015980) #7 Antxr1 (ENSDORG00000026824) #8 Gkn1 (ENSDORG00000013219) #9 Gkn2 (ENSDORG00000015532) #10 Gkn3 (ENSDORG00000029528) ##9 Bmp10 (ENSDORG00000012857) #11 Arhgap25 (ENSDORG00000012856) #12 ENSDORG00000012853 #14 Aplf (ENSDORG00000011241) #15 Fbxo48 (ENSDORG00000011239) #16 Plek (ENSDORG00000029923) #17 Cnrip1 (ENSDORG00000025749) #18 Ppp3r1 (ENSDORG00000024931) #19 ENSDORG00000006867 #20 Dnaaf10 (ENSDORG00000006862) #21 C1d (ENSDORG00000003300) #22 Meis1 (ENSDORG00000008334) #25 Spred2 (ENSDORG00000012174) #28 Actr2 (ENSDORG00000001487) #29 ENSDORG00000028628 #30 Cep68 (ENSDORG00000002111) #31 Slc1a4 (ENSDORG00000002394) #32 Sertad2 (ENSDORG00000025954) #33 ENSDORG00000027058 #34 ENSDORG00000004159 #35 ENSDORG00000027919 #36 Peli1 (ENSDORG00000025404) #37 Vps54 (ENSDORG00000009782) Ugp2 (ENSDORG00000013164) Rasl2-9 (ENSDORG00000027038) Mdh1 (ENSDORG00000000099) Lagomorpha ANCESTRAL SPECIES 10 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.lb.a #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Pika MODERN SPECIES 4384 APLF (ENSOPRG00000009700) #15 FBXO48 (ENSOPRG00000009690) #16 PLEK (ENSOPRG00000009671) #17 CNRIP1 (ENSOPRG00000009658) #18 PNO1 (ENSOPRG00000009643) #20 ENSOPRG00000009593 #21 C1D (ENSOPRG00000009586) #22 Rabbit DUPLICATION Rabbit DUPLICATION Rabbit DUPLICATION Rabbit MODERN SPECIES SLC31A2 (ENSOCUG00000026691) ZFP37 (ENSOCUG00000029203) ENSOCUG00000026544 SLC46A2 (ENSOCUG00000009840) SNX30 (ENSOCUG00000009834) INIP (ENSOCUG00000016717) KIAA1958 (ENSOCUG00000016711) HSDL2 (ENSOCUG00000016808) PTBP3 (ENSOCUG00000017670) SUSD1 (ENSOCUG00000010435) ENSOCUG00000021292 UGCG (ENSOCUG00000014366) SHOC1 (ENSOCUG00000016284) ENSOCUG00000031538 DNAJC25 (ENSOCUG00000008533) ENSOCUG00000025587 #22 PTGR1 (ENSOCUG00000004879) ENSOCUG00000004283 ENSOCUG00000030397 ECPAS (ENSOCUG00000004268) ENSOCUG00000036935 LPAR1 (ENSOCUG00000026842) MUSK (ENSOCUG00000017885) SVEP1 (ENSOCUG00000016227) ENSOCUG00000029370 TXN (ENSOCUG00000030643) C9orf152 (ENSOCUG00000025279) ENSOCUG00000025387 PTPN3 (ENSOCUG00000001034) ENSOCUG00000039438 EPB41L4B (ENSOCUG00000016177) Rabbit MODERN SPECIES 11 GFPT1 (ENSOCUG00000029568) #7 ANTXR1 (ENSOCUG00000010232) #8 GKN1 (ENSOCUG00000010230) #9 ENSOCUG00000010225 #10 ENSOCUG00000024440 ##9 BMP10 (ENSOCUG00000010221) #11 ARHGAP25 (ENSOCUG00000010212) #12 PROKR1 (ENSOCUG00000026978) #14 APLF (ENSOCUG00000006121) #15 FBXO48 (ENSOCUG00000006116) #16 PLEK (ENSOCUG00000006113) #17 CNRIP1 (ENSOCUG00000006109) #18 PPP3R1 (ENSOCUG00000027562) #19 ENSOCUG00000006100 #20 DNAAF10 (ENSOCUG00000006087) #21 ENSOCUG00000009771 #22 ETAA1 (ENSOCUG00000001812) #24 MEIS1 (ENSOCUG00000001842) #25 ENSOCUG00000034052 SPRED2 (ENSOCUG00000004913) #28 ACTR2 (ENSOCUG00000004906) #29 RAB1A (ENSOCUG00000017003) #30 CEP68 (ENSOCUG00000016996) #31 ENSOCUG00000010821 #32 SERTAD2 (ENSOCUG00000008192) #33 AFTPH (ENSOCUG00000006390) #35 LGALSL (ENSOCUG00000013957) #36 ENSOCUG00000031191 PELI1 (ENSOCUG00000027961) #37 VPS54 (ENSOCUG00000002143) ENSOCUG00000002137 Rabbit MODERN SPECIES 1401 RTL5 (ENSOCUG00000008707) PIN4 (ENSOCUG00000008715) ERCC6L (ENSOCUG00000008724) ENSOCUG00000015749 ENSOCUG00000013315 HDAC8 (ENSOCUG00000013317) PHKA1 (ENSOCUG00000024271) ENSOCUG00000024072 ENSOCUG00000029608 ENSOCUG00000025806 ENSOCUG00000002565 NAP1L2 (ENSOCUG00000007414) ENSOCUG00000027857 CDX4 (ENSOCUG00000013356) CHIC1 (ENSOCUG00000009801) ENSOCUG00000024276 #22 ENSOCUG00000021083 ENSOCUG00000014764 SLC25A53 (ENSOCUG00000003541) FAM199X (ENSOCUG00000014228) ENSOCUG00000029369 ENSOCUG00000024906 IL1RAPL2 (ENSOCUG00000002614) ENSOCUG00000035301 ENSOCUG00000031682 NRK (ENSOCUG00000002624) SERPINA7 (ENSOCUG00000017102) PWWP3B (ENSOCUG00000009133) RADX (ENSOCUG00000012521) RNF128 (ENSOCUG00000012328) TBC1D8B (ENSOCUG00000012340) Rabbit MODERN SPECIES 12 RAD51B (ENSOCUG00000000597) ZFYVE26 (ENSOCUG00000000593) RDH12 (ENSOCUG00000000592) RDH11 (ENSOCUG00000000590) VTI1B (ENSOCUG00000000586) ARG2 (ENSOCUG00000000584) PIGH (ENSOCUG00000000583) PLEKHH1 (ENSOCUG00000000574) ENSOCUG00000008623 PLEK2 (ENSOCUG00000012031) EIF2S1 (ENSOCUG00000012023) ATP6V1D (ENSOCUG00000012018) PALS1 (ENSOCUG00000012009) GARIN2 (ENSOCUG00000016396) GPHN (ENSOCUG00000000898) ENSOCUG00000034313 #22 CCDC196 (ENSOCUG00000025913) FUT8 (ENSOCUG00000004667) MAX (ENSOCUG00000014439) ENSOCUG00000014429 ENSOCUG00000037657 ENSOCUG00000013411 CCDC175 (ENSOCUG00000013421) LRRC9 (ENSOCUG00000002335) PCNX4 (ENSOCUG00000029440) DHRS7 (ENSOCUG00000002249) PPM1A (ENSOCUG00000009955) C14orf39 (ENSOCUG00000004745) ENSOCUG00000038439 SIX6 (ENSOCUG00000004752) SIX1 (ENSOCUG00000014268) Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000153876.B ENSGT00390000003682 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000155078.a.b.a.b ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000015405 #22 Common shrew MODERN SPECIES 6884 ENSSARG00000003913 #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Artiodactyla ANCESTRAL SPECIES 16 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Suina ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Chacoan peccary MODERN SPECIES 777 GFPT1 (ENSCWAG00000017830) #7 ANTXR1 (ENSCWAG00000017786) #8 GKN1 (ENSCWAG00000017744) #9 GKN2 (ENSCWAG00000017675) #10 ENSCWAG00000017631 ##9 BMP10 (ENSCWAG00000017602) #11 ARHGAP25 (ENSCWAG00000017415) #12 PROKR1 (ENSCWAG00000017385) #14 APLF (ENSCWAG00000017353) #15 FBXO48 (ENSCWAG00000017325) #16 PLEK (ENSCWAG00000017263) #17 CNRIP1 (ENSCWAG00000017220) #18 PPP3R1 (ENSCWAG00000017182) #19 PNO1 (ENSCWAG00000017164) #20 DNAAF10 (ENSCWAG00000017128) #21 C1D (ENSCWAG00000017088) #22 ETAA1 (ENSCWAG00000017059) #24 MEIS1 (ENSCWAG00000016382) #25 SPRED2 (ENSCWAG00000016216) #28 ENSCWAG00000016192 #27 ACTR2 (ENSCWAG00000016124) #29 ENSCWAG00000016093 RAB1A (ENSCWAG00000016000) #30 CEP68 (ENSCWAG00000015895) #31 SLC1A4 (ENSCWAG00000015836) #32 SERTAD2 (ENSCWAG00000015818) #33 AFTPH (ENSCWAG00000015787) #35 LGALSL (ENSCWAG00000015689) #36 PELI1 (ENSCWAG00000015638) #37 VPS54 (ENSCWAG00000015086) UGP2 (ENSCWAG00000014887) Pig DUPLICATION Pig MODERN SPECIES 11 GFPT1 (ENSSSCG00000008339) #7 ANTXR1 (ENSSSCG00000008340) #8 GKN1 (ENSSSCG00000035529) #9 GKN2 (ENSSSCG00000038802) #10 GKN3 (ENSSSCG00000037028) ##9 BMP10 (ENSSSCG00000032071) #11 ARHGAP25 (ENSSSCG00000008344) #12 PROKR1 (ENSSSCG00000038148) #14 APLF (ENSSSCG00000008346) #15 FBXO48 (ENSSSCG00000008347) #16 PLEK (ENSSSCG00000008348) #17 CNRIP1 (ENSSSCG00000008349) #18 PPP3R1 (ENSSSCG00000036115) #19 PNO1 (ENSSSCG00000008352) #20 DNAAF10 (ENSSSCG00000008353) #21 C1D (ENSSSCG00000039331) #22 ETAA1 (ENSSSCG00000023908) #24 MEIS1 (ENSSSCG00000039161) #25 ENSSSCG00000044348 SPRED2 (ENSSSCG00000008357) #28 ACTR2 (ENSSSCG00000008358) #29 RAB1A (ENSSSCG00000008359) #30 CEP68 (ENSSSCG00000008360) #31 SLC1A4 (ENSSSCG00000028282) #32 SERTAD2 (ENSSSCG00000037002) #33 AFTPH (ENSSSCG00000008363) #35 LGALSL (ENSSSCG00000030005) #36 PELI1 (ENSSSCG00000028947) #37 VPS54 (ENSSSCG00000027509) UGP2 (ENSSSCG00000008368) MDH1 (ENSSSCG00000025751) Pig MODERN SPECIES 10 MRPL16 (ENSSSCG00000013118) CBLIF (ENSSSCG00000013117) TCN1 (ENSSSCG00000039252) OOSP3 (ENSSSCG00000048002) ENSSSCG00000061888 ENSSSCG00000055543 OOSP2 (ENSSSCG00000039560) MS4A2 (ENSSSCG00000034506) ENSSSCG00000013100 ENSSSCG00000041746 ENSSSCG00000051873 MS4A7 (ENSSSCG00000013102) ENSSSCG00000022114 MS4A5 (ENSSSCG00000026796) MS4A1 (ENSSSCG00000021812) ENSSSCG00000035701 #22 MS4A12 (ENSSSCG00000027387) MS4A13 (ENSSSCG00000032893) ENSSSCG00000057843 ENSSSCG00000031637 MS4A8 (ENSSSCG00000030879) MS4A15 (ENSSSCG00000034847) MS4A10 (ENSSSCG00000037987) CCDC86 (ENSSSCG00000013105) PTGDR2 (ENSSSCG00000013106) PRPF19 (ENSSSCG00000013107) TMEM109 (ENSSSCG00000013110) TMEM132A (ENSSSCG00000013113) SLC15A3 (ENSSSCG00000013114) CD6 (ENSSSCG00000013111) CD5 (ENSSSCG00000013115) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Camelidae ANCESTRAL SPECIES 12 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Alpaca MODERN SPECIES 903 PPP3R1 (ENSVPAG00000015522) #19 PNO1 (ENSVPAG00000012083) #20 DNAAF10 (ENSVPAG00000012082) #21 C1D (ENSVPAG00000012080) #22 ETAA1 (ENSVPAG00000012078) #24 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 6 GFPT1 (ENSCDRG00005008607) #7 ANTXR1 (ENSCDRG00005008451) #8 GKN1 (ENSCDRG00005008384) #9 GKN2 (ENSCDRG00005008314) #10 ENSCDRG00005008263 ##9 BMP10 (ENSCDRG00005008228) #11 ARHGAP25 (ENSCDRG00005008103) #12 PROKR1 (ENSCDRG00005008059) #14 APLF (ENSCDRG00005007995) #15 FBXO48 (ENSCDRG00005007956) #16 PLEK (ENSCDRG00005007914) #17 CNRIP1 (ENSCDRG00005007885) #18 PPP3R1 (ENSCDRG00005007714) #19 PNO1 (ENSCDRG00005007641) #20 DNAAF10 (ENSCDRG00005007600) #21 C1D (ENSCDRG00005007559) #22 ETAA1 (ENSCDRG00005007526) #24 ENSCDRG00005007509 MEIS1 (ENSCDRG00005006803) #25 SPRED2 (ENSCDRG00005006696) #28 ACTR2 (ENSCDRG00005006571) #29 RAB1A (ENSCDRG00005006403) #30 CEP68 (ENSCDRG00005006344) #31 SLC1A4 (ENSCDRG00005006273) #32 AFTPH (ENSCDRG00005006174) #35 LGALSL (ENSCDRG00005006106) #36 PELI1 (ENSCDRG00005006069) #37 VPS54 (ENSCDRG00005005842) UGP2 (ENSCDRG00005005735) MDH1 (ENSCDRG00005005489) WDPCP (ENSCDRG00005005228) Arabian camel MODERN SPECIES 11 FGF5 (ENSCDRG00005002376) CFAP299 (ENSCDRG00005002389) BMP3 (ENSCDRG00005002412) PRKG2 (ENSCDRG00005002430) RASGEF1B (ENSCDRG00005002503) HNRNPD (ENSCDRG00005002738) HNRNPDL (ENSCDRG00005002963) ENOPH1 (ENSCDRG00005003055) TMEM150C (ENSCDRG00005003088) SCD5 (ENSCDRG00005003107) SEC31A (ENSCDRG00005003191) THAP9 (ENSCDRG00005003500) LIN54 (ENSCDRG00005003557) COPS4 (ENSCDRG00005003685) PLAC8 (ENSCDRG00005003743) ENSCDRG00005003768 #22 ENSCDRG00005003781 COQ2 (ENSCDRG00005003800) HPSE (ENSCDRG00005003833) HELQ (ENSCDRG00005004047) MRPS18C (ENSCDRG00005004460) ABRAXAS1 (ENSCDRG00005004488) GPAT3 (ENSCDRG00005004508) ENSCDRG00005004525 ENSCDRG00005004541 CDS1 (ENSCDRG00005004562) WDFY3 (ENSCDRG00005004624) ENSCDRG00005005241 ARHGAP24 (ENSCDRG00005005261) ##12 MAPK10 (ENSCDRG00005005394) PTPN13 (ENSCDRG00005005955) Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.gb.b ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Pecora ANCESTRAL SPECIES 5 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Yarkand deer MODERN SPECIES 2 NFU1 (ENSCHYG00000011141) GFPT1 (ENSCHYG00000010734) #7 ANTXR1 (ENSCHYG00000010456) #8 GKN1 (ENSCHYG00000010366) #9 GKN2 (ENSCHYG00000010314) #10 ENSCHYG00000010229 ##9 BMP10 (ENSCHYG00000010198) #11 ARHGAP25 (ENSCHYG00000009972) #12 PROKR1 (ENSCHYG00000009894) #14 ENSCHYG00000009477 #15 FBXO48 (ENSCHYG00000009420) #16 PLEK (ENSCHYG00000009350) #17 CNRIP1 (ENSCHYG00000009217) #18 PNO1 (ENSCHYG00000009166) #20 ENSCHYG00000008783 #21 C1D (ENSCHYG00000008709) #22 ETAA1 (ENSCHYG00000008673) #24 MEIS1 (ENSCHYG00000008476) #25 ENSCHYG00000008453 SPRED2 (ENSCHYG00000008346) #28 ACTR2 (ENSCHYG00000008112) #29 RAB1A (ENSCHYG00000007988) #30 CEP68 (ENSCHYG00000007916) #31 SLC1A4 (ENSCHYG00000007819) #32 ENSCHYG00000007790 SERTAD2 (ENSCHYG00000007769) #33 ENSCHYG00000007734 AFTPH (ENSCHYG00000007630) #35 LGALSL (ENSCHYG00000007576) #36 ENSCHYG00000007544 PELI1 (ENSCHYG00000007493) #37 Percora_a ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Siberian musk deer MODERN SPECIES 240 ANTXR1 (ENSMMSG00000010913) #8 GKN1 (ENSMMSG00000010979) #9 GKN2 (ENSMMSG00000011009) #10 ENSMMSG00000011056 ##9 BMP10 (ENSMMSG00000011075) #11 ARHGAP25 (ENSMMSG00000011100) #12 PROKR1 (ENSMMSG00000011183) #14 APLF (ENSMMSG00000011197) #15 FBXO48 (ENSMMSG00000011229) #16 PLEK (ENSMMSG00000011254) #17 CNRIP1 (ENSMMSG00000011305) #18 ENSMMSG00000011356 #19 ENSMMSG00000011434 PNO1 (ENSMMSG00000011455) #20 DNAAF10 (ENSMMSG00000011471) #21 C1D (ENSMMSG00000011514) #22 ENSMMSG00000006279 ENSMMSG00000006311 ETAA1 (ENSMMSG00000006322) #24 MEIS1 (ENSMMSG00000006369) #25 SPRED2 (ENSMMSG00000006652) #28 ACTR2 (ENSMMSG00000006727) #29 ENSMMSG00000006773 RAB1A (ENSMMSG00000006809) #30 CEP68 (ENSMMSG00000006928) #31 SLC1A4 (ENSMMSG00000007010) #32 ENSMMSG00000007124 SERTAD2 (ENSMMSG00000007146) #33 AFTPH (ENSMMSG00000007162) #35 LGALSL (ENSMMSG00000007219) #36 PELI1 (ENSMMSG00000007255) #37 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Bovinae ANCESTRAL SPECIES 4 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Bos ANCESTRAL SPECIES 5 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.ib #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000011179.o.a Bos_a ANCESTRAL SPECIES 6 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.ib #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000011179.o.a Wild yak MODERN SPECIES 577 DNAAF10 (ENSBMUG00000020199) #21 C1D (ENSBMUG00000020190) #22 ETAA1 (ENSBMUG00000020179) #24 MEIS1 (ENSBMUG00000020154) #25 SPRED2 (ENSBMUG00000020108) #28 ENSBMUG00000020074 #29 RAB1A (ENSBMUG00000020049) #30 CEP68 (ENSBMUG00000020034) #31 SLC1A4 (ENSBMUG00000019988) #32 Domestic yak MODERN SPECIES 28 NFU1 (ENSBGRG00000004641) GFPT1 (ENSBGRG00000004514) #7 ANTXR1 (ENSBGRG00000004323) #8 GKN1 (ENSBGRG00000004227) #9 GKN2 (ENSBGRG00000004175) #10 ENSBGRG00000004101 ##9 BMP10 (ENSBGRG00000004060) #11 ARHGAP25 (ENSBGRG00000003917) #12 PROKR1 (ENSBGRG00000003888) #14 APLF (ENSBGRG00000003735) #15 FBXO48 (ENSBGRG00000003679) #16 PLEK (ENSBGRG00000003648) #17 CNRIP1 (ENSBGRG00000003591) #18 PNO1 (ENSBGRG00000003558) #20 DNAAF10 (ENSBGRG00000013337) #21 C1D (ENSBGRG00000013288) #22 ENSBGRG00000013266 ETAA1 (ENSBGRG00000013146) #24 ENSBGRG00000013128 MEIS1 (ENSBGRG00000012913) #25 SPRED2 (ENSBGRG00000012585) #28 ACTR2 (ENSBGRG00000012280) #29 RAB1A (ENSBGRG00000012081) #30 CEP68 (ENSBGRG00000011823) #31 SLC1A4 (ENSBGRG00000011713) #32 SERTAD2 (ENSBGRG00000011678) #33 AFTPH (ENSBGRG00000011500) #35 ENSBGRG00000011374 #36 PELI1 (ENSBGRG00000011236) #37 VPS54 (ENSBGRG00000010687) UGP2 (ENSBGRG00000010367) Bos_b ANCESTRAL SPECIES 16 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556.ib #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000011179.o.a Hybrid Bos Indicus MODERN SPECIES 2 GKN1 (ENSBIXG00005008210) #9 GKN2 (ENSBIXG00005008219) #10 ENSBIXG00005008228 ##9 BMP10 (ENSBIXG00005008241) #11 ENSBIXG00005008244 ARHGAP25 (ENSBIXG00005008280) #12 PROKR1 (ENSBIXG00005008293) #14 ENSBIXG00005008303 APLF (ENSBIXG00005008315) #15 FBXO48 (ENSBIXG00005008327) #16 PLEK (ENSBIXG00005008346) #17 ENSBIXG00005008358 ENSBIXG00005000174 #18 PNO1 (ENSBIXG00005000175) #20 DNAAF10 (ENSBIXG00005008434) #21 C1D (ENSBIXG00005000197) #22 ETAA1 (ENSBIXG00005008485) #24 MEIS1 (ENSBIXG00005000216) #25 SPRED2 (ENSBIXG00005000234) #28 ACTR2 (ENSBIXG00005008678) #29 CEP68 (ENSBIXG00005006085) #31 SLC1A4 (ENSBIXG00005008778) #32 ENSBIXG00005008797 RAB1A (ENSBIXG00005000282) #30 SERTAD2 (ENSBIXG00005008870) #33 AFTPH (ENSBIXG00005008912) #35 ENSBIXG00005008944 #36 PELI1 (ENSBIXG00005008978) #37 VPS54 (ENSBIXG00005009062) UGP2 (ENSBIXG00005009159) MDH1 (ENSBIXG00005009206) Cow MODERN SPECIES 2 GFPT1 (ENSBTAG00000017626) #7 ANTXR1 (ENSBTAG00000007808) #8 GKN1 (ENSBTAG00000012949) #9 GKN2 (ENSBTAG00000017199) #10 ENSBTAG00000038835 ##9 BMP10 (ENSBTAG00000000992) #11 ARHGAP25 (ENSBTAG00000023976) #12 PROKR1 (ENSBTAG00000050333) #14 APLF (ENSBTAG00000018401) #15 FBXO48 (ENSBTAG00000047772) #16 PLEK (ENSBTAG00000009658) #17 CNRIP1 (ENSBTAG00000001408) #18 PPP3R1 (ENSBTAG00000010619) #19 PNO1 (ENSBTAG00000010604) #20 DNAAF10 (ENSBTAG00000010595) #21 C1D (ENSBTAG00000049002) #22 ETAA1 (ENSBTAG00000011727) #24 MEIS1 (ENSBTAG00000008448) #25 SPRED2 (ENSBTAG00000019456) #28 ACTR2 (ENSBTAG00000009761) #29 RAB1A (ENSBTAG00000016720) #30 CEP68 (ENSBTAG00000016717) #31 SLC1A4 (ENSBTAG00000007763) #32 ENSBTAG00000050435 SERTAD2 (ENSBTAG00000049341) #33 AFTPH (ENSBTAG00000009299) #35 LGALSL (ENSBTAG00000055296) #36 ENSBTAG00000053585 PELI1 (ENSBTAG00000020865) #37 VPS54 (ENSBTAG00000000115) UGP2 (ENSBTAG00000000111) American bison MODERN SPECIES 3132 GFPT1 (ENSBBBG00000016730) #7 ANTXR1 (ENSBBBG00000007995) #8 GKN1 (ENSBBBG00000004096) #9 GKN2 (ENSBBBG00000016594) #10 ENSBBBG00000000743 ##9 BMP10 (ENSBBBG00000000758) #11 ARHGAP25 (ENSBBBG00000016580) #12 PROKR1 (ENSBBBG00000008335) #14 APLF (ENSBBBG00000016534) #15 FBXO48 (ENSBBBG00000016515) #16 PLEK (ENSBBBG00000016507) #17 CNRIP1 (ENSBBBG00000016489) #18 PPP3R1 (ENSBBBG00000004071) #19 PNO1 (ENSBBBG00000016461) #20 DNAAF10 (ENSBBBG00000016449) #21 C1D (ENSBBBG00000004066) #22 ENSBBBG00000016408 #24 SIDT1 (ENSBBBG00000004058) USF3 (ENSBBBG00000016318) NAA50 (ENSBBBG00000016293) ATP6V1A (ENSBBBG00000016246) GRAMD1C (ENSBBBG00000016223) ZDHHC23 (ENSBBBG00000007081) CCDC191 (ENSBBBG00000004018) QTRT2 (ENSBBBG00000004001) DRD3 (ENSBBBG00000016079) TIGIT (ENSBBBG00000008552) ZBTB20 (ENSBBBG00000016026) GAP43 (ENSBBBG00000003984) ENSBBBG00000016008 LSAMP (ENSBBBG00000015995) Caprinae ANCESTRAL SPECIES 9 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147214 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00940000154186.a #35 ENSGT00940000155337.h #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.i ENSGT00390000016551 Goat MODERN SPECIES 2 GFPT1 (ENSCHIG00000021854) #7 ANTXR1 (ENSCHIG00000023428) #8 GKN1 (ENSCHIG00000021005) #9 GKN2 (ENSCHIG00000018418) #10 ENSCHIG00000002541 ##9 BMP10 (ENSCHIG00000026064) #11 ARHGAP25 (ENSCHIG00000025694) #12 PROKR1 (ENSCHIG00000015056) #14 APLF (ENSCHIG00000015145) #15 FBXO48 (ENSCHIG00000018110) #16 PLEK (ENSCHIG00000017674) #17 CNRIP1 (ENSCHIG00000017116) #18 PPP3R1 (ENSCHIG00000004688) #19 PNO1 (ENSCHIG00000012839) #20 DNAAF10 (ENSCHIG00000022762) #21 C1D (ENSCHIG00000025729) #22 ETAA1 (ENSCHIG00000027011) #24 MEIS1 (ENSCHIG00000027207) #25 SPRED2 (ENSCHIG00000013086) #28 ENSCHIG00000027162 ACTR2 (ENSCHIG00000014272) #29 RAB1A (ENSCHIG00000014060) #30 CEP68 (ENSCHIG00000025433) #31 SLC1A4 (ENSCHIG00000025336) #32 ENSCHIG00000007620 AFTPH (ENSCHIG00000009404) #35 LGALSL (ENSCHIG00000026638) #36 PELI1 (ENSCHIG00000022027) #37 ENSCHIG00000003100 ##13 VPS54 (ENSCHIG00000010990) UGP2 (ENSCHIG00000021810) Rambouillet Sheep MODERN SPECIES 19 GFPT1 (ENSOARG00020006596) #7 ANTXR1 (ENSOARG00020006876) #8 GKN1 (ENSOARG00020006983) #9 GKN2 (ENSOARG00020007101) #10 ENSOARG00020007185 ##9 BMP10 (ENSOARG00020007232) #11 ARHGAP25 (ENSOARG00020007287) #12 APLF (ENSOARG00020007769) #15 PROKR1 (ENSOARG00020007957) #14 FBXO48 (ENSOARG00020007981) #16 PLEK (ENSOARG00020000213) #17 CNRIP1 (ENSOARG00020000300) #18 PPP3R1 (ENSOARG00020000338) #19 PNO1 (ENSOARG00020000405) #20 DNAAF10 (ENSOARG00020000424) #21 C1D (ENSOARG00020000448) #22 ETAA1 (ENSOARG00020000471) #24 MEIS1 (ENSOARG00020000528) #25 ENSOARG00020000610 SPRED2 (ENSOARG00020000634) #28 ACTR2 (ENSOARG00020000701) #29 ENSOARG00020000747 RAB1A (ENSOARG00020000781) #30 SLC1A4 (ENSOARG00020000870) #32 ENSOARG00020000886 SERTAD2 (ENSOARG00020000894) #33 LGALSL (ENSOARG00020000922) #36 PELI1 (ENSOARG00020000937) #37 ENSOARG00020000952 ##13 VPS54 (ENSOARG00020000984) UGP2 (ENSOARG00020001100) Cetacea ANCESTRAL SPECIES 16 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B.i ENSGT00530000063410.a ENSGT00390000016551 Blue whale MODERN SPECIES 4 GFPT1 (ENSBMSG00010013920) #7 ANTXR1 (ENSBMSG00010014106) #8 GKN1 (ENSBMSG00010014173) #9 GKN2 (ENSBMSG00010014230) #10 ENSBMSG00010014270 ##9 BMP10 (ENSBMSG00010014307) #11 ARHGAP25 (ENSBMSG00010014354) #12 PROKR1 (ENSBMSG00010014509) #14 APLF (ENSBMSG00010014533) #15 FBXO48 (ENSBMSG00010014557) #16 PLEK (ENSBMSG00010014580) #17 CNRIP1 (ENSBMSG00010014640) #18 PPP3R1 (ENSBMSG00010014702) #19 PNO1 (ENSBMSG00010014773) #20 DNAAF10 (ENSBMSG00010014807) #21 C1D (ENSBMSG00010014843) #22 ETAA1 (ENSBMSG00010014898) #24 MEIS1 (ENSBMSG00010014951) #25 SPRED2 (ENSBMSG00010015313) #28 ENSBMSG00010015420 ACTR2 (ENSBMSG00010015452) #29 RAB1A (ENSBMSG00010015536) #30 CEP68 (ENSBMSG00010015630) #31 ENSBMSG00010015739 #32 SERTAD2 (ENSBMSG00010015761) #33 AFTPH (ENSBMSG00010015789) #35 ENSBMSG00010015828 LGALSL (ENSBMSG00010015854) #36 PELI1 (ENSBMSG00010015886) #37 VPS54 (ENSBMSG00010015929) ENSBMSG00010016142 Odontoceti ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.gb.a.a.b ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B.i ENSGT00390000002738.a.e.a Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.gb.a.a.b ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B.i ENSGT00390000002738.a.e.a Dolphin MODERN SPECIES 6733 PPP3R1 (ENSTTRG00000021395) #19 PNO1 (ENSTTRG00000014002) #20 DNAAF10 (ENSTTRG00000013991) #21 C1D (ENSTTRG00000013982) #22 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B.i ENSGT00390000002738.a.e.a Monodontidae ANCESTRAL SPECIES 13 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B.i ENSGT00390000002738.a.e.a Beluga whale MODERN SPECIES 42 ANTXR1 (ENSDLEG00000005620) #8 GKN1 (ENSDLEG00000005657) #9 GKN2 (ENSDLEG00000005673) #10 ENSDLEG00000005689 ##9 BMP10 (ENSDLEG00000005697) #11 ENSDLEG00000005710 #12 ARHGAP25 (ENSDLEG00000005744) #12 PROKR1 (ENSDLEG00000005769) #14 APLF (ENSDLEG00000005776) #15 FBXO48 (ENSDLEG00000005798) #16 PLEK (ENSDLEG00000005814) #17 CNRIP1 (ENSDLEG00000005826) #18 PPP3R1 (ENSDLEG00000005831) #19 PNO1 (ENSDLEG00000005835) #20 WDR92 (ENSDLEG00000005842) #21 C1D (ENSDLEG00000013334) #22 ETAA1 (ENSDLEG00000013344) #24 MEIS1 (ENSDLEG00000013356) #25 SPRED2 (ENSDLEG00000013406) #28 ACTR2 (ENSDLEG00000013424) #29 RAB1A (ENSDLEG00000013451) #30 CEP68 (ENSDLEG00000013462) #31 SLC1A4 (ENSDLEG00000013482) #32 SERTAD2 (ENSDLEG00000013497) #33 AFTPH (ENSDLEG00000013504) #35 LGALSL (ENSDLEG00000013531) #36 PELI1 (ENSDLEG00000013564) #37 VPS54 (ENSDLEG00000013588) ENSDLEG00000013630 UGP2 (ENSDLEG00000013637) ENSDLEG00000013659 Narwhal MODERN SPECIES 305 GFPT1 (ENSMMNG00015014974) #7 ANTXR1 (ENSMMNG00015015005) #8 GKN1 (ENSMMNG00015015029) #9 GKN2 (ENSMMNG00015015048) #10 ENSMMNG00015015070 ##9 BMP10 (ENSMMNG00015015084) #11 ARHGAP25 (ENSMMNG00015015108) #12 PROKR1 (ENSMMNG00015015283) #14 APLF (ENSMMNG00015015298) #15 FBXO48 (ENSMMNG00015015325) #16 PLEK (ENSMMNG00015015351) #17 CNRIP1 (ENSMMNG00015015380) #18 PPP3R1 (ENSMMNG00015015405) #19 PNO1 (ENSMMNG00015015433) #20 DNAAF10 (ENSMMNG00015015443) #21 C1D (ENSMMNG00015015470) #22 ETAA1 (ENSMMNG00015015495) #24 MEIS1 (ENSMMNG00015015523) #25 ENSMMNG00015015655 SPRED2 (ENSMMNG00015015689) #28 ACTR2 (ENSMMNG00015015753) #29 RAB1A (ENSMMNG00015015848) #30 CEP68 (ENSMMNG00015015909) #31 SLC1A4 (ENSMMNG00015015960) #32 SERTAD2 (ENSMMNG00015016005) #33 AFTPH (ENSMMNG00015016029) #35 LGALSL (ENSMMNG00015016100) #36 PELI1 (ENSMMNG00015016144) #37 VPS54 (ENSMMNG00015016195) ENSMMNG00015009005 PHPT1 (ENSMMNG00015009040) Vaquita MODERN SPECIES 4 GFPT1 (ENSPSNG00000019034) #7 ANTXR1 (ENSPSNG00000018795) #8 GKN1 (ENSPSNG00000018548) #9 GKN2 (ENSPSNG00000018430) #10 ENSPSNG00000018367 ##9 BMP10 (ENSPSNG00000018330) #11 ARHGAP25 (ENSPSNG00000018111) #12 PROKR1 (ENSPSNG00000018062) #14 APLF (ENSPSNG00000018014) #15 FBXO48 (ENSPSNG00000017972) #16 PLEK (ENSPSNG00000017885) #17 CNRIP1 (ENSPSNG00000017800) #18 PPP3R1 (ENSPSNG00000017608) #19 PNO1 (ENSPSNG00000017552) #20 DNAAF10 (ENSPSNG00000017470) #21 C1D (ENSPSNG00000017424) #22 ETAA1 (ENSPSNG00000017386) #24 MEIS1 (ENSPSNG00000017177) #25 ENSPSNG00000017076 SPRED2 (ENSPSNG00000016931) #28 ACTR2 (ENSPSNG00000016825) #29 RAB1A (ENSPSNG00000016689) #30 CEP68 (ENSPSNG00000016545) #31 SLC1A4 (ENSPSNG00000016415) #32 SERTAD2 (ENSPSNG00000016327) #33 AFTPH (ENSPSNG00000016250) #35 LGALSL (ENSPSNG00000016184) #36 PELI1 (ENSPSNG00000016122) #37 VPS54 (ENSPSNG00000015574) ENSPSNG00000015479 MDH1 (ENSPSNG00000015270) Sperm whale DUPLICATION Sperm whale MODERN SPECIES 3 ANTXR1 (ENSPCTG00005009423) #8 GKN1 (ENSPCTG00005009330) #9 GKN2 (ENSPCTG00005009224) #10 BMP10 (ENSPCTG00005009185) #11 ARHGAP25 (ENSPCTG00005009007) #12 PROKR1 (ENSPCTG00005008946) #14 ENSPCTG00005008914 APLF (ENSPCTG00005008883) #15 FBXO48 (ENSPCTG00005008864) #16 PLEK (ENSPCTG00005008806) #17 CNRIP1 (ENSPCTG00005008746) #18 PPP3R1 (ENSPCTG00005008639) #19 PNO1 (ENSPCTG00005008568) #20 WDR92 (ENSPCTG00005008494) #21 ENSPCTG00005008480 C1D (ENSPCTG00005008403) #22 ETAA1 (ENSPCTG00005008337) #24 MEIS1 (ENSPCTG00005008167) #25 ENSPCTG00005008130 ENSPCTG00005008120 SPRED2 (ENSPCTG00005008031) #28 ACTR2 (ENSPCTG00005007920) #29 RAB1A (ENSPCTG00005007858) #30 CEP68 (ENSPCTG00005007824) #31 ENSPCTG00005007798 #32 SERTAD2 (ENSPCTG00005007784) #33 AFTPH (ENSPCTG00005007713) #35 LGALSL (ENSPCTG00005007670) #36 ENSPCTG00005007660 PELI1 (ENSPCTG00005007650) #37 VPS54 (ENSPCTG00005007443) Sperm whale MODERN SPECIES 7 TESMIN (ENSPCTG00005015085) GAL (ENSPCTG00005014998) ENSPCTG00005014980 #22 PPP6R3 (ENSPCTG00005014547) LRP5 (ENSPCTG00005012293) C16H11orf24 (ENSPCTG00005012094) KMT5B (ENSPCTG00005012015) CHKA (ENSPCTG00005011739) TCIRG1 (ENSPCTG00005011681) NDUFS8 (ENSPCTG00005011545) ALDH3B1 (ENSPCTG00005011416) UNC93B1 (ENSPCTG00005011356) ENSPCTG00005011272 ENSPCTG00005011240 ENSPCTG00005011185 ENSPCTG00005011165 CLCF1 (ENSPCTG00005011093) POLD4 (ENSPCTG00005011022) Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Chiroptera ANCESTRAL SPECIES 10 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Greater horseshoe bat DUPLICATION Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 4 ANTXR1 (ENSRFEG00010015883) #8 GKN1 (ENSRFEG00010006208) #9 GKN2 (ENSRFEG00010006314) #10 ENSRFEG00010006363 ##9 BMP10 (ENSRFEG00010006382) #11 ENSRFEG00010006412 ARHGAP25 (ENSRFEG00010006451) #12 PROKR1 (ENSRFEG00010006533) #14 APLF (ENSRFEG00010006577) #15 FBXO48 (ENSRFEG00010006636) #16 PLEK (ENSRFEG00010006661) #17 CNRIP1 (ENSRFEG00010006735) #18 PPP3R1 (ENSRFEG00010006792) #19 PNO1 (ENSRFEG00010006896) #20 DNAAF10 (ENSRFEG00010006949) #21 ENSRFEG00010007018 #22 ETAA1 (ENSRFEG00010007107) #24 MEIS1 (ENSRFEG00010007165) #25 ENSRFEG00010007383 SPRED2 (ENSRFEG00010007454) #28 ACTR2 (ENSRFEG00010007536) #29 ENSRFEG00010007617 RAB1A (ENSRFEG00010007659) #30 CEP68 (ENSRFEG00010007746) #31 SLC1A4 (ENSRFEG00010007793) #32 SERTAD2 (ENSRFEG00010007864) #33 AFTPH (ENSRFEG00010007890) #35 LGALSL (ENSRFEG00010007948) #36 PELI1 (ENSRFEG00010008007) #37 VPS54 (ENSRFEG00010008048) UGP2 (ENSRFEG00010008438) Greater horseshoe bat MODERN SPECIES 3 ENSRFEG00010015952 ENSRFEG00010016000 ENSRFEG00010016078 ENSRFEG00010016089 ENSRFEG00010016120 ABCA1 (ENSRFEG00010016169) SLC44A1 (ENSRFEG00010016269) ENSRFEG00010016774 FSD1L (ENSRFEG00010016824) FKTN (ENSRFEG00010016923) TAL2 (ENSRFEG00010017010) TMEM38B (ENSRFEG00010017023) ENSRFEG00010017124 ZNF462 (ENSRFEG00010017189) RAD23B (ENSRFEG00010017264) ENSRFEG00010017423 #22 KLF4 (ENSRFEG00010017439) ACTL7B (ENSRFEG00010017556) ACTL7A (ENSRFEG00010017577) ELP1 (ENSRFEG00010017609) ABITRAM (ENSRFEG00010017721) CTNNAL1 (ENSRFEG00010017765) TMEM245 (ENSRFEG00010017866) FRRS1L (ENSRFEG00010017957) EPB41L4B (ENSRFEG00010018038) PTPN3 (ENSRFEG00010018189) ENSRFEG00010018409 PALM2AKAP2 (ENSRFEG00010018553) C9orf152 (ENSRFEG00010018639) ENSRFEG00010018690 ENSRFEG00010018766 Greater horseshoe bat MODERN SPECIES 1 CNOT2 (ENSRFEG00010003667) ENSRFEG00010003596 MYRFL (ENSRFEG00010003520) RAB3IP (ENSRFEG00010003411) BEST3 (ENSRFEG00010003349) LRRC10 (ENSRFEG00010003298) CCT2 (ENSRFEG00010003244) FRS2 (ENSRFEG00010003207) YEATS4 (ENSRFEG00010003171) ENSRFEG00010003140 CPSF6 (ENSRFEG00010003087) CPM (ENSRFEG00010003042) ENSRFEG00010002867 ENSRFEG00010002741 SLC35E3 (ENSRFEG00010002724) ENSRFEG00010002704 #22 NUP107 (ENSRFEG00010002607) ENSRFEG00010002535 MDM1 (ENSRFEG00010002451) IL22 (ENSRFEG00010002409) IL26 (ENSRFEG00010002390) ENSRFEG00010002377 IFNG (ENSRFEG00010002364) DYRK2 (ENSRFEG00010002341) CAND1 (ENSRFEG00010002314) GRIP1 (ENSRFEG00010002241) HELB (ENSRFEG00010002170) IRAK3 (ENSRFEG00010002100) TMBIM4 (ENSRFEG00010002041) LLPH (ENSRFEG00010002004) HMGA2 (ENSRFEG00010001959) Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 1045 GKN2 (ENSMLUG00000003667) #10 ENSMLUG00000029487 ##9 BMP10 (ENSMLUG00000003664) #11 ARHGAP25 (ENSMLUG00000003661) #12 PROKR1 (ENSMLUG00000003660) #14 APLF (ENSMLUG00000005287) #15 FBXO48 (ENSMLUG00000016516) #16 PLEK (ENSMLUG00000016505) #17 CNRIP1 (ENSMLUG00000029512) #18 ENSMLUG00000010807 #21 ENSMLUG00000023760 PNO1 (ENSMLUG00000010850) #20 ENSMLUG00000029561 ENSMLUG00000010802 ENSMLUG00000024867 ENSMLUG00000010791 #22 ETAA1 (ENSMLUG00000011619) #24 ENSMLUG00000005308 MEIS1 (ENSMLUG00000004906) #25 ENSMLUG00000028961 Microbat MODERN SPECIES 86 ENSMLUG00000024947 #22 Microbat MODERN SPECIES 1784 ENSMLUG00000029990 #22 DPPA2 (ENSMLUG00000007444) DPPA4 (ENSMLUG00000016423) Megabat MODERN SPECIES 3065 CNRIP1 (ENSPVAG00000012697) #18 PPP3R1 (ENSPVAG00000024205) #19 PNO1 (ENSPVAG00000012695) #20 DNAAF10 (ENSPVAG00000012693) #21 C1D (ENSPVAG00000012692) #22 Equus ANCESTRAL SPECIES 7 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Horse MODERN SPECIES 6 GFPT1 (ENSECAG00000019938) #7 ANTXR1 (ENSECAG00000007023) #8 GKN2 (ENSECAG00000024120) #10 GKN1 (ENSECAG00000023106) #9 ENSECAG00000006757 ##9 BMP10 (ENSECAG00000007670) #11 ARHGAP25 (ENSECAG00000009153) #12 PROKR1 (ENSECAG00000031648) #14 ENSECAG00000028191 APLF (ENSECAG00000013246) #15 FBXO48 (ENSECAG00000018966) #16 PLEK (ENSECAG00000018996) #17 PPP3R1 (ENSECAG00000009627) #19 PNO1 (ENSECAG00000011263) #20 ENSECAG00000057082 C1D (ENSECAG00000002187) #22 ETAA1 (ENSECAG00000006358) #24 MEIS1 (ENSECAG00000009387) #25 SPRED2 (ENSECAG00000005881) #28 ACTR2 (ENSECAG00000009219) #29 RAB1A (ENSECAG00000009926) #30 CEP68 (ENSECAG00000009985) #31 SLC1A4 (ENSECAG00000011229) #32 SERTAD2 (ENSECAG00000040555) #33 AFTPH (ENSECAG00000012175) #35 LGALSL (ENSECAG00000018099) #36 PELI1 (ENSECAG00000021804) #37 VPS54 (ENSECAG00000022920) UGP2 (ENSECAG00000016705) WDPCP (ENSECAG00000019956) MDH1 (ENSECAG00000010849) Donkey MODERN SPECIES 26 GFPT1 (ENSEASG00005007343) #7 ANTXR1 (ENSEASG00005007337) #8 GKN1 (ENSEASG00005007330) #9 GKN2 (ENSEASG00005007325) #10 ENSEASG00005007322 ##9 BMP10 (ENSEASG00005036298) #11 ARHGAP25 (ENSEASG00005007316) #12 PROKR1 (ENSEASG00005028856) #14 APLF (ENSEASG00005007314) #15 FBXO48 (ENSEASG00005007313) #16 PLEK (ENSEASG00005007312) #17 CNRIP1 (ENSEASG00005030124) #18 ENSEASG00005007310 #19 PNO1 (ENSEASG00005007309) #20 DNAAF10 (ENSEASG00005007308) #21 C1D (ENSEASG00005033257) #22 ETAA1 (ENSEASG00005007305) #24 MEIS1 (ENSEASG00005007304) #25 SPRED2 (ENSEASG00005027956) #28 ACTR2 (ENSEASG00005007299) #29 RAB1A (ENSEASG00005034669) #30 CEP68 (ENSEASG00005007297) #31 SLC1A4 (ENSEASG00005007296) #32 ENSEASG00005035148 SERTAD2 (ENSEASG00005026993) #33 AFTPH (ENSEASG00005007290) #35 LGALSL (ENSEASG00005007283) #36 PELI1 (ENSEASG00005007279) #37 VPS54 (ENSEASG00005007268) UGP2 (ENSEASG00005007264) MDH1 (ENSEASG00005007262) Carnivora ANCESTRAL SPECIES 19 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Caniformia ANCESTRAL SPECIES 18 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Canidae ANCESTRAL SPECIES 10 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00390000017839.o.a ENSGT00940000156327 #25 ENSGT00950000183164.E.c.b.b ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Canis_lupus ANCESTRAL SPECIES 9 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00950000183010.a.a.a.a.c.b.d.a.a ENSGT00390000009597 #24 ENSGT00390000017839.o.a ENSGT00940000156327 #25 ENSGT00950000183164.E.c.b.b ENSGT00940000156841 #28 ENSGT00910000147398 #27 ENSGT00940000154556 #29 ENSGT00390000017004.a.a.q.a ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 Dingo MODERN SPECIES 307 NFU1 (ENSCAFG00020000713) GFPT1 (ENSCAFG00020000705) #7 ANTXR1 (ENSCAFG00020000433) #8 GKN1 (ENSCAFG00020000316) #9 GKN2 (ENSCAFG00020000261) #10 BMP10 (ENSCAFG00020000180) #11 ARHGAP25 (ENSCAFG00020000168) #12 PROKR1 (ENSCAFG00020000143) #14 APLF (ENSCAFG00020000129) #15 FBXO48 (ENSCAFG00020000114) #16 PLEK (ENSCAFG00020000109) #17 CNRIP1 (ENSCAFG00020000090) #18 PPP3R1 (ENSCAFG00020027004) #19 PNO1 (ENSCAFG00020027002) #20 DNAAF10 (ENSCAFG00020026999) #21 C1D (ENSCAFG00020026997) #22 ENSCAFG00020026995 ETAA1 (ENSCAFG00020026994) #24 ENSCAFG00020026992 MEIS1 (ENSCAFG00020026989) #25 ENSCAFG00020026987 ENSCAFG00020026985 SPRED2 (ENSCAFG00020026983) #28 ENSCAFG00020026981 #27 ACTR2 (ENSCAFG00020026978) #29 ENSCAFG00020026973 RAB1A (ENSCAFG00020026971) #30 CEP68 (ENSCAFG00020026969) #31 SLC1A4 (ENSCAFG00020026962) #32 AFTPH (ENSCAFG00020026953) #35 LGALSL (ENSCAFG00020026947) #36 Dog MODERN SPECIES 1 NFU1 (ENSCAFG00845025447) GFPT1 (ENSCAFG00845024744) #7 ANTXR1 (ENSCAFG00845024244) #8 GKN1 (ENSCAFG00845024000) #9 GKN2 (ENSCAFG00845023893) #10 BMP10 (ENSCAFG00845023837) #11 ARHGAP25 (ENSCAFG00845023650) #12 PROKR1 (ENSCAFG00845023574) #14 APLF (ENSCAFG00845023524) #15 FBXO48 (ENSCAFG00845023484) #16 PLEK (ENSCAFG00845023363) #17 CNRIP1 (ENSCAFG00845023282) #18 PPP3R1 (ENSCAFG00845022977) #19 PNO1 (ENSCAFG00845022894) #20 WDR92 (ENSCAFG00845022818) #21 WDR92 (ENSCAFG00845022766) #22 ENSCAFG00845022735 ETAA1 (ENSCAFG00845022577) #24 ENSCAFG00845022346 MEIS1 (ENSCAFG00845022164) #25 ENSCAFG00845022112 SPRED2 (ENSCAFG00845022023) #28 ACTR2 (ENSCAFG00845021843) #29 ENSCAFG00845021409 ENSCAFG00845021343 RAB1A (ENSCAFG00845021139) #30 CEP68 (ENSCAFG00845021026) #31 SLC1A4 (ENSCAFG00845020925) #32 AFTPH (ENSCAFG00845020600) #35 ENSCAFG00845020543 LGALSL (ENSCAFG00845020462) #36 Red fox MODERN SPECIES 141 NFU1 (ENSVVUG00000027818) GFPT1 (ENSVVUG00000027815) #7 ANTXR1 (ENSVVUG00000027689) #8 GKN1 (ENSVVUG00000027676) #9 GKN2 (ENSVVUG00000027671) #10 BMP10 (ENSVVUG00000027668) #11 ARHGAP25 (ENSVVUG00000027661) #12 PROKR1 (ENSVVUG00000027657) #14 APLF (ENSVVUG00000027649) #15 FBXO48 (ENSVVUG00000027647) #16 PLEK (ENSVVUG00000027643) #17 ENSVVUG00000027638 PPP3R1 (ENSVVUG00000027635) #19 PNO1 (ENSVVUG00000027634) #20 WDR92 (ENSVVUG00000027632) #21 C1D (ENSVVUG00000027629) #22 ETAA1 (ENSVVUG00000027624) #24 ENSVVUG00000027618 MEIS1 (ENSVVUG00000027610) #25 ENSVVUG00000027601 SPRED2 (ENSVVUG00000027600) #28 ACTR2 (ENSVVUG00000027598) #29 ENSVVUG00000027596 ENSVVUG00000027593 ENSVVUG00000027592 RAB1A (ENSVVUG00000027588) #30 CEP68 (ENSVVUG00000027585) #31 SLC1A4 (ENSVVUG00000027576) #32 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mustelinae ANCESTRAL SPECIES 16 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Ferret MODERN SPECIES 169 AAK1 (ENSMPUG00000006715) ENSMPUG00000006663 GFPT1 (ENSMPUG00000006393) #7 ANTXR1 (ENSMPUG00000006376) #8 GKN1 (ENSMPUG00000006333) #9 GKN2 (ENSMPUG00000006320) #10 BMP10 (ENSMPUG00000006313) #11 ARHGAP25 (ENSMPUG00000006303) #12 PROKR1 (ENSMPUG00000006297) #14 APLF (ENSMPUG00000006285) #15 PLEK (ENSMPUG00000006274) #17 CNRIP1 (ENSMPUG00000006263) #18 PPP3R1 (ENSMPUG00000006250) #19 ENSMPUG00000006244 #20 DNAAF10 (ENSMPUG00000006235) #21 C1D (ENSMPUG00000006224) #22 ETAA1 (ENSMPUG00000006214) #24 MEIS1 (ENSMPUG00000006198) #25 SPRED2 (ENSMPUG00000006186) #28 ACTR2 (ENSMPUG00000006176) #29 RAB1A (ENSMPUG00000006139) #30 CEP68 (ENSMPUG00000006108) #31 SLC1A4 (ENSMPUG00000006098) #32 ENSMPUG00000006094 ENSMPUG00000006090 SERTAD2 (ENSMPUG00000018821) #33 AFTPH (ENSMPUG00000006081) #35 LGALSL (ENSMPUG00000006075) #36 ENSMPUG00000006072 PELI1 (ENSMPUG00000006068) #37 VPS54 (ENSMPUG00000006057) American mink MODERN SPECIES 360 GKN1 (ENSNVIG00000018290) #9 GKN2 (ENSNVIG00000018267) #10 BMP10 (ENSNVIG00000018262) #11 RHG25 (ENSNVIG00000018233) #12 PROKR1 (ENSNVIG00000018226) #14 ENSNVIG00000018224 ENSNVIG00000018217 #15 PLEK (ENSNVIG00000018184) #17 CNRP1 (ENSNVIG00000018162) #18 PPP3R1 (ENSNVIG00000018135) #19 ENSNVIG00000018125 #20 DNAAF10 (ENSNVIG00000018094) #21 C1D (ENSNVIG00000018063) #22 ETAA1 (ENSNVIG00000018016) #24 Ursidae ANCESTRAL SPECIES 9 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c.x #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.p Giant Panda MODERN SPECIES 14 NFU1 (ENSAMEG00000016216) GFPT1 (ENSAMEG00000016228) #7 ANTXR1 (ENSAMEG00000014069) #8 GKN1 (ENSAMEG00000014101) #9 GKN2 (ENSAMEG00000014107) #10 BMP10 (ENSAMEG00000014110) #11 ARHGAP25 (ENSAMEG00000000374) #12 PROKR1 (ENSAMEG00000027677) #14 APLF (ENSAMEG00000000409) #15 ENSAMEG00000029506 #16 PLEK (ENSAMEG00000004920) #17 CNRIP1 (ENSAMEG00000004912) #18 PPP3R1 (ENSAMEG00000027372) #19 PNO1 (ENSAMEG00000004897) #20 DNAAF10 (ENSAMEG00000004868) #21 C1D (ENSAMEG00000004859) #22 ETAA1 (ENSAMEG00000015785) #24 MEIS1 (ENSAMEG00000015779) #25 ENSAMEG00000029782 ENSAMEG00000015767 #28 ENSAMEG00000015749 #29 ENSAMEG00000024763 ENSAMEG00000031136 RAB1A (ENSAMEG00000026261) #30 CEP68 (ENSAMEG00000001121) #31 SLC1A4 (ENSAMEG00000001092) #32 SERTAD2 (ENSAMEG00000028964) #33 AFTPH (ENSAMEG00000001080) #35 LGALSL (ENSAMEG00000027975) #36 PELI1 (ENSAMEG00000001167) #37 ENSAMEG00000027202 Ursus ANCESTRAL SPECIES 20 ENSGT00390000011296 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c.x #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.p ENSGT00390000009819.a.a.o American black bear MODERN SPECIES 3020 C1D (ENSUAMG00000025246) #22 Polar bear DUPLICATION Polar bear MODERN SPECIES 223 NFU1 (ENSUMAG00000021254) GFPT1 (ENSUMAG00000021249) #7 ANTXR1 (ENSUMAG00000021191) #8 GKN1 (ENSUMAG00000021176) #9 GKN2 (ENSUMAG00000021173) #10 BMP10 (ENSUMAG00000021172) #11 ARHGAP25 (ENSUMAG00000021168) #12 PROKR1 (ENSUMAG00000021155) #14 APLF (ENSUMAG00000021151) #15 FBXO48 (ENSUMAG00000021148) #16 PLEK (ENSUMAG00000021146) #17 CNRIP1 (ENSUMAG00000021144) #18 PPP3R1 (ENSUMAG00000021129) #19 PNO1 (ENSUMAG00000021126) #20 DNAAF10 (ENSUMAG00000021123) #21 C1D (ENSUMAG00000021118) #22 ETAA1 (ENSUMAG00000021106) #24 MEIS1 (ENSUMAG00000021098) #25 SPRED2 (ENSUMAG00000021053) #28 ACTR2 (ENSUMAG00000021042) #29 ENSUMAG00000021041 RAB1A (ENSUMAG00000021038) #30 CEP68 (ENSUMAG00000021035) #31 SLC1A4 (ENSUMAG00000021032) #32 ENSUMAG00000021019 #34 AFTPH (ENSUMAG00000021014) #35 LGALSL (ENSUMAG00000021007) #36 PELI1 (ENSUMAG00000021002) #37 VPS54 (ENSUMAG00000020982) UGP2 (ENSUMAG00000020975) MDH1 (ENSUMAG00000020965) Polar bear MODERN SPECIES 170 SRSF11 (ENSUMAG00000006618) ANKRD13C (ENSUMAG00000006610) CTH (ENSUMAG00000006601) ENSUMAG00000006594 #23 PTGER3 (ENSUMAG00000006569) ZRANB2 (ENSUMAG00000006559) ENSUMAG00000006557 NEGR1 (ENSUMAG00000006553) ENSUMAG00000006534 FPGT (ENSUMAG00000006532) ENSUMAG00000006528 TNNI3K (ENSUMAG00000006497) ENSUMAG00000006473 CRYZ (ENSUMAG00000006464) TYW3 (ENSUMAG00000006460) ENSUMAG00000006451 #22 LHX8 (ENSUMAG00000006438) SLC44A5 (ENSUMAG00000006391) ENSUMAG00000006369 ENSUMAG00000006364 RABGGTB (ENSUMAG00000006348) ENSUMAG00000006342 MSH4 (ENSUMAG00000006298) ASB17 (ENSUMAG00000006293) ENSUMAG00000006290 ENSUMAG00000006285 ST6GALNAC5 (ENSUMAG00000006283) PIGK (ENSUMAG00000006280) AK5 (ENSUMAG00000006235) ZZZ3 (ENSUMAG00000006219) USP33 (ENSUMAG00000006203) Felidae DUPLICATION Felidae DUPLICATION Felidae ANCESTRAL SPECIES 3 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00390000008279.a.g.b ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.o.a #22 ENSGT00390000016292.i.a.f ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00950000183164.E.c.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 #28 ENSGT00960000190724 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 Cat MODERN SPECIES 2 GFPT1 (ENSFCAG00000007598) #7 ANTXR1 (ENSFCAG00000007597) #8 GKN1 (ENSFCAG00000007596) #9 GKN2 (ENSFCAG00000031999) #10 ENSFCAG00000038235 #11 ARHGAP25 (ENSFCAG00000007595) #12 ENSFCAG00000028283 PROKR1 (ENSFCAG00000040150) #14 APLF (ENSFCAG00000022636) #15 FBXO48 (ENSFCAG00000033588) #16 PLEK (ENSFCAG00000009426) #17 ENSFCAG00000052333 PPP3R1 (ENSFCAG00000033294) #19 PNO1 (ENSFCAG00000041028) #20 DNAAF10 (ENSFCAG00000027122) #21 C1D (ENSFCAG00000028933) #22 ENSFCAG00000028962 ETAA1 (ENSFCAG00000026219) #24 MEIS1 (ENSFCAG00000036549) #25 ENSFCAG00000037094 ENSFCAG00000028286 SPRED2 (ENSFCAG00000004962) #28 ENSFCAG00000051060 ACTR2 (ENSFCAG00000004960) #29 ENSFCAG00000014868 RAB1A (ENSFCAG00000002536) #30 CEP68 (ENSFCAG00000030849) #31 SLC1A4 (ENSFCAG00000001506) #32 SERTAD2 (ENSFCAG00000002492) #33 AFTPH (ENSFCAG00000028719) #35 ENSFCAG00000045546 #36 Panthera ANCESTRAL SPECIES 2 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00390000008279.a.g.b ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.o.a #22 ENSGT00390000016292.i.a.f ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00950000183164.E.c.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337.f #36 ENSGT00950000183050.b.b.a #37 Tiger MODERN SPECIES 184 GFPT1 (ENSPTIG00000012830) #7 ANTXR1 (ENSPTIG00000008417) #8 GKN1 (ENSPTIG00000007559) #9 GKN2 (ENSPTIG00000006248) #10 BMP10 (ENSPTIG00000005877) #11 ARHGAP25 (ENSPTIG00000018750) #12 PROKR1 (ENSPTIG00000018114) #14 APLF (ENSPTIG00000016997) #15 FBXO48 (ENSPTIG00000016831) #16 PLEK (ENSPTIG00000016072) #17 CNRIP1 (ENSPTIG00000015693) #18 ENSPTIG00000015180 PPP3R1 (ENSPTIG00000012344) #19 PNO1 (ENSPTIG00000011738) #20 DNAAF10 (ENSPTIG00000011069) #21 C1D (ENSPTIG00000009414) #22 Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00390000008279.a.g.b ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00940000163647 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.o.a #22 ENSGT00390000016292.i.a.f ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00950000183164.E.c.b.b ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000164277 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337.f #36 lion MODERN SPECIES 3 ENSPLOG00000013289 GKN1 (ENSPLOG00000013345) #9 GKN2 (ENSPLOG00000013504) #10 BMP10 (ENSPLOG00000013596) #11 ARHGAP25 (ENSPLOG00000013647) #12 ENSPLOG00000013777 PROKR1 (ENSPLOG00000013815) #14 APLF (ENSPLOG00000013862) #15 FBXO48 (ENSPLOG00000013995) #16 PLEK (ENSPLOG00000014035) #17 CNRIP1 (ENSPLOG00000014131) #18 PPP3R1 (ENSPLOG00000014231) #19 ENSPLOG00000014345 PNO1 (ENSPLOG00000014368) #20 DNAAF10 (ENSPLOG00000014401) #21 C1D (ENSPLOG00000014545) #22 ENSPLOG00000014602 ETAA1 (ENSPLOG00000014630) #24 MEIS1 (ENSPLOG00000014760) #25 ENSPLOG00000015010 SPRED2 (ENSPLOG00000015039) #28 ACTR2 (ENSPLOG00000015113) #29 ENSPLOG00000015344 RAB1A (ENSPLOG00000015420) #30 CEP68 (ENSPLOG00000015547) #31 SLC1A4 (ENSPLOG00000015581) #32 SERTAD2 (ENSPLOG00000000111) #33 AFTPH (ENSPLOG00000000129) #35 LGALSL (ENSPLOG00000000160) #36 PELI1 (ENSPLOG00000000230) #37 VPS54 (ENSPLOG00000000305) leopard MODERN SPECIES ANTXR1 (ENSPPRG00000013382) #8 GKN1 (ENSPPRG00000013467) #9 GKN2 (ENSPPRG00000013545) #10 BMP10 (ENSPPRG00000013696) #11 ARHGAP25 (ENSPPRG00000014076) #12 ENSPPRG00000014131 PROKR1 (ENSPPRG00000014304) #14 APLF (ENSPPRG00000014711) #15 FBXO48 (ENSPPRG00000014760) #16 PLEK (ENSPPRG00000014845) #17 CNRIP1 (ENSPPRG00000014986) #18 ENSPPRG00000015005 PPP3R1 (ENSPPRG00000015164) #19 PNO1 (ENSPPRG00000015494) #20 DNAAF10 (ENSPPRG00000015515) #21 ENSPPRG00000017045 #22 ENSPPRG00000020640 ETAA1 (ENSPPRG00000017171) #24 MEIS1 (ENSPPRG00000018537) #25 ENSPPRG00000020658 ENSPPRG00000020632 SPRED2 (ENSPPRG00000020675) #28 ACTR2 (ENSPPRG00000020870) #29 ENSPPRG00000021550 RAB1A (ENSPPRG00000025077) #30 CEP68 (ENSPPRG00000025073) #31 SLC1A4 (ENSPPRG00000025070) #32 SERTAD2 (ENSPPRG00000020703) #33 ENSPPRG00000025068 #34 AFTPH (ENSPPRG00000025039) #35 ENSPPRG00000025036 #36 Felidae ANCESTRAL SPECIES ENSGT00390000015405.o.b #22 Panthera ANCESTRAL SPECIES ENSGT00390000015405.o.b #22 Panthera_a ANCESTRAL SPECIES ENSGT00390000015405.o.b #22 leopard MODERN SPECIES 16 SRSF11 (ENSPPRG00000002720) ANKRD13C (ENSPPRG00000003766) CTH (ENSPPRG00000005228) PTGER3 (ENSPPRG00000007485) ZRANB2 (ENSPPRG00000008962) NEGR1 (ENSPPRG00000010074) ENSPPRG00000017420 ENSPPRG00000013198 FPGT (ENSPPRG00000013879) LRRC53 (ENSPPRG00000014287) TNNI3K (ENSPPRG00000015003) ENSPPRG00000015493 ENSPPRG00000022348 ENSPPRG00000023826 TYW3 (ENSPPRG00000023209) ENSPPRG00000022830 #22 ENSPPRG00000000404 ENSPPRG00000005297 ENSPPRG00000006366 LHX8 (ENSPPRG00000006595) ENSPPRG00000006620 SLC44A5 (ENSPPRG00000009619) ACADM (ENSPPRG00000011005) RABGGTB (ENSPPRG00000011439) MSH4 (ENSPPRG00000013083) ASB17 (ENSPPRG00000013874) ENSPPRG00000017991 ST6GALNAC3 (ENSPPRG00000016344) ENSPPRG00000018165 ENSPPRG00000020270 ST6GALNAC5 (ENSPPRG00000021198) Felidae ANCESTRAL SPECIES ENSGT00390000015405.p #22 Panthera ANCESTRAL SPECIES ENSGT00390000015405.p #22 Panthera_a ANCESTRAL SPECIES ENSGT00390000015405.p #22 lion MODERN SPECIES 5 NFYA (ENSPLOG00000002635) OARD1 (ENSPLOG00000002588) APOBEC2 (ENSPLOG00000002560) TSPO2 (ENSPLOG00000002549) UNC5CL (ENSPLOG00000002541) ENSPLOG00000002525 LRFN2 (ENSPLOG00000002507) MOCS1 (ENSPLOG00000002464) DAAM2 (ENSPLOG00000002305) KIF6 (ENSPLOG00000002142) KCNK16 (ENSPLOG00000002089) KCNK17 (ENSPLOG00000002070) KCNK5 (ENSPLOG00000002047) SAYSD1 (ENSPLOG00000002022) GLP1R (ENSPLOG00000001989) ENSPLOG00000001969 #22 DNAH8 (ENSPLOG00000001440) GLO1 (ENSPLOG00000001158) BTBD9 (ENSPLOG00000001128) ENSPLOG00000001093 ZFAND3 (ENSPLOG00000001063) MDGA1 (ENSPLOG00000001024) CCDC167 (ENSPLOG00000001004) CMTR1 (ENSPLOG00000000961) RNF8 (ENSPLOG00000000841) TBC1D22B (ENSPLOG00000000815) TMEM217 (ENSPLOG00000000797) TMEM217B (ENSPLOG00000000786) PIM1 (ENSPLOG00000000767) FGD2 (ENSPLOG00000000704) MTCH1 (ENSPLOG00000000638) Atlantogenata ANCESTRAL SPECIES 43 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Xenarthra ANCESTRAL SPECIES 171 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 Armadillo DUPLICATION Armadillo MODERN SPECIES 2966 THAP6 (ENSDNOG00000039501) CDKL2 (ENSDNOG00000041749) ENSDNOG00000047453 ENSDNOG00000034968 ENSDNOG00000045619 ENSDNOG00000046068 #22 ENSDNOG00000010053 PPEF2 (ENSDNOG00000023606) NAAA (ENSDNOG00000012944) ENSDNOG00000039376 SDAD1 (ENSDNOG00000006304) ENSDNOG00000043830 CXCL9 (ENSDNOG00000044316) CXCL10 (ENSDNOG00000035824) CXCL11 (ENSDNOG00000048035) ART3 (ENSDNOG00000049435) NUP54 (ENSDNOG00000002132) SCARB2 (ENSDNOG00000015857) FAM47E (ENSDNOG00000032529) STBD1 (ENSDNOG00000017677) CCDC158 (ENSDNOG00000025208) Armadillo MODERN SPECIES 575 GFPT1 (ENSDNOG00000006788) #7 ANTXR1 (ENSDNOG00000031105) #8 ENSDNOG00000041148 #9 GKN2 (ENSDNOG00000001948) #10 ENSDNOG00000040031 ##9 BMP10 (ENSDNOG00000034853) #11 ARHGAP25 (ENSDNOG00000049368) #12 PROKR1 (ENSDNOG00000007613) #14 APLF (ENSDNOG00000030969) #15 FBXO48 (ENSDNOG00000036869) #16 PLEK (ENSDNOG00000038949) #17 CNRIP1 (ENSDNOG00000000214) #18 PPP3R1 (ENSDNOG00000040628) #19 PNO1 (ENSDNOG00000019079) #20 DNAAF10 (ENSDNOG00000019076) #21 ENSDNOG00000040804 #22 ETAA1 (ENSDNOG00000034533) #24 ENSDNOG00000038138 MEIS1 (ENSDNOG00000009090) #25 Sloth MODERN SPECIES 13699 C1D (ENSCHOG00000006719) #22 Afrotheria ANCESTRAL SPECIES 46 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Afrotheria_a ANCESTRAL SPECIES 45 ENSGT00940000158488 #7 ENSGT00940000156522 #8 ENSGT00930000150969.A.c.b.a #9 ENSGT00930000150969.A.c.a #10 ENSGT00930000150969.A.c.b.b ##9 ENSGT00940000156279 #11 ENSGT00950000183015.A #12 ENSGT00940000154544.a #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Elephant MODERN SPECIES 278 GFPT1 (ENSLAFG00000011652) #7 ANTXR1 (ENSLAFG00000021821) #8 GKN1 (ENSLAFG00000002205) #9 GKN2 (ENSLAFG00000012988) #10 ENSLAFG00000032679 ##9 BMP10 (ENSLAFG00000001659) #11 ARHGAP25 (ENSLAFG00000016192) #12 PROKR1 (ENSLAFG00000012008) #14 APLF (ENSLAFG00000011551) #15 FBXO48 (ENSLAFG00000026127) #16 PLEK (ENSLAFG00000005718) #17 CNRIP1 (ENSLAFG00000006280) #18 PPP3R1 (ENSLAFG00000022682) #19 PNO1 (ENSLAFG00000000046) #20 DNAAF10 (ENSLAFG00000000042) #21 C1D (ENSLAFG00000002083) #22 ETAA1 (ENSLAFG00000009209) #24 MEIS1 (ENSLAFG00000003445) #25 SPRED2 (ENSLAFG00000000394) #28 ACTR2 (ENSLAFG00000010273) #29 RAB1A (ENSLAFG00000016666) #30 CEP68 (ENSLAFG00000029833) #31 SLC1A4 (ENSLAFG00000017358) #32 SERTAD2 (ENSLAFG00000032288) #33 AFTPH (ENSLAFG00000007172) #35 LGALSL (ENSLAFG00000018660) #36 PELI1 (ENSLAFG00000010471) #37 VPS54 (ENSLAFG00000021799) UGP2 (ENSLAFG00000000399) MDH1 (ENSLAFG00000016504) ENSLAFG00000025584 Hyrax MODERN SPECIES 8593 C1D (ENSPCAG00000010088) #22 Tenrec MODERN SPECIES 9227 C1D (ENSETEG00000014857) #22 Marsupialia ANCESTRAL SPECIES 19 ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00940000154206.b ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Opossum MODERN SPECIES MCM8 (ENSMODG00000003865) TRMT6 (ENSMODG00000003784) ENSMODG00000003761 ENSMODG00000003742 GPCPD1 (ENSMODG00000003735) ENSMODG00000003695 #14 ENSMODG00000003679 #15 ENSMODG00000043880 FBXO48 (ENSMODG00000023128) #16 PLEK (ENSMODG00000003654) #17 CNRIP1 (ENSMODG00000042412) #18 PPP3R1 (ENSMODG00000003614) #19 ENSMODG00000003621 PNO1 (ENSMODG00000003567) #20 DNAAF10 (ENSMODG00000003598) #21 C1D (ENSMODG00000003561) #22 ENSMODG00000003554 #24 MEIS1 (ENSMODG00000003396) #25 SPRED2 (ENSMODG00000003380) #28 ACTR2 (ENSMODG00000003364) #29 ENSMODG00000047741 RAB1A (ENSMODG00000003340) #30 ENSMODG00000003315 #31 SLC1A4 (ENSMODG00000003310) #32 SERTAD2 (ENSMODG00000023126) #33 AFTPH (ENSMODG00000003235) #35 ENSMODG00000047159 #34 ENSMODG00000003226 #36 PELI1 (ENSMODG00000003212) #37 VPS54 (ENSMODG00000003191) ENSMODG00000003102 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00390000008255 ENSGT00940000155968 ENSGT00940000156575 ENSGT00940000156185 ENSGT01030000234517.D ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Diprotodontia ANCESTRAL SPECIES 2 ENSGT00390000008255 ENSGT00940000155968 ENSGT00940000156575 ENSGT00940000156185 ENSGT01030000234517.D ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00390000008255 ENSGT00940000155968 ENSGT00940000156575 ENSGT00940000156185 ENSGT01030000234517.D ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a koala DUPLICATION koala MODERN SPECIES 20 NFU1 (ENSPCIG00000026062) ENSPCIG00000019047 ENSPCIG00000019051 ENSPCIG00000018587 ROCK2 (ENSPCIG00000018605) SLC66A3 (ENSPCIG00000018608) C2orf50 (ENSPCIG00000018610) ENSPCIG00000018616 #14 ENSPCIG00000018618 #15 FBXO48 (ENSPCIG00000018620) #16 PLEK (ENSPCIG00000018623) #17 CNRIP1 (ENSPCIG00000037069) #18 PPP3R1 (ENSPCIG00000018625) #19 PNO1 (ENSPCIG00000018626) #20 DNAAF10 (ENSPCIG00000018627) #21 ENSPCIG00000018629 #22 ENSPCIG00000016961 #24 MEIS1 (ENSPCIG00000006632) #25 SPRED2 (ENSPCIG00000035990) #28 ACTR2 (ENSPCIG00000023217) #29 RAB1A (ENSPCIG00000023212) #30 ENSPCIG00000023208 #31 SLC1A4 (ENSPCIG00000023205) #32 SERTAD2 (ENSPCIG00000025805) #33 AFTPH (ENSPCIG00000025802) #35 ENSPCIG00000025803 #34 LGALSL (ENSPCIG00000020092) #36 PELI1 (ENSPCIG00000022340) #37 VPS54 (ENSPCIG00000022325) UGP2 (ENSPCIG00000022314) MDH1 (ENSPCIG00000024579) koala MODERN SPECIES 22 ENSPCIG00000033306 ENSPCIG00000002505 ENSPCIG00000002523 ENSPCIG00000034284 PIK3C3 (ENSPCIG00000013229) RIT2 (ENSPCIG00000003034) SYT4 (ENSPCIG00000003048) SETBP1 (ENSPCIG00000011757) ENSPCIG00000011742 ENSPCIG00000019335 SLC14A2 (ENSPCIG00000019330) SLC14A1 (ENSPCIG00000019326) ENSPCIG00000019325 EPG5 (ENSPCIG00000019029) PSTPIP2 (ENSPCIG00000026564) ENSPCIG00000006831 #22 ENSPCIG00000006824 HAUS1 (ENSPCIG00000006819) C18orf25 (ENSPCIG00000006809) RNF165 (ENSPCIG00000006802) ENSPCIG00000006735 ENSPCIG00000006722 PIAS2 (ENSPCIG00000006717) KATNAL2 (ENSPCIG00000006712) HDHD2 (ENSPCIG00000006706) IER3IP1 (ENSPCIG00000033187) SKOR2 (ENSPCIG00000006700) SMAD2 (ENSPCIG00000015690) ZBTB7C (ENSPCIG00000015685) CTIF (ENSPCIG00000026247) SMAD7 (ENSPCIG00000019168) Common wonbat MODERN SPECIES 1017 AAK1 (ENSVURG00010012128) ANXA4 (ENSVURG00010012194) ENSVURG00010012217 ROCK2 (ENSVURG00010012530) SLC66A3 (ENSVURG00010012545) ENSVURG00010012551 C2orf50 (ENSVURG00010012553) ENSVURG00010012564 #14 ENSVURG00010012569 #15 FBXO48 (ENSVURG00010012574) #16 PLEK (ENSVURG00010012588) #17 CNRIP1 (ENSVURG00010012599) #18 PPP3R1 (ENSVURG00010012603) #19 PNO1 (ENSVURG00010012614) #20 DNAAF10 (ENSVURG00010012624) #21 C1D (ENSVURG00010012637) #22 ENSVURG00010012656 #24 ENSVURG00010012665 MEIS1 (ENSVURG00010012689) #25 SPRED2 (ENSVURG00010012998) #28 ACTR2 (ENSVURG00010013014) #29 RAB1A (ENSVURG00010013043) #30 ENSVURG00010013094 #31 SLC1A4 (ENSVURG00010013104) #32 SERTAD2 (ENSVURG00010013124) #33 AFTPH (ENSVURG00010013132) #35 ENSVURG00010013145 #34 LGALSL (ENSVURG00010013162) #36 PELI1 (ENSVURG00010013173) #37 VPS54 (ENSVURG00010013192) UGP2 (ENSVURG00010013228) Tasmanian devil MODERN SPECIES 1 AAK1 (ENSSHAG00000015125) ANXA4 (ENSSHAG00000014539) ENSSHAG00000014427 ENSSHAG00000023828 ENSSHAG00000012229 ENSSHAG00000027990 ENSSHAG00000026511 ENSSHAG00000029265 #14 ENSSHAG00000002327 #15 PLEK (ENSSHAG00000001830) #17 FBXO48 (ENSSHAG00000004078) #16 CNRIP1 (ENSSHAG00000030089) #18 PPP3R1 (ENSSHAG00000006122) #19 PNO1 (ENSSHAG00000007326) #20 DNAAF10 (ENSSHAG00000007449) #21 C1D (ENSSHAG00000020536) #22 ENSSHAG00000012254 ENSSHAG00000013030 #24 MEIS1 (ENSSHAG00000016546) #25 SPRED2 (ENSSHAG00000030799) #28 ACTR2 (ENSSHAG00000000220) #29 RAB1A (ENSSHAG00000027574) #30 ENSSHAG00000004687 #31 SLC1A4 (ENSSHAG00000029893) #32 SERTAD2 (ENSSHAG00000022880) #33 ENSSHAG00000028826 #34 AFTPH (ENSSHAG00000010633) #35 LGALSL (ENSSHAG00000026611) #36 PELI1 (ENSSHAG00000024330) #37 VPS54 (ENSSHAG00000000961) UGP2 (ENSSHAG00000003089) Sauria ANCESTRAL SPECIES 1 ENSGT00940000162977 ENSGT00940000170045 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Lepidosauria ANCESTRAL SPECIES 69 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Episquamata ANCESTRAL SPECIES ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 Laterata ANCESTRAL SPECIES 13 ENSGT00940000159704 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Argentine black and white tegu MODERN SPECIES 54 PCSK2 (ENSSMRG00000005118) ENSSMRG00000005140 BFSP1 (ENSSMRG00000005154) ENSSMRG00000005206 #14 APLF (ENSSMRG00000005216) #15 FBXO48 (ENSSMRG00000005221) #16 PLEK (ENSSMRG00000005222) #17 CNRIP1 (ENSSMRG00000005226) #18 PPP3R1 (ENSSMRG00000005229) #19 PNO1 (ENSSMRG00000005236) #20 DNAAF10 (ENSSMRG00000005245) #21 C1D (ENSSMRG00000005249) #22 MEIS1 (ENSSMRG00000005267) #25 ENSSMRG00000005283 ENSSMRG00000005289 SPRED2 (ENSSMRG00000005297) #28 ENSSMRG00000005300 ENSSMRG00000005304 ACTR2 (ENSSMRG00000005307) #29 ENSSMRG00000005312 RAB1A (ENSSMRG00000005319) #30 ENSSMRG00000005322 #31 SLC1A4 (ENSSMRG00000005324) #32 SERTAD2 (ENSSMRG00000005372) #33 AFTPH (ENSSMRG00000005377) #35 ENSSMRG00000005383 #34 LGALSL (ENSSMRG00000005386) #36 Common wall lizard MODERN SPECIES 11 ENSPMRG00000003121 ENSPMRG00000003114 ENSPMRG00000003092 ENSPMRG00000003079 WDFY2 (ENSPMRG00000003050) SERPINE3 (ENSPMRG00000003015) FAM124A (ENSPMRG00000002997) ENSPMRG00000002991 APLF (ENSPMRG00000002973) #15 FBXO48 (ENSPMRG00000002967) #16 PLEK (ENSPMRG00000002960) #17 CNRIP1 (ENSPMRG00000002954) #18 PPP3R1 (ENSPMRG00000002950) #19 ENSPMRG00000002943 #20 DNAAF10 (ENSPMRG00000002932) #21 C1D (ENSPMRG00000002925) #22 ENSPMRG00000002914 ENSPMRG00000002903 MEIS1 (ENSPMRG00000002862) #25 ENSPMRG00000002838 SPRED2 (ENSPMRG00000002817) #28 ACTR2 (ENSPMRG00000002797) #29 ENSPMRG00000002778 RAB1A (ENSPMRG00000002764) #30 CEP68 (ENSPMRG00000002741) #31 SLC1A4 (ENSPMRG00000002725) #32 ENSPMRG00000002716 ENSPMRG00000002707 ENSPMRG00000002706 SERTAD2 (ENSPMRG00000002700) #33 ENSPMRG00000002692 Toxicofera ANCESTRAL SPECIES ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT01100000263484.C.a.l ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Elapidae ANCESTRAL SPECIES ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT01100000263484.C.a.l ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Indian cobra MODERN SPECIES SEL1L2 (ENSNNAG00000012056) ENSNNAG00000012226 FLRT3 (ENSNNAG00000012260) SNRPB2 (ENSNNAG00000012519) PCSK2 (ENSNNAG00000012540) BFSP1 (ENSNNAG00000012581) ENSNNAG00000012694 #14 ENSNNAG00000012745 #15 FBXO48 (ENSNNAG00000012774) #16 PLEK (ENSNNAG00000012798) #17 CNRIP1 (ENSNNAG00000012863) #18 ENSNNAG00000012878 PPP3R1 (ENSNNAG00000012886) #19 PNO1 (ENSNNAG00000012918) #20 DNAAF10 (ENSNNAG00000012936) #21 C1D (ENSNNAG00000012988) #22 MEIS1 (ENSNNAG00000013019) #25 SPRED2 (ENSNNAG00000013140) #28 ACTR2 (ENSNNAG00000013219) #29 RAB1A (ENSNNAG00000013227) #30 ENSNNAG00000013240 #31 SLC1A4 (ENSNNAG00000013270) #32 SERTAD2 (ENSNNAG00000013335) #33 ENSNNAG00000013342 #35 ENSNNAG00000013378 #34 MLNR (ENSNNAG00000013400) LGALSL (ENSNNAG00000013404) #36 ENSNNAG00000013415 PELI1 (ENSNNAG00000013434) #37 VPS54 (ENSNNAG00000013453) UGP2 (ENSNNAG00000013510) Elapidae_a ANCESTRAL SPECIES 6 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT01100000263484.C.a.l ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A.h #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT01100000263484.C.a.l ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mainland tiger snake MODERN SPECIES 23 NDUFAF5 (ENSNSUG00000019192) ENSNSUG00000019191 FLRT3 (ENSNSUG00000019190) KIF16B (ENSNSUG00000019188) SNRPB2 (ENSNSUG00000019187) PCSK2 (ENSNSUG00000019186) BFSP1 (ENSNSUG00000019185) ENSNSUG00000019184 #14 ENSNSUG00000019182 FBXO48 (ENSNSUG00000019181) #16 PLEK (ENSNSUG00000019180) #17 CNRIP1 (ENSNSUG00000019179) #18 PPP3R1 (ENSNSUG00000019177) #19 PNO1 (ENSNSUG00000019176) #20 DNAAF10 (ENSNSUG00000019175) #21 C1D (ENSNSUG00000019174) #22 MEIS1 (ENSNSUG00000019167) #25 SPRED2 (ENSNSUG00000019166) #28 ACTR2 (ENSNSUG00000019165) #29 RAB1A (ENSNSUG00000019164) #30 ENSNSUG00000019162 #31 SLC1A4 (ENSNSUG00000019138) #32 ENSNSUG00000019136 SERTAD2 (ENSNSUG00000019135) #33 ENSNSUG00000019134 #34 AFTPH (ENSNSUG00000019132) #35 MLNR (ENSNSUG00000019125) LGALSL (ENSNSUG00000019124) #36 PELI1 (ENSNSUG00000019123) #37 VPS54 (ENSNSUG00000019122) UGP2 (ENSNSUG00000019121) Eastern brown snake MODERN SPECIES 56 SEL1L2 (ENSPTXG00000005877) ENSPTXG00000005876 FLRT3 (ENSPTXG00000005875) KIF16B (ENSPTXG00000005874) SNRPB2 (ENSPTXG00000005873) PCSK2 (ENSPTXG00000005804) BFSP1 (ENSPTXG00000005802) ENSPTXG00000005800 #14 ENSPTXG00000005799 #15 FBXO48 (ENSPTXG00000005797) #16 PLEK (ENSPTXG00000005794) #17 CNRIP1 (ENSPTXG00000005792) #18 PPP3R1 (ENSPTXG00000005790) #19 PNO1 (ENSPTXG00000005788) #20 DNAAF10 (ENSPTXG00000005787) #21 C1D (ENSPTXG00000005785) #22 MEIS1 (ENSPTXG00000005783) #25 SPRED2 (ENSPTXG00000005781) #28 ACTR2 (ENSPTXG00000005779) #29 RAB1A (ENSPTXG00000005777) #30 ENSPTXG00000005775 #31 SLC1A4 (ENSPTXG00000005773) #32 SERTAD2 (ENSPTXG00000005772) #33 ENSPTXG00000005770 #34 AFTPH (ENSPTXG00000006529) #35 MLNR (ENSPTXG00000006528) LGALSL (ENSPTXG00000006527) #36 PELI1 (ENSPTXG00000006526) #37 VPS54 (ENSPTXG00000006525) UGP2 (ENSPTXG00000006524) MDH1 (ENSPTXG00000006523) Blue-lipped sea krait MODERN SPECIES 6669 PPP3R1 (ENSLLTG00000007034) #19 PNO1 (ENSLLTG00000007064) #20 DNAAF10 (ENSLLTG00000007087) #21 C1D (ENSLLTG00000007121) #22 Lizard MODERN SPECIES ENSACAG00000040491 ENSACAG00000044399 KIF16B (ENSACAG00000000407) SNRPB2 (ENSACAG00000000582) OTOR (ENSACAG00000000633) PCSK2 (ENSACAG00000000663) BFSP1 (ENSACAG00000027235) ENSACAG00000000824 #14 APLF (ENSACAG00000000856) #15 FBXO48 (ENSACAG00000000867) #16 PLEK (ENSACAG00000000871) #17 CNRIP1 (ENSACAG00000000999) #18 ENSACAG00000040514 #19 PNO1 (ENSACAG00000001218) #20 DNAAF10 (ENSACAG00000001044) #21 C1D (ENSACAG00000001337) #22 ENSACAG00000038561 MEIS1 (ENSACAG00000002083) #25 SPRED2 (ENSACAG00000002009) #28 ACTR2 (ENSACAG00000001918) #29 ENSACAG00000001866 RAB1A (ENSACAG00000042522) #30 ENSACAG00000001863 #31 SLC1A4 (ENSACAG00000001717) #32 SERTAD2 (ENSACAG00000001714) #33 AFTPH (ENSACAG00000001654) #35 ENSACAG00000001649 LGALSL (ENSACAG00000001605) #36 COL6A3 (ENSACAG00000004231) ENSACAG00000040968 MLPH (ENSACAG00000004551) tuatara MODERN SPECIES 1468 ENSSPUG00000006778 KIF16B (ENSSPUG00000006740) SNRPB2 (ENSSPUG00000006720) OTOR (ENSSPUG00000006709) ENSSPUG00000006695 PCSK2 (ENSSPUG00000006679) BFSP1 (ENSSPUG00000006654) ENSSPUG00000006645 #14 APLF (ENSSPUG00000006632) #15 FBXO48 (ENSSPUG00000006622) #16 PLEK (ENSSPUG00000006613) #17 CNRIP1 (ENSSPUG00000006600) #18 PPP3R1 (ENSSPUG00000006573) #19 PNO1 (ENSSPUG00000006562) #20 DNAAF10 (ENSSPUG00000006542) #21 C1D (ENSSPUG00000006525) #22 ENSSPUG00000006516 #24 MEIS1 (ENSSPUG00000006452) #25 Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000162977 ENSGT00940000170045 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Archosauria ANCESTRAL SPECIES 29 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Aves ANCESTRAL SPECIES 35 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Neognathae ANCESTRAL SPECIES 32 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT01040000241398.a ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Galloanserae ANCESTRAL SPECIES 29 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT01040000241398.a ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Anatidae ANCESTRAL SPECIES 60 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Pink-footed goose MODERN SPECIES 155 APLF (ENSABRG00000002483) #15 FBXO48 (ENSABRG00000002508) #16 PLEK (ENSABRG00000002514) #17 CNRIP1 (ENSABRG00000002531) #18 PPP3R1 (ENSABRG00000002543) #19 PNO1 (ENSABRG00000002566) #20 DNAAF10 (ENSABRG00000002587) #21 C1D (ENSABRG00000002604) #22 ENSABRG00000002625 #24 ENSABRG00000002632 ENSABRG00000002656 MEIS1 (ENSABRG00000002723) #25 SPRED2 (ENSABRG00000002801) #28 ACTR2 (ENSABRG00000002811) #29 RAB1A (ENSABRG00000002833) #30 CEP68 (ENSABRG00000002866) #31 SLC1A4 (ENSABRG00000002879) #32 SERTAD2 (ENSABRG00000002908) #33 AFTPH (ENSABRG00000002918) #35 LGALSL (ENSABRG00000002936) #36 PELI1 (ENSABRG00000002957) #37 Duck MODERN SPECIES 21 PAX1 (ENSAPLG00000021065) XRN2 (ENSAPLG00000013869) KIZ (ENSAPLG00000013782) RALGAPA2 (ENSAPLG00000013547) ENSAPLG00000029177 CFAP61 (ENSAPLG00000013456) CRNKL1 (ENSAPLG00000013105) ENSAPLG00000024100 RIN2 (ENSAPLG00000014865) APLF (ENSAPLG00000009117) #15 PLEK (ENSAPLG00000009140) #17 CNRIP1 (ENSAPLG00000022779) #18 PPP3R1 (ENSAPLG00000023228) #19 PNO1 (ENSAPLG00000029102) #20 DNAAF10 (ENSAPLG00000029023) #21 C1D (ENSAPLG00000009320) #22 ENSAPLG00000025999 #24 MEIS1 (ENSAPLG00000009141) #25 SPRED2 (ENSAPLG00000009387) #28 ACTR2 (ENSAPLG00000009440) #29 RAB1A (ENSAPLG00000018342) #30 CEP68 (ENSAPLG00000016942) #31 SLC1A4 (ENSAPLG00000009621) #32 SERTAD2 (ENSAPLG00000000672) #33 AFTPH (ENSAPLG00000009640) #35 ENSAPLG00000017313 #34 LGALSL (ENSAPLG00000022507) #36 PELI1 (ENSAPLG00000009701) #37 VPS54 (ENSAPLG00000009734) UGP2 (ENSAPLG00000009870) MDH1 (ENSAPLG00000009983) Phasianidae ANCESTRAL SPECIES 29 ENSGT00940000157404 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT01040000241398.a ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00390000001858 #34 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Phasianidae_b ANCESTRAL SPECIES 28 ENSGT00940000157404 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT01040000241398.a ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Chicken MODERN SPECIES 22 NDUFAF5 (ENSGALG00010018061) ITPKB (ENSGALG00010018058) PSEN2 (ENSGALG00010018045) COQ8A (ENSGALG00010018033) CDC42BPA (ENSGALG00010018004) PCSK2 (ENSGALG00010017927) BFSP1 (ENSGALG00010017915) PROKR1 (ENSGALG00010017887) #14 APLF (ENSGALG00010017867) #15 FBXO48 (ENSGALG00010017849) #16 PLEK (ENSGALG00010017831) #17 CNRIP1 (ENSGALG00010017787) #18 PPP3R1 (ENSGALG00010017778) #19 PNO1 (ENSGALG00010017771) #20 DNAAF10 (ENSGALG00010017766) #21 C1D (ENSGALG00010017755) #22 ETAA1 (ENSGALG00010017744) #24 ENSGALG00010017728 ENSGALG00010017722 MEIS1 (ENSGALG00010017708) #25 SPRED2 (ENSGALG00010017672) #28 ACTR2 (ENSGALG00010016276) #29 ENSGALG00010017627 RAB1B (ENSGALG00010017622) #30 CEP68 (ENSGALG00010017594) #31 SLC1A4 (ENSGALG00010019257) #32 SERTAD2 (ENSGALG00010019243) #33 ENSGALG00010017151 #34 AFTPH (ENSGALG00010017141) #35 LGALSL (ENSGALG00010017115) #36 PELI3 (ENSGALG00010018958) #37 Japanese quail MODERN SPECIES 21 PCSK2 (ENSCJPG00005011465) BFSP1 (ENSCJPG00005011467) ENSCJPG00005011482 #14 ENSCJPG00005011483 ENSCJPG00005011484 #15 PLEK (ENSCJPG00005011490) #17 CNRIP1 (ENSCJPG00005011494) #18 PPP3R1 (ENSCJPG00005011495) #19 PNO1 (ENSCJPG00005011496) #20 DNAAF10 (ENSCJPG00005011497) #21 C1D (ENSCJPG00005011500) #22 ENSCJPG00005011513 #24 MEIS1 (ENSCJPG00005011532) #25 SPRED2 (ENSCJPG00005011544) #28 ACTR2 (ENSCJPG00005011545) #29 RAB1A (ENSCJPG00005011546) #30 CEP68 (ENSCJPG00005011547) #31 SLC1A4 (ENSCJPG00005011555) #32 SERTAD2 (ENSCJPG00005011560) #33 AFTPH (ENSCJPG00005011562) #35 ENSCJPG00005011566 #34 ENSCJPG00005011568 #36 ENSCJPG00005011569 #36 PELI1 (ENSCJPG00005011590) #37 VPS54 (ENSCJPG00005011596) UGP2 (ENSCJPG00005011774) Neognathae_b ANCESTRAL SPECIES 32 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Passeriformes ANCESTRAL SPECIES 31 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Great tit MODERN SPECIES 22 ENSPMJG00000001339 ENSPMJG00000001425 SNRPB2 (ENSPMJG00000001585) OTOR (ENSPMJG00000001589) PCSK2 (ENSPMJG00000001625) BFSP1 (ENSPMJG00000001637) ENSPMJG00000001644 APLF (ENSPMJG00000001658) #15 ENSPMJG00000001662 #14 FBXO48 (ENSPMJG00000001663) #16 PLEK (ENSPMJG00000001665) #17 CNRIP1 (ENSPMJG00000001670) #18 PPP3R1 (ENSPMJG00000001689) #19 PNO1 (ENSPMJG00000001695) #20 DNAAF10 (ENSPMJG00000001703) #21 C1D (ENSPMJG00000001708) #22 ENSPMJG00000001774 #24 MEIS1 (ENSPMJG00000001854) #25 SPRED2 (ENSPMJG00000002067) #28 ACTR2 (ENSPMJG00000002085) #29 RAB1A (ENSPMJG00000002113) #30 CEP68 (ENSPMJG00000002124) #31 SLC1A4 (ENSPMJG00000002145) #32 SERTAD2 (ENSPMJG00000002211) #33 AFTPH (ENSPMJG00000002220) #35 ENSPMJG00000002259 #34 LGALSL (ENSPMJG00000002274) #36 PELI1 (ENSPMJG00000002305) #37 VPS54 (ENSPMJG00000002369) UGP2 (ENSPMJG00000002442) MDH1 (ENSPMJG00000002452) Passeriformes_d ANCESTRAL SPECIES 32 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Passeriformes_g ANCESTRAL SPECIES 42 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Passeroidea ANCESTRAL SPECIES 41 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Zebra finch MODERN SPECIES 23 ENSTGUG00000002422 ENSTGUG00000020896 ENSTGUG00000023714 ENSTGUG00000028808 PCSK2 (ENSTGUG00000002403) BFSP1 (ENSTGUG00000002401) ENSTGUG00000002397 ENSTGUG00000028491 #14 APLF (ENSTGUG00000028592) #15 FBXO48 (ENSTGUG00000026746) #16 PLEK (ENSTGUG00000002380) #17 CNRIP1 (ENSTGUG00000021224) #18 PPP3R1 (ENSTGUG00000018231) #19 PNO1 (ENSTGUG00000002369) #20 DNAAF10 (ENSTGUG00000018213) #21 C1D (ENSTGUG00000029046) #22 ENSTGUG00000002363 #24 MEIS1 (ENSTGUG00000002353) #25 SPRED2 (ENSTGUG00000025635) #28 ACTR2 (ENSTGUG00000002335) #29 RAB1A (ENSTGUG00000002328) #30 CEP68 (ENSTGUG00000029210) #31 SLC1A4 (ENSTGUG00000002315) #32 SERTAD2 (ENSTGUG00000024469) #33 AFTPH (ENSTGUG00000002302) #35 ENSTGUG00000025533 #34 LGALSL (ENSTGUG00000025180) #36 PELI1 (ENSTGUG00000002289) #37 VPS54 (ENSTGUG00000002268) UGP2 (ENSTGUG00000002252) MDH1 (ENSTGUG00000002244) Common canary MODERN SPECIES 38 FBXO48 (ENSSCAG00000001107) #16 PLEK (ENSSCAG00000001096) #17 CNRIP1 (ENSSCAG00000001087) #18 PPP3R1 (ENSSCAG00000001078) #19 PNO1 (ENSSCAG00000001058) #20 DNAAF10 (ENSSCAG00000001039) #21 C1D (ENSSCAG00000001030) #22 ENSSCAG00000001019 #24 ENSSCAG00000001007 #24 MEIS1 (ENSSCAG00000000987) #25 SPRED2 (ENSSCAG00000000973) #28 ACTR2 (ENSSCAG00000000959) #29 RAB1A (ENSSCAG00000000941) #30 CEP68 (ENSSCAG00000000934) #31 SLC1A4 (ENSSCAG00000000927) #32 SERTAD2 (ENSSCAG00000000919) #33 ENSSCAG00000000909 #34 AFTPH (ENSSCAG00000000895) #35 LGALSL (ENSSCAG00000000875) #36 PELI1 (ENSSCAG00000000846) #37 VPS54 (ENSSCAG00000000820) UGP2 (ENSSCAG00000000799) Medium ground finch MODERN SPECIES 99 SNRPB2 (ENSGFOG00000007717) PCSK2 (ENSGFOG00000007699) BFSP1 (ENSGFOG00000007688) ENSGFOG00000007642 ENSGFOG00000007636 #14 APLF (ENSGFOG00000007622) #15 FBXO48 (ENSGFOG00000007610) #16 PLEK (ENSGFOG00000007591) #17 CNRIP1 (ENSGFOG00000007585) #18 PPP3R1 (ENSGFOG00000007577) #19 PNO1 (ENSGFOG00000007572) #20 DNAAF10 (ENSGFOG00000007564) #21 C1D (ENSGFOG00000007555) #22 ENSGFOG00000007544 #24 MEIS1 (ENSGFOG00000007474) #25 SPRED2 (ENSGFOG00000007456) #28 ACTR2 (ENSGFOG00000007444) #29 RAB1A (ENSGFOG00000007437) #30 CEP68 (ENSGFOG00000007430) #31 SLC1A4 (ENSGFOG00000007417) #32 SERTAD2 (ENSGFOG00000007413) #33 ENSGFOG00000007408 #34 AFTPH (ENSGFOG00000007395) #35 LGALSL (ENSGFOG00000007383) #36 PELI1 (ENSGFOG00000007371) #37 VPS54 (ENSGFOG00000011155) UGP2 (ENSGFOG00000011150) MDH1 (ENSGFOG00000011139) Flycatcher MODERN SPECIES 21 ENSFALG00000013671 SNRPB2 (ENSFALG00000013668) ENSFALG00000013666 ENSFALG00000013664 ENSFALG00000026914 BFSP1 (ENSFALG00000013661) ENSFALG00000013658 PROKR1 (ENSFALG00000027536) #14 APLF (ENSFALG00000013652) #15 ENSFALG00000028459 #16 PLEK (ENSFALG00000013650) #17 CNRIP1 (ENSFALG00000027124) #18 PPP3R1 (ENSFALG00000013648) #19 WDR92 (ENSFALG00000028071) #21 PNO1 (ENSFALG00000029069) #20 C1D (ENSFALG00000024869) #22 ENSFALG00000013638 #24 MEIS1 (ENSFALG00000013636) #25 SPRED2 (ENSFALG00000028802) #28 ACTR2 (ENSFALG00000026727) #29 ENSFALG00000027263 RAB1A (ENSFALG00000023532) #30 CEP68 (ENSFALG00000013621) #31 SLC1A4 (ENSFALG00000013619) #32 SERTAD2 (ENSFALG00000014149) #33 ENSFALG00000028308 #34 AFTPH (ENSFALG00000013616) #35 LGALSL (ENSFALG00000013611) #36 PELI1 (ENSFALG00000013605) #37 VPS54 (ENSFALG00000013599) UGP2 (ENSFALG00000013598) Neognathae_c ANCESTRAL SPECIES 35 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Golden eagle MODERN SPECIES 24 FLRT3 (ENSACCG00020006489) ENSACCG00020006473 KIF16B (ENSACCG00020006377) SNRPB2 (ENSACCG00020006344) OTOR (ENSACCG00020006336) PCSK2 (ENSACCG00020006307) BFSP1 (ENSACCG00020006284) ENSACCG00020006272 #14 APLF (ENSACCG00020006257) #15 FBXO48 (ENSACCG00020006254) #16 PLEK (ENSACCG00020006245) #17 CNRIP1 (ENSACCG00020006234) #18 PPP3R1 (ENSACCG00020006223) #19 PNO1 (ENSACCG00020006212) #20 DNAAF10 (ENSACCG00020006200) #21 C1D (ENSACCG00020006189) #22 ENSACCG00020006175 #24 MEIS1 (ENSACCG00020006130) #25 SPRED2 (ENSACCG00020006109) #28 ACTR2 (ENSACCG00020006080) #29 RAB1A (ENSACCG00020006051) #30 CEP68 (ENSACCG00020006029) #31 SLC1A4 (ENSACCG00020006005) #32 SERTAD2 (ENSACCG00020005994) #33 ENSACCG00020005980 #34 AFTPH (ENSACCG00020005956) #35 LGALSL (ENSACCG00020005930) #36 PELI1 (ENSACCG00020005906) #37 VPS54 (ENSACCG00020005801) UGP2 (ENSACCG00020005728) MDH1 (ENSACCG00020005699) Kakapo MODERN SPECIES 23 ENSSHBG00005015373 SNRPB2 (ENSSHBG00005015326) OTOR (ENSSHBG00005015318) ENSSHBG00005015311 PCSK2 (ENSSHBG00005015307) BFSP1 (ENSSHBG00005015297) ENSSHBG00005015289 #14 ENSSHBG00005015282 APLF (ENSSHBG00005015272) #15 FBXO48 (ENSSHBG00005015269) #16 PLEK (ENSSHBG00005015261) #17 CNRIP1 (ENSSHBG00005015258) #18 PPP3R1 (ENSSHBG00005015250) #19 PNO1 (ENSSHBG00005015242) #20 DNAAF10 (ENSSHBG00005015235) #21 C1D (ENSSHBG00005015222) #22 ENSSHBG00005015207 #24 MEIS1 (ENSSHBG00005015189) #25 ENSSHBG00005015181 SPRED2 (ENSSHBG00005015173) #28 ACTR2 (ENSSHBG00005015166) #29 RAB1A (ENSSHBG00005015159) #30 CEP68 (ENSSHBG00005015142) #31 SLC1A4 (ENSSHBG00005015130) #32 SERTAD2 (ENSSHBG00005015121) #33 ENSSHBG00005015104 #34 AFTPH (ENSSHBG00005015097) #35 LGALSL (ENSSHBG00005015090) #36 PELI1 (ENSSHBG00005015086) #37 ENSSHBG00005015079 VPS54 (ENSSHBG00005015051) African ostrich MODERN SPECIES 1035 ENSSCUG00000016844 APLF (ENSSCUG00000016843) #15 FBXO48 (ENSSCUG00000016842) #16 PLEK (ENSSCUG00000016840) #17 CNRIP1 (ENSSCUG00000016838) #18 PPP3R1 (ENSSCUG00000016836) #19 PNO1 (ENSSCUG00000016819) #20 DNAAF10 (ENSSCUG00000016805) #21 C1D (ENSSCUG00000016803) #22 ENSSCUG00000016796 #24 ENSSCUG00000016785 #25 SPRED2 (ENSSCUG00000016776) #28 ACTR2 (ENSSCUG00000016771) #29 RAB1A (ENSSCUG00000016768) #30 ENSSCUG00000016764 #31 SLC1A4 (ENSSCUG00000016756) #32 SERTAD2 (ENSSCUG00000016748) #33 ENSSCUG00000016745 #34 AFTPH (ENSSCUG00000016739) #35 LGALSL (ENSSCUG00000016734) #36 PELI1 (ENSSCUG00000016725) #37 VPS54 (ENSSCUG00000016720) UGP2 (ENSSCUG00000016718) MDH1 (ENSSCUG00000016711) Australian saltwater crocodile MODERN SPECIES 60 FLRT3 (ENSCPRG00005012390) ENSCPRG00005012460 KIF16B (ENSCPRG00005012529) SNRPB2 (ENSCPRG00005012601) OTOR (ENSCPRG00005012606) PCSK2 (ENSCPRG00005012678) BFSP1 (ENSCPRG00005012685) ENSCPRG00005012710 #14 APLF (ENSCPRG00005012739) #15 FBXO48 (ENSCPRG00005012746) #16 PLEK (ENSCPRG00005012755) #17 CNRIP1 (ENSCPRG00005012769) #18 PPP3R1 (ENSCPRG00005012773) #19 PNO1 (ENSCPRG00005012776) #20 DNAAF10 (ENSCPRG00005012802) #21 C1D (ENSCPRG00005012813) #22 ENSCPRG00005012839 #24 MEIS1 (ENSCPRG00005012878) #25 ENSCPRG00005012911 SPRED2 (ENSCPRG00005012941) #28 ACTR2 (ENSCPRG00005012952) #29 ENSCPRG00005012975 RAB1A (ENSCPRG00005012987) #30 CEP68 (ENSCPRG00005012992) #31 SLC1A4 (ENSCPRG00005013000) #32 SERTAD2 (ENSCPRG00005013016) #33 AFTPH (ENSCPRG00005013021) #35 ENSCPRG00005013030 #34 LGALSL (ENSCPRG00005013037) #36 ENSCPRG00005013039 PELI1 (ENSCPRG00005013051) #37 Cryptodira ANCESTRAL SPECIES 49 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Testudinoidea ANCESTRAL SPECIES ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Emydidae ANCESTRAL SPECIES 41 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00950000183210.d.b ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00390000001858 #34 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B painted turtle MODERN SPECIES 860 ENSCPBG00000014505 ENSCPBG00000014464 PLEK (ENSCPBG00000014461) #17 PPP3R1 (ENSCPBG00000014459) #19 PNO1 (ENSCPBG00000014457) #20 DNAAF10 (ENSCPBG00000014454) #21 C1D (ENSCPBG00000014451) #22 ENSCPBG00000014446 #24 EIF2A (ENSCPBG00000014430) SERP1 (ENSCPBG00000014425) TSC22D2 (ENSCPBG00000014421) PFN2 (ENSCPBG00000014415) ENSCPBG00000014411 ANKUB1 (ENSCPBG00000014406) COMMD2 (ENSCPBG00000014405) WWTR1 (ENSCPBG00000014399) TM4SF4 (ENSCPBG00000014358) Three-toed box turtle MODERN SPECIES 62 FAM161A (ENSTMTG00000012663) ENSTMTG00000012654 CCT4 (ENSTMTG00000012621) SNRPB2 (ENSTMTG00000012597) OTOR (ENSTMTG00000012579) PCSK2 (ENSTMTG00000012469) BFSP1 (ENSTMTG00000012375) ENSTMTG00000012352 #14 ENSTMTG00000012328 #15 FBXO48 (ENSTMTG00000012318) #16 PLEK (ENSTMTG00000012307) #17 CNRIP1 (ENSTMTG00000012284) #18 PPP3R1 (ENSTMTG00000012270) #19 PNO1 (ENSTMTG00000012253) #20 DNAAF10 (ENSTMTG00000012232) #21 C1D (ENSTMTG00000012215) #22 ENSTMTG00000012204 ENSTMTG00000012186 #24 ENSTMTG00000012173 MEIS1 (ENSTMTG00000012126) #25 ENSTMTG00000012102 SPRED2 (ENSTMTG00000012084) #28 ACTR2 (ENSTMTG00000012053) #29 RAB1A (ENSTMTG00000012038) #30 CEP68 (ENSTMTG00000012027) #31 ENSTMTG00000012010 #32 SERTAD2 (ENSTMTG00000012002) #33 ENSTMTG00000011985 #34 AFTPH (ENSTMTG00000011932) #35 LGALSL (ENSTMTG00000011905) #36 PELI1 (ENSTMTG00000011887) #37 Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a.d #35 ENSGT00390000001858 #34 ENSGT00940000154186.a.c #35 ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B Goode s thornscrub tortoise MODERN SPECIES 17 XPO1 (ENSGEVG00005003539) FAM161A (ENSGEVG00005003560) CCT4 (ENSGEVG00005003573) SNRPB2 (ENSGEVG00005003591) OTOR (ENSGEVG00005003604) PCSK2 (ENSGEVG00005003616) BFSP1 (ENSGEVG00005003651) ENSGEVG00005003685 #14 APLF (ENSGEVG00005003695) #15 FBXO48 (ENSGEVG00005003719) #16 PLEK (ENSGEVG00005003733) #17 CNRIP1 (ENSGEVG00005003746) #18 PPP3R1 (ENSGEVG00005003753) #19 PNO1 (ENSGEVG00005003766) #20 DNAAF10 (ENSGEVG00005003777) #21 C1D (ENSGEVG00005003784) #22 ENSGEVG00005003795 #24 MEIS1 (ENSGEVG00005003813) #25 SPRED2 (ENSGEVG00005003835) #28 ACTR2 (ENSGEVG00005003844) #29 RAB1A (ENSGEVG00005003898) #30 CEP68 (ENSGEVG00005003967) #31 SLC1A4 (ENSGEVG00005004113) #32 SERTAD2 (ENSGEVG00005004127) #33 ENSGEVG00005004141 #35 ENSGEVG00005004165 #35 ENSGEVG00005004188 LGALSL (ENSGEVG00005004215) #36 PELI1 (ENSGEVG00005004247) #37 VPS54 (ENSGEVG00005004270) UGP2 (ENSGEVG00005004320) Abingdon island giant tortoise MODERN SPECIES 2362 PPP3R1 (ENSCABG00000002502) #19 ENSCABG00000002501 #20 DNAAF10 (ENSCABG00000002500) #21 C1D (ENSCABG00000002499) #22 ENSCABG00000002496 #24 ENSCABG00000002495 #25 MEIS1 (ENSCABG00000002390) #25 SPRED2 (ENSCABG00000002328) #28 ACTR2 (ENSCABG00000002179) #29 RAB1A (ENSCABG00000002171) #30 ENSCABG00000002170 SLC1A4 (ENSCABG00000002166) #32 ENSCABG00000002163 Chinese turtle MODERN SPECIES 375 APLF (ENSPSIG00000011567) #15 FBXO48 (ENSPSIG00000011431) #16 PLEK (ENSPSIG00000010697) #17 CNRIP1 (ENSPSIG00000010556) #18 PPP3R1 (ENSPSIG00000010550) #19 PNO1 (ENSPSIG00000010533) #20 DNAAF10 (ENSPSIG00000010344) #21 C1D (ENSPSIG00000010015) #22 ENSPSIG00000001231 ENSPSIG00000009822 #24 ENSPSIG00000001224 MEIS1 (ENSPSIG00000009187) #25 SPRED2 (ENSPSIG00000008800) #28 ACTR2 (ENSPSIG00000008124) #29 RAB1A (ENSPSIG00000008028) #30 CEP68 (ENSPSIG00000007957) #31 SLC1A4 (ENSPSIG00000017947) #32 SERTAD2 (ENSPSIG00000017893) #33 AFTPH (ENSPSIG00000017890) #35 LGALSL (ENSPSIG00000017748) #36 ENSPSIG00000017632 PELI1 (ENSPSIG00000017442) #37 VPS54 (ENSPSIG00000016091) Anura ANCESTRAL SPECIES 16 ENSGT00940000159704 ENSGT00940000176188 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 #14 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327 #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000154347.a ENSGT00940000155337 #36 ENSGT00950000183050.b.b.a #37 ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Frog MODERN SPECIES 5 flrt3 (ENSXETG00000008706) ENSXETG00000048798 kif16b (ENSXETG00000003551) snrpb2 (ENSXETG00000003550) otor (ENSXETG00000003548) pcsk2 (ENSXETG00000003545) bfsp1 (ENSXETG00000003544) ENSXETG00000017361 #14 aplf (ENSXETG00000025938) #15 fbxo48 (ENSXETG00000037084) #16 plek (ENSXETG00000017358) #17 cnrip1 (ENSXETG00000035745) #18 ppp3r1 (ENSXETG00000017355) #19 pno1 (ENSXETG00000017349) #20 dnaaf10 (ENSXETG00000046703) #21 c1d (ENSXETG00000025934) #22 etaa1 (ENSXETG00000025932) #24 meis1 (ENSXETG00000011473) #25 ENSXETG00000044979 spred2 (ENSXETG00000014000) #28 actr2 (ENSXETG00000014001) #29 rab1a (ENSXETG00000014011) cep68 (ENSXETG00000031207) #31 slc1a4 (ENSXETG00000014014) #32 sertad2 (ENSXETG00000014022) #33 aftph (ENSXETG00000014023) #35 ENSXETG00000036875 sys1 (ENSXETG00000047554) lgalsl (ENSXETG00000025808) #36 ENSXETG00000044468 ENSXETG00000038106 Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000011270 SUSD4 (ENSLLEG00000011152) ENSLLEG00000011106 ENSLLEG00000011094 ENSLLEG00000011049 ENSLLEG00000011025 ENSLLEG00000010919 ENSLLEG00000010894 ENSLLEG00000010885 ENSLLEG00000010836 ENSLLEG00000010796 CNRIP1 (ENSLLEG00000010763) #18 PPP3R1 (ENSLLEG00000010614) #19 PNO1 (ENSLLEG00000010509) #20 DNAAF10 (ENSLLEG00000010419) #21 C1D (ENSLLEG00000010381) #22 ENSLLEG00000010364 ENSLLEG00000010276 #24 ENSLLEG00000010259 MEIS1 (ENSLLEG00000009890) #25 ENSLLEG00000009839 SPRED2 (ENSLLEG00000009649) #28 ENSLLEG00000009622 ACTR2 (ENSLLEG00000009396) #29 RAB1B (ENSLLEG00000009169) ENSLLEG00000009114 #31 SLC1A4 (ENSLLEG00000009051) #32 SERTAD2 (ENSLLEG00000009029) #33 AFTPH (ENSLLEG00000008756) #35 SYS1 (ENSLLEG00000008712) LGALSL (ENSLLEG00000008554) #36 Coelacanth MODERN SPECIES 1354 DNAAF10 (ENSLACG00000003030) #21 PNO1 (ENSLACG00000004983) #20 ENSLACG00000006183 C1D (ENSLACG00000007516) #22 Actinopterygii ANCESTRAL SPECIES 19 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00660000097267 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327.l #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.b ##37 ENSGT00390000000583 Reedfish MODERN SPECIES 6 ENSECRG00000020918 vrk2 (ENSECRG00000020854) fancl (ENSECRG00000020815) bcl11aa (ENSECRG00000020774) papolg (ENSECRG00000020728) rel (ENSECRG00000020700) ENSECRG00000020676 ENSECRG00000020656 pex13 (ENSECRG00000020640) SANBR (ENSECRG00000020613) ENSECRG00000020605 USP34 (ENSECRG00000020472) dnaaf10 (ENSECRG00000020385) #21 pno1 (ENSECRG00000020369) #20 ints9 (ENSECRG00000020351) c1d (ENSECRG00000020336) #22 ENSECRG00000020320 #24 meis1b (ENSECRG00000020236) #25 spred2b (ENSECRG00000020195) #28 ACTR2 (ENSECRG00000020143) #29 zgc:153169 (ENSECRG00000020103) rab1ab (ENSECRG00000020049) ENSECRG00000020001 #31 sertad2b (ENSECRG00000019987) #33 aftpha (ENSECRG00000019951) #35 lgalslb (ENSECRG00000019917) #36 ENSECRG00000019880 ##37 vps54 (ENSECRG00000019821) ugp2a (ENSECRG00000019749) mdh1ab (ENSECRG00000019698) ENSECRG00000019668 Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327.l #25 ENSGT00940000156841 #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a #35 ENSGT00940000155337 #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.b ##37 ENSGT00390000000583 Spotted gar MODERN SPECIES 654 flrt3 (ENSLOCG00000017360) KIF16B (ENSLOCG00000015987) SNRPB2 (ENSLOCG00000015992) OTOR (ENSLOCG00000015995) pcsk2 (ENSLOCG00000015998) BFSP1 (ENSLOCG00000016001) prokr1b (ENSLOCG00000016003) APLF (ENSLOCG00000016006) #15 fbxo48 (ENSLOCG00000016009) #16 plek (ENSLOCG00000016011) #17 cnrip1a (ENSLOCG00000016014) #18 ppp3r1a (ENSLOCG00000016015) #19 pno1 (ENSLOCG00000016017) #20 dnaaf10 (ENSLOCG00000016020) #21 ENSLOCG00000016022 c1d (ENSLOCG00000016024) #22 ENSLOCG00000016025 #24 meis1b (ENSLOCG00000016026) #25 spred2b (ENSLOCG00000016028) #28 actr2a (ENSLOCG00000016032) #29 zgc:153169 (ENSLOCG00000016036) rab1ab (ENSLOCG00000016037) cep68 (ENSLOCG00000016038) #31 slc1a4 (ENSLOCG00000016041) #32 sertad2b (ENSLOCG00000017361) #33 AFTPH (ENSLOCG00000016046) #35 lgalslb (ENSLOCG00000016049) #36 ENSLOCG00000016051 ENSLOCG00000016053 ##37 vps54 (ENSLOCG00000016056) ugp2a (ENSLOCG00000016059) Osteoglossocephalai ANCESTRAL SPECIES 39 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000176188 ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00390000010591 #15 ENSGT00390000012248 #16 ENSGT00940000157885 #17 ENSGT00390000004284 #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597 #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b #33 ENSGT00940000154186.a.r #35 ENSGT00390000001858 #34 ENSGT00940000177082 ENSGT00940000155337.`b #36 ENSGT00390000000583 Osteoglossiformes ANCESTRAL SPECIES 128 ENSGT00940000159062.a ENSGT00950000183045.B ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704.e ENSGT00940000162838.g.a ENSGT00390000007046.b.b.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965.a ENSGT00390000016976.a ENSGT00940000166657 ENSGT00940000157885.i #17 ENSGT00390000004284 #18 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00940000156327.k #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.f #29 P. kingsleyae MODERN SPECIES 11 ENSPKIG00000005198 OTOR (ENSPKIG00000005251) ENSPKIG00000005135 pcsk2 (ENSPKIG00000005087) ENSPKIG00000005067 prokr1b (ENSPKIG00000005050) plek (ENSPKIG00000005025) #17 cnrip1a (ENSPKIG00000005004) #18 ENSPKIG00000004958 #19 dnaaf10 (ENSPKIG00000004908) #21 c1d (ENSPKIG00000004877) #22 ENSPKIG00000004852 SPRED2 (ENSPKIG00000004810) #28 ACTR2 (ENSPKIG00000004770) #29 zgc:153169 (ENSPKIG00000004744) rab1ab (ENSPKIG00000004714) cep68 (ENSPKIG00000004675) #31 slc1a4 (ENSPKIG00000004639) #32 ENSPKIG00000004619 #33 ENSPKIG00000004596 #35 LGALSL (ENSPKIG00000004562) #36 ENSPKIG00000004509 ENSPKIG00000004483 ##37 ugp2b (ENSPKIG00000004404) mdh1ab (ENSPKIG00000004347) WDPCP (ENSPKIG00000004302) Asian bonytongue MODERN SPECIES 19 tasp1 (ENSSFOG00015010078) ENSSFOG00015031537 esf1 (ENSSFOG00015010145) ndufaf5 (ENSSFOG00015010167) flrt3 (ENSSFOG00015010370) MACROD2 (ENSSFOG00015010225) KIF16B (ENSSFOG00015010383) ENSSFOG00015010475 OTOR (ENSSFOG00015010508) pcsk2 (ENSSFOG00015010552) BFSP1 (ENSSFOG00015010667) prokr1b (ENSSFOG00015010694) cnrip1a (ENSSFOG00015010755) #18 plek (ENSSFOG00015010711) #17 dnaaf10 (ENSSFOG00015010775) #21 c1d (ENSSFOG00015010861) #22 ENSSFOG00015010893 #25 SPRED2 (ENSSFOG00015032832) #28 ACTR2 (ENSSFOG00015011048) #29 zgc:153169 (ENSSFOG00015011091) ENSSFOG00015032633 cep68 (ENSSFOG00015028803) #31 SLC1A4 (ENSSFOG00015011220) #32 ENSSFOG00015028900 #33 ENSSFOG00015011233 ENSSFOG00015027086 #35 lgalsla (ENSSFOG00015028463) #36 ENSSFOG00015011260 ENSSFOG00015032922 ##37 ugp2a (ENSSFOG00015011405) MDH1 (ENSSFOG00015011431) Clupeocephala ANCESTRAL SPECIES 37 ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000175262 ENSGT00940000155636.a ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 #17 ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556 #29 ENSGT00940000154958 #30 ENSGT00530000063867.b #33 ENSGT00940000154186.a.r #35 ENSGT00390000001858 #34 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00940000155078.a.b.a.a ENSGT00940000177082 ENSGT00940000155337.`b #36 ENSGT00950000183050.b.b.b.a.a.a.b ##37 Euteleosteomorpha ANCESTRAL SPECIES 207 ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Acanthomorphata ANCESTRAL SPECIES 114 ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b.c ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00940000168989 ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Euacanthomorphacea ANCESTRAL SPECIES 57 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Percomorphaceae ANCESTRAL SPECIES 46 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00950000183029.A ENSGT00400000024746 ENSGT00940000164334 ENSGT00940000162741 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Aplocheiloidei ANCESTRAL SPECIES 22 ENSGT00940000157784.d ENSGT00940000156598.c.a ENSGT00390000010738 ENSGT00550000074922 ENSGT00390000005826.a.b.h.a ENSGT00940000155428.b ENSGT00390000001607 ENSGT01090000260080.a ENSGT00940000153691.a.a ENSGT00940000156851.d ENSGT00390000001859.f ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a.d.b ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Mangrove rivulus MODERN SPECIES 3 tk2 (ENSKMAG00000014472) aprt (ENSKMAG00000014493) CDT1 (ENSKMAG00000014516) PIEZO1 (ENSKMAG00000014558) pcca (ENSKMAG00000014632) ENSKMAG00000014693 vps8 (ENSKMAG00000014713) chchd1 (ENSKMAG00000014770) ENSKMAG00000014848 galm (ENSKMAG00000014893) HNRNPLL (ENSKMAG00000014974) cdk1 (ENSKMAG00000014999) ctu2 (ENSKMAG00000015016) ENSKMAG00000015037 ENSKMAG00000015052 c1d (ENSKMAG00000015077) #22 ENSKMAG00000015108 #24 meis1b (ENSKMAG00000015139) #25 SPRED2 (ENSKMAG00000015205) #28 actr2a (ENSKMAG00000015243) #29 ENSKMAG00000015281 ENSKMAG00000015301 ENSKMAG00000015310 lgalslb (ENSKMAG00000015333) #36 ENSKMAG00000015381 peli1b (ENSKMAG00000015451) ##37 ugp2b (ENSKMAG00000015475) mdh1aa (ENSKMAG00000015513) WDPCP (ENSKMAG00000015541) otx1 (ENSKMAG00000015570) EHBP1 (ENSKMAG00000015630) Turquoise killifish MODERN SPECIES 1612 ENSNFUG00015009834 ENSNFUG00015009797 ENSNFUG00015009790 ENSNFUG00015009783 ENSNFUG00015009778 cdh11 (ENSNFUG00015009107) ENSNFUG00015008958 ENSNFUG00015008948 CHRNA1 (ENSNFUG00015024488) LNPB (ENSNFUG00015024477) CNRIP1B (ENSNFUG00015024470) #18 ppp3r1a (ENSNFUG00015024460) #19 ENSNFUG00015024455 pno1 (ENSNFUG00015024451) #20 dnaaf10 (ENSNFUG00015024444) #21 c1d (ENSNFUG00015024438) #22 ENSNFUG00015024436 ENSNFUG00015024428 ETAA1 (ENSNFUG00015024421) meis1b (ENSNFUG00015024373) #25 ENSNFUG00015024358 ENSNFUG00015024354 SPRED2A (ENSNFUG00015024353) #28 ACTR2 (ENSNFUG00015024344) #29 AFTPHA (ENSNFUG00015024338) ENSNFUG00015024333 lgalslb (ENSNFUG00015024326) #36 ENSNFUG00015024317 PELI1B (ENSNFUG00015024315) ##37 ugp2b (ENSNFUG00015024190) mdh1aa (ENSNFUG00015024144) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l.q #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Poecilia ANCESTRAL SPECIES 11 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291.d ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l.q #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 NAME_6 ANCESTRAL SPECIES 174 ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291.d ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00660000097267 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l.r #25 Amazon molly MODERN SPECIES 292 slc8a1b (ENSPFOG00000006514) ENSPFOG00000023250 ENSPFOG00000006461 MAP4K3 (ENSPFOG00000005304) ENSPFOG00000005124 ENSPFOG00000005109 slc17a5 (ENSPFOG00000004867) EEF1A1 (ENSPFOG00000004725) CGAS (ENSPFOG00000004678) ddx43 (ENSPFOG00000004241) KCNQ5 (ENSPFOG00000003981) cnrip1b (ENSPFOG00000023191) #18 pno1 (ENSPFOG00000003843) #20 ppp3r1a (ENSPFOG00000003706) #19 ENSPFOG00000021698 c1d (ENSPFOG00000003686) #22 ENSPFOG00000003680 #24 meis1b (ENSPFOG00000003364) #25 Sailfin molly MODERN SPECIES 2564 c1d (ENSPLAG00000000228) #22 Guppy MODERN SPECIES 445 malb (ENSPREG00000001744) mrps5 (ENSPREG00000001722) slc8a1b (ENSPREG00000001659) ENSPREG00000001603 MAP4K3 (ENSPREG00000001518) ENSPREG00000001493 slc17a5 (ENSPREG00000001453) EEF1A1 (ENSPREG00000001416) CGAS (ENSPREG00000001034) ddx43 (ENSPREG00000000923) KCNQ5 (ENSPREG00000000873) cnrip1b (ENSPREG00000000842) #18 ppp3r1a (ENSPREG00000000832) #19 pno1 (ENSPREG00000000793) #20 dnaaf10 (ENSPREG00000000779) #21 c1d (ENSPREG00000000742) #22 ENSPREG00000000726 #24 meis1b (ENSPREG00000000691) #25 SPRED2 (ENSPREG00000000651) #28 actr2a (ENSPREG00000000566) #29 ENSPREG00000021487 #35 ENSPREG00000021483 lgalslb (ENSPREG00000021476) #36 ENSPREG00000021444 peli1b (ENSPREG00000021412) ##37 ugp2b (ENSPREG00000021393) MDH1 (ENSPREG00000021368) WDPCP (ENSPREG00000021349) otx1 (ENSPREG00000021337) EHBP1 (ENSPREG00000021321) b3gnt2b (ENSPREG00000021300) Platyfish MODERN SPECIES 14 mrps5 (ENSXMAG00000028833) slc8a1b (ENSXMAG00000017251) ENSXMAG00000017249 MAP4K3 (ENSXMAG00000017170) ENSXMAG00000017168 ENSXMAG00000026195 slc17a5 (ENSXMAG00000017162) EEF1A1 (ENSXMAG00000017149) CGAS (ENSXMAG00000028055) ddx43 (ENSXMAG00000017126) KCNQ5 (ENSXMAG00000024491) cnrip1b (ENSXMAG00000024487) #18 ppp3r1a (ENSXMAG00000022836) #19 pno1 (ENSXMAG00000021459) #20 dnaaf10 (ENSXMAG00000029168) #21 c1d (ENSXMAG00000022273) #22 ENSXMAG00000027599 meis1b (ENSXMAG00000011739) #25 ENSXMAG00000029931 SPRED2 (ENSXMAG00000011804) #28 actr2a (ENSXMAG00000011813) #29 ENSXMAG00000029191 #35 ENSXMAG00000025365 ENSXMAG00000029735 lgalslb (ENSXMAG00000011845) #36 peli1b (ENSXMAG00000022686) ##37 ENSXMAG00000027229 ugp2b (ENSXMAG00000005551) MDH1 (ENSXMAG00000005571) WDPCP (ENSXMAG00000005591) otx1 (ENSXMAG00000005604) NAME_4 ANCESTRAL SPECIES 132 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Sheepshead minnow MODERN SPECIES 1063 c1d (ENSCVAG00000004603) #22 ENSCVAG00000004586 Mummichog MODERN SPECIES 2306 cnrip1b (ENSFHEG00000010430) #18 ppp3r1a (ENSFHEG00000010442) #19 pno1 (ENSFHEG00000010487) #20 dnaaf10 (ENSFHEG00000010502) #21 c1d (ENSFHEG00000010545) #22 ENSFHEG00000010566 #24 meis1b (ENSFHEG00000010659) #25 SPRED2 (ENSFHEG00000000242) #28 ENSFHEG00000010786 actr2a (ENSFHEG00000010852) #29 ENSFHEG00000010863 #35 ENSFHEG00000010874 ENSFHEG00000010883 ENSFHEG00000010885 lgalslb (ENSFHEG00000010890) #36 ENSFHEG00000010952 peli1b (ENSFHEG00000011027) ##37 ugp2b (ENSFHEG00000011098) MDH1 (ENSFHEG00000011156) WDPCP (ENSFHEG00000011173) Oryzias ANCESTRAL SPECIES 6 ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT01030000235154 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000155337.ab #36 ENSGT01100000263533.b.a.a.a ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000157824.i.b Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000159084 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.c.a ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT01030000235154 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000155337.ab #36 ENSGT01100000263533.b.a.a.a ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000157824.i.b Japanese Medaka HdrR MODERN SPECIES 6 ENSORLG00000026999 slc30a6 (ENSORLG00000002108) sult6b1 (ENSORLG00000022898) ENSORLG00000002138 MAP4K3 (ENSORLG00000002196) ENSORLG00000026157 slc17a5 (ENSORLG00000002237) eef1a1a (ENSORLG00000002258) ENSORLG00000021960 ddx43 (ENSORLG00000002267) KCNQ5 (ENSORLG00000002279) cnrip1b (ENSORLG00000025748) #18 ppp3r1a (ENSORLG00000002343) #19 pno1 (ENSORLG00000002371) #20 dnaaf10 (ENSORLG00000030098) #21 c1d (ENSORLG00000021968) #22 ENSORLG00000030003 ENSORLG00000026767 ENSORLG00000023223 meis1b (ENSORLG00000002411) #25 SPRED2 (ENSORLG00000002435) #28 actr2a (ENSORLG00000002451) #29 lgalslb (ENSORLG00000028938) #36 ENSORLG00000022965 ENSORLG00000027511 peli1b (ENSORLG00000002477) ##37 ugp2b (ENSORLG00000002512) mdh1ab (ENSORLG00000002524) WDPCP (ENSORLG00000029431) otx1 (ENSORLG00000028142) EHBP1 (ENSORLG00000002562) Chinese medaka MODERN SPECIES 794 ENSOSIG00000015655 slc30a6 (ENSOSIG00000014727) sult6b1 (ENSOSIG00000014710) ENSOSIG00000014709 MAP4K3 (ENSOSIG00000009685) ENSOSIG00000009628 slc17a5 (ENSOSIG00000009625) eef1a1a (ENSOSIG00000009623) ENSOSIG00000009621 ddx43 (ENSOSIG00000009443) ENSOSIG00000009435 cnrip1b (ENSOSIG00000009432) #18 ppp3r1a (ENSOSIG00000009392) #19 pno1 (ENSOSIG00000009390) #20 dnaaf10 (ENSOSIG00000009388) #21 c1d (ENSOSIG00000009385) #22 ENSOSIG00000009381 ENSOSIG00000009379 #25 SPRED2 (ENSOSIG00000009377) #28 actr2a (ENSOSIG00000009372) #29 LGALSL (ENSOSIG00000009371) #36 ENSOSIG00000009349 peli1b (ENSOSIG00000009346) ##37 ENSOSIG00000009345 MDH1 (ENSOSIG00000009213) WDPCP (ENSOSIG00000009212) otx1 (ENSOSIG00000009211) EHBP1 (ENSOSIG00000009187) b3gnt2b (ENSOSIG00000009174) Oryzias_b ANCESTRAL SPECIES 7 ENSGT00390000015405 #22 ENSGT01030000235154 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000157824.i.b ENSGT00940000157820.a.b.cb Indian medaka MODERN SPECIES pgrmc2 (ENSOMEG00000004227) asmt2 (ENSOMEG00000004237) jade1 (ENSOMEG00000004266) nsd2 (ENSOMEG00000004293) letm1 (ENSOMEG00000004367) ENSOMEG00000004388 rsph3 (ENSOMEG00000004427) ENSOMEG00000004505 fgfr3 (ENSOMEG00000004574) ENSOMEG00000004593 ENSOMEG00000000838 ENSOMEG00000004615 ENSOMEG00000004634 ENSOMEG00000004651 ENSOMEG00000004664 c1d (ENSOMEG00000004672) #22 foxi2 (ENSOMEG00000004683) EIF2AK3 (ENSOMEG00000004741) rpia (ENSOMEG00000004773) slc4a11 (ENSOMEG00000004833) ENSOMEG00000004858 ENSOMEG00000004869 ENSOMEG00000004883 ENSOMEG00000004893 ENSOMEG00000004897 ATRN (ENSOMEG00000004949) gfra4a (ENSOMEG00000004974) ap5s1 (ENSOMEG00000004985) esr2b (ENSOMEG00000005049) ENSOMEG00000005140 ENSOMEG00000005166 Javanese ricefish MODERN SPECIES 6 RAB11FIP2 (ENSOJAG00000019706) fam204a (ENSOJAG00000019712) ENSOJAG00000019721 SORBS1 (ENSOJAG00000019742) pdlim1 (ENSOJAG00000019801) neurog3 (ENSOJAG00000019814) sgpl1 (ENSOJAG00000019866) pcbd1 (ENSOJAG00000020064) ENSOJAG00000020077 si:dkey-192p21.6 (ENSOJAG00000020084) ret (ENSOJAG00000020105) ENSOJAG00000020239 csgalnact2 (ENSOJAG00000020288) ENSOJAG00000020324 ENSOJAG00000020334 c1d (ENSOJAG00000020345) #22 ENSOJAG00000020351 ENSOJAG00000020360 ENSOJAG00000020372 ENSOJAG00000020381 meis1b (ENSOJAG00000020400) #25 SPRED2 (ENSOJAG00000020417) #28 actr2a (ENSOJAG00000020442) #29 lgalslb (ENSOJAG00000020506) #36 ENSOJAG00000020511 peli1b (ENSOJAG00000001747) ##37 ugp2b (ENSOJAG00000001808) MDH1 (ENSOJAG00000001886) WDPCP (ENSOJAG00000002012) ENSOJAG00000002113 ENSOJAG00000002126 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Pomacentridae ANCESTRAL SPECIES 115 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01030000235205 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 Pomacentridae_A ANCESTRAL SPECIES 104 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000174754 ENSGT00950000183050.b.b.b.a.a.a.a ##37 Amphiprion ANCESTRAL SPECIES 128 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000174754 ENSGT00950000183050.b.b.b.a.a.a.a ##37 Orange clownfish MODERN SPECIES 12 mrps5 (ENSAPEG00000000853) slc8a1b (ENSAPEG00000000914) ENSAPEG00000000981 ENSAPEG00000000987 ENSAPEG00000000993 slc17a5 (ENSAPEG00000001012) ENSAPEG00000001056 EEF1A1 (ENSAPEG00000001072) CGAS (ENSAPEG00000001118) ddx43 (ENSAPEG00000001133) KCNQ5 (ENSAPEG00000001262) cnrip1b (ENSAPEG00000001341) #18 ppp3r1a (ENSAPEG00000001356) #19 pno1 (ENSAPEG00000001366) #20 dnaaf10 (ENSAPEG00000001394) #21 c1d (ENSAPEG00000001403) #22 ENSAPEG00000001417 #24 meis1b (ENSAPEG00000001438) #25 SPRED2 (ENSAPEG00000001488) #28 actr2a (ENSAPEG00000001530) #29 ENSAPEG00000001578 #35 ENSAPEG00000001612 lgalslb (ENSAPEG00000001619) #36 ENSAPEG00000001646 peli1b (ENSAPEG00000001720) ##37 ENSAPEG00000001743 ENSAPEG00000001773 mrpl57 (ENSAPEG00000001827) KCNH1 (ENSAPEG00000001838) hhat (ENSAPEG00000001904) MYOZ1 (ENSAPEG00000001946) Clown anemonefish MODERN SPECIES 1131 ENSAOCG00000020416 cnrip1b (ENSAOCG00000020405) #18 ppp3r1a (ENSAOCG00000001506) #19 pno1 (ENSAOCG00000020389) #20 dnaaf10 (ENSAOCG00000001503) #21 c1d (ENSAOCG00000020354) #22 Spiny chromis MODERN SPECIES 465 ENSAPOG00000005379 cnrip1b (ENSAPOG00000005397) #18 ppp3r1a (ENSAPOG00000005408) #19 pno1 (ENSAPOG00000005420) #20 dnaaf10 (ENSAPOG00000005430) #21 c1d (ENSAPOG00000005466) #22 ENSAPOG00000005477 #24 kcnk13b (ENSAPOG00000005529) Bicolor damselfish MODERN SPECIES 1156 dnaaf10 (ENSSPAG00000008589) #21 c1d (ENSSPAG00000008574) #22 ENSSPAG00000008559 #24 Cichlidae ANCESTRAL SPECIES 13 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 295 ENSNBRG00000011676 malb (ENSNBRG00000011605) mrps5 (ENSNBRG00000011584) slc8a1b (ENSNBRG00000011545) ENSNBRG00000011526 MAP4K3 (ENSNBRG00000011204) slc17a5 (ENSNBRG00000011078) ENSNBRG00000011060 ENSNBRG00000011042 ddx43 (ENSNBRG00000010942) ENSNBRG00000010894 cnrip1b (ENSNBRG00000010873) #18 ppp3r1a (ENSNBRG00000010865) #19 pno1 (ENSNBRG00000010839) #20 dnaaf10 (ENSNBRG00000010737) #21 c1d (ENSNBRG00000010704) #22 ENSNBRG00000010688 #24 meis1b (ENSNBRG00000010657) #25 SPRED2 (ENSNBRG00000010593) #28 actr2a (ENSNBRG00000010551) #29 ENSNBRG00000010532 #35 lgalslb (ENSNBRG00000010508) #36 ENSNBRG00000010455 peli1b (ENSNBRG00000010433) ##37 ugp2b (ENSNBRG00000010404) MDH1 (ENSNBRG00000010369) WDPCP (ENSNBRG00000010324) otx1 (ENSNBRG00000010309) EHBP1 (ENSNBRG00000010267) b3gnt2b (ENSNBRG00000010244) ENSNBRG00000009721 Lyretail cichlid MODERN SPECIES 143 c1d (ENSNBRG00000000221) #22 Haplochromini ANCESTRAL SPECIES 10 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000157824.i.b P. nyererei MODERN SPECIES 349 ENSPNYG00000009894 malb (ENSPNYG00000009877) mrps5 (ENSPNYG00000009861) slc8a1b (ENSPNYG00000009830) ENSPNYG00000009804 MAP4K3 (ENSPNYG00000009592) slc17a5 (ENSPNYG00000009447) EEF1A1 (ENSPNYG00000009404) CGAS (ENSPNYG00000009164) ddx43 (ENSPNYG00000009064) KCNQ5 (ENSPNYG00000009016) cnrip1b (ENSPNYG00000008998) #18 ppp3r1a (ENSPNYG00000008986) #19 pno1 (ENSPNYG00000008942) #20 dnaaf10 (ENSPNYG00000008828) #21 c1d (ENSPNYG00000008789) #22 ENSPNYG00000008771 #24 ENSPNYG00000008745 meis1b (ENSPNYG00000008708) #25 SPRED2 (ENSPNYG00000008682) #28 actr2a (ENSPNYG00000008624) #29 ENSPNYG00000008600 #35 lgalslb (ENSPNYG00000008578) #36 ENSPNYG00000008530 peli1b (ENSPNYG00000008495) ##37 ugp2b (ENSPNYG00000008441) MDH1 (ENSPNYG00000008390) ENSPNYG00000008363 otx1 (ENSPNYG00000008345) EHBP1 (ENSPNYG00000008205) b3gnt2b (ENSPNYG00000008156) Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000157824.i.b Eastern happy MODERN SPECIES 4 malb (ENSACLG00000025748) mrps5 (ENSACLG00000025759) slc8a1b (ENSACLG00000025808) ENSACLG00000025840 MAP4K3 (ENSACLG00000025938) ENSACLG00000026002 slc17a5 (ENSACLG00000026026) EEF1A1 (ENSACLG00000026047) CGAS (ENSACLG00000026073) ddx43 (ENSACLG00000026081) KCNQ5 (ENSACLG00000026094) cnrip1b (ENSACLG00000026147) #18 ppp3r1a (ENSACLG00000026154) #19 pno1 (ENSACLG00000026167) #20 dnaaf10 (ENSACLG00000026190) #21 c1d (ENSACLG00000026206) #22 ENSACLG00000026219 #24 meis1b (ENSACLG00000026249) #25 SPRED2 (ENSACLG00000026311) #28 actr2a (ENSACLG00000026334) #29 ENSACLG00000026357 lgalslb (ENSACLG00000026386) #36 ENSACLG00000026411 peli1b (ENSACLG00000026494) ##37 ugp2b (ENSACLG00000026535) MDH1 (ENSACLG00000026557) WDPCP (ENSACLG00000026647) otx1 (ENSACLG00000026686) EHBP1 (ENSACLG00000026697) b3gnt2b (ENSACLG00000026781) ENSACLG00000026787 Zebra mbuna MODERN SPECIES 1095 SYNPO2L (ENSMZEG00005027358) MYOZ1 (ENSMZEG00005027357) hhat (ENSMZEG00005027356) slc8a1b (ENSMZEG00005027355) ENSMZEG00005027354 MAP4K3 (ENSMZEG00005027353) slc17a5 (ENSMZEG00005027352) EEF1A1 (ENSMZEG00005027351) CGAS (ENSMZEG00005027350) ddx43 (ENSMZEG00005027349) KCNQ5 (ENSMZEG00005027348) cnrip1b (ENSMZEG00005027347) #18 ppp3r1a (ENSMZEG00005027346) #19 pno1 (ENSMZEG00005027345) #20 dnaaf10 (ENSMZEG00005027344) #21 c1d (ENSMZEG00005027343) #22 ENSMZEG00005027342 #24 meis1b (ENSMZEG00005027341) #25 SPRED2 (ENSMZEG00005027339) #28 actr2a (ENSMZEG00005027338) #29 ENSMZEG00005027337 #35 lgalslb (ENSMZEG00005027336) #36 ENSMZEG00005027335 peli1b (ENSMZEG00005027334) ##37 ugp2b (ENSMZEG00005027333) MDH1 (ENSMZEG00005027332) WDPCP (ENSMZEG00005027331) otx1 (ENSMZEG00005027330) ENSMZEG00005027329 EHBP1 (ENSMZEG00005027328) b3gnt2b (ENSMZEG00005027327) Burton s mouthbrooder MODERN SPECIES 318 cnrip1b (ENSHBUG00000018590) #18 ppp3r1a (ENSHBUG00000000555) #19 pno1 (ENSHBUG00000018572) #20 dnaaf10 (ENSHBUG00000018541) #21 c1d (ENSHBUG00000018531) #22 ENSHBUG00000018526 #24 meis1b (ENSHBUG00000018510) #25 SPRED2 (ENSHBUG00000018425) #28 actr2a (ENSHBUG00000018399) #29 ENSHBUG00000018375 #35 ENSHBUG00000018356 lgalslb (ENSHBUG00000018349) #36 ENSHBUG00000018319 peli1b (ENSHBUG00000018272) ##37 ugp2b (ENSHBUG00000018209) MDH1 (ENSHBUG00000001045) WDPCP (ENSHBUG00000018121) otx1 (ENSHBUG00000018104) EHBP1 (ENSHBUG00000018080) b3gnt2b (ENSHBUG00000018017) Nile tilapia MODERN SPECIES 4 mrps5 (ENSONIG00000001150) slc8a1b (ENSONIG00000001153) ENSONIG00000001165 MAP4K3 (ENSONIG00000001166) ENSONIG00000001180 slc17a5 (ENSONIG00000001181) EEF1A1 (ENSONIG00000041189) ddx43 (ENSONIG00000040886) EEF1A1 (ENSONIG00000035707) CGAS (ENSONIG00000040980) ddx43 (ENSONIG00000001195) KCNQ5 (ENSONIG00000001209) cnrip1b (ENSONIG00000001213) #18 pno1 (ENSONIG00000001223) #20 dnaaf10 (ENSONIG00000001214) #21 c1d (ENSONIG00000001233) #22 ENSONIG00000036908 #24 meis1b (ENSONIG00000001236) #25 SPRED2 (ENSONIG00000029966) #28 actr2a (ENSONIG00000001245) #29 ENSONIG00000039063 #35 ENSONIG00000030341 lgalslb (ENSONIG00000001248) #36 ENSONIG00000008025 ENSONIG00000032553 ENSONIG00000039754 ENSONIG00000004918 ENSONIG00000040742 ENSONIG00000039915 ENSONIG00000028845 ENSONIG00000041039 Midas cichlid MODERN SPECIES 230 malb (ENSACIG00000011521) mrps5 (ENSACIG00000011594) slc8a1b (ENSACIG00000011645) ENSACIG00000011677 MAP4K3 (ENSACIG00000011728) slc17a5 (ENSACIG00000011825) ENSACIG00000011849 EEF1A1 (ENSACIG00000011859) CGAS (ENSACIG00000011886) ddx43 (ENSACIG00000012170) KCNQ5 (ENSACIG00000012311) cnrip1b (ENSACIG00000012353) #18 ppp3r1a (ENSACIG00000012385) #19 pno1 (ENSACIG00000012543) #20 dnaaf10 (ENSACIG00000012570) #21 c1d (ENSACIG00000012684) #22 ENSACIG00000012728 #24 meis1b (ENSACIG00000012745) #25 SPRED2 (ENSACIG00000012773) #28 actr2a (ENSACIG00000012799) #29 ENSACIG00000012820 #35 lgalslb (ENSACIG00000012830) #36 ENSACIG00000012854 peli1b (ENSACIG00000012890) ##37 ugp2b (ENSACIG00000012903) MDH1 (ENSACIG00000012929) WDPCP (ENSACIG00000012952) otx1 (ENSACIG00000012995) EHBP1 (ENSACIG00000013008) b3gnt2b (ENSACIG00000013061) ENSACIG00000013066 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT00910000144211 ENSGT00940000162741 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Eupercaria ANCESTRAL SPECIES 15 ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Ballan wrasse MODERN SPECIES 123 nphp1 (ENSLBEG00000007428) ENSLBEG00000007457 malb (ENSLBEG00000007475) mrps5 (ENSLBEG00000007499) slc8a1b (ENSLBEG00000007533) ENSLBEG00000007585 MAP4K3 (ENSLBEG00000007665) slc17a5 (ENSLBEG00000007798) EEF1A1 (ENSLBEG00000007846) ddx43 (ENSLBEG00000007913) KCNQ5 (ENSLBEG00000008083) cnrip1b (ENSLBEG00000008256) #18 ppp3r1a (ENSLBEG00000008282) #19 pno1 (ENSLBEG00000008305) #20 dnaaf10 (ENSLBEG00000008344) #21 c1d (ENSLBEG00000008351) #22 ENSLBEG00000008369 #24 meis1b (ENSLBEG00000008402) #25 SPRED2 (ENSLBEG00000008460) #28 ACTR2 (ENSLBEG00000008499) #29 ENSLBEG00000008542 #35 ENSLBEG00000008560 lgalslb (ENSLBEG00000008580) #36 ENSLBEG00000008607 peli1b (ENSLBEG00000008670) ##37 ugp2b (ENSLBEG00000008705) MDH1 (ENSLBEG00000008750) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000177700 ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Gilthead seabream MODERN SPECIES 6 ENSSAUG00010017079 ENSSAUG00010017082 mrps5 (ENSSAUG00010017084) slc8a1b (ENSSAUG00010017113) ENSSAUG00010018070 MAP4K3 (ENSSAUG00010018108) ENSSAUG00010018537 slc17a5 (ENSSAUG00010018543) EEF1A1 (ENSSAUG00010018560) CGAS (ENSSAUG00010018571) ddx43 (ENSSAUG00010018572) KCNQ5 (ENSSAUG00010018578) cnrip1b (ENSSAUG00010019175) #18 dnaaf10 (ENSSAUG00010019181) #21 pno1 (ENSSAUG00010019182) #20 c1d (ENSSAUG00010019188) #22 ENSSAUG00010019192 #24 meis1b (ENSSAUG00010019201) #25 SPRED2 (ENSSAUG00010019238) #28 ACTR2 (ENSSAUG00010019253) #29 ENSSAUG00010019554 #35 ENSSAUG00010019557 ENSSAUG00010019559 ENSSAUG00010001554 ENSSAUG00010001562 lgalslb (ENSSAUG00010001580) #36 ENSSAUG00010001623 peli1b (ENSSAUG00010001780) ##37 ugp2b (ENSSAUG00010001888) mdh1aa (ENSSAUG00010003388) WDPCP (ENSSAUG00010003517) Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000177700 ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Large yellow croaker MODERN SPECIES 2 ENSLCRG00005004358 ENSLCRG00005004356 fbxo18 (ENSLCRG00005004352) ENSLCRG00005004339 MAP4K3 (ENSLCRG00005004240) ENSLCRG00005004228 slc17a5 (ENSLCRG00005004152) EEF1A1 (ENSLCRG00005004079) ENSLCRG00005004073 ddx43 (ENSLCRG00005004026) KCNQ5 (ENSLCRG00005003543) cnrip1b (ENSLCRG00005003531) #18 ppp3r1a (ENSLCRG00005003511) #19 pno1 (ENSLCRG00005003507) #20 dnaaf10 (ENSLCRG00005003504) #21 c1d (ENSLCRG00005003503) #22 ENSLCRG00005003502 #24 meis1b (ENSLCRG00005000371) #25 SPRED2 (ENSLCRG00005000227) #28 ACTR2 (ENSLCRG00005000189) #29 ENSLCRG00005000165 #35 ENSLCRG00005000141 ENSLCRG00005000106 lgalslb (ENSLCRG00005018532) #36 ENSLCRG00005018527 peli1b (ENSLCRG00005018506) ##37 ENSLCRG00005018039 GFRA1 (ENSLCRG00005018019) ENSLCRG00005018018 si:ch1073-126c3.2 (ENSLCRG00005018017) ENSLCRG00005018016 European seabass MODERN SPECIES 1 malb (ENSDLAG00005033757) mrps5 (ENSDLAG00005009328) ENSDLAG00005029134 ENSDLAG00005009562 slc8a1b (ENSDLAG00005009574) ENSDLAG00005009595 ENSDLAG00005009669 ENSDLAG00005010555 slc17a5 (ENSDLAG00005010580) ddx43 (ENSDLAG00005010835) EEF1A1 (ENSDLAG00005027413) CGAS (ENSDLAG00005010821) KCNQ5 (ENSDLAG00005010946) PPP3R1 (ENSDLAG00005033179) #19 PNO1 (ENSDLAG00005011598) #20 C1D (ENSDLAG00005034609) #22 ENSDLAG00005011679 #24 MEIS1 (ENSDLAG00005011711) #25 SPRED2 (ENSDLAG00005034776) #28 ACTR2 (ENSDLAG00005012437) #29 ENSDLAG00005012508 ENSDLAG00005012530 LGALSL (ENSDLAG00005027623) #36 ENSDLAG00005012591 peli1b (ENSDLAG00005012804) ##37 ugp2b (ENSDLAG00005012869) MDH1 (ENSDLAG00005027998) WDPCP (ENSDLAG00005013917) otx1 (ENSDLAG00005033458) EHBP1 (ENSDLAG00005014039) b3gnt2b (ENSDLAG00005028854) Perciformes ANCESTRAL SPECIES 17 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a.h #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT01030000235205 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Cottioidei ANCESTRAL SPECIES 17 ENSGT00940000154987.i.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.ab #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a.h #28 ENSGT00940000154556.a.b #29 ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q ENSGT00940000177342.a Stickleback MODERN SPECIES 6 vsx1 (ENSGACG00000012138) ENSGACG00000012136 ENSGACG00000012132 ENSGACG00000012134 ENSGACG00000012126 MAP4K3 (ENSGACG00000012107) ENSGACG00000012105 ENSGACG00000012101 ENSGACG00000012095 slc17a5 (ENSGACG00000012086) ddx43 (ENSGACG00000012072) ENSGACG00000012068 cnrip1b (ENSGACG00000012052) #18 pno1 (ENSGACG00000012047) #20 dnaaf10 (ENSGACG00000011988) #21 c1d (ENSGACG00000011981) #22 ENSGACG00000011978 b3gnt2b (ENSGACG00000011971) ENSGACG00000011956 ciao2b (ENSGACG00000011953) ENSGACG00000011946 GPR155 (ENSGACG00000011939) tmem41ab (ENSGACG00000011933) ENSGACG00000011928 ENSGACG00000011926 mtx2 (ENSGACG00000011909) ENSGACG00000011907 ENSGACG00000011902 ENSGACG00000011901 chrna1 (ENSGACG00000011894) cdh11 (ENSGACG00000011843) Lumpfish MODERN SPECIES 6 mrps5 (ENSCLMG00005002398) slc8a1b (ENSCLMG00005002404) ENSCLMG00005002444 ENSCLMG00005002478 slc17a5 (ENSCLMG00005008183) ENSCLMG00005008931 ENSCLMG00005009225 ENSCLMG00005009226 ENSCLMG00005009227 ddx43 (ENSCLMG00005009228) ENSCLMG00005009230 cnrip1b (ENSCLMG00005009450) #18 ENSCLMG00005009451 #19 pno1 (ENSCLMG00005009452) #20 dnaaf10 (ENSCLMG00005009463) #21 c1d (ENSCLMG00005009465) #22 ENSCLMG00005009466 #24 ENSCLMG00005009467 #25 SPRED2 (ENSCLMG00005009468) #28 ACTR2 (ENSCLMG00005009470) #29 ENSCLMG00005009540 ENSCLMG00005009542 lgalslb (ENSCLMG00005009545) #36 ENSCLMG00005009551 peli1b (ENSCLMG00005009602) ##37 ENSCLMG00005009603 ugp2b (ENSCLMG00005009607) MDH1 (ENSCLMG00005009623) ENSCLMG00005009634 otx1 (ENSCLMG00005009635) EHBP1 (ENSCLMG00005009639) Perciformes_a ANCESTRAL SPECIES 16 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT01030000235154 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a.h #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT01030000235205 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Pike perch MODERN SPECIES 30 ENSSLUG00000010750 malb (ENSSLUG00000010745) mrps5 (ENSSLUG00000010736) slc8a1b (ENSSLUG00000010691) ENSSLUG00000010676 MAP4K3 (ENSSLUG00000009726) slc17a5 (ENSSLUG00000008576) eef1a1b (ENSSLUG00000008428) CGAS (ENSSLUG00000008418) ddx43 (ENSSLUG00000008401) KCNQ5 (ENSSLUG00000008175) cnrip1b (ENSSLUG00000008160) #18 sult6b1 (ENSSLUG00000008118) pno1 (ENSSLUG00000008114) #20 dnaaf10 (ENSSLUG00000008055) #21 c1d (ENSSLUG00000008045) #22 ENSSLUG00000008032 meis1b (ENSSLUG00000007585) #25 SPRED2 (ENSSLUG00000007558) #28 ACTR2 (ENSSLUG00000007306) #29 ENSSLUG00000007287 #35 ENSSLUG00000007277 ENSSLUG00000007269 ENSSLUG00000007265 ENSSLUG00000007259 lgalslb (ENSSLUG00000007241) #36 ENSSLUG00000007184 peli1b (ENSSLUG00000007153) ##37 ugp2b (ENSSLUG00000005472) mdh1aa (ENSSLUG00000018360) WDPCP (ENSSLUG00000018353) Channel bull blenny MODERN SPECIES 6 malb (ENSCGOG00000008750) mrps5 (ENSCGOG00000008752) slc8a1b (ENSCGOG00000008760) ENSCGOG00000008776 MAP4K3 (ENSCGOG00000008956) ENSCGOG00000013110 slc17a5 (ENSCGOG00000013126) EEF1A1 (ENSCGOG00000013428) CGAS (ENSCGOG00000014721) ddx43 (ENSCGOG00000014781) KCNQ5 (ENSCGOG00000014877) cnrip1b (ENSCGOG00000014921) #18 ppp3r1a (ENSCGOG00000014926) #19 pno1 (ENSCGOG00000014929) #20 dnaaf10 (ENSCGOG00000014955) #21 c1d (ENSCGOG00000014962) #22 meis1b (ENSCGOG00000014989) #25 SPRED2 (ENSCGOG00000017236) #28 ACTR2 (ENSCGOG00000017247) #29 ENSCGOG00000017511 #35 ENSCGOG00000017515 ENSCGOG00000017517 ENSCGOG00000017519 lgalslb (ENSCGOG00000017523) #36 ENSCGOG00000017525 peli1b (ENSCGOG00000017558) ##37 ENSCGOG00000017565 MDH1 (ENSCGOG00000017586) WDPCP (ENSCGOG00000018045) otx1 (ENSCGOG00000018063) EHBP1 (ENSCGOG00000018066) Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00950000183091.A.b #21 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Fugu MODERN SPECIES 16 zgc:65997 (ENSTRUG00000032567) nphp1 (ENSTRUG00000026367) ENSTRUG00000026056 malb (ENSTRUG00000031016) mrps5 (ENSTRUG00000030917) slc8a1b (ENSTRUG00000013345) MAP4K3 (ENSTRUG00000013107) ENSTRUG00000026938 slc17a5 (ENSTRUG00000013027) eef1a1b (ENSTRUG00000012893) ddx43 (ENSTRUG00000012795) KCNQ5 (ENSTRUG00000012601) cnrip1b (ENSTRUG00000012558) #18 dnaaf10 (ENSTRUG00000012303) #21 pno1 (ENSTRUG00000012470) #20 c1d (ENSTRUG00000012245) #22 ENSTRUG00000022857 #24 meis1b (ENSTRUG00000011993) #25 SPRED2 (ENSTRUG00000011904) #28 actr2a (ENSTRUG00000011717) #29 ENSTRUG00000011707 ENSTRUG00000021877 lgalslb (ENSTRUG00000011696) #36 ENSTRUG00000019803 peli1b (ENSTRUG00000011542) ##37 ugp2b (ENSTRUG00000020420) MDH1 (ENSTRUG00000025836) WDPCP (ENSTRUG00000011105) otx1 (ENSTRUG00000011049) EHBP1 (ENSTRUG00000011025) b3gnt2b (ENSTRUG00000010977) Tetraodon MODERN SPECIES 9 zgc:65997 (ENSTNIG00000007445) nphp1 (ENSTNIG00000007444) ENSTNIG00000007443 ENSTNIG00000009889 slc8a1b (ENSTNIG00000009816) ENSTNIG00000009817 MAP4K3 (ENSTNIG00000009818) ENSTNIG00000009819 slc17a5 (ENSTNIG00000009820) eef1a1b (ENSTNIG00000009821) ddx43 (ENSTNIG00000009822) KCNQ5 (ENSTNIG00000009823) ppp3r1a (ENSTNIG00000009824) #19 pno1 (ENSTNIG00000009825) #20 dnaaf10 (ENSTNIG00000009826) #21 c1d (ENSTNIG00000009827) #22 meis1b (ENSTNIG00000009828) #25 SPRED2 (ENSTNIG00000009829) #28 actr2a (ENSTNIG00000009830) #29 ENSTNIG00000009831 lgalslb (ENSTNIG00000009832) #36 ENSTNIG00000009833 peli1b (ENSTNIG00000009834) ##37 ugp2b (ENSTNIG00000009837) peli1b (ENSTNIG00000009836) ##37 ugp2b (ENSTNIG00000009835) MDH1 (ENSTNIG00000009838) WDPCP (ENSTNIG00000009839) otx1 (ENSTNIG00000009840) EHBP1 (ENSTNIG00000009841) ENSTNIG00000009842 Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Carangaria ANCESTRAL SPECIES 19 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.c.a ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000166594 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Pleuronectoidei ANCESTRAL SPECIES 60 ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00950000183029.B.j.c.a ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000166594 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Turbot MODERN SPECIES 6 ENSSMAG00000019652 malb (ENSSMAG00000022037) mrps5 (ENSSMAG00000019624) slc8a1b (ENSSMAG00000019611) ENSSMAG00000019604 ENSSMAG00000019378 ENSSMAG00000030081 slc17a5 (ENSSMAG00000019352) EEF1A1 (ENSSMAG00000019345) CGAS (ENSSMAG00000019315) ddx43 (ENSSMAG00000019288) KCNQ5 (ENSSMAG00000019274) cnrip1b (ENSSMAG00000019273) #18 pno1 (ENSSMAG00000019252) #20 dnaaf10 (ENSSMAG00000019245) #21 C1D (ENSSMAG00000036865) #22 ENSSMAG00000019217 #24 MEIS1 (ENSSMAG00000019196) #25 SPRED2 (ENSSMAG00000019178) #28 actr2b (ENSSMAG00000019164) #29 ENSSMAG00000032537 #35 ctu2 (ENSSMAG00000019141) PIEZO1 (ENSSMAG00000019053) CDT1 (ENSSMAG00000019002) aprt (ENSSMAG00000018985) ENSSMAG00000018949 ENSSMAG00000018945 nvl (ENSSMAG00000018904) degs1 (ENSSMAG00000018894) fbxo28 (ENSSMAG00000018869) ENSSMAG00000018865 Tongue sole MODERN SPECIES 3 nphp1 (ENSCSEG00000000462) MAL (ENSCSEG00000000488) ENSCSEG00000000491 mrps5 (ENSCSEG00000000495) slc8a1b (ENSCSEG00000000505) ENSCSEG00000000512 MAP4K3 (ENSCSEG00000000516) cnrip1b (ENSCSEG00000000521) #18 KCNQ5 (ENSCSEG00000000525) ddx43 (ENSCSEG00000000532) eef1a1b (ENSCSEG00000000544) slc17a5 (ENSCSEG00000000550) ppp3r1a (ENSCSEG00000000556) #19 pno1 (ENSCSEG00000000565) #20 dnaaf10 (ENSCSEG00000000577) #21 c1d (ENSCSEG00000000587) #22 ENSCSEG00000000595 #24 ENSCSEG00000000598 ENSCSEG00000000604 mcfd2 (ENSCSEG00000000605) TTC7A (ENSCSEG00000000610) si:ch211-93n23.7 (ENSCSEG00000000630) calm2a (ENSCSEG00000000634) ENSCSEG00000000644 ENSCSEG00000000657 ENSCSEG00000000663 PLEKHH2 (ENSCSEG00000000676) epcam (ENSCSEG00000000708) THADA (ENSCSEG00000000718) ENSCSEG00000000734 zfp36l2 (ENSCSEG00000000741) Carangaria_A ANCESTRAL SPECIES 25 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000166594 ENSGT01030000235205 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Seriola ANCESTRAL SPECIES 17 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT01100000263491.a.a.c.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Greater amberjack MODERN SPECIES 72 malb (ENSSDUG00000019726) mrps5 (ENSSDUG00000019792) slc8a1b (ENSSDUG00000019868) ENSSDUG00000019898 MAP4K3 (ENSSDUG00000019925) slc17a5 (ENSSDUG00000020030) EEF1A1 (ENSSDUG00000020050) ENSSDUG00000020072 CGAS (ENSSDUG00000020107) ddx43 (ENSSDUG00000020120) KCNQ5 (ENSSDUG00000020143) cnrip1b (ENSSDUG00000020172) #18 ppp3r1a (ENSSDUG00000020180) #19 pno1 (ENSSDUG00000020189) #20 dnaaf10 (ENSSDUG00000020203) #21 c1d (ENSSDUG00000020213) #22 ENSSDUG00000020231 #24 meis1b (ENSSDUG00000020244) #25 SPRED2 (ENSSDUG00000020295) #28 ACTR2 (ENSSDUG00000020311) #29 ENSSDUG00000020338 #35 ENSSDUG00000020354 ENSSDUG00000020365 ENSSDUG00000020372 lgalslb (ENSSDUG00000020375) #36 ENSSDUG00000020392 ENSSDUG00000020421 ##37 ugp2b (ENSSDUG00000020436) ENSSDUG00000020458 mdh1aa (ENSSDUG00000020483) WDPCP (ENSSDUG00000020512) Yellowtail amberjack MODERN SPECIES 2948 nphp1 (ENSSLDG00000016665) ENSSLDG00000016695 malb (ENSSLDG00000016707) mrps5 (ENSSLDG00000016726) slc8a1b (ENSSLDG00000016760) ENSSLDG00000016788 MAP4K3 (ENSSLDG00000016855) slc17a5 (ENSSLDG00000017146) EEF1A1 (ENSSLDG00000017189) ddx43 (ENSSLDG00000017225) KCNQ5 (ENSSLDG00000017263) cnrip1b (ENSSLDG00000017291) #18 ppp3r1a (ENSSLDG00000017313) #19 pno1 (ENSSLDG00000017330) #20 dnaaf10 (ENSSLDG00000017358) #21 c1d (ENSSLDG00000017371) #22 ENSSLDG00000017390 #24 meis1b (ENSSLDG00000017406) #25 SPRED2 (ENSSLDG00000017425) #28 ACTR2 (ENSSLDG00000017448) #29 ENSSLDG00000017479 #35 ENSSLDG00000017491 ENSSLDG00000017510 lgalslb (ENSSLDG00000017531) #36 ENSSLDG00000017547 peli1b (ENSSLDG00000017579) ##37 ugp2b (ENSSLDG00000017597) ENSSLDG00000017626 ENSSLDG00000017640 mdh1aa (ENSSLDG00000017660) WDPCP (ENSSLDG00000017711) Barramundi perch MODERN SPECIES 33 slc8a1b (ENSLCAG00010014445) ENSLCAG00010014439 MAP4K3 (ENSLCAG00010014415) ENSLCAG00010014405 slc17a5 (ENSLCAG00010014365) EEF1A1 (ENSLCAG00010014256) ENSLCAG00010014227 ddx43 (ENSLCAG00010014225) KCNQ5 (ENSLCAG00010014113) cnrip1b (ENSLCAG00010014096) #18 ppp3r1a (ENSLCAG00010014087) #19 pno1 (ENSLCAG00010014077) #20 dnaaf10 (ENSLCAG00010014068) #21 c1d (ENSLCAG00010014064) #22 ENSLCAG00010014062 meis1b (ENSLCAG00010013649) #25 SPRED2 (ENSLCAG00010013603) #28 ACTR2 (ENSLCAG00010013559) #29 ENSLCAG00010013537 #35 ENSLCAG00010013530 ENSLCAG00010013527 lgalslb (ENSLCAG00010013522) #36 ENSLCAG00010013511 peli1b (ENSLCAG00010013496) ##37 ugp2b (ENSLCAG00010013444) mdh1aa (ENSLCAG00010013412) WDPCP (ENSLCAG00010013399) otx1 (ENSLCAG00010013390) EHBP1 (ENSLCAG00010013383) Anabantaria ANCESTRAL SPECIES 17 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Anabantoidei ANCESTRAL SPECIES 17 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000154186.a.q #35 ENSGT00940000177700 ENSGT00940000155337.ab #36 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Climbing perch MODERN SPECIES 6 malb (ENSATEG00000012241) mrps5 (ENSATEG00000012264) slc8a1b (ENSATEG00000012293) ENSATEG00000028108 ENSATEG00000027204 ENSATEG00000012370 ENSATEG00000012559 slc17a5 (ENSATEG00000012575) EEF1A1 (ENSATEG00000012623) CGAS (ENSATEG00000012654) ddx43 (ENSATEG00000012664) KCNQ5 (ENSATEG00000012797) ENSATEG00000027106 #18 DNAAF10 (ENSATEG00000012915) #21 pno1 (ENSATEG00000012887) #20 C1D (ENSATEG00000012922) #22 ENSATEG00000012939 #24 MEIS1 (ENSATEG00000012952) #25 SPRED2 (ENSATEG00000013004) #28 ACTR2 (ENSATEG00000013034) #29 ENSATEG00000028886 #35 ENSATEG00000013084 LGALSL (ENSATEG00000027905) #36 ENSATEG00000013162 peli1b (ENSATEG00000013249) ##37 ugp2b (ENSATEG00000013298) MDH1 (ENSATEG00000013346) WDPCP (ENSATEG00000013390) otx1 (ENSATEG00000013437) EHBP1 (ENSATEG00000013475) b3gnt2b (ENSATEG00000013573) Siamese fighting fish MODERN SPECIES 6 mrps5 (ENSBSLG00000013218) slc8a1b (ENSBSLG00000013391) ENSBSLG00000014213 MAP4K3 (ENSBSLG00000014437) ENSBSLG00000015485 slc17a5 (ENSBSLG00000015518) ddx43 (ENSBSLG00000015799) EEF1A1 (ENSBSLG00000015871) ENSBSLG00000015916 ENSBSLG00000016785 cnrip1b (ENSBSLG00000017289) #18 ENSBSLG00000017307 ppp3r1a (ENSBSLG00000017314) #19 pno1 (ENSBSLG00000017358) #20 dnaaf10 (ENSBSLG00000017449) #21 c1d (ENSBSLG00000017549) #22 ENSBSLG00000017560 #24 meis1b (ENSBSLG00000017627) #25 SPRED2 (ENSBSLG00000018342) #28 actr2a (ENSBSLG00000018376) #29 ENSBSLG00000018593 #35 lgalslb (ENSBSLG00000018607) #36 ENSBSLG00000018627 peli1b (ENSBSLG00000018653) ##37 ugp2b (ENSBSLG00000018667) MDH1 (ENSBSLG00000019042) WDPCP (ENSBSLG00000019147) otx1 (ENSBSLG00000019164) EHBP1 (ENSBSLG00000019193) b3gnt2b (ENSBSLG00000019315) ENSBSLG00000019316 Zig-zag eel MODERN SPECIES 6 nphp1 (ENSMAMG00000022063) ENSMAMG00000022068 malb (ENSMAMG00000022072) mrps5 (ENSMAMG00000022074) slc8a1b (ENSMAMG00000022080) ENSMAMG00000022090 ENSMAMG00000022108 slc17a5 (ENSMAMG00000022121) EEF1A1 (ENSMAMG00000004552) CGAS (ENSMAMG00000022124) ddx43 (ENSMAMG00000022128) KCNQ5 (ENSMAMG00000022134) ENSMAMG00000022136 #18 DNAAF10 (ENSMAMG00000022141) #21 pno1 (ENSMAMG00000022144) #20 C1D (ENSMAMG00000022156) #22 ENSMAMG00000022164 #24 MEIS1 (ENSMAMG00000022171) #25 SPRED2 (ENSMAMG00000025530) #28 actr2b (ENSMAMG00000022188) #29 AFTPH (ENSMAMG00000022192) #35 LGALSL (ENSMAMG00000022198) #36 ENSMAMG00000022200 peli1b (ENSMAMG00000022208) ##37 ugp2b (ENSMAMG00000022214) MDH1 (ENSMAMG00000022218) WDPCP (ENSMAMG00000022221) otx1 (ENSMAMG00000022224) EHBP1 (ENSMAMG00000022226) b3gnt2b (ENSMAMG00000022230) ENSMAMG00000022263 Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 363 ugp2b (ENSHCOG00000015044) mdh1aa (ENSHCOG00000015008) WDPCP (ENSHCOG00000000697) otx1 (ENSHCOG00000014924) EHBP1 (ENSHCOG00000014911) b3gnt2b (ENSHCOG00000014754) slc17a5 (ENSHCOG00000014744) eef1a1b (ENSHCOG00000014718) ddx43 (ENSHCOG00000014704) KCNQ5 (ENSHCOG00000014664) cnrip1b (ENSHCOG00000000405) #18 ENSHCOG00000014627 #19 pno1 (ENSHCOG00000014618) #20 dnaaf10 (ENSHCOG00000014596) #21 c1d (ENSHCOG00000014589) #22 c1d (ENSHCOG00000014568) #22 meis1b (ENSHCOG00000014553) #25 SPRED2 (ENSHCOG00000014521) #28 actr2a (ENSHCOG00000014491) #29 SLC16A12 (ENSHCOG00000014460) pank1a (ENSHCOG00000014434) zgc:65997 (ENSHCOG00000014407) nphp1 (ENSHCOG00000014383) ENSHCOG00000014212 malb (ENSHCOG00000014207) mrps5 (ENSHCOG00000014200) slc8a1b (ENSHCOG00000014155) ENSHCOG00000014128 Tiger tail seahorse MODERN SPECIES 363 peli1b (ENSHCOG00000015073) ##37 ugp2b (ENSHCOG00000015044) mdh1aa (ENSHCOG00000015008) WDPCP (ENSHCOG00000000697) otx1 (ENSHCOG00000014924) EHBP1 (ENSHCOG00000014911) b3gnt2b (ENSHCOG00000014754) slc17a5 (ENSHCOG00000014744) eef1a1b (ENSHCOG00000014718) ddx43 (ENSHCOG00000014704) KCNQ5 (ENSHCOG00000014664) cnrip1b (ENSHCOG00000000405) #18 ENSHCOG00000014627 #19 pno1 (ENSHCOG00000014618) #20 dnaaf10 (ENSHCOG00000014596) #21 c1d (ENSHCOG00000014589) #22 c1d (ENSHCOG00000014568) #22 meis1b (ENSHCOG00000014553) #25 SPRED2 (ENSHCOG00000014521) #28 actr2a (ENSHCOG00000014491) #29 SLC16A12 (ENSHCOG00000014460) pank1a (ENSHCOG00000014434) zgc:65997 (ENSHCOG00000014407) nphp1 (ENSHCOG00000014383) ENSHCOG00000014212 malb (ENSHCOG00000014207) mrps5 (ENSHCOG00000014200) slc8a1b (ENSHCOG00000014155) ENSHCOG00000014128 Pinecone sodierfish MODERN SPECIES 6 ppm1ba (ENSMMDG00005008805) SLC3A1 (ENSMMDG00005008796) prepl (ENSMMDG00005008758) CAMKMT (ENSMMDG00005008750) six3a (ENSMMDG00005008748) six2a (ENSMMDG00005008747) SRBD1 (ENSMMDG00005007351) slc17a5 (ENSMMDG00005006581) EEF1A1 (ENSMMDG00005006490) CGAS (ENSMMDG00005006487) ddx43 (ENSMMDG00005006480) KCNQ5 (ENSMMDG00005005265) cnrip1b (ENSMMDG00005005245) #18 pno1 (ENSMMDG00005005242) #20 dnaaf10 (ENSMMDG00005005183) #21 c1d (ENSMMDG00005005173) #22 ENSMMDG00005005164 #24 meis1b (ENSMMDG00005005050) #25 SPRED2 (ENSMMDG00005005012) #28 ACTR2 (ENSMMDG00005004705) #29 ENSMMDG00005004671 #35 ENSMMDG00005004660 lgalslb (ENSMMDG00005004651) #36 ENSMMDG00005004598 peli1b (ENSMMDG00005004574) ##37 ugp2b (ENSMMDG00005002214) MDH1 (ENSMMDG00005002128) WDPCP (ENSMMDG00005002107) otx1 (ENSMMDG00005002103) ENSMMDG00005002101 EHBP1 (ENSMMDG00005002064) Cod MODERN SPECIES 6 ENSGMOG00000032898 ENSGMOG00000016152 KCNG3 (ENSGMOG00000036198) COX7A2L (ENSGMOG00000010003) ENSGMOG00000029774 EML4 (ENSGMOG00000009981) pkdcca (ENSGMOG00000002754) prph2b (ENSGMOG00000002745) ENSGMOG00000031532 ENSGMOG00000000833 ACSS1 (ENSGMOG00000017472) ENSGMOG00000034012 ENTPD6 (ENSGMOG00000002346) DNAAF10 (ENSGMOG00000026435) #21 PNO1 (ENSGMOG00000001448) #20 C1D (ENSGMOG00000013911) #22 ENSGMOG00000025603 #24 SPRED2 (ENSGMOG00000032899) #28 ENSGMOG00000006487 ENSGMOG00000020233 ENSGMOG00000006493 ENSGMOG00000006569 ENSGMOG00000006578 ENSGMOG00000006605 ZFAND4 (ENSGMOG00000006650) marchf8 (ENSGMOG00000006671) alox5a (ENSGMOG00000006677) ENSGMOG00000029870 eif4e1c (ENSGMOG00000006731) si:dkey-228d14.5 (ENSGMOG00000006744) zgc:110319 (ENSGMOG00000015309) Protacanthopterygii ANCESTRAL SPECIES 4 ENSGT00390000009877 ENSGT00940000156543 ENSGT00940000157912 ENSGT00390000002164.a ENSGT00390000018525.a.a ENSGT00940000155989.e ENSGT01010000222287.B.a.a.a.a.a.a ENSGT00940000165449 ENSGT00940000157373.l ENSGT00390000007551 ENSGT00940000154445.a ENSGT00390000004284.e #18 ENSGT00940000156530.c.ab #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000157509.a.f ENSGT00940000156327.l.o #25 ENSGT00940000156841.a.a #28 ENSGT00940000154556.a.b #29 ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.s.a.b ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234.c ENSGT00390000016551 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 325 ENSGT00950000185438 ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449 ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000004284.e.e #18 ENSGT00940000156530.c.ab.a #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.pb #22 ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT00940000164900 ENSGT00940000169412 ENSGT00940000165096.b.b.f ENSGT00940000156922.b.a.f ENSGT00940000164958.a.d.a Salmoninae_a ANCESTRAL SPECIES 17 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000002164.a.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00950000183091.A.b #21 ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e #18 ENSGT00940000156530.c.ab.a #19 ENSGT00390000018052 #20 ENSGT00390000015405.pb #22 ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g ENSGT00940000158127.h ENSGT00940000166074.B Salmo ANCESTRAL SPECIES 3 ENSGT00940000157851 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000002164.a.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e #18 ENSGT00950000183091.A.b #21 ENSGT00390000018052 #20 ENSGT00390000015405.pb #22 ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g ENSGT00940000158127.h ENSGT00940000166074.B Atlantic salmon MODERN SPECIES 10 ENSSSAG00000087765 pde10a (ENSSSAG00000118189) ENSSSAG00000086110 ENSSSAG00000040706 sft2d1 (ENSSSAG00000054276) ENSSSAG00000078645 ENSSSAG00000085294 zgc:65997 (ENSSSAG00000054288) pank1a (ENSSSAG00000054291) cisd1 (ENSSSAG00000054306) ENSSSAG00000102484 ENSSSAG00000089836 ENSSSAG00000121949 #18 ENSSSAG00000054332 #21 pno1 (ENSSSAG00000054375) #20 ENSSSAG00000054384 #22 CDHR1 (ENSSSAG00000054429) ENSSSAG00000092867 LRIT1 (ENSSSAG00000105330) rgrb (ENSSSAG00000120288) ENSSSAG00000092692 ENSSSAG00000055677 ENSSSAG00000109391 bsk146 (ENSSSAG00000054264) ENSSSAG00000054256 ENSSSAG00000089767 ENSSSAG00000075269 dhrs7cb (ENSSSAG00000076079) ENSSSAG00000118228 hs3st3l (ENSSSAG00000103425) ENSSSAG00000076092 River trout MODERN SPECIES 11 ENSSTUG00000000673 ENSSTUG00000000681 pde10a (ENSSTUG00000000703) PRR18 (ENSSTUG00000000898) sft2d1 (ENSSTUG00000000902) ENSSTUG00000000931 ENSSTUG00000001018 zgc:65997 (ENSSTUG00000001022) pank1a (ENSSTUG00000001033) ENSSTUG00000001057 cisd1 (ENSSTUG00000001060) ADK (ENSSTUG00000001067) cnrip1b (ENSSTUG00000001070) #18 dnaaf10 (ENSSTUG00000001082) #21 pno1 (ENSSTUG00000001113) #20 c1d (ENSSTUG00000001125) #22 CDHR1 (ENSSTUG00000001153) LRIT2 (ENSSTUG00000001300) lrit1b (ENSSTUG00000001310) rgrb (ENSSTUG00000001319) TOB1 (ENSSTUG00000001327) ENSSTUG00000001439 bsk146 (ENSSTUG00000002676) ENSSTUG00000002686 ENSSTUG00000002722 dhrs7cb (ENSSTUG00000003034) ENSSTUG00000003094 hs3st3l (ENSSTUG00000003108) ENSSTUG00000003120 ENSSTUG00000003137 rcvrnb (ENSSTUG00000003172) Oncorhynchus ANCESTRAL SPECIES 26 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000002164.a.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e #18 ENSGT00940000156530.c.ab.a #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.pb #22 ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g ENSGT00940000158127.h ENSGT00940000166074.B Rainbow trout MODERN SPECIES 7 pla2g12b (ENSOMYG00000008035) ENSOMYG00000050336 pde10a (ENSOMYG00000056489) PRR18 (ENSOMYG00000071091) sft2d1 (ENSOMYG00000051704) ENSOMYG00000062569 ENSOMYG00000012149 ENSOMYG00000012162 pank1a (ENSOMYG00000012168) ENSOMYG00000012181 ENSOMYG00000053632 ENSOMYG00000061758 ENSOMYG00000055933 #18 ENSOMYG00000012215 #21 pno1 (ENSOMYG00000012229) #20 ENSOMYG00000012244 #22 CDHR1 (ENSOMYG00000012281) ENSOMYG00000060629 ENSOMYG00000012346 LRIT1 (ENSOMYG00000012359) rgrb (ENSOMYG00000012374) ENSOMYG00000055609 ENSOMYG00000012389 ENSOMYG00000012779 bsk146 (ENSOMYG00000018128) ENSOMYG00000048354 ENSOMYG00000018149 ENSOMYG00000018154 ENSOMYG00000018233 hs3st3l (ENSOMYG00000018249) ENSOMYG00000052124 Oncorhynchus_a ANCESTRAL SPECIES 21 ENSGT00940000157851 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e #18 ENSGT00940000156530.c.ab.a #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405.pb #22 ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g ENSGT00940000158127.h ENSGT00940000166074.B Coho salmon MODERN SPECIES 12 ENSOKIG00005037986 ENSOKIG00005038008 mcu (ENSOKIG00005038018) OIT3 (ENSOKIG00005038042) pla2g12b (ENSOKIG00005038363) ENSOKIG00005038572 pde10a (ENSOKIG00005038689) SFT2D1 (ENSOKIG00005041539) ENSOKIG00005041578 ENSOKIG00005041651 zgc:65997 (ENSOKIG00005041663) pank1a (ENSOKIG00005041703) CISD1 (ENSOKIG00005041739) dnaaf10 (ENSOKIG00005041789) #21 pno1 (ENSOKIG00005041885) #20 c1d (ENSOKIG00005041926) #22 CDHR1 (ENSOKIG00005041956) LRIT2 (ENSOKIG00005042253) lrit1b (ENSOKIG00005042272) rgrb (ENSOKIG00005042295) TOB1 (ENSOKIG00005042337) ENSOKIG00005042455 ENSOKIG00005043401 bsk146 (ENSOKIG00005043410) ENSOKIG00005043443 ENSOKIG00005043702 ENSOKIG00005045983 hs3st3l (ENSOKIG00005045998) ENSOKIG00005046003 ENSOKIG00005046008 rcvrnb (ENSOKIG00005005958) Chinook salmon MODERN SPECIES 16 ENSOTSG00005004721 mrps6 (ENSOTSG00005004723) SLC29A1 (ENSOTSG00005004734) psap (ENSOTSG00005004901) ENSOTSG00005004951 ly6pge (ENSOTSG00005004954) ENSOTSG00005004957 zgc:65997 (ENSOTSG00005004959) pank1a (ENSOTSG00005004960) ENSOTSG00005004961 ENSOTSG00005004962 CNRIP1 (ENSOTSG00005004964) #18 ENSOTSG00005004965 #19 PNO1 (ENSOTSG00005004967) #20 dnaaf10 (ENSOTSG00005004969) #21 c1d (ENSOTSG00005004971) #22 bsk146 (ENSOTSG00005004984) ENSOTSG00005004986 ENSOTSG00005004991 dhrs7cb (ENSOTSG00005005003) ENSOTSG00005005008 hs3st3l (ENSOTSG00005005009) ENSOTSG00005005012 ENSOTSG00005005014 rcvrnb (ENSOTSG00005005015) gas7a (ENSOTSG00005005018) ENSOTSG00005005199 map2k4b (ENSOTSG00005005203) ENSOTSG00005007103 ENSOTSG00005007105 ENSOTSG00005007107 Huchen MODERN SPECIES 1311 ENSHHUG00000052387 ENSHHUG00000052378 ENSHHUG00000052376 zgc:65997 (ENSHHUG00000052374) pank1a (ENSHHUG00000052369) cisd1 (ENSHHUG00000052367) cnrip1b (ENSHHUG00000052366) #18 ENSHHUG00000052353 #19 pno1 (ENSHHUG00000052351) #20 dnaaf10 (ENSHHUG00000052347) #21 c1d (ENSHHUG00000052344) #22 ENSHHUG00000052340 LRIT2 (ENSHHUG00000052339) lrit1b (ENSHHUG00000052338) rgrb (ENSHHUG00000052335) tob1b (ENSHHUG00000052334) Salmoninae ANCESTRAL SPECIES ENSGT00390000015405.qb #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000015405.qb #22 Salmo ANCESTRAL SPECIES ENSGT00390000015405.qb #22 Atlantic salmon MODERN SPECIES 20 mcu (ENSSSAG00000011497) ENSSSAG00000096165 ENSSSAG00000089712 ENSSSAG00000111190 pde10a (ENSSSAG00000078742) ENSSSAG00000108028 sft2a (ENSSSAG00000078682) ENSSSAG00000054281 ENSSSAG00000117112 pank1a (ENSSSAG00000120413) ENSSSAG00000078607 ENSSSAG00000119980 #18 ENSSSAG00000053545 #19 ENSSSAG00000100224 ENSSSAG00000105133 ENSSSAG00000040697 #22 ENSSSAG00000040663 CDHR1 (ENSSSAG00000078583) ENSSSAG00000078579 lrit1b (ENSSSAG00000055242) rgrb (ENSSSAG00000078574) slc18a3b (ENSSSAG00000099206) ENSSSAG00000078551 ENSSSAG00000078194 ENSSSAG00000064911 ENSSSAG00000116625 ENSSSAG00000082301 ENSSSAG00000117960 ENSSSAG00000115184 ENSSSAG00000117251 ENSSSAG00000088705 River trout MODERN SPECIES 1 ENSSTUG00000049637 ENSSTUG00000049631 pde10a (ENSSTUG00000049366) TBXT (ENSSTUG00000049327) ENSSTUG00000049326 PRR18 (ENSSTUG00000049323) sft2d1 (ENSSTUG00000049313) ENSSTUG00000049296 ENSSTUG00000049293 pank1a (ENSSTUG00000049284) MTLN (ENSSTUG00000049282) cisd1 (ENSSTUG00000049276) ENSSTUG00000049272 #18 ENSSTUG00000049270 ENSSTUG00000049256 #19 c1d (ENSSTUG00000049247) #22 CDHR1 (ENSSTUG00000049152) LRIT2 (ENSSTUG00000049136) lrit1b (ENSSTUG00000049133) rgrb (ENSSTUG00000049130) slc18a3b (ENSSTUG00000049127) CHAT (ENSSTUG00000048884) ENSSTUG00000048854 ENSSTUG00000048848 ENSSTUG00000048819 flrt3 (ENSSTUG00000048815) ENSSTUG00000048809 ENSSTUG00000048805 ENSSTUG00000048791 EPHX1 (ENSSTUG00000048657) ENSSTUG00000048648 Northern pike MODERN SPECIES 4 pla2g12b (ENSELUG00000015559) ENSELUG00000015550 pde10a (ENSELUG00000015533) TBXT (ENSELUG00000015495) PRR18 (ENSELUG00000015440) sft2d1 (ENSELUG00000015430) ENSELUG00000015384 ENSELUG00000015297 zgc:65997 (ENSELUG00000015263) pank1a (ENSELUG00000015238) ENSELUG00000015188 cisd1 (ENSELUG00000015140) cnrip1b (ENSELUG00000015120) #18 dnaaf10 (ENSELUG00000015074) #21 pno1 (ENSELUG00000014887) #20 C1D (ENSELUG00000014823) #22 ENSELUG00000014800 #24 ENSELUG00000014766 ENSELUG00000014739 #25 ENSELUG00000031773 SPRED2 (ENSELUG00000014634) #28 ACTR2 (ENSELUG00000014576) #29 papolg (ENSELUG00000014497) ENSELUG00000014470 ENSELUG00000001419 rel (ENSELUG00000014377) pex13 (ENSELUG00000014334) SANBR (ENSELUG00000014318) XPO1 (ENSELUG00000014306) b3gnt2b (ENSELUG00000014198) EHBP1 (ENSELUG00000014117) Otomorpha ANCESTRAL SPECIES 10 ENSGT00940000157560.d.b ENSGT00940000157837.c ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 #17 ENSGT00390000004284.e #18 ENSGT00940000156530.c.`b.b #19 ENSGT00390000018052 #20 ENSGT00950000183091.A.b #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.b #28 ENSGT00940000154556.c.b #29 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b.b #33 ENSGT00940000155337.ab #36 ENSGT00940000177700 ENSGT00940000154186.a.q #35 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.r ENSGT00390000016551 Clupeiformes ANCESTRAL SPECIES 8 ENSGT00940000157560.d.b ENSGT00940000157837.c ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 #17 ENSGT00390000004284.e #18 ENSGT00950000183091.A.b.m #21 ENSGT00390000018052 #20 ENSGT00950000183091.A.b.n #21 ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156327.l #25 ENSGT00940000156841.b #28 ENSGT00940000154556.c.b #29 ENSGT00810000125473.A #31 ENSGT00940000157081 #32 ENSGT00530000063867.b.b #33 ENSGT00940000155337.ab #36 ENSGT00940000154186.a.q #35 ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ##37 ENSGT00940000153464.B.z.b ENSGT00530000063410.a.r ENSGT00390000016551 ENSGT00940000161234 Atlantic herring MODERN SPECIES 4 ENSCHAG00000016699 ENSCHAG00000016704 ENSCHAG00000016725 dntt (ENSCHAG00000016742) ENSCHAG00000017244 ENSCHAG00000017260 vox (ENSCHAG00000017267) ENSCHAG00000017282 ENSCHAG00000017294 plek (ENSCHAG00000017624) #17 ENSCHAG00000017647 meis1b (ENSCHAG00000017672) #25 spred2b (ENSCHAG00000018338) #28 pno1 (ENSCHAG00000018350) #20 dnaaf10 (ENSCHAG00000018360) #21 c1d (ENSCHAG00000018513) #22 slc1a4 (ENSCHAG00000018548) #32 sertad2b (ENSCHAG00000018647) #33 lgalslb (ENSCHAG00000018658) #36 ENSCHAG00000018678 #35 ENSCHAG00000018667 ENSCHAG00000018691 peli1b (ENSCHAG00000018837) ##37 ugp2b (ENSCHAG00000018928) ENSCHAG00000019202 ENSCHAG00000000462 mdh1ab (ENSCHAG00000000940) WDPCP (ENSCHAG00000001434) otx1 (ENSCHAG00000001784) EHBP1 (ENSCHAG00000001812) b3gnt2b (ENSCHAG00000002172) Denticle herring MODERN SPECIES 18 PDE6C (ENSDCDG00000031596) lgi1a (ENSDCDG00000031706) MARK1 (ENSDCDG00000031753) EFEMP1 (ENSDCDG00000032296) XPO5 (ENSDCDG00000032338) tp53bp2a (ENSDCDG00000032387) polh (ENSDCDG00000032677) GTPBP2 (ENSDCDG00000032682) OTOR (ENSDCDG00000032687) pcsk2 (ENSDCDG00000032695) BFSP1 (ENSDCDG00000032709) prokr1b (ENSDCDG00000032711) plek (ENSDCDG00000032714) #17 cnrip1b (ENSDCDG00000032715) #18 dnaaf10 (ENSDCDG00000032721) #21 c1d (ENSDCDG00000032727) #22 ENSDCDG00000032730 #24 meis1a (ENSDCDG00000032751) #25 spred2b (ENSDCDG00000032821) #28 actr2b (ENSDCDG00000032825) #29 zgc:153169 (ENSDCDG00000032906) rab1ab (ENSDCDG00000032925) cep68 (ENSDCDG00000032975) #31 slc1a4 (ENSDCDG00000013999) #32 sertad2b (ENSDCDG00000014115) #33 lgalslb (ENSDCDG00000014126) #36 ENSDCDG00000014146 #35 ENSDCDG00000014166 ENSDCDG00000014232 peli1b (ENSDCDG00000014302) ##37 ugp2b (ENSDCDG00000014366) Otophysi ANCESTRAL SPECIES ENSGT00940000181303 ENSGT00940000157912 ENSGT00940000156543 ENSGT00390000009877 ENSGT00940000177213 ENSGT00390000008798.d.b ENSGT00940000157851 ENSGT00940000157528 ENSGT00950000183079.B ENSGT00730000111092 ENSGT00940000168294 ENSGT00390000014606 ENSGT00940000156695 ENSGT00940000165949.d ENSGT00950000182898.a.a.b ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156841.b #28 ENSGT00940000154556.c.b #29 ENSGT00940000155172 ENSGT00940000159781.a ENSGT00530000063168.b ENSGT00940000158427 ENSGT00940000177578 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b Characiphysae ANCESTRAL SPECIES 1 ENSGT00940000181303 ENSGT00940000157912 ENSGT00940000156543 ENSGT00390000009877 ENSGT00940000177213 ENSGT00390000008798.d.b ENSGT00940000157851 ENSGT00940000157528 ENSGT00950000183079.B ENSGT00730000111092 ENSGT00390000014606 ENSGT00940000156695 ENSGT00940000165949.d ENSGT00940000162658.b ENSGT00950000182898.a.a.b ENSGT00390000015405 #22 ENSGT00390000009597.c #24 Characiphysae_b ANCESTRAL SPECIES 69 ENSGT00390000002164.a ENSGT00940000181303 ENSGT00940000157912 ENSGT00940000156543 ENSGT00390000009877 ENSGT00940000177213 ENSGT00390000008798.d.b ENSGT00940000157851 ENSGT00940000157528 ENSGT00950000183079.B ENSGT00730000111092 ENSGT00390000014606 ENSGT00940000156695 ENSGT00940000165949.d ENSGT00950000182898.a.a.b ENSGT00390000015405 #22 ENSGT01030000235154 Characoidei ANCESTRAL SPECIES 93 ENSGT00390000018525.a.a ENSGT00390000002164.a ENSGT00940000181303 ENSGT00940000157912 ENSGT00940000156543 ENSGT00940000177213 ENSGT00390000008798.d.b ENSGT00940000157851 ENSGT00940000157528 ENSGT00950000183079.B ENSGT00730000111092 ENSGT00390000014606 ENSGT00940000156695 ENSGT00940000165949.d ENSGT00950000182898.a.a.b ENSGT00390000015405 #22 Red-bellied piranha MODERN SPECIES 31 CSMD1 (ENSPNAG00000026510) MYOM2 (ENSPNAG00000026564) rnaset2 (ENSPNAG00000006368) RPS6KA2 (ENSPNAG00000026695) sft2d1 (ENSPNAG00000026707) pde10a (ENSPNAG00000026924) pla2g12b (ENSPNAG00000006146) OIT3 (ENSPNAG00000027020) mcu (ENSPNAG00000027082) micu1 (ENSPNAG00000027109) nolc1 (ENSPNAG00000004192) mrps6 (ENSPNAG00000027225) psap (ENSPNAG00000027239) abcg2c (ENSPNAG00000004212) SLC29A3 (ENSPNAG00000027328) c1d (ENSPNAG00000004219) #22 Mexicana tetra MODERN SPECIES 17 ENSAMXG00000041757 ncoa4 (ENSAMXG00000015735) yipf3 (ENSAMXG00000038727) LRRC73 (ENSAMXG00000015706) ENSAMXG00000015682 DLK2 (ENSAMXG00000043523) dnph1 (ENSAMXG00000015630) mea1 (ENSAMXG00000015611) ppp2r5d (ENSAMXG00000015584) ENSAMXG00000043989 ENSAMXG00000044073 mrps6 (ENSAMXG00000026285) psap (ENSAMXG00000015025) abcg2c (ENSAMXG00000015075) SLC29A3 (ENSAMXG00000034120) c1d (ENSAMXG00000043212) #22 ENSAMXG00000039404 #24 ENSAMXG00000036122 #25 ENSAMXG00000001158 ENSAMXG00000036845 ntpcr (ENSAMXG00000041203) ENSAMXG00000041280 ENSAMXG00000029230 FOXN2 (ENSAMXG00000041365) ENSAMXG00000001146 msh6 (ENSAMXG00000001143) ENSAMXG00000040699 ENSAMXG00000037738 KCNK12 (ENSAMXG00000013483) GOLGA4 (ENSAMXG00000013535) itga9 (ENSAMXG00000013573) Electric eel MODERN SPECIES 16 RPS6KA2 (ENSEEEG00000009223) sft2d1 (ENSEEEG00000010270) PRR18 (ENSEEEG00000010271) TBXT (ENSEEEG00000010272) pde10a (ENSEEEG00000010281) ENSEEEG00000010358 pla2g12b (ENSEEEG00000010360) OIT3 (ENSEEEG00000010362) mcu (ENSEEEG00000010365) micu1 (ENSEEEG00000010395) ENSEEEG00000010798 mrps6 (ENSEEEG00000010801) psap (ENSEEEG00000010803) ENSEEEG00000010808 SLC29A3 (ENSEEEG00000010864) c1d (ENSEEEG00000010865) #22 ENSEEEG00000010867 Channel catfish MODERN SPECIES 30 ENSIPUG00000018697 cfl2 (ENSIPUG00000018686) c1d (ENSIPUG00000018661) #22 ENSIPUG00000018644 gpatch11 (ENSIPUG00000018626) ENSIPUG00000018618 sipa1l2 (ENSIPUG00000018602) Sirt1 (ENSIPUG00000018577) Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00390000018525.a.a ENSGT00390000002164.a ENSGT00940000181303 ENSGT00940000157912 ENSGT00940000156543 ENSGT00390000008798.d.b ENSGT00940000157851 ENSGT00940000157528 ENSGT00950000183079.B ENSGT00730000111092 ENSGT00940000168294 ENSGT00390000014606 ENSGT00940000156695 ENSGT00940000165949.d ENSGT00950000182898.a.a.b ENSGT00390000015405 #22 ENSGT00390000009597.c #24 ENSGT00940000156841.b #28 ENSGT00940000154556.c.b #29 ENSGT00940000155172 ENSGT00940000159781.a ENSGT00530000063168.b ENSGT00940000158427 ENSGT00940000177578 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 120 ENSGT00390000018525.a.a.n ENSGT00940000157912.d ENSGT00940000156543.b ENSGT00390000008798.d.b.g ENSGT00940000157851.f ENSGT00940000157528.l ENSGT00950000183079.B.k.a ENSGT00940000168294 ENSGT00390000014606.b ENSGT00950000183079.B.l ENSGT00730000111092.c ENSGT00390000014606.a.a ENSGT00940000156695.g ENSGT00940000165949.d ENSGT00950000182898.a.a.b.d ENSGT00390000015405.rb #22 ENSGT00940000156327.l.i.a.a #25 Cyprininae_a ANCESTRAL SPECIES 53 ENSGT00940000159956.b.b ENSGT00390000018525.a.a.n ENSGT00940000157912.d ENSGT00940000156543.b ENSGT00390000008798.d.b.g ENSGT00940000157851.f ENSGT00940000157528.l ENSGT00950000183079.B.k.a ENSGT00940000168294.d ENSGT00950000183079.B.l ENSGT00730000111092.c ENSGT00390000014606.a.a ENSGT00940000156695.g ENSGT00940000165949.d.a ENSGT00950000182898.a.a.b.d ENSGT00390000015405.rb #22 ENSGT00390000009597.c.a #24 ENSGT00940000156327.l.i.b #25 ENSGT00940000156841.b.a.a #28 ENSGT00940000154556.c.b.a.b #29 ENSGT00940000155172.m ENSGT00940000154556.c.b.a.a #29 ENSGT00940000155172.n ENSGT00940000159781.a ENSGT00530000063168.b ENSGT00940000158427.k ENSGT00940000177578 ENSGT00440000039984.a.g ENSGT00940000160277.h ENSGT00950000183147.B.j ENSGT00940000153954.p.b Golden-line barbel MODERN SPECIES 420 pde10a (ENSSGRG00000022437) pla2g12b (ENSSGRG00000022434) OIT3 (ENSSGRG00000022409) mcu (ENSSGRG00000022398) micu1 (ENSSGRG00000022397) ENSSGRG00000022395 mrps6 (ENSSGRG00000022394) psap (ENSSGRG00000022393) abcg2c (ENSSGRG00000022392) SLC29A3 (ENSSGRG00000022391) c1d (ENSSGRG00000022390) #22 meis1b (ENSSGRG00000021934) #25 spred2b (ENSSGRG00000021933) #28 actr2b (ENSSGRG00000021585) #29 phf10 (ENSSGRG00000021507) Common carp reference MODERN SPECIES 48 MYOM2 (ENSCCRG00000026449) rnaset2 (ENSCCRG00000080169) RPS6KA2 (ENSCCRG00000081628) sft2d1 (ENSCCRG00000035689) ENSCCRG00000075553 pde10a (ENSCCRG00000068909) pla2g12b (ENSCCRG00000072202) OIT3 (ENSCCRG00000018222) mcu (ENSCCRG00000018214) micu1 (ENSCCRG00000054638) ENSCCRG00000062135 mrps6 (ENSCCRG00000068193) abcg2c (ENSCCRG00000024780) psap (ENSCCRG00000058263) ENSCCRG00000025614 C1D (ENSCCRG00000061546) #22 ENSCCRG00000077133 ENSCCRG00000044445 ENSCCRG00000066123 #24 meis1b (ENSCCRG00000015609) #25 spred2b (ENSCCRG00000080175) #28 actr2b (ENSCCRG00000029183) #29 phf10 (ENSCCRG00000001266) dld (ENSCCRG00000073129) fam120b (ENSCCRG00000023850) ppm1g (ENSCCRG00000038969) si:zfos-1056e6.1 (ENSCCRG00000066192) apmap (ENSCCRG00000078269) ENSCCRG00000066381 SYNDIG1 (ENSCCRG00000009239) ENSCCRG00000006858 Goldfish MODERN SPECIES 31 ENSCARG00000006161 si:ch1073-126c3.2 (ENSCARG00000006143) ENSCARG00000006108 gfra1a (ENSCARG00000006061) ENSCARG00000067997 pde10a (ENSCARG00000067842) pla2g12b (ENSCARG00000067814) OIT3 (ENSCARG00000067793) mcu (ENSCARG00000067775) micu1 (ENSCARG00000067739) nolc1 (ENSCARG00000067703) mrps6 (ENSCARG00000067692) psap (ENSCARG00000067561) ENSCARG00000067272 SLC29A3 (ENSCARG00000067210) c1d (ENSCARG00000067192) #22 ENSCARG00000067186 #24 meis1b (ENSCARG00000067135) #25 spred2b (ENSCARG00000067122) #28 actr2b (ENSCARG00000067043) #29 phf10 (ENSCARG00000066956) ENSCARG00000066936 dld (ENSCARG00000066882) fam120b (ENSCARG00000066832) ppm1g (ENSCARG00000066740) apmap (ENSCARG00000066697) ENSCARG00000066672 SYNDIG1 (ENSCARG00000066665) ENSCARG00000065953 tuba4l (ENSCARG00000065884) ENSCARG00000065869 Cyprininae ANCESTRAL SPECIES 175 ENSGT00390000014606.a.b ENSGT00940000156695.h ENSGT00940000162658.b.a ENSGT00950000182898.a.a.b.c ENSGT00390000015405.sb #22 ENSGT00390000009597.c.b #24 ENSGT00940000156327.l.i.a.b #25 ENSGT00940000156841.b.a.b #28 ENSGT00940000154556.c.b.a.b #29 ENSGT00940000155172.m ENSGT00390000009597.c.a #24 ENSGT00940000156327.l.i.b #25 ENSGT00940000156841.b.a.a #28 ENSGT00940000154556.c.b.a.a #29 ENSGT00940000155172.n ENSGT00940000159781.a ENSGT00530000063168.b ENSGT00940000158427.k ENSGT00940000177578 ENSGT00440000039984.a.g Goldfish MODERN SPECIES 4 PRKCE (ENSCARG00000004897) ENSCARG00000004854 si:ch211-160d20.3 (ENSCARG00000004845) ENSCARG00000004843 ENSCARG00000004840 pde10a (ENSCARG00000003178) pla2g12b (ENSCARG00000003085) mcu (ENSCARG00000003010) micu1 (ENSCARG00000002821) nolc1 (ENSCARG00000002790) ENSCARG00000002788 mrps6 (ENSCARG00000002784) psap (ENSCARG00000002152) ENSCARG00000067590 SLC29A3 (ENSCARG00000067572) c1d (ENSCARG00000067562) #22 wdr11 (ENSCARG00000067510) PLPP4 (ENSCARG00000067456) ENSCARG00000067443 ENSCARG00000067436 ENSCARG00000067432 fbxo9 (ENSCARG00000067169) gclc (ENSCARG00000066926) lrrc1 (ENSCARG00000066775) ENSCARG00000066745 ENSCARG00000066741 ENSCARG00000066737 ENSCARG00000066734 FAM83B (ENSCARG00000066727) sft2d1 (ENSCARG00000066718) RPS6KA2 (ENSCARG00000066514) Cyprininae_a ANCESTRAL SPECIES 251 ENSGT00940000159956.b.a ENSGT00390000018525.a.a.m ENSGT00390000002164.a ENSGT00940000157912.c ENSGT00940000156543.a ENSGT00390000008798.d.b.h ENSGT00940000157851.e ENSGT00940000157528.k ENSGT00950000183079.B.k.b ENSGT00940000168294.c ENSGT00390000014606.b ENSGT00940000156695.h ENSGT00940000165949.d.b ENSGT00940000162658.b.a ENSGT00950000182898.a.a.b.c ENSGT00390000015405.sb #22 ENSGT00390000009597.c.b #24 ENSGT00940000156327.l.i.a.b #25 ENSGT00940000156327.l.i.a.a #25 ENSGT00940000156841.b.a.b #28 ENSGT00940000154556.c.b.b #29 Common carp reference MODERN SPECIES 18 sft2d1 (ENSCCRG00000060269) PRR18 (ENSCCRG00000028149) TBXT (ENSCCRG00000047094) pde10a (ENSCCRG00000072605) ENSCCRG00000080237 pla2g12b (ENSCCRG00000031674) OIT3 (ENSCCRG00000031678) mcu (ENSCCRG00000068125) ENSCCRG00000081194 micu1 (ENSCCRG00000081442) ENSCCRG00000071128 mrps6 (ENSCCRG00000024877) ENSCCRG00000021154 psap (ENSCCRG00000021225) ENSCCRG00000024770 C1D (ENSCCRG00000007108) #22 ENSCCRG00000066982 #24 ENSCCRG00000073654 ENSCCRG00000044582 meis1b (ENSCCRG00000066831) #25 ENSCCRG00000014014 spred2b (ENSCCRG00000054545) #28 actr2b (ENSCCRG00000038495) #29 phf10 (ENSCCRG00000038504) dld (ENSCCRG00000063931) ppm1g (ENSCCRG00000023864) APMAP (ENSCCRG00000044787) ENSCCRG00000043207 SYNDIG1 (ENSCCRG00000052830) ENSCCRG00000009151 ENSCCRG00000006806 Golden-line barbel MODERN SPECIES 46 ENSSGRG00000020379 ENSSGRG00000020378 ENSSGRG00000020377 ENSSGRG00000020376 ttll3 (ENSSGRG00000020372) SLC4A8 (ENSSGRG00000018671) ccdc174 (ENSSGRG00000018562) ghrl (ENSSGRG00000018557) tatdn2 (ENSSGRG00000018556) vhl (ENSSGRG00000018554) crbn (ENSSGRG00000018552) ENSSGRG00000018551 prkcda (ENSSGRG00000016832) tomm6 (ENSSGRG00000016807) SLC29A3 (ENSSGRG00000016805) c1d (ENSSGRG00000016804) #22 meis1b (ENSSGRG00000016686) #25 spred2b (ENSSGRG00000016683) #28 actr2b (ENSSGRG00000016509) #29 ENSSGRG00000016506 #29 phf10 (ENSSGRG00000016504) phf10 (ENSSGRG00000016499) dld (ENSSGRG00000016498) fam120b (ENSSGRG00000016497) Zebrafish MODERN SPECIES 4 phf10 (ENSDARG00000070084) actr2b (ENSDARG00000070076) #29 spred2b (ENSDARG00000008372) #28 ENSDARG00000093874 meis1b (ENSDARG00000012078) #25 ENSDARG00000078166 #24 SLC29A3 (ENSDARG00000077828) abcg2c (ENSDARG00000058574) psap (ENSDARG00000013968) mrps6 (ENSDARG00000039543) nolc1 (ENSDARG00000024561) micu1 (ENSDARG00000063358) mcu (ENSDARG00000101175) OIT3 (ENSDARG00000087227) pla2g12b (ENSDARG00000015662) c1d (ENSDARG00000021112) #22 pde10a (ENSDARG00000003449) TBXT (ENSDARG00000039806) ENSDARG00000094016 PRR18 (ENSDARG00000093768) sft2d1 (ENSDARG00000007362) ENSDARG00000089355 ENSDARG00000090054 ppp2r5d (ENSDARG00000014428) mea1 (ENSDARG00000039820) dnph1 (ENSDARG00000075730) DLK2 (ENSDARG00000076247) ENSDARG00000010681 LRRC73 (ENSDARG00000063411) yipf3 (ENSDARG00000020449) ncoa4 (ENSDARG00000021439) Elephant shark MODERN SPECIES 1508 ENSCMIG00000020016 ENSCMIG00000020015 KIF16B (ENSCMIG00000020010) OTOR (ENSCMIG00000020008) pcsk2 (ENSCMIG00000020007) BFSP1 (ENSCMIG00000020006) PROKR1 (ENSCMIG00000020005) #14 tufm (ENSCMIG00000020003) ENSCMIG00000020002 #15 fbxo48 (ENSCMIG00000020001) #16 plek (ENSCMIG00000019999) #17 cnrip1a (ENSCMIG00000019998) #18 ppp3r1a (ENSCMIG00000019996) #19 pno1 (ENSCMIG00000019995) #20 dnaaf10 (ENSCMIG00000019994) #21 c1d (ENSCMIG00000019993) #22 ENSCMIG00000019992 #24 ENSCMIG00000019991 #25 Cyclostomata ANCESTRAL SPECIES ENSGT00390000015405 #22 Hagfish MODERN SPECIES 879 ENSEBUG00000009544 ENSEBUG00000013291 ENSEBUG00000005630 ENSEBUG00000009871 ENSEBUG00000004783 ENSEBUG00000009032 slc1a4 (ENSEBUG00000002271) #32 ENSEBUG00000008007 ENSEBUG00000016835 emc7b (ENSEBUG00000014271) ENSEBUG00000002392 STS (ENSEBUG00000000851) slc37a1 (ENSEBUG00000012242) ENSEBUG00000015875 ENSEBUG00000002547 c1d (ENSEBUG00000006874) #22 ENSEBUG00000011278 hao1 (ENSEBUG00000013117) ENSEBUG00000002137 ENSEBUG00000009155 Ciona ANCESTRAL SPECIES 170 ENSGT00940000153110.D ENSGT00940000159671.f ENSGT00390000015405 #22 ENSGT01080000257410.C.h.b ENSGT01080000257410.C.h.a.b Ciona intestinalis MODERN SPECIES 2 ENSCING00000015350 ENSCING00000000626 ENSCING00000023175 ENSCING00000021771 ENSCING00000018385 ENSCING00000024863 ENSCING00000000723 ENSCING00000018550 deltex (ENSCING00000021601) ENSCING00000024126 ENSCING00000023150 ENSCING00000024557 ENSCING00000019572 ENSCING00000018287 ENSCING00000022284 ENSCING00000020906 #22 ENSCING00000022792 ENSCING00000003858 ENSCING00000018484 ENSCING00000020819 ENSCING00000020653 ENSCING00000019346 ENSCING00000020090 ENSCING00000025185 ENSCING00000022842 ENSCING00000020031 ENSCING00000003779 ENSCING00000018887 ENSCING00000024855 ENSCING00000022320 ENSCING00000016854 Ciona savignyi MODERN SPECIES 133 ENSCSAVG00000000027 ENSCSAVG00000000028 ENSCSAVG00000000033 ENSCSAVG00000000100 ENSCSAVG00000000101 ENSCSAVG00000000102 ENSCSAVG00000000122 ENSCSAVG00000000123 ENSCSAVG00000000124 ENSCSAVG00000000144 ENSCSAVG00000000145 ENSCSAVG00000000147 ENSCSAVG00000000149 ENSCSAVG00000000150 #22 ENSCSAVG00000000151 ENSCSAVG00000000166 ENSCSAVG00000000168 ENSCSAVG00000000169 ENSCSAVG00000000174 ENSCSAVG00000000175 ENSCSAVG00000000176 ENSCSAVG00000000177 ENSCSAVG00000000178 ENSCSAVG00000000180 ENSCSAVG00000000181 ENSCSAVG00000000182 ENSCSAVG00000000183 ENSCSAVG00000000186 Ecdysozoa ANCESTRAL SPECIES ENSGT00390000015405 #22 Caenorhabditis elegans MODERN SPECIES 1 alh-6 (WBGene00000112) fcho-1 (WBGene00018974) vig-1 (WBGene00006924) jip-1 (WBGene00002176) C13A10.1 (WBGene00015728) C13A10.2 (WBGene00015729) rog-1 (WBGene00018819) F54D12.10 (WBGene00044424) F54D12.9 (WBGene00018822) F54D12.7 (WBGene00018820) aat-7 (WBGene00000008) F54D12.8 (WBGene00018821) F54D12.2 (WBGene00018816) F54D12.1 (WBGene00018815) Y51H7C.8 (WBGene00021786) Y51H7C.7 (WBGene00021785) #22 Y51H7C.41 (WBGene00302984) cogc-4 (WBGene00021784) Y51H7C.9 (WBGene00021787) alkb-1 (WBGene00021783) Y51H7C.10 (WBGene00021788) nol-6 (WBGene00021789) Y51H7C.3 (WBGene00021781) Y51H7C.12 (WBGene00021790) scl-17 (WBGene00021780) Y51H7C.13 (WBGene00021791) Y51H7C.1 (WBGene00021779) H17B01.2 (WBGene00000646) H17B01.5 (WBGene00044643) emc-1 (WBGene00019209) fgt-1 (WBGene00019207)