Gnathostomata	ANCESTRAL SPECIES	520															ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT00390000018549 #31	ENSGT00940000157250 #32
Euteleostomi	ANCESTRAL SPECIES		ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Sarcopterygii	ANCESTRAL SPECIES	2	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00940000159570	ENSGT00940000159423
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Amniota	ANCESTRAL SPECIES	2	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Mammalia	ANCESTRAL SPECIES	1	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Theria	ANCESTRAL SPECIES	6	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Primates	ANCESTRAL SPECIES	10	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00910000147402	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000154437.mc.a.a.b.b	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Macaca	ANCESTRAL SPECIES	25	ENSGT00910000147402	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000154437.mc.a.a.b.b	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C.i #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00910000147402	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00950000183041.A.f	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C.i #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Rhesus	MODERN SPECIES	15	OTOP1 (ENSMMUG00000002782) #7	TMEM128 (ENSMMUG00000023242) #8	LYAR (ENSMMUG00000023393) #9	ZBTB49 (ENSMMUG00000023394) #10	NSG1 (ENSMMUG00000020203) #11	STX18 (ENSMMUG00000020204) #12	ENSMMUG00000065275 #13	MSX1 (ENSMMUG00000051198) #14	CYTL1 (ENSMMUG00000016921) #15	STK32B (ENSMMUG00000016922) #16	EVC2 (ENSMMUG00000020860) #17	EVC (ENSMMUG00000020861) #18	CRMP1 (ENSMMUG00000019563) #19	ENSMMUG00000023152 #20	JAKMIP1 (ENSMMUG00000015099) #21	WFS1 (ENSMMUG00000013414) #22	PPP2R2C (ENSMMUG00000013416) #23	MAN2B2 (ENSMMUG00000005298) #24	MRFAP1 (ENSMMUG00000021695) #25	ENSMMUG00000060097 #26	ENSMMUG00000064424 #27	S100P (ENSMMUG00000021887) #28	MRFAP1L1 (ENSMMUG00000021886) #29	BLOC1S4 (ENSMMUG00000049992) #30	KIAA0232 (ENSMMUG00000016999) #31	TBC1D14 (ENSMMUG00000017000) #32	CCDC96 (ENSMMUG00000017001) #33	TADA2B (ENSMMUG00000049270) #34	GRPEL1 (ENSMMUG00000064900) #35	PSAPL1 (ENSMMUG00000051974) #36	SORCS2 (ENSMMUG00000022416) #37
Crab-eating macaque	MODERN SPECIES	15	LYAR (ENSMFAG00000032542) #9	ZBTB49 (ENSMFAG00000043670) #10	ENSMFAG00000052259	NSG1 (ENSMFAG00000043521) #11	ENSMFAG00000040854	STX18 (ENSMFAG00000043473) #12	ENSMFAG00000038843	ENSMFAG00000002991 #15	ENSMFAG00000060574 ##26	STK32B (ENSMFAG00000046080) #16	EVC2 (ENSMFAG00000037744) #17	EVC (ENSMFAG00000035895) #18	CRMP1 (ENSMFAG00000000318) #19	ENSMFAG00000038554 #20	JAKMIP1 (ENSMFAG00000036205) #21	WFS1 (ENSMFAG00000040639) #22	PPP2R2C (ENSMFAG00000000990) #23	MAN2B2 (ENSMFAG00000034516) #24	ENSMFAG00000011252 #25	ENSMFAG00000064380 #27	S100P (ENSMFAG00000042181) #28	MRFAP1L1 (ENSMFAG00000056896) #29	KIAA0232 (ENSMFAG00000034581) #31	TBC1D14 (ENSMFAG00000034270) #32	TADA2B (ENSMFAG00000002501) #34	GRPEL1 (ENSMFAG00000059933) #35	ENSMFAG00000058444	AFAP1 (ENSMFAG00000039822)	ABLIM2 (ENSMFAG00000033256)	ENSMFAG00000064819	ENSMFAG00000036846
Pig-tailed macaque	MODERN SPECIES	590										STK32B (ENSMNEG00000041736) #16	EVC2 (ENSMNEG00000042051) #17	EVC (ENSMNEG00000037708) #18	CRMP1 (ENSMNEG00000031793) #19	C4orf50 (ENSMNEG00000043423) #20	JAKMIP1 (ENSMNEG00000003143) #21	WFS1 (ENSMNEG00000030212) #22	PPP2R2C (ENSMNEG00000031702) #23	MAN2B2 (ENSMNEG00000042273) #24	ENSMNEG00000021899 #27	S100P (ENSMNEG00000041835) #28	MRFAP1L1 (ENSMNEG00000017988) #29	BLOC1S4 (ENSMNEG00000022723) #30	KIAA0232 (ENSMNEG00000044759) #31	ENSMNEG00000028403	TBC1D14 (ENSMNEG00000040107) #32	TADA2B (ENSMNEG00000044586) #34	GRPEL1 (ENSMNEG00000038054) #35	SORCS2 (ENSMNEG00000042007) #37	AFAP1 (ENSMNEG00000004303)	ABLIM2 (ENSMNEG00000027537)	ENSMNEG00000042252
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00910000147402	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000154437.mc.a.a.b.b	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36
Cercopithecinae_d	ANCESTRAL SPECIES	85											ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a
Drill	MODERN SPECIES	1409											EVC2 (ENSMLEG00000042188) #17	EVC (ENSMLEG00000031292) #18	CRMP1 (ENSMLEG00000038947) #19	C4orf50 (ENSMLEG00000042230) #20	JAKMIP1 (ENSMLEG00000040554) #21	WFS1 (ENSMLEG00000043917) #22	PPP2R2C (ENSMLEG00000026416) #23	MAN2B2 (ENSMLEG00000038325) #24	MRFAP1 (ENSMLEG00000042203) #25	ENSMLEG00000017347 #27	S100P (ENSMLEG00000010727) #28	MRFAP1L1 (ENSMLEG00000026396) #29	BLOC1S4 (ENSMLEG00000018555) #30	KIAA0232 (ENSMLEG00000043346) #31	ENSMLEG00000031353	TBC1D14 (ENSMLEG00000029496) #32	TADA2B (ENSMLEG00000039869) #34	GRPEL1 (ENSMLEG00000009386) #35	SORCS2 (ENSMLEG00000043723) #37	AFAP1 (ENSMLEG00000033195)	ABLIM2 (ENSMLEG00000044169)
Sooty mangabey	MODERN SPECIES	649											EVC2 (ENSCATG00000033216) #17	EVC (ENSCATG00000003773) #18	CRMP1 (ENSCATG00000037456) #19	C4orf50 (ENSCATG00000034535) #20	JAKMIP1 (ENSCATG00000025554) #21	WFS1 (ENSCATG00000003876) #22	PPP2R2C (ENSCATG00000029704) #23	MAN2B2 (ENSCATG00000030238) #24	ENSCATG00000017778 #27	S100P (ENSCATG00000041338) #28	MRFAP1L1 (ENSCATG00000019249) #29	BLOC1S4 (ENSCATG00000021995) #30	KIAA0232 (ENSCATG00000036186) #31	ENSCATG00000017471	TBC1D14 (ENSCATG00000040958) #32	TADA2B (ENSCATG00000042413) #34	GRPEL1 (ENSCATG00000041445) #35	SORCS2 (ENSCATG00000033134) #37	AFAP1 (ENSCATG00000038081)	ABLIM2 (ENSCATG00000030535)	SH3TC1 (ENSCATG00000035668)
Olive baboon	MODERN SPECIES	13	LYAR (ENSPANG00000021311) #9	ZBTB49 (ENSPANG00000015665) #10	ENSPANG00000044702	NSG1 (ENSPANG00000005675) #11	STX18 (ENSPANG00000002440) #12	MSX1 (ENSPANG00000046134) #14	ENSPANG00000035444	CYTL1 (ENSPANG00000044324) #15	STK32B (ENSPANG00000019894) #16	ENSPANG00000039059	EVC2 (ENSPANG00000025947) #17	EVC (ENSPANG00000025494) #18	CRMP1 (ENSPANG00000019104) #19	C4orf50 (ENSPANG00000033830) #20	JAKMIP1 (ENSPANG00000013336) #21	WFS1 (ENSPANG00000041890) #22	PPP2R2C (ENSPANG00000010162) #23	MAN2B2 (ENSPANG00000016783) #24	MRFAP1 (ENSPANG00000045517) #25	ENSPANG00000035451 #27	S100P (ENSPANG00000047415) #28	MRFAP1L1 (ENSPANG00000038060) #29	BLOC1S4 (ENSPANG00000019574) #30	KIAA0232 (ENSPANG00000007833) #31	TBC1D14 (ENSPANG00000008521) #32	ENSPANG00000011790 #33	TADA2B (ENSPANG00000007240) #34	GRPEL1 (ENSPANG00000042460) #35	ENSPANG00000043330	SORCS2 (ENSPANG00000013337) #37	PSAPL1 (ENSPANG00000047107) #36
Vervet Monkey	MODERN SPECIES	19	DRD5 (ENSCSAG00000019701)	OTOP1 (ENSCSAG00000016285) #7	TMEM128 (ENSCSAG00000016276) #8	LYAR (ENSCSAG00000016273) #9	ZBTB49 (ENSCSAG00000016270) #10	NSG1 (ENSCSAG00000016265) #11	STX18 (ENSCSAG00000016261) #12	MSX1 (ENSCSAG00000016256) #14	CYTL1 (ENSCSAG00000016252) #15	STK32B (ENSCSAG00000016248) #16	EVC2 (ENSCSAG00000016225) #17	EVC (ENSCSAG00000016173) #18	CRMP1 (ENSCSAG00000016164) #19	ENSCSAG00000016155 #20	JAKMIP1 (ENSCSAG00000016146) #21	WFS1 (ENSCSAG00000016125) #22	PPP2R2C (ENSCSAG00000016118) #23	MAN2B2 (ENSCSAG00000016111) #24	MRFAP1 (ENSCSAG00000016101) #25	S100P (ENSCSAG00000016092) #28	MRFAP1L1 (ENSCSAG00000016085) #29	BLOC1S4 (ENSCSAG00000019702) #30	KIAA0232 (ENSCSAG00000016061) #31	TBC1D14 (ENSCSAG00000016054) #32	ENSCSAG00000019703 #33	TADA2B (ENSCSAG00000016045) #34	GRPEL1 (ENSCSAG00000016043) #35	PSAPL1 (ENSCSAG00000019704) #36	AFAP1 (ENSCSAG00000016020)	ABLIM2 (ENSCSAG00000016010)	SH3TC1 (ENSCSAG00000015999)
Rhinopithecus	ANCESTRAL SPECIES	143	ENSGT00910000147402	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b.c #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a
Golden snub-nosed monkey	MODERN SPECIES	1478										STK32B (ENSRROG00000007307) #16	EVC2 (ENSRROG00000036807) #17	EVC (ENSRROG00000020366) #18	CRMP1 (ENSRROG00000029545) #19	C4orf50 (ENSRROG00000044084) #20	JAKMIP1 (ENSRROG00000038557) #21	WFS1 (ENSRROG00000029987) #22	PPP2R2C (ENSRROG00000045326) #23	MAN2B2 (ENSRROG00000041962) #24	ENSRROG00000020151 #27	S100P (ENSRROG00000044147) #28	MRFAP1L1 (ENSRROG00000013722) #29	ENSRROG00000028251 #30	KIAA0232 (ENSRROG00000028934) #31	ENSRROG00000044087	TBC1D14 (ENSRROG00000043690) #32	TADA2B (ENSRROG00000028976) #34	GRPEL1 (ENSRROG00000011503) #35	SORCS2 (ENSRROG00000038217) #37	AFAP1 (ENSRROG00000038243)	ABLIM2 (ENSRROG00000038815)
Black snub-nosed monkey	MODERN SPECIES	855							STMND1 (ENSRBIG00000041644)	ATXN1 (ENSRBIG00000028213)	ENSRBIG00000015810	GMPR (ENSRBIG00000032219)	ENSRBIG00000040626 #17	EVC (ENSRBIG00000034731) #18	CRMP1 (ENSRBIG00000041285) #19	C4orf50 (ENSRBIG00000044367) #20	JAKMIP1 (ENSRBIG00000040868) #21	WFS1 (ENSRBIG00000030817) #22	PPP2R2C (ENSRBIG00000033131) #23
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Hominidae	ANCESTRAL SPECIES	12	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Gorilla	MODERN SPECIES	17	TMEM128 (ENSGGOG00000013003) #8	LYAR (ENSGGOG00000013006) #9	ZBTB49 (ENSGGOG00000013012) #10	NSG1 (ENSGGOG00000011113) #11	STX18 (ENSGGOG00000011121) #12	ENSGGOG00000028508	MSX1 (ENSGGOG00000009110) #14	ENSGGOG00000015254	CYTL1 (ENSGGOG00000006735) #15	STK32B (ENSGGOG00000010067) #16	EVC2 (ENSGGOG00000013705) #17	EVC (ENSGGOG00000013719) #18	CRMP1 (ENSGGOG00000013731) #19	C4orf50 (ENSGGOG00000042678) #20	JAKMIP1 (ENSGGOG00000015746) #21	WFS1 (ENSGGOG00000003492) #22	PPP2R2C (ENSGGOG00000003495) #23	MAN2B2 (ENSGGOG00000008067) #24	ENSGGOG00000040669 #25	ENSGGOG00000036653 #27	ENSGGOG00000023517	S100P (ENSGGOG00000027028) #28	MRFAP1L1 (ENSGGOG00000038267) #29	BLOC1S4 (ENSGGOG00000007549) #30	KIAA0232 (ENSGGOG00000015102) #31	TBC1D14 (ENSGGOG00000016363) #32	ENSGGOG00000016381 #33	TADA2B (ENSGGOG00000016386) #34	GRPEL1 (ENSGGOG00000016390) #35	SORCS2 (ENSGGOG00000015807) #37	PSAPL1 (ENSGGOG00000002811) #36
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00950000183337	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Human	MODERN SPECIES	16	OTOP1 (ENSG00000163982) #7	TMEM128 (ENSG00000132406) #8	LYAR (ENSG00000145220) #9	ZBTB49 (ENSG00000168826) #10	NSG1 (ENSG00000168824) #11	STX18 (ENSG00000168818) #12	MSX1 (ENSG00000163132) #14	CYTL1 (ENSG00000170891) #15	STK32B (ENSG00000152953) #16	EVC2 (ENSG00000173040) #17	EVC (ENSG00000072840) #18	CRMP1 (ENSG00000072832) #19	C4orf50 (ENSG00000181215) #20	JAKMIP1 (ENSG00000152969) #21	ENSG00000284684	WFS1 (ENSG00000109501) #22	PPP2R2C (ENSG00000074211) #23	MAN2B2 (ENSG00000013288) #24	MRFAP1 (ENSG00000179010) #25	ENSG00000170846 #27	S100P (ENSG00000163993) #28	MRFAP1L1 (ENSG00000178988) #29	BLOC1S4 (ENSG00000186222) #30	KIAA0232 (ENSG00000170871) #31	TBC1D14 (ENSG00000132405) #32	CCDC96 (ENSG00000173013)	TADA2B (ENSG00000173011) #34	GRPEL1 (ENSG00000109519) #35	SORCS2 (ENSG00000184985) #37	PSAPL1 (ENSG00000178597) #36	AFAP1 (ENSG00000196526)
Pan	ANCESTRAL SPECIES	7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853.c #12	ENSGT00390000014122.i.b.a.a.a.b	ENSGT00940000161623 #14	ENSGT00940000153201.j.k.a.a.a.b.b.b.b	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00910000147514	ENSGT00940000157250 #32	ENSGT00950000183337	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37
Chimpanzee	MODERN SPECIES	17	TMEM128 (ENSPTRG00000015866) #8	LYAR (ENSPTRG00000015867) #9	ZBTB49 (ENSPTRG00000015868) #10	NSG1 (ENSPTRG00000015869) #11	STX18 (ENSPTRG00000047154) #12	ENSPTRG00000046450	MSX1 (ENSPTRG00000015871) #14	ENSPTRG00000050437	CYTL1 (ENSPTRG00000015872) #15	STK32B (ENSPTRG00000015873) #16	EVC2 (ENSPTRG00000015875) #17	EVC (ENSPTRG00000015877) #18	CRMP1 (ENSPTRG00000015878) #19	C4H4orf50 (ENSPTRG00000015879) #20	JAKMIP1 (ENSPTRG00000015881) #21	WFS1 (ENSPTRG00000050026) #22	PPP2R2C (ENSPTRG00000015883) #23	MAN2B2 (ENSPTRG00000048091) #24	ENSPTRG00000046653 #25	ENSPTRG00000047908 #27	S100P (ENSPTRG00000015887) #28	MRFAP1L1 (ENSPTRG00000015888) #29	BLOC1S4 (ENSPTRG00000051001) #30	KIAA0232 (ENSPTRG00000015890) #31	ENSPTRG00000052189	TBC1D14 (ENSPTRG00000015892) #32	CCDC96 (ENSPTRG00000020278)	TADA2B (ENSPTRG00000015893) #34	GRPEL1 (ENSPTRG00000015894) #35	SORCS2 (ENSPTRG00000015895) #37	PSAPL1 (ENSPTRG00000031269) #36
Bonobo	MODERN SPECIES	17	TMEM128 (ENSPPAG00000032192) #8	LYAR (ENSPPAG00000036565) #9	ZBTB49 (ENSPPAG00000028054) #10	NSG1 (ENSPPAG00000029525) #11	STX18 (ENSPPAG00000033946) #12	ENSPPAG00000030316	MSX1 (ENSPPAG00000032954) #14	ENSPPAG00000027840	CYTL1 (ENSPPAG00000038788) #15	STK32B (ENSPPAG00000043748) #16	EVC2 (ENSPPAG00000032088) #17	EVC (ENSPPAG00000039832) #18	CRMP1 (ENSPPAG00000036210) #19	C4orf50 (ENSPPAG00000037355) #20	JAKMIP1 (ENSPPAG00000037524) #21	WFS1 (ENSPPAG00000038761) #22	PPP2R2C (ENSPPAG00000039417) #23	MAN2B2 (ENSPPAG00000028247) #24	ENSPPAG00000035212 #25	ENSPPAG00000042290 #27	S100P (ENSPPAG00000017625) #28	MRFAP1L1 (ENSPPAG00000007021) #29	BLOC1S4 (ENSPPAG00000012058) #30	KIAA0232 (ENSPPAG00000037105) #31	ENSPPAG00000034425	TBC1D14 (ENSPPAG00000039444) #32	TADA2B (ENSPPAG00000034890) #34	GRPEL1 (ENSPPAG00000013236) #35	SORCS2 (ENSPPAG00000036554) #37	ENSPPAG00000025997 #36	AFAP1 (ENSPPAG00000002142)
Orangutan	MODERN SPECIES	17	OTOP1 (ENSPPYG00000014603) #7	TMEM128 (ENSPPYG00000034463) #8	LYAR (ENSPPYG00000031086) #9	ZBTB49 (ENSPPYG00000014601) #10	NSG1 (ENSPPYG00000034452) #11	STX18 (ENSPPYG00000014598) #12	MSX1 (ENSPPYG00000014597) #14	ENSPPYG00000030828	CYTL1 (ENSPPYG00000014596) #15	STK32B (ENSPPYG00000014595) #16	EVC2 (ENSPPYG00000014593) #17	EVC (ENSPPYG00000014592) #18	CRMP1 (ENSPPYG00000029716) #19	C4orf50 (ENSPPYG00000035141) #20	JAKMIP1 (ENSPPYG00000014590) #21	WFS1 (ENSPPYG00000014589) #22	PPP2R2C (ENSPPYG00000014588) #23	MAN2B2 (ENSPPYG00000014586) #24	MRFAP1 (ENSPPYG00000025866) #25	ENSPPYG00000014584 #27	S100P (ENSPPYG00000014582) #28	MRFAP1L1 (ENSPPYG00000014581) #29	BLOC1S4 (ENSPPYG00000014580) #30	KIAA0232 (ENSPPYG00000014579) #31	TBC1D14 (ENSPPYG00000014578) #32	CCDC96 (ENSPPYG00000014575)	TADA2B (ENSPPYG00000041568) #34	GRPEL1 (ENSPPYG00000035781) #35	PSAPL1 (ENSPPYG00000014572) #36	SORCS2 (ENSPPYG00000014571) #37	AFAP1 (ENSPPYG00000014569)
Gibbon	MODERN SPECIES	12	TMEM128 (ENSNLEG00000035157) #8	LYAR (ENSNLEG00000016149) #9	ZBTB49 (ENSNLEG00000016142) #10	ENSNLEG00000016136 #11	STX18 (ENSNLEG00000016132) #12	MSX1 (ENSNLEG00000016128) #14	ENSNLEG00000030902	CYTL1 (ENSNLEG00000016118) #15	ENSNLEG00000016106 #16	EVC2 (ENSNLEG00000016102) #17	ENSNLEG00000018956	EVC (ENSNLEG00000016101) #18	CRMP1 (ENSNLEG00000016061) #19	ENSNLEG00000032062 #20	JAKMIP1 (ENSNLEG00000016032) #21	WFS1 (ENSNLEG00000011751) #22	PPP2R2C (ENSNLEG00000011766) #23	MAN2B2 (ENSNLEG00000011788) #24	ENSNLEG00000011791 #25	ENSNLEG00000019117 #27	S100P (ENSNLEG00000011798) #28	MRFAP1L1 (ENSNLEG00000011799) #29	KIAA0232 (ENSNLEG00000011801) #31	TBC1D14 (ENSNLEG00000011813) #32	ENSNLEG00000011821 #33	TADA2B (ENSNLEG00000011820) #34	GRPEL1 (ENSNLEG00000011822) #35	ENSNLEG00000011834 #37	PSAPL1 (ENSNLEG00000019118) #36	AFAP1 (ENSNLEG00000011850)	ABLIM2 (ENSNLEG00000011868)
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a
Cebidae_a	ANCESTRAL SPECIES	34	ENSGT00940000159192	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Capuchin	MODERN SPECIES	117	OTOP1 (ENSCCAG00000036786) #7	TMEM128 (ENSCCAG00000025079) #8	LYAR (ENSCCAG00000023180) #9	ENSCCAG00000023428 #10	NSG1 (ENSCCAG00000031880) #11	STX18 (ENSCCAG00000023114) #12	LSM3 (ENSCCAG00000032763)	MSX1 (ENSCCAG00000037296) #14	CYTL1 (ENSCCAG00000030813) #15	STK32B (ENSCCAG00000030071) #16	EVC2 (ENSCCAG00000035517) #17	EVC (ENSCCAG00000020002) #18	CRMP1 (ENSCCAG00000024920) #19	ENSCCAG00000036526 #20	JAKMIP1 (ENSCCAG00000026955) #21	WFS1 (ENSCCAG00000023081) #22	PPP2R2C (ENSCCAG00000032397) #23	MAN2B2 (ENSCCAG00000022428) #24	ENSCCAG00000018562 #27	S100P (ENSCCAG00000029281) #28	ENSCCAG00000030741	ENSCCAG00000019962 #29	ENSCCAG00000033200	KIAA0232 (ENSCCAG00000023673) #31	TBC1D14 (ENSCCAG00000019475) #32	TADA2B (ENSCCAG00000027900) #34	GRPEL1 (ENSCCAG00000036101) #35	SORCS2 (ENSCCAG00000021696) #37	AFAP1 (ENSCCAG00000028544)	ABLIM2 (ENSCCAG00000025531)	SH3TC1 (ENSCCAG00000027117)
Bolivian squirrel monkey	MODERN SPECIES	108	TMEM128 (ENSSBOG00000000856) #8	LYAR (ENSSBOG00000023039) #9	ZBTB49 (ENSSBOG00000023351) #10	NSG1 (ENSSBOG00000031831) #11	STX18 (ENSSBOG00000031642) #12	ENSSBOG00000024913	MSX1 (ENSSBOG00000023796) #14	CYTL1 (ENSSBOG00000022008) #15	ENSSBOG00000013315	STK32B (ENSSBOG00000032641) #16	EVC2 (ENSSBOG00000020726) #17	EVC (ENSSBOG00000029689) #18	CRMP1 (ENSSBOG00000025675) #19	ENSSBOG00000025885 #20	JAKMIP1 (ENSSBOG00000021767) #21	WFS1 (ENSSBOG00000034393) #22	PPP2R2C (ENSSBOG00000033832) #23	MAN2B2 (ENSSBOG00000029632) #24	ENSSBOG00000008810 #27	S100P (ENSSBOG00000027690) #28	MRFAP1L1 (ENSSBOG00000033309) #29	KIAA0232 (ENSSBOG00000026766) #31	TBC1D14 (ENSSBOG00000029945) #32	TADA2B (ENSSBOG00000033366) #34	GRPEL1 (ENSSBOG00000023402) #35	ENSSBOG00000029303	SORCS2 (ENSSBOG00000027153) #37	AFAP1 (ENSSBOG00000027624)	ABLIM2 (ENSSBOG00000018472)	SH3TC1 (ENSSBOG00000025058)	HTRA3 (ENSSBOG00000019152)
Marmoset	MODERN SPECIES	15	TMEM128 (ENSCJAG00000000112) #8	LYAR (ENSCJAG00000000114) #9	ZBTB49 (ENSCJAG00000000119) #10	ENSCJAG00000071254	ENSCJAG00000000128 #11	STX18 (ENSCJAG00000000139) #12	MSX1 (ENSCJAG00000011280) #14	CYTL1 (ENSCJAG00000011895) #15	ENSCJAG00000041353	STK32B (ENSCJAG00000011911) #16	EVC2 (ENSCJAG00000010561) #17	EVC (ENSCJAG00000010606) #18	CRMP1 (ENSCJAG00000010648) #19	C4orf50 (ENSCJAG00000045596) #20	JAKMIP1 (ENSCJAG00000010675) #21	WFS1 (ENSCJAG00000017354) #22	PPP2R2C (ENSCJAG00000017336) #23	MAN2B2 (ENSCJAG00000004190) #24	MRFAP1 (ENSCJAG00000076429) #25	ENSCJAG00000022014 #27	S100P (ENSCJAG00000055083) #28	MRFAP1L1 (ENSCJAG00000082845) #29	BLOC1S4 (ENSCJAG00000033540) #30	KIAA0232 (ENSCJAG00000004174) #31	TBC1D14 (ENSCJAG00000004156) #32	ENSCJAG00000004152 #33	TADA2B (ENSCJAG00000004932) #34	GRPEL1 (ENSCJAG00000040936) #35	SORCS2 (ENSCJAG00000001022) #37	PSAPL1 (ENSCJAG00000063407) #36	AFAP1 (ENSCJAG00000001034)
Mas night monkey	MODERN SPECIES	392	LYAR (ENSANAG00000035035) #9	ZBTB49 (ENSANAG00000024606) #10	NSG1 (ENSANAG00000019982) #11	STX18 (ENSANAG00000028430) #12	ENSANAG00000020420	MSX1 (ENSANAG00000036016) #14	CYTL1 (ENSANAG00000028452) #15	ENSANAG00000024024	STK32B (ENSANAG00000025404) #16	ENSANAG00000036380	EVC2 (ENSANAG00000031307) #17	EVC (ENSANAG00000035238) #18	CRMP1 (ENSANAG00000032837) #19	C4orf50 (ENSANAG00000035260) #20	JAKMIP1 (ENSANAG00000031973) #21	WFS1 (ENSANAG00000033020) #22
Tarsier	MODERN SPECIES	1283																ENSTSYG00000026084 #22
Strepsirrhini	ANCESTRAL SPECIES	40	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.q.b #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a
Lemuriformes	ANCESTRAL SPECIES	44	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00910000148226	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.q.b #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00910000144269
Mouse lemur	MODERN SPECIES	9	SNAP25 (ENSMICG00000003556)	MKKS (ENSMICG00000043988)	SLX4IP (ENSMICG00000005604)	JAG1 (ENSMICG00000005608)	ENSMICG00000044766	SPTLC3 (ENSMICG00000002259)	ISM1 (ENSMICG00000027224)	TASP1 (ENSMICG00000013556)	ESF1 (ENSMICG00000010711)	NDUFAF5 (ENSMICG00000011449)	SEL1L2 (ENSMICG00000011457)	MACROD2 (ENSMICG00000038471)	FLRT3 (ENSMICG00000043599)	ENSMICG00000042898	ENSMICG00000045752	WFS1 (ENSMICG00000028651) #22	PPP2R2C (ENSMICG00000007446) #23	MAN2B2 (ENSMICG00000007904) #24	S100P (ENSMICG00000034145) #28	ENSMICG00000041611	KIAA0232 (ENSMICG00000032016) #31	ENSMICG00000007951 #32	CCDC96 (ENSMICG00000007976)	TADA2B (ENSMICG00000033119) #34	ENSMICG00000043820 #35	SORCS2 (ENSMICG00000011732) #37	AFAP1 (ENSMICG00000005712)	ENSMICG00000033823	ENSMICG00000033614	ABLIM2 (ENSMICG00000005733)	SH3TC1 (ENSMICG00000013247)
Lemuriformes_a	ANCESTRAL SPECIES	93	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00910000148226	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.q.b #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a
Greater bamboo lemur	MODERN SPECIES	139			TMEM128 (ENSPSMG00000017548) #8	LYAR (ENSPSMG00000017530) #9	ZBTB49 (ENSPSMG00000017522) #10	NSG1 (ENSPSMG00000017493) #11	STX18 (ENSPSMG00000017430) #12	MSX1 (ENSPSMG00000017415) #14	ENSPSMG00000017413	STK32B (ENSPSMG00000017394) #16	EVC2 (ENSPSMG00000017311) #17	EVC (ENSPSMG00000017286) #18	CRMP1 (ENSPSMG00000017113) #19	ENSPSMG00000016969 #20	JAKMIP1 (ENSPSMG00000016950) #21	WFS1 (ENSPSMG00000016846) #22	PPP2R2C (ENSPSMG00000016689) #23	MAN2B2 (ENSPSMG00000016262) #24	ENSPSMG00000016096 #25	ENSPSMG00000016080 #27
Coquerels sifaka	MODERN SPECIES	1038																WFS1 (ENSPCOG00000014652) #22	PPP2R2C (ENSPCOG00000015338) #23	MAN2B2 (ENSPCOG00000012636) #24	S100P (ENSPCOG00000005888) #28	ENSPCOG00000003775	MRFAP1L1 (ENSPCOG00000011164) #29	KIAA0232 (ENSPCOG00000022933) #31
Bushbaby	MODERN SPECIES	286	SLC2A9 (ENSOGAG00000000323)	DRD5 (ENSOGAG00000000322)	OTOP1 (ENSOGAG00000028375) #7	TMEM128 (ENSOGAG00000000984) #8	ZBTB49 (ENSOGAG00000000988) #10	NSG1 (ENSOGAG00000031298) #11	STX18 (ENSOGAG00000008553) #12	MSX1 (ENSOGAG00000013811) #14	CYTL1 (ENSOGAG00000004322) #15	STK32B (ENSOGAG00000011270) #16	EVC2 (ENSOGAG00000000557) #17	EVC (ENSOGAG00000000561) #18	CRMP1 (ENSOGAG00000000564) #19	ENSOGAG00000000566 #20	JAKMIP1 (ENSOGAG00000011335) #21	WFS1 (ENSOGAG00000012987) #22	PPP2R2C (ENSOGAG00000011580) #23	MAN2B2 (ENSOGAG00000013656) #24	ENSOGAG00000031496 #25
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00530000066358	ENSGT00950000182850.a.b.a.a
Tree shrew	MODERN SPECIES	297																WFS1 (ENSTBEG00000007413) #22	ENSTBEG00000007965 #23
Glires	ANCESTRAL SPECIES	8	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Chinese hamster chok1gshd	MODERN SPECIES	44	Drd5 (ENSCGRG00001000668)	Otop1 (ENSCGRG00001016492) #7	Tmem128 (ENSCGRG00001013920) #8	Lyar (ENSCGRG00001012784) #9	Zbtb49 (ENSCGRG00001001097) #10	Nsg1 (ENSCGRG00001012496) #11	Stx18 (ENSCGRG00001004947) #12	Msx1 (ENSCGRG00001022584) #14	Cytl1 (ENSCGRG00001022429) #15	Stk32b (ENSCGRG00001017745) #16	Evc2 (ENSCGRG00001015737) #17	Evc (ENSCGRG00001018880) #18	Crmp1 (ENSCGRG00001014626) #19	Gm1043 (ENSCGRG00001016958) #20	Jakmip1 (ENSCGRG00001024145) #21	Wfs1 (ENSCGRG00001022731) #22	Ppp2r2c (ENSCGRG00001019071) #23	Man2b2 (ENSCGRG00001016058) #24	Mrfap1 (ENSCGRG00001009764) #25	Bloc1s4 (ENSCGRG00001011319) #30	D5Ertd579e (ENSCGRG00001005712) #31	Tbc1d14 (ENSCGRG00001017768) #32	Ccdc96 (ENSCGRG00001013284) #33	Tada2b (ENSCGRG00001010287) #34	Grpel1 (ENSCGRG00001009780) #35	ENSCGRG00001001259	Psapl1 (ENSCGRG00001012581) #36	Sorcs2 (ENSCGRG00001014802) #37	Afap1 (ENSCGRG00001022799)	Ablim2 (ENSCGRG00001019600)	Sh3tc1 (ENSCGRG00001019370)
Golden Hamster	MODERN SPECIES	632	ENSMAUG00000014456 #8	ENSMAUG00000021998 #9	Zbtb49 (ENSMAUG00000018552) #10	Nsg1 (ENSMAUG00000020630) #11	Stx18 (ENSMAUG00000002981) #12	Msx1 (ENSMAUG00000010574) #14	Cytl1 (ENSMAUG00000013788) #15	Stk32b (ENSMAUG00000010264) #16	Evc2 (ENSMAUG00000014715) #17	Evc (ENSMAUG00000000919) #18	ENSMAUG00000008026	Crmp1 (ENSMAUG00000006309) #19	Gm1043 (ENSMAUG00000006911) #20	ENSMAUG00000001336 #21	ENSMAUG00000008007 #21	Wfs1 (ENSMAUG00000021403) #22	Ppp2r2c (ENSMAUG00000013526) #23	Man2b2 (ENSMAUG00000010000) #24	Mrfap1 (ENSMAUG00000019876) #25	Bloc1s4 (ENSMAUG00000009210) #30	D5Ertd579e (ENSMAUG00000017750) #31	Tbc1d14 (ENSMAUG00000012045) #32	Ccdc96 (ENSMAUG00000017336) #33	Tada2b (ENSMAUG00000011750) #34	Grpel1 (ENSMAUG00000021692) #35	Sorcs2 (ENSMAUG00000017879) #37	Afap1 (ENSMAUG00000011963)	Ablim2 (ENSMAUG00000015012)	Sh3tc1 (ENSMAUG00000021685)	Htra3 (ENSMAUG00000005565)	Acox3 (ENSMAUG00000020686)
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Prairie vole	MODERN SPECIES	88	Drd5 (ENSMOCG00000005761)	Otop1 (ENSMOCG00000005736) #7	Tmem128 (ENSMOCG00000009182) #8	ENSMOCG00000018827 #9	Zbtb49 (ENSMOCG00000020948) #10	Nsg1 (ENSMOCG00000001080) #11	Stx18 (ENSMOCG00000008007) #12	Msx1 (ENSMOCG00000015741) #14	Cytl1 (ENSMOCG00000002340) #15	Stk32b (ENSMOCG00000002651) #16	Evc2 (ENSMOCG00000005869) #17	Evc (ENSMOCG00000014503) #18	Crmp1 (ENSMOCG00000001460) #19	Gm1043 (ENSMOCG00000022856) #20	Jakmip1 (ENSMOCG00000000764) #21	Wfs1 (ENSMOCG00000021244) #22	Ppp2r2c (ENSMOCG00000019489) #23	Man2b2 (ENSMOCG00000019526) #24	Mrfap1 (ENSMOCG00000013388) #25	Bloc1s4 (ENSMOCG00000004103) #30	D5Ertd579e (ENSMOCG00000020581) #31	Tbc1d14 (ENSMOCG00000017556) #32	Tada2b (ENSMOCG00000000385) #34	Grpel1 (ENSMOCG00000015614) #35	Sorcs2 (ENSMOCG00000012048) #37	Afap1 (ENSMOCG00000015747)	Ablim2 (ENSMOCG00000002107)	Sh3tc1 (ENSMOCG00000019986)	Htra3 (ENSMOCG00000014875)	Acox3 (ENSMOCG00000005263)	Trmt44 (ENSMOCG00000017807)
Northern American deer mouse	MODERN SPECIES	1	Drd5 (ENSPEMG00000006329)	Otop1 (ENSPEMG00000017345) #7	Tmem128 (ENSPEMG00000010738) #8	Lyar (ENSPEMG00000006969) #9	Zbtb49 (ENSPEMG00000014043) #10	Nsg1 (ENSPEMG00000015199) #11	Stx18 (ENSPEMG00000015723) #12	Msx1 (ENSPEMG00000030584) #14	Cytl1 (ENSPEMG00000014901) #15	Stk32b (ENSPEMG00000017412) #16	Evc2 (ENSPEMG00000014872) #17	Evc (ENSPEMG00000004270) #18	Crmp1 (ENSPEMG00000016797) #19	Gm1043 (ENSPEMG00000016478) #20	Jakmip1 (ENSPEMG00000016344) #21	Wfs1 (ENSPEMG00000004831) #22	Ppp2r2c (ENSPEMG00000018216) #23	Man2b2 (ENSPEMG00000011183) #24	Mrfap1 (ENSPEMG00000017209) #25	Bloc1s4 (ENSPEMG00000006436) #30	D5Ertd579e (ENSPEMG00000009021) #31	Tbc1d14 (ENSPEMG00000001163) #32	Ccdc96 (ENSPEMG00000011040) #33	Tada2b (ENSPEMG00000010787) #34	Grpel1 (ENSPEMG00000029107) #35	Psapl1 (ENSPEMG00000030506) #36	Sorcs2 (ENSPEMG00000016677) #37	Afap1 (ENSPEMG00000019260)	Ablim2 (ENSPEMG00000015528)	Sh3tc1 (ENSPEMG00000015098)	Htra3 (ENSPEMG00000009866)
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Mus	ANCESTRAL SPECIES	14	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Steppe mouse	MODERN SPECIES	2990	Tmem128 (ENSMSIG00000025692) #8	Lyar (ENSMSIG00000025639) #9	Zbtb49 (ENSMSIG00000025615) #10	Nsg1 (ENSMSIG00000025606) #11	Stx18 (ENSMSIG00000025536) #12	Msx1 (ENSMSIG00000025490) #14	ENSMSIG00000025482	ENSMSIG00000025459 #15	ENSMSIG00000025454	Stk32b (ENSMSIG00000025444) #16	Evc2 (ENSMSIG00000025349) #17	Evc (ENSMSIG00000025200) #18	Crmp1 (ENSMSIG00000025123) #19	Gm1043 (ENSMSIG00000025118) #20	Jakmip1 (ENSMSIG00000025016) #21	Wfs1 (ENSMSIG00000024996) #22	Ppp2r2c (ENSMSIG00000024982) #23	Man2b2 (ENSMSIG00000024942) #24	Mrfap1 (ENSMSIG00000024931) #25	Bloc1s4 (ENSMSIG00000024927) #30	ENSMSIG00000024921	ENSMSIG00000024912 #31
spretus	MODERN SPECIES	14	Drd5 (MGP_SPRETEiJ_G0028177)	Otop1 (MGP_SPRETEiJ_G0028176) #7	Tmem128 (MGP_SPRETEiJ_G0028175) #8	Lyar (MGP_SPRETEiJ_G0028174) #9	Zbtb49 (MGP_SPRETEiJ_G0028173) #10	Nsg1 (MGP_SPRETEiJ_G0028172) #11	Stx18 (MGP_SPRETEiJ_G0028171) #12	Msx1 (MGP_SPRETEiJ_G0028170) #14	MGP_SPRETEiJ_G0028169	Cytl1 (MGP_SPRETEiJ_G0028168) #15	Stk32b (MGP_SPRETEiJ_G0028167) #16	Evc2 (MGP_SPRETEiJ_G0028166) #17	Evc (MGP_SPRETEiJ_G0028165) #18	Crmp1 (MGP_SPRETEiJ_G0028164) #19	Jakmip1 (MGP_SPRETEiJ_G0028163) #21	Wfs1 (MGP_SPRETEiJ_G0028162) #22	Ppp2r2c (MGP_SPRETEiJ_G0028161) #23	Man2b2 (MGP_SPRETEiJ_G0028160) #24	MGP_SPRETEiJ_G0028159 #25	MGP_SPRETEiJ_G0028158 #25	Bloc1s4 (MGP_SPRETEiJ_G0028157) #30	D5Ertd579e (MGP_SPRETEiJ_G0028156) #31	Tbc1d14 (MGP_SPRETEiJ_G0028155) #32	Ccdc96 (MGP_SPRETEiJ_G0028154) #33	Tada2b (MGP_SPRETEiJ_G0028153) #34	Grpel1 (MGP_SPRETEiJ_G0028152) #35	Psapl1 (MGP_SPRETEiJ_G0028151) #36	Sorcs2 (MGP_SPRETEiJ_G0028150) #37	Afap1 (MGP_SPRETEiJ_G0028149)	Ablim2 (MGP_SPRETEiJ_G0028148)	Sh3tc1 (MGP_SPRETEiJ_G0028147)
Mouse	MODERN SPECIES	14	Otop1 (ENSMUSG00000051596) #7	Tmem128 (ENSMUSG00000067365) #8	Lyar (ENSMUSG00000067367) #9	Zbtb49 (ENSMUSG00000029127) #10	Nsg1 (ENSMUSG00000029126) #11	Stx18 (ENSMUSG00000029125) #12	Msx1 (ENSMUSG00000048450) #14	Cytl1 (ENSMUSG00000062329) #15	Stk32b (ENSMUSG00000029123) #16	Evc2 (ENSMUSG00000050248) #17	Evc (ENSMUSG00000029122) #18	Crmp1 (ENSMUSG00000029121) #19	Gm55746 (ENSMUSG00000113373)	Gm1043 (ENSMUSG00000117286) #20	Jakmip1 (ENSMUSG00000063646) #21	Wfs1 (ENSMUSG00000039474) #22	Ppp2r2c (ENSMUSG00000029120) #23	Man2b2 (ENSMUSG00000029119) #24	Mrfap1 (ENSMUSG00000055302) #25	Bloc1s4 (ENSMUSG00000060708) #30	D5Ertd579e (ENSMUSG00000029190) #31	Tbc1d14 (ENSMUSG00000029192) #32	Ccdc96 (ENSMUSG00000050677) #33	Tada2b (ENSMUSG00000029196) #34	Grpel1 (ENSMUSG00000029198) #35	Psapl1 (ENSMUSG00000043430) #36	Sorcs2 (ENSMUSG00000029093) #37	Afap1 (ENSMUSG00000029094)	Ablim2 (ENSMUSG00000029095)	Sh3tc1 (ENSMUSG00000036553)	Htra3 (ENSMUSG00000029096)
Ryukyu mouse	MODERN SPECIES	14	Slc2a9 (MGP_CAROLIEiJ_G0027181)	Drd5 (MGP_CAROLIEiJ_G0027180)	Otop1 (MGP_CAROLIEiJ_G0027179) #7	Tmem128 (MGP_CAROLIEiJ_G0027178) #8	Lyar (MGP_CAROLIEiJ_G0027177) #9	Zbtb49 (MGP_CAROLIEiJ_G0027176) #10	Nsg1 (MGP_CAROLIEiJ_G0027175) #11	Stx18 (MGP_CAROLIEiJ_G0027174) #12	Msx1 (MGP_CAROLIEiJ_G0027173) #14	Cytl1 (MGP_CAROLIEiJ_G0027172) #15	Stk32b (MGP_CAROLIEiJ_G0027171) #16	Evc2 (MGP_CAROLIEiJ_G0027170) #17	Evc (MGP_CAROLIEiJ_G0027169) #18	Crmp1 (MGP_CAROLIEiJ_G0027168) #19	Jakmip1 (MGP_CAROLIEiJ_G0027167) #21	Wfs1 (MGP_CAROLIEiJ_G0027166) #22	Ppp2r2c (MGP_CAROLIEiJ_G0027165) #23	Man2b2 (MGP_CAROLIEiJ_G0027164) #24	MGP_CAROLIEiJ_G0027163 #25	MGP_CAROLIEiJ_G0027162 #25	Bloc1s4 (MGP_CAROLIEiJ_G0027161) #30	D5Ertd579e (MGP_CAROLIEiJ_G0027160) #31	Tbc1d14 (MGP_CAROLIEiJ_G0027159) #32	Ccdc96 (MGP_CAROLIEiJ_G0027158) #33	Tada2b (MGP_CAROLIEiJ_G0027157) #34	Grpel1 (MGP_CAROLIEiJ_G0027156) #35	Psapl1 (MGP_CAROLIEiJ_G0027155) #36	Sorcs2 (MGP_CAROLIEiJ_G0027154) #37	Afap1 (MGP_CAROLIEiJ_G0027153)	Ablim2 (MGP_CAROLIEiJ_G0027152)	Sh3tc1 (MGP_CAROLIEiJ_G0027151)
Shrew mouse	MODERN SPECIES	4	Slc2a9 (MGP_PahariEiJ_G0016965)	Drd5 (MGP_PahariEiJ_G0016964)	Otop1 (MGP_PahariEiJ_G0016963) #7	Tmem128 (MGP_PahariEiJ_G0016962) #8	Lyar (MGP_PahariEiJ_G0016961) #9	Zbtb49 (MGP_PahariEiJ_G0016960) #10	Nsg1 (MGP_PahariEiJ_G0016959) #11	Stx18 (MGP_PahariEiJ_G0016958) #12	Msx1 (MGP_PahariEiJ_G0016957) #14	Cytl1 (MGP_PahariEiJ_G0016956) #15	Stk32b (MGP_PahariEiJ_G0016955) #16	Evc2 (MGP_PahariEiJ_G0016954) #17	Evc (MGP_PahariEiJ_G0016953) #18	Crmp1 (MGP_PahariEiJ_G0016952) #19	Jakmip1 (MGP_PahariEiJ_G0016951) #21	Wfs1 (MGP_PahariEiJ_G0016950) #22	Ppp2r2c (MGP_PahariEiJ_G0016949) #23	Man2b2 (MGP_PahariEiJ_G0016948) #24	MGP_PahariEiJ_G0016947 #25	MGP_PahariEiJ_G0016946 #25	Bloc1s4 (MGP_PahariEiJ_G0016945) #30	D5Ertd579e (MGP_PahariEiJ_G0016944) #31	Tbc1d14 (MGP_PahariEiJ_G0016943) #32	Ccdc96 (MGP_PahariEiJ_G0016942) #33	Tada2b (MGP_PahariEiJ_G0016941) #34	Grpel1 (MGP_PahariEiJ_G0016940) #35	Psapl1 (MGP_PahariEiJ_G0016939) #36	Sorcs2 (MGP_PahariEiJ_G0016938) #37	Afap1 (MGP_PahariEiJ_G0016937)	Ablim2 (MGP_PahariEiJ_G0016936)	Sh3tc1 (MGP_PahariEiJ_G0016935)
Rat	MODERN SPECIES	5	Slc2a9 (ENSRNOG00000005302)	Drd5 (ENSRNOG00000005338)	Otop1 (ENSRNOG00000028423) #7	Tmem128 (ENSRNOG00000005346) #8	Lyar (ENSRNOG00000005374) #9	Zbtb49 (ENSRNOG00000005633) #10	Nsg1 (ENSRNOG00000005700) #11	Stx18 (ENSRNOG00000006139) #12	Cytl1 (ENSRNOG00000028108) #15	Stk32b (ENSRNOG00000031397) #16	Evc2 (ENSRNOG00000007025) #17	Evc (ENSRNOG00000007564) #18	Crmp1 (ENSRNOG00000004781) #19	C14h4orf50 (ENSRNOG00000038427) #20	Jakmip1 (ENSRNOG00000004998) #21	Wfs1 (ENSRNOG00000005108) #22	Ppp2r2c (ENSRNOG00000058202) #23	Man2b2 (ENSRNOG00000056162) #24	ENSRNOG00000068182	Bloc1s4 (ENSRNOG00000054224) #30	LOC680039 (ENSRNOG00000027623) #31	Tbc1d14 (ENSRNOG00000006400) #32	ENSRNOG00000062938	Ccdc96 (ENSRNOG00000006575) #33	Tada2b (ENSRNOG00000027326) #34	Grpel1 (ENSRNOG00000006593) #35	ENSRNOG00000070648	Sorcs2 (ENSRNOG00000007033) #37	Psapl1 (ENSRNOG00000006845) #36	Afap1 (ENSRNOG00000060665)	Ablim2 (ENSRNOG00000007882)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1670													Crmp1 (ENSNGAG00000007363) #19	Gm1043 (ENSNGAG00000009300) #20	Jakmip1 (ENSNGAG00000000247) #21	Wfs1 (ENSNGAG00000016864) #22	Ppp2r2c (ENSNGAG00000000226) #23	Man2b2 (ENSNGAG00000008502) #24	Mrfap1 (ENSNGAG00000011747) #25	Bloc1s4 (ENSNGAG00000013827) #30	D5Ertd579e (ENSNGAG00000013949) #31	Tbc1d14 (ENSNGAG00000018491) #32	Tada2b (ENSNGAG00000000785) #34	ENSNGAG00000013393 #35
Lesser Egyptian jerboa	MODERN SPECIES	178	Jakmip1 (ENSJJAG00000008427) #21	Crmp1 (ENSJJAG00000000054) #19	Evc (ENSJJAG00000017287) #18	Evc2 (ENSJJAG00000015517) #17	Stk32b (ENSJJAG00000012329) #16	Cytl1 (ENSJJAG00000020976) #15	Msx1 (ENSJJAG00000019602) #14	ENSJJAG00000018737	Stx18 (ENSJJAG00000017854) #12	Nsg1 (ENSJJAG00000016805) #11	ENSJJAG00000016460	ENSJJAG00000015468 #10	ENSJJAG00000014925 #9	Tmem128 (ENSJJAG00000014554) #8	Otop1 (ENSJJAG00000019947) #7	Wfs1 (ENSJJAG00000018904) #22	Ppp2r2c (ENSJJAG00000016987) #23	ENSJJAG00000016582	ENSJJAG00000016417	ENSJJAG00000015540	Bloc1s3 (ENSJJAG00000012549)	Slc2a9 (ENSJJAG00000012420)	Wdr1 (ENSJJAG00000004749)	Hs3st1 (ENSJJAG00000012681)	ENSJJAG00000001096	ENSJJAG00000000099
Kangaroo rat	MODERN SPECIES	390	Tmem128 (ENSDORG00000030091) #8	ENSDORG00000006012 #9	ENSDORG00000026340 #10	ENSDORG00000028511 #10	Nsg1 (ENSDORG00000025811) #11	Stx18 (ENSDORG00000013927) #12	Msx1 (ENSDORG00000011378) #14	Cytl1 (ENSDORG00000011380) #15	Stk32b (ENSDORG00000001714) #16	Evc2 (ENSDORG00000013950) #17	Evc (ENSDORG00000008832) #18	Crmp1 (ENSDORG00000005781) #19	ENSDORG00000024833 #21	ENSDORG00000011737 #21	ENSDORG00000024252 #21	Wfs1 (ENSDORG00000012589) #22	Ppp2r2c (ENSDORG00000015756) #23	Man2b2 (ENSDORG00000016448) #24	D5Ertd579e (ENSDORG00000029162) #31	Tbc1d14 (ENSDORG00000000773) #32	ENSDORG00000026965 #33	Tada2b (ENSDORG00000029869) #34	Grpel1 (ENSDORG00000016660) #35	Sorcs2 (ENSDORG00000027668) #37	Afap1 (ENSDORG00000006803)	Ablim2 (ENSDORG00000012609)	Sh3tc1 (ENSDORG00000007236)	Htra3 (ENSDORG00000002142)	Acox3 (ENSDORG00000015374)	Trmt44 (ENSDORG00000006411)	Cpz (ENSDORG00000009339)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Naked mole-rat female	MODERN SPECIES	1	LYAR (ENSHGLG00000039937) #9	ZBTB49 (ENSHGLG00000046826) #10	NSG1 (ENSHGLG00000014668) #11	STX18 (ENSHGLG00000004074) #12	ENSHGLG00000032792	MSX1 (ENSHGLG00000004181) #14	CYTL1 (ENSHGLG00000043228) #15	STK32B (ENSHGLG00000004329) #16	EVC2 (ENSHGLG00000004386) #17	ENSHGLG00000046624	EVC (ENSHGLG00000004462) #18	CRMP1 (ENSHGLG00000004859) #19	ENSHGLG00000041518 #20	JAKMIP1 (ENSHGLG00000005253) #21	ENSHGLG00000049306	WFS1 (ENSHGLG00000005950) #22	PPP2R2C (ENSHGLG00000050574) #23	MAN2B2 (ENSHGLG00000006658) #24	ENSHGLG00000007042 #25	ENSHGLG00000007372 #28	BLOC1S4 (ENSHGLG00000046522) #30	KIAA0232 (ENSHGLG00000008045) #31	TBC1D14 (ENSHGLG00000008360) #32	ENSHGLG00000035793 #33	TADA2B (ENSHGLG00000040286) #34	GRPEL1 (ENSHGLG00000044024) #35	SORCS2 (ENSHGLG00000014243) #37	PSAPL1 (ENSHGLG00000042113) #36	AFAP1 (ENSHGLG00000014284)	ABLIM2 (ENSHGLG00000014370)	SH3TC1 (ENSHGLG00000014578)
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000159192	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Hystricomorpha_b	ANCESTRAL SPECIES	37	ENSGT00940000159192	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Long-tailed chinchilla	MODERN SPECIES	221		SLC2A9 (ENSCLAG00000009235)	OTOP1 (ENSCLAG00000007359) #7	TMEM128 (ENSCLAG00000008867) #8	LYAR (ENSCLAG00000013997) #9	ZBTB49 (ENSCLAG00000014857) #10	NSG1 (ENSCLAG00000015378) #11	STX18 (ENSCLAG00000014826) #12	MSX1 (ENSCLAG00000012718) #14	CYTL1 (ENSCLAG00000012278) #15	STK32B (ENSCLAG00000011002) #16	EVC2 (ENSCLAG00000010171) #17	EVC (ENSCLAG00000015926) #18	CRMP1 (ENSCLAG00000007378) #19	JAKMIP1 (ENSCLAG00000010363) #21	WFS1 (ENSCLAG00000011130) #22	PPP2R2C (ENSCLAG00000011596) #23	MAN2B2 (ENSCLAG00000012883) #24	ENSCLAG00000008626	KIAA0232 (ENSCLAG00000007238) #31	TBC1D14 (ENSCLAG00000009594) #32	TADA2B (ENSCLAG00000014444) #34	GRPEL1 (ENSCLAG00000014866) #35	PSAPL1 (ENSCLAG00000018086) #36	SORCS2 (ENSCLAG00000008556) #37	AFAP1 (ENSCLAG00000011637)	ABLIM2 (ENSCLAG00000008762)	SH3TC1 (ENSCLAG00000007496)	HTRA3 (ENSCLAG00000007335)	ACOX3 (ENSCLAG00000009133)	TRMT44 (ENSCLAG00000008063)
Degu	MODERN SPECIES	47	ZBTB49 (ENSODEG00000010729) #10	NSG1 (ENSODEG00000009246) #11	STX18 (ENSODEG00000010096) #12	MSX1 (ENSODEG00000009346) #14	ENSODEG00000009744	CYTL1 (ENSODEG00000009597) #15	ENSODEG00000008457	STK32B (ENSODEG00000009197) #16	ENSODEG00000009511	ENSODEG00000008718	ENSODEG00000009080	EVC2 (ENSODEG00000010011) #17	EVC (ENSODEG00000008913) #18	CRMP1 (ENSODEG00000009439) #19	JAKMIP1 (ENSODEG00000010138) #21	WFS1 (ENSODEG00000012808) #22	PPP2R2C (ENSODEG00000011119) #23	MAN2B2 (ENSODEG00000010318) #24	ENSODEG00000013573 #25	KIAA0232 (ENSODEG00000009378) #31	ENSODEG00000010053 #32	ENSODEG00000009069 #33	TADA2B (ENSODEG00000009529) #34	GRPEL1 (ENSODEG00000009579) #35	SORCS2 (ENSODEG00000010208) #37	AFAP1 (ENSODEG00000009173)	ABLIM2 (ENSODEG00000009883)	SH3TC1 (ENSODEG00000010846)	HTRA3 (ENSODEG00000010864)	ACOX3 (ENSODEG00000009811)	TRMT44 (ENSODEG00000009730)
Guinea pig	MODERN SPECIES	85	SLC2A9 (ENSCPOG00000004864)	DRD5 (ENSCPOG00000007877)	OTOP1 (ENSCPOG00000022370) #7	TMEM128 (ENSCPOG00000003922) #8	ENSCPOG00000003923 #9	ZBTB49 (ENSCPOG00000007981) #10	NSG1 (ENSCPOG00000023088) #11	STX18 (ENSCPOG00000020979) #12	MSX1 (ENSCPOG00000037586) #14	CYTL1 (ENSCPOG00000008239) #15	STK32B (ENSCPOG00000010026) #16	EVC2 (ENSCPOG00000009598) #17	EVC (ENSCPOG00000009612) #18	CRMP1 (ENSCPOG00000009625) #19	JAKMIP1 (ENSCPOG00000011575) #21	WFS1 (ENSCPOG00000022170) #22	PPP2R2C (ENSCPOG00000039706) #23
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Marmotini	ANCESTRAL SPECIES	26	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Marmotini_b	ANCESTRAL SPECIES	33	ENSGT00940000159192	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Arctic ground squirrel	MODERN SPECIES	154								MSX1 (ENSUPAG00010003547) #14	CYTL1 (ENSUPAG00010003553) #15	STK32B (ENSUPAG00010003559) #16	EVC2 (ENSUPAG00010003571) #17	EVC (ENSUPAG00010003589) #18	CRMP1 (ENSUPAG00010004062) #19	JAKMIP1 (ENSUPAG00010004172) #21	ENSUPAG00010004337	WFS1 (ENSUPAG00010004345) #22	PPP2R2C (ENSUPAG00010004357) #23	MAN2B2 (ENSUPAG00010004375) #24	S100P (ENSUPAG00010004392) #28	BLOC1S4 (ENSUPAG00010004395) #30	KIAA0232 (ENSUPAG00010004399) #31	TBC1D14 (ENSUPAG00010004452) #32	ENSUPAG00010004558	ENSUPAG00010004564 #33	TADA2B (ENSUPAG00010004566) #34	GRPEL1 (ENSUPAG00010004575) #35	SORCS2 (ENSUPAG00010004579) #37	PSAPL1 (ENSUPAG00010004619) #36	AFAP1 (ENSUPAG00010004645)	ABLIM2 (ENSUPAG00010004675)	SH3TC1 (ENSUPAG00010005003)
Squirrel	MODERN SPECIES	77	DRD5 (ENSSTOG00000024357)	OTOP1 (ENSSTOG00000025465) #7	TMEM128 (ENSSTOG00000000546) #8	ENSSTOG00000000548 #9	ZBTB49 (ENSSTOG00000000550) #10	NSG1 (ENSSTOG00000014987) #11	STX18 (ENSSTOG00000014992) #12	MSX1 (ENSSTOG00000020201) #14	CYTL1 (ENSSTOG00000000183) #15	STK32B (ENSSTOG00000004994) #16	EVC2 (ENSSTOG00000008460) #17	EVC (ENSSTOG00000022307) #18	CRMP1 (ENSSTOG00000008899) #19	JAKMIP1 (ENSSTOG00000009209) #21	ENSSTOG00000029807	WFS1 (ENSSTOG00000021858) #22	PPP2R2C (ENSSTOG00000011959) #23	MAN2B2 (ENSSTOG00000003905) #24	S100P (ENSSTOG00000003753) #28	ENSSTOG00000024126 #25	BLOC1S4 (ENSSTOG00000015106) #30	KIAA0232 (ENSSTOG00000015114) #31	TBC1D14 (ENSSTOG00000028274) #32	ENSSTOG00000027035 #34	GRPEL1 (ENSSTOG00000009782) #35	SORCS2 (ENSSTOG00000021488) #37	AFAP1 (ENSSTOG00000023755)	ABLIM2 (ENSSTOG00000024265)	SH3TC1 (ENSSTOG00000020377)	HTRA3 (ENSSTOG00000021150)	ACOX3 (ENSSTOG00000016342)
Alpin marmot	MODERN SPECIES	9	SLC2A9 (ENSMMMG00000015685)	DRD5 (ENSMMMG00000015673)	TMEM128 (ENSMMMG00000015670) #8	LYAR (ENSMMMG00000015661) #9	ZBTB49 (ENSMMMG00000015640) #10	NSG1 (ENSMMMG00000015615) #11	STX18 (ENSMMMG00000015577) #12	MSX1 (ENSMMMG00000015570) #14	CYTL1 (ENSMMMG00000015556) #15	STK32B (ENSMMMG00000015543) #16	EVC2 (ENSMMMG00000015516) #17	EVC (ENSMMMG00000015313) #18	CRMP1 (ENSMMMG00000015284) #19	ENSMMMG00000015267 #20	JAKMIP1 (ENSMMMG00000015150) #21	WFS1 (ENSMMMG00000015123) #22	PPP2R2C (ENSMMMG00000015117) #23	MAN2B2 (ENSMMMG00000015106) #24	S100P (ENSMMMG00000015105) #28	ENSMMMG00000015103 #25	BLOC1S4 (ENSMMMG00000015101) #30	KIAA0232 (ENSMMMG00000015088) #31	TBC1D14 (ENSMMMG00000015012) #32	ENSMMMG00000015006 #33	TADA2B (ENSMMMG00000015003) #34	GRPEL1 (ENSMMMG00000014999) #35	SORCS2 (ENSMMMG00000014836) #37	AFAP1 (ENSMMMG00000014805)	ABLIM2 (ENSMMMG00000014483)	SH3TC1 (ENSMMMG00000014397)	HTRA3 (ENSMMMG00000014366)
Eurasian red squirrel	MODERN SPECIES	18	OTOP1 (ENSSVLG00005007557) #7	TMEM128 (ENSSVLG00005007596) #8	LYAR (ENSSVLG00005007623) #9	ZBTB49 (ENSSVLG00005007648) #10	NSG1 (ENSSVLG00005007685) #11	STX18 (ENSSVLG00005007739) #12	MSX1 (ENSSVLG00005007827) #14	ENSSVLG00005007871 #15	ENSSVLG00005007931 #15	STK32B (ENSSVLG00005007977) #16	EVC2 (ENSSVLG00005008072) #17	EVC (ENSSVLG00005008315) #18	CRMP1 (ENSSVLG00005008502) #19	ENSSVLG00005008731 #20	JAKMIP1 (ENSSVLG00005008863) #21	WFS1 (ENSSVLG00005009346) #22	PPP2R2C (ENSSVLG00005009372) #23	MAN2B2 (ENSSVLG00005009508) #24	ENSSVLG00005009547 #25	S100P (ENSSVLG00005009565) #28	ENSSVLG00005009589 #25	BLOC1S4 (ENSSVLG00005009606) #30	KIAA0232 (ENSSVLG00005009626) #31	ENSSVLG00005009687	TBC1D14 (ENSSVLG00005009746) #32	ENSSVLG00005009953 #33	TADA2B (ENSSVLG00005009970) #34	ENSSVLG00005010011 #35	ENSSVLG00005010062	SORCS2 (ENSSVLG00005010100) #37	PSAPL1 (ENSSVLG00005010373) #36
Lagomorpha	ANCESTRAL SPECIES	539																ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23
Pika	MODERN SPECIES	167																WFS1 (ENSOPRG00000003929) #22	ENSOPRG00000003944 #23
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a
Megabat	MODERN SPECIES	3968																WFS1 (ENSPVAG00000011527) #22	PPP2R2C (ENSPVAG00000011528) #23	ENSPVAG00000011529 #25
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.A #29	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a
Greater horseshoe bat	MODERN SPECIES	23	TMEM128 (ENSRFEG00010004467) #8	LYAR (ENSRFEG00010004484) #9	ZBTB49 (ENSRFEG00010004501) #10	NSG1 (ENSRFEG00010004523) #11	STX18 (ENSRFEG00010004547) #12	MSX1 (ENSRFEG00010004558) #14	CYTL1 (ENSRFEG00010004572) #15	STK32B (ENSRFEG00010004594) #16	EVC2 (ENSRFEG00010004635) #17	EVC (ENSRFEG00010004655) #18	CRMP1 (ENSRFEG00010005266) #19	ENSRFEG00010005291	ENSRFEG00010005301 #20	JAKMIP1 (ENSRFEG00010005350) #21	ENSRFEG00010005445	WFS1 (ENSRFEG00010005481) #22	PPP2R2C (ENSRFEG00010005525) #23	ENSRFEG00010005566 #25	ENSRFEG00010005580 #27	S100P (ENSRFEG00010005592) #28	MRFAP1L1 (ENSRFEG00010005604) #29	BLOC1S4 (ENSRFEG00010005617) #30	KIAA0232 (ENSRFEG00010005655) #31	TBC1D14 (ENSRFEG00010005763) #32	ENSRFEG00010005879 #33	TADA2B (ENSRFEG00010005900) #34	GRPEL1 (ENSRFEG00010005941) #35	SORCS2 (ENSRFEG00010006085) #37	PSAPL1 (ENSRFEG00010006259) #36	AFAP1 (ENSRFEG00010006280)	ABLIM2 (ENSRFEG00010006470)
Equus	ANCESTRAL SPECIES	12	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C.z #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00940000155541.C.y #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a
Horse	MODERN SPECIES	22	TMEM128 (ENSECAG00000012014) #8	LYAR (ENSECAG00000012794) #9	ZBTB49 (ENSECAG00000013694) #10	ENSECAG00000050935 #10	NSG1 (ENSECAG00000015566) #11	STX18 (ENSECAG00000015983) #12	MSX1 (ENSECAG00000020619) #14	CYTL1 (ENSECAG00000020830) #15	STK32B (ENSECAG00000021668) #16	EVC2 (ENSECAG00000021897) #17	EVC (ENSECAG00000006416) #18	CRMP1 (ENSECAG00000010229) #19	C3H4orf50 (ENSECAG00000022828)	JAKMIP1 (ENSECAG00000022869) #21	ENSECAG00000043260	WFS1 (ENSECAG00000013126) #22	PPP2R2C (ENSECAG00000013951) #23	MAN2B2 (ENSECAG00000019297) #24	ENSECAG00000058216 #27	S100P (ENSECAG00000023992) #28	ENSECAG00000002649 #25	BLOC1S4 (ENSECAG00000003954) #30	KIAA0232 (ENSECAG00000024031) #31	CCDC96 (ENSECAG00000009372) #33	TADA2B (ENSECAG00000009381) #34	GRPEL1 (ENSECAG00000009669) #35	SORCS2 (ENSECAG00000009779) #37	PSAPL1 (ENSECAG00000013584) #36	AFAP1 (ENSECAG00000013779)	ABLIM2 (ENSECAG00000016485)	SH3TC1 (ENSECAG00000020879)
Donkey	MODERN SPECIES	22	DRD5 (ENSEASG00005005315)	ENSEASG00005005313 #7	ENSEASG00005005312 #8	LYAR (ENSEASG00005005311) #9	ZBTB49 (ENSEASG00005005309) #10	NSG1 (ENSEASG00005023804) #11	STX18 (ENSEASG00005005299) #12	MSX1 (ENSEASG00005005296) #14	ENSEASG00005037071	STK32B (ENSEASG00005005283) #16	EVC2 (ENSEASG00005005274) #17	EVC (ENSEASG00005005247) #18	CRMP1 (ENSEASG00005005224) #19	C4orf50 (ENSEASG00005005217) #20	JAKMIP1 (ENSEASG00005005214) #21	WFS1 (ENSEASG00005028772) #22	PPP2R2C (ENSEASG00005005206) #23	ENSEASG00005005202 #24	ENSEASG00005032923 #25	ENSEASG00005005194 #27	ENSEASG00005034544 #27	ENSEASG00005031306 #28	ENSEASG00005031347 #25	BLOC1S4 (ENSEASG00005005186) #30	KIAA0232 (ENSEASG00005005182) #31	TBC1D14 (ENSEASG00005005175) #32	ENSEASG00005005171 #33	TADA2B (ENSEASG00005034952) #34	GRPEL1 (ENSEASG00005036452) #35	SORCS2 (ENSEASG00005005144) #37	PSAPL1 (ENSEASG00005038318) #36
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Ursidae	ANCESTRAL SPECIES	29	ENSGT00390000003477 #9	ENSGT00940000158750.t #10	ENSGT00940000172520	ENSGT00940000158750.s #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Ursus	ANCESTRAL SPECIES	136	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750.t #10	ENSGT00940000172520	ENSGT00940000158750.s #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000161213	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24
American black bear	MODERN SPECIES	1079													ENSUAMG00000022663 #20	JAKMIP1 (ENSUAMG00000022635) #21	ENSUAMG00000022622	WFS1 (ENSUAMG00000022617) #22
Polar bear	MODERN SPECIES	127	DRD5 (ENSUMAG00000000366)	TMEM128 (ENSUMAG00000000346) #8	LYAR (ENSUMAG00000000338) #9	ENSUMAG00000000326 #10	ENSUMAG00000000295	ENSUMAG00000000249	STX18 (ENSUMAG00000000239) #12	CYTL1 (ENSUMAG00000000052) #15	STK32B (ENSUMAG00000023066) #16	EVC2 (ENSUMAG00000023028) #17	EVC (ENSUMAG00000022996) #18	CRMP1 (ENSUMAG00000022987) #19	ENSUMAG00000022986 #20	JAKMIP1 (ENSUMAG00000022960) #21	ENSUMAG00000022951	WFS1 (ENSUMAG00000022949) #22	PPP2R2C (ENSUMAG00000022937) #23	MAN2B2 (ENSUMAG00000022900) #24
Giant Panda	MODERN SPECIES	2	ENSAMEG00000013648 #7	ENSAMEG00000013656 #8	ENSAMEG00000013658 #9	ZBTB49 (ENSAMEG00000013670) #10	NSG1 (ENSAMEG00000013679) #11	STX18 (ENSAMEG00000013685) #12	MSX1 (ENSAMEG00000023843) #14	CYTL1 (ENSAMEG00000027051) #15	STK32B (ENSAMEG00000011168) #16	EVC2 (ENSAMEG00000011143) #17	EVC (ENSAMEG00000011133) #18	CRMP1 (ENSAMEG00000011012) #19	ENSAMEG00000023744	JAKMIP1 (ENSAMEG00000010950) #21	ENSAMEG00000026053	WFS1 (ENSAMEG00000010926) #22	PPP2R2C (ENSAMEG00000010920) #23	ENSAMEG00000020044 #25	ENSAMEG00000028799 #27	S100P (ENSAMEG00000008381) #28	ENSAMEG00000023739 #25	BLOC1S4 (ENSAMEG00000008378) #30	KIAA0232 (ENSAMEG00000008363) #31	TBC1D14 (ENSAMEG00000008316) #32	ENSAMEG00000008315 #33	TADA2B (ENSAMEG00000008308) #34	GRPEL1 (ENSAMEG00000028793) #35	SORCS2 (ENSAMEG00000006150) #37	AFAP1 (ENSAMEG00000006201)	ABLIM2 (ENSAMEG00000015072)	SH3TC1 (ENSAMEG00000025685)
Mustelinae	ANCESTRAL SPECIES	69	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00940000162871 #28	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
American mink	MODERN SPECIES	547											EVC2 (ENSNVIG00000007811) #17	EVC (ENSNVIG00000007742) #18	CRMP1 (ENSNVIG00000007597) #19	ENSNVIG00000007569 #20	JAKMIP1 (ENSNVIG00000007346) #21	WFS1 (ENSNVIG00000007323) #22	PPP2R2C (ENSNVIG00000007300) #23	ENSNVIG00000007284 #24
Ferret	MODERN SPECIES	317	ENSMPUG00000007961 #10	NSG1 (ENSMPUG00000007955) #11	STX18 (ENSMPUG00000007952) #12	MSX1 (ENSMPUG00000007949) #14	ENSMPUG00000007945	CYTL1 (ENSMPUG00000007935) #15	STK32B (ENSMPUG00000007927) #16	EVC2 (ENSMPUG00000007920) #17	EVC (ENSMPUG00000007846) #18	ENSMPUG00000007841	CRMP1 (ENSMPUG00000007629) #19	ENSMPUG00000007623	ENSMPUG00000007618 #20	JAKMIP1 (ENSMPUG00000007396) #21	ENSMPUG00000007386	WFS1 (ENSMPUG00000007381) #22	PPP2R2C (ENSMPUG00000007366) #23	ENSMPUG00000007360	ENSMPUG00000007350 ##24	ENSMPUG00000007339	MAN2B2 (ENSMPUG00000007073) #24	ENSMPUG00000019799 #25	S100P (ENSMPUG00000007066) #28	ENSMPUG00000019797 #27
Canidae	ANCESTRAL SPECIES	51	ENSGT01050000247111	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041.p	ENSGT00940000159219	ENSGT00940000177939	ENSGT00940000157110	ENSGT00940000161360	ENSGT00950000185498	ENSGT00390000014963	ENSGT00390000008346	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a	ENSGT00390000016928 #22	ENSGT00940000157796	ENSGT00390000011314	ENSGT00550000074827	ENSGT00940000159270	ENSGT00940000158487	ENSGT00940000158708.b
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00940000160193	ENSGT01050000247111	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041.p	ENSGT00940000159219	ENSGT00940000157110	ENSGT00940000161360	ENSGT00390000014084.x.a	ENSGT00390000014963	ENSGT00390000008346	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a	ENSGT00390000016928 #22	ENSGT00940000157796	ENSGT00390000011314	ENSGT00550000074827	ENSGT00940000159270	ENSGT00940000158487	ENSGT00940000158708.b	ENSGT00390000000306	ENSGT00940000164787	ENSGT00940000163050	ENSGT00940000162306	ENSGT00940000163677.a.b.a.a.a.a.a.a	ENSGT00940000154712	ENSGT00940000153244.B	ENSGT00950000182890.C	ENSGT00940000154411.`b.i.f
Dingo	MODERN SPECIES	88							GRXCR1 (ENSCAFG00020021991)	ENSCAFG00020021985	ENSCAFG00020021971	SHISA3 (ENSCAFG00020021965)	ENSCAFG00020021961	SLC30A9 (ENSCAFG00020021444)	TMEM33 (ENSCAFG00020021399)	PHOX2B (ENSCAFG00020021393)	LIMCH1 (ENSCAFG00020021385)	WFS1 (ENSCAFG00020021379) #22	IREB2 (ENSCAFG00020021072)	HYKK (ENSCAFG00020021063)	ENSCAFG00020021060	CHRNA5 (ENSCAFG00020021054)	CHRNA3 (ENSCAFG00020021051)	CHRNB4 (ENSCAFG00020021049)	C8orf33 (ENSCAFG00020021047)	ENSCAFG00020021046	ZNF16 (ENSCAFG00020021044)	ZNF250 (ENSCAFG00020021041)	ZNF34 (ENSCAFG00020021035)	RPL8 (ENSCAFG00020021034)	ENSCAFG00020021031	ZNF7 (ENSCAFG00020021028)	COMMD5 (ENSCAFG00020021026)
Dog	MODERN SPECIES	4	ENSCAFG00845015556	GNPDA2 (ENSCAFG00845015497)	GUF1 (ENSCAFG00845015394)	YIPF7 (ENSCAFG00845015334)	ENSCAFG00845015310	KCTD8 (ENSCAFG00845015280)	GRXCR1 (ENSCAFG00845015179)	ATP8A1 (ENSCAFG00845014721)	SHISA3 (ENSCAFG00845014597)	ENSCAFG00845014573	BEND4 (ENSCAFG00845014543)	SLC30A9 (ENSCAFG00845014338)	TMEM33 (ENSCAFG00845014117)	ENSCAFG00845014079	LIMCH1 (ENSCAFG00845013654)	ENSCAFG00845013420 #22	IREB2 (ENSCAFG00845013296)	HYKK (ENSCAFG00845013245)	ENSCAFG00845013139	CHRNA5 (ENSCAFG00845013065)	CHRNA3 (ENSCAFG00845012908)	CHRNB4 (ENSCAFG00845012797)	ENSCAFG00845012622	ENSCAFG00845012514	ZNF252 (ENSCAFG00845012460)	ENSCAFG00845012433	ENSCAFG00845012309	ENSCAFG00845012223	ENSCAFG00845012193	RPL8 (ENSCAFG00845012138)	ENSCAFG00845012094
Red fox	MODERN SPECIES	216			ENSVVUG00000006091	ENSVVUG00000006097	GRXCR1 (ENSVVUG00000006109)	ENSVVUG00000006145	ENSVVUG00000006151	ATP8A1 (ENSVVUG00000006161)	SHISA3 (ENSVVUG00000006207)	ENSVVUG00000006211	BEND4 (ENSVVUG00000006213)	SLC30A9 (ENSVVUG00000006254)	TMEM33 (ENSVVUG00000007573)	ENSVVUG00000007581	LIMCH1 (ENSVVUG00000007602)	WFS1 (ENSVVUG00000007775) #22	IREB2 (ENSVVUG00000007811)	HYKK (ENSVVUG00000007847)	PSMA4 (ENSVVUG00000007853)	CHRNA5 (ENSVVUG00000007856)	CHRNA3 (ENSVVUG00000007873)	CHRNB4 (ENSVVUG00000007880)
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000167616	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00940000156391
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000167616	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000155541.C.w.a #25	ENSGT00940000162871 #28	ENSGT00940000155541.B #27	ENSGT00940000155541.C.w.b #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000167616.f	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000155541.B.c #27	ENSGT00940000155541.C.w.b #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
leopard	MODERN SPECIES	25	OTOP1 (ENSPPRG00000010545) #7	TMEM128 (ENSPPRG00000010372) #8	LYAR (ENSPPRG00000009782) #9	ZBTB49 (ENSPPRG00000009152) #10	NSG1 (ENSPPRG00000008462) #11	STX18 (ENSPPRG00000006631) #12	ENSPPRG00000017718	MSX1 (ENSPPRG00000003484) #14	CYTL1 (ENSPPRG00000002883) #15	STK32B (ENSPPRG00000002452) #16	EVC2 (ENSPPRG00000001189) #17	EVC (ENSPPRG00000000791) #18	CRMP1 (ENSPPRG00000023508) #19	ENSPPRG00000024476 #20	JAKMIP1 (ENSPPRG00000024637) #21	WFS1 (ENSPPRG00000012817) #22	PPP2R2C (ENSPPRG00000012126) #23	ENSPPRG00000017187 #27	S100P (ENSPPRG00000008483) #28	ENSPPRG00000017176 #25	BLOC1S4 (ENSPPRG00000017163) #30	KIAA0232 (ENSPPRG00000007996) #31	TBC1D14 (ENSPPRG00000007356) #32	ENSPPRG00000005104	ENSPPRG00000017005 #33	TADA2B (ENSPPRG00000004710) #34	GRPEL1 (ENSPPRG00000004353) #35	SORCS2 (ENSPPRG00000003995) #37	AFAP1 (ENSPPRG00000002919)	ABLIM2 (ENSPPRG00000019420)	SH3TC1 (ENSPPRG00000005952)
lion	MODERN SPECIES	4	OTOP1 (ENSPLOG00000000903) #7	TMEM128 (ENSPLOG00000000938) #8	LYAR (ENSPLOG00000000968) #9	ZBTB49 (ENSPLOG00000000997) #10	NSG1 (ENSPLOG00000001025) #11	STX18 (ENSPLOG00000001060) #12	ENSPLOG00000001090	MSX1 (ENSPLOG00000001106) #14	CYTL1 (ENSPLOG00000001119) #15	STK32B (ENSPLOG00000001160) #16	EVC2 (ENSPLOG00000001237) #17	EVC (ENSPLOG00000001343) #18	CRMP1 (ENSPLOG00000001438) #19	ENSPLOG00000001545 #20	JAKMIP1 (ENSPLOG00000001633) #21	WFS1 (ENSPLOG00000001709) #22	PPP2R2C (ENSPLOG00000001809) #23	ENSPLOG00000001852 #25	ENSPLOG00000001864 #27	ENSPLOG00000001878 #27	S100P (ENSPLOG00000001889) #28	ENSPLOG00000001900 #25	BLOC1S4 (ENSPLOG00000001909) #30	KIAA0232 (ENSPLOG00000001930) #31	TBC1D14 (ENSPLOG00000002050) #32	ENSPLOG00000002175 #33	TADA2B (ENSPLOG00000002191) #34	GRPEL1 (ENSPLOG00000002205) #35	AFAP1 (ENSPLOG00000002258)	ABLIM2 (ENSPLOG00000002684)	SH3TC1 (ENSPLOG00000003184)
Tiger	MODERN SPECIES	68	DRD5 (ENSPTIG00000001157)	OTOP1 (ENSPTIG00000019798) #7	TMEM128 (ENSPTIG00000020626) #8	LYAR (ENSPTIG00000020764) #9	ENSPTIG00000005893 #10	NSG1 (ENSPTIG00000006944) #11	STX18 (ENSPTIG00000007842) #12	ENSPTIG00000001489	CYTL1 (ENSPTIG00000009046) #15	STK32B (ENSPTIG00000009630) #16	EVC2 (ENSPTIG00000010487) #17	EVC (ENSPTIG00000011400) #18	CRMP1 (ENSPTIG00000012758) #19	ENSPTIG00000013627 #20	JAKMIP1 (ENSPTIG00000013914) #21	WFS1 (ENSPTIG00000015610) #22	PPP2R2C (ENSPTIG00000016012) #23	ENSPTIG00000002754 #25	BLOC1S4 (ENSPTIG00000002785) #30	KIAA0232 (ENSPTIG00000017817) #31	TBC1D14 (ENSPTIG00000020235) #32	ENSPTIG00000002658 #33	TADA2B (ENSPTIG00000005032) #34	GRPEL1 (ENSPTIG00000005227) #35	SORCS2 (ENSPTIG00000005430) #37	AFAP1 (ENSPTIG00000008059)	ENSPTIG00000010844	ACOX3 (ENSPTIG00000011467)	ENSPTIG00000013080	CPZ (ENSPTIG00000013611)	ENSPTIG00000015060
Cat	MODERN SPECIES	235	OTOP1 (ENSFCAG00000015506) #7	TMEM128 (ENSFCAG00000015507) #8	LYAR (ENSFCAG00000028343) #9	ZBTB49 (ENSFCAG00000015510) #10	STX18 (ENSFCAG00000015515) #12	NSG1 (ENSFCAG00000036342) #11	ENSFCAG00000036824	MSX1 (ENSFCAG00000046410) #14	CYTL1 (ENSFCAG00000006748) #15	STK32B (ENSFCAG00000004074) #16	EVC2 (ENSFCAG00000004075) #17	EVC (ENSFCAG00000004076) #18	CRMP1 (ENSFCAG00000004077) #19	C4orf50 (ENSFCAG00000004078) #20	JAKMIP1 (ENSFCAG00000004079) #21	WFS1 (ENSFCAG00000040449) #22	PPP2R2C (ENSFCAG00000006161) #23	ENSFCAG00000053431 #25	ENSFCAG00000043532 #27	ENSFCAG00000046639 #27	S100P (ENSFCAG00000044457) #28	ENSFCAG00000010023 #25	BLOC1S4 (ENSFCAG00000004290) #30	KIAA0232 (ENSFCAG00000010024) #31	TADA2B (ENSFCAG00000010027) #34	GRPEL1 (ENSFCAG00000041754) #35	SORCS2 (ENSFCAG00000015288) #37	AFAP1 (ENSFCAG00000015289)	ABLIM2 (ENSFCAG00000015291)	SH3TC1 (ENSFCAG00000046348)	HTRA3 (ENSFCAG00000015293)
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Suina	ANCESTRAL SPECIES	33	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00940000155541.B #27	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.o.a #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00940000164031 #36	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A
Pig	MODERN SPECIES	16	OTOP1 (ENSSSCG00000008731) #7	TMEM128 (ENSSSCG00000034122) #8	LYAR (ENSSSCG00000008729) #9	ZBTB49 (ENSSSCG00000008728) #10	NSG1 (ENSSSCG00000024892) #11	STX18 (ENSSSCG00000038731) #12	MSX1 (ENSSSCG00000008727) #14	CYTL1 (ENSSSCG00000008725) #15	STK32B (ENSSSCG00000035020) #16	EVC2 (ENSSSCG00000024399) #17	EVC (ENSSSCG00000032637) #18	CRMP1 (ENSSSCG00000022896) #19	ENSSSCG00000008709 #20	JAKMIP1 (ENSSSCG00000008710) #21	ENSSSCG00000034286	WFS1 (ENSSSCG00000032452) #22	PPP2R2C (ENSSSCG00000008712) #23	MAN2B2 (ENSSSCG00000027178) #24	ENSSSCG00000027746 #25	ENSSSCG00000038829 #27	BLOC1S4 (ENSSSCG00000059110) #30	ENSSSCG00000027349 #32	ENSSSCG00000028085 #33	TADA2B (ENSSSCG00000029624) #34	ENSSSCG00000037445 #35	PSAPL1 (ENSSSCG00000055134) #36	SORCS2 (ENSSSCG00000037539) #37	AFAP1 (ENSSSCG00000023907)	ABLIM2 (ENSSSCG00000008721)	SH3TC1 (ENSSSCG00000008722)	HTRA3 (ENSSSCG00000008723)
Chacoan peccary	MODERN SPECIES	961	DRD5 (ENSCWAG00000018889)	OTOP1 (ENSCWAG00000018858) #7	TMEM128 (ENSCWAG00000018835) #8	LYAR (ENSCWAG00000018827) #9	ZBTB49 (ENSCWAG00000018795) #10	NSG1 (ENSCWAG00000018733) #11	STX18 (ENSCWAG00000018700) #12	MSX1 (ENSCWAG00000018672) #14	CYTL1 (ENSCWAG00000018649) #15	STK32B (ENSCWAG00000018567) #16	EVC2 (ENSCWAG00000018529) #17	EVC (ENSCWAG00000018494) #18	CRMP1 (ENSCWAG00000018286) #19	ENSCWAG00000018197 #20	JAKMIP1 (ENSCWAG00000017482) #21	WFS1 (ENSCWAG00000017426) #22	PPP2R2C (ENSCWAG00000017314) #23	MAN2B2 (ENSCWAG00000017130) #24	ENSCWAG00000017104 #25	ENSCWAG00000017089 #27	BLOC1S4 (ENSCWAG00000017076) #30	KIAA0232 (ENSCWAG00000017048) #31	TBC1D14 (ENSCWAG00000016787) #32	ENSCWAG00000016755 #33	TADA2B (ENSCWAG00000016712) #34	GRPEL1 (ENSCWAG00000016681) #35	PSAPL1 (ENSCWAG00000016667) #36	SORCS2 (ENSCWAG00000015511) #37
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000155541.C #25	ENSGT00390000006790.b #30	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a #24
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000013159	ENSGT00940000157887	ENSGT00900000140979.a.a.`b.b	ENSGT00520000060950	ENSGT00530000063652.a.a	ENSGT00390000012139	ENSGT00390000000153.l.b.c.b.a.b	ENSGT00910000147694	ENSGT00940000156306	ENSGT00390000008787.a	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b	ENSGT00940000156660	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000157887	ENSGT00900000140979.a.a.`b.b	ENSGT00520000060950	ENSGT00530000063652.a.a	ENSGT00390000012139	ENSGT00390000000153.l.b.c.b.a.b	ENSGT00910000147694	ENSGT00940000156306	ENSGT00390000008787.a	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b	ENSGT00940000153169.A.b.b.a.a.b	ENSGT00940000156660	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801
Odontoceti_a	ANCESTRAL SPECIES	26	ENSGT00390000013159	ENSGT00940000157887	ENSGT00900000140979.a.a.`b.b	ENSGT00520000060950	ENSGT00530000063652.a.a	ENSGT00390000012139	ENSGT00390000000153.l.b.c.b.a.b	ENSGT00910000147694	ENSGT00940000156306	ENSGT00390000008787.a	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b	ENSGT00940000156660	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801	ENSGT00940000156733
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000013159	ENSGT00940000157887	ENSGT00900000140979.a.a.`b.b	ENSGT00520000060950	ENSGT00530000063652.a.a	ENSGT00390000012139	ENSGT00390000000153.l.b.c.b.a.b	ENSGT00910000147694	ENSGT00940000156306	ENSGT00390000008787.a	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b	ENSGT00940000156660	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801	ENSGT00940000156733
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000013159	ENSGT00940000157887	ENSGT00900000140979.a.a.`b.b	ENSGT00520000060950	ENSGT00530000063652.a.a	ENSGT00390000012139	ENSGT00390000000153.l.b.c.b.a.b	ENSGT00910000147694	ENSGT00940000156306	ENSGT00390000008787.a	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b	ENSGT00940000156660	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589	ENSGT00940000157878	ENSGT00940000156171	ENSGT00390000017043	ENSGT00390000016264	ENSGT00940000157587	ENSGT00940000158403	ENSGT00940000156801	ENSGT00940000156733
Beluga whale	MODERN SPECIES	13	LAMTOR3 (ENSDLEG00000001284)	DNAJB14 (ENSDLEG00000001308)	ENSDLEG00000001318	ENSDLEG00000001338	DDIT4L (ENSDLEG00000001345)	EMCN (ENSDLEG00000001362)	ENSDLEG00000001406	PPP3CA (ENSDLEG00000001417)	ENSDLEG00000001444	BANK1 (ENSDLEG00000001450)	SLC39A8 (ENSDLEG00000001477)	NFKB1 (ENSDLEG00000001502)	MANBA (ENSDLEG00000001605)	ENSDLEG00000001738	CISD2 (ENSDLEG00000001852)	WFS1 (ENSDLEG00000001861) #22	PPP2R2C (ENSDLEG00000001869) #23	SETD7 (ENSDLEG00000001880)	MGST2 (ENSDLEG00000001895)	MAML3 (ENSDLEG00000001906)	SCOC (ENSDLEG00000001918)	CLGN (ENSDLEG00000001932)	ELMOD2 (ENSDLEG00000001956)	TBC1D9 (ENSDLEG00000001998)
Narwhal	MODERN SPECIES	307	ENSMMNG00015012367	ENSMMNG00015012392	DDIT4L (ENSMMNG00015012408)	EMCN (ENSMMNG00015012431)	ENSMMNG00015012507	ENSMMNG00015012516	PPP3CA (ENSMMNG00015012547)	ENSMMNG00015012617	BANK1 (ENSMMNG00015012635)	SLC39A8 (ENSMMNG00015012676)	NFKB1 (ENSMMNG00015012707)	MANBA (ENSMMNG00015012754)	ENSMMNG00015012793	CISD2 (ENSMMNG00015012855)	SLC9B1 (ENSMMNG00015012884)	WFS1 (ENSMMNG00015012919) #22	PPP2R2C (ENSMMNG00015012939) #23	SETD7 (ENSMMNG00015012957)	MGST2 (ENSMMNG00015013012)	MAML3 (ENSMMNG00015013033)	SCOC (ENSMMNG00015013055)	CLGN (ENSMMNG00015013069)	ELMOD2 (ENSMMNG00015013079)	TBC1D9 (ENSMMNG00015013089)	ENSMMNG00015013116	RNF150 (ENSMMNG00015015631)	ZNF330 (ENSMMNG00015015654)	IL15 (ENSMMNG00015015698)	INPP4B (ENSMMNG00015015936)	USP38 (ENSMMNG00015016230)	GAB1 (ENSMMNG00015016325)
Vaquita	MODERN SPECIES	16	DAPP1 (ENSPSNG00000018345)	LAMTOR3 (ENSPSNG00000018278)	DNAJB14 (ENSPSNG00000018219)	ENSPSNG00000018157	ENSPSNG00000018108	DDIT4L (ENSPSNG00000018061)	EMCN (ENSPSNG00000017732)	ENSPSNG00000017663	PPP3CA (ENSPSNG00000017541)	BANK1 (ENSPSNG00000017240)	SLC39A8 (ENSPSNG00000017173)	NFKB1 (ENSPSNG00000016882)	MANBA (ENSPSNG00000016760)	ENSPSNG00000016573	CISD2 (ENSPSNG00000016497)	WFS1 (ENSPSNG00000016467) #22	PPP2R2C (ENSPSNG00000016392) #23	SETD7 (ENSPSNG00000016301)	ENSPSNG00000016177	ENSPSNG00000016125	MAML3 (ENSPSNG00000016048)	SCOC (ENSPSNG00000015865)	CLGN (ENSPSNG00000015754)	ELMOD2 (ENSPSNG00000015677)	TBC1D9 (ENSPSNG00000015613)	RNF150 (ENSPSNG00000015526)	ZNF330 (ENSPSNG00000015475)	IL15 (ENSPSNG00000015292)	INPP4B (ENSPSNG00000015200)	USP38 (ENSPSNG00000015085)	GAB1 (ENSPSNG00000014895)
Dolphin	MODERN SPECIES	3377															ENSTTRG00000016146	WFS1 (ENSTTRG00000016153) #22	PPP2R2C (ENSTTRG00000016155) #23
Sperm whale	MODERN SPECIES	18	LAMTOR3 (ENSPCTG00005000312)	DNAJB14 (ENSPCTG00005000342)	ENSPCTG00005000362	ENSPCTG00005000383	DDIT4L (ENSPCTG00005000396)	EMCN (ENSPCTG00005000427)	ENSPCTG00005000476	PPP3CA (ENSPCTG00005000512)	ENSPCTG00005000582	BANK1 (ENSPCTG00005000621)	SLC39A8 (ENSPCTG00005000697)	NFKB1 (ENSPCTG00005000726)	MANBA (ENSPCTG00005000794)	UBE2D3 (ENSPCTG00005000874)	CISD2 (ENSPCTG00005000912)	WFS1 (ENSPCTG00005000923) #22	PPP2R2C (ENSPCTG00005000935) #23	SETD7 (ENSPCTG00005000966)	ENSPCTG00005000987	ENSPCTG00005000996	MAML3 (ENSPCTG00005001012)	ENSPCTG00005001027	ENSPCTG00005001047	CLGN (ENSPCTG00005001074)	ELMOD2 (ENSPCTG00005001098)	ENSPCTG00005001118	TBC1D9 (ENSPCTG00005001153)	RNF150 (ENSPCTG00005001237)	ZNF330 (ENSPCTG00005001281)	IL15 (ENSPCTG00005001318)	INPP4B (ENSPCTG00005001389)
Blue whale	MODERN SPECIES	16	ENSBMSG00010001368	ENSBMSG00010001383	DDIT4L (ENSBMSG00010001397)	ENSBMSG00010001417	ENSBMSG00010001432	ENSBMSG00010001448	PPP3CA (ENSBMSG00010001488)	BANK1 (ENSBMSG00010001543)	ENSBMSG00010001588	SLC39A8 (ENSBMSG00010001600)	NFKB1 (ENSBMSG00010001621)	MANBA (ENSBMSG00010001654)	ENSBMSG00010001687	CISD2 (ENSBMSG00010001715)	SLC9B1 (ENSBMSG00010001740)	WFS1 (ENSBMSG00010001770) #22	PPP2R2C (ENSBMSG00010001796) #23	SETD7 (ENSBMSG00010001824)	MGST2 (ENSBMSG00010001835)	MAML3 (ENSBMSG00010001847)	ENSBMSG00010001855	SCOC (ENSBMSG00010001913)	CLGN (ENSBMSG00010001947)	MGAT4D (ENSBMSG00010001980)	ELMOD2 (ENSBMSG00010002040)	TBC1D9 (ENSBMSG00010002068)	RNF150 (ENSBMSG00010002115)	ZNF330 (ENSBMSG00010002166)	ENSBMSG00010002175	IL15 (ENSBMSG00010002198)	INPP4B (ENSBMSG00010002249)
Pecora	ANCESTRAL SPECIES	15	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b	ENSGT00940000153692.A
Yarkand deer	MODERN SPECIES	29	OTOP1 (ENSCHYG00000020927) #7	TMEM128 (ENSCHYG00000020873) #8	LYAR (ENSCHYG00000020808) #9	ZBTB49 (ENSCHYG00000020730) #10	ENSCHYG00000020601 #11	ENSCHYG00000020468 #12	MSX1 (ENSCHYG00000020422) #14	CYTL1 (ENSCHYG00000020364) #15	STK32B (ENSCHYG00000020103) #16	EVC2 (ENSCHYG00000019186) #17	EVC (ENSCHYG00000019037) #18	CRMP1 (ENSCHYG00000018819) #19	ENSCHYG00000018775 #20	JAKMIP1 (ENSCHYG00000018225) #21	ENSCHYG00000018159	WFS1 (ENSCHYG00000018113) #22	PPP2R2C (ENSCHYG00000017967) #23	ENSCHYG00000017283 #24	ENSCHYG00000016162 #24	DMP1 (ENSCHYG00000015748)	ENSCHYG00000015331	SPARCL1 (ENSCHYG00000015173)	ENSCHYG00000014882	ENSCHYG00000014859	HSD17B11 (ENSCHYG00000014635)	HSD17B13 (ENSCHYG00000014556)	KLHL8 (ENSCHYG00000014019)	AFF1 (ENSCHYG00000013429)	C4orf36 (ENSCHYG00000013363)	SLC10A6 (ENSCHYG00000013255)	PTPN13 (ENSCHYG00000011843)
Percora_a	ANCESTRAL SPECIES	18	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b	ENSGT00940000153692.A
Bovidae	ANCESTRAL SPECIES	18	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b	ENSGT00390000006247.e.a
Bovinae	ANCESTRAL SPECIES	15	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b	ENSGT00390000006247.e.a
Bos	ANCESTRAL SPECIES	15	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000158464.k	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.n
Bos_a	ANCESTRAL SPECIES	21	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000158464.k	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.n
Domestic yak	MODERN SPECIES	25	LYAR (ENSBGRG00000009901) #9	ENSBGRG00000010035	ZBTB49 (ENSBGRG00000010047) #10	NSG1 (ENSBGRG00000010087) #11	STX18 (ENSBGRG00000010223) #12	MSX1 (ENSBGRG00000010388) #14	CYTL1 (ENSBGRG00000010429) #15	STK32B (ENSBGRG00000010525) #16	EVC2 (ENSBGRG00000010733) #17	EVC (ENSBGRG00000011517) #18	ENSBGRG00000012265	CRMP1 (ENSBGRG00000012288) #19	C4orf50 (ENSBGRG00000012490) #20	JAKMIP1 (ENSBGRG00000012631) #21	ENSBGRG00000013050	WFS1 (ENSBGRG00000013121) #22	PPP2R2C (ENSBGRG00000013226) #23	ENSBGRG00000013414 #24	ENSBGRG00000013725 #24	DMP1 (ENSBGRG00000014603)	ENSBGRG00000014783	SPARCL1 (ENSBGRG00000014840)	NUDT9 (ENSBGRG00000014966)	HSD17B11 (ENSBGRG00000015134)	ENSBGRG00000015430	KLHL8 (ENSBGRG00000015486)	AFF1 (ENSBGRG00000015861)	C4orf36 (ENSBGRG00000016444)	SLC10A6 (ENSBGRG00000016493)	PTPN13 (ENSBGRG00000016575)	ENSBGRG00000016870
Wild yak	MODERN SPECIES	1632													CRMP1 (ENSBMUG00000020375) #19	ENSBMUG00000020327 #20	JAKMIP1 (ENSBMUG00000020292) #21	WFS1 (ENSBMUG00000020171) #22	PPP2R2C (ENSBMUG00000020159) #23	ENSBMUG00000020143 #24
Bos_b	ANCESTRAL SPECIES	14	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00940000158464.k	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b #24	ENSGT01030000234638.b.a.b.q.a.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.n.a
Hybrid Bos Indicus	MODERN SPECIES	25	ZBTB49 (ENSBIXG00005014310) #10	NSG1 (ENSBIXG00005014389) #11	STX18 (ENSBIXG00005005974) #12	MSX1 (ENSBIXG00005014501) #14	CYTL1 (ENSBIXG00005006226) #15	ENSBIXG00005002014	STK32B (ENSBIXG00005002027) #16	ENSBIXG00005014592	EVC2 (ENSBIXG00005014669) #17	ENSBIXG00005014684	EVC (ENSBIXG00005014829) #18	CRMP1 (ENSBIXG00005002160) #19	ENSBIXG00005014962 #20	JAKMIP1 (ENSBIXG00005015199) #21	ENSBIXG00005015285	WFS1 (ENSBIXG00005015314) #22	PPP2R2C (ENSBIXG00005015372) #23	ENSBIXG00005015774 #24	ENSBIXG00005016537 #24	DMP1 (ENSBIXG00005016673)	ENSBIXG00005016723	SPARCL1 (ENSBIXG00005007329)	NUDT9 (ENSBIXG00005016830)	ENSBIXG00005016839	HSD17B11 (ENSBIXG00005005731)	ENSBIXG00005016946	KLHL8 (ENSBIXG00005017118)	AFF1 (ENSBIXG00005017161)	C4orf36 (ENSBIXG00005017196)	ENSBIXG00005017214	ENSBIXG00005002799
Cow	MODERN SPECIES	25	TMEM128 (ENSBTAG00000003652) #8	LYAR (ENSBTAG00000003653) #9	ZBTB49 (ENSBTAG00000014680) #10	NSG1 (ENSBTAG00000005711) #11	ENSBTAG00000050796	STX18 (ENSBTAG00000005712) #12	MSX1 (ENSBTAG00000010875) #14	CYTL1 (ENSBTAG00000011163) #15	STK32B (ENSBTAG00000015409) #16	EVC2 (ENSBTAG00000004277) #17	EVC (ENSBTAG00000004287) #18	CRMP1 (ENSBTAG00000004292) #19	ENSBTAG00000021729 #20	JAKMIP1 (ENSBTAG00000011170) #21	ENSBTAG00000054994	WFS1 (ENSBTAG00000046671) #22	PPP2R2C (ENSBTAG00000020598) #23	ENSBTAG00000006508 #24	ENSBTAG00000017829 #24	DMP1 (ENSBTAG00000019132)	DSPP (ENSBTAG00000045714)	SPARCL1 (ENSBTAG00000004094)	NUDT9 (ENSBTAG00000011354)	ENSBTAG00000052418	HSD17B11 (ENSBTAG00000006307)	HSD17B13 (ENSBTAG00000031679)	ENSBTAG00000047432	KLHL8 (ENSBTAG00000002455)	AFF1 (ENSBTAG00000018488)	C4orf36 (ENSBTAG00000051915)	ENSBTAG00000050963
American bison	MODERN SPECIES	3171		DRD5 (ENSBBBG00000018138)	OTOP1 (ENSBBBG00000018133) #7	TMEM128 (ENSBBBG00000018119) #8	ENSBBBG00000018099 #9	ZBTB49 (ENSBBBG00000018051) #10	NSG1 (ENSBBBG00000018037) #11	STX18 (ENSBBBG00000017995) #12	MSX1 (ENSBBBG00000017970) #14	CYTL1 (ENSBBBG00000017963) #15	STK32B (ENSBBBG00000017951) #16	EVC2 (ENSBBBG00000017891) #17	EVC (ENSBBBG00000017842) #18	CRMP1 (ENSBBBG00000017804) #19	JAKMIP1 (ENSBBBG00000017761) #21	WFS1 (ENSBBBG00000004354) #22	PPP2R2C (ENSBBBG00000017550) #23	ENSBBBG00000017388 #24	ENSBBBG00000017182 #24	DMP1 (ENSBBBG00000008928)
Caprinae	ANCESTRAL SPECIES	13	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477.i #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.q.a.b.a #24	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b	ENSGT00390000006247.e.a	ENSGT00940000153692.A
Rambouillet Sheep	MODERN SPECIES	22	DRD5 (ENSOARG00020024384)	OTOP1 (ENSOARG00020024371) #7	TMEM128 (ENSOARG00020024364) #8	LYAR (ENSOARG00020024350) #9	ZBTB49 (ENSOARG00020024332) #10	NSG1 (ENSOARG00020024305) #11	MSX1 (ENSOARG00020024231) #14	CYTL1 (ENSOARG00020024206) #15	STK32B (ENSOARG00020024051) #16	EVC2 (ENSOARG00020024014) #17	EVC (ENSOARG00020023672) #18	CRMP1 (ENSOARG00020023499) #19	ENSOARG00020023479 #20	ENSOARG00020023467	JAKMIP1 (ENSOARG00020023163) #21	WFS1 (ENSOARG00020023129) #22	PPP2R2C (ENSOARG00020023090) #23	ENSOARG00020022932 #24	ENSOARG00020022892 #24	DMP1 (ENSOARG00020022854)	DSPP (ENSOARG00020022784)	SPARCL1 (ENSOARG00020022579)	NUDT9 (ENSOARG00020022482)	ENSOARG00020022244	ENSOARG00020021968	AFF1 (ENSOARG00020021386)	C4orf36 (ENSOARG00020021226)	SLC10A6 (ENSOARG00020021292)	PTPN13 (ENSOARG00020019325)	ENSOARG00020019244	MAPK10 (ENSOARG00020018223)
Goat	MODERN SPECIES	25	OTOP1 (ENSCHIG00000019597) #7	TMEM128 (ENSCHIG00000011114) #8	LYAR (ENSCHIG00000020398) #9	ZBTB49 (ENSCHIG00000015069) #10	NSG1 (ENSCHIG00000008294) #11	STX18 (ENSCHIG00000020439) #12	MSX1 (ENSCHIG00000014094) #14	CYTL1 (ENSCHIG00000001722) #15	STK32B (ENSCHIG00000021477) #16	EVC2 (ENSCHIG00000014543) #17	EVC (ENSCHIG00000024455) #18	CRMP1 (ENSCHIG00000017354) #19	ENSCHIG00000008410	JAKMIP1 (ENSCHIG00000022605) #21	ENSCHIG00000014433	WFS1 (ENSCHIG00000025731) #22	PPP2R2C (ENSCHIG00000016344) #23	DMP1 (ENSCHIG00000024137)	DSPP (ENSCHIG00000016631)	SPARCL1 (ENSCHIG00000007139)	NUDT9 (ENSCHIG00000020346)	HSD17B11 (ENSCHIG00000011780)	HSD17B13 (ENSCHIG00000020775)	KLHL8 (ENSCHIG00000015495)	AFF1 (ENSCHIG00000008450)	C4orf36 (ENSCHIG00000020322)	SLC10A6 (ENSCHIG00000014126)	ENSCHIG00000001076	PTPN13 (ENSCHIG00000021006)	ENSCHIG00000013818	ENSCHIG00000003527
Siberian musk deer	MODERN SPECIES	1273	DRD5 (ENSMMSG00000022201)	OTOP1 (ENSMMSG00000022207) #7	TMEM128 (ENSMMSG00000022229) #8	ENSMMSG00000022248 #9	ZBTB49 (ENSMMSG00000022265) #10	NSG1 (ENSMMSG00000022287) #11	STX18 (ENSMMSG00000022315) #12	MSX1 (ENSMMSG00000022332) #14	CYTL1 (ENSMMSG00000022341) #15	STK32B (ENSMMSG00000022366) #16	EVC2 (ENSMMSG00000014469) #17	EVC (ENSMMSG00000014574) #18	CRMP1 (ENSMMSG00000014696) #19	ENSMMSG00000014897 #20	JAKMIP1 (ENSMMSG00000014962) #21	WFS1 (ENSMMSG00000015467) #22	PPP2R2C (ENSMMSG00000015500) #23	ENSMMSG00000015548 #24	DMP1 (ENSMMSG00000015722)	ENSMMSG00000015791	SPARCL1 (ENSMMSG00000015840)	NUDT9 (ENSMMSG00000015898)	HSD17B11 (ENSMMSG00000015946)	HSD17B13 (ENSMMSG00000016012)	KLHL8 (ENSMMSG00000016116)	AFF1 (ENSMMSG00000016294)	C4orf36 (ENSMMSG00000016405)	SLC10A6 (ENSMMSG00000016456)	PTPN13 (ENSMMSG00000016540)	MAPK10 (ENSMMSG00000016767)	ARHGAP24 (ENSMMSG00000017490)
Camelidae	ANCESTRAL SPECIES	22	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00390000018549 #31	ENSGT00940000157250.p #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00940000164031 #36	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Arabian camel	MODERN SPECIES	11	OTOP1 (ENSCDRG00005000056) #7	TMEM128 (ENSCDRG00005000070) #8	LYAR (ENSCDRG00005000087) #9	ZBTB49 (ENSCDRG00005000134) #10	NSG1 (ENSCDRG00005000160) #11	STX18 (ENSCDRG00005000222) #12	MSX1 (ENSCDRG00005000274) #14	CYTL1 (ENSCDRG00005000290) #15	STK32B (ENSCDRG00005000325) #16	ENSCDRG00005000381	EVC2 (ENSCDRG00005000401) #17	EVC (ENSCDRG00005000517) #18	CRMP1 (ENSCDRG00005000897) #19	C4orf50 (ENSCDRG00005000970) #20	JAKMIP1 (ENSCDRG00005001045) #21	WFS1 (ENSCDRG00005001375) #22	PPP2R2C (ENSCDRG00005001398) #23	ENSCDRG00005001469 #24	ENSCDRG00005001487 #24	ENSCDRG00005001505 #24	ENSCDRG00005001519 #25	ENSCDRG00005001531 #25	KIAA0232 (ENSCDRG00005001561) #31	TBC1D14 (ENSCDRG00005001604) #32	ENSCDRG00005001798 #33	TADA2B (ENSCDRG00005001800) #34	GRPEL1 (ENSCDRG00005001815) #35	SORCS2 (ENSCDRG00005001824) #37	PSAPL1 (ENSCDRG00005001861) #36	AFAP1 (ENSCDRG00005001874)	ABLIM2 (ENSCDRG00005001968)
Atlantogenata	ANCESTRAL SPECIES	244																ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23
Afrotheria	ANCESTRAL SPECIES	306																ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23
Afrotheria_a	ANCESTRAL SPECIES	306																ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23
Hyrax	MODERN SPECIES	11431																WFS1 (ENSPCAG00000009967) #22
Elephant	MODERN SPECIES	226														ENSLAFG00000006025 ##21	ENSLAFG00000002431	WFS1 (ENSLAFG00000009253) #22	ENSLAFG00000031927 #23
Tenrec	MODERN SPECIES	1181																ENSETEG00000016285 #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00390000016928 #22
Armadillo	MODERN SPECIES	971																WFS1 (ENSDNOG00000037655) #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Opossum	MODERN SPECIES	4	DRD5 (ENSMODG00000001462)	TMEM128 (ENSMODG00000024746) #8	LYAR (ENSMODG00000001500) #9	ZBTB49 (ENSMODG00000001516) #10	NSG1 (ENSMODG00000001519) #11	STX18 (ENSMODG00000001530) #12	ENSMODG00000029530	MSX1 (ENSMODG00000001535) #14	CYTL1 (ENSMODG00000001542) #15	STK32B (ENSMODG00000001697) #16	EVC2 (ENSMODG00000001716) #17	EVC (ENSMODG00000001731) #18	CRMP1 (ENSMODG00000001760) #19	ENSMODG00000029793 #20	JAKMIP1 (ENSMODG00000002810) #21	WFS1 (ENSMODG00000002825) #22	PPP2R2C (ENSMODG00000002866) #23	MAN2B2 (ENSMODG00000002889) #24	S100P (ENSMODG00000002897) #28	KIAA0232 (ENSMODG00000002906) #31	TBC1D14 (ENSMODG00000002932) #32	ENSMODG00000013944 #33	TADA2B (ENSMODG00000043302) #34	ENSMODG00000002955 #35	ENSMODG00000037366	ENSMODG00000002968	AFAP1 (ENSMODG00000003012)	ABLIM2 (ENSMODG00000003062)	SH3TC1 (ENSMODG00000003098)	HTRA3 (ENSMODG00000003113)	ACOX3 (ENSMODG00000003150)
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00530000063647.B.n	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00530000063647.B.n	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00530000063647.B.n	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.A	ENSGT00940000159570	ENSGT00940000159423
Common wonbat	MODERN SPECIES	1054	SLC2A9 (ENSVURG00010022378)	DRD5 (ENSVURG00010022373)	OTOP1 (ENSVURG00010022367) #7	TMEM128 (ENSVURG00010022363) #8	LYAR (ENSVURG00010022358) #9	ZBTB49 (ENSVURG00010022353) #10	NSG1 (ENSVURG00010022350) #11	STX18 (ENSVURG00010022343) #12	MSX1 (ENSVURG00010022338) #14	CYTL1 (ENSVURG00010022336) #15	STK32B (ENSVURG00010022325) #16	EVC2 (ENSVURG00010022292) #17	EVC (ENSVURG00010022280) #18	CRMP1 (ENSVURG00010022248) #19	JAKMIP1 (ENSVURG00010022217) #21	WFS1 (ENSVURG00010022202) #22	PPP2R2C (ENSVURG00010022192) #23	MAN2B2 (ENSVURG00010022178) #24	ENSVURG00010022173 #28	KIAA0232 (ENSVURG00010022163) #31	TBC1D14 (ENSVURG00010022152) #32	ENSVURG00010022142 #33	TADA2B (ENSVURG00010022133) #34	GRPEL1 (ENSVURG00010022126) #35	ENSVURG00010022120	SORCS2 (ENSVURG00010021952) #37	AFAP1 (ENSVURG00010021912)	ABLIM2 (ENSVURG00010021886)	SH3TC1 (ENSVURG00010021859)	HTRA3 (ENSVURG00010021852)	ACOX3 (ENSVURG00010021844)
koala	MODERN SPECIES	43	TMEM128 (ENSPCIG00000028211) #8	LYAR (ENSPCIG00000028212) #9	ENSPCIG00000034887 #10	ENSPCIG00000034616 #10	ENSPCIG00000028213 #10	NSG1 (ENSPCIG00000028214) #11	STX18 (ENSPCIG00000028215) #12	MSX1 (ENSPCIG00000028218) #14	CYTL1 (ENSPCIG00000028219) #15	STK32B (ENSPCIG00000024450) #16	EVC2 (ENSPCIG00000012193) #17	EVC (ENSPCIG00000008820) #18	CRMP1 (ENSPCIG00000019167) #19	ENSPCIG00000019163 #20	JAKMIP1 (ENSPCIG00000018887) #21	WFS1 (ENSPCIG00000020571) #22	PPP2R2C (ENSPCIG00000028392) #23	MAN2B2 (ENSPCIG00000028387) #24	ENSPCIG00000028385 #28	KIAA0232 (ENSPCIG00000028370) #31	TBC1D14 (ENSPCIG00000025626) #32	TADA2B (ENSPCIG00000019936) #34	GRPEL1 (ENSPCIG00000019934) #35	ENSPCIG00000006867	SORCS2 (ENSPCIG00000000411) #37	AFAP1 (ENSPCIG00000001025)	ABLIM2 (ENSPCIG00000001097)	SH3TC1 (ENSPCIG00000023664)	HTRA3 (ENSPCIG00000023654)	ACOX3 (ENSPCIG00000023639)	TRMT44 (ENSPCIG00000023633)
Wallaby	MODERN SPECIES	1850																WFS1 (ENSMEUG00000013736) #22
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000007567	ENSSHAG00000007809 #7	TMEM128 (ENSSHAG00000021803) #8	LYAR (ENSSHAG00000029797) #9	ZBTB49 (ENSSHAG00000008414) #10	NSG1 (ENSSHAG00000028146) #11	STX18 (ENSSHAG00000008946) #12	MSX1 (ENSSHAG00000022210) #14	CYTL1 (ENSSHAG00000032272) #15	STK32B (ENSSHAG00000024135) #16	EVC2 (ENSSHAG00000014556) #17	EVC (ENSSHAG00000015096) #18	CRMP1 (ENSSHAG00000015480) #19	JAKMIP1 (ENSSHAG00000016100) #21	ENSSHAG00000029756 #20	ENSSHAG00000016725 #22	ENSSHAG00000016839 #23	ENSSHAG00000022476	ENSSHAG00000031908	ENSSHAG00000021583	ENSSHAG00000021688	ENSSHAG00000030246	ENSSHAG00000021025	ENSSHAG00000023630	ENSSHAG00000031361	ENSSHAG00000027031	ENSSHAG00000026373	ENSSHAG00000028398
Platypus	MODERN SPECIES	15	WDR1 (ENSOANG00000012065)	SLC2A9 (ENSOANG00000007038)	OTOP1 (ENSOANG00000010378) #7	ENSOANG00000042535 #8	LYAR (ENSOANG00000012997) #9	ZBTB49 (ENSOANG00000048276) #10	ENSOANG00000045191 #11	STX18 (ENSOANG00000012077) #12	MSX1 (ENSOANG00000043882) #14	CYTL1 (ENSOANG00000042158) #15	STK32B (ENSOANG00000004349) #16	ENSOANG00000004350 #17	ENSOANG00000048670 #18	CRMP1 (ENSOANG00000020714) #19	JAKMIP1 (ENSOANG00000011472) #21	WFS1 (ENSOANG00000039288) #22	PPP2R2C (ENSOANG00000048242) #23	KIAA0232 (ENSOANG00000039861) #31	ENSOANG00000040715	TADA2B (ENSOANG00000014275) #34	GRPEL1 (ENSOANG00000048425) #35	SORCS2 (ENSOANG00000041261) #37	ENSOANG00000047288	AFAP1 (ENSOANG00000039955)	ABLIM2 (ENSOANG00000039436)	ENSOANG00000039780	HTRA3 (ENSOANG00000038381)	ENSOANG00000037473	ENSOANG00000020584	GPR78 (ENSOANG00000050536)	CPZ (ENSOANG00000048753)
Sauria	ANCESTRAL SPECIES	6	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a #21	ENSGT00940000166785	ENSGT00390000003220 #20	ENSGT00940000153713.B.c.b #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT00940000159192	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000160821	ENSGT00940000163946	ENSGT00940000156857	ENSGT00440000033504.B	ENSGT00940000155867	ENSGT00940000158225	ENSGT00940000158155	ENSGT00390000003219	ENSGT00940000158804	ENSGT00390000006066	ENSGT00390000005378	ENSGT00940000157200	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000002216	ENSGT00940000158581	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00390000000645
Laterata	ANCESTRAL SPECIES	21	ENSGT00940000157821	ENSGT00940000160821	ENSGT00940000163946	ENSGT00940000156857	ENSGT00440000033504.B	ENSGT00940000155867	ENSGT00940000158225	ENSGT00940000158155	ENSGT00390000003219	ENSGT00940000158804	ENSGT00390000006066	ENSGT00390000005378	ENSGT00940000157200	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c.b #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000002216	ENSGT00940000158581	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00390000000645
Common wall lizard	MODERN SPECIES	17	SCAMP2 (ENSPMRG00000018290)	ULK3 (ENSPMRG00000018278)	CPLX3 (ENSPMRG00000018268)	CSK (ENSPMRG00000018260)	FKBP4 (ENSPMRG00000018256)	ITFG2 (ENSPMRG00000018249)	FOXM1 (ENSPMRG00000018231)	RHNO1 (ENSPMRG00000018226)	TULP3 (ENSPMRG00000018221)	ENSPMRG00000018216	ENSPMRG00000018211	PRMT8 (ENSPMRG00000018199)	CRMP1 (ENSPMRG00000017531) #19	JAKMIP1 (ENSPMRG00000017380) #21	ENSPMRG00000017364 ##23	WFS1 (ENSPMRG00000017359) #22	PPP2R2C (ENSPMRG00000017335) #23	SH3BP2 (ENSPMRG00000017325)	ADD1 (ENSPMRG00000017299)	ENSPMRG00000017243	NOP14 (ENSPMRG00000017226)	ENSPMRG00000017219	HTT (ENSPMRG00000016647)	MSANTD1 (ENSPMRG00000016563)	HGFAC (ENSPMRG00000016492)	RGS12 (ENSPMRG00000016381)	DOK7 (ENSPMRG00000016361)	ADRA2C (ENSPMRG00000016353)	HMX1 (ENSPMRG00000016347)	CPZ (ENSPMRG00000016339)	TRMT44 (ENSPMRG00000016316)
Argentine black and white tegu	MODERN SPECIES	1	ENSSMRG00000023381	ENSSMRG00000023382	CRACR2A (ENSSMRG00000023384)	PRMT8 (ENSSMRG00000023386)	ENSSMRG00000023387	ENSSMRG00000023388	TSPAN9 (ENSSMRG00000023389)	ENSSMRG00000023390	TULP3 (ENSSMRG00000023391)	FOXM1 (ENSSMRG00000023392)	TEX52 (ENSSMRG00000023393)	ITFG2 (ENSSMRG00000023394)	FKBP4 (ENSSMRG00000023395)	CRMP1 (ENSSMRG00000023396) #19	JAKMIP1 (ENSSMRG00000023397) #21	WFS1 (ENSSMRG00000023398) #22	PPP2R2C (ENSSMRG00000023399) #23	SH3BP2 (ENSSMRG00000023401)	ADD1 (ENSSMRG00000023402)	ENSSMRG00000023403	NOP14 (ENSSMRG00000023404)	HTT (ENSSMRG00000023405)	MSANTD1 (ENSSMRG00000023407)	HGFAC (ENSSMRG00000023408)	RGS12 (ENSSMRG00000023409)	DOK7 (ENSSMRG00000023411)	ADRA2C (ENSSMRG00000023413)	HMX1 (ENSSMRG00000023414)	ENSSMRG00000023415	CPZ (ENSSMRG00000023416)	TRMT44 (ENSSMRG00000023417)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00390000010229	ENSGT00940000157821	ENSGT00940000160821	ENSGT00940000163946	ENSGT00940000156857	ENSGT00440000033504.B	ENSGT00940000158225	ENSGT00940000155867	ENSGT00940000158155	ENSGT00940000158804	ENSGT00390000006066	ENSGT00390000005378	ENSGT00940000157200	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00390000002216	ENSGT00940000158581	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000162580	ENSGT00940000156391	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570
Elapidae	ANCESTRAL SPECIES	22	ENSGT00950000183159.a	ENSGT00940000159958	ENSGT00390000011368	ENSGT00390000008346	ENSGT00390000014963	ENSGT00940000161360	ENSGT00940000157110	ENSGT00940000159219	ENSGT00940000161041	ENSGT00940000153168.C.a.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00390000005378	ENSGT00940000157200	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000158581	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000162580	ENSGT00940000156391	ENSGT00940000159983	ENSGT00950000183177.b	ENSGT00390000004612	ENSGT00390000012556
Elapidae_a	ANCESTRAL SPECIES	25	ENSGT00950000183159.a	ENSGT00940000159958	ENSGT00390000011368	ENSGT00390000008346	ENSGT00390000014963	ENSGT00940000161360	ENSGT00940000157110	ENSGT00940000159219	ENSGT00940000161041	ENSGT00940000153168.C.a.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00390000005378	ENSGT00940000157200	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000158581	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000162580	ENSGT00940000156391	ENSGT00940000159983	ENSGT00950000183177.b	ENSGT00390000004612	ENSGT00390000012556
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT00950000183159.a	ENSGT00940000159958	ENSGT00390000011368	ENSGT00390000008346	ENSGT00390000014963	ENSGT00940000161360	ENSGT00940000157110	ENSGT00940000159219	ENSGT00940000161041	ENSGT00940000153168.C.a.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00390000005378	ENSGT00940000157200	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT00940000158581	ENSGT00830000128422	ENSGT00390000017459	ENSGT00390000015863	ENSGT00390000002245	ENSGT00940000159778	ENSGT00940000159741	ENSGT00390000015386	ENSGT00940000162580	ENSGT00940000156391	ENSGT00940000159983	ENSGT00950000183177.b	ENSGT00390000004612	ENSGT00390000012556
Eastern brown snake	MODERN SPECIES	12	ENSPTXG00000018236	ENSPTXG00000018235	TMEM33 (ENSPTXG00000018234)	SLC30A9 (ENSPTXG00000018224)	BEND4 (ENSPTXG00000018223)	SHISA3 (ENSPTXG00000018222)	ATP8A1 (ENSPTXG00000015719)	GRXCR1 (ENSPTXG00000015704)	KCTD8 (ENSPTXG00000015703)	YIPF7 (ENSPTXG00000015702)	GUF1 (ENSPTXG00000015690)	GNPDA2 (ENSPTXG00000015685)	ITFG2 (ENSPTXG00000015683)	FKBP4 (ENSPTXG00000015682)	CRMP1 (ENSPTXG00000015680) #19	WFS1 (ENSPTXG00000015677) #22	PPP2R2C (ENSPTXG00000015410) #23	ADD1 (ENSPTXG00000015402)	NOP14 (ENSPTXG00000015399)	MSANTD1 (ENSPTXG00000015397)	HTT (ENSPTXG00000014814)	HGFAC (ENSPTXG00000014791)	RGS12 (ENSPTXG00000014789)	DOK7 (ENSPTXG00000014785)	HMX1 (ENSPTXG00000014784)	CPZ (ENSPTXG00000014577)	SEL1L3 (ENSPTXG00000014557)	ENSPTXG00000014555	ENSPTXG00000014553	ZCCHC4 (ENSPTXG00000014551)	PI4K2B (ENSPTXG00000014547)
Mainland tiger snake	MODERN SPECIES	713																WFS1 (ENSNSUG00000017282) #22	ENSNSUG00000017313 #23	ENSNSUG00000017314 #23	ADD1 (ENSNSUG00000017316)
Blue-lipped sea krait	MODERN SPECIES	2897																WFS1 (ENSLLTG00000000540) #22	PPP2R2C (ENSLLTG00000000527) #23
Indian cobra	MODERN SPECIES	3	ENSNNAG00000017720	ENSNNAG00000017717	ENSNNAG00000017714	TMEM33 (ENSNNAG00000017711)	SLC30A9 (ENSNNAG00000017706)	BEND4 (ENSNNAG00000017699)	SHISA3 (ENSNNAG00000017692)	ATP8A1 (ENSNNAG00000017644)	KCTD8 (ENSNNAG00000017629)	YIPF7 (ENSNNAG00000017624)	GUF1 (ENSNNAG00000017608)	GNPDA2 (ENSNNAG00000017601)	ITFG2 (ENSNNAG00000017589)	FKBP4 (ENSNNAG00000017575)	CRMP1 (ENSNNAG00000017292) #19	WFS1 (ENSNNAG00000017189) #22	PPP2R2C (ENSNNAG00000016869) #23	ADD1 (ENSNNAG00000016733)	ENSNNAG00000016695	ENSNNAG00000016656	HTT (ENSNNAG00000015459)	MSANTD1 (ENSNNAG00000015260)	RGS12 (ENSNNAG00000015161)	DOK7 (ENSNNAG00000015066)	HMX1 (ENSNNAG00000015026)	CPZ (ENSNNAG00000015015)	ENSNNAG00000014962	ZCCHC4 (ENSNNAG00000014948)	PI4K2B (ENSNNAG00000014852)	SEPSECS (ENSNNAG00000014821)	LGI2 (ENSNNAG00000014722)
Lizard	MODERN SPECIES	4	FGF6 (ENSACAG00000038407)	C12orf4 (ENSACAG00000009479)	ENSACAG00000036035	AKAP3 (ENSACAG00000009585)	ENSACAG00000009588	ENSACAG00000043222	KCNA1 (ENSACAG00000015431)	KCNA5 (ENSACAG00000015427)	ENSACAG00000044451	FOXM1 (ENSACAG00000015333)	ITFG2 (ENSACAG00000015272)	FKBP4 (ENSACAG00000015240)	ENSACAG00000037352	CRMP1 (ENSACAG00000015019) #19	JAKMIP1 (ENSACAG00000014944) #21	WFS1 (ENSACAG00000005077) #22	ppp2r2c (ENSACAG00000041673) #23	SH3BP2 (ENSACAG00000005190)	ADD1 (ENSACAG00000005207)	ENSACAG00000005264	NOP14 (ENSACAG00000005288)	HTT (ENSACAG00000005400)	MED28 (ENSACAG00000011107)	FAM184B (ENSACAG00000011063)	ENSACAG00000044171	NCAPG (ENSACAG00000002066)	ENSACAG00000042769	ENSACAG00000044681	SLIT2 (ENSACAG00000001304)	PACRGL (ENSACAG00000001294)	ENSACAG00000040215
tuatara	MODERN SPECIES	173	SLC2A9 (ENSSPUG00000007517)	DRD5 (ENSSPUG00000007552)	OTOP1 (ENSSPUG00000007569) #7	TMEM128 (ENSSPUG00000007584) #8	LYAR (ENSSPUG00000007598) #9	ZBTB49 (ENSSPUG00000007609) #10	NSG1 (ENSSPUG00000007623) #11	STX18 (ENSSPUG00000007639) #12	MSX1 (ENSSPUG00000007665) #14	CYTL1 (ENSSPUG00000007680) #15	STK32B (ENSSPUG00000007710) #16	EVC2 (ENSSPUG00000007731) #17	EVC (ENSSPUG00000007764) #18	CRMP1 (ENSSPUG00000007817) #19	JAKMIP1 (ENSSPUG00000007857) #21	WFS1 (ENSSPUG00000007878) #22	PPP2R2C (ENSSPUG00000007891) #23
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c.b #21	ENSGT01030000235227	ENSGT00940000153713.B.c.a #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Aves	ANCESTRAL SPECIES	3	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Golden eagle	MODERN SPECIES		OTOP1 (ENSACCG00020000166) #7	TMEM128 (ENSACCG00020000165) #8	LYAR (ENSACCG00020000164) #9	ZBTB49 (ENSACCG00020000163) #10	NSG1 (ENSACCG00020000162) #11	STX18 (ENSACCG00020000161) #12	MSX1 (ENSACCG00020000160) #14	CYTL1 (ENSACCG00020000159) #15	STK32B (ENSACCG00020000158) #16	EVC2 (ENSACCG00020000157) #17	EVC (ENSACCG00020000156) #18	CRMP1 (ENSACCG00020000155) #19	ENSACCG00020000154	ENSACCG00020000153 #21	ENSACCG00020000152 #21	WFS1 (ENSACCG00020000151) #22	PPP2R2C (ENSACCG00020000150) #23	MAN2B2 (ENSACCG00020000148) #24	S100P (ENSACCG00020000147) #28	KIAA0232 (ENSACCG00020000146) #31	TBC1D14 (ENSACCG00020000145) #32	ENSACCG00020000144 #33	TADA2B (ENSACCG00020000143) #34	GRPEL1 (ENSACCG00020000142) #35	SORCS2 (ENSACCG00020000141) #37	AFAP1 (ENSACCG00020000140)	ABLIM2 (ENSACCG00020000139)	ENSACCG00020000138	HTRA3 (ENSACCG00020000137)	ACOX3 (ENSACCG00020000136)	TRMT44 (ENSACCG00020000135)
Kakapo	MODERN SPECIES	24	DRD5 (ENSSHBG00005010659)	OTOP1 (ENSSHBG00005010316) #7	TMEM128 (ENSSHBG00005010250) #8	LYAR (ENSSHBG00005010222) #9	ZBTB49 (ENSSHBG00005010175) #10	NSG1 (ENSSHBG00005000700) #11	STX18 (ENSSHBG00005018968) #12	MSX1 (ENSSHBG00005018964) #14	CYTL1 (ENSSHBG00005018950) #15	STK32B (ENSSHBG00005018947) #16	EVC2 (ENSSHBG00005018930) #17	EVC (ENSSHBG00005018912) #18	CRMP1 (ENSSHBG00005018895) #19	ENSSHBG00005018866	JAKMIP1 (ENSSHBG00005018856) #21	WFS1 (ENSSHBG00005018849) #22	PPP2R2C (ENSSHBG00005018840) #23	MAN2B2 (ENSSHBG00005018830) #24	S100P (ENSSHBG00005018824) #28	KIAA0232 (ENSSHBG00005018818) #31	TBC1D14 (ENSSHBG00005018800) #32	TADA2B (ENSSHBG00005018792) #34	GRPEL1 (ENSSHBG00005018773) #35	SORCS2 (ENSSHBG00005018635) #37	AFAP1 (ENSSHBG00005018588)	ABLIM2 (ENSSHBG00005017227)	ENSSHBG00005017135	HTRA3 (ENSSHBG00005017129)	ACOX3 (ENSSHBG00005017015)	TRMT44 (ENSSHBG00005016993)	GPR78 (ENSSHBG00005016989)
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00950000183001.b
Great tit	MODERN SPECIES	23	DRD5 (ENSPMJG00000016397)	OTOP1 (ENSPMJG00000016398) #7	TMEM128 (ENSPMJG00000016399) #8	LYAR (ENSPMJG00000016400) #9	ZBTB49 (ENSPMJG00000016401) #10	STX18 (ENSPMJG00000016402) #12	NSG1 (ENSPMJG00000016403) #11	MSX1 (ENSPMJG00000016405) #14	CYTL1 (ENSPMJG00000016407) #15	STK32B (ENSPMJG00000016408) #16	EVC2 (ENSPMJG00000016409) #17	EVC (ENSPMJG00000016410) #18	CRMP1 (ENSPMJG00000016411) #19	ENSPMJG00000016412	JAKMIP1 (ENSPMJG00000016413) #21	WFS1 (ENSPMJG00000016414) #22	PPP2R2C (ENSPMJG00000016415) #23	MAN2B2 (ENSPMJG00000016417) #24	S100P (ENSPMJG00000016418) #28	KIAA0232 (ENSPMJG00000016419) #31	TBC1D14 (ENSPMJG00000016420) #32	TADA2B (ENSPMJG00000016421) #34	GRPEL1 (ENSPMJG00000016422) #35	SORCS2 (ENSPMJG00000016424) #37	AFAP1 (ENSPMJG00000016431)	ABLIM2 (ENSPMJG00000016432)	ENSPMJG00000016433	HTRA3 (ENSPMJG00000016434)	ACOX3 (ENSPMJG00000016435)	TRMT44 (ENSPMJG00000016436)	GPR78 (ENSPMJG00000016438)
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a.b #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.i #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00950000183001.b
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a.b #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.i #24	ENSGT01030000234638.b.a.b.j #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a.b #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b.i #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645	ENSGT00950000183001.b
Zebra finch	MODERN SPECIES	25	OTOP1 (ENSTGUG00000009909) #7	TMEM128 (ENSTGUG00000009913) #8	LYAR (ENSTGUG00000009916) #9	ZBTB49 (ENSTGUG00000009920) #10	NSG1 (ENSTGUG00000009930) #11	STX18 (ENSTGUG00000009937) #12	MSX1 (ENSTGUG00000009947) #14	CYTL1 (ENSTGUG00000009949) #15	STK32B (ENSTGUG00000009953) #16	EVC2 (ENSTGUG00000009975) #17	EVC (ENSTGUG00000009987) #18	ENSTGUG00000029632	CRMP1 (ENSTGUG00000010001) #19	ENSTGUG00000027123	JAKMIP1 (ENSTGUG00000010025) #21	WFS1 (ENSTGUG00000010045) #22	PPP2R2C (ENSTGUG00000010058) #23	MAN2B2 (ENSTGUG00000010078) #24	S100P (ENSTGUG00000010098) #28	KIAA0232 (ENSTGUG00000010100) #31	TBC1D14 (ENSTGUG00000010105) #32	TADA2B (ENSTGUG00000026011) #34	GRPEL1 (ENSTGUG00000020628) #35	SORCS2 (ENSTGUG00000010129) #37	AFAP1 (ENSTGUG00000010189)	ABLIM2 (ENSTGUG00000010211)	ENSTGUG00000010236	HTRA3 (ENSTGUG00000010252)	ACOX3 (ENSTGUG00000010262)	TRMT44 (ENSTGUG00000010279)	GPR78 (ENSTGUG00000010289)
Common canary	MODERN SPECIES	2	TMEM128 (ENSSCAG00000000452) #8	LYAR (ENSSCAG00000000445) #9	ZBTB49 (ENSSCAG00000000427) #10	NSG1 (ENSSCAG00000000422) #11	STX18 (ENSSCAG00000000340) #12	MSX1 (ENSSCAG00000000294) #14	CYTL1 (ENSSCAG00000000291) #15	ENSSCAG00000000287	STK32B (ENSSCAG00000000275) #16	EVC2 (ENSSCAG00000000226) #17	EVC (ENSSCAG00000000198) #18	CRMP1 (ENSSCAG00000000179) #19	ENSSCAG00000000138	ENSSCAG00000000128 #21	ENSSCAG00000000115 #21	WFS1 (ENSSCAG00000000100) #22	PPP2R2C (ENSSCAG00000016060) #23	MAN2B2 (ENSSCAG00000016052) #24	S100P (ENSSCAG00000016046) #28	KIAA0232 (ENSSCAG00000016039) #31	TBC1D14 (ENSSCAG00000016030) #32	TADA2B (ENSSCAG00000016028) #34	GRPEL1 (ENSSCAG00000016023) #35	SORCS2 (ENSSCAG00000015922) #37	AFAP1 (ENSSCAG00000015833)	ABLIM2 (ENSSCAG00000015639)	ENSSCAG00000015579	HTRA3 (ENSSCAG00000015569)	ACOX3 (ENSSCAG00000015562)	TRMT44 (ENSSCAG00000015556)	GPR78 (ENSSCAG00000015546)
Medium ground finch	MODERN SPECIES	173	SLC2A9 (ENSGFOG00000002082)	DRD5 (ENSGFOG00000002095)	OTOP1 (ENSGFOG00000002103) #7	TMEM128 (ENSGFOG00000002111) #8	LYAR (ENSGFOG00000002116) #9	ZBTB49 (ENSGFOG00000002127) #10	NSG1 (ENSGFOG00000002136) #11	STX18 (ENSGFOG00000002152) #12	MSX1 (ENSGFOG00000002186) #14	CYTL1 (ENSGFOG00000002202) #15	STK32B (ENSGFOG00000002209) #16	EVC2 (ENSGFOG00000002230) #17	EVC (ENSGFOG00000002254) #18	CRMP1 (ENSGFOG00000002297) #19	JAKMIP1 (ENSGFOG00000002350) #21	WFS1 (ENSGFOG00000002387) #22	PPP2R2C (ENSGFOG00000002410) #23	ENSGFOG00000002442 #24
Flycatcher	MODERN SPECIES	22	DRD5 (ENSFALG00000009387)	OTOP1 (ENSFALG00000009394) #7	TMEM128 (ENSFALG00000023993) #8	LYAR (ENSFALG00000009417) #9	ZBTB49 (ENSFALG00000009426) #10	NSG1 (ENSFALG00000009442) #11	STX18 (ENSFALG00000026510) #12	MSX1 (ENSFALG00000009464) #14	CYTL1 (ENSFALG00000009468) #15	STK32B (ENSFALG00000009476) #16	EVC2 (ENSFALG00000009488) #17	EVC (ENSFALG00000009507) #18	CRMP1 (ENSFALG00000009557) #19	ENSFALG00000023527	JAKMIP1 (ENSFALG00000009595) #21	WFS1 (ENSFALG00000009607) #22	PPP2R2C (ENSFALG00000009617) #23	MAN2B2 (ENSFALG00000009630) #24	S100P (ENSFALG00000024959) #28	KIAA0232 (ENSFALG00000009641) #31	TBC1D14 (ENSFALG00000009650) #32	TADA2B (ENSFALG00000009654) #34	GRPEL1 (ENSFALG00000026769) #35	SORCS2 (ENSFALG00000009666) #37	AFAP1 (ENSFALG00000009673)	ABLIM2 (ENSFALG00000009676)	ENSFALG00000009677	HTRA3 (ENSFALG00000009680)	ACOX3 (ENSFALG00000009684)	TRMT44 (ENSFALG00000009686)	GPR78 (ENSFALG00000009692)
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Pink-footed goose	MODERN SPECIES	7	DRD5 (ENSABRG00000001264)	OTOP1 (ENSABRG00000001421) #7	TMEM128 (ENSABRG00000001436) #8	LYAR (ENSABRG00000001444) #9	ZBTB49 (ENSABRG00000001494) #10	NSG1 (ENSABRG00000001537) #11	STX18 (ENSABRG00000001552) #12	MSX1 (ENSABRG00000001616) #14	CYTL1 (ENSABRG00000001639) #15	STK32B (ENSABRG00000001655) #16	EVC2 (ENSABRG00000001688) #17	EVC (ENSABRG00000001811) #18	CRMP1 (ENSABRG00000001873) #19	ENSABRG00000001914	JAKMIP1 (ENSABRG00000001971) #21	WFS1 (ENSABRG00000002111) #22	PPP2R2C (ENSABRG00000002144) #23	MAN2B2 (ENSABRG00000002285) #24	S100P (ENSABRG00000002317) #28	KIAA0232 (ENSABRG00000002341) #31	TBC1D14 (ENSABRG00000002358) #32	ENSABRG00000002425 #33	TADA2B (ENSABRG00000002438) #34	GRPEL1 (ENSABRG00000002454) #35	SORCS2 (ENSABRG00000002579) #37	AFAP1 (ENSABRG00000002757)	ABLIM2 (ENSABRG00000002855)	ENSABRG00000002976	HTRA3 (ENSABRG00000003022)	ACOX3 (ENSABRG00000003051)	TRMT44 (ENSABRG00000003154)
Duck	MODERN SPECIES	22	OTOP1 (ENSAPLG00000003029) #7	TMEM128 (ENSAPLG00000023798) #8	LYAR (ENSAPLG00000003243) #9	ZBTB49 (ENSAPLG00000003489) #10	NSG1 (ENSAPLG00000017448) #11	STX18 (ENSAPLG00000003942) #12	MSX1 (ENSAPLG00000018673) #14	CYTL1 (ENSAPLG00000004125) #15	STK32B (ENSAPLG00000004217) #16	EVC2 (ENSAPLG00000004238) #17	CRMP1 (ENSAPLG00000005068) #19	EVC (ENSAPLG00000004565) #18	ENSAPLG00000030559	ENSAPLG00000018584 #21	ENSAPLG00000005851 #21	WFS1 (ENSAPLG00000012849) #22	PPP2R2C (ENSAPLG00000012437) #23	MAN2B2 (ENSAPLG00000005435) #24	S100P (ENSAPLG00000013517) #28	TBC1D14 (ENSAPLG00000013358) #32	ENSAPLG00000000631 #33	TADA2B (ENSAPLG00000000629) #34	GRPEL1 (ENSAPLG00000023287) #35	KIAA0232 (ENSAPLG00000013499) #31	SORCS2 (ENSAPLG00000012740) #37	AFAP1 (ENSAPLG00000012327)	ABLIM2 (ENSAPLG00000012162)	ENSAPLG00000011482	HTRA3 (ENSAPLG00000020579)	ACOX3 (ENSAPLG00000010626)	TRMT44 (ENSAPLG00000010512)
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b.b #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT01070000257179	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a.k	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Japanese quail	MODERN SPECIES	22	OTOP1 (ENSCJPG00005018520) #7	TMEM128 (ENSCJPG00005018521) #8	LYAR (ENSCJPG00005018522) #9	ZBTB49 (ENSCJPG00005018523) #10	NSG1 (ENSCJPG00005018524) #11	STX18 (ENSCJPG00005018525) #12	MSX1 (ENSCJPG00005018526) #14	CYTL1 (ENSCJPG00005018527) #15	STK32B (ENSCJPG00005018528) #16	EVC2 (ENSCJPG00005018529) #17	EVC (ENSCJPG00005018530) #18	CRMP1 (ENSCJPG00005018531) #19	ENSCJPG00005018532	ENSCJPG00005018533 #21	ENSCJPG00005018534 #21	WFS1 (ENSCJPG00005018535) #22	PPP2R2C (ENSCJPG00005018536) #23	MAN2B2 (ENSCJPG00005018539) #24	ENSCJPG00005018540	ENSCJPG00005018541	KIAA0232 (ENSCJPG00005018543) #31	TBC1D14 (ENSCJPG00005018544) #32	ENSCJPG00005018545 #33	TADA2B (ENSCJPG00005018546) #34	GRPEL1 (ENSCJPG00005018547) #35	SORCS2 (ENSCJPG00005018548) #37	AFAP1 (ENSCJPG00005018549)	ABLIM2 (ENSCJPG00005018550)	ENSCJPG00005018551	HTRA3 (ENSCJPG00005018553)	ACOX3 (ENSCJPG00005018556)
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b.a #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT01070000257179	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a.a	ENSGT00950000182850.a.b.a.a.k	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Chicken	MODERN SPECIES	33	DRD5 (ENSGALG00010010116)	OTOP1 (ENSGALG00010010134) #7	TMEM128 (ENSGALG00010009164) #8	LYAR (ENSGALG00010009173) #9	ZBTB49 (ENSGALG00010009190) #10	NSG1 (ENSGALG00010009216) #11	STX18 (ENSGALG00010009239) #12	MSX1 (ENSGALG00010011141) #14	STK32B (ENSGALG00010011187) #16	CYTL1 (ENSGALG00010011205) #15	EVC2 (ENSGALG00010011267) #17	EVC (ENSGALG00010011300) #18	CRMP1 (ENSGALG00010011345) #19	ENSGALG00010011368	JAKMIP1 (ENSGALG00010011399) #21	WFS1 (ENSGALG00010011417) #22	PPP2R2C (ENSGALG00010011465) #23	MAN2B2 (ENSGALG00010011487) #24	ENSGALG00010011498	ENSGALG00010011522	KIAA0232 (ENSGALG00010011549) #31	TBC1D14 (ENSGALG00010011597) #32	ENSGALG00010011612 #33	TADA2B (ENSGALG00010011633) #34	GRPEL1 (ENSGALG00010011638) #35	SORCS2 (ENSGALG00010011655) #37	AFAP1 (ENSGALG00010009608)	ABLIM2 (ENSGALG00010009653)	SH3TC1 (ENSGALG00010009700)	HTRA3 (ENSGALG00010009102)	ACOX3 (ENSGALG00010009294)
Turkey	MODERN SPECIES	24	CD38 (ENSMGAG00000012634)	BST1 (ENSMGAG00000012635)	FBXL5 (ENSMGAG00000012647)	CC2D2A (ENSMGAG00000012655)	C1QTNF7 (ENSMGAG00000012661)	ENSMGAG00000005200	ENSMGAG00000012824 #34	ENSMGAG00000012825 #35	TBC1D14 (ENSMGAG00000017001) #32	ENSMGAG00000020189 #33	ENSMGAG00000012807 #31	ENSMGAG00000012796 #24	ENSMGAG00000022839 #24	ENSMGAG00000019603 #23	ENSMGAG00000012790 #23	ENSMGAG00000012785 #22	JAKMIP1 (ENSMGAG00000012771) #21	ENSMGAG00000018397	ENSMGAG00000012734 #18	ENSMGAG00000012744 #19	STK32B (ENSMGAG00000012722) #16	ENSMGAG00000018887 #14	ENSMGAG00000012708 #11	ENSMGAG00000012712 #12	ENSMGAG00000012702 #8	ENSMGAG00000012703 #9	ZBTB49 (ENSMGAG00000012706) #10	OTOP1 (ENSMGAG00000012701) #7	ENSMGAG00000012697	ENSMGAG00000012700	ENSMGAG00000022219
African ostrich	MODERN SPECIES	1016	OTOP1 (ENSSCUG00000016052) #7	TMEM128 (ENSSCUG00000016050) #8	LYAR (ENSSCUG00000016048) #9	ZBTB49 (ENSSCUG00000016045) #10	NSG1 (ENSSCUG00000016043) #11	STX18 (ENSSCUG00000016038) #12	MSX1 (ENSSCUG00000016030) #14	CYTL1 (ENSSCUG00000016026) #15	STK32B (ENSSCUG00000016023) #16	EVC2 (ENSSCUG00000016018) #17	EVC (ENSSCUG00000016014) #18	CRMP1 (ENSSCUG00000016009) #19	ENSSCUG00000015997	ENSSCUG00000015986 #21	ENSSCUG00000015982 #21	WFS1 (ENSSCUG00000015976) #22	PPP2R2C (ENSSCUG00000015970) #23	MAN2B2 (ENSSCUG00000015968) #24	ENSSCUG00000015966	KIAA0232 (ENSSCUG00000015948) #31	TBC1D14 (ENSSCUG00000015944) #32	GRPEL1 (ENSSCUG00000015939) #35	TADA2B (ENSSCUG00000015935) #34	SORCS2 (ENSSCUG00000015929) #37	AFAP1 (ENSSCUG00000015923)	ABLIM2 (ENSSCUG00000015911)	ENSSCUG00000015904	HTRA3 (ENSSCUG00000015900)	ACOX3 (ENSSCUG00000015894)	TRMT44 (ENSSCUG00000015891)	GPR78 (ENSSCUG00000015887)
Australian saltwater crocodile	MODERN SPECIES	65	OTOP1 (ENSCPRG00005003914) #7	TMEM128 (ENSCPRG00005003909) #8	LYAR (ENSCPRG00005003903) #9	ZBTB49 (ENSCPRG00005003899) #10	NSG1 (ENSCPRG00005003884) #11	STX18 (ENSCPRG00005003880) #12	MSX1 (ENSCPRG00005003860) #14	CYTL1 (ENSCPRG00005003847) #15	STK32B (ENSCPRG00005003830) #16	ENSCPRG00005003803	EVC2 (ENSCPRG00005003798) #17	EVC (ENSCPRG00005003729) #18	CRMP1 (ENSCPRG00005003697) #19	ENSCPRG00005003680	JAKMIP1 (ENSCPRG00005003672) #21	WFS1 (ENSCPRG00005003665) #22	PPP2R2C (ENSCPRG00005003659) #23	MAN2B2 (ENSCPRG00005003638) #24	ENSCPRG00005003633	S100P (ENSCPRG00005003629) #28	KIAA0232 (ENSCPRG00005003604) #31	TBC1D14 (ENSCPRG00005003585) #32	ENSCPRG00005003574 #33	TADA2B (ENSCPRG00005003569) #34	GRPEL1 (ENSCPRG00005003566) #35	ENSCPRG00005003557	SORCS2 (ENSCPRG00005003524) #37	AFAP1 (ENSCPRG00005003509)	ABLIM2 (ENSCPRG00005003360)	ENSCPRG00005003262	HTRA3 (ENSCPRG00005003226)
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750.`b #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D.c	ENSGT00940000159570	ENSGT00940000159423
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750.`b #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D.c	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Goode s thornscrub tortoise	MODERN SPECIES	19	TMEM128 (ENSGEVG00005013720) #8	LYAR (ENSGEVG00005013667) #9	ENSGEVG00005013625 #10	ZBTB49 (ENSGEVG00005013583) #10	NSG1 (ENSGEVG00005013517) #11	STX18 (ENSGEVG00005013472) #12	MSX1 (ENSGEVG00005013433) #14	CYTL1 (ENSGEVG00005013385) #15	STK32B (ENSGEVG00005013182) #16	EVC2 (ENSGEVG00005012592) #17	EVC (ENSGEVG00005012374) #18	CRMP1 (ENSGEVG00005011994) #19	ENSGEVG00005011898 #21	ENSGEVG00005011851 #21	ENSGEVG00005011783	WFS1 (ENSGEVG00005011738) #22	PPP2R2C (ENSGEVG00005011619) #23	MAN2B2 (ENSGEVG00005011458) #24	S100P (ENSGEVG00005011358) #28	KIAA0232 (ENSGEVG00005011333) #31	TBC1D14 (ENSGEVG00005011285) #32	ENSGEVG00005011256 #33	TADA2B (ENSGEVG00005011238) #34	GRPEL1 (ENSGEVG00005011217) #35	SORCS2 (ENSGEVG00005010610) #37	AFAP1 (ENSGEVG00005010457)	ABLIM2 (ENSGEVG00005010117)	ENSGEVG00005009702	HTRA3 (ENSGEVG00005009626)	ACOX3 (ENSGEVG00005009570)	GPR78 (ENSGEVG00005009219)
Abingdon island giant tortoise	MODERN SPECIES	1664								MSX1 (ENSCABG00000016726) #14	CYTL1 (ENSCABG00000016724) #15	STK32B (ENSCABG00000016719) #16	EVC2 (ENSCABG00000016713) #17	EVC (ENSCABG00000016692) #18	CRMP1 (ENSCABG00000016606) #19	ENSCABG00000016595 #21	ENSCABG00000016592 #21	WFS1 (ENSCABG00000016583) #22	PPP2R2C (ENSCABG00000016570) #23
Emydidae	ANCESTRAL SPECIES	1	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750.`b #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000003220 #20	ENSGT00940000153713.B.c.b #21	ENSGT00940000153713.B.c.a #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT01030000236356	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D.c	ENSGT00940000159570	ENSGT00940000159423
Three-toed box turtle	MODERN SPECIES	26	SLC2A9 (ENSTMTG00000007455)	DRD5 (ENSTMTG00000007482)	TMEM128 (ENSTMTG00000007505) #8	LYAR (ENSTMTG00000007524) #9	ZBTB49 (ENSTMTG00000007562) #10	NSG1 (ENSTMTG00000007591) #11	STX18 (ENSTMTG00000007630) #12	MSX1 (ENSTMTG00000007738) #14	CYTL1 (ENSTMTG00000007759) #15	STK32B (ENSTMTG00000007831) #16	EVC2 (ENSTMTG00000007848) #17	EVC (ENSTMTG00000007885) #18	CRMP1 (ENSTMTG00000007924) #19	JAKMIP1 (ENSTMTG00000008119) #21	ENSTMTG00000008189	WFS1 (ENSTMTG00000008214) #22	PPP2R2C (ENSTMTG00000008237) #23	MAN2B2 (ENSTMTG00000008295) #24	ENSTMTG00000008326	S100P (ENSTMTG00000008342) #28	KIAA0232 (ENSTMTG00000000071) #31	TBC1D14 (ENSTMTG00000000113) #32	ENSTMTG00000000147 #33	TADA2B (ENSTMTG00000000170) #34	GRPEL1 (ENSTMTG00000000187) #35	SORCS2 (ENSTMTG00000000224) #37	AFAP1 (ENSTMTG00000000264)	ABLIM2 (ENSTMTG00000000378)	ENSTMTG00000000583	HTRA3 (ENSTMTG00000000640)	ACOX3 (ENSTMTG00000000680)
painted turtle	MODERN SPECIES	735	TMEM128 (ENSCPBG00000005684) #8	LYAR (ENSCPBG00000005694) #9	ZBTB49 (ENSCPBG00000005715) #10	NSG1 (ENSCPBG00000005741) #11	STX18 (ENSCPBG00000005749) #12	MSX1 (ENSCPBG00000005760) #14	CYTL1 (ENSCPBG00000005764) #15	STK32B (ENSCPBG00000005772) #16	ENSCPBG00000005777	EVC2 (ENSCPBG00000005781) #17	EVC (ENSCPBG00000005805) #18	CRMP1 (ENSCPBG00000005843) #19	ENSCPBG00000005861 #20	JAKMIP1 (ENSCPBG00000005873) #21	ENSCPBG00000005911	WFS1 (ENSCPBG00000005922) #22	PPP2R2C (ENSCPBG00000005936) #23	MAN2B2 (ENSCPBG00000005953) #24	S100P (ENSCPBG00000005979) #28	KIAA0232 (ENSCPBG00000005999) #31	TBC1D14 (ENSCPBG00000006010) #32	ENSCPBG00000006022 #33	TADA2B (ENSCPBG00000006029) #34	GRPEL1 (ENSCPBG00000006033) #35
Chinese turtle	MODERN SPECIES	1451	TMEM128 (ENSPSIG00000015156) #8	LYAR (ENSPSIG00000015351) #9	ZBTB49 (ENSPSIG00000015554) #10	NSG1 (ENSPSIG00000015842) #11	STX18 (ENSPSIG00000016373) #12	MSX1 (ENSPSIG00000016608) #14	CYTL1 (ENSPSIG00000016686) #15	STK32B (ENSPSIG00000016748) #16	EVC2 (ENSPSIG00000016765) #17	EVC (ENSPSIG00000005108) #18	CRMP1 (ENSPSIG00000005503) #19	ENSPSIG00000006474	ENSPSIG00000000900	ENSPSIG00000006621 #21	ENSPSIG00000006793 #21	WFS1 (ENSPSIG00000007097) #22	PPP2R2C (ENSPSIG00000007905) #23	MAN2B2 (ENSPSIG00000008794) #24	S100P (ENSPSIG00000010218) #28	KIAA0232 (ENSPSIG00000010236) #31	TBC1D14 (ENSPSIG00000010414) #32	ENSPSIG00000010792 #33	TADA2B (ENSPSIG00000010812) #34	GRPEL1 (ENSPSIG00000010924) #35	SORCS2 (ENSPSIG00000011002) #37	AFAP1 (ENSPSIG00000012038)	ENSPSIG00000012785	ABLIM2 (ENSPSIG00000012808)	ENSPSIG00000013599	HTRA3 (ENSPSIG00000013705)	ACOX3 (ENSPSIG00000013982)
Anura	ANCESTRAL SPECIES	2	ENSGT00940000157037.a	ENSGT00940000159350.f #7	ENSGT00940000159350.e #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00940000153713.B.c #21	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00530000063812.D	ENSGT00940000159570	ENSGT00940000159423
Frog	MODERN SPECIES		otop1.2 (ENSXETG00000041367) #7	otop1 (ENSXETG00000016028) #7	svip (ENSXETG00000016036) #8	lyar (ENSXETG00000016038) #9	zbtb49 (ENSXETG00000016041) #10	nsg1 (ENSXETG00000038539) #11	stx18 (ENSXETG00000016051) #12	msx1 (ENSXETG00000044104) #14	cytl1 (ENSXETG00000032408) #15	stk32b (ENSXETG00000030063) #16	ENSXETG00000048912	evc2 (ENSXETG00000029923) #17	evc (ENSXETG00000033121) #18	crmp1 (ENSXETG00000011600) #19	jakmip1 (ENSXETG00000011601) #21	wfs1 (ENSXETG00000035947) #22	ppp2r2c (ENSXETG00000011604) #23	man2b2 (ENSXETG00000011609) #24	ablim2 (ENSXETG00000011610)	afap1 (ENSXETG00000011611)	ENSXETG00000048627	sorcs2 (ENSXETG00000022892) #37	grpel1 (ENSXETG00000022900) #35	tada2b (ENSXETG00000022903) #34	ccdc96 (ENSXETG00000037177) #33	tbc1d14 (ENSXETG00000022908) #32	adpgkl (ENSXETG00000022910)	kiaa0232 (ENSXETG00000022909) #31	s100p (ENSXETG00000031325) #28	ENSXETG00000039660	sh3tc1 (ENSXETG00000031697)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000000456	ACOX3 (ENSLLEG00000000388)	HTRA3 (ENSLLEG00000000364)	ENSLLEG00000000355	ENSLLEG00000000349	ENSLLEG00000000329	ENSLLEG00000000321	ENSLLEG00000000293	ENSLLEG00000000281	ABLIM2 (ENSLLEG00000000194)	ENSLLEG00000003724	AFAP1 (ENSLLEG00000003640)	SORCS2 (ENSLLEG00000003556) #37	ENSLLEG00000003541	ENSLLEG00000003534	WFS1 (ENSLLEG00000003519) #22	PPP2R2C (ENSLLEG00000003349) #23	MAN2B2 (ENSLLEG00000003261) #24	ENSLLEG00000003244	ENSLLEG00000003234	ENSLLEG00000003220	ENSLLEG00000003214	ENSLLEG00000003209	ENSLLEG00000003188	ENSLLEG00000003167 #28	ENSLLEG00000003152 #28	KIAA0232 (ENSLLEG00000003135) #31	TBC1D14 (ENSLLEG00000003124) #32	ENSLLEG00000003118 #33	TADA2B (ENSLLEG00000003111) #34	GRPEL1 (ENSLLEG00000003099) #35
Coelacanth	MODERN SPECIES	774														JAKMIP1 (ENSLACG00000002755) #21	ENSLACG00000010699	WFS1 (ENSLACG00000011538) #22	PPP2R2C (ENSLACG00000012275) #23	ENSLACG00000013714	ENSLACG00000014902
Actinopterygii	ANCESTRAL SPECIES	20	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00940000159570	ENSGT00940000159423	ENSGT00390000000645
Neopterygii	ANCESTRAL SPECIES	35	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928 #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT01100000263482.F	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT00950000183712	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00940000159570	ENSGT00940000159423
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	181	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000166785	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000159769.b	ENSGT00940000155279.C.a.b	ENSGT00390000014876
Clupeocephala	ANCESTRAL SPECIES	338								ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727	ENSGT00940000165832	ENSGT00940000154757	ENSGT00940000163443	ENSGT00940000155857.e	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	103	ENSGT00940000153617.C.f	ENSGT01030000236196	ENSGT00940000155527.j.b	ENSGT00390000017890.b.a	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727	ENSGT00940000165832	ENSGT00940000154757.xb.b	ENSGT00940000163443	ENSGT00940000155857.e.a	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000165569	ENSGT00940000167725.a	ENSGT00940000167725.b	ENSGT00940000154889	ENSGT00940000159636	ENSGT00940000171367
Acanthomorphata	ANCESTRAL SPECIES	40	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT01030000236196	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT00940000154757.xb.b	ENSGT00940000163443	ENSGT00940000155857.e.a	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT01030000236196	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT00940000154757.xb.b	ENSGT00940000163443	ENSGT00940000155857.e.a	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a	ENSGT00940000167725.b
Percomorphaceae	ANCESTRAL SPECIES	17	ENSGT00940000177384	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT01030000236196	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000155804.k.b	ENSGT01030000236196	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.a.b	ENSGT00400000023727.a.a	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000155279.C.a.a	ENSGT00940000155150.a	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT01030000236196	ENSGT00940000177878	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000155279.C.a.b.e.a	ENSGT00940000155279.C.a.a	ENSGT00940000155150.a	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826
Atherinomorphae	ANCESTRAL SPECIES	20	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000155279.C.a.b.e.a	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000155279.C.a.b.e.a	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569
Aplocheiloidei	ANCESTRAL SPECIES	32	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000154889	ENSGT00940000159636
Turquoise killifish	MODERN SPECIES	1617	exoc1l (ENSNFUG00015020090)	smc2 (ENSNFUG00015020117)	tmem175 (ENSNFUG00015020537)	ENSNFUG00015020540	kdm4c (ENSNFUG00015020558)	ENSNFUG00015021289	ENSNFUG00015023368	ENSNFUG00015023376	TYRP1 (ENSNFUG00015023384)	ENSNFUG00015023395	ADGRL3 (ENSNFUG00015023415)	ENSNFUG00015023623	ENSNFUG00015023624	ENSNFUG00015023628	CRMP1 (ENSNFUG00015023700) #19	WFS1 (ENSNFUG00015006757) #22	ppp2r2ca (ENSNFUG00015006762) ##23	hpf1 (ENSNFUG00015006771)	ENSNFUG00015006777	ENSNFUG00015006794	ENSNFUG00015007041	camk2d2 (ENSNFUG00015007058)	ENSNFUG00015007149	ENSNFUG00015007153	ENSNFUG00015007172	ENSNFUG00015007233	FBXO10 (ENSNFUG00015007242)	POLR1E (ENSNFUG00015007253)	ZBTB5 (ENSNFUG00015007268)	GRHPRB (ENSNFUG00015007277)	UBA6 (ENSNFUG00015007322)
Mangrove rivulus	MODERN SPECIES	86	TYRP1 (ENSKMAG00000000177)	ENSKMAG00000000249	ENSKMAG00000000275	ADGRL3 (ENSKMAG00000000299)	gtf2e2 (ENSKMAG00000000332)	smim18 (ENSKMAG00000000378)	DCTN6 (ENSKMAG00000000386)	HGSNAT (ENSKMAG00000000428)	rbpja (ENSKMAG00000000445)	ENSKMAG00000000490	ENSKMAG00000000501	ENSKMAG00000000514	ENSKMAG00000000524	crmp1 (ENSKMAG00000000535) #19	ENSKMAG00000000620	WFS1 (ENSKMAG00000000636) #22	ppp2r2ca (ENSKMAG00000000648) ##23
Cyprinodontoidei	ANCESTRAL SPECIES	15	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b.i	ENSGT00400000023727.b.j	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000155279.C.a.a.l	ENSGT00940000155279.C.a.b.e.a	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694
NAME_4	ANCESTRAL SPECIES	70														ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000177601	ENSGT00940000155279.C.a.b.e.a	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569
Mummichog	MODERN SPECIES	2223														ENSFHEG00000010067	crmp1 (ENSFHEG00000010062) #19	WFS1 (ENSFHEG00000010020) #22	ppp2r2ca (ENSFHEG00000010016) ##23	hpf1 (ENSFHEG00000009993)	ENSFHEG00000009975	ENSFHEG00000009908	ENSFHEG00000009892	camk2d2 (ENSFHEG00000009876)	ENSFHEG00000009833	FBXO10 (ENSFHEG00000009813)	polr1e (ENSFHEG00000009801)	ZBTB5 (ENSFHEG00000009792)	grhprb (ENSFHEG00000009760)	UBA6 (ENSFHEG00000009730)	ENSFHEG00000009685	ENSFHEG00000009653	melk (ENSFHEG00000009612)
Sheepshead minnow	MODERN SPECIES	243														ENSCVAG00000020074	crmp1 (ENSCVAG00000020058) #19	WFS1 (ENSCVAG00000020001) #22	ppp2r2ca (ENSCVAG00000019994) ##23	hpf1 (ENSCVAG00000019964)	ENSCVAG00000019939	ENSCVAG00000000513	camk2d2 (ENSCVAG00000019831)	ENSCVAG00000019779	FBXO10 (ENSCVAG00000019771)	polr1e (ENSCVAG00000019759)	ZBTB5 (ENSCVAG00000019747)	grhprb (ENSCVAG00000000874)	UBA6 (ENSCVAG00000019674)	POLQ (ENSCVAG00000019651)	ENSCVAG00000019575	melk (ENSCVAG00000019488)	pax5 (ENSCVAG00000019366)
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00940000177878	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b.i	ENSGT00400000023727.b.j	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000155279.C.a.a.l	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569
Poecilia	ANCESTRAL SPECIES	6	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00940000177878	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b.i	ENSGT00400000023727.b.j	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000154889
NAME_6	ANCESTRAL SPECIES	47	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00940000177878	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b.i	ENSGT00400000023727.b.j	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000154889
Sailfin molly	MODERN SPECIES	668													ENSPLAG00000019675	ENSPLAG00000019659	crmp1 (ENSPLAG00000019634) #19	WFS1 (ENSPLAG00000000438) #22	ppp2r2ca (ENSPLAG00000019583) ##23	ENSPLAG00000019569	hpf1 (ENSPLAG00000019551)	ANK2 (ENSPLAG00000019534)
Amazon molly	MODERN SPECIES	295	ENSPFOG00000015484	ENSPFOG00000015661	TYRP1 (ENSPFOG00000016088)	ENSPFOG00000016179	ADGRL3 (ENSPFOG00000016241)	gtf2e2 (ENSPFOG00000016382)	smim18 (ENSPFOG00000020146)	ENSPFOG00000016433	ENSPFOG00000016453	rbpja (ENSPFOG00000016494)	STIM2 (ENSPFOG00000016556)	ENSPFOG00000024524	ENSPFOG00000016592	ENSPFOG00000016595	crmp1 (ENSPFOG00000016623) #19	WFS1 (ENSPFOG00000016702) #22	ppp2r2ca (ENSPFOG00000016742) ##23	ENSPFOG00000016766	hpf1 (ENSPFOG00000016797)	ANK2 (ENSPFOG00000016848)	camk2d2 (ENSPFOG00000017035)	ENSPFOG00000017033
Guppy	MODERN SPECIES	439	ENSPREG00000011230	ENSPREG00000011036	TYRP1 (ENSPREG00000010917)	ENSPREG00000010850	ADGRL3 (ENSPREG00000010586)	smim18 (ENSPREG00000010507)	gtf2e2 (ENSPREG00000010486)	DCTN6 (ENSPREG00000010472)	ENSPREG00000010444	rbpja (ENSPREG00000010297)	STIM2 (ENSPREG00000010192)	ENSPREG00000010148	ENSPREG00000010138	ENSPREG00000010129	crmp1 (ENSPREG00000010103) #19	WFS1 (ENSPREG00000010077) #22	ppp2r2ca (ENSPREG00000010056) ##23	hpf1 (ENSPREG00000010038)	ANK2 (ENSPREG00000009960)	camk2d2 (ENSPREG00000009806)	ENSPREG00000009575	ENSPREG00000009499	FBXO10 (ENSPREG00000009485)	polr1e (ENSPREG00000009470)	ENSPREG00000009458	ENSPREG00000009437	cnga1a (ENSPREG00000009416)	ENSPREG00000009400	bdh2 (ENSPREG00000009365)	ENSPREG00000009342	cisd2 (ENSPREG00000009328)
Platyfish	MODERN SPECIES	19	kdm4c (ENSXMAG00000023645)	ENSXMAG00000011984	TYRP1 (ENSXMAG00000012045)	ENSXMAG00000012077	ADGRL3 (ENSXMAG00000012102)	ENSXMAG00000021800	gtf2e2 (ENSXMAG00000012141)	smim18 (ENSXMAG00000019693)	ENSXMAG00000023015	ENSXMAG00000012177	rbpja (ENSXMAG00000012207)	STIM2 (ENSXMAG00000012254)	ENSXMAG00000026434	ENSXMAG00000012258	crmp1 (ENSXMAG00000012278) #19	WFS1 (ENSXMAG00000012351) #22	ppp2r2ca (ENSXMAG00000012375) ##23	ENSXMAG00000013671	hpf1 (ENSXMAG00000012400)	ENSXMAG00000012408	ENSXMAG00000021771	ENSXMAG00000028088	camk2d2 (ENSXMAG00000012446)	ENSXMAG00000026893	ENSXMAG00000026664	FBXO10 (ENSXMAG00000012473)	polr1e (ENSXMAG00000012484)	ZBTB5 (ENSXMAG00000012510)	grhprb (ENSXMAG00000012518)	UBA6 (ENSXMAG00000012548)	POLQ (ENSXMAG00000012597)
Oryzias	ANCESTRAL SPECIES	15	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Oryzias_b	ANCESTRAL SPECIES	29	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Indian medaka	MODERN SPECIES	21	ecpas (ENSOMEG00000014908)	ENSOMEG00000001027	ENSOMEG00000014791	ENSOMEG00000014764	TYRP1 (ENSOMEG00000014715)	ENSOMEG00000014698	ADGRL3 (ENSOMEG00000014640)	gtf2e2 (ENSOMEG00000014610)	smim18 (ENSOMEG00000014593)	DCTN6 (ENSOMEG00000014586)	ENSOMEG00000014565	rbpja (ENSOMEG00000014525)	ENSOMEG00000014488	ENSOMEG00000014461	crmp1 (ENSOMEG00000014427) #19	WFS1 (ENSOMEG00000014371) #22	ppp2r2ca (ENSOMEG00000014344) ##23	ENSOMEG00000014313	hpf1 (ENSOMEG00000014263)	ENSOMEG00000014166	ENSOMEG00000014138	ENSOMEG00000014101	ENSOMEG00000014053	camk2d2 (ENSOMEG00000014019)	ENSOMEG00000013850	ENSOMEG00000013730	FBXO10 (ENSOMEG00000013304)	polr1e (ENSOMEG00000013264)	ZBTB5 (ENSOMEG00000000894)	grhprb (ENSOMEG00000013201)	UBA6 (ENSOMEG00000013131)
Javanese ricefish	MODERN SPECIES		smc2 (ENSOJAG00000015443)	kdm4c (ENSOJAG00000013891)	ENSOJAG00000008199	TYRP1 (ENSOJAG00000007953)	ENSOJAG00000007820	ADGRL3 (ENSOJAG00000004774)	smim18 (ENSOJAG00000004223)	gtf2e2 (ENSOJAG00000004072)	DCTN6 (ENSOJAG00000003897)	HGSNAT (ENSOJAG00000003456)	rbpja (ENSOJAG00000003267)	STIM2 (ENSOJAG00000003027)	ENSOJAG00000002956	ENSOJAG00000002948	crmp1 (ENSOJAG00000002315) #19	WFS1 (ENSOJAG00000002110) #22	ppp2r2ca (ENSOJAG00000002089) ##23	ENSOJAG00000002069	hpf1 (ENSOJAG00000002044)	ENSOJAG00000001074	camk2d2 (ENSOJAG00000000420)	CXCL8 (ENSOJAG00000000132)	ENSOJAG00000000078	FBXO10 (ENSOJAG00000013714)	polr1e (ENSOJAG00000013699)	ZBTB5 (ENSOJAG00000013690)	grhprb (ENSOJAG00000013668)	ENSOJAG00000013547	ENSOJAG00000013483	ENSOJAG00000013456	melk (ENSOJAG00000013178)
Oryzias_a	ANCESTRAL SPECIES	23	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00940000162559	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000165569	ENSGT00940000167725.a	ENSGT00940000167725.b
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000004723	ENSORLG00000004753	ENSORLG00000004792	ENSORLG00000004806	gtf2e2 (ENSORLG00000004825)	smim18 (ENSORLG00000023687)	DCTN6 (ENSORLG00000004837)	ENSORLG00000004882	ENSORLG00000004897	ENSORLG00000029705	ENSORLG00000028789	ENSORLG00000026446	ENSORLG00000023677	ENSORLG00000004916	crmp1 (ENSORLG00000027778) #19	WFS1 (ENSORLG00000004929) #22	ppp2r2ca (ENSORLG00000004957) ##23	ENSORLG00000029779	hpf1 (ENSORLG00000004968)	ENSORLG00000005003	ENSORLG00000030473	ENSORLG00000029230	ENSORLG00000025992	ENSORLG00000024792	camk2d2 (ENSORLG00000005088)	ENSORLG00000005096	CXCL8 (ENSORLG00000028062)	FBXO10 (ENSORLG00000005114)	polr1e (ENSORLG00000005143)	ZBTB5 (ENSORLG00000005151)	grhprb (ENSORLG00000005172)
Chinese medaka	MODERN SPECIES	96														ENSOSIG00000019162	crmp1 (ENSOSIG00000019031) #19	WFS1 (ENSOSIG00000018984) #22	ppp2r2ca (ENSOSIG00000018979) ##23	ENSOSIG00000018976	hpf1 (ENSOSIG00000018970)	ANK2 (ENSOSIG00000018304)	camk2d2 (ENSOSIG00000017869)	ENSOSIG00000017813	ENSOSIG00000017809	FBXO10 (ENSOSIG00000017801)	polr1e (ENSOSIG00000017789)	ZBTB5 (ENSOSIG00000017788)	grhprb (ENSOSIG00000017785)	UBA6 (ENSOSIG00000017769)	ENSOSIG00000017604	ENSOSIG00000017573	melk (ENSOSIG00000017521)
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT01030000236196	ENSGT00940000177878	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Burton s mouthbrooder	MODERN SPECIES	615													pcdh18b (ENSHBUG00000018132)	ENSHBUG00000018144	crmp1 (ENSHBUG00000018230) #19	WFS1 (ENSHBUG00000018255) #22	ppp2r2ca (ENSHBUG00000018283) ##23	ENSHBUG00000018304	ANK2 (ENSHBUG00000018424)	camk2d2 (ENSHBUG00000018479)	ENSHBUG00000018496	ENSHBUG00000018517
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
P. nyererei	MODERN SPECIES	402													ENSPNYG00000002246	ENSPNYG00000002191	crmp1 (ENSPNYG00000002149) #19	WFS1 (ENSPNYG00000002136) #22	ppp2r2ca (ENSPNYG00000002107) ##23	ENSPNYG00000002088	hpf1 (ENSPNYG00000002058)	ANK2 (ENSPNYG00000001906)	camk2d2 (ENSPNYG00000001224)	ENSPNYG00000001165	FBXO10 (ENSPNYG00000001041)	polr1e (ENSPNYG00000001032)	ZBTB5 (ENSPNYG00000000992)	grhprb (ENSPNYG00000000950)	UBA6 (ENSPNYG00000000834)	ENSPNYG00000000819	ENSPNYG00000000804	ENSPNYG00000000761	ENSPNYG00000000734
Haplochromini_B	ANCESTRAL SPECIES	8	ENSGT00940000153617.C.f	ENSGT00940000181745	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.a.a.c	ENSGT01100000263949.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Zebra mbuna	MODERN SPECIES	16														ENSMZEG00005021450	crmp1 (ENSMZEG00005021454) #19	WFS1 (ENSMZEG00005021468) #22	ppp2r2ca (ENSMZEG00005021472) ##23	ENSMZEG00005021479	hpf1 (ENSMZEG00005021483)	ANK2 (ENSMZEG00005021490)	camk2d2 (ENSMZEG00005021510)	ENSMZEG00005021528	ENSMZEG00005021530	FBXO10 (ENSMZEG00005021532)	polr1e (ENSMZEG00005021536)	ZBTB5 (ENSMZEG00005021538)	grhprb (ENSMZEG00005021543)	UBA6 (ENSMZEG00005021553)	POLQ (ENSMZEG00005021576)	ENSMZEG00005021591	ENSMZEG00005021599
Eastern happy	MODERN SPECIES	18	ENSACLG00000011227	ENSACLG00000011719	TYRP1 (ENSACLG00000011752)	ENSACLG00000011772	ADGRL3 (ENSACLG00000011861)	gtf2e2 (ENSACLG00000011939)	smim18 (ENSACLG00000011954)	DCTN6 (ENSACLG00000011976)	HGSNAT (ENSACLG00000012041)	rbpja (ENSACLG00000012078)	STIM2 (ENSACLG00000012115)	ENSACLG00000012155	ENSACLG00000012186	ENSACLG00000012221	crmp1 (ENSACLG00000012241) #19	WFS1 (ENSACLG00000012306) #22	ppp2r2ca (ENSACLG00000012319) ##23	ENSACLG00000012374	hpf1 (ENSACLG00000012405)	ENSACLG00000012468	camk2d2 (ENSACLG00000012862)	ENSACLG00000013497	ENSACLG00000013625	FBXO10 (ENSACLG00000013644)	ZBTB5 (ENSACLG00000013658)	polr1e (ENSACLG00000013685)	grhprb (ENSACLG00000013699)	UBA6 (ENSACLG00000013731)	POLQ (ENSACLG00000013865)	ENSACLG00000014036	ENSACLG00000014164
Lyretail cichlid	MODERN SPECIES	301	smc2 (ENSNBRG00000017664)	ecpas (ENSNBRG00000017570)	kdm4c (ENSNBRG00000017522)	ENSNBRG00000017456	TYRP1 (ENSNBRG00000017425)	ENSNBRG00000017338	ADGRL3 (ENSNBRG00000017271)	smim18 (ENSNBRG00000017249)	gtf2e2 (ENSNBRG00000017242)	DCTN6 (ENSNBRG00000017226)	HGSNAT (ENSNBRG00000017214)	rbpja (ENSNBRG00000017183)	STIM2 (ENSNBRG00000017167)	ENSNBRG00000017148	crmp1 (ENSNBRG00000017119) #19	WFS1 (ENSNBRG00000017107) #22	ppp2r2ca (ENSNBRG00000017086) ##23	ENSNBRG00000017070	hpf1 (ENSNBRG00000017051)	ENSNBRG00000017029	ENSNBRG00000017003	ENSNBRG00000016961	camk2d2 (ENSNBRG00000016936)	ENSNBRG00000016923	ENSNBRG00000016909	FBXO10 (ENSNBRG00000016842)	polr1e (ENSNBRG00000016822)	ZBTB5 (ENSNBRG00000016800)	grhprb (ENSNBRG00000016762)	UBA6 (ENSNBRG00000016689)	ENSNBRG00000016669
Nile tilapia	MODERN SPECIES	18	kdm4c (ENSONIG00000008824)	ENSONIG00000008832	TYRP1 (ENSONIG00000008846)	ENSONIG00000029433	ADGRL3 (ENSONIG00000008860)	smim18 (ENSONIG00000043015)	gtf2e2 (ENSONIG00000008865)	DCTN6 (ENSONIG00000008868)	HGSNAT (ENSONIG00000008872)	rbpja (ENSONIG00000043047)	STIM2 (ENSONIG00000008875)	ENSONIG00000042062	ENSONIG00000037076	ENSONIG00000008880	crmp1 (ENSONIG00000008887) #19	WFS1 (ENSONIG00000008897) #22	ppp2r2ca (ENSONIG00000008902) ##23	ENSONIG00000008905	hpf1 (ENSONIG00000008911)	ENSONIG00000008914	camk2d2 (ENSONIG00000008917)	ENSONIG00000029754	ENSONIG00000040454	FBXO10 (ENSONIG00000008918)	polr1e (ENSONIG00000008921)	ZBTB5 (ENSONIG00000008925)	grhprb (ENSONIG00000008927)	UBA6 (ENSONIG00000008930)	POLQ (ENSONIG00000008937)	ENSONIG00000008940	ENSONIG00000008944
Midas cichlid	MODERN SPECIES	274	ENSACIG00000014529	smim18 (ENSACIG00000014520)	gtf2e2 (ENSACIG00000014507)	DCTN6 (ENSACIG00000014499)	ENSACIG00000014471	rbpja (ENSACIG00000014433)	STIM2 (ENSACIG00000014212)	ENSACIG00000014185	ENSACIG00000014168	ENSACIG00000014159	ENSACIG00000014151	ENSACIG00000014138	ENSACIG00000014131	ENSACIG00000014115	crmp1 (ENSACIG00000012963) #19	WFS1 (ENSACIG00000012828) #22	ppp2r2ca (ENSACIG00000012807) ##23	ENSACIG00000012764	hpf1 (ENSACIG00000012747)	ENSACIG00000012737	ENSACIG00000012702	ENSACIG00000012678	ENSACIG00000012670
Pomacentridae	ANCESTRAL SPECIES	8	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155586.B	ENSGT00940000177878	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000177601	ENSGT00940000155279.C.a.b.f	ENSGT00940000155279.C.a.b.e.a	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000177878	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Amphiprion	ANCESTRAL SPECIES		ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000177878	ENSGT00940000155527.j.b	ENSGT00940000159842.pc.a.a.b.b.b.a	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b.f	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Clown anemonefish	MODERN SPECIES	712												ENSAOCG00000008732	ENSAOCG00000008743	ENSAOCG00000008781	crmp1 (ENSAOCG00000008848) #19	WFS1 (ENSAOCG00000008893) #22	ppp2r2ca (ENSAOCG00000008933) ##23	ENSAOCG00000008968	hpf1 (ENSAOCG00000000530)
Orange clownfish	MODERN SPECIES	17	ENSAPEG00000021741	TYRP1 (ENSAPEG00000021687)	ENSAPEG00000021642	ENSAPEG00000021616	ADGRL3 (ENSAPEG00000021421)	ENSAPEG00000021388	smim18 (ENSAPEG00000021366)	gtf2e2 (ENSAPEG00000021340)	DCTN6 (ENSAPEG00000021316)	HGSNAT (ENSAPEG00000021302)	rbpja (ENSAPEG00000021264)	ENSAPEG00000021067	ENSAPEG00000021025	ENSAPEG00000020969	crmp1 (ENSAPEG00000020908) #19	WFS1 (ENSAPEG00000020866) #22	ppp2r2ca (ENSAPEG00000020822) ##23	ENSAPEG00000020790	hpf1 (ENSAPEG00000020760)	ENSAPEG00000020724	ENSAPEG00000020656	camk2d2 (ENSAPEG00000020635)	ENSAPEG00000020615	ENSAPEG00000020603	FBXO10 (ENSAPEG00000020593)	polr1e (ENSAPEG00000020581)	ZBTB5 (ENSAPEG00000020562)	grhprb (ENSAPEG00000020535)	UBA6 (ENSAPEG00000020511)	POLQ (ENSAPEG00000020432)	ENSAPEG00000020338
Spiny chromis	MODERN SPECIES	703												ENSAPOG00000020761	ENSAPOG00000020738	ENSAPOG00000020730	crmp1 (ENSAPOG00000020708) #19	WFS1 (ENSAPOG00000020622) #22	ppp2r2ca (ENSAPOG00000020586) ##23	ENSAPOG00000020534	hpf1 (ENSAPOG00000020498)
Bicolor damselfish	MODERN SPECIES	299	ENSSPAG00000017961	ENSSPAG00000017995	ENSSPAG00000018086	TYRP1 (ENSSPAG00000018509)	ENSSPAG00000018541	ADGRL3 (ENSSPAG00000018591)	gtf2e2 (ENSSPAG00000018750)	smim18 (ENSSPAG00000018779)	DCTN6 (ENSSPAG00000018797)	ENSSPAG00000018839	rbpja (ENSSPAG00000018868)	STIM2 (ENSSPAG00000018902)	ENSSPAG00000018914	ENSSPAG00000018928	crmp1 (ENSSPAG00000018953) #19	WFS1 (ENSSPAG00000018975) #22	ppp2r2ca (ENSSPAG00000018993) ##23	ENSSPAG00000019008	ENSSPAG00000019019	hpf1 (ENSSPAG00000019040)	ENSSPAG00000019071	ENSSPAG00000019101	ENSSPAG00000019128
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.a.b	ENSGT00400000023727.a.a	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.a.b	ENSGT00400000023727.a.a	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Anabantoidei	ANCESTRAL SPECIES		ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Climbing perch	MODERN SPECIES		ENSATEG00000021647	ENSATEG00000021558	ENSATEG00000021528	ENSATEG00000021335	ENSATEG00000021292	ENSATEG00000029001	ENSATEG00000021184	SMIM18 (ENSATEG00000021153)	GTF2E2 (ENSATEG00000021140)	DCTN6 (ENSATEG00000021125)	ENSATEG00000021103	rbpja (ENSATEG00000021086)	ENSATEG00000020936	ENSATEG00000020897	crmp1 (ENSATEG00000020872) #19	WFS1 (ENSATEG00000020851) #22	ppp2r2ca (ENSATEG00000020822) ##23	hpf1 (ENSATEG00000020795)	ENSATEG00000020709	camk2d2 (ENSATEG00000020671)	ENSATEG00000020661	CXCL8 (ENSATEG00000028656)	FBXO10 (ENSATEG00000020631)	ENSATEG00000020609	ZBTB5 (ENSATEG00000020589)	ENSATEG00000020561	ENSATEG00000020397	ENSATEG00000020362	ENSATEG00000020279	ENSATEG00000025989	ENSATEG00000020197
Siamese fighting fish	MODERN SPECIES		smc2 (ENSBSLG00000012664)	ecpas (ENSBSLG00000012695)	kdm4c (ENSBSLG00000012714)	ENSBSLG00000012935	TYRP1 (ENSBSLG00000020744)	ENSBSLG00000020767	ENSBSLG00000020834	gtf2e2 (ENSBSLG00000022545)	smim18 (ENSBSLG00000022561)	DCTN6 (ENSBSLG00000022566)	HGSNAT (ENSBSLG00000022618)	rbpja (ENSBSLG00000022652)	ENSBSLG00000022659	ENSBSLG00000022796	crmp1 (ENSBSLG00000022943) #19	WFS1 (ENSBSLG00000023569) #22	ppp2r2ca (ENSBSLG00000023578) ##23	ENSBSLG00000023594	hpf1 (ENSBSLG00000023652)	ENSBSLG00000023696	camk2d2 (ENSBSLG00000024485)	ENSBSLG00000024701	ENSBSLG00000024710	FBXO10 (ENSBSLG00000024838)	polr1e (ENSBSLG00000024846)	ZBTB5 (ENSBSLG00000024854)	grhprb (ENSBSLG00000024865)	UBA6 (ENSBSLG00000024991)	ENSBSLG00000025433	ENSBSLG00000025507	melk (ENSBSLG00000025542)
Zig-zag eel	MODERN SPECIES		ENSMAMG00000002446	ENSMAMG00000002219	ENSMAMG00000002197	ENSMAMG00000028189	ENSMAMG00000028522	ENSMAMG00000025250	SMIM18 (ENSMAMG00000002067)	GTF2E2 (ENSMAMG00000002039)	DCTN6 (ENSMAMG00000002028)	ENSMAMG00000002005	rbpja (ENSMAMG00000001939)	ENSMAMG00000001901	ENSMAMG00000001890	ENSMAMG00000024407	crmp1 (ENSMAMG00000001735) #19	WFS1 (ENSMAMG00000001700) #22	ppp2r2ca (ENSMAMG00000001659) ##23	ENSMAMG00000001584	hpf1 (ENSMAMG00000001555)	ENSMAMG00000001435	camk2d2 (ENSMAMG00000001316)	ENSMAMG00000001287	ENSMAMG00000001272	FBXO10 (ENSMAMG00000001233)	ENSMAMG00000001260	ZBTB5 (ENSMAMG00000001195)	ENSMAMG00000001161	ENSMAMG00000000947	ENSMAMG00000000877	ENSMAMG00000000767	ENSMAMG00000000731
Carangaria	ANCESTRAL SPECIES		ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.a.b	ENSGT00400000023727.a.a	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Pleuronectoidei	ANCESTRAL SPECIES	21	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Turbot	MODERN SPECIES	20	ENSSMAG00000013083	ENSSMAG00000012984	ENSSMAG00000012743	ENSSMAG00000012712	ENSSMAG00000012539	ENSSMAG00000012386	SMIM18 (ENSSMAG00000012371)	GTF2E2 (ENSSMAG00000012351)	DCTN6 (ENSSMAG00000012302)	ENSSMAG00000012281	rbpja (ENSSMAG00000012195)	ENSSMAG00000012189	ENSSMAG00000024259	ENSSMAG00000027615	crmp1 (ENSSMAG00000012069) #19	WFS1 (ENSSMAG00000034750) #22	ppp2r2ca (ENSSMAG00000012018) ##23	ENSSMAG00000012004	hpf1 (ENSSMAG00000011981)	ENSSMAG00000027862	ENSSMAG00000011868	camk2d2 (ENSSMAG00000011762)	CXCL8 (ENSSMAG00000011742)	ENSSMAG00000011731	FBXO10 (ENSSMAG00000011711)	ENSSMAG00000011672	ZBTB5 (ENSSMAG00000011663)	ENSSMAG00000011633	ENSSMAG00000011501	ENSSMAG00000011427	ENSSMAG00000011382
Tongue sole	MODERN SPECIES	19	smc2 (ENSCSEG00000006524)	ecpas (ENSCSEG00000006470)	kdm4c (ENSCSEG00000006423)	ENSCSEG00000006286	TYRP1 (ENSCSEG00000006262)	ENSCSEG00000006192	ADGRL3 (ENSCSEG00000006125)	smim18 (ENSCSEG00000006118)	gtf2e2 (ENSCSEG00000006111)	DCTN6 (ENSCSEG00000006103)	ENSCSEG00000006097	rbpja (ENSCSEG00000006030)	STIM2 (ENSCSEG00000006014)	ENSCSEG00000005997	crmp1 (ENSCSEG00000005981) #19	WFS1 (ENSCSEG00000005973) #22	ppp2r2ca (ENSCSEG00000005966) ##23	hpf1 (ENSCSEG00000005962)	ANK2 (ENSCSEG00000005938)	camk2d2 (ENSCSEG00000005184)	ENSCSEG00000005131	FBXO10 (ENSCSEG00000005128)	ENSCSEG00000005125	polr1e (ENSCSEG00000005121)	ZBTB5 (ENSCSEG00000005116)	grhprb (ENSCSEG00000005109)	UBA6 (ENSCSEG00000005081)	POLQ (ENSCSEG00000005068)	ENSCSEG00000005063	ENSCSEG00000005053	ENSCSEG00000005046
Carangaria_A	ANCESTRAL SPECIES	14	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.a.b	ENSGT00400000023727.a.a	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Seriola	ANCESTRAL SPECIES	29	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Yellowtail amberjack	MODERN SPECIES	2982	ENSSLDG00000024512	ENSSLDG00000024546	TYRP1 (ENSSLDG00000024554)	ENSSLDG00000024571	ADGRL3 (ENSSLDG00000024579)	ENSSLDG00000024602	gtf2e2 (ENSSLDG00000024609)	smim18 (ENSSLDG00000024621)	DCTN6 (ENSSLDG00000024624)	ENSSLDG00000024640	rbpja (ENSSLDG00000024657)	STIM2 (ENSSLDG00000024677)	ENSSLDG00000024689	ENSSLDG00000024695	crmp1 (ENSSLDG00000024703) #19	WFS1 (ENSSLDG00000024747) #22	ppp2r2ca (ENSSLDG00000024757) ##23	ENSSLDG00000024772	ENSSLDG00000024778	hpf1 (ENSSLDG00000024781)	ANK2 (ENSSLDG00000024800)	camk2d2 (ENSSLDG00000024872)	ENSSLDG00000024899	ENSSLDG00000024905	FBXO10 (ENSSLDG00000024907)	polr1e (ENSSLDG00000024918)	ZBTB5 (ENSSLDG00000024927)	grhprb (ENSSLDG00000024932)	UBA6 (ENSSLDG00000024941)	POLQ (ENSSLDG00000024994)	ENSSLDG00000025023
Greater amberjack	MODERN SPECIES	101													ENSSDUG00000022186	ENSSDUG00000022188	crmp1 (ENSSDUG00000022196) #19	WFS1 (ENSSDUG00000022208) #22	ppp2r2ca (ENSSDUG00000022214) ##23	ENSSDUG00000022218	hpf1 (ENSSDUG00000022223)	ANK2 (ENSSDUG00000022230)	camk2d2 (ENSSDUG00000022245)	ENSSDUG00000022251	ENSSDUG00000022252	ENSSDUG00000022253	FBXO10 (ENSSDUG00000022257)	polr1e (ENSSDUG00000022279)	ZBTB5 (ENSSDUG00000022285)	grhprb (ENSSDUG00000022290)	UBA6 (ENSSDUG00000022297)	POLQ (ENSSDUG00000022307)	ENSSDUG00000022329
Barramundi perch	MODERN SPECIES	237	ENSLCAG00010027801	TYRP1 (ENSLCAG00010028014)	ENSLCAG00010028016	ADGRL3 (ENSLCAG00010028018)	gtf2e2 (ENSLCAG00010028020)	smim18 (ENSLCAG00010028021)	ENSLCAG00010028022	HGSNAT (ENSLCAG00010028023)	rbpja (ENSLCAG00010028024)	STIM2 (ENSLCAG00010028025)	ENSLCAG00010028026	ENSLCAG00010028027	ENSLCAG00010028028	ENSLCAG00010028029	crmp1 (ENSLCAG00010028030) #19	WFS1 (ENSLCAG00010028032) #22	ppp2r2ca (ENSLCAG00010028033) ##23	ENSLCAG00010028034	hpf1 (ENSLCAG00010028035)	ENSLCAG00010028036
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Tetraodontidae	ANCESTRAL SPECIES	40										ENSGT00990000203830	ENSGT00510000052596.b	ENSGT00510000052942	ENSGT00950000183012.A.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a	ENSGT00940000154889	ENSGT00940000159636
Fugu	MODERN SPECIES	8	ENSTRUG00000002790 ##37	RPS6KB2 (ENSTRUG00000003821)	ndufs8a (ENSTRUG00000004480)	saraf (ENSTRUG00000004686)	galnt7 (ENSTRUG00000004719)	ENSTRUG00000020693	spcs3 (ENSTRUG00000029852)	kdm2aa (ENSTRUG00000005339)	stx3a (ENSTRUG00000005789)	ENSTRUG00000029491	ENSTRUG00000026670	ENSTRUG00000023852	vps37c (ENSTRUG00000006049)	ENSTRUG00000006145	crmp1 (ENSTRUG00000006479) #19	WFS1 (ENSTRUG00000031502) #22	ppp2r2ca (ENSTRUG00000007774) ##23	hpf1 (ENSTRUG00000008016)	camk2d2 (ENSTRUG00000006806)	ENSTRUG00000006788	FBXO10 (ENSTRUG00000006555)	polr1e (ENSTRUG00000026301)	ZBTB5 (ENSTRUG00000006314)	grhprb (ENSTRUG00000031197)	UBA6 (ENSTRUG00000005340)	POLQ (ENSTRUG00000032650)	ENSTRUG00000004960	melk (ENSTRUG00000004362)	pax5 (ENSTRUG00000003227)	ENSTRUG00000028037	ENSTRUG00000026296
Tetraodon	MODERN SPECIES	10	dtd1 (ENSTNIG00000014159)	ENSTNIG00000014160	slkb (ENSTNIG00000014161)	stn1 (ENSTNIG00000014162)	SH3PXD2A (ENSTNIG00000014163)	neurl1aa (ENSTNIG00000014164)	ENSTNIG00000003748 ##37	RPS6KB2 (ENSTNIG00000017798)	ndufs8a (ENSTNIG00000001102)	ENSTNIG00000017799	ENSTNIG00000017800	vps37c (ENSTNIG00000017801)	ENSTNIG00000017802	ENSTNIG00000001129	crmp1 (ENSTNIG00000017803) #19	WFS1 (ENSTNIG00000017804) #22	ppp2r2ca (ENSTNIG00000017805) ##23	hpf1 (ENSTNIG00000017806)	ENSTNIG00000017808	ENSTNIG00000017807	camk2d2 (ENSTNIG00000017809)	ENSTNIG00000017810	FBXO10 (ENSTNIG00000017811)	polr1e (ENSTNIG00000017812)	ZBTB5 (ENSTNIG00000017813)	grhprb (ENSTNIG00000017814)	UBA6 (ENSTNIG00000017815)	ENSTNIG00000001676	ENSTNIG00000017816	ENSTNIG00000017817	ENSTNIG00000017818
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00910000148102	ENSGT00940000158694	ENSGT00940000165569
Ballan wrasse	MODERN SPECIES	173														ENSLBEG00000002513	crmp1 (ENSLBEG00000002546) #19	WFS1 (ENSLBEG00000002601) #22	ppp2r2ca (ENSLBEG00000002634) ##23	ENSLBEG00000002686	hpf1 (ENSLBEG00000002700)	ANK2 (ENSLBEG00000002737)	camk2d2 (ENSLBEG00000002901)	ENSLBEG00000002970	ENSLBEG00000003010	FBXO10 (ENSLBEG00000003040)	polr1e (ENSLBEG00000003104)	ZBTB5 (ENSLBEG00000003137)	grhprb (ENSLBEG00000003162)	UBA6 (ENSLBEG00000003194)	ENSLBEG00000003274	ENSLBEG00000003287	ENSLBEG00000003313
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000162559	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569
Perciformes	ANCESTRAL SPECIES	2	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00990000203806	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00980000198676	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a	ENSGT00940000154889
Stickleback	MODERN SPECIES	4	smdt1b (ENSGACG00000016011)	ENSGACG00000016012	ENSGACG00000016014	KCNJ4 (ENSGACG00000016015)	SOX10 (ENSGACG00000016017)	rnaseh2a (ENSGACG00000016019)	ENSGACG00000016023	ENSGACG00000016024	MAST1 (ENSGACG00000016026)	atg4da (ENSGACG00000016029)	SMARCA4 (ENSGACG00000016033)	ENSGACG00000016042	ENSGACG00000016044	ENSGACG00000016046	crmp1 (ENSGACG00000016047) #19	WFS1 (ENSGACG00000016048) #22	ppp2r2ca (ENSGACG00000016052) ##23	ENSGACG00000016055	ENSGACG00000016056	hpf1 (ENSGACG00000016057)	ANK2 (ENSGACG00000016063)	ENSGACG00000016073	camk2d2 (ENSGACG00000016075)	FBXO10 (ENSGACG00000016086)	polr1e (ENSGACG00000016087)	ZBTB5 (ENSGACG00000016092)	grhprb (ENSGACG00000016093)	UBA6 (ENSGACG00000016096)	POLQ (ENSGACG00000016100)	ENSGACG00000016107	ENSGACG00000016108
Lumpfish	MODERN SPECIES		smc2 (ENSCLMG00005001997)	ecpas (ENSCLMG00005001275)	kdm4c (ENSCLMG00005001264)	ENSCLMG00005000943	TYRP1 (ENSCLMG00005000925)	ENSCLMG00005000921	ADGRL3 (ENSCLMG00005000920)	smim18 (ENSCLMG00005000919)	gtf2e2 (ENSCLMG00005000918)	DCTN6 (ENSCLMG00005000917)	HGSNAT (ENSCLMG00005000902)	rbpja (ENSCLMG00005000865)	ENSCLMG00005000859	ENSCLMG00005000858	crmp1 (ENSCLMG00005000855) #19	WFS1 (ENSCLMG00005000842) #22	ppp2r2ca (ENSCLMG00005000837) ##23	hpf1 (ENSCLMG00005000835)	ENSCLMG00005000823	ENSCLMG00005000820	camk2d2 (ENSCLMG00005000488)	ENSCLMG00005000452	FBXO10 (ENSCLMG00005000443)	polr1e (ENSCLMG00005000434)	ZBTB5 (ENSCLMG00005000427)	grhprb (ENSCLMG00005000421)	UBA6 (ENSCLMG00005000338)	ENSCLMG00005000099	ENSCLMG00005000051	melk (ENSCLMG00005000042)	pax5 (ENSCLMG00005000023)
Perciformes_a	ANCESTRAL SPECIES		ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00410000029064	ENSGT00390000011749	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000160757	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Pike perch	MODERN SPECIES	69	ENSSLUG00000025842	TYRP1 (ENSSLUG00000025429)	hnrnpd (ENSSLUG00000025425)	ENSSLUG00000025422	ENSSLUG00000025416	ENSSLUG00000025413	ENSSLUG00000025412	smim18 (ENSSLUG00000025410)	gtf2e2 (ENSSLUG00000025406)	DCTN6 (ENSSLUG00000025399)	HGSNAT (ENSSLUG00000025391)	rbpja (ENSSLUG00000025378)	STIM2 (ENSSLUG00000025345)	ENSSLUG00000025328	crmp1 (ENSSLUG00000025211) #19	WFS1 (ENSSLUG00000025185) #22	ppp2r2ca (ENSSLUG00000025184) ##23	ENSSLUG00000025180	hpf1 (ENSSLUG00000025177)	ENSSLUG00000025165	ENSSLUG00000025157	ENSSLUG00000025153	camk2d2 (ENSSLUG00000024418)	ENSSLUG00000024221	ENSSLUG00000024216	FBXO10 (ENSSLUG00000024214)	polr1e (ENSSLUG00000024209)	ZBTB5 (ENSSLUG00000024206)	grhprb (ENSSLUG00000024200)	UBA6 (ENSSLUG00000024163)	POLQ (ENSSLUG00000024045)
Channel bull blenny	MODERN SPECIES		smc2 (ENSCGOG00000016701)	ecpas (ENSCGOG00000016277)	ENSCGOG00000016252	ENSCGOG00000003397	TYRP1 (ENSCGOG00000003047)	ENSCGOG00000003030	ADGRL3 (ENSCGOG00000001017)	smim18 (ENSCGOG00000000954)	gtf2e2 (ENSCGOG00000000950)	DCTN6 (ENSCGOG00000000927)	ENSCGOG00000000921	rbpja (ENSCGOG00000000823)	STIM2 (ENSCGOG00000000558)	ENSCGOG00000000437	crmp1 (ENSCGOG00000000289) #19	WFS1 (ENSCGOG00000000176) #22	ppp2r2ca (ENSCGOG00000000122) ##23	ENSCGOG00000000076	hpf1 (ENSCGOG00000023505)	ENSCGOG00000021379	camk2d2 (ENSCGOG00000016254)	ENSCGOG00000016095	ENSCGOG00000016071	polr1e (ENSCGOG00000015973)	ZBTB5 (ENSCGOG00000015972)	grhprb (ENSCGOG00000015954)	UBA6 (ENSCGOG00000013976)	POLQ (ENSCGOG00000013803)	ENSCGOG00000013779	ENSCGOG00000013775	ENSCGOG00000013771
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000162559	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00940000153612.A	ENSGT00940000166168	ENSGT00940000153617.C.f	ENSGT00940000155804.k.b	ENSGT00940000155586.A	ENSGT00940000155527.j.b	ENSGT00390000011749	ENSGT00410000029064	ENSGT00390000017890.b.a	ENSGT00390000001491.a	ENSGT00390000005197.a.bb.a	ENSGT00390000000214.a.b.l	ENSGT00400000023727.b	ENSGT00940000165832	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b	ENSGT00940000162559	ENSGT00940000175443	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000158694	ENSGT00940000165569	ENSGT00940000167725.a
European seabass	MODERN SPECIES	20	smc2 (ENSDLAG00005014443)	ENSDLAG00005014517	ENSDLAG00005015624	ENSDLAG00005015926	ENSDLAG00005022973	ENSDLAG00005022999	ENSDLAG00005023107	ENSDLAG00005024835	SMIM18 (ENSDLAG00005024842)	ENSDLAG00005030887	ENSDLAG00005024854	rbpja (ENSDLAG00005024887)	ENSDLAG00005024913	ENSDLAG00005024916	crmp1 (ENSDLAG00005024927) #19	WFS1 (ENSDLAG00005029500) #22	ppp2r2ca (ENSDLAG00005031161) ##23	ENSDLAG00005025024	hpf1 (ENSDLAG00005025041)	ENSDLAG00005025100	camk2d2 (ENSDLAG00005032299)	ENSDLAG00005014206	FBXO10 (ENSDLAG00005025905)	ENSDLAG00005025906	ZBTB5 (ENSDLAG00005033499)	ENSDLAG00005025909	ENSDLAG00005025923	ENSDLAG00005025975	ENSDLAG00005025998	ENSDLAG00005026010	ENSDLAG00005029745
Large yellow croaker	MODERN SPECIES	481	ecpas (ENSLCRG00005012572)	kdm4c (ENSLCRG00005012860)	ENSLCRG00005012949	TYRP1 (ENSLCRG00005014121)	ENSLCRG00005014151	ADGRL3 (ENSLCRG00005014203)	gtf2e2 (ENSLCRG00005017199)	smim18 (ENSLCRG00005017201)	ENSLCRG00005017204	ENSLCRG00005017247	rbpja (ENSLCRG00005017286)	STIM2 (ENSLCRG00005017288)	ENSLCRG00005017291	ENSLCRG00005017292	crmp1 (ENSLCRG00005017311) #19	WFS1 (ENSLCRG00005020444) #22	ppp2r2ca (ENSLCRG00005020446) ##23	ENSLCRG00005020451	hpf1 (ENSLCRG00005020456)	ENSLCRG00005020483	camk2d2 (ENSLCRG00005022490)	ENSLCRG00005022995	CXCL8 (ENSLCRG00005022997)	polr1e (ENSLCRG00005022998)	UBA6 (ENSLCRG00005023013)	POLQ (ENSLCRG00005023449)	abcd3a (ENSLCRG00005023539)	f3a (ENSLCRG00005023653)	cnn3b (ENSLCRG00005023655)	STEAP2 (ENSLCRG00005002394)	mos (ENSLCRG00005002399)
Gilthead seabream	MODERN SPECIES		ENSSAUG00010023740	TYRP1 (ENSSAUG00010023675)	ENSSAUG00010023668	ADGRL3 (ENSSAUG00010021014)	smim18 (ENSSAUG00010020991)	gtf2e2 (ENSSAUG00010020988)	DCTN6 (ENSSAUG00010020983)	ENSSAUG00010020981	rbpja (ENSSAUG00010020951)	STIM2 (ENSSAUG00010020885)	ENSSAUG00010020883	ENSSAUG00010020881	ENSSAUG00010020880	ENSSAUG00010020879	crmp1 (ENSSAUG00010020754) #19	WFS1 (ENSSAUG00010020749) #22	ppp2r2ca (ENSSAUG00010020748) ##23	ENSSAUG00010020746	hpf1 (ENSSAUG00010020745)	ENSSAUG00010010856	camk2d2 (ENSSAUG00010006026)	ENSSAUG00010005953	ENSSAUG00010005949	FBXO10 (ENSSAUG00010005945)	polr1e (ENSSAUG00010005942)	ZBTB5 (ENSSAUG00010005938)	grhprb (ENSSAUG00010005932)	UBA6 (ENSSAUG00010004997)	POLQ (ENSSAUG00010004084)	ENSSAUG00010003715	ENSSAUG00010003691
Tiger tail seahorse	MODERN SPECIES	518	ENSHCOG00000015311	ecpas (ENSHCOG00000015292)	kdm4c (ENSHCOG00000015229)	ENSHCOG00000015136	TYRP1 (ENSHCOG00000015079)	ENSHCOG00000015042	ADGRL3 (ENSHCOG00000014889)	ENSHCOG00000014214	gtf2e2 (ENSHCOG00000014209)	DCTN6 (ENSHCOG00000014195)	ENSHCOG00000014189	STIM2 (ENSHCOG00000014160)	ENSHCOG00000013791	ENSHCOG00000013764	crmp1 (ENSHCOG00000013745) #19	WFS1 (ENSHCOG00000013705) #22	ppp2r2ca (ENSHCOG00000013679) ##23	hpf1 (ENSHCOG00000013653)	ENSHCOG00000013648	ANK2 (ENSHCOG00000013635)
Pinecone sodierfish	MODERN SPECIES		ENSMMDG00005008314	gtf2e2 (ENSMMDG00005008318)	smim18 (ENSMMDG00005008323)	ENSMMDG00005008328	ENSMMDG00005008335	rbpja (ENSMMDG00005008348)	STIM2 (ENSMMDG00005008421)	ENSMMDG00005008425	ENSMMDG00005008437	ENSMMDG00005008446	ENSMMDG00005008476	ENSMMDG00005008483	ENSMMDG00005008494	ITLN1 (ENSMMDG00005008500)	crmp1 (ENSMMDG00005008507) #19	WFS1 (ENSMMDG00005008511) #22	ppp2r2ca (ENSMMDG00005008515) ##23	ENSMMDG00005008519	hpf1 (ENSMMDG00005008525)	ENSMMDG00005008531	ENSMMDG00005008691	ENSMMDG00005008695	ENSMMDG00005008698	casp6a (ENSMMDG00005008699)	ENSMMDG00005008700	lef1 (ENSMMDG00005008705)	hadh (ENSMMDG00005008710)	cyp2u1 (ENSMMDG00005008716)	sgms2a (ENSMMDG00005008725)	papss1 (ENSMMDG00005008865)	dkk2 (ENSMMDG00005009215)
Cod	MODERN SPECIES	16	ENSGMOG00000025924	SMIM18 (ENSGMOG00000005036)	GTF2E2 (ENSGMOG00000005020)	DCTN6 (ENSGMOG00000005001)	ENSGMOG00000004969	rbpja (ENSGMOG00000004951)	ENSGMOG00000004792	ENSGMOG00000000689	ENSGMOG00000031805	ENSGMOG00000026775	ENSGMOG00000034682	ENSGMOG00000025853	ENSGMOG00000025268	ENSGMOG00000033539	ENSGMOG00000009655	ENSGMOG00000006707 #22	ENSGMOG00000006725 ##23	ENSGMOG00000006737	ENSGMOG00000006752	ENSGMOG00000031371	ENSGMOG00000006820	ENSGMOG00000019104	ENSGMOG00000019021	ENSGMOG00000019006	ENSGMOG00000018985	hand2 (ENSGMOG00000033700)	fbxo8 (ENSGMOG00000001920)	ENSGMOG00000030231	cep44 (ENSGMOG00000001932)	hpgd (ENSGMOG00000001937)	glra3 (ENSGMOG00000005468)
Protacanthopterygii	ANCESTRAL SPECIES	131															ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00390000018004	ENSGT00940000160246.c.a	ENSGT00940000165381	ENSGT00940000158826	ENSGT00940000165569	ENSGT00940000167725.a	ENSGT00940000167725.b	ENSGT00940000154889	ENSGT00940000159636	ENSGT00950000183041.B.g	ENSGT00940000156247	ENSGT00940000157949	ENSGT00940000157456	ENSGT00390000010054.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1331															ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c.a #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23
Huchen	MODERN SPECIES	8664														ENSHHUG00000010871 #22	ENSHHUG00000010869	WFS1 (ENSHHUG00000010866) #22
Salmoninae_a	ANCESTRAL SPECIES	173														ENSGT00940000155279.C.a.b	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c.a #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00390000010434.a	ENSGT00940000159570.a.c	ENSGT00940000159570.a.d.a	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b.b	ENSGT00940000164407.a.a.h	ENSGT00390000015863.g.b.b	ENSGT00940000160151.c	ENSGT00950000183177.a.b.b
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	127																ENSGT00390000016928.c.a.a #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.d ##23	ENSGT00390000010434.a	ENSGT00940000159570.a.c	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b.b	ENSGT00940000164407.a.a.h	ENSGT00390000015863.g.b.b	ENSGT00940000160151.c	ENSGT00950000183177.a.b.b	ENSGT00940000157580.a.b	ENSGT00940000162193	ENSGT00550000074857.db	ENSGT00940000153612.A	ENSGT00940000166168
Oncorhynchus_a	ANCESTRAL SPECIES	277																ENSGT00390000016928.c.a.a #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.d ##23	ENSGT00390000010434.a	ENSGT00940000159570.a.c	ENSGT00940000156391.d	ENSGT00940000165038.a	ENSGT00940000162580.b.b.a
Coho salmon	MODERN SPECIES	1230														ENSOKIG00005027946	ENSOKIG00005027959	WFS1 (ENSOKIG00005027969) #22	PPP2R2C (ENSOKIG00005027982) ##23	ENSOKIG00005028013	htra3a (ENSOKIG00005028166)	CPZ (ENSOKIG00005028338)	ENSOKIG00005028351	hmx4 (ENSOKIG00005028369)	hmx1 (ENSOKIG00005028374)	ENSOKIG00005028386	ENSOKIG00005028398	ENSOKIG00005028409	ENSOKIG00005028419	adra2c (ENSOKIG00005028435)
Chinook salmon	MODERN SPECIES	1523																ENSOTSG00005032341 #22
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000058536	ENSOMYG00000035560	ENSOMYG00000051083	ENSOMYG00000076267	ENSOMYG00000074933	ENSOMYG00000008708	ENSOMYG00000023940	ENSOMYG00000058262	ENSOMYG00000058719	ENSOMYG00000023131	ENSOMYG00000039495	ENSOMYG00000055605	ENSOMYG00000063322	crmp1 (ENSOMYG00000072617) #19	ENSOMYG00000050368	WFS1 (ENSOMYG00000053838) #22	ENSOMYG00000065561	ppp2r2ca (ENSOMYG00000062708) ##23	ENSOMYG00000053096	htra3a (ENSOMYG00000068166)	ENSOMYG00000072238	ENSOMYG00000038539	hmx4 (ENSOMYG00000062701)	hmx1 (ENSOMYG00000008371)	ENSOMYG00000039586	ENSOMYG00000031500	adra2c (ENSOMYG00000025492)	ENSOMYG00000026365	ENSOMYG00000054200	lrpap1 (ENSOMYG00000060000)	ENSOMYG00000056092
Oncorhynchus	ANCESTRAL SPECIES	345														ENSGT00940000155279.C.a.b	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c.a.b #22
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000035350	ENSOMYG00000064847	ENSOMYG00000062865	ENSOMYG00000035509	ENSOMYG00000039812	ENSOMYG00000028522	ENSOMYG00000039903	ENSOMYG00000059643	ENSOMYG00000061100	ENSOMYG00000056774	ENSOMYG00000077125	ENSOMYG00000053975	ENSOMYG00000073641	ENSOMYG00000064941	crmp1 (ENSOMYG00000071801) #19	WFS1 (ENSOMYG00000055857) #22	ENSOMYG00000023291	ppp2r2ca (ENSOMYG00000055367) ##23	PPP2R2C (ENSOMYG00000057678) ##23	ENSOMYG00000062543	ENSOMYG00000058612	htra3a (ENSOMYG00000067195)	ENSOMYG00000038353	hmx4 (ENSOMYG00000077379)	hmx1 (ENSOMYG00000023066)	ENSOMYG00000077448	ENSOMYG00000010094	ENSOMYG00000063184	adra2c (ENSOMYG00000072596)	ENSOMYG00000068654	lrpap1 (ENSOMYG00000068566)
Salmo	ANCESTRAL SPECIES	162							ENSGT00940000154889.f.a.b	ENSGT00940000167725.a	ENSGT00940000165569.e.b.a	ENSGT00940000158826	ENSGT00940000165381	ENSGT00940000160246.c.a	ENSGT00390000018004.h	ENSGT00940000155279.C.a.b.s	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c.a #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00390000010434.a	ENSGT00940000159570.a.d.a	ENSGT00940000156391.d	ENSGT00940000162580.b.b.a	ENSGT00940000165038.a	ENSGT00940000162580.b.b.b	ENSGT00390000015863.g.b.a.b.b.b	ENSGT00940000160151.c	ENSGT00950000183177.a.b.b
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000100018	ENSSSAG00000112832	ENSSSAG00000112441	ENSSSAG00000116965	ENSSSAG00000116029	ENSSSAG00000094789	ENSSSAG00000037607	ENSSSAG00000041821	ENSSSAG00000028271	ENSSSAG00000097209	ENSSSAG00000097053	ENSSSAG00000109999	ENSSSAG00000104846	ENSSSAG00000101562	crmp1 (ENSSSAG00000096973) #19	WFS1 (ENSSSAG00000099359) #22	ppp2r2ca (ENSSSAG00000108059) ##23	ENSSSAG00000098343	htra3a (ENSSSAG00000085109)	ENSSSAG00000040221	hmx1 (ENSSSAG00000087233)	ENSSSAG00000003226	ENSSSAG00000116469	ENSSSAG00000082642	ENSSSAG00000121161	adra2c (ENSSSAG00000097638)	ENSSSAG00000083517	ENSSSAG00000015770	ENSSSAG00000003626	ENSSSAG00000104862	ENSSSAG00000109179
Atlantic salmon	MODERN SPECIES	27	ENSSSAG00000094097	ENSSSAG00000115706	ENSSSAG00000111406	ENSSSAG00000076386	ENSSSAG00000094862	ENSSSAG00000082335	ENSSSAG00000060830	ENSSSAG00000106363	ENSSSAG00000114900	ENSSSAG00000086954	ENSSSAG00000116044	ENSSSAG00000119439	ENSSSAG00000119782	ENSSSAG00000081949	crmp1 (ENSSSAG00000118926) #19	WFS1 (ENSSSAG00000106477) #22	ppp2r2ca (ENSSSAG00000106605) ##23	ENSSSAG00000040449	ENSSSAG00000084545	htra3a (ENSSSAG00000118550)	ENSSSAG00000041467	hmx4 (ENSSSAG00000103429)	hmx1 (ENSSSAG00000024566)	ENSSSAG00000098047	adra2c (ENSSSAG00000113771)	ENSSSAG00000111039	ENSSSAG00000106014	ENSSSAG00000003247	ENSSSAG00000105823	lrpap1 (ENSSSAG00000061232)	DOK7 (ENSSSAG00000090424)
River trout	DUPLICATION
River trout	MODERN SPECIES	272															WFS1 (ENSSTUG00000026515) #22	WFS1 (ENSSTUG00000026406) #22	ENSSTUG00000026386 ##23	ppp2r2ca (ENSSTUG00000026369) ##23	pi4k2b (ENSSTUG00000024970)
River trout	MODERN SPECIES	272																WFS1 (ENSSTUG00000026515) #22	WFS1 (ENSSTUG00000026406) #22	ENSSTUG00000026386 ##23	ppp2r2ca (ENSSTUG00000026369) ##23	pi4k2b (ENSSTUG00000024970)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00390000016928.c.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00390000016928.c.b #22
Oncorhynchus	ANCESTRAL SPECIES	492																ENSGT00390000016928.c.b #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.c ##23
Oncorhynchus_a	ANCESTRAL SPECIES	394														ENSGT00940000155279.C.a.b	ENSGT01030000234527.A.a.b.b.b #19	ENSGT00390000016928.c.b #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.c ##23
Coho salmon	MODERN SPECIES	36	RAB33B (ENSOKIG00005043544)	elf2b (ENSOKIG00005043556)	NOCT (ENSOKIG00005043631)	ENSOKIG00005043717	NOCT (ENSOKIG00005043798)	ENSOKIG00005043845	TYRP1 (ENSOKIG00005043867)	ENSOKIG00005043970	exosc9 (ENSOKIG00005043978)	ENSOKIG00005043992	ENSOKIG00005044009	ENSOKIG00005044034	ENSOKIG00005044058	ENSOKIG00005024252	crmp1 (ENSOKIG00005024805) #19	WFS1 (ENSOKIG00005024832) #22	ppp2r2ca (ENSOKIG00005024979) ##23	PI4K2B (ENSOKIG00005024998)	CPZ (ENSOKIG00005025279)	ENSOKIG00005025350	hmx4 (ENSOKIG00005025373)	hmx1 (ENSOKIG00005025385)	ENSOKIG00005025396	ENSOKIG00005025415	ENSOKIG00005025437	lrpap1 (ENSOKIG00005025473)	ENSOKIG00005025563	ENSOKIG00005025580	ENSOKIG00005025591	ENSOKIG00005025642	ecpas (ENSOKIG00005025912)
Huchen	MODERN SPECIES	8664														WFS1 (ENSHHUG00000010866) #22	ENSHHUG00000010869	ENSHHUG00000010871 #22
Northern pike	MODERN SPECIES	24	ENSELUG00000009396	DOK7 (ENSELUG00000009340)	lrpap1 (ENSELUG00000009311)	ENSELUG00000031454	adra2c (ENSELUG00000009236)	ENSELUG00000009204	ENSELUG00000009173	ENSELUG00000009098	hmx4 (ENSELUG00000009080)	ENSELUG00000030407	CPZ (ENSELUG00000009062)	GPR78 (ENSELUG00000009003)	htra3a (ENSELUG00000008972)	pi4k2b (ENSELUG00000008919)	crmp1 (ENSELUG00000008856) #19	WFS1 (ENSELUG00000008770) #22	ppp2r2ca (ENSELUG00000008748) ##23	ENSELUG00000008690	ENSELUG00000008333	ENSELUG00000024950	ENSELUG00000030382	ENSELUG00000008505	ENSELUG00000008318	zgc:56493 (ENSELUG00000025840)	FBXO10 (ENSELUG00000008239)	ENSELUG00000029535	polr1e (ENSELUG00000008150)	ENSELUG00000024797	ZBTB5 (ENSELUG00000008095)	grhprb (ENSELUG00000008069)	UBA6 (ENSELUG00000007992)
Otomorpha	ANCESTRAL SPECIES	256	ENSGT00950000183001.b.b.a	ENSGT00940000159570.a	ENSGT00390000010434.a	ENSGT00390000001491.a	ENSGT00940000165832	ENSGT00400000023727	ENSGT00390000000214.a.b.l	ENSGT00390000005197.a.bb.a	ENSGT00950000183177.a.b.b	ENSGT00530000063690.a.a	ENSGT00390000003601.b	ENSGT01060000248860	ENSGT00940000163443.m.b	ENSGT00940000155857.e	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000159769.a.b
Clupeiformes	ANCESTRAL SPECIES	22	ENSGT00940000165038.a	ENSGT00940000156391.d	ENSGT00950000183001.b.b.a	ENSGT00940000159570.a	ENSGT00390000010434.a	ENSGT00390000001491.a	ENSGT00940000165832	ENSGT00390000000214.a.b.l	ENSGT00390000005197.a.bb.a.d	ENSGT00950000183177.a.b.b	ENSGT00530000063690.a.a	ENSGT00390000003601.b	ENSGT00940000163443.m.b	ENSGT00940000155857.e	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g	ENSGT00390000014876	ENSGT00940000155279.C.a.b	ENSGT00940000154259.b.b.c	ENSGT00940000154810	ENSGT00940000162502.a	ENSGT00940000157807.g.b	ENSGT00390000013973.A.a.c.b.a	ENSGT00390000008711.h	ENSGT00940000165823	ENSGT00940000168028	ENSGT00390000017284.a.b.d	ENSGT00940000155980.B	ENSGT01030000234601.p
Atlantic herring	MODERN SPECIES	14	TBC1D1 (ENSCHAG00000005502)	pgm2 (ENSCHAG00000001487)	sh3glb1b (ENSCHAG00000000980)	selenoj (ENSCHAG00000000792)	ENSCHAG00000000711	cryz (ENSCHAG00000000541)	STIM2 (ENSCHAG00000027421)	rbpja (ENSCHAG00000027398)	slc34a2a (ENSCHAG00000027347)	ENSCHAG00000027339	chic2 (ENSCHAG00000027334)	fip1l1b (ENSCHAG00000027328)	ENSCHAG00000027325	ENSCHAG00000027321	crmp1 (ENSCHAG00000026792) #19	WFS1 (ENSCHAG00000026739) #22	ppp2r2ca (ENSCHAG00000026727) ##23	ENSCHAG00000026718	hpf1 (ENSCHAG00000026715)	ANK2 (ENSCHAG00000024230)	camk2d2 (ENSCHAG00000022862)	ENSCHAG00000022769	ENSCHAG00000022728	ENSCHAG00000022671	ENSCHAG00000022530	ENSCHAG00000022514	ENSCHAG00000022455	ENSCHAG00000022442	zgc:56493 (ENSCHAG00000022428)	ENSCHAG00000022409	faah2a (ENSCHAG00000022384)
Denticle herring	MODERN SPECIES	14	hmx4 (ENSDCDG00000027983)	CPZ (ENSDCDG00000027994)	CPZ (ENSDCDG00000028117)	adra2c (ENSDCDG00000028185)	ENSDCDG00000028188	pi4k2b (ENSDCDG00000028190)	HGSNAT (ENSDCDG00000028196)	ENSDCDG00000028201	ENSDCDG00000028226	rbpja (ENSDCDG00000028970)	slc34a2a (ENSDCDG00000028976)	ENSDCDG00000029043	chic2 (ENSDCDG00000029045)	fip1l1b (ENSDCDG00000029051)	crmp1 (ENSDCDG00000029099) #19	WFS1 (ENSDCDG00000030362) #22	ppp2r2ca (ENSDCDG00000030366) ##23	ENSDCDG00000030369	hpf1 (ENSDCDG00000000208)	ANK2 (ENSDCDG00000001137)	camk2d2 (ENSDCDG00000018215)	ENSDCDG00000025448	ENSDCDG00000025453	zgc:56493 (ENSDCDG00000025458)	ptgr1.1 (ENSDCDG00000025466)	faah2a (ENSDCDG00000025485)	TESK1 (ENSDCDG00000025497)	ENSDCDG00000025510	ENSDCDG00000025516	ENSDCDG00000025530	paip2b (ENSDCDG00000025561)
Otophysi	ANCESTRAL SPECIES	266							ENSGT00390000010434.a	ENSGT00390000001491.a	ENSGT00940000165832	ENSGT00400000023727	ENSGT00390000000214.a.b.l	ENSGT00390000005197.a.bb.a	ENSGT00950000183177.a.b.b	ENSGT00940000155857.e	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g	ENSGT01030000234940	ENSGT00940000159769.a.b	ENSGT00940000155279.C.a.b	ENSGT00390000014876	ENSGT00940000154953.b	ENSGT00940000155249.g	ENSGT00940000156295.g	ENSGT00940000158277.b	ENSGT00390000006284	ENSGT00730000111168
Characiphysae	ANCESTRAL SPECIES	249													ENSGT00970000197745	ENSGT00980000202967	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g
Channel catfish	MODERN SPECIES	21						PCDH18 (ENSIPUG00000021864)	ELF2 (ENSIPUG00000021874)	camk2d2 (ENSIPUG00000021900)	ENSIPUG00000021962	ENSIPUG00000021974	ENSIPUG00000021988	ENSIPUG00000021999	ENSIPUG00000022005	cd027 (ENSIPUG00000022024)	ENSIPUG00000022052	WFS1 (ENSIPUG00000022056) #22	ppp2r2ca (ENSIPUG00000022060) ##23	ENSIPUG00000022070	ENSIPUG00000022098	ENSIPUG00000022117	ENSIPUG00000022137	ENSIPUG00000022144	ENSIPUG00000022152	pi4k2b (ENSIPUG00000022169)	SCLT1 (ENSIPUG00000022180)	zgc:77739 (ENSIPUG00000022198)	pcdh10a (ENSIPUG00000022205)	ENSIPUG00000022209	clta (ENSIPUG00000022214)	nansa (ENSIPUG00000022220)	gne (ENSIPUG00000022255)
Characiphysae_b	ANCESTRAL SPECIES	168	ENSGT00940000154757.rb	ENSGT00390000001491.a	ENSGT00390000010434.a	ENSGT00730000111168	ENSGT00390000006284	ENSGT00940000158277.b.a.a	ENSGT00940000156295.g	ENSGT00940000154953.b	ENSGT00390000014876.a	ENSGT00940000155279.C.a.b.eb	ENSGT00940000159769.a.b	ENSGT01030000234940	ENSGT00970000197745	ENSGT00980000202967	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g
Characoidei	ANCESTRAL SPECIES	169	ENSGT00940000154757.rb.a.b	ENSGT00390000001491.a	ENSGT00390000010434.a	ENSGT00730000111168	ENSGT00390000006284	ENSGT00940000158277.b.a.a	ENSGT00940000156295.g	ENSGT00940000154953.b	ENSGT00390000014876.a	ENSGT00940000155279.C.a.b.eb	ENSGT00940000159769.a.b	ENSGT01030000234940	ENSGT00970000197745	ENSGT00980000202967	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g
Red-bellied piranha	MODERN SPECIES	1094													ENSPNAG00000008591	ENSPNAG00000008584	crmp1 (ENSPNAG00000008577) #19	WFS1 (ENSPNAG00000001088) #22	ppp2r2ca (ENSPNAG00000001080) ##23	ENSPNAG00000008536
Mexicana tetra	MODERN SPECIES	13	odam (ENSAMXG00000037617)	scpp9 (ENSAMXG00000039551)	ENSAMXG00000035031	ENSAMXG00000038073	RPS6KB2 (ENSAMXG00000004056)	hpf1 (ENSAMXG00000034213)	ENSAMXG00000030810	ENSAMXG00000030369	ENSAMXG00000030781	ENSAMXG00000039785	camk2d2 (ENSAMXG00000004004)	ENSAMXG00000035755	ENSAMXG00000038972	ENSAMXG00000032032	crmp1 (ENSAMXG00000003990) #19	WFS1 (ENSAMXG00000003978) #22
Electric eel	MODERN SPECIES	561						hpf1 (ENSEEEG00000008220)	ENSEEEG00000008219	ENSEEEG00000008218	ENSEEEG00000008217	ENSEEEG00000008216	camk2d2 (ENSEEEG00000008204)	ENSEEEG00000008201	ENSEEEG00000008200	ENSEEEG00000008199	crmp1 (ENSEEEG00000008198) #19	WFS1 (ENSEEEG00000008196) #22	ppp2r2ca (ENSEEEG00000008195) ##23	ENSEEEG00000008194
Cyprinoidei	ANCESTRAL SPECIES	55	ENSGT00950000183079.A.b.c.a.a	ENSGT00940000158380.b	ENSGT00390000012030.b.b	ENSGT00940000157146.a.b	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00390000010434.a	ENSGT00390000001491.a	ENSGT00940000165832	ENSGT00400000023727	ENSGT00940000163467.a.b.b.b.a.b	ENSGT00390000000214.a.b.l	ENSGT00390000005197.a.bb.a	ENSGT00950000183177.a.b.b	ENSGT00940000155857.e	ENSGT01030000234527.A.a.b.b.b.e #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ##23	ENSGT00940000155475.g	ENSGT01030000234940	ENSGT00940000159769.a.b	ENSGT00940000155279.C.a.b	ENSGT00390000014876	ENSGT00940000154953.b	ENSGT00940000155249.g	ENSGT00940000156295.g	ENSGT00940000158277.b	ENSGT00390000006284	ENSGT00730000111168	ENSGT00940000157347	ENSGT00390000011081.q.a	ENSGT00390000017246
Cyprininae	ANCESTRAL SPECIES	34	ENSGT00940000157146.a.b.g.a	ENSGT00950000183061.a.a.a.a.a.a.b.l	ENSGT00390000010434.a.b	ENSGT00390000001491.a.b	ENSGT00940000165832.b	ENSGT00400000023727.f	ENSGT00940000163467.a.b.b.b.a.b.b.b	ENSGT00390000000214.a.b.l.a	ENSGT00390000005197.a.bb.a.a	ENSGT00950000183177.a.b.b.a	ENSGT00530000063690.a.a.s.b	ENSGT00390000003601.b.c.b	ENSGT00940000162578.sc.a.a	ENSGT00940000157037.a.c.b	ENSGT01030000234527.A.a.b.b.b.e.a #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e.b ##23	ENSGT00940000155475.g	ENSGT01030000234940.d	ENSGT00940000159769.a.b.a	ENSGT00940000155279.C.a.b.y	ENSGT00390000014876.d	ENSGT00940000154953.b.f	ENSGT00940000155249.g.b	ENSGT00940000156295.g.b	ENSGT00940000158277.b.c	ENSGT00390000006284.b	ENSGT00730000111168.a	ENSGT00940000157347.h	ENSGT00390000011081.q.a.b	ENSGT00390000017246.e
Goldfish	MODERN SPECIES	18	ENSCARG00000015579	camk2d2 (ENSCARG00000015249)	ENSCARG00000015207	ENSCARG00000015203	ENSCARG00000015183	ENSCARG00000015174	ENSCARG00000015166	ENSCARG00000015145	ENSCARG00000014973	rbpja (ENSCARG00000014901)	slc34a2a (ENSCARG00000014876)	ENSCARG00000014865	chic2 (ENSCARG00000014847)	fip1l1b (ENSCARG00000014818)	crmp1 (ENSCARG00000014497) #19	WFS1 (ENSCARG00000014459) #22	ppp2r2ca (ENSCARG00000067647) ##23	pudp (ENSCARG00000067609)	nlgn4xa (ENSCARG00000067524)	PRKX (ENSCARG00000067496)	MXRA5 (ENSCARG00000067477)	gyg2 (ENSCARG00000067457)	cd99 (ENSCARG00000067439)	ENSCARG00000067434	DHRSX (ENSCARG00000067422)	creb1a (ENSCARG00000067396)	chmp2bb (ENSCARG00000067378)	ENSCARG00000067369	ENSCARG00000067356	cldng (ENSCARG00000067351)	ENSCARG00000067344
Cyprininae_a	ANCESTRAL SPECIES	49	ENSGT00940000157146.a.b.g.a	ENSGT00950000183061.a.a.a.a.a.a.b.l	ENSGT00390000010434.a.b	ENSGT00390000001491.a.b	ENSGT00940000165832.b	ENSGT00400000023727.f.a	ENSGT00940000163467.a.b.b.b.a.b.b.b	ENSGT00390000000214.a.b.l.a	ENSGT00390000005197.a.bb.a.a	ENSGT00950000183177.a.b.b.a	ENSGT00530000063690.a.a.s.b	ENSGT00390000003601.b.c.b	ENSGT00940000162578.sc.a.a	ENSGT00940000157037.a.c.b	ENSGT01030000234527.A.a.b.b.b.e.a #19	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e.b ##23	ENSGT00940000155475.g	ENSGT01030000234940.d	ENSGT00940000159769.a.b.a	ENSGT00940000159769.b	ENSGT00940000155279.C.a.b.y	ENSGT00390000014876.d	ENSGT00940000154953.b.f	ENSGT00940000155249.g.b	ENSGT00940000156295.g.b	ENSGT00940000158277.b.c	ENSGT00390000006284.b	ENSGT00730000111168.a	ENSGT00940000157347.h	ENSGT00390000011081.q.a.b
Common carp reference	MODERN SPECIES	27	SGCZ (ENSCCRG00000043806)	DLC1 (ENSCCRG00000035479)	pi4k2b (ENSCCRG00000023875)	ENSCCRG00000031623	ENSCCRG00000059596	ENSCCRG00000066133	ENSCCRG00000055036	ENSCCRG00000013123	rbpja (ENSCCRG00000061797)	slc34a2a (ENSCCRG00000013167)	ENSCCRG00000067877	chic2 (ENSCCRG00000013261)	fip1l1b (ENSCCRG00000058893)	ENSCCRG00000058830	crmp1 (ENSCCRG00000004057) #19	WFS1 (ENSCCRG00000042271) #22	ppp2r2ca (ENSCCRG00000074721) ##23	ENSCCRG00000041832	ENSCCRG00000028861	camk2d2 (ENSCCRG00000060910)	ENSCCRG00000003798	hpf1 (ENSCCRG00000014208)	elf2b (ENSCCRG00000014216)	NOCT (ENSCCRG00000075894)	ENSCCRG00000053031	ENSCCRG00000067476	pcdh18a (ENSCCRG00000077542)	pcdh10a (ENSCCRG00000054720)	zgc:77739 (ENSCCRG00000032838)	SCLT1 (ENSCCRG00000032852)	clta (ENSCCRG00000057399)
Golden-line barbel	MODERN SPECIES	24	b3gnt5a (ENSSGRG00000051440)	ect2 (ENSSGRG00000051452)	ENSSGRG00000051689	ENSSGRG00000051690	nlgn1 (ENSSGRG00000051692)	ENSSGRG00000051696	ENSSGRG00000051697	ENSSGRG00000051702	rbpja (ENSSGRG00000051752)	slc34a2a (ENSSGRG00000051753)	ENSSGRG00000051756	ENSSGRG00000051758	ENSSGRG00000051759	ENSSGRG00000051762	crmp1 (ENSSGRG00000051777) #19	WFS1 (ENSSGRG00000052237) #22	ppp2r2ca (ENSSGRG00000052240) ##23	ENSSGRG00000052243	ENSSGRG00000052245	ENSSGRG00000052268	ENSSGRG00000052545	hpf1 (ENSSGRG00000053975)	elf2b (ENSSGRG00000000075)	NOCT (ENSSGRG00000000085)	pcdh18a (ENSSGRG00000000090)	zgc:77739 (ENSSGRG00000000103)	SCLT1 (ENSSGRG00000000139)	clta (ENSSGRG00000000297)	ENSSGRG00000000367	cplx2l (ENSSGRG00000000374)	tdrd7a (ENSSGRG00000000386)
Zebrafish	MODERN SPECIES		HGSNAT (ENSDARG00000077804)	itln1 (ENSDARG00000007534)	ENSDARG00000078898	ENSDARG00000113383	ENSDARG00000039063	ENSDARG00000110922	ENSDARG00000109597	ENSDARG00000074867	rbpja (ENSDARG00000003398)	slc34a2a (ENSDARG00000012903)	ENSDARG00000056677	chic2 (ENSDARG00000022690)	fip1l1b (ENSDARG00000070431)	DRD5 (ENSDARG00000037576)	crmp1 (ENSDARG00000056742) #19	WFS1 (ENSDARG00000062341) #22	ppp2r2ca (ENSDARG00000056797) ##23	ENSDARG00000056806	ENSDARG00000104795	camk2d2 (ENSDARG00000014273)	ENSDARG00000009026	hpf1 (ENSDARG00000057114)	elf2b (ENSDARG00000079626)	NOCT (ENSDARG00000078525)	pcdh18a (ENSDARG00000089805)	ENSDARG00000102339	pcdh10a (ENSDARG00000099729)	C1H4orf33 (ENSDARG00000017985)	SCLT1 (ENSDARG00000057248)	clta (ENSDARG00000045618)	nansa (ENSDARG00000045620)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	89	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00940000166785	ENSGT00390000016928.c.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.b #23	ENSGT01030000234638.b.a.b #24	ENSGT00940000162871 #28	ENSGT00390000018549 #31	ENSGT00940000157250 #32	ENSGT01100000263482.F	ENSGT01100000264788	ENSGT00940000154521.A #33	ENSGT00940000157318 #34	ENSGT00390000005589.a.a #35	ENSGT01030000234563.b.a.a #37	ENSGT00950000183067.a.a	ENSGT00950000182850.a.b.a.a	ENSGT00940000168370	ENSGT00390000012556
Asian bonytongue	MODERN SPECIES	2	ENSSFOG00015030232	OTOP1 (ENSSFOG00015024418) #7	TMEM128 (ENSSFOG00015005582) #8	lyar (ENSSFOG00015028497) #9	zbtb49 (ENSSFOG00015027609) #10	NSG1 (ENSSFOG00015005540) #11	stx18 (ENSSFOG00015005528) #12	MSX1 (ENSSFOG00015028969) #14	CYTL1 (ENSSFOG00015005509) #15	STK32B (ENSSFOG00015005434) #16	EVC2 (ENSSFOG00015005412) #17	EVC (ENSSFOG00015026912) #18	crmp1 (ENSSFOG00015005387) #19	ENSSFOG00015030066	JAKMIP1 (ENSSFOG00015005312) #21	WFS1 (ENSSFOG00015005288) #22	PPP2R2C (ENSSFOG00015005261) #23	MAN2B2 (ENSSFOG00015005202) #24	tkfc (ENSSFOG00015005030)	ENSSFOG00015004926	ENSSFOG00015004819	ADISSP (ENSSFOG00015031005)	vax2 (ENSSFOG00015033174)	ENSSFOG00015004740	tex261 (ENSSFOG00015026330)	ENSSFOG00015027712	rgp1 (ENSSFOG00015004661)	GBA2 (ENSSFOG00015004580)
P. kingsleyae	MODERN SPECIES	551													crmp1 (ENSPKIG00000016473) #19	JAKMIP1 (ENSPKIG00000016552) #21	ENSPKIG00000016637	WFS1 (ENSPKIG00000016658) #22	PPP2R2C (ENSPKIG00000016699) #23
Osteoglossiformes	ANCESTRAL SPECIES	464													ENSGT00940000162193	ENSGT00390000003601.b	ENSGT00950000183177.a.b.b	ENSGT00390000016928.c.d #22	ENSGT00940000155150.a	ENSGT00940000155279.C.a.b	ENSGT00390000014876
Asian bonytongue	MODERN SPECIES	7	patl1 (ENSSFOG00015009614)	ENSSFOG00015009654	ENSSFOG00015024892	ENSSFOG00015009667	ENSSFOG00015026904	ENSSFOG00015029325	ENSSFOG00015032046	ENSSFOG00015009779	RPS6KB2 (ENSSFOG00015009820)	ENSSFOG00015009866	ENSSFOG00015009970	ENSSFOG00015009984	dtx4a (ENSSFOG00015025212)	ENSSFOG00015010021	exoc1l (ENSSFOG00015008063)	WFS1 (ENSSFOG00015008008) #22	chic2 (ENSSFOG00015007962)	camk2d1 (ENSSFOG00015007879)	ANK2 (ENSSFOG00015028530)	hpf1 (ENSSFOG00015007682)	ENSSFOG00015007597	ENSSFOG00015028400	ENSSFOG00015028148	ENSSFOG00015025711	ENSSFOG00015007477	ENSSFOG00015027094	ptgr1.1 (ENSSFOG00015007431)	faah2b (ENSSFOG00015007377)	ENSSFOG00015024283	DOK1 (ENSSFOG00015031712)	vps37c (ENSSFOG00015027279)
P. kingsleyae	MODERN SPECIES	579														chic2 (ENSPKIG00000016044)	slc34a2a (ENSPKIG00000016078)	WFS1 (ENSPKIG00000016110) #22	ENSPKIG00000016132	ENSPKIG00000016144	ENSPKIG00000016162	hpf1 (ENSPKIG00000016194)	ENSPKIG00000016274	ENSPKIG00000016310	ENSPKIG00000016337	ptgr1.1 (ENSPKIG00000016407)	faah2b (ENSPKIG00000016526)	ENSPKIG00000016561	CCT7 (ENSPKIG00000016595)	ENSPKIG00000016678	ENSPKIG00000016698
Osteoglossocephalai	ANCESTRAL SPECIES	181	ENSGT00940000157037.a	ENSGT00940000159350 #7	ENSGT00390000012901 #8	ENSGT00390000003477 #9	ENSGT00940000158750 #10	ENSGT00390000000483.b #11	ENSGT00390000014853 #12	ENSGT00940000161623 #14	ENSGT00390000016221 #15	ENSGT00940000160490 #16	ENSGT00940000154127.A #17	ENSGT00940000154127.B #18	ENSGT01030000234527.A.a.b.b.b #19	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000166785	ENSGT00390000016928.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.b ##23	ENSGT00940000159769.b	ENSGT00940000155279.C.a.b	ENSGT00390000014876
Clupeocephala	ANCESTRAL SPECIES	581														ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23
Euteleosteomorpha	ANCESTRAL SPECIES	54	ENSGT00940000164468.a.a.b.b	ENSGT00940000164468.a.b.a.b	ENSGT00940000164468.a.a.b.a.b	ENSGT00940000164983.d.a.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT01030000235223	ENSGT01060000248588.a.c.a.a	ENSGT00940000154903	ENSGT01090000260190	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23
Acanthomorphata	ANCESTRAL SPECIES	1	ENSGT00940000165118.a.a.a.a.b.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.a	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164468.a.b.a.b	ENSGT00940000164983.d.a.a.a.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000175691
Euacanthomorphacea	ANCESTRAL SPECIES	10	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.a	ENSGT00940000164468.a.a.b.a.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164468.a.b.a.b	ENSGT00940000164983.d.a.a.a.a.b.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Percomorphaceae	ANCESTRAL SPECIES	11	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.b	ENSGT00940000164468.a.b.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Percomorphaceae_B	ANCESTRAL SPECIES	14	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000164468.a.a.b.a.a.a.a.a.d	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b
Ovalentaria	ANCESTRAL SPECIES	15	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b
Atherinomorphae	ANCESTRAL SPECIES	9	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Cyprinodontiformes	ANCESTRAL SPECIES	8	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a
Aplocheiloidei	ANCESTRAL SPECIES	13		ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.a	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000163832.h
Mangrove rivulus	MODERN SPECIES	109			ENSKMAG00000013131	ENSKMAG00000013116	ENSKMAG00000013101	ENSKMAG00000013091	pcdh1g32 (ENSKMAG00000013063)	DIAPH1 (ENSKMAG00000012987)	TRPC7 (ENSKMAG00000012948)	ENSKMAG00000012926	DOCK2 (ENSKMAG00000012709)	hrh2a (ENSKMAG00000012630)	TLX3 (ENSKMAG00000012607)	KCNIP1 (ENSKMAG00000012569)	JAKMIP1 (ENSKMAG00000012527) #21	WFS1 (ENSKMAG00000012468) #22	PPP2R2C (ENSKMAG00000012407) ##23	ENSKMAG00000012373	mif (ENSKMAG00000012358)	ENSKMAG00000012347	ENSKMAG00000012344	ENSKMAG00000012332	ENSKMAG00000012307	ENSKMAG00000012276	cryba1l2 (ENSKMAG00000012262)	CTNND1 (ENSKMAG00000012144)	ENSKMAG00000012097	smtnl1 (ENSKMAG00000012088)	slc43a3b (ENSKMAG00000012057)	rtn4rl2b (ENSKMAG00000012040)	ENSKMAG00000012019
Turquoise killifish	MODERN SPECIES	1610	ENSNFUG00015000781	ENSNFUG00015000784	DIAPH1 (ENSNFUG00015000840)	ENSNFUG00015001159	ENSNFUG00015001161	TRPC7 (ENSNFUG00015001190)	ENSNFUG00015001259	ENSNFUG00015001260	DOCK2 (ENSNFUG00015001599)	ENSNFUG00015002755	hrh2a (ENSNFUG00015002757)	CABZ01067175.1 (ENSNFUG00015002761)	ENSNFUG00015002768	ENSNFUG00015002778	JAKMIP1 (ENSNFUG00015002798) #21	WFS1 (ENSNFUG00015002835) #22	PPP2R2C (ENSNFUG00015002860) ##23	ENSNFUG00015002884	ENSNFUG00015002890	ANKRD13D (ENSNFUG00015002957)	KDM2A (ENSNFUG00015003160)	stx3b (ENSNFUG00015003345)	RAN (ENSNFUG00015003377)	NDUFS8 (ENSNFUG00015003410)	ENSNFUG00015003417	rad9a (ENSNFUG00015003430)	p2rx3a (ENSNFUG00015003460)	SSRP1 (ENSNFUG00015003514)	ENSNFUG00015003625	SLC43A1A (ENSNFUG00015003628)	MED19A (ENSNFUG00015003631)
Cyprinodontoidei	ANCESTRAL SPECIES	19	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.a	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b.c	ENSGT00940000157622.b.d
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b.c	ENSGT00940000157622.b.d
Poecilia	ANCESTRAL SPECIES	34	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.a	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b.c	ENSGT00940000157622.b.d
NAME_6	ANCESTRAL SPECIES	28	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b.c	ENSGT00940000157622.b.d
Sailfin molly	MODERN SPECIES	95									DOK4 (ENSPLAG00000010224)	DOCK2 (ENSPLAG00000010184)	ENSPLAG00000009984	hrh2a (ENSPLAG00000009970)	ENSPLAG00000009943	KCNIP1 (ENSPLAG00000009928)	JAKMIP1 (ENSPLAG00000009898) #21	WFS1 (ENSPLAG00000009826) #22	PPP2R2C (ENSPLAG00000009817) ##23	ENSPLAG00000009793	mif (ENSPLAG00000009787)	ENSPLAG00000009772	ENSPLAG00000009766	ENSPLAG00000009748	ENSPLAG00000000696	ENSPLAG00000009735	ENSPLAG00000009714	cryba1l2 (ENSPLAG00000009697)	CTNND1 (ENSPLAG00000009673)	ENSPLAG00000009659	smtnl1 (ENSPLAG00000009653)	slc43a3b (ENSPLAG00000009623)	slc43a3b (ENSPLAG00000009611)
Amazon molly	MODERN SPECIES	433	ENSPFOG00000023864	ENSPFOG00000024545	ENSPFOG00000022626	ENSPFOG00000023835	ENSPFOG00000022797	pcdh1g31 (ENSPFOG00000023248)	pcdh1g32 (ENSPFOG00000022425)	DIAPH1 (ENSPFOG00000003167)	TRPC7 (ENSPFOG00000003971)	DOCK2 (ENSPFOG00000004523)	hrh2a (ENSPFOG00000006460)	TLX3 (ENSPFOG00000006469)	KCNIP1 (ENSPFOG00000006501)	ENSPFOG00000021766	JAKMIP1 (ENSPFOG00000006671) #21	WFS1 (ENSPFOG00000006924) #22	PPP2R2C (ENSPFOG00000007017) ##23	ENSPFOG00000022045	mif (ENSPFOG00000007163)	ENSPFOG00000024636	ENSPFOG00000007195	ENSPFOG00000007200	ENSPFOG00000007205	ENSPFOG00000007245	ENSPFOG00000007326	ENSPFOG00000007402	ENSPFOG00000022820	ENSPFOG00000023270	CTNND1 (ENSPFOG00000007490)	ENSPFOG00000021998	smtnl1 (ENSPFOG00000007703)
Guppy	MODERN SPECIES	440	ENSPREG00000018995	ENSPREG00000018983	pcdh1g32 (ENSPREG00000018962)	DIAPH1 (ENSPREG00000018901)	ENSPREG00000018887	TRPC7 (ENSPREG00000018843)	ENSPREG00000018821	ENSPREG00000018810	ENSPREG00000018804	ENSPREG00000018783	ENSPREG00000018771	hrh2a (ENSPREG00000018736)	TLX3 (ENSPREG00000018716)	KCNIP1 (ENSPREG00000018674)	JAKMIP1 (ENSPREG00000018604) #21	WFS1 (ENSPREG00000018552) #22	PPP2R2C (ENSPREG00000018523) ##23	ENSPREG00000018517 ##23	ENSPREG00000018507	mif (ENSPREG00000018392)	ENSPREG00000018344	ENSPREG00000018318	ENSPREG00000018310	ENSPREG00000018285	ENSPREG00000018038	cryba1l2 (ENSPREG00000017982)	CTNND1 (ENSPREG00000017917)	ENSPREG00000017892	smtnl1 (ENSPREG00000017880)	SLC43A3 (ENSPREG00000017859)	ENSPREG00000017834
Platyfish	MODERN SPECIES	15	ENSXMAG00000021932	ENSXMAG00000026307	ENSXMAG00000027350	ENSXMAG00000020855	pcdh1g32 (ENSXMAG00000028250)	DIAPH1 (ENSXMAG00000011239)	ENSXMAG00000027971	TRPC7 (ENSXMAG00000026479)	ENSXMAG00000022529	DOCK2 (ENSXMAG00000011315)	hrh2a (ENSXMAG00000011420)	TLX3 (ENSXMAG00000011421)	ENSXMAG00000029829	KCNIP1 (ENSXMAG00000021925)	JAKMIP1 (ENSXMAG00000011447) #21	WFS1 (ENSXMAG00000004439) #22	PPP2R2C (ENSXMAG00000023056) ##23	ENSXMAG00000021711	mif (ENSXMAG00000024562)	ENSXMAG00000029826	ENSXMAG00000009699	ENSXMAG00000024699	ENSXMAG00000029610	ENSXMAG00000009717	ENSXMAG00000023058	ENSXMAG00000026412	CTNND1 (ENSXMAG00000009745)	ENSXMAG00000025208	smtnl1 (ENSXMAG00000009771)	ENSXMAG00000022130	slc43a3b (ENSXMAG00000024156)
NAME_4	ANCESTRAL SPECIES	34	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.h	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b.c	ENSGT00940000157622.b.d	ENSGT00940000158505.n.a
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	1151																WFS1 (ENSCVAG00000020895) #22	PPP2R2C (ENSCVAG00000020950) ##23	ENSCVAG00000020963	mif (ENSCVAG00000020977)	ENSCVAG00000020983	ENSCVAG00000020989	ENSCVAG00000020998	ENSCVAG00000021004	ENSCVAG00000021033	ENSCVAG00000021052	cryba1l2 (ENSCVAG00000021092)	CTNND1 (ENSCVAG00000021128)	ENSCVAG00000021152	smtnl1 (ENSCVAG00000021166)	slc43a3b (ENSCVAG00000021178)	slc43a3b (ENSCVAG00000021318)
Sheepshead minnow	MODERN SPECIES	753								TRPC7 (ENSCVAG00000009006)	DOCK2 (ENSCVAG00000008974)	ENSCVAG00000008864	hrh2a (ENSCVAG00000008848)	TLX3 (ENSCVAG00000008832)	ENSCVAG00000000246	ENSCVAG00000008803	JAKMIP1 (ENSCVAG00000008784) #21	WFS1 (ENSCVAG00000008681) #22
Mummichog	MODERN SPECIES	2294	ENSFHEG00000013833	ENSFHEG00000013874	ENSFHEG00000013888	ENSFHEG00000013903	pcdh1g32 (ENSFHEG00000013930)	ENSFHEG00000013981	ENSFHEG00000013985	ENSFHEG00000013997	TRPC7 (ENSFHEG00000014028)	ENSFHEG00000014041	DOCK2 (ENSFHEG00000014145)	hrh2a (ENSFHEG00000014161)	TLX3 (ENSFHEG00000014269)	ENSFHEG00000014288	JAKMIP1 (ENSFHEG00000014372) #21	WFS1 (ENSFHEG00000014385) #22	PPP2R2C (ENSFHEG00000014404) ##23	ENSFHEG00000014407 ##23	ENSFHEG00000014411	mif (ENSFHEG00000014428)	ENSFHEG00000014435	ENSFHEG00000014447	ENSFHEG00000014456	ENSFHEG00000000350	ENSFHEG00000014486	ENSFHEG00000014508	cryba1l2 (ENSFHEG00000014548)	CTNND1 (ENSFHEG00000014597)	ENSFHEG00000014608	smtnl1 (ENSFHEG00000014621)	SLC43A3 (ENSFHEG00000014684)
Oryzias	ANCESTRAL SPECIES	17	ENSGT00940000164983.d.a.a.a.b.j	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b.i.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00940000154903	ENSGT00960000186671	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000163832.h	ENSGT00940000153668.B
Oryzias_b	ANCESTRAL SPECIES	33	ENSGT00940000166432.d.h.a.b.i	ENSGT00940000164468.a.a.b.a.b.c.a	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.a.c	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b.i.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00940000154903	ENSGT00960000186671	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000163832.h	ENSGT00940000153668.B
Indian medaka	MODERN SPECIES	16	ENSOMEG00000022374	ENSOMEG00000022357	ENSOMEG00000022309	ENSOMEG00000022296	ENSOMEG00000022264	ENSOMEG00000022214	DIAPH1 (ENSOMEG00000022191)	ENSOMEG00000022160	TRPC7 (ENSOMEG00000022142)	DOCK2 (ENSOMEG00000022089)	ENSOMEG00000021959	hrh2a (ENSOMEG00000021942)	TLX3 (ENSOMEG00000021930)	ENSOMEG00000021896	JAKMIP1 (ENSOMEG00000021835) #21	WFS1 (ENSOMEG00000021764) #22	PPP2R2C (ENSOMEG00000021708) ##23	ENSOMEG00000000973	mif (ENSOMEG00000021665)	ENSOMEG00000021656	ENSOMEG00000021644	ENSOMEG00000021621	ENSOMEG00000021605	cryba1l2 (ENSOMEG00000021598)	CTNND1 (ENSOMEG00000021568)	ENSOMEG00000021481	smtnl1 (ENSOMEG00000021465)	slc43a3b (ENSOMEG00000021383)	rtn4rl2b (ENSOMEG00000000568)	ENSOMEG00000000823	clp1 (ENSOMEG00000021303)
Javanese ricefish	MODERN SPECIES	1	ENSOJAG00000008573	ENSOJAG00000008699	ENSOJAG00000008782	ENSOJAG00000008874	DIAPH1 (ENSOJAG00000009066)	ENSOJAG00000010258	TRPC7 (ENSOJAG00000010305)	DOCK2 (ENSOJAG00000010523)	ENSOJAG00000011403	ENSOJAG00000011417	hrh2a (ENSOJAG00000011427)	ENSOJAG00000011435	TLX3 (ENSOJAG00000011450)	ENSOJAG00000011462	JAKMIP1 (ENSOJAG00000011553) #21	WFS1 (ENSOJAG00000012344) #22	PPP2R2C (ENSOJAG00000012364) ##23	ENSOJAG00000012368 ##23	ENSOJAG00000012385	mif (ENSOJAG00000012387)	ENSOJAG00000012398	ENSOJAG00000012416	ENSOJAG00000012450	ENSOJAG00000012468	cryba1l2 (ENSOJAG00000012490)	CTNND1 (ENSOJAG00000012605)	ENSOJAG00000013448	smtnl1 (ENSOJAG00000013454)	slc43a3b (ENSOJAG00000013463)	rtn4rl2b (ENSOJAG00000013488)	ENSOJAG00000013495
Oryzias_a	ANCESTRAL SPECIES	19	ENSGT00940000164468.a.a.b.a.a.a.a.b.a.c	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b.i.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00940000154903	ENSGT00960000186671	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000175691	ENSGT00940000153668.B
Japanese Medaka HdrR	MODERN SPECIES	1	ENSORLG00000023281	ENSORLG00000023428	ENSORLG00000026939	ENSORLG00000025685	ENSORLG00000029815	DIAPH1 (ENSORLG00000004133)	ENSORLG00000029796	TRPC7 (ENSORLG00000004083)	ENSORLG00000028883	ENSORLG00000024984	DOCK2 (ENSORLG00000004054)	hrh2a (ENSORLG00000003959)	ENSORLG00000003952	ENSORLG00000023171	JAKMIP1 (ENSORLG00000003914) #21	WFS1 (ENSORLG00000003898) #22	PPP2R2C (ENSORLG00000003880) ##23	ENSORLG00000028566	mif (ENSORLG00000003850)	ENSORLG00000028209	ENSORLG00000026355	ENSORLG00000023914	ENSORLG00000003845	ENSORLG00000029627	ENSORLG00000003821	cryba1l2 (ENSORLG00000003749)	ENSORLG00000003733	ENSORLG00000025348	smtnl1 (ENSORLG00000003702)	slc43a3b (ENSORLG00000003671)	rtn4rl2b (ENSORLG00000003650)
Chinese medaka	MODERN SPECIES	771					ENSOSIG00000003995	pcdh1g32 (ENSOSIG00000004002)	DIAPH1 (ENSOSIG00000004193)	ENSOSIG00000009565	TRPC7 (ENSOSIG00000009571)	DOCK2 (ENSOSIG00000010159)	ENSOSIG00000010161	hrh2a (ENSOSIG00000010162)	TLX3 (ENSOSIG00000010163)	ENSOSIG00000010165	JAKMIP1 (ENSOSIG00000010184) #21	WFS1 (ENSOSIG00000010963) #22	PPP2R2C (ENSOSIG00000010966) ##23	ENSOSIG00000012686	ENSOSIG00000012689	mif (ENSOSIG00000012690)	ENSOSIG00000012691	ENSOSIG00000012692	ENSOSIG00000012693	ENSOSIG00000012695	ENSOSIG00000012700	cryba1l2 (ENSOSIG00000012702)	ENSOSIG00000012722	smtnl1 (ENSOSIG00000014799)	slc43a3b (ENSOSIG00000014802)	rtn4rl2b (ENSOSIG00000014805)	ENSOSIG00000014807
Ovalentaria_B	ANCESTRAL SPECIES	13	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.a	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.a	ENSGT00940000164468.a.a.b.a.a.a.a.a.d	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Pomacentridae	ANCESTRAL SPECIES	4	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.b	ENSGT01030000237704	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000153576.d	ENSGT00940000158505.n.a
Pomacentridae_A	ANCESTRAL SPECIES	172	ENSGT00940000164468.a.a.b.a.a.a.a.a.c.a.a.b.a.b	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608.fb	ENSGT00940000164868.B
Amphiprion	ANCESTRAL SPECIES	17	ENSGT00940000164468.a.a.b.a.a.a.a.a.c.a.a.b.a.b	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000164868.B	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000163832.g.a	ENSGT00940000153668.B
Clown anemonefish	MODERN SPECIES	2396														ENSAOCG00000009283	JAKMIP1 (ENSAOCG00000009252) #21	WFS1 (ENSAOCG00000009166) #22	PPP2R2C (ENSAOCG00000009146) ##23	ENSAOCG00000009098	ENSAOCG00000009077	mif (ENSAOCG00000009067)
Orange clownfish	MODERN SPECIES	4	ENSAPEG00000013060	ENSAPEG00000013026	DIAPH1 (ENSAPEG00000012961)	ENSAPEG00000012943	TRPC7 (ENSAPEG00000012920)	ENSAPEG00000012874	ENSAPEG00000012856	ENSAPEG00000012848	ENSAPEG00000012803	ENSAPEG00000012781	hrh2a (ENSAPEG00000012722)	TLX3 (ENSAPEG00000012702)	ENSAPEG00000012680	ENSAPEG00000012608 #21	JAKMIP1 (ENSAPEG00000012590) #21	WFS1 (ENSAPEG00000012546) #22	PPP2R2C (ENSAPEG00000012503) ##23	ENSAPEG00000012478	ENSAPEG00000012466	mif (ENSAPEG00000012461)	ENSAPEG00000012449	ENSAPEG00000012445	ENSAPEG00000012425	ENSAPEG00000012410	ENSAPEG00000012398	ENSAPEG00000012386	ENSAPEG00000012374	ENSAPEG00000012342	CTNND1 (ENSAPEG00000012309)	ENSAPEG00000012300	smtnl1 (ENSAPEG00000012293)
Spiny chromis	MODERN SPECIES	557									TRPC7 (ENSAPOG00000020048)	ENSAPOG00000020070	hrh2a (ENSAPOG00000020078)	DOCK2 (ENSAPOG00000020102)	TLX3 (ENSAPOG00000020114)	KCNIP1 (ENSAPOG00000020169)	JAKMIP1 (ENSAPOG00000020265) #21	WFS1 (ENSAPOG00000020282) #22	PPP2R2C (ENSAPOG00000020333) ##23	ENSAPOG00000020358
Bicolor damselfish	MODERN SPECIES	356	cnrip1a (ENSSPAG00000018861)	ENSSPAG00000018852	ENSSPAG00000018835	ENSSPAG00000018792	ENSSPAG00000018772	TRPC7 (ENSSPAG00000018745)	ENSSPAG00000018719	ENSSPAG00000018705	ENSSPAG00000018695	ENSSPAG00000018649	ENSSPAG00000018616	hrh2a (ENSSPAG00000018569)	TLX3 (ENSSPAG00000018555)	KCNIP1 (ENSSPAG00000018536)	JAKMIP1 (ENSSPAG00000018442) #21	WFS1 (ENSSPAG00000018393) #22	PPP2R2C (ENSSPAG00000018369) ##23	ENSSPAG00000018349	ENSSPAG00000018340	mif (ENSSPAG00000018332)	ENSSPAG00000018325	ENSSPAG00000018318	ENSSPAG00000018288	ENSSPAG00000018257	ENSSPAG00000018143	ENSSPAG00000018120	CTNND1 (ENSSPAG00000018037)	ENSSPAG00000018010	smtnl1 (ENSSPAG00000018000)
Cichlidae	ANCESTRAL SPECIES	8	ENSGT00940000164983.d.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	17	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000178786	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	24	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.a.a.b.a	ENSGT00940000164468.a.a.b.a.a.a.a.a.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a
Haplochromini	ANCESTRAL SPECIES	14	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.a.a.b.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a.c.a	ENSGT01060000248588.a.c.a.a.d	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000171111.f	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Haplochromini_A	ANCESTRAL SPECIES	13	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.a.a.b.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.b.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a.d	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000171111.f	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Haplochromini_B	ANCESTRAL SPECIES	7	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT01100000267059	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a.d	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000171111.f	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000153576.d
Eastern happy	MODERN SPECIES	11	ENSACLG00000012606	ENSACLG00000012619	ENSACLG00000012631	ENSACLG00000012640	ENSACLG00000012654	DIAPH1 (ENSACLG00000012677)	ENSACLG00000012776	TRPC7 (ENSACLG00000012780)	ENSACLG00000013129	ENSACLG00000013140	ENSACLG00000013209	hrh2a (ENSACLG00000013230)	TLX3 (ENSACLG00000013249)	ENSACLG00000013252	JAKMIP1 (ENSACLG00000013265) #21	WFS1 (ENSACLG00000013295) #22	PPP2R2C (ENSACLG00000013314) ##23	ENSACLG00000013333	ENSACLG00000013340	mif (ENSACLG00000013343)	ENSACLG00000013347	ENSACLG00000013353	ENSACLG00000013357	ENSACLG00000013360	ENSACLG00000013367	ENSACLG00000013371	ENSACLG00000013381	CTNND1 (ENSACLG00000013393)	ENSACLG00000013475	smtnl1 (ENSACLG00000013480)	ENSACLG00000013487
Zebra mbuna	MODERN SPECIES	1102	ENSMZEG00005002018	ENSMZEG00005002064	ENSMZEG00005002080	ENSMZEG00005002088	ENSMZEG00005002095	ENSMZEG00005002107	DIAPH1 (ENSMZEG00005002120)	ENSMZEG00005002204	TRPC7 (ENSMZEG00005002208)	DOCK2 (ENSMZEG00005002233)	ENSMZEG00005002326	hrh2a (ENSMZEG00005002342)	TLX3 (ENSMZEG00005002364)	KCNIP1 (ENSMZEG00005002386)	JAKMIP1 (ENSMZEG00005002414) #21	WFS1 (ENSMZEG00005002442) #22	PPP2R2C (ENSMZEG00005002484) ##23	ENSMZEG00005002522	mif (ENSMZEG00005002529)	ENSMZEG00005002541	ENSMZEG00005002566	ENSMZEG00005002572	ENSMZEG00005002576	ENSMZEG00005002588	ENSMZEG00005002603	ENSMZEG00005002621	CTNND1 (ENSMZEG00005002640)	ENSMZEG00005002733	smtnl1 (ENSMZEG00005002741)	ENSMZEG00005002752	rtn4rl2b (ENSMZEG00005002765)
P. nyererei	MODERN SPECIES	303	ENSPNYG00000018226	ENSPNYG00000018155	ENSPNYG00000018128	ENSPNYG00000018116	ENSPNYG00000018098	pcdh1g32 (ENSPNYG00000018083)	ENSPNYG00000018064	ENSPNYG00000018056	TRPC7 (ENSPNYG00000018026)	ENSPNYG00000018009	DOCK2 (ENSPNYG00000017871)	hrh2a (ENSPNYG00000017829)	TLX3 (ENSPNYG00000017813)	KCNIP1 (ENSPNYG00000017788)	JAKMIP1 (ENSPNYG00000017731) #21	WFS1 (ENSPNYG00000017694) #22	PPP2R2C (ENSPNYG00000017675) ##23	mif (ENSPNYG00000017659)	ENSPNYG00000017645	ENSPNYG00000017632	ENSPNYG00000017609	ENSPNYG00000017566	ENSPNYG00000017546	ENSPNYG00000017527	CTNND1 (ENSPNYG00000017447)	ENSPNYG00000017399	smtnl1 (ENSPNYG00000017383)	slc43a3b (ENSPNYG00000017343)	rtn4rl2b (ENSPNYG00000017324)	ENSPNYG00000017305	ENSPNYG00000017293
Burton s mouthbrooder	MODERN SPECIES	273									TRPC7 (ENSHBUG00000009371)	ENSHBUG00000009390	DOCK2 (ENSHBUG00000009736)	hrh2a (ENSHBUG00000009779)	TLX3 (ENSHBUG00000009797)	KCNIP1 (ENSHBUG00000009833)	JAKMIP1 (ENSHBUG00000009926) #21	WFS1 (ENSHBUG00000010011) #22	PPP2R2C (ENSHBUG00000010056) ##23	ENSHBUG00000010099	mif (ENSHBUG00000010173)	ENSHBUG00000010188	ENSHBUG00000010195	ENSHBUG00000010206	ENSHBUG00000010229	ENSHBUG00000000265	ENSHBUG00000010275	ENSHBUG00000010282	ENSHBUG00000010308	ENSHBUG00000001114	smtnl1 (ENSHBUG00000010327)	ENSHBUG00000010353	rtn4rl2b (ENSHBUG00000010379)
Lyretail cichlid	MODERN SPECIES	292	ENSNBRG00000006053	ENSNBRG00000006041	ENSNBRG00000006024	ENSNBRG00000006010	pcdh1g32 (ENSNBRG00000005995)	ENSNBRG00000005985	ENSNBRG00000005972	ENSNBRG00000005968	TRPC7 (ENSNBRG00000005928)	ENSNBRG00000005915	DOCK2 (ENSNBRG00000005795)	hrh2a (ENSNBRG00000005767)	TLX3 (ENSNBRG00000005752)	KCNIP1 (ENSNBRG00000005725)	JAKMIP1 (ENSNBRG00000005654) #21	WFS1 (ENSNBRG00000005634) #22	PPP2R2C (ENSNBRG00000005601) ##23	ENSNBRG00000005587 ##23	ENSNBRG00000005580	ENSNBRG00000005571	mif (ENSNBRG00000005547)	ENSNBRG00000005526	ENSNBRG00000005514	ENSNBRG00000005500	ENSNBRG00000005488	ENSNBRG00000005479	ENSNBRG00000005458	ENSNBRG00000005443	ENSNBRG00000005421	ENSNBRG00000005404	ENSNBRG00000005386
Nile tilapia	MODERN SPECIES	11	ENSONIG00000028049	ENSONIG00000028315	ENSONIG00000037899	ENSONIG00000004971	pcdh1g32 (ENSONIG00000035198)	DIAPH1 (ENSONIG00000004973)	ENSONIG00000038831	TRPC7 (ENSONIG00000004992)	ENSONIG00000031886	DOCK2 (ENSONIG00000004998)	hrh2a (ENSONIG00000005017)	TLX3 (ENSONIG00000028183)	KCNIP1 (ENSONIG00000036445)	JAKMIP1 (ENSONIG00000005040) #21	ENSONIG00000021369	WFS1 (ENSONIG00000005041) #22	PPP2R2C (ENSONIG00000005046) ##23	ENSONIG00000027480	mif (ENSONIG00000037944)	ENSONIG00000038445	ENSONIG00000028849	ENSONIG00000005052	ENSONIG00000042304	ENSONIG00000005059	ENSONIG00000005061	ENSONIG00000005067	CTNND1 (ENSONIG00000005070)	smtnl1 (ENSONIG00000005077)	ENSONIG00000005079	rtn4rl2b (ENSONIG00000041461)	ENSONIG00000031895
Midas cichlid	MODERN SPECIES	130	ENSACIG00000005366	ENSACIG00000005373	ENSACIG00000005380	ENSACIG00000005394	ENSACIG00000005400	pcdh1g32 (ENSACIG00000005412)	DIAPH1 (ENSACIG00000005486)	TRPC7 (ENSACIG00000005617)	ENSACIG00000005646	DOCK2 (ENSACIG00000005659)	ENSACIG00000005758	hrh2a (ENSACIG00000005769)	TLX3 (ENSACIG00000005813)	ENSACIG00000005838	JAKMIP1 (ENSACIG00000005923) #21	WFS1 (ENSACIG00000005968) #22	PPP2R2C (ENSACIG00000005990) ##23	ENSACIG00000006016	mif (ENSACIG00000006037)	ENSACIG00000006047	ENSACIG00000006055	ENSACIG00000006063	ENSACIG00000006111	ENSACIG00000006160	ENSACIG00000006178	CTNND1 (ENSACIG00000006200)	ENSACIG00000006228	ENSACIG00000006240	ENSACIG00000006259	rtn4rl2b (ENSACIG00000006287)	ENSACIG00000006297
Percomorphaceae_C	ANCESTRAL SPECIES	16	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000162287.C	ENSGT00940000181435	ENSGT00940000168692	ENSGT01020000230438.A.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c
Percomorphaceae_D	ANCESTRAL SPECIES	17	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164468.a.a.b.a.a.a.a.a.d	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a
Anabantaria	ANCESTRAL SPECIES	15	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000163832.h	ENSGT00940000163832.g.a
Zig-zag eel	MODERN SPECIES	1	ENSMAMG00000025204	ENSMAMG00000028499	ENSMAMG00000026733	ENSMAMG00000027118	ENSMAMG00000027415	pcdh1g32 (ENSMAMG00000003499)	ENSMAMG00000003472	ENSMAMG00000003465	ENSMAMG00000003440	ENSMAMG00000003417	ENSMAMG00000003376	ENSMAMG00000003339	ENSMAMG00000003313	ENSMAMG00000003241	JAKMIP1 (ENSMAMG00000003179) #21	ENSMAMG00000027245 #22	PPP2R2C (ENSMAMG00000003118) ##23	ENSMAMG00000024927	ENSMAMG00000025624	ENSMAMG00000003092	ENSMAMG00000003087	ENSMAMG00000026121	ENSMAMG00000003037	ENSMAMG00000002425	cryba1l1 (ENSMAMG00000003017)	ENSMAMG00000002289	ENSMAMG00000024738	smtnl1 (ENSMAMG00000002257)	ENSMAMG00000002247	rtn4rl2b (ENSMAMG00000002221)	ENSMAMG00000002178
Anabantoidei	ANCESTRAL SPECIES	11	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.a	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.a	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000159910	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT01100000263505.b.b.a.a.a.b.e.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000163832.h	ENSGT00940000153668.B
Climbing perch	MODERN SPECIES	1	ENSATEG00000027619	ENSATEG00000029404	ENSATEG00000025898	ENSATEG00000010975	ENSATEG00000011032	ENSATEG00000028093	ENSATEG00000011085	ENSATEG00000011106	ENSATEG00000011146	ENSATEG00000011517	ENSATEG00000011553	ENSATEG00000011569	ENSATEG00000011575	ENSATEG00000011605	JAKMIP1 (ENSATEG00000011784) #21	ENSATEG00000011830 #22	PPP2R2C (ENSATEG00000011873) ##23	ENSATEG00000025185	ENSATEG00000028267	ENSATEG00000011925	ENSATEG00000027581	ENSATEG00000011941	ENSATEG00000011950	ENSATEG00000011984	ENSATEG00000022828	ENSATEG00000012195	ENSATEG00000012214	smtnl1 (ENSATEG00000012289)	ENSATEG00000012301	rtn4rl2b (ENSATEG00000027803)	ENSATEG00000012363
Siamese fighting fish	MODERN SPECIES	1	ENSBSLG00000009360	ENSBSLG00000009364	ENSBSLG00000009379	ENSBSLG00000009425	ENSBSLG00000009435	ENSBSLG00000009494	ENSBSLG00000009498	DIAPH1 (ENSBSLG00000009564)	TRPC7 (ENSBSLG00000011220)	DOCK2 (ENSBSLG00000013375)	ENSBSLG00000013980	ENSBSLG00000013989	TLX3 (ENSBSLG00000014003)	KCNIP1 (ENSBSLG00000014013)	JAKMIP1 (ENSBSLG00000014196) #21	WFS1 (ENSBSLG00000014655) #22	PPP2R2C (ENSBSLG00000014749) ##23	ENSBSLG00000016718	mif (ENSBSLG00000016988)	ENSBSLG00000017000	ENSBSLG00000017017	ENSBSLG00000017032	ENSBSLG00000017060	ENSBSLG00000017088	ENSBSLG00000017151	ENSBSLG00000017187	CTNND1 (ENSBSLG00000017260)	smtnl1 (ENSBSLG00000017935)	zgc:153018 (ENSBSLG00000017940)	ENSBSLG00000017959	nudt22 (ENSBSLG00000017984)
Carangaria	ANCESTRAL SPECIES	15	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a
Carangaria_A	ANCESTRAL SPECIES	17	ENSGT00940000165759.a.a	ENSGT01060000248675	ENSGT00940000164983.d.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a
Seriola	ANCESTRAL SPECIES	32	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.b	ENSGT00940000164983.d.a.a.a.a.b.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.b	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000153576.d	ENSGT00940000158505.n.a
Greater amberjack	MODERN SPECIES	113	ENSSDUG00000013497	ENSSDUG00000013524	ENSSDUG00000013539	pcdh1g32 (ENSSDUG00000013559)	DIAPH1 (ENSSDUG00000013578)	ENSSDUG00000013657	TRPC7 (ENSSDUG00000013669)	ENSSDUG00000013709	ENSSDUG00000013723	DOCK2 (ENSSDUG00000013748)	ENSSDUG00000013855	hrh2a (ENSSDUG00000013861)	TLX3 (ENSSDUG00000013872)	KCNIP1 (ENSSDUG00000013891)	JAKMIP1 (ENSSDUG00000013978) #21	WFS1 (ENSSDUG00000014035) #22	PPP2R2C (ENSSDUG00000014047) ##23	ENSSDUG00000014104	mif (ENSSDUG00000014116)	ENSSDUG00000014131	ENSSDUG00000014146	ENSSDUG00000014187	ENSSDUG00000014193	ENSSDUG00000014203	ENSSDUG00000014211	ENSSDUG00000014228	CTNND1 (ENSSDUG00000014257)	ENSSDUG00000014396	ENSSDUG00000014401	ENSSDUG00000014416	rtn4rl2b (ENSSDUG00000014449)
Yellowtail amberjack	MODERN SPECIES	2961	ENSSLDG00000024752	ENSSLDG00000024754	DIAPH1 (ENSSLDG00000024765)	ENSSLDG00000024837	ENSSLDG00000024841	TRPC7 (ENSSLDG00000024866)	ENSSLDG00000025096	ENSSLDG00000000121	ENSSLDG00000000155	ENSSLDG00000000180	ENSSLDG00000000270	hrh2a (ENSSLDG00000000329)	TLX3 (ENSSLDG00000000339)	KCNIP1 (ENSSLDG00000000373)	JAKMIP1 (ENSSLDG00000000395) #21	WFS1 (ENSSLDG00000000475) #22	PPP2R2C (ENSSLDG00000000484) ##23	ENSSLDG00000000528	ENSSLDG00000000539	mif (ENSSLDG00000000566)	ENSSLDG00000000591	ENSSLDG00000000636	ENSSLDG00000000642	ENSSLDG00000000650	ENSSLDG00000000665	ENSSLDG00000000700	ENSSLDG00000000705	CTNND1 (ENSSLDG00000000739)	ENSSLDG00000000806	ENSSLDG00000000817	rtn4rl2b (ENSSLDG00000000881)
Barramundi perch	MODERN SPECIES	93	ENSLCAG00010016649	ENSLCAG00010016660	ENSLCAG00010016678	ENSLCAG00010016679	ENSLCAG00010016687	ENSLCAG00010016694	DIAPH1 (ENSLCAG00010016789)	ENSLCAG00010017273	TRPC7 (ENSLCAG00010017275)	DOCK2 (ENSLCAG00010017399)	ENSLCAG00010018325	hrh2a (ENSLCAG00010018326)	TLX3 (ENSLCAG00010018328)	KCNIP1 (ENSLCAG00010018332)	JAKMIP1 (ENSLCAG00010018343) #21	WFS1 (ENSLCAG00010018351) #22	PPP2R2C (ENSLCAG00010018361) ##23	ENSLCAG00010018439	mif (ENSLCAG00010018445)	ENSLCAG00010018453	ENSLCAG00010018456	ENSLCAG00010018468	ENSLCAG00010018472	ENSLCAG00010018477	ENSLCAG00010018484	ENSLCAG00010018494	CTNND1 (ENSLCAG00010018510)	smtnl1 (ENSLCAG00010018536)	slc43a3b (ENSLCAG00010018538)	rtn4rl2b (ENSLCAG00010018545)	ENSLCAG00010018548
Pleuronectoidei	ANCESTRAL SPECIES	19	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000175691
Turbot	MODERN SPECIES	4	ENSSMAG00000027890	ENSSMAG00000018746	ENSSMAG00000031312	ENSSMAG00000018752	ENSSMAG00000028882	pcdh1g32 (ENSSMAG00000018631)	ENSSMAG00000018768	ENSSMAG00000028499	ENSSMAG00000018822	ENSSMAG00000018931	ENSSMAG00000018851	ENSSMAG00000021831	ENSSMAG00000018955	ENSSMAG00000025323	JAKMIP1 (ENSSMAG00000019033) #21	ENSSMAG00000019101 #22	PPP2R2C (ENSSMAG00000019139) ##23	ENSSMAG00000027579	ENSSMAG00000019177	ENSSMAG00000021465	ENSSMAG00000019202	ENSSMAG00000019205	ENSSMAG00000019210	ENSSMAG00000019227	cryba1l1 (ENSSMAG00000027635)	ENSSMAG00000019277	ENSSMAG00000026676	smtnl1 (ENSSMAG00000036341)	ENSSMAG00000019385	rtn4rl2b (ENSSMAG00000019405)	ENSSMAG00000019409
Tongue sole	MODERN SPECIES	6	rad9a (ENSCSEG00000007077)	ENSCSEG00000007066	ran (ENSCSEG00000007046)	stx3b (ENSCSEG00000007018)	KDM2A (ENSCSEG00000006996)	ANKRD13D (ENSCSEG00000006947)	DIAPH1 (ENSCSEG00000006886)	ENSCSEG00000006879	TRPC7 (ENSCSEG00000006859)	ENSCSEG00000006857	DOCK2 (ENSCSEG00000006812)	hrh2a (ENSCSEG00000006801)	TLX3 (ENSCSEG00000006797)	KCNIP1 (ENSCSEG00000006772)	JAKMIP1 (ENSCSEG00000006724) #21	WFS1 (ENSCSEG00000006702) #22	PPP2R2C (ENSCSEG00000006654) ##23	ENSCSEG00000006644	mif (ENSCSEG00000006641)	ENSCSEG00000006632	ENSCSEG00000006630	ENSCSEG00000006618	ENSCSEG00000006599	ENSCSEG00000006591	cryba1l2 (ENSCSEG00000006579)	CTNND1 (ENSCSEG00000006547)	ENSCSEG00000006539	smtnl1 (ENSCSEG00000006536)	slc43a3b (ENSCSEG00000006520)	rtn4rl2b (ENSCSEG00000006516)	ENSCSEG00000006511
Eupercaria	ANCESTRAL SPECIES	12	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.a	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000162287.C	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Tetraodontidae	ANCESTRAL SPECIES	9	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000165759.b.a.a	ENSGT00940000165759.b.a.b.a.a.b.o	ENSGT00940000166867	ENSGT00940000156683	ENSGT00940000159910	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000153576.d	ENSGT00940000158505.n.a	ENSGT00940000163832.h
Fugu	MODERN SPECIES	5	ENSTRUG00000033156	ENSTRUG00000028519	ENSTRUG00000020029	ENSTRUG00000003015	ENSTRUG00000000128	pcdh1g32 (ENSTRUG00000008276)	DIAPH1 (ENSTRUG00000008676)	ENSTRUG00000022602	TRPC7 (ENSTRUG00000009484)	ENSTRUG00000020240	DOCK2 (ENSTRUG00000009915)	hrh2a (ENSTRUG00000010410)	TLX3 (ENSTRUG00000010456)	KCNIP1 (ENSTRUG00000010568)	JAKMIP1 (ENSTRUG00000010661) #21	WFS1 (ENSTRUG00000021766) #22	PPP2R2C (ENSTRUG00000010879) ##23	ENSTRUG00000019740	ENSTRUG00000021908	mif (ENSTRUG00000027637)	mif (ENSTRUG00000028192)	ENSTRUG00000028159	ENSTRUG00000020290	ENSTRUG00000011184	ENSTRUG00000011470	ENSTRUG00000011557	cryba1l2 (ENSTRUG00000011799)	CTNND1 (ENSTRUG00000011972)	ENSTRUG00000022596	smtnl1 (ENSTRUG00000019989)	ENSTRUG00000012340
Eupecaria_A	ANCESTRAL SPECIES	13	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910.p	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.a	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.b	ENSGT00940000159910.o.a	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000162287.C	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b
Ballan wrasse	MODERN SPECIES	245							DIAPH1 (ENSLBEG00000011802)	ENSLBEG00000011779	TRPC7 (ENSLBEG00000011753)	ENSLBEG00000011729	DOCK2 (ENSLBEG00000011592)	hrh2a (ENSLBEG00000011545)	TLX3 (ENSLBEG00000011513)	KCNIP1 (ENSLBEG00000011455)	JAKMIP1 (ENSLBEG00000011332) #21	WFS1 (ENSLBEG00000011276) #22	PPP2R2C (ENSLBEG00000011237) ##23	ENSLBEG00000011198	mif (ENSLBEG00000011148)	ENSLBEG00000011126	ENSLBEG00000011114	ENSLBEG00000011093	ENSLBEG00000011077	ENSLBEG00000010836	ENSLBEG00000010738	CTNND1 (ENSLBEG00000010427)	ENSLBEG00000010333	smtnl1 (ENSLBEG00000010316)	SLC43A3 (ENSLBEG00000010286)	rtn4rl2b (ENSLBEG00000010268)	ENSLBEG00000010245
Eupecaria_B	ANCESTRAL SPECIES	13	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.a	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910.p	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT00940000164700.A	ENSGT00940000162287.C	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.b.b	ENSGT01030000234592.A.b.b.b.b.a.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b
Perciformes	ANCESTRAL SPECIES	13	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910.p	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01030000234576.D.a.a.b.a.a.a.b	ENSGT00990000203884	ENSGT01050000244883.A.a.a.b.v	ENSGT01100000263505.b.b.a.a.a.b.f	ENSGT00940000164700.A	ENSGT00940000162287.C	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.b.b	ENSGT01030000234592.A.b.b.b.b.a.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a
Perciformes_a	ANCESTRAL SPECIES	11	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.b.b	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910.p	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162367.f	ENSGT01050000244883.A.a.a.b.v	ENSGT01100000263505.b.b.a.a.a.b.f	ENSGT00940000164700.A	ENSGT00940000162287.C	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.b.b	ENSGT01030000234592.A.b.b.b.b.a.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a
Channel bull blenny	MODERN SPECIES	1	ENSCGOG00000016004	ENSCGOG00000015975	ENSCGOG00000015968	ENSCGOG00000015966	ENSCGOG00000015965	ENSCGOG00000015964	DIAPH1 (ENSCGOG00000014010)	ENSCGOG00000013987	TRPC7 (ENSCGOG00000013959)	ENSCGOG00000013957	DOCK2 (ENSCGOG00000009296)	hrh2a (ENSCGOG00000009139)	TLX3 (ENSCGOG00000009128)	KCNIP1 (ENSCGOG00000009001)	JAKMIP1 (ENSCGOG00000008789) #21	WFS1 (ENSCGOG00000008779) #22	PPP2R2C (ENSCGOG00000008085) ##23	ENSCGOG00000008071	ENSCGOG00000008069	mif (ENSCGOG00000008053)	ENSCGOG00000008051	ENSCGOG00000008048	ENSCGOG00000008047	ENSCGOG00000008046	ENSCGOG00000008042	ENSCGOG00000008030	CTNND1 (ENSCGOG00000007990)	ENSCGOG00000007985	smtnl1 (ENSCGOG00000007983)	slc43a3b (ENSCGOG00000007801)	SLC43A3 (ENSCGOG00000007794)
Pike perch	MODERN SPECIES	18	ENSSLUG00000004323	ENSSLUG00000004313	ENSSLUG00000004302	ENSSLUG00000004293	ENSSLUG00000004279	pcdh1g32 (ENSSLUG00000004256)	DIAPH1 (ENSSLUG00000004229)	ENSSLUG00000004202	TRPC7 (ENSSLUG00000004148)	ENSSLUG00000004135	DOCK2 (ENSSLUG00000001865)	hrh2a (ENSSLUG00000001391)	TLX3 (ENSSLUG00000001389)	KCNIP1 (ENSSLUG00000001384)	JAKMIP1 (ENSSLUG00000001347) #21	WFS1 (ENSSLUG00000001335) #22	PPP2R2C (ENSSLUG00000001210) ##23	ENSSLUG00000001163	ENSSLUG00000001160	mif (ENSSLUG00000001157)	ENSSLUG00000001153	ENSSLUG00000001149	ENSSLUG00000001145	ENSSLUG00000001143	ENSSLUG00000001139	ENSSLUG00000001133	ENSSLUG00000001127	ENSSLUG00000001123	CTNND1 (ENSSLUG00000000723)	ENSSLUG00000000562	smtnl1 (ENSSLUG00000000559)
Cottioidei	ANCESTRAL SPECIES	9	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b.a.b.a	ENSGT00940000164983.d.a.b	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000163777.a	ENSGT00940000159910.p	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000162287.B.a.c	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b.a.b	ENSGT00940000158505.n.a	ENSGT00940000163832.g.a	ENSGT00940000153668.B
Lumpfish	MODERN SPECIES	1	ENSCLMG00005001954	ENSCLMG00005001957	ENSCLMG00005001959	pcdh1g32 (ENSCLMG00005001960)	DIAPH1 (ENSCLMG00005001964)	ENSCLMG00005001973	TRPC7 (ENSCLMG00005001978)	DOCK2 (ENSCLMG00005002074)	ENSCLMG00005008048	hrh2a (ENSCLMG00005008049)	TLX3 (ENSCLMG00005008051)	ENSCLMG00005008052	KCNIP1 (ENSCLMG00005008054)	ENSCLMG00005008055 #21	JAKMIP1 (ENSCLMG00005008057) #21	WFS1 (ENSCLMG00005008061) #22	PPP2R2C (ENSCLMG00005008069) ##23	ENSCLMG00005008736	MIF (ENSCLMG00005008738)	mif (ENSCLMG00005008739)	ENSCLMG00005008740	ENSCLMG00005008741	ENSCLMG00005008743	ENSCLMG00005008744	ENSCLMG00005008745	ENSCLMG00005008746	CTNND1 (ENSCLMG00005008761)	smtnl1 (ENSCLMG00005010046)	slc43a3b (ENSCLMG00005010047)	rtn4rl2b (ENSCLMG00005010049)	ENSCLMG00005010050
Stickleback	MODERN SPECIES	3	ENSGACG00000017912	ENSGACG00000017911	ENSGACG00000017910	ENSGACG00000017907	ENSGACG00000017905	ENSGACG00000017901	DIAPH1 (ENSGACG00000017896)	ENSGACG00000017895	TRPC7 (ENSGACG00000017891)	DOCK2 (ENSGACG00000017885)	hrh2a (ENSGACG00000017883)	TLX3 (ENSGACG00000017882)	ENSGACG00000017881	ENSGACG00000017880	JAKMIP1 (ENSGACG00000017877) #21	WFS1 (ENSGACG00000017874) #22	PPP2R2C (ENSGACG00000017871) ##23	ENSGACG00000017869	mif (ENSGACG00000017868)	ENSGACG00000017866	ENSGACG00000017865	ENSGACG00000017863	ENSGACG00000017856	ENSGACG00000017851	ENSGACG00000017849	ENSGACG00000017848	CTNND1 (ENSGACG00000017846)	ENSGACG00000017844	ENSGACG00000017843	SLC43A3 (ENSGACG00000017837)	rtn4rl2b (ENSGACG00000017836)
Eupecaria_C	ANCESTRAL SPECIES	12	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000159910.o.a	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.b.b	ENSGT01030000234592.A.b.b.b.b.a.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000175691
Gilthead seabream	MODERN SPECIES	9	ENSSAUG00010004854	ENSSAUG00010004859	ENSSAUG00010004871	ENSSAUG00010004885	ENSSAUG00010004892	ENSSAUG00010004894	DIAPH1 (ENSSAUG00010004901)	ENSSAUG00010005140	TRPC7 (ENSSAUG00010005161)	DOCK2 (ENSSAUG00010006421)	ENSSAUG00010006805	hrh2a (ENSSAUG00010006811)	TLX3 (ENSSAUG00010006817)	KCNIP1 (ENSSAUG00010006824)	JAKMIP1 (ENSSAUG00010006840) #21	WFS1 (ENSSAUG00010006899) #22	PPP2R2C (ENSSAUG00010006931) ##23	ENSSAUG00010008063	mif (ENSSAUG00010008066)	ENSSAUG00010008067	ENSSAUG00010008068	ENSSAUG00010008069	ENSSAUG00010008070	ENSSAUG00010008073	ENSSAUG00010008074	ENSSAUG00010008075	ENSSAUG00010008076	ENSSAUG00010008077	CTNND1 (ENSSAUG00010008079)	ENSSAUG00010008533	smtnl1 (ENSSAUG00010008534)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14	ENSGT00940000164468.a.a.b.a.b.c.b	ENSGT00940000164468.a.a.b.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.b.a.a	ENSGT00940000164468.a.a.b.a.b.d.b	ENSGT00940000164983.d.a.a.a.b	ENSGT00940000164983.d.a.a.a.a.a.b	ENSGT00940000159910.o.a	ENSGT00940000176872	ENSGT01060000248588.a.c.a.a	ENSGT00960000186671	ENSGT00940000154903	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT01100000263491.a.b.a.b.a.a	ENSGT00940000155608	ENSGT00940000165332.A.c	ENSGT01030000234592.A.b.b.b.b.a.b.a	ENSGT00940000164374.B.c.b	ENSGT00940000164685.b	ENSGT00940000164963.c.a	ENSGT00940000165124.c	ENSGT00940000156045.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000175691	ENSGT00940000153668.B
European seabass	MODERN SPECIES	12	ENSDLAG00005003751	ENSDLAG00005018550	ENSDLAG00005015154	ENSDLAG00005017820	ENSDLAG00005026642	ENSDLAG00005034024	ENSDLAG00005032806	ENSDLAG00005021013	ENSDLAG00005020692	ENSDLAG00005020658	ENSDLAG00005018810	ENSDLAG00005018715	ENSDLAG00005018714	ENSDLAG00005018666	JAKMIP1 (ENSDLAG00005017624) #21	ENSDLAG00005017573 #22	PPP2R2C (ENSDLAG00005034222) ##23	ENSDLAG00005029207	ENSDLAG00005033240	ENSDLAG00005017237	ENSDLAG00005028025	ENSDLAG00005017226	ENSDLAG00005017218	ENSDLAG00005017205	ENSDLAG00005015607	ENSDLAG00005015515	ENSDLAG00005015486	ENSDLAG00005015481	ENSDLAG00005015466	ENSDLAG00005015448	ENSDLAG00005015412
Large yellow croaker	MODERN SPECIES		immt (ENSLCRG00005011332)	FGF4 (ENSLCRG00005011327)	ENSLCRG00005011326	FBXO38 (ENSLCRG00005011303)	csnk1a1 (ENSLCRG00005011296)	ENSLCRG00005011294	STOX2 (ENSLCRG00005011292)	enpp6 (ENSLCRG00005011288)	magt1 (ENSLCRG00005010323)	ENSLCRG00005010308	igbp1 (ENSLCRG00005010307)	hrh2a (ENSLCRG00005010306)	TLX3 (ENSLCRG00005010305)	ENSLCRG00005010301	JAKMIP1 (ENSLCRG00005009590) #21	WFS1 (ENSLCRG00005009565) #22	PPP2R2C (ENSLCRG00005008583) ##23	mif (ENSLCRG00005008567)	ENSLCRG00005008565	ENSLCRG00005008564	ENSLCRG00005008562	ENSLCRG00005008560	ENSLCRG00005008558	ENSLCRG00005008556	CTNND1 (ENSLCRG00005007388)	ENSLCRG00005007357	smtnl1 (ENSLCRG00005007356)	slc43a3b (ENSLCRG00005007352)	rtn4rl2b (ENSLCRG00005007348)	zdhhc5b (ENSLCRG00005007344)	tmx2a (ENSLCRG00005007271)
Tiger tail seahorse	MODERN SPECIES	332	ENSHCOG00000011041	ENSHCOG00000011028	ENSHCOG00000011000	ENSHCOG00000010979	pcdh1g32 (ENSHCOG00000010971)	DIAPH1 (ENSHCOG00000010960)	ENSHCOG00000010930	TRPC7 (ENSHCOG00000010928)	DOCK2 (ENSHCOG00000010894)	ENSHCOG00000010824	hrh2a (ENSHCOG00000010815)	TLX3 (ENSHCOG00000010783)	ENSHCOG00000010761	JAKMIP1 (ENSHCOG00000010736) #21	ENSHCOG00000010701	ENSHCOG00000000334 #22	PPP2R2C (ENSHCOG00000010674) ##23	ENSHCOG00000010652	mif (ENSHCOG00000010642)	mif (ENSHCOG00000010563)	ENSHCOG00000010541	ENSHCOG00000010532	ENSHCOG00000010520	ENSHCOG00000010498	ENSHCOG00000010458	cryba1l2 (ENSHCOG00000010445)	slc43a3b (ENSHCOG00000010433)	slc43a3b (ENSHCOG00000010327)	CTNND1 (ENSHCOG00000010241)	ENSHCOG00000010212	smtnl1 (ENSHCOG00000010207)
Pinecone sodierfish	MODERN SPECIES	1	ENSMMDG00005003311	ENSMMDG00005003313	ENSMMDG00005004370	ENSMMDG00005004381	ENSMMDG00005004387	pcdh1g32 (ENSMMDG00005004395)	DIAPH1 (ENSMMDG00005004606)	TRPC7 (ENSMMDG00005008662)	DOCK2 (ENSMMDG00005008756)	ENSMMDG00005008794	hrh2a (ENSMMDG00005008798)	TLX3 (ENSMMDG00005008800)	KCNIP1 (ENSMMDG00005008806)	ENSMMDG00005008812 #21	JAKMIP1 (ENSMMDG00005008823) #21	WFS1 (ENSMMDG00005008838) #22	PPP2R2C (ENSMMDG00005008843) ##23	ENSMMDG00005008853	ENSMMDG00005008854	mif (ENSMMDG00005008856)	ENSMMDG00005008859	ENSMMDG00005008862	ENSMMDG00005008864	ENSMMDG00005008871	ENSMMDG00005008907	ENSMMDG00005008909	CTNND1 (ENSMMDG00005008920)	ENSMMDG00005008998	SLC43A3 (ENSMMDG00005009002)	snx25 (ENSMMDG00005009059)	ENSMMDG00005010587
Cod	MODERN SPECIES	1	ENSGMOG00000019638	ENSGMOG00000027248	ENSGMOG00000032211	ENSGMOG00000019635	ENSGMOG00000035904	ENSGMOG00000035274	ENSGMOG00000029177	ENSGMOG00000019634	ENSGMOG00000019632	ENSGMOG00000031642	ENSGMOG00000019628	ENSGMOG00000025243	ENSGMOG00000019625	ENSGMOG00000033877	JAKMIP1 (ENSGMOG00000019616) #21	ENSGMOG00000032911 #22	PPP2R2C (ENSGMOG00000019608) ##23	ENSGMOG00000023398	ENSGMOG00000022995	ENSGMOG00000019600	ENSGMOG00000019592	ENSGMOG00000019533	ENSGMOG00000027379	ENSGMOG00000025387	ENSGMOG00000009600	ENSGMOG00000019532	ENSGMOG00000006831	ENSGMOG00000019580	ENSGMOG00000019606	ENSGMOG00000033179	ENSGMOG00000026052
Protacanthopterygii	ANCESTRAL SPECIES	28	ENSGT00940000164468.a.a.b.b	ENSGT00940000164468.a.b.a.b	ENSGT00940000164983.d.b	ENSGT00940000164983.d.a.a.d.a	ENSGT00940000163777.a	ENSGT00940000159910	ENSGT01030000235223	ENSGT01060000248588.a.c.a.a	ENSGT00940000154903	ENSGT01090000260190	ENSGT00940000158761.a	ENSGT00940000160629.b	ENSGT00940000158048.c	ENSGT01030000235227	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a ##23	ENSGT01100000263495.A.a.b.a.a.b	ENSGT00940000155608.y	ENSGT00510000052596.a	ENSGT00390000002866.b	ENSGT00950000182987.c.b	ENSGT00390000001610.c.a	ENSGT01000000215456	ENSGT00390000008104	ENSGT00940000157656.a	ENSGT01100000264352	ENSGT00940000164078.a.a	ENSGT00940000157138.a	ENSGT00940000155506.e	ENSGT00390000006983.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	225	ENSGT00940000164468.a.b.a.b	ENSGT00940000164983.d.a.a.d.a.b.b	ENSGT00940000164468.a.a.a.b.b	ENSGT00940000164983.d.b	ENSGT00940000164983.d.a.a.d.a.a	ENSGT00940000163777.a.l.a	ENSGT00940000159910.q.a.b	ENSGT01060000248588.a.c.a.a.h	ENSGT01090000260190.d	ENSGT00940000154903.cc.a.b	ENSGT00940000158761.a.c	ENSGT00940000160629.b.c	ENSGT00940000158048.c.c	ENSGT01030000235227	ENSGT00940000153713.B.c.q #21	ENSGT00390000016928.d.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.a ##23	ENSGT01100000263533.b.b.a.b.a.a.a.b.b	ENSGT01100000263495.A.a.b.a.a.b.a.a	ENSGT00940000155608.y.a	ENSGT00510000052596.a.d	ENSGT00390000002866.b.k	ENSGT00950000182987.c.b.d	ENSGT00390000001610.c.a	ENSGT00940000164078.a.a.c.b	ENSGT00940000157138.a.e	ENSGT00940000155506.e.g	ENSGT00390000006983.b	ENSGT00390000007844.b.f.b	ENSGT00950000182827.F	ENSGT00390000008961.c
Salmoninae_a	ANCESTRAL SPECIES	41	ENSGT00940000159553.b.d	ENSGT00940000163777.b.a.a.f	ENSGT00940000164725.a.a.b.g.b.a	ENSGT00940000165118.b.b	ENSGT00940000159910.q.b.a	ENSGT01030000235223.c	ENSGT01060000248588.a.c.a.a.g	ENSGT00940000154903.cc.a.a	ENSGT01090000260190.c	ENSGT00940000154903.cc.a.b	ENSGT00940000158761.a.c	ENSGT00940000160629.b.c	ENSGT00940000158048.c.c	ENSGT01030000235227	ENSGT00940000153713.B.c.q #21	ENSGT00390000016928.d.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.a ##23	ENSGT01000000218080	ENSGT00940000155608.y.a	ENSGT00510000052596.a.d	ENSGT00390000002866.b.k	ENSGT00950000182987.c.b.d	ENSGT00390000001610.c.a	ENSGT01000000215456.c	ENSGT00940000164078.a.a.c.b	ENSGT00940000157138.a.e	ENSGT00940000155506.e.g	ENSGT00390000006983.b	ENSGT00390000007844.b.f.a	ENSGT00390000008961.d	ENSGT00940000157857.j.a
Salmo	ANCESTRAL SPECIES	47			ENSGT01060000248675.c.b.a.a.a	ENSGT00940000164468.a.a.b.a.b	ENSGT00940000164983.d.a.a.d.a.b.b.b	ENSGT00940000163777.a.l.b	ENSGT00940000159910.q.b.a	ENSGT01030000235223.c	ENSGT00940000159910.q.b.b	ENSGT01060000248588.a.c.a.a.g	ENSGT00940000154903.cc.a.b	ENSGT00940000158761.a.c	ENSGT00940000160629.b.c	ENSGT00940000158048.c.c	ENSGT00940000153713.B.c.q #21	ENSGT00390000016928.d.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.a ##23	ENSGT01030000234576.D.a.a.b.a.a.b.b	ENSGT01100000263533.b.b.a.b.a.a.a.b.a	ENSGT01000000218080	ENSGT00940000155608.y.a	ENSGT00510000052596.a.d	ENSGT00390000002866.b.k	ENSGT00950000182987.c.b.d	ENSGT00390000001610.c.a	ENSGT01000000215456.c	ENSGT00940000164078.a.a.c.b	ENSGT00940000157138.a.e	ENSGT00940000155506.e.g	ENSGT00390000006983.b	ENSGT00390000007844.b.f.a
River trout	MODERN SPECIES	4	ENSSTUG00000001282	ENSSTUG00000001288	ENSSTUG00000001297	ENSSTUG00000001334	ENSSTUG00000001339	ENSSTUG00000001343	ENSSTUG00000001348	ENSSTUG00000001357	ENSSTUG00000001366	TRPC7 (ENSSTUG00000001377)	DOCK2 (ENSSTUG00000001497)	hrh2a (ENSSTUG00000002207)	TLX3 (ENSSTUG00000002214)	ENSSTUG00000002220	JAKMIP1 (ENSSTUG00000002243) #21	WFS1 (ENSSTUG00000002280) #22	PPP2R2C (ENSSTUG00000002304) ##23	ENSSTUG00000002370	ENSSTUG00000002399	ENSSTUG00000002424	ENSSTUG00000002430	mif (ENSSTUG00000002437)	ENSSTUG00000002441	rnf20 (ENSSTUG00000002475)	aldob (ENSSTUG00000002987)	ENSSTUG00000003019	ENSSTUG00000003035	ENSSTUG00000003081	ENSSTUG00000003099	pdgfrb (ENSSTUG00000003118)	ENSSTUG00000003249
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000087518	ENSSSAG00000002589	ENSSSAG00000005829	ENSSSAG00000103204	ENSSSAG00000002709	ENSSSAG00000089391	ENSSSAG00000105004	ENSSSAG00000002740	ENSSSAG00000002965	ENSSSAG00000110081	ENSSSAG00000002971	ENSSSAG00000002982	ENSSSAG00000044330	JAKMIP1 (ENSSSAG00000108515) #21	ENSSSAG00000103649	ENSSSAG00000003066 #22	PPP2R2C (ENSSSAG00000098076) ##23	ENSSSAG00000003674	ENSSSAG00000105809	ENSSSAG00000117641	ENSSSAG00000114217	ENSSSAG00000119194	ENSSSAG00000003692	ENSSSAG00000003698	rnf20 (ENSSSAG00000003720)	ENSSSAG00000003802	ENSSSAG00000003913	ENSSSAG00000003922	ENSSSAG00000110626	ENSSSAG00000098566	cdx1a (ENSSSAG00000109959)
Oncorhynchus	ANCESTRAL SPECIES	34	ENSGT00940000178703	ENSGT00940000166432.d.i.b.a.a.b	ENSGT00940000166432.d.i.b.b.a.b.a	ENSGT00940000165759.c.b.a.a.a.b	ENSGT00940000164468.a.a.b.b.c.b.a.a	ENSGT01030000235223.c	ENSGT01060000248588.a.c.a.a.g	ENSGT00940000154903.cc.a.a	ENSGT01090000260190.c	ENSGT00940000154903.cc.a.b	ENSGT00940000158761.a.c	ENSGT00940000160629.b.c	ENSGT00940000158048.c.c	ENSGT01030000235227	ENSGT00940000153713.B.c.q #21	ENSGT00390000016928.d.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.a.b ##23	ENSGT01100000263533.b.b.a.b.a.a.a.b.b	ENSGT01100000263495.A.a.b.a.a.b.a.a	ENSGT01000000218080	ENSGT00940000155608.y.a	ENSGT00510000052596.a.d	ENSGT00390000002866.b.k	ENSGT00950000182987.c.b.d	ENSGT00390000001610.c.a	ENSGT01000000215456.c	ENSGT00940000164078.a.a.c.b	ENSGT00940000157138.a.e	ENSGT00940000155506.e.g	ENSGT00390000006983.b	ENSGT00390000007844.b.f.a
Oncorhynchus_a	ANCESTRAL SPECIES	34							ENSGT00940000163777.a.l.b	ENSGT00940000159910.q.b.b	ENSGT01060000248588.a.c.a.a.g	ENSGT00940000154903.cc.b	ENSGT00940000158761.a.c	ENSGT00940000160629.b.c	ENSGT00940000158048.c.c	ENSGT01030000235227	ENSGT00940000153713.B.c.q #21	ENSGT00390000016928.d.c #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.a.b ##23	ENSGT01100000263491.a.b.b.c.b.j.a	ENSGT00940000164700.A.m.c.a	ENSGT01100000263533.b.b.a.b.a.a.a.b.a	ENSGT01100000263533.b.b.a.b.a.a.a.b.b	ENSGT01100000263495.A.a.b.a.a.b.a.a	ENSGT01000000218080	ENSGT00940000155608.y.a	ENSGT00510000052596.a.d	ENSGT00390000002866.b.k	ENSGT00950000182987.c.b.d	ENSGT00390000001610.c.a	ENSGT01000000215456.c	ENSGT00940000164078.a.a.c.b	ENSGT00940000157138.a.e
Coho salmon	MODERN SPECIES	6	ENSOKIG00005048381	ENSOKIG00005048378	ENSOKIG00005048373	ENSOKIG00005048358	DIAPH1 (ENSOKIG00005048029)	TRPC7 (ENSOKIG00005047972)	ENSOKIG00005047967	DOCK2 (ENSOKIG00005047853)	ENSOKIG00005047816	HRH2 (ENSOKIG00005047809)	TLX3 (ENSOKIG00005047806)	ENSOKIG00005047797	ENSOKIG00005047786	ENSOKIG00005047780	JAKMIP1 (ENSOKIG00005047703) #21	WFS1 (ENSOKIG00005047688) #22	PPP2R2C (ENSOKIG00005047634) ##23	ENSOKIG00005047617	ENSOKIG00005047616	ENSOKIG00005047607	ENSOKIG00005047595	mif (ENSOKIG00005047593)	ENSOKIG00005047586	rnf20 (ENSOKIG00005047306)	aldob (ENSOKIG00005047251)	ENSOKIG00005047242	ENSOKIG00005047227	ENSOKIG00005047217	ENSOKIG00005047215	cdx1a (ENSOKIG00005047191)	pdgfrb (ENSOKIG00005047175)
Chinook salmon	MODERN SPECIES	213													TLX3 (ENSOTSG00005017145)	ENSOTSG00005017147	JAKMIP1 (ENSOTSG00005017153) #21	WFS1 (ENSOTSG00005017260) #22
Rainbow trout	MODERN SPECIES	23	ENSOMYG00000048734	ENSOMYG00000053769	ENSOMYG00000014031	ENSOMYG00000069045	ENSOMYG00000072241	ENSOMYG00000028015	ENSOMYG00000028082	ENSOMYG00000055834	ENSOMYG00000025929	ENSOMYG00000025451	ENSOMYG00000064118	ENSOMYG00000067207	ENSOMYG00000069958	JAKMIP1 (ENSOMYG00000025293) #21	ENSOMYG00000050263	ENSOMYG00000025234 #22	PPP2R2C (ENSOMYG00000075736) ##23	ENSOMYG00000026730	ENSOMYG00000026687	ENSOMYG00000026716	ENSOMYG00000065565	ENSOMYG00000026628	ENSOMYG00000026604	ENSOMYG00000049566	ENSOMYG00000050141	ENSOMYG00000026553	aldob (ENSOMYG00000026431)	ENSOMYG00000026378	ENSOMYG00000065761	ENSOMYG00000076837	cdx1a (ENSOMYG00000063984)
Huchen	MODERN SPECIES	3342															JAKMIP1 (ENSHHUG00000018561) #21	WFS1 (ENSHHUG00000018318) #22	PPP2R2C (ENSHHUG00000018122) ##23
Salmoninae	ANCESTRAL SPECIES	505										ENSGT00530000063787.A	ENSGT00940000154903.dc	ENSGT00940000158761.a.d	ENSGT00940000160629.b.d	ENSGT00940000158048.c.d	ENSGT00940000153713.B.c.r #21	ENSGT00390000016928.d.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.b ##23	ENSGT01100000263491.a.b.b.c.b.j.b	ENSGT01000000218864	ENSGT00940000155608.y.b	ENSGT00510000052596.a.c	ENSGT00390000002866.b.l	ENSGT00950000182987.c.b.c	ENSGT01000000215456.d	ENSGT00390000008104	ENSGT00940000157656.a	ENSGT00940000164078.a.a.c.a	ENSGT00940000157138.a.f	ENSGT00940000155506.e.h
Salmoninae_a	ANCESTRAL SPECIES	40	ENSGT00940000159553.b.c	ENSGT00940000163777.b.a.a.e	ENSGT00940000164725.a.a.b.g.a.b.a.b	ENSGT00940000164725.a.a.a.a	ENSGT00940000165118.b.a.b	ENSGT00940000164468.a.a.a.a.b.a	ENSGT00940000159910.q.a.b	ENSGT01030000235223.d	ENSGT01060000248588.a.c.a.a.h	ENSGT01090000260190.d	ENSGT00940000154903.dc	ENSGT00940000158761.a.d	ENSGT00940000160629.b.d	ENSGT00940000158048.c.d	ENSGT00940000153713.B.c.r #21	ENSGT00390000016928.d.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.b ##23	ENSGT01100000263491.a.b.b.c.b.j.b	ENSGT00940000164700.A.m.c.b	ENSGT01100000263533.b.b.a.b.a.a.a.a.a	ENSGT01000000218864	ENSGT00940000155608.y.b	ENSGT00510000052596.a.c	ENSGT00390000002866.b.l	ENSGT00950000182987.c.b.c	ENSGT01000000215456.d	ENSGT00390000008104	ENSGT00940000157656.a	ENSGT00940000164078.a.a.c.a	ENSGT00940000157138.a.f	ENSGT00940000155506.e.h
Salmo	ANCESTRAL SPECIES	94	ENSGT01060000248675.c.b.b	ENSGT00940000164468.a.a.b.b.c.b.a.b	ENSGT00940000164468.a.a.b.a.a.a.a.b.b	ENSGT00940000164468.a.a.b.b.c.a.a	ENSGT00940000164468.a.b.a.b	ENSGT00940000164983.d.a.a.d.a.a.a	ENSGT00940000163777.a.l.a	ENSGT00940000159910.q.a.b	ENSGT01060000248588.a.c.a.a.h	ENSGT01090000260190.d	ENSGT00940000154903.dc	ENSGT00940000158761.a.d	ENSGT00940000160629.b.d	ENSGT00940000158048.c.d	ENSGT00940000153713.B.c.r #21	ENSGT00390000016928.d.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.b ##23	ENSGT00940000164700.A.m.c.b	ENSGT01100000263533.b.b.a.b.a.a.a.a.a	ENSGT00940000155608.z	ENSGT00940000155608.y.b	ENSGT00510000052596.a.c	ENSGT00390000002866.b.l	ENSGT00950000182987.c.b.c	ENSGT01000000215456.d	ENSGT00390000008104	ENSGT00940000157656.a	ENSGT00940000164078.a.a.c.a	ENSGT00940000157138.a.f	ENSGT00940000155506.e.h	ENSGT00390000007844.b.f.b
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000116452	ENSSSAG00000098037	ENSSSAG00000002355	ENSSSAG00000116878	ENSSSAG00000120652	ENSSSAG00000107622	ENSSSAG00000002556	ENSSSAG00000106184	ENSSSAG00000005185	ENSSSAG00000044300	ENSSSAG00000044308	ENSSSAG00000044316	ENSSSAG00000111720	JAKMIP1 (ENSSSAG00000114899) #21	ENSSSAG00000033684	ENSSSAG00000044898 #22	PPP2R2C (ENSSSAG00000044931) ##23	ENSSSAG00000046427	ENSSSAG00000046449	ENSSSAG00000087310	ENSSSAG00000083217	ENSSSAG00000046482	ENSSSAG00000046550	ENSSSAG00000046722	ENSSSAG00000116996	ENSSSAG00000046882	ENSSSAG00000046888	ARSI (ENSSSAG00000046895)	ENSSSAG00000046901	cdx1a (ENSSSAG00000046906)	pdgfrb (ENSSSAG00000046918)
River trout	MODERN SPECIES	22	ENSSTUG00000000638	ENSSTUG00000000643	ENSSTUG00000000646	ENSSTUG00000000651	ENSSTUG00000000657	pcdh2g13 (ENSSTUG00000000658)	ENSSTUG00000000664	DIAPH1 (ENSSTUG00000000665)	TRPC7 (ENSSTUG00000000687)	DOCK2 (ENSSTUG00000000989)	ENSSTUG00000005455	hrh2a (ENSSTUG00000005460)	TLX3 (ENSSTUG00000005468)	KCNIP1 (ENSSTUG00000005476)	JAKMIP1 (ENSSTUG00000005513) #21	WFS1 (ENSSTUG00000006249) #22	PPP2R2C (ENSSTUG00000006276) ##23	ENSSTUG00000006367	ENSSTUG00000006382	ENSSTUG00000006399	mif (ENSSTUG00000006412)	mif (ENSSTUG00000006423)	ENSSTUG00000006430	rnf20 (ENSSTUG00000006449)	aldob (ENSSTUG00000006516)	ENSSTUG00000006550	tmco6 (ENSSTUG00000006563)	ARSI (ENSSTUG00000006589)	ENSSTUG00000006596	cdx1a (ENSSTUG00000006598)	pdgfrb (ENSSTUG00000006606)
Oncorhynchus	ANCESTRAL SPECIES	39	ENSGT00940000159553.b.c	ENSGT00940000163777.b.a.a.e	ENSGT00940000164725.a.b.b.a	ENSGT00940000164725.a.a.b.g.b.b	ENSGT00940000165118.a.a.b.a.a.b.a	ENSGT00940000164983.d.a.a.d.a.b.a.b	ENSGT00940000159910.q.a.b	ENSGT01030000235223.d	ENSGT01060000248588.a.c.a.a.h	ENSGT01090000260190.d	ENSGT00940000154903.dc	ENSGT00940000158761.a.d	ENSGT00940000160629.b.d	ENSGT00940000158048.c.d	ENSGT00940000153713.B.c.r #21	ENSGT00390000016928.d.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.b ##23	ENSGT01100000263491.a.b.b.c.b.j.b	ENSGT00940000164700.A.m.c.b	ENSGT01100000263533.b.b.a.b.a.a.a.a.a	ENSGT01000000218864	ENSGT00940000155608.y.b	ENSGT00510000052596.a.c	ENSGT00390000002866.b.l	ENSGT00950000182987.c.b.c	ENSGT01000000215456.d	ENSGT00390000008104	ENSGT00940000157656.a	ENSGT00940000164078.a.a.c.a	ENSGT00940000157138.a.f	ENSGT00940000155506.e.h
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000013863	ENSOMYG00000075156	ENSOMYG00000069061	ENSOMYG00000013633	ENSOMYG00000013501	ENSOMYG00000013426	ENSOMYG00000013397	ENSOMYG00000054955	ENSOMYG00000013342	ENSOMYG00000011015	ENSOMYG00000010668	ENSOMYG00000010667	ENSOMYG00000049827	JAKMIP1 (ENSOMYG00000010292) #21	ENSOMYG00000068504	ENSOMYG00000010044 #22	PPP2R2C (ENSOMYG00000049204) ##23	ENSOMYG00000064211	ENSOMYG00000009900	ENSOMYG00000009896	ENSOMYG00000009880	MIF (ENSOMYG00000070889)	ENSOMYG00000009855	ENSOMYG00000009773	aldob (ENSOMYG00000009709)	ENSOMYG00000060187	ENSOMYG00000009649	ARSI (ENSOMYG00000009614)	ENSOMYG00000066768	cdx1a (ENSOMYG00000009597)	ENSOMYG00000060686
Oncorhynchus_a	ANCESTRAL SPECIES	103					ENSGT00940000164983.d.a.a.d.a.b.a.b	ENSGT00940000159910.q.a.b	ENSGT01030000235223.d	ENSGT01060000248588.a.c.a.a.h	ENSGT01090000260190.d	ENSGT00940000154903.dc	ENSGT00940000154903.cc.a.b	ENSGT00940000158761.a.d	ENSGT00940000160629.b.d	ENSGT00940000158048.c.d	ENSGT00940000153713.B.c.r #21	ENSGT00390000016928.d.d #22	ENSGT00950000182864.a.b.b.a.b.a.a.a.a.a.b ##23	ENSGT01100000263491.a.b.b.c.b.j.b	ENSGT00940000164700.A.m.c.b	ENSGT01100000263533.b.b.a.b.a.a.a.a.a	ENSGT00940000155608.z	ENSGT00940000155608.y.b	ENSGT00510000052596.a.c	ENSGT00390000002866.b.l	ENSGT00950000182987.c.b.c	ENSGT01000000215456.d	ENSGT00390000008104	ENSGT00940000157656.a	ENSGT00940000164078.a.a.c.a	ENSGT00940000157138.a.f	ENSGT00940000155506.e.h
Coho salmon	MODERN SPECIES	10	ENSOKIG00005024038	ENSOKIG00005024026	ENSOKIG00005023955	DIAPH1 (ENSOKIG00005023564)	ENSOKIG00005023535	TRPC7 (ENSOKIG00005023303)	ENSOKIG00005023268	DOCK2 (ENSOKIG00005015501)	ENSOKIG00005015105	hrh2a (ENSOKIG00005015096)	TLX3 (ENSOKIG00005015091)	ENSOKIG00005015082	ENSOKIG00005015075	ENSOKIG00005015068	JAKMIP1 (ENSOKIG00005014990) #21	WFS1 (ENSOKIG00005014974) #22	PPP2R2C (ENSOKIG00005013614) ##23	ENSOKIG00005013523	ENSOKIG00005013513	ENSOKIG00005013477	ENSOKIG00005013457	MIF (ENSOKIG00005013433)	ENSOKIG00005013415	RNF20 (ENSOKIG00005013211)	aldob (ENSOKIG00005013183)	ENSOKIG00005013164	tmco6 (ENSOKIG00005013145)	ARSI (ENSOKIG00005013139)	ENSOKIG00005013131	ENSOKIG00005013128	ENSOKIG00005013066
Chinook salmon	MODERN SPECIES	13	ENSOTSG00005022670	ENSOTSG00005022669	ENSOTSG00005022667	ENSOTSG00005022666	ENSOTSG00005022665	ENSOTSG00005022664	ENSOTSG00005022663	ENSOTSG00005022662	pcdh1g32 (ENSOTSG00005022493)	ENSOTSG00005022490	DOCK2 (ENSOTSG00005022462)	hrh2a (ENSOTSG00005022455)	TLX3 (ENSOTSG00005022451)	ENSOTSG00005022448	JAKMIP1 (ENSOTSG00005022438) #21	WFS1 (ENSOTSG00005022432) #22	PPP2R2C (ENSOTSG00005022425) ##23	ENSOTSG00005022418	ENSOTSG00005022417	ENSOTSG00005022416	ENSOTSG00005022415	ENSOTSG00005022414	mif (ENSOTSG00005022412)	ENSOTSG00005022410	rnf20 (ENSOTSG00005022237)	aldob (ENSOTSG00005022235)	ENSOTSG00005022234	tmco6 (ENSOTSG00005022231)	ARSI (ENSOTSG00005022229)	cdx1a (ENSOTSG00005022228)	pdgfrb (ENSOTSG00005022225)
Huchen	MODERN SPECIES	185									ENSHHUG00000014684	DOCK2 (ENSHHUG00000013284)	hrh2a (ENSHHUG00000013261)	TLX3 (ENSHHUG00000013256)	ENSHHUG00000013252	ENSHHUG00000013238	JAKMIP1 (ENSHHUG00000013222) #21	WFS1 (ENSHHUG00000013207) #22	PPP2R2C (ENSHHUG00000012622) ##23	ENSHHUG00000012610	ENSHHUG00000012605	ENSHHUG00000012599	mif (ENSHHUG00000012531)	ENSHHUG00000012513	rnf20 (ENSHHUG00000012496)	aldob (ENSHHUG00000012415)	ENSHHUG00000012404	tmco6 (ENSHHUG00000012355)	ARSI (ENSHHUG00000012351)	cdx1a (ENSHHUG00000012325)	pdgfrb (ENSHHUG00000012270)	CSF1R (ENSHHUG00000011366)	ENSHHUG00000011334
Northern pike	MODERN SPECIES	3	ENSELUG00000027397	pcdh1g31 (ENSELUG00000017950)	ENSELUG00000026183	ENSELUG00000017927	ENSELUG00000028255	ENSELUG00000026213	ENSELUG00000017752	TRPC7 (ENSELUG00000017696)	DOCK2 (ENSELUG00000000655)	ENSELUG00000017266	hrh2a (ENSELUG00000017240)	TLX3 (ENSELUG00000017208)	ENSELUG00000017195	ENSELUG00000017174	JAKMIP1 (ENSELUG00000017138) #21	WFS1 (ENSELUG00000017051) #22	PPP2R2C (ENSELUG00000017040) ##23	ENSELUG00000016988	ENSELUG00000016954	mif (ENSELUG00000016939)	ENSELUG00000016919	rnf20 (ENSELUG00000016891)	aldob (ENSELUG00000016777)	ENSELUG00000024896	ENSELUG00000016751	tmco6 (ENSELUG00000016735)	ARSI (ENSELUG00000016712)	ENSELUG00000016703	cdx1a (ENSELUG00000016670)	pdgfrb (ENSELUG00000016639)	csf1ra (ENSELUG00000016580)
Otomorpha	ANCESTRAL SPECIES	763															ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22
Clupeiformes	ANCESTRAL SPECIES	516															ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00940000158505.n.a	ENSGT00940000157622.b	ENSGT00940000154495.b.a.a.b	ENSGT00940000165124.b	ENSGT00940000164963.c.a
Denticle herring	MODERN SPECIES	9	gstp1.2 (ENSDCDG00000030214)	COX18 (ENSDCDG00000030215)	igfbp7 (ENSDCDG00000030216)	polr2b (ENSDCDG00000030236)	noa1 (ENSDCDG00000030314)	rest (ENSDCDG00000030315)	b4galt1l (ENSDCDG00000030316)	exosc3 (ENSDCDG00000030319)	ENSDCDG00000030322	nipsnap3a (ENSDCDG00000030328)	ABCA1 (ENSDCDG00000030385)	SLC44A1 (ENSDCDG00000031398)	TBC1D2 (ENSDCDG00000031410)	ELP1 (ENSDCDG00000031438)	JAKMIP1 (ENSDCDG00000031884) #21	WFS1 (ENSDCDG00000032188) #22	rtn4rl2b (ENSDCDG00000032191)	ENSDCDG00000032192	slc43a3b (ENSDCDG00000032193)	smtnl1 (ENSDCDG00000032194)	cryba1l1 (ENSDCDG00000032196)	ENSDCDG00000032197	ENSDCDG00000032198	ENSDCDG00000005657	ENSDCDG00000005663	mxd3 (ENSDCDG00000005673)	prelid1a (ENSDCDG00000005678)	ogt.2 (ENSDCDG00000005917)	ENSDCDG00000008864	ENSDCDG00000008865	kctd12b (ENSDCDG00000008866)
Atlantic herring	MODERN SPECIES	22	ENSCHAG00000008941	zgc:110843 (ENSCHAG00000009122)	CXXC5 (ENSCHAG00000009174)	zgc:92242 (ENSCHAG00000009179)	PSD2 (ENSCHAG00000009199)	PURA (ENSCHAG00000009544)	nrg2b (ENSCHAG00000009552)	ENSCHAG00000009638	eif1ad (ENSCHAG00000009748)	ctsf (ENSCHAG00000009787)	ENSCHAG00000010086	ENSCHAG00000010520	ENSCHAG00000010551	ATG2A (ENSCHAG00000011380)	JAKMIP1 (ENSCHAG00000014359) #21	WFS1 (ENSCHAG00000014976) #22	rtn4rl2b (ENSCHAG00000014983)	ENSCHAG00000014991	zgc:77938 (ENSCHAG00000015019)	ENSCHAG00000015390	ENSCHAG00000015410	ENSCHAG00000015426	ENSCHAG00000015431	ENSCHAG00000015455	ENSCHAG00000015482	ENSCHAG00000015496	pitx2 (ENSCHAG00000000703)	elovl6 (ENSCHAG00000000789)	egf (ENSCHAG00000000913)	lrit3a (ENSCHAG00000001090)	gpm6aa (ENSCHAG00000001184)
Otophysi	ANCESTRAL SPECIES	10	ENSGT00950000182881.a.b.a.b.z.b	ENSGT00390000006124	ENSGT00390000002781	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000160403	ENSGT00940000155317.a.b	ENSGT00950000183159.a.v.b	ENSGT00940000159958.d	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00940000159900	ENSGT00940000160999	ENSGT00740000115581.f	ENSGT00940000156736.c.a	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT01000000220275	ENSGT00940000160863	ENSGT00940000159942.b	ENSGT00940000162571.c.a	ENSGT00940000160971	ENSGT00940000161248	ENSGT00950000183189.a.b.b	ENSGT00950000182974.a.a.a.a	ENSGT00940000156803
Characiphysae	ANCESTRAL SPECIES	21	ENSGT00950000182881.a.b.a.b.z.b	ENSGT00390000006124	ENSGT00390000002781	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000160403	ENSGT00940000155317.a.b	ENSGT00950000183159.a.v.b.a	ENSGT00940000159958.d	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00940000159900	ENSGT00940000160999	ENSGT00740000115581.f	ENSGT00940000156736.c.a	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT01000000220275	ENSGT00940000160863	ENSGT00940000159942.b	ENSGT00940000162571.c.a	ENSGT00940000160971	ENSGT00940000161248	ENSGT00950000183189.a.b.b	ENSGT00950000182974.a.a.a.a	ENSGT00940000156803
Characiphysae_b	ANCESTRAL SPECIES	16	ENSGT00950000182881.a.b.a.b.z.b	ENSGT00390000006124	ENSGT00390000002781	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000160403	ENSGT00940000155317.a.b	ENSGT00950000183159.a.v.b.a	ENSGT00940000159958.d	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00940000159900	ENSGT00940000160999	ENSGT00740000115581.f	ENSGT00940000156736.c.a	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT01000000220275	ENSGT00940000160863	ENSGT00940000159942.b	ENSGT00940000162571.c.a	ENSGT00940000160971	ENSGT00940000161248	ENSGT00950000183189.a.b.b	ENSGT00950000182974.a.a.a.a	ENSGT00940000156803
Characoidei	ANCESTRAL SPECIES	47	ENSGT00950000182881.a.b.a.b.z.b	ENSGT00390000006124	ENSGT00390000002781	ENSGT00940000156526.a	ENSGT00950000182915.a.a.a	ENSGT00950000183201.b.b.b.a	ENSGT00940000160738	ENSGT00940000160403	ENSGT00940000155317.a.b	ENSGT00950000183159.a.v.b.a	ENSGT00940000159958.d	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00940000159900	ENSGT00940000160999	ENSGT00740000115581.f	ENSGT00940000156736.c.a	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT01000000220275	ENSGT00940000160863	ENSGT00940000159942.b
Mexicana tetra	MODERN SPECIES	16	ENSAMXG00000042710	MAML1 (ENSAMXG00000031783)	LTC4S (ENSAMXG00000039412)	PCDH12 (ENSAMXG00000015011)	ENSAMXG00000029657	ENSAMXG00000037418	ENSAMXG00000036476	phox2bb (ENSAMXG00000043803)	smtnl1 (ENSAMXG00000032862)	slc43a3b (ENSAMXG00000007555)	ENSAMXG00000044034	ENSAMXG00000029059	rtn4rl2b (ENSAMXG00000036104)	JAKMIP1 (ENSAMXG00000007587) #21	ENSAMXG00000029800	WFS1 (ENSAMXG00000043676) #22	spon2b (ENSAMXG00000042894)	ENSAMXG00000029316	ENSAMXG00000031655	fgfrl1a (ENSAMXG00000033222)	il1rapl2 (ENSAMXG00000007823)	ENSAMXG00000035761	ENSAMXG00000007836	ENSAMXG00000039535	MYOT (ENSAMXG00000035312)	ENSAMXG00000037144	HDAC3 (ENSAMXG00000042915)	rell2 (ENSAMXG00000041853)	tmem129 (ENSAMXG00000002375)	ENSAMXG00000037375	ENSAMXG00000042910
Red-bellied piranha	MODERN SPECIES	268							PCDH12 (ENSPNAG00000023365)	ENSPNAG00000023357	ENSPNAG00000023342	phox2bb (ENSPNAG00000023315)	smtnl1 (ENSPNAG00000023302)	slc43a3b (ENSPNAG00000003766)	ENSPNAG00000023268	rtn4rl2b (ENSPNAG00000023259)	JAKMIP1 (ENSPNAG00000023245) #21	WFS1 (ENSPNAG00000023188) #22	spon2b (ENSPNAG00000023137)	ENSPNAG00000023115	ENSPNAG00000023093	fgfrl1a (ENSPNAG00000023061)	rnf4 (ENSPNAG00000023046)	selenot2 (ENSPNAG00000022999)	ENSPNAG00000022938	rab33a (ENSPNAG00000022929)	ENSPNAG00000022921
Electric eel	MODERN SPECIES	57									smtnl1 (ENSEEEG00000017280)	slc43a3b (ENSEEEG00000017260)	ENSEEEG00000017257	ENSEEEG00000017256	rtn4rl2b (ENSEEEG00000017255)	ENSEEEG00000017254 #21	JAKMIP1 (ENSEEEG00000017251) #21	WFS1 (ENSEEEG00000017248) #22	spon2b (ENSEEEG00000017247)	ENSEEEG00000017245	fgfrl1a (ENSEEEG00000017244)	rnf4 (ENSEEEG00000017243)	selenot2 (ENSEEEG00000017242)	rab33a (ENSEEEG00000017241)	ENSEEEG00000017240	ENSEEEG00000017238	SLITRK4 (ENSEEEG00000017235)	SLITRK2 (ENSEEEG00000017234)	ENSEEEG00000016996	ENSEEEG00000016995	AFF2 (ENSEEEG00000016993)	ids (ENSEEEG00000016992)	zgc:162941 (ENSEEEG00000016991)
Channel catfish	MODERN SPECIES	27	mgat4b (ENSIPUG00000012887)	canx (ENSIPUG00000012736)	maml1 (ENSIPUG00000012722)	Ltc4s (ENSIPUG00000009679)	pcdh12 (ENSIPUG00000009669)	ENSIPUG00000009653	ENSIPUG00000009629	ENSIPUG00000009620	phox2bb (ENSIPUG00000009610)	smtnl1 (ENSIPUG00000009601)	slc43a3b (ENSIPUG00000009499)	ENSIPUG00000009577	ENSIPUG00000009473	rtn4rl2b (ENSIPUG00000009468)	JAKMIP1 (ENSIPUG00000009398) #21	Wfs1 (ENSIPUG00000009368) #22	spon2b (ENSIPUG00000009340)	si:ch211-255i20.3 (ENSIPUG00000009306)	ENSIPUG00000009263	FGFRL1 (ENSIPUG00000009229)	Rnf4 (ENSIPUG00000009170)	selenot2 (ENSIPUG00000009138)	ENSIPUG00000009121	Klhdc4 (ENSIPUG00000009054)	jph3 (ENSIPUG00000009045)	ENSIPUG00000009038	map1lc3b (ENSIPUG00000009011)	DET1 (ENSIPUG00000008962)	ntrk3a (ENSIPUG00000008905)	ENSIPUG00000008844	klhl25 (ENSIPUG00000008829)
Cyprinoidei	ANCESTRAL SPECIES	9										ENSGT00950000183159.a.v.b	ENSGT00940000159958.d	ENSGT00940000154495.b.a.a.b	ENSGT00940000157622.b	ENSGT00940000158505.n.a	ENSGT00940000153713.B.c #21	ENSGT00390000016928.d #22	ENSGT00940000159900	ENSGT00940000160999.c	ENSGT00740000115581.f	ENSGT00940000156736.c.a	ENSGT00390000010318	ENSGT00390000011725.c	ENSGT00940000160863	ENSGT00940000159942.b	ENSGT00940000160971	ENSGT00940000161248	ENSGT00950000183189.a.b.b	ENSGT00950000182974.a.a.a.a	ENSGT00940000156803	ENSGT00390000017614.f.b	ENSGT00390000017614.f.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	558													ENSGT00940000157622.b	ENSGT00940000158505.n.a.e	ENSGT00940000153713.B.c.v #21	ENSGT00390000016928.d.e #22	ENSGT00940000159900.a	ENSGT00940000160971.d	ENSGT00940000161248.m	ENSGT00940000161248.n	ENSGT00950000183189.a.b.b.c	ENSGT00950000182974.a.a.a.a.r	ENSGT00940000156803.l	ENSGT00390000017614.f.b	ENSGT00390000017614.f.a.a.b.a	ENSGT00390000017614.f.a.b	ENSGT00390000017614.f.a.a.a.b	ENSGT00940000163031.b.b.b	ENSGT00940000158095.i	ENSGT00940000160001.c.b	ENSGT00940000165075.a.b.e
Cyprininae_a	ANCESTRAL SPECIES	530													ENSGT00940000157622.b	ENSGT00940000158505.n.a.e	ENSGT00940000153713.B.c.v #21	ENSGT00390000016928.d.e #22	ENSGT00940000159900.a	ENSGT00940000160999.c.a.a.a	ENSGT00940000160999.c.b	ENSGT00940000156736.c.a.g.b	ENSGT00390000010318.bc.a	ENSGT00390000011725.c.b	ENSGT00940000160863.a.a	ENSGT00940000159942.b.d	ENSGT00940000162571.c.b
Golden-line barbel	MODERN SPECIES	847															JAKMIP1 (ENSSGRG00000006224) #21	WFS1 (ENSSGRG00000006541) #22	spon2b (ENSSGRG00000006542)	ENSSGRG00000006543	ENSSGRG00000006545	ENSSGRG00000006549	ENSSGRG00000006553	rnf4 (ENSSGRG00000006566)	selenot2 (ENSSGRG00000006572)	ENSSGRG00000006573
Common carp reference	MODERN SPECIES	35	ENSCCRG00000050406	spink2.1 (ENSCCRG00000079764)	nkx1.2lb (ENSCCRG00000039732)	ENSCCRG00000055729	ENSCCRG00000065114	ENSCCRG00000016583	ENSCCRG00000076061	ENSCCRG00000058323	ENSCCRG00000063035	phox2bb (ENSCCRG00000067405)	smtnl1 (ENSCCRG00000024906)	slc43a3b (ENSCCRG00000024913)	ENSCCRG00000075341	ENSCCRG00000060690	rtn4rl2b (ENSCCRG00000020977)	ENSCCRG00000081190 #22	ENSCCRG00000008359 #21	spon2b (ENSCCRG00000020179)	ENSCCRG00000020172	fgfrl1a (ENSCCRG00000077649)	rnf4 (ENSCCRG00000076111)	rab33a (ENSCCRG00000072645)	ENSCCRG00000079806	ENSCCRG00000062378	SLITRK4 (ENSCCRG00000022737)	ENSCCRG00000058986	SLITRK2 (ENSCCRG00000051881)	ENSCCRG00000079067	ENSCCRG00000076548	fmr1 (ENSCCRG00000023048)	ENSCCRG00000057327
Goldfish	MODERN SPECIES	5	tmem129 (ENSCARG00000021774)	il1rapl2 (ENSCARG00000021794)	ENSCARG00000021880	p2ry10 (ENSCARG00000021886)	fam199x (ENSCARG00000021896)	cysltr1 (ENSCARG00000021914)	ENSCARG00000021928	ENSCARG00000021937	ENSCARG00000021946	ENSCARG00000021955	phox2bb (ENSCARG00000021973)	smtnl1 (ENSCARG00000021978)	slc43a3b (ENSCARG00000021991)	rtn4rl2b (ENSCARG00000022047)	JAKMIP1 (ENSCARG00000022082) #21	WFS1 (ENSCARG00000022149) #22	spon2b (ENSCARG00000022157)	ENSCARG00000022173	ENSCARG00000022178	fgfrl1a (ENSCARG00000022187)	rnf4 (ENSCARG00000022205)	selenot2 (ENSCARG00000022212)	rab33a (ENSCARG00000022217)	ENSCARG00000022223	ENSCARG00000022230	ENSCARG00000022262	ENSCARG00000022273	ENSCARG00000022279	ENSCARG00000022284	SLITRK4 (ENSCARG00000022287)	ENSCARG00000022293
Cyprininae	ANCESTRAL SPECIES	385										ENSGT00950000183159.a.v.b	ENSGT00940000159958.d.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000159958.d.b	ENSGT00940000158505.n.a.f	ENSGT00940000153713.B.c.u #21	ENSGT00390000016928.d.f #22	ENSGT00940000159900.b	ENSGT00940000160999.c.b	ENSGT00940000160999.c.a.a.a	ENSGT00740000115581.f	ENSGT00940000156736.c.a.g.b	ENSGT00390000010318	ENSGT00390000011725.c.a	ENSGT00940000160863.b	ENSGT00940000159942.b.c	ENSGT00940000162571.c.a	ENSGT00940000160971.c	ENSGT00950000183189.a.b.b.d	ENSGT00950000182974.a.a.a.a.q.a	ENSGT00940000156803.k	ENSGT00390000017614.f.a.a.a.a
Goldfish	MODERN SPECIES	3227													phox2bb (ENSCARG00000062590)	rtn4rl2b (ENSCARG00000062616)	JAKMIP1 (ENSCARG00000062671) #21	WFS1 (ENSCARG00000063106) #22	ENSCARG00000063301	ENSCARG00000063329	fgfrl1a (ENSCARG00000063363)	rnf4 (ENSCARG00000063424)	selenot2 (ENSCARG00000063469)	rab33a (ENSCARG00000063502)	ENSCARG00000063535	ENSCARG00000063548	SLITRK4 (ENSCARG00000063552)	ENSCARG00000063557	ENSCARG00000063565
Cyprininae_a	ANCESTRAL SPECIES	480									ENSGT00390000008738.h	ENSGT00950000183159.a.v.b	ENSGT00940000159958.d.a	ENSGT00940000154495.b.a.a.b	ENSGT00940000159958.d.b	ENSGT00940000158505.n.a.f	ENSGT00940000153713.B.c.u #21	ENSGT00390000016928.d.f #22	ENSGT00940000159900.b	ENSGT00940000160999.c.a.b	ENSGT00940000156736.c.a.g.a	ENSGT00390000010318.bc.b	ENSGT00390000011725.c.a	ENSGT00940000160863.a.b	ENSGT00940000160863.b	ENSGT00940000159942.b.c	ENSGT00940000162571.c.a
Common carp reference	MODERN SPECIES	20	dusp1 (ENSCCRG00000072996)	neurl1b (ENSCCRG00000026548)	ENSCCRG00000056080	uvssa (ENSCCRG00000066129)	ENSCCRG00000079941	nkx1.2lb (ENSCCRG00000050353)	ENSCCRG00000078410	ENSCCRG00000070302	ENSCCRG00000014441	slbp (ENSCCRG00000009478)	ENSCCRG00000061990	phox2bb (ENSCCRG00000024900)	smtnl1 (ENSCCRG00000009326)	rtn4rl2b (ENSCCRG00000036280)	ENSCCRG00000036277 #21	ENSCCRG00000057291 #22	spon2b (ENSCCRG00000080048)	ENSCCRG00000047182	fgfrl1a (ENSCCRG00000057893)	rnf4 (ENSCCRG00000010189)	selenot2 (ENSCCRG00000007073)	rab33a (ENSCCRG00000049260)	ENSCCRG00000007056	ENSCCRG00000061421	ENSCCRG00000060022	SLITRK4 (ENSCCRG00000065823)	ENSCCRG00000071988	ENSCCRG00000057627	ENSCCRG00000004677	fmr1 (ENSCCRG00000049036)	AFF2 (ENSCCRG00000080866)
Golden-line barbel	MODERN SPECIES	146				atoh8 (ENSSGRG00000039140)	tmem129 (ENSSGRG00000039138)	ENSSGRG00000038093	il1rapl2 (ENSSGRG00000038081)	p2ry10 (ENSSGRG00000038080)	ENSSGRG00000038079	fam199x (ENSSGRG00000038077)	cysltr1 (ENSSGRG00000038075)	phox2bb (ENSSGRG00000038074)	rtn4rl2b (ENSSGRG00000038070)	JAKMIP1 (ENSSGRG00000038069) #21	ENSSGRG00000038068 #21	WFS1 (ENSSGRG00000038066) #22	spon2b (ENSSGRG00000038064)	ENSSGRG00000038060	fgfrl1a (ENSSGRG00000038056)	ENSSGRG00000038053	selenot2 (ENSSGRG00000038051)	rab33a (ENSSGRG00000038050)	ENSSGRG00000038048	ENSSGRG00000038044	ENSSGRG00000038038
Zebrafish	MODERN SPECIES	5	LTC4S (ENSDARG00000062598)	MAML1 (ENSDARG00000076466)	canx (ENSDARG00000037488)	mgat4b (ENSDARG00000004115)	mrnip (ENSDARG00000074071)	sqstm1 (ENSDARG00000075014)	tcirg1b (ENSDARG00000105142)	ENSDARG00000103774	dicp2.1 (ENSDARG00000035101)	dicp2.2 (ENSDARG00000099539)	phox2bb (ENSDARG00000091029)	smtnl1 (ENSDARG00000041257)	slc43a3b (ENSDARG00000057949)	rtn4rl2b (ENSDARG00000037495)	JAKMIP1 (ENSDARG00000076090) #21	WFS1 (ENSDARG00000074617) #22	spon2b (ENSDARG00000002732)	ENSDARG00000077880	ENSDARG00000090319	fgfrl1a (ENSDARG00000032617)	rnf4 (ENSDARG00000090993)	selenot2 (ENSDARG00000023220)	rab33a (ENSDARG00000057394)	ENSDARG00000076332	SLITRK4 (ENSDARG00000079781)	ENSDARG00000101918	SLITRK2 (ENSDARG00000006636)	fmr1 (ENSDARG00000037433)	AFF2 (ENSDARG00000052242)	ids (ENSDARG00000071699)	lygl1 (ENSDARG00000056874)
Spotted gar	MODERN SPECIES	670	TMEM128 (ENSLOCG00000009955) #8	lyar (ENSLOCG00000009963) #9	zbtb49 (ENSLOCG00000009974) #10	NSG1 (ENSLOCG00000009986) #11	stx18 (ENSLOCG00000009998) #12	MSX1 (ENSLOCG00000010008) #14	ENSLOCG00000010013	CYTL1 (ENSLOCG00000010022) #15	STK32B (ENSLOCG00000010032) #16	EVC2 (ENSLOCG00000010037) #17	EVC (ENSLOCG00000010056) #18	crmp1 (ENSLOCG00000010077) #19	ENSLOCG00000010099	JAKMIP1 (ENSLOCG00000010109) #21	ENSLOCG00000010117	WFS1 (ENSLOCG00000010122) #22	ppp2r2ca (ENSLOCG00000010130) #23	MAN2B2 (ENSLOCG00000010140) #24	S100P (ENSLOCG00000010147) #28	kiaa0232 (ENSLOCG00000010153) #31	TBC1D14 (ENSLOCG00000010162) #32	ENSLOCG00000010172	ccdc96 (ENSLOCG00000018036) #33	tada2b (ENSLOCG00000010175) #34	grpel1 (ENSLOCG00000010180) #35	SORCS2 (ENSLOCG00000010190) #37	AFAP1 (ENSLOCG00000010207)	ABLIM2 (ENSLOCG00000010240)	ENSLOCG00000010260	ENSLOCG00000010275	htra3a (ENSLOCG00000010288)
Reedfish	MODERN SPECIES	13	OTOP1 (ENSECRG00000003782) #7	ENSECRG00000003800	TMEM128 (ENSECRG00000003805) #8	lyar (ENSECRG00000003810) #9	zbtb49 (ENSECRG00000003816) #10	NSG1 (ENSECRG00000003820) #11	stx18 (ENSECRG00000003825) #12	MSX1 (ENSECRG00000003832) #14	CYTL1 (ENSECRG00000003835) #15	STK32B (ENSECRG00000003838) #16	ENSECRG00000003852 #17	EVC (ENSECRG00000003868) #18	crmp1 (ENSECRG00000003897) #19	JAKMIP1 (ENSECRG00000003936) #21	ENSECRG00000003947	WFS1 (ENSECRG00000000949) #22	ppp2r2ca (ENSECRG00000001116) #23	MAN2B2 (ENSECRG00000001421) #24	S100P (ENSECRG00000001461) #28	kiaa0232 (ENSECRG00000001480) #31	TBC1D14 (ENSECRG00000001527) #32	ENSECRG00000001572	ccdc96 (ENSECRG00000001586) #33	tada2b (ENSECRG00000001599) #34	grpel1 (ENSECRG00000001615) #35	ENSECRG00000001624	SORCS2 (ENSECRG00000001726) #37	AFAP1 (ENSECRG00000001962)	ABLIM2 (ENSECRG00000002064)	tec (ENSECRG00000002195)	ENSECRG00000002231
Elephant shark	MODERN SPECIES	1542															ENSCMIG00000001517	WFS1 (ENSCMIG00000001504) #22	PPP2R2C (ENSCMIG00000001037) #23	MAN2B2 (ENSCMIG00000000817) #24	ENSCMIG00000000754	ENSCMIG00000000741	kiaa0232 (ENSCMIG00000000574) #31	TBC1D14 (ENSCMIG00000000557) #32	ENSCMIG00000000543	jade1 (ENSCMIG00000000525)	SCLT1 (ENSCMIG00000000439)	zgc:77739 (ENSCMIG00000000401)	ENSCMIG00000000394	ENSCMIG00000000385	ENSCMIG00000000377	ENSCMIG00000000368	ENSCMIG00000000343