Rodentia ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00530000063866.f.a ENSGT00390000013802.v.b ##26 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.p ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Rodentia_B ANCESTRAL SPECIES 5 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Myomorpha ANCESTRAL SPECIES 4 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Muroidea ANCESTRAL SPECIES 2 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Muroidea_A ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00530000063866.f.a ENSGT00390000013802.u #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 Murinae ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00530000063866.f.a.a.a ENSGT00530000063866.f.a.b ENSGT00390000013802.u #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 Mus ANCESTRAL SPECIES ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Mus_A ANCESTRAL SPECIES 16 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Mus_B ANCESTRAL SPECIES 16 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u.a #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Mouse MODERN SPECIES 10 Gng3 (ENSMUSG00000071658) #7 Bscl2 (ENSMUSG00000071657) #8 Lrrn4cl (ENSMUSG00000071656) #9 Ubxn1 (ENSMUSG00000071655) #10 Uqcc3 (ENSMUSG00000071654) #11 Lbhd1 (ENSMUSG00000096740) #12 1810009A15Rik (ENSMUSG00000071653) #13 Gm49416 (ENSMUSG00000116347) #14 Ints5 (ENSMUSG00000071652) #15 Ganab (ENSMUSG00000071650) #16 B3gat3 (ENSMUSG00000071649) #17 Rom1 (ENSMUSG00000071648) #18 Eml3 (ENSMUSG00000071647) #19 Mta2 (ENSMUSG00000071646) #20 Tut1 (ENSMUSG00000071645) #21 Eef1g (ENSMUSG00000071644) #22 Ahnak (ENSMUSG00000069833) #23 Scgb1a1 (ENSMUSG00000024653) #24 Asrgl1 (ENSMUSG00000024654) #25 Scgb2a2 (ENSMUSG00000096872) #26 Incenp (ENSMUSG00000024660) #27 Fth1 (ENSMUSG00000024661) #28 Best1 (ENSMUSG00000037418) #29 Rab3il1 (ENSMUSG00000024663) #30 Fads3 (ENSMUSG00000024664) #31 Fads2 (ENSMUSG00000024665) #32 Fads1 (ENSMUSG00000010663) #33 Fen1 (ENSMUSG00000024742) #34 Tmem258 (ENSMUSG00000036372) #35 Myrf (ENSMUSG00000036098) #36 Dagla (ENSMUSG00000035735) #37 Mus_C ANCESTRAL SPECIES 25 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u.a #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2399 Uqcc3 (ENSMSIG00000030087) #11 ENSMSIG00000030086 1810009A15Rik (ENSMSIG00000030082) #13 Ints5 (ENSMSIG00000030081) #15 Ganab (ENSMSIG00000030073) #16 B3gat3 (ENSMSIG00000030069) #17 Rom1 (ENSMSIG00000030067) #18 Eml3 (ENSMSIG00000030059) #19 Mta2 (ENSMSIG00000030052) #20 Tut1 (ENSMSIG00000030047) #21 ENSMSIG00000030044 #22 ENSMSIG00000030038 #23 ENSMSIG00000030024 ##23 Scgb1a1 (ENSMSIG00000030022) #24 Asrgl1 (ENSMSIG00000030021) #25 Steppe mouse MODERN SPECIES 38 Gfra1 (ENSMSIG00000028497) Ccdc172 (ENSMSIG00000028482) Pnlip (ENSMSIG00000028475) Pnliprp1 (ENSMSIG00000028468) Pnliprp2 (ENSMSIG00000028454) 1700019N19Rik (ENSMSIG00000028440) Hspa12a (ENSMSIG00000028425) Eno4 (ENSMSIG00000028394) Shtn1 (ENSMSIG00000028359) ENSMSIG00000028327 #22 Vax1 (ENSMSIG00000028320) ENSMSIG00000028314 Kcnk18 (ENSMSIG00000028309) Slc18a2 (ENSMSIG00000028291) Pdzd8 (ENSMSIG00000028285) Emx2 (ENSMSIG00000028276) Rab11fip2 (ENSMSIG00000028250) Fam204a (ENSMSIG00000028227) Prlhr (ENSMSIG00000028226) Cacul1 (ENSMSIG00000028208) Nanos1 (ENSMSIG00000028205) Eif3a (ENSMSIG00000028178) ENSMSIG00000028172 Dennd10 (ENSMSIG00000028163) Sfxn4 (ENSMSIG00000028157) spretus MODERN SPECIES 10 Hnrnpul2 (MGP_SPRETEiJ_G0023569) Gng3 (MGP_SPRETEiJ_G0023570) #7 Bscl2 (MGP_SPRETEiJ_G0023571) #8 Lrrn4cl (MGP_SPRETEiJ_G0023572) #9 Ubxn1 (MGP_SPRETEiJ_G0023573) #10 Uqcc3 (MGP_SPRETEiJ_G0023574) #11 MGP_SPRETEiJ_G0023575 1810009A15Rik (MGP_SPRETEiJ_G0023576) #13 Ints5 (MGP_SPRETEiJ_G0023577) #15 Ganab (MGP_SPRETEiJ_G0023578) #16 B3gat3 (MGP_SPRETEiJ_G0023579) #17 Rom1 (MGP_SPRETEiJ_G0023580) #18 Eml3 (MGP_SPRETEiJ_G0023581) #19 Mta2 (MGP_SPRETEiJ_G0023582) #20 Tut1 (MGP_SPRETEiJ_G0023583) #21 Eef1g (MGP_SPRETEiJ_G0023584) #22 Ahnak (MGP_SPRETEiJ_G0023585) #23 Scgb1a1 (MGP_SPRETEiJ_G0023586) #24 Asrgl1 (MGP_SPRETEiJ_G0023587) #25 Scgb2a2 (MGP_SPRETEiJ_G0023588) #26 Incenp (MGP_SPRETEiJ_G0023589) #27 Fth1 (MGP_SPRETEiJ_G0023590) #28 Best1 (MGP_SPRETEiJ_G0023591) #29 Rab3il1 (MGP_SPRETEiJ_G0023592) #30 Fads3 (MGP_SPRETEiJ_G0023593) #31 Fads2 (MGP_SPRETEiJ_G0023594) #32 Fads1 (MGP_SPRETEiJ_G0023595) #33 Fen1 (MGP_SPRETEiJ_G0023596) #34 Tmem258 (MGP_SPRETEiJ_G0023597) #35 Myrf (MGP_SPRETEiJ_G0023598) #36 Dagla (MGP_SPRETEiJ_G0023599) #37 Ryukyu mouse MODERN SPECIES 10 Hnrnpul2 (MGP_CAROLIEiJ_G0022656) Gng3 (MGP_CAROLIEiJ_G0022657) #7 Bscl2 (MGP_CAROLIEiJ_G0022658) #8 Lrrn4cl (MGP_CAROLIEiJ_G0022659) #9 Ubxn1 (MGP_CAROLIEiJ_G0022660) #10 Uqcc3 (MGP_CAROLIEiJ_G0022661) #11 MGP_CAROLIEiJ_G0022662 MGP_CAROLIEiJ_G0022663 #13 Ints5 (MGP_CAROLIEiJ_G0022664) #15 Ganab (MGP_CAROLIEiJ_G0022665) #16 B3gat3 (MGP_CAROLIEiJ_G0022666) #17 Rom1 (MGP_CAROLIEiJ_G0022667) #18 Eml3 (MGP_CAROLIEiJ_G0022668) #19 Mta2 (MGP_CAROLIEiJ_G0022669) #20 Tut1 (MGP_CAROLIEiJ_G0022670) #21 Eef1g (MGP_CAROLIEiJ_G0022671) #22 MGP_CAROLIEiJ_G0022672 ##23 Scgb1a1 (MGP_CAROLIEiJ_G0022673) #24 Asrgl1 (MGP_CAROLIEiJ_G0022674) #25 Incenp (MGP_CAROLIEiJ_G0022675) #27 Fth1 (MGP_CAROLIEiJ_G0022676) #28 Best1 (MGP_CAROLIEiJ_G0022677) #29 Rab3il1 (MGP_CAROLIEiJ_G0022678) #30 Fads3 (MGP_CAROLIEiJ_G0022679) #31 Fads2 (MGP_CAROLIEiJ_G0022680) #32 Fads1 (MGP_CAROLIEiJ_G0022681) #33 Fen1 (MGP_CAROLIEiJ_G0022682) #34 Tmem258 (MGP_CAROLIEiJ_G0022683) #35 Myrf (MGP_CAROLIEiJ_G0022684) #36 Dagla (MGP_CAROLIEiJ_G0022685) #37 Syt7 (MGP_CAROLIEiJ_G0022686) Shrew mouse MODERN SPECIES Zbtb3 (MGP_PahariEiJ_G0014149) Ttc9c (MGP_PahariEiJ_G0014150) Hnrnpul2 (MGP_PahariEiJ_G0014151) Gng3 (MGP_PahariEiJ_G0014152) #7 Bscl2 (MGP_PahariEiJ_G0014153) #8 Lrrn4cl (MGP_PahariEiJ_G0014154) #9 Ubxn1 (MGP_PahariEiJ_G0014155) #10 Uqcc3 (MGP_PahariEiJ_G0014156) #11 Ints5 (MGP_PahariEiJ_G0014158) #15 Ganab (MGP_PahariEiJ_G0014159) #16 B3gat3 (MGP_PahariEiJ_G0014160) #17 Rom1 (MGP_PahariEiJ_G0014161) #18 Eml3 (MGP_PahariEiJ_G0014162) #19 Mta2 (MGP_PahariEiJ_G0014163) #20 Tut1 (MGP_PahariEiJ_G0014164) #21 Eef1g (MGP_PahariEiJ_G0014165) #22 MGP_PahariEiJ_G0014166 #23 Scgb1a1 (MGP_PahariEiJ_G0014167) #24 Asrgl1 (MGP_PahariEiJ_G0014168) #25 Incenp (MGP_PahariEiJ_G0014169) #27 Fth1 (MGP_PahariEiJ_G0014170) #28 Best1 (MGP_PahariEiJ_G0014171) #29 Rab3il1 (MGP_PahariEiJ_G0014172) #30 Fads3 (MGP_PahariEiJ_G0014173) #31 Fads2 (MGP_PahariEiJ_G0014174) #32 Fads1 (MGP_PahariEiJ_G0014175) #33 Fen1 (MGP_PahariEiJ_G0014176) #34 Tmem258 (MGP_PahariEiJ_G0014177) #35 Myrf (MGP_PahariEiJ_G0014178) #36 MGP_PahariEiJ_G0014179 Syt7 (MGP_PahariEiJ_G0014180) Rat DUPLICATION Rat MODERN SPECIES Polr2g (ENSRNOG00000019439) Ttc9c (ENSRNOG00000019464) Hnrnpul2 (ENSRNOG00000019507) Gng3 (ENSRNOG00000019570) #7 Bscl2 (ENSRNOG00000052393) #8 Ubxn1 (ENSRNOG00000019666) #10 Uqcc3 (ENSRNOG00000045561) #11 Gm49403 (ENSRNOG00000064559) C1h11orf98 (ENSRNOG00000019701) #13 Ints5 (ENSRNOG00000026005) #15 Ganab (ENSRNOG00000019724) #16 B3gat3 (ENSRNOG00000019873) #19 Rom1 (ENSRNOG00000019858) #18 Mta2 (ENSRNOG00000019913) #20 Tut1 (ENSRNOG00000020047) #21 Eef1g (ENSRNOG00000020075) #22 Ahnak (ENSRNOG00000057569) #23 Scgb1a1 (ENSRNOG00000020196) #24 Asrgl1 (ENSRNOG00000020202) #25 Scgb1d2 (ENSRNOG00000020294) Scgb1d4 (ENSRNOG00000020301) Scgb2a1 (ENSRNOG00000020305) #26 AABR07006242.1 (ENSRNOG00000028909) Scgb2a1 (ENSRNOG00000023151) #26 ENSRNOG00000062718 Incenp (ENSRNOG00000032929) #27 Fth1 (ENSRNOG00000022619) #28 Best1 (ENSRNOG00000020346) #29 AABR07006255.1 (ENSRNOG00000036633) Rab3il1 (ENSRNOG00000020349) #30 Fads3 (ENSRNOG00000020385) #31 Rat DUPLICATION Rat MODERN SPECIES 4 Igsf8 (ENSRNOG00000007604) Atp1a2 (ENSRNOG00000007290) Atp1a4 (ENSRNOG00000032378) Casq1 (ENSRNOG00000006930) Pea15 (ENSRNOG00000046996) Dcaf8 (ENSRNOG00000006785) LOC102548286 (ENSRNOG00000057116) Copa (ENSRNOG00000006247) Ncstn (ENSRNOG00000005355) Nhlh1 (ENSRNOG00000005166) Vangl2 (ENSRNOG00000004889) Slamf6 (ENSRNOG00000038286) Cd84 (ENSRNOG00000022884) Slamf1 (ENSRNOG00000059073) Cd48 (ENSRNOG00000004737) ENSRNOG00000062700 #22 Slamf7 (ENSRNOG00000023209) Ly9 (ENSRNOG00000025069) Cd244 (ENSRNOG00000064255) Cd244 (ENSRNOG00000068754) Itln1 (ENSRNOG00000004678) LOC100359583 (ENSRNOG00000025731) F11r (ENSRNOG00000004414) ENSRNOG00000068856 Arhgap30 (ENSRNOG00000004192) Tstd1 (ENSRNOG00000004255) Nectin4 (ENSRNOG00000004029) Klhdc9 (ENSRNOG00000004022) Nit1 (ENSRNOG00000003881) Dedd (ENSRNOG00000003779) Pfdn2 (ENSRNOG00000066932) Rat MODERN SPECIES 15 Pusl1 (ENSRNOG00000022354) Ints11 (ENSRNOG00000019712) Cptp (ENSRNOG00000022455) Tas1r3 (ENSRNOG00000019589) Dvl1 (ENSRNOG00000019423) Mxra8 (ENSRNOG00000019244) Ccnl2 (ENSRNOG00000018691) Mrpl20 (ENSRNOG00000018647) Ankrd65 (ENSRNOG00000043331) Tmem88b (ENSRNOG00000036869) Vwa1 (ENSRNOG00000018338) Atad3a (ENSRNOG00000018118) Tmem240 (ENSRNOG00000066137) Ssu72 (ENSRNOG00000017829) LOC100364191 (ENSRNOG00000030447) ENSRNOG00000065253 #22 Mib2 (ENSRNOG00000017564) Mmp23 (ENSRNOG00000017477) Cdk11b (ENSRNOG00000017213) Slc35e2b (ENSRNOG00000017075) Nadk (ENSRNOG00000016936) Gnb1 (ENSRNOG00000016638) Tmem52 (ENSRNOG00000016618) Cfap74 (ENSRNOG00000023627) Gabrd (ENSRNOG00000016385) Prkcz (ENSRNOG00000015480) Faap20 (ENSRNOG00000036876) Ski (ENSRNOG00000055340) Morn1 (ENSRNOG00000014642) Rer1 (ENSRNOG00000014270) Pex10 (ENSRNOG00000024012) Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00940000155807.a #34 ENSGT00520000061410 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 16 Hnrnpul2 (ENSMOCG00000020000) Gng3 (ENSMOCG00000020628) #7 ENSMOCG00000009001 Lrrn4cl (ENSMOCG00000009512) #9 Ubxn1 (ENSMOCG00000010707) #10 Uqcc3 (ENSMOCG00000009973) #11 ENSMOCG00000016664 ENSMOCG00000017433 #13 Ints5 (ENSMOCG00000017768) #15 Ganab (ENSMOCG00000021495) #16 B3gat3 (ENSMOCG00000011586) #17 Rom1 (ENSMOCG00000012581) #18 Eml3 (ENSMOCG00000013304) #19 Mta2 (ENSMOCG00000001999) #20 Tut1 (ENSMOCG00000015834) #21 ENSMOCG00000019677 #22 ENSMOCG00000012405 ##23 Scgb1a1 (ENSMOCG00000014419) #24 Asrgl1 (ENSMOCG00000022216) #25 Fam111a (ENSMOCG00000017922) Gm4952 (ENSMOCG00000015076) Glyat (ENSMOCG00000016115) Keg1 (ENSMOCG00000012983) Cntf (ENSMOCG00000016049) Zfp91 (ENSMOCG00000018468) Lpxn (ENSMOCG00000019266) Or5b21 (ENSMOCG00000002067) ENSMOCG00000009033 ENSMOCG00000017684 Or9q1 (ENSMOCG00000009793) Tle4 (ENSMOCG00000011846) Prairie vole MODERN SPECIES 81 Eif3m (ENSMOCG00000020753) Wt1 (ENSMOCG00000006225) Them7 (ENSMOCG00000010419) Rcn1 (ENSMOCG00000011897) Pax6 (ENSMOCG00000017625) Elp4 (ENSMOCG00000009942) Immp1l (ENSMOCG00000000239) Dnajc24 (ENSMOCG00000003631) ENSMOCG00000009178 Mpped2 (ENSMOCG00000002797) Arl14ep (ENSMOCG00000016817) Fshb (ENSMOCG00000019709) Kcna4 (ENSMOCG00000010908) Mettl15 (ENSMOCG00000014905) Kif18a (ENSMOCG00000019106) ENSMOCG00000012556 #22 BDNF (ENSMOCG00000000420) Lin7c (ENSMOCG00000017113) Lgr4 (ENSMOCG00000016806) Ccdc34 (ENSMOCG00000007200) Bbox1 (ENSMOCG00000001592) Fibin (ENSMOCG00000009161) Slc5a12 (ENSMOCG00000015104) Ano3 (ENSMOCG00000021978) Muc15 (ENSMOCG00000015142) Qser1 (ENSMOCG00000001478) Depdc7 (ENSMOCG00000016709) Tcp11l1 (ENSMOCG00000017298) Cstf3 (ENSMOCG00000017583) Hipk3 (ENSMOCG00000002204) D430041D05Rik (ENSMOCG00000003074) Northern American deer mouse MODERN SPECIES Ttc9c (ENSPEMG00000026108) Hnrnpul2 (ENSPEMG00000015546) Gng3 (ENSPEMG00000028724) #7 Bscl2 (ENSPEMG00000031381) #8 Lrrn4cl (ENSPEMG00000016106) #9 Ubxn1 (ENSPEMG00000015778) #10 Uqcc3 (ENSPEMG00000030804) #11 1810009A15Rik (ENSPEMG00000031275) #13 Ints5 (ENSPEMG00000004838) #15 Ganab (ENSPEMG00000003185) #16 B3gat3 (ENSPEMG00000009881) #17 Rom1 (ENSPEMG00000003110) #18 Eml3 (ENSPEMG00000008367) #19 Mta2 (ENSPEMG00000007490) #20 Tut1 (ENSPEMG00000018332) #21 Eef1g (ENSPEMG00000004247) #22 ENSPEMG00000019243 ##23 ENSPEMG00000026154 #23 ENSPEMG00000024701 Scgb1a1 (ENSPEMG00000009557) #24 Asrgl1 (ENSPEMG00000018019) #25 ENSPEMG00000028067 Incenp (ENSPEMG00000008252) #27 ENSPEMG00000020638 Fth1 (ENSPEMG00000017564) #28 ENSPEMG00000012703 #29 Rab3il1 (ENSPEMG00000011822) #30 Fads3 (ENSPEMG00000012107) #31 Fads2 (ENSPEMG00000015890) #32 Fads1 (ENSPEMG00000008265) #33 Fen1 (ENSPEMG00000009788) #34 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00400000022873 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a.d #28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 ENSGT00520000061410 ENSGT00940000155807.a #34 ENSGT00390000010089.f #35 ENSGT00530000063626.a #36 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 401 Gng3 (ENSCGRG00001014012) #7 Bscl2 (ENSCGRG00001015829) #8 Lrrn4cl (ENSCGRG00001009869) #9 Ubxn1 (ENSCGRG00001006327) #10 Uqcc3 (ENSCGRG00001016702) #11 ENSCGRG00001017126 1810009A15Rik (ENSCGRG00001020427) #13 Ints5 (ENSCGRG00001020963) #15 Ganab (ENSCGRG00001021832) #16 B3GAT3 (ENSCGRG00001023184) #17 Rom1 (ENSCGRG00001013656) #18 Eml3 (ENSCGRG00001015050) #19 Mta2 (ENSCGRG00001005728) #20 Tut1 (ENSCGRG00001017583) #21 ENSCGRG00001010100 ENSCGRG00001013631 #22 Ahnak (ENSCGRG00001009772) #23 Scgb1a1 (ENSCGRG00001017835) #24 Asrgl1 (ENSCGRG00001019390) #25 Scgb2a2 (ENSCGRG00001015765) #26 Incenp (ENSCGRG00001019028) #27 FTH1 (ENSCGRG00001020220) #28 ENSCGRG00001014139 #29 Rab3il1 (ENSCGRG00001015063) #30 Fads3 (ENSCGRG00001017095) #31 Fads2 (ENSCGRG00001013858) #32 Fads1 (ENSCGRG00001018831) #33 Fen1 (ENSCGRG00001009889) #34 ENSCGRG00001013240 #35 Myrf (ENSCGRG00001021116) #36 Dagla (ENSCGRG00001004102) #37 Chinese hamster chok1gshd MODERN SPECIES 17 ENSCGRG00001011185 Derl1 (ENSCGRG00001011500) ENSCGRG00001011707 #22 Zhx2 (ENSCGRG00001013209) ENSCGRG00001012456 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 682 ENSMAUG00000016675 #22 Htr1f (ENSMAUG00000006269) Cggbp1 (ENSMAUG00000000993) Zfp654 (ENSMAUG00000000720) ENSMAUG00000012990 Csnka2ip (ENSMAUG00000001425) Epha3 (ENSMAUG00000011923) ENSMAUG00000020620 Stx19 (ENSMAUG00000004341) Arl13b (ENSMAUG00000017043) Nsun3 (ENSMAUG00000013661) ENSMAUG00000000427 Epha6 (ENSMAUG00000005573) Arl6 (ENSMAUG00000016932) ENSMAUG00000003633 Riox2 (ENSMAUG00000015559) Golden Hamster MODERN SPECIES 658 Scg3 (ENSMAUG00000009353) Lysmd2 (ENSMAUG00000006540) Tmod2 (ENSMAUG00000010992) Tmod3 (ENSMAUG00000016527) Leo1 (ENSMAUG00000021013) ENSMAUG00000002809 ENSMAUG00000007608 Gnb5 (ENSMAUG00000008570) Myo5c (ENSMAUG00000019952) Myo5a (ENSMAUG00000001195) ENSMAUG00000013200 Atosa (ENSMAUG00000017090) Onecut1 (ENSMAUG00000017863) Wdr72 (ENSMAUG00000019773) Unc13c (ENSMAUG00000014928) ENSMAUG00000012949 #22 Rsl24d1 (ENSMAUG00000011146) Rab27a (ENSMAUG00000013740) Pigb (ENSMAUG00000009724) Ccpg1 (ENSMAUG00000021179) Pierce2 (ENSMAUG00000021207) Dnaaf4 (ENSMAUG00000012975) Pygo1 (ENSMAUG00000007751) Prtg (ENSMAUG00000021146) Nedd4 (ENSMAUG00000003802) Rfx7 (ENSMAUG00000016583) Tex9 (ENSMAUG00000004928) Mns1 (ENSMAUG00000019303) Zfp280d (ENSMAUG00000019648) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 993 Hnrnpul2 (ENSNGAG00000012005) Gng3 (ENSNGAG00000017324) #7 Bscl2 (ENSNGAG00000001576) #8 Lrrn4cl (ENSNGAG00000019480) #9 Ubxn1 (ENSNGAG00000019771) #10 Uqcc3 (ENSNGAG00000012681) #11 ENSNGAG00000013023 1810009A15Rik (ENSNGAG00000016918) #13 Ints5 (ENSNGAG00000020876) #15 Ganab (ENSNGAG00000001471) #16 B3gat3 (ENSNGAG00000011046) #17 Rom1 (ENSNGAG00000011407) #18 Eml3 (ENSNGAG00000020054) #19 Mta2 (ENSNGAG00000001070) #20 Tut1 (ENSNGAG00000002988) #21 ENSNGAG00000019856 #22 Ahnak (ENSNGAG00000010664) #23 Scgb1a1 (ENSNGAG00000015223) #24 Asrgl1 (ENSNGAG00000017941) #25 Upper Galilee mountains blind mole rat MODERN SPECIES 832 ENSNGAG00000000678 #22 Tnrc6b (ENSNGAG00000021294) Adsl (ENSNGAG00000016522) Sgsm3 (ENSNGAG00000021377) ENSNGAG00000019442 ENSNGAG00000012273 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 60 ENSJJAG00000008957 Hnrnpul2 (ENSJJAG00000011206) Gng3 (ENSJJAG00000015400) #7 ENSJJAG00000019301 #8 Ubxn1 (ENSJJAG00000012631) #10 Uqcc3 (ENSJJAG00000022865) #11 ENSJJAG00000011273 1810009A15Rik (ENSJJAG00000010598) #13 Ints5 (ENSJJAG00000013000) #15 Ganab (ENSJJAG00000024016) #16 B3gat3 (ENSJJAG00000023873) #17 Rom1 (ENSJJAG00000016209) #18 Eml3 (ENSJJAG00000001007) #19 Mta2 (ENSJJAG00000001163) #20 Tut1 (ENSJJAG00000022329) #21 Eef1g (ENSJJAG00000019511) #22 ENSJJAG00000015059 #23 Scgb1a1 (ENSJJAG00000013224) #24 Asrgl1 (ENSJJAG00000021275) #25 Lesser Egyptian jerboa MODERN SPECIES 45 ENSJJAG00000022712 Gxylt2 (ENSJJAG00000013774) Shq1 (ENSJJAG00000017611) Rybp (ENSJJAG00000017045) Prok2 (ENSJJAG00000021320) Gpr27 (ENSJJAG00000011153) Eif4e3 (ENSJJAG00000002638) Foxp1 (ENSJJAG00000022621) Mdfic2 (ENSJJAG00000012963) Mitf (ENSJJAG00000018472) Frmd4b (ENSJJAG00000023390) Minar2 (ENSJJAG00000000279) Adamts19 (ENSJJAG00000021431) Isoc1 (ENSJJAG00000019157) Slc27a6 (ENSJJAG00000020519) ENSJJAG00000017710 #22 Fbn2 (ENSJJAG00000020592) Slc12a2 (ENSJJAG00000019580) ENSJJAG00000017426 Ctxn3 (ENSJJAG00000011014) Prrc1 (ENSJJAG00000011454) Crhbp (ENSJJAG00000010630) S100z (ENSJJAG00000013195) ENSJJAG00000018088 F2rl1 (ENSJJAG00000005361) F2r (ENSJJAG00000021467) Iqgap2 (ENSJJAG00000023927) F2rl2 (ENSJJAG00000020545) Sv2c (ENSJJAG00000012121) Poc5 (ENSJJAG00000019666) Ankdd1b (ENSJJAG00000013237) Kangaroo rat MODERN SPECIES 436 Zbtb3 (ENSDORG00000015697) Ttc9c (ENSDORG00000028105) Hnrnpul2 (ENSDORG00000008678) Gng3 (ENSDORG00000025670) #7 ENSDORG00000024721 Ubxn1 (ENSDORG00000009406) #10 Uqcc3 (ENSDORG00000025423) #11 1810009A15Rik (ENSDORG00000025730) #13 Ints5 (ENSDORG00000025017) #15 Ganab (ENSDORG00000011363) #16 B3gat3 (ENSDORG00000004024) #17 Rom1 (ENSDORG00000004023) #18 Eml3 (ENSDORG00000004021) #19 Mta2 (ENSDORG00000004019) #20 Tut1 (ENSDORG00000004018) #21 Eef1g (ENSDORG00000004017) #22 ENSDORG00000026538 ##23 Asrgl1 (ENSDORG00000014041) #25 ENSDORG00000026990 Incenp (ENSDORG00000009799) #27 Fth1 (ENSDORG00000024132) #28 ENSDORG00000027094 #29 ENSDORG00000001649 #30 Fads3 (ENSDORG00000001648) #31 Fads2 (ENSDORG00000000340) #32 Fads1 (ENSDORG00000019737) #33 Fen1 (ENSDORG00000002039) #34 Tmem258 (ENSDORG00000002038) #35 Myrf (ENSDORG00000002029) #36 Dagla (ENSDORG00000002025) #37 Syt7 (ENSDORG00000006357) Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00530000063866.f.a ENSGT00390000013802.v.b ##26 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.b.p ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Sciuridae ANCESTRAL SPECIES 40 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00530000063866.f.a ENSGT00390000013802.v.b ##26 ENSGT00530000063866.f.b ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00950000182841.b.a.a.b.b.o.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 ENSGT00950000182990.a.a.b.b #33 Eurasian red squirrel MODERN SPECIES 2 BSCL2 (ENSSVLG00005005272) #8 GNG3 (ENSSVLG00005005306) #7 LRRN4CL (ENSSVLG00005005319) #9 UBXN1 (ENSSVLG00005005341) #10 UQCC3 (ENSSVLG00005005402) #11 CSKMT (ENSSVLG00005005417) ENSSVLG00005005456 #13 ENSSVLG00005005515 INTS5 (ENSSVLG00005005530) #15 GANAB (ENSSVLG00005005602) #16 B3GAT3 (ENSSVLG00005005875) #17 ROM1 (ENSSVLG00005005903) #18 EML3 (ENSSVLG00005005947) #19 MTA2 (ENSSVLG00005006257) #20 TUT1 (ENSSVLG00005006406) #21 EEF1G (ENSSVLG00005006436) #22 AHNAK (ENSSVLG00005006485) #23 SCGB1A1 (ENSSVLG00005006566) #24 ASRGL1 (ENSSVLG00005006616) #25 ENSSVLG00005006645 ENSSVLG00005006675 ENSSVLG00005006740 ##28 BEST1 (ENSSVLG00005006784) #29 RAB3IL1 (ENSSVLG00005006928) #30 FADS3 (ENSSVLG00005007116) #31 FADS2 (ENSSVLG00005007178) #32 FADS1 (ENSSVLG00005007252) #33 ENSSVLG00005007308 FEN1 (ENSSVLG00005007324) #34 TMEM258 (ENSSVLG00005007336) #35 MYRF (ENSSVLG00005007408) #36 Marmotini ANCESTRAL SPECIES 6 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00530000063866.f.a ENSGT00390000013802.v.b.a ##26 ENSGT00530000063866.f.b ENSGT00390000013802.v.b.b ##26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00950000182841.b.a.a.b.b.o.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 Marmotini_b ANCESTRAL SPECIES 21 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.b #23 ENSGT00940000154902.bb.a ##23 ENSGT00940000155073.b #24 ENSGT00950000183045.A.a.a #25 ENSGT00530000063866.f.a ENSGT00390000013802.v.b.a ##26 ENSGT00530000063866.f.b ENSGT00390000013802.v.b.b ##26 ENSGT00730000111073 #27 ENSGT00950000182841.b.a.a.b.a.a.b.a #28 ENSGT00950000182841.b.a.a.b.b.o.b ##28 ENSGT00940000158650 #29 ENSGT00940000159102 #30 ENSGT00950000182990.a.a.a.b.u.b #31 ENSGT00950000182990.a.a.a.b.u.a #32 Arctic ground squirrel MODERN SPECIES 366 HNRNPUL2 (ENSUPAG00010005211) GNG3 (ENSUPAG00010005209) #7 BSCL2 (ENSUPAG00010005172) #8 LRRN4CL (ENSUPAG00010005167) #9 UBXN1 (ENSUPAG00010005156) #10 UQCC3 (ENSUPAG00010005149) #11 CSKMT (ENSUPAG00010005145) C11orf98 (ENSUPAG00010005135) #13 INTS5 (ENSUPAG00010005127) #15 GANAB (ENSUPAG00010005106) #16 B3GAT3 (ENSUPAG00010005100) #17 ROM1 (ENSUPAG00010005099) #18 EML3 (ENSUPAG00010005056) #19 MTA2 (ENSUPAG00010005038) #20 TUT1 (ENSUPAG00010005020) #21 EEF1G (ENSUPAG00010005012) #22 ENSUPAG00010004999 #23 ENSUPAG00010004996 ENSUPAG00010004986 ##23 ASRGL1 (ENSUPAG00010004983) #25 ENSUPAG00010004973 ENSUPAG00010004955 ##26 ENSUPAG00010004946 ENSUPAG00010004941 ##26 INCENP (ENSUPAG00010004917) #27 ENSUPAG00010004905 #28 BEST1 (ENSUPAG00010004888) #29 ENSUPAG00010004814 #30 FADS2 (ENSUPAG00010004799) #32 FADS1 (ENSUPAG00010004789) #33 ENSUPAG00010004784 Squirrel DUPLICATION Squirrel MODERN SPECIES 181 TTC9C (ENSSTOG00000004352) HNRNPUL2 (ENSSTOG00000004327) GNG3 (ENSSTOG00000001052) #7 BSCL2 (ENSSTOG00000024362) #8 LRRN4CL (ENSSTOG00000022001) #9 UBXN1 (ENSSTOG00000004310) #10 UQCC3 (ENSSTOG00000029463) #11 C11orf98 (ENSSTOG00000025290) #13 INTS5 (ENSSTOG00000019630) #15 GANAB (ENSSTOG00000002934) #16 B3GAT3 (ENSSTOG00000002928) #17 ROM1 (ENSSTOG00000023639) #18 EML3 (ENSSTOG00000002908) #19 MTA2 (ENSSTOG00000002883) #20 TUT1 (ENSSTOG00000002859) #21 ENSSTOG00000002851 #22 ENSSTOG00000030073 ##23 SCGB1A1 (ENSSTOG00000010085) #24 ASRGL1 (ENSSTOG00000010064) #25 SCGB2A1 (ENSSTOG00000006184) ##26 ENSSTOG00000033144 INCENP (ENSSTOG00000014541) #27 ENSSTOG00000034070 ENSSTOG00000014521 ##28 BEST1 (ENSSTOG00000014508) #29 RAB3IL1 (ENSSTOG00000014496) #30 FADS3 (ENSSTOG00000019661) #31 FADS2 (ENSSTOG00000014489) #32 FADS1 (ENSSTOG00000003391) #33 FEN1 (ENSSTOG00000003387) #34 ENSSTOG00000031633 Squirrel MODERN SPECIES 128 NUCB2 (ENSSTOG00000001896) KCNJ11 (ENSSTOG00000025616) ABCC8 (ENSSTOG00000001904) USH1C (ENSSTOG00000001933) OTOG (ENSSTOG00000025595) MYOD1 (ENSSTOG00000011556) KCNC1 (ENSSTOG00000019519) SERGEF (ENSSTOG00000003395) TPH1 (ENSSTOG00000003404) ENSSTOG00000031021 SAAL1 (ENSSTOG00000003419) ENSSTOG00000022064 ENSSTOG00000000012 HPS5 (ENSSTOG00000000011) GTF2H1 (ENSSTOG00000000013) ENSSTOG00000033703 #22 ENSSTOG00000000014 LDHC (ENSSTOG00000032003) TSG101 (ENSSTOG00000024403) UEVLD (ENSSTOG00000009271) ENSSTOG00000032227 ENSSTOG00000032201 SPTY2D1 (ENSSTOG00000009291) TMEM86A (ENSSTOG00000001110) PTPN5 (ENSSTOG00000000962) ENSSTOG00000025927 ENSSTOG00000032362 ENSSTOG00000032916 ENSSTOG00000032510 ENSSTOG00000030069 ENSSTOG00000026033 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 3 TTC9C (ENSMMMG00000003362) HNRNPUL2 (ENSMMMG00000002784) GNG3 (ENSMMMG00000002755) #7 BSCL2 (ENSMMMG00000002687) #8 LRRN4CL (ENSMMMG00000002684) #9 UBXN1 (ENSMMMG00000002665) #10 UQCC3 (ENSMMMG00000002655) #11 CSKMT (ENSMMMG00000002643) INTS5 (ENSMMMG00000002623) #15 GANAB (ENSMMMG00000002585) #16 B3GAT3 (ENSMMMG00000002571) #17 ROM1 (ENSMMMG00000002567) #18 EML3 (ENSMMMG00000002484) #19 MTA2 (ENSMMMG00000002461) #20 TUT1 (ENSMMMG00000002433) #21 ENSMMMG00000002424 #22 ENSMMMG00000002408 #23 ENSMMMG00000002397 ##23 SCGB1A1 (ENSMMMG00000002393) #24 ASRGL1 (ENSMMMG00000002386) #25 ENSMMMG00000002372 ENSMMMG00000002360 ##26 ENSMMMG00000002256 ##28 BEST1 (ENSMMMG00000002191) #29 FADS3 (ENSMMMG00000002106) #31 FADS2 (ENSMMMG00000002075) #32 FADS1 (ENSMMMG00000002044) #33 ENSMMMG00000002036 FEN1 (ENSMMMG00000002027) #34 TMEM258 (ENSMMMG00000002020) #35 MYRF (ENSMMMG00000001773) #36 Alpin marmot MODERN SPECIES ENSMMMG00000007789 SLCO4C1 (ENSMMMG00000007769) ST8SIA4 (ENSMMMG00000007750) ENSMMMG00000007722 CHD1 (ENSMMMG00000007643) ENSMMMG00000007613 ENSMMMG00000007586 ENSMMMG00000007554 RIOK2 (ENSMMMG00000007539) LIX1 (ENSMMMG00000007525) LNPEP (ENSMMMG00000007455) ERAP2 (ENSMMMG00000006028) ERAP1 (ENSMMMG00000005931) CAST (ENSMMMG00000005793) PCSK1 (ENSMMMG00000005758) ENSMMMG00000005740 #22 ELL2 (ENSMMMG00000005714) ENSMMMG00000005706 GLRX (ENSMMMG00000005701) RHOBTB3 (ENSMMMG00000005684) ENSMMMG00000005662 SPATA9 (ENSMMMG00000005647) RFESD (ENSMMMG00000005634) ENSMMMG00000005629 ARSK (ENSMMMG00000005570) SKIC3 (ENSMMMG00000005439) FAM81B (ENSMMMG00000005408) MCTP1 (ENSMMMG00000005297) SLF1 (ENSMMMG00000005222) KIAA0825 (ENSMMMG00000005181) ENSMMMG00000005155 Hystricomorpha ANCESTRAL SPECIES 37 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000162696 #9 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00940000154902.bb.b #23 ENSGT00950000183045.A.a.a #25 ENSGT00530000063866.e ENSGT00940000161089 ENSGT00950000183151.a.a.a ENSGT00390000015415 ENSGT00950000183197.b.a ENSGT00390000018587 ENSGT00940000153899.a.a ENSGT00730000110905.a ENSGT00390000001149 ENSGT00390000003127 ENSGT00940000155040.a ENSGT00940000157180 Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000038212 HNRNPUL2 (ENSHGLG00000003285) GNG3 (ENSHGLG00000038630) #7 BSCL2 (ENSHGLG00000002887) #8 ENSHGLG00000038756 #9 UBXN1 (ENSHGLG00000002960) #10 METTL12 (ENSHGLG00000044833) ENSHGLG00000002601 #13 INTS5 (ENSHGLG00000039217) #15 ENSHGLG00000045807 #16 ENSHGLG00000045092 #16 B3GAT3 (ENSHGLG00000004546) #17 ROM1 (ENSHGLG00000003990) #18 MTA2 (ENSHGLG00000002877) #20 ENSHGLG00000037053 #21 EEF1G (ENSHGLG00000046941) #22 ENSHGLG00000034389 ##23 ENSHGLG00000037481 #23 ENSHGLG00000035437 ENSHGLG00000038948 #25 ENSHGLG00000029155 ENSHGLG00000046269 ENSHGLG00000033722 ENSHGLG00000002837 ENSHGLG00000046341 TKFC (ENSHGLG00000018883) CYB561A3 (ENSHGLG00000013997) ENSHGLG00000034372 ENSHGLG00000038968 ENSHGLG00000019090 ENSHGLG00000032097 Hystricomorpha_a ANCESTRAL SPECIES 44 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00950000183045.A.a.a #25 ENSGT00390000013802.u #26 ENSGT00940000161089 ENSGT00950000183151.a.a.a ENSGT00390000015415 ENSGT00950000183197.b.a ENSGT00390000018587 ENSGT00940000153899.a.a ENSGT00730000110905.a ENSGT00390000001149 ENSGT00390000003127 ENSGT00940000155040.a ENSGT00940000157180 ENSGT00940000161192 #37 Guinea pig MODERN SPECIES 44 ENSCPOG00000000739 GNG3 (ENSCPOG00000040497) #7 LRRN4CL (ENSCPOG00000036188) #9 BSCL2 (ENSCPOG00000021949) #8 UBXN1 (ENSCPOG00000004750) #10 UQCC3 (ENSCPOG00000035939) #11 CSKMT (ENSCPOG00000027504) C11orf98 (ENSCPOG00000039535) #13 INTS5 (ENSCPOG00000003669) #15 GANAB (ENSCPOG00000003659) #16 B3GAT3 (ENSCPOG00000021841) #17 ROM1 (ENSCPOG00000020227) #18 EML3 (ENSCPOG00000014293) #19 MTA2 (ENSCPOG00000014290) #20 TUT1 (ENSCPOG00000014281) #21 EEF1G (ENSCPOG00000025703) #22 ENSCPOG00000032311 ##23 ASRGL1 (ENSCPOG00000038025) #25 ENSCPOG00000030162 #26 Hystricomorpha_b ANCESTRAL SPECIES 80 ENSGT00940000161805 ENSGT00940000160376 ENSGT01100000263497.B #7 ENSGT00390000011639 #8 ENSGT00940000156457 #10 ENSGT00390000001930 #11 ENSGT00510000049875 ENSGT00390000002615 #13 ENSGT00390000008374 #15 ENSGT00940000159139 #16 ENSGT00940000156954 #17 ENSGT00940000159921 #18 ENSGT00940000159589 #19 ENSGT01030000234573.B.c.b.b #20 ENSGT00940000159914 #21 ENSGT00390000007552.f #22 ENSGT00940000154902.bb.a ##23 ENSGT00950000183045.A.a.a #25 ENSGT00940000161089 ENSGT00950000183151.a.a.a ENSGT00390000015415 ENSGT00950000183197.b.a ENSGT00390000018587 ENSGT00940000153899.a.a ENSGT00730000110905.a ENSGT00390000001149 ENSGT00390000003127 ENSGT00940000155040.a ENSGT00940000157180 ENSGT00940000161192 #37 ENSGT00530000063626.a #36 Long-tailed chinchilla MODERN SPECIES 306 HNRNPUL2 (ENSCLAG00000000417) LRRN4CL (ENSCLAG00000000228) #9 GNG3 (ENSCLAG00000000268) #7 BSCL2 (ENSCLAG00000000105) #8 UQCC3 (ENSCLAG00000000136) #11 UBXN1 (ENSCLAG00000000144) #10 CSKMT (ENSCLAG00000000298) C11orf98 (ENSCLAG00000000342) #13 INTS5 (ENSCLAG00000000384) #15 GANAB (ENSCLAG00000000345) #16 B3GAT3 (ENSCLAG00000001628) #17 ROM1 (ENSCLAG00000000479) #18 EML3 (ENSCLAG00000001662) #19 MTA2 (ENSCLAG00000000128) #20 TUT1 (ENSCLAG00000000215) #21 EEF1G (ENSCLAG00000000315) #22 ENSCLAG00000000347 ##23 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 238 CADM4 (ENSODEG00000010861) PLAUR (ENSODEG00000010245) ENSODEG00000019696 IRGC (ENSODEG00000009791) SMG9 (ENSODEG00000010484) KCNN4 (ENSODEG00000008740) LYPD5 (ENSODEG00000008374) ENSODEG00000019532 ZNF45 (ENSODEG00000011301) ZNF227 (ENSODEG00000008802) ENSODEG00000008591 ENSODEG00000010507 ZNF235 (ENSODEG00000008851) ZNF112 (ENSODEG00000009193) ZNF180 (ENSODEG00000010071) ENSODEG00000019539 #22 CEACAM19 (ENSODEG00000008206) CEACAM16 (ENSODEG00000008673) BCL3 (ENSODEG00000009380) CBLC (ENSODEG00000008402) BCAM (ENSODEG00000013187) NECTIN2 (ENSODEG00000008200) ENSODEG00000010615 APOE (ENSODEG00000008747) ENSODEG00000010383 ENSODEG00000011088 APOC2 (ENSODEG00000008478) CLPTM1 (ENSODEG00000008066) RELB (ENSODEG00000008207) CLASRP (ENSODEG00000008407) ZNF296 (ENSODEG00000008238) Degu MODERN SPECIES 320 TAF6L (ENSODEG00000001781) ENSODEG00000018748 ENSODEG00000002048 HNRNPUL2 (ENSODEG00000002142) TTC9C (ENSODEG00000002308) GNG3 (ENSODEG00000002315) #7 UBXN1 (ENSODEG00000002987) #10 UQCC3 (ENSODEG00000003020) #11 INTS5 (ENSODEG00000003038) #15 GANAB (ENSODEG00000003210) #16 B3GAT3 (ENSODEG00000003388) #17 ROM1 (ENSODEG00000003428) #18 EML3 (ENSODEG00000003455) #19 MTA2 (ENSODEG00000003595) #20 TUT1 (ENSODEG00000002204) #21 ENSODEG00000002254 #22 ENSODEG00000002275 ##23 ENSODEG00000002297 ENSODEG00000002313 #25 ENSODEG00000002333 #25 VWCE (ENSODEG00000002356) DDB1 (ENSODEG00000002419) CYB561A3 (ENSODEG00000002516) TKFC (ENSODEG00000002529) TMEM138 (ENSODEG00000002548) TMEM216 (ENSODEG00000002567) CPSF7 (ENSODEG00000002610) SDHAF2 (ENSODEG00000002638) PPP1R32 (ENSODEG00000004127) SYT7 (ENSODEG00000004157) DAGLA (ENSODEG00000004222) #37 Degu MODERN SPECIES 77 ENSODEG00000007521 ADAM7 (ENSODEG00000007547) ADAMDEC1 (ENSODEG00000008034) ADAM28 (ENSODEG00000007875) STC1 (ENSODEG00000007382) NKX2-6 (ENSODEG00000007413) NKX3-1 (ENSODEG00000007004) SLC25A37 (ENSODEG00000007363) ENTPD4 (ENSODEG00000009788) ENSODEG00000009404 LOXL2 (ENSODEG00000006938) R3HCC1 (ENSODEG00000007529) ENSODEG00000019474 ENSODEG00000007294 RHOBTB2 (ENSODEG00000007111) ENSODEG00000008725 #22 EGR3 (ENSODEG00000007442) BIN3 (ENSODEG00000006965) CCAR2 (ENSODEG00000008466) C8orf58 (ENSODEG00000006637) PDLIM2 (ENSODEG00000006028) SORBS3 (ENSODEG00000007179) PPP3CC (ENSODEG00000006004) SLC39A14 (ENSODEG00000006438) ENSODEG00000019353 PIWIL2 (ENSODEG00000009752) POLR3D (ENSODEG00000005884) PHYHIP (ENSODEG00000006421) BMP1 (ENSODEG00000007288) SFTPC (ENSODEG00000007026) LGI3 (ENSODEG00000006726)