Vertebrata ANCESTRAL SPECIES ENSGT00940000153593 #22 Gnathostomata ANCESTRAL SPECIES 1444 ENSGT00530000064192 #21 ENSGT00940000153593 #22 Euteleostomi ANCESTRAL SPECIES 1124 ENSGT00530000064192 #21 ENSGT00940000153593 #22 Sarcopterygii ANCESTRAL SPECIES 398 ENSGT00530000064192 #21 ENSGT00940000153593 #22 ENSGT00940000166035 ENSGT00940000156569.b ##25 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 Tetrapoda ANCESTRAL SPECIES 122 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00940000165458 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593 #22 ENSGT00940000166035 ENSGT00940000156569.a.a ##25 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 Amniota DUPLICATION Amniota DUPLICATION Amniota ANCESTRAL SPECIES 23 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000157413 #30 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 ENSGT00390000000672.a.a #37 Mammalia ANCESTRAL SPECIES 39 ENSGT00940000174538 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Theria ANCESTRAL SPECIES 31 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Eutheria ANCESTRAL SPECIES 24 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Boreoeutheria ANCESTRAL SPECIES 18 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Laurasiatheria ANCESTRAL SPECIES 15 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Laurasiatheria_a ANCESTRAL SPECIES 19 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Laurasiatheria_b ANCESTRAL SPECIES 18 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Carnivora ANCESTRAL SPECIES 6 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Felidae ANCESTRAL SPECIES 17 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Cat MODERN SPECIES 1 MPV17L2 (ENSFCAG00000002478) #7 RAB3A (ENSFCAG00000002479) #8 PDE4C (ENSFCAG00000007525) #9 ENSFCAG00000047561 #10 IQCN (ENSFCAG00000007527) #11 JUND (ENSFCAG00000043242) #12 LSM4 (ENSFCAG00000040580) #13 PGPEP1 (ENSFCAG00000045024) #14 GDF15 (ENSFCAG00000009733) #15 LRRC25 (ENSFCAG00000009734) #16 SSBP4 (ENSFCAG00000009736) #17 ISYNA1 (ENSFCAG00000009738) #18 ELL (ENSFCAG00000009739) #19 FKBP8 (ENSFCAG00000009741) #20 KXD1 (ENSFCAG00000033273) #21 UBA52 (ENSFCAG00000009745) #22 REX1BD (ENSFCAG00000024240) #23 ENSFCAG00000033106 #24 CRLF1 (ENSFCAG00000009747) #25 TMEM59L (ENSFCAG00000009749) #26 KLHL26 (ENSFCAG00000042696) #27 CRTC1 (ENSFCAG00000009752) #28 COMP (ENSFCAG00000009754) #29 UPF1 (ENSFCAG00000009757) #30 CERS1 (ENSFCAG00000023920) #31 DDX49 (ENSFCAG00000009760) #32 HOMER3 (ENSFCAG00000009762) #33 SUGP2 (ENSFCAG00000009765) #34 ARMC6 (ENSFCAG00000009767) #35 SLC25A42 (ENSFCAG00000009770) #36 TMEM161A (ENSFCAG00000009771) #37 Panthera ANCESTRAL SPECIES 1 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Tiger MODERN SPECIES 281 ENSPTIG00000021064 MAST3 (ENSPTIG00000021248) ENSPTIG00000002114 IFI30 (ENSPTIG00000003466) MPV17L2 (ENSPTIG00000003892) #7 RAB3A (ENSPTIG00000004193) #8 PDE4C (ENSPTIG00000005389) #9 LSM4 (ENSPTIG00000006306) #13 PGPEP1 (ENSPTIG00000006509) #14 LRRC25 (ENSPTIG00000006894) #16 SSBP4 (ENSPTIG00000007035) #17 ISYNA1 (ENSPTIG00000007457) #18 ELL (ENSPTIG00000007637) #19 FKBP8 (ENSPTIG00000008090) #20 KXD1 (ENSPTIG00000008232) #21 UBA52 (ENSPTIG00000008713) #22 ENSPTIG00000008919 #23 CRLF1 (ENSPTIG00000009041) #25 TMEM59L (ENSPTIG00000009187) #26 ENSPTIG00000009230 #27 ENSPTIG00000009351 #27 CRTC1 (ENSPTIG00000009427) #28 ENSPTIG00000010043 #29 UPF1 (ENSPTIG00000010159) #30 GDF1 (ENSPTIG00000010670) CERS1 (ENSPTIG00000010849) COPE (ENSPTIG00000010957) #31 DDX49 (ENSPTIG00000011259) #32 HOMER3 (ENSPTIG00000011533) #33 SUGP2 (ENSPTIG00000012003) #34 ARMC6 (ENSPTIG00000012073) #35 Panthera_a ANCESTRAL SPECIES ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 lion MODERN SPECIES 2 IFI30 (ENSPLOG00000004199) MPV17L2 (ENSPLOG00000000018) #7 RAB3A (ENSPLOG00000000031) #8 PDE4C (ENSPLOG00000000047) #9 ENSPLOG00000000074 #11 JUND (ENSPLOG00000000080) #12 LSM4 (ENSPLOG00000000089) #13 PGPEP1 (ENSPLOG00000000108) #14 GDF15 (ENSPLOG00000000128) #15 LRRC25 (ENSPLOG00000000140) #16 SSBP4 (ENSPLOG00000000155) #17 ISYNA1 (ENSPLOG00000000180) #18 ELL (ENSPLOG00000000208) #19 FKBP8 (ENSPLOG00000000234) #20 KXD1 (ENSPLOG00000000255) #21 UBA52 (ENSPLOG00000000273) #22 REX1BD (ENSPLOG00000000289) #23 ENSPLOG00000000303 #24 CRLF1 (ENSPLOG00000000319) #25 TMEM59L (ENSPLOG00000000339) #26 KLHL26 (ENSPLOG00000000360) #27 CRTC1 (ENSPLOG00000000409) #28 COMP (ENSPLOG00000000492) #29 UPF1 (ENSPLOG00000000562) #30 GDF1 (ENSPLOG00000000580) CERS1 (ENSPLOG00000000599) COPE (ENSPLOG00000000628) #31 DDX49 (ENSPLOG00000000667) #32 HOMER3 (ENSPLOG00000000722) #33 SUGP2 (ENSPLOG00000000772) #34 ARMC6 (ENSPLOG00000000792) #35 leopard MODERN SPECIES 68 IFI30 (ENSPPRG00000005435) MPV17L2 (ENSPPRG00000005164) #7 RAB3A (ENSPPRG00000004866) #8 PDE4C (ENSPPRG00000004111) #9 JUND (ENSPPRG00000017555) #12 LSM4 (ENSPPRG00000018264) #13 PGPEP1 (ENSPPRG00000016192) #14 GDF15 (ENSPPRG00000013391) #15 LRRC25 (ENSPPRG00000013320) #16 SSBP4 (ENSPPRG00000012939) #17 ISYNA1 (ENSPPRG00000011081) #18 ELL (ENSPPRG00000009009) #19 ENSPPRG00000008580 #19 FKBP8 (ENSPPRG00000008402) #20 KXD1 (ENSPPRG00000007892) #21 UBA52 (ENSPPRG00000006788) #22 REX1BD (ENSPPRG00000004571) #23 CRLF1 (ENSPPRG00000004235) #25 TMEM59L (ENSPPRG00000003959) #26 KLHL26 (ENSPPRG00000003359) #27 CRTC1 (ENSPPRG00000001977) #28 COMP (ENSPPRG00000000723) #29 UPF1 (ENSPPRG00000023470) #30 GDF1 (ENSPPRG00000024438) CERS1 (ENSPPRG00000021419) COPE (ENSPPRG00000019668) #31 DDX49 (ENSPPRG00000013274) #32 HOMER3 (ENSPPRG00000013004) #33 SUGP2 (ENSPPRG00000010924) #34 ARMC6 (ENSPPRG00000009582) #35 SLC25A42 (ENSPPRG00000008936) #36 Caniformia ANCESTRAL SPECIES 4 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Canidae ANCESTRAL SPECIES ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478.b #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Red fox MODERN SPECIES 5 PIK3R2 (ENSVVUG00000008441) IFI30 (ENSVVUG00000008281) MPV17L2 (ENSVVUG00000008270) #7 RAB3A (ENSVVUG00000008188) #8 PDE4C (ENSVVUG00000008178) #9 ENSVVUG00000008151 #11 LSM4 (ENSVVUG00000008136) #13 PGPEP1 (ENSVVUG00000008129) #14 GDF15 (ENSVVUG00000008127) #15 LRRC25 (ENSVVUG00000008124) #16 ENSVVUG00000008114 SSBP4 (ENSVVUG00000008060) #17 ISYNA1 (ENSVVUG00000008037) #18 ELL (ENSVVUG00000008025) #19 FKBP8 (ENSVVUG00000008005) #20 UBA52 (ENSVVUG00000007989) #22 REX1BD (ENSVVUG00000007980) #23 CRLF1 (ENSVVUG00000007976) #25 TMEM59L (ENSVVUG00000007974) #26 KLHL26 (ENSVVUG00000007964) #27 CRTC1 (ENSVVUG00000007833) #28 ENSVVUG00000007818 #29 UPF1 (ENSVVUG00000007797) #30 CERS1 (ENSVVUG00000007783) ENSVVUG00000007777 #31 DDX49 (ENSVVUG00000007767) #32 HOMER3 (ENSVVUG00000007758) #33 SUGP2 (ENSVVUG00000007744) #34 ARMC6 (ENSVVUG00000007731) #35 SLC25A42 (ENSVVUG00000007728) #36 TMEM161A (ENSVVUG00000007683) #37 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00950000183087.A.b.a.a ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478.b #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Dingo MODERN SPECIES 313 C6 (ENSCAFG00020011760) MROH2B (ENSCAFG00020012118) C7 (ENSCAFG00020012179) CARD6 (ENSCAFG00020012185) ENSCAFG00020012191 ENSCAFG00020012194 PRKAA1 (ENSCAFG00020012199) TTC33 (ENSCAFG00020012202) PTGER4 (ENSCAFG00020012207) ENSCAFG00020012213 DAB2 (ENSCAFG00020012220) C9 (ENSCAFG00020012230) FYB1 (ENSCAFG00020012241) RICTOR (ENSCAFG00020012256) OSMR (ENSCAFG00020012366) ENSCAFG00020012396 #22 LIFR (ENSCAFG00020012405) EGFLAM (ENSCAFG00020012614) ENSCAFG00020012665 GDNF (ENSCAFG00020012672) WDR70 (ENSCAFG00020012697) NUP155 (ENSCAFG00020013105) CPLANE1 (ENSCAFG00020014796) NIPBL (ENSCAFG00020014920) ENSCAFG00020016583 ENSCAFG00020016588 RANBP3L (ENSCAFG00020016590) NADK2 (ENSCAFG00020016603) SKP2 (ENSCAFG00020016656) LMBRD2 (ENSCAFG00020016658) ENSCAFG00020016659 Dog MODERN SPECIES 12 IFI30 (ENSCAFG00845023402) MPV17L2 (ENSCAFG00845023290) #7 RAB3A (ENSCAFG00845023221) #8 PDE4C (ENSCAFG00845022978) #9 ENSCAFG00845022825 #11 JUND (ENSCAFG00845022784) #12 LSM4 (ENSCAFG00845022544) #13 PGPEP1 (ENSCAFG00845022461) #14 ENSCAFG00845022439 GDF15 (ENSCAFG00845022411) #15 LRRC25 (ENSCAFG00845022385) #16 SSBP4 (ENSCAFG00845021896) #17 ISYNA1 (ENSCAFG00845021270) #19 FKBP8 (ENSCAFG00845021109) #20 KXD1 (ENSCAFG00845021012) #21 UBA52 (ENSCAFG00845020932) #22 ENSCAFG00845020838 #23 CRLF1 (ENSCAFG00845020775) #25 KLHL26 (ENSCAFG00845020669) #27 CRTC1 (ENSCAFG00845020362) #28 ENSCAFG00845020236 #26 COMP (ENSCAFG00845020025) #29 UPF1 (ENSCAFG00845019866) #30 GDF1 (ENSCAFG00845019828) CERS1 (ENSCAFG00845019662) COPE (ENSCAFG00845019400) #31 DDX49 (ENSCAFG00845019266) #32 HOMER3 (ENSCAFG00845019115) #33 SUGP2 (ENSCAFG00845018888) #34 ARMC6 (ENSCAFG00845018765) #35 SLC25A42 (ENSCAFG00845018653) #36 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395.j #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Mustelinae ANCESTRAL SPECIES 10 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395.j #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 American mink MODERN SPECIES 58 IFI30 (ENSNVIG00000017558) MPV17L2 (ENSNVIG00000017572) #7 RAB3A (ENSNVIG00000017588) #8 PDE4C (ENSNVIG00000017617) #9 ENSNVIG00000017808 #11 JUND (ENSNVIG00000017813) #12 LSM4 (ENSNVIG00000017819) #13 PGPI (ENSNVIG00000017857) #14 GDF15 (ENSNVIG00000017900) #15 LRRC25 (ENSNVIG00000017909) #16 SSBP4 (ENSNVIG00000017915) #17 ISYNA1 (ENSNVIG00000017993) #18 ELL (ENSNVIG00000018054) #19 FKBP8 (ENSNVIG00000018099) #20 KXD1 (ENSNVIG00000018138) #21 UBA52 (ENSNVIG00000018210) #22 REX1BD (ENSNVIG00000018234) #23 CRLF1 (ENSNVIG00000018244) #25 TMEM59L (ENSNVIG00000018259) #26 KLHL26 (ENSNVIG00000018276) #27 CRTC1 (ENSNVIG00000018294) #28 COMP (ENSNVIG00000018415) #29 UPF1 (ENSNVIG00000019863) #30 GDF1 (ENSNVIG00000019930) CERS1 (ENSNVIG00000019939) COPE (ENSNVIG00000019958) #31 DDX49 (ENSNVIG00000020003) #32 HOMER3 (ENSNVIG00000020032) #33 SUGP2 (ENSNVIG00000020116) #34 ARMC6 (ENSNVIG00000020143) #35 S2542 (ENSNVIG00000020166) #36 Ursidae ANCESTRAL SPECIES 11 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395.j #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Ursus ANCESTRAL SPECIES 5 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395.j #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Polar bear MODERN SPECIES 255 MAST3 (ENSUMAG00000009640) PIK3R2 (ENSUMAG00000009514) IFI30 (ENSUMAG00000009491) MPV17L2 (ENSUMAG00000009485) #7 RAB3A (ENSUMAG00000009464) #8 PDE4C (ENSUMAG00000009070) #9 ENSUMAG00000009018 #11 LSM4 (ENSUMAG00000009013) #13 PGPEP1 (ENSUMAG00000009009) #14 GDF15 (ENSUMAG00000009006) #15 LRRC25 (ENSUMAG00000009005) #16 ENSUMAG00000009000 #17 ELL (ENSUMAG00000008994) #19 FKBP8 (ENSUMAG00000008964) #20 KXD1 (ENSUMAG00000008955) #21 UBA52 (ENSUMAG00000008953) #22 ENSUMAG00000008945 #23 ENSUMAG00000008937 CRTC1 (ENSUMAG00000008860) #28 COMP (ENSUMAG00000007436) #29 UPF1 (ENSUMAG00000006652) #30 COPE (ENSUMAG00000006505) #31 DDX49 (ENSUMAG00000006489) #32 HOMER3 (ENSUMAG00000006477) #33 SUGP2 (ENSUMAG00000006467) #34 ARMC6 (ENSUMAG00000006462) #35 SLC25A42 (ENSUMAG00000006458) #36 TMEM161A (ENSUMAG00000006455) #37 MEF2B (ENSUMAG00000006437) BORCS8 (ENSUMAG00000006425) RFXANK (ENSUMAG00000006419) Giant Panda DUPLICATION Giant Panda MODERN SPECIES 928 ENSAMEG00000029441 #22 ENSAMEG00000031062 #22 Giant Panda MODERN SPECIES 928 ENSAMEG00000029441 #22 ENSAMEG00000031062 #22 Giant Panda MODERN SPECIES 1154 ENSAMEG00000026263 #22 Giant Panda MODERN SPECIES 14 IFI30 (ENSAMEG00000011068) ENSAMEG00000011081 #7 RAB3A (ENSAMEG00000011085) #8 PDE4C (ENSAMEG00000011097) #9 ENSAMEG00000025141 #11 JUND (ENSAMEG00000025896) #12 ENSAMEG00000011162 PGPEP1 (ENSAMEG00000027815) #14 GDF15 (ENSAMEG00000011178) #15 LRRC25 (ENSAMEG00000011181) #16 SSBP4 (ENSAMEG00000011185) #17 ISYNA1 (ENSAMEG00000011239) #18 ELL (ENSAMEG00000011276) #19 ENSAMEG00000011325 #20 ENSAMEG00000011348 #21 UBA52 (ENSAMEG00000011356) #22 REX1BD (ENSAMEG00000011371) #23 CRLF1 (ENSAMEG00000011375) #25 TMEM59L (ENSAMEG00000011379) #26 KLHL26 (ENSAMEG00000011385) #27 CRTC1 (ENSAMEG00000011390) #28 COMP (ENSAMEG00000011419) #29 UPF1 (ENSAMEG00000011474) #30 CERS1 (ENSAMEG00000011517) COPE (ENSAMEG00000011524) #31 DDX49 (ENSAMEG00000011566) #32 HOMER3 (ENSAMEG00000011595) #33 SUGP2 (ENSAMEG00000011613) #34 ARMC6 (ENSAMEG00000011621) #35 SLC25A42 (ENSAMEG00000027218) #36 TMEM161A (ENSAMEG00000011655) #37 Laurasiatheria_c ANCESTRAL SPECIES 16 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Equus ANCESTRAL SPECIES 23 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Donkey MODERN SPECIES RAB3A (ENSEASG00005006221) #8 PDE4C (ENSEASG00005006231) #9 ENSEASG00005028857 #10 ENSEASG00005038750 ENSEASG00005006233 #11 JUND (ENSEASG00005006235) #12 ENSEASG00005030773 #13 PGPEP1 (ENSEASG00005006237) #14 ENSEASG00005032985 LRRC25 (ENSEASG00005006241) #16 SSBP4 (ENSEASG00005006244) #17 ISYNA1 (ENSEASG00005006248) #18 ELL (ENSEASG00005006252) #19 FKBP8 (ENSEASG00005006254) #20 KXD1 (ENSEASG00005031599) #21 UBA52 (ENSEASG00005033556) #22 ENSEASG00005025213 #23 CRLF1 (ENSEASG00005006270) #25 TMEM59L (ENSEASG00005006274) #26 KLHL26 (ENSEASG00005006276) #27 CRTC1 (ENSEASG00005006280) #28 COMP (ENSEASG00005006320) #29 UPF1 (ENSEASG00005006549) #30 GDF1 (ENSEASG00005029430) CERS1 (ENSEASG00005030456) COPE (ENSEASG00005006557) #31 DDX49 (ENSEASG00005006560) #32 HOMER3 (ENSEASG00005006562) #33 SUGP2 (ENSEASG00005006565) #34 ARMC6 (ENSEASG00005006568) #35 SLC25A42 (ENSEASG00005006570) #36 Chiroptera ANCESTRAL SPECIES 44 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Megabat MODERN SPECIES 485 GDF15 (ENSPVAG00000009921) #15 SSBP4 (ENSPVAG00000009922) #17 ISYNA1 (ENSPVAG00000009923) #18 ELL (ENSPVAG00000009924) #19 FKBP8 (ENSPVAG00000009926) #20 KXD1 (ENSPVAG00000009927) #21 UBA52 (ENSPVAG00000024217) #22 ENSPVAG00000009928 #23 CRLF1 (ENSPVAG00000009929) #25 TMEM59L (ENSPVAG00000009930) #26 KLHL26 (ENSPVAG00000009931) #27 Microchiroptera ANCESTRAL SPECIES 43 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Microbat DUPLICATION Microbat MODERN SPECIES 1005 NADK2 (ENSMLUG00000002689) RANBP3L (ENSMLUG00000002697) NIPBL (ENSMLUG00000001724) ENSMLUG00000011746 ENSMLUG00000029621 NUP155 (ENSMLUG00000014272) WDR70 (ENSMLUG00000004998) GDNF (ENSMLUG00000005002) EGFLAM (ENSMLUG00000012866) LIFR (ENSMLUG00000015027) OSMR (ENSMLUG00000005743) RICTOR (ENSMLUG00000005754) FYB1 (ENSMLUG00000002937) C9 (ENSMLUG00000005440) DAB2 (ENSMLUG00000005444) ENSMLUG00000027508 #22 ENSMLUG00000006820 ENSMLUG00000030031 ENSMLUG00000029265 PTGER4 (ENSMLUG00000010038) TTC33 (ENSMLUG00000012023) PRKAA1 (ENSMLUG00000014242) RPL37 (ENSMLUG00000001565) ENSMLUG00000007572 C7 (ENSMLUG00000007586) MROH2B (ENSMLUG00000007613) C6 (ENSMLUG00000016910) PLCXD3 (ENSMLUG00000016916) ENSMLUG00000009431 RIMOC1 (ENSMLUG00000007915) FBXO4 (ENSMLUG00000014799) Microbat MODERN SPECIES 1248 IFI30 (ENSMLUG00000000931) MPV17L2 (ENSMLUG00000024457) #7 PDE4C (ENSMLUG00000003985) #9 ENSMLUG00000003998 #11 LSM4 (ENSMLUG00000004010) #13 PGPEP1 (ENSMLUG00000002092) #14 ENSMLUG00000023172 GDF15 (ENSMLUG00000002100) #15 LRRC25 (ENSMLUG00000002102) #16 SSBP4 (ENSMLUG00000002107) #17 ISYNA1 (ENSMLUG00000002119) #18 ENSMLUG00000002123 #19 ENSMLUG00000023645 #19 FKBP8 (ENSMLUG00000002128) #20 KXD1 (ENSMLUG00000002143) #21 ENSMLUG00000029594 #22 REX1BD (ENSMLUG00000030218) #23 CRLF1 (ENSMLUG00000002437) #25 ENSMLUG00000028871 KLHL26 (ENSMLUG00000003470) #27 CRTC1 (ENSMLUG00000012234) #28 COMP (ENSMLUG00000012249) #29 UPF1 (ENSMLUG00000012122) #30 ENSMLUG00000012140 ENSMLUG00000026905 COPE (ENSMLUG00000012147) #31 DDX49 (ENSMLUG00000012159) #32 HOMER3 (ENSMLUG00000012170) #33 ENSMLUG00000025755 SUGP2 (ENSMLUG00000012189) #34 ENSMLUG00000012203 #35 Artiodactyla ANCESTRAL SPECIES 22 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Artiodactyla_a ANCESTRAL SPECIES 23 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Camelidae ANCESTRAL SPECIES 64 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192.q #21 ENSGT00940000153593.c.a #22 ENSGT00530000064192.r #21 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Arabian camel MODERN SPECIES 14 IFI30 (ENSCDRG00005011860) MPV17L2 (ENSCDRG00005011813) #7 RAB3A (ENSCDRG00005011718) #8 PDE4C (ENSCDRG00005011492) #9 ENSCDRG00005011454 #10 ENSCDRG00005011380 #11 LSM4 (ENSCDRG00005011254) #13 PGPEP1 (ENSCDRG00005011120) #14 GDF15 (ENSCDRG00005011075) #15 LRRC25 (ENSCDRG00005011039) #16 ISYNA1 (ENSCDRG00005010835) #18 SSBP4 (ENSCDRG00005010596) #17 ELL (ENSCDRG00005010516) #19 FKBP8 (ENSCDRG00005010447) #20 ENSCDRG00005010351 #21 UBA52 (ENSCDRG00005010272) #22 REX1BD (ENSCDRG00005010167) #23 CRLF1 (ENSCDRG00005010053) #25 TMEM59L (ENSCDRG00005009996) #26 KLHL26 (ENSCDRG00005009944) #27 CRTC1 (ENSCDRG00005009334) #28 COMP (ENSCDRG00005009080) #29 UPF1 (ENSCDRG00005008931) #30 CERS1 (ENSCDRG00005013600) COPE (ENSCDRG00005013441) #31 DDX49 (ENSCDRG00005013373) #32 HOMER3 (ENSCDRG00005013258) #33 SUGP2 (ENSCDRG00005013031) #34 ARMC6 (ENSCDRG00005012979) #35 SLC25A42 (ENSCDRG00005012927) #36 TMEM161A (ENSCDRG00005012779) #37 Artiodactyla_b ANCESTRAL SPECIES 23 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Blue whale MODERN SPECIES 14 RAB3A (ENSBMSG00010004711) #8 PDE4C (ENSBMSG00010004659) #9 ENSBMSG00010004630 #10 ENSBMSG00010004618 #11 JUND (ENSBMSG00010004609) #12 LSM4 (ENSBMSG00010004583) #13 PGPEP1 (ENSBMSG00010004554) #14 ENSBMSG00010004531 GDF15 (ENSBMSG00010004519) #15 LRRC25 (ENSBMSG00010004508) #16 SSBP4 (ENSBMSG00010004477) #17 ISYNA1 (ENSBMSG00010004428) #18 ELL (ENSBMSG00010004392) #19 FKBP8 (ENSBMSG00010004359) #20 KXD1 (ENSBMSG00010004344) #21 UBA52 (ENSBMSG00010004333) #22 REX1BD (ENSBMSG00010004317) #23 CRLF1 (ENSBMSG00010004297) #25 TMEM59L (ENSBMSG00010004290) #26 KLHL26 (ENSBMSG00010004285) #27 CRTC1 (ENSBMSG00010004257) #28 COMP (ENSBMSG00010004199) #29 UPF1 (ENSBMSG00010004141) #30 GDF1 (ENSBMSG00010004120) CERS1 (ENSBMSG00010004105) COPE (ENSBMSG00010004064) #31 DDX49 (ENSBMSG00010004039) #32 HOMER3 (ENSBMSG00010003958) #33 SUGP2 (ENSBMSG00010003931) #34 ARMC6 (ENSBMSG00010003914) #35 SLC25A42 (ENSBMSG00010003900) #36 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173.a.a #13 ENSGT00610000086173.b #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Sperm whale MODERN SPECIES 379 KXD1 (ENSPCTG00005009741) #21 UBA52 (ENSPCTG00005009698) #22 REX1BD (ENSPCTG00005009583) #23 CRLF1 (ENSPCTG00005009544) #25 TMEM59L (ENSPCTG00005009441) #26 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173.a.a #13 ENSGT00610000086173.b #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173.b #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b ##22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000153593.c.a #22 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 ENSGT00390000000672.a.a #37 Vaquita MODERN SPECIES 14 RAB3A (ENSPSNG00000003382) #8 PDE4C (ENSPSNG00000003220) #9 ENSPSNG00000003167 #11 JUND (ENSPSNG00000003153) #12 ENSPSNG00000003131 #13 PGPEP1 (ENSPSNG00000003067) #14 GDF15 (ENSPSNG00000003041) #15 LRRC25 (ENSPSNG00000003029) #16 SSBP4 (ENSPSNG00000002994) #17 ISYNA1 (ENSPSNG00000002918) #18 ELL (ENSPSNG00000002839) #19 FKBP8 (ENSPSNG00000002784) #20 KXD1 (ENSPSNG00000002749) #21 ENSPSNG00000002729 #24 REX1BD (ENSPSNG00000002705) #23 UBA52 (ENSPSNG00000002675) #22 CRLF1 (ENSPSNG00000002653) #25 TMEM59L (ENSPSNG00000002614) #26 KLHL26 (ENSPSNG00000002575) #27 CRTC1 (ENSPSNG00000002462) #28 COMP (ENSPSNG00000002298) #29 UPF1 (ENSPSNG00000002213) #30 GDF1 (ENSPSNG00000002175) CERS1 (ENSPSNG00000002156) COPE (ENSPSNG00000002124) #31 DDX49 (ENSPSNG00000002062) #32 HOMER3 (ENSPSNG00000002016) #33 SUGP2 (ENSPSNG00000001966) #34 ARMC6 (ENSPSNG00000001939) #35 SLC25A42 (ENSPSNG00000001921) #36 TMEM161A (ENSPSNG00000001898) #37 Dolphin MODERN SPECIES 3273 ELL (ENSTTRG00000010436) #19 FKBP8 (ENSTTRG00000010470) #20 KXD1 (ENSTTRG00000010477) #21 UBA52 (ENSTTRG00000021461) #22 ENSTTRG00000010481 #23 CRLF1 (ENSTTRG00000010484) #25 TMEM59L (ENSTTRG00000010492) #26 KLHL26 (ENSTTRG00000010497) #27 CRTC1 (ENSTTRG00000010501) #28 COMP (ENSTTRG00000010509) #29 Pecora ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Yarkand deer MODERN SPECIES 32 IFI30 (ENSCHYG00000019975) MPV17L2 (ENSCHYG00000019897) #7 RAB3A (ENSCHYG00000019752) #8 PDE4C (ENSCHYG00000019445) #9 ENSCHYG00000019351 #10 JUND (ENSCHYG00000019284) #12 LSM4 (ENSCHYG00000019053) #13 PGPEP1 (ENSCHYG00000018924) #14 GDF15 (ENSCHYG00000018886) #15 LRRC25 (ENSCHYG00000018842) #16 SSBP4 (ENSCHYG00000018441) #17 ISYNA1 (ENSCHYG00000018077) #18 ELL (ENSCHYG00000017915) #19 FKBP8 (ENSCHYG00000017721) #20 KXD1 (ENSCHYG00000017621) #21 UBA52 (ENSCHYG00000017560) #22 REX1BD (ENSCHYG00000017438) #23 CRLF1 (ENSCHYG00000017284) #25 TMEM59L (ENSCHYG00000017122) #26 KLHL26 (ENSCHYG00000017020) #27 CRTC1 (ENSCHYG00000016471) #28 COMP (ENSCHYG00000016040) #29 UPF1 (ENSCHYG00000015773) #30 GDF1 (ENSCHYG00000015658) CERS1 (ENSCHYG00000015529) DDX49 (ENSCHYG00000015448) #32 ENSCHYG00000014561 #33 SUGP2 (ENSCHYG00000014360) #34 ARMC6 (ENSCHYG00000014214) #35 SLC25A42 (ENSCHYG00000014137) #36 TMEM161A (ENSCHYG00000013806) #37 Percora_a ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Bovidae ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.q.b #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Caprinae ANCESTRAL SPECIES 32 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.q.b #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Rambouillet Sheep MODERN SPECIES 21 IFI30 (ENSOARG00020005418) MPV17L2 (ENSOARG00020005392) #7 RAB3A (ENSOARG00020005307) #8 PDE4C (ENSOARG00020004959) #9 ENSOARG00020004884 #11 JUND (ENSOARG00020004870) #12 LSM4 (ENSOARG00020004808) #13 PGPEP1 (ENSOARG00020004669) #14 GDF15 (ENSOARG00020004638) #15 LRRC25 (ENSOARG00020004617) #16 SSBP4 (ENSOARG00020004580) #17 ISYNA1 (ENSOARG00020004475) #18 ELL (ENSOARG00020004406) #19 FKBP8 (ENSOARG00020004369) #20 KXD1 (ENSOARG00020004349) #21 UBA52 (ENSOARG00020004308) #22 REX1BD (ENSOARG00020004269) #23 CRLF1 (ENSOARG00020004211) #25 TMEM59L (ENSOARG00020004177) #26 KLHL26 (ENSOARG00020004115) #27 CRTC1 (ENSOARG00020003966) #28 COMP (ENSOARG00020003569) #29 UPF1 (ENSOARG00020003352) #30 CERS1 (ENSOARG00020021615) DDX49 (ENSOARG00020021548) #32 ENSOARG00020021129 #33 SUGP2 (ENSOARG00020021040) #34 ARMC6 (ENSOARG00020020947) #35 SLC25A42 (ENSOARG00020020909) #36 TMEM161A (ENSOARG00020020857) #37 MEF2B (ENSOARG00020020398) Bovinae ANCESTRAL SPECIES 34 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.q.b #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Bos ANCESTRAL SPECIES 34 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.q.b #20 ENSGT00530000064192.s #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Bos_a ANCESTRAL SPECIES 29 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT01100000263504.b.t ENSGT00390000012138.b ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.q.b #20 ENSGT00530000064192.s #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 ENSGT00390000000672.a.a #37 Wild yak MODERN SPECIES 984 ELL (ENSBMUG00000015621) #19 ENSBMUG00000015586 #20 KXD1 (ENSBMUG00000015517) #21 UBA52 (ENSBMUG00000015499) #22 REX1BD (ENSBMUG00000015467) #23 CRLF1 (ENSBMUG00000015427) #25 TMEM59L (ENSBMUG00000015381) #26 KLHL26 (ENSBMUG00000015350) #27 CRTC1 (ENSBMUG00000015292) #28 COMP (ENSBMUG00000015225) #29 UPF1 (ENSBMUG00000015177) #30 CERS1 (ENSBMUG00000015159) COPE (ENSBMUG00000015145) #31 DDX49 (ENSBMUG00000015132) #32 HOMER3 (ENSBMUG00000015101) #33 SUGP2 (ENSBMUG00000015048) #34 ARMC6 (ENSBMUG00000015012) #35 SLC25A42 (ENSBMUG00000014988) #36 TMEM161A (ENSBMUG00000014965) #37 Suina ANCESTRAL SPECIES 39 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Chacoan peccary MODERN SPECIES 769 IFI30 (ENSCWAG00000017658) MPV17L2 (ENSCWAG00000017714) #7 RAB3A (ENSCWAG00000017742) #8 PDE4C (ENSCWAG00000017847) #9 ENSCWAG00000018273 #11 JUND (ENSCWAG00000018303) #12 LSM4 (ENSCWAG00000018311) #13 PGPEP1 (ENSCWAG00000018354) #14 GDF15 (ENSCWAG00000018499) #15 LRRC25 (ENSCWAG00000018518) #16 SSBP4 (ENSCWAG00000018544) #17 ISYNA1 (ENSCWAG00000018620) #18 ELL (ENSCWAG00000018746) #19 FKBP8 (ENSCWAG00000018780) #20 KXD1 (ENSCWAG00000018851) #21 UBA52 (ENSCWAG00000018816) #22 REX1BD (ENSCWAG00000018868) #23 ENSCWAG00000018899 #24 CRLF1 (ENSCWAG00000018917) #25 TMEM59L (ENSCWAG00000018953) #26 KLHL26 (ENSCWAG00000018976) #27 CRTC1 (ENSCWAG00000019030) #28 COMP (ENSCWAG00000019235) #29 UPF1 (ENSCWAG00000019458) #30 GDF1 (ENSCWAG00000019490) CERS1 (ENSCWAG00000019515) COPE (ENSCWAG00000019578) #31 DDX49 (ENSCWAG00000019644) #32 HOMER3 (ENSCWAG00000019671) #33 SUGP2 (ENSCWAG00000019735) #34 ARMC6 (ENSCWAG00000019757) #35 Pig MODERN SPECIES 10 MPV17L2 (ENSSSCG00000013896) #7 RAB3A (ENSSSCG00000013897) #8 PDE4C (ENSSSCG00000036363) #9 ENSSSCG00000013902 #10 ENSSSCG00000053451 #11 LSM4 (ENSSSCG00000034314) #13 PGPEP1 (ENSSSCG00000039684) #14 GDF15 (ENSSSCG00000034260) #15 LRRC25 (ENSSSCG00000036963) #16 SSBP4 (ENSSSCG00000025955) #17 ISYNA1 (ENSSSCG00000040524) #18 ENSSSCG00000043019 ELL (ENSSSCG00000040181) #19 FKBP8 (ENSSSCG00000013905) #20 KXD1 (ENSSSCG00000013906) #21 UBA52 (ENSSSCG00000053292) #22 REX1BD (ENSSSCG00000040666) #23 CRLF1 (ENSSSCG00000013909) #25 TMEM59L (ENSSSCG00000013911) #26 KLHL26 (ENSSSCG00000013913) #27 CRTC1 (ENSSSCG00000013915) #28 COMP (ENSSSCG00000013916) #29 UPF1 (ENSSSCG00000039301) #30 CERS1 (ENSSSCG00000013928) COPE (ENSSSCG00000027840) #31 DDX49 (ENSSSCG00000025329) #32 HOMER3 (ENSSSCG00000013919) #33 SUGP2 (ENSSSCG00000025839) #34 ARMC6 (ENSSSCG00000049430) #35 ENSSSCG00000044637 SLC25A42 (ENSSSCG00000013927) #36 Euarchontoglires ANCESTRAL SPECIES 18 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Euarchontoglires_A ANCESTRAL SPECIES 20 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.E ##17 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Glires ANCESTRAL SPECIES 21 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.E ##17 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Rodentia ANCESTRAL SPECIES 17 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Rodentia_B ANCESTRAL SPECIES 37 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b.k ##22 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Myomorpha ANCESTRAL SPECIES 43 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b.k ##22 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Muroidea ANCESTRAL SPECIES 47 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1870 Ifi30 (ENSNGAG00000022275) Mpv17l2 (ENSNGAG00000012070) #7 Rab3a (ENSNGAG00000020872) #8 Pde4c (ENSNGAG00000004214) #9 ENSNGAG00000014618 #10 Iqcn (ENSNGAG00000014525) #11 Jund (ENSNGAG00000010099) #12 Lsm4 (ENSNGAG00000008644) #13 Pgpep1 (ENSNGAG00000022241) #14 Gdf15 (ENSNGAG00000019410) #15 Lrrc25 (ENSNGAG00000018288) #16 Ssbp4 (ENSNGAG00000023633) #17 Isyna1 (ENSNGAG00000013546) #18 Ell (ENSNGAG00000004302) #19 Fkbp8 (ENSNGAG00000001505) #20 Uba52 (ENSNGAG00000010884) #22 Rex1bd (ENSNGAG00000013627) #23 Crlf1 (ENSNGAG00000022169) #25 Tmem59l (ENSNGAG00000020797) #26 Klhl26 (ENSNGAG00000010743) #27 Crtc1 (ENSNGAG00000021475) #28 Comp (ENSNGAG00000024332) #29 Upf1 (ENSNGAG00000024107) #30 ENSNGAG00000022538 ENSNGAG00000022292 Cope (ENSNGAG00000022394) #31 Ddx49 (ENSNGAG00000019673) #32 Homer3 (ENSNGAG00000015803) #33 Sugp2 (ENSNGAG00000005936) #34 Armc6 (ENSNGAG00000021205) #35 Slc25a42 (ENSNGAG00000023980) #36 Muroidea_A ANCESTRAL SPECIES 28 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Murinae ANCESTRAL SPECIES 23 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Rat MODERN SPECIES 7 Mpv17l2 (ENSRNOG00000019394) #7 Rab3a (ENSRNOG00000019433) #8 Pde4c (ENSRNOG00000019518) #9 LOC120093089 (ENSRNOG00000043249) #10 Iqcn (ENSRNOG00000068146) #11 Jund (ENSRNOG00000019568) #12 Lsm4 (ENSRNOG00000019572) #13 Pgpep1 (ENSRNOG00000019639) #14 Mk1 (ENSRNOG00000019657) Gdf15 (ENSRNOG00000019661) #15 Lrrc25 (ENSRNOG00000022565) #16 Ssbp4 (ENSRNOG00000019698) #17 Isyna1 (ENSRNOG00000019741) #18 Ell (ENSRNOG00000019824) #19 Fkbp8 (ENSRNOG00000058359) #20 Uba52 (ENSRNOG00000019971) #22 Rex1bd (ENSRNOG00000019990) #23 Crlf1 (ENSRNOG00000020030) #25 Tmem59l (ENSRNOG00000022432) #26 Klhl26 (ENSRNOG00000020088) #27 Crtc1 (ENSRNOG00000022421) #28 Comp (ENSRNOG00000048472) #29 Upf1 (ENSRNOG00000020134) #30 Gdf1 (ENSRNOG00000070518) Cers1 (ENSRNOG00000067124) Cope (ENSRNOG00000020178) #31 Ddx49 (ENSRNOG00000022368) #32 Homer3 (ENSRNOG00000020229) #33 Sugp2 (ENSRNOG00000020269) #34 Armc6 (ENSRNOG00000020280) #35 Slc25a42 (ENSRNOG00000020345) #36 Mus ANCESTRAL SPECIES 6 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Mus_A ANCESTRAL SPECIES 8 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Ryukyu mouse DUPLICATION Ryukyu mouse MODERN SPECIES 17 Mpv17l2 (MGP_CAROLIEiJ_G0031164) #7 Rab3a (MGP_CAROLIEiJ_G0031163) #8 Pde4c (MGP_CAROLIEiJ_G0031162) #9 Gm3336 (MGP_CAROLIEiJ_G0031161) #10 MGP_CAROLIEiJ_G0031160 Jund (MGP_CAROLIEiJ_G0031159) #12 Lsm4 (MGP_CAROLIEiJ_G0031158) #13 Pgpep1 (MGP_CAROLIEiJ_G0031157) #14 Gdf15 (MGP_CAROLIEiJ_G0031156) #15 Lrrc25 (MGP_CAROLIEiJ_G0031155) #16 Ssbp4 (MGP_CAROLIEiJ_G0031154) #17 Isyna1 (MGP_CAROLIEiJ_G0031153) #18 Ell (MGP_CAROLIEiJ_G0031152) #19 Fkbp8 (MGP_CAROLIEiJ_G0031151) #20 MGP_CAROLIEiJ_G0031150 #22 MGP_CAROLIEiJ_G0031149 #22 Rex1bd (MGP_CAROLIEiJ_G0031148) #23 Crlf1 (MGP_CAROLIEiJ_G0031147) #25 Tmem59l (MGP_CAROLIEiJ_G0031146) #26 Klhl26 (MGP_CAROLIEiJ_G0031145) #27 Crtc1 (MGP_CAROLIEiJ_G0031144) #28 Comp (MGP_CAROLIEiJ_G0031143) #29 Upf1 (MGP_CAROLIEiJ_G0031142) #30 MGP_CAROLIEiJ_G0031141 Cope (MGP_CAROLIEiJ_G0031140) #31 Ddx49 (MGP_CAROLIEiJ_G0031139) #32 Homer3 (MGP_CAROLIEiJ_G0031138) #33 Sugp2 (MGP_CAROLIEiJ_G0031137) #34 Armc6 (MGP_CAROLIEiJ_G0031136) #35 Slc25a42 (MGP_CAROLIEiJ_G0031135) #36 Tmem161a (MGP_CAROLIEiJ_G0031134) #37 Ryukyu mouse DUPLICATION Ryukyu mouse MODERN SPECIES 16 Fam53b (MGP_CAROLIEiJ_G0030580) Eef1akmt2 (MGP_CAROLIEiJ_G0030581) Abraxas2 (MGP_CAROLIEiJ_G0030582) Zranb1 (MGP_CAROLIEiJ_G0030583) Ctbp2 (MGP_CAROLIEiJ_G0030584) Tex36 (MGP_CAROLIEiJ_G0030585) Edrf1 (MGP_CAROLIEiJ_G0030586) Mmp21 (MGP_CAROLIEiJ_G0030587) Uros (MGP_CAROLIEiJ_G0030588) Bccip (MGP_CAROLIEiJ_G0030589) Dhx32 (MGP_CAROLIEiJ_G0030590) Fank1 (MGP_CAROLIEiJ_G0030591) Adam12 (MGP_CAROLIEiJ_G0030592) D7Ertd443e (MGP_CAROLIEiJ_G0030593) MGP_CAROLIEiJ_G0030594 #22 MGP_CAROLIEiJ_G0030595 #22 Dock1 (MGP_CAROLIEiJ_G0030596) Insyn2a (MGP_CAROLIEiJ_G0030597) Nps (MGP_CAROLIEiJ_G0030598) MGP_CAROLIEiJ_G0030599 Foxi2 (MGP_CAROLIEiJ_G0030600) Clrn3 (MGP_CAROLIEiJ_G0030601) Ptpre (MGP_CAROLIEiJ_G0030602) MGP_CAROLIEiJ_G0030603 Mgmt (MGP_CAROLIEiJ_G0030604) Ebf3 (MGP_CAROLIEiJ_G0030605) MGP_CAROLIEiJ_G0030606 Glrx3 (MGP_CAROLIEiJ_G0030607) Tcerg1l (MGP_CAROLIEiJ_G0030608) Mapk1ip1 (MGP_CAROLIEiJ_G0030609) Ppp2r2d (MGP_CAROLIEiJ_G0030610) Ryukyu mouse MODERN SPECIES 16 Lhpp (MGP_CAROLIEiJ_G0030579) Fam53b (MGP_CAROLIEiJ_G0030580) Eef1akmt2 (MGP_CAROLIEiJ_G0030581) Abraxas2 (MGP_CAROLIEiJ_G0030582) Zranb1 (MGP_CAROLIEiJ_G0030583) Ctbp2 (MGP_CAROLIEiJ_G0030584) Tex36 (MGP_CAROLIEiJ_G0030585) Edrf1 (MGP_CAROLIEiJ_G0030586) Mmp21 (MGP_CAROLIEiJ_G0030587) Uros (MGP_CAROLIEiJ_G0030588) Bccip (MGP_CAROLIEiJ_G0030589) Dhx32 (MGP_CAROLIEiJ_G0030590) Fank1 (MGP_CAROLIEiJ_G0030591) Adam12 (MGP_CAROLIEiJ_G0030592) D7Ertd443e (MGP_CAROLIEiJ_G0030593) MGP_CAROLIEiJ_G0030594 #22 MGP_CAROLIEiJ_G0030595 #22 Dock1 (MGP_CAROLIEiJ_G0030596) Insyn2a (MGP_CAROLIEiJ_G0030597) Nps (MGP_CAROLIEiJ_G0030598) MGP_CAROLIEiJ_G0030599 Foxi2 (MGP_CAROLIEiJ_G0030600) Clrn3 (MGP_CAROLIEiJ_G0030601) Ptpre (MGP_CAROLIEiJ_G0030602) MGP_CAROLIEiJ_G0030603 Mgmt (MGP_CAROLIEiJ_G0030604) Ebf3 (MGP_CAROLIEiJ_G0030605) MGP_CAROLIEiJ_G0030606 Glrx3 (MGP_CAROLIEiJ_G0030607) Tcerg1l (MGP_CAROLIEiJ_G0030608) Mapk1ip1 (MGP_CAROLIEiJ_G0030609) Ryukyu mouse MODERN SPECIES 17 Ifi30 (MGP_CAROLIEiJ_G0031165) Mpv17l2 (MGP_CAROLIEiJ_G0031164) #7 Rab3a (MGP_CAROLIEiJ_G0031163) #8 Pde4c (MGP_CAROLIEiJ_G0031162) #9 Gm3336 (MGP_CAROLIEiJ_G0031161) #10 MGP_CAROLIEiJ_G0031160 Jund (MGP_CAROLIEiJ_G0031159) #12 Lsm4 (MGP_CAROLIEiJ_G0031158) #13 Pgpep1 (MGP_CAROLIEiJ_G0031157) #14 Gdf15 (MGP_CAROLIEiJ_G0031156) #15 Lrrc25 (MGP_CAROLIEiJ_G0031155) #16 Ssbp4 (MGP_CAROLIEiJ_G0031154) #17 Isyna1 (MGP_CAROLIEiJ_G0031153) #18 Ell (MGP_CAROLIEiJ_G0031152) #19 Fkbp8 (MGP_CAROLIEiJ_G0031151) #20 MGP_CAROLIEiJ_G0031150 #22 MGP_CAROLIEiJ_G0031149 #22 Rex1bd (MGP_CAROLIEiJ_G0031148) #23 Crlf1 (MGP_CAROLIEiJ_G0031147) #25 Tmem59l (MGP_CAROLIEiJ_G0031146) #26 Klhl26 (MGP_CAROLIEiJ_G0031145) #27 Crtc1 (MGP_CAROLIEiJ_G0031144) #28 Comp (MGP_CAROLIEiJ_G0031143) #29 Upf1 (MGP_CAROLIEiJ_G0031142) #30 MGP_CAROLIEiJ_G0031141 Cope (MGP_CAROLIEiJ_G0031140) #31 Ddx49 (MGP_CAROLIEiJ_G0031139) #32 Homer3 (MGP_CAROLIEiJ_G0031138) #33 Sugp2 (MGP_CAROLIEiJ_G0031137) #34 Armc6 (MGP_CAROLIEiJ_G0031136) #35 Slc25a42 (MGP_CAROLIEiJ_G0031135) #36 Mus_B ANCESTRAL SPECIES 6 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Mouse MODERN SPECIES 17 Mpv17l2 (ENSMUSG00000035559) #7 Rab3a (ENSMUSG00000031840) #8 Pde4c (ENSMUSG00000031842) #9 Gm3336 (ENSMUSG00000095026) #10 Iqcn (ENSMUSG00000110622) #11 Jund (ENSMUSG00000071076) #12 Lsm4 (ENSMUSG00000031848) #13 Pgpep1 (ENSMUSG00000056204) #14 Gdf15 (ENSMUSG00000038508) #15 Lrrc25 (ENSMUSG00000049988) #16 Ssbp4 (ENSMUSG00000070003) #17 Isyna1 (ENSMUSG00000019139) #18 Ell (ENSMUSG00000070002) #19 Fkbp8 (ENSMUSG00000019428) #20 Kxd1 (ENSMUSG00000055553) ##22 Uba52 (ENSMUSG00000090137) #22 Rex1bd (ENSMUSG00000058833) #23 Crlf1 (ENSMUSG00000007888) #25 Tmem59l (ENSMUSG00000035964) #26 Klhl26 (ENSMUSG00000055707) #27 Crtc1 (ENSMUSG00000003575) #28 Comp (ENSMUSG00000031849) #29 Upf1 (ENSMUSG00000058301) #30 Gdf1 (ENSMUSG00000109523) Cers1 (ENSMUSG00000087408) Cope (ENSMUSG00000055681) #31 Ddx49 (ENSMUSG00000057788) #32 Homer3 (ENSMUSG00000003573) #33 Sugp2 (ENSMUSG00000036054) #34 Armc6 (ENSMUSG00000002343) #35 Slc25a42 (ENSMUSG00000002346) #36 Mus_C ANCESTRAL SPECIES 5 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00680000100785 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Steppe mouse MODERN SPECIES 2845 Ccdc157 (ENSMSIG00000002493) Rnf215 (ENSMSIG00000002532) ENSMSIG00000002570 Sec14l2 (ENSMSIG00000002585) Mtfp1 (ENSMSIG00000002619) ENSMSIG00000002649 Sec14l4 (ENSMSIG00000002672) Gal3st1 (ENSMSIG00000002697) Pes1 (ENSMSIG00000002758) 4930556J24Rik (ENSMSIG00000002859) ENSMSIG00000002894 Tcn2 (ENSMSIG00000002908) Slc35e4 (ENSMSIG00000002976) Dusp18 (ENSMSIG00000002994) ENSMSIG00000003003 ENSMSIG00000003026 #22 Osbp2 (ENSMSIG00000003063) Morc2a (ENSMSIG00000003158) ENSMSIG00000003275 ENSMSIG00000003292 Smtn (ENSMSIG00000003334) Selenom (ENSMSIG00000003733) Inpp5j (ENSMSIG00000003757) Pla2g3 (ENSMSIG00000003865) ENSMSIG00000003911 Rnf185 (ENSMSIG00000003936) Limk2 (ENSMSIG00000004000) Pik3ip1 (ENSMSIG00000004277) Patz1 (ENSMSIG00000004323) Drg1 (ENSMSIG00000004401) spretus DUPLICATION spretus MODERN SPECIES 17 Ifi30 (MGP_SPRETEiJ_G0032283) Mpv17l2 (MGP_SPRETEiJ_G0032282) #7 Rab3a (MGP_SPRETEiJ_G0032281) #8 Pde4c (MGP_SPRETEiJ_G0032280) #9 Gm3336 (MGP_SPRETEiJ_G0032279) #10 MGP_SPRETEiJ_G0032278 Jund (MGP_SPRETEiJ_G0032277) #12 Lsm4 (MGP_SPRETEiJ_G0032276) #13 Pgpep1 (MGP_SPRETEiJ_G0032275) #14 Gdf15 (MGP_SPRETEiJ_G0032274) #15 Lrrc25 (MGP_SPRETEiJ_G0032273) #16 Ssbp4 (MGP_SPRETEiJ_G0032272) #17 Isyna1 (MGP_SPRETEiJ_G0032271) #18 Ell (MGP_SPRETEiJ_G0032270) #19 Fkbp8 (MGP_SPRETEiJ_G0032269) #20 MGP_SPRETEiJ_G0032268 #22 MGP_SPRETEiJ_G0032267 #22 Rex1bd (MGP_SPRETEiJ_G0032266) #23 Crlf1 (MGP_SPRETEiJ_G0032265) #25 Tmem59l (MGP_SPRETEiJ_G0032264) #26 Klhl26 (MGP_SPRETEiJ_G0032263) #27 Crtc1 (MGP_SPRETEiJ_G0032262) #28 Comp (MGP_SPRETEiJ_G0032261) #29 Upf1 (MGP_SPRETEiJ_G0032260) #30 MGP_SPRETEiJ_G0032259 Cope (MGP_SPRETEiJ_G0032258) #31 Ddx49 (MGP_SPRETEiJ_G0032257) #32 Homer3 (MGP_SPRETEiJ_G0032256) #33 Sugp2 (MGP_SPRETEiJ_G0032255) #34 Armc6 (MGP_SPRETEiJ_G0032254) #35 Slc25a42 (MGP_SPRETEiJ_G0032253) #36 spretus MODERN SPECIES 17 Mpv17l2 (MGP_SPRETEiJ_G0032282) #7 Rab3a (MGP_SPRETEiJ_G0032281) #8 Pde4c (MGP_SPRETEiJ_G0032280) #9 Gm3336 (MGP_SPRETEiJ_G0032279) #10 MGP_SPRETEiJ_G0032278 Jund (MGP_SPRETEiJ_G0032277) #12 Lsm4 (MGP_SPRETEiJ_G0032276) #13 Pgpep1 (MGP_SPRETEiJ_G0032275) #14 Gdf15 (MGP_SPRETEiJ_G0032274) #15 Lrrc25 (MGP_SPRETEiJ_G0032273) #16 Ssbp4 (MGP_SPRETEiJ_G0032272) #17 Isyna1 (MGP_SPRETEiJ_G0032271) #18 Ell (MGP_SPRETEiJ_G0032270) #19 Fkbp8 (MGP_SPRETEiJ_G0032269) #20 MGP_SPRETEiJ_G0032268 #22 MGP_SPRETEiJ_G0032267 #22 Rex1bd (MGP_SPRETEiJ_G0032266) #23 Crlf1 (MGP_SPRETEiJ_G0032265) #25 Tmem59l (MGP_SPRETEiJ_G0032264) #26 Klhl26 (MGP_SPRETEiJ_G0032263) #27 Crtc1 (MGP_SPRETEiJ_G0032262) #28 Comp (MGP_SPRETEiJ_G0032261) #29 Upf1 (MGP_SPRETEiJ_G0032260) #30 MGP_SPRETEiJ_G0032259 Cope (MGP_SPRETEiJ_G0032258) #31 Ddx49 (MGP_SPRETEiJ_G0032257) #32 Homer3 (MGP_SPRETEiJ_G0032256) #33 Sugp2 (MGP_SPRETEiJ_G0032255) #34 Armc6 (MGP_SPRETEiJ_G0032254) #35 Slc25a42 (MGP_SPRETEiJ_G0032253) #36 Tmem161a (MGP_SPRETEiJ_G0032252) #37 Cricetidae ANCESTRAL SPECIES 30 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Cricetidae_B ANCESTRAL SPECIES 17 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Prairie vole MODERN SPECIES 164 Ifi30 (ENSMOCG00000001163) Mpv17l2 (ENSMOCG00000009680) #7 Rab3a (ENSMOCG00000016750) #8 Pde4c (ENSMOCG00000015883) #9 Gm3336 (ENSMOCG00000017470) #10 Iqcn (ENSMOCG00000009272) #11 Jund (ENSMOCG00000005294) #12 Lsm4 (ENSMOCG00000020861) #13 Pgpep1 (ENSMOCG00000019971) #14 Gdf15 (ENSMOCG00000000065) #15 Lrrc25 (ENSMOCG00000000947) #16 Ssbp4 (ENSMOCG00000019818) #17 ENSMOCG00000013794 #18 Ell (ENSMOCG00000013489) #19 Fkbp8 (ENSMOCG00000015712) #20 Uba52 (ENSMOCG00000015677) #22 Rex1bd (ENSMOCG00000014306) #23 Crlf1 (ENSMOCG00000007746) #25 Tmem59l (ENSMOCG00000010649) #26 Klhl26 (ENSMOCG00000017635) #27 Crtc1 (ENSMOCG00000005553) #28 Comp (ENSMOCG00000004567) #29 Upf1 (ENSMOCG00000005699) #30 ENSMOCG00000000275 ENSMOCG00000004861 Cope (ENSMOCG00000014940) #31 Ddx49 (ENSMOCG00000018690) #32 Homer3 (ENSMOCG00000013590) #33 Sugp2 (ENSMOCG00000009704) #34 Armc6 (ENSMOCG00000014288) #35 Slc25a42 (ENSMOCG00000012570) #36 Cricetinae ANCESTRAL SPECIES 36 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Golden Hamster MODERN SPECIES 831 Ifi30 (ENSMAUG00000016704) Mpv17l2 (ENSMAUG00000001144) #7 Rab3a (ENSMAUG00000005339) #8 Pde4c (ENSMAUG00000016880) #9 Gm3336 (ENSMAUG00000001502) #10 Iqcn (ENSMAUG00000021279) #11 Jund (ENSMAUG00000019892) #12 ENSMAUG00000018936 Pgpep1 (ENSMAUG00000020690) #14 Gdf15 (ENSMAUG00000014895) #15 Lrrc25 (ENSMAUG00000018197) #16 Ssbp4 (ENSMAUG00000011895) #17 Isyna1 (ENSMAUG00000021573) #18 Ell (ENSMAUG00000014805) #19 Fkbp8 (ENSMAUG00000010945) #20 Uba52 (ENSMAUG00000002775) #22 Rex1bd (ENSMAUG00000015830) #23 Crlf1 (ENSMAUG00000021052) #25 Tmem59l (ENSMAUG00000006146) #26 Klhl26 (ENSMAUG00000021352) #27 Crtc1 (ENSMAUG00000019225) #28 Comp (ENSMAUG00000010602) #29 Upf1 (ENSMAUG00000011398) #30 ENSMAUG00000012872 ENSMAUG00000011350 Cope (ENSMAUG00000016322) #31 Ddx49 (ENSMAUG00000010235) #32 Homer3 (ENSMAUG00000014150) #33 Sugp2 (ENSMAUG00000011371) #34 Armc6 (ENSMAUG00000011324) #35 Slc25a42 (ENSMAUG00000018082) #36 Chinese hamster chok1gshd MODERN SPECIES 184 Ifi30 (ENSCGRG00001020539) Mpv17l2 (ENSCGRG00001017497) #7 Rab3a (ENSCGRG00001021376) #8 Pde4c (ENSCGRG00001018842) #9 Gm3336 (ENSCGRG00001023238) #10 Iqcn (ENSCGRG00001004411) #11 Jund (ENSCGRG00001010573) #12 Lsm4 (ENSCGRG00001014436) #13 Pgpep1 (ENSCGRG00001016516) #14 Gdf15 (ENSCGRG00001016811) #15 Lrrc25 (ENSCGRG00001015091) #16 Ssbp4 (ENSCGRG00001016735) #17 Isyna1 (ENSCGRG00001022885) #18 Ell (ENSCGRG00001009009) #19 Fkbp8 (ENSCGRG00001012652) #20 Uba52 (ENSCGRG00001018293) #22 Rex1bd (ENSCGRG00001023832) #23 Crlf1 (ENSCGRG00001017905) #25 Tmem59l (ENSCGRG00001018799) #26 Klhl26 (ENSCGRG00001020014) #27 Crtc1 (ENSCGRG00001002202) #28 Comp (ENSCGRG00001009171) #29 Upf1 (ENSCGRG00001021067) #30 ENSCGRG00001006921 ENSCGRG00001019774 COPE (ENSCGRG00001024248) #31 Ddx49 (ENSCGRG00001009467) #32 Homer3 (ENSCGRG00001014952) #33 Sugp2 (ENSCGRG00001018264) #34 Armc6 (ENSCGRG00001019296) #35 Slc25a42 (ENSCGRG00001022045) #36 Rodentia_A ANCESTRAL SPECIES 16 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Hystricomorpha ANCESTRAL SPECIES 47 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.d ##22 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Hystricomorpha_a ANCESTRAL SPECIES 55 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Guinea pig MODERN SPECIES 72 PIK3R2 (ENSCPOG00000024452) Ifi30 (ENSCPOG00000005553) RAB3A (ENSCPOG00000038085) #8 MPV17L2 (ENSCPOG00000039365) #7 PDE4C (ENSCPOG00000030930) #9 ENSCPOG00000035754 #10 JUND (ENSCPOG00000025912) #12 LSM4 (ENSCPOG00000024117) #13 PGPEP1 (ENSCPOG00000031925) #14 GDF15 (ENSCPOG00000032675) #15 ENSCPOG00000031969 #16 ENSCPOG00000025088 ##17 ISYNA1 (ENSCPOG00000027332) #18 ELL (ENSCPOG00000022431) #19 FKBP8 (ENSCPOG00000026709) #20 UBA52 (ENSCPOG00000025880) #22 CRLF1 (ENSCPOG00000021160) #25 TMEM59L (ENSCPOG00000021490) #26 KLHL26 (ENSCPOG00000020718) #27 CRTC1 (ENSCPOG00000034343) #28 COMP (ENSCPOG00000025029) #29 UPF1 (ENSCPOG00000025463) #30 GDF1 (ENSCPOG00000031791) CERS1 (ENSCPOG00000033783) COPE (ENSCPOG00000013624) #31 DDX49 (ENSCPOG00000013626) #32 HOMER3 (ENSCPOG00000004565) #33 SUGP2 (ENSCPOG00000006372) #34 ARMC6 (ENSCPOG00000006374) #35 SLC25A42 (ENSCPOG00000013086) #36 TMEM161A (ENSCPOG00000013640) #37 Hystricomorpha_b ANCESTRAL SPECIES 66 ENSGT00940000157166 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Long-tailed chinchilla MODERN SPECIES 231 ARRDC2 (ENSCLAG00000005752) MAST3 (ENSCLAG00000012903) PIK3R2 (ENSCLAG00000014107) IFI30 (ENSCLAG00000016108) MPV17L2 (ENSCLAG00000015953) #7 RAB3A (ENSCLAG00000015642) #8 PDE4C (ENSCLAG00000016330) #9 LSM4 (ENSCLAG00000010828) #13 PGPEP1 (ENSCLAG00000010542) #14 GDF15 (ENSCLAG00000010045) #15 ENSCLAG00000009618 #16 SSBP4 (ENSCLAG00000013009) #17 ISYNA1 (ENSCLAG00000008992) #18 ELL (ENSCLAG00000007609) #19 FKBP8 (ENSCLAG00000005953) #20 UBA52 (ENSCLAG00000005686) #22 ENSCLAG00000007191 #23 CRLF1 (ENSCLAG00000006697) #25 TMEM59L (ENSCLAG00000006357) #26 KLHL26 (ENSCLAG00000006029) #27 CRTC1 (ENSCLAG00000005682) #28 COMP (ENSCLAG00000005109) #29 UPF1 (ENSCLAG00000004037) #30 CERS1 (ENSCLAG00000003897) COPE (ENSCLAG00000003621) #31 DDX49 (ENSCLAG00000012844) #32 HOMER3 (ENSCLAG00000011599) #33 SUGP2 (ENSCLAG00000011375) #34 ARMC6 (ENSCLAG00000008215) #35 SLC25A42 (ENSCLAG00000008004) #36 TMEM161A (ENSCLAG00000007578) #37 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 323 ARRDC2 (ENSODEG00000013689) ENSODEG00000012843 ENSODEG00000012781 PIK3R2 (ENSODEG00000013440) IFI30 (ENSODEG00000014388) MPV17L2 (ENSODEG00000013238) #7 RAB3A (ENSODEG00000012269) #8 PDE4C (ENSODEG00000013172) #9 JUND (ENSODEG00000013414) #12 ENSODEG00000011712 #13 PGPEP1 (ENSODEG00000012364) #14 SSBP4 (ENSODEG00000012832) #17 ISYNA1 (ENSODEG00000011920) #18 ELL (ENSODEG00000012821) #19 ENSODEG00000013486 #20 ENSODEG00000012337 #22 REX1BD (ENSODEG00000013625) #23 CRLF1 (ENSODEG00000012883) #25 TMEM59L (ENSODEG00000012052) #26 KLHL26 (ENSODEG00000012544) #27 CRTC1 (ENSODEG00000011739) #28 COMP (ENSODEG00000015412) #29 UPF1 (ENSODEG00000012426) #30 GDF1 (ENSODEG00000011857) CERS1 (ENSODEG00000011214) COPE (ENSODEG00000011547) #31 DDX49 (ENSODEG00000011203) #32 HOMER3 (ENSODEG00000014870) #33 SUGP2 (ENSODEG00000012058) #34 ARMC6 (ENSODEG00000012613) #35 SLC25A42 (ENSODEG00000012168) #36 Degu MODERN SPECIES 68 ENSODEG00000010322 ENSODEG00000009802 ENSODEG00000009981 DPP6 (ENSODEG00000011104) PAXIP1 (ENSODEG00000011288) HTR5A (ENSODEG00000014269) INSIG1 (ENSODEG00000010315) EN2 (ENSODEG00000010942) ENSODEG00000010168 ENSODEG00000010830 ENSODEG00000009918 SHH (ENSODEG00000010106) ENSODEG00000019851 RNF32 (ENSODEG00000010017) ENSODEG00000010749 ENSODEG00000019843 #22 NOM1 (ENSODEG00000009399) MNX1 (ENSODEG00000010950) UBE3C (ENSODEG00000009899) ENSODEG00000011519 NCAPG2 (ENSODEG00000012038) ESYT2 (ENSODEG00000011842) ENSODEG00000010339 DYNC2I1 (ENSODEG00000013131) VIPR2 (ENSODEG00000009696) Degu MODERN SPECIES 130 ENSODEG00000007325 ENSODEG00000007255 DIS3L2 (ENSODEG00000007857) ENSODEG00000019419 NPPC (ENSODEG00000007066) COPS7B (ENSODEG00000006886) ENSODEG00000006860 ENSODEG00000007492 NMUR1 (ENSODEG00000006998) ENSODEG00000007803 B3GNT7 (ENSODEG00000008876) ARMC9 (ENSODEG00000008401) HTR2B (ENSODEG00000007544) ENSODEG00000006511 SPATA3 (ENSODEG00000006991) ENSODEG00000019367 #22 ITM2C (ENSODEG00000007143) CAB39 (ENSODEG00000006973) ENSODEG00000006353 ENSODEG00000010013 ENSODEG00000007283 SLC16A14 (ENSODEG00000007138) TRIP12 (ENSODEG00000009098) ENSODEG00000007427 DNER (ENSODEG00000006981) PID1 (ENSODEG00000008905) Degu MODERN SPECIES 118 SPATA2 (ENSODEG00000006882) SLC9A8 (ENSODEG00000007225) ENSODEG00000006524 PTGIS (ENSODEG00000006946) KCNB1 (ENSODEG00000007239) ZNFX1 (ENSODEG00000006490) DDX27 (ENSODEG00000006281) STAU1 (ENSODEG00000006523) ENSODEG00000006918 ARFGEF2 (ENSODEG00000008385) PREX1 (ENSODEG00000007710) ENSODEG00000007170 SULF2 (ENSODEG00000007688) ENSODEG00000006958 NCOA3 (ENSODEG00000007613) ENSODEG00000019407 #22 ZMYND8 (ENSODEG00000008445) EYA2 (ENSODEG00000007072) ENSODEG00000008444 ENSODEG00000008838 SLC2A10 (ENSODEG00000009271) TP53RK (ENSODEG00000009596) SLC13A3 (ENSODEG00000007662) OCSTAMP (ENSODEG00000007890) ENSODEG00000019611 ENSODEG00000009097 ELMO2 (ENSODEG00000007725) ENSODEG00000008484 ENSODEG00000008707 CDH22 (ENSODEG00000007669) CD40 (ENSODEG00000008051) Sciuridae ANCESTRAL SPECIES 20 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.k #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Eurasian red squirrel MODERN SPECIES 7 IFI30 (ENSSVLG00005025456) MPV17L2 (ENSSVLG00005025463) #7 RAB3A (ENSSVLG00005025472) #8 PDE4C (ENSSVLG00005025492) #9 ENSSVLG00005025525 #11 JUND (ENSSVLG00005025531) #12 LSM4 (ENSSVLG00005025539) #13 PGPEP1 (ENSSVLG00005025546) #14 GDF15 (ENSSVLG00005025552) #15 LRRC25 (ENSSVLG00005025559) #16 SSBP4 (ENSSVLG00005025573) #17 ISYNA1 (ENSSVLG00005025602) #18 ELL (ENSSVLG00005025617) #19 FKBP8 (ENSSVLG00005025627) #20 KXD1 (ENSSVLG00005025639) #21 UBA52 (ENSSVLG00005025643) #22 REX1BD (ENSSVLG00005015816) #23 CRLF1 (ENSSVLG00005015862) #25 TMEM59L (ENSSVLG00005015929) #26 KLHL26 (ENSSVLG00005015974) #27 CRTC1 (ENSSVLG00005016088) #28 COMP (ENSSVLG00005016356) #29 UPF1 (ENSSVLG00005016436) #30 CERS1 (ENSSVLG00005016494) COPE (ENSSVLG00005016567) #31 DDX49 (ENSSVLG00005016654) #32 HOMER3 (ENSSVLG00005016701) #33 SUGP2 (ENSSVLG00005016823) #34 ARMC6 (ENSSVLG00005016951) #35 SLC25A42 (ENSSVLG00005017005) #36 TMEM161A (ENSSVLG00005017057) #37 Marmotini ANCESTRAL SPECIES 12 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.k #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Marmotini_b ANCESTRAL SPECIES 12 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.k #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Arctic ground squirrel MODERN SPECIES 73 PIK3R2 (ENSUPAG00010018802) IFI30 (ENSUPAG00010018797) MPV17L2 (ENSUPAG00010018792) #7 RAB3A (ENSUPAG00010018778) #8 PDE4C (ENSUPAG00010018713) #9 ENSUPAG00010018681 #11 JUND (ENSUPAG00010018676) #12 ENSUPAG00010018660 #13 PGPEP1 (ENSUPAG00010018652) #14 GDF15 (ENSUPAG00010018644) #15 LRRC25 (ENSUPAG00010018637) #16 SSBP4 (ENSUPAG00010018547) #17 ISYNA1 (ENSUPAG00010018527) #18 ELL (ENSUPAG00010018509) #19 FKBP8 (ENSUPAG00010018474) #20 UBA52 (ENSUPAG00010018444) #22 REX1BD (ENSUPAG00010018419) #23 CRLF1 (ENSUPAG00010018403) #25 TMEM59L (ENSUPAG00010018396) #26 KLHL26 (ENSUPAG00010018384) #27 CRTC1 (ENSUPAG00010018349) #28 COMP (ENSUPAG00010018331) #29 UPF1 (ENSUPAG00010018302) #30 GDF1 (ENSUPAG00010018300) CERS1 (ENSUPAG00010018294) COPE (ENSUPAG00010018276) #31 DDX49 (ENSUPAG00010018246) #32 HOMER3 (ENSUPAG00010018230) #33 SUGP2 (ENSUPAG00010018216) #34 ARMC6 (ENSUPAG00010018208) #35 SLC25A42 (ENSUPAG00010018191) #36 Squirrel MODERN SPECIES 196 PIK3R2 (ENSSTOG00000001921) IFI30 (ENSSTOG00000001939) MPV17L2 (ENSSTOG00000023670) #7 RAB3A (ENSSTOG00000002981) #8 PDE4C (ENSSTOG00000000320) #9 ENSSTOG00000033779 #10 IQCN (ENSSTOG00000025440) #11 LSM4 (ENSSTOG00000016494) #13 PGPEP1 (ENSSTOG00000003948) #14 GDF15 (ENSSTOG00000022430) #15 LRRC25 (ENSSTOG00000013485) #16 SSBP4 (ENSSTOG00000029026) #17 ISYNA1 (ENSSTOG00000022613) #18 ELL (ENSSTOG00000004646) #19 FKBP8 (ENSSTOG00000014068) #20 UBA52 (ENSSTOG00000004678) #22 REX1BD (ENSSTOG00000004692) #23 CRLF1 (ENSSTOG00000004708) #25 TMEM59L (ENSSTOG00000013508) #26 KLHL26 (ENSSTOG00000026260) #27 CRTC1 (ENSSTOG00000022992) #28 COMP (ENSSTOG00000026172) #29 UPF1 (ENSSTOG00000009196) #30 GDF1 (ENSSTOG00000020887) CERS1 (ENSSTOG00000029010) COPE (ENSSTOG00000006736) #31 DDX49 (ENSSTOG00000006749) #32 HOMER3 (ENSSTOG00000029095) #33 SUGP2 (ENSSTOG00000026887) #34 ARMC6 (ENSSTOG00000012997) #35 SLC25A42 (ENSSTOG00000022047) #36 Primates ANCESTRAL SPECIES 18 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Haplorrhini ANCESTRAL SPECIES 14 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Tarsier MODERN SPECIES 2425 ELL (ENSTSYG00000026247) #19 FKBP8 (ENSTSYG00000030674) #20 UBA52 (ENSTSYG00000025864) #22 Simiiformes ANCESTRAL SPECIES 13 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Platyrrhini ANCESTRAL SPECIES 25 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395.l #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081.g.a #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Cebidae ANCESTRAL SPECIES 8 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001.a #16 ENSGT00950000183049.C #17 ENSGT00390000018395.l.c #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081.g.a #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Cebidae_a ANCESTRAL SPECIES 48 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001.a #16 ENSGT00950000183049.C #17 ENSGT00390000018395.l.c #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081.g.a #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Capuchin MODERN SPECIES 280 IFI30 (ENSCCAG00000000030) MPV17L2 (ENSCCAG00000030804) #7 RAB3A (ENSCCAG00000025412) #8 PDE4C (ENSCCAG00000034162) #9 IQCN (ENSCCAG00000021916) #11 JUND (ENSCCAG00000014839) #12 LSM4 (ENSCCAG00000036308) #13 PGPEP1 (ENSCCAG00000038062) #14 LRRC25 (ENSCCAG00000010954) #16 GDF15 (ENSCCAG00000024961) #15 SSBP4 (ENSCCAG00000028026) #17 ENSCCAG00000034050 #18 ELL (ENSCCAG00000018316) #19 FKBP8 (ENSCCAG00000026822) #20 KXD1 (ENSCCAG00000037734) #21 UBA52 (ENSCCAG00000020993) #22 REX1BD (ENSCCAG00000025734) #23 CRLF1 (ENSCCAG00000027668) #25 TMEM59L (ENSCCAG00000030314) #26 KLHL26 (ENSCCAG00000019068) #27 CRTC1 (ENSCCAG00000023281) #28 COMP (ENSCCAG00000032561) #29 UPF1 (ENSCCAG00000032175) #30 GDF1 (ENSCCAG00000027600) CERS1 (ENSCCAG00000033033) COPE (ENSCCAG00000036516) #31 DDX49 (ENSCCAG00000036092) #32 HOMER3 (ENSCCAG00000024819) #33 SUGP2 (ENSCCAG00000023178) #34 ARMC6 (ENSCCAG00000027993) #35 SLC25A42 (ENSCCAG00000028461) #36 Bolivian squirrel monkey MODERN SPECIES 199 MAST3 (ENSSBOG00000029746) PIK3R2 (ENSSBOG00000034199) IFI30 (ENSSBOG00000023021) MPV17L2 (ENSSBOG00000027135) #7 RAB3A (ENSSBOG00000022908) #8 PDE4C (ENSSBOG00000030911) #9 IQCN (ENSSBOG00000025869) #11 LSM4 (ENSSBOG00000022455) #13 PGPEP1 (ENSSBOG00000026995) #14 GDF15 (ENSSBOG00000031274) #15 ENSSBOG00000035371 #16 SSBP4 (ENSSBOG00000023739) #17 ENSSBOG00000028796 #18 ELL (ENSSBOG00000025773) #19 FKBP8 (ENSSBOG00000026752) #20 UBA52 (ENSSBOG00000024000) #22 REX1BD (ENSSBOG00000030684) #23 CRLF1 (ENSSBOG00000029563) #25 TMEM59L (ENSSBOG00000019651) #26 KLHL26 (ENSSBOG00000031453) #27 CRTC1 (ENSSBOG00000032842) #28 COMP (ENSSBOG00000003799) #29 UPF1 (ENSSBOG00000023632) #30 GDF1 (ENSSBOG00000035053) CERS1 (ENSSBOG00000000038) COPE (ENSSBOG00000014113) #31 DDX49 (ENSSBOG00000035812) #32 HOMER3 (ENSSBOG00000030722) #33 SUGP2 (ENSSBOG00000020629) #34 ENSSBOG00000024227 #35 SLC25A42 (ENSSBOG00000024288) #36 Mas night monkey MODERN SPECIES 1353 PIK3R2 (ENSANAG00000001008) IFI30 (ENSANAG00000032341) MPV17L2 (ENSANAG00000008820) #7 RAB3A (ENSANAG00000030989) #8 PDE4C (ENSANAG00000020146) #9 IQCN (ENSANAG00000024831) #11 LSM4 (ENSANAG00000034659) #13 PGPEP1 (ENSANAG00000025508) #14 GDF15 (ENSANAG00000030690) #15 LRRC25 (ENSANAG00000030759) #16 SSBP4 (ENSANAG00000033180) #17 ENSANAG00000037789 #18 ELL (ENSANAG00000037567) #19 ENSANAG00000019584 FKBP8 (ENSANAG00000018877) #20 UBA52 (ENSANAG00000037329) #22 REX1BD (ENSANAG00000031851) #23 CRLF1 (ENSANAG00000022571) #25 TMEM59L (ENSANAG00000037189) #26 KLHL26 (ENSANAG00000022024) #27 ENSANAG00000030890 #28 COMP (ENSANAG00000023447) #29 UPF1 (ENSANAG00000024107) #30 GDF1 (ENSANAG00000037936) COPE (ENSANAG00000018604) #31 DDX49 (ENSANAG00000031415) #32 ENSANAG00000020793 #33 SUGP2 (ENSANAG00000027159) #34 ARMC6 (ENSANAG00000025554) #35 SLC25A42 (ENSANAG00000030310) #36 TMEM161A (ENSANAG00000034160) #37 Catarrhini ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Hominoidea ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C.e.a #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Hominidae ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C.e.a #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Orangutan MODERN SPECIES 10 ENSPPYG00000009732 #7 RAB3A (ENSPPYG00000009575) #8 PDE4C (ENSPPYG00000009734) #9 ENSPPYG00000029846 #10 IQCN (ENSPPYG00000009735) #11 JUND (ENSPPYG00000030870) #12 LSM4 (ENSPPYG00000009736) #13 PGPEP1 (ENSPPYG00000034816) #14 GDF15 (ENSPPYG00000009739) #15 LRRC25 (ENSPPYG00000009740) #16 SSBP4 (ENSPPYG00000009741) #17 ISYNA1 (ENSPPYG00000009742) #18 ELL (ENSPPYG00000037377) #19 FKBP8 (ENSPPYG00000009744) #20 ENSPPYG00000034496 #21 UBA52 (ENSPPYG00000034989) #22 REX1BD (ENSPPYG00000009747) #23 CRLF1 (ENSPPYG00000009748) #25 TMEM59L (ENSPPYG00000009749) #26 KLHL26 (ENSPPYG00000009750) #27 CRTC1 (ENSPPYG00000009751) #28 COMP (ENSPPYG00000036755) #29 UPF1 (ENSPPYG00000009752) #30 CERS1 (ENSPPYG00000029471) COPE (ENSPPYG00000009753) #31 DDX49 (ENSPPYG00000009755) #32 HOMER3 (ENSPPYG00000035001) #33 SUGP2 (ENSPPYG00000009756) #34 ARMC6 (ENSPPYG00000009757) #35 SLC25A42 (ENSPPYG00000009758) #36 TMEM161A (ENSPPYG00000009759) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C.e.a #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Gorilla MODERN SPECIES 10 ENSGGOG00000016197 IFI30 (ENSGGOG00000012247) MPV17L2 (ENSGGOG00000008883) #7 RAB3A (ENSGGOG00000008890) #8 PDE4C (ENSGGOG00000010732) #9 IQCN (ENSGGOG00000015207) #11 ENSGGOG00000028553 #12 LSM4 (ENSGGOG00000012914) #13 PGPEP1 (ENSGGOG00000013744) #14 GDF15 (ENSGGOG00000016924) #15 LRRC25 (ENSGGOG00000016928) #16 SSBP4 (ENSGGOG00000016931) #17 ISYNA1 (ENSGGOG00000016939) #18 ENSGGOG00000002438 #19 FKBP8 (ENSGGOG00000012866) #20 ENSGGOG00000004628 #22 ENSGGOG00000036627 #24 REX1BD (ENSGGOG00000026716) #23 CRLF1 (ENSGGOG00000010973) #25 TMEM59L (ENSGGOG00000011271) #26 KLHL26 (ENSGGOG00000007063) #27 CRTC1 (ENSGGOG00000000987) #28 COMP (ENSGGOG00000007897) #29 UPF1 (ENSGGOG00000002608) #30 ENSGGOG00000025662 COPE (ENSGGOG00000006987) #31 DDX49 (ENSGGOG00000037966) #32 HOMER3 (ENSGGOG00000007011) #33 SUGP2 (ENSGGOG00000013540) #34 ARMC6 (ENSGGOG00000006708) #35 SLC25A42 (ENSGGOG00000008113) #36 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C.e.a #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Human MODERN SPECIES 10 RAB3A (ENSG00000105649) #8 ENSG00000285188 PDE4C (ENSG00000105650) #9 ENSG00000284797 #10 IQCN (ENSG00000130518) #11 JUND (ENSG00000130522) #12 LSM4 (ENSG00000130520) #13 PGPEP1 (ENSG00000130517) #14 GDF15 (ENSG00000130513) #15 LRRC25 (ENSG00000175489) #16 SSBP4 (ENSG00000130511) #17 ISYNA1 (ENSG00000105655) #18 ELL (ENSG00000105656) #19 FKBP8 (ENSG00000105701) #20 KXD1 (ENSG00000105700) #21 UBA52 (ENSG00000221983) #22 CRLF1 (ENSG00000006016) #25 REX1BD (ENSG00000006015) #23 TMEM59L (ENSG00000105696) #26 KLHL26 (ENSG00000167487) #27 CRTC1 (ENSG00000105662) #28 COMP (ENSG00000105664) #29 UPF1 (ENSG00000005007) #30 GDF1 (ENSG00000130283) CERS1 (ENSG00000223802) COPE (ENSG00000105669) #31 DDX49 (ENSG00000105671) #32 HOMER3 (ENSG00000051128) #33 SUGP2 (ENSG00000064607) #34 ARMC6 (ENSG00000105676) #35 SLC25A42 (ENSG00000181035) #36 Pan ANCESTRAL SPECIES 14 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C.e.a #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Bonobo MODERN SPECIES 10 MAST3 (ENSPPAG00000037942) PIK3R2 (ENSPPAG00000028206) IFI30 (ENSPPAG00000034079) MPV17L2 (ENSPPAG00000039781) #7 RAB3A (ENSPPAG00000028870) #8 PDE4C (ENSPPAG00000032992) #9 IQCN (ENSPPAG00000036393) #11 ENSPPAG00000044045 #13 PGPEP1 (ENSPPAG00000029656) #14 GDF15 (ENSPPAG00000038519) #15 LRRC25 (ENSPPAG00000042781) #16 SSBP4 (ENSPPAG00000041039) #17 ISYNA1 (ENSPPAG00000010473) #18 ELL (ENSPPAG00000029139) #19 FKBP8 (ENSPPAG00000012972) #20 ENSPPAG00000042675 #22 REX1BD (ENSPPAG00000043331) #23 ENSPPAG00000039468 #24 CRLF1 (ENSPPAG00000041635) #25 TMEM59L (ENSPPAG00000029514) #26 KLHL26 (ENSPPAG00000039902) #27 CRTC1 (ENSPPAG00000003288) #28 COMP (ENSPPAG00000040783) #29 UPF1 (ENSPPAG00000043884) #30 CERS1 (ENSPPAG00000036380) COPE (ENSPPAG00000020767) #31 DDX49 (ENSPPAG00000035217) #32 HOMER3 (ENSPPAG00000037113) #33 SUGP2 (ENSPPAG00000043787) #34 ARMC6 (ENSPPAG00000040716) #35 SLC25A42 (ENSPPAG00000036060) #36 Chimpanzee MODERN SPECIES 10 RAB3A (ENSPTRG00000010697) #8 PDE4C (ENSPTRG00000010699) #9 IQCN (ENSPTRG00000010700) #11 JUND (ENSPTRG00000042879) #12 LSM4 (ENSPTRG00000031470) #13 PGPEP1 (ENSPTRG00000010703) #14 GDF15 (ENSPTRG00000010707) #15 LRRC25 (ENSPTRG00000010708) #16 ENSPTRG00000052636 ##17 ISYNA1 (ENSPTRG00000010710) #18 ENSPTRG00000049787 #17 ENSPTRG00000046798 ENSPTRG00000045918 #18 ELL (ENSPTRG00000010711) #19 FKBP8 (ENSPTRG00000010712) #20 KXD1 (ENSPTRG00000010713) #22 REX1BD (ENSPTRG00000010715) #23 CRLF1 (ENSPTRG00000010716) #25 ENSPTRG00000044633 #24 TMEM59L (ENSPTRG00000010717) #26 KLHL26 (ENSPTRG00000010718) #27 CRTC1 (ENSPTRG00000010719) #28 COMP (ENSPTRG00000010720) #29 UPF1 (ENSPTRG00000010721) #30 GDF1 (ENSPTRG00000050095) CERS1 (ENSPTRG00000039869) COPE (ENSPTRG00000010723) #31 DDX49 (ENSPTRG00000010725) #32 HOMER3 (ENSPTRG00000010726) #33 SUGP2 (ENSPTRG00000010727) #34 ARMC6 (ENSPTRG00000010728) #35 Cercopithecidae ANCESTRAL SPECIES 17 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000157166 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Golden snub-nosed monkey MODERN SPECIES 2586 PIK3R2 (ENSRROG00000026877) IFI30 (ENSRROG00000034013) MPV17L2 (ENSRROG00000038653) #7 RAB3A (ENSRROG00000028696) #8 PDE4C (ENSRROG00000035958) #9 IQCN (ENSRROG00000043412) #11 LSM4 (ENSRROG00000045706) #13 PGPEP1 (ENSRROG00000040082) #14 GDF15 (ENSRROG00000031808) #15 LRRC25 (ENSRROG00000032505) #16 SSBP4 (ENSRROG00000037587) #17 ISYNA1 (ENSRROG00000041153) #18 ELL (ENSRROG00000042635) #19 FKBP8 (ENSRROG00000022396) #20 ENSRROG00000044752 UBA52 (ENSRROG00000033884) #22 REX1BD (ENSRROG00000030965) #23 CRLF1 (ENSRROG00000030939) #25 TMEM59L (ENSRROG00000024021) #26 KLHL26 (ENSRROG00000030821) #27 CRTC1 (ENSRROG00000039912) #28 COMP (ENSRROG00000043878) #29 UPF1 (ENSRROG00000040935) #30 GDF1 (ENSRROG00000041769) CERS1 (ENSRROG00000038529) COPE (ENSRROG00000032396) #31 DDX49 (ENSRROG00000032460) #32 HOMER3 (ENSRROG00000038822) #33 SUGP2 (ENSRROG00000029264) #34 ARMC6 (ENSRROG00000034739) #35 SLC25A42 (ENSRROG00000040352) #36 Black snub-nosed monkey MODERN SPECIES 621 PIK3R2 (ENSRBIG00000031224) IFI30 (ENSRBIG00000041792) MPV17L2 (ENSRBIG00000033280) #7 RAB3A (ENSRBIG00000029506) #8 PDE4C (ENSRBIG00000028744) #9 IQCN (ENSRBIG00000029845) #11 LSM4 (ENSRBIG00000024717) #13 PGPEP1 (ENSRBIG00000043819) #14 GDF15 (ENSRBIG00000038712) #15 LRRC25 (ENSRBIG00000036814) #16 SSBP4 (ENSRBIG00000022818) #17 ISYNA1 (ENSRBIG00000044096) #18 ELL (ENSRBIG00000041918) #19 FKBP8 (ENSRBIG00000038838) #20 ENSRBIG00000013976 UBA52 (ENSRBIG00000028020) #22 REX1BD (ENSRBIG00000039070) #23 CRLF1 (ENSRBIG00000036409) #25 TMEM59L (ENSRBIG00000030377) #26 TNRC6C (ENSRBIG00000027777) TMC6 (ENSRBIG00000035625) TMC8 (ENSRBIG00000030185) C17orf99 (ENSRBIG00000036244) ENSRBIG00000043138 TK1 (ENSRBIG00000004804) AFMID (ENSRBIG00000035765) BIRC5 (ENSRBIG00000037429) ENSRBIG00000029423 TMEM235 (ENSRBIG00000031997) PGS1 (ENSRBIG00000032209) DNAH17 (ENSRBIG00000044463) Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Vervet Monkey MODERN SPECIES 25 IFI30 (ENSCSAG00000005389) MPV17L2 (ENSCSAG00000005386) #7 RAB3A (ENSCSAG00000005381) #8 PDE4C (ENSCSAG00000005377) #9 ENSCSAG00000005372 #10 JUND (ENSCSAG00000018498) #12 LSM4 (ENSCSAG00000005370) #13 PGPEP1 (ENSCSAG00000005365) #14 GDF15 (ENSCSAG00000005364) #15 LRRC25 (ENSCSAG00000005359) #16 SSBP4 (ENSCSAG00000005355) #17 ISYNA1 (ENSCSAG00000005350) #18 ELL (ENSCSAG00000005345) #19 FKBP8 (ENSCSAG00000005342) #20 KXD1 (ENSCSAG00000005336) #21 UBA52 (ENSCSAG00000005332) #22 REX1BD (ENSCSAG00000005329) #23 CRLF1 (ENSCSAG00000005321) #25 TMEM59L (ENSCSAG00000005314) #26 KLHL26 (ENSCSAG00000005309) #27 CRTC1 (ENSCSAG00000005304) #28 COMP (ENSCSAG00000005292) #29 UPF1 (ENSCSAG00000005276) #30 GDF1 (ENSCSAG00000005273) CERS1 (ENSCSAG00000005267) COPE (ENSCSAG00000005262) #31 DDX49 (ENSCSAG00000005251) #32 HOMER3 (ENSCSAG00000005233) #33 SUGP2 (ENSCSAG00000005226) #34 ARMC6 (ENSCSAG00000005225) #35 SLC25A42 (ENSCSAG00000005223) #36 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Olive baboon MODERN SPECIES 12 IFI30 (ENSPANG00000034060) MPV17L2 (ENSPANG00000013957) #7 RAB3A (ENSPANG00000009376) #8 PDE4C (ENSPANG00000004911) #9 ENSPANG00000048218 #10 IQCN (ENSPANG00000015622) #11 LSM4 (ENSPANG00000014399) #13 PGPEP1 (ENSPANG00000013956) #14 GDF15 (ENSPANG00000015201) #15 LRRC25 (ENSPANG00000006961) #16 SSBP4 (ENSPANG00000008549) #17 ISYNA1 (ENSPANG00000004910) #18 ELL (ENSPANG00000015376) #19 FKBP8 (ENSPANG00000012120) #20 KXD1 (ENSPANG00000004389) #21 UBA52 (ENSPANG00000048839) #22 REX1BD (ENSPANG00000032734) #23 CRLF1 (ENSPANG00000011399) #25 TMEM59L (ENSPANG00000018010) #26 KLHL26 (ENSPANG00000023921) #27 CRTC1 (ENSPANG00000014162) #28 COMP (ENSPANG00000004388) #29 UPF1 (ENSPANG00000008847) #30 GDF1 (ENSPANG00000004387) CERS1 (ENSPANG00000005280) COPE (ENSPANG00000002532) #31 DDX49 (ENSPANG00000003161) #32 HOMER3 (ENSPANG00000004386) #33 SUGP2 (ENSPANG00000004442) #34 ARMC6 (ENSPANG00000002531) #35 SLC25A42 (ENSPANG00000004441) #36 Cercopithecinae_d ANCESTRAL SPECIES 8 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Sooty mangabey MODERN SPECIES 347 PIK3R2 (ENSCATG00000035498) IFI30 (ENSCATG00000030819) MPV17L2 (ENSCATG00000036815) #7 RAB3A (ENSCATG00000042078) #8 PDE4C (ENSCATG00000021874) #9 IQCN (ENSCATG00000029221) #11 JUND (ENSCATG00000041206) #12 LSM4 (ENSCATG00000029311) #13 PGPEP1 (ENSCATG00000033807) #14 GDF15 (ENSCATG00000042827) #15 LRRC25 (ENSCATG00000038001) #16 SSBP4 (ENSCATG00000028212) #17 ISYNA1 (ENSCATG00000029593) #18 ELL (ENSCATG00000017360) #19 FKBP8 (ENSCATG00000034787) #20 UBA52 (ENSCATG00000032279) #22 REX1BD (ENSCATG00000032246) #23 CRLF1 (ENSCATG00000031612) #25 TMEM59L (ENSCATG00000031976) #26 KLHL26 (ENSCATG00000040338) #27 CRTC1 (ENSCATG00000037923) #28 COMP (ENSCATG00000021027) #29 ENSCATG00000029785 UPF1 (ENSCATG00000040306) #30 GDF1 (ENSCATG00000033208) CERS1 (ENSCATG00000033850) COPE (ENSCATG00000038467) #31 DDX49 (ENSCATG00000032577) #32 HOMER3 (ENSCATG00000036483) #33 SUGP2 (ENSCATG00000029755) #34 ARMC6 (ENSCATG00000032065) #35 Drill MODERN SPECIES 160 MAST3 (ENSMLEG00000038024) PIK3R2 (ENSMLEG00000006536) IFI30 (ENSMLEG00000042593) MPV17L2 (ENSMLEG00000028030) #7 RAB3A (ENSMLEG00000040567) #8 PDE4C (ENSMLEG00000043449) #9 IQCN (ENSMLEG00000031635) #11 LSM4 (ENSMLEG00000027948) #13 PGPEP1 (ENSMLEG00000041283) #14 GDF15 (ENSMLEG00000043577) #15 LRRC25 (ENSMLEG00000023417) #16 SSBP4 (ENSMLEG00000024111) #17 ISYNA1 (ENSMLEG00000033928) #18 ELL (ENSMLEG00000023490) #19 FKBP8 (ENSMLEG00000029078) #20 UBA52 (ENSMLEG00000038811) #22 REX1BD (ENSMLEG00000041099) #23 CRLF1 (ENSMLEG00000041126) #25 TMEM59L (ENSMLEG00000032687) #26 KLHL26 (ENSMLEG00000038620) #27 CRTC1 (ENSMLEG00000044311) #28 COMP (ENSMLEG00000028753) #29 UPF1 (ENSMLEG00000028404) #30 CERS1 (ENSMLEG00000020659) COPE (ENSMLEG00000042923) #31 DDX49 (ENSMLEG00000042550) #32 HOMER3 (ENSMLEG00000042234) #33 SUGP2 (ENSMLEG00000036719) #34 ARMC6 (ENSMLEG00000039585) #35 SLC25A42 (ENSMLEG00000038599) #36 TMEM161A (ENSMLEG00000041570) #37 Macaca ANCESTRAL SPECIES 21 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Pig-tailed macaque MODERN SPECIES 76 MAST3 (ENSMNEG00000038739) PIK3R2 (ENSMNEG00000028516) IFI30 (ENSMNEG00000031440) MPV17L2 (ENSMNEG00000034679) #7 RAB3A (ENSMNEG00000030363) #8 PDE4C (ENSMNEG00000018173) #9 IQCN (ENSMNEG00000031188) #11 LSM4 (ENSMNEG00000042899) #13 PGPEP1 (ENSMNEG00000036180) #14 GDF15 (ENSMNEG00000012923) #15 LRRC25 (ENSMNEG00000040071) #16 SSBP4 (ENSMNEG00000033173) #17 ISYNA1 (ENSMNEG00000044547) #18 ELL (ENSMNEG00000044645) #19 FKBP8 (ENSMNEG00000031077) #20 UBA52 (ENSMNEG00000032643) #22 REX1BD (ENSMNEG00000045352) #23 CRLF1 (ENSMNEG00000033002) #25 TMEM59L (ENSMNEG00000044854) #26 KLHL26 (ENSMNEG00000045346) #27 CRTC1 (ENSMNEG00000021530) #28 COMP (ENSMNEG00000037024) #29 UPF1 (ENSMNEG00000000046) #30 GDF1 (ENSMNEG00000041111) COPE (ENSMNEG00000031787) #31 DDX49 (ENSMNEG00000029654) #32 HOMER3 (ENSMNEG00000042042) #33 SUGP2 (ENSMNEG00000043062) #34 ARMC6 (ENSMNEG00000043051) #35 ENSMNEG00000030397 SLC25A42 (ENSMNEG00000043911) #36 Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT01100000263539.b.b.a.b.b.b.b.a ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT01100000263577.a.a.b.b.a.a.a.b.a.a.a.a ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.g #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT01100000263493.a.a.a.b.a.a.b.a.a.a.b ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Rhesus MODERN SPECIES 10 PDE4C (ENSMMUG00000005028) #9 ENSMMUG00000065139 #10 IQCN (ENSMMUG00000016354) #11 JUND (ENSMMUG00000038371) #12 ENSMMUG00000050519 LSM4 (ENSMMUG00000004405) #13 PGPEP1 (ENSMMUG00000004406) #14 ENSMMUG00000059530 GDF15 (ENSMMUG00000050122) #15 LRRC25 (ENSMMUG00000021181) #16 SSBP4 (ENSMMUG00000021182) #17 ISYNA1 (ENSMMUG00000021183) #18 ELL (ENSMMUG00000013671) #19 FKBP8 (ENSMMUG00000009587) #20 KXD1 (ENSMMUG00000016085) #21 UBA52 (ENSMMUG00000064485) #22 ENSMMUG00000054512 TMEM59L (ENSMMUG00000009988) #26 CRLF1 (ENSMMUG00000060102) #25 KLHL26 (ENSMMUG00000064204) #27 CRTC1 (ENSMMUG00000006509) #28 COMP (ENSMMUG00000006511) #29 ENSMMUG00000056644 UPF1 (ENSMMUG00000023286) #30 GDF1 (ENSMMUG00000023290) CERS1 (ENSMMUG00000059247) COPE (ENSMMUG00000023291) #31 DDX49 (ENSMMUG00000023293) #32 HOMER3 (ENSMMUG00000023294) #33 SUGP2 (ENSMMUG00000019665) #34 ARMC6 (ENSMMUG00000019668) #35 Crab-eating macaque MODERN SPECIES 10 MPV17L2 (ENSMFAG00000041586) #7 PDE4C (ENSMFAG00000041375) #9 ENSMFAG00000049148 #10 IQCN (ENSMFAG00000042967) #11 ENSMFAG00000049018 LSM4 (ENSMFAG00000031194) #13 PGPEP1 (ENSMFAG00000009200) #14 ENSMFAG00000063416 GDF15 (ENSMFAG00000050470) #15 LRRC25 (ENSMFAG00000034355) #16 SSBP4 (ENSMFAG00000041433) #17 ISYNA1 (ENSMFAG00000044263) #18 ELL (ENSMFAG00000044774) #19 FKBP8 (ENSMFAG00000034676) #20 KXD1 (ENSMFAG00000044925) #21 UBA52 (ENSMFAG00000049103) #22 REX1BD (ENSMFAG00000044115) #23 CRLF1 (ENSMFAG00000001307) #25 ENSMFAG00000045477 #26 ENSMFAG00000044055 #27 KLHL26 (ENSMFAG00000062634) #27 CRTC1 (ENSMFAG00000045375) #28 ENSMFAG00000004008 #29 ENSMFAG00000052968 ENSMFAG00000037748 #30 ENSMFAG00000065281 #30 CERS1 (ENSMFAG00000044990) GDF1 (ENSMFAG00000064570) COPE (ENSMFAG00000038870) #31 DDX49 (ENSMFAG00000044697) #32 HOMER3 (ENSMFAG00000031509) #33 Strepsirrhini ANCESTRAL SPECIES 33 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Bushbaby MODERN SPECIES 220 RAB3A (ENSOGAG00000010208) #8 PDE4C (ENSOGAG00000014301) #9 IQCN (ENSOGAG00000033156) #11 JUND (ENSOGAG00000025346) #12 LSM4 (ENSOGAG00000027992) #13 PGPEP1 (ENSOGAG00000014833) #14 ENSOGAG00000033959 GDF15 (ENSOGAG00000028283) #15 LRRC25 (ENSOGAG00000007429) #16 SSBP4 (ENSOGAG00000007430) #17 ISYNA1 (ENSOGAG00000007433) #18 ENSOGAG00000007437 #19 ENSOGAG00000030550 #19 FKBP8 (ENSOGAG00000007440) #20 KXD1 (ENSOGAG00000007523) #21 UBA52 (ENSOGAG00000028000) #22 REX1BD (ENSOGAG00000033304) #23 CRLF1 (ENSOGAG00000004920) #25 TMEM59L (ENSOGAG00000004923) #26 KLHL26 (ENSOGAG00000004926) #27 CRTC1 (ENSOGAG00000004927) #28 COMP (ENSOGAG00000004930) #29 UPF1 (ENSOGAG00000012866) #30 GDF1 (ENSOGAG00000012872) CERS1 (ENSOGAG00000033679) COPE (ENSOGAG00000031639) #31 DDX49 (ENSOGAG00000008259) #32 HOMER3 (ENSOGAG00000008261) #33 SUGP2 (ENSOGAG00000024068) #34 ARMC6 (ENSOGAG00000007536) #35 SLC25A42 (ENSOGAG00000007251) #36 Lemuriformes ANCESTRAL SPECIES 45 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Mouse lemur MODERN SPECIES 16 ARRDC2 (ENSMICG00000048039) MAST3 (ENSMICG00000034292) PIK3R2 (ENSMICG00000028339) MPV17L2 (ENSMICG00000044224) #7 RAB3A (ENSMICG00000047037) #8 PDE4C (ENSMICG00000037741) #9 IQCN (ENSMICG00000044860) #11 ENSMICG00000032841 #12 LSM4 (ENSMICG00000000222) #13 ENSMICG00000043044 ENSMICG00000034758 #17 ISYNA1 (ENSMICG00000017023) #18 ELL (ENSMICG00000017036) #19 ENSMICG00000046500 #20 KXD1 (ENSMICG00000045924) #21 UBA52 (ENSMICG00000047956) #22 REX1BD (ENSMICG00000038301) #23 CRLF1 (ENSMICG00000028147) #25 TMEM59L (ENSMICG00000010461) #26 KLHL26 (ENSMICG00000045410) #27 CRTC1 (ENSMICG00000000711) #28 COMP (ENSMICG00000028923) #29 UPF1 (ENSMICG00000001659) #30 GDF1 (ENSMICG00000031178) Lemuriformes_a ANCESTRAL SPECIES 65 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Greater bamboo lemur MODERN SPECIES 392 IFI30 (ENSPSMG00000025464) MPV17L2 (ENSPSMG00000025466) #7 RAB3A (ENSPSMG00000025469) #8 PDE4C (ENSPSMG00000025493) #9 IQCN (ENSPSMG00000000071) #11 JUND (ENSPSMG00000000089) #12 LSM4 (ENSPSMG00000000120) #13 PGPEP1 (ENSPSMG00000000175) #14 GDF15 (ENSPSMG00000000181) #15 LRRC25 (ENSPSMG00000000196) #16 SSBP4 (ENSPSMG00000000331) #17 ISYNA1 (ENSPSMG00000000412) #18 ELL (ENSPSMG00000000458) #19 FKBP8 (ENSPSMG00000000488) #20 KXD1 (ENSPSMG00000000536) #21 UBA52 (ENSPSMG00000000564) #22 REX1BD (ENSPSMG00000000580) #23 CRLF1 (ENSPSMG00000000604) #25 TMEM59L (ENSPSMG00000000639) #26 KLHL26 (ENSPSMG00000000655) #27 CRTC1 (ENSPSMG00000000672) #28 COMP (ENSPSMG00000000819) #29 UPF1 (ENSPSMG00000001054) #30 GDF1 (ENSPSMG00000001150) CERS1 (ENSPSMG00000001173) COPE (ENSPSMG00000001405) #31 DDX49 (ENSPSMG00000001520) #32 HOMER3 (ENSPSMG00000001606) #33 SUGP2 (ENSPSMG00000001742) #34 ARMC6 (ENSPSMG00000001861) #35 SLC25A42 (ENSPSMG00000001893) #36 Atlantogenata ANCESTRAL SPECIES 42 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 ENSGT00390000000672.a.a #37 Afrotheria ANCESTRAL SPECIES 45 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 ENSGT00390000000672.a.a #37 Afrotheria_a ANCESTRAL SPECIES 44 ENSGT00940000157166 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 ENSGT00390000000672.a.a #37 Elephant MODERN SPECIES 270 MAST3 (ENSLAFG00000026363) PIK3R2 (ENSLAFG00000000711) IFI30 (ENSLAFG00000013615) MPV17L2 (ENSLAFG00000029124) #7 RAB3A (ENSLAFG00000013618) #8 PDE4C (ENSLAFG00000013627) #9 ENSLAFG00000021534 #11 LSM4 (ENSLAFG00000017459) #13 PGPEP1 (ENSLAFG00000029224) #14 ENSLAFG00000028458 #15 ENSLAFG00000025978 #16 SSBP4 (ENSLAFG00000029510) #17 ISYNA1 (ENSLAFG00000004178) #18 ELL (ENSLAFG00000028366) #19 FKBP8 (ENSLAFG00000008984) #20 UBA52 (ENSLAFG00000008353) #22 REX1BD (ENSLAFG00000008356) #23 TMEM59L (ENSLAFG00000015467) #26 KLHL26 (ENSLAFG00000003041) #27 CRTC1 (ENSLAFG00000003043) #28 COMP (ENSLAFG00000010855) #29 UPF1 (ENSLAFG00000014963) #30 GDF1 (ENSLAFG00000027424) COPE (ENSLAFG00000002932) #31 DDX49 (ENSLAFG00000002934) #32 HOMER3 (ENSLAFG00000002936) #33 CRLF1 (ENSLAFG00000008358) #25 SUGP2 (ENSLAFG00000018646) #34 ARMC6 (ENSLAFG00000021876) #35 SLC25A42 (ENSLAFG00000003608) #36 TMEM161A (ENSLAFG00000012976) #37 Tenrec MODERN SPECIES 17468 KXD1 (ENSETEG00000003390) #21 UBA52 (ENSETEG00000003392) #22 Marsupialia ANCESTRAL SPECIES 25 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Opossum MODERN SPECIES 2 ENSMODG00000023781 ENSMODG00000047419 ENSMODG00000003178 ENSMODG00000003136 MPV17L2 (ENSMODG00000003199) #7 RAB3A (ENSMODG00000003214) #8 ENSMODG00000044863 #9 ENSMODG00000003263 ENSMODG00000029612 #11 PGPEP1 (ENSMODG00000044087) #14 ENSMODG00000023947 #15 ELL (ENSMODG00000003470) #19 ENSMODG00000003473 FKBP8 (ENSMODG00000003483) #20 ENSMODG00000003489 #21 UBA52 (ENSMODG00000003499) #22 CRLF1 (ENSMODG00000003510) #25 ENSMODG00000003550 #26 KLHL26 (ENSMODG00000003568) #27 CRTC1 (ENSMODG00000003607) #28 COMP (ENSMODG00000003651) #29 UPF1 (ENSMODG00000003689) #30 GDF1 (ENSMODG00000049198) CERS1 (ENSMODG00000023939) COPE (ENSMODG00000003729) #31 DDX49 (ENSMODG00000003745) #32 HOMER3 (ENSMODG00000003771) #33 ENSMODG00000043314 SUGP2 (ENSMODG00000003992) #34 ARMC6 (ENSMODG00000004028) #35 SLC25A42 (ENSMODG00000045593) #36 Marsupialia_b ANCESTRAL SPECIES 24 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Diprotodontia ANCESTRAL SPECIES 54 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b ##22 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Diprotodontia_a ANCESTRAL SPECIES 53 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Common wonbat MODERN SPECIES 626 MAST3 (ENSVURG00010014870) PIK3R2 (ENSVURG00010014929) ENSVURG00010014942 #7 RAB3A (ENSVURG00010014950) #8 PDE4C (ENSVURG00010014959) #9 ENSVURG00010014977 #11 JUND (ENSVURG00010014985) #12 LSM4 (ENSVURG00010014994) #13 PGPEP1 (ENSVURG00010015000) #14 ENSVURG00010015005 #15 SSBP4 (ENSVURG00010015019) #17 ISYNA1 (ENSVURG00010015054) #18 ELL (ENSVURG00010015067) #19 FKBP8 (ENSVURG00010015095) #20 KXD1 (ENSVURG00010015106) #21 UBA52 (ENSVURG00010015122) #22 ENSVURG00010015181 CRLF1 (ENSVURG00010015189) #25 ENSVURG00010015204 #26 KLHL26 (ENSVURG00010015213) #27 UPF1 (ENSVURG00010015221) #30 ENSVURG00010015230 CERS1 (ENSVURG00010015235) COPE (ENSVURG00010015238) #31 DDX49 (ENSVURG00010015248) #32 HOMER3 (ENSVURG00010015278) #33 SUGP2 (ENSVURG00010015311) #34 ARMC6 (ENSVURG00010015325) #35 SLC25A42 (ENSVURG00010015339) #36 TMEM161A (ENSVURG00010015346) #37 MEF2B (ENSVURG00010015357) Tasmanian devil MODERN SPECIES PIK3R2 (ENSSHAG00000009738) ENSSHAG00000022120 MPV17L2 (ENSSHAG00000009989) #7 RAB3A (ENSSHAG00000010227) #8 PDE4C (ENSSHAG00000010359) #9 ENSSHAG00000028095 #11 JUND (ENSSHAG00000021787) #12 LSM4 (ENSSHAG00000021542) #13 PGPEP1 (ENSSHAG00000031355) #14 ENSSHAG00000027753 #15 ENSSHAG00000023181 #15 SSBP4 (ENSSHAG00000002793) #17 ISYNA1 (ENSSHAG00000003750) #18 FKBP8 (ENSSHAG00000006428) #20 KXD1 (ENSSHAG00000006949) #21 UBA52 (ENSSHAG00000021283) #22 ENSSHAG00000007133 CRLF1 (ENSSHAG00000007192) #25 ENSSHAG00000024929 #26 KLHL26 (ENSSHAG00000008083) #27 CRTC1 (ENSSHAG00000009155) #28 COMP (ENSSHAG00000009531) #29 UPF1 (ENSSHAG00000010499) #30 CERS1 (ENSSHAG00000010705) ENSSHAG00000030192 COPE (ENSSHAG00000010821) #31 DDX49 (ENSSHAG00000010982) #32 HOMER3 (ENSSHAG00000011091) #33 ENSSHAG00000011270 ARMC6 (ENSSHAG00000011840) #35 SUGP2 (ENSSHAG00000011705) #34 Platypus MODERN SPECIES 84 MPV17L2 (ENSOANG00000043847) #7 RAB3A (ENSOANG00000008654) #8 ENSOANG00000049171 ENSOANG00000039923 #12 LSM4 (ENSOANG00000007434) #13 PGPEP1 (ENSOANG00000009849) #14 ENSOANG00000049928 #16 ENSOANG00000046356 ENSOANG00000001923 #15 ENSOANG00000036012 #16 SSBP4 (ENSOANG00000046676) #17 ISYNA1 (ENSOANG00000031278) #18 ELL (ENSOANG00000031962) #19 FKBP8 (ENSOANG00000042600) #20 KXD1 (ENSOANG00000038897) #21 UBA52 (ENSOANG00000005752) #22 ENSOANG00000047121 CRLF1 (ENSOANG00000036818) #25 ENSOANG00000045153 #26 KLHL26 (ENSOANG00000005746) #27 CRTC1 (ENSOANG00000041674) #28 COMP (ENSOANG00000002729) #29 ENSOANG00000004568 #30 ENSOANG00000004569 CERS1 (ENSOANG00000004570) COPE (ENSOANG00000004571) #31 ENSOANG00000044420 #32 ENSOANG00000004573 ENSOANG00000043871 SUGP2 (ENSOANG00000004574) #34 ARMC6 (ENSOANG00000045954) #35 Sauria ANCESTRAL SPECIES 20 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Lepidosauria ANCESTRAL SPECIES 35 ENSGT00390000010974 ENSGT00940000160620.db #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081.m.a #33 ENSGT00940000167763 ENSGT00940000158081.m.b #33 ENSGT00410000025695.b #34 tuatara MODERN SPECIES 1565 INSR (ENSSPUG00000009734) USE1 (ENSSPUG00000009768) MYO9B (ENSSPUG00000009847) HAUS8 (ENSSPUG00000010057) MPV17L2 (ENSSPUG00000010086) #7 ENSSPUG00000010099 #8 ENSSPUG00000010116 LSM4 (ENSSPUG00000010166) #13 PGPEP1 (ENSSPUG00000010192) #14 ENSSPUG00000010198 #16 SSBP4 (ENSSPUG00000010206) #17 ISYNA1 (ENSSPUG00000010254) #18 ELL (ENSSPUG00000010266) #19 FKBP8 (ENSSPUG00000010283) #20 KXD1 (ENSSPUG00000010296) #21 UBA52 (ENSSPUG00000010306) #22 ENSSPUG00000010329 CRLF1 (ENSSPUG00000010342) #25 TMEM59L (ENSSPUG00000010363) #26 KLHL26 (ENSSPUG00000010387) #27 CRTC1 (ENSSPUG00000010424) #28 UPF1 (ENSSPUG00000010538) #30 ENSSPUG00000010588 CERS1 (ENSSPUG00000010617) COPE (ENSSPUG00000010666) #31 DDX49 (ENSSPUG00000010688) #32 ENSSPUG00000010703 #33 HOMER3 (ENSSPUG00000010716) #33 ENSSPUG00000010736 #34 ENSSPUG00000010778 #34 ARMC6 (ENSSPUG00000010822) #35 Episquamata ANCESTRAL SPECIES 18 ENSGT00940000165071 ENSGT00390000001700.b ENSGT00390000006565 ENSGT00390000018061 ENSGT00940000156757 ENSGT00390000000475 ENSGT00530000063749.c.a ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000007991 ENSGT00950000185298 ENSGT00940000159258 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081.m.a #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Toxicofera ANCESTRAL SPECIES 6 ENSGT00940000165071 ENSGT00390000001700.b ENSGT00390000006565 ENSGT00390000018061 ENSGT00940000156757 ENSGT00390000000475 ENSGT00530000063749.c.a ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000007991 ENSGT00950000185298 ENSGT00940000159258 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00950000182919.B.b ENSGT00940000159696 ENSGT00940000156640 ENSGT00940000156354 ENSGT00510000046704.b.a ENSGT00390000003122 ENSGT00940000158176 ENSGT00940000158270 ENSGT00990000203589.b.b Elapidae ANCESTRAL SPECIES 7 ENSGT00940000165071 ENSGT00390000001700.b ENSGT00390000006565 ENSGT00390000018061 ENSGT00940000156757 ENSGT00390000000475 ENSGT00530000063749.c.a ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201 ENSGT00390000007991 ENSGT00950000185298 ENSGT00940000159258 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00950000182919.B.b ENSGT00940000159696 ENSGT00940000156640 ENSGT00940000156354 ENSGT00510000046704.b.a ENSGT00390000003122 ENSGT00940000158176 ENSGT00940000158270 ENSGT00990000203589.b.b Indian cobra MODERN SPECIES EFNA2 (ENSNNAG00000002311) ENSNNAG00000002306 ENSNNAG00000002293 ENSNNAG00000002272 NDUFS7 (ENSNNAG00000002258) GAMT (ENSNNAG00000002247) DAZAP1 (ENSNNAG00000002212) RPS15 (ENSNNAG00000002192) APC2 (ENSNNAG00000002159) TJP3 (ENSNNAG00000002143) APBA3 (ENSNNAG00000002127) MRPL54 (ENSNNAG00000002107) PIP5K1C (ENSNNAG00000002076) ENSNNAG00000002062 FSTL3 (ENSNNAG00000002051) UBA52 (ENSNNAG00000002039) #22 ENSNNAG00000002033 CRLF1 (ENSNNAG00000002027) #25 TMEM59L (ENSNNAG00000002015) #26 ENSNNAG00000002004 #27 ENSNNAG00000001998 #27 ENSNNAG00000001994 CRTC1 (ENSNNAG00000001982) #28 ENSNNAG00000001970 UPF1 (ENSNNAG00000001946) #30 ENSNNAG00000001932 CERS1 (ENSNNAG00000001921) COPE (ENSNNAG00000001905) #31 DDX49 (ENSNNAG00000001874) #32 HOMER3 (ENSNNAG00000001848) #33 ENSNNAG00000001830 Elapidae_a ANCESTRAL SPECIES 9 ENSGT00940000165071 ENSGT00390000001700.b ENSGT00390000006565 ENSGT00390000018061 ENSGT00940000156757 ENSGT00390000000475 ENSGT00530000063749.c.a ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201.o ENSGT00390000007991 ENSGT00950000185298 ENSGT00940000159258 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT01030000234623.a.b.a.d ENSGT00940000155227 ENSGT00950000182919.B.b ENSGT00940000159696 ENSGT00940000156640 ENSGT00940000156354 ENSGT00510000046704.b.a ENSGT00390000003122 ENSGT00940000158176 ENSGT00940000158270 Acanthophiinae ANCESTRAL SPECIES 9 ENSGT00390000001700.b ENSGT00390000006565 ENSGT00390000018061 ENSGT00940000156757 ENSGT00390000000475 ENSGT00530000063749.c.a ENSGT00940000160036 ENSGT00940000160384 ENSGT00390000001201.o ENSGT00390000001201.p ENSGT00390000007991 ENSGT00950000185298 ENSGT00940000159258 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT01030000234623.a.b.a.d ENSGT00940000155227 ENSGT00950000182919.B.b ENSGT00940000159696 ENSGT00940000156640 ENSGT00940000156354 ENSGT00510000046704.b.a ENSGT00390000003122 ENSGT00940000158176 ENSGT00940000158270 Eastern brown snake MODERN SPECIES 10 ENSPTXG00000002698 ENSPTXG00000002697 ENSPTXG00000002696 NDUFS7 (ENSPTXG00000002642) GAMT (ENSPTXG00000002632) DAZAP1 (ENSPTXG00000002624) RPS15 (ENSPTXG00000002620) APC2 (ENSPTXG00000002613) TJP3 (ENSPTXG00000002596) APBA3 (ENSPTXG00000002593) MRPL54 (ENSPTXG00000002590) C19orf25 (ENSPTXG00000002589) ENSPTXG00000002583 PRSS57 (ENSPTXG00000002581) FSTL3 (ENSPTXG00000002400) UBA52 (ENSPTXG00000002396) #22 ENSPTXG00000002395 CRLF1 (ENSPTXG00000002393) #25 TMEM59L (ENSPTXG00000002392) #26 KLHL26 (ENSPTXG00000002391) #27 CRTC1 (ENSPTXG00000002389) #28 THBS4 (ENSPTXG00000002388) UPF1 (ENSPTXG00000002385) #30 ENSPTXG00000002384 CERS1 (ENSPTXG00000002381) COPE (ENSPTXG00000002378) #31 DDX49 (ENSPTXG00000002377) #32 ENSPTXG00000002375 #33 ENSPTXG00000002373 #33 ENSPTXG00000002371 SUGP2 (ENSPTXG00000002368) #34 Mainland tiger snake MODERN SPECIES 372 APC2 (ENSNSUG00000011723) APBA3 (ENSNSUG00000011720) ENSNSUG00000011717 C19orf25 (ENSNSUG00000011716) ENSNSUG00000011715 ENSNSUG00000011711 ENSNSUG00000011710 FSTL3 (ENSNSUG00000011704) UBA52 (ENSNSUG00000011703) #22 CRLF1 (ENSNSUG00000011702) #25 Laterata ANCESTRAL SPECIES 54 ENSGT00390000007991 ENSGT00390000001201 ENSGT00940000159258 ENSGT00940000162457 ENSGT00940000161332 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b.c #27 ENSGT00940000159238.b.d.a #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00390000007336 ENSGT00510000049316 ENSGT00390000016934 ENSGT00530000063974.a ENSGT00940000160748 ENSGT00940000165052 ENSGT00950000182904.a.b.b ENSGT00390000012482 Common wall lizard MODERN SPECIES 9 FGF22 (ENSPMRG00000020360) RNF126 (ENSPMRG00000020338) ARID3A (ENSPMRG00000020321) ENSPMRG00000020315 SCAMP4 (ENSPMRG00000020310) ENSPMRG00000020302 #26 CRLF1 (ENSPMRG00000020295) #25 ENSPMRG00000020291 MRPL54 (ENSPMRG00000020285) ENSPMRG00000020279 ENSPMRG00000020271 PIP5K1C (ENSPMRG00000020183) PRSS57 (ENSPMRG00000020145) ENSPMRG00000020135 FSTL3 (ENSPMRG00000020126) UBA52 (ENSPMRG00000020120) #22 APBA3 (ENSPMRG00000020087) TJP3 (ENSPMRG00000020039) APC2 (ENSPMRG00000020018) ENSPMRG00000020007 DAZAP1 (ENSPMRG00000019995) GAMT (ENSPMRG00000019991) NDUFS7 (ENSPMRG00000019989) ENSPMRG00000019980 ENSPMRG00000019972 ENSPMRG00000019966 EFNA2 (ENSPMRG00000019964) MIDN (ENSPMRG00000019959) CIRBP (ENSPMRG00000019955) CBARP (ENSPMRG00000019948) ENSPMRG00000019944 Argentine black and white tegu MODERN SPECIES 176 ENSSMRG00000008127 MRPL54 (ENSSMRG00000008122) PIP5K1C (ENSSMRG00000008047) PRSS57 (ENSSMRG00000008042) FSTL3 (ENSSMRG00000008041) UBA52 (ENSSMRG00000008040) #22 CRLF1 (ENSSMRG00000008038) #25 TMEM59L (ENSSMRG00000008036) #26 KLHL26 (ENSSMRG00000008035) #27 CRTC1 (ENSSMRG00000008029) #28 THBS4 (ENSSMRG00000008021) ABHD8 (ENSSMRG00000008018) ENSSMRG00000008017 BABAM1 (ENSSMRG00000008014) NR2F6 (ENSSMRG00000008012) ENSSMRG00000008011 ENSSMRG00000008007 KCNN1 (ENSSMRG00000007072) CCDC124 (ENSSMRG00000007047) SLC5A5 (ENSSMRG00000007019) B3GNT3 (ENSSMRG00000007014) Archelosauria ANCESTRAL SPECIES 20 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Cryptodira ANCESTRAL SPECIES 19 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT01030000238185 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Chinese turtle MODERN SPECIES 1790 LSM4 (ENSPSIG00000012358) #13 PGPEP1 (ENSPSIG00000012192) #14 SSBP4 (ENSPSIG00000012047) #17 ELL (ENSPSIG00000011611) #19 FKBP8 (ENSPSIG00000011511) #20 KXD1 (ENSPSIG00000011318) #21 UBA52 (ENSPSIG00000011198) #22 CRLF1 (ENSPSIG00000011140) #25 TMEM59L (ENSPSIG00000010763) #26 KLHL26 (ENSPSIG00000010574) #27 CRTC1 (ENSPSIG00000010543) #28 ENSPSIG00000009643 UPF1 (ENSPSIG00000009491) #30 ENSPSIG00000009471 CERS1 (ENSPSIG00000009415) COPE (ENSPSIG00000009381) #31 DDX49 (ENSPSIG00000008625) #32 HOMER3 (ENSPSIG00000008524) #33 ENSPSIG00000008490 SUGP2 (ENSPSIG00000008256) #34 ARMC6 (ENSPSIG00000008070) #35 SLC25A42 (ENSPSIG00000007452) #36 Testudinoidea ANCESTRAL SPECIES 18 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Testudinidae ANCESTRAL SPECIES 20 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000155674 ENSGT01030000234840 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Goode s thornscrub tortoise MODERN SPECIES 14 MPV17L2 (ENSGEVG00005018840) #7 ENSGEVG00005018855 RAB3A (ENSGEVG00005018864) #8 ENSGEVG00005018960 JUND (ENSGEVG00005019215) #12 LSM4 (ENSGEVG00005019224) #13 PGPEP1 (ENSGEVG00005019233) #14 ENSGEVG00005019242 #15 ENSGEVG00005019252 SSBP4 (ENSGEVG00005019269) #17 ISYNA1 (ENSGEVG00005019284) #18 ELL (ENSGEVG00005019294) #19 ENSGEVG00005019301 FKBP8 (ENSGEVG00005019307) #20 KXD1 (ENSGEVG00005019317) #21 UBA52 (ENSGEVG00005019323) #22 ENSGEVG00005019334 CRLF1 (ENSGEVG00005019342) #25 TMEM59L (ENSGEVG00005019360) #26 KLHL26 (ENSGEVG00005019386) #27 CRTC1 (ENSGEVG00005019397) #28 THBS4 (ENSGEVG00005019413) UPF1 (ENSGEVG00005019427) #30 ENSGEVG00005004318 CERS1 (ENSGEVG00005004366) COPE (ENSGEVG00005004472) #31 DDX49 (ENSGEVG00005004539) #32 HOMER3 (ENSGEVG00005004624) #33 ENSGEVG00005004681 SUGP2 (ENSGEVG00005004782) #34 ARMC6 (ENSGEVG00005004824) #35 Abingdon island giant tortoise MODERN SPECIES 897 PIK3R2 (ENSCABG00000016368) IFI30 (ENSCABG00000016346) MPV17L2 (ENSCABG00000016336) #7 RAB3A (ENSCABG00000016331) #8 ENSCABG00000016323 ENSCABG00000016321 LSM4 (ENSCABG00000016318) #13 PGPEP1 (ENSCABG00000016317) #14 ENSCABG00000016315 #15 ENSCABG00000016313 SSBP4 (ENSCABG00000016310) #17 ISYNA1 (ENSCABG00000016309) #18 ELL (ENSCABG00000016281) #19 FKBP8 (ENSCABG00000016277) #20 KXD1 (ENSCABG00000016274) #21 UBA52 (ENSCABG00000016273) #22 ENSCABG00000016271 CRLF1 (ENSCABG00000016270) #25 TMEM59L (ENSCABG00000016267) #26 KLHL26 (ENSCABG00000016263) #27 CRTC1 (ENSCABG00000016260) #28 ENSCABG00000016259 UPF1 (ENSCABG00000016111) #30 ENSCABG00000016109 CERS1 (ENSCABG00000016108) COPE (ENSCABG00000016084) #31 DDX49 (ENSCABG00000016075) #32 HOMER3 (ENSCABG00000016067) #33 ENSCABG00000016063 SUGP2 (ENSCABG00000016062) #34 ARMC6 (ENSCABG00000016061) #35 Emydidae ANCESTRAL SPECIES 14 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Three-toed box turtle MODERN SPECIES 92 IFI30 (ENSTMTG00000012174) MPV17L2 (ENSTMTG00000012198) #7 RAB3A (ENSTMTG00000012226) #8 ENSTMTG00000012246 ENSTMTG00000012309 ENSTMTG00000012321 JUND (ENSTMTG00000012359) #12 LSM4 (ENSTMTG00000012412) #13 ENSTMTG00000012426 ENSTMTG00000012432 #15 ENSTMTG00000012439 ENSTMTG00000012456 ##17 ELL (ENSTMTG00000012487) #19 FKBP8 (ENSTMTG00000012525) #20 KXD1 (ENSTMTG00000012547) #21 UBA52 (ENSTMTG00000012556) #22 ENSTMTG00000012572 CRLF1 (ENSTMTG00000012585) #25 TMEM59L (ENSTMTG00000012614) #26 KLHL26 (ENSTMTG00000012633) #27 CRTC1 (ENSTMTG00000012645) #28 ENSTMTG00000012670 UPF1 (ENSTMTG00000012695) #30 ENSTMTG00000012739 CERS1 (ENSTMTG00000012752) COPE (ENSTMTG00000012775) #31 DDX49 (ENSTMTG00000012790) #32 HOMER3 (ENSTMTG00000012853) #33 ENSTMTG00000012889 SUGP2 (ENSTMTG00000012920) #34 ARMC6 (ENSTMTG00000012947) #35 painted turtle MODERN SPECIES 771 IFI30 (ENSCPBG00000012937) MPV17L2 (ENSCPBG00000012933) #7 RAB3A (ENSCPBG00000012930) #8 ENSCPBG00000012929 ENSCPBG00000012928 ENSCPBG00000012926 LSM4 (ENSCPBG00000012925) #13 PGPEP1 (ENSCPBG00000012924) #14 ENSCPBG00000012922 #15 ENSCPBG00000012920 SSBP4 (ENSCPBG00000012919) #17 ISYNA1 (ENSCPBG00000012918) #18 ELL (ENSCPBG00000012916) #19 FKBP8 (ENSCPBG00000012915) #20 KXD1 (ENSCPBG00000012914) #21 UBA52 (ENSCPBG00000012913) #22 ENSCPBG00000012912 CRLF1 (ENSCPBG00000012911) #25 TMEM59L (ENSCPBG00000012910) #26 KLHL26 (ENSCPBG00000012909) #27 CRTC1 (ENSCPBG00000012907) #28 THBS4 (ENSCPBG00000012536) UPF1 (ENSCPBG00000012513) #30 ENSCPBG00000012510 CERS1 (ENSCPBG00000012508) COPE (ENSCPBG00000012504) #31 DDX49 (ENSCPBG00000012500) #32 HOMER3 (ENSCPBG00000012496) #33 ENSCPBG00000012490 SUGP2 (ENSCPBG00000012487) #34 ARMC6 (ENSCPBG00000012485) #35 Archosauria ANCESTRAL SPECIES 16 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Aves ANCESTRAL SPECIES 20 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Neognathae ANCESTRAL SPECIES 21 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Neognathae_b ANCESTRAL SPECIES 22 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Passeriformes ANCESTRAL SPECIES 34 ENSGT00950000182993.A.a ENSGT00550000075134 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Great tit MODERN SPECIES 21 NRTN (ENSPMJG00000011737) ENSPMJG00000011736 DUS3L (ENSPMJG00000011735) MPV17L2 (ENSPMJG00000011734) #7 RAB3A (ENSPMJG00000011732) #8 ENSPMJG00000011731 ENSPMJG00000011730 #12 LSM4 (ENSPMJG00000011729) #13 PGPEP1 (ENSPMJG00000011728) #14 GDF15 (ENSPMJG00000011726) #15 ENSPMJG00000011725 ENSPMJG00000011724 ELL (ENSPMJG00000011723) #19 FKBP8 (ENSPMJG00000011722) #20 KXD1 (ENSPMJG00000011721) #21 UBA52 (ENSPMJG00000011720) #22 ENSPMJG00000011719 CRLF1 (ENSPMJG00000011718) #25 TMEM59L (ENSPMJG00000011717) #26 KLHL26 (ENSPMJG00000011716) #27 CRTC1 (ENSPMJG00000011715) #28 ENSPMJG00000011713 SLC25A42 (ENSPMJG00000011711) #36 ARMC6 (ENSPMJG00000011710) #35 SUGP2 (ENSPMJG00000011709) #34 ENSPMJG00000011708 ENSPMJG00000011707 MAP1S (ENSPMJG00000011706) GADD45B (ENSPMJG00000011705) GNG7 (ENSPMJG00000011702) DIRAS1 (ENSPMJG00000011701) Passeriformes_d ANCESTRAL SPECIES 35 ENSGT00940000158364 ENSGT00950000182993.A.a ENSGT00550000075134 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Passeriformes_g ANCESTRAL SPECIES 39 ENSGT00550000075134 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Passeroidea ANCESTRAL SPECIES 38 ENSGT00550000075134 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000162806 #12 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Common canary MODERN SPECIES 109 CTXN1 (ENSSCAG00000012543) NMRK2 (ENSSCAG00000012140) DAPK3 (ENSSCAG00000012137) EEF2 (ENSSCAG00000012124) PIAS4 (ENSSCAG00000012119) ZBTB7A (ENSSCAG00000012113) MAP2K2 (ENSSCAG00000012101) CREB3L3 (ENSSCAG00000012049) SIRT6 (ENSSCAG00000012043) ENSSCAG00000012041 EBI3 (ENSSCAG00000012039) ENSSCAG00000012020 #18 ELL (ENSSCAG00000012011) #19 FKBP8 (ENSSCAG00000011929) #20 KXD1 (ENSSCAG00000011900) #21 UBA52 (ENSSCAG00000011895) #22 ENSSCAG00000011890 CRLF1 (ENSSCAG00000011886) #25 TMEM59L (ENSSCAG00000011880) #26 KLHL26 (ENSSCAG00000011874) #27 ENSSCAG00000011873 CRTC1 (ENSSCAG00000011818) #28 ENSSCAG00000011807 ENSSCAG00000011799 UPF1 (ENSSCAG00000011786) #30 ENSSCAG00000011782 ENSSCAG00000011780 SUGP2 (ENSSCAG00000011778) #34 ARMC6 (ENSSCAG00000011747) #35 SLC25A42 (ENSSCAG00000011740) #36 Neognathae_c ANCESTRAL SPECIES 24 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.a ##25 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 Kakapo MODERN SPECIES 13 PIK3R2 (ENSSHBG00005017536) IFI30 (ENSSHBG00005017530) MPV17L2 (ENSSHBG00005017526) #7 RAB3A (ENSSHBG00005017522) #8 ENSSHBG00005017510 JUND (ENSSHBG00005017505) #12 LSM4 (ENSSHBG00005017503) #13 PGPEP1 (ENSSHBG00005017497) #14 ENSSHBG00005017494 #15 ENSSHBG00005017492 SSBP4 (ENSSHBG00005017488) #17 ISYNA1 (ENSSHBG00005017482) #18 ELL (ENSSHBG00005017473) #19 FKBP8 (ENSSHBG00005017464) #20 KXD1 (ENSSHBG00005017459) #21 UBA52 (ENSSHBG00005017457) #22 ENSSHBG00005017455 CRLF1 (ENSSHBG00005017451) #25 TMEM59L (ENSSHBG00005017449) #26 KLHL26 (ENSSHBG00005017448) #27 CRTC1 (ENSSHBG00005017446) #28 ENSSHBG00005017399 UPF1 (ENSSHBG00005017089) #30 ENSSHBG00005017060 CERS1 (ENSSHBG00005017057) COPE (ENSSHBG00005017048) #31 DDX49 (ENSSHBG00005016700) #32 ENSSHBG00005016679 #33 HOMER3 (ENSSHBG00005016668) #33 ENSSHBG00005016648 SUGP2 (ENSSHBG00005016643) #34 Galloanserae ANCESTRAL SPECIES 20 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b.f #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000185433 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Phasianidae ANCESTRAL SPECIES 19 ENSGT00940000157166 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b.f #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Japanese quail MODERN SPECIES 20 ARRDC2 (ENSCJPG00005011929) ENSCJPG00005011928 MAST3 (ENSCJPG00005011912) PIK3R2 (ENSCJPG00005011909) IFI30 (ENSCJPG00005011906) MPV17L2 (ENSCJPG00005011905) #7 RAB3A (ENSCJPG00005011904) #8 JUND (ENSCJPG00005011902) #12 LSM4 (ENSCJPG00005011900) #13 PGPEP1 (ENSCJPG00005011899) #14 ENSCJPG00005011898 #15 ISYNA1 (ENSCJPG00005011896) #18 SSBP4 (ENSCJPG00005011692) #17 ELL (ENSCJPG00005011687) #19 KXD1 (ENSCJPG00005011685) #21 UBA52 (ENSCJPG00005011684) #22 FKBP8 (ENSCJPG00005011613) #20 ENSCJPG00005011611 CRLF1 (ENSCJPG00005011610) #25 ENSCJPG00005011609 KLHL26 (ENSCJPG00005011608) #27 CRTC1 (ENSCJPG00005011543) #28 ENSCJPG00005011352 UPF1 (ENSCJPG00005011267) #30 ENSCJPG00005011266 CERS1 (ENSCJPG00005011264) COPE (ENSCJPG00005011259) #31 DDX49 (ENSCJPG00005011191) #32 ENSCJPG00005011190 #33 ENSCJPG00005011189 #33 ENSCJPG00005011188 Phasianidae_b ANCESTRAL SPECIES 20 ENSGT00940000157166 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b.f #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Chicken MODERN SPECIES 20 MAST3 (ENSGALG00010027335) PIK3R2 (ENSGALG00010027324) ENSGALG00010027321 MPV17L2 (ENSGALG00010027317) #7 RAB3A (ENSGALG00010027315) #8 ENSGALG00010027314 JUND (ENSGALG00010027307) #12 LSM4 (ENSGALG00010027305) #13 PGPEP1 (ENSGALG00010027299) #14 ENSGALG00010027172 #15 SSBP4 (ENSGALG00010027168) #17 ISYNA1 (ENSGALG00010027156) #18 ELL (ENSGALG00010027148) #19 KXD1 (ENSGALG00010027146) #21 FKBP8 (ENSGALG00010027137) #20 UBA52 (ENSGALG00010027131) #22 ENSGALG00010028465 CRLF1 (ENSGALG00010028460) #25 TMEM59L (ENSGALG00010028451) #26 KLHL26 (ENSGALG00010028191) #27 CRTC1 (ENSGALG00010028183) #28 COMP (ENSGALG00010028177) UPF1 (ENSGALG00010028176) #30 GDF3 (ENSGALG00010028173) CERS1 (ENSGALG00010028172) COPE (ENSGALG00010028170) #31 DDX49 (ENSGALG00010028158) #32 HOMER3 (ENSGALG00010028744) #33 ENSGALG00010028152 ENSGALG00010028446 #34 SUGP2 (ENSGALG00010028124) #34 Turkey MODERN SPECIES 23 ARRDC2 (ENSMGAG00000004224) MAST3 (ENSMGAG00000004850) PIK3R2 (ENSMGAG00000005021) IFI30 (ENSMGAG00000005001) ENSMGAG00000018897 #7 ENSMGAG00000018526 #8 ENSMGAG00000020125 ENSMGAG00000021438 #12 LSM4 (ENSMGAG00000020592) #13 PGPEP1 (ENSMGAG00000005130) #14 ENSMGAG00000022829 #15 ENSMGAG00000018105 #18 ELL (ENSMGAG00000005093) #19 FKBP8 (ENSMGAG00000004939) #20 KXD1 (ENSMGAG00000018696) #21 UBA52 (ENSMGAG00000021275) #22 ENSMGAG00000021060 CRLF1 (ENSMGAG00000008435) #25 TMEM59L (ENSMGAG00000004986) #26 ENSMGAG00000004970 #27 ENSMGAG00000004780 UPF1 (ENSMGAG00000004745) #30 ENSMGAG00000004721 CERS1 (ENSMGAG00000004709) COPE (ENSMGAG00000004649) #31 DDX49 (ENSMGAG00000004605) #32 HOMER3 (ENSMGAG00000004581) #33 ENSMGAG00000004513 SUGP2 (ENSMGAG00000004496) #34 ARMC6 (ENSMGAG00000004486) #35 SLC25A42 (ENSMGAG00000004473) #36 Australian saltwater crocodile MODERN SPECIES 3 ENSCPRG00005016343 MAST3 (ENSCPRG00005015910) PIK3R2 (ENSCPRG00005015821) IFI30 (ENSCPRG00005015813) MPV17L2 (ENSCPRG00005015809) #7 RAB3A (ENSCPRG00005015806) #8 ENSCPRG00005015804 ENSCPRG00005015785 ENSCPRG00005015779 LSM4 (ENSCPRG00005015775) #13 PGPEP1 (ENSCPRG00005015771) #14 ISYNA1 (ENSCPRG00005015768) #18 ELL (ENSCPRG00005015766) #19 FKBP8 (ENSCPRG00005015761) #20 KXD1 (ENSCPRG00005015756) #21 UBA52 (ENSCPRG00005015755) #22 ENSCPRG00005015753 CRLF1 (ENSCPRG00005015750) #25 ENSCPRG00005015749 ENSCPRG00005015746 KLHL26 (ENSCPRG00005015744) #27 ENSCPRG00005015741 ENSCPRG00005015738 ##28 CRTC1 (ENSCPRG00005015733) #28 ENSCPRG00005015729 UPF1 (ENSCPRG00005015727) #30 ENSCPRG00005015724 COPE (ENSCPRG00005015722) #31 DDX49 (ENSCPRG00005015719) #32 HOMER3 (ENSCPRG00005015713) #33 ENSCPRG00005015709 Amniota ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Theria ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Xenarthra ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Armadillo MODERN SPECIES 2148 ENSDNOG00000039571 DTNA (ENSDNOG00000010172) MAPRE2 (ENSDNOG00000013080) ENSDNOG00000040387 ##22 ZNF397 (ENSDNOG00000007835) ZSCAN30 (ENSDNOG00000007840) ENSDNOG00000037307 ZNF24 (ENSDNOG00000042508) ZNF396 (ENSDNOG00000041114) INO80C (ENSDNOG00000038430) GALNT1 (ENSDNOG00000012559) C18orf21 (ENSDNOG00000040725) RPRD1A (ENSDNOG00000038659) SLC39A6 (ENSDNOG00000045829) ELP2 (ENSDNOG00000009587) MOCOS (ENSDNOG00000009638) Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Primates ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Tarsier DUPLICATION Tarsier MODERN SPECIES 4218 ENSTSYG00000029276 ##22 ENSTSYG00000002154 TSHR (ENSTSYG00000006890) GTF2A1 (ENSTSYG00000036105) Tarsier MODERN SPECIES 4196 IL37 (ENSTSYG00000007924) ENSTSYG00000004044 IL1B (ENSTSYG00000007934) IL1A (ENSTSYG00000012203) CKAP2L (ENSTSYG00000012201) SLC20A1 (ENSTSYG00000014417) CHCHD5 (ENSTSYG00000029644) POLR1B (ENSTSYG00000003669) ENSTSYG00000033254 ENSTSYG00000030860 ##22 ZC3H6 (ENSTSYG00000031857) ZC3H8 (ENSTSYG00000006668) FBLN7 (ENSTSYG00000009436) TMEM87B (ENSTSYG00000003012) MERTK (ENSTSYG00000014720) ENSTSYG00000037405 Tarsier MODERN SPECIES 7185 PKP2 (ENSTSYG00000011724) YARS2 (ENSTSYG00000013725) DNM1L (ENSTSYG00000013712) FGD4 (ENSTSYG00000005033) BICD1 (ENSTSYG00000000268) ENSTSYG00000032965 ENSTSYG00000032929 ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Catarrhini DUPLICATION Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000155903 ENSGT00390000004438 ENSGT00530000062962.b.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Hominoidea ANCESTRAL SPECIES 23 ENSGT00940000155903 ENSGT00390000004438 ENSGT00530000062962.b.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Gibbon MODERN SPECIES 10 MLLT3 (ENSNLEG00000017518) FOCAD (ENSNLEG00000017507) HACD4 (ENSNLEG00000031309) IFNB1 (ENSNLEG00000018983) IFNW1 (ENSNLEG00000018982) IFNA5 (ENSNLEG00000036196) KLHL9 (ENSNLEG00000019003) IFNA6 (ENSNLEG00000029201) ENSNLEG00000033796 IFNA8 (ENSNLEG00000030844) ENSNLEG00000034867 IFNE (ENSNLEG00000017501) MTAP (ENSNLEG00000017496) CDKN2A (ENSNLEG00000017493) CDKN2B (ENSNLEG00000035407) ENSNLEG00000027862 ##22 DNAJC25 (ENSNLEG00000035715) PTGR1 (ENSNLEG00000017487) ZNF483 (ENSNLEG00000017483) ECPAS (ENSNLEG00000017480) LPAR1 (ENSNLEG00000017476) MUSK (ENSNLEG00000017469) SVEP1 (ENSNLEG00000017463) ENSNLEG00000033326 ENSNLEG00000032849 C9orf152 (ENSNLEG00000035418) PALM2AKAP2 (ENSNLEG00000017455) ENSNLEG00000035302 ENSNLEG00000028962 PTPN3 (ENSNLEG00000017436) EPB41L4B (ENSNLEG00000017431) Hominidae ANCESTRAL SPECIES 10 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Homo/Pan group ANCESTRAL SPECIES 27 ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.a ENSGT01000000214430.a.a.a.a.a.b.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Pan ANCESTRAL SPECIES 26 ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000165099 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Chimpanzee MODERN SPECIES 22 IFNW1 (ENSPTRG00000048978) IFNA21 (ENSPTRG00000048249) IFNA17 (ENSPTRG00000045595) IFNA14 (ENSPTRG00000044822) IFNA5 (ENSPTRG00000048038) KLHL9 (ENSPTRG00000022846) IFNA6 (ENSPTRG00000041238) ENSPTRG00000050673 IFNA2 (ENSPTRG00000020820) IFNA8 (ENSPTRG00000045477) ENSPTRG00000043432 IFNE (ENSPTRG00000020823) MTAP (ENSPTRG00000020825) CDKN2A (ENSPTRG00000020827) CDKN2B (ENSPTRG00000049465) ENSPTRG00000043190 ##22 DMRTA1 (ENSPTRG00000050201) MTRNR2L14 (ENSPTRG00000042327) ENSPTRG00000051343 ENSPTRG00000047423 ELAVL2 (ENSPTRG00000020830) IZUMO3 (ENSPTRG00000029308) TUSC1 (ENSPTRG00000029307) CAAP1 (ENSPTRG00000020831) PLAA (ENSPTRG00000020832) IFT74 (ENSPTRG00000020833) LRRC19 (ENSPTRG00000020834) TEK (ENSPTRG00000020835) EQTN (ENSPTRG00000020836) MOB3B (ENSPTRG00000020837) IFNK (ENSPTRG00000020838) Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000155903 ENSGT00390000004438 ENSGT00530000062962.b.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Rhinopithecus ANCESTRAL SPECIES 582 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 Golden snub-nosed monkey MODERN SPECIES 2851 MTAP (ENSRROG00000004628) CDKN2A (ENSRROG00000037214) CDKN2B (ENSRROG00000037735) ENSRROG00000042295 ##22 DMRTA1 (ENSRROG00000034145) Black snub-nosed monkey MODERN SPECIES 94 KLHL9 (ENSRBIG00000028501) IFNA8 (ENSRBIG00000029844) IFNE (ENSRBIG00000042935) MTAP (ENSRBIG00000039442) ENSRBIG00000033170 ENSRBIG00000030222 ##22 DMRTA1 (ENSRBIG00000034841) Cercopithecinae ANCESTRAL SPECIES 12 ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00910000147619 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000164672.b ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00390000004438 ENSGT00530000062962.b.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00910000147619 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000013920 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000164672.b ENSGT00940000161278 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b Cercopithecinae_d ANCESTRAL SPECIES 172 ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00910000147619 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000017010 ENSGT00550000074944 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT00390000005644 ENSGT00950000182767.b.b.d.hb.a.a.b ENSGT00940000156665 Sooty mangabey MODERN SPECIES 170 KLHL9 (ENSCATG00000015406) IFNA6 (ENSCATG00000022888) IFNE (ENSCATG00000042094) MTAP (ENSCATG00000041286) CDKN2A (ENSCATG00000009720) CDKN2B (ENSCATG00000036130) ENSCATG00000044350 ##22 DMRTA1 (ENSCATG00000034725) ENSCATG00000039863 ELAVL2 (ENSCATG00000012522) IZUMO3 (ENSCATG00000042543) CAAP1 (ENSCATG00000045198) PLAA (ENSCATG00000019480) ENSCATG00000040114 LRRC19 (ENSCATG00000034126) IFT74 (ENSCATG00000033075) TEK (ENSCATG00000033710) EQTN (ENSCATG00000010354) MOB3B (ENSCATG00000039675) C9orf72 (ENSCATG00000021978) ENSCATG00000036469 LINGO2 (ENSCATG00000021429) Drill MODERN SPECIES 328 ENSMLEG00000030280 IFNE (ENSMLEG00000040652) MTAP (ENSMLEG00000032984) CDKN2A (ENSMLEG00000033190) CDKN2B (ENSMLEG00000037377) ENSMLEG00000029879 ##22 ENSMLEG00000026917 ENSMLEG00000027098 ENSMLEG00000036838 Macaca ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.b ENSGT00950000182991.B.yb.a ENSGT00940000163078 ENSGT00940000162423 ENSGT00940000153593.c.b.d.a ##22 ENSGT00940000160640 ENSGT00910000147619 ENSGT00940000156823.e ENSGT00390000017601 ENSGT00390000017010 ENSGT00550000074944 ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000158840 ENSGT00390000010786 ENSGT01050000244898.a.a.a.b ENSGT01000000214430.b ENSGT00390000005644 ENSGT00940000156665 ENSGT00950000183134.c.b.p Pig-tailed macaque MODERN SPECIES 265 ENSMNEG00000043566 IFNA14 (ENSMNEG00000041515) KLHL9 (ENSMNEG00000031087) IFNA6 (ENSMNEG00000004784) ENSMNEG00000035314 ENSMNEG00000038078 IFNE (ENSMNEG00000038701) MTAP (ENSMNEG00000043027) CDKN2A (ENSMNEG00000044907) CDKN2B (ENSMNEG00000041291) ENSMNEG00000028735 ##22 DMRTA1 (ENSMNEG00000029016) ENSMNEG00000028981 ELAVL2 (ENSMNEG00000032526) IZUMO3 (ENSMNEG00000037442) Catarrhini ANCESTRAL SPECIES ENSGT00940000153593.c.b.d.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153593.c.b.d.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153593.c.b.d.b ##22 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000158988.a.a ENSGT00940000159522 ENSGT00940000162533 ENSGT00940000157315 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 ENSGT00940000153305.c.e.b ENSGT00940000154431.e.b ENSGT00950000182892.a.b.b ENSGT00940000153593.c.b.d.b ##22 ENSGT00390000003271 ENSGT00390000015236 ENSGT00390000009405.b.c.a.a.d.b.b.a.a.a ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.a ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 ENSGT00770000120611.B ENSGT00910000146860.b.b ENSGT00940000153470.a.a.a.b ENSGT00940000154947.f.b ENSGT00390000015089.d ENSGT00940000157167 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000158988.a.a ENSGT00940000159522 ENSGT00940000162533 ENSGT00940000157315 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 ENSGT00940000153305.c.e.b ENSGT00940000154431.e.b ENSGT00950000182892.a.b.b ENSGT00940000153593.c.b.d.b ##22 ENSGT00390000003271 ENSGT00390000015236 ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 ENSGT00770000120611.B ENSGT00910000146860.b.b ENSGT00940000153470.a.a.a.b ENSGT00940000154947.f.b ENSGT00390000015089.d ENSGT00940000157167 ENSGT00940000153095.g.b.a.b.n.a ENSGT00940000154957.B Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00940000158988.a.a ENSGT00940000159522 ENSGT00940000162533 ENSGT00940000157315 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 ENSGT00940000153305.c.e.b ENSGT00940000154431.e.b ENSGT00950000182892.a.b.b ENSGT00940000153593.c.b.d.b ##22 ENSGT00390000003271 ENSGT00390000015236 ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 ENSGT00770000120611.B ENSGT00910000146860.b.b ENSGT00940000153470.a.a.a.b ENSGT00940000154947.f.b ENSGT00390000015089.d ENSGT00940000157167 ENSGT00940000153095.g.b.a.b.n.a ENSGT00940000154957.B Drill MODERN SPECIES 1382 ENSMLEG00000037971 MAPK10 (ENSMLEG00000025936) ARHGAP24 (ENSMLEG00000039721) ENSMLEG00000026242 ##22 NPVF (ENSMLEG00000040253) C7orf31 (ENSMLEG00000036577) Sooty mangabey MODERN SPECIES 98 HOXA7 (ENSCATG00000032186) HOXA4 (ENSCATG00000029977) HOXA3 (ENSCATG00000035121) HOXA2 (ENSCATG00000033672) HOXA1 (ENSCATG00000034436) ENSCATG00000036904 ENSCATG00000033949 ENSCATG00000012253 SKAP2 (ENSCATG00000015604) ENSCATG00000044879 ENSCATG00000044832 SNX10 (ENSCATG00000044201) ENSCATG00000007882 HNRNPA2B1 (ENSCATG00000033325) NFE2L3 (ENSCATG00000040425) ENSCATG00000022058 ##22 NPVF (ENSCATG00000042042) C7orf31 (ENSCATG00000010408) OSBPL3 (ENSCATG00000043751) GSDME (ENSCATG00000037274) PALS2 (ENSCATG00000036634) NPY (ENSCATG00000041237) STK31 (ENSCATG00000021541) FAM221A (ENSCATG00000044412) ENSCATG00000040316 CCDC126 (ENSCATG00000033060) ENSCATG00000040046 ENSCATG00000043573 TRA2A (ENSCATG00000041219) ENSCATG00000036717 IGF2BP3 (ENSCATG00000036018) Macaca ANCESTRAL SPECIES 3 ENSGT00940000158988.a.a ENSGT00940000159522 ENSGT00940000162533 ENSGT00940000157315 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 ENSGT00940000153305.c.e.b ENSGT00940000154431.e.b ENSGT00950000182892.a.b.b ENSGT00940000153593.c.b.d.b ##22 ENSGT00390000003271 ENSGT00390000015236 ENSGT00390000009405.b.c.a.a.d.b.b.a.a.a ENSGT00390000009405.b.c.a.a.d.b.b.a.a.b.a ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000154947.f.b ENSGT00390000015089.d ENSGT00940000157167 ENSGT00940000153095.g.b.a.b.n.a Pig-tailed macaque MODERN SPECIES 534 HOXA5 (ENSMNEG00000041820) HOXA4 (ENSMNEG00000038108) HOXA3 (ENSMNEG00000045278) HOXA2 (ENSMNEG00000028148) HOXA1 (ENSMNEG00000043463) ENSMNEG00000027963 ENSMNEG00000040022 ENSMNEG00000045177 SKAP2 (ENSMNEG00000029161) ENSMNEG00000001360 ENSMNEG00000027968 SNX10 (ENSMNEG00000032503) ENSMNEG00000039531 HNRNPA2B1 (ENSMNEG00000029148) NFE2L3 (ENSMNEG00000040959) ENSMNEG00000011490 ##22 NPVF (ENSMNEG00000044212) C7orf31 (ENSMNEG00000040993) ENSMNEG00000040882 OSBPL3 (ENSMNEG00000037365) GSDME (ENSMNEG00000038751) PALS2 (ENSMNEG00000017368) NPY (ENSMNEG00000037164) STK31 (ENSMNEG00000030763) FAM221A (ENSMNEG00000040337) CCDC126 (ENSMNEG00000041538) ENSMNEG00000043436 ENSMNEG00000035994 TRA2A (ENSMNEG00000040670) IGF2BP3 (ENSMNEG00000029494) MALSU1 (ENSMNEG00000035724) Catarrhini ANCESTRAL SPECIES ENSGT00940000153593.c.b.e ##22 Hominoidea ANCESTRAL SPECIES ENSGT00940000153593.c.b.e ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000153593.c.b.e ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000153593.c.b.e ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000153593.c.b.e ##22 Pan ANCESTRAL SPECIES 2 ENSGT00940000155168.a.b ENSGT00910000147671 ENSGT00940000156809.b ENSGT00910000147406 ENSGT00940000156196 ENSGT00940000157921 ENSGT00940000165752 ENSGT00390000006540 ENSGT00940000161697.e ENSGT00940000157768 ENSGT00940000157780 ENSGT00940000161037 ENSGT00940000165502.b ENSGT00910000147705 ENSGT00940000157045 ENSGT00940000153593.c.b.e ##22 ENSGT00940000158728 ENSGT00390000018696 ENSGT00940000153704.A ENSGT00560000077278.b ENSGT00510000047602.r ENSGT00940000157131.b ENSGT00940000157527 ENSGT00940000158391 ENSGT00940000154355.e.a.b.b ENSGT00940000155488 ENSGT00940000157880 ENSGT00940000154397.b.c.b.b ENSGT00390000003114.e.b.b ENSGT00940000160520 ENSGT00510000048725 Chimpanzee MODERN SPECIES 16 RPL15 (ENSPTRG00000014695) NR1D2 (ENSPTRG00000014696) ENSPTRG00000050678 THRB (ENSPTRG00000014697) RARB (ENSPTRG00000014698) ENSPTRG00000052750 TOP2B (ENSPTRG00000014699) ENSPTRG00000043412 NGLY1 (ENSPTRG00000014700) ENSPTRG00000047793 OXSM (ENSPTRG00000014701) LRRC3B (ENSPTRG00000014702) NEK10 (ENSPTRG00000014703) ENSPTRG00000048639 SLC4A7 (ENSPTRG00000014704) ENSPTRG00000039223 ##22 ENSPTRG00000044197 ENSPTRG00000047583 EOMES (ENSPTRG00000014705) CMC1 (ENSPTRG00000014706) AZI2 (ENSPTRG00000014707) ZCWPW2 (ENSPTRG00000030289) ENSPTRG00000048417 RBMS3 (ENSPTRG00000014709) TGFBR2 (ENSPTRG00000014711) GADL1 (ENSPTRG00000014712) ENSPTRG00000051512 STT3B (ENSPTRG00000014713) OSBPL10 (ENSPTRG00000014714) ZNF860 (ENSPTRG00000011428) GPD1L (ENSPTRG00000043993) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00390000017405 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT00390000002485 ENSGT00390000010702 ENSGT00390000002509 ENSGT00940000159025 ENSGT00940000160729 ENSGT00940000156633 ENSGT00940000162279 ENSGT00940000162703 ENSGT00390000015889 ENSGT00730000111564 ENSGT00940000158189 ENSGT00940000153593.c.b.e ##22 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT00390000002485 ENSGT00390000010702 ENSGT00390000002509 ENSGT00940000159025 ENSGT00940000160729 ENSGT00940000154826.nb.a.a ENSGT00940000156633 ENSGT00940000162279 ENSGT00940000162703 ENSGT00390000015889 ENSGT00730000111564 ENSGT00940000158189 ENSGT00940000153593.c.b.e ##22 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 Vervet Monkey MODERN SPECIES 6 ZNF385D (ENSCSAG00000009784) ENSCSAG00000009780 UBE2E2 (ENSCSAG00000009772) UBE2E1 (ENSCSAG00000009770) NKIRAS1 (ENSCSAG00000009767) RPL15 (ENSCSAG00000009762) NR1D2 (ENSCSAG00000009757) THRB (ENSCSAG00000009750) RARB (ENSCSAG00000009736) TOP2B (ENSCSAG00000009724) NGLY1 (ENSCSAG00000009710) OXSM (ENSCSAG00000009700) LRRC3B (ENSCSAG00000018924) ENSCSAG00000009690 SLC4A7 (ENSCSAG00000009685) ENSCSAG00000018925 ##22 EOMES (ENSCSAG00000009676) ENSCSAG00000009671 AZI2 (ENSCSAG00000009664) ENSCSAG00000009660 RBMS3 (ENSCSAG00000009655) TGFBR2 (ENSCSAG00000009648) GADL1 (ENSCSAG00000009641) STT3B (ENSCSAG00000009633) OSBPL10 (ENSCSAG00000009622) GPD1L (ENSCSAG00000009615) CMTM8 (ENSCSAG00000009600) CMTM7 (ENSCSAG00000009595) CMTM6 (ENSCSAG00000009588) DYNC1LI1 (ENSCSAG00000009575) CNOT10 (ENSCSAG00000009525) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT00390000002485 ENSGT00390000010702 ENSGT00390000002509 ENSGT00940000159025 ENSGT00940000160729 ENSGT00940000154826.nb.a.a ENSGT00940000156633 ENSGT00940000162279 ENSGT00940000162703 ENSGT00390000015889 ENSGT00730000111564 ENSGT00940000158189 ENSGT00940000153593.c.b.e ##22 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153593.c.b.e ##22 Olive baboon MODERN SPECIES 13 SPARCL1 (ENSPANG00000014207) DMP1 (ENSPANG00000014206) IBSP (ENSPANG00000008567) MEPE (ENSPANG00000019861) SPP1 (ENSPANG00000017630) ENSPANG00000019860 PKD2 (ENSPANG00000008259) ENSPANG00000045201 PPM1K (ENSPANG00000017893) HERC6 (ENSPANG00000021686) HERC5 (ENSPANG00000014742) PYURF (ENSPANG00000041123) HERC3 (ENSPANG00000011209) NAP1L5 (ENSPANG00000000430) FAM13A (ENSPANG00000018305) ENSPANG00000011877 ##22 TIGD2 (ENSPANG00000017875) GPRIN3 (ENSPANG00000036816) ENSPANG00000021437 MMRN1 (ENSPANG00000022092) CCSER1 (ENSPANG00000023715) ENSPANG00000051085 GRID2 (ENSPANG00000009186) ENSPANG00000046446 ENSPANG00000051321 ENSPANG00000030511 ENSPANG00000045919 SMARCAD1 (ENSPANG00000019757) HPGDS (ENSPANG00000017690) ENSPANG00000037029 ENSPANG00000004585 Macaca ANCESTRAL SPECIES 18 ENSGT00390000017405 ENSGT00510000046787.e.a ENSGT00730000111489 ENSGT00730000111375 ENSGT00390000002485 ENSGT00390000010702 ENSGT00390000002509 ENSGT00940000159025 ENSGT00940000160729 ENSGT00940000156633 ENSGT00940000162279 ENSGT00940000162703 ENSGT00390000015889 ENSGT00730000111564 ENSGT00940000158189 ENSGT00940000153593.c.b.e ##22 ENSGT00950000183033.a.b.a ENSGT00940000162273 ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00390000001063 Pig-tailed macaque MODERN SPECIES 560 NUDT9 (ENSMNEG00000033450) SPARCL1 (ENSMNEG00000028043) DSPP (ENSMNEG00000028809) DMP1 (ENSMNEG00000031482) IBSP (ENSMNEG00000041631) MEPE (ENSMNEG00000025404) SPP1 (ENSMNEG00000043112) PKD2 (ENSMNEG00000029251) ENSMNEG00000035519 PPM1K (ENSMNEG00000039204) HERC6 (ENSMNEG00000043508) HERC5 (ENSMNEG00000040366) PYURF (ENSMNEG00000040100) NAP1L5 (ENSMNEG00000042035) HERC3 (ENSMNEG00000045189) ENSMNEG00000019048 ##22 FAM13A (ENSMNEG00000034375) TIGD2 (ENSMNEG00000001240) SNCA (ENSMNEG00000004974) MMRN1 (ENSMNEG00000029143) CCSER1 (ENSMNEG00000030774) ENSMNEG00000032609 GRID2 (ENSMNEG00000015816) ATOH1 (ENSMNEG00000006193) SMARCAD1 (ENSMNEG00000038117) HPGDS (ENSMNEG00000033422) PDLIM5 (ENSMNEG00000031120) CNTN6 (ENSMNEG00000018635) CHL1 (ENSMNEG00000028818) CNTN3 (ENSMNEG00000035492) ENSMNEG00000038271 Rhinopithecus ANCESTRAL SPECIES 660 ENSGT00940000162703 ENSGT00390000015889.k ENSGT00730000111564 ENSGT00940000158189 ENSGT00940000153593.c.b.e ##22 ENSGT00950000183033.a.b.a.gb Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 62 ENSRBIG00000032958 HS3ST1 (ENSRBIG00000003620) CLNK (ENSRBIG00000028108) ZNF518B (ENSRBIG00000023435) WDR1 (ENSRBIG00000000105) SLC2A9 (ENSRBIG00000044385) OTOP1 (ENSRBIG00000033498) TMEM128 (ENSRBIG00000028884) ENSRBIG00000024083 ##22 Black snub-nosed monkey MODERN SPECIES 193 NEK10 (ENSRBIG00000038842) ENSRBIG00000044525 SLC4A7 (ENSRBIG00000031613) ENSRBIG00000036521 ##22 ENSRBIG00000033614 HTR3D (ENSRBIG00000032796) HTR3C (ENSRBIG00000036099) HTR3E (ENSRBIG00000033134) ENSRBIG00000035285 EIF2B5 (ENSRBIG00000043590) DVL3 (ENSRBIG00000028805) AP2M1 (ENSRBIG00000009213) ABCF3 (ENSRBIG00000019800) VWA5B2 (ENSRBIG00000032106) ALG3 (ENSRBIG00000040140) ECE2 (ENSRBIG00000036172) PSMD2 (ENSRBIG00000006300) EIF4G1 (ENSRBIG00000037279) FAM131A (ENSRBIG00000041210) Black snub-nosed monkey MODERN SPECIES 1386 HERC5 (ENSRBIG00000028904) ENSRBIG00000031193 NAP1L5 (ENSRBIG00000009898) HERC3 (ENSRBIG00000029948) ENSRBIG00000021635 ##22 ENSRBIG00000028587 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3176 ENSRROG00000036519 NEK10 (ENSRROG00000017949) ENSRROG00000031406 SLC4A7 (ENSRROG00000041486) ENSRROG00000041109 ##22 ENSRROG00000014575 EOMES (ENSRROG00000034501) CMC1 (ENSRROG00000038802) AZI2 (ENSRROG00000030560) ZCWPW2 (ENSRROG00000002893) Golden snub-nosed monkey MODERN SPECIES 3138 HERC5 (ENSRROG00000044042) PYURF (ENSRROG00000002819) NAP1L5 (ENSRROG00000028999) HERC3 (ENSRROG00000041192) ENSRROG00000011924 ##22 FAM13A (ENSRROG00000042409) Platyrrhini ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Mas night monkey MODERN SPECIES 1045 MINDY2 (ENSANAG00000028968) SLTM (ENSANAG00000037031) RNF111 (ENSANAG00000030291) ENSANAG00000034564 MYO1E (ENSANAG00000031231) ENSANAG00000024145 FAM81A (ENSANAG00000030930) ENSANAG00000033630 BNIP2 (ENSANAG00000036618) FOXB1 (ENSANAG00000004930) ENSANAG00000014778 ANXA2 (ENSANAG00000023201) ICE2 (ENSANAG00000029936) ENSANAG00000028963 RORA (ENSANAG00000024475) ENSANAG00000035524 ##22 VPS13C (ENSANAG00000028331) ENSANAG00000030627 TLN2 (ENSANAG00000038172) TPM1 (ENSANAG00000030021) ENSANAG00000031826 LACTB (ENSANAG00000033008) ENSANAG00000028244 ENSANAG00000020165 RAB8B (ENSANAG00000014540) ENSANAG00000019426 APH1B (ENSANAG00000024233) CA12 (ENSANAG00000031578) USP3 (ENSANAG00000038125) ENSANAG00000019672 FBXL22 (ENSANAG00000018462) Cebidae ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Marmoset MODERN SPECIES 3 BTRC (ENSCJAG00000017573) LBX1 (ENSCJAG00000017569) ENSCJAG00000087194 TLX1 (ENSCJAG00000017563) KAZALD1 (ENSCJAG00000017554) SFXN3 (ENSCJAG00000017527) PDZD7 (ENSCJAG00000017518) LZTS2 (ENSCJAG00000041968) ENSCJAG00000078679 ENSCJAG00000017487 ENSCJAG00000062174 ENSCJAG00000017480 SEMA4G (ENSCJAG00000070347) SLF2 (ENSCJAG00000017425) PAX2 (ENSCJAG00000017397) ENSCJAG00000023350 ##22 HIF1AN (ENSCJAG00000041066) NDUFB8 (ENSCJAG00000037906) SEC31B (ENSCJAG00000017347) ENSCJAG00000081845 WNT8B (ENSCJAG00000046770) ENSCJAG00000045682 PKD2L1 (ENSCJAG00000042503) BLOC1S2 (ENSCJAG00000017269) CWF19L1 (ENSCJAG00000017176) CHUK (ENSCJAG00000017244) ERLIN1 (ENSCJAG00000017211) ENSCJAG00000072049 CPN1 (ENSCJAG00000017197) DNMBP (ENSCJAG00000017162) ENSCJAG00000085790 Cebidae_a ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Capuchin DUPLICATION Capuchin DUPLICATION Capuchin MODERN SPECIES INKA1 (ENSCCAG00000031235) CDHR4 (ENSCCAG00000035033) IP6K1 (ENSCCAG00000020144) ENSCCAG00000024445 ENSCCAG00000025025 GMPPB (ENSCCAG00000009003) RNF123 (ENSCCAG00000035650) MST1 (ENSCCAG00000029861) APEH (ENSCCAG00000030064) BSN (ENSCCAG00000027614) ENSCCAG00000031188 DAG1 (ENSCCAG00000033794) ENSCCAG00000037470 ENSCCAG00000027946 AMT (ENSCCAG00000030285) ENSCCAG00000037011 ##22 TCTA (ENSCCAG00000020886) ENSCCAG00000029968 ENSCCAG00000035444 USP4 (ENSCCAG00000030853) C3orf62 (ENSCCAG00000025866) IHO1 (ENSCCAG00000030209) C3orf84 (ENSCCAG00000036643) KLHDC8B (ENSCCAG00000028139) CCDC71 (ENSCCAG00000027094) LAMB2 (ENSCCAG00000035337) USP19 (ENSCCAG00000035273) ENSCCAG00000037772 QRICH1 (ENSCCAG00000037655) IMPDH2 (ENSCCAG00000037618) ENSCCAG00000025458 Capuchin MODERN SPECIES NFRKB (ENSCCAG00000022547) TMEM45B (ENSCCAG00000024426) BARX2 (ENSCCAG00000027214) ENSCCAG00000037290 ARHGAP32 (ENSCCAG00000036347) ENSCCAG00000000172 KCNJ5 (ENSCCAG00000021826) C11orf45 (ENSCCAG00000035237) KCNJ1 (ENSCCAG00000027825) FLI1 (ENSCCAG00000014342) ETS1 (ENSCCAG00000025251) ENSCCAG00000030721 KIRREL3 (ENSCCAG00000026745) ST3GAL4 (ENSCCAG00000034084) DCPS (ENSCCAG00000030779) ENSCCAG00000028368 ##22 TIRAP (ENSCCAG00000035574) FOXRED1 (ENSCCAG00000025248) SRPRA (ENSCCAG00000025602) FAM118B (ENSCCAG00000020310) RPUSD4 (ENSCCAG00000027838) CDON (ENSCCAG00000001077) VSIG10L2 (ENSCCAG00000006965) DDX25 (ENSCCAG00000027629) PUS3 (ENSCCAG00000035999) ENSCCAG00000019073 PATE4 (ENSCCAG00000035746) PATE3 (ENSCCAG00000020418) PATE2 (ENSCCAG00000025200) PATE1 (ENSCCAG00000029626) ACRV1 (ENSCCAG00000035549) Capuchin MODERN SPECIES 56 DPYS (ENSCCAG00000031986) DCSTAMP (ENSCCAG00000021560) ENSCCAG00000034487 ENSCCAG00000016651 RIMS2 (ENSCCAG00000037616) DCAF13 (ENSCCAG00000033103) SLC25A32 (ENSCCAG00000021065) ENSCCAG00000026753 CTHRC1 (ENSCCAG00000026640) FZD6 (ENSCCAG00000037830) BAALC (ENSCCAG00000028012) ATP6V1C1 (ENSCCAG00000027772) AZIN1 (ENSCCAG00000032476) KLF10 (ENSCCAG00000033474) ODF1 (ENSCCAG00000035817) ENSCCAG00000031229 ##22 UBR5 (ENSCCAG00000037120) RRM2B (ENSCCAG00000022244) ENSCCAG00000008235 ENSCCAG00000025833 NCALD (ENSCCAG00000026748) GRHL2 (ENSCCAG00000022767) SIRT5 (ENSCCAG00000019021) ZNF706 (ENSCCAG00000030190) ENSCCAG00000031187 YWHAZ (ENSCCAG00000037757) Strepsirrhini ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Mouse lemur MODERN SPECIES 30 CEBPZOS (ENSMICG00000046596) SULT6B1 (ENSMICG00000042050) EIF2AK2 (ENSMICG00000003317) GPATCH11 (ENSMICG00000003312) HEATR5B (ENSMICG00000003296) STRN (ENSMICG00000008661) VIT (ENSMICG00000008646) FEZ2 (ENSMICG00000014974) CRIM1 (ENSMICG00000045986) ENSMICG00000037378 ENSMICG00000043251 RASGRP3 (ENSMICG00000009609) LTBP1 (ENSMICG00000009581) TTC27 (ENSMICG00000043484) BIRC6 (ENSMICG00000009525) ENSMICG00000042221 ##22 YIPF4 (ENSMICG00000042040) SLC30A6 (ENSMICG00000016134) ENSMICG00000046776 SPAST (ENSMICG00000015575) ENSMICG00000032136 DPY30 (ENSMICG00000027078) MEMO1 (ENSMICG00000032271) SRD5A2 (ENSMICG00000035505) XDH (ENSMICG00000012384) EHD3 (ENSMICG00000043744) CAPN14 (ENSMICG00000034259) GALNT14 (ENSMICG00000012342) CAPN13 (ENSMICG00000012320) LCLAT1 (ENSMICG00000000644) ENSMICG00000047228 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Greater bamboo lemur MODERN SPECIES 293 ENSPSMG00000006512 RNF208 (ENSPSMG00000006509) CYSRT1 (ENSPSMG00000006502) RNF224 (ENSPSMG00000006499) ENSPSMG00000006496 TUBB4B (ENSPSMG00000006176) FAM166A (ENSPSMG00000006028) STPG3 (ENSPSMG00000006024) NELFB (ENSPSMG00000006014) TOR4A (ENSPSMG00000005966) ENSPSMG00000005957 NRARP (ENSPSMG00000005946) ENSPSMG00000005940 ENTPD8 (ENSPSMG00000005932) NSMF (ENSPSMG00000005410) ENSPSMG00000005218 ##22 PNPLA7 (ENSPSMG00000005206) MRPL41 (ENSPSMG00000005173) DPH7 (ENSPSMG00000005166) ZMYND19 (ENSPSMG00000005163) ARRDC1 (ENSPSMG00000005146) EHMT1 (ENSPSMG00000005076) ENSPSMG00000004994 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 599 TMEM203 (ENSPCOG00000011268) NDOR1 (ENSPCOG00000017736) RNF208 (ENSPCOG00000026627) CYSRT1 (ENSPCOG00000025629) RNF224 (ENSPCOG00000014998) SLC34A3 (ENSPCOG00000015740) TUBB4B (ENSPCOG00000021987) FAM166A (ENSPCOG00000013156) ENSPCOG00000021029 NELFB (ENSPCOG00000017895) NRARP (ENSPCOG00000002426) ENSPCOG00000021123 ENTPD8 (ENSPCOG00000017702) NSMF (ENSPCOG00000005696) PNPLA7 (ENSPCOG00000018486) ENSPCOG00000023919 ##22 DPH7 (ENSPCOG00000016304) ENSPCOG00000028798 ARRDC1 (ENSPCOG00000020949) EHMT1 (ENSPCOG00000025217) Coquerels sifaka MODERN SPECIES 589 PIK3R2 (ENSPCOG00000021064) IFI30 (ENSPCOG00000015786) MPV17L2 (ENSPCOG00000003636) #7 RAB3A (ENSPCOG00000013539) #8 PDE4C (ENSPCOG00000014383) #9 IQCN (ENSPCOG00000025626) #11 JUND (ENSPCOG00000014234) #12 LSM4 (ENSPCOG00000019837) #13 PGPEP1 (ENSPCOG00000022097) #14 GDF15 (ENSPCOG00000019844) #15 LRRC25 (ENSPCOG00000028609) #16 SSBP4 (ENSPCOG00000017141) #17 ISYNA1 (ENSPCOG00000023528) #18 ELL (ENSPCOG00000024473) #19 FKBP8 (ENSPCOG00000024761) #20 ENSPCOG00000012784 ##22 REX1BD (ENSPCOG00000014515) #23 CRLF1 (ENSPCOG00000013640) #25 TMEM59L (ENSPCOG00000026454) #26 KLHL26 (ENSPCOG00000028544) #27 CRTC1 (ENSPCOG00000027092) #28 COMP (ENSPCOG00000023117) #29 UPF1 (ENSPCOG00000023813) #30 GDF1 (ENSPCOG00000015607) COPE (ENSPCOG00000015758) #31 DDX49 (ENSPCOG00000024973) #32 HOMER3 (ENSPCOG00000014798) #33 SUGP2 (ENSPCOG00000016042) #34 ARMC6 (ENSPCOG00000017481) #35 SLC25A42 (ENSPCOG00000026001) #36 TMEM161A (ENSPCOG00000012683) #37 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Glires ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Lagomorpha ANCESTRAL SPECIES 387 ENSGT00530000064192 #21 ENSGT00940000153593.c.b ##22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 Pika MODERN SPECIES 6984 KXD1 (ENSOPRG00000004769) #21 ENSOPRG00000004784 ##22 REX1BD (ENSOPRG00000004796) #23 CRLF1 (ENSOPRG00000004812) #25 Rabbit MODERN SPECIES 14 ZBTB10 (ENSOCUG00000001857) ZNF704 (ENSOCUG00000016504) ENSOCUG00000023452 PAG1 (ENSOCUG00000014767) FABP5 (ENSOCUG00000010425) ENSOCUG00000007445 FABP12 (ENSOCUG00000013189) SNX16 (ENSOCUG00000023666) ENSOCUG00000035758 IMPA1 (ENSOCUG00000014535) CHMP4C (ENSOCUG00000006847) ENSOCUG00000023213 RALYL (ENSOCUG00000025694) ENSOCUG00000032856 ENSOCUG00000024529 ENSOCUG00000026096 ##22 LRRCC1 (ENSOCUG00000014653) ENSOCUG00000031215 ENSOCUG00000012890 ENSOCUG00000024948 CA13 (ENSOCUG00000007328) ENSOCUG00000005039 ENSOCUG00000035812 CA3 (ENSOCUG00000011736) CA2 (ENSOCUG00000011742) ATP6V0D2 (ENSOCUG00000010247) PSKH2 (ENSOCUG00000003992) ENSOCUG00000026370 SLC7A13 (ENSOCUG00000017971) WWP1 (ENSOCUG00000001081) RMDN1 (ENSOCUG00000001086) Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.a ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.a ##22 Degu DUPLICATION Degu MODERN SPECIES 122 ENSODEG00000005041 TOMM70 (ENSODEG00000005476) ENSODEG00000007594 LNP1 (ENSODEG00000005232) ENSODEG00000005682 ENSODEG00000019267 ENSODEG00000006299 TMEM45A (ENSODEG00000005098) ADGRG7 (ENSODEG00000005676) ENSODEG00000005535 ABI3BP (ENSODEG00000005855) IMPG2 (ENSODEG00000006079) ENSODEG00000005550 SENP7 (ENSODEG00000006738) ENSODEG00000005207 ENSODEG00000019290 ##22 ZBTB11 (ENSODEG00000006262) ENSODEG00000005842 ENSODEG00000006503 NXPE3 (ENSODEG00000006809) ENSODEG00000007096 ENSODEG00000005326 NFKBIZ (ENSODEG00000005703) ENSODEG00000005667 ENSODEG00000007067 ZPLD1 (ENSODEG00000007525) ENSODEG00000006114 Degu MODERN SPECIES 135 PTPN3 (ENSODEG00000004452) EPB41L4B (ENSODEG00000004839) FRRS1L (ENSODEG00000004637) TMEM245 (ENSODEG00000004253) CTNNAL1 (ENSODEG00000004314) ABITRAM (ENSODEG00000004189) ELP1 (ENSODEG00000004049) ACTL7A (ENSODEG00000019643) ACTL7B (ENSODEG00000019638) ENSODEG00000019579 ENSODEG00000019543 ENSODEG00000006716 ENSODEG00000006336 ENSODEG00000006058 ZNF462 (ENSODEG00000005606) ENSODEG00000019163 ##22 TMEM38B (ENSODEG00000005342) TAL2 (ENSODEG00000019145) ENSODEG00000005239 FSD1L (ENSODEG00000004623) ENSODEG00000004572 SLC44A1 (ENSODEG00000004590) ENSODEG00000004309 ABCA1 (ENSODEG00000005925) ENSODEG00000004959 ENSODEG00000004904 ENSODEG00000019193 ENSODEG00000004859 OR13C4 (ENSODEG00000004667) ENSODEG00000004581 ENSODEG00000004541 Rodentia ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 98 WLS (ENSODEG00000006216) GNG12 (ENSODEG00000005519) GADD45A (ENSODEG00000007377) ENSODEG00000005146 ENSODEG00000006835 ENSODEG00000006396 SLC35D1 (ENSODEG00000005492) ENSODEG00000004802 DNAI4 (ENSODEG00000005891) ENSODEG00000005348 DYNLT5 (ENSODEG00000006520) SGIP1 (ENSODEG00000005002) ENSODEG00000005863 PDE4B (ENSODEG00000004887) LEPR (ENSODEG00000005568) ENSODEG00000019195 ##22 LEPROT (ENSODEG00000006321) ENSODEG00000006173 ENSODEG00000006986 ENSODEG00000006541 JAK1 (ENSODEG00000004472) RAVER2 (ENSODEG00000005253) CACHD1 (ENSODEG00000004991) ENSODEG00000004610 ROR1 (ENSODEG00000004832) ENSODEG00000005033 PGM1 (ENSODEG00000005752) ENSODEG00000005465 ENSODEG00000019103 ITGB3BP (ENSODEG00000005479) ENSODEG00000005048 Degu MODERN SPECIES 85 ENSODEG00000020288 HACD4 (ENSODEG00000014342) ENSODEG00000020253 FOCAD (ENSODEG00000015002) ENSODEG00000014558 MLLT3 (ENSODEG00000016615) ENSODEG00000015587 SLC24A2 (ENSODEG00000016346) ACER2 (ENSODEG00000014450) ENSODEG00000014595 ENSODEG00000020327 DENND4C (ENSODEG00000014636) PLIN2 (ENSODEG00000014348) HAUS6 (ENSODEG00000014005) ENSODEG00000020152 ##22 RRAGA (ENSODEG00000020270) ENSODEG00000020135 ENSODEG00000015675 ENSODEG00000014643 ADAMTSL1 (ENSODEG00000014029) SH3GL2 (ENSODEG00000014695) CNTLN (ENSODEG00000014534) ENSODEG00000014452 BNC2 (ENSODEG00000014630) CCDC171 (ENSODEG00000013824) ENSODEG00000014203 SNAPC3 (ENSODEG00000013737) TTC39B (ENSODEG00000014143) ENSODEG00000020161 ZDHHC21 (ENSODEG00000014991) Degu MODERN SPECIES 244 SOX2 (ENSODEG00000020013) ENSODEG00000013084 ENSODEG00000013066 ENSODEG00000020056 ATP11B (ENSODEG00000014170) ENSODEG00000012228 ENSODEG00000013129 ENSODEG00000020145 ENSODEG00000020304 ##22 MCCC1 (ENSODEG00000012286) LMLN (ENSODEG00000013287) ENSODEG00000012656 IQCG (ENSODEG00000012008) ENSODEG00000011786 LRCH3 (ENSODEG00000012839) ENSODEG00000012844 RUBCN (ENSODEG00000011517) ENSODEG00000011946 TFRC (ENSODEG00000012223) ZDHHC19 (ENSODEG00000011492) SLC51A (ENSODEG00000011108) PCYT1A (ENSODEG00000012250) DYNLT2B (ENSODEG00000012040) TM4SF19 (ENSODEG00000011698) Degu MODERN SPECIES 310 ENSODEG00000002294 ADAMTS3 (ENSODEG00000002211) GC (ENSODEG00000002161) SLC4A4 (ENSODEG00000002118) ENSODEG00000002024 DCK (ENSODEG00000001972) MOB1B (ENSODEG00000001893) ENSODEG00000001826 RUFY3 (ENSODEG00000001800) UTP3 (ENSODEG00000018723) ENSODEG00000018766 ##22 JCHAIN (ENSODEG00000001758) ENAM (ENSODEG00000001550) AMBN (ENSODEG00000001513) Rodentia_B ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Murinae ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Mus ANCESTRAL SPECIES ENSGT00940000153593.c.b.j.b ##22 Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 10 Ifi30 (MGP_PahariEiJ_G0021630) Mpv17l2 (MGP_PahariEiJ_G0021629) #7 Rab3a (MGP_PahariEiJ_G0021628) #8 Pde4c (MGP_PahariEiJ_G0021627) #9 MGP_PahariEiJ_G0021626 #10 MGP_PahariEiJ_G0021625 Jund (MGP_PahariEiJ_G0021624) #12 Lsm4 (MGP_PahariEiJ_G0021623) #13 Pgpep1 (MGP_PahariEiJ_G0021622) #14 Gdf15 (MGP_PahariEiJ_G0021621) #15 Lrrc25 (MGP_PahariEiJ_G0021620) #16 Ssbp4 (MGP_PahariEiJ_G0021619) #17 Isyna1 (MGP_PahariEiJ_G0021618) #18 Ell (MGP_PahariEiJ_G0021617) #19 Fkbp8 (MGP_PahariEiJ_G0021616) #20 MGP_PahariEiJ_G0021615 ##22 MGP_PahariEiJ_G0021614 ##22 Rex1bd (MGP_PahariEiJ_G0021613) #23 Crlf1 (MGP_PahariEiJ_G0021612) #25 Tmem59l (MGP_PahariEiJ_G0021611) #26 Klhl26 (MGP_PahariEiJ_G0021610) #27 Crtc1 (MGP_PahariEiJ_G0021609) #28 Comp (MGP_PahariEiJ_G0021608) #29 Upf1 (MGP_PahariEiJ_G0021607) #30 MGP_PahariEiJ_G0021606 Cope (MGP_PahariEiJ_G0021605) #31 Ddx49 (MGP_PahariEiJ_G0021604) #32 Homer3 (MGP_PahariEiJ_G0021603) #33 Sugp2 (MGP_PahariEiJ_G0021602) #34 Armc6 (MGP_PahariEiJ_G0021601) #35 Slc25a42 (MGP_PahariEiJ_G0021600) #36 Shrew mouse MODERN SPECIES 10 Mpv17l2 (MGP_PahariEiJ_G0021629) #7 Rab3a (MGP_PahariEiJ_G0021628) #8 Pde4c (MGP_PahariEiJ_G0021627) #9 MGP_PahariEiJ_G0021626 #10 MGP_PahariEiJ_G0021625 Jund (MGP_PahariEiJ_G0021624) #12 Lsm4 (MGP_PahariEiJ_G0021623) #13 Pgpep1 (MGP_PahariEiJ_G0021622) #14 Gdf15 (MGP_PahariEiJ_G0021621) #15 Lrrc25 (MGP_PahariEiJ_G0021620) #16 Ssbp4 (MGP_PahariEiJ_G0021619) #17 Isyna1 (MGP_PahariEiJ_G0021618) #18 Ell (MGP_PahariEiJ_G0021617) #19 Fkbp8 (MGP_PahariEiJ_G0021616) #20 MGP_PahariEiJ_G0021615 ##22 MGP_PahariEiJ_G0021614 ##22 Rex1bd (MGP_PahariEiJ_G0021613) #23 Crlf1 (MGP_PahariEiJ_G0021612) #25 Tmem59l (MGP_PahariEiJ_G0021611) #26 Klhl26 (MGP_PahariEiJ_G0021610) #27 Crtc1 (MGP_PahariEiJ_G0021609) #28 Comp (MGP_PahariEiJ_G0021608) #29 Upf1 (MGP_PahariEiJ_G0021607) #30 MGP_PahariEiJ_G0021606 Cope (MGP_PahariEiJ_G0021605) #31 Ddx49 (MGP_PahariEiJ_G0021604) #32 Homer3 (MGP_PahariEiJ_G0021603) #33 Sugp2 (MGP_PahariEiJ_G0021602) #34 Armc6 (MGP_PahariEiJ_G0021601) #35 Slc25a42 (MGP_PahariEiJ_G0021600) #36 Tmem161a (MGP_PahariEiJ_G0021599) #37 Rodentia ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Rodentia_A DUPLICATION Rodentia_A DUPLICATION Rodentia_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.a ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.a ##22 Degu MODERN SPECIES 274 ENSODEG00000002030 RBSN (ENSODEG00000001991) MRPS25 (ENSODEG00000001966) NR2C2 (ENSODEG00000001892) ENSODEG00000001861 ENSODEG00000001849 ##22 ENSODEG00000001772 TMCC1 (ENSODEG00000001710) PLXND1 (ENSODEG00000003347) RHO (ENSODEG00000003304) IFT122 (ENSODEG00000003013) ENSODEG00000002902 ENSODEG00000002891 CAND2 (ENSODEG00000002821) TMEM40 (ENSODEG00000002755) RAF1 (ENSODEG00000002734) MKRN2 (ENSODEG00000002702) MKRN2OS (ENSODEG00000002688) ENSODEG00000002676 SLC6A11 (ENSODEG00000002665) SLC6A1 (ENSODEG00000002644) Rodentia_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.b ##22 Marmotini ANCESTRAL SPECIES 34 ENSGT00940000161715.eb ENSGT00940000161715.db ENSGT00390000010047.b ENSGT00390000010047.a.a ENSGT00940000163676 ENSGT00940000155601 ENSGT00900000141021.a ENSGT01100000263517.b.d.m.b.b ENSGT00940000157639 ENSGT00390000013003 ENSGT00500000044895 ENSGT00940000157458 ENSGT00940000157906 ENSGT00940000159504 ENSGT00940000155130 ENSGT00940000153593.c.b.k.a.b ##22 ENSGT00390000012166.p ENSGT00390000012166.o ENSGT00940000159228 ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00950000183081.a.a.a ENSGT00940000154298.a.a.xb.b ENSGT00940000153838.b ENSGT00950000182888.a.a.b ENSGT00950000182951.B ENSGT00940000154079.a ENSGT00940000155091 ENSGT00390000011962 ENSGT00940000157702 Alpin marmot MODERN SPECIES 29 ENSMMMG00000015340 ENSMMMG00000015350 ENSMMMG00000015356 ENSMMMG00000015360 GLUL (ENSMMMG00000015363) ZNF648 (ENSMMMG00000015377) CACNA1E (ENSMMMG00000015391) MR1 (ENSMMMG00000015625) STX6 (ENSMMMG00000015643) KIAA1614 (ENSMMMG00000015664) XPR1 (ENSMMMG00000015684) ACBD6 (ENSMMMG00000015782) LHX4 (ENSMMMG00000015816) QSOX1 (ENSMMMG00000015840) CEP350 (ENSMMMG00000016323) ENSMMMG00000016730 ##22 TOR1AIP1 (ENSMMMG00000016740) TOR1AIP2 (ENSMMMG00000016746) FAM163A (ENSMMMG00000016748) TDRD5 (ENSMMMG00000016757) NPHS2 (ENSMMMG00000016793) ENSMMMG00000016805 SOAT1 (ENSMMMG00000016816) ENSMMMG00000016835 ENSMMMG00000016837 ABL2 (ENSMMMG00000016841) TOR3A (ENSMMMG00000016859) FAM20B (ENSMMMG00000016898) ENSMMMG00000016916 ANGPTL1 (ENSMMMG00000017095) TEX35 (ENSMMMG00000017108) Marmotini_b ANCESTRAL SPECIES 28 ENSGT00940000164414 ENSGT00940000161715.eb ENSGT00940000161715.db ENSGT00390000010047.b ENSGT00940000163676 ENSGT00940000155601 ENSGT00900000141021.a ENSGT01100000263517.b.d.m.b.b ENSGT00940000157639 ENSGT00390000013003 ENSGT00500000044895 ENSGT00940000157458 ENSGT00940000157906 ENSGT00940000159504 ENSGT00940000155130 ENSGT00940000153593.c.b.k.a.b ##22 ENSGT00390000012166.p ENSGT00390000012166.o ENSGT00940000159228 ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00950000183081.a.a.a ENSGT00940000154298.a.a.xb.b ENSGT00940000153838.b ENSGT00950000182888.a.a.b ENSGT00950000182951.B ENSGT00940000155091 ENSGT00940000154079.a ENSGT00390000011962 ENSGT00940000157702 Squirrel MODERN SPECIES 81 RNASEL (ENSSTOG00000007352) RGSL1 (ENSSTOG00000007337) GLUL (ENSSTOG00000014529) ZNF648 (ENSSTOG00000022536) CACNA1E (ENSSTOG00000009320) ENSSTOG00000023971 MR1 (ENSSTOG00000001462) STX6 (ENSSTOG00000001458) KIAA1614 (ENSSTOG00000001446) XPR1 (ENSSTOG00000021832) ACBD6 (ENSSTOG00000026856) LHX4 (ENSSTOG00000015761) QSOX1 (ENSSTOG00000015748) CEP350 (ENSSTOG00000015733) ENSSTOG00000030648 ENSSTOG00000027995 ##22 TOR1AIP1 (ENSSTOG00000022434) TOR1AIP2 (ENSSTOG00000019763) ENSSTOG00000019717 FAM163A (ENSSTOG00000012589) TDRD5 (ENSSTOG00000026328) NPHS2 (ENSSTOG00000012132) ENSSTOG00000012115 SOAT1 (ENSSTOG00000012105) ENSSTOG00000012349 ABL2 (ENSSTOG00000021312) TOR3A (ENSSTOG00000005108) FAM20B (ENSSTOG00000005086) RALGPS2 (ENSSTOG00000005052) ANGPTL1 (ENSSTOG00000019428) ENSSTOG00000034454 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.a.b ##22 Degu MODERN SPECIES 163 ENSODEG00000005825 ENSODEG00000005242 ELF1 (ENSODEG00000005272) ENSODEG00000005378 WBP4 (ENSODEG00000005811) ENSODEG00000004948 KBTBD7 (ENSODEG00000019293) MTRF1 (ENSODEG00000005782) ENSODEG00000006513 RGCC (ENSODEG00000005723) VWA8 (ENSODEG00000006290) ENSODEG00000005696 ENSODEG00000019364 ##22 ENSODEG00000019318 ENSODEG00000006776 DGKH (ENSODEG00000006365) AKAP11 (ENSODEG00000006558) ENSODEG00000007562 CPB2 (ENSODEG00000005426) ZC3H13 (ENSODEG00000005178) SIAH3 (ENSODEG00000006861) CBY2 (ENSODEG00000007190) COG3 (ENSODEG00000006373) SLC25A30 (ENSODEG00000005522) ENSODEG00000005658 GTF2F2 (ENSODEG00000006595) KCTD4 (ENSODEG00000019362) ENSODEG00000006647 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.b ##22 Marmotini ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.b ##22 Alpin marmot MODERN SPECIES 24 ENSMMMG00000001094 IFI30 (ENSMMMG00000001207) MPV17L2 (ENSMMMG00000001276) #7 RAB3A (ENSMMMG00000001289) #8 ENSMMMG00000001307 #9 ENSMMMG00000001318 #9 ENSMMMG00000001330 #10 ENSMMMG00000001343 #11 LSM4 (ENSMMMG00000001362) #13 PGPEP1 (ENSMMMG00000001398) #14 LRRC25 (ENSMMMG00000001420) #16 SSBP4 (ENSMMMG00000001427) #17 ISYNA1 (ENSMMMG00000001488) #18 ELL (ENSMMMG00000001572) #19 FKBP8 (ENSMMMG00000001633) #20 ENSMMMG00000001669 ##22 REX1BD (ENSMMMG00000001721) #23 CRLF1 (ENSMMMG00000001730) #25 ENSMMMG00000001749 #27 CRTC1 (ENSMMMG00000001771) #28 COMP (ENSMMMG00000001807) #29 UPF1 (ENSMMMG00000001874) #30 CERS1 (ENSMMMG00000002619) COPE (ENSMMMG00000002634) #31 DDX49 (ENSMMMG00000002658) #32 HOMER3 (ENSMMMG00000002691) #33 SUGP2 (ENSMMMG00000002743) #34 ARMC6 (ENSMMMG00000002877) #35 SLC25A42 (ENSMMMG00000002914) #36 TMEM161A (ENSMMMG00000002937) #37 MEF2B (ENSMMMG00000002982) Eurasian red squirrel MODERN SPECIES 12 DCXR (ENSSVLG00005016612) RFNG (ENSSVLG00005016551) DUS1L (ENSSVLG00005016028) CCDC57 (ENSSVLG00005015874) SLC16A3 (ENSSVLG00005015807) CSNK1D (ENSSVLG00005015703) ENSSVLG00005015524 ENSSVLG00005015478 ENSSVLG00005015429 ENSSVLG00005015399 ENSSVLG00005015380 ENSSVLG00005015359 OGFOD3 (ENSSVLG00005015237) HEXD (ENSSVLG00005015204) CYBC1 (ENSSVLG00005015097) ENSSVLG00005015071 ##22 NARF (ENSSVLG00005015005) FOXK2 (ENSSVLG00005014929) WDR45B (ENSSVLG00005014878) ENSSVLG00005014860 FN3KRP (ENSSVLG00005014751) FN3K (ENSSVLG00005014714) ENSSVLG00005014674 TBCD (ENSSVLG00005014621) B3GNTL1 (ENSSVLG00005014264) METRNL (ENSSVLG00005014147) ENSSVLG00005014084 ENSSVLG00005013969 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.b ##22 Guinea pig MODERN SPECIES 8 MFSD1 (ENSCPOG00000015291) ENSCPOG00000015295 SCHIP1 (ENSCPOG00000003961) Il12a (ENSCPOG00000000016) ENSCPOG00000026743 SMC4 (ENSCPOG00000006130) TRIM59 (ENSCPOG00000006122) KPNA4 (ENSCPOG00000010671) ARL14 (ENSCPOG00000010678) PPM1L (ENSCPOG00000005920) B3GALNT1 (ENSCPOG00000002846) NMD3 (ENSCPOG00000005953) SPTSSB (ENSCPOG00000038001) OTOL1 (ENSCPOG00000000011) ENSCPOG00000021511 ENSCPOG00000024936 ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153593.c.b.k.b ##22 Degu DUPLICATION Degu MODERN SPECIES 105 ENSODEG00000012932 ENSODEG00000013250 XPNPEP3 (ENSODEG00000013851) ENSODEG00000014217 SLC25A17 (ENSODEG00000013252) MCHR1 (ENSODEG00000012909) MRTFA (ENSODEG00000012960) SGSM3 (ENSODEG00000014094) ENSODEG00000020099 ##22 ADSL (ENSODEG00000012612) TNRC6B (ENSODEG00000013146) FAM83F (ENSODEG00000012376) ENSODEG00000012455 ENTHD1 (ENSODEG00000013716) CACNA1I (ENSODEG00000012240) RPS19BP1 (ENSODEG00000012767) ATF4 (ENSODEG00000012791) MIEF1 (ENSODEG00000012181) MGAT3 (ENSODEG00000013842) TAB1 (ENSODEG00000015803) SYNGR1 (ENSODEG00000016219) ENSODEG00000013672 PDGFB (ENSODEG00000012860) CBX7 (ENSODEG00000013496) Degu MODERN SPECIES 183 PTGER4 (ENSODEG00000003031) ENSODEG00000018877 TTC33 (ENSODEG00000003010) PRKAA1 (ENSODEG00000002974) ENSODEG00000002946 CARD6 (ENSODEG00000002921) MROH2B (ENSODEG00000002798) PLCXD3 (ENSODEG00000002710) OXCT1 (ENSODEG00000002607) ENSODEG00000002517 FBXO4 (ENSODEG00000001886) ENSODEG00000001859 GHR (ENSODEG00000001839) CCDC152 (ENSODEG00000001811) ENSODEG00000001793 ENSODEG00000018733 ##22 ENSODEG00000001566 ENSODEG00000018779 ARSJ (ENSODEG00000001386) ENSODEG00000001350 UGT8 (ENSODEG00000001338) ENSODEG00000001313 NDST4 (ENSODEG00000001269) ENSODEG00000001224 TRAM1L1 (ENSODEG00000001206) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 42 ITGAD (ENSODEG00000014989) COX6A2 (ENSODEG00000016022) ARMC5 (ENSODEG00000015387) TGFB1I1 (ENSODEG00000014864) SLC5A2 (ENSODEG00000015719) RUSF1 (ENSODEG00000015529) ENSODEG00000016207 ENSODEG00000015107 ENSODEG00000015248 MTO1 (ENSODEG00000015147) ENSODEG00000015292 CD109 (ENSODEG00000016097) ENSODEG00000015695 COL12A1 (ENSODEG00000015572) DST (ENSODEG00000015725) ENSODEG00000020392 ##22 ENSODEG00000020300 BEND6 (ENSODEG00000015776) ZNF451 (ENSODEG00000015693) ENSODEG00000015324 ENSODEG00000015963 RAB23 (ENSODEG00000016056) PRIM2 (ENSODEG00000015933) KHDRBS2 (ENSODEG00000015927) ENSODEG00000016695 ENSODEG00000015713 ENSODEG00000016016 LGSN (ENSODEG00000016651) ENSODEG00000016255 ENSODEG00000020332 ENSODEG00000015899 Degu MODERN SPECIES 194 ENSODEG00000015120 ENSODEG00000014495 ENSODEG00000014147 ENSODEG00000014415 RRP7A (ENSODEG00000015126) POLDIP3 (ENSODEG00000014224) CYB5R3 (ENSODEG00000014899) ENSODEG00000020211 ##22 A4GALT (ENSODEG00000014971) ARFGAP3 (ENSODEG00000014423) ENSODEG00000014382 PACSIN2 (ENSODEG00000013973) TTLL1 (ENSODEG00000015690) ENSODEG00000015823 MCAT (ENSODEG00000014684) TSPO (ENSODEG00000015371) TTLL12 (ENSODEG00000015110) ENSODEG00000014829 MPPED1 (ENSODEG00000016392) EFCAB6 (ENSODEG00000014555) SULT4A1 (ENSODEG00000014672) PNPLA5 (ENSODEG00000015510) PNPLA3 (ENSODEG00000014968) Degu MODERN SPECIES 264 DIPK2B (ENSODEG00000001640) KDM6A (ENSODEG00000001759) ENSODEG00000018726 ENSODEG00000018729 ##22 ENSODEG00000002036 ENSODEG00000018784 EFHC2 (ENSODEG00000002110) ENSODEG00000001919 NDP (ENSODEG00000001957) MAOB (ENSODEG00000001994) ENSODEG00000002078 MAOA (ENSODEG00000002111) ENSODEG00000002139 ENSODEG00000018778 ENSODEG00000002153 ENSODEG00000002169 ENSODEG00000002190 ENSODEG00000018783 Rodentia_B ANCESTRAL SPECIES 37 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b.k ##22 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Kangaroo rat MODERN SPECIES 427 Fcho1 (ENSDORG00000007853) Jak3 (ENSDORG00000012761) ENSDORG00000012479 Slc5a5 (ENSDORG00000012480) Ccdc124 (ENSDORG00000029588) Kcnn1 (ENSDORG00000028845) ENSDORG00000028690 ENSDORG00000004244 Mpv17l2 (ENSDORG00000009072) #7 Rab3a (ENSDORG00000009070) #8 Lsm4 (ENSDORG00000024225) #13 ENSDORG00000014394 Isyna1 (ENSDORG00000025359) #18 Fkbp8 (ENSDORG00000010135) #20 ENSDORG00000025514 #21 Gm11808 (ENSDORG00000026093) ##22 Tmem59l (ENSDORG00000024894) #26 Klhl26 (ENSDORG00000000436) #27 Crtc1 (ENSDORG00000026183) #28 Comp (ENSDORG00000027719) #29 Upf1 (ENSDORG00000009984) #30 ENSDORG00000023557 Cope (ENSDORG00000004298) #31 Ddx49 (ENSDORG00000004301) #32 ENSDORG00000004302 #33 Sugp2 (ENSDORG00000011519) #34 ENSDORG00000004418 #35 Slc25a42 (ENSDORG00000010998) #36 ENSDORG00000010999 #37 ENSDORG00000011003 Borcs8 (ENSDORG00000027906) Myomorpha ANCESTRAL SPECIES 43 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b.k ##22 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Lesser Egyptian jerboa MODERN SPECIES 127 Mpv17l2 (ENSJJAG00000017660) #7 Rab3a (ENSJJAG00000018501) #8 ENSJJAG00000010785 #10 Iqcn (ENSJJAG00000019138) #11 Jund (ENSJJAG00000004780) #12 Lsm4 (ENSJJAG00000017420) #13 ENSJJAG00000015593 Gdf15 (ENSJJAG00000023889) #15 Lrrc25 (ENSJJAG00000018044) #16 Ssbp4 (ENSJJAG00000022395) #17 Isyna1 (ENSJJAG00000023621) #18 ENSJJAG00000018151 Ell (ENSJJAG00000015761) #19 Fkbp8 (ENSJJAG00000012734) #20 ENSJJAG00000016159 #21 ENSJJAG00000005654 ##22 Rex1bd (ENSJJAG00000013226) #23 Crlf1 (ENSJJAG00000023822) #25 Tmem59l (ENSJJAG00000015054) #26 Klhl26 (ENSJJAG00000015486) #27 Crtc1 (ENSJJAG00000014073) #28 Comp (ENSJJAG00000011685) #29 Upf1 (ENSJJAG00000023151) #30 ENSJJAG00000000262 ENSJJAG00000016264 Cope (ENSJJAG00000017037) #31 Homer3 (ENSJJAG00000014551) #33 Sugp2 (ENSJJAG00000005264) #34 Armc6 (ENSJJAG00000014237) #35 Slc25a42 (ENSJJAG00000018672) #36 Mef2b (ENSJJAG00000009955) Muroidea ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Upper Galilee mountains blind mole rat MODERN SPECIES 1893 Syde2 (ENSNGAG00000012962) 2410004B18Rik (ENSNGAG00000014421) Bcl10 (ENSNGAG00000015335) Ddah1 (ENSNGAG00000018033) ENSNGAG00000003738 Ccn1 (ENSNGAG00000001335) Znhit6 (ENSNGAG00000007630) ENSNGAG00000015725 Odf2l (ENSNGAG00000018510) Clca2 (ENSNGAG00000017320) Clca1 (ENSNGAG00000020353) ENSNGAG00000021773 ENSNGAG00000020840 ENSNGAG00000022151 Sh3glb1 (ENSNGAG00000008323) ENSNGAG00000011552 ##22 ENSNGAG00000017891 Muroidea_A ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Cricetidae ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Northern American deer mouse MODERN SPECIES 8 ENSPEMG00000029300 Pik3r2 (ENSPEMG00000013483) Ifi30 (ENSPEMG00000016976) Rab3a (ENSPEMG00000021028) #8 ENSPEMG00000008172 #9 ENSPEMG00000010765 #10 ENSPEMG00000025156 #11 Jund (ENSPEMG00000005556) #12 Lsm4 (ENSPEMG00000001358) #13 Pgpep1 (ENSPEMG00000015017) #14 Lrrc25 (ENSPEMG00000012960) #16 Ssbp4 (ENSPEMG00000016738) #17 Isyna1 (ENSPEMG00000010118) #18 Ell (ENSPEMG00000006782) #19 Fkbp8 (ENSPEMG00000008423) #20 ENSPEMG00000018177 ##22 Rex1bd (ENSPEMG00000017857) #23 Crlf1 (ENSPEMG00000010464) #25 Tmem59l (ENSPEMG00000014170) #26 Klhl26 (ENSPEMG00000016863) #27 Crtc1 (ENSPEMG00000005110) #28 Comp (ENSPEMG00000019103) #29 Upf1 (ENSPEMG00000001085) #30 ENSPEMG00000029913 ENSPEMG00000012430 Cope (ENSPEMG00000018557) #31 Ddx49 (ENSPEMG00000009238) #32 Homer3 (ENSPEMG00000016382) #33 Sugp2 (ENSPEMG00000009700) #34 Armc6 (ENSPEMG00000012468) #35 Slc25a42 (ENSPEMG00000011354) #36 Prairie vole MODERN SPECIES 91 Mfsd6 (ENSMOCG00000019895) Inpp1 (ENSMOCG00000009111) Hibch (ENSMOCG00000020330) 1700019D03Rik (ENSMOCG00000021918) Mstn (ENSMOCG00000001300) 1700019A02Rik (ENSMOCG00000017364) ENSMOCG00000005449 Osgepl1 (ENSMOCG00000015854) Ankar (ENSMOCG00000020533) Asnsd1 (ENSMOCG00000009149) Slc40a1 (ENSMOCG00000006006) Wdr75 (ENSMOCG00000000741) Col5a2 (ENSMOCG00000002191) Col3a1 (ENSMOCG00000002459) Gulp1 (ENSMOCG00000017436) ENSMOCG00000000218 ##22 Mettl21e (ENSMOCG00000015480) Ercc5 (ENSMOCG00000000914) Bivm (ENSMOCG00000002409) Poglut2 (ENSMOCG00000011914) ENSMOCG00000000908 Tpp2 (ENSMOCG00000022482) Mettl21c (ENSMOCG00000017850) Cricetinae ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 284 Rec114 (ENSCGRG00001023909) Hcn4 (ENSCGRG00001024944) Neo1 (ENSCGRG00001022676) Adpgk (ENSCGRG00001009816) Bbs4 (ENSCGRG00001024924) Arih1 (ENSCGRG00001022908) Tmem202 (ENSCGRG00001017888) Hexa (ENSCGRG00001024953) Celf6 (ENSCGRG00001012872) Parp6 (ENSCGRG00001016223) ENSCGRG00001007673 Gramd2 (ENSCGRG00001007702) Senp8 (ENSCGRG00001023506) Myo9a (ENSCGRG00001009430) Nr2e3 (ENSCGRG00001022587) ENSCGRG00001017487 ##22 Thsd4 (ENSCGRG00001003064) Lrrc49 (ENSCGRG00001011265) Larp6 (ENSCGRG00001024472) Uaca (ENSCGRG00001000355) Tle3 (ENSCGRG00001024081) ENSCGRG00001022135 Kif23 (ENSCGRG00001024682) Paqr5 (ENSCGRG00001021586) Glce (ENSCGRG00001019156) Spesp1 (ENSCGRG00001015906) ENSCGRG00001022637 Coro2b (ENSCGRG00001025051) Itga11 (ENSCGRG00001016586) Fem1b (ENSCGRG00001018487) Cln6 (ENSCGRG00001016348) Chinese hamster chok1gshd MODERN SPECIES 212 Chpf2 (ENSCGRG00001011550) Abcf2 (ENSCGRG00001008869) Iqca1l (ENSCGRG00001021354) Asb10 (ENSCGRG00001020425) Gbx1 (ENSCGRG00001018832) Agap3 (ENSCGRG00001011337) ENSCGRG00001006068 Fastk (ENSCGRG00001002508) Slc4a2 (ENSCGRG00001023606) Cdk5 (ENSCGRG00001008797) Asic3 (ENSCGRG00001000304) Abcb8 (ENSCGRG00001020904) Atg9b (ENSCGRG00001020294) Nos3 (ENSCGRG00001012812) Kcnh2 (ENSCGRG00001005157) ENSCGRG00001003539 ##22 Aoc1l1 (ENSCGRG00001006146) Aoc1 (ENSCGRG00001004185) Tmem176a (ENSCGRG00001002583) Tmem176b (ENSCGRG00001000082) ENSCGRG00001024272 ENSCGRG00001024196 Gimap1 (ENSCGRG00001024093) Gimap7 (ENSCGRG00001023941) Gimap6 (ENSCGRG00001023782) Gimap4 (ENSCGRG00001019121) Gimap9 (ENSCGRG00001002112) Gimap8 (ENSCGRG00001018061) AI854703 (ENSCGRG00001003457) Repin1 (ENSCGRG00001017330) Zfp775 (ENSCGRG00001017136) Chinese hamster chok1gshd MODERN SPECIES 317 Rpp38 (ENSCGRG00001001395) Nmt2 (ENSCGRG00001014438) Fam171a1 (ENSCGRG00001015846) ENSCGRG00001022446 Itga8 (ENSCGRG00001021942) Mindy3 (ENSCGRG00001008270) Pter (ENSCGRG00001013707) C1ql3 (ENSCGRG00001002028) ENSCGRG00001023344 Rsu1 (ENSCGRG00001000898) Cubn (ENSCGRG00001019615) Trdmt1 (ENSCGRG00001001025) Vim (ENSCGRG00001015134) St8sia6 (ENSCGRG00001024875) Hacd1 (ENSCGRG00001017271) ENSCGRG00001012695 ##22 Stam (ENSCGRG00001022486) Tmem236 (ENSCGRG00001018727) Mrc1 (ENSCGRG00001017741) Slc39a12 (ENSCGRG00001009935) ENSCGRG00001013591 Cacnb2 (ENSCGRG00001017190) Nsun6 (ENSCGRG00001023166) Arl5b (ENSCGRG00001016642) Malrd1 (ENSCGRG00001022517) Plxdc2 (ENSCGRG00001024180) Nebl (ENSCGRG00001009495) Skida1 (ENSCGRG00001015186) Mllt10 (ENSCGRG00001013820) Dnajc1 (ENSCGRG00001020513) Commd3 (ENSCGRG00001017290) Chinese hamster chok1gshd MODERN SPECIES 54 ENSCGRG00001012942 ENSCGRG00001010002 Sgce (ENSCGRG00001021015) Casd1 (ENSCGRG00001001133) Col1a2 (ENSCGRG00001008152) Bet1 (ENSCGRG00001014879) Gng11 (ENSCGRG00001014889) Gngt1 (ENSCGRG00001016190) Tfpi2 (ENSCGRG00001019883) Calcr (ENSCGRG00001012972) Vps50 (ENSCGRG00001017930) Hepacam2 (ENSCGRG00001023099) ENSCGRG00001003461 ENSCGRG00001006338 ENSCGRG00001004929 ENSCGRG00001002207 ##22 Cdk6 (ENSCGRG00001004424) Fam133b (ENSCGRG00001015870) ENSCGRG00001021494 ENSCGRG00001007347 Gatad1 (ENSCGRG00001009429) Tmbim7 (ENSCGRG00001011095) Ankib1 (ENSCGRG00001018076) Rbm48 (ENSCGRG00001016551) Krit1 (ENSCGRG00001001397) Lrrd1 (ENSCGRG00001013802) Cyp51 (ENSCGRG00001017340) Ezh2 (ENSCGRG00001010172) Cul1 (ENSCGRG00001020843) Cntnap2 (ENSCGRG00001022024) Tpk1 (ENSCGRG00001023347) Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 631 Prnp (ENSMAUG00000020251) Adra1d (ENSMAUG00000009086) Smox (ENSMAUG00000011252) Rnf24 (ENSMAUG00000007938) Mavs (ENSMAUG00000014641) ENSMAUG00000010156 Cdc25b (ENSMAUG00000013356) Cenpb (ENSMAUG00000009494) Spef1 (ENSMAUG00000020367) ENSMAUG00000006345 Hspa12b (ENSMAUG00000015233) Siglec1 (ENSMAUG00000002470) Adam33 (ENSMAUG00000018073) Gfra4 (ENSMAUG00000021968) Atrn (ENSMAUG00000012223) ENSMAUG00000008969 ##22 ENSMAUG00000008516 ENSMAUG00000014651 Slc4a11 (ENSMAUG00000021645) Itpa (ENSMAUG00000021384) Ddrgk1 (ENSMAUG00000022014) Lzts3 (ENSMAUG00000021395) Fastkd5 (ENSMAUG00000020637) Ubox5 (ENSMAUG00000019757) ENSMAUG00000021401 Mrps26 (ENSMAUG00000019571) Ptpra (ENSMAUG00000022109) Vps16 (ENSMAUG00000010001) ENSMAUG00000021075 ENSMAUG00000022047 Cpxm1 (ENSMAUG00000020338) Golden Hamster MODERN SPECIES 660 Gdpd4 (ENSMAUG00000014553) Pak1 (ENSMAUG00000010646) Aqp11 (ENSMAUG00000010913) Clns1a (ENSMAUG00000019637) Rsf1 (ENSMAUG00000009412) Aamdc (ENSMAUG00000001048) Ints4 (ENSMAUG00000007877) Kctd14 (ENSMAUG00000015696) Thrsp (ENSMAUG00000013848) Ndufc2 (ENSMAUG00000009562) Alg8 (ENSMAUG00000012899) Usp35 (ENSMAUG00000003032) ENSMAUG00000008257 Nars2 (ENSMAUG00000002138) Tenm4 (ENSMAUG00000019277) ENSMAUG00000019787 ##22 ENSMAUG00000020090 ENSMAUG00000017096 Prcp (ENSMAUG00000018982) Rab30 (ENSMAUG00000008179) Pcf11 (ENSMAUG00000021407) Ankrd42 (ENSMAUG00000015024) Ccdc90b (ENSMAUG00000021266) Dlg2 (ENSMAUG00000012498) Tmem126b (ENSMAUG00000014289) Tmem126a (ENSMAUG00000016002) Crebzf (ENSMAUG00000010774) Ccdc89 (ENSMAUG00000005748) ENSMAUG00000017590 ENSMAUG00000000412 Ccdc83 (ENSMAUG00000008122) Murinae ANCESTRAL SPECIES ENSGT00940000153593.c.b.k ##22 Mus ANCESTRAL SPECIES 2 ENSGT00940000155246 ENSGT00550000074898 ENSGT00940000153704.B ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603 ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713 ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a ENSGT00940000153593.c.b.k ##22 ENSGT00940000154152.d.b.dc.b ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000155029.c.b ENSGT00940000159774 ENSGT00940000162072 ENSGT00940000158354 ENSGT00940000161108 ENSGT00940000161230 ENSGT00940000161529 ENSGT00940000161386 ENSGT00940000159029 ENSGT00940000161434 ENSGT00950000183025.a Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0018181 Npepps (MGP_PahariEiJ_G0018180) Tbkbp1 (MGP_PahariEiJ_G0018179) Tbx21 (MGP_PahariEiJ_G0018178) Osbpl7 (MGP_PahariEiJ_G0018177) Mrpl10 (MGP_PahariEiJ_G0018176) Lrrc46 (MGP_PahariEiJ_G0018175) Scrn2 (MGP_PahariEiJ_G0018174) Sp6 (MGP_PahariEiJ_G0018173) Sp2 (MGP_PahariEiJ_G0018172) Pnpo (MGP_PahariEiJ_G0018171) Prr15l (MGP_PahariEiJ_G0018170) Cdk5rap3 (MGP_PahariEiJ_G0018169) Copz2 (MGP_PahariEiJ_G0018168) Nfe2l1 (MGP_PahariEiJ_G0018167) MGP_PahariEiJ_G0018166 ##22 Cbx1 (MGP_PahariEiJ_G0018165) Snx11 (MGP_PahariEiJ_G0018164) Skap1 (MGP_PahariEiJ_G0018163) Hoxb1 (MGP_PahariEiJ_G0018162) Hoxb2 (MGP_PahariEiJ_G0018161) Hoxb3 (MGP_PahariEiJ_G0018160) Hoxb4 (MGP_PahariEiJ_G0018159) Hoxb5 (MGP_PahariEiJ_G0018158) Hoxb6 (MGP_PahariEiJ_G0018157) Hoxb7 (MGP_PahariEiJ_G0018156) Hoxb8 (MGP_PahariEiJ_G0018155) Hoxb9 (MGP_PahariEiJ_G0018154) Hoxb13 (MGP_PahariEiJ_G0018153) Ttll6 (MGP_PahariEiJ_G0018152) MGP_PahariEiJ_G0018151 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000155246 ENSGT00550000074898 ENSGT00940000153704.B ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603 ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713 ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a ENSGT00940000153593.c.b.k ##22 ENSGT00940000154152.d.b.dc.b ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000155029.c.b ENSGT00940000159774 ENSGT00940000162072 ENSGT00940000158354 ENSGT00940000161108 ENSGT00940000161230 ENSGT00940000161529 ENSGT00940000161386 ENSGT00940000159029 ENSGT00940000161434 ENSGT00950000183025.a Ryukyu mouse MODERN SPECIES 2 Npepps (MGP_CAROLIEiJ_G0017051) Kpnb1 (MGP_CAROLIEiJ_G0017050) Tbkbp1 (MGP_CAROLIEiJ_G0017049) Tbx21 (MGP_CAROLIEiJ_G0017048) Osbpl7 (MGP_CAROLIEiJ_G0017047) Mrpl10 (MGP_CAROLIEiJ_G0017046) Lrrc46 (MGP_CAROLIEiJ_G0017045) MGP_CAROLIEiJ_G0017044 Sp6 (MGP_CAROLIEiJ_G0017043) Sp2 (MGP_CAROLIEiJ_G0017042) Pnpo (MGP_CAROLIEiJ_G0017041) Prr15l (MGP_CAROLIEiJ_G0017040) Cdk5rap3 (MGP_CAROLIEiJ_G0017039) Copz2 (MGP_CAROLIEiJ_G0017038) Nfe2l1 (MGP_CAROLIEiJ_G0017037) MGP_CAROLIEiJ_G0017036 ##22 Cbx1 (MGP_CAROLIEiJ_G0017035) Snx11 (MGP_CAROLIEiJ_G0017034) Skap1 (MGP_CAROLIEiJ_G0017033) Hoxb1 (MGP_CAROLIEiJ_G0017032) Hoxb2 (MGP_CAROLIEiJ_G0017031) Hoxb3 (MGP_CAROLIEiJ_G0017030) Hoxb4 (MGP_CAROLIEiJ_G0017029) Hoxb5 (MGP_CAROLIEiJ_G0017028) Hoxb6 (MGP_CAROLIEiJ_G0017027) Hoxb7 (MGP_CAROLIEiJ_G0017026) Hoxb8 (MGP_CAROLIEiJ_G0017025) Hoxb9 (MGP_CAROLIEiJ_G0017024) Hoxb13 (MGP_CAROLIEiJ_G0017023) Ttll6 (MGP_CAROLIEiJ_G0017022) MGP_CAROLIEiJ_G0017021 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000155246 ENSGT00550000074898 ENSGT00940000153704.B ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603 ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713 ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a ENSGT00940000153593.c.b.k ##22 ENSGT00940000154152.d.b.dc.b ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000155029.c.b ENSGT00940000159774 ENSGT00940000162072 ENSGT00940000158354 ENSGT00940000161108 ENSGT00940000161230 ENSGT00940000161529 ENSGT00940000161386 ENSGT00940000159029 ENSGT00940000161434 ENSGT00950000183025.a Mouse DUPLICATION Mouse MODERN SPECIES 13 Asph (ENSMUSG00000028207) Clvs1 (ENSMUSG00000041216) Chd7 (ENSMUSG00000041235) Rab2a (ENSMUSG00000047187) Car8 (ENSMUSG00000041261) Tox (ENSMUSG00000041272) Nsmaf (ENSMUSG00000028245) Sdcbp (ENSMUSG00000028249) Cyp7a1 (ENSMUSG00000028240) Ubxn2b (ENSMUSG00000028243) Fam110b (ENSMUSG00000049119) Bpnt2 (ENSMUSG00000066324) Penk (ENSMUSG00000045573) Sdr16c6 (ENSMUSG00000071019) Sdr16c5 (ENSMUSG00000028236) Gm11808 (ENSMUSG00000068240) ##22 Chchd7 (ENSMUSG00000042198) Plag1 (ENSMUSG00000003282) Mos (ENSMUSG00000078365) Rps20 (ENSMUSG00000028234) Lyn (ENSMUSG00000042228) Tgs1 (ENSMUSG00000028233) Tmem68 (ENSMUSG00000028232) Vmn1r3 (ENSMUSG00000115466) Vmn1r2 (ENSMUSG00000115072) Mouse MODERN SPECIES 17 Ifi30 (ENSMUSG00000031838) Mpv17l2 (ENSMUSG00000035559) #7 Rab3a (ENSMUSG00000031840) #8 Pde4c (ENSMUSG00000031842) #9 Gm3336 (ENSMUSG00000095026) #10 Iqcn (ENSMUSG00000110622) #11 Jund (ENSMUSG00000071076) #12 Lsm4 (ENSMUSG00000031848) #13 Pgpep1 (ENSMUSG00000056204) #14 Gdf15 (ENSMUSG00000038508) #15 Lrrc25 (ENSMUSG00000049988) #16 Ssbp4 (ENSMUSG00000070003) #17 Isyna1 (ENSMUSG00000019139) #18 Ell (ENSMUSG00000070002) #19 Fkbp8 (ENSMUSG00000019428) #20 Kxd1 (ENSMUSG00000055553) ##22 Uba52 (ENSMUSG00000090137) #22 Rex1bd (ENSMUSG00000058833) #23 Crlf1 (ENSMUSG00000007888) #25 Tmem59l (ENSMUSG00000035964) #26 Klhl26 (ENSMUSG00000055707) #27 Crtc1 (ENSMUSG00000003575) #28 Comp (ENSMUSG00000031849) #29 Upf1 (ENSMUSG00000058301) #30 Gdf1 (ENSMUSG00000109523) Cers1 (ENSMUSG00000087408) Cope (ENSMUSG00000055681) #31 Ddx49 (ENSMUSG00000057788) #32 Homer3 (ENSMUSG00000003573) #33 Sugp2 (ENSMUSG00000036054) #34 Armc6 (ENSMUSG00000002343) #35 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000155246 ENSGT00550000074898 ENSGT00940000153704.B ENSGT00940000160397 ENSGT00940000157439 ENSGT00390000000603 ENSGT00940000161315 ENSGT00390000013474.b.a ENSGT00940000161498 ENSGT00940000159590 ENSGT00390000011219 ENSGT00940000154534.a ENSGT00390000000713 ENSGT00390000004405.b ENSGT00950000182892.a.b.a.a ENSGT00940000153593.c.b.k ##22 ENSGT00940000154152.d.b.dc.b ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000155029.c.b ENSGT00940000159774 ENSGT00940000162072 ENSGT00940000158354 ENSGT00940000161108 ENSGT00940000161230 ENSGT00940000161529 ENSGT00940000161386 ENSGT00940000159029 ENSGT00940000161434 ENSGT00950000183025.a spretus MODERN SPECIES 2 Npepps (MGP_SPRETEiJ_G0017897) Kpnb1 (MGP_SPRETEiJ_G0017896) Tbkbp1 (MGP_SPRETEiJ_G0017895) Tbx21 (MGP_SPRETEiJ_G0017894) Osbpl7 (MGP_SPRETEiJ_G0017893) Mrpl10 (MGP_SPRETEiJ_G0017892) Lrrc46 (MGP_SPRETEiJ_G0017891) Scrn2 (MGP_SPRETEiJ_G0017890) Sp6 (MGP_SPRETEiJ_G0017889) Sp2 (MGP_SPRETEiJ_G0017888) Pnpo (MGP_SPRETEiJ_G0017887) Prr15l (MGP_SPRETEiJ_G0017886) Cdk5rap3 (MGP_SPRETEiJ_G0017885) Copz2 (MGP_SPRETEiJ_G0017884) Nfe2l1 (MGP_SPRETEiJ_G0017883) MGP_SPRETEiJ_G0017882 ##22 Cbx1 (MGP_SPRETEiJ_G0017881) Snx11 (MGP_SPRETEiJ_G0017880) MGP_SPRETEiJ_G0017879 Hoxb1 (MGP_SPRETEiJ_G0017878) Hoxb2 (MGP_SPRETEiJ_G0017877) Hoxb3 (MGP_SPRETEiJ_G0017876) Hoxb4 (MGP_SPRETEiJ_G0017875) Hoxb5 (MGP_SPRETEiJ_G0017874) Hoxb6 (MGP_SPRETEiJ_G0017873) Hoxb7 (MGP_SPRETEiJ_G0017872) Hoxb8 (MGP_SPRETEiJ_G0017871) Hoxb9 (MGP_SPRETEiJ_G0017870) Hoxb13 (MGP_SPRETEiJ_G0017869) Ttll6 (MGP_SPRETEiJ_G0017868) MGP_SPRETEiJ_G0017867 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 46 Usp22 (ENSMSIG00000021279) Tnfrsf13b (ENSMSIG00000021289) Kcnj12 (ENSMSIG00000021296) ENSMSIG00000021305 ENSMSIG00000021332 Natd1 (ENSMSIG00000021341) ENSMSIG00000021354 Tmem11 (ENSMSIG00000021368) Dhrs7b (ENSMSIG00000021376) Shmt1 (ENSMSIG00000021407) Smcr8 (ENSMSIG00000021440) Top3a (ENSMSIG00000021461) Mief2 (ENSMSIG00000021923) Flii (ENSMSIG00000021934) Llgl1 (ENSMSIG00000022036) ENSMSIG00000022068 ##22 Steppe mouse MODERN SPECIES 3291 Kpnb1 (ENSMSIG00000017971) Tbkbp1 (ENSMSIG00000018040) Tbx21 (ENSMSIG00000018069) Osbpl7 (ENSMSIG00000018093) Mrpl10 (ENSMSIG00000018160) Lrrc46 (ENSMSIG00000018171) Scrn2 (ENSMSIG00000018202) Sp6 (ENSMSIG00000018223) Sp2 (ENSMSIG00000018237) ENSMSIG00000018267 ENSMSIG00000018270 Cdk5rap3 (ENSMSIG00000018309) Copz2 (ENSMSIG00000018337) Nfe2l1 (ENSMSIG00000018374) Cbx1 (ENSMSIG00000018447) ENSMSIG00000018520 ##22 Snx11 (ENSMSIG00000018546) Skap1 (ENSMSIG00000018601) Hoxb1 (ENSMSIG00000018752) Hoxb2 (ENSMSIG00000018769) Hoxb3 (ENSMSIG00000018771) ENSMSIG00000018776 Hoxb4 (ENSMSIG00000018777) Hoxb5 (ENSMSIG00000018787) Hoxb6 (ENSMSIG00000018795) Hoxb7 (ENSMSIG00000018805) Hoxb8 (ENSMSIG00000018807) Hoxb9 (ENSMSIG00000018823) Hoxb13 (ENSMSIG00000018865) Ttll6 (ENSMSIG00000018881) ENSMSIG00000018956 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00940000169413 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00940000171246 ENSGT00550000074924 ENSGT00940000160924 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000164353 ENSGT00940000162928 ENSGT00940000161007 ENSGT00390000018560.a.b Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00940000169413 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00940000171246 ENSGT00550000074924 ENSGT00940000160924 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000164353 ENSGT00940000162928 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00550000074924 ENSGT00940000160924 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000164353 ENSGT00940000162928 ENSGT00940000163677.a.a.d.a.a.a ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 Equus ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Donkey MODERN SPECIES 11 FAM227B (ENSEASG00005037184) FGF7 (ENSEASG00005016667) GALK2 (ENSEASG00005016671) COPS2 (ENSEASG00005016680) SECISBP2L (ENSEASG00005016797) SHC4 (ENSEASG00005016804) ENSEASG00005016810 CEP152 (ENSEASG00005016832) FBN1 (ENSEASG00005017178) DUT (ENSEASG00005017779) SLC12A1 (ENSEASG00005017794) CTXN2 (ENSEASG00005023826) MYEF2 (ENSEASG00005017818) SLC24A5 (ENSEASG00005017836) SEMA6D (ENSEASG00005017844) ENSEASG00005017867 ##22 SQOR (ENSEASG00005017873) ENSEASG00005034859 SLC30A4 (ENSEASG00005017885) ENSEASG00005035204 SPATA5L1 (ENSEASG00005017892) GATM (ENSEASG00005017893) ENSEASG00005033893 SHF (ENSEASG00005017909) DUOX1 (ENSEASG00005017922) DUOXA1 (ENSEASG00005017942) DUOXA2 (ENSEASG00005017945) DUOX2 (ENSEASG00005017953) SORD (ENSEASG00005017966) TERB2 (ENSEASG00005017968) TRIM69 (ENSEASG00005017972) Chiroptera ANCESTRAL SPECIES 46 ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00550000074924 ENSGT00940000160924 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000162928 ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000165494 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 Microchiroptera ANCESTRAL SPECIES 12 ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00550000074924 ENSGT00940000160924 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000162928 ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a ENSGT00940000162018 ENSGT00940000153062.C Microbat DUPLICATION Microbat MODERN SPECIES 947 CAPZA3 (ENSMLUG00000009150) PLCZ1 (ENSMLUG00000017203) PIK3C2G (ENSMLUG00000017194) ENSMLUG00000022198 ##22 RERGL (ENSMLUG00000013060) LMO3 (ENSMLUG00000029362) MGST1 (ENSMLUG00000002358) SLC15A5 (ENSMLUG00000014780) DERA (ENSMLUG00000002790) STRAP (ENSMLUG00000002797) EPS8 (ENSMLUG00000015815) ENSMLUG00000015781 RERG (ENSMLUG00000015778) PDE6H (ENSMLUG00000025996) ARHGDIB (ENSMLUG00000006248) ERP27 (ENSMLUG00000006242) MGP (ENSMLUG00000006238) ART4 (ENSMLUG00000006235) C12orf60 (ENSMLUG00000015212) Microbat MODERN SPECIES 1558 ENSMLUG00000029231 ##22 CERS4 (ENSMLUG00000003180) CD320 (ENSMLUG00000003185) NDUFA7 (ENSMLUG00000003194) RPS28 (ENSMLUG00000023621) KANK3 (ENSMLUG00000029771) ANGPTL4 (ENSMLUG00000023180) ENSMLUG00000006677 MARCHF2 (ENSMLUG00000006686) ENSMLUG00000006696 PRAM1 (ENSMLUG00000006719) ZNF414 (ENSMLUG00000006742) MYO1F (ENSMLUG00000006755) ADAMTS10 (ENSMLUG00000008143) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 6 RGS9BP (ENSRFEG00010005537) NUDT19 (ENSRFEG00010005577) SLC7A9 (ENSRFEG00010005658) CEP89 (ENSRFEG00010005716) FAAP24 (ENSRFEG00010005778) RHPN2 (ENSRFEG00010005821) ENSRFEG00010005895 LRP3 (ENSRFEG00010006084) SLC7A10 (ENSRFEG00010006133) CEBPA (ENSRFEG00010006198) CEBPG (ENSRFEG00010006215) PEPD (ENSRFEG00010006273) CHST8 (ENSRFEG00010006394) ENSRFEG00010006421 KCTD15 (ENSRFEG00010006447) ENSRFEG00010006482 ##22 LSM14A (ENSRFEG00010006525) GARRE1 (ENSRFEG00010006652) GPI (ENSRFEG00010006768) PDCD2L (ENSRFEG00010006934) UBA2 (ENSRFEG00010007015) WTIP (ENSRFEG00010007122) ENSRFEG00010007187 ZNF599 (ENSRFEG00010007314) ZNF792 (ENSRFEG00010007468) GRAMD1A (ENSRFEG00010007531) SCN1B (ENSRFEG00010007928) HPN (ENSRFEG00010008034) FXYD3 (ENSRFEG00010008134) LGI4 (ENSRFEG00010008235) ENSRFEG00010008312 Greater horseshoe bat MODERN SPECIES 25 ERBIN (ENSRFEG00010018803) SREK1 (ENSRFEG00010019098) MAST4 (ENSRFEG00010019202) CD180 (ENSRFEG00010019631) PIK3R1 (ENSRFEG00010019671) SLC30A5 (ENSRFEG00010019822) ENSRFEG00010019873 ENSRFEG00010019894 CCNB1 (ENSRFEG00010019903) CENPH (ENSRFEG00010019969) CDK7 (ENSRFEG00010020086) CCDC125 (ENSRFEG00010020154) AK6 (ENSRFEG00010020246) RAD17 (ENSRFEG00010020333) MARVELD2 (ENSRFEG00010020575) ENSRFEG00010020616 ##22 OCLN (ENSRFEG00010020630) ENSRFEG00010020675 ENSRFEG00010020726 ENSRFEG00010020777 ENSRFEG00010020824 BDP1 (ENSRFEG00010020860) MCCC2 (ENSRFEG00010020881) CARTPT (ENSRFEG00010020906) ENSRFEG00010020916 MAP1B (ENSRFEG00010020929) MRPS27 (ENSRFEG00010020956) PTCD2 (ENSRFEG00010020991) ZNF366 (ENSRFEG00010021033) ENSRFEG00010021056 TNPO1 (ENSRFEG00010021068) Carnivora ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Canidae ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Canis_lupus ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Dingo MODERN SPECIES 112 MPV17L2 (ENSCAFG00020012062) #7 RAB3A (ENSCAFG00020012068) #8 PDE4C (ENSCAFG00020012094) #9 ENSCAFG00020012098 #9 ENSCAFG00020012108 #11 LSM4 (ENSCAFG00020012137) #13 PGPEP1 (ENSCAFG00020012145) #14 ENSCAFG00020012147 GDF15 (ENSCAFG00020012162) #15 LRRC25 (ENSCAFG00020012163) #16 SSBP4 (ENSCAFG00020012164) #17 ISYNA1 (ENSCAFG00020012181) #18 ELL (ENSCAFG00020012204) #19 FKBP8 (ENSCAFG00020012233) #20 KXD1 (ENSCAFG00020012268) #21 ENSCAFG00020012269 ##22 ENSCAFG00020012276 #24 REX1BD (ENSCAFG00020012279) #23 CRLF1 (ENSCAFG00020012282) #25 TMEM59L (ENSCAFG00020012289) #26 KLHL26 (ENSCAFG00020012290) #27 CRTC1 (ENSCAFG00020012293) #28 COMP (ENSCAFG00020012328) #29 UPF1 (ENSCAFG00020012347) #30 GDF1 (ENSCAFG00020012350) CERS1 (ENSCAFG00020012351) COPE (ENSCAFG00020012363) #31 DDX49 (ENSCAFG00020012375) #32 HOMER3 (ENSCAFG00020012389) #33 SUGP2 (ENSCAFG00020012392) #34 ARMC6 (ENSCAFG00020012404) #35 Red fox MODERN SPECIES 23 S100A1 (ENSVVUG00000028255) CHTOP (ENSVVUG00000028256) SNAPIN (ENSVVUG00000028257) ILF2 (ENSVVUG00000028258) NPR1 (ENSVVUG00000028264) INTS3 (ENSVVUG00000028270) ENSVVUG00000028276 GATAD2B (ENSVVUG00000028277) DENND4B (ENSVVUG00000028280) CRTC2 (ENSVVUG00000028288) ##28 SLC39A1 (ENSVVUG00000028343) CREB3L4 (ENSVVUG00000028345) JTB (ENSVVUG00000028352) ENSVVUG00000028354 NUP210L (ENSVVUG00000028380) ENSVVUG00000028639 ##22 TPM3 (ENSVVUG00000028640) ENSVVUG00000028641 CFAP141 (ENSVVUG00000028643) ENSVVUG00000000125 CUNH1orf43 (ENSVVUG00000000194) UBAP2L (ENSVVUG00000000212) ENSVVUG00000000252 AQP10 (ENSVVUG00000000315) ATP8B2 (ENSVVUG00000000515) IL6R (ENSVVUG00000001704) SHE (ENSVVUG00000001751) UBE2Q1 (ENSVVUG00000001767) CHRNB2 (ENSVVUG00000001790) ADAR (ENSVVUG00000001831) KCNN3 (ENSVVUG00000001873) Caniformia_b ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Ursus ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 American black bear MODERN SPECIES 5171 ENSUAMG00000016305 ##22 Polar bear MODERN SPECIES 173 AP3B1 (ENSUMAG00000004124) ENSUMAG00000004694 WDR41 (ENSUMAG00000004705) PDE8B (ENSUMAG00000004797) ENSUMAG00000005026 ##22 AGGF1 (ENSUMAG00000005048) CRHBP (ENSUMAG00000005059) F2RL1 (ENSUMAG00000005075) F2R (ENSUMAG00000005082) IQGAP2 (ENSUMAG00000005302) F2RL2 (ENSUMAG00000007111) SV2C (ENSUMAG00000007138) POC5 (ENSUMAG00000007198) ANKDD1B (ENSUMAG00000007210) ENSUMAG00000007224 POLK (ENSUMAG00000007228) CERT1 (ENSUMAG00000007238) HMGCR (ENSUMAG00000007258) ENSUMAG00000007271 ENSUMAG00000007284 Giant Panda MODERN SPECIES 13 MTX3 (ENSAMEG00000015643) CMYA5 (ENSAMEG00000015633) TENT2 (ENSAMEG00000015619) HOMER1 (ENSAMEG00000015607) JMY (ENSAMEG00000015594) BHMT (ENSAMEG00000005696) BHMT2 (ENSAMEG00000005719) DMGDH (ENSAMEG00000005739) ARSB (ENSAMEG00000005783) LHFPL2 (ENSAMEG00000005794) SCAMP1 (ENSAMEG00000005799) AP3B1 (ENSAMEG00000005816) TBCA (ENSAMEG00000027837) OTP (ENSAMEG00000028076) WDR41 (ENSAMEG00000005933) ENSAMEG00000028764 ##22 PDE8B (ENSAMEG00000005971) AGGF1 (ENSAMEG00000001833) CRHBP (ENSAMEG00000001817) F2RL1 (ENSAMEG00000001809) F2R (ENSAMEG00000018602) F2RL2 (ENSAMEG00000001805) IQGAP2 (ENSAMEG00000001638) SV2C (ENSAMEG00000000836) POC5 (ENSAMEG00000000800) ANKDD1B (ENSAMEG00000000782) POLK (ENSAMEG00000000744) CERT1 (ENSAMEG00000000701) HMGCR (ENSAMEG00000000634) ENSAMEG00000030480 ENSAMEG00000000627 Mustelinae ANCESTRAL SPECIES 38 ENSGT00940000156667 ENSGT00940000154170.A ENSGT00390000004454 ENSGT00950000182940.b.b ENSGT01050000244840.A.b.b ENSGT00950000183076.b ENSGT01050000244840.A.a.b ENSGT01050000244840.A.a.a ENSGT00390000001362 ENSGT00730000111121 ENSGT00940000164103 ENSGT00940000157817 ENSGT00390000017026 ENSGT00940000159952 ENSGT00390000009710 ENSGT00940000153593.c.b ##22 ENSGT00940000157603 ENSGT00940000157310 ENSGT00990000203589.b.b ENSGT00940000158270 ENSGT00940000158176 ENSGT00390000003122.c.a ENSGT00510000046704.b.a ENSGT00940000156354 ENSGT00940000156640 ENSGT00940000159696 ENSGT00950000182919.B.b ENSGT00940000155227 ENSGT01030000234623.a.b.a ENSGT00950000182767.a.b.b ENSGT00940000163574 American mink MODERN SPECIES 112 SV2C (ENSNVIG00000003066) PAR3 (ENSNVIG00000003032) IQGAP2 (ENSNVIG00000002874) F2R (ENSNVIG00000002863) F2RL1 (ENSNVIG00000002854) CRHBP (ENSNVIG00000002829) AGGF1 (ENSNVIG00000002783) ZBED3 (ENSNVIG00000002773) ENSNVIG00000002723 WDR41 (ENSNVIG00000002651) OTP (ENSNVIG00000002637) TBCA (ENSNVIG00000002606) ENSNVIG00000002585 ##22 AP3B1 (ENSNVIG00000002504) SCAMP1 (ENSNVIG00000002476) LHPL2 (ENSNVIG00000002454) ARSB (ENSNVIG00000002402) DMGDH (ENSNVIG00000002369) BHMT (ENSNVIG00000002335) ENSNVIG00000002323 JMY (ENSNVIG00000002287) HOMER1 (ENSNVIG00000002206) TENT2 (ENSNVIG00000002064) CMYA5 (ENSNVIG00000002033) MTX3 (ENSNVIG00000002002) THBS4 (ENSNVIG00000001935) SERINC5 (ENSNVIG00000001875) SPZ1 (ENSNVIG00000001867) Ferret DUPLICATION Ferret MODERN SPECIES 238 MPV17L2 (ENSMPUG00000015712) #7 RAB3A (ENSMPUG00000015711) #8 PDE4C (ENSMPUG00000015593) #9 IQCN (ENSMPUG00000015591) #11 JUND (ENSMPUG00000019664) #12 ENSMPUG00000015590 LSM4 (ENSMPUG00000015589) #13 PGPEP1 (ENSMPUG00000015587) #14 GDF15 (ENSMPUG00000015586) #15 LRRC25 (ENSMPUG00000015584) #16 SSBP4 (ENSMPUG00000015560) #17 ISYNA1 (ENSMPUG00000015543) #18 ELL (ENSMPUG00000015542) #19 FKBP8 (ENSMPUG00000015541) #20 KXD1 (ENSMPUG00000015537) #21 ENSMPUG00000015527 ##22 REX1BD (ENSMPUG00000015526) #23 CRLF1 (ENSMPUG00000015524) #25 TMEM59L (ENSMPUG00000015522) #26 KLHL26 (ENSMPUG00000015521) #27 CRTC1 (ENSMPUG00000015520) #28 COMP (ENSMPUG00000015518) #29 UPF1 (ENSMPUG00000015516) #30 GDF1 (ENSMPUG00000015514) CERS1 (ENSMPUG00000015497) COPE (ENSMPUG00000015486) #31 DDX49 (ENSMPUG00000015485) #32 HOMER3 (ENSMPUG00000015484) #33 SUGP2 (ENSMPUG00000015478) #34 SLC25A42 (ENSMPUG00000015477) #36 TMEM161A (ENSMPUG00000015475) #37 Ferret MODERN SPECIES 438 ENSMPUG00000012647 INTS6L (ENSMPUG00000012649) ZNF449 (ENSMPUG00000012654) ZNF75D (ENSMPUG00000012657) ENSMPUG00000012659 ENSMPUG00000012664 RTL8C (ENSMPUG00000019453) MOSPD1 (ENSMPUG00000012671) ENSMPUG00000012674 ENSMPUG00000012681 ##22 PABIR2 (ENSMPUG00000012690) PLAC1 (ENSMPUG00000019454) ENSMPUG00000012698 HPRT1 (ENSMPUG00000012699) PHF6 (ENSMPUG00000012741) GPC3 (ENSMPUG00000012744) ENSMPUG00000012750 Ferret MODERN SPECIES 286 POLK (ENSMPUG00000005641) ANKDD1B (ENSMPUG00000005630) POC5 (ENSMPUG00000005619) SV2C (ENSMPUG00000005606) F2RL2 (ENSMPUG00000005597) IQGAP2 (ENSMPUG00000005569) F2R (ENSMPUG00000005558) F2RL1 (ENSMPUG00000005551) CRHBP (ENSMPUG00000005538) AGGF1 (ENSMPUG00000005518) PDE8B (ENSMPUG00000005262) WDR41 (ENSMPUG00000005197) ENSMPUG00000018800 OTP (ENSMPUG00000005191) ENSMPUG00000005179 ENSMPUG00000018799 ##22 ENSMPUG00000005174 AP3B1 (ENSMPUG00000005160) SCAMP1 (ENSMPUG00000005152) LHFPL2 (ENSMPUG00000005146) ARSB (ENSMPUG00000005100) DMGDH (ENSMPUG00000005093) BHMT (ENSMPUG00000005014) JMY (ENSMPUG00000005003) HOMER1 (ENSMPUG00000004991) TENT2 (ENSMPUG00000004983) CMYA5 (ENSMPUG00000004971) MTX3 (ENSMPUG00000004895) THBS4 (ENSMPUG00000004875) SERINC5 (ENSMPUG00000004807) SPZ1 (ENSMPUG00000019669) Artiodactyla ANCESTRAL SPECIES 5 ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00550000074924 ENSGT00940000160924 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000164353 ENSGT00940000162928 ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00550000074924 ENSGT00940000160924 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000164353 ENSGT00940000162928 ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Cetacea ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173.b #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b ##22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000153593.c.a #22 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 Monodontidae ANCESTRAL SPECIES 17 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173.b #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b ##22 ENSGT00390000011631 #23 ENSGT00910000147684 #24 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Narwhal MODERN SPECIES 298 MPV17L2 (ENSMMNG00015000089) #7 RAB3A (ENSMMNG00015000026) #8 PDE4C (ENSMMNG00015008093) #9 ENSMMNG00015008048 #11 JUND (ENSMMNG00015008033) #12 ENSMMNG00015008004 #13 ENSMMNG00015007982 PGPEP1 (ENSMMNG00015007946) #14 GDF15 (ENSMMNG00015007911) #15 LRRC25 (ENSMMNG00015007891) #16 SSBP4 (ENSMMNG00015007789) #17 ISYNA1 (ENSMMNG00015007654) #18 ELL (ENSMMNG00015007605) #19 FKBP8 (ENSMMNG00015007578) #20 KXD1 (ENSMMNG00015007547) #21 ENSMMNG00015007512 ##22 REX1BD (ENSMMNG00015007469) #23 CRLF1 (ENSMMNG00015007421) #25 TMEM59L (ENSMMNG00015007375) #26 KLHL26 (ENSMMNG00015007349) #27 CRTC1 (ENSMMNG00015007220) #28 COMP (ENSMMNG00015007143) #29 UPF1 (ENSMMNG00015007103) #30 GDF1 (ENSMMNG00015007086) CERS1 (ENSMMNG00015007051) COPE (ENSMMNG00015007007) #31 DDX49 (ENSMMNG00015006955) #32 HOMER3 (ENSMMNG00015006915) #33 SUGP2 (ENSMMNG00015006879) #34 ARMC6 (ENSMMNG00015006856) #35 SLC25A42 (ENSMMNG00015006831) #36 Pecora ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Bovidae ANCESTRAL SPECIES 8 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s ENSGT00940000153593.c.b ##22 ENSGT00940000158720.c.a ENSGT00940000159232.h.b ENSGT00940000156190.g ENSGT00940000159232.h.a ENSGT00940000156190.h ENSGT00390000004840 ENSGT00390000012547.b ENSGT00940000177631 ENSGT00940000156307.b ENSGT00940000159094 ENSGT00940000158720.c.b.t ENSGT00940000156597.b ENSGT00640000091496 ENSGT00390000001447 ENSGT00530000063688.a Caprinae ANCESTRAL SPECIES 5 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s ENSGT00940000153593.c.b ##22 ENSGT00940000158720.c.a ENSGT00940000159232.h.b ENSGT00940000159232.h.a ENSGT00940000156190.h ENSGT00390000004840 ENSGT00390000012547.b.g ENSGT00940000156307.b ENSGT00940000159094 ENSGT00940000158720.c.b.t ENSGT00940000156597.b ENSGT00640000091496 ENSGT00390000001447.lb.a ENSGT00530000063688.a ENSGT00940000157652 ENSGT01030000234570.d.a Rambouillet Sheep MODERN SPECIES 4 ENSOARG00020005771 DNAAF9 (ENSOARG00020005584) ATRN (ENSOARG00020004637) GFRA4 (ENSOARG00020004560) SIGLEC1 (ENSOARG00020004259) HSPA12B (ENSOARG00020004138) ADISSP (ENSOARG00020004070) ENSOARG00020003856 AP5S1 (ENSOARG00020003820) ENSOARG00020003796 PANK2 (ENSOARG00020003725) RNF24 (ENSOARG00020003694) SMOX (ENSOARG00020003633) ADRA1D (ENSOARG00020003607) HAO1 (ENSOARG00020003549) ENSOARG00020003535 ##22 ENSOARG00020003521 BMP2 (ENSOARG00020003483) FERMT1 (ENSOARG00020003426) LRRN4 (ENSOARG00020003388) CRLS1 (ENSOARG00020003262) TRMT6 (ENSOARG00020003220) MCM8 (ENSOARG00020012638) CHGB (ENSOARG00020003190) SHLD1 (ENSOARG00020012561) GPCPD1 (ENSOARG00020012291) ENSOARG00020012246 PROKR2 (ENSOARG00020012210) CDS2 (ENSOARG00020012047) PCNA (ENSOARG00020011991) TMEM230 (ENSOARG00020011962) Goat DUPLICATION Goat MODERN SPECIES 11 ADAM23 (ENSCHIG00000011689) FAM237A (ENSCHIG00000010865) DYTN (ENSCHIG00000016602) MDH1B (ENSCHIG00000022560) FASTKD2 (ENSCHIG00000015121) ENSCHIG00000003872 ENSCHIG00000026347 CPO (ENSCHIG00000020644) KLF7 (ENSCHIG00000006619) CREB1 (ENSCHIG00000027161) METTL21A (ENSCHIG00000003332) ENSCHIG00000011033 FZD5 (ENSCHIG00000007513) PLEKHM3 (ENSCHIG00000008278) ENSCHIG00000012358 ENSCHIG00000012148 ##22 ENSCHIG00000014620 ENSCHIG00000018066 ENSCHIG00000006930 CRYGA (ENSCHIG00000010538) C2orf80 (ENSCHIG00000012414) ENSCHIG00000018336 PIKFYVE (ENSCHIG00000018742) ENSCHIG00000011874 PTH2R (ENSCHIG00000003956) ENSCHIG00000015978 MAP2 (ENSCHIG00000000510) UNC80 (ENSCHIG00000023318) ENSCHIG00000017628 KANSL1L (ENSCHIG00000025531) ACADL (ENSCHIG00000012492) Goat MODERN SPECIES 26 IFI30 (ENSCHIG00000005544) ENSCHIG00000010984 RAB3A (ENSCHIG00000007327) #8 MPV17L2 (ENSCHIG00000025758) #7 PDE4C (ENSCHIG00000020852) #9 ENSCHIG00000008980 #10 LSM4 (ENSCHIG00000010928) #13 PGPEP1 (ENSCHIG00000026514) #14 GDF15 (ENSCHIG00000027142) #15 LRRC25 (ENSCHIG00000023973) #16 SSBP4 (ENSCHIG00000021686) #17 ISYNA1 (ENSCHIG00000023057) #18 ELL (ENSCHIG00000018044) #19 FKBP8 (ENSCHIG00000013446) #20 KXD1 (ENSCHIG00000027154) #21 ENSCHIG00000024401 ##22 REX1BD (ENSCHIG00000025942) #23 CRLF1 (ENSCHIG00000014402) #25 TMEM59L (ENSCHIG00000001269) #26 KLHL26 (ENSCHIG00000009198) #27 CRTC1 (ENSCHIG00000020510) #28 COMP (ENSCHIG00000015152) #29 UPF1 (ENSCHIG00000011018) #30 GDF1 (ENSCHIG00000026655) CERS1 (ENSCHIG00000021209) COPE (ENSCHIG00000019197) #31 DDX49 (ENSCHIG00000019910) #32 HOMER3 (ENSCHIG00000013425) #33 SUGP2 (ENSCHIG00000000571) #34 ARMC6 (ENSCHIG00000022745) #35 SLC25A42 (ENSCHIG00000017224) #36 Bovinae ANCESTRAL SPECIES 5 ENSGT00940000160642 ENSGT00440000037606.b ENSGT00940000158781 ENSGT00390000015769.B ENSGT00940000162403 ENSGT00530000063410.b ENSGT01030000234607.A.b ENSGT00940000161508 ENSGT00940000155235 ENSGT00940000155408 ENSGT00940000157249 ENSGT00940000154453.b.a.a ENSGT00940000162639 ENSGT00940000159743 ENSGT00940000158720.c.b.s ENSGT00940000153593.c.b ##22 ENSGT00940000158720.c.a ENSGT00940000159232.h.b ENSGT00940000156190.g ENSGT00940000156190.h ENSGT00390000004840 ENSGT00390000012547.b ENSGT00940000177631 ENSGT00940000156307.b ENSGT00950000182965.b ENSGT00940000159094 ENSGT00940000158720.c.b.t ENSGT00940000156597.b ENSGT00640000091496 ENSGT00390000001447 ENSGT00530000063688.a Bos ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Bos_a ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Domestic yak MODERN SPECIES 27 RAB3A (ENSBGRG00000026189) #8 PDE4C (ENSBGRG00000026196) #9 ENSBGRG00000026213 #10 JUND (ENSBGRG00000026238) #12 LSM4 (ENSBGRG00000026242) #13 ENSBGRG00000026247 PGPEP1 (ENSBGRG00000026256) #14 GDF15 (ENSBGRG00000026276) #15 LRRC25 (ENSBGRG00000026281) #16 SSBP4 (ENSBGRG00000026307) #17 ISYNA1 (ENSBGRG00000026356) #18 ELL (ENSBGRG00000026367) #19 ENSBGRG00000026374 ENSBGRG00000026382 #20 ENSBGRG00000026397 #21 ENSBGRG00000026400 ##22 ENSBGRG00000026408 #23 CRLF1 (ENSBGRG00000000399) #25 TMEM59L (ENSBGRG00000000427) #26 KLHL26 (ENSBGRG00000000466) #27 CRTC1 (ENSBGRG00000000542) #28 COMP (ENSBGRG00000000772) #29 UPF1 (ENSBGRG00000000885) #30 CERS1 (ENSBGRG00000000977) COPE (ENSBGRG00000001045) #31 DDX49 (ENSBGRG00000001122) #32 HOMER3 (ENSBGRG00000001163) #33 ENSBGRG00000001213 #33 SUGP2 (ENSBGRG00000001227) #34 ARMC6 (ENSBGRG00000001271) #35 SLC25A42 (ENSBGRG00000001293) #36 Bos_b ANCESTRAL SPECIES 36 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT01030000234883 #10 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705.q.b #20 ENSGT00530000064192.s #21 ENSGT00940000153593.c.b ##22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Cow MODERN SPECIES 26 PDE4C (ENSBTAG00000010652) #9 CIST1 (ENSBTAG00000033886) #10 ENSBTAG00000054700 #11 JUND (ENSBTAG00000052791) #12 LSM4 (ENSBTAG00000008578) #13 ENSBTAG00000053097 ENSBTAG00000053022 PGPEP1 (ENSBTAG00000002566) #14 GDF15 (ENSBTAG00000015618) #15 LRRC25 (ENSBTAG00000017273) #16 SSBP4 (ENSBTAG00000003947) #17 ISYNA1 (ENSBTAG00000017482) #18 ELL (ENSBTAG00000003587) #19 FKBP8 (ENSBTAG00000016264) #20 KXD1 (ENSBTAG00000010545) #21 UBA52 (ENSBTAG00000007737) ##22 REX1BD (ENSBTAG00000007739) #23 CRLF1 (ENSBTAG00000007741) #25 TMEM59L (ENSBTAG00000007698) #26 KLHL26 (ENSBTAG00000014114) #27 CRTC1 (ENSBTAG00000010379) #28 COMP (ENSBTAG00000004630) #29 UPF1 (ENSBTAG00000020922) #30 GDF1 (ENSBTAG00000020923) CERS1 (ENSBTAG00000037729) COPE (ENSBTAG00000000810) #31 DDX49 (ENSBTAG00000000811) #32 HOMER3 (ENSBTAG00000000813) #33 SUGP2 (ENSBTAG00000013288) #34 ARMC6 (ENSBTAG00000013291) #35 SLC25A42 (ENSBTAG00000001816) #36 American bison DUPLICATION American bison MODERN SPECIES 3330 ZDBF2 (ENSBBBG00000011029) ADAM23 (ENSBBBG00000011005) FAM237A (ENSBBBG00000010954) DYTN (ENSBBBG00000010949) MDH1B (ENSBBBG00000010925) FASTKD2 (ENSBBBG00000010905) CPO (ENSBBBG00000010898) ENSBBBG00000010890 KLF7 (ENSBBBG00000010885) CREB1 (ENSBBBG00000010873) METTL21A (ENSBBBG00000010854) ENSBBBG00000010833 FZD5 (ENSBBBG00000010805) PLEKHM3 (ENSBBBG00000010799) ENSBBBG00000010792 ENSBBBG00000010781 ##22 CRYGD (ENSBBBG00000010778) CRYGC (ENSBBBG00000001889) CRYGB (ENSBBBG00000010771) CRYGA (ENSBBBG00000010767) C2orf80 (ENSBBBG00000010761) IDH1 (ENSBBBG00000010731) PIKFYVE (ENSBBBG00000010714) ENSBBBG00000010646 PTH2R (ENSBBBG00000010642) ENSBBBG00000010626 MAP2 (ENSBBBG00000010617) UNC80 (ENSBBBG00000010561) ENSBBBG00000007586 KANSL1L (ENSBBBG00000010441) ACADL (ENSBBBG00000001806) American bison MODERN SPECIES 3165 LSM4 (ENSBBBG00000001281) #13 ENSBBBG00000001263 PGPEP1 (ENSBBBG00000001256) #14 GDF15 (ENSBBBG00000001254) #15 LRRC25 (ENSBBBG00000015319) #16 ENSBBBG00000015324 ##17 ISYNA1 (ENSBBBG00000015329) #18 ELL (ENSBBBG00000015350) #19 ENSBBBG00000015360 #20 KXD1 (ENSBBBG00000015390) #21 ENSBBBG00000002734 ##22 ENSBBBG00000015406 #23 CRLF1 (ENSBBBG00000003846) #25 TMEM59L (ENSBBBG00000015452) #26 ENSBBBG00000015461 #27 CRTC1 (ENSBBBG00000015471) #28 COMP (ENSBBBG00000002699) #29 UPF1 (ENSBBBG00000003867) #30 CERS1 (ENSBBBG00000015545) COPE (ENSBBBG00000015595) #31 DDX49 (ENSBBBG00000015616) #32 ENSBBBG00000003467 #33 ENSBBBG00000003456 #33 SUGP2 (ENSBBBG00000003426) #34 ARMC6 (ENSBBBG00000015629) #35 TMEM161A (ENSBBBG00000007455) #37 Camelidae ANCESTRAL SPECIES 9 ENSGT00420000029858 ENSGT00420000029847 ENSGT00940000156370 ENSGT00390000018876 ENSGT00390000009456 ENSGT00940000153837.a.b ENSGT00390000007074 ENSGT00940000162291 ENSGT00940000160021 ENSGT00940000156469 ENSGT00940000162646 ENSGT00940000160676 ENSGT00940000153657.B ENSGT00940000159100 ENSGT00940000159496 ENSGT00940000153593.c.b ##22 ENSGT00940000154415 ENSGT00390000003210 ENSGT00390000000707 ENSGT00940000158339 ENSGT00550000074924 ENSGT00940000160924 ENSGT00390000009774 ENSGT00900000141269 ENSGT00940000161431 ENSGT00940000159953.C ENSGT00940000162928 ENSGT00940000161007 ENSGT00390000018560.a.b ENSGT00940000159697 ENSGT00940000153062.A.a.a.a Arabian camel DUPLICATION Arabian camel MODERN SPECIES 15 KCNH1 (ENSCDRG00005019055) HHAT (ENSCDRG00005019106) SERTAD4 (ENSCDRG00005019140) SYT14 (ENSCDRG00005019164) UTP25 (ENSCDRG00005019236) IRF6 (ENSCDRG00005019267) C1orf74 (ENSCDRG00005006685) TRAF3IP3 (ENSCDRG00005006709) HSD11B1 (ENSCDRG00005006991) LAMB3 (ENSCDRG00005007050) ENSCDRG00005007162 CAMK1G (ENSCDRG00005007186) PLXNA2 (ENSCDRG00005007260) ENSCDRG00005007376 ENSCDRG00005007409 ENSCDRG00005007627 ##22 ENSCDRG00005007699 ENSCDRG00005007863 CR2 (ENSCDRG00005008133) ENSCDRG00005008303 CD55 (ENSCDRG00005008350) C4BPA (ENSCDRG00005008485) C4BPB (ENSCDRG00005008532) PFKFB2 (ENSCDRG00005008647) C1orf116 (ENSCDRG00005008886) PIGR (ENSCDRG00005009102) FCMR (ENSCDRG00005009174) IL24 (ENSCDRG00005009389) IL20 (ENSCDRG00005009495) IL19 (ENSCDRG00005009619) IL10 (ENSCDRG00005009710) Arabian camel MODERN SPECIES 35 NUDT19 (ENSCDRG00005020362) TDRD12 (ENSCDRG00005020226) SLC7A9 (ENSCDRG00005019910) CEP89 (ENSCDRG00005019493) FAAP24 (ENSCDRG00005019258) RHPN2 (ENSCDRG00005019052) GPATCH1 (ENSCDRG00005018715) ENSCDRG00005018548 LRP3 (ENSCDRG00005018325) SLC7A10 (ENSCDRG00005018085) CEBPA (ENSCDRG00005017974) CEBPG (ENSCDRG00005017885) PEPD (ENSCDRG00005017266) CHST8 (ENSCDRG00005016814) KCTD15 (ENSCDRG00005016516) ENSCDRG00005016335 ##22 LSM14A (ENSCDRG00005015883) GARRE1 (ENSCDRG00005015403) GPI (ENSCDRG00005015064) PDCD2L (ENSCDRG00005014775) UBA2 (ENSCDRG00005014360) ENSCDRG00005014244 WTIP (ENSCDRG00005014097) ENSCDRG00005013890 ENSCDRG00005013802 ENSCDRG00005013626 ENSCDRG00005013282 ZNF599 (ENSCDRG00005012866) ENSCDRG00005012543 ENSCDRG00005012360 ENSCDRG00005012136 Marsupialia ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Diprotodontia ANCESTRAL SPECIES 54 ENSGT00940000157050 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.c.b ##22 ENSGT00940000153593.c.a #22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00940000167763 ENSGT00410000025695.b #34 Wallaby MODERN SPECIES 9146 KXD1 (ENSMEUG00000013150) #21 ENSMEUG00000013159 ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000153593.c.b ##22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 52 SEC14L2 (ENSVURG00010010922) ENSVURG00010010909 ENSVURG00010010905 SF3A1 (ENSVURG00010010891) TBC1D10A (ENSVURG00010010880) CASTOR1 (ENSVURG00010010845) ENSVURG00010010836 LIF (ENSVURG00010010829) HORMAD2 (ENSVURG00010010819) ENSVURG00010010800 MTMR3 (ENSVURG00010010731) ASCC2 (ENSVURG00010010677) ENSVURG00010010670 ZMAT5 (ENSVURG00010010659) CABP7 (ENSVURG00010010647) ENSVURG00010010643 ##22 NF2 (ENSVURG00010010476) NIPSNAP1 (ENSVURG00010010451) THOC5 (ENSVURG00010010413) AP1B1 (ENSVURG00010010361) RASL10A (ENSVURG00010010348) ENSVURG00010010338 EWSR1 (ENSVURG00010010313) RHBDD3 (ENSVURG00010010302) EMID1 (ENSVURG00010010243) KREMEN1 (ENSVURG00010010195) ENSVURG00010010185 ZNRF3 (ENSVURG00010010166) ENSVURG00010010136 HSCB (ENSVURG00010010060) CHEK2 (ENSVURG00010009950) Common wonbat MODERN SPECIES 36 PNRC1 (ENSVURG00010006394) RNGTT (ENSVURG00010006355) ENSVURG00010006331 AKIRIN2 (ENSVURG00010006300) ORC3 (ENSVURG00010006262) RARS2 (ENSVURG00010006188) SLC35A1 (ENSVURG00010006159) CFAP206 (ENSVURG00010006139) ENSVURG00010006123 SMIM8 (ENSVURG00010006103) ZNF292 (ENSVURG00010006095) ENSVURG00010006077 CGA (ENSVURG00010006057) HTR1E (ENSVURG00010006032) ENSVURG00010006023 ENSVURG00010006007 ##22 SYNCRIP (ENSVURG00010005943) SNX14 (ENSVURG00010005762) NT5E (ENSVURG00010005712) ENSVURG00010005697 ENSVURG00010005656 TBX18 (ENSVURG00010005622) CEP162 (ENSVURG00010005590) CYB5R4 (ENSVURG00010005497) ENSVURG00010005478 SNAP91 (ENSVURG00010005394) PRSS35 (ENSVURG00010005357) ME1 (ENSVURG00010005337) RWDD2A (ENSVURG00010005311) PGM3 (ENSVURG00010005289) DOP1A (ENSVURG00010005218) Amniota ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Mammalia ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Theria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Eulipotyphla ANCESTRAL SPECIES 2498 ENSGT00530000064192 #21 ENSGT00940000153593.d ##22 Common shrew MODERN SPECIES 6322 KXD1 (ENSSARG00000000982) #21 UBA52 (ENSSARG00000000984) ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Ursus ANCESTRAL SPECIES ENSGT00940000153593.d ##22 American black bear MODERN SPECIES 2801 ENSUAMG00000008442 ERI3 (ENSUAMG00000008434) DMAP1 (ENSUAMG00000008428) ENSUAMG00000008427 ##22 ENSUAMG00000008425 Felidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Panthera ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 lion MODERN SPECIES 88 ARHGEF6 (ENSPLOG00000008877) CD40LG (ENSPLOG00000009098) VGLL1 (ENSPLOG00000009146) HTATSF1 (ENSPLOG00000009192) BRS3 (ENSPLOG00000009224) ADGRG4 (ENSPLOG00000009287) MAP7D3 (ENSPLOG00000009510) FHL1 (ENSPLOG00000009599) SLC9A6 (ENSPLOG00000009714) ENSPLOG00000009771 ENSPLOG00000009789 INTS6L (ENSPLOG00000009843) SMIM10 (ENSPLOG00000009944) MOSPD1 (ENSPLOG00000009970) ENSPLOG00000009997 ENSPLOG00000010014 ##22 ENSPLOG00000010039 PABIR2 (ENSPLOG00000010063) PLAC1 (ENSPLOG00000010082) ENSPLOG00000010108 PHF6 (ENSPLOG00000010140) CCDC160 (ENSPLOG00000010192) GPC3 (ENSPLOG00000010226) GPC4 (ENSPLOG00000010319) USP26 (ENSPLOG00000010378) HS6ST2 (ENSPLOG00000010402) MBNL3 (ENSPLOG00000010507) RAP2C (ENSPLOG00000010601) FRMD7 (ENSPLOG00000010646) STK26 (ENSPLOG00000010858) OR13H1 (ENSPLOG00000011050) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Equus ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Horse DUPLICATION Horse MODERN SPECIES 13 RAB3A (ENSECAG00000023115) #8 PDE4C (ENSECAG00000008059) #9 ENSECAG00000032603 #10 ENSECAG00000053894 IQCN (ENSECAG00000010024) #11 LSM4 (ENSECAG00000010141) #13 PGPEP1 (ENSECAG00000011676) #14 GDF15 (ENSECAG00000039579) #15 LRRC25 (ENSECAG00000017682) #16 ISYNA1 (ENSECAG00000019571) #18 SSBP4 (ENSECAG00000017720) #17 ELL (ENSECAG00000000466) #19 FKBP8 (ENSECAG00000012306) #20 KXD1 (ENSECAG00000020539) #21 CRLF1 (ENSECAG00000023854) #25 UBA52 (ENSECAG00000020660) ##22 REX1BD (ENSECAG00000021433) #23 TMEM59L (ENSECAG00000000133) #26 KLHL26 (ENSECAG00000046223) #27 CRTC1 (ENSECAG00000012748) #28 COMP (ENSECAG00000000336) #29 UPF1 (ENSECAG00000010639) #30 GDF1 (ENSECAG00000026851) CERS1 (ENSECAG00000052582) COPE (ENSECAG00000024390) #31 DDX49 (ENSECAG00000012194) #32 HOMER3 (ENSECAG00000023105) #33 SUGP2 (ENSECAG00000000129) #34 ARMC6 (ENSECAG00000006428) #35 SLC25A42 (ENSECAG00000011367) #36 TMEM161A (ENSECAG00000013963) #37 Horse DUPLICATION Horse MODERN SPECIES 5 PRR16 (ENSECAG00000016902) ENSECAG00000001605 FTMT (ENSECAG00000036892) SRFBP1 (ENSECAG00000015330) ENSECAG00000001436 LOX (ENSECAG00000014771) SNCAIP (ENSECAG00000012686) ENSECAG00000012472 SNX2 (ENSECAG00000007426) PPIC (ENSECAG00000006273) SNX24 (ENSECAG00000007403) PRDM6 (ENSECAG00000004532) CEP120 (ENSECAG00000021916) CSNK1G3 (ENSECAG00000019198) ENSECAG00000060272 ENSECAG00000006913 ##22 ZNF608 (ENSECAG00000017943) ENSECAG00000016787 GRAMD2B (ENSECAG00000017800) ALDH7A1 (ENSECAG00000010547) PHAX (ENSECAG00000009967) TEX43 (ENSECAG00000009955) LMNB1 (ENSECAG00000007942) ENSECAG00000057834 ENSECAG00000036855 MARCHF3 (ENSECAG00000007518) C14H5orf63 (ENSECAG00000007492) MEGF10 (ENSECAG00000024752) PRRC1 (ENSECAG00000024659) CTXN3 (ENSECAG00000055448) CCDC192 (ENSECAG00000034646) Horse MODERN SPECIES 25 SEMA3C (ENSECAG00000020113) CD36 (ENSECAG00000015229) GNAT3 (ENSECAG00000020511) GNAI1 (ENSECAG00000000229) ENSECAG00000054218 MAGI2 (ENSECAG00000008564) ENSECAG00000007204 ##22 PHTF2 (ENSECAG00000015920) ENSECAG00000045540 TMEM60 (ENSECAG00000001903) RSBN1L (ENSECAG00000002691) PTPN12 (ENSECAG00000008693) GSAP (ENSECAG00000014974) CCDC146 (ENSECAG00000019177) FAM185A (ENSECAG00000000460) FBXL13 (ENSECAG00000007087) LRRC17 (ENSECAG00000010291) ARMC10 (ENSECAG00000011461) NAPEPLD (ENSECAG00000011986) PMPCB (ENSECAG00000014253) DNAJC2 (ENSECAG00000007573) SLC26A5 (ENSECAG00000006986) Chiroptera ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Greater horseshoe bat MODERN SPECIES 21 PERP (ENSRFEG00010004754) TNFAIP3 (ENSRFEG00010004741) OLIG3 (ENSRFEG00010004731) IFNGR1 (ENSRFEG00010004717) IL22RA2 (ENSRFEG00010004706) IL20RA (ENSRFEG00010004692) ENSRFEG00010004684 SLC35D3 (ENSRFEG00010004673) PEX7 (ENSRFEG00010004663) ENSRFEG00010004658 MAP3K5 (ENSRFEG00010004611) MAP7 (ENSRFEG00010004535) BCLAF1 (ENSRFEG00010004398) MTFR2 (ENSRFEG00010004336) PDE7B (ENSRFEG00010004294) ENSRFEG00010004274 ##22 AHI1 (ENSRFEG00010004178) MYB (ENSRFEG00010004034) HBS1L (ENSRFEG00010003918) ALDH8A1 (ENSRFEG00010003820) SGK1 (ENSRFEG00010003588) SLC2A12 (ENSRFEG00010003467) TBPL1 (ENSRFEG00010003438) TCF21 (ENSRFEG00010003415) EYA4 (ENSRFEG00010003348) ENSRFEG00010003233 SLC18B1 (ENSRFEG00010003181) VNN2 (ENSRFEG00010003139) VNN1 (ENSRFEG00010003067) ENSRFEG00010002997 TAAR5 (ENSRFEG00010002986) Microbat MODERN SPECIES 956 CENPJ (ENSMLUG00000003913) ENSMLUG00000022252 PARP4 (ENSMLUG00000003797) MPHOSPH8 (ENSMLUG00000017661) PSPC1 (ENSMLUG00000017663) ENSMLUG00000028534 ZMYM2 (ENSMLUG00000012333) ENSMLUG00000029529 ENSMLUG00000001601 ENSMLUG00000004903 ENSMLUG00000030582 ZAR1L (ENSMLUG00000010357) FRY (ENSMLUG00000011686) RXFP2 (ENSMLUG00000013834) B3GLCT (ENSMLUG00000012104) ENSMLUG00000023344 ##22 HSPH1 (ENSMLUG00000007926) TEX26 (ENSMLUG00000008800) MEDAG (ENSMLUG00000008786) ENSMLUG00000028124 ALOX5AP (ENSMLUG00000006023) USPL1 (ENSMLUG00000012347) HMGB1 (ENSMLUG00000025979) KATNAL1 (ENSMLUG00000006028) UBL3 (ENSMLUG00000009645) ENSMLUG00000013428 SLC7A1 (ENSMLUG00000014626) ENSMLUG00000014608 Artiodactyla ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cetacea ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Monodontidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Beluga whale MODERN SPECIES 27 ENSDLEG00000005840 MPV17L2 (ENSDLEG00000005851) #7 RAB3A (ENSDLEG00000005860) #8 PDE4C (ENSDLEG00000005873) #9 KIAA1683 (ENSDLEG00000005933) #11 JUND (ENSDLEG00000005939) #12 LSM4 (ENSDLEG00000005942) #13 PGPEP1 (ENSDLEG00000005952) #14 GDF15 (ENSDLEG00000005966) #15 LRRC25 (ENSDLEG00000005971) #16 SSBP4 (ENSDLEG00000005979) #17 ISYNA1 (ENSDLEG00000005989) #18 ELL (ENSDLEG00000006014) #19 FKBP8 (ENSDLEG00000006024) #20 KXD1 (ENSDLEG00000006030) #21 UBA52 (ENSDLEG00000006044) ##22 REX1BD (ENSDLEG00000006050) #23 ENSDLEG00000006057 #24 CRLF1 (ENSDLEG00000006067) #25 TMEM59L (ENSDLEG00000006084) #26 KLHL26 (ENSDLEG00000006086) #27 CRTC1 (ENSDLEG00000006096) #28 COMP (ENSDLEG00000006134) #29 UPF1 (ENSDLEG00000006145) #30 GDF1 (ENSDLEG00000006157) CERS1 (ENSDLEG00000006163) COPE (ENSDLEG00000006169) #31 DDX49 (ENSDLEG00000006176) #32 HOMER3 (ENSDLEG00000006185) #33 SUGP2 (ENSDLEG00000006190) #34 ARMC6 (ENSDLEG00000006199) #35 Pecora ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Yarkand deer MODERN SPECIES 342 ENSCHYG00000010252 ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Caprinae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Goat MODERN SPECIES 2 CALM2 (ENSCHIG00000011230) EPCAM (ENSCHIG00000022999) MSH2 (ENSCHIG00000021960) KCNK12 (ENSCHIG00000009025) MSH6 (ENSCHIG00000014129) FBXO11 (ENSCHIG00000024805) ENSCHIG00000011530 FOXN2 (ENSCHIG00000025720) PPP1R21 (ENSCHIG00000018575) ENSCHIG00000022262 STON1 (ENSCHIG00000013272) GTF2A1L (ENSCHIG00000019307) LHCGR (ENSCHIG00000005935) FSHR (ENSCHIG00000023353) ENSCHIG00000021404 ENSCHIG00000023509 ##22 ENSCHIG00000013329 ENSCHIG00000023901 ENSCHIG00000016778 ENSCHIG00000027041 ASB3 (ENSCHIG00000025413) CHAC2 (ENSCHIG00000016681) ERLEC1 (ENSCHIG00000012003) GPR75 (ENSCHIG00000009039) PSME4 (ENSCHIG00000022596) ENSCHIG00000001765 ENSCHIG00000025445 C2orf73 (ENSCHIG00000022786) SPTBN1 (ENSCHIG00000014950) EML6 (ENSCHIG00000023364) RTN4 (ENSCHIG00000007157) Siberian musk deer MODERN SPECIES 1231 MPV17L2 (ENSMMSG00000021294) #7 RAB3A (ENSMMSG00000021318) #8 PDE4C (ENSMMSG00000021382) #9 ENSMMSG00000021641 #10 ENSMMSG00000021650 #11 JUND (ENSMMSG00000021662) #12 LSM4 (ENSMMSG00000021677) #13 PGPEP1 (ENSMMSG00000021709) #14 GDF15 (ENSMMSG00000021745) #15 LRRC25 (ENSMMSG00000021754) #16 SSBP4 (ENSMMSG00000021774) #17 ISYNA1 (ENSMMSG00000021864) #18 ELL (ENSMMSG00000021935) #19 FKBP8 (ENSMMSG00000021969) #20 KXD1 (ENSMMSG00000021990) #21 ENSMMSG00000022005 ##22 REX1BD (ENSMMSG00000022031) #23 CRLF1 (ENSMMSG00000022062) #25 TMEM59L (ENSMMSG00000022096) #26 KLHL26 (ENSMMSG00000022113) #27 CRTC1 (ENSMMSG00000022161) #28 COMP (ENSMMSG00000022327) #29 UPF1 (ENSMMSG00000022501) #30 GDF1 (ENSMMSG00000022528) CERS1 (ENSMMSG00000022516) COPE (ENSMMSG00000022538) #31 DDX49 (ENSMMSG00000022565) #32 HOMER3 (ENSMMSG00000022598) #33 SUGP2 (ENSMMSG00000022643) #34 ARMC6 (ENSMMSG00000022659) #35 SLC25A42 (ENSMMSG00000022673) #36 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Glires ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Myomorpha ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Muroidea ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cricetidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cricetinae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Golden Hamster MODERN SPECIES 650 Drp2 (ENSMAUG00000017615) Cenpi (ENSMAUG00000001206) Tmem35a (ENSMAUG00000010898) Trmt2b (ENSMAUG00000019081) Xkrx (ENSMAUG00000017694) Nox1 (ENSMAUG00000016770) Cstf2 (ENSMAUG00000000965) Sytl4 (ENSMAUG00000000946) Srpx2 (ENSMAUG00000012454) Tspan6 (ENSMAUG00000010520) Tnmd (ENSMAUG00000017637) Pcdh19 (ENSMAUG00000009556) ENSMAUG00000005459 Diaph2 (ENSMAUG00000000817) ENSMAUG00000007588 ENSMAUG00000008421 ##22 ENSMAUG00000013214 ENSMAUG00000009921 Nap1l3 (ENSMAUG00000021329) ENSMAUG00000008019 Pcdh11x (ENSMAUG00000021322) Trib3 (ENSMAUG00000016011) Rbck1 (ENSMAUG00000015947) Csnk2a1 (ENSMAUG00000022120) Tcf15 (ENSMAUG00000022078) Srxn1 (ENSMAUG00000019700) Scrt2 (ENSMAUG00000021738) Slc52a3 (ENSMAUG00000015206) Fam110a (ENSMAUG00000021554) Angpt4 (ENSMAUG00000012987) Rspo4 (ENSMAUG00000020781) Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Northern American deer mouse MODERN SPECIES 8 ENSPEMG00000000392 ENSPEMG00000030231 ENSPEMG00000028468 Shcbp1 (ENSPEMG00000018747) Slc10a2 (ENSPEMG00000015438) ENSPEMG00000027030 ENSPEMG00000012755 ENSPEMG00000019589 ##22 Efnb2 (ENSPEMG00000029267) ENSPEMG00000019958 ENSPEMG00000029880 ENSPEMG00000027339 Nalf1 (ENSPEMG00000000217) Lig4 (ENSPEMG00000000076) Abhd13 (ENSPEMG00000012812) Tnfsf13b (ENSPEMG00000017940) Myo16 (ENSPEMG00000000246) Irs2 (ENSPEMG00000019911) Col4a1 (ENSPEMG00000019749) Col4a2 (ENSPEMG00000016638) Rab20 (ENSPEMG00000026156) Naxd (ENSPEMG00000020061) Cars2 (ENSPEMG00000019776) Murinae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Mus ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Mus_A ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Mus_B ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Mus_C ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Steppe mouse MODERN SPECIES 3363 Cxcl14 (ENSMSIG00000019603) Neurog1 (ENSMSIG00000019595) ENSMSIG00000019581 Tifab (ENSMSIG00000019578) Macroh2a1 (ENSMSIG00000019507) Pitx1 (ENSMSIG00000019484) Catsper3 (ENSMSIG00000019447) ENSMSIG00000019438 ENSMSIG00000019428 Pcbd2 (ENSMSIG00000019409) Txndc15 (ENSMSIG00000019395) B230219D22Rik (ENSMSIG00000019391) Ddx46 (ENSMSIG00000019031) Caml (ENSMSIG00000019011) B4galt7 (ENSMSIG00000018964) ENSMSIG00000018954 ##22 Tmed9 (ENSMSIG00000018897) Fam193b (ENSMSIG00000018874) Ddx41 (ENSMSIG00000018747) Dok3 (ENSMSIG00000018717) Pdlim7 (ENSMSIG00000018669) Dbn1 (ENSMSIG00000018582) Prr7 (ENSMSIG00000018573) Grk6 (ENSMSIG00000017847) F12 (ENSMSIG00000017816) Pfn3 (ENSMSIG00000017804) Slc34a1 (ENSMSIG00000017772) Rgs14 (ENSMSIG00000017761) Lman2 (ENSMSIG00000017738) Mxd3 (ENSMSIG00000017720) Prelid1 (ENSMSIG00000017709) Rat MODERN SPECIES 11 ENSRNOG00000069676 Fcgr1a (ENSRNOG00000021199) H2bc18 (ENSRNOG00000070591) Hist2h3c2 (ENSRNOG00000063016) Hist1h4b (ENSRNOG00000032224) LOC102549173 (ENSRNOG00000065886) LOC102549173 (ENSRNOG00000068046) ENSRNOG00000062927 Bola1 (ENSRNOG00000021185) Sv2a (ENSRNOG00000021182) Sf3b4 (ENSRNOG00000021181) Mtmr11 (ENSRNOG00000021176) Otud7b (ENSRNOG00000042068) Vps45 (ENSRNOG00000021173) Plekho1 (ENSRNOG00000021170) RGD1562196 (ENSRNOG00000065202) ##22 Anp32e (ENSRNOG00000021168) Car14 (ENSRNOG00000023162) Aph1a (ENSRNOG00000023816) C2H1orf54 (ENSRNOG00000059750) Ciart (ENSRNOG00000042717) Mrps21 (ENSRNOG00000024845) Prpf3 (ENSRNOG00000025629) Rprd2 (ENSRNOG00000054294) Tars2 (ENSRNOG00000057194) Ecm1 (ENSRNOG00000021166) Adamtsl4 (ENSRNOG00000049385) Mcl1 (ENSRNOG00000063678) Ensa (ENSRNOG00000048617) Golph3l (ENSRNOG00000047620) Hormad1 (ENSRNOG00000021160) Rodentia_A ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Marmotini ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Arctic ground squirrel MODERN SPECIES 59 ACBD6 (ENSUPAG00010003972) LHX4 (ENSUPAG00010003955) QSOX1 (ENSUPAG00010003921) CEP350 (ENSUPAG00010003864) ENSUPAG00010003856 ##22 TOR1AIP1 (ENSUPAG00010003787) TOR1AIP2 (ENSUPAG00010003748) FAM163A (ENSUPAG00010003739) TDRD5 (ENSUPAG00010003635) NPHS2 (ENSUPAG00010003620) ENSUPAG00010003596 SOAT1 (ENSUPAG00010003568) ENSUPAG00010003560 ABL2 (ENSUPAG00010003513) TOR3A (ENSUPAG00010003508) FAM20B (ENSUPAG00010003491) ANGPTL1 (ENSUPAG00010003483) RALGPS2 (ENSUPAG00010002884) TEX35 (ENSUPAG00010002849) RASAL2 (ENSUPAG00010002770) Hystricomorpha ANCESTRAL SPECIES 47 ENSGT00390000010450 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000162285 #9 ENSGT00940000156018.A #11 ENSGT00940000162806 #12 ENSGT00610000086173 #13 ENSGT00390000015368.a.a #14 ENSGT00940000161872 #15 ENSGT00390000004001 #16 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.d ##22 ENSGT00940000153593.c.a #22 ENSGT00390000011631 #23 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 ENSGT00940000162169 #29 ENSGT00940000157413 #30 ENSGT00940000162926 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Degu MODERN SPECIES 80 ENSODEG00000010012 CHAMP1 (ENSODEG00000010584) ENSODEG00000009176 CDC16 (ENSODEG00000008438) ENSODEG00000019558 ##22 ENSODEG00000008845 RASA3 (ENSODEG00000008030) C13orf46 (ENSODEG00000007606) GAS6 (ENSODEG00000012335) TMEM255B (ENSODEG00000007605) GRK1 (ENSODEG00000007663) ATP4B (ENSODEG00000007695) ENSODEG00000009187 TMCO3 (ENSODEG00000009661) DCUN1D2 (ENSODEG00000008899) ENSODEG00000007633 ENSODEG00000008619 GRTP1 (ENSODEG00000007871) LAMP1 (ENSODEG00000009126) CUL4A (ENSODEG00000007751) Naked mole-rat female MODERN SPECIES 21 PDE4C (ENSHGLG00000002262) #9 ENSHGLG00000037483 #11 ENSHGLG00000032754 #12 LSM4 (ENSHGLG00000006568) #13 PGPEP1 (ENSHGLG00000006686) #14 GDF15 (ENSHGLG00000032564) #15 LRRC25 (ENSHGLG00000038777) #16 ENSHGLG00000047162 ENSHGLG00000039382 #17 ENSHGLG00000046442 ISYNA1 (ENSHGLG00000010290) #18 ELL (ENSHGLG00000011254) #19 ENSHGLG00000047901 #19 ENSHGLG00000012226 #20 KXD1 (ENSHGLG00000044958) #21 UBA52 (ENSHGLG00000019381) ##22 REX1BD (ENSHGLG00000018788) #23 CRLF1 (ENSHGLG00000006747) #25 TMEM59L (ENSHGLG00000035873) #26 ENSHGLG00000041161 #27 COMP (ENSHGLG00000009575) #29 UPF1 (ENSHGLG00000010900) #30 GDF1 (ENSHGLG00000042377) CERS1 (ENSHGLG00000013716) COPE (ENSHGLG00000006648) #31 ENSHGLG00000006789 #32 HOMER3 (ENSHGLG00000006851) #33 ARMC6 (ENSHGLG00000008147) #35 SLC25A42 (ENSHGLG00000008826) #36 TMEM161A (ENSHGLG00000009517) #37 ENSHGLG00000003123 Primates ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Catarrhini ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Hominoidea ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Hominidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Orangutan MODERN SPECIES PLEKHG5 (ENSPPYG00000001941) NOL9 (ENSPPYG00000001940) TAS1R1 (ENSPPYG00000001939) ZBTB48 (ENSPPYG00000001938) KLHL21 (ENSPPYG00000001937) PHF13 (ENSPPYG00000001936) THAP3 (ENSPPYG00000001935) DNAJC11 (ENSPPYG00000001934) CAMTA1 (ENSPPYG00000001932) PER3 (ENSPPYG00000001930) ENSPPYG00000001929 TNFRSF9 (ENSPPYG00000001926) ENSPPYG00000001925 ERRFI1 (ENSPPYG00000035660) SLC45A1 (ENSPPYG00000001923) ENSPPYG00000001922 ##22 RERE (ENSPPYG00000001921) ENO1 (ENSPPYG00000001920) CA6 (ENSPPYG00000001919) SLC2A7 (ENSPPYG00000001918) SLC2A5 (ENSPPYG00000001917) GPR157 (ENSPPYG00000001916) H6PD (ENSPPYG00000001914) SPSB1 (ENSPPYG00000001913) SLC25A33 (ENSPPYG00000001912) TMEM201 (ENSPPYG00000001911) PIK3CD (ENSPPYG00000001909) CLSTN1 (ENSPPYG00000001908) ENSPPYG00000038753 LZIC (ENSPPYG00000038102) NMNAT1 (ENSPPYG00000033515) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Macaca ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Pig-tailed macaque MODERN SPECIES 554 ENSMNEG00000034538 SEH1L (ENSMNEG00000042897) PTPN2 (ENSMNEG00000033855) PSMG2 (ENSMNEG00000042845) CEP76 (ENSMNEG00000028570) SPIRE1 (ENSMNEG00000038657) PRELID3A (ENSMNEG00000032362) AFG3L2 (ENSMNEG00000012516) TUBB6 (ENSMNEG00000030804) CIDEA (ENSMNEG00000036316) ANKRD62 (ENSMNEG00000033792) ENSMNEG00000036251 PIEZO2 (ENSMNEG00000040869) GNAL (ENSMNEG00000033151) MPPE1 (ENSMNEG00000035283) ENSMNEG00000028719 ##22 IMPA2 (ENSMNEG00000038945) NAPG (ENSMNEG00000042658) APCDD1 (ENSMNEG00000029289) ENSMNEG00000028020 ENSMNEG00000032121 ENSMNEG00000036959 TXNDC2 (ENSMNEG00000035714) ENSMNEG00000039292 RAB31 (ENSMNEG00000031511) PPP4R1 (ENSMNEG00000029461) ENSMNEG00000001867 ENSMNEG00000036996 TWSG1 (ENSMNEG00000030452) ENSMNEG00000044863 ANKRD12 (ENSMNEG00000036122) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Sooty mangabey MODERN SPECIES 507 NUDT9 (ENSCATG00000040205) SPARCL1 (ENSCATG00000045171) DSPP (ENSCATG00000039736) DMP1 (ENSCATG00000035040) IBSP (ENSCATG00000040962) MEPE (ENSCATG00000042357) SPP1 (ENSCATG00000036269) PKD2 (ENSCATG00000043739) ENSCATG00000037267 PPM1K (ENSCATG00000041000) HERC6 (ENSCATG00000045034) HERC5 (ENSCATG00000038271) PYURF (ENSCATG00000043821) NAP1L5 (ENSCATG00000039043) HERC3 (ENSCATG00000018920) ENSCATG00000019340 ##22 FAM13A (ENSCATG00000040672) TIGD2 (ENSCATG00000002008) SNCA (ENSCATG00000029764) MMRN1 (ENSCATG00000020899) CCSER1 (ENSCATG00000042246) ENSCATG00000006292 Platyrrhini ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Capuchin MODERN SPECIES 486 SURF2 (ENSCCAG00000021767) SURF4 (ENSCCAG00000023152) STKLD1 (ENSCCAG00000035466) REXO4 (ENSCCAG00000027049) ADAMTS13 (ENSCCAG00000037675) CACFD1 (ENSCCAG00000030525) SLC2A6 (ENSCCAG00000037488) MYMK (ENSCCAG00000028174) ADAMTSL2 (ENSCCAG00000021833) FAM163B (ENSCCAG00000013948) DBH (ENSCCAG00000024257) SARDH (ENSCCAG00000027795) VAV2 (ENSCCAG00000028423) BRD3OS (ENSCCAG00000008444) BRD3 (ENSCCAG00000026555) ENSCCAG00000023248 ##22 WDR5 (ENSCCAG00000027270) RXRA (ENSCCAG00000032024) COL5A1 (ENSCCAG00000035174) FCN2 (ENSCCAG00000025129) OLFM1 (ENSCCAG00000012661) C9orf116 (ENSCCAG00000033105) MRPS2 (ENSCCAG00000031563) ENSCCAG00000029272 ENSCCAG00000034303 PAEP (ENSCCAG00000027279) Bolivian squirrel monkey MODERN SPECIES 50 TOMT (ENSSBOG00000033709) ENSSBOG00000035680 FOLR2 (ENSSBOG00000030720) ENSSBOG00000027615 FOLR1 (ENSSBOG00000032792) INPPL1 (ENSSBOG00000028042) PHOX2A (ENSSBOG00000019317) CLPB (ENSSBOG00000031007) PDE2A (ENSSBOG00000035008) ARAP1 (ENSSBOG00000031716) STARD10 (ENSSBOG00000022143) ATG16L2 (ENSSBOG00000027588) FCHSD2 (ENSSBOG00000018307) ENSSBOG00000023173 ENSSBOG00000027673 ENSSBOG00000027043 ##22 P2RY2 (ENSSBOG00000010684) ARHGEF17 (ENSSBOG00000024564) RELT (ENSSBOG00000027236) FAM168A (ENSSBOG00000005248) PLEKHB1 (ENSSBOG00000033986) RAB6A (ENSSBOG00000028389) ENSSBOG00000014336 ENSSBOG00000028791 PAAF1 (ENSSBOG00000022025) ENSSBOG00000026075 DNAJB13 (ENSSBOG00000022356) UCP2 (ENSSBOG00000028197) UCP3 (ENSSBOG00000019272) C2CD3 (ENSSBOG00000023741) PPME1 (ENSSBOG00000031236) Marmoset DUPLICATION Marmoset MODERN SPECIES 2 STX5 (ENSCJAG00000018606) TEX54 (ENSCJAG00000047769) ENSCJAG00000018581 ENSCJAG00000018569 CHRM1 (ENSCJAG00000018561) ENSCJAG00000080197 SLC22A6 (ENSCJAG00000018534) SLC22A8 (ENSCJAG00000046805) ENSCJAG00000043818 SLC22A10 (ENSCJAG00000018512) PLAAT5 (ENSCJAG00000038446) LGALS12 (ENSCJAG00000018504) PLAAT4 (ENSCJAG00000018491) PLAAT2 (ENSCJAG00000018481) PLAAT3 (ENSCJAG00000018470) ENSCJAG00000033686 ##22 ATL3 (ENSCJAG00000018444) RTN3 (ENSCJAG00000018422) ZFTA (ENSCJAG00000047167) SPINDOC (ENSCJAG00000018418) MARK2 (ENSCJAG00000018341) RCOR2 (ENSCJAG00000018326) NAA40 (ENSCJAG00000018311) COX8A (ENSCJAG00000074447) OTUB1 (ENSCJAG00000018269) MACROD1 (ENSCJAG00000018256) FLRT1 (ENSCJAG00000055401) STIP1 (ENSCJAG00000018209) FERMT3 (ENSCJAG00000018177) TRPT1 (ENSCJAG00000018169) NUDT22 (ENSCJAG00000018163) Marmoset MODERN SPECIES 14 MPV17L2 (ENSCJAG00000014104) #7 PDE4C (ENSCJAG00000042536) #9 ENSCJAG00000071787 ENSCJAG00000065876 #10 IQCN (ENSCJAG00000014148) #11 JUND (ENSCJAG00000059058) #12 ENSCJAG00000014171 PGPEP1 (ENSCJAG00000014176) #14 GDF15 (ENSCJAG00000048614) #15 ENSCJAG00000000915 #16 SSBP4 (ENSCJAG00000014185) #17 ENSCJAG00000014230 #18 ELL (ENSCJAG00000015279) #19 FKBP8 (ENSCJAG00000039606) #20 KXD1 (ENSCJAG00000007479) #21 ENSCJAG00000053720 ##22 ENSCJAG00000007459 #23 CRLF1 (ENSCJAG00000007427) #25 TMEM59L (ENSCJAG00000007447) #26 KLHL26 (ENSCJAG00000007445) #27 CRTC1 (ENSCJAG00000007421) #28 COMP (ENSCJAG00000001175) #29 UPF1 (ENSCJAG00000019627) #30 CERS1 (ENSCJAG00000019660) COPE (ENSCJAG00000019706) #31 DDX49 (ENSCJAG00000042114) #32 HOMER3 (ENSCJAG00000080144) #33 SUGP2 (ENSCJAG00000019714) #34 ARMC6 (ENSCJAG00000019747) #35 SLC25A42 (ENSCJAG00000044017) #36 TMEM161A (ENSCJAG00000019759) #37 Sauria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Episquamata ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Toxicofera ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Elapidae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Blue-lipped sea krait MODERN SPECIES 3649 UBA52 (ENSLLTG00000000952) ##22 Archelosauria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Archosauria ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Aves ANCESTRAL SPECIES ENSGT00940000153593.d ##22 African ostrich MODERN SPECIES 178 ELL (ENSSCUG00000001820) #19 KXD1 (ENSSCUG00000001826) #21 UBA52 (ENSSCUG00000001828) ##22 Neognathae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Galloanserae ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Anatidae ANCESTRAL SPECIES 71 ENSGT00390000018395.r #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593.d ##22 ENSGT00940000166035 ENSGT00940000156569.a.b #25 ENSGT00390000008279.b #26 ENSGT00940000159238.b #27 ENSGT00390000010652.D.b #28 ENSGT00940000155227 ENSGT00940000157413 #30 ENSGT00940000164416 ENSGT01030000234515.b ENSGT00390000003478 #31 ENSGT00730000111231 #32 ENSGT00940000158081 #33 ENSGT00410000025695.b #34 ENSGT00390000002913 #35 ENSGT00940000158163 #36 Pink-footed goose MODERN SPECIES 308 ISYNA1 (ENSABRG00000005435) #18 ELL (ENSABRG00000005411) #19 FKBP8 (ENSABRG00000005403) #20 KXD1 (ENSABRG00000005399) #21 UBA52 (ENSABRG00000005391) ##22 CRLF1 (ENSABRG00000005385) #25 TMEM59L (ENSABRG00000005381) #26 KLHL26 (ENSABRG00000005372) #27 CRTC1 (ENSABRG00000005352) #28 ENSABRG00000005294 UPF1 (ENSABRG00000003691) #30 ENSABRG00000003615 CERS1 (ENSABRG00000003583) COPE (ENSABRG00000003553) #31 DDX49 (ENSABRG00000003533) #32 HOMER3 (ENSABRG00000003480) #33 SUGP2 (ENSABRG00000003433) #34 ARMC6 (ENSABRG00000003410) #35 SLC25A42 (ENSABRG00000003394) #36 TMEM161A (ENSABRG00000003380) #37 Neognathae_b ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Passeriformes ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Passeriformes_d ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Passeroidea ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Zebra finch MODERN SPECIES 21 ENSTGUG00000022040 #17 ENSTGUG00000001021 MPV17L2 (ENSTGUG00000001023) #7 ENSTGUG00000024891 #8 ENSTGUG00000028110 ENSTGUG00000019522 LSM4 (ENSTGUG00000001027) ENSTGUG00000028194 #14 ENSTGUG00000025087 #15 ENSTGUG00000022226 ENSTGUG00000026522 #17 ISYNA1 (ENSTGUG00000029076) #18 ELL (ENSTGUG00000001031) #19 FKBP8 (ENSTGUG00000001043) #20 KXD1 (ENSTGUG00000001051) #21 UBA52 (ENSTGUG00000024751) ##22 ENSTGUG00000028566 CRLF1 (ENSTGUG00000001061) #25 TMEM59L (ENSTGUG00000020934) #26 KLHL26 (ENSTGUG00000001064) #27 CRTC1 (ENSTGUG00000001067) #28 ENSTGUG00000014102 UPF1 (ENSTGUG00000001057) #30 ENSTGUG00000028778 CERS1 (ENSTGUG00000014035) ENSTGUG00000029565 #31 DDX49 (ENSTGUG00000001072) #32 HOMER3 (ENSTGUG00000001080) #33 SUGP2 (ENSTGUG00000001088) #34 ARMC6 (ENSTGUG00000001090) #35 SLC25A42 (ENSTGUG00000020561) #36 Neognathae_c ANCESTRAL SPECIES ENSGT00940000153593.d ##22 Golden eagle MODERN SPECIES 3 MAST3 (ENSACCG00020006703) PIK3R2 (ENSACCG00020006658) IFI30 (ENSACCG00020006634) MPV17L2 (ENSACCG00020006616) #7 RAB3A (ENSACCG00020006602) #8 ENSACCG00020006565 JUND (ENSACCG00020006540) #12 LSM4 (ENSACCG00020006528) #13 PGPEP1 (ENSACCG00020006516) #14 ENSACCG00020006502 SSBP4 (ENSACCG00020006329) #17 ISYNA1 (ENSACCG00020006198) #18 ELL (ENSACCG00020006177) #19 FKBP8 (ENSACCG00020006152) #20 KXD1 (ENSACCG00020006135) #21 UBA52 (ENSACCG00020006118) ##22 ENSACCG00020006101 ENSACCG00020006087 ##25 TMEM59L (ENSACCG00020006064) #26 KLHL26 (ENSACCG00020006048) #27 CRTC1 (ENSACCG00020006031) #28 ENSACCG00020005982 UPF1 (ENSACCG00020005946) #30 ENSACCG00020005919 CERS1 (ENSACCG00020005915) COPE (ENSACCG00020005888) #31 DDX49 (ENSACCG00020005865) #32 HOMER3 (ENSACCG00020005833) #33 SUGP2 (ENSACCG00020005795) #34 ARMC6 (ENSACCG00020005768) #35 SLC25A42 (ENSACCG00020005755) #36 Anura ANCESTRAL SPECIES 247 ENSGT00950000185433 ENSGT00940000165458 ENSGT00950000183049.C #17 ENSGT00390000018395 #18 ENSGT00940000155914 #19 ENSGT00940000156705 #20 ENSGT00530000064192 #21 ENSGT00940000153593 #22 ENSGT00940000166035 ENSGT00390000008279.b #26 ENSGT00940000159238 #27 ENSGT00390000010652.D.b #28 Leishan spiny toad MODERN SPECIES ENSLLEG00000006675 ENSLLEG00000006656 ENSLLEG00000006624 ENSLLEG00000006603 ARHGEF18 (ENSLLEG00000006272) ENSLLEG00000006216 ENSLLEG00000006144 ENSLLEG00000006095 ENSLLEG00000006080 SSBP4 (ENSLLEG00000006006) #17 ISYNA1 (ENSLLEG00000005823) #18 ELL (ENSLLEG00000005713) #19 FKBP8 (ENSLLEG00000005660) #20 KXD1 (ENSLLEG00000005623) #21 ENSLLEG00000005605 UBA52 (ENSLLEG00000005502) #22 ENSLLEG00000005392 CRLF1 (ENSLLEG00000005259) ##25 ENSLLEG00000005237 ENSLLEG00000005228 TMEM59L (ENSLLEG00000005210) #26 KLHL26 (ENSLLEG00000005148) #27 ENSLLEG00000003725 ENSLLEG00000003715 CRTC1 (ENSLLEG00000003671) #28 ENSLLEG00000003639 ENSLLEG00000003579 ENSLLEG00000003558 ENSLLEG00000003355 ENSLLEG00000003291 GAK (ENSLLEG00000003097) Frog MODERN SPECIES rnf126 (ENSXETG00000006543) ENSXETG00000041709 fstl3 (ENSXETG00000022970) prtn3-like.2 (ENSXETG00000038551) gdf15 (ENSXETG00000045808) #15 ENSXETG00000035130 chchd10 (ENSXETG00000022956) ENSXETG00000043688 ENSXETG00000022948 ssbp4 (ENSXETG00000022940) #17 isyna1 (ENSXETG00000022938) #18 ell (ENSXETG00000023213) #19 fkbp8 (ENSXETG00000023205) #20 ENSXETG00000044111 kxd1 (ENSXETG00000023203) #21 uba52 (ENSXETG00000023202) #22 rex1bd (ENSXETG00000023201) ENSXETG00000048394 crlf1 (ENSXETG00000023198) ##25 tmem59l (ENSXETG00000011196) #26 klhl26 (ENSXETG00000030062) #27 crtc1 (ENSXETG00000011199) #28 comp (ENSXETG00000011202) ENSXETG00000039753 parp14.3 (ENSXETG00000045410) ENSXETG00000048057 adh6 (ENSXETG00000010166) stra6l.1 (ENSXETG00000038195) tdrd7 (ENSXETG00000010171) tmod1 (ENSXETG00000010173) tstd2 (ENSXETG00000010177) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1330 SYK (ENSLACG00000011436) AUH (ENSLACG00000007123) NFIL3 (ENSLACG00000006631) uba52 (ENSLACG00000003456) #22 ROR2 (ENSLACG00000001341) Coelacanth MODERN SPECIES 1195 TMEM161A (ENSLACG00000011298) #37 SLC25A42 (ENSLACG00000010791) #36 ARMC6 (ENSLACG00000010594) #35 SUGP2 (ENSLACG00000010085) #34 ENSLACG00000009677 HOMER3 (ENSLACG00000008840) #33 uba52 (ENSLACG00000008132) #22 rex1bd (ENSLACG00000007836) CRLF1 (ENSLACG00000007457) ##25 TMEM59L (ENSLACG00000006677) #26 KLHL26 (ENSLACG00000005947) #27 CRTC1 (ENSLACG00000004626) #28 ENSLACG00000002929 Actinopterygii ANCESTRAL SPECIES 226 ENSGT00940000159560 ENSGT00940000153593 #22 ENSGT00940000158081 #33 ENSGT00730000111231 #32 ENSGT00940000157413 #30 ENSGT00940000166148 ENSGT00390000010652.D.a.a ##28 ENSGT00940000159238 #27 ENSGT00950000185433 ENSGT00940000157166 ENSGT00940000157050 ENSGT00940000164804 ENSGT00940000160620 #7 ENSGT00940000158959.b #8 ENSGT00940000164492 ENSGT00940000162806 #12 ENSGT00610000086173 #13 Neopterygii ANCESTRAL SPECIES 115 ENSGT00940000160384 ENSGT00940000154539.a.b ENSGT00940000161439 ENSGT00390000015467 ENSGT00940000157017.b ENSGT00940000160899 ENSGT01040000240503.A.a.b ENSGT00390000002390.a ENSGT00940000161989 ENSGT00390000006565 ENSGT00390000018061 ENSGT00940000156757 ENSGT00940000159994 ENSGT00940000177177 ENSGT00730000113192 ENSGT00940000153593 #22 ENSGT00940000158081 #33 ENSGT00730000111231 #32 ENSGT00940000157413 #30 ENSGT00390000015368.a.a #14 ENSGT00610000086173 #13 ENSGT00940000162806 #12 ENSGT00740000117196 ENSGT00940000164492 ENSGT00940000158959.b #8 ENSGT00940000160620 #7 ENSGT00940000164804 ENSGT00390000010450 ENSGT00940000157050 ENSGT00940000157166 ENSGT00940000155603.A.a Spotted gar MODERN SPECIES 657 ABCA7 (ENSLOCG00000002469) ENSLOCG00000002459 r3hdm4 (ENSLOCG00000002423) ENSLOCG00000002413 ARID3A (ENSLOCG00000002384) ENSLOCG00000002346 ENSLOCG00000002336 PCSK4 (ENSLOCG00000002313) ndufs7 (ENSLOCG00000002302) gamt (ENSLOCG00000002281) dazap1 (ENSLOCG00000002243) rps15 (ENSLOCG00000002230) arrdc2 (ENSLOCG00000002205) ENSLOCG00000002192 ENSLOCG00000002176 uba52 (ENSLOCG00000002162) #22 homer3b (ENSLOCG00000002136) #33 ddx49 (ENSLOCG00000002119) #32 upf1 (ENSLOCG00000002072) #30 pgpep1 (ENSLOCG00000002042) #14 lsm4 (ENSLOCG00000002025) #13 jund (ENSLOCG00000017628) #12 ENSLOCG00000002011 ENSLOCG00000001972 rab3ab (ENSLOCG00000001958) #8 mpv17l2 (ENSLOCG00000001941) #7 ifi30 (ENSLOCG00000001914) ENSLOCG00000001904 DAPK3 (ENSLOCG00000001875) wdr18 (ENSLOCG00000001858) GRIN3B (ENSLOCG00000001847) Osteoglossocephalai ANCESTRAL SPECIES 32 ENSGT00950000183096.a.b ENSGT00940000161837.c.a ENSGT00940000154739.B ENSGT00940000160580.b ENSGT00940000160280 ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00390000001700.b ENSGT00400000024256 ENSGT01030000236342 ENSGT00940000159994 ENSGT00940000177177 ENSGT00730000113192 ENSGT00940000153593 #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00610000086173 #13 ENSGT00940000162806 #12 ENSGT00940000160620 #7 ENSGT00940000164804 ENSGT00940000157050.i.b ENSGT00940000157166.c ENSGT01030000235156 ENSGT00390000010652.D.a.a ##28 ENSGT00940000166148 ENSGT00390000018845.f ENSGT00390000014626 Clupeocephala ANCESTRAL SPECIES 38 ENSGT00530000064649 ENSGT01050000244924.a.a.b.a.a ENSGT00940000175337 ENSGT00940000154739.B ENSGT00940000160580.a ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT01030000236342 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00730000113192 ENSGT00940000153593 #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.b.a #8 Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES 741 ENSGT00730000113192 ENSGT00940000153593.e.a #22 Protacanthopterygii ANCESTRAL SPECIES 13 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000160221.c ENSGT00940000154739.B ENSGT00940000160580.a ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00390000001700.b.h ENSGT00400000024256 ENSGT00940000161753 ENSGT01030000236342 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00730000113192 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a.b ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000157166.c ENSGT01030000235156 Salmoninae ANCESTRAL SPECIES 340 ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.b ENSGT00940000165866.p.b.a ENSGT00940000159994.g ENSGT00940000177177 ENSGT00940000153593.e.b.g.b #22 ENSGT00730000113192 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000177302 Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000160221.c.e ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.b ENSGT00940000165866.p.b.a ENSGT00940000159994.g ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00730000113192 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000164492.a.b.e ENSGT00940000164804.b.g ENSGT00940000157050.i.b.a ENSGT00940000157166.c.e ENSGT01030000235156.c Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000160221.c.e ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.b ENSGT00940000165866.p.b.a ENSGT00940000159994.g ENSGT00730000113192 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000164492.a.b.e ENSGT00940000164804.b.g ENSGT00940000157050.i.b.a ENSGT00940000157166.c.e ENSGT01030000235156.c ENSGT00940000159238.m #27 ENSGT00390000010652.D.a.a.b ##28 Rainbow trout MODERN SPECIES palm1a (ENSOMYG00000000376) ENSOMYG00000059647 med16 (ENSOMYG00000000511) ENSOMYG00000000606 ENSOMYG00000000641 ENSOMYG00000000650 ENSOMYG00000000662 ENSOMYG00000000683 ENSOMYG00000070910 ENSOMYG00000072209 ENSOMYG00000050360 ENSOMYG00000060530 ENSOMYG00000049809 ENSOMYG00000000713 ENSOMYG00000049916 ENSOMYG00000000730 #22 ENSOMYG00000000747 #33 ddx49 (ENSOMYG00000000821) #32 ENSOMYG00000000851 #30 PGPEP1 (ENSOMYG00000000872) #14 lsm4 (ENSOMYG00000000879) #13 JUND (ENSOMYG00000000886) #12 ENSOMYG00000000904 ##8 ENSOMYG00000000911 #7 ENSOMYG00000051812 ENSOMYG00000001565 ENSOMYG00000070388 ENSOMYG00000002025 ENSOMYG00000002896 ENSOMYG00000003919 ENSOMYG00000004082 Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000175916 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000160221.c.e ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.a ENSGT00940000159994.g ENSGT00730000113192 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000164492.a.b.e ENSGT00940000164804.b.g ENSGT00940000157050.i.b.a ENSGT00940000157166.c.e ENSGT01030000235156.c ENSGT00940000159238.m #27 ENSGT00390000010652.D.a.a.b ##28 Chinook salmon MODERN SPECIES 30 ENSOTSG00005031617 ENSOTSG00005031622 palm1a (ENSOTSG00005031628) PLPPR3 (ENSOTSG00005031684) med16 (ENSOTSG00005031687) TMEM259 (ENSOTSG00005031699) GRIN3B (ENSOTSG00005031782) wdr18 (ENSOTSG00005031783) ENSOTSG00005031784 ifi44f1 (ENSOTSG00005031786) ENSOTSG00005031788 ENSOTSG00005031789 ENSOTSG00005031791 arrdc2 (ENSOTSG00005031792) ENSOTSG00005031793 uba52 (ENSOTSG00005031794) #22 homer3b (ENSOTSG00005031796) #33 ddx49 (ENSOTSG00005031797) #32 upf1 (ENSOTSG00005031798) #30 PGPEP1 (ENSOTSG00005031799) #14 lsm4 (ENSOTSG00005031802) #13 JUND (ENSOTSG00005031804) #12 RAB3A (ENSOTSG00005031806) ##8 MPV17L2 (ENSOTSG00005031809) #7 ENSOTSG00005031814 ENSOTSG00005031818 ENSOTSG00005031819 PIK3R2 (ENSOTSG00005031830) MAST3 (ENSOTSG00005034278) ENSOTSG00005034286 klhl26 (ENSOTSG00005034289) #27 Coho salmon MODERN SPECIES 24 ENSOKIG00005031168 CARTPT (ENSOKIG00005031207) ENSOKIG00005031253 ENSOKIG00005031267 palm1a (ENSOKIG00005031293) PLPPR3 (ENSOKIG00005031317) med16 (ENSOKIG00005031369) TMEM259 (ENSOKIG00005031598) GRIN3B (ENSOKIG00005031643) wdr18 (ENSOKIG00005031651) ENSOKIG00005031683 ifi44f1 (ENSOKIG00005031697) ENSOKIG00005031711 ARRDC2 (ENSOKIG00005031741) ENSOKIG00005031773 uba52 (ENSOKIG00005031780) #22 HOMER3 (ENSOKIG00005031801) #33 ddx49 (ENSOKIG00005031900) #32 UPF1 (ENSOKIG00005032035) #30 PGPEP1 (ENSOKIG00005032293) #14 lsm4 (ENSOKIG00005032321) #13 JUND (ENSOKIG00005032332) #12 RAB3A (ENSOKIG00005032340) ##8 MPV17L2 (ENSOKIG00005032384) #7 ENSOKIG00005032402 ENSOKIG00005032501 ENSOKIG00005032508 PIK3R2 (ENSOKIG00005032559) MAST3 (ENSOKIG00005033748) ENSOKIG00005034280 klhl26 (ENSOKIG00005034295) #27 Acanthomorphata ANCESTRAL SPECIES 56 ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00940000160615.b.c.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b Tiger tail seahorse MODERN SPECIES 242 dda1 (ENSHCOG00000007592) ABHD8 (ENSHCOG00000007615) ENSHCOG00000007623 nek7 (ENSHCOG00000007642) lhx9 (ENSHCOG00000007658) si:dkey-121a9.3 (ENSHCOG00000007661) ENSHCOG00000007674 ENSHCOG00000007682 ENSHCOG00000007693 crb1 (ENSHCOG00000000579) ENSHCOG00000007882 fam163ab (ENSHCOG00000007889) RABGAP1L (ENSHCOG00000007932) arrdc2 (ENSHCOG00000007944) ENSHCOG00000007957 #27 uba52 (ENSHCOG00000007963) #22 homer3b (ENSHCOG00000007991) #33 klhl26 (ENSHCOG00000008013) #27 klhl26 (ENSHCOG00000008042) #27 CRTC1 (ENSHCOG00000008053) ##28 comp (ENSHCOG00000008106) tmem38a (ENSHCOG00000008120) smim7 (ENSHCOG00000008127) slc35e1 (ENSHCOG00000008139) ENSHCOG00000008152 ENSHCOG00000008158 pex11g (ENSHCOG00000008204) APBA3 (ENSHCOG00000008269) ABCA7 (ENSHCOG00000008405) r3hdm4 (ENSHCOG00000008422) ARID3A (ENSHCOG00000008439) Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b Ovalentaria ANCESTRAL SPECIES 9 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Cichlidae ANCESTRAL SPECIES 17 ENSGT00940000163581.f.a.g ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000163581.f.a.g.a.a ENSGT00940000163581.f.a.g.a.b ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000163581.f.a.g.a.a ENSGT00940000163581.f.a.g.a.b ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b.a ENSGT00940000157050.i.b ENSGT00940000154886.a.a Lyretail cichlid MODERN SPECIES 513 gys2 (ENSNBRG00000020985) ENSNBRG00000021008 LDHB (ENSNBRG00000021027) slc25a3b (ENSNBRG00000021063) ENSNBRG00000021090 strap (ENSNBRG00000021126) ENSNBRG00000021149 large1 (ENSNBRG00000021198) ENSNBRG00000021454 ENSNBRG00000021612 ENSNBRG00000021762 ENSNBRG00000021847 ENSNBRG00000021865 arrdc2 (ENSNBRG00000021928) ENSNBRG00000021949 uba52 (ENSNBRG00000021959) #22 homer3b (ENSNBRG00000021966) #33 ddx49 (ENSNBRG00000022025) #32 upf1 (ENSNBRG00000022069) #30 PGPEP1 (ENSNBRG00000022136) #14 lsm4 (ENSNBRG00000022150) #13 RNF213 (ENSNBRG00000022361) Haplochromini ANCESTRAL SPECIES 23 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000163581.f.a.g.a.b.b ENSGT00940000163581.f.a.g.a.a ENSGT00940000163581.f.a.g.a.b.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B.h ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b.a ENSGT00940000157050.i.b ENSGT00940000154886.a.a Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000163581.f.a.g.a.b.b ENSGT00940000163581.f.a.g.a.a ENSGT00940000163581.f.a.g.a.b.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B.h ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b.a ENSGT00940000157050.i.b ENSGT00940000154886.a.a P. nyererei MODERN SPECIES 331 recql (ENSPNYG00000016013) golt1ba (ENSPNYG00000016039) gys2 (ENSPNYG00000016062) ENSPNYG00000016105 LDHB (ENSPNYG00000016114) slc25a3b (ENSPNYG00000016123) ENSPNYG00000016167 strap (ENSPNYG00000016212) ENSPNYG00000016241 large1 (ENSPNYG00000016281) ENSPNYG00000016324 ENSPNYG00000016375 ENSPNYG00000016508 ENSPNYG00000016531 arrdc2 (ENSPNYG00000016577) uba52 (ENSPNYG00000016614) #22 homer3b (ENSPNYG00000016638) #33 ddx49 (ENSPNYG00000016672) #32 upf1 (ENSPNYG00000016731) #30 PGPEP1 (ENSPNYG00000016781) #14 lsm4 (ENSPNYG00000016794) #13 ENSPNYG00000016806 RNF213 (ENSPNYG00000016824) ENSPNYG00000016862 ENSPNYG00000016888 ENSPNYG00000016922 JUND (ENSPNYG00000016948) #12 RAB3A (ENSPNYG00000016958) ##8 mpv17l2 (ENSPNYG00000016973) #7 ENSPNYG00000017013 ENSPNYG00000017124 Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000163581.f.a.g.a.b.b ENSGT00940000163581.f.a.g.a.a ENSGT00940000163581.f.a.g.a.b.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B.h ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b.a ENSGT00940000157050.i.b ENSGT00940000154886.a.a Zebra mbuna MODERN SPECIES 1097 gys2 (ENSMZEG00005016045) ENSMZEG00005016083 LDHB (ENSMZEG00005016089) ENSMZEG00005016102 slc25a3b (ENSMZEG00005016106) tmpoa (ENSMZEG00005016121) strap (ENSMZEG00005016130) ENSMZEG00005016150 large1 (ENSMZEG00005016166) ENSMZEG00005016170 ENSMZEG00005016191 ENSMZEG00005016298 ENSMZEG00005016305 ENSMZEG00005016318 arrdc2 (ENSMZEG00005016330) uba52 (ENSMZEG00005016348) #22 homer3b (ENSMZEG00005016352) #33 ddx49 (ENSMZEG00005016366) #32 upf1 (ENSMZEG00005016386) #30 PGPEP1 (ENSMZEG00005016414) #14 lsm4 (ENSMZEG00005016420) #13 ENSMZEG00005016429 ENSMZEG00005016461 JUND (ENSMZEG00005016474) #12 RAB3A (ENSMZEG00005016480) ##8 mpv17l2 (ENSMZEG00005016485) #7 ENSMZEG00005016516 ENSMZEG00005016600 PIK3R2 (ENSMZEG00005016715) kank3 (ENSMZEG00005016722) dpp9 (ENSMZEG00005016729) Eastern happy MODERN SPECIES 6 ENSACLG00000021597 LDHB (ENSACLG00000021613) slc25a3b (ENSACLG00000021624) tmpoa (ENSACLG00000021671) strap (ENSACLG00000021696) ENSACLG00000021803 large1 (ENSACLG00000021893) ENSACLG00000021939 ENSACLG00000021946 ENSACLG00000021954 ENSACLG00000021969 ENSACLG00000022141 ENSACLG00000022167 ENSACLG00000022198 arrdc2 (ENSACLG00000022233) uba52 (ENSACLG00000022262) #22 homer3b (ENSACLG00000022283) #33 ENSACLG00000022523 ddx49 (ENSACLG00000022538) #32 upf1 (ENSACLG00000022630) #30 PGPEP1 (ENSACLG00000022719) #14 lsm4 (ENSACLG00000022738) #13 ENSACLG00000022747 ENSACLG00000022763 ENSACLG00000022796 JUND (ENSACLG00000022830) #12 RAB3A (ENSACLG00000022842) ##8 mpv17l2 (ENSACLG00000022858) #7 ENSACLG00000022919 ENSACLG00000022971 ENSACLG00000022992 Burton s mouthbrooder MODERN SPECIES 927 ENSHBUG00000009125 arrdc2 (ENSHBUG00000009097) uba52 (ENSHBUG00000009052) #22 homer3b (ENSHBUG00000009035) #33 ddx49 (ENSHBUG00000008991) #32 upf1 (ENSHBUG00000008939) #30 PGPEP1 (ENSHBUG00000008872) #14 lsm4 (ENSHBUG00000008858) #13 ENSHBUG00000008843 ENSHBUG00000008837 Pomacentridae ANCESTRAL SPECIES 16 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a Spiny chromis MODERN SPECIES 669 ENSAPOG00000011321 ENSAPOG00000011238 ENSAPOG00000011221 ENSAPOG00000011126 ENSAPOG00000011103 ENSAPOG00000000897 ENSAPOG00000000309 ENSAPOG00000011072 arrdc2 (ENSAPOG00000011057) ENSAPOG00000011021 uba52 (ENSAPOG00000011014) #22 homer3b (ENSAPOG00000010991) #33 ddx49 (ENSAPOG00000010961) #32 upf1 (ENSAPOG00000010916) #30 Amphiprion ANCESTRAL SPECIES 2 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00510000053055 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Orange clownfish MODERN SPECIES 11 ENSAPEG00000007190 nek7 (ENSAPEG00000007129) lhx9 (ENSAPEG00000007102) si:dkey-121a9.3 (ENSAPEG00000007089) DENND1B (ENSAPEG00000006992) crb1 (ENSAPEG00000006836) axdnd1 (ENSAPEG00000006748) nphs2 (ENSAPEG00000006729) ENSAPEG00000006682 fam163ab (ENSAPEG00000006672) RABGAP1L (ENSAPEG00000006591) ifi44f1 (ENSAPEG00000006547) ENSAPEG00000006523 ENSAPEG00000006495 arrdc2 (ENSAPEG00000006466) uba52 (ENSAPEG00000006450) #22 homer3b (ENSAPEG00000006418) #33 ddx49 (ENSAPEG00000006367) #32 upf1 (ENSAPEG00000006292) #30 PGPEP1 (ENSAPEG00000006250) #14 lsm4 (ENSAPEG00000006238) #13 JUND (ENSAPEG00000006214) #12 RAB3A (ENSAPEG00000006195) ##8 mpv17l2 (ENSAPEG00000006183) #7 ENSAPEG00000006175 ENSAPEG00000006111 ENSAPEG00000005628 ENSAPEG00000005514 ENSAPEG00000005475 kank3 (ENSAPEG00000005457) ENSAPEG00000005408 Clown anemonefish MODERN SPECIES 253 ENSAOCG00000006076 ENSAOCG00000006087 arrdc2 (ENSAOCG00000006142) ENSAOCG00000006158 uba52 (ENSAOCG00000006176) #22 homer3b (ENSAOCG00000006203) #33 ddx49 (ENSAOCG00000006257) #32 upf1 (ENSAOCG00000006352) #30 PGPEP1 (ENSAOCG00000006393) #14 lsm4 (ENSAOCG00000006414) #13 JUND (ENSAOCG00000006432) #12 RAB3A (ENSAOCG00000006464) ##8 mpv17l2 (ENSAOCG00000006479) #7 ENSAOCG00000006488 ENSAOCG00000006530 ENSAOCG00000006593 ENSAOCG00000006609 ENSAOCG00000006648 kank3 (ENSAOCG00000006660) ENSAOCG00000006685 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Turquoise killifish MODERN SPECIES 1626 LHX9 (ENSNFUG00015018152) C22H1ORF53 (ENSNFUG00015018164) DENND1B (ENSNFUG00015018168) crb1 (ENSNFUG00015018172) axdnd1 (ENSNFUG00015018192) nphs2 (ENSNFUG00015018201) ENSNFUG00015018207 FAM163A (ENSNFUG00015018223) RABGAP1L (ENSNFUG00015018299) Nfu_g_1_002581 (ENSNFUG00015021268) NEK7 (ENSNFUG00015021276) ENSNFUG00015021375 ENSNFUG00015021395 ENSNFUG00015021417 ARRDC2 (ENSNFUG00015021433) UBA52 (ENSNFUG00015021445) #22 homer3b (ENSNFUG00015021458) #33 upf1 (ENSNFUG00015021476) #30 PGPEP1 (ENSNFUG00015021663) #14 lsm4 (ENSNFUG00015021666) #13 ddx49 (ENSNFUG00015021681) #32 JUND (ENSNFUG00015021768) #12 RAB3AB (ENSNFUG00015021771) ##8 MPV17L2 (ENSNFUG00015021776) #7 ENSNFUG00015021812 ENSNFUG00015022890 ENSNFUG00015022893 ENSNFUG00015022894 KANK3 (ENSNFUG00015022899) ANGPTL4 (ENSNFUG00015022906) dpp9 (ENSNFUG00015022961) Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Poeciliinae ANCESTRAL SPECIES 7 ENSGT00390000000259.k.b ENSGT00940000159007 ENSGT00940000160899 ENSGT01040000240503.A.a.b ENSGT00390000002390.a ENSGT00390000006565.b ENSGT00390000018061 ENSGT00940000156757 ENSGT00940000158174.a ENSGT00940000159478.f ENSGT00940000154457.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Platyfish MODERN SPECIES 23 pex11g (ENSXMAG00000002624) MED26 (ENSXMAG00000002623) slc35e1 (ENSXMAG00000024820) ARID3A (ENSXMAG00000002619) ENSXMAG00000002617 ENSXMAG00000027190 ndufs7 (ENSXMAG00000002609) gamt (ENSXMAG00000002603) dazap1 (ENSXMAG00000002593) dpp9 (ENSXMAG00000002573) ANGPTL4 (ENSXMAG00000002569) ENSXMAG00000019731 ENSXMAG00000009348 ENSXMAG00000003928 arrdc2 (ENSXMAG00000025940) uba52 (ENSXMAG00000003913) #22 homer3b (ENSXMAG00000002567) #33 ddx49 (ENSXMAG00000002554) #32 ENSXMAG00000027740 upf1 (ENSXMAG00000002540) #30 PGPEP1 (ENSXMAG00000002532) #14 lsm4 (ENSXMAG00000026672) #13 JUND (ENSXMAG00000020084) #12 RAB3A (ENSXMAG00000023647) ##8 mpv17l2 (ENSXMAG00000002525) #7 ENSXMAG00000002505 ENSXMAG00000002502 PIK3R2 (ENSXMAG00000002484) kank3 (ENSXMAG00000027105) ENSXMAG00000023978 ENSXMAG00000012367 Poecilia ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 NAME_6 ANCESTRAL SPECIES 133 ENSGT00940000160384 ENSGT00390000000427.b ENSGT00390000000427.a ENSGT00390000000259.k.b ENSGT00940000159007 ENSGT00940000160899 ENSGT01040000240503.A.a.b ENSGT00390000002390.a ENSGT00390000006565.b ENSGT00390000018061 ENSGT00940000156757 ENSGT00940000158174.a ENSGT00940000159478.f ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000154457.b Sailfin molly MODERN SPECIES 118 dpp9 (ENSPLAG00000016085) ANGPTL4 (ENSPLAG00000016099) ENSPLAG00000016109 ENSPLAG00000016119 arrdc2 (ENSPLAG00000016132) uba52 (ENSPLAG00000016141) #22 homer3b (ENSPLAG00000000368) #33 ddx49 (ENSPLAG00000016185) #32 upf1 (ENSPLAG00000016232) #30 PGPEP1 (ENSPLAG00000016254) #14 lsm4 (ENSPLAG00000016267) #13 ENSPLAG00000016286 JUND (ENSPLAG00000016304) #12 RAB3A (ENSPLAG00000016314) ##8 ENSPLAG00000000787 ENSPLAG00000016332 NAME_4 ANCESTRAL SPECIES 121 ENSGT00940000156725.f ENSGT00940000158821.n ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00940000159228.a.a ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.c ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a Mummichog MODERN SPECIES 2441 ENSFHEG00000016124 arrdc2 (ENSFHEG00000016141) ENSFHEG00000016150 uba52 (ENSFHEG00000016164) #22 homer3b (ENSFHEG00000016182) #33 ENSFHEG00000016199 #32 upf1 (ENSFHEG00000016276) #30 ENSFHEG00000016334 LSM4 (ENSFHEG00000016353) #13 PGPEP1 (ENSFHEG00000016365) #14 ENSFHEG00000016375 JUND (ENSFHEG00000016390) #12 RAB3A (ENSFHEG00000016398) ##8 mpv17l2 (ENSFHEG00000016402) #7 ENSFHEG00000016411 ENSFHEG00000016649 ENSFHEG00000016658 kank3 (ENSFHEG00000016671) ENSFHEG00000016686 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Perciformes ANCESTRAL SPECIES 8 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a Lumpfish MODERN SPECIES 19 ENSCLMG00005021610 nek7 (ENSCLMG00005021970) lhx9 (ENSCLMG00005021996) si:dkey-121a9.3 (ENSCLMG00005022003) DENND1B (ENSCLMG00005022006) crb1 (ENSCLMG00005022009) axdnd1 (ENSCLMG00005022021) ENSCLMG00005022024 ENSCLMG00005000085 fam163ab (ENSCLMG00005000111) RABGAP1L (ENSCLMG00005000218) ifi44f1 (ENSCLMG00005000557) ENSCLMG00005000562 arrdc2 (ENSCLMG00005000564) ENSCLMG00005000566 uba52 (ENSCLMG00005000569) #22 homer3b (ENSCLMG00005000575) #33 ddx49 (ENSCLMG00005000581) #32 upf1 (ENSCLMG00005000588) #30 PGPEP1 (ENSCLMG00005000672) #14 lsm4 (ENSCLMG00005000673) #13 ENSCLMG00005000675 JUND (ENSCLMG00005000676) #12 RAB3A (ENSCLMG00005000679) ##8 mpv17l2 (ENSCLMG00005000680) #7 ENSCLMG00005000681 #7 RNF213 (ENSCLMG00005000689) JUND (ENSCLMG00005000692) #12 MPV17L2 (ENSCLMG00005000693) #7 ENSCLMG00005000696 #7 ENSCLMG00005000721 Stickleback MODERN SPECIES 8 ANO8 (ENSGACG00000007802) dda1 (ENSGACG00000007816) ABHD8 (ENSGACG00000007838) ENSGACG00000007843 nek7 (ENSGACG00000007863) lhx9 (ENSGACG00000007885) DENND1B (ENSGACG00000007908) ENSGACG00000007918 nphs2 (ENSGACG00000007929) fam163ab (ENSGACG00000007937) RABGAP1L (ENSGACG00000007940) GPR52 (ENSGACG00000007955) ifi44f1 (ENSGACG00000007958) ENSGACG00000007974 arrdc2 (ENSGACG00000007983) uba52 (ENSGACG00000008021) #22 homer3b (ENSGACG00000008041) #33 ddx49 (ENSGACG00000008047) #32 upf1 (ENSGACG00000008078) #30 PGPEP1 (ENSGACG00000008132) #14 lsm4 (ENSGACG00000008140) #13 RAB3A (ENSGACG00000008173) ##8 mpv17l2 (ENSGACG00000008179) #7 ENSGACG00000008183 ENSGACG00000008194 PIK3R2 (ENSGACG00000008201) kank3 (ENSGACG00000008209) ENSGACG00000008217 dpp9 (ENSGACG00000008230) dazap1 (ENSGACG00000008259) gamt (ENSGACG00000008306) Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00510000053055 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a Pike perch MODERN SPECIES 189 DENND1B (ENSSLUG00000011391) ENSSLUG00000011401 crb1 (ENSSLUG00000011404) axdnd1 (ENSSLUG00000011411) nphs2 (ENSSLUG00000011430) ENSSLUG00000011440 fam163ab (ENSSLUG00000011461) RABGAP1L (ENSSLUG00000011596) GPR52 (ENSSLUG00000013769) ifi44f1 (ENSSLUG00000013783) ENSSLUG00000013811 arrdc2 (ENSSLUG00000013823) ENSSLUG00000013835 uba52 (ENSSLUG00000013841) #22 homer3b (ENSSLUG00000013860) #33 ddx49 (ENSSLUG00000013910) #32 upf1 (ENSSLUG00000013934) #30 PGPEP1 (ENSSLUG00000013992) #14 lsm4 (ENSSLUG00000014006) #13 ENSSLUG00000014040 ENSSLUG00000014053 JUND (ENSSLUG00000014063) #12 RAB3A (ENSSLUG00000014075) ##8 mpv17l2 (ENSSLUG00000014086) #7 mpv17l2 (ENSSLUG00000014091) #7 ENSSLUG00000014134 ENSSLUG00000014184 ENSSLUG00000014199 PIK3R2 (ENSSLUG00000014247) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000167793 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b Carangaria ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Carangaria_A ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Seriola ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Yellowtail amberjack MODERN SPECIES 2229 ENSSLDG00000007218 arrdc2 (ENSSLDG00000007155) uba52 (ENSSLDG00000007121) #22 homer3b (ENSSLDG00000007019) #33 ddx49 (ENSSLDG00000006958) #32 upf1 (ENSSLDG00000006878) #30 PGPEP1 (ENSSLDG00000006853) #14 lsm4 (ENSSLDG00000006827) #13 RNF213 (ENSSLDG00000006691) JUND (ENSSLDG00000006657) #12 RAB3A (ENSSLDG00000006642) ##8 mpv17l2 (ENSSLDG00000006616) #7 ENSSLDG00000006473 ENSSLDG00000006422 ENSSLDG00000006382 ENSSLDG00000006367 kank3 (ENSSLDG00000006343) Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Zig-zag eel MODERN SPECIES 18 DENND1B (ENSMAMG00000006893) crb1 (ENSMAMG00000006816) axdnd1 (ENSMAMG00000006754) nphs2 (ENSMAMG00000006744) ENSMAMG00000006700 fam163ab (ENSMAMG00000027898) ENSMAMG00000006557 ENSMAMG00000006669 ENSMAMG00000006464 ENSMAMG00000006432 ENSMAMG00000006527 ENSMAMG00000006478 ENSMAMG00000025914 ENSMAMG00000006412 ENSMAMG00000006395 ENSMAMG00000026989 #22 ENSMAMG00000006337 #33 ddx49 (ENSMAMG00000006297) #32 ENSMAMG00000006231 #30 PGPEP1 (ENSMAMG00000024862) #14 lsm4 (ENSMAMG00000006190) #13 JUND (ENSMAMG00000006167) #12 ENSMAMG00000025742 ##8 ENSMAMG00000006130 #7 ENSMAMG00000005974 ENSMAMG00000005943 ENSMAMG00000005921 ENSMAMG00000005911 ENSMAMG00000005899 ENSMAMG00000005887 ENSMAMG00000005795 Anabantoidei ANCESTRAL SPECIES ENSGT00940000153593.e.a #22 Climbing perch MODERN SPECIES 17 DENND1B (ENSATEG00000017172) crb1 (ENSATEG00000017122) ENSATEG00000029257 axdnd1 (ENSATEG00000017097) nphs2 (ENSATEG00000017037) ENSATEG00000017002 fam163ab (ENSATEG00000016984) ENSATEG00000016972 ENSATEG00000016861 ENSATEG00000016836 ENSATEG00000016818 ENSATEG00000016811 ENSATEG00000016797 arrdc2 (ENSATEG00000016769) ENSATEG00000028050 ENSATEG00000026189 #22 homer3b (ENSATEG00000016715) #33 ddx49 (ENSATEG00000016661) #32 ENSATEG00000016606 #30 PGPEP1 (ENSATEG00000016574) #14 LSM4 (ENSATEG00000027669) #13 JUND (ENSATEG00000016543) #12 ENSATEG00000027208 ##8 ENSATEG00000016517 #7 ENSATEG00000016430 #7 ENSATEG00000026846 #7 ENSATEG00000016280 ENSATEG00000016239 ENSATEG00000016205 ENSATEG00000016181 ENSATEG00000016160 Euteleosteomorpha ANCESTRAL SPECIES 63 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.b.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00390000010450 ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00990000206484 ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Eupercaria ANCESTRAL SPECIES 22 ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00990000206484 ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Ballan wrasse MODERN SPECIES 13 nek7 (ENSLBEG00000027272) lhx9 (ENSLBEG00000027296) si:dkey-121a9.3 (ENSLBEG00000027308) DENND1B (ENSLBEG00000027321) crb1 (ENSLBEG00000027375) axdnd1 (ENSLBEG00000027427) ENSLBEG00000027447 ENSLBEG00000027480 fam163ab (ENSLBEG00000027530) RABGAP1L (ENSLBEG00000027547) GPR52 (ENSLBEG00000027589) ifi44f1 (ENSLBEG00000027620) ENSLBEG00000027648 arrdc2 (ENSLBEG00000027659) ENSLBEG00000027669 uba52 (ENSLBEG00000027676) #22 homer3b (ENSLBEG00000027716) #33 ENSLBEG00000027765 ddx49 (ENSLBEG00000027804) #32 upf1 (ENSLBEG00000027848) #30 PGPEP1 (ENSLBEG00000027918) #14 lsm4 (ENSLBEG00000027930) #13 RNF213 (ENSLBEG00000028022) ENSLBEG00000028144 JUND (ENSLBEG00000028152) #12 RAB3A (ENSLBEG00000028160) ##8 mpv17l2 (ENSLBEG00000028170) #7 mpv17l2 (ENSLBEG00000000003) #7 ENSLBEG00000000014 ENSLBEG00000000017 ENSLBEG00000000027 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Perciformes ANCESTRAL SPECIES ENSGT00940000153593.e.b #22 Perciformes_a ANCESTRAL SPECIES ENSGT00940000153593.e.b #22 Channel bull blenny MODERN SPECIES 18 si:dkey-121a9.3 (ENSCGOG00000011611) DENND1B (ENSCGOG00000011614) ENSCGOG00000011623 crb1 (ENSCGOG00000011625) axdnd1 (ENSCGOG00000011630) ENSCGOG00000011639 ENSCGOG00000011643 fam163ab (ENSCGOG00000011653) RABGAP1L (ENSCGOG00000011713) GPR52 (ENSCGOG00000013400) ENSCGOG00000013401 ENSCGOG00000013405 ENSCGOG00000013414 ENSCGOG00000013418 arrdc2 (ENSCGOG00000013424) uba52 (ENSCGOG00000013477) #22 homer3b (ENSCGOG00000013502) #33 ddx49 (ENSCGOG00000013513) #32 upf1 (ENSCGOG00000013710) #30 PGPEP1 (ENSCGOG00000014066) #14 lsm4 (ENSCGOG00000014071) #13 JUND (ENSCGOG00000014117) #12 RAB3A (ENSCGOG00000014120) ##8 mpv17l2 (ENSCGOG00000014123) #7 ENSCGOG00000014210 ENSCGOG00000017163 PIK3R2 (ENSCGOG00000017171) ENSCGOG00000017212 kank3 (ENSCGOG00000017225) ENSCGOG00000017226 ENSCGOG00000017227 Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 2 lhx9 (ENSSAUG00010024007) DENND1B (ENSSAUG00010024008) crb1 (ENSSAUG00010024009) axdnd1 (ENSSAUG00010024011) nphs2 (ENSSAUG00010006423) ENSSAUG00010006428 fam163ab (ENSSAUG00010006429) RABGAP1L (ENSSAUG00010006448) ENSSAUG00010009606 ENSSAUG00010009607 ENSSAUG00010009622 ENSSAUG00010009649 ENSSAUG00010009655 arrdc2 (ENSSAUG00010009656) ENSSAUG00010009680 uba52 (ENSSAUG00010009682) #22 homer3b (ENSSAUG00010009689) #33 ddx49 (ENSSAUG00010009744) #32 upf1 (ENSSAUG00010009750) #30 PGPEP1 (ENSSAUG00010009775) #14 lsm4 (ENSSAUG00010009780) #13 ENSSAUG00010009786 JUND (ENSSAUG00010009792) #12 RAB3A (ENSSAUG00010009796) ##8 mpv17l2 (ENSSAUG00010009857) #7 ENSSAUG00010009871 ENSSAUG00010009968 ENSSAUG00010009969 ENSSAUG00010009970 kank3 (ENSSAUG00010009972) ANGPTL4 (ENSSAUG00010009976) Gilthead seabream MODERN SPECIES 13 SDHC (ENSSAUG00010008991) atp1a2a (ENSSAUG00010007626) mpz (ENSSAUG00010007608) lig1 (ENSSAUG00010007574) ENSSAUG00010007522 PIP4P1 (ENSSAUG00010007517) dnaaf6 (ENSSAUG00010007515) ENSSAUG00010007513 eif3f (ENSSAUG00010007511) KCNJ9 (ENSSAUG00010007508) ENSSAUG00010007507 SVIL (ENSSAUG00010007007) ENSSAUG00010006986 ZEB1 (ENSSAUG00010006978) ENSSAUG00010006975 uba52 (ENSSAUG00010006967) #22 HOMER3 (ENSSAUG00010006962) #33 upf1 (ENSSAUG00010006947) #30 pgpep1 (ENSSAUG00010006940) #14 jund (ENSSAUG00010006938) #12 RAB3A (ENSSAUG00010006934) ##8 ENSSAUG00010006739 pik3r2 (ENSSAUG00010006682) MAST3 (ENSSAUG00010006678) ENSSAUG00010006676 #15 crtc1a (ENSSAUG00010006670) ##28 MED26 (ENSSAUG00010006667) ENSSAUG00010006664 rps15 (ENSSAUG00010006634) DPP9 (ENSSAUG00010003300) angptl4 (ENSSAUG00010003243) Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 489 ENSLCRG00005000854 arrdc2 (ENSLCRG00005000824) ENSLCRG00005000812 ENSLCRG00005020464 uba52 (ENSLCRG00005020462) #22 homer3b (ENSLCRG00005020461) #33 ddx49 (ENSLCRG00005020457) #32 upf1 (ENSLCRG00005020453) #30 PGPEP1 (ENSLCRG00005020449) #14 lsm4 (ENSLCRG00005020447) #13 JUND (ENSLCRG00005020445) #12 RAB3A (ENSLCRG00005020443) ##8 mpv17l2 (ENSLCRG00005020442) #7 ENSLCRG00005020424 ENSLCRG00005020421 PIK3R2 (ENSLCRG00005020420) ENSLCRG00005020418 ENSLCRG00005020415 kank3 (ENSLCRG00005020413) ENSLCRG00005020411 Large yellow croaker MODERN SPECIES 483 ap2m1a (ENSLCRG00005023420) dvl3a (ENSLCRG00005023423) copb2 (ENSLCRG00005023427) rbp2b (ENSLCRG00005023513) rbp1.1 (ENSLCRG00005023514) NMNAT3 (ENSLCRG00005023515) clstn2a (ENSLCRG00005023521) spsb4a (ENSLCRG00005023571) zgc:136870 (ENSLCRG00005023572) slc25a36a (ENSLCRG00005023573) MARCHF2 (ENSLCRG00005023574) rab11bb (ENSLCRG00005023575) TIMM44 (ENSLCRG00005023576) ENSLCRG00005023589 ENSLCRG00005023590 uba52 (ENSLCRG00005023591) #22 HOMER3 (ENSLCRG00005023593) #33 upf1 (ENSLCRG00005023597) #30 pgpep1 (ENSLCRG00005023637) #14 jund (ENSLCRG00005023638) #12 RAB3A (ENSLCRG00005023639) ##8 ENSLCRG00005023641 ifi30 (ENSLCRG00005023645) pik3r2 (ENSLCRG00005023647) ENSLCRG00005023658 rps15 (ENSLCRG00005023659) ENSLCRG00005023663 #15 crtc1a (ENSLCRG00005023665) ##28 MED26 (ENSLCRG00005023666) ENSLCRG00005023667 DPP9 (ENSLCRG00005023670) Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00990000206484 ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Zig-zag eel MODERN SPECIES 8 ENSMAMG00000006654 ENSMAMG00000006605 copb2 (ENSMAMG00000006528) rbp2b (ENSMAMG00000006509) rbp1.1 (ENSMAMG00000006493) NMNAT3 (ENSMAMG00000006484) clstn2a (ENSMAMG00000006456) zgc:136870 (ENSMAMG00000006438) spsb4a (ENSMAMG00000006429) ENSMAMG00000024459 ENSMAMG00000006383 rab11bb (ENSMAMG00000006378) ENSMAMG00000006367 ENSMAMG00000006355 ENSMAMG00000006327 uba52 (ENSMAMG00000006321) #22 ENSMAMG00000006299 #33 upf1 (ENSMAMG00000006229) #30 pgpep1 (ENSMAMG00000006217) #14 jund (ENSMAMG00000006203) #12 ENSMAMG00000006185 ##8 ENSMAMG00000006043 ifi30 (ENSMAMG00000006032) pik3r2 (ENSMAMG00000005988) ENSMAMG00000005957 ENSMAMG00000005932 #15 crtc1a (ENSMAMG00000024320) ##28 ENSMAMG00000005892 ENSMAMG00000005876 ENSMAMG00000005870 ENSMAMG00000005830 Carangaria ANCESTRAL SPECIES 5 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Barramundi perch MODERN SPECIES 69 ap2m1a (ENSLCAG00010020671) dvl3a (ENSLCAG00010020676) copb2 (ENSLCAG00010020835) rbp2b (ENSLCAG00010021293) rbp1.1 (ENSLCAG00010021298) NMNAT3 (ENSLCAG00010021301) clstn2a (ENSLCAG00010021304) spsb4a (ENSLCAG00010021315) zgc:136870 (ENSLCAG00010021318) slc25a36a (ENSLCAG00010021326) MARCHF2 (ENSLCAG00010021331) rab11bb (ENSLCAG00010021340) TIMM44 (ENSLCAG00010021394) CTXN1 (ENSLCAG00010021496) CERS4 (ENSLCAG00010021499) uba52 (ENSLCAG00010021500) #22 HOMER3 (ENSLCAG00010021508) #33 upf1 (ENSLCAG00010021515) #30 pgpep1 (ENSLCAG00010021529) #14 jund (ENSLCAG00010021531) #12 RAB3A (ENSLCAG00010021537) ##8 ENSLCAG00010021553 ifi30 (ENSLCAG00010021559) pik3r2 (ENSLCAG00010021561) MAST3 (ENSLCAG00010021565) ENSLCAG00010021568 #15 crtc1a (ENSLCAG00010021571) ##28 MED26 (ENSLCAG00010021575) ENSLCAG00010021577 rps15 (ENSLCAG00010021579) DPP9 (ENSLCAG00010021697) Seriola ANCESTRAL SPECIES ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Greater amberjack MODERN SPECIES 83 ap2m1a (ENSSDUG00000013877) dvl3a (ENSSDUG00000013838) copb2 (ENSSDUG00000013764) rbp2b (ENSSDUG00000013743) rbp1.1 (ENSSDUG00000013706) NMNAT3 (ENSSDUG00000013697) clstn2a (ENSSDUG00000013636) zgc:136870 (ENSSDUG00000013620) spsb4a (ENSSDUG00000013610) slc25a36a (ENSSDUG00000013585) MARCHF2 (ENSSDUG00000013566) rab11bb (ENSSDUG00000013558) TIMM44 (ENSSDUG00000013532) CTXN1 (ENSSDUG00000013526) CERS4 (ENSSDUG00000013462) uba52 (ENSSDUG00000013436) #22 HOMER3 (ENSSDUG00000013419) #33 upf1 (ENSSDUG00000013320) #30 pgpep1 (ENSSDUG00000013291) #14 jund (ENSSDUG00000013277) #12 RAB3A (ENSSDUG00000013259) ##8 ENSSDUG00000013184 ifi30 (ENSSDUG00000013153) pik3r2 (ENSSDUG00000013068) MAST3 (ENSSDUG00000012940) ENSSDUG00000012917 #15 crtc1a (ENSSDUG00000012878) ##28 MED26 (ENSSDUG00000012866) ENSSDUG00000012852 rps15 (ENSSDUG00000012842) DPP9 (ENSSDUG00000012761) Yellowtail amberjack MODERN SPECIES 3160 dvl3a (ENSSLDG00000020388) ENSSLDG00000020405 copb2 (ENSSLDG00000020433) rbp2b (ENSSLDG00000020513) rbp1.1 (ENSSLDG00000020526) NMNAT3 (ENSSLDG00000020535) clstn2a (ENSSLDG00000020561) spsb4a (ENSSLDG00000020633) zgc:136870 (ENSSLDG00000020640) slc25a36a (ENSSLDG00000020649) MARCHF2 (ENSSLDG00000020670) rab11bb (ENSSLDG00000020676) TIMM44 (ENSSLDG00000020686) CTXN1 (ENSSLDG00000020704) CERS4 (ENSSLDG00000020711) uba52 (ENSSLDG00000020739) #22 HOMER3 (ENSSLDG00000020840) #33 upf1 (ENSSLDG00000020868) #30 pgpep1 (ENSSLDG00000020900) #14 jund (ENSSLDG00000020919) #12 RAB3A (ENSSLDG00000020924) ##8 ENSSLDG00000020948 ifi30 (ENSSLDG00000021006) pik3r2 (ENSSLDG00000021025) MAST3 (ENSSLDG00000021107) ENSSLDG00000021162 #15 ENSSLDG00000021167 crtc1a (ENSSLDG00000021185) ##28 MED26 (ENSSLDG00000021208) ENSSLDG00000021218 rps15 (ENSSLDG00000021227) Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Pomacentridae ANCESTRAL SPECIES 6 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Pomacentridae_A ANCESTRAL SPECIES 18 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Amphiprion ANCESTRAL SPECIES 56 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Orange clownfish MODERN SPECIES 1 ap2m1a (ENSAPEG00000016947) dvl3a (ENSAPEG00000016879) copb2 (ENSAPEG00000016809) rbp2b (ENSAPEG00000016791) rbp1.1 (ENSAPEG00000016783) NMNAT3 (ENSAPEG00000016768) clstn2a (ENSAPEG00000016707) zgc:136870 (ENSAPEG00000016668) spsb4a (ENSAPEG00000016656) slc25a36a (ENSAPEG00000016623) MARCHF2 (ENSAPEG00000016600) rab11bb (ENSAPEG00000016590) TIMM44 (ENSAPEG00000016535) CTXN1 (ENSAPEG00000016527) ENSAPEG00000016515 uba52 (ENSAPEG00000016505) #22 HOMER3 (ENSAPEG00000016482) #33 upf1 (ENSAPEG00000016344) #30 pgpep1 (ENSAPEG00000016314) #14 jund (ENSAPEG00000016308) #12 RAB3A (ENSAPEG00000016297) ##8 ENSAPEG00000016224 ifi30 (ENSAPEG00000016204) pik3r2 (ENSAPEG00000016119) ENSAPEG00000016073 ENSAPEG00000016053 #15 crtc1a (ENSAPEG00000016019) ##28 MED26 (ENSAPEG00000016014) ENSAPEG00000015970 rps15 (ENSAPEG00000015950) DPP9 (ENSAPEG00000015866) Clown anemonefish MODERN SPECIES 694 slc25a36a (ENSAOCG00000018206) MARCHF2 (ENSAOCG00000018227) rab11bb (ENSAOCG00000018239) TIMM44 (ENSAOCG00000018254) CTXN1 (ENSAOCG00000018267) ENSAOCG00000018339 uba52 (ENSAOCG00000018365) #22 HOMER3 (ENSAOCG00000018407) #33 upf1 (ENSAOCG00000018519) #30 pgpep1 (ENSAOCG00000018549) #14 jund (ENSAOCG00000018564) #12 RAB3A (ENSAOCG00000018573) ##8 ENSAOCG00000001336 ENSAOCG00000018626 ifi30 (ENSAOCG00000018652) pik3r2 (ENSAOCG00000001345) ENSAOCG00000018850 ENSAOCG00000002362 #15 crtc1a (ENSAOCG00000018918) ##28 MED26 (ENSAOCG00000018938) ENSAOCG00000018981 rps15 (ENSAOCG00000001359) Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Midas cichlid MODERN SPECIES 235 dvl3a (ENSACIG00000019339) copb2 (ENSACIG00000019369) rbp2b (ENSACIG00000019401) rbp1.1 (ENSACIG00000019416) NMNAT3 (ENSACIG00000019503) clstn2a (ENSACIG00000019526) ENSACIG00000019567 spsb4a (ENSACIG00000019576) zgc:136870 (ENSACIG00000019585) slc25a36a (ENSACIG00000019600) MARCHF2 (ENSACIG00000019618) rab11bb (ENSACIG00000019631) TIMM44 (ENSACIG00000019644) CTXN1 (ENSACIG00000019666) ENSACIG00000019677 uba52 (ENSACIG00000019707) #22 HOMER3 (ENSACIG00000019924) #33 lzic (ENSACIG00000019942) upf1 (ENSACIG00000019949) #30 pgpep1 (ENSACIG00000019992) #14 jund (ENSACIG00000020001) #12 RAB3A (ENSACIG00000020019) ##8 ENSACIG00000020265 IFI30 (ENSACIG00000020300) pik3r2 (ENSACIG00000020433) ENSACIG00000020452 ENSACIG00000020471 #15 ENSACIG00000020474 ##28 crtc1a (ENSACIG00000020482) ##28 MED26 (ENSACIG00000020502) CNN3 (ENSACIG00000020509) Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000181786 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000181786 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000162556.D.b.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164492.b ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 P. nyererei MODERN SPECIES 299 DYNC1I2 (ENSPNYG00000004520) pcyt1aa (ENSPNYG00000004498) ap2m1a (ENSPNYG00000004468) dvl3a (ENSPNYG00000004421) copb2 (ENSPNYG00000004364) rbp2b (ENSPNYG00000004334) rbp1.1 (ENSPNYG00000004312) NMNAT3 (ENSPNYG00000004294) clstn2a (ENSPNYG00000004231) zgc:136870 (ENSPNYG00000004207) spsb4a (ENSPNYG00000004191) slc25a36a (ENSPNYG00000004157) MARCHF2 (ENSPNYG00000004130) rab11bb (ENSPNYG00000004098) TIMM44 (ENSPNYG00000004070) uba52 (ENSPNYG00000003911) #22 ENSPNYG00000003807 HOMER3 (ENSPNYG00000003778) #33 upf1 (ENSPNYG00000003694) #30 pgpep1 (ENSPNYG00000003672) #14 jund (ENSPNYG00000003650) #12 RAB3A (ENSPNYG00000003624) ##8 ENSPNYG00000003553 ENSPNYG00000003518 ifi30 (ENSPNYG00000003489) pik3r2 (ENSPNYG00000003416) ENSPNYG00000003345 ENSPNYG00000003324 #15 crtc1a (ENSPNYG00000003288) ##28 MED26 (ENSPNYG00000003282) ENSPNYG00000003255 Lyretail cichlid MODERN SPECIES 300 pcyt1aa (ENSNBRG00000022706) ap2m1a (ENSNBRG00000022722) dvl3a (ENSNBRG00000022744) copb2 (ENSNBRG00000022777) rbp2b (ENSNBRG00000022801) rbp1.1 (ENSNBRG00000022813) NMNAT3 (ENSNBRG00000022863) clstn2a (ENSNBRG00000022882) spsb4a (ENSNBRG00000022916) zgc:136870 (ENSNBRG00000022923) slc25a36a (ENSNBRG00000000318) MARCHF2 (ENSNBRG00000000345) rab11bb (ENSNBRG00000000372) TIMM44 (ENSNBRG00000000376) CERS4 (ENSNBRG00000000500) uba52 (ENSNBRG00000000583) #22 HOMER3 (ENSNBRG00000000598) #33 ENSNBRG00000000632 upf1 (ENSNBRG00000000670) #30 pgpep1 (ENSNBRG00000000761) #14 jund (ENSNBRG00000000825) #12 RAB3A (ENSNBRG00000000839) ##8 ENSNBRG00000000846 ifi30 (ENSNBRG00000000901) pik3r2 (ENSNBRG00000000914) ENSNBRG00000000988 ENSNBRG00000001060 #15 crtc1a (ENSNBRG00000001070) ##28 MED26 (ENSNBRG00000001138) ENSNBRG00000001145 rps15 (ENSNBRG00000001176) Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 18 nphs2 (ENSMMDG00005001653) ENSMMDG00005001646 fam163ab (ENSMMDG00005001637) tbpl2 (ENSMMDG00005001627) RABGAP1L (ENSMMDG00005000397) ENSMMDG00005000089 ENSMMDG00005013294 ENSMMDG00005013285 ENSMMDG00005013267 ENSMMDG00005013261 ENSMMDG00005013245 ENSMMDG00005013230 ENSMMDG00005013223 arrdc2 (ENSMMDG00005013210) ENSMMDG00005013205 uba52 (ENSMMDG00005013196) #22 ENSMMDG00005013190 homer3b (ENSMMDG00005013182) #33 ddx49 (ENSMMDG00005013099) #32 upf1 (ENSMMDG00005013088) #30 PGPEP1 (ENSMMDG00005013080) #14 lsm4 (ENSMMDG00005013075) #13 ENSMMDG00005013072 JUND (ENSMMDG00005013070) #12 RAB3A (ENSMMDG00005013068) ##8 mpv17l2 (ENSMMDG00005013066) #7 ENSMMDG00005012912 ENSMMDG00005012879 PIK3R2 (ENSMMDG00005012807) kank3 (ENSMMDG00005012803) ENSMMDG00005012801 Pinecone sodierfish MODERN SPECIES 8 dvl3a (ENSMMDG00005018119) copb2 (ENSMMDG00005016919) rbp2b (ENSMMDG00005016897) rbp1.1 (ENSMMDG00005016895) NMNAT3 (ENSMMDG00005016893) ENSMMDG00005016891 clstn2a (ENSMMDG00005016797) zgc:136870 (ENSMMDG00005016783) spsb4a (ENSMMDG00005016781) slc25a36a (ENSMMDG00005016779) MARCHF2 (ENSMMDG00005016775) rab11bb (ENSMMDG00005016770) TIMM44 (ENSMMDG00005016705) CTXN1 (ENSMMDG00005016693) ENSMMDG00005016688 uba52 (ENSMMDG00005016682) #22 HOMER3 (ENSMMDG00005016621) #33 upf1 (ENSMMDG00005015515) #30 pgpep1 (ENSMMDG00005015307) #14 jund (ENSMMDG00005015297) #12 RAB3A (ENSMMDG00005015295) ##8 ENSMMDG00005015290 ifi30 (ENSMMDG00005015289) pik3r2 (ENSMMDG00005014416) MAST3 (ENSMMDG00005014384) ENSMMDG00005014383 #15 crtc1a (ENSMMDG00005014379) ##28 MED26 (ENSMMDG00005014375) ENSMMDG00005014369 rps15 (ENSMMDG00005014342) DPP9 (ENSMMDG00005011529) Protacanthopterygii ANCESTRAL SPECIES 60 ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.a.a ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Northern pike MODERN SPECIES 2 pcyt1aa (ENSELUG00000021543) ap2m1a (ENSELUG00000021515) dvl3a (ENSELUG00000021493) copb2 (ENSELUG00000021442) rbp2b (ENSELUG00000021410) rbp1.1 (ENSELUG00000021393) NMNAT3 (ENSELUG00000021366) clstn2a (ENSELUG00000021303) spsb4a (ENSELUG00000021197) slc25a36a (ENSELUG00000021181) MARCHF2 (ENSELUG00000000931) rab11bb (ENSELUG00000021148) TIMM44 (ENSELUG00000021107) CTXN1 (ENSELUG00000000927) CERS4 (ENSELUG00000020996) uba52 (ENSELUG00000027664) #22 HOMER3 (ENSELUG00000020980) #33 upf1 (ENSELUG00000020917) #30 pgpep1 (ENSELUG00000020843) #14 jund (ENSELUG00000020828) #12 RAB3A (ENSELUG00000032538) ##8 ENSELUG00000020697 mpv17l2 (ENSELUG00000020559) #7 ifi30 (ENSELUG00000020539) pik3r2 (ENSELUG00000001241) MAST3 (ENSELUG00000020448) ENSELUG00000026162 #15 crtc1a (ENSELUG00000020357) ##28 MED26 (ENSELUG00000000890) ENSELUG00000020289 rps15 (ENSELUG00000020275) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 83 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a.a ENSGT00940000154369.g.a.g ENSGT00940000158995.b.a ENSGT00940000163126.a.a.c ENSGT00390000000051.b.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b.g.a #22 ENSGT00940000158081.o.b.c #33 ENSGT00940000157413.h.b #30 ENSGT00390000015368.a.a.c.h #14 ENSGT00940000162806.b.a.g #12 ENSGT00940000158959.a.a.a.a ##8 ENSGT00940000164492.a.a.e ENSGT00940000160620.w.a #7 ENSGT00940000164804.a.e ENSGT00940000157050.i.a.d ENSGT00940000157166.d.d ENSGT00940000161872.g #15 ENSGT00390000010652.D.a.b.d.b ##28 ENSGT00390000000259.k.a.d ENSGT00940000154539.a.b.a ENSGT00390000006565.a.a Huchen MODERN SPECIES 636 ENSHHUG00000037655 clstn2a (ENSHHUG00000037660) spsb4a (ENSHHUG00000037714) ENSHHUG00000037723 slc25a36a (ENSHHUG00000037726) MARCHF2 (ENSHHUG00000037734) rab11bb (ENSHHUG00000037740) TIMM44 (ENSHHUG00000037749) ENSHHUG00000037767 uba52 (ENSHHUG00000037841) #22 HOMER3 (ENSHHUG00000037867) #33 upf1 (ENSHHUG00000037879) #30 pgpep1 (ENSHHUG00000037923) #14 jund (ENSHHUG00000037933) #12 RAB3A (ENSHHUG00000037938) ##8 Salmoninae_a ANCESTRAL SPECIES 6 ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a ENSGT00940000159675.a.a ENSGT00940000159675.a.b ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b.d ENSGT01030000234629.C.a.b ENSGT00940000154369.g.a.h ENSGT00940000158995.b.b ENSGT00940000163126.a.a.d ENSGT00390000000051.b.a ENSGT00940000154412.C.c.a ENSGT00940000153593.e.b.g.a #22 ENSGT00940000158081.o.b.d #33 ENSGT00940000157413.h.a #30 ENSGT00390000015368.a.a.c.g #14 ENSGT00940000162806.b.a.h #12 ENSGT00940000158959.a.a.a.b ##8 ENSGT00940000164492.a.a.f ENSGT00940000160620.w.b #7 ENSGT00940000164804.a.f ENSGT00940000157050.i.a.c ENSGT00940000157166.d.c ENSGT00940000161872.h #15 ENSGT00390000010652.D.a.b.d.a ##28 ENSGT00390000000259.k.a.c ENSGT00940000154539.a.b.b ENSGT00390000000475 Salmo ANCESTRAL SPECIES ENSGT00940000153593.e.b.g.a #22 River trout MODERN SPECIES 13 AP2M1 (ENSSTUG00000025794) DVL3 (ENSSTUG00000025749) copb2 (ENSSTUG00000047339) rbp1.1 (ENSSTUG00000047325) ENSSTUG00000047323 clstn2a (ENSSTUG00000046411) ENSSTUG00000046381 zgc:136870 (ENSSTUG00000046379) ENSSTUG00000046370 spsb4a (ENSSTUG00000046366) slc25a36a (ENSSTUG00000046315) MARCHF2 (ENSSTUG00000046310) rab11bb (ENSSTUG00000046273) TIMM44 (ENSSTUG00000045610) ENSSTUG00000045550 uba52 (ENSSTUG00000045528) #22 HOMER3 (ENSSTUG00000045507) #33 upf1 (ENSSTUG00000045435) #30 pgpep1 (ENSSTUG00000045411) #14 jund (ENSSTUG00000045408) #12 RAB3A (ENSSTUG00000045399) ##8 ENSSTUG00000045342 mpv17l2 (ENSSTUG00000045307) #7 ifi30 (ENSSTUG00000045291) pik3r2 (ENSSTUG00000045156) MAST3 (ENSSTUG00000045055) ENSSTUG00000045032 #15 crtc1a (ENSSTUG00000044995) ##28 MED26 (ENSSTUG00000044982) ENSSTUG00000044962 NDUFS7 (ENSSTUG00000044913) Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00940000161729.m.a.b.a.a ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a ENSGT00940000159675.a.a ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b.d ENSGT01030000234629.C.a.b ENSGT00940000154369.g.a.h ENSGT00940000158995.b.b ENSGT00940000163126.a.a.d ENSGT00390000000051.b.a ENSGT00940000154412.C.c.a ENSGT00940000153593.e.b.g.a #22 ENSGT00940000158081.o.b.d #33 ENSGT00940000157413.h.a #30 ENSGT00390000015368.a.a.c.g #14 ENSGT00940000162806.b.a.h #12 ENSGT00940000158959.a.a.a.b ##8 ENSGT00940000164492.a.a.f ENSGT00940000160620.w.b #7 ENSGT00940000164804.a.f ENSGT00940000157050.i.a.c ENSGT00940000157166.d.c ENSGT00940000161872.h #15 ENSGT00390000010652.D.a.b.d.a ##28 ENSGT00390000000259.k.a.c ENSGT00940000154539.a.b.b ENSGT00390000000475 Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00940000161729.m.a.b.a.a ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a ENSGT00940000159675.a.a ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b.d ENSGT01030000234629.C.a.b ENSGT00940000154369.g.a.h ENSGT00940000158995.b.b ENSGT00940000163126.a.a.d ENSGT00390000000051.b.a ENSGT00940000154412.C.c.a ENSGT00940000153593.e.b.g.a #22 ENSGT00940000158081.o.b.d #33 ENSGT00940000157413.h.a #30 ENSGT00390000015368.a.a.c.g #14 ENSGT00940000162806.b.a.h #12 ENSGT00940000158959.a.a.a.b ##8 ENSGT00940000164492.a.a.f ENSGT00940000160620.w.b #7 ENSGT00940000164804.a.f ENSGT00940000157050.i.a.c ENSGT00940000157166.d.c ENSGT00940000161872.h #15 ENSGT00390000010652.D.a.b.d.a ##28 ENSGT00390000000259.k.a.c ENSGT00940000154539.a.b.b ENSGT00390000000475 Chinook salmon MODERN SPECIES 2888 dvl3a (ENSOTSG00005023093) ENSOTSG00005023098 copb2 (ENSOTSG00005023103) rbp1.1 (ENSOTSG00005026334) NMNAT3 (ENSOTSG00005026335) clstn2a (ENSOTSG00005026336) ENSOTSG00005026337 spsb4a (ENSOTSG00005026338) slc25a36a (ENSOTSG00005026339) SLC25A36 (ENSOTSG00005026340) MARCHF2 (ENSOTSG00005026341) rab11bb (ENSOTSG00005026342) TIMM44 (ENSOTSG00005026371) CTXN1 (ENSOTSG00005027251) ENSOTSG00005027252 uba52 (ENSOTSG00005027254) #22 HOMER3 (ENSOTSG00005027255) #33 upf1 (ENSOTSG00005027257) #30 pgpep1 (ENSOTSG00005027379) #14 jund (ENSOTSG00005027380) #12 RAB3A (ENSOTSG00005027381) ##8 ENSOTSG00005027382 mpv17l2 (ENSOTSG00005027385) #7 ifi30 (ENSOTSG00005027386) pik3r2 (ENSOTSG00005027388) MAST3 (ENSOTSG00005027403) ENSOTSG00005027406 #15 crtc1a (ENSOTSG00005027409) ##28 MED26 (ENSOTSG00005027410) ENSOTSG00005027412 RPS15 (ENSOTSG00005027414) Salmoninae ANCESTRAL SPECIES 340 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000160221.c.e ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.b ENSGT00940000165866.p.b.a ENSGT00940000159994.g ENSGT00940000177177 ENSGT00940000153593.e.b.g.b #22 ENSGT00730000113192 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000177302 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES ENSGT00940000153593.e.b.g.b.a #22 Salmo ANCESTRAL SPECIES 5 ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a ENSGT00940000159675.a.a ENSGT00940000159675.a.b ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b.d ENSGT01030000234629.C.a.b ENSGT00940000154369.g.a.h ENSGT00940000158995.b.b ENSGT00940000163126.a.a.d ENSGT00390000000051.b.a ENSGT00940000154412.C.c.a ENSGT00940000153593.e.b.g.b.a #22 ENSGT00940000158081.o.b.d #33 ENSGT00940000157413.h.a #30 ENSGT00390000015368.a.a.c.g #14 ENSGT00940000162806.b.a.h #12 ENSGT00940000158959.a.a.a.b ##8 ENSGT00940000164492.a.a.f ENSGT00940000160620.w.b #7 ENSGT00940000164804.a.f ENSGT00940000157050.i.a.c ENSGT00940000157166.d.c ENSGT00940000161872.h #15 ENSGT00390000010652.D.a.b.d.a ##28 ENSGT00390000000259.k.a.c ENSGT00940000154539.a.b.b ENSGT00390000000475 River trout DUPLICATION River trout MODERN SPECIES 24 ap2m1a (ENSSTUG00000044679) dvl3a (ENSSTUG00000044755) ENSSTUG00000045094 copb2 (ENSSTUG00000045123) rbp1.1 (ENSSTUG00000045623) rbp1.1 (ENSSTUG00000045630) NMNAT3 (ENSSTUG00000045643) clstn2a (ENSSTUG00000045666) ENSSTUG00000046064 spsb4a (ENSSTUG00000046068) slc25a36a (ENSSTUG00000046079) MARCHF2 (ENSSTUG00000046167) rab11bb (ENSSTUG00000046172) TIMM44 (ENSSTUG00000046222) CTXN1 (ENSSTUG00000046563) uba52 (ENSSTUG00000046572) #22 HOMER3 (ENSSTUG00000046586) #33 upf1 (ENSSTUG00000046629) #30 pgpep1 (ENSSTUG00000047019) #14 jund (ENSSTUG00000047026) #12 RAB3A (ENSSTUG00000047034) ##8 ENSSTUG00000047068 mpv17l2 (ENSSTUG00000047103) #7 ifi30 (ENSSTUG00000047130) pik3r2 (ENSSTUG00000047153) MAST3 (ENSSTUG00000047232) ENSSTUG00000047248 #15 ENSSTUG00000047252 ENSSTUG00000047256 #28 crtc1a (ENSSTUG00000047259) ##28 MED26 (ENSSTUG00000047305) River trout MODERN SPECIES 14 DIRAS1 (ENSSTUG00000005660) gng7 (ENSSTUG00000005666) ENSSTUG00000005678 gadd45ba (ENSSTUG00000005680) ENSSTUG00000005700 ENSSTUG00000005711 palm1a (ENSSTUG00000005726) PLPPR3 (ENSSTUG00000005747) med16 (ENSSTUG00000005767) TMEM259 (ENSSTUG00000006159) GRIN3B (ENSSTUG00000007037) wdr18 (ENSSTUG00000007056) ENSSTUG00000007119 ENSSTUG00000007135 arrdc2 (ENSSTUG00000007140) uba52 (ENSSTUG00000007169) #22 homer3b (ENSSTUG00000007191) #33 upf1 (ENSSTUG00000007242) #30 PGPEP1 (ENSSTUG00000007436) #14 lsm4 (ENSSTUG00000007446) #13 JUND (ENSSTUG00000007468) #12 RAB3A (ENSSTUG00000007473) ##8 ENSSTUG00000007503 ENSSTUG00000007764 PIK3R2 (ENSSTUG00000007799) MAST3 (ENSSTUG00000007859) ENSSTUG00000008631 klhl26 (ENSSTUG00000008659) #27 ENSSTUG00000008670 ##28 comp (ENSSTUG00000008752) tmem38a (ENSSTUG00000010346) Atlantic salmon MODERN SPECIES 22 ENSSSAG00000099258 ap2m1 (ENSSSAG00000072141) ENSSSAG00000003034 ENSSSAG00000119258 copb2 (ENSSSAG00000002265) rbp1.1 (ENSSSAG00000084760) rbp1.1 (ENSSSAG00000002082) nmnat3 (ENSSSAG00000095565) clstn2a (ENSSSAG00000001846) spsb4a (ENSSSAG00000001822) slc25a36a (ENSSSAG00000101330) marh2 (ENSSSAG00000077903) rab11bb (ENSSSAG00000077887) ENSSSAG00000077766 ENSSSAG00000077747 uba52 (ENSSSAG00000077735) #22 ENSSSAG00000077729 #33 upf1 (ENSSSAG00000077507) #30 jund (ENSSSAG00000077470) #12 ENSSSAG00000085555 ##8 ENSSSAG00000077260 mpv17l2 (ENSSSAG00000077227) #7 ifi30 (ENSSSAG00000077221) pik3r2 (ENSSSAG00000076897) MAST3 (ENSSSAG00000076870) ENSSSAG00000076863 #15 crtc1a (ENSSSAG00000114938) ##28 ENSSSAG00000076841 ENSSSAG00000085774 ENSSSAG00000073308 ENSSSAG00000076582 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000153593.e.b.g.b.a #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153593.e.b.g.b.a #22 Coho salmon MODERN SPECIES 19 pcyt1aa (ENSOKIG00005050446) ap2m1a (ENSOKIG00005050452) dvl3a (ENSOKIG00005050468) ENSOKIG00005050484 copb2 (ENSOKIG00005050504) rbp1.1 (ENSOKIG00005050546) NMNAT3 (ENSOKIG00005050549) clstn2a (ENSOKIG00005050560) spsb4a (ENSOKIG00005050568) TIMM44 (ENSOKIG00005050575) slc25a36a (ENSOKIG00005050589) MARCHF2 (ENSOKIG00005050598) rab11bb (ENSOKIG00005050607) CTXN1 (ENSOKIG00005050616) ENSOKIG00005050619 uba52 (ENSOKIG00005050621) #22 HOMER3 (ENSOKIG00005050624) #33 upf1 (ENSOKIG00005050636) #30 pgpep1 (ENSOKIG00005050649) #14 jund (ENSOKIG00005050651) #12 RAB3A (ENSOKIG00005050655) ##8 ENSOKIG00005015505 ENSOKIG00005015543 ifi30 (ENSOKIG00005015563) pik3r2 (ENSOKIG00005015619) ENSOKIG00005015697 #15 crtc1a (ENSOKIG00005015704) ##28 MED26 (ENSOKIG00005015745) ENSOKIG00005015756 RPS15 (ENSOKIG00005015774) DPP9 (ENSOKIG00005015902) Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a.a ENSGT00940000154369.g.a.g ENSGT00940000158995.b.a ENSGT00940000163126.a.a.c ENSGT00390000000051.b.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b.g.b.b.a #22 ENSGT00940000158081.o.b.c #33 ENSGT00940000157413.h.b #30 ENSGT00390000015368.a.a.c.h #14 ENSGT00940000162806.b.a.g #12 ENSGT00940000158959.a.a.a.a ##8 ENSGT00940000164492.a.a.e ENSGT00940000160620.w.a #7 ENSGT00940000164804.a.e ENSGT00940000157050.i.a.d ENSGT00940000157166.d.d ENSGT00940000161872.g #15 ENSGT00390000010652.D.a.b.d.b ##28 ENSGT00390000000259.k.a.d ENSGT00940000154539.a.b.a ENSGT00390000006565.a.a Oncorhynchus ANCESTRAL SPECIES ENSGT00940000153593.e.b.g.b.b.a #22 Oncorhynchus_a ANCESTRAL SPECIES 37 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a.a ENSGT00940000154369.g.a.g ENSGT00940000158995.b.a ENSGT00940000163126.a.a.c ENSGT00390000000051.b.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b.g.b.b.a #22 ENSGT00940000158081.o.b.c #33 ENSGT00940000157413.h.b #30 ENSGT00390000015368.a.a.c.h #14 ENSGT00940000162806.b.a.g #12 ENSGT00940000158959.a.a.a.a ##8 ENSGT00940000164492.a.a.e ENSGT00940000160620.w.a #7 ENSGT00940000164804.a.e ENSGT00940000157050.i.a.d ENSGT00940000157166.d.d ENSGT00940000161872.g #15 ENSGT00390000010652.D.a.b.d.b ##28 ENSGT00390000000259.k.a.d ENSGT00940000154539.a.b.a ENSGT00940000158174.b.a Coho salmon MODERN SPECIES 23 ENSOKIG00005036801 SERP1 (ENSOKIG00005036785) pcyt1aa (ENSOKIG00005036745) AP2M1 (ENSOKIG00005036681) DVL3 (ENSOKIG00005036594) ENSOKIG00005035958 rbp1.1 (ENSOKIG00005035895) clstn2a (ENSOKIG00005034701) ENSOKIG00005034614 spsb4a (ENSOKIG00005034605) slc25a36a (ENSOKIG00005034598) MARCHF2 (ENSOKIG00005034573) rab11bb (ENSOKIG00005034516) TIMM44 (ENSOKIG00005034165) ENSOKIG00005034115 uba52 (ENSOKIG00005034082) #22 HOMER3 (ENSOKIG00005034071) #33 upf1 (ENSOKIG00005033533) #30 pgpep1 (ENSOKIG00005033478) #14 jund (ENSOKIG00005033465) #12 ENSOKIG00005033039 mpv17l2 (ENSOKIG00005033005) #7 ifi30 (ENSOKIG00005032978) pik3r2 (ENSOKIG00005032870) ENSOKIG00005032770 #15 crtc1a (ENSOKIG00005032750) ##28 MED26 (ENSOKIG00005032738) ENSOKIG00005032699 rps15 (ENSOKIG00005032599) DPP9 (ENSOKIG00005029450) angptl4 (ENSOKIG00005029272) Chinook salmon MODERN SPECIES 29 ENSOTSG00005025447 palm1a (ENSOTSG00005025449) PLPPR3 (ENSOTSG00005025451) med16 (ENSOTSG00005025455) TMEM259 (ENSOTSG00005025564) GRIN3B (ENSOTSG00005025619) ENSOTSG00005025623 wdr18 (ENSOTSG00005025628) ENSOTSG00005025633 ENSOTSG00005025636 ENSOTSG00005025639 sid1 (ENSOTSG00005025641) ENSOTSG00005025644 arrdc2 (ENSOTSG00005025646) ENSOTSG00005025647 uba52 (ENSOTSG00005025648) #22 homer3b (ENSOTSG00005025651) #33 upf1 (ENSOTSG00005025656) #30 PGPEP1 (ENSOTSG00005025707) #14 lsm4 (ENSOTSG00005025718) #13 JUND (ENSOTSG00005025720) #12 RAB3A (ENSOTSG00005025721) ##8 ENSOTSG00005025742 ENSOTSG00005026025 PIK3R2 (ENSOTSG00005026031) MAST3 (ENSOTSG00005026034) ENSOTSG00005026046 klhl26 (ENSOTSG00005026047) #27 ENSOTSG00005026048 ##28 comp (ENSOTSG00005026049) tmem38a (ENSOTSG00005026153) Salmo ANCESTRAL SPECIES 35 ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00990000213390 ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a.a ENSGT00940000154369.g.a.g ENSGT00940000158995.b.a ENSGT00940000163126.a.a.c ENSGT00390000000051.b.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.e.b.g.b.b.a #22 ENSGT00940000158081.o.b.c #33 ENSGT00940000157413.h.b #30 ENSGT00390000015368.a.a.c.h #14 ENSGT00940000162806.b.a.g #12 ENSGT00940000158959.a.a.a.a ##8 ENSGT00940000164492.a.a.e ENSGT00940000160620.w.a #7 ENSGT00940000164804.a.e ENSGT00940000157050.i.a.d ENSGT00940000157166.d.d ENSGT00940000161872.g #15 ENSGT00390000010652.D.a.b.d.b ##28 ENSGT00390000000259.k.a.d ENSGT00940000154539.a.b.a ENSGT00940000158174.b.a Atlantic salmon MODERN SPECIES 5 copb2 (ENSSSAG00000074067) RBP2 (ENSSSAG00000074042) RET1 (ENSSSAG00000074041) ENSSSAG00000074039 ENSSSAG00000111638 clstn2a (ENSSSAG00000073830) zgc:136870 (ENSSSAG00000073812) ENSSSAG00000087769 ENSSSAG00000073809 ENSSSAG00000087588 ENSSSAG00000086180 ENSSSAG00000073798 rab11bb (ENSSSAG00000107231) ENSSSAG00000073759 ENSSSAG00000073752 UBIQ (ENSSSAG00000073744) #22 ENSSSAG00000073735 #33 upf1 (ENSSSAG00000073685) #30 pgpep1 (ENSSSAG00000073672) #14 ENSSSAG00000084399 ##8 JUND (ENSSSAG00000073669) #12 ENSSSAG00000073643 mpv17l2 (ENSSSAG00000103221) #7 ifi30 (ENSSSAG00000073631) pik3r2 (ENSSSAG00000073374) MAST3 (ENSSSAG00000073352) ENSSSAG00000088811 #15 ENSSSAG00000076855 ##28 crtc1a (ENSSSAG00000099366) ##28 ENSSSAG00000073324 cnn2 (ENSSSAG00000076836) Salmoninae_a ANCESTRAL SPECIES 22 ENSGT01100000263497.E.a.b.l ENSGT00950000182964.a.b.b.a.b.a.f ENSGT00940000160221.c.f ENSGT00940000154739.B.b ENSGT00940000160580.a.c ENSGT00940000160280.c.g ENSGT00390000003821.c ENSGT00390000013329.d ENSGT00940000161021.a.a.c ENSGT00390000000289.j ENSGT00390000001700.b.h ENSGT00400000024256.a.a ENSGT01030000236342 ENSGT01000000222170 ENSGT00940000159994.h ENSGT00940000153593.e.b.g.b.b.b #22 ENSGT00940000158081.o.a.b #33 ENSGT00940000157413.g.b #30 ENSGT00390000015368.a.a.d.c #14 ENSGT00610000086173.f #13 ENSGT00940000162806.b.b.e #12 ENSGT00940000158959.a.a.b.b ##8 ENSGT00940000164492.a.b.f ENSGT00940000164804.b.h ENSGT00940000157050.i.b.b ENSGT00940000157166.c.f ENSGT01030000235156.d ENSGT00940000159238.n #27 ENSGT00390000010652.D.a.a.a ##28 ENSGT00940000166148.d ENSGT00390000018845.f.g Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000160221.c.f ENSGT00940000154739.B.b ENSGT00940000160580.a.c ENSGT00940000160280.c.g ENSGT00390000003821.c ENSGT00390000013329.d ENSGT00940000161021.a.a.c ENSGT01010000229558 ENSGT00390000000289.j ENSGT00390000001700.b.h ENSGT00400000024256.a.a ENSGT01030000236342 ENSGT01000000222170 ENSGT00940000159994.h ENSGT00940000177177 ENSGT00940000153593.e.b.g.b.b.b #22 ENSGT00940000158081.o.a.b #33 ENSGT00940000157413.g.b #30 ENSGT00390000015368.a.a.d.c #14 ENSGT00610000086173.f #13 ENSGT00940000162806.b.b.e #12 ENSGT00940000158959.a.a.b.b ##8 ENSGT00940000164492.a.b.f ENSGT00940000164804.b.h ENSGT00940000157050.i.b.b ENSGT00940000157166.c.f ENSGT01030000235156.d ENSGT00940000159238.n #27 ENSGT00390000010652.D.a.a.a ##28 ENSGT00940000166148.d ENSGT00390000018845.f.g Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 26 ENSOMYG00000031268 ENSOMYG00000031276 palm1a (ENSOMYG00000031314) ENSOMYG00000031329 ENSOMYG00000037206 med16 (ENSOMYG00000031351) TMEM259 (ENSOMYG00000031421) ENSOMYG00000031459 wdr18 (ENSOMYG00000031522) ENSOMYG00000031532 ENSOMYG00000031548 ENSOMYG00000031558 ENSOMYG00000031586 ENSOMYG00000055374 arrdc2 (ENSOMYG00000031621) ENSOMYG00000031649 #22 homer3b (ENSOMYG00000031714) #33 ENSOMYG00000064950 ENSOMYG00000031774 #30 ENSOMYG00000057284 pgpi (ENSOMYG00000031808) #14 ENSOMYG00000031820 #13 ENSOMYG00000056360 JUND (ENSOMYG00000031828) #12 ENSOMYG00000031840 ##8 ENSOMYG00000032067 ENSOMYG00000032481 PIK3R2 (ENSOMYG00000000711) ENSOMYG00000000795 ENSOMYG00000066531 ENSOMYG00000000876 Rainbow trout MODERN SPECIES 20 dvl3a (ENSOMYG00000046247) ENSOMYG00000046266 copb2 (ENSOMYG00000046308) rbp1.1 (ENSOMYG00000073442) rbp1.1 (ENSOMYG00000003879) NMNAT3 (ENSOMYG00000046471) clstn2a (ENSOMYG00000046517) spsb4a (ENSOMYG00000046561) ENSOMYG00000058056 slc25a36a (ENSOMYG00000046572) ENSOMYG00000046583 rab11bb (ENSOMYG00000046591) ENSOMYG00000046644 ENSOMYG00000046700 ENSOMYG00000059679 uba52 (ENSOMYG00000046709) #22 ENSOMYG00000046715 #33 upf1 (ENSOMYG00000046745) #30 pgpep1 (ENSOMYG00000046787) #14 jund (ENSOMYG00000046794) #12 ENSOMYG00000046795 ##8 ENSOMYG00000046814 ENSOMYG00000046828 ENSOMYG00000046833 ifi30 (ENSOMYG00000046840) pik3r2 (ENSOMYG00000046863) ENSOMYG00000046900 ENSOMYG00000077761 ENSOMYG00000046910 #15 crtc1a (ENSOMYG00000037586) ##28 ENSOMYG00000018974 Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000160221.c.f ENSGT00940000154739.B.b ENSGT00940000160580.a.c ENSGT00940000160280.c.g ENSGT00390000003821.c ENSGT00390000013329.d ENSGT00940000161021.a.a.c ENSGT01010000229558 ENSGT00390000000289.j ENSGT00390000001700.b.h ENSGT00400000024256.a.a ENSGT01030000236342 ENSGT01000000222170 ENSGT00940000159994.h ENSGT00940000177177 ENSGT00940000153593.e.b.g.b.b.b #22 ENSGT00940000158081.o.a.b #33 ENSGT00940000157413.g.b #30 ENSGT00390000015368.a.a.d.c #14 ENSGT00610000086173.f #13 ENSGT00940000162806.b.b.e #12 ENSGT00940000158959.a.a.b.b ##8 ENSGT00940000164492.a.b.f ENSGT00940000164804.b.h ENSGT00940000157050.i.b.b ENSGT00940000157166.c.f ENSGT01030000235156.d ENSGT00940000159238.n #27 ENSGT00390000010652.D.a.a.a ##28 ENSGT00940000166148.d ENSGT00390000018845.f.g Coho salmon MODERN SPECIES 4 ENSOKIG00005015060 palm1a (ENSOKIG00005015054) PLPPR3 (ENSOKIG00005015047) ENSOKIG00005015039 ENSOKIG00005015021 TMEM259 (ENSOKIG00005014972) GRIN3B (ENSOKIG00005014927) ENSOKIG00005014911 wdr18 (ENSOKIG00005014765) ENSOKIG00005014733 ENSOKIG00005014721 ENSOKIG00005014716 ENSOKIG00005014708 arrdc2 (ENSOKIG00005014686) ENSOKIG00005014668 ENSOKIG00005014654 #22 homer3b (ENSOKIG00005014600) #33 UPF1 (ENSOKIG00005014468) #30 PGPEP1 (ENSOKIG00005014447) #14 lsm4 (ENSOKIG00005014420) #13 JUND (ENSOKIG00005014414) #12 RAB3A (ENSOKIG00005014383) ##8 ENSOKIG00005014280 ENSOKIG00005014177 PIK3R2 (ENSOKIG00005014155) MAST3 (ENSOKIG00005013495) ENSOKIG00005013366 klhl26 (ENSOKIG00005013345) #27 ENSOKIG00005013320 ##28 comp (ENSOKIG00005013175) tmem38a (ENSOKIG00005013148) Salmo ANCESTRAL SPECIES 14 ENSGT00940000159915.a.a ENSGT01100000263497.E.a.b.l ENSGT00950000182964.a.b.b.a.b.a.f ENSGT00940000160221.c.f ENSGT00940000154739.B.b ENSGT00940000160580.a.c ENSGT00940000160280.c.g ENSGT00390000003821.c ENSGT00390000013329.d ENSGT00940000161021.a.a.c ENSGT00390000000289.j ENSGT00390000001700.b.h ENSGT00400000024256.a.a ENSGT01000000222170 ENSGT00940000159994.h ENSGT00940000153593.e.b.g.b.b.b #22 ENSGT00940000158081.o.a.b #33 ENSGT00940000157413.g.b #30 ENSGT00390000015368.a.a.d.c #14 ENSGT00610000086173.f #13 ENSGT00940000162806.b.b.e #12 ENSGT00940000158959.a.a.b.b ##8 ENSGT00940000164492.a.b.f ENSGT00940000164804.b.h ENSGT00940000157050.i.b.b ENSGT00940000157166.c.f ENSGT01030000235156.d ENSGT00940000159238.n #27 ENSGT00390000010652.D.a.a.a ##28 ENSGT00940000166148.d ENSGT00390000018845.f.g Atlantic salmon MODERN SPECIES 1 GA45B (ENSSSAG00000047387) ENSSSAG00000047394 ENSSSAG00000047401 palm1a (ENSSSAG00000108305) ENSSSAG00000047421 med16 (ENSSSAG00000047451) TMEM259 (ENSSSAG00000047928) ENSSSAG00000049563 wdr18 (ENSSSAG00000049586) ENSSSAG00000049662 ENSSSAG00000117874 ENSSSAG00000114022 ENSSSAG00000083252 arrd3 (ENSSSAG00000049687) homer3b (ENSSSAG00000049761) #33 UBIQ (ENSSSAG00000049739) #22 ENSSSAG00000121675 ENSSSAG00000049783 #32 ENSSSAG00000049797 #30 PGPEP1 (ENSSSAG00000096516) #14 ENSSSAG00000049930 #13 JUND (ENSSSAG00000084562) #12 ENSSSAG00000095803 ##8 ENSSSAG00000050237 ENSSSAG00000118394 ENSSSAG00000057741 PIK3R2 (ENSSSAG00000057788) ENSSSAG00000089110 ENSSSAG00000059199 ENSSSAG00000061284 klhl26 (ENSSSAG00000061318) #27 Salmoninae ANCESTRAL SPECIES 76 ENSGT00940000161729.m.a.b ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a ENSGT00940000159675.a ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b.d ENSGT01030000234629.C.a.b ENSGT00940000154369.g.a.h ENSGT00940000158995.b.b ENSGT00940000163126.a.a.d ENSGT00390000000051.b.a ENSGT00940000154412.C.c.a ENSGT00940000153593.e.b.h #22 ENSGT00940000158081.o.b.d #33 ENSGT00940000157413.h.a #30 ENSGT00390000015368.a.a.c.g #14 ENSGT00940000162806.b.a.h #12 ENSGT00940000158959.a.a.a.b ##8 ENSGT00940000164492.a.a.f ENSGT00940000160620.w.b #7 ENSGT00940000164804.a.f ENSGT00940000157050.i.a.c ENSGT00940000157166.d.c ENSGT00940000161872.h #15 ENSGT00390000010652.D.a.b.d.a ##28 ENSGT00390000000259.k.a.c ENSGT00940000154539.a.b.b ENSGT00390000000475 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000153593.e.b.h #22 Salmo ANCESTRAL SPECIES ENSGT00940000153593.e.b.h #22 River trout MODERN SPECIES 8 gadd45ba (ENSSTUG00000005525) ENSSTUG00000005546 CARTPT (ENSSTUG00000005577) MAP1S (ENSSTUG00000005591) ENSSTUG00000005606 palm1a (ENSSTUG00000005617) PLPPR3 (ENSSTUG00000005635) med16 (ENSSTUG00000005659) TMEM259 (ENSSTUG00000005805) GRIN3B (ENSSTUG00000005872) wdr18 (ENSSTUG00000005911) ENSSTUG00000006035 ifi44f5 (ENSSTUG00000006039) ENSSTUG00000006048 arrdc2 (ENSSTUG00000006083) uba52 (ENSSTUG00000006141) #22 homer3b (ENSSTUG00000006158) #33 ddx49 (ENSSTUG00000006214) #32 upf1 (ENSSTUG00000007068) #30 PGPEP1 (ENSSTUG00000007171) #14 lsm4 (ENSSTUG00000007179) #13 JUND (ENSSTUG00000007197) #12 RAB3A (ENSSTUG00000007204) ##8 ENSSTUG00000007224 #7 ENSSTUG00000007254 ENSSTUG00000007816 PIK3R2 (ENSSTUG00000007836) MAST3 (ENSSTUG00000007992) ENSSTUG00000008065 klhl26 (ENSSTUG00000008084) #27 CRTC1 (ENSSTUG00000008092) ##28 Huchen MODERN SPECIES 430 spsb4a (ENSHHUG00000013651) slc25a36a (ENSHHUG00000013659) MARCHF2 (ENSHHUG00000013667) rab11bb (ENSHHUG00000013675) TIMM44 (ENSHHUG00000013704) CTXN1 (ENSHHUG00000013737) ENSHHUG00000013743 uba52 (ENSHHUG00000013789) #22 HOMER3 (ENSHHUG00000014096) #33 upf1 (ENSHHUG00000014328) #30 pgpep1 (ENSHHUG00000014353) #14 jund (ENSHHUG00000014358) #12 RAB3A (ENSHHUG00000014367) ##8 ENSHHUG00000014434 ifi30 (ENSHHUG00000014453) pik3r2 (ENSHHUG00000014480) MAST3 (ENSHHUG00000014602) ENSHHUG00000014609 ENSHHUG00000014634 ENSHHUG00000014650 #15 ENSHHUG00000014665 ##28 crtc1a (ENSHHUG00000014671) ##28 MED26 (ENSHHUG00000014676) Euteleosteomorpha ANCESTRAL SPECIES 109 ENSGT00940000160580.a ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00940000160624 ENSGT00940000154208.c.a ENSGT00940000153496.a.b.b ENSGT00940000160560.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000157166.c ENSGT01030000235156 ENSGT00390000010652.D.a.a ##28 Protacanthopterygii ANCESTRAL SPECIES 13 ENSGT00940000154739.B ENSGT00940000160580.a ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00390000001700.b.h ENSGT00400000024256 ENSGT00940000161753 ENSGT01030000236342 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00730000113192 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a.b ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000157166.c ENSGT01030000235156 ENSGT00940000159238 #27 ENSGT00390000010652.D.a.a.b ##28 Northern pike MODERN SPECIES 7 lim2.2 (ENSELUG00000013541) asb3 (ENSELUG00000013521) ftsj3 (ENSELUG00000013501) plaat1 (ENSELUG00000013476) PLPPR3 (ENSELUG00000013453) med16 (ENSELUG00000013427) TMEM259 (ENSELUG00000013393) GRIN3B (ENSELUG00000013335) wdr18 (ENSELUG00000013303) ENSELUG00000013279 ifi44f5 (ENSELUG00000013242) ENSELUG00000013202 ENSELUG00000013176 arrdc2 (ENSELUG00000013152) ENSELUG00000013106 uba52 (ENSELUG00000026275) #22 homer3b (ENSELUG00000013029) #33 ddx49 (ENSELUG00000012963) #32 upf1 (ENSELUG00000012916) #30 PGPEP1 (ENSELUG00000025651) #14 lsm4 (ENSELUG00000012821) #13 RAB3A (ENSELUG00000012788) ##8 JUND (ENSELUG00000012800) #12 MPV17L2 (ENSELUG00000012773) #7 ENSELUG00000012692 ENSELUG00000012553 PIK3R2 (ENSELUG00000012532) MAST3 (ENSELUG00000012497) ENSELUG00000012460 klhl26 (ENSELUG00000012419) #27 CRTC1 (ENSELUG00000012385) ##28 Salmoninae ANCESTRAL SPECIES 30 ENSGT00940000159915.b ENSGT01100000263497.E.a.b ENSGT00950000182964.a.b.b.a.b.a.f ENSGT00940000160221.c.f ENSGT00940000154739.B.b ENSGT00940000160580.a.c ENSGT00940000160280.c.g ENSGT00390000003821.c ENSGT00390000013329.d ENSGT00940000161021.a.a.c ENSGT00390000000289.j ENSGT00390000001700.b.h ENSGT00400000024256.a.a ENSGT01030000236342 ENSGT00940000159994.h ENSGT00940000153593.f #22 ENSGT00940000158081.o.a.b #33 ENSGT00940000157413.g.b #30 ENSGT00390000015368.a.a.d.c #14 ENSGT00610000086173.f #13 ENSGT00940000162806.b.b.e #12 ENSGT00940000158959.a.a.b.b ##8 ENSGT00940000164492.a.b.f ENSGT00940000164804.b.h ENSGT00940000157050.i.b.b ENSGT00940000157166.c.f ENSGT01030000235156.d ENSGT00940000159238.n #27 ENSGT00390000010652.D.a.a.a ##28 ENSGT00940000166148.d ENSGT00390000018845.f.g Huchen DUPLICATION Huchen MODERN SPECIES 188 ENSHHUG00000028551 ENSHHUG00000028552 palm1a (ENSHHUG00000028569) PLPPR3 (ENSHHUG00000028607) med16 (ENSHHUG00000028623) ENSHHUG00000028887 TMEM259 (ENSHHUG00000028892) GRIN3B (ENSHHUG00000028903) wdr18 (ENSHHUG00000028913) ENSHHUG00000028930 ifi44f1 (ENSHHUG00000028936) ENSHHUG00000028940 ENSHHUG00000028941 arrdc2 (ENSHHUG00000028943) ENSHHUG00000028960 uba52 (ENSHHUG00000028963) #22 homer3b (ENSHHUG00000028993) #33 ddx49 (ENSHHUG00000029027) #32 upf1 (ENSHHUG00000029086) #30 PGPEP1 (ENSHHUG00000029110) #14 lsm4 (ENSHHUG00000029116) #13 JUND (ENSHHUG00000029120) #12 RAB3A (ENSHHUG00000029121) ##8 ENSHHUG00000029125 #7 ENSHHUG00000029126 Huchen MODERN SPECIES 905 wdr18 (ENSHHUG00000014942) ENSHHUG00000015031 ENSHHUG00000015037 ENSHHUG00000015046 arrdc2 (ENSHHUG00000015063) uba52 (ENSHHUG00000015157) #22 homer3b (ENSHHUG00000015199) #33 ddx49 (ENSHHUG00000015246) #32 upf1 (ENSHHUG00000015262) #30 PGPEP1 (ENSHHUG00000015304) #14 lsm4 (ENSHHUG00000015317) #13 JUND (ENSHHUG00000015343) #12 RAB3A (ENSHHUG00000015347) ##8 Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.b ENSGT00940000165866.p.b.a ENSGT00940000159994.g ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00730000113192 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000164492.a.b.e ENSGT00940000164804.b.g ENSGT00940000157050.i.b.a ENSGT00940000157166.c.e ENSGT01030000235156.c ENSGT00940000159238.m #27 ENSGT00390000010652.D.a.a.b ##28 Salmo ANCESTRAL SPECIES 9 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000160221.c.e ENSGT00940000154739.B.a ENSGT00940000160580.a.d ENSGT00940000160280.c.h ENSGT00390000003821.d ENSGT00390000013329.c ENSGT00940000161021.a.a.d ENSGT00390000000289.i ENSGT00400000024256.a.b ENSGT00940000163581.f.a ENSGT00940000165866.p.b.b ENSGT00940000159994.g ENSGT00940000177177 ENSGT00730000113192 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g.a #30 ENSGT00390000015368.a.a.d.d #14 ENSGT00610000086173.e #13 ENSGT00940000162806.b.b.f #12 ENSGT00940000158959.a.a.b.a ##8 ENSGT00940000160620.x #7 ENSGT00940000164492.a.b.e ENSGT00940000164804.b.g ENSGT00940000157050.i.b.a ENSGT00940000157166.c.e ENSGT01030000235156.c ENSGT00940000159238.m #27 ENSGT00390000010652.D.a.a.b ##28 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 7 ENSSSAG00000109883 palm1a (ENSSSAG00000087437) ENSSSAG00000073242 med16 (ENSSSAG00000073091) TMEM259 (ENSSSAG00000072950) ENSSSAG00000072942 wdr18 (ENSSSAG00000072933) ENSSSAG00000120356 ENSSSAG00000072924 ENSSSAG00000087170 ENSSSAG00000072910 ENSSSAG00000112439 ENSSSAG00000072902 ENSSSAG00000111888 cssa16h19orf45 (ENSSSAG00000072892) ENSSSAG00000072884 #22 ENSSSAG00000072875 #33 ddx49 (ENSSSAG00000072870) #32 ENSSSAG00000072790 #30 PGPEP1 (ENSSSAG00000114127) #14 LSM4 (ENSSSAG00000072783) #13 JUND (ENSSSAG00000072781) #12 ENSSSAG00000091448 ##8 ENSSSAG00000072776 #7 ENSSSAG00000067465 ENSSSAG00000087757 ENSSSAG00000065299 ENSSSAG00000065322 klhl26 (ENSSSAG00000065285) #27 ENSSSAG00000091870 ##28 comp (ENSSSAG00000064969) Atlantic salmon MODERN SPECIES 15 ENSSSAG00000059594 ENSSSAG00000087153 ENSSSAG00000081960 rergl (ENSSSAG00000008758) lmo3 (ENSSSAG00000116225) ENSSSAG00000008790 PSA1 (ENSSSAG00000008811) ENSSSAG00000008858 INSC (ENSSSAG00000008922) ENSSSAG00000009061 ENSSSAG00000009137 ENSSSAG00000094151 zgc:56106 (ENSSSAG00000009449) plekha7a (ENSSSAG00000115025) ppp1r15b (ENSSSAG00000009455) UBIQ (ENSSSAG00000096450) #22 RPS13 (ENSSSAG00000009467) ENSSSAG00000009533 NUCB2 (ENSSSAG00000010239) ENSSSAG00000120931 ENSSSAG00000106656 ENSSSAG00000089028 ENSSSAG00000100821 slc15a5 (ENSSSAG00000079888) ENSSSAG00000114749 ENSSSAG00000105119 ENSSSAG00000079873 ush1c (ENSSSAG00000079842) abcc8 (ENSSSAG00000079354) mob2a (ENSSSAG00000082445) dusp8a (ENSSSAG00000109305) Atlantic salmon MODERN SPECIES 14 ENSSSAG00000052937 ENSSSAG00000052948 nab2 (ENSSSAG00000052956) ENSSSAG00000052966 ENSSSAG00000052975 ENSSSAG00000105606 ENSSSAG00000053014 ENSSSAG00000053034 ENSSSAG00000053108 ENSSSAG00000044769 ENSSSAG00000044596 maf1a (ENSSSAG00000063603) trib3 (ENSSSAG00000044438) ENSSSAG00000094663 ENSSSAG00000102256 ENSSSAG00000063626 #22 pnp4a (ENSSSAG00000063631) ENSSSAG00000063644 ENSSSAG00000063653 ENSSSAG00000063664 ENSSSAG00000063762 ENSSSAG00000113111 un119 (ENSSSAG00000064610) ENSSSAG00000064614 ENSSSAG00000064624 tctn1 (ENSSSAG00000064633) ENSSSAG00000064645 plpp5 (ENSSSAG00000064670) ENSSSAG00000064679 ENSSSAG00000052930 ENSSSAG00000116272 Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00950000183086.a.a.b.h.b.c ENSGT00940000162556.D.b.a ENSGT01030000234629.C.a.a ENSGT00940000154369.g.a.g ENSGT00940000158995.b.a ENSGT00940000163126.a.a.c ENSGT00390000000051.b.b ENSGT01030000234515.a.b.b.b ENSGT00940000153593.f #22 ENSGT00940000158081.o.b.c #33 ENSGT00940000157413.h.b #30 ENSGT00390000015368.a.a.c.h #14 ENSGT00940000162806.b.a.g #12 ENSGT00940000158959.a.a.a.a ##8 ENSGT00940000164492.a.a.e ENSGT00940000160620.w.a #7 ENSGT00940000164804.a.e ENSGT00940000157050.i.a.d ENSGT00940000157166.d.d ENSGT00940000161872.g #15 ENSGT00390000010652.D.a.b.d.b ##28 ENSGT00390000000259.k.a.d ENSGT00940000154539.a.b.a ENSGT00940000158174.b.a Rainbow trout MODERN SPECIES 29 ENSOMYG00000076782 ENSOMYG00000058103 pcyt1aa (ENSOMYG00000004765) ap2m1 (ENSOMYG00000004709) ENSOMYG00000004665 copb2 (ENSOMYG00000004282) rbp1 (ENSOMYG00000068944) clstn2a (ENSOMYG00000003476) spsb4a (ENSOMYG00000003071) slc25a36a (ENSOMYG00000003050) ENSOMYG00000073077 rb11a (ENSOMYG00000003016) ENSOMYG00000002736 ENSOMYG00000076562 ENSOMYG00000002163 uba52 (ENSOMYG00000002136) #22 ENSOMYG00000002121 #33 upf1 (ENSOMYG00000002069) #30 pgpep1 (ENSOMYG00000001889) #14 jund (ENSOMYG00000001855) #12 ENSOMYG00000001849 ##8 ENSOMYG00000001762 mpv17l2 (ENSOMYG00000001579) #7 ifi30 (ENSOMYG00000001539) pik3r2 (ENSOMYG00000001470) MAST3 (ENSOMYG00000001409) ENSOMYG00000013304 #15 crtc1a (ENSOMYG00000013246) ##28 ENSOMYG00000013223 ENSOMYG00000013200 ENSOMYG00000013147 Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00950000183167.a.b.b.b.r ENSGT01020000230633.a ENSGT00390000006330.a.b.a ENSGT00940000155637.jb ENSGT00940000156785.`b ENSGT00940000154347.a.d ENSGT00530000063853.a.a.a.e ENSGT00400000022103.b.b ENSGT00890000139515.d ENSGT00940000159236.e ENSGT00390000014944.a.b ENSGT00940000166000.b ENSGT00390000006896.x.b ENSGT00950000182986.a.a.o ENSGT00940000161470.b.a ENSGT00940000153593.f #22 ENSGT00940000166479 ENSGT00940000157830.c.b ENSGT00390000000860.b.b.h ENSGT01100000263893.b ENSGT00940000156515.b.b ENSGT00390000014595.b.a.b ENSGT00940000158425.b.a ENSGT00940000159403.d ENSGT00570000079101.a.b ENSGT00940000156818.ac ENSGT00940000159772.m ENSGT00940000156808.db.a ENSGT00940000156991.b ENSGT00940000156991.a.a.e ENSGT00940000155874.b.e Coho salmon MODERN SPECIES 25 nab2 (ENSOKIG00005037228) ENSOKIG00005037240 ENSOKIG00005037274 ENSOKIG00005037391 SYS1 (ENSOKIG00005037401) ENSOKIG00005037422 ENSOKIG00005037447 ENSOKIG00005037476 ARFGAP1 (ENSOKIG00005037522) ELMO2 (ENSOKIG00005037854) TBC1D20 (ENSOKIG00005040844) ENSOKIG00005040930 ENSOKIG00005041051 TRIB3 (ENSOKIG00005041069) ENSOKIG00005041080 ENSOKIG00005041086 #22 ENSOKIG00005041113 ENSOKIG00005041146 FAM219A (ENSOKIG00005041193) ENSOKIG00005041337 MSI1 (ENSOKIG00005041356) ENSOKIG00005041433 ENSOKIG00005000035 crybb3 (ENSOKIG00005000047) hvcn1 (ENSOKIG00005000062) ENSOKIG00005000076 ENSOKIG00005000093 plpp5 (ENSOKIG00005000185) ENSOKIG00005000206 ENSOKIG00005000233 loxl2a (ENSOKIG00005000328) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 31 ENSOTSG00005038912 ENSOTSG00005038913 nab2 (ENSOTSG00005038916) ENSOTSG00005015536 ENSOTSG00005015537 sys1 (ENSOTSG00005015538) ENSOTSG00005015539 ENSOTSG00005015542 arfgap1 (ENSOTSG00005015544) ELMO2 (ENSOTSG00005015554) tbc1d20 (ENSOTSG00005020687) rbck1 (ENSOTSG00005020688) maf1a (ENSOTSG00005020689) trib3 (ENSOTSG00005020690) ENSOTSG00005020691 uba52 (ENSOTSG00005020692) #22 ENSOTSG00005020693 rem1 (ENSOTSG00005020695) FAM219A (ENSOTSG00005020697) ENSOTSG00005020823 MSI1 (ENSOTSG00005020826) ENSOTSG00005021291 crybb3 (ENSOTSG00005021293) hvcn1 (ENSOTSG00005021296) ENSOTSG00005021298 plpp5 (ENSOTSG00005021300) ENSOTSG00005021302 ENSOTSG00005021303 ENSOTSG00005021304 loxl2a (ENSOTSG00005021305) ENSOTSG00005022168 Chinook salmon MODERN SPECIES 1 SERP1 (ENSOTSG00005035228) pcyt1aa (ENSOTSG00005035227) AP2M1 (ENSOTSG00005035211) DVL3 (ENSOTSG00005035208) copb2 (ENSOTSG00005034708) rbp2b (ENSOTSG00005034699) rbp1.1 (ENSOTSG00005034697) clstn2a (ENSOTSG00005034298) zgc:136870 (ENSOTSG00005034297) spsb4a (ENSOTSG00005034296) slc25a36a (ENSOTSG00005034288) MARCHF2 (ENSOTSG00005034282) rab11bb (ENSOTSG00005034280) TIMM44 (ENSOTSG00005032758) ENSOTSG00005032740 uba52 (ENSOTSG00005032711) #22 HOMER3 (ENSOTSG00005032705) #33 upf1 (ENSOTSG00005032079) #30 pgpep1 (ENSOTSG00005032074) #14 jund (ENSOTSG00005032073) #12 RAB3A (ENSOTSG00005032072) ##8 ENSOTSG00005032068 mpv17l2 (ENSOTSG00005032066) #7 ifi30 (ENSOTSG00005032065) pik3r2 (ENSOTSG00005031258) MAST3 (ENSOTSG00005031247) ENSOTSG00005031245 #15 crtc1a (ENSOTSG00005031243) ##28 MED26 (ENSOTSG00005031241) ENSOTSG00005031240 rps15 (ENSOTSG00005031092) Acanthomorphata ANCESTRAL SPECIES 56 ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00940000166941 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000169112 Cod MODERN SPECIES 3 ENSGMOG00000015905 ENSGMOG00000015856 pfas (ENSGMOG00000015735) ENSGMOG00000030369 hook1 (ENSGMOG00000015695) cyp2n13 (ENSGMOG00000015680) ENSGMOG00000007624 ENSGMOG00000023141 ENSGMOG00000026525 ENSGMOG00000027167 ENSGMOG00000007530 ENSGMOG00000027260 ENSGMOG00000007619 ENSGMOG00000007606 ENSGMOG00000007586 ENSGMOG00000007581 #22 ENSGMOG00000007563 #33 ENSGMOG00000007556 #32 ENSGMOG00000007541 #30 ENSGMOG00000007534 #14 ENSGMOG00000011179 ##8 ENSGMOG00000020384 #12 ENSGMOG00000007729 #13 MPV17L2 (ENSGMOG00000007743) #7 ENSGMOG00000024339 anapc4 (ENSGMOG00000007748) slain2 (ENSGMOG00000007759) SLC10A4 (ENSGMOG00000007764) zar1 (ENSGMOG00000031523) fryl (ENSGMOG00000007772) dcun1d4 (ENSGMOG00000007786) Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00940000155152.f.b ENSGT00940000160615.b.c.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b Cichlidae ANCESTRAL SPECIES 17 ENSGT00940000163581.f.a.g ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000153593.f #22 Nile tilapia MODERN SPECIES 6 ENSONIG00000033680 lbr (ENSONIG00000011417) ephx1 (ENSONIG00000011420) ENSONIG00000028376 tnfrsf21 (ENSONIG00000006450) cd2ap (ENSONIG00000006440) ENSONIG00000027108 ENSONIG00000030257 tmpoa (ENSONIG00000042900) strap (ENSONIG00000012758) ENSONIG00000012755 large1 (ENSONIG00000012751) ENSONIG00000033135 ENSONIG00000040496 ENSONIG00000012747 uba52 (ENSONIG00000012741) #22 arrdc2 (ENSONIG00000012745) homer3b (ENSONIG00000012736) #33 ddx49 (ENSONIG00000012731) #32 upf1 (ENSONIG00000012729) #30 PGPEP1 (ENSONIG00000027578) #14 lsm4 (ENSONIG00000012724) #13 ENSONIG00000042827 RNF213 (ENSONIG00000012722) JUND (ENSONIG00000021047) #12 RAB3A (ENSONIG00000039875) ##8 mpv17l2 (ENSONIG00000012718) #7 ENSONIG00000012712 ENSONIG00000012705 PIK3R2 (ENSONIG00000012700) ENSONIG00000038195 Midas cichlid MODERN SPECIES 135 ENSACIG00000011306 arrdc2 (ENSACIG00000011284) ENSACIG00000011271 uba52 (ENSACIG00000011090) #22 homer3b (ENSACIG00000011066) #33 ddx49 (ENSACIG00000011029) #32 upf1 (ENSACIG00000010985) #30 PGPEP1 (ENSACIG00000010964) #14 ENSACIG00000010951 ENSACIG00000010934 JUND (ENSACIG00000010927) #12 RAB3A (ENSACIG00000010910) ##8 mpv17l2 (ENSACIG00000010883) #7 ENSACIG00000010872 ENSACIG00000010754 ENSACIG00000010633 ENSACIG00000010594 PIK3R2 (ENSACIG00000010325) kank3 (ENSACIG00000010283) Pomacentridae ANCESTRAL SPECIES 16 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00980000199531 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b Bicolor damselfish MODERN SPECIES 700 arrdc2 (ENSSPAG00000011266) ENSSPAG00000011293 uba52 (ENSSPAG00000011306) #22 homer3b (ENSSPAG00000011339) #33 ddx49 (ENSSPAG00000011486) #32 upf1 (ENSSPAG00000011521) #30 PGPEP1 (ENSSPAG00000011586) #14 lsm4 (ENSSPAG00000011615) #13 ENSSPAG00000011634 ENSSPAG00000011646 JUND (ENSSPAG00000011651) #12 RAB3A (ENSSPAG00000011661) ##8 mpv17l2 (ENSSPAG00000011675) #7 ENSSPAG00000011694 ENSSPAG00000011708 ENSSPAG00000011766 ENSSPAG00000012036 ENSSPAG00000012052 Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f Oryzias ANCESTRAL SPECIES 5 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.e ENSGT00940000163581.f.a.f.b ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a ENSGT00940000156757.h Oryzias_a ANCESTRAL SPECIES 14 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.e ENSGT00940000163581.f.a.f.b.c ENSGT00940000163581.f.a.f.b.d ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a ENSGT00940000156757.h Japanese Medaka HdrR MODERN SPECIES 18 crb1 (ENSORLG00000008716) ENSORLG00000008702 nphs2 (ENSORLG00000008690) ENSORLG00000025711 ENSORLG00000026947 fam163ab (ENSORLG00000029449) RABGAP1L (ENSORLG00000008679) ENSORLG00000000696 ENSORLG00000008608 ENSORLG00000030184 ENSORLG00000026893 ENSORLG00000027011 ENSORLG00000027804 arrdc2 (ENSORLG00000008572) ENSORLG00000028736 uba52 (ENSORLG00000008546) #22 homer3b (ENSORLG00000008531) #33 ddx49 (ENSORLG00000008509) #32 upf1 (ENSORLG00000008453) #30 PGPEP1 (ENSORLG00000008398) #14 lsm4 (ENSORLG00000008391) #13 JUND (ENSORLG00000008379) #12 RAB3A (ENSORLG00000008371) ##8 mpv17l2 (ENSORLG00000008346) #7 ENSORLG00000008341 ENSORLG00000008333 ENSORLG00000024065 kank3 (ENSORLG00000008326) ENSORLG00000023396 dpp9 (ENSORLG00000008308) dazap1 (ENSORLG00000008278) Chinese medaka MODERN SPECIES 616 arrdc2 (ENSOSIG00000020171) ENSOSIG00000020172 uba52 (ENSOSIG00000020176) #22 homer3b (ENSOSIG00000020181) #33 ddx49 (ENSOSIG00000020191) #32 upf1 (ENSOSIG00000020224) #30 PGPEP1 (ENSOSIG00000020375) #14 lsm4 (ENSOSIG00000020376) #13 ENSOSIG00000020378 mpv17l2 (ENSOSIG00000020381) #7 RAB3A (ENSOSIG00000020384) ##8 ENSOSIG00000020429 ENSOSIG00000020512 ENSOSIG00000020514 kank3 (ENSOSIG00000020519) dpp9 (ENSOSIG00000020541) ENSOSIG00000021313 dazap1 (ENSOSIG00000021318) Oryzias_b ANCESTRAL SPECIES 15 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.e ENSGT00940000163581.f.a.f.b.a.b ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a ENSGT00940000156757.h Indian medaka MODERN SPECIES 13 ENSOMEG00000004183 ENSOMEG00000004156 ENSOMEG00000004136 ENSOMEG00000004075 ENSOMEG00000004053 ENSOMEG00000004044 ENSOMEG00000004032 ENSOMEG00000004019 ENSOMEG00000004005 ENSOMEG00000003965 ENSOMEG00000003940 ENSOMEG00000000087 ENSOMEG00000003836 ENSOMEG00000003822 arrdc2 (ENSOMEG00000003802) uba52 (ENSOMEG00000003772) #22 homer3b (ENSOMEG00000003754) #33 ddx49 (ENSOMEG00000003733) #32 upf1 (ENSOMEG00000003665) #30 PGPEP1 (ENSOMEG00000003628) #14 lsm4 (ENSOMEG00000003606) #13 JUND (ENSOMEG00000003597) #12 RAB3A (ENSOMEG00000003588) ##8 mpv17l2 (ENSOMEG00000003572) #7 ENSOMEG00000003545 ENSOMEG00000003444 ENSOMEG00000003403 kank3 (ENSOMEG00000003200) dpp9 (ENSOMEG00000003168) dazap1 (ENSOMEG00000003120) gamt (ENSOMEG00000003067) Javanese ricefish MODERN SPECIES 18 ENSOJAG00000014699 fam163ab (ENSOJAG00000014683) GPR52 (ENSOJAG00000014660) RABGAP1L (ENSOJAG00000012720) ENSOJAG00000012487 ENSOJAG00000012275 ENSOJAG00000012160 ENSOJAG00000012120 ENSOJAG00000012114 ENSOJAG00000012041 ENSOJAG00000011998 ENSOJAG00000011953 ENSOJAG00000011919 ENSOJAG00000011901 arrdc2 (ENSOJAG00000011854) uba52 (ENSOJAG00000011808) #22 homer3b (ENSOJAG00000011765) #33 ddx49 (ENSOJAG00000011686) #32 upf1 (ENSOJAG00000010854) #30 PGPEP1 (ENSOJAG00000010774) #14 lsm4 (ENSOJAG00000010743) #13 JUND (ENSOJAG00000010719) #12 RAB3A (ENSOJAG00000010700) ##8 mpv17l2 (ENSOJAG00000010670) #7 ENSOJAG00000010597 ENSOJAG00000010563 ENSOJAG00000010284 kank3 (ENSOJAG00000010266) ENSOJAG00000010243 dpp9 (ENSOJAG00000009917) gamt (ENSOJAG00000009869) Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000154611.bd ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00940000167793 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a ENSGT00940000156757 Mangrove rivulus MODERN SPECIES 25 ENSKMAG00000004173 nek7 (ENSKMAG00000004265) lhx9 (ENSKMAG00000004285) si:dkey-121a9.3 (ENSKMAG00000004323) DENND1B (ENSKMAG00000004337) crb1 (ENSKMAG00000004369) ENSKMAG00000004462 nphs2 (ENSKMAG00000004491) ENSKMAG00000004523 fam163ab (ENSKMAG00000004555) RABGAP1L (ENSKMAG00000004575) ifi44f1 (ENSKMAG00000004691) ENSKMAG00000004804 arrdc2 (ENSKMAG00000004825) ENSKMAG00000004838 uba52 (ENSKMAG00000004847) #22 homer3b (ENSKMAG00000004866) #33 ddx49 (ENSKMAG00000004909) #32 upf1 (ENSKMAG00000004962) #30 PGPEP1 (ENSKMAG00000005046) #14 lsm4 (ENSKMAG00000005073) #13 JUND (ENSKMAG00000005081) #12 RAB3A (ENSKMAG00000005094) ##8 mpv17l2 (ENSKMAG00000005132) #7 ENSKMAG00000005250 ENSKMAG00000005384 PIK3R2 (ENSKMAG00000005406) kank3 (ENSKMAG00000005446) ENSKMAG00000005506 ENSKMAG00000005527 dpp9 (ENSKMAG00000005567) Cyprinodontoidei ANCESTRAL SPECIES 61 ENSGT00940000154611.bd ENSGT00940000163581.f.a.c ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000181476 NAME_4 ANCESTRAL SPECIES 121 ENSGT00940000158821.n ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00940000159228.a.a ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.c ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000181476 Sheepshead minnow MODERN SPECIES 323 frem2a (ENSCVAG00000009669) ufm1 (ENSCVAG00000009677) trpc4a (ENSCVAG00000009721) POSTN (ENSCVAG00000010163) ugt5d1 (ENSCVAG00000010174) ugt5d1 (ENSCVAG00000010182) SUPT20H (ENSCVAG00000010238) exosc8 (ENSCVAG00000010277) alg5 (ENSCVAG00000010317) ENSCVAG00000010340 rfxap (ENSCVAG00000010344) DCLK1 (ENSCVAG00000010364) ENSCVAG00000010378 ENSCVAG00000000288 arrdc2 (ENSCVAG00000010398) uba52 (ENSCVAG00000010415) #22 homer3b (ENSCVAG00000010423) #33 ddx49 (ENSCVAG00000010466) #32 upf1 (ENSCVAG00000010561) #30 PGPEP1 (ENSCVAG00000010583) #14 lsm4 (ENSCVAG00000010601) #13 JUND (ENSCVAG00000010614) #12 RAB3A (ENSCVAG00000000295) ##8 mpv17l2 (ENSCVAG00000010639) #7 ENSCVAG00000010650 ENSCVAG00000010684 ENSCVAG00000010693 ENSCVAG00000000726 kank3 (ENSCVAG00000010731) Poeciliinae ANCESTRAL SPECIES 7 ENSGT00940000160899 ENSGT01040000240503.A.a.b ENSGT00390000002390.a ENSGT00390000006565.b ENSGT00390000018061 ENSGT00940000156757 ENSGT00940000158174.a ENSGT00940000159478.f ENSGT00940000154457.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000163581.f.a.d.a.b Poecilia ANCESTRAL SPECIES 1 ENSGT00940000159007 ENSGT00940000160899 ENSGT01040000240503.A.a.b ENSGT00390000002390.a ENSGT00390000006565.b ENSGT00390000018061 ENSGT00940000156757 ENSGT00940000158174.a ENSGT00940000159478.f ENSGT00940000154457.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000163581.f.a.d.a.b Guppy MODERN SPECIES 456 pex11g (ENSPREG00000010839) MED26 (ENSPREG00000010880) slc35e1 (ENSPREG00000010887) ARID3A (ENSPREG00000010913) ENSPREG00000010972 ndufs7 (ENSPREG00000011008) gamt (ENSPREG00000011023) dazap1 (ENSPREG00000011049) dpp9 (ENSPREG00000011073) ANGPTL4 (ENSPREG00000011092) ENSPREG00000011106 ENSPREG00000011116 ENSPREG00000011120 arrdc2 (ENSPREG00000011165) ENSPREG00000011175 uba52 (ENSPREG00000011185) #22 homer3b (ENSPREG00000011192) #33 ddx49 (ENSPREG00000011214) #32 upf1 (ENSPREG00000011247) #30 PGPEP1 (ENSPREG00000011279) #14 lsm4 (ENSPREG00000011290) #13 ENSPREG00000011317 JUND (ENSPREG00000011387) #12 RAB3A (ENSPREG00000011395) ##8 mpv17l2 (ENSPREG00000011417) #7 ENSPREG00000011422 ENSPREG00000011477 ENSPREG00000011729 PIK3R2 (ENSPREG00000011739) kank3 (ENSPREG00000011759) ENSPREG00000011776 NAME_6 ANCESTRAL SPECIES 133 ENSGT00390000000427.b ENSGT00390000000427.a ENSGT00390000000259.k.b ENSGT00940000159007 ENSGT00940000160899 ENSGT01040000240503.A.a.b ENSGT00390000002390.a ENSGT00390000006565.b ENSGT00390000018061 ENSGT00940000156757 ENSGT00940000158174.a ENSGT00940000159478.f ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00940000154886.a.a ENSGT00940000154457.b ENSGT00940000163581.f.a.d.a.b Amazon molly MODERN SPECIES 366 APBA3 (ENSPFOG00000002909) pex11g (ENSPFOG00000002905) MED26 (ENSPFOG00000002885) slc35e1 (ENSPFOG00000002826) ARID3A (ENSPFOG00000002717) ENSPFOG00000002684 ENSPFOG00000002674 ndufs7 (ENSPFOG00000002592) gamt (ENSPFOG00000002542) dazap1 (ENSPFOG00000002387) dpp9 (ENSPFOG00000001793) ANGPTL4 (ENSPFOG00000001468) ENSPFOG00000001383 ENSPFOG00000001322 arrdc2 (ENSPFOG00000001217) uba52 (ENSPFOG00000001158) #22 homer3b (ENSPFOG00000001016) #33 ddx49 (ENSPFOG00000000870) #32 upf1 (ENSPFOG00000000673) #30 PGPEP1 (ENSPFOG00000000589) #14 lsm4 (ENSPFOG00000000570) #13 RNF213 (ENSPFOG00000000373) JUND (ENSPFOG00000020956) #12 RAB3A (ENSPFOG00000000350) ##8 mpv17l2 (ENSPFOG00000000341) #7 ENSPFOG00000000235 ENSPFOG00000024762 ENSPFOG00000000170 ENSPFOG00000000158 ENSPFOG00000024225 ENSPFOG00000023056 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.e.a #22 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620.s #7 ENSGT00940000160620.t.a #7 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a Siamese fighting fish MODERN SPECIES 15 crb1 (ENSBSLG00000025816) axdnd1 (ENSBSLG00000025823) nphs2 (ENSBSLG00000025825) ENSBSLG00000025827 ENSBSLG00000025830 fam163ab (ENSBSLG00000025831) RABGAP1L (ENSBSLG00000025839) ENSBSLG00000025879 ENSBSLG00000025880 ENSBSLG00000025881 ENSBSLG00000025882 ENSBSLG00000025883 ENSBSLG00000000537 arrdc2 (ENSBSLG00000000561) ENSBSLG00000000587 uba52 (ENSBSLG00000000611) #22 homer3b (ENSBSLG00000000633) #33 ddx49 (ENSBSLG00000000670) #32 upf1 (ENSBSLG00000000707) #30 PGPEP1 (ENSBSLG00000000775) #14 ENSBSLG00000000782 ENSBSLG00000000789 GHRHR (ENSBSLG00000000793) FYCO1 (ENSBSLG00000000814) ENSBSLG00000000842 ENSBSLG00000000850 ENSBSLG00000000856 olfml2ba (ENSBSLG00000001207) atf6 (ENSBSLG00000001241) ENSBSLG00000001483 lmx1a (ENSBSLG00000002170) Carangaria ANCESTRAL SPECIES 7 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Pleuronectoidei ANCESTRAL SPECIES 20 ENSGT00390000007029.e.a ENSGT00390000007336.a.a ENSGT00940000167793 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000158174.a Turbot MODERN SPECIES 3 ANO8 (ENSSMAG00000020948) DDA1 (ENSSMAG00000020979) ABHD8 (ENSSMAG00000020980) ENSSMAG00000020982 nek7 (ENSSMAG00000020990) lhx9 (ENSSMAG00000036558) si:dkey-121a9.3 (ENSSMAG00000035114) DENND1B (ENSSMAG00000020995) crb1 (ENSSMAG00000020997) ENSSMAG00000020998 ENSSMAG00000020999 FAM163A (ENSSMAG00000030002) ENSSMAG00000021001 ENSSMAG00000021010 ENSSMAG00000021012 ENSSMAG00000021014 #22 ENSSMAG00000021015 #33 ddx49 (ENSSMAG00000021016) #32 ENSSMAG00000021018 #30 PGPEP1 (ENSSMAG00000028380) #14 lsm4 (ENSSMAG00000037170) #13 JUND (ENSSMAG00000021021) #12 ENSSMAG00000021022 ##8 ENSSMAG00000021023 #7 ENSSMAG00000021024 ENSSMAG00000021030 ENSSMAG00000021031 ENSSMAG00000021032 ENSSMAG00000021034 ENSSMAG00000021035 ENSSMAG00000021036 Tongue sole MODERN SPECIES 11 ENSCSEG00000016522 nek7 (ENSCSEG00000016513) lhx9 (ENSCSEG00000016509) si:dkey-121a9.3 (ENSCSEG00000016506) DENND1B (ENSCSEG00000016465) crb1 (ENSCSEG00000016420) axdnd1 (ENSCSEG00000016400) nphs2 (ENSCSEG00000016392) ENSCSEG00000016358 fam163ab (ENSCSEG00000016348) ENSCSEG00000016319 ENSCSEG00000016297 RABGAP1L (ENSCSEG00000016222) arrdc2 (ENSCSEG00000016199) homer3b (ENSCSEG00000016190) #33 uba52 (ENSCSEG00000016184) #22 PGPEP1 (ENSCSEG00000016180) #14 upf1 (ENSCSEG00000016159) #30 ddx49 (ENSCSEG00000016139) #32 lsm4 (ENSCSEG00000016127) #13 JUND (ENSCSEG00000016119) #12 RAB3A (ENSCSEG00000016102) ##8 mpv17l2 (ENSCSEG00000016094) #7 ENSCSEG00000016022 ENSCSEG00000016009 ENSCSEG00000015978 kank3 (ENSCSEG00000015957) PTPRS (ENSCSEG00000015874) tbxa2r (ENSCSEG00000015857) gipc3 (ENSCSEG00000015838) ENSCSEG00000015828 Carangaria_A ANCESTRAL SPECIES 3 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Seriola ANCESTRAL SPECIES ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f Greater amberjack MODERN SPECIES DENND1B (ENSSDUG00000010240) ENSSDUG00000010224 crb1 (ENSSDUG00000010170) axdnd1 (ENSSDUG00000010123) nphs2 (ENSSDUG00000010106) ENSSDUG00000010066 fam163ab (ENSSDUG00000010052) ENSSDUG00000010041 RABGAP1L (ENSSDUG00000009910) ENSSDUG00000009870 ENSSDUG00000009840 ENSSDUG00000009821 arrdc2 (ENSSDUG00000009801) ENSSDUG00000009792 ENSSDUG00000009780 uba52 (ENSSDUG00000009763) #22 homer3b (ENSSDUG00000009743) #33 ddx49 (ENSSDUG00000009696) #32 upf1 (ENSSDUG00000009629) #30 PGPEP1 (ENSSDUG00000009602) #14 lsm4 (ENSSDUG00000009588) #13 ENSSDUG00000009495 JUND (ENSSDUG00000009479) #12 RAB3A (ENSSDUG00000009466) ##8 mpv17l2 (ENSSDUG00000009459) #7 ENSSDUG00000008901 ENSSDUG00000008830 PIK3R2 (ENSSDUG00000008807) ENSSDUG00000008756 kank3 (ENSSDUG00000008728) ENSSDUG00000008717 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 406 uba52 (ENSLCAG00010014627) #22 ENSLCAG00010014640 homer3b (ENSLCAG00010014642) #33 ddx49 (ENSLCAG00010014652) #32 PGPEP1 (ENSLCAG00010014673) #14 lsm4 (ENSLCAG00010014683) #13 RNF213 (ENSLCAG00010014694) JUND (ENSLCAG00010014697) #12 RAB3A (ENSLCAG00010014702) ##8 mpv17l2 (ENSLCAG00010014707) #7 ENSLCAG00010014750 ENSLCAG00010014811 PIK3R2 (ENSLCAG00010014820) ENSLCAG00010014829 ENSLCAG00010014842 ENSLCAG00010014856 Barramundi perch MODERN SPECIES 1500 ENSLCAG00010021684 #22 Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593.e.a #22 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00740000117196 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00390000007336.a.a.a ENSGT00940000167793 ENSGT00940000156725.f ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.ad.b ENSGT00940000163422 ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620.q #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a ENSGT00940000159478.f ENSGT00940000156757 Fugu MODERN SPECIES 12 DENND1B (ENSTRUG00000001085) crb1 (ENSTRUG00000001194) axdnd1 (ENSTRUG00000001309) nphs2 (ENSTRUG00000029851) ENSTRUG00000001601 fam163ab (ENSTRUG00000031625) ENSTRUG00000002247 ENSTRUG00000027225 RABGAP1L (ENSTRUG00000001690) ENSTRUG00000031590 ENSTRUG00000003706 ENSTRUG00000027473 ENSTRUG00000030050 ENSTRUG00000025944 arrdc2 (ENSTRUG00000003734) uba52 (ENSTRUG00000004142) #22 homer3b (ENSTRUG00000025814) #33 ddx49 (ENSTRUG00000021524) #32 upf1 (ENSTRUG00000005131) #30 PGPEP1 (ENSTRUG00000005768) #14 lsm4 (ENSTRUG00000021737) #13 JUND (ENSTRUG00000005979) #12 RAB3A (ENSTRUG00000026699) ##8 mpv17l2 (ENSTRUG00000006130) #7 mpv17l2 (ENSTRUG00000006276) #7 ENSTRUG00000030819 ENSTRUG00000022546 ENSTRUG00000006287 ENSTRUG00000023627 PIK3R2 (ENSTRUG00000026321) ENSTRUG00000027278 Tetraodon MODERN SPECIES ENSTNIG00000010172 nphs2 (ENSTNIG00000000865) axdnd1 (ENSTNIG00000010173) crb1 (ENSTNIG00000010174) ENSTNIG00000010175 DENND1B (ENSTNIG00000010176) lhx9 (ENSTNIG00000010177) nek7 (ENSTNIG00000010178) gtpbp3 (ENSTNIG00000010179) plvapb (ENSTNIG00000010180) babam1 (ENSTNIG00000010181) nr2f6b (ENSTNIG00000010182) ENSTNIG00000010183 ENSTNIG00000010184 arrdc2 (ENSTNIG00000010185) uba52 (ENSTNIG00000010186) #22 homer3b (ENSTNIG00000010187) #33 ddx49 (ENSTNIG00000010188) #32 upf1 (ENSTNIG00000010189) #30 PGPEP1 (ENSTNIG00000010190) #14 lsm4 (ENSTNIG00000010191) #13 JUND (ENSTNIG00000010192) #12 RAB3A (ENSTNIG00000010193) ##8 mpv17l2 (ENSTNIG00000010194) #7 ENSTNIG00000010195 ENSTNIG00000010196 PIK3R2 (ENSTNIG00000010197) ENSTNIG00000010198 kank3 (ENSTNIG00000010199) ANGPTL4 (ENSTNIG00000010200) dazap1 (ENSTNIG00000010201) Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000177302 ENSGT01010000223141 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00390000016548 ENSGT00940000155446 ENSGT01060000249981.A ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000153593.e.a #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620 #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620.k #7 ENSGT00940000160620.l #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a ENSGT00940000165866 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.f #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413.g #30 ENSGT00390000015368.a.a.d #14 ENSGT00610000086173 #13 ENSGT00630000089884.B ENSGT00940000162806.b.b #12 ENSGT00940000158959.a.a ##8 ENSGT00940000160620.k #7 ENSGT00940000160620.l #7 ENSGT00940000164492.a.b ENSGT00940000164804.b ENSGT00940000157050.i.b ENSGT00390000013481.c.b.b.c ENSGT00940000154886.a.a European seabass MODERN SPECIES 17 lhx9 (ENSDLAG00005017025) si:dkey-121a9.3 (ENSDLAG00005028306) DENND1B (ENSDLAG00005027788) crb1 (ENSDLAG00005017337) axdnd1 (ENSDLAG00005017379) nphs2 (ENSDLAG00005017394) ENSDLAG00005017411 fam163ab (ENSDLAG00005028421) ENSDLAG00005017527 ENSDLAG00005019743 ENSDLAG00005019750 ENSDLAG00005028927 ENSDLAG00005019782 arrdc2 (ENSDLAG00005033076) ENSDLAG00005019807 ENSDLAG00005019812 #22 homer3b (ENSDLAG00005019841) #33 ddx49 (ENSDLAG00005019883) #32 ENSDLAG00005019938 #30 PGPEP1 (ENSDLAG00005020538) #14 lsm4 (ENSDLAG00005031255) #13 ENSDLAG00005020558 JUND (ENSDLAG00005033861) #12 ENSDLAG00005026617 ##8 ENSDLAG00005032197 #7 ENSDLAG00005027597 #7 ENSDLAG00005020806 ENSDLAG00005021026 ENSDLAG00005021042 ENSDLAG00005031850 ENSDLAG00005023362 Perciformes ANCESTRAL SPECIES 5 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.f #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d.b ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Cottioidei ANCESTRAL SPECIES 15 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.f #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d.b ENSGT00940000161872 #15 ENSGT00770000121812 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 Lumpfish MODERN SPECIES 8 pcyt1aa (ENSCLMG00005007903) ap2m1a (ENSCLMG00005007959) dvl3a (ENSCLMG00005007983) copb2 (ENSCLMG00005008047) rbp2b (ENSCLMG00005009140) rbp1.1 (ENSCLMG00005009141) NMNAT3 (ENSCLMG00005009145) clstn2a (ENSCLMG00005009148) spsb4a (ENSCLMG00005009153) slc25a36a (ENSCLMG00005009154) MARCHF2 (ENSCLMG00005009155) rab11bb (ENSCLMG00005009159) TIMM44 (ENSCLMG00005009244) CTXN1 (ENSCLMG00005009257) CERS4 (ENSCLMG00005009260) uba52 (ENSCLMG00005009262) #22 ENSCLMG00005009265 #33 ENSCLMG00005009267 #33 upf1 (ENSCLMG00005009276) #30 pgpep1 (ENSCLMG00005009453) #14 jund (ENSCLMG00005009472) #12 RAB3A (ENSCLMG00005009473) ##8 ENSCLMG00005009477 ifi30 (ENSCLMG00005009629) pik3r2 (ENSCLMG00005009644) MAST3 (ENSCLMG00005011111) ENSCLMG00005011114 #15 crtc1a (ENSCLMG00005011115) ##28 MED26 (ENSCLMG00005011116) ENSCLMG00005011118 rps15 (ENSCLMG00005011291) Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b ENSGT00940000159675 ENSGT00950000183179.b.b ENSGT00950000183086.a.a.b.h.b ENSGT01030000234629.C.a ENSGT00940000154369.g.a ENSGT00940000158995.b ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.f #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413.h #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000158959.a.b ##8 ENSGT00940000164492.a.a ENSGT00940000164804.a ENSGT00940000157050.i.a ENSGT00940000157166.d.b ENSGT00940000161872 #15 ENSGT00390000010652.D.a.b ##28 ENSGT00390000000259.k.a ENSGT00940000154539.a.b ENSGT00390000000475 ENSGT00940000158174.b Channel bull blenny MODERN SPECIES 8 pcyt1aa (ENSCGOG00000012307) ap2m1a (ENSCGOG00000012546) dvl3a (ENSCGOG00000012594) copb2 (ENSCGOG00000013176) rbp2b (ENSCGOG00000014126) rbp1.1 (ENSCGOG00000014153) NMNAT3 (ENSCGOG00000014162) clstn2a (ENSCGOG00000014188) spsb4a (ENSCGOG00000014851) slc25a36a (ENSCGOG00000014854) MARCHF2 (ENSCGOG00000014860) rab11bb (ENSCGOG00000014861) TIMM44 (ENSCGOG00000014872) CTXN1 (ENSCGOG00000015256) ENSCGOG00000015260 uba52 (ENSCGOG00000015279) #22 HOMER3 (ENSCGOG00000015280) #33 upf1 (ENSCGOG00000015291) #30 pgpep1 (ENSCGOG00000015544) #14 RAB3A (ENSCGOG00000015547) ##8 jund (ENSCGOG00000015574) #12 ENSCGOG00000015645 ifi30 (ENSCGOG00000017696) pik3r2 (ENSCGOG00000017734) ENSCGOG00000018385 ENSCGOG00000018388 #15 crtc1a (ENSCGOG00000018393) ##28 MED26 (ENSCGOG00000018398) ENSCGOG00000018400 rps15 (ENSCGOG00000018403) DPP9 (ENSCGOG00000018463) Otomorpha ANCESTRAL SPECIES 187 ENSGT00940000160040.B.b ENSGT00530000064649 ENSGT01050000244924.a.a.b.a.a ENSGT00940000175337 ENSGT00940000154739.B ENSGT00940000160580.a ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00400000024256 ENSGT01030000236342 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593 #22 ENSGT00940000158081.o.a #33 ENSGT01030000235156 ENSGT00940000157166.c Clupeiformes ANCESTRAL SPECIES 106 ENSGT00940000160040.B.b ENSGT00530000064649 ENSGT01050000244924.a.a.b.a.a ENSGT00950000183096.a.b ENSGT00990000204538 ENSGT00940000160580.a ENSGT00940000160580.b.f ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00400000024256 ENSGT00940000159994 ENSGT00940000177177 ENSGT00940000153593 #22 ENSGT00940000158081.o.a #33 ENSGT01030000235156 ENSGT00940000157166.c ENSGT00940000157050.i.b ENSGT00940000164804.b ENSGT00390000010922 ENSGT00510000049371 ENSGT00390000007658 ENSGT00530000063790.a.a ENSGT00940000156634.a ENSGT00550000075004 ENSGT01050000244814.a.a.b.b.b.a.b ENSGT00940000165115.a ENSGT00390000003420.b ENSGT01030000234559.a.a.a Denticle herring MODERN SPECIES 4 fam174c (ENSDCDG00000034896) ptbp1b (ENSDCDG00000034474) ENSDCDG00000034441 ENSDCDG00000034440 PALM (ENSDCDG00000034439) PLPPR3 (ENSDCDG00000034437) med16 (ENSDCDG00000034382) TMEM259 (ENSDCDG00000034283) GRIN3B (ENSDCDG00000034265) wdr18 (ENSDCDG00000034261) ENSDCDG00000034257 ENSDCDG00000034254 ENSDCDG00000034252 arrdc2 (ENSDCDG00000034249) ENSDCDG00000034247 uba52 (ENSDCDG00000034243) #22 homer3b (ENSDCDG00000034242) #33 ENSDCDG00000034236 MAST3 (ENSDCDG00000034052) PIK3R2 (ENSDCDG00000033897) ENSDCDG00000033840 pars2 (ENSDCDG00000033835) ttc4 (ENSDCDG00000033834) plaat1 (ENSDCDG00000033833) ftsj3 (ENSDCDG00000033832) ENSDCDG00000033830 ENSDCDG00000033829 PIK3R2 (ENSDCDG00000033675) ENSDCDG00000033624 pars2 (ENSDCDG00000033607) TTC22 (ENSDCDG00000033605) Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES ENSGT00940000153593.g #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000153593.g #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000153593.g #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000153593.g #22 Golden-line barbel MODERN SPECIES 215 ENSSGRG00000043912 ENSSGRG00000043880 ENSSGRG00000043878 eef2b (ENSSGRG00000042990) ARMC6 (ENSSGRG00000042967) #35 slc25a42 (ENSSGRG00000042966) #36 ENSSGRG00000042965 tm6sf2a (ENSSGRG00000042962) sbno2a (ENSSGRG00000042888) ARHGAP45 (ENSSGRG00000042886) POLR2E (ENSSGRG00000042825) gpx4b (ENSSGRG00000042824) ENSSGRG00000042100 ENSSGRG00000042092 ENSSGRG00000042091 uba52 (ENSSGRG00000042090) #22 ENSSGRG00000042060 #33 upf1 (ENSSGRG00000041785) #30 pgpep1 (ENSSGRG00000041779) #14 jund (ENSSGRG00000041777) #12 loxl5b (ENSSGRG00000041775) nmrk2 (ENSSGRG00000041715) ENSSGRG00000041711 ATCAY (ENSSGRG00000041709) cplx4c (ENSSGRG00000041707) ENSSGRG00000040310 ENSSGRG00000040301 klf2b (ENSSGRG00000040298) AP1M1 (ENSSGRG00000040228) LPL (ENSSGRG00000039985) ENSSGRG00000039983 Otophysi DUPLICATION Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES 52 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946.g ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g Cyprinoidei ANCESTRAL SPECIES 17 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000158081.o.a.f #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924.f ENSGT00940000157178.g ENSGT01030000234542.b.b.a.a.a.b.wb.b ENSGT00940000157246.a ENSGT00940000160466 Cyprininae ANCESTRAL SPECIES ENSGT00940000153593.h.a.a #22 Goldfish DUPLICATION Goldfish MODERN SPECIES 19 ENSCARG00000011400 CTXN1 (ENSCARG00000011388) rab11bb (ENSCARG00000011327) ENSCARG00000011245 gpx4b (ENSCARG00000011225) ARHGAP45 (ENSCARG00000011156) sbno2a (ENSCARG00000010535) tm6sf2a (ENSCARG00000010494) ENSCARG00000010468 ENSCARG00000010458 slc25a42 (ENSCARG00000010448) #36 ARMC6 (ENSCARG00000010432) #35 ENSCARG00000010425 eef2b (ENSCARG00000010095) BTBD2 (ENSCARG00000010021) UBA52 (ENSCARG00000010005) #22 HOMER3 (ENSCARG00000009993) #33 upf1 (ENSCARG00000009967) #30 pgpep1 (ENSCARG00000009948) #14 jund (ENSCARG00000009940) #12 ENSCARG00000009932 CTXN1 (ENSCARG00000009924) rab11bb (ENSCARG00000009876) ENSCARG00000009536 ENSCARG00000009474 gpx4b (ENSCARG00000009457) BTBD2 (ENSCARG00000009449) UNC13A (ENSCARG00000008314) MEX3D (ENSCARG00000008158) mbd3a (ENSCARG00000008142) UQCR11 (ENSCARG00000008133) Goldfish MODERN SPECIES 11 ENSCARG00000003312 ENSCARG00000003306 ISYNA1 (ENSCARG00000003281) #18 plekhj1 (ENSCARG00000003264) sf3a2 (ENSCARG00000003259) ENSCARG00000003257 ONECUT3 (ENSCARG00000003254) pias4b (ENSCARG00000003249) tcf3a (ENSCARG00000003229) UQCR11 (ENSCARG00000003217) ENSCARG00000003211 MEX3D (ENSCARG00000003200) ENSCARG00000001476 BTBD2 (ENSCARG00000001324) ENSCARG00000001319 UBA52 (ENSCARG00000001315) #22 ENSCARG00000001299 #33 upf1 (ENSCARG00000001254) #30 pgpep1 (ENSCARG00000001246) #14 jund (ENSCARG00000001240) #12 loxl5b (ENSCARG00000001231) nmrk2 (ENSCARG00000001230) ATCAY (ENSCARG00000001223) cplx4c (ENSCARG00000001220) rx2 (ENSCARG00000001217) ENSCARG00000001214 CTXN1 (ENSCARG00000001212) rab11bb (ENSCARG00000001208) ENSCARG00000001128 gpx4b (ENSCARG00000001104) POLR2E (ENSCARG00000001077) Characiphysae ANCESTRAL SPECIES 34 ENSGT00390000002913 #35 ENSGT00940000158163.a #36 ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00940000159946.h ENSGT00950000183110.b.a.d ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g Characiphysae_b ANCESTRAL SPECIES 57 ENSGT00390000002913 #35 ENSGT00940000158163.a #36 ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00940000159946.h ENSGT00950000183110.b.a.d ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g Characoidei ANCESTRAL SPECIES 45 ENSGT00940000154662.d ENSGT00390000002913 #35 ENSGT00940000158163.a #36 ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00940000159946.h ENSGT00950000183110.b.a.d ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.b.b #22 ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 ENSGT00940000157178.g Mexicana tetra MODERN SPECIES 8 BTBD2 (ENSAMXG00000006626) eef2b (ENSAMXG00000006645) ARMC6 (ENSAMXG00000006664) #35 slc25a42 (ENSAMXG00000006680) #36 ENSAMXG00000038802 tm6sf2a (ENSAMXG00000040821) sbno2a (ENSAMXG00000018868) ARHGAP45 (ENSAMXG00000018912) POLR2E (ENSAMXG00000018915) gpx4b (ENSAMXG00000041988) PIP5K1C (ENSAMXG00000041140) rab11bb (ENSAMXG00000042655) TIMM44 (ENSAMXG00000018942) CTXN1 (ENSAMXG00000026132) ENSAMXG00000018965 UBA52 (ENSAMXG00000037850) #22 ENSAMXG00000018993 #33 upf1 (ENSAMXG00000042187) #30 pgpep1 (ENSAMXG00000038090) #14 jund (ENSAMXG00000026133) #12 loxl5b (ENSAMXG00000019021) nmrk2 (ENSAMXG00000034655) cplx4c (ENSAMXG00000041674) rx2 (ENSAMXG00000041205) ENSAMXG00000015116 ENSAMXG00000039725 klf2b (ENSAMXG00000038341) ap1m1 (ENSAMXG00000040077) ENSAMXG00000040121 ENSAMXG00000038945 ENSAMXG00000025975 Otophysi ANCESTRAL SPECIES 30 ENSGT01050000244924.a.a.b.a.a ENSGT00940000154739.B ENSGT00940000160580.a ENSGT00940000160280.c ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00400000024256 ENSGT00940000161753 ENSGT01030000236342 ENSGT00980000198913 ENSGT00940000159994 ENSGT00940000177177 ENSGT00510000053055 ENSGT00940000153593.h.a.b #22 ENSGT00940000158081.o.a #33 ENSGT01030000235156 ENSGT00940000157166.c ENSGT00940000157564 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00390000008086.b ENSGT00940000154587.a.a ENSGT01050000244898.a.a.b ENSGT01050000244838.H.d.d ENSGT00940000154290.a.f ENSGT00940000166653 ENSGT00940000154296.a ENSGT01030000234559.a.b ENSGT00940000159329 Cyprinoidei ANCESTRAL SPECIES 17 ENSGT00940000160753 ENSGT00390000017748 ENSGT00940000158649.a.a ENSGT00940000160926 ENSGT00390000012913.a.b ENSGT00940000159946.g ENSGT00940000160036 ENSGT00950000183110.b.a.c ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000158081.o.a.f #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a Cyprininae ANCESTRAL SPECIES 324 ENSGT00940000158163.a.a #36 ENSGT00940000158649.a.b.a.b ENSGT00390000012913.a.a.d ENSGT00940000159946.h.b ENSGT00950000183110.b.a.d ENSGT00390000013841.ib ENSGT00940000161913.d.a.a ENSGT00940000159258.c.a ENSGT00940000163126.a.a.a.b ENSGT00940000154412.C.c.a.b ENSGT00940000161913.d.a.b ENSGT00940000159258.c.b ENSGT00940000163126.a.a.a.a ENSGT00940000154412.C.c.a.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000153593.h.b.b #22 ENSGT00940000158081.o.b.b #33 ENSGT00940000157413.i #30 ENSGT00390000015368.a.a.c.b #14 ENSGT00940000162806.b.a #12 ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b Goldfish MODERN SPECIES 19 BTBD2 (ENSCARG00000010021) eef2b (ENSCARG00000010095) ENSCARG00000010425 ARMC6 (ENSCARG00000010432) #35 slc25a42 (ENSCARG00000010448) #36 ENSCARG00000010458 ENSCARG00000010468 tm6sf2a (ENSCARG00000010494) sbno2a (ENSCARG00000010535) ARHGAP45 (ENSCARG00000011156) gpx4b (ENSCARG00000011225) ENSCARG00000011245 rab11bb (ENSCARG00000011327) CTXN1 (ENSCARG00000011388) ENSCARG00000011400 uba52 (ENSCARG00000011408) #22 HOMER3 (ENSCARG00000011431) #33 upf1 (ENSCARG00000011474) #30 pgpep1 (ENSCARG00000011489) #14 jund (ENSCARG00000011501) #12 loxl5b (ENSCARG00000011513) ENSCARG00000011526 nmrk2 (ENSCARG00000011532) ATCAY (ENSCARG00000020674) rx2 (ENSCARG00000020728) ENSCARG00000020750 ENSCARG00000021214 klf2b (ENSCARG00000021223) ap1m1 (ENSCARG00000021242) LPL (ENSCARG00000021713) TPM4 (ENSCARG00000021759) Zebrafish MODERN SPECIES 11 mbd3a (ENSDARG00000061774) BTBD2 (ENSDARG00000104653) eef2b (ENSDARG00000100371) ARMC6 (ENSDARG00000103770) #35 slc25a42 (ENSDARG00000099368) #36 ENSDARG00000115552 tm6sf2a (ENSDARG00000105208) sbno2a (ENSDARG00000098801) ARHGAP45 (ENSDARG00000052496) POLR2E (ENSDARG00000074274) gpx4b (ENSDARG00000076836) PIP5K1C (ENSDARG00000100313) rab11bb (ENSDARG00000090086) ctxn1 (ENSDARG00000113270) ENSDARG00000018619 uba52 (ENSDARG00000041435) #22 ENSDARG00000102532 #33 upf1 (ENSDARG00000016302) #30 pgpep1 (ENSDARG00000054666) #14 jund (ENSDARG00000067850) #12 ENSDARG00000097617 loxl5b (ENSDARG00000076904) nmrk2 (ENSDARG00000067848) ENSDARG00000112703 ATCAY (ENSDARG00000059781) cplx4c (ENSDARG00000094889) rx2 (ENSDARG00000040321) calr3b (ENSDARG00000102808) ENSDARG00000100700 klf2b (ENSDARG00000040432) ap1m1 (ENSDARG00000096249) Characiphysae ANCESTRAL SPECIES 34 ENSGT00940000154662.d ENSGT00390000002913 #35 ENSGT00940000158163.a #36 ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00940000159946.h ENSGT00950000183110.b.a.d ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 Characiphysae_b ANCESTRAL SPECIES 57 ENSGT00940000154662.d ENSGT00390000002913 #35 ENSGT00940000158163.a #36 ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00940000159946.h ENSGT00950000183110.b.a.d ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000170739 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 Electric eel MODERN SPECIES 471 ENSEEEG00000022908 tm6sf2a (ENSEEEG00000022912) sbno2a (ENSEEEG00000022924) ARHGAP45 (ENSEEEG00000022933) POLR2E (ENSEEEG00000022939) gpx4b (ENSEEEG00000022942) ENSEEEG00000022944 PIP5K1C (ENSEEEG00000022945) rab11bb (ENSEEEG00000022947) TIMM44 (ENSEEEG00000022954) CTXN1 (ENSEEEG00000022955) ENSEEEG00000022960 uba52 (ENSEEEG00000022967) #22 HOMER3 (ENSEEEG00000022969) #33 upf1 (ENSEEEG00000000063) #30 pgpep1 (ENSEEEG00000000084) #14 jund (ENSEEEG00000000093) #12 loxl5b (ENSEEEG00000000155) nmrk2 (ENSEEEG00000000205) ATCAY (ENSEEEG00000000232) cplx4c (ENSEEEG00000000270) rx2 (ENSEEEG00000000298) ENSEEEG00000000320 ENSEEEG00000000338 Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES ENSGT00940000153593.h.b.a #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000153593.h.b.a #22 Cyprininae ANCESTRAL SPECIES 1065 ENSGT00940000153593.h.b.a #22 ENSGT00940000158081.o.b.a #33 ENSGT00940000157413.j #30 ENSGT00390000015368.a.a.c.a #14 Cyprininae_a ANCESTRAL SPECIES 59 ENSGT00940000162613.f ENSGT00940000161905.b.b ENSGT00940000159179.g.b ENSGT00940000154662.d.u ENSGT00390000002913 #35 ENSGT00940000158163.a.b #36 ENSGT00940000158649.a.b.a.a ENSGT00390000012913.a.a.c ENSGT00940000159946.h.a ENSGT00950000183110.b.a.d.b ENSGT00940000161913.d.a.b ENSGT00940000159258.c.b ENSGT00940000163126.a.a.a.a ENSGT00940000154412.C.c.a.a ENSGT01030000234515.a.b.b.b.a ENSGT00940000153593.h.b.a #22 ENSGT00940000158081.o.b.a #33 ENSGT00940000157413.j #30 ENSGT00390000015368.a.a.c.a #14 ENSGT00940000154779.a.a.c.b ENSGT00940000165007.a.a ENSGT00940000158364.a.b ENSGT00940000163917.a.b.b ENSGT00950000182915.b.b.a.b.c.b.a ENSGT00940000155438.a.q ENSGT00940000164495.c.a.a ENSGT00940000155363.w ENSGT00940000160466.b ENSGT00940000165063.g ENSGT00390000005847.a ENSGT01000000214896.A Common carp reference MODERN SPECIES 29 eef2b (ENSCCRG00000064570) MEX3D (ENSCCRG00000055684) ENSCCRG00000070880 ENSCCRG00000014462 ENSCCRG00000035161 #35 slc25a42 (ENSCCRG00000082753) #36 ENSCCRG00000001521 tm6sf2a (ENSCCRG00000061917) sbno2a (ENSCCRG00000078397) ENSCCRG00000022982 gpx4b (ENSCCRG00000058980) ENSCCRG00000037725 rab11bb (ENSCCRG00000003636) ENSCCRG00000071775 ENSCCRG00000067269 uba52 (ENSCCRG00000007704) #22 ENSCCRG00000007775 #33 upf1 (ENSCCRG00000007785) #30 pgpep1 (ENSCCRG00000007790) #14 loxl5b (ENSCCRG00000074189) nmrk2 (ENSCCRG00000051935) ENSCCRG00000051906 rx2 (ENSCCRG00000007794) ENSCCRG00000076172 ENSCCRG00000053619 klf2b (ENSCCRG00000006413) ENSCCRG00000049877 ENSCCRG00000007837 ENSCCRG00000076191 ENSCCRG00000052584 admp (ENSCCRG00000030620) Characiphysae ANCESTRAL SPECIES ENSGT00940000153593.h.b.a #22 Channel catfish MODERN SPECIES 12 MEX3D (ENSIPUG00000019444) UNC13A (ENSIPUG00000019460) btbd2 (ENSIPUG00000019506) Armc6 (ENSIPUG00000019528) #35 slc25a42 (ENSIPUG00000019552) #36 Ncan (ENSIPUG00000019592) tm6sf2 (ENSIPUG00000019656) sbno2 (ENSIPUG00000019672) ARHGAP45 (ENSIPUG00000019753) polr2ea (ENSIPUG00000019801) gpx4b (ENSIPUG00000019856) PIP5K1C (ENSIPUG00000019881) rab11bb (ENSIPUG00000019927) ENSIPUG00000019970 HOMER3 (ENSIPUG00000005017) #33 uba52 (ENSIPUG00000005058) #22 UPF1 (ENSIPUG00000005108) #30 Pgpep1 (ENSIPUG00000005216) #14 jund (ENSIPUG00000005241) #12 Lox (ENSIPUG00000005255) nmrk2 (ENSIPUG00000005267) ATCAY (ENSIPUG00000005280) cplx4c (ENSIPUG00000005311) rx2 (ENSIPUG00000005326) CALR (ENSIPUG00000005374) ENSIPUG00000005411 ENSIPUG00000005421 ENSIPUG00000006478 Klf2 (ENSIPUG00000006554) AP1M1 (ENSIPUG00000006581) LPL (ENSIPUG00000006646) Otophysi ANCESTRAL SPECIES ENSGT00940000153593.h.b.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000153593.h.b.b #22 Cyprininae ANCESTRAL SPECIES 324 ENSGT00940000158649.a.b.a.b ENSGT00390000012913.a.a.d ENSGT00940000159946.h.b ENSGT00950000183110.b.a.d ENSGT00390000013841.ib ENSGT00940000161913.d.a.a ENSGT00940000159258.c.a ENSGT00940000163126.a.a.a.b ENSGT00940000154412.C.c.a.b ENSGT00940000161913.d.a.b ENSGT00940000159258.c.b ENSGT00940000163126.a.a.a.a ENSGT00940000154412.C.c.a.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.a.b #22 ENSGT00940000153593.h.b.b #22 ENSGT00940000158081.o.b.b #33 ENSGT00940000157413.i #30 ENSGT00390000015368.a.a.c.b #14 ENSGT00940000162806.b.a #12 ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ENSGT00940000157246.a.a Cyprininae_a ANCESTRAL SPECIES 162 ENSGT00940000158163.a.a #36 ENSGT00940000158649.a.b.a.b ENSGT00390000012913.a.a.d ENSGT00940000159946.h.b ENSGT00950000183110.b.a.d.a ENSGT00390000013841.ib ENSGT00940000161913.d.a.a ENSGT00940000159258.c.a ENSGT00940000163126.a.a.a.b ENSGT00940000154412.C.c.a.b ENSGT01030000234515.a.b.b.b.b ENSGT00940000153593.h.b.b #22 ENSGT00940000158081.o.b.b #33 ENSGT00940000157413.i #30 ENSGT00390000015368.a.a.c.b #14 ENSGT00940000162806.b.a #12 ENSGT00940000154779.a.a.c.a ENSGT00940000165007.a.b ENSGT00940000158364.a.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b.a ENSGT00950000182915.b.b.a.b.c.b.b ENSGT00940000155438.a.r ENSGT00940000164495.c.a.b ENSGT00940000157924.f ENSGT01030000234542.b.b.a.a.a.b.wb.b.b ENSGT00940000157178.g Common carp reference MODERN SPECIES 21 ENSCCRG00000039392 ENSCCRG00000035403 eef2b (ENSCCRG00000035228) ENSCCRG00000011585 #35 slc25a42 (ENSCCRG00000080212) #36 ENSCCRG00000065346 tm6sf2a (ENSCCRG00000073164) sbno2a (ENSCCRG00000020152) ARHGAP45 (ENSCCRG00000012460) ENSCCRG00000012408 gpx4b (ENSCCRG00000071825) ENSCCRG00000045930 rab11bb (ENSCCRG00000000721) ENSCCRG00000073664 ENSCCRG00000026536 uba52 (ENSCCRG00000016171) #22 ENSCCRG00000058571 #33 upf1 (ENSCCRG00000051892) #30 pgpep1 (ENSCCRG00000073516) #14 jund (ENSCCRG00000035101) #12 loxl5b (ENSCCRG00000045132) nmrk2 (ENSCCRG00000045258) ENSCCRG00000045180 cplx4c (ENSCCRG00000079094) rx2 (ENSCCRG00000075008) ENSCCRG00000019801 ENSCCRG00000081626 klf2b (ENSCCRG00000011217) ENSCCRG00000016932 ap1m1 (ENSCCRG00000049217) ENSCCRG00000074681 Characiphysae ANCESTRAL SPECIES ENSGT00940000153593.h.b.b #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000153593.h.b.b #22 Characoidei ANCESTRAL SPECIES 45 ENSGT00940000159179.g ENSGT00940000154662.d ENSGT00390000002913 #35 ENSGT00940000158163.a #36 ENSGT00940000158649.a.b ENSGT00390000012913.a.a ENSGT00940000159946.h ENSGT00950000183110.b.a.d ENSGT00390000013841 ENSGT00940000161913 ENSGT00940000159258.c ENSGT00940000163126.a.a ENSGT00390000000051.b ENSGT00940000154412.C.c.a ENSGT01030000234515.a.b.b.b ENSGT00940000153593.h.b.b #22 ENSGT00940000153593.h.a.a #22 ENSGT00940000158081.o.b #33 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00940000162806.b.a #12 ENSGT00940000181505 ENSGT00940000154779.a.a.c ENSGT00940000165007.a ENSGT00940000158364.a ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000163917.a.b ENSGT00950000182915.b.b.a.b.c.b ENSGT00940000155438.a ENSGT00940000164495.c.a ENSGT00940000157924 Red-bellied piranha MODERN SPECIES 48 BTBD2 (ENSPNAG00000027052) eef2b (ENSPNAG00000027010) ARMC6 (ENSPNAG00000006370) #35 slc25a42 (ENSPNAG00000026892) #36 ENSPNAG00000026808 tm6sf2a (ENSPNAG00000026691) sbno2a (ENSPNAG00000026609) ARHGAP45 (ENSPNAG00000026372) POLR2E (ENSPNAG00000026263) gpx4b (ENSPNAG00000026183) PIP5K1C (ENSPNAG00000006737) ENSPNAG00000006431 TIMM44 (ENSPNAG00000026001) CTXN1 (ENSPNAG00000025942) ENSPNAG00000025924 uba52 (ENSPNAG00000025916) #22 HOMER3 (ENSPNAG00000025639) #33 upf1 (ENSPNAG00000025614) #30 pgpep1 (ENSPNAG00000025537) #14 jund (ENSPNAG00000006056) #12 ENSPNAG00000025498 loxl5b (ENSPNAG00000006766) nmrk2 (ENSPNAG00000003921) ATCAY (ENSPNAG00000025397) cplx4c (ENSPNAG00000025384) ENSPNAG00000003912 rx2 (ENSPNAG00000025348) ENSPNAG00000025330 ENSPNAG00000005719 klf2b (ENSPNAG00000025132) ap1m1 (ENSPNAG00000025118) Osteoglossiformes ANCESTRAL SPECIES 2 ENSGT00530000064649 ENSGT01050000244924.a.a.b ENSGT00950000183096.a.b ENSGT00940000154739.B ENSGT00940000160580.a ENSGT00940000160580.b ENSGT00940000160280 ENSGT00390000003821 ENSGT00390000013329 ENSGT00940000161021.a.a ENSGT00390000000289 ENSGT00390000001700.b ENSGT00400000024256 ENSGT01030000236342 ENSGT00940000159994 ENSGT00940000153593 #22 ENSGT00940000158081.o.a #33 ENSGT00730000111231 #32 ENSGT00940000157413 #30 ENSGT00390000015368.a.a.c #14 ENSGT00610000086173 #13 ENSGT00940000162806 #12 ENSGT00940000158959.b.b #8 ENSGT00940000164492 ENSGT00940000164804 ENSGT00940000157050.i.b ENSGT00940000157166.c ENSGT01030000235156 ENSGT00940000161872 #15 ENSGT00940000159238 #27 ENSGT00390000010652.D.a.a ##28 Asian bonytongue MODERN SPECIES 24 fam174c (ENSSFOG00015021747) ptbp1b (ENSSFOG00015021709) ENSSFOG00015021549 ENSSFOG00015021498 palm1b (ENSSFOG00015028027) plppr3a (ENSSFOG00015021450) med16 (ENSSFOG00015021393) TMEM259 (ENSSFOG00015027664) GRIN3B (ENSSFOG00015021342) wdr18 (ENSSFOG00015021304) ENSSFOG00015021278 ENSSFOG00015021269 ENSSFOG00015021249 DAPK3 (ENSSFOG00015021233) arrdc2 (ENSSFOG00015021210) uba52 (ENSSFOG00015021206) #22 homer3b (ENSSFOG00015021174) #33 ddx49 (ENSSFOG00015021150) #32 upf1 (ENSSFOG00015021095) #30 pgpep1 (ENSSFOG00015021073) #14 lsm4 (ENSSFOG00015021067) #13 ENSSFOG00015021062 jund (ENSSFOG00015025244) #12 rab3aa (ENSSFOG00015029019) #8 ENSSFOG00015020990 ifi30 (ENSSFOG00015029486) PIK3R2 (ENSSFOG00015020924) MAST3 (ENSSFOG00015020879) ENSSFOG00015020850 ENSSFOG00015020834 #15 klhl26 (ENSSFOG00015020822) #27 P. kingsleyae MODERN SPECIES 4 plppr3a (ENSPKIG00000005596) med16 (ENSPKIG00000005645) TMEM259 (ENSPKIG00000005713) GRIN3B (ENSPKIG00000005730) wdr18 (ENSPKIG00000005770) ENSPKIG00000005836 ENSPKIG00000005851 ENSPKIG00000005863 ENSPKIG00000005889 arrdc2 (ENSPKIG00000005934) uba52 (ENSPKIG00000005976) #22 homer3b (ENSPKIG00000005994) #33 ddx49 (ENSPKIG00000006013) #32 upf1 (ENSPKIG00000006069) #30 pgpep1 (ENSPKIG00000006118) #14 lsm4 (ENSPKIG00000006154) #13 jund (ENSPKIG00000006193) #12 rab3aa (ENSPKIG00000006212) #8 ENSPKIG00000006292 ifi30 (ENSPKIG00000006449) PIK3R2 (ENSPKIG00000006516) MAST3 (ENSPKIG00000006629) ENSPKIG00000006674 ENSPKIG00000006717 CRTC1 (ENSPKIG00000006807) ##28 comp (ENSPKIG00000006912) Reedfish DUPLICATION Reedfish MODERN SPECIES 16 mettl21a (ENSECRG00000015070) creb1b (ENSECRG00000015035) klf7b (ENSECRG00000015008) zgc:162396 (ENSECRG00000014641) zgc:162396 (ENSECRG00000014558) ube2f (ENSECRG00000014448) ramp1 (ENSECRG00000014413) pofut2 (ENSECRG00000014386) MYO1B (ENSECRG00000014259) ENSECRG00000014140 BARD1 (ENSECRG00000014092) vwc2l (ENSECRG00000009136) IKZF2 (ENSECRG00000009121) erbb4a (ENSECRG00000009097) CPS1 (ENSECRG00000009063) UBA52 (ENSECRG00000009045) #22 itgb5 (ENSECRG00000009021) ENSECRG00000009008 slc12a8 (ENSECRG00000008989) znf148 (ENSECRG00000008976) ENSECRG00000008959 snx4 (ENSECRG00000008942) ENSECRG00000008926 OSBPL11 (ENSECRG00000008894) gpd1c (ENSECRG00000008861) LMLN (ENSECRG00000008805) ENSECRG00000008763 LYPD1 (ENSECRG00000008751) ENSECRG00000008745 gpr39 (ENSECRG00000008737) SLC35F5 (ENSECRG00000008709) Reedfish MODERN SPECIES 3 ENSECRG00000011419 ENSECRG00000011429 ENSECRG00000011446 ENSECRG00000011477 ENSECRG00000011498 ENSECRG00000011507 ENSECRG00000011513 ENSECRG00000011609 slc35e1 (ENSECRG00000011770) MED26 (ENSECRG00000011783) smim7 (ENSECRG00000011800) tmem38a (ENSECRG00000011810) ENSECRG00000011823 NWD1 (ENSECRG00000011849) sin3b (ENSECRG00000011881) uba52 (ENSECRG00000011904) #22 homer3b (ENSECRG00000011925) #33 ddx49 (ENSECRG00000011960) #32 upf1 (ENSECRG00000012019) #30 comp (ENSECRG00000012162) CRTC1 (ENSECRG00000012346) ##28 klhl26 (ENSECRG00000012470) #27 ENSECRG00000012481 ENSECRG00000012490 ENSECRG00000012506 ENSECRG00000012514 ENSECRG00000012522 ENSECRG00000012533 ENSECRG00000012546 ENSECRG00000012561 ENSECRG00000012587 Elephant shark MODERN SPECIES 1549 ENSCMIG00000007047 GNA15 (ENSCMIG00000007046) C2CD4C (ENSCMIG00000007045) ifi30 (ENSCMIG00000007043) pik3r2 (ENSCMIG00000006897) MAST3 (ENSCMIG00000006760) ENSCMIG00000006728 klhl26 (ENSCMIG00000006708) #27 crtc1a (ENSCMIG00000006701) #28 ENSCMIG00000006370 upf1 (ENSCMIG00000006233) #30 ddx49 (ENSCMIG00000006215) #32 homer3b (ENSCMIG00000006208) #33 kxd1 (ENSCMIG00000006204) #21 ENSCMIG00000006201 uba52 (ENSCMIG00000006182) #22 ENSCMIG00000006176 ENSCMIG00000006170 S100A1 (ENSCMIG00000006167) ENSCMIG00000006166 ENSCMIG00000006163 ENSCMIG00000006159 ENSCMIG00000006155 sin3b (ENSCMIG00000006128) TPGS1 (ENSCMIG00000006107) ENSCMIG00000006104 shc2 (ENSCMIG00000006075) lsm4 (ENSCMIG00000006055) #13 jund (ENSCMIG00000006046) #12 ENSCMIG00000006040 ENSCMIG00000006039 Cyclostomata ANCESTRAL SPECIES ENSGT00940000153593 #22 Hagfish MODERN SPECIES 1050 ENSEBUG00000016627 ENSEBUG00000008145 ENSEBUG00000005028 ENSEBUG00000001971 ENSEBUG00000012083 ENSEBUG00000010002 ENSEBUG00000014904 ENSEBUG00000007538 ENSEBUG00000008695 ENSEBUG00000005691 ENSEBUG00000000809 kcnma1a (ENSEBUG00000016358) ENSEBUG00000016414 ENSEBUG00000014977 qtrt1 (ENSEBUG00000005878) uba52 (ENSEBUG00000003268) #22 ENSEBUG00000005577 ENSEBUG00000010683 ENSEBUG00000007529 ENSEBUG00000006878 SCD5 (ENSEBUG00000003421) ENSEBUG00000012514 ENSEBUG00000014381 ENSEBUG00000007198