Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000163317	ENSGT00940000161569.c	ENSGT00940000153840.a.a	ENSGT00440000033919	ENSGT00940000155223.b	ENSGT00940000163180	ENSGT00940000160240	ENSGT00390000007512.q	ENSGT00390000002226	ENSGT00940000156555 #15	ENSGT00940000157428 #16	ENSGT00940000154322.A #19	ENSGT00940000156843 #20	ENSGT00940000159856 #21	ENSGT00940000163071	ENSGT00390000006009.a.a.a #22	ENSGT00390000006555 #24	ENSGT00940000158604 #25	ENSGT00940000160741 #27	ENSGT00390000004832	ENSGT00390000018316.b.a.b.b.a.a.a	ENSGT00940000156193	ENSGT00390000001360	ENSGT00940000155420.b	ENSGT00390000014787	ENSGT00390000009030	ENSGT00390000006762	ENSGT00940000155932	ENSGT00940000155585	ENSGT00390000000378.d.a	ENSGT00940000154503.b
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000163317	ENSGT00940000161569.c	ENSGT00940000153840.a.a	ENSGT00440000033919	ENSGT00940000155223.b	ENSGT00940000163180	ENSGT00940000160240	ENSGT00390000007512.q	ENSGT00390000002226	ENSGT00940000156555 #15	ENSGT00940000157428 #16	ENSGT00940000154322.A #19	ENSGT00940000156843 #20	ENSGT00940000159856 #21	ENSGT00940000163071	ENSGT00390000006009.a.a.a #22	ENSGT00390000006555 #24	ENSGT00940000158604 #25	ENSGT00940000160741 #27	ENSGT00390000004832	ENSGT00390000018316.b.a.b.b.a.a.a	ENSGT00940000156193	ENSGT00390000001360	ENSGT00940000155420.b	ENSGT00390000014787	ENSGT00390000009030	ENSGT00390000006762	ENSGT00940000155932	ENSGT00940000155585	ENSGT00390000000378.d.a	ENSGT00940000154503.b
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000163317	ENSGT00940000161569.c	ENSGT00940000153840.a.a	ENSGT00440000033919	ENSGT00940000155223.b	ENSGT00940000163180	ENSGT00940000160240	ENSGT00390000007512.q	ENSGT00390000002226	ENSGT00940000156555 #15	ENSGT00940000157428 #16	ENSGT00940000154322.A #19	ENSGT00940000156843 #20	ENSGT00940000159856 #21	ENSGT00940000163071	ENSGT00390000006009.a.a.a #22	ENSGT00390000006555 #24	ENSGT00940000158604 #25	ENSGT00940000160741 #27	ENSGT00390000004832	ENSGT00390000018316.b.a.b.b.a.a.a	ENSGT00940000156193	ENSGT00390000001360	ENSGT00940000155420.b	ENSGT00390000014787	ENSGT00390000009030	ENSGT00390000006762	ENSGT00940000155932	ENSGT00940000155585	ENSGT00390000000378.d.a	ENSGT00940000154503.b
Steppe mouse	MODERN SPECIES	3403									Hlf (ENSMSIG00000030795) #15	Mmd (ENSMSIG00000030793) #16	ENSMSIG00000030792 #17	ENSMSIG00000030787 #18	Tmem100 (ENSMSIG00000030786) #19	Pctp (ENSMSIG00000030783) #20	Ankfn1 (ENSMSIG00000030769) #21	Nog (ENSMSIG00000030767) #22	ENSMSIG00000030765 #23	Gm525 (ENSMSIG00000030759) #24	Dgke (ENSMSIG00000030748) #25	ENSMSIG00000030746 #26	Trim25 (ENSMSIG00000030740) #27
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0017817	Nme2 (MGP_SPRETEiJ_G0017816)	MGP_SPRETEiJ_G0017815	Utp18 (MGP_SPRETEiJ_G0017814)	Car10 (MGP_SPRETEiJ_G0017813)	Kif2b (MGP_SPRETEiJ_G0017812)	Tom1l1 (MGP_SPRETEiJ_G0017811)	Cox11 (MGP_SPRETEiJ_G0017810)	Stxbp4 (MGP_SPRETEiJ_G0017809)	Hlf (MGP_SPRETEiJ_G0017808) #15	Mmd (MGP_SPRETEiJ_G0017807) #16	Tmem100 (MGP_SPRETEiJ_G0017806) #19	Pctp (MGP_SPRETEiJ_G0017805) #20	MGP_SPRETEiJ_G0017804 #21	MGP_SPRETEiJ_G0017803	Nog (MGP_SPRETEiJ_G0017802) #22	Gm525 (MGP_SPRETEiJ_G0017801) #24	Dgke (MGP_SPRETEiJ_G0017800) #25	Trim25 (MGP_SPRETEiJ_G0017799) #27	Elobl (MGP_SPRETEiJ_G0017798)	Scpep1 (MGP_SPRETEiJ_G0017797)	Akap1 (MGP_SPRETEiJ_G0017796)	Msi2 (MGP_SPRETEiJ_G0017795)	Ccdc182 (MGP_SPRETEiJ_G0017794)	Mrps23 (MGP_SPRETEiJ_G0017793)	Cuedc1 (MGP_SPRETEiJ_G0017792)	Vezf1 (MGP_SPRETEiJ_G0017791)	Srsf1 (MGP_SPRETEiJ_G0017790)	Dynll2 (MGP_SPRETEiJ_G0017789)	MGP_SPRETEiJ_G0017788	Epx (MGP_SPRETEiJ_G0017787)
Mouse	MODERN SPECIES	2	Gm20390 (ENSMUSG00000091228)	Nme2 (ENSMUSG00000020857)	Mbtd1 (ENSMUSG00000059474)	Utp18 (ENSMUSG00000054079)	Car10 (ENSMUSG00000056158)	Kif2b (ENSMUSG00000046755)	Tom1l1 (ENSMUSG00000020541)	Cox11 (ENSMUSG00000020544)	Stxbp4 (ENSMUSG00000020546)	Hlf (ENSMUSG00000003949) #15	Mmd (ENSMUSG00000003948) #16	Smim36 (ENSMUSG00000110344)	Tmem100 (ENSMUSG00000069763) #19	Pctp (ENSMUSG00000020553) #20	Ankfn1 (ENSMUSG00000047773) #21	Nog (ENSMUSG00000048616) #22	Gm525 (ENSMUSG00000072553) #24	Dgke (ENSMUSG00000000276) #25	Trim25 (ENSMUSG00000000275) #27	Coil (ENSMUSG00000033983)	Elobl (ENSMUSG00000057534)	Scpep1 (ENSMUSG00000000278)	Akap1 (ENSMUSG00000018428)	Msi2 (ENSMUSG00000069769)	Ccdc182 (ENSMUSG00000034031)	Mrps23 (ENSMUSG00000023723)	Cuedc1 (ENSMUSG00000018378)	Vezf1 (ENSMUSG00000018377)	Srsf1 (ENSMUSG00000018379)	Dynll2 (ENSMUSG00000020483)	Or4d1 (ENSMUSG00000060787)
Ryukyu mouse	MODERN SPECIES	2	MGP_CAROLIEiJ_G0016971	Nme2 (MGP_CAROLIEiJ_G0016970)	Mbtd1 (MGP_CAROLIEiJ_G0016969)	Utp18 (MGP_CAROLIEiJ_G0016968)	Car10 (MGP_CAROLIEiJ_G0016967)	Kif2b (MGP_CAROLIEiJ_G0016966)	Tom1l1 (MGP_CAROLIEiJ_G0016965)	Cox11 (MGP_CAROLIEiJ_G0016964)	Stxbp4 (MGP_CAROLIEiJ_G0016963)	Hlf (MGP_CAROLIEiJ_G0016962) #15	Mmd (MGP_CAROLIEiJ_G0016961) #16	Tmem100 (MGP_CAROLIEiJ_G0016960) #19	Pctp (MGP_CAROLIEiJ_G0016959) #20	MGP_CAROLIEiJ_G0016958 #21	MGP_CAROLIEiJ_G0016957	Nog (MGP_CAROLIEiJ_G0016956) #22	Gm525 (MGP_CAROLIEiJ_G0016955) #24	Dgke (MGP_CAROLIEiJ_G0016954) #25	Trim25 (MGP_CAROLIEiJ_G0016953) #27	Coil (MGP_CAROLIEiJ_G0016952)	MGP_CAROLIEiJ_G0016951	Scpep1 (MGP_CAROLIEiJ_G0016950)	Akap1 (MGP_CAROLIEiJ_G0016949)	Msi2 (MGP_CAROLIEiJ_G0016948)	Ccdc182 (MGP_CAROLIEiJ_G0016947)	Mrps23 (MGP_CAROLIEiJ_G0016946)	MGP_CAROLIEiJ_G0016945	Vezf1 (MGP_CAROLIEiJ_G0016944)	Srsf1 (MGP_CAROLIEiJ_G0016943)	Dynll2 (MGP_CAROLIEiJ_G0016942)	MGP_CAROLIEiJ_G0016941