Tetrapoda	ANCESTRAL SPECIES	46	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808 #28	ENSGT00940000156292 #29	ENSGT00940000163949	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00950000183080.a.b.b	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00940000164674
Amniota	ANCESTRAL SPECIES	14	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838
Mammalia	ANCESTRAL SPECIES	12	ENSGT00940000154756.A	ENSGT00940000154756.B	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538
Theria	ANCESTRAL SPECIES	9	ENSGT00940000154756.A	ENSGT00940000154756.B	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Eutheria	ANCESTRAL SPECIES	4	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Primates	ANCESTRAL SPECIES	3	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.h.a.b	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.h #33	ENSGT00530000063282.t.h.a.b	ENSGT00390000010523.c.a	ENSGT00940000159225.h	ENSGT00530000063688.b	ENSGT00910000148294
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.g ##33	ENSGT00530000063282.t.h.a.b.c.a.b	ENSGT00390000002361.b	ENSGT00940000159225.h	ENSGT00530000063688.b	ENSGT00910000148294
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.h #33	ENSGT00860000134110	ENSGT00530000063282.t.h.a.b.c.a.b	ENSGT00390000002361.b	ENSGT00940000159225.h	ENSGT00530000063688.b
Human	MODERN SPECIES	8	FAM171A2 (ENSG00000161682) #7	ITGA2B (ENSG00000005961) #8	GPATCH8 (ENSG00000186566) #9	FZD2 (ENSG00000180340) #10	MEIOC (ENSG00000180336) #11	CCDC43 (ENSG00000180329) #12	DBF4B (ENSG00000161692) #13	ADAM11 (ENSG00000073670) #14	GJC1 (ENSG00000182963) #15	HIGD1B (ENSG00000131097) #16	EFTUD2 (ENSG00000108883) #17	CCDC103 (ENSG00000167131) #18	GFAP (ENSG00000131095) #19	FAM187A (ENSG00000214447) #20	KIF18B (ENSG00000186185) #21	NMT1 (ENSG00000136448) #22	C1QL1 (ENSG00000131094) #23	DCAKD (ENSG00000172992) #24	PLCD3 (ENSG00000161714) #25	ACBD4 (ENSG00000181513) #26	HEXIM1 (ENSG00000186834) #27	HEXIM2 (ENSG00000168517) #28	FMNL1 (ENSG00000184922) #29	SPATA32 (ENSG00000184361) #30	MAP3K14 (ENSG00000006062) #31	ARHGAP27 (ENSG00000159314) #32	PLEKHM1 (ENSG00000225190) #33	LINC02210-CRHR1 (ENSG00000263715) #34	CRHR1 (ENSG00000120088) #35	SPPL2C (ENSG00000185294) #36	MAPT (ENSG00000186868) #37
Pan	ANCESTRAL SPECIES	3	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.h #33	ENSGT00860000134110	ENSGT00530000063282.t.h.a.b.c.a.b	ENSGT00390000002361.b	ENSGT00940000159225.h	ENSGT00530000063688.b
Bonobo	MODERN SPECIES	8	ENSPPAG00000041757	ITGA2B (ENSPPAG00000039841) #8	GPATCH8 (ENSPPAG00000040523) #9	MEIOC (ENSPPAG00000029831) #11	CCDC43 (ENSPPAG00000032186) #12	DBF4B (ENSPPAG00000034464) #13	ADAM11 (ENSPPAG00000033992) #14	GJC1 (ENSPPAG00000012416) #15	HIGD1B (ENSPPAG00000037224) #16	EFTUD2 (ENSPPAG00000029450) #17	CCDC103 (ENSPPAG00000008476) #18	GFAP (ENSPPAG00000042303) #19	KIF18B (ENSPPAG00000038631) #21	C1QL1 (ENSPPAG00000033314) #23	DCAKD (ENSPPAG00000042158) #24	NMT1 (ENSPPAG00000038322) #22	PLCD3 (ENSPPAG00000036929) #25	ENSPPAG00000029461 #26	HEXIM1 (ENSPPAG00000013758) #27	HEXIM2 (ENSPPAG00000009894) #28	ENSPPAG00000039655	FMNL1 (ENSPPAG00000038514) #29	SPATA32 (ENSPPAG00000036262) #30	MAP3K14 (ENSPPAG00000040950) #31	ARHGAP27 (ENSPPAG00000042273) #32	PLEKHM1 (ENSPPAG00000039949) #33	CRHR1 (ENSPPAG00000044112) #35	SPPL2C (ENSPPAG00000026104) #36	MAPT (ENSPPAG00000005022) #37	KANSL1 (ENSPPAG00000035503)	ENSPPAG00000037357
Chimpanzee	MODERN SPECIES	8	FZD2 (ENSPTRG00000009279) #10	ENSPTRG00000043630	MEIOC (ENSPTRG00000009281) #11	CCDC43 (ENSPTRG00000009282) #12	ENSPTRG00000049299	DBF4B (ENSPTRG00000009283) #13	ADAM11 (ENSPTRG00000009284) #14	GJC1 (ENSPTRG00000046451) #15	HIGD1B (ENSPTRG00000009286) #16	EFTUD2 (ENSPTRG00000009287) #17	CCDC103 (ENSPTRG00000009288) #18	GFAP (ENSPTRG00000009289) #19	KIF18B (ENSPTRG00000009290) #21	C1QL1 (ENSPTRG00000009292) #23	DCAKD (ENSPTRG00000009294) #24	NMT1 (ENSPTRG00000009295) #22	PLCD3 (ENSPTRG00000052044) #25	ACBD4 (ENSPTRG00000009297) #26	HEXIM1 (ENSPTRG00000049378) #27	HEXIM2 (ENSPTRG00000009299) #28	ENSPTRG00000045393	FMNL1 (ENSPTRG00000009300) #29	SPATA32 (ENSPTRG00000009301) #30	MAP3K14 (ENSPTRG00000034405) #31	ARHGAP27 (ENSPTRG00000009304) #32	PLEKHM1 (ENSPTRG00000009306) #33	ENSPTRG00000009307	ENSPTRG00000009256	ENSPTRG00000045095	ENSPTRG00000048632	KANSL1 (ENSPTRG00000009315)
Gorilla	MODERN SPECIES	18	GPATCH8 (ENSGGOG00000013860) #9	FZD2 (ENSGGOG00000006816) #10	MEIOC (ENSGGOG00000012195) #11	CCDC43 (ENSGGOG00000015272) #12	ENSGGOG00000041530	DBF4B (ENSGGOG00000003526) #13	ADAM11 (ENSGGOG00000003536) #14	GJC1 (ENSGGOG00000040911) #15	HIGD1B (ENSGGOG00000012991) #16	EFTUD2 (ENSGGOG00000012999) #17	CCDC103 (ENSGGOG00000034979) #18	GFAP (ENSGGOG00000013019) #19	KIF18B (ENSGGOG00000013025) #21	C1QL1 (ENSGGOG00000025267) #23	DCAKD (ENSGGOG00000009568) #24	NMT1 (ENSGGOG00000014422) #22	PLCD3 (ENSGGOG00000014717) #25	ENSGGOG00000014360 #26	HEXIM1 (ENSGGOG00000014370) #27	HEXIM2 (ENSGGOG00000007926) #28	ENSGGOG00000042212	FMNL1 (ENSGGOG00000004528) #29	SPATA32 (ENSGGOG00000004537) #30	MAP3K14 (ENSGGOG00000004540) #31	ENSGGOG00000000800 #32	ENSGGOG00000012863 ##33	ENSGGOG00000004158	CRHR1 (ENSGGOG00000011468) #35	SPPL2C (ENSGGOG00000011476) #36	ENSGGOG00000039049	MAPT (ENSGGOG00000005522) #37
Orangutan	MODERN SPECIES	8	FZD2 (ENSPPYG00000008328) #10	ENSPPYG00000033533	MEIOC (ENSPPYG00000008327) #11	CCDC43 (ENSPPYG00000008326) #12	ENSPPYG00000008325 #13	ADAM11 (ENSPPYG00000008324) #14	GJC1 (ENSPPYG00000008323) #15	HIGD1B (ENSPPYG00000008322) #16	EFTUD2 (ENSPPYG00000008320) #17	CCDC103 (ENSPPYG00000038309) #18	GFAP (ENSPPYG00000008318) #19	FAM187A (ENSPPYG00000035825) #20	KIF18B (ENSPPYG00000008317) #21	C1QL1 (ENSPPYG00000040305) #23	DCAKD (ENSPPYG00000037981) #24	NMT1 (ENSPPYG00000008314) #22	PLCD3 (ENSPPYG00000008313) #25	ACBD4 (ENSPPYG00000008311) #26	HEXIM1 (ENSPPYG00000037666) #27	HEXIM2 (ENSPPYG00000035092) #28	FMNL1 (ENSPPYG00000008309) #29	SPATA32 (ENSPPYG00000008308) #30	MAP3K14 (ENSPPYG00000008306) #31	ARHGAP27 (ENSPPYG00000008305) #32	PLEKHM1 (ENSPPYG00000008301) ##33	ENSPPYG00000008496	ENSPPYG00000030443	ENSPPYG00000041607	KANSL1 (ENSPPYG00000008300)	MAPT (ENSPPYG00000008298) #37	SPPL2C (ENSPPYG00000008297) #36
Gibbon	MODERN SPECIES	9	GRN (ENSNLEG00000005286)	FAM171A2 (ENSNLEG00000005280) #7	FZD2 (ENSNLEG00000005276) #10	MEIOC (ENSNLEG00000005262) #11	CCDC43 (ENSNLEG00000005253) #12	ENSNLEG00000005239 #13	ADAM11 (ENSNLEG00000005231) #14	GJC1 (ENSNLEG00000028301) #15	HIGD1B (ENSNLEG00000005226) #16	EFTUD2 (ENSNLEG00000005210) #17	CCDC103 (ENSNLEG00000005200) #18	GFAP (ENSNLEG00000005151) #19	ENSNLEG00000005145	ENSNLEG00000028460 #23	DCAKD (ENSNLEG00000005133) #24	NMT1 (ENSNLEG00000005088) #22	PLCD3 (ENSNLEG00000005078) #25	ENSNLEG00000005043 #26	HEXIM1 (ENSNLEG00000029192) #27	HEXIM2 (ENSNLEG00000031095) #28	ENSNLEG00000005025 #29	SPATA32 (ENSNLEG00000005016) #30	MAP3K14 (ENSNLEG00000004986) #31	PLEKHM1 (ENSNLEG00000004936) #33	ENSNLEG00000036274	ENSNLEG00000004922	WNT9B (ENSNLEG00000004916)	WNT3 (ENSNLEG00000004909)	NSF (ENSNLEG00000004836)	ENSNLEG00000031038	ENSNLEG00000004810 #35
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00860000135559	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00530000063282.t.f.a.a	ENSGT00860000134110	ENSGT00530000063282.t.f.b	ENSGT00390000010523.c.a
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00530000063282.t.f.a.a	ENSGT00860000134110	ENSGT00530000063282.t.f.b	ENSGT00390000010523.c.a
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00860000135559.a	ENSGT00530000063282.t.f.a.a	ENSGT00530000063282.t.f.b.c	ENSGT00390000010523.c.a
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000161812 #10	ENSGT00940000166143.A.a.a.a.b	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000163244.d.b.a.b.b.a.a.b.a.b.b.a	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00860000135559.a.a	ENSGT00530000063282.t.f.a.a	ENSGT00530000063282.t.f.b.c
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000060711	FZD2 (ENSMFAG00000037380) #10	ENSMFAG00000048661	MEIOC (ENSMFAG00000030785) #11	CCDC43 (ENSMFAG00000059939) #12	DBF4B (ENSMFAG00000041272) #13	ADAM11 (ENSMFAG00000035588) #14	EFTUD2 (ENSMFAG00000042655) #17	HIGD1B (ENSMFAG00000045678) #16	CCDC103 (ENSMFAG00000001556) #18	GFAP (ENSMFAG00000042945) #19	FAM187A (ENSMFAG00000006235) #20	KIF18B (ENSMFAG00000003134) #21	C1QL1 (ENSMFAG00000062088) #23	DCAKD (ENSMFAG00000059706) #24	NMT1 (ENSMFAG00000043205) #22	PLCD3 (ENSMFAG00000044688) #25	ACBD4 (ENSMFAG00000045120) #26	HEXIM1 (ENSMFAG00000030480) #27	HEXIM2 (ENSMFAG00000032794) #28	ENSMFAG00000059000	FMNL1 (ENSMFAG00000033275) #29	SPATA32 (ENSMFAG00000044892) #30	MAP3K14 (ENSMFAG00000034101) #31	ARHGAP27 (ENSMFAG00000001149) #32	PLEKHM1 (ENSMFAG00000032118) #33	ENSMFAG00000031751	ENSMFAG00000015655	ENSMFAG00000057825	ENSMFAG00000063390	ENSMFAG00000062364
Rhesus	MODERN SPECIES	7	FZD2 (ENSMMUG00000011038) #10	ENSMMUG00000064290	MEIOC (ENSMMUG00000015047) #11	CCDC43 (ENSMMUG00000015049) #12	DBF4B (ENSMMUG00000005456) #13	ADAM11 (ENSMMUG00000029927) #14	GJC1 (ENSMMUG00000005458) #15	HIGD1B (ENSMMUG00000054498) #16	EFTUD2 (ENSMMUG00000013118) #17	CCDC103 (ENSMMUG00000013117) #18	FAM187A (ENSMMUG00000013116) #20	GFAP (ENSMMUG00000013115) #19	KIF18B (ENSMMUG00000013113) #21	C1QL1 (ENSMMUG00000011009) #23	DCAKD (ENSMMUG00000062273) #24	NMT1 (ENSMMUG00000013586) #22	PLCD3 (ENSMMUG00000013587) #25	ACBD4 (ENSMMUG00000013589) #26	HEXIM1 (ENSMMUG00000062972) #27	HEXIM2 (ENSMMUG00000000713) #28	ENSMMUG00000061228	FMNL1 (ENSMMUG00000007859) #29	ENSMMUG00000056917	SPATA32 (ENSMMUG00000007861) #30	MAP3K14 (ENSMMUG00000007863) #31	ENSMMUG00000060665	ARHGAP27 (ENSMMUG00000021932) #32	PLEKHM1 (ENSMMUG00000008459) #33	ENSMMUG00000052844	ENSMMUG00000008199	ENSMMUG00000051775
Pig-tailed macaque	MODERN SPECIES	91	ENSMNEG00000006864	FZD2 (ENSMNEG00000034797) #10	MEIOC (ENSMNEG00000006081) #11	CCDC43 (ENSMNEG00000036324) #12	DBF4B (ENSMNEG00000030795) #13	ADAM11 (ENSMNEG00000037623) #14	GJC1 (ENSMNEG00000005415) #15	HIGD1B (ENSMNEG00000034105) #16	EFTUD2 (ENSMNEG00000037895) #17	CCDC103 (ENSMNEG00000008913) #18	FAM187A (ENSMNEG00000020971) #20	GFAP (ENSMNEG00000028726) #19	KIF18B (ENSMNEG00000034848) #21	C1QL1 (ENSMNEG00000036619) #23	DCAKD (ENSMNEG00000045405) #24	NMT1 (ENSMNEG00000042446) #22	PLCD3 (ENSMNEG00000027995) #25	ACBD4 (ENSMNEG00000039657) #26	HEXIM1 (ENSMNEG00000000901) #27	HEXIM2 (ENSMNEG00000032116) #28	ENSMNEG00000044598	FMNL1 (ENSMNEG00000034963) #29	SPATA32 (ENSMNEG00000028134) #30	MAP3K14 (ENSMNEG00000016195) #31	ARHGAP27 (ENSMNEG00000036495) #32	PLEKHM1 (ENSMNEG00000033471) #33	ENSMNEG00000040831	ENSMNEG00000038242	ENSMNEG00000034771	ENSMNEG00000028039	RPRML (ENSMNEG00000010617)
Cercopithecinae_b	ANCESTRAL SPECIES	19	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00860000135559.a	ENSGT00530000063282.t.f.a.a	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	96	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.a	ENSGT00860000135559.a	ENSGT00530000063282.t.f.a.a	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Drill	MODERN SPECIES	931	ENSMLEG00000030333	FZD2 (ENSMLEG00000006521) #10	MEIOC (ENSMLEG00000038241) #11	CCDC43 (ENSMLEG00000031310) #12	DBF4B (ENSMLEG00000029349) #13	ADAM11 (ENSMLEG00000040854) #14	GJC1 (ENSMLEG00000027020) #15	HIGD1B (ENSMLEG00000035387) #16	EFTUD2 (ENSMLEG00000032960) #17	CCDC103 (ENSMLEG00000032020) #18	GFAP (ENSMLEG00000037467) #19	FAM187A (ENSMLEG00000003926) #20	KIF18B (ENSMLEG00000041518) #21	ENSMLEG00000015827	DCAKD (ENSMLEG00000008583) #24	NMT1 (ENSMLEG00000039019) #22	PLCD3 (ENSMLEG00000032855) #25	ACBD4 (ENSMLEG00000035077) #26	HEXIM1 (ENSMLEG00000024845) #27	HEXIM2 (ENSMLEG00000038451) #28	FMNL1 (ENSMLEG00000029613) #29	ENSMLEG00000035211	SPATA32 (ENSMLEG00000038188) #30	MAP3K14 (ENSMLEG00000032597) #31	ARHGAP27 (ENSMLEG00000036933) #32	PLEKHM1 (ENSMLEG00000043419) #33
Sooty mangabey	MODERN SPECIES	112	ENSCATG00000031513	FZD2 (ENSCATG00000034121) #10	MEIOC (ENSCATG00000042926) #11	CCDC43 (ENSCATG00000042059) #12	DBF4B (ENSCATG00000036944) #13	ADAM11 (ENSCATG00000033976) #14	GJC1 (ENSCATG00000017540) #15	HIGD1B (ENSCATG00000029339) #16	EFTUD2 (ENSCATG00000035809) #17	CCDC103 (ENSCATG00000039874) #18	GFAP (ENSCATG00000017835) #19	FAM187A (ENSCATG00000017481) #20	KIF18B (ENSCATG00000006268) #21	C1QL1 (ENSCATG00000039240) #23	DCAKD (ENSCATG00000033038) #24	NMT1 (ENSCATG00000018120) #22	PLCD3 (ENSCATG00000033684) #25	ACBD4 (ENSCATG00000020131) #26	HEXIM1 (ENSCATG00000014762) #27	HEXIM2 (ENSCATG00000034723) #28	FMNL1 (ENSCATG00000036757) #29	ENSCATG00000023789	SPATA32 (ENSCATG00000034878) #30	MAP3K14 (ENSCATG00000037515) #31	ARHGAP27 (ENSCATG00000031026) #32	PLEKHM1 (ENSCATG00000023812) #33	ENSCATG00000030951	ENSCATG00000032135	RPRML (ENSCATG00000018465)	GOSR2 (ENSCATG00000030385)	WNT9B (ENSCATG00000045103)
Olive baboon	MODERN SPECIES	8	ITGA2B (ENSPANG00000021298) #8	GPATCH8 (ENSPANG00000021304) #9	FZD2 (ENSPANG00000021305) #10	MEIOC (ENSPANG00000021313) #11	CCDC43 (ENSPANG00000021312) #12	DBF4B (ENSPANG00000021279) #13	ADAM11 (ENSPANG00000021280) #14	HIGD1B (ENSPANG00000037986) #16	EFTUD2 (ENSPANG00000021284) #17	CCDC103 (ENSPANG00000021285) #18	GFAP (ENSPANG00000021287) #19	FAM187A (ENSPANG00000010825) #20	KIF18B (ENSPANG00000021278) #21	C1QL1 (ENSPANG00000021253) #23	DCAKD (ENSPANG00000049425) #24	NMT1 (ENSPANG00000021256) #22	PLCD3 (ENSPANG00000021259) #25	ACBD4 (ENSPANG00000021252) #26	HEXIM1 (ENSPANG00000017530) #27	HEXIM2 (ENSPANG00000021251) #28	FMNL1 (ENSPANG00000021231) #29	SPATA32 (ENSPANG00000021234) #30	MAP3K14 (ENSPANG00000021235) #31	ARHGAP27 (ENSPANG00000021236) #32	PLEKHM1 (ENSPANG00000021196) #33	ENSPANG00000021200	ENSPANG00000018894	ENSPANG00000042130	RPRML (ENSPANG00000021201)	GOSR2 (ENSPANG00000021202)	WNT9B (ENSPANG00000021203)
Vervet Monkey	MODERN SPECIES	7	GPATCH8 (ENSCSAG00000003586) #9	FZD2 (ENSCSAG00000019022) #10	MEIOC (ENSCSAG00000003590) #11	CCDC43 (ENSCSAG00000003595) #12	DBF4B (ENSCSAG00000003600) #13	ADAM11 (ENSCSAG00000003607) #14	GJC1 (ENSCSAG00000019021) #15	HIGD1B (ENSCSAG00000003609) #16	EFTUD2 (ENSCSAG00000003614) #17	CCDC103 (ENSCSAG00000003619) #18	FAM187A (ENSCSAG00000019020) #20	GFAP (ENSCSAG00000003624) #19	KIF18B (ENSCSAG00000003636) #21	C1QL1 (ENSCSAG00000003650) #23	DCAKD (ENSCSAG00000003651) #24	NMT1 (ENSCSAG00000003656) #22	PLCD3 (ENSCSAG00000003668) #25	ACBD4 (ENSCSAG00000003671) #26	HEXIM1 (ENSCSAG00000019019) #27	HEXIM2 (ENSCSAG00000003672) #28	FMNL1 (ENSCSAG00000003675) #29	SPATA32 (ENSCSAG00000003678) #30	MAP3K14 (ENSCSAG00000003680) #31	ARHGAP27 (ENSCSAG00000003697) #32	PLEKHM1 (ENSCSAG00000003707) #33	ENSCSAG00000003723	ENSCSAG00000003734	ENSCSAG00000003735	RPRML (ENSCSAG00000019018)	GOSR2 (ENSCSAG00000003738)	WNT9B (ENSCSAG00000003743)
Rhinopithecus	ANCESTRAL SPECIES	106	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.f.a.b.b
Black snub-nosed monkey	MODERN SPECIES	536	GPATCH8 (ENSRBIG00000033713) #9	ENSRBIG00000033468	MEIOC (ENSRBIG00000040900) #11	CCDC43 (ENSRBIG00000034075) #12	DBF4B (ENSRBIG00000043670) #13	ENSRBIG00000044353	ADAM11 (ENSRBIG00000042128) #14	GJC1 (ENSRBIG00000023622) #15	HIGD1B (ENSRBIG00000043428) #16	EFTUD2 (ENSRBIG00000043255) #17	CCDC103 (ENSRBIG00000031618) #18	GFAP (ENSRBIG00000040629) #19	FAM187A (ENSRBIG00000015283) #20	KIF18B (ENSRBIG00000034858) #21	DCAKD (ENSRBIG00000032257) #24	NMT1 (ENSRBIG00000028080) #22	PLCD3 (ENSRBIG00000035837) #25	ACBD4 (ENSRBIG00000036637) #26	HEXIM2 (ENSRBIG00000041800) #28	FMNL1 (ENSRBIG00000024240) #29	ENSRBIG00000035364	SPATA32 (ENSRBIG00000041949) #30	MAP3K14 (ENSRBIG00000036019) #31	ARHGAP27 (ENSRBIG00000028468) #32
Golden snub-nosed monkey	MODERN SPECIES	2894	ENSRROG00000033285	FZD2 (ENSRROG00000036073) #10	MEIOC (ENSRROG00000036868) #11	CCDC43 (ENSRROG00000039422) #12	DBF4B (ENSRROG00000039524) #13	ADAM11 (ENSRROG00000040222) #14	GJC1 (ENSRROG00000011283) #15	HIGD1B (ENSRROG00000044316) #16	EFTUD2 (ENSRROG00000042925) #17	CCDC103 (ENSRROG00000031106) #18	GFAP (ENSRROG00000034816) #19	FAM187A (ENSRROG00000016933) #20	KIF18B (ENSRROG00000040065) #21	C1QL1 (ENSRROG00000027243) #23	DCAKD (ENSRROG00000041832) #24	NMT1 (ENSRROG00000018254) #22	PLCD3 (ENSRROG00000039863) #25	ACBD4 (ENSRROG00000032214) #26	HEXIM1 (ENSRROG00000013037) #27	HEXIM2 (ENSRROG00000042011) #28
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.p.b #33	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085
Mas night monkey	MODERN SPECIES	734	ITGA2B (ENSANAG00000032886) #8	GPATCH8 (ENSANAG00000032773) #9	FZD2 (ENSANAG00000021258) #10	ENSANAG00000027620 #11	CCDC43 (ENSANAG00000035827) #12	DBF4B (ENSANAG00000020875) #13	ADAM11 (ENSANAG00000030699) #14	GJC1 (ENSANAG00000029290) #15	HIGD1B (ENSANAG00000022480) #16	EFTUD2 (ENSANAG00000025320) #17	CCDC103 (ENSANAG00000027558) #18	GFAP (ENSANAG00000031997) #19	KIF18B (ENSANAG00000024992) #21	C1QL1 (ENSANAG00000027609) #23	DCAKD (ENSANAG00000022810) #24	NMT1 (ENSANAG00000023426) #22	PLCD3 (ENSANAG00000021279) #25	ACBD4 (ENSANAG00000034648) #26	HEXIM1 (ENSANAG00000012950) #27	HEXIM2 (ENSANAG00000034525) #28	FMNL1 (ENSANAG00000029656) #29	ENSANAG00000027818	SPATA32 (ENSANAG00000028582) #30	MAP3K14 (ENSANAG00000032693) #31	ARHGAP27 (ENSANAG00000033399) #32	ENSANAG00000020957 #33	ENSANAG00000021373 #33	ENSANAG00000020992	ENSANAG00000014516	GOSR2 (ENSANAG00000034978)	WNT9B (ENSANAG00000026694)
Cebidae	ANCESTRAL SPECIES	25	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.p.b #33	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00940000155111.p.a #33
Marmoset	MODERN SPECIES	17	ADORA2B (ENSCJAG00000012216)	FZD2 (ENSCJAG00000015740) #10	MEIOC (ENSCJAG00000012224) #11	CCDC43 (ENSCJAG00000043807) #12	DBF4B (ENSCJAG00000012241) #13	ADAM11 (ENSCJAG00000012274) #14	GJC1 (ENSCJAG00000045848) #15	HIGD1B (ENSCJAG00000039133) #16	EFTUD2 (ENSCJAG00000012349) #17	CCDC103 (ENSCJAG00000047692) #18	GFAP (ENSCJAG00000012563) #19	FAM187A (ENSCJAG00000062458) #20	KIF18B (ENSCJAG00000012595) #21	C1QL1 (ENSCJAG00000012638) #23	DCAKD (ENSCJAG00000048133) #24	NMT1 (ENSCJAG00000012649) #22	PLCD3 (ENSCJAG00000012703) #25	ACBD4 (ENSCJAG00000012732) #26	ENSCJAG00000084946 #28	FMNL1 (ENSCJAG00000012745) #29	MAP3K14 (ENSCJAG00000012775) #31	ARHGAP27 (ENSCJAG00000012810) #32	PLEKHM1 (ENSCJAG00000012852) #33	ENSCJAG00000078265	ENSCJAG00000083546 #35	GOSR2 (ENSCJAG00000020030)	WNT9B (ENSCJAG00000020024)	NSF (ENSCJAG00000019994)	WNT3 (ENSCJAG00000020014)	ENSCJAG00000083737	ENSCJAG00000052410
Cebidae_a	ANCESTRAL SPECIES	17	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.p.a #33	ENSGT00940000158410 #35	ENSGT00940000155494 #37	ENSGT00530000063688.b	ENSGT00950000182950.C	ENSGT01030000234570.d.b.a.b.a	ENSGT01090000259987.b.b.a.a.b
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	228	FAM171A2 (ENSSBOG00000030776) #7	ITGA2B (ENSSBOG00000027819) #8	GPATCH8 (ENSSBOG00000023544) #9	MEIOC (ENSSBOG00000023771) #11	CCDC43 (ENSSBOG00000019636) #12	DBF4B (ENSSBOG00000023941) #13	ADAM11 (ENSSBOG00000029887) #14	GJC1 (ENSSBOG00000019767) #15	HIGD1B (ENSSBOG00000033731) #16	EFTUD2 (ENSSBOG00000021892) #17	CCDC103 (ENSSBOG00000030207) #18	GFAP (ENSSBOG00000020732) #19	KIF18B (ENSSBOG00000029491) #21	ENSSBOG00000029665	DCAKD (ENSSBOG00000027620) #24	ENSSBOG00000026353 #22	PLCD3 (ENSSBOG00000026284) #25	ACBD4 (ENSSBOG00000029293) #26	HEXIM1 (ENSSBOG00000016824) #27	HEXIM2 (ENSSBOG00000021727) #28	FMNL1 (ENSSBOG00000030224) #29	SPATA32 (ENSSBOG00000028350) #30	MAP3K14 (ENSSBOG00000034027) #31	ARHGAP27 (ENSSBOG00000034994) #32	PLEKHM1 (ENSSBOG00000029615) #33	ENSSBOG00000029992	ENSSBOG00000020588	RPRML (ENSSBOG00000009450)	GOSR2 (ENSSBOG00000026651)	WNT9B (ENSSBOG00000023584)	WNT3 (ENSSBOG00000032225)
Bolivian squirrel monkey	MODERN SPECIES	52	TMED8 (ENSSBOG00000028885)	SAMD15 (ENSSBOG00000031254)	NOXRED1 (ENSSBOG00000023408)	ENSSBOG00000009266	VIPAS39 (ENSSBOG00000029151)	AHSA1 (ENSSBOG00000028253)	ISM2 (ENSSBOG00000024120)	SPTLC2 (ENSSBOG00000029378)	ALKBH1 (ENSSBOG00000014817)	SLIRP (ENSSBOG00000020014)	ENSSBOG00000024915	ENSSBOG00000026452	ADCK1 (ENSSBOG00000031769)	NRXN3 (ENSSBOG00000009699)	ENSSBOG00000032459	ENSSBOG00000034789 #22	ENSSBOG00000028195	CEP128 (ENSSBOG00000022900)	TSHR (ENSSBOG00000024170)	ENSSBOG00000033932	GTF2A1 (ENSSBOG00000024174)	STON2 (ENSSBOG00000033919)	ENSSBOG00000028494	SEL1L (ENSSBOG00000004001)	ENSSBOG00000026702	FLRT2 (ENSSBOG00000008964)
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	217			FZD2 (ENSCCAG00000013379) #10	MEIOC (ENSCCAG00000036399) #11	CCDC43 (ENSCCAG00000022080) #12	DBF4B (ENSCCAG00000025518) #13	ADAM11 (ENSCCAG00000033535) #14	GJC1 (ENSCCAG00000015387) #15	HIGD1B (ENSCCAG00000030511) #16	EFTUD2 (ENSCCAG00000035302) #17	CCDC103 (ENSCCAG00000020429) #18	GFAP (ENSCCAG00000021668) #19	KIF18B (ENSCCAG00000020919) #21	C1QL1 (ENSCCAG00000033061) #23	DCAKD (ENSCCAG00000037979) #24	ENSCCAG00000035590 #22	PLCD3 (ENSCCAG00000034783) #25	ACBD4 (ENSCCAG00000026188) #26	HEXIM1 (ENSCCAG00000019243) #27	HEXIM2 (ENSCCAG00000036207) #28	FMNL1 (ENSCCAG00000031455) #29	SPATA32 (ENSCCAG00000032747) #30	MAP3K14 (ENSCCAG00000020607) #31	ARHGAP27 (ENSCCAG00000036222) #32	ENSCCAG00000030988 #33	CRHR1 (ENSCCAG00000023118) #35	MAPT (ENSCCAG00000034549) #37	KANSL1 (ENSCCAG00000031707)	CDC27 (ENSCCAG00000036589)	MYL4 (ENSCCAG00000021566)	ITGB3 (ENSCCAG00000033154)
Capuchin	MODERN SPECIES	464	P2RX5 (ENSCCAG00000027159)	EMC6 (ENSCCAG00000019813)	TAX1BP3 (ENSCCAG00000010037)	CTNS (ENSCCAG00000032904)	SHPK (ENSCCAG00000025094)	TRPV1 (ENSCCAG00000037184)	TRPV3 (ENSCCAG00000023042)	ASPA (ENSCCAG00000021470)	SPATA22 (ENSCCAG00000019824)	ENSCCAG00000011268	ENSCCAG00000018551	ENSCCAG00000021590	OR1R1P (ENSCCAG00000035346)	ENSCCAG00000034398	ENSCCAG00000023423	ENSCCAG00000030832 #22	ENSCCAG00000028343	ENSCCAG00000017857	ENSCCAG00000026141
Tarsier	MODERN SPECIES	2164															DCAKD (ENSTSYG00000037542) #24	NMT1 (ENSTSYG00000004807) #22	PLCD3 (ENSTSYG00000036268) #25
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Bushbaby	MODERN SPECIES	133	GPATCH8 (ENSOGAG00000033643) #9	FZD2 (ENSOGAG00000001863) #10	MEIOC (ENSOGAG00000001864) #11	CCDC43 (ENSOGAG00000001867) #12	ENSOGAG00000029447 #13	ADAM11 (ENSOGAG00000015813) #14	GJC1 (ENSOGAG00000031829) #15	HIGD1B (ENSOGAG00000012913) #16	EFTUD2 (ENSOGAG00000012918) #17	CCDC103 (ENSOGAG00000031528) #18	FAM187A (ENSOGAG00000029293) #20	GFAP (ENSOGAG00000012927) #19	KIF18B (ENSOGAG00000012930) #21	C1QL1 (ENSOGAG00000026812) #23	DCAKD (ENSOGAG00000012934) #24	NMT1 (ENSOGAG00000012938) #22	PLCD3 (ENSOGAG00000031628) #25	ACBD4 (ENSOGAG00000009305) #26	HEXIM1 (ENSOGAG00000009304) #27	HEXIM2 (ENSOGAG00000009303) #28	FMNL1 (ENSOGAG00000030119) #29	ENSOGAG00000026250	SPATA32 (ENSOGAG00000012742) #30	MAP3K14 (ENSOGAG00000030063) #31	ARHGAP27 (ENSOGAG00000001888) #32	PLEKHM1 (ENSOGAG00000001889) #33	ENSOGAG00000028559	RDM1 (ENSOGAG00000011332)	RPRML (ENSOGAG00000029732)	GOSR2 (ENSOGAG00000006123)	WNT9B (ENSOGAG00000006121)
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Lemuriformes_a	ANCESTRAL SPECIES	180			ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31
Greater bamboo lemur	MODERN SPECIES	715	MEIOC (ENSPSMG00000014383) #11	CCDC43 (ENSPSMG00000014412) #12	ENSPSMG00000014436 #13	ADAM11 (ENSPSMG00000014472) #14	GJC1 (ENSPSMG00000014486) #15	HIGD1B (ENSPSMG00000014497) #16	EFTUD2 (ENSPSMG00000014628) #17	ENSPSMG00000014705	CCDC103 (ENSPSMG00000014720) #18	GFAP (ENSPSMG00000014818) #19	FAM187A (ENSPSMG00000014853) #20	KIF18B (ENSPSMG00000014879) #21	C1QL1 (ENSPSMG00000014894) #23	ENSPSMG00000014899	DCAKD (ENSPSMG00000014919) #24	NMT1 (ENSPSMG00000014962) #22	PLCD3 (ENSPSMG00000014979) #25	ACBD4 (ENSPSMG00000015041) #26	HEXIM1 (ENSPSMG00000015109) #27	HEXIM2 (ENSPSMG00000015110) #28	FMNL1 (ENSPSMG00000015220) #29	ENSPSMG00000015254	SPATA32 (ENSPSMG00000015263) #30	MAP3K14 (ENSPSMG00000015303) #31	FZD2 (ENSPSMG00000015315) #10	GPATCH8 (ENSPSMG00000015348) #9	ITGA2B (ENSPSMG00000015372) #8	FAM171A2 (ENSPSMG00000015399) #7	GRN (ENSPSMG00000015437)	SLC25A39 (ENSPSMG00000015507)	RUNDC3A (ENSPSMG00000015623)
Coquerels sifaka	MODERN SPECIES	858				ENSPCOG00000013956	CCDC43 (ENSPCOG00000017474) #12	ADAM11 (ENSPCOG00000000120) #14	GJC1 (ENSPCOG00000006165) #15	ENSPCOG00000016383	HIGD1B (ENSPCOG00000016676) #16	EFTUD2 (ENSPCOG00000020029) #17	CCDC103 (ENSPCOG00000022209) #18	GFAP (ENSPCOG00000019693) #19	KIF18B (ENSPCOG00000014007) #21	C1QL1 (ENSPCOG00000017821) #23	DCAKD (ENSPCOG00000021263) #24	NMT1 (ENSPCOG00000028164) #22	PLCD3 (ENSPCOG00000024194) #25	ACBD4 (ENSPCOG00000019905) #26	HEXIM2 (ENSPCOG00000008648) #28	FMNL1 (ENSPCOG00000011242) #29	SPATA32 (ENSPCOG00000027545) #30	ENSPCOG00000024433 #31
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	7	ITGA2B (ENSMICG00000005146) #8	GPATCH8 (ENSMICG00000028586) #9	FZD2 (ENSMICG00000004687) #10	ENSMICG00000035785	ENSMICG00000035076	MEIOC (ENSMICG00000035951) #11	CCDC43 (ENSMICG00000032667) #12	ADAM11 (ENSMICG00000016353) #14	HIGD1B (ENSMICG00000016587) #16	EFTUD2 (ENSMICG00000016592) #17	CCDC103 (ENSMICG00000031382) #18	GFAP (ENSMICG00000016611) #19	KIF18B (ENSMICG00000047079) #21	C1QL1 (ENSMICG00000034951) #23	DCAKD (ENSMICG00000030498) #24	ENSMICG00000016650 #22	PLCD3 (ENSMICG00000016661) #25	ACBD4 (ENSMICG00000016677) #26	HEXIM2 (ENSMICG00000041666) #28	FMNL1 (ENSMICG00000016696) #29	ENSMICG00000036096	ENSMICG00000027582 #30	MAP3K14 (ENSMICG00000003887) #31	ENSMICG00000043481	ARHGAP27 (ENSMICG00000010460) #32	PLEKHM1 (ENSMICG00000010468) #33	ENSMICG00000047895	RDM1 (ENSMICG00000038651)	LYZL6 (ENSMICG00000045192)	RPRML (ENSMICG00000034059)	GOSR2 (ENSMICG00000010683)
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	11	IFI44 (ENSMICG00000001235)	IFI44L (ENSMICG00000031708)	PTGFR (ENSMICG00000035932)	GIPC2 (ENSMICG00000014492)	DNAJB4 (ENSMICG00000014487)	ENSMICG00000014463	NEXN (ENSMICG00000014456)	MIGA1 (ENSMICG00000030633)	USP33 (ENSMICG00000010681)	ZZZ3 (ENSMICG00000004495)	AK5 (ENSMICG00000004487)	ENSMICG00000005599	ENSMICG00000004478	ST6GALNAC5 (ENSMICG00000045831)	ST6GALNAC3 (ENSMICG00000027487)	ENSMICG00000042274 #22	ENSMICG00000026387	ASB17 (ENSMICG00000042539)	MSH4 (ENSMICG00000017811)	ENSMICG00000017810	ACADM (ENSMICG00000017809)	SLC44A5 (ENSMICG00000012206)	LHX8 (ENSMICG00000012199)	TYW3 (ENSMICG00000015883)	CRYZ (ENSMICG00000015873)	ENSMICG00000000880	ADORA3 (ENSMICG00000031902)	ENSMICG00000011501	INKA2 (ENSMICG00000033017)	DDX20 (ENSMICG00000011509)	KCND3 (ENSMICG00000046146)
Mouse lemur	MODERN SPECIES	28	CENPW (ENSMICG00000004516)	RSPO3 (ENSMICG00000008084)	RNF146 (ENSMICG00000036585)	ENSMICG00000009308	ENSMICG00000015070	KIAA0408 (ENSMICG00000035037)	SOGA3 (ENSMICG00000026401)	THEMIS (ENSMICG00000009877)	PTPRK (ENSMICG00000009882)	LAMA2 (ENSMICG00000017693)	ARHGAP18 (ENSMICG00000017694)	TMEM244 (ENSMICG00000000211)	L3MBTL3 (ENSMICG00000006114)	SAMD3 (ENSMICG00000006123)	TMEM200A (ENSMICG00000041995)	ENSMICG00000034933 #22	SMLR1 (ENSMICG00000035966)	EPB41L2 (ENSMICG00000015238)	AKAP7 (ENSMICG00000015262)	ARG1 (ENSMICG00000005535)	MED23 (ENSMICG00000002926)	ENPP3 (ENSMICG00000002944)	ENPP1 (ENSMICG00000002958)	CCN2 (ENSMICG00000029289)	MOXD1 (ENSMICG00000003214)	ENSMICG00000003220	ENSMICG00000036938	ENSMICG00000028342	TAAR2 (ENSMICG00000003235)	VNN1 (ENSMICG00000005229)	VNN2 (ENSMICG00000005236)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00960000191738	ENSGT00390000018397	ENSGT00530000063282.t	ENSGT00940000161690
Tree shrew	MODERN SPECIES	273												EFTUD2 (ENSTBEG00000011337) #17	GFAP (ENSTBEG00000011873) #19	ENSTBEG00000011994 #21	C1QL1 (ENSTBEG00000012263) #23	NMT1 (ENSTBEG00000012285) #22	PLCD3 (ENSTBEG00000012448) #25
Glires	ANCESTRAL SPECIES	3	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00960000191738	ENSGT00390000018397	ENSGT00530000063282.t	ENSGT00940000161690
Lagomorpha	ANCESTRAL SPECIES			ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b
Rabbit	MODERN SPECIES	10	RDM1 (ENSOCUG00000022704)	MEIOC (ENSOCUG00000012383) #11	CCDC43 (ENSOCUG00000017526) #12	ENSOCUG00000029587 #13	ADAM11 (ENSOCUG00000000736) #14	GJC1 (ENSOCUG00000012691) #15	HIGD1B (ENSOCUG00000006870) #16	EFTUD2 (ENSOCUG00000006879) #17	CCDC103 (ENSOCUG00000027042) #18	FAM187A (ENSOCUG00000006891) #20	GFAP (ENSOCUG00000006895) #19	ENSOCUG00000035630	ENSOCUG00000006899	C1QL1 (ENSOCUG00000026203) #23	DCAKD (ENSOCUG00000006904) #24	NMT1 (ENSOCUG00000006735) #22	PLCD3 (ENSOCUG00000017161) #25	ACBD4 (ENSOCUG00000006742) #26	HEXIM2 (ENSOCUG00000006750) #28	ENSOCUG00000012166 #29	ENSOCUG00000026483	ENSOCUG00000011580 #30	ARHGAP27 (ENSOCUG00000001336) #32	PLEKHM1 (ENSOCUG00000008555) #33	ENSOCUG00000003814	ENSOCUG00000014730 #10	GPATCH8 (ENSOCUG00000003291) #9	ITGA2B (ENSOCUG00000003273) #8	ENSOCUG00000013577 #7	GRN (ENSOCUG00000013567)	RUNDC3A (ENSOCUG00000006437)
Pika	MODERN SPECIES	4791															DCAKD (ENSOPRG00000012335) #24	NMT1 (ENSOPRG00000012341) #22	PLCD3 (ENSOPRG00000012355) #25	ENSOPRG00000012373 #26	HEXIM2 (ENSOPRG00000012395) #28	FMNL1 (ENSOPRG00000012398) #29	ENSOPRG00000012430 #30	MAP3K14 (ENSOPRG00000012474) #31	ARHGAP27 (ENSOPRG00000012496) #32	PLEKHM1 (ENSOPRG00000012510) #33	ENSOPRG00000012529
Rodentia	ANCESTRAL SPECIES	4	ENSGT00960000189914	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00530000063282.t	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Kangaroo rat	MODERN SPECIES	466	Itga2b (ENSDORG00000005776) #8	Gpatch8 (ENSDORG00000027664) #9	Fzd2 (ENSDORG00000014118) #10	Meioc (ENSDORG00000014320) #11	Ccdc43 (ENSDORG00000014319) #12	Adam11 (ENSDORG00000002878) #14	Gjc1 (ENSDORG00000002880) #15	Higd1b (ENSDORG00000011564) #16	Eftud2 (ENSDORG00000011566) #17	Ccdc103 (ENSDORG00000011570) #18	Fam187a (ENSDORG00000011571) #20	Gfap (ENSDORG00000011573) #19	Kif18b (ENSDORG00000011576) #21	C1ql1 (ENSDORG00000005204) #23	Dcakd (ENSDORG00000014584) #24	Nmt1 (ENSDORG00000000683) #22	Plcd3 (ENSDORG00000014726) #25	ENSDORG00000014728 #26	Hexim1 (ENSDORG00000014730) #27	Hexim2 (ENSDORG00000014731) #28	Fmnl1 (ENSDORG00000009265) #29	Efcab15 (ENSDORG00000025470)	Map3k14 (ENSDORG00000015740) #31	ENSDORG00000011490	Plekhm1 (ENSDORG00000008403) #33
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00530000063282.t	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Lesser Egyptian jerboa	MODERN SPECIES	56	ENSJJAG00000017437 #7	Itga2b (ENSJJAG00000018679) #8	Gpatch8 (ENSJJAG00000017797) #9	Fzd2 (ENSJJAG00000017757) #10	Meioc (ENSJJAG00000018328) #11	Adam11 (ENSJJAG00000017343) #14	Gjc1 (ENSJJAG00000021093) #15	Higd1b (ENSJJAG00000018346) #16	Eftud2 (ENSJJAG00000018268) #17	Ccdc103 (ENSJJAG00000019953) #18	Fam187a (ENSJJAG00000018189) #20	Gfap (ENSJJAG00000020764) #19	Kif18b (ENSJJAG00000020516) #21	C1ql1 (ENSJJAG00000017957) #23	Dcakd (ENSJJAG00000019907) #24	Nmt1 (ENSJJAG00000018432) #22	Plcd3 (ENSJJAG00000017645) #25	Acbd4 (ENSJJAG00000018616) #26	Hexim1 (ENSJJAG00000006094) #27	Hexim2 (ENSJJAG00000018759) #28	Fmnl1 (ENSJJAG00000018384) #29	Efcab15 (ENSJJAG00000018301)	ENSJJAG00000020711	Map3k14 (ENSJJAG00000018169) #31	Arhgap27 (ENSJJAG00000020224) #32	Plekhm1 (ENSJJAG00000020489) #33	Rdm1 (ENSJJAG00000020882)	Ccdc200 (ENSJJAG00000018284)	ENSJJAG00000017969	ENSJJAG00000020427	Brca1 (ENSJJAG00000020998)
Muroidea	ANCESTRAL SPECIES		ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00530000063282.t	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Itga2b (ENSNGAG00000021680) #8	Gpatch8 (ENSNGAG00000021860) #9	Fzd2 (ENSNGAG00000013523) #10	Meioc (ENSNGAG00000022546) #11	Ccdc43 (ENSNGAG00000022066) #12	Adam11 (ENSNGAG00000007518) #14	Gjc1 (ENSNGAG00000014791) #15	Higd1b (ENSNGAG00000016293) #16	Eftud2 (ENSNGAG00000017834) #17	Ccdc103 (ENSNGAG00000003970) #18	Fam187a (ENSNGAG00000012343) #20	Gfap (ENSNGAG00000018596) #19	Kif18b (ENSNGAG00000021669) #21	C1ql1 (ENSNGAG00000021352) #23	Dcakd (ENSNGAG00000021561) #24	Nmt1 (ENSNGAG00000023149) #22	Plcd3 (ENSNGAG00000022130) #25	Acbd4 (ENSNGAG00000003147) #26	Hexim1 (ENSNGAG00000004671) #27	Hexim2 (ENSNGAG00000008154) #28	Fmnl1 (ENSNGAG00000018866) #29	Efcab15 (ENSNGAG00000014012)	Map3k14 (ENSNGAG00000018057) #31	Arhgap27 (ENSNGAG00000021239) #32	Plekhm1 (ENSNGAG00000013194) #33	Kpnb1 (ENSNGAG00000017610)	Tbkbp1 (ENSNGAG00000021163)	Tbx21 (ENSNGAG00000002476)	Osbpl7 (ENSNGAG00000019382)	Mrpl10 (ENSNGAG00000022195)	Lrrc46 (ENSNGAG00000022557)
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00850000133618	ENSGT00940000161546	ENSGT00390000016335	ENSGT00440000034289	ENSGT00940000157020
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.t.a	ENSGT00530000063282.t.t.b	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Mus	ANCESTRAL SPECIES	2	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.t.a	ENSGT00530000063282.t.t.b	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159523 #9	ENSGT00860000135945	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.t.a	ENSGT00530000063282.t.t.b	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000159523 #9	ENSGT00860000135945	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.t.a	ENSGT00530000063282.t.t.b	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Mouse	MODERN SPECIES	2	Itga2b (ENSMUSG00000034664) #8	Gpatch8 (ENSMUSG00000034621) #9	Fzd2 (ENSMUSG00000050288) #10	Meioc (ENSMUSG00000051455) #11	Ccdc43 (ENSMUSG00000020925) #12	Adam11 (ENSMUSG00000020926) #14	Gjc1 (ENSMUSG00000034520) #15	Higd1b (ENSMUSG00000020928) #16	Eftud2 (ENSMUSG00000020929) #17	Ccdc103 (ENSMUSG00000020930) #18	Fam187a (ENSMUSG00000075510) #20	Gfap (ENSMUSG00000020932) #19	Kif18b (ENSMUSG00000051378) #21	C1ql1 (ENSMUSG00000045532) #23	Dcakd (ENSMUSG00000020935) #24	Nmt1 (ENSMUSG00000020936) #22	Plcd3 (ENSMUSG00000020937) #25	Acbd4 (ENSMUSG00000056938) #26	Hexim1 (ENSMUSG00000048878) #27	Hexim2 (ENSMUSG00000043372) #28	Fmnl1 (ENSMUSG00000055805) #29	Efcab15 (ENSMUSG00000020940)	Spata32 (ENSMUSG00000044787) #30	Map3k14 (ENSMUSG00000020941) #31	Arhgap27 (ENSMUSG00000034255) #32	Plekhm1 (ENSMUSG00000034247) #33	Lrrc37a (ENSMUSG00000078632)	Gm884 (ENSMUSG00000034239)	Lyzl6 (ENSMUSG00000020945)	Rprml (ENSMUSG00000046215)	Gosr2 (ENSMUSG00000020946)
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000159523 #9	ENSGT00860000135945	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t.t.b	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Steppe mouse	MODERN SPECIES	3424	Gpatch8 (ENSMSIG00000027905) #9	ENSMSIG00000027901	Fzd2 (ENSMSIG00000027898) #10	Meioc (ENSMSIG00000027890) #11	Ccdc43 (ENSMSIG00000027887) #12	Adam11 (ENSMSIG00000027868) #14	Gjc1 (ENSMSIG00000027865) #15	Higd1b (ENSMSIG00000027857) #16	Eftud2 (ENSMSIG00000027830) #17	Ccdc103 (ENSMSIG00000027823) #18	Fam187a (ENSMSIG00000027821) #20	Gfap (ENSMSIG00000027794) #19	Kif18b (ENSMSIG00000027759) #21	C1ql1 (ENSMSIG00000027753) #23	Dcakd (ENSMSIG00000027739) #24	Nmt1 (ENSMSIG00000027729) #22	Plcd3 (ENSMSIG00000027724) #25	ENSMSIG00000027718 #26	Hexim1 (ENSMSIG00000027717) #27	Hexim2 (ENSMSIG00000027714) #28	Fmnl1 (ENSMSIG00000027647) #29	Efcab15 (ENSMSIG00000027599)	Map3k14 (ENSMSIG00000027576) #31	ENSMSIG00000027573	Arhgap27 (ENSMSIG00000027528) #32	Plekhm1 (ENSMSIG00000027518) #33	Gm884 (ENSMSIG00000027443)	Lyzl6 (ENSMSIG00000027426)	Rprml (ENSMSIG00000027425)	Gosr2 (ENSMSIG00000027403)	Wnt9b (ENSMSIG00000027395)
spretus	MODERN SPECIES	2	Gpatch8 (MGP_SPRETEiJ_G0018098) #9	MGP_SPRETEiJ_G0018099	Fzd2 (MGP_SPRETEiJ_G0018100) #10	Meioc (MGP_SPRETEiJ_G0018101) #11	Ccdc43 (MGP_SPRETEiJ_G0018102) #12	Adam11 (MGP_SPRETEiJ_G0018103) #14	Gjc1 (MGP_SPRETEiJ_G0018104) #15	Higd1b (MGP_SPRETEiJ_G0018105) #16	Eftud2 (MGP_SPRETEiJ_G0018106) #17	Ccdc103 (MGP_SPRETEiJ_G0018107) #18	Fam187a (MGP_SPRETEiJ_G0018108) #20	Gfap (MGP_SPRETEiJ_G0018109) #19	Kif18b (MGP_SPRETEiJ_G0018110) #21	C1ql1 (MGP_SPRETEiJ_G0018111) #23	Dcakd (MGP_SPRETEiJ_G0018112) #24	Nmt1 (MGP_SPRETEiJ_G0018113) #22	Plcd3 (MGP_SPRETEiJ_G0018114) #25	Acbd4 (MGP_SPRETEiJ_G0018115) #26	Hexim1 (MGP_SPRETEiJ_G0018116) #27	Hexim2 (MGP_SPRETEiJ_G0018117) #28	Fmnl1 (MGP_SPRETEiJ_G0018118) #29	Efcab15 (MGP_SPRETEiJ_G0018119)	Spata32 (MGP_SPRETEiJ_G0018120) #30	Map3k14 (MGP_SPRETEiJ_G0018121) #31	Arhgap27 (MGP_SPRETEiJ_G0018122) #32	Plekhm1 (MGP_SPRETEiJ_G0018123) #33	MGP_SPRETEiJ_G0018124	Lyzl6 (MGP_SPRETEiJ_G0018125)	Rprml (MGP_SPRETEiJ_G0018126)	Gosr2 (MGP_SPRETEiJ_G0018127)	Wnt9b (MGP_SPRETEiJ_G0018128)
Ryukyu mouse	MODERN SPECIES	2	Gpatch8 (MGP_CAROLIEiJ_G0017255) #9	MGP_CAROLIEiJ_G0017256	Fzd2 (MGP_CAROLIEiJ_G0017257) #10	Meioc (MGP_CAROLIEiJ_G0017258) #11	Ccdc43 (MGP_CAROLIEiJ_G0017259) #12	Adam11 (MGP_CAROLIEiJ_G0017260) #14	Gjc1 (MGP_CAROLIEiJ_G0017261) #15	Higd1b (MGP_CAROLIEiJ_G0017262) #16	Eftud2 (MGP_CAROLIEiJ_G0017263) #17	Ccdc103 (MGP_CAROLIEiJ_G0017264) #18	Fam187a (MGP_CAROLIEiJ_G0017265) #20	Gfap (MGP_CAROLIEiJ_G0017266) #19	Kif18b (MGP_CAROLIEiJ_G0017267) #21	C1ql1 (MGP_CAROLIEiJ_G0017268) #23	Dcakd (MGP_CAROLIEiJ_G0017269) #24	Nmt1 (MGP_CAROLIEiJ_G0017270) #22	Plcd3 (MGP_CAROLIEiJ_G0017271) #25	MGP_CAROLIEiJ_G0017272 #26	Hexim1 (MGP_CAROLIEiJ_G0017273) #27	Hexim2 (MGP_CAROLIEiJ_G0017274) #28	Fmnl1 (MGP_CAROLIEiJ_G0017275) #29	Efcab15 (MGP_CAROLIEiJ_G0017276)	Spata32 (MGP_CAROLIEiJ_G0017277) #30	Map3k14 (MGP_CAROLIEiJ_G0017278) #31	Arhgap27 (MGP_CAROLIEiJ_G0017279) #32	Plekhm1 (MGP_CAROLIEiJ_G0017280) #33	MGP_CAROLIEiJ_G0017281	Lyzl6 (MGP_CAROLIEiJ_G0017282)	Rprml (MGP_CAROLIEiJ_G0017283)	Gosr2 (MGP_CAROLIEiJ_G0017284)	Wnt9b (MGP_CAROLIEiJ_G0017285)
Shrew mouse	MODERN SPECIES	5	Gpatch8 (MGP_PahariEiJ_G0018385) #9	MGP_PahariEiJ_G0018386	Fzd2 (MGP_PahariEiJ_G0018387) #10	Meioc (MGP_PahariEiJ_G0018388) #11	Ccdc43 (MGP_PahariEiJ_G0018389) #12	Adam11 (MGP_PahariEiJ_G0018390) #14	Gjc1 (MGP_PahariEiJ_G0018391) #15	Higd1b (MGP_PahariEiJ_G0018392) #16	Eftud2 (MGP_PahariEiJ_G0018393) #17	MGP_PahariEiJ_G0018394 #18	Fam187a (MGP_PahariEiJ_G0018395) #20	Gfap (MGP_PahariEiJ_G0018396) #19	Kif18b (MGP_PahariEiJ_G0018397) #21	C1ql1 (MGP_PahariEiJ_G0018398) #23	Dcakd (MGP_PahariEiJ_G0018399) #24	Nmt1 (MGP_PahariEiJ_G0018400) #22	Plcd3 (MGP_PahariEiJ_G0018401) #25	MGP_PahariEiJ_G0018402 #26	Hexim1 (MGP_PahariEiJ_G0018403) #27	Hexim2 (MGP_PahariEiJ_G0018404) #28	Fmnl1 (MGP_PahariEiJ_G0018405) #29	Efcab15 (MGP_PahariEiJ_G0018406)	Spata32 (MGP_PahariEiJ_G0018407) #30	Map3k14 (MGP_PahariEiJ_G0018408) #31	Arhgap27 (MGP_PahariEiJ_G0018409) #32	Plekhm1 (MGP_PahariEiJ_G0018410) #33	MGP_PahariEiJ_G0018411	Lyzl6 (MGP_PahariEiJ_G0018412)	Rprml (MGP_PahariEiJ_G0018413)	Gosr2 (MGP_PahariEiJ_G0018414)	Wnt9b (MGP_PahariEiJ_G0018415)
Rat	MODERN SPECIES	1	Itga2b (ENSRNOG00000022071) #8	Gpatch8 (ENSRNOG00000021044) #9	Fzd2 (ENSRNOG00000021962) #10	AABR07030494.1 (ENSRNOG00000049929)	Meioc (ENSRNOG00000021953) #11	Ccdc43 (ENSRNOG00000002748) #12	Adam11 (ENSRNOG00000002753) #14	Gjc1 (ENSRNOG00000048838) #15	Eftud2 (ENSRNOG00000002818) #17	FAM187A (ENSRNOG00000002918) #20	Ccdc103 (ENSRNOG00000002905) #18	Gfap (ENSRNOG00000002919) #19	Kif18b (ENSRNOG00000021713) #21	C1ql1 (ENSRNOG00000002963) #23	Dcakd (ENSRNOG00000021682) #24	Nmt1 (ENSRNOG00000002989) #22	Plcd3 (ENSRNOG00000003033) #25	Acbd4 (ENSRNOG00000003108) #26	Hexim1 (ENSRNOG00000003203) #27	Hexim2 (ENSRNOG00000021287) #28	Fmnl1 (ENSRNOG00000003207) #29	Efcab15 (ENSRNOG00000003266)	Spata32 (ENSRNOG00000003275) #30	Map3k14 (ENSRNOG00000003278) #31	Arhgap27 (ENSRNOG00000028569) #32	Plekhm1 (ENSRNOG00000028521) #33	Lrrc37a (ENSRNOG00000042025)	Prp2l1 (ENSRNOG00000042833)	ENSRNOG00000066876	Lyzl6 (ENSRNOG00000003501)	Rprml (ENSRNOG00000028436)
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00850000133618	ENSGT00940000161546	ENSGT00390000016335	ENSGT00440000034289	ENSGT00940000157020
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Prairie vole	MODERN SPECIES	127	Itga2b (ENSMOCG00000013669) #8	Gpatch8 (ENSMOCG00000001658) #9	Fzd2 (ENSMOCG00000005570) #10	Meioc (ENSMOCG00000012671) #11	ENSMOCG00000020360 #12	Adam11 (ENSMOCG00000016271) #14	Gjc1 (ENSMOCG00000018518) #15	Higd1b (ENSMOCG00000015008) #16	ENSMOCG00000009039 #17	Ccdc103 (ENSMOCG00000017989) #18	Fam187a (ENSMOCG00000004538) #20	Gfap (ENSMOCG00000005063) #19	Kif18b (ENSMOCG00000016572) #21	C1ql1 (ENSMOCG00000014253) #23	Dcakd (ENSMOCG00000011447) #24	Nmt1 (ENSMOCG00000007835) #22	Plcd3 (ENSMOCG00000007577) #25	Acbd4 (ENSMOCG00000015700) #26	Hexim1 (ENSMOCG00000004118) #27	Hexim2 (ENSMOCG00000007400) #28	Fmnl1 (ENSMOCG00000007180) #29	Efcab15 (ENSMOCG00000016330)	Spata32 (ENSMOCG00000010505) #30	Map3k14 (ENSMOCG00000015907) #31	Arhgap27 (ENSMOCG00000022365) #32	Plekhm1 (ENSMOCG00000000541) #33	ENSMOCG00000022014	ENSMOCG00000010708	ENSMOCG00000010891	ENSMOCG00000006953	Vat1 (ENSMOCG00000014418)
Northern American deer mouse	MODERN SPECIES	21	Gpatch8 (ENSPEMG00000008337) #9	Fzd2 (ENSPEMG00000006155) #10	Meioc (ENSPEMG00000000993) #11	Ccdc43 (ENSPEMG00000019168) #12	ENSPEMG00000028527	Adam11 (ENSPEMG00000018436) #14	Gjc1 (ENSPEMG00000016911) #15	Higd1b (ENSPEMG00000024663) #16	Eftud2 (ENSPEMG00000005129) #17	Ccdc103 (ENSPEMG00000016825) #18	Fam187a (ENSPEMG00000014924) #20	Gfap (ENSPEMG00000013799) #19	Kif18b (ENSPEMG00000011429) #21	C1ql1 (ENSPEMG00000010487) #23	Dcakd (ENSPEMG00000025378) #24	Nmt1 (ENSPEMG00000015865) #22	Plcd3 (ENSPEMG00000012702) #25	Acbd4 (ENSPEMG00000007672) #26	Hexim1 (ENSPEMG00000001808) #27	Hexim2 (ENSPEMG00000001356) #28	ENSPEMG00000028730	Fmnl1 (ENSPEMG00000000527) #29	Efcab15 (ENSPEMG00000013521)	Spata32 (ENSPEMG00000012440) #30	Map3k14 (ENSPEMG00000011493) #31	Arhgap27 (ENSPEMG00000008233) #32	Plekhm1 (ENSPEMG00000011753) #33	ENSPEMG00000031209	ENSPEMG00000008544	Lyzl6 (ENSPEMG00000006478)	Rprml (ENSPEMG00000014662)
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00850000133618	ENSGT00940000161546	ENSGT00390000016335	ENSGT00440000034289	ENSGT00940000157020
Golden Hamster	MODERN SPECIES	637	Grn (ENSMAUG00000006858)	Fam171a2 (ENSMAUG00000021377) #7	Itga2b (ENSMAUG00000022208) #8	Gpatch8 (ENSMAUG00000021770) #9	Fzd2 (ENSMAUG00000021965) #10	Meioc (ENSMAUG00000021869) #11	ENSMAUG00000021364 #12	Adam11 (ENSMAUG00000020470) #14	Gjc1 (ENSMAUG00000021729) #15	Higd1b (ENSMAUG00000020566) #16	Eftud2 (ENSMAUG00000021178) #17	Gfap (ENSMAUG00000021806) #19	Kif18b (ENSMAUG00000021609) #21	C1ql1 (ENSMAUG00000021726) #23	Dcakd (ENSMAUG00000021825) #24	Nmt1 (ENSMAUG00000007557) #22	Plcd3 (ENSMAUG00000001235) #25	Acbd4 (ENSMAUG00000021580) #26	Hexim2 (ENSMAUG00000021720) #28	Fmnl1 (ENSMAUG00000022107) #29	Efcab15 (ENSMAUG00000022094)	Spata32 (ENSMAUG00000002535) #30	Map3k14 (ENSMAUG00000006925) #31	ENSMAUG00000008028	ENSMAUG00000001314	Plekhm1 (ENSMAUG00000022022) #33	ENSMAUG00000001260	Tmem106a (ENSMAUG00000021911)	ENSMAUG00000021990	ENSMAUG00000008512	Vat1 (ENSMAUG00000009868)
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	1	Zfp366 (ENSCGRG00001006020)	ENSCGRG00001003516	H2bl1 (ENSCGRG00001007283)	Tnpo1 (ENSCGRG00001016580)	Fcho2 (ENSCGRG00001013782)	Tmem171 (ENSCGRG00001016096)	Tmem174 (ENSCGRG00001011496)	Foxd1 (ENSCGRG00001010743)	Btf3 (ENSCGRG00001009745)	ENSCGRG00001008466	Ankra2 (ENSCGRG00001014449)	Utp15 (ENSCGRG00001013836)	Arhgef28 (ENSCGRG00001018993)	ENSCGRG00001017370	Enc1 (ENSCGRG00001009896)	ENSCGRG00001021658 #22	Hexb (ENSCGRG00001020320)	Gfm2 (ENSCGRG00001022802)	ENSCGRG00001012819	Fam169a (ENSCGRG00001021297)	Gcnt4 (ENSCGRG00001008293)	ENSCGRG00001008489	ENSCGRG00001014554	Ankrd31 (ENSCGRG00001018162)	HMGCR (ENSCGRG00001016870)	Cert1 (ENSCGRG00001020451)	Polk (ENSCGRG00001013007)	ENSCGRG00001012277	Ankdd1b (ENSCGRG00001016471)	Poc5 (ENSCGRG00001015817)	Sv2c (ENSCGRG00001015770)
Chinese hamster chok1gshd	MODERN SPECIES	33	Gpatch8 (ENSCGRG00001020210) #9	Fzd2 (ENSCGRG00001000140) #10	Meioc (ENSCGRG00001021925) #11	Ccdc43 (ENSCGRG00001019235) #12	ENSCGRG00001017817	Adam11 (ENSCGRG00001013003) #14	Gjc1 (ENSCGRG00001008773) #15	Higd1b (ENSCGRG00001000778) #16	Eftud2 (ENSCGRG00001009904) #17	Ccdc103 (ENSCGRG00001000145) #18	Fam187a (ENSCGRG00001010685) #20	Gfap (ENSCGRG00001017134) #19	Kif18b (ENSCGRG00001009629) #21	C1ql1 (ENSCGRG00001005042) #23	Dcakd (ENSCGRG00001022814) #24	Nmt1 (ENSCGRG00001020185) #22	Plcd3 (ENSCGRG00001017565) #25	Acbd4 (ENSCGRG00001021379) #26	Hexim1 (ENSCGRG00001002270) #27	Hexim2 (ENSCGRG00001014831) #28	Fmnl1 (ENSCGRG00001020679) #29	Efcab15 (ENSCGRG00001011868)	Spata32 (ENSCGRG00001008049) #30	Map3k14 (ENSCGRG00001000574) #31	Arhgap27 (ENSCGRG00001010811) #32	Plekhm1 (ENSCGRG00001018850) #33	Ccdc200 (ENSCGRG00001017857)	Tmem106a (ENSCGRG00001011541)	Nbr1 (ENSCGRG00001004155)	Brca1 (ENSCGRG00001013854)	Rnd2 (ENSCGRG00001003167)
Chinese hamster chok1gshd	MODERN SPECIES	101	Tarsl2 (ENSCGRG00001020827)	ENSCGRG00001019466	Tjp1 (ENSCGRG00001006076)	Entrep2 (ENSCGRG00001021998)	Apba2 (ENSCGRG00001018432)	Mcee (ENSCGRG00001014675)	Mphosph10 (ENSCGRG00001008929)	Fan1 (ENSCGRG00001003086)	Mtmr10 (ENSCGRG00001019972)	Trpm1 (ENSCGRG00001014455)	ENSCGRG00001012379	Klf13 (ENSCGRG00001011758)	Cks1brt (ENSCGRG00001022286)	Otud7a (ENSCGRG00001017521)	Chrna7 (ENSCGRG00001013144)	ENSCGRG00001012028 #22	ENSCGRG00001010545	ENSCGRG00001009285	ENSCGRG00001011348	Mkrn3 (ENSCGRG00001010613)	Magel2 (ENSCGRG00001013974)	Ndn (ENSCGRG00001009345)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00960000189914	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009.g #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038.c #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005000644	ENSSVLG00005000626 #13	ENSSVLG00005000608 #13	ENSSVLG00005000580 #14	GJC1 (ENSSVLG00005000568) #15	HIGD1B (ENSSVLG00005000547) #16	EFTUD2 (ENSSVLG00005000481) #17	CCDC103 (ENSSVLG00005000436) #18	ENSSVLG00005000400 #18	FAM187A (ENSSVLG00005000382) #20	ENSSVLG00005000360 #19	ENSSVLG00005000314 #19	KIF18B (ENSSVLG00005000240) #21	C1QL1 (ENSSVLG00005000210) #23	DCAKD (ENSSVLG00005000198) #24	NMT1 (ENSSVLG00005005981) #22	PLCD3 (ENSSVLG00005005888) #25	ACBD4 (ENSSVLG00005005848) #26	HEXIM1 (ENSSVLG00005005826) #27	HEXIM2 (ENSSVLG00005005809) #28	ENSSVLG00005005786	FMNL1 (ENSSVLG00005005614) #29	ENSSVLG00005005505	ENSSVLG00005005472 #30	MAP3K14 (ENSSVLG00005005423) #31	ARHGAP27 (ENSSVLG00005005158) #32	PLEKHM1 (ENSSVLG00005005029) #33	ENSSVLG00005004909	RDM1 (ENSSVLG00005004731)	LYZL6 (ENSSVLG00005004675)	RPRML (ENSSVLG00005004665)
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009.g #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038.c #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Alpin marmot	MODERN SPECIES	42	GPATCH8 (ENSMMMG00000003155) #9	FZD2 (ENSMMMG00000003141) #10	MEIOC (ENSMMMG00000003098) #11	ENSMMMG00000003058 #12	ENSMMMG00000003051	ADAM11 (ENSMMMG00000002933) #14	GJC1 (ENSMMMG00000002917) #15	HIGD1B (ENSMMMG00000002903) #16	EFTUD2 (ENSMMMG00000002775) #17	CCDC103 (ENSMMMG00000002764) #18	FAM187A (ENSMMMG00000002758) #20	GFAP (ENSMMMG00000002725) #19	KIF18B (ENSMMMG00000002688) #21	C1QL1 (ENSMMMG00000002680) #23	DCAKD (ENSMMMG00000002645) #24	NMT1 (ENSMMMG00000002632) #22	PLCD3 (ENSMMMG00000002605) #25	ACBD4 (ENSMMMG00000002555) #26	HEXIM1 (ENSMMMG00000002544) #27	HEXIM2 (ENSMMMG00000002534) #28	FMNL1 (ENSMMMG00000002279) #29	ENSMMMG00000002245 #30	MAP3K14 (ENSMMMG00000002213) #31	ENSMMMG00000001792 #32	ENSMMMG00000001756 #33	ENSMMMG00000001551	ENSMMMG00000001520	LYZL6 (ENSMMMG00000001501)	RPRML (ENSMMMG00000001486)	GOSR2 (ENSMMMG00000001471)	CDK5RAP3 (ENSMMMG00000001404)
Marmotini_b	ANCESTRAL SPECIES	38	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009.g #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038.c #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282.t	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a
Arctic ground squirrel	MODERN SPECIES	379		ENSUPAG00010001931	ENSUPAG00010001914 #12	ENSUPAG00010001907 #13	ENSUPAG00010001892	ADAM11 (ENSUPAG00010001755) #14	GJC1 (ENSUPAG00010001746) #15	HIGD1B (ENSUPAG00010001713) #16	EFTUD2 (ENSUPAG00010001600) #17	CCDC103 (ENSUPAG00010001591) #18	FAM187A (ENSUPAG00010001588) #20	GFAP (ENSUPAG00010001498) #19	KIF18B (ENSUPAG00010001459) #21	C1QL1 (ENSUPAG00010001449) #23	DCAKD (ENSUPAG00010001427) #24	NMT1 (ENSUPAG00010001400) #22	PLCD3 (ENSUPAG00010001368) #25	ACBD4 (ENSUPAG00010001336) #26	HEXIM1 (ENSUPAG00010001331) #27	HEXIM2 (ENSUPAG00010001321) #28	ENSUPAG00010001317	FMNL1 (ENSUPAG00010000986) #29	ENSUPAG00010000920	ENSUPAG00010000909 #30	MAP3K14 (ENSUPAG00010000877) #31	ARHGAP27 (ENSUPAG00010000845) #32	ENSUPAG00010000835 #32	PLEKHM1 (ENSUPAG00010000809) #33	ENSUPAG00010000791	ENSUPAG00010000775	RDM1 (ENSUPAG00010000761)
Squirrel	MODERN SPECIES	141	ITGA2B (ENSSTOG00000004233) #8	GPATCH8 (ENSSTOG00000025022) #9	FZD2 (ENSSTOG00000027061) #10	MEIOC (ENSSTOG00000013666) #11	ENSSTOG00000013668 #12	ADAM11 (ENSSTOG00000023746) #14	GJC1 (ENSSTOG00000013682) #15	HIGD1B (ENSSTOG00000012186) #16	EFTUD2 (ENSSTOG00000012188) #17	CCDC103 (ENSSTOG00000028267) #18	FAM187A (ENSSTOG00000012198) #20	GFAP (ENSSTOG00000027787) #19	KIF18B (ENSSTOG00000007553) #21	C1QL1 (ENSSTOG00000025620) #23	DCAKD (ENSSTOG00000009387) #24	NMT1 (ENSSTOG00000009392) #22	PLCD3 (ENSSTOG00000009418) #25	ACBD4 (ENSSTOG00000009436) #26	HEXIM1 (ENSSTOG00000019464) #27	HEXIM2 (ENSSTOG00000009448) #28	FMNL1 (ENSSTOG00000029149) #29	ENSSTOG00000025914	MAP3K14 (ENSSTOG00000012610) #31	ARHGAP27 (ENSSTOG00000021140) #32	PLEKHM1 (ENSSTOG00000026694) #33	RDM1 (ENSSTOG00000022491)	LYZL6 (ENSSTOG00000022928)	GOSR2 (ENSSTOG00000016069)	WNT9B (ENSSTOG00000027843)	WNT3 (ENSSTOG00000020493)	NSF (ENSSTOG00000020250)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000159523 #9	ENSGT00960000189914	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000159521	ENSGT00950000183080.a.a	ENSGT00940000160653	ENSGT00940000160329	ENSGT00390000016495	ENSGT00950000183019.f.b.a	ENSGT00940000156707	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.b.b.a	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	97	GPATCH8 (ENSODEG00000018121) #9	ENSODEG00000020549	ENSODEG00000018026	FZD2 (ENSODEG00000020558) #10	MEIOC (ENSODEG00000018018) #11	ENSODEG00000018067 #12	ADAM11 (ENSODEG00000018140) #14	GJC1 (ENSODEG00000020541) #15	HIGD1B (ENSODEG00000018046) #16	ENSODEG00000018041 #17	CCDC103 (ENSODEG00000018091) #18	GFAP (ENSODEG00000018068) #19	KIF18B (ENSODEG00000018090) #21	ENSODEG00000018024	DCAKD (ENSODEG00000018054) #24	ENSODEG00000018078 #22	PLCD3 (ENSODEG00000018045) #25	ACBD4 (ENSODEG00000018134) #26	HEXIM1 (ENSODEG00000018098) #27	FMNL1 (ENSODEG00000018088) #29	MAP3K14 (ENSODEG00000017916) #31	ENSODEG00000017987 #32	ENSODEG00000017941	PLEKHM1 (ENSODEG00000018058) #33	ENSODEG00000020476
Degu	MODERN SPECIES	398									ENSODEG00000000070	ENSODEG00000003143	PFKFB1 (ENSODEG00000003122)	ENSODEG00000003095	ENSODEG00000018880	ALAS2 (ENSODEG00000003044)	ENSODEG00000003024	ENSODEG00000003009 #22	RRAGB (ENSODEG00000002951)	ENSODEG00000002914	ENSODEG00000002898
Degu	MODERN SPECIES	46	TACR2 (ENSODEG00000013359)	HK1 (ENSODEG00000013704)	HKDC1 (ENSODEG00000013763)	SUPV3L1 (ENSODEG00000014392)	VPS26A (ENSODEG00000012728)	ENSODEG00000012813	ENSODEG00000013479	ENSODEG00000013123	ENSODEG00000012879	DDX50 (ENSODEG00000014597)	ENSODEG00000012772	ENSODEG00000013170	IPMK (ENSODEG00000012859)	ENSODEG00000015108	ENSODEG00000012789	ENSODEG00000013211 #22	ZWINT (ENSODEG00000013717)	ENSODEG00000020229	PCDH15 (ENSODEG00000013433)	MBL2 (ENSODEG00000013389)	DKK1 (ENSODEG00000012535)	ENSODEG00000012827	CSTF2T (ENSODEG00000012386)	PRKG1 (ENSODEG00000014448)	ENSODEG00000012177	ENSODEG00000014023	ENSODEG00000013960	SGMS1 (ENSODEG00000014772)	ENSODEG00000013144
Long-tailed chinchilla	MODERN SPECIES	158	GRN (ENSCLAG00000015498)	ITGA2B (ENSCLAG00000016572) #8	GPATCH8 (ENSCLAG00000016710) #9	MEIOC (ENSCLAG00000016838) #11	CCDC43 (ENSCLAG00000016525) #12	ADAM11 (ENSCLAG00000015429) #14	GJC1 (ENSCLAG00000016073) #15	EFTUD2 (ENSCLAG00000014733) #17	HIGD1B (ENSCLAG00000016357) #16	CCDC103 (ENSCLAG00000016424) #18	FAM187A (ENSCLAG00000016620) #20	GFAP (ENSCLAG00000016644) #19	KIF18B (ENSCLAG00000016007) #21	ENSCLAG00000016592	DCAKD (ENSCLAG00000016633) #24	NMT1 (ENSCLAG00000016926) #22	PLCD3 (ENSCLAG00000016894) #25	ACBD4 (ENSCLAG00000016891) #26	FMNL1 (ENSCLAG00000016137) #29	MAP3K14 (ENSCLAG00000016893) #31	ARHGAP27 (ENSCLAG00000016731) #32	PLEKHM1 (ENSCLAG00000015679) #33
Guinea pig	MODERN SPECIES	67	GRN (ENSCPOG00000008789)	FAM171A2 (ENSCPOG00000010204) #7	ITGA2B (ENSCPOG00000006801) #8	GPATCH8 (ENSCPOG00000039068) #9	FZD2 (ENSCPOG00000033417) #10	MEIOC (ENSCPOG00000022459) #11	CCDC43 (ENSCPOG00000032545) #12	ADAM11 (ENSCPOG00000001083) #14	GJC1 (ENSCPOG00000030590) #15	HIGD1B (ENSCPOG00000034697) #16	EFTUD2 (ENSCPOG00000010566) #17	CCDC103 (ENSCPOG00000013479) #18	GFAP (ENSCPOG00000020899) #19	C1QL1 (ENSCPOG00000023818) #23	DCAKD (ENSCPOG00000040615) #24	NMT1 (ENSCPOG00000000854) #22	PLCD3 (ENSCPOG00000007126) #25	ACBD4 (ENSCPOG00000034610) #26	HEXIM1 (ENSCPOG00000007132) #27	FMNL1 (ENSCPOG00000024625) #29	MAP3K14 (ENSCPOG00000004839) #31	ARHGAP27 (ENSCPOG00000033813) #32	PLEKHM1 (ENSCPOG00000011348) #33	ENSCPOG00000037249	SAAL1 (ENSCPOG00000006107)	TPH1 (ENSCPOG00000000911)	SERGEF (ENSCPOG00000000907)	KCNC1 (ENSCPOG00000011387)	MYOD1 (ENSCPOG00000021351)	OTOG (ENSCPOG00000002809)	USH1C (ENSCPOG00000001261)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	12	ITGA2B (ENSHGLG00000011773) #8	GPATCH8 (ENSHGLG00000042737) #9	ENSHGLG00000046586	FZD2 (ENSHGLG00000021338) #10	MEIOC (ENSHGLG00000013724) #11	CCDC43 (ENSHGLG00000010178) #12	ADAM11 (ENSHGLG00000012235) #14	GJC1 (ENSHGLG00000011195) #15	ENSHGLG00000013391	EFTUD2 (ENSHGLG00000014497) #17	ENSHGLG00000012252 #18	FAM187A (ENSHGLG00000020801) #20	GFAP (ENSHGLG00000014157) #19	C1QL1 (ENSHGLG00000013928) #23	DCAKD (ENSHGLG00000049718) #24	ENSHGLG00000048005 #22	PLCD3 (ENSHGLG00000015527) #25	ACBD4 (ENSHGLG00000011655) #26	HEXIM1 (ENSHGLG00000042985) #27	FMNL1 (ENSHGLG00000008766) #29	ENSHGLG00000041244	MAP3K14 (ENSHGLG00000011804) #31	ENSHGLG00000048030 #33	ENSHGLG00000042153 #33	METRNL (ENSHGLG00000008392)	ENSHGLG00000012995	TBCD (ENSHGLG00000012612)	ZNF750 (ENSHGLG00000012739)	FN3K (ENSHGLG00000011612)	FN3KRP (ENSHGLG00000034724)	ENSHGLG00000011186
Naked mole-rat female	MODERN SPECIES	8	CAND1 (ENSHGLG00000011243)	ENSHGLG00000046010	GRIP1 (ENSHGLG00000013837)	ENSHGLG00000009070	HELB (ENSHGLG00000015896)	IRAK3 (ENSHGLG00000014145)	TMBIM4 (ENSHGLG00000048285)	ENSHGLG00000047690	HMGA2 (ENSHGLG00000006760)	ENSHGLG00000009103	MSRB3 (ENSHGLG00000050004)	ENSHGLG00000035404	LEMD3 (ENSHGLG00000010766)	ENSHGLG00000039179	WIF1 (ENSHGLG00000011348)	ENSHGLG00000037140 #22	TBC1D30 (ENSHGLG00000038485)	ENSHGLG00000001799	ENSHGLG00000017335	ENSHGLG00000034507	ENSHGLG00000043214	ENSHGLG00000021064	ENSHGLG00000016725	XPOT (ENSHGLG00000005833)	ENSHGLG00000032357	ENSHGLG00000011036	ENSHGLG00000036595	KICS2 (ENSHGLG00000036040)	SRGAP1 (ENSHGLG00000009171)	ENSHGLG00000035246	RXYLT1 (ENSHGLG00000014305)
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Eulipotyphla	ANCESTRAL SPECIES	1953																ENSGT00390000017837.a #22	ENSGT00940000156993 #25
Hedgehog	MODERN SPECIES	3364																NMT1 (ENSEEUG00000006892) #22	ENSEEUG00000007004 #25
Common shrew	MODERN SPECIES	2515																ENSSARG00000006555 #22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Equus	ANCESTRAL SPECIES		ENSGT00960000189914	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Donkey	MODERN SPECIES	4	ENSEASG00005010267	FZD2 (ENSEASG00005024986) #10	ENSEASG00005035837	CCDC43 (ENSEASG00005010273) #12	DBF4B (ENSEASG00005034740) #13	ADAM11 (ENSEASG00005010283) #14	GJC1 (ENSEASG00005025659) #15	EFTUD2 (ENSEASG00005010321) #17	HIGD1B (ENSEASG00005010315) #16	ENSEASG00005010336 #18	FAM187A (ENSEASG00005029603) #20	GFAP (ENSEASG00005010349) #19	KIF18B (ENSEASG00005010368) #21	C1QL1 (ENSEASG00005010395) #23	DCAKD (ENSEASG00005010398) #24	NMT1 (ENSEASG00005010406) #22	PLCD3 (ENSEASG00005010411) #25	ACBD4 (ENSEASG00005010416) #26	HEXIM1 (ENSEASG00005029745) #27	HEXIM2 (ENSEASG00005030441) #28	ENSEASG00005030001 #29	ENSEASG00005010532	ENSEASG00005010533 #30	MAP3K14 (ENSEASG00005010537) #31	ARHGAP27 (ENSEASG00005010540) #32	ENSEASG00005010543 #33	ENSEASG00005010549	ENSEASG00005010555	ENSEASG00005029916	GOSR2 (ENSEASG00005010558)	WNT9B (ENSEASG00005030083)
Horse	MODERN SPECIES	2	FZD2 (ENSECAG00000017678) #10	MEIOC (ENSECAG00000016844) #11	CCDC43 (ENSECAG00000016088) #12	DBF4B (ENSECAG00000015218) #13	ADAM11 (ENSECAG00000023662) #14	GJC1 (ENSECAG00000023629) #15	HIGD1B (ENSECAG00000023226) #16	EFTUD2 (ENSECAG00000019363) #17	CCDC103 (ENSECAG00000016904) #18	FAM187A (ENSECAG00000000941) #20	GFAP (ENSECAG00000010023) #19	KIF18B (ENSECAG00000023019) #21	C1QL1 (ENSECAG00000036729) #23	DCAKD (ENSECAG00000022444) #24	PLCD3 (ENSECAG00000020338) #25	NMT1 (ENSECAG00000013216) #22	ACBD4 (ENSECAG00000018434) #26	HEXIM1 (ENSECAG00000000859) #27	HEXIM2 (ENSECAG00000018388) #28	ENSECAG00000021549	FMNL1 (ENSECAG00000022527) #29	MAP3K14 (ENSECAG00000014800) #31	ARHGAP27 (ENSECAG00000005990) #32	PLEKHM1 (ENSECAG00000025023) #33	ENSECAG00000022453	RDM1 (ENSECAG00000022182)	LYZL6 (ENSECAG00000016574)	RPRML (ENSECAG00000016564)	GOSR2 (ENSECAG00000015214)	WNT9B (ENSECAG00000011600)	WNT3 (ENSECAG00000021759)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Megabat	MODERN SPECIES	2620							ADAM11 (ENSPVAG00000016147) #14	GJC1 (ENSPVAG00000016151) #15	HIGD1B (ENSPVAG00000016153) #16	EFTUD2 (ENSPVAG00000016155) #17	CCDC103 (ENSPVAG00000016157) #18	FAM187A (ENSPVAG00000016158) #20	GFAP (ENSPVAG00000016159) #19	KIF18B (ENSPVAG00000016160) #21	DCAKD (ENSPVAG00000016164) #24	NMT1 (ENSPVAG00000016165) #22	PLCD3 (ENSPVAG00000016166) #25	ENSPVAG00000016168 #26
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Greater horseshoe bat	MODERN SPECIES	13	FZD2 (ENSRFEG00010006008) #10	MEIOC (ENSRFEG00010006036) #11	CCDC43 (ENSRFEG00010006075) #12	ENSRFEG00010006098 #13	ENSRFEG00010006122 #13	ADAM11 (ENSRFEG00010006199) #14	GJC1 (ENSRFEG00010006309) #15	HIGD1B (ENSRFEG00010006327) #16	EFTUD2 (ENSRFEG00010006380) #17	CCDC103 (ENSRFEG00010006555) #18	FAM187A (ENSRFEG00010006586) #20	GFAP (ENSRFEG00010006623) #19	KIF18B (ENSRFEG00010006711) #21	C1QL1 (ENSRFEG00010006758) #23	DCAKD (ENSRFEG00010006797) #24	NMT1 (ENSRFEG00010006862) #22	PLCD3 (ENSRFEG00010006929) #25	ACBD4 (ENSRFEG00010006970) #26	HEXIM1 (ENSRFEG00010007001) #27	HEXIM2 (ENSRFEG00010007016) #28	FMNL1 (ENSRFEG00010007112) #29	ENSRFEG00010007286	ENSRFEG00010007325 #30	MAP3K14 (ENSRFEG00010007409) #31	ARHGAP27 (ENSRFEG00010007487) #32	PLEKHM1 (ENSRFEG00010007577) #33	ENSRFEG00010007696	ENSRFEG00010007825	RPRML (ENSRFEG00010007879)	GOSR2 (ENSRFEG00010007913)	ENSRFEG00010008121
Microbat	MODERN SPECIES	1580														DCAKD (ENSMLUG00000012210) #24	ENSMLUG00000029741	NMT1 (ENSMLUG00000014715) #22	PLCD3 (ENSMLUG00000000073) #25	ACBD4 (ENSMLUG00000013336) #26	HEXIM1 (ENSMLUG00000005554) #27	HEXIM2 (ENSMLUG00000005556) #28	FMNL1 (ENSMLUG00000005560) #29	ENSMLUG00000005574 #30	MAP3K14 (ENSMLUG00000005592) #31	ARHGAP27 (ENSMLUG00000005603) #32	PLEKHM1 (ENSMLUG00000005612) #33	ENSMLUG00000023696
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.b	ENSGT00940000161690.f	ENSGT00390000010523.c.a
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.a	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.x #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.b
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a.kb #32	ENSGT00940000155111.x #33	ENSGT00530000063282.xb.b	ENSGT00940000161690.e.b.a.b
Dog	MODERN SPECIES	37	FZD2 (ENSCAFG00845007799) #10	MEIOC (ENSCAFG00845007713) #11	CCDC43 (ENSCAFG00845007635) #12	ENSCAFG00845007612 #13	ENSCAFG00845007574 #13	ADAM11 (ENSCAFG00845007311) #14	GJC1 (ENSCAFG00845007216) #15	HIGD1B (ENSCAFG00845007171) #16	EFTUD2 (ENSCAFG00845006798) #17	CCDC103 (ENSCAFG00845006520) #18	FAM187A (ENSCAFG00845006495) #20	GFAP (ENSCAFG00845006442) #19	KIF18B (ENSCAFG00845006392) #21	C1QL1 (ENSCAFG00845006376) #23	DCAKD (ENSCAFG00845006360) #24	NMT1 (ENSCAFG00845006316) #22	PLCD3 (ENSCAFG00845006236) #25	ACBD4 (ENSCAFG00845006180) #26	HEXIM2 (ENSCAFG00845006135) #28	FMNL1 (ENSCAFG00845005962) #29	ENSCAFG00845005878	ENSCAFG00845005848 #30	MAP3K14 (ENSCAFG00845005731) #31	ENSCAFG00845005625 #32	ENSCAFG00845005563 #33	ENSCAFG00845005502	ENSCAFG00845005477	ENSCAFG00845005471	ENSCAFG00845005468	ENSCAFG00845005460	KCNJ2 (ENSCAFG00845005439)
Dingo	MODERN SPECIES	150	MEIOC (ENSCAFG00020009804) #11	CCDC43 (ENSCAFG00020009792) #12	ENSCAFG00020009786 #13	ENSCAFG00020009783 #13	ADAM11 (ENSCAFG00020009690) #14	GJC1 (ENSCAFG00020009678) #15	ENSCAFG00020009673	HIGD1B (ENSCAFG00020009669) #16	EFTUD2 (ENSCAFG00020009633) #17	ENSCAFG00020009628 #18	FAM187A (ENSCAFG00020009627) #20	GFAP (ENSCAFG00020009596) #19	KIF18B (ENSCAFG00020009581) #21	C1QL1 (ENSCAFG00020009572) #23	DCAKD (ENSCAFG00020009570) #24	NMT1 (ENSCAFG00020009565) #22	PLCD3 (ENSCAFG00020009532) #25	ACBD4 (ENSCAFG00020009525) #26	HEXIM1 (ENSCAFG00020009524) #27	HEXIM2 (ENSCAFG00020009518) #28	FMNL1 (ENSCAFG00020005840) #29	ENSCAFG00020005709	MAP3K14 (ENSCAFG00020005696) #31
Red fox	MODERN SPECIES	237	GPATCH8 (ENSVVUG00000017996) #9	FZD2 (ENSVVUG00000018007) #10	MEIOC (ENSVVUG00000018011) #11	CCDC43 (ENSVVUG00000018017) #12	DBF4B (ENSVVUG00000018022) #13	ADAM11 (ENSVVUG00000018038) #14	ENSVVUG00000018099	HIGD1B (ENSVVUG00000018101) #16	EFTUD2 (ENSVVUG00000018113) #17	ENSVVUG00000018123 #18	GFAP (ENSVVUG00000018129) #19	FAM187A (ENSVVUG00000018235) #20	KIF18B (ENSVVUG00000018237) #21	C1QL1 (ENSVVUG00000018239) #23	DCAKD (ENSVVUG00000018243) #24	NMT1 (ENSVVUG00000018246) #22	PLCD3 (ENSVVUG00000018257) #25	ACBD4 (ENSVVUG00000018315) #26	HEXIM1 (ENSVVUG00000018324) #27	FMNL1 (ENSVVUG00000018330) #29	HEXIM2 (ENSVVUG00000018357) #28	ENSVVUG00000018361	ENSVVUG00000018392 #30	MAP3K14 (ENSVVUG00000018399) #31	ARHGAP27 (ENSVVUG00000018425) #32
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.a	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Ferret	MODERN SPECIES	336	ITGA2B (ENSMPUG00000009285) #8	GPATCH8 (ENSMPUG00000009274) #9	FZD2 (ENSMPUG00000019048) #10	MEIOC (ENSMPUG00000009257) #11	CCDC43 (ENSMPUG00000009224) #12	ENSMPUG00000009199 #13	ADAM11 (ENSMPUG00000009173) #14	HIGD1B (ENSMPUG00000009155) #16	EFTUD2 (ENSMPUG00000009136) #17	CCDC103 (ENSMPUG00000009111) #18	FAM187A (ENSMPUG00000019046) #20	GFAP (ENSMPUG00000008874) #19	KIF18B (ENSMPUG00000008866) #21	C1QL1 (ENSMPUG00000008823) #23	DCAKD (ENSMPUG00000008817) #24	NMT1 (ENSMPUG00000008810) #22	PLCD3 (ENSMPUG00000008709) #25	ACBD4 (ENSMPUG00000008660) #26	HEXIM1 (ENSMPUG00000019044) #27	HEXIM2 (ENSMPUG00000008646) #28	FMNL1 (ENSMPUG00000008624) #29	ENSMPUG00000008618	ENSMPUG00000008596 #30	MAP3K14 (ENSMPUG00000008584) #31	ARHGAP27 (ENSMPUG00000008429) #32	PLEKHM1 (ENSMPUG00000008417) #33	ENSMPUG00000008411	ENSMPUG00000008409	ENSMPUG00000019042	RDM1 (ENSMPUG00000008363)	LYZL6 (ENSMPUG00000008354)
American mink	MODERN SPECIES	180						CXG1 (ENSNVIG00000022743) #15	HIG1B (ENSNVIG00000022744) #16	U5S1 (ENSNVIG00000022751) #17	ENSNVIG00000022766	CCDC103 (ENSNVIG00000022768) #18	FAM187A (ENSNVIG00000022773) #20	GFAP (ENSNVIG00000022774) #19	ENSNVIG00000022779	C1QL1 (ENSNVIG00000022784) #23	DCAKD (ENSNVIG00000022788) #24	NMT1 (ENSNVIG00000022794) #22	PLCD3 (ENSNVIG00000022795) #25	ACBD4 (ENSNVIG00000022800) #26	HEXIM1 (ENSNVIG00000022816) #27	HEXIM2 (ENSNVIG00000022818) #28	FMNL1 (ENSNVIG00000022822) #29	ENSNVIG00000022864 #30	MAP3K14 (ENSNVIG00000022867) #31	ARHGAP27 (ENSNVIG00000022874) #32	ENSNVIG00000022878 #32	PLEKHM1 (ENSNVIG00000022881) #33	ENSNVIG00000022887	ENSNVIG00000022918	RDM1 (ENSNVIG00000022923)	LYZL6 (ENSNVIG00000022936)	GOSR2 (ENSNVIG00000022940)
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.y #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.a	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Giant Panda	MODERN SPECIES	4	GPATCH8 (ENSAMEG00000018376) #9	FZD2 (ENSAMEG00000018377) #10	MEIOC (ENSAMEG00000026200) #11	CCDC43 (ENSAMEG00000018379) #12	ENSAMEG00000018380 #13	ADAM11 (ENSAMEG00000018382) #14	GJC1 (ENSAMEG00000019925) #15	HIGD1B (ENSAMEG00000018389) #16	EFTUD2 (ENSAMEG00000018390) #17	CCDC103 (ENSAMEG00000018392) #18	FAM187A (ENSAMEG00000019932) #20	GFAP (ENSAMEG00000018393) #19	KIF18B (ENSAMEG00000018397) #21	C1QL1 (ENSAMEG00000027167) #23	DCAKD (ENSAMEG00000027390) #24	NMT1 (ENSAMEG00000018400) #22	PLCD3 (ENSAMEG00000018398) #25	ACBD4 (ENSAMEG00000018403) #26	HEXIM1 (ENSAMEG00000019935) #27	HEXIM2 (ENSAMEG00000018404) #28	FMNL1 (ENSAMEG00000018405) #29	MAP3K14 (ENSAMEG00000018412) #31	ARHGAP27 (ENSAMEG00000018413) #32	ENSAMEG00000018414 #33	ENSAMEG00000024492	GOSR2 (ENSAMEG00000004285)	WNT9B (ENSAMEG00000004271)	WNT3 (ENSAMEG00000016308)	NSF (ENSAMEG00000004199)	ENSAMEG00000027960	ENSAMEG00000027161 #36
Ursus	ANCESTRAL SPECIES	2	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00990000205467	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.y #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690.e.a	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
American black bear	MODERN SPECIES	2023																NMT1 (ENSUAMG00000024055) #22	PLCD3 (ENSUAMG00000024045) #25	ACBD4 (ENSUAMG00000024044) #26	HEXIM1 (ENSUAMG00000024043) #27	HEXIM2 (ENSUAMG00000024042) #28	FMNL1 (ENSUAMG00000023607) #29	ENSUAMG00000023606	ENSUAMG00000023605 #30	MAP3K14 (ENSUAMG00000023587) #31
Polar bear	MODERN SPECIES	185	GPATCH8 (ENSUMAG00000013891) #9	MEIOC (ENSUMAG00000013906) #11	CCDC43 (ENSUMAG00000013923) #12	ENSUMAG00000013930	ENSUMAG00000013931 #13	ENSUMAG00000013938	ADAM11 (ENSUMAG00000013994) #14	GJC1 (ENSUMAG00000014315) #15	HIGD1B (ENSUMAG00000014319) #16	EFTUD2 (ENSUMAG00000014323) #17	CCDC103 (ENSUMAG00000014328) #18	GFAP (ENSUMAG00000014332) #19	FAM187A (ENSUMAG00000014353) #20	KIF18B (ENSUMAG00000014357) #21	DCAKD (ENSUMAG00000014365) #24	NMT1 (ENSUMAG00000014384) #22	PLCD3 (ENSUMAG00000014451) #25	ACBD4 (ENSUMAG00000014470) #26	HEXIM1 (ENSUMAG00000014477) #27	HEXIM2 (ENSUMAG00000014481) #28	FMNL1 (ENSUMAG00000014569) #29	ENSUMAG00000015171 #30	MAP3K14 (ENSUMAG00000015180) #31	ENSUMAG00000015245 #32	PLEKHM1 (ENSUMAG00000015300) #33	ENSUMAG00000015346	RDM1 (ENSUMAG00000015423)	ENSUMAG00000015427	GOSR2 (ENSUMAG00000015432)	WNT9B (ENSUMAG00000015442)	ENSUMAG00000015463
Felidae	ANCESTRAL SPECIES	8	ENSGT00390000010130.h	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00390000010523.c.a	ENSGT00940000161690.e.a	ENSGT00950000183192.a.b
Panthera	ANCESTRAL SPECIES	45	ENSGT00390000010130.h	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33
Tiger	MODERN SPECIES	442	ENSPTIG00000020465	FZD2 (ENSPTIG00000000057) #10	MEIOC (ENSPTIG00000020634) #11	CCDC43 (ENSPTIG00000000360) #12	DBF4B (ENSPTIG00000003016) #13	ADAM11 (ENSPTIG00000005079) #14	GJC1 (ENSPTIG00000000279) #15	HIGD1B (ENSPTIG00000007136) #16	EFTUD2 (ENSPTIG00000007703) #17	CCDC103 (ENSPTIG00000010310) #18	FAM187A (ENSPTIG00000000473) #20	GFAP (ENSPTIG00000010863) #19	KIF18B (ENSPTIG00000012505) #21	C1QL1 (ENSPTIG00000014266) #23	DCAKD (ENSPTIG00000014466) #24	NMT1 (ENSPTIG00000015135) #22	PLCD3 (ENSPTIG00000015774) #25	ACBD4 (ENSPTIG00000016304) #26	HEXIM1 (ENSPTIG00000001145) #27	HEXIM2 (ENSPTIG00000019231) #28	FMNL1 (ENSPTIG00000019405) #29	ENSPTIG00000004050	ENSPTIG00000005914 #31	ENSPTIG00000006769 #32	PLEKHM1 (ENSPTIG00000007432) #33
Panthera_a	ANCESTRAL SPECIES	52	ENSGT00390000010130.h	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.ab #33
leopard	MODERN SPECIES	170	ENSPPRG00000023678	FZD2 (ENSPPRG00000022301) #10	MEIOC (ENSPPRG00000023838) #11	CCDC43 (ENSPPRG00000022589) #12	DBF4B (ENSPPRG00000019593) #13	ADAM11 (ENSPPRG00000016775) #14	GJC1 (ENSPPRG00000022149) #15	HIGD1B (ENSPPRG00000011151) #16	EFTUD2 (ENSPPRG00000010981) #17	CCDC103 (ENSPPRG00000007316) #18	FAM187A (ENSPPRG00000021962) #20	GFAP (ENSPPRG00000006948) #19	KIF18B (ENSPPRG00000006104) #21	C1QL1 (ENSPPRG00000005128) #23	DCAKD (ENSPPRG00000004982) #24	NMT1 (ENSPPRG00000004687) #22	PLCD3 (ENSPPRG00000004265) #25	ACBD4 (ENSPPRG00000004189) #26	HEXIM1 (ENSPPRG00000021693) #27	HEXIM2 (ENSPPRG00000001652) #28	FMNL1 (ENSPPRG00000000998) #29	ENSPPRG00000023000	ENSPPRG00000023320 #31	ENSPPRG00000017472 #33
lion	MODERN SPECIES	14	ENSPLOG00000013601	FZD2 (ENSPLOG00000013640) #10	MEIOC (ENSPLOG00000013663) #11	CCDC43 (ENSPLOG00000013736) #12	ENSPLOG00000013771 #13	ADAM11 (ENSPLOG00000013808) #14	GJC1 (ENSPLOG00000014232) #15	EFTUD2 (ENSPLOG00000014277) #17	HIGD1B (ENSPLOG00000014577) #16	CCDC103 (ENSPLOG00000014643) #18	FAM187A (ENSPLOG00000014726) #20	GFAP (ENSPLOG00000007601) #19	KIF18B (ENSPLOG00000007725) #21	C1QL1 (ENSPLOG00000007810) #23	DCAKD (ENSPLOG00000007842) #24	NMT1 (ENSPLOG00000007883) #22	PLCD3 (ENSPLOG00000007933) #25	ACBD4 (ENSPLOG00000008026) #26	HEXIM1 (ENSPLOG00000008079) #27	HEXIM2 (ENSPLOG00000008093) #28	FMNL1 (ENSPLOG00000008150) #29	ENSPLOG00000008408	ENSPLOG00000008481 #30	MAP3K14 (ENSPLOG00000008551) #31	ARHGAP27 (ENSPLOG00000008635) #32	ENSPLOG00000008746 #33	ATP2A3 (ENSPLOG00000008825)	P2RX1 (ENSPLOG00000008889)	CAMKK1 (ENSPLOG00000008988)	NCBP3 (ENSPLOG00000009061)	ITGAE (ENSPLOG00000009205)
Cat	MODERN SPECIES	245	FZD2 (ENSFCAG00000025050) #10	MEIOC (ENSFCAG00000031826) #11	CCDC43 (ENSFCAG00000005462) #12	ENSFCAG00000050810 #13	ENSFCAG00000023490 #13	ADAM11 (ENSFCAG00000005464) #14	GJC1 (ENSFCAG00000028268) #15	EFTUD2 (ENSFCAG00000005466) #17	HIGD1B (ENSFCAG00000005465) #16	CCDC103 (ENSFCAG00000019288) #18	FAM187A (ENSFCAG00000005467) #20	GFAP (ENSFCAG00000005468) #19	KIF18B (ENSFCAG00000005470) #21	C1QL1 (ENSFCAG00000041275) #23	DCAKD (ENSFCAG00000023984) #24	NMT1 (ENSFCAG00000005472) #22	PLCD3 (ENSFCAG00000005473) #25	ACBD4 (ENSFCAG00000005474) #26	HEXIM1 (ENSFCAG00000005475) #27	HEXIM2 (ENSFCAG00000026386) #28	FMNL1 (ENSFCAG00000000797) #29	ENSFCAG00000022158	ENSFCAG00000049373 #30	MAP3K14 (ENSFCAG00000013850) #31	ARHGAP27 (ENSFCAG00000007907) #32	PLEKHM1 (ENSFCAG00000035468) #33	ENSFCAG00000046953	ENSFCAG00000046546	ENSFCAG00000051188	ENSFCAG00000053238	ENSFCAG00000043429
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00390000010523.c.a	ENSGT00940000161690	ENSGT00950000183192.a.b
Camelidae	ANCESTRAL SPECIES	62	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33
Arabian camel	MODERN SPECIES	7	GPATCH8 (ENSCDRG00005003876) #9	FZD2 (ENSCDRG00005003921) #10	MEIOC (ENSCDRG00005003935) #11	CCDC43 (ENSCDRG00005003986) #12	DBF4B (ENSCDRG00005004028) #13	ADAM11 (ENSCDRG00005004070) #14	GJC1 (ENSCDRG00005004216) #15	EFTUD2 (ENSCDRG00005004242) #17	HIGD1B (ENSCDRG00005004414) #16	CCDC103 (ENSCDRG00005004456) #18	FAM187A (ENSCDRG00005004478) #20	GFAP (ENSCDRG00005004495) #19	KIF18B (ENSCDRG00005004591) #21	ENSCDRG00005004722	DCAKD (ENSCDRG00005004748) #24	NMT1 (ENSCDRG00005004784) #22	PLCD3 (ENSCDRG00005004860) #25	ACBD4 (ENSCDRG00005004928) #26	HEXIM1 (ENSCDRG00005005024) #27	HEXIM2 (ENSCDRG00005005029) #28	FMNL1 (ENSCDRG00005005080) #29	ENSCDRG00005006095 #30	MAP3K14 (ENSCDRG00005006138) #31	ARHGAP27 (ENSCDRG00005006198) #32	ENSCDRG00005006443 #32	PLEKHM1 (ENSCDRG00005006478) #33	ENSCDRG00005006554	RAP1GAP2 (ENSCDRG00005006722)	CCDC92B (ENSCDRG00005007940)	CLUH (ENSCDRG00005008015)	PAFAH1B1 (ENSCDRG00005008204)
Alpaca	MODERN SPECIES	1334															ENSVPAG00000005516 #24	ENSVPAG00000005517 #22	ACBD4 (ENSVPAG00000005520) #26
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT01060000248983	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000005052.q.b
Blue whale	MODERN SPECIES	12	CCDC43 (ENSBMSG00010016721) #12	ENSBMSG00010016746	ENSBMSG00010016774	ENSBMSG00010016800 #13	ADAM11 (ENSBMSG00010016839) #14	GJC1 (ENSBMSG00010016987) #15	HIGD1B (ENSBMSG00010017001) #16	EFTUD2 (ENSBMSG00010017042) #17	CCDC103 (ENSBMSG00010017211) #18	GFAP (ENSBMSG00010017270) #19	FAM187A (ENSBMSG00010017582) #20	KIF18B (ENSBMSG00010017615) #21	C1QL1 (ENSBMSG00010017773) #23	ENSBMSG00010017794	DCAKD (ENSBMSG00010017816) #24	NMT1 (ENSBMSG00010017846) #22	PLCD3 (ENSBMSG00010017874) #25	ACBD4 (ENSBMSG00010017896) #26	HEXIM1 (ENSBMSG00010017902) #27	HEXIM2 (ENSBMSG00010017910) #28	FMNL1 (ENSBMSG00010017931) #29	ENSBMSG00010018050	ENSBMSG00010018079 #30	MAP3K14 (ENSBMSG00010018112) #31	PLEKHM1 (ENSBMSG00010018204) #33	ENSBMSG00010018561	UTP18 (ENSBMSG00010018585)	MBTD1 (ENSBMSG00010018624)	NME2 (ENSBMSG00010018643)	NME1 (ENSBMSG00010018679)	ENSBMSG00010018699
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00860000135559	ENSGT00530000063282.pb.a	ENSGT00940000161690	ENSGT00390000005052.q.b	ENSGT00390000010523.c.a
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397.f	ENSGT00530000063282.pb.a.b.a	ENSGT00390000018397.e.a	ENSGT00940000161690	ENSGT00390000005052.q.b
Dolphin	MODERN SPECIES	283								HIGD1B (ENSTTRG00000006197) #16	EFTUD2 (ENSTTRG00000006230) #17	CCDC103 (ENSTTRG00000006241) #18	FAM187A (ENSTTRG00000006245) #20	GFAP (ENSTTRG00000006246) #19	KIF18B (ENSTTRG00000006254) #21	C1QL1 (ENSTTRG00000006265) #23	DCAKD (ENSTTRG00000006267) #24	NMT1 (ENSTTRG00000006270) #22	PLCD3 (ENSTTRG00000006273) #25	ACBD4 (ENSTTRG00000006276) #26	HEXIM2 (ENSTTRG00000006285) #28	FMNL1 (ENSTTRG00000006287) #29	ENSTTRG00000006291 #30	MAP3K14 (ENSTTRG00000006292) #31
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397.e.a	ENSGT00530000063282.pb.a.b.a	ENSGT00390000018397.f	ENSGT00940000161690	ENSGT00390000005052.q.b
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00950000182901.a.a.b.b.a.b.a.b.a.b.b	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397.e.a	ENSGT00530000063282.pb.a.b.a	ENSGT00940000161690	ENSGT00390000005052.q.b	ENSGT00390000010523.c.a
Beluga whale	MODERN SPECIES	26	GPATCH8 (ENSDLEG00000007207) #9	FZD2 (ENSDLEG00000007192) #10	MEIOC (ENSDLEG00000007178) #11	CCDC43 (ENSDLEG00000007169) #12	DBF4B (ENSDLEG00000007135) #13	ADAM11 (ENSDLEG00000006818) #14	GJC1 (ENSDLEG00000006759) #15	ENSDLEG00000006750 #16	EFTUD2 (ENSDLEG00000006728) #17	CCDC103 (ENSDLEG00000006721) #18	FAM187A (ENSDLEG00000006717) #20	GFAP (ENSDLEG00000006707) #19	KIF18B (ENSDLEG00000006664) #21	C1QL1 (ENSDLEG00000006656) #23	DCAKD (ENSDLEG00000006653) #24	NMT1 (ENSDLEG00000006646) #22	PLCD3 (ENSDLEG00000006629) #25	ACBD4 (ENSDLEG00000006603) #26	HEXIM1 (ENSDLEG00000006599) #27	HEXIM2 (ENSDLEG00000006595) #28	FMNL1 (ENSDLEG00000006567) #29	ENSDLEG00000006559	ENSDLEG00000006550 #30	MAP3K14 (ENSDLEG00000006535) #31	ARHGAP27 (ENSDLEG00000006515) #32	PLEKHM1 (ENSDLEG00000006504) #33
Narwhal	MODERN SPECIES	316	ENSMMNG00015016742	FZD2 (ENSMMNG00015016786) #10	MEIOC (ENSMMNG00015016806) #11	CCDC43 (ENSMMNG00015016844) #12	ENSMMNG00015016865	DBF4B (ENSMMNG00015016893) #13	ADAM11 (ENSMMNG00015016940) #14	HIGD1B (ENSMMNG00015017087) #16	EFTUD2 (ENSMMNG00015017141) #17	CCDC103 (ENSMMNG00015017264) #18	GFAP (ENSMMNG00015017326) #19	FAM187A (ENSMMNG00015017487) #20	KIF18B (ENSMMNG00015017504) #21	C1QL1 (ENSMMNG00015017536) #23	DCAKD (ENSMMNG00015017556) #24	NMT1 (ENSMMNG00015017589) #22	PLCD3 (ENSMMNG00015017633) #25	ACBD4 (ENSMMNG00015017699) #26	HEXIM1 (ENSMMNG00015017779) #27	HEXIM2 (ENSMMNG00015017790) #28	FMNL1 (ENSMMNG00015017834) #29	ENSMMNG00015017917	ENSMMNG00015017955 #30	MAP3K14 (ENSMMNG00015017996) #31	ARHGAP27 (ENSMMNG00015018054) #32	PLEKHM1 (ENSMMNG00015018176) #33	ENSMMNG00015018221	ENSMMNG00015018300	LYZL6 (ENSMMNG00015018395)	ENSMMNG00015018417	RPRML (ENSMMNG00015018423)
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	34	ENSPSNG00000014914	ENSPSNG00000014799	MAGED1 (ENSPSNG00000014702)	GSPT2 (ENSPSNG00000014658)	ENSPSNG00000014642	ENSPSNG00000014613	ENSPSNG00000014522	ENSPSNG00000014492	BMP15 (ENSPSNG00000014443)	ENSPSNG00000014387	SHROOM4 (ENSPSNG00000014309)	DGKK (ENSPSNG00000013923)	CCNB3 (ENSPSNG00000013841)	AKAP4 (ENSPSNG00000013674)	ENSPSNG00000013583	ENSPSNG00000013438 #22	ENSPSNG00000013401	CLCN5 (ENSPSNG00000022408)	USP27X (ENSPSNG00000022400)	PAGE4 (ENSPSNG00000022396)	ENSPSNG00000022391	PPP1R3F (ENSPSNG00000022388)	FOXP3 (ENSPSNG00000022372)	CCDC22 (ENSPSNG00000022356)	CACNA1F (ENSPSNG00000022325)	SYP (ENSPSNG00000022310)	PRICKLE3 (ENSPSNG00000022303)	PLP2 (ENSPSNG00000022296)	MAGIX (ENSPSNG00000022275)	ENSPSNG00000022263	ENSPSNG00000022259
Vaquita	MODERN SPECIES	12	FZD2 (ENSPSNG00000018559) #10	MEIOC (ENSPSNG00000018590) #11	CCDC43 (ENSPSNG00000018674) #12	ENSPSNG00000018785 #13	ENSPSNG00000018832 #13	ADAM11 (ENSPSNG00000018875) #14	GJC1 (ENSPSNG00000019194) #15	HIGD1B (ENSPSNG00000019217) #16	EFTUD2 (ENSPSNG00000019269) #17	CCDC103 (ENSPSNG00000019503) #18	GFAP (ENSPSNG00000019637) #19	FAM187A (ENSPSNG00000019866) #20	KIF18B (ENSPSNG00000019887) #21	C1QL1 (ENSPSNG00000019932) #23	DCAKD (ENSPSNG00000019953) #24	NMT1 (ENSPSNG00000019977) #22	PLCD3 (ENSPSNG00000020044) #25	ACBD4 (ENSPSNG00000020225) #26	HEXIM1 (ENSPSNG00000020264) #27	HEXIM2 (ENSPSNG00000020285) #28	FMNL1 (ENSPSNG00000020350) #29	ENSPSNG00000020501	MAP3K14 (ENSPSNG00000020562) #31	ARHGAP27 (ENSPSNG00000020615) #32	PLEKHM1 (ENSPSNG00000020792) #33	ENSPSNG00000020835	ENSPSNG00000020879	ENSPSNG00000020911	LYZL6 (ENSPSNG00000020984)	ENSPSNG00000021021	RPRML (ENSPSNG00000021030)
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	13	FUNDC1 (ENSPCTG00005021049)	ENSPCTG00005021071	DUSP21 (ENSPCTG00005021077)	KDM6A (ENSPCTG00005021226)	DIPK2B (ENSPCTG00005022166)	ENSPCTG00005022173	ENSPCTG00005022179	MAGED1 (ENSPCTG00005022188)	GSPT2 (ENSPCTG00005022197)	ENSPCTG00005022201	BMP15 (ENSPCTG00005022207)	SHROOM4 (ENSPCTG00005022209)	DGKK (ENSPCTG00005022216)	ENSPCTG00005022233	ENSPCTG00005022242	ENSPCTG00005022245 #22	ENSPCTG00005022249	ENSPCTG00005022254	ENSPCTG00005022256	CLCN5 (ENSPCTG00005022262)	USP27X (ENSPCTG00005004502)	PAGE4 (ENSPCTG00005004518)	ENSPCTG00005004566	PPP1R3F (ENSPCTG00005004594)	FOXP3 (ENSPCTG00005004681)	CCDC22 (ENSPCTG00005005151)	CACNA1F (ENSPCTG00005005273)	ENSPCTG00005005705	ENSPCTG00005005724	GPKOW (ENSPCTG00005005740)	ENSPCTG00005005778
Sperm whale	MODERN SPECIES	5	MPP3 (ENSPCTG00005012528)	ENSPCTG00005012730	PPY (ENSPCTG00005012817)	PYY (ENSPCTG00005012879)	NAGS (ENSPCTG00005012947)	TMEM101 (ENSPCTG00005013059)	LSM12 (ENSPCTG00005013114)	ENSPCTG00005013159	FZD2 (ENSPCTG00005013245) #10	MEIOC (ENSPCTG00005013276) #11	CCDC43 (ENSPCTG00005013432) #12	ENSPCTG00005013488	ENSPCTG00005013531 #13	GJC1 (ENSPCTG00005013618) #15	ENSPCTG00005013638	ENSPCTG00005013704 #22	PLCD3 (ENSPCTG00005013889) #25	ACBD4 (ENSPCTG00005014101) #26	HEXIM1 (ENSPCTG00005014214) #27	HEXIM2 (ENSPCTG00005014229) #28	FMNL1 (ENSPCTG00005014270) #29	ENSPCTG00005014766	ENSPCTG00005014846 #30	MAP3K14 (ENSPCTG00005014939) #31	ARHGAP27 (ENSPCTG00005014993) #32	ENSPCTG00005015310	RDM1 (ENSPCTG00005015356)	LYZL6 (ENSPCTG00005015532)	ENSPCTG00005015570	RPRML (ENSPCTG00005015584)	GOSR2 (ENSPCTG00005015631)
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Yarkand deer	MODERN SPECIES	28	FZD2 (ENSCHYG00000001602) #10	MEIOC (ENSCHYG00000001658) #11	ENSCHYG00000001685 #12	ENSCHYG00000001714 #13	ADAM11 (ENSCHYG00000001812) #14	GJC1 (ENSCHYG00000001911) #15	HIGD1B (ENSCHYG00000001928) #16	EFTUD2 (ENSCHYG00000001998) #17	CCDC103 (ENSCHYG00000002232) #18	FAM187A (ENSCHYG00000002248) #20	GFAP (ENSCHYG00000002279) #19	KIF18B (ENSCHYG00000002344) #21	C1QL1 (ENSCHYG00000002385) #23	DCAKD (ENSCHYG00000002398) #24	ENSCHYG00000002409	NMT1 (ENSCHYG00000002431) #22	PLCD3 (ENSCHYG00000002473) #25	ACBD4 (ENSCHYG00000002516) #26	HEXIM1 (ENSCHYG00000002569) #27	HEXIM2 (ENSCHYG00000002582) #28	FMNL1 (ENSCHYG00000002636) #29	ENSCHYG00000002787	ENSCHYG00000002817 #30	MAP3K14 (ENSCHYG00000002833) #31	ARHGAP27 (ENSCHYG00000002921) #32	PLEKHM1 (ENSCHYG00000003067) #33	ENSCHYG00000003085	ENSCHYG00000003096	RDM1 (ENSCHYG00000003124)	ENSCHYG00000003167	RPRML (ENSCHYG00000003181)
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Siberian musk deer	MODERN SPECIES	1210	ENSMMSG00000020526	FZD2 (ENSMMSG00000020546) #10	MEIOC (ENSMMSG00000020556) #11	CCDC43 (ENSMMSG00000020608) #12	DBF4B (ENSMMSG00000020639) #13	ADAM11 (ENSMMSG00000020730) #14	GJC1 (ENSMMSG00000020913) #15	HIGD1B (ENSMMSG00000020925) #16	EFTUD2 (ENSMMSG00000020958) #17	CCDC103 (ENSMMSG00000021102) #18	FAM187A (ENSMMSG00000021130) #20	GFAP (ENSMMSG00000021152) #19	KIF18B (ENSMMSG00000021228) #21	C1QL1 (ENSMMSG00000021263) #23	DCAKD (ENSMMSG00000021283) #24	NMT1 (ENSMMSG00000021307) #22	PLCD3 (ENSMMSG00000021357) #25	ACBD4 (ENSMMSG00000021445) #26	HEXIM1 (ENSMMSG00000021475) #27	HEXIM2 (ENSMMSG00000021492) #28	FMNL1 (ENSMMSG00000021527) #29	ENSMMSG00000021569	ENSMMSG00000021582 #30	MAP3K14 (ENSMMSG00000021598) #31	ARHGAP27 (ENSMMSG00000021683) #32	ENSMMSG00000022173 #33	ENSMMSG00000022222	RDM1 (ENSMMSG00000022455)	LYZL6 (ENSMMSG00000022585)	RPRML (ENSMMSG00000022597)	ENSMMSG00000022628
Bovidae	ANCESTRAL SPECIES	2	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Goat	MODERN SPECIES	10	ENSCHIG00000026903	ENSCHIG00000003692	MEIOC (ENSCHIG00000011237) #11	CCDC43 (ENSCHIG00000023225) #12	ENSCHIG00000016101 #13	ADAM11 (ENSCHIG00000026955) #14	GJC1 (ENSCHIG00000008800) #15	EFTUD2 (ENSCHIG00000011603) #17	HIGD1B (ENSCHIG00000024601) #16	CCDC103 (ENSCHIG00000015314) #18	FAM187A (ENSCHIG00000011746) #20	GFAP (ENSCHIG00000023753) #19	KIF18B (ENSCHIG00000021036) #21	C1QL1 (ENSCHIG00000013856) #23	DCAKD (ENSCHIG00000026749) #24	NMT1 (ENSCHIG00000008386) #22	PLCD3 (ENSCHIG00000025100) #25	ACBD4 (ENSCHIG00000018717) #26	HEXIM1 (ENSCHIG00000003683) #27	HEXIM2 (ENSCHIG00000006446) #28	FMNL1 (ENSCHIG00000020799) #29	ENSCHIG00000017574	MAP3K14 (ENSCHIG00000017140) #31	ENSCHIG00000008412	ARHGAP27 (ENSCHIG00000021847) #32	PLEKHM1 (ENSCHIG00000015893) #33	ENSCHIG00000026185	RDM1 (ENSCHIG00000020607)	LYZL6 (ENSCHIG00000010586)	RPRML (ENSCHIG00000022269)	GOSR2 (ENSCHIG00000015990)
Rambouillet Sheep	MODERN SPECIES	2	FZD2 (ENSOARG00020010772) #10	ENSOARG00020010735	MEIOC (ENSOARG00020010618) #11	CCDC43 (ENSOARG00020010559) #12	ENSOARG00020010510 #13	ADAM11 (ENSOARG00020010020) #14	GJC1 (ENSOARG00020009974) #15	HIGD1B (ENSOARG00020025722) #16	EFTUD2 (ENSOARG00020025703) #17	CCDC103 (ENSOARG00020025694) #18	FAM187A (ENSOARG00020025687) #20	GFAP (ENSOARG00020025675) #19	KIF18B (ENSOARG00020025650) #21	C1QL1 (ENSOARG00020025642) #23	DCAKD (ENSOARG00020025640) #24	NMT1 (ENSOARG00020025637) #22	PLCD3 (ENSOARG00020025632) #25	ACBD4 (ENSOARG00020025631) #26	HEXIM1 (ENSOARG00020025627) #27	HEXIM2 (ENSOARG00020025624) #28	FMNL1 (ENSOARG00020025593) #29	ENSOARG00020025572	MAP3K14 (ENSOARG00020025563) #31	ARHGAP27 (ENSOARG00020025324) #32	PLEKHM1 (ENSOARG00020025233) #33	ENSOARG00020025207	ENSOARG00020025194	RDM1 (ENSOARG00020025132)	LYZL6 (ENSOARG00020025112)	RPRML (ENSOARG00020025102)	GOSR2 (ENSOARG00020025023)
Bovinae	ANCESTRAL SPECIES		ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
American bison	MODERN SPECIES	2659	MEIOC (ENSBBBG00000004890) #11	ENSBBBG00000004896	CCDC43 (ENSBBBG00000004902) #12	DBF4B (ENSBBBG00000004917) #13	ADAM11 (ENSBBBG00000019181) #14	GJC1 (ENSBBBG00000019193) #15	HIGD1B (ENSBBBG00000019205) #16	EFTUD2 (ENSBBBG00000019307) #17	CCDC103 (ENSBBBG00000005053) #18	FAM187A (ENSBBBG00000019348) #20	GFAP (ENSBBBG00000005135) #19	KIF18B (ENSBBBG00000005215) #21	ENSBBBG00000005257	ENSBBBG00000019494	DCAKD (ENSBBBG00000019519) #24	NMT1 (ENSBBBG00000005294) #22	PLCD3 (ENSBBBG00000019564) #25	ACBD4 (ENSBBBG00000019620) #26	HEXIM1 (ENSBBBG00000019643) #27	HEXIM2 (ENSBBBG00000005198) #28	FMNL1 (ENSBBBG00000019679) #29	ENSBBBG00000005337	ENSBBBG00000019711 #30	MAP3K14 (ENSBBBG00000006968) #31	ARHGAP27 (ENSBBBG00000019816) #32	PLEKHM1 (ENSBBBG00000019846) #33	ENSBBBG00000019873	ENSBBBG00000019889	RDM1 (ENSBBBG00000020009)	LYZL6 (ENSBBBG00000020047)	RPRML (ENSBBBG00000005103)
Bos	ANCESTRAL SPECIES	1	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Bos_b	ANCESTRAL SPECIES	21	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00960000190698	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Cow	MODERN SPECIES	10	FZD2 (ENSBTAG00000020590) #10	MEIOC (ENSBTAG00000039485) #11	CCDC43 (ENSBTAG00000005693) #12	DBF4B (ENSBTAG00000005696) #13	ADAM11 (ENSBTAG00000001735) #14	GJC1 (ENSBTAG00000004036) #15	HIGD1B (ENSBTAG00000016736) #16	EFTUD2 (ENSBTAG00000013526) #17	CCDC103 (ENSBTAG00000049540) #18	FAM187A (ENSBTAG00000013532) #20	GFAP (ENSBTAG00000013534) #19	KIF18B (ENSBTAG00000008088) #21	C1QL1 (ENSBTAG00000011759) #23	ENSBTAG00000051790	DCAKD (ENSBTAG00000006048) #24	NMT1 (ENSBTAG00000006051) #22	PLCD3 (ENSBTAG00000006052) #25	ACBD4 (ENSBTAG00000006054) #26	HEXIM1 (ENSBTAG00000006056) #27	HEXIM2 (ENSBTAG00000024974) #28	FMNL1 (ENSBTAG00000004196) #29	ENSBTAG00000024975	MAP3K14 (ENSBTAG00000007084) #31	ARHGAP27 (ENSBTAG00000000571) #32	ENSBTAG00000054347 #32	PLEKHM1 (ENSBTAG00000020359) #33	ENSBTAG00000050518	ENSBTAG00000027274	ENSBTAG00000050086	RDM1 (ENSBTAG00000000030)	LYZL6 (ENSBTAG00000000029)
Hybrid Bos Indicus	MODERN SPECIES	10	FZD2 (ENSBIXG00005007736) #10	MEIOC (ENSBIXG00005025340) #11	CCDC43 (ENSBIXG00005025309) #12	ENSBIXG00005006523 #13	ADAM11 (ENSBIXG00005025270) #14	GJC1 (ENSBIXG00005025190) #15	ENSBIXG00005025158 #16	EFTUD2 (ENSBIXG00005006492) #17	CCDC103 (ENSBIXG00005024900) #18	GFAP (ENSBIXG00005024852) #19	FAM187A (ENSBIXG00005024817) #20	KIF18B (ENSBIXG00005024797) #21	C1QL1 (ENSBIXG00005024764) #23	ENSBIXG00005004223	DCAKD (ENSBIXG00005004220) #24	NMT1 (ENSBIXG00005024675) #22	PLCD3 (ENSBIXG00005024644) #25	ACBD4 (ENSBIXG00005024605) #26	HEXIM1 (ENSBIXG00005024526) #27	HEXIM2 (ENSBIXG00005024515) #28	FMNL1 (ENSBIXG00005007626) #29	ENSBIXG00005024363	ENSBIXG00005004153 #30	MAP3K14 (ENSBIXG00005024296) #31	ARHGAP27 (ENSBIXG00005024211) #32	PLEKHM1 (ENSBIXG00005024026) #33	ENSBIXG00005023957	RDM1 (ENSBIXG00005023821)	ENSBIXG00005004036	RPRML (ENSBIXG00005023362)	WNT9B (ENSBIXG00005023347)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a.c	ENSGT00950000183192.a.b
Domestic yak	MODERN SPECIES	10	ENSBGRG00000025152	FZD2 (ENSBGRG00000025139) #10	MEIOC (ENSBGRG00000025128) #11	ENSBGRG00000025115	CCDC43 (ENSBGRG00000025084) #12	ENSBGRG00000025059 #13	ADAM11 (ENSBGRG00000025008) #14	GJC1 (ENSBGRG00000024990) #15	HIGD1B (ENSBGRG00000024979) #16	EFTUD2 (ENSBGRG00000024717) #17	CCDC103 (ENSBGRG00000024666) #18	GFAP (ENSBGRG00000024494) #19	KIF18B (ENSBGRG00000024427) #21	C1QL1 (ENSBGRG00000024388) #23	DCAKD (ENSBGRG00000024352) #24	NMT1 (ENSBGRG00000024214) #22	PLCD3 (ENSBGRG00000024136) #25	ACBD4 (ENSBGRG00000024020) #26	HEXIM1 (ENSBGRG00000023992) #27	HEXIM2 (ENSBGRG00000023973) #28	FMNL1 (ENSBGRG00000023723) #29	ENSBGRG00000023561	ENSBGRG00000023545 #30	MAP3K14 (ENSBGRG00000023427) #31	ARHGAP27 (ENSBGRG00000023143) #32	PLEKHM1 (ENSBGRG00000022981) #33	ENSBGRG00000022765	ENSBGRG00000022711	RDM1 (ENSBGRG00000022032)	ENSBGRG00000021989	ENSBGRG00000021967
Wild yak	MODERN SPECIES	1521	MEIOC (ENSBMUG00000009221) #11	ENSBMUG00000009225	CCDC43 (ENSBMUG00000009242) #12	ENSBMUG00000009281 #13	ADAM11 (ENSBMUG00000009307) #14	GJC1 (ENSBMUG00000009327) #15	HIGD1B (ENSBMUG00000009339) #16	EFTUD2 (ENSBMUG00000009360) #17	ENSBMUG00000009381 #18	FAM187A (ENSBMUG00000009387) #20	GFAP (ENSBMUG00000009419) #19	KIF18B (ENSBMUG00000009437) #21	ENSBMUG00000009450	ENSBMUG00000009458	DCAKD (ENSBMUG00000009466) #24	NMT1 (ENSBMUG00000009542) #22
Suina	ANCESTRAL SPECIES		ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854
Chacoan peccary	MODERN SPECIES	941	FZD2 (ENSCWAG00000004718) #10	MEIOC (ENSCWAG00000004731) #11	CCDC43 (ENSCWAG00000004780) #12	ENSCWAG00000004805 #13	ADAM11 (ENSCWAG00000004848) #14	GJC1 (ENSCWAG00000005004) #15	HIGD1B (ENSCWAG00000005032) #16	EFTUD2 (ENSCWAG00000005059) #17	CCDC103 (ENSCWAG00000005206) #18	FAM187A (ENSCWAG00000005249) #20	GFAP (ENSCWAG00000005286) #19	KIF18B (ENSCWAG00000005448) #21	C1QL1 (ENSCWAG00000005718) #23	ENSCWAG00000005739	DCAKD (ENSCWAG00000005752) #24	NMT1 (ENSCWAG00000005783) #22	PLCD3 (ENSCWAG00000005820) #25	ACBD4 (ENSCWAG00000005851) #26	HEXIM1 (ENSCWAG00000005909) #27	HEXIM2 (ENSCWAG00000005917) #28	FMNL1 (ENSCWAG00000005945) #29	ENSCWAG00000006075	ENSCWAG00000006112 #30	MAP3K14 (ENSCWAG00000006138) #31	ARHGAP27 (ENSCWAG00000006214) #32	ENSCWAG00000006362 #33	ENSCWAG00000006383 #33
Pig	MODERN SPECIES	3	GPATCH8 (ENSSSCG00000017357) #9	FZD2 (ENSSSCG00000029838) #10	MEIOC (ENSSSCG00000017351) #11	CCDC43 (ENSSSCG00000017352) #12	DBF4B (ENSSSCG00000037238) #13	ADAM11 (ENSSSCG00000017349) #14	GJC1 (ENSSSCG00000021306) #15	HIGD1B (ENSSSCG00000017347) #16	EFTUD2 (ENSSSCG00000017346) #17	ENSSSCG00000017345 #18	FAM187A (ENSSSCG00000017344) #20	GFAP (ENSSSCG00000017343) #19	KIF18B (ENSSSCG00000017342) #21	C1QL1 (ENSSSCG00000039101) #23	DCAKD (ENSSSCG00000017340) #24	NMT1 (ENSSSCG00000017339) #22	PLCD3 (ENSSSCG00000017338) #25	ACBD4 (ENSSSCG00000017337) #26	HEXIM1 (ENSSSCG00000017336) #27	HEXIM2 (ENSSSCG00000017335) #28	FMNL1 (ENSSSCG00000017333) #29	ENSSSCG00000017331 #30	MAP3K14 (ENSSSCG00000017330) #31	ARHGAP27 (ENSSSCG00000017328) #32	PLEKHM1 (ENSSSCG00000017325) #33	ENSSSCG00000051222	ENSSSCG00000053573	ENSSSCG00000017577	ENSSSCG00000038212	LYZL6 (ENSSSCG00000017321)	RPRML (ENSSSCG00000017320)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000167585	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Xenarthra	ANCESTRAL SPECIES	196								ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111.db #33
Armadillo	MODERN SPECIES	1597						ADAM11 (ENSDNOG00000041024) #14	ENSDNOG00000045808	GJC1 (ENSDNOG00000012993) #15	HIGD1B (ENSDNOG00000040820) #16	EFTUD2 (ENSDNOG00000008033) #17	CCDC103 (ENSDNOG00000041803) #18	GFAP (ENSDNOG00000038723) #19	KIF18B (ENSDNOG00000001420) #21	C1QL1 (ENSDNOG00000001416) #23	DCAKD (ENSDNOG00000046858) #24	NMT1 (ENSDNOG00000008858) #22	PLCD3 (ENSDNOG00000008883) #25	ACBD4 (ENSDNOG00000004933) #26	HEXIM1 (ENSDNOG00000042085) #27	HEXIM2 (ENSDNOG00000008936) #28	FMNL1 (ENSDNOG00000024936) #29	ENSDNOG00000018041 #31	ARHGAP27 (ENSDNOG00000035364) #32	ENSDNOG00000032131 #33	ENSDNOG00000025149
Afrotheria	ANCESTRAL SPECIES	25	ENSGT00940000160653	ENSGT00940000160329	ENSGT00390000016495	ENSGT00950000183019.f.b.a	ENSGT00940000156707	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Tenrec	MODERN SPECIES	7240																NMT1 (ENSETEG00000011261) #22
Afrotheria_a	ANCESTRAL SPECIES	24	ENSGT00940000160653	ENSGT00940000160329	ENSGT00390000016495	ENSGT00950000183019.f.b.a	ENSGT00940000156707	ENSGT00940000161665	ENSGT00940000161132	ENSGT00390000007809.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.b	ENSGT00940000160203	ENSGT00390000012132	ENSGT00940000155969	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00390000006879 #30	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599
Elephant	MODERN SPECIES	310	GPATCH8 (ENSLAFG00000032250) #9	FZD2 (ENSLAFG00000009200) #10	MEIOC (ENSLAFG00000017916) #11	CCDC43 (ENSLAFG00000017923) #12	ENSLAFG00000008061 #13	ADAM11 (ENSLAFG00000011340) #14	GJC1 (ENSLAFG00000009986) #15	HIGD1B (ENSLAFG00000015338) #16	EFTUD2 (ENSLAFG00000015344) #17	CCDC103 (ENSLAFG00000020764) #18	FAM187A (ENSLAFG00000007045) #20	GFAP (ENSLAFG00000007046) #19	KIF18B (ENSLAFG00000007052) #21	ENSLAFG00000026328	DCAKD (ENSLAFG00000004872) #24	NMT1 (ENSLAFG00000004874) #22	PLCD3 (ENSLAFG00000022912) #25	ACBD4 (ENSLAFG00000004877) #26	HEXIM1 (ENSLAFG00000022721) #27	HEXIM2 (ENSLAFG00000014694) #28	FMNL1 (ENSLAFG00000023294) #29	ENSLAFG00000031041	ENSLAFG00000026857 #30	MAP3K14 (ENSLAFG00000005357) #31	ARHGAP27 (ENSLAFG00000001398) #32	PLEKHM1 (ENSLAFG00000020707) #33	RDM1 (ENSLAFG00000029300)	LYZL6 (ENSLAFG00000029877)	RPRML (ENSLAFG00000030616)	GOSR2 (ENSLAFG00000015660)	WNT9B (ENSLAFG00000023072)
Hyrax	MODERN SPECIES	2642																NMT1 (ENSPCAG00000015516) #22	PLCD3 (ENSPCAG00000015581) #25	ENSPCAG00000015674 #26	HEXIM1 (ENSPCAG00000015764) #27	HEXIM2 (ENSPCAG00000015843) #28
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000154756.A	ENSGT00940000154756.B	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000154756.A	ENSGT00940000154756.B	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT01020000230794	ENSGT00940000156292 #29	ENSGT00940000163904	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00530000063282	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00940000154756.A	ENSGT00940000154756.B	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00940000161690	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000154756.A	ENSGT00940000154756.B	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00950000182860.a.a.a #32	ENSGT00940000155111 #33	ENSGT00390000018397	ENSGT00390000010523.c.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00940000158410 #35
koala	MODERN SPECIES	67	GPATCH8 (ENSPCIG00000019927) #9	FZD2 (ENSPCIG00000002347) #10	MEIOC (ENSPCIG00000017058) #11	CCDC43 (ENSPCIG00000017059) #12	ENSPCIG00000017061 #13	ADAM11 (ENSPCIG00000017063) #14	GJC1 (ENSPCIG00000017069) #15	HIGD1B (ENSPCIG00000015024) #16	EFTUD2 (ENSPCIG00000015027) #17	CCDC103 (ENSPCIG00000015029) #18	FAM187A (ENSPCIG00000015030) #20	GFAP (ENSPCIG00000015031) #19	KIF18B (ENSPCIG00000015036) #21	C1QL1 (ENSPCIG00000015042) #23	DCAKD (ENSPCIG00000031051) #24	NMT1 (ENSPCIG00000015046) #22	PLCD3 (ENSPCIG00000015049) #25	ACBD4 (ENSPCIG00000015054) #26	HEXIM1 (ENSPCIG00000015058) #27	HEXIM2 (ENSPCIG00000015059) #28	FMNL1 (ENSPCIG00000015073) #29	ENSPCIG00000015110	ENSPCIG00000031899	MAP3K14 (ENSPCIG00000015117) #31	ARHGAP27 (ENSPCIG00000015125) #32	PLEKHM1 (ENSPCIG00000015137) #33	RDM1 (ENSPCIG00000032544)	RPRML (ENSPCIG00000019626)	GOSR2 (ENSPCIG00000019627)	WNT9B (ENSPCIG00000019629)	WNT3 (ENSPCIG00000019631)
Common wonbat	MODERN SPECIES	1037	FZD2 (ENSVURG00010008647) #10	MEIOC (ENSVURG00010008651) #11	ENSVURG00010008656	CCDC43 (ENSVURG00010008658) #12	ENSVURG00010008677 #13	ADAM11 (ENSVURG00010008686) #14	GJC1 (ENSVURG00010008699) #15	HIGD1B (ENSVURG00010008720) #16	EFTUD2 (ENSVURG00010008744) #17	CCDC103 (ENSVURG00010008767) #18	FAM187A (ENSVURG00010008779) #20	GFAP (ENSVURG00010008786) #19	KIF18B (ENSVURG00010008819) #21	C1QL1 (ENSVURG00010008837) #23	DCAKD (ENSVURG00010008848) #24	NMT1 (ENSVURG00010008861) #22	PLCD3 (ENSVURG00010008894) #25	ENSVURG00010008922 #26	HEXIM1 (ENSVURG00010008960) #27	HEXIM2 (ENSVURG00010008975) #28	FMNL1 (ENSVURG00010008983) #29	MAP3K14 (ENSVURG00010009014) #31	ARHGAP27 (ENSVURG00010009033) #32	ENSVURG00010009046 #32	PLEKHM1 (ENSVURG00010009056) #33	RDM1 (ENSVURG00010009075)	RPRML (ENSVURG00010009081)	GOSR2 (ENSVURG00010009095)	WNT9B (ENSVURG00010009133)	WNT3 (ENSVURG00010009155)	NSF (ENSVURG00010009167)
Wallaby	MODERN SPECIES	4275																NMT1 (ENSMEUG00000009793) #22
Tasmanian devil	MODERN SPECIES	3	ITGA2B (ENSSHAG00000016072) #8	GPATCH8 (ENSSHAG00000028651) #9	FZD2 (ENSSHAG00000020649) #10	MEIOC (ENSSHAG00000005550) #11	CCDC43 (ENSSHAG00000005898) #12	ENSSHAG00000030377 #13	GJC1 (ENSSHAG00000028641) #15	HIGD1B (ENSSHAG00000008111) #16	EFTUD2 (ENSSHAG00000008134) #17	CCDC103 (ENSSHAG00000008518) #18	FAM187A (ENSSHAG00000008566) #20	GFAP (ENSSHAG00000008606) #19	KIF18B (ENSSHAG00000008805) #21	C1QL1 (ENSSHAG00000009405) #23	DCAKD (ENSSHAG00000010012) #24	ENSSHAG00000010434 #22	PLCD3 (ENSSHAG00000010634) #25	ACBD4 (ENSSHAG00000029591) #26	HEXIM1 (ENSSHAG00000029679) #27	HEXIM2 (ENSSHAG00000011037) #28	ENSSHAG00000021928	FMNL1 (ENSSHAG00000011358) #29	ENSSHAG00000025300	MAP3K14 (ENSSHAG00000011692) #31	ENSSHAG00000013130 #33	ARHGAP27 (ENSSHAG00000012765) #32	ENSSHAG00000028236	ENSSHAG00000013777	GOSR2 (ENSSHAG00000014026)	WNT9B (ENSSHAG00000030085)	ENSSHAG00000013836
Opossum	MODERN SPECIES	1	ENSMODG00000036709	FZD2 (ENSMODG00000011428) #10	MEIOC (ENSMODG00000011418) #11	CCDC43 (ENSMODG00000011411) #12	ENSMODG00000024040 #13	ADAM11 (ENSMODG00000011397) #14	GJC1 (ENSMODG00000011360) #15	HIGD1B (ENSMODG00000011357) #16	EFTUD2 (ENSMODG00000011347) #17	CCDC103 (ENSMODG00000011308) #18	FAM187A (ENSMODG00000024031) #20	GFAP (ENSMODG00000011301) #19	KIF18B (ENSMODG00000011263) #21	C1QL1 (ENSMODG00000011247) #23	DCAKD (ENSMODG00000011245) #24	NMT1 (ENSMODG00000011238) #22	PLCD3 (ENSMODG00000011222) #25	ENSMODG00000011190 #26	HEXIM1 (ENSMODG00000011185) #27	HEXIM2 (ENSMODG00000024024) #28	FMNL1 (ENSMODG00000011181) #29	ENSMODG00000011161 #31	ENSMODG00000011147 #32	ENSMODG00000049523 #32	ENSMODG00000043060 #32	PLEKHM1 (ENSMODG00000011127) #33	ENSMODG00000011110	RDM1 (ENSMODG00000011101)	RPRML (ENSMODG00000024021)	GOSR2 (ENSMODG00000011089)	WNT9B (ENSMODG00000050223)
Platypus	MODERN SPECIES	2	FAM171A2 (ENSOANG00000043179) #7	ITGA2B (ENSOANG00000045365) #8	GPATCH8 (ENSOANG00000040999) #9	FZD2 (ENSOANG00000004982) #10	MEIOC (ENSOANG00000009537) #11	CCDC43 (ENSOANG00000009536) #12	ADAM11 (ENSOANG00000042982) #14	GJC1 (ENSOANG00000001785) #15	EFTUD2 (ENSOANG00000048763) #17	ENSOANG00000036607 #18	FAM187A (ENSOANG00000043685) #20	ENSOANG00000037388 #19	KIF18B (ENSOANG00000010540) #21	ENSOANG00000039542 #23	DCAKD (ENSOANG00000045874) #24	NMT1 (ENSOANG00000043012) #22	PLCD3 (ENSOANG00000044708) #25	ACBD4 (ENSOANG00000048249) #26	HEXIM1 (ENSOANG00000036664) #27	FMNL1 (ENSOANG00000012364) #29	ENSOANG00000032108	MAP3K14 (ENSOANG00000036858) #31	MYO1D (ENSOANG00000044349)	CDK5R1 (ENSOANG00000048451)	PSMD11 (ENSOANG00000036241)	ENSOANG00000051242	SMARCD2 (ENSOANG00000006178)	PSMC5 (ENSOANG00000036065)	FTSJ3 (ENSOANG00000044242)	DDX42 (ENSOANG00000000265)	CCDC47 (ENSOANG00000049366)
Sauria	ANCESTRAL SPECIES	29	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00950000183080.a.b.b	ENSGT00950000183080.a.b.a.a	ENSGT00530000064085	ENSGT00940000157854
Archelosauria	ANCESTRAL SPECIES	21	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a
Archosauria	ANCESTRAL SPECIES	20	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062
Aves	ANCESTRAL SPECIES	26	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062
Neognathae	ANCESTRAL SPECIES	23	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062
Neognathae_b	ANCESTRAL SPECIES	23	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062
Passeriformes	ANCESTRAL SPECIES	40	ENSGT01030000234722.a.a.a.b.b.b.b.a.c	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062
Passeriformes_d	ANCESTRAL SPECIES	25	ENSGT01030000234722.a.a.a.b.b.b.b.a.c.b.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292.f #29	ENSGT00940000156497 #31	ENSGT01100000263998	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b
Passeriformes_g	ANCESTRAL SPECIES	26	ENSGT01030000234722.a.a.a.b.b.b.b.a.d.b.a.b.b.a	ENSGT01030000234722.a.a.a.b.b.b.b.a.d.b.a.b.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000163949	ENSGT00940000156292.f #29	ENSGT00940000156497 #31	ENSGT01100000263998	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062	ENSGT00950000182860.a.a.a #32
Medium ground finch	MODERN SPECIES	220	ENSGFOG00000004509	ENSGFOG00000004515	GTSF1 (ENSGFOG00000004523)	GOSR2 (ENSGFOG00000004532)	WNT9B (ENSGFOG00000004554)	WNT3 (ENSGFOG00000004580)	NSF (ENSGFOG00000004590)	MEIOC (ENSGFOG00000004626) #11	CCDC43 (ENSGFOG00000004676) #12	ENSGFOG00000004707 #13	GJC1 (ENSGFOG00000004720) #15	EFTUD2 (ENSGFOG00000004725) #17	CCDC103 (ENSGFOG00000004758) #18	FAM187A (ENSGFOG00000004789) #20	DCAKD (ENSGFOG00000004803) #24	NMT1 (ENSGFOG00000004817) #22	PLCD3 (ENSGFOG00000004843) #25	FMNL1 (ENSGFOG00000004913) #29	MAP3K14 (ENSGFOG00000005076) #31	MYO1D (ENSGFOG00000005225)	ENSGFOG00000005862	PSMD11 (ENSGFOG00000005870)	FZD2 (ENSGFOG00000005896) #10	GPATCH8 (ENSGFOG00000005908) #9	ENSGFOG00000005912 #8	GRN (ENSGFOG00000005927)	ENSGFOG00000005948	ARHGAP27 (ENSGFOG00000005955) #32	PLEKHM1 (ENSGFOG00000005972) #33
Passeroidea	ANCESTRAL SPECIES	51	ENSGT01030000234722.a.a.a.b.b.b.b.a.d.a.a	ENSGT01030000234722.a.a.a.b.b.a.i.b.a	ENSGT00950000183192.a.b	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00940000159539 #19	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000163949	ENSGT00940000156292.f #29	ENSGT00940000156497 #31	ENSGT01100000263998	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062	ENSGT00950000182860.a.a.a #32
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	20	WNT9B (ENSTGUG00000002017)	WNT3 (ENSTGUG00000002021)	NSF (ENSTGUG00000002022)	MEIOC (ENSTGUG00000002050) #11	CCDC43 (ENSTGUG00000020940) #12	ENSTGUG00000002056 #13	ADAM11 (ENSTGUG00000020516) #14	ENSTGUG00000002035 #22	GJC1 (ENSTGUG00000021660) #15	EFTUD2 (ENSTGUG00000002065) #17	ENSTGUG00000029742 #18	ENSTGUG00000002087 #20	KIF18B (ENSTGUG00000029338) #21	ENSTGUG00000021772	DCAKD (ENSTGUG00000002089) #24	ENSTGUG00000019907 #22	HEXIM1 (ENSTGUG00000020843) #27	PLCD3 (ENSTGUG00000014417) #25	ENSTGUG00000028058	ENSTGUG00000025981	ENSTGUG00000023005 #29	ENSTGUG00000019085	ENSTGUG00000023075 #29	MAP3K14 (ENSTGUG00000002094) #31	ENSTGUG00000027823	MYO1D (ENSTGUG00000002110)	CDK5R1 (ENSTGUG00000021551)	PSMD11 (ENSTGUG00000002139)	GPATCH8 (ENSTGUG00000029123) #9	ITGA2B (ENSTGUG00000020445) #8	FAM171A2 (ENSTGUG00000023513) #7
Zebra finch	MODERN SPECIES	20	ENSTGUG00000028518	ENSTGUG00000028731	ENSTGUG00000023860	ENSTGUG00000028741	ENSTGUG00000023631	ENSTGUG00000027778	ENSTGUG00000027459	GOSR2 (ENSTGUG00000002011)	WNT9B (ENSTGUG00000002017)	WNT3 (ENSTGUG00000002021)	NSF (ENSTGUG00000002022)	MEIOC (ENSTGUG00000002050) #11	CCDC43 (ENSTGUG00000020940) #12	ENSTGUG00000002056 #13	ADAM11 (ENSTGUG00000020516) #14	ENSTGUG00000002035 #22	GJC1 (ENSTGUG00000021660) #15	EFTUD2 (ENSTGUG00000002065) #17	ENSTGUG00000029742 #18	ENSTGUG00000002087 #20	KIF18B (ENSTGUG00000029338) #21	ENSTGUG00000021772	DCAKD (ENSTGUG00000002089) #24	ENSTGUG00000019907 #22	HEXIM1 (ENSTGUG00000020843) #27	PLCD3 (ENSTGUG00000014417) #25	ENSTGUG00000028058	ENSTGUG00000025981	ENSTGUG00000023005 #29	ENSTGUG00000019085	ENSTGUG00000023075 #29
Common canary	MODERN SPECIES	42	ENSSCAG00000008666	ENSSCAG00000008664	GTSF1 (ENSSCAG00000008660)	GOSR2 (ENSSCAG00000008656)	WNT9B (ENSSCAG00000008652)	WNT3 (ENSSCAG00000008640)	NSF (ENSSCAG00000008627)	MEIOC (ENSSCAG00000008604) #11	CCDC43 (ENSSCAG00000008597) #12	ENSSCAG00000008590 #13	GJC1 (ENSSCAG00000008531) #15	EFTUD2 (ENSSCAG00000008521) #17	CCDC103 (ENSSCAG00000008517) #18	GFAP (ENSSCAG00000008514) #19	DCAKD (ENSSCAG00000008511) #24	NMT1 (ENSSCAG00000008503) #22	PLCD3 (ENSSCAG00000008489) #25	ENSSCAG00000008480	FMNL1 (ENSSCAG00000008478) #29	MAP3K14 (ENSSCAG00000008474) #31	ENSSCAG00000008470	MYO1D (ENSSCAG00000008461)	ENSSCAG00000008457	PSMD11 (ENSSCAG00000008447)	FZD2 (ENSSCAG00000008440) #10	GPATCH8 (ENSSCAG00000008436) #9	ITGA2B (ENSSCAG00000008388) #8	ENSSCAG00000008337	TMEM98 (ENSSCAG00000008325)	ARHGAP27 (ENSSCAG00000008308) #32	ENSSCAG00000008279 #32
Flycatcher	MODERN SPECIES	31													ENSFALG00000027873 #20	ENSFALG00000009430	DCAKD (ENSFALG00000009421) #24	NMT1 (ENSFALG00000009413) #22	PLCD3 (ENSFALG00000009390) #25	ACBD4 (ENSFALG00000009369) #26	HEXIM1 (ENSFALG00000026844) #27	ENSFALG00000009361
Great tit	MODERN SPECIES	20	GTSF1 (ENSPMJG00000002968)	GOSR2 (ENSPMJG00000002975)	WNT9B (ENSPMJG00000002978)	WNT3 (ENSPMJG00000002997)	NSF (ENSPMJG00000003013)	MEIOC (ENSPMJG00000003058) #11	CCDC43 (ENSPMJG00000003062) #12	ENSPMJG00000003065 #13	ADAM11 (ENSPMJG00000003078) #14	GJC1 (ENSPMJG00000003190) #15	EFTUD2 (ENSPMJG00000003191) #17	CCDC103 (ENSPMJG00000003198) #18	GFAP (ENSPMJG00000003202) #19	FAM187A (ENSPMJG00000003206) #20	DCAKD (ENSPMJG00000003249) #24	NMT1 (ENSPMJG00000003370) #22	PLCD3 (ENSPMJG00000003378) #25	ENSPMJG00000003389	ACBD4 (ENSPMJG00000003397) #26	HEXIM1 (ENSPMJG00000003418) #27	ENSPMJG00000003420	FMNL1 (ENSPMJG00000003427) #29	MAP3K14 (ENSPMJG00000003439) #31	MYO1D (ENSPMJG00000003464)	PSMD11 (ENSPMJG00000003502)	FZD2 (ENSPMJG00000004014) #10	GPATCH8 (ENSPMJG00000004015) #9	ITGA2B (ENSPMJG00000004016) #8	ENSPMJG00000004030 #7	ENSPMJG00000004033	TMEM98 (ENSPMJG00000004038)
Neognathae_c	ANCESTRAL SPECIES	26	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062	ENSGT00950000182860.a.a.a #32
Kakapo	MODERN SPECIES	12	WNT9B (ENSSHBG00005000744)	WNT3 (ENSSHBG00005000756)	NSF (ENSSHBG00005000762)	ENSSHBG00005000768	CCDC43 (ENSSHBG00005000778) #12	ENSSHBG00005000781	ADAM11 (ENSSHBG00005011909) #14	GJC1 (ENSSHBG00005012344) #15	EFTUD2 (ENSSHBG00005012361) #17	CCDC103 (ENSSHBG00005012381) #18	FAM187A (ENSSHBG00005012388) #20	GFAP (ENSSHBG00005012401) #19	KIF18B (ENSSHBG00005012447) #21	ENSSHBG00005012591	DCAKD (ENSSHBG00005012603) #24	NMT1 (ENSSHBG00005012610) #22	PLCD3 (ENSSHBG00005012635) #25	ACBD4 (ENSSHBG00005012665) #26	HEXIM1 (ENSSHBG00005012679) #27	FMNL1 (ENSSHBG00005012698) #29	MAP3K14 (ENSSHBG00005012754) #31	MYO1D (ENSSHBG00005012941)	CDK5R1 (ENSSHBG00005013454)	PSMD11 (ENSSHBG00005013471)	FZD2 (ENSSHBG00005013494) #10	GPATCH8 (ENSSHBG00005013505) #9	ITGA2B (ENSSHBG00005013548) #8	FAM171A2 (ENSSHBG00005013640) #7	GRN (ENSSHBG00005013657)	TMEM98 (ENSSHBG00005013674)	ARHGAP27 (ENSSHBG00005013698) #32
Golden eagle	MODERN SPECIES	24	WNT9B (ENSACCG00020000414)	WNT3 (ENSACCG00020000397)	NSF (ENSACCG00020000378)	MEIOC (ENSACCG00020016488) #11	CCDC43 (ENSACCG00020016483) #12	ENSACCG00020016479 #13	ADAM11 (ENSACCG00020016471) #14	GJC1 (ENSACCG00020016464) #15	EFTUD2 (ENSACCG00020016459) #17	CCDC103 (ENSACCG00020016446) #18	FAM187A (ENSACCG00020016444) #20	GFAP (ENSACCG00020016439) #19	KIF18B (ENSACCG00020016425) #21	ENSACCG00020016422	DCAKD (ENSACCG00020016417) #24	NMT1 (ENSACCG00020016412) #22	PLCD3 (ENSACCG00020016397) #25	ACBD4 (ENSACCG00020016374) #26	HEXIM1 (ENSACCG00020016371) #27	FMNL1 (ENSACCG00020016360) #29	MAP3K14 (ENSACCG00020016346) #31	MYO1D (ENSACCG00020016306)	CDK5R1 (ENSACCG00020016275)	PSMD11 (ENSACCG00020016270)	FZD2 (ENSACCG00020016265) #10	GPATCH8 (ENSACCG00020016255) #9	ITGA2B (ENSACCG00020016242) #8	FAM171A2 (ENSACCG00020016232) #7	ENSACCG00020016207	TMEM98 (ENSACCG00020016177)	ARHGAP27 (ENSACCG00020016149) #32
Galloanserae	ANCESTRAL SPECIES	23	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT00390000012062
Anatidae	ANCESTRAL SPECIES	72	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8
Duck	MODERN SPECIES	19	ENSAPLG00000015744	ENSAPLG00000025431	ENSAPLG00000004814	ENSAPLG00000004588	WNT9B (ENSAPLG00000004493)	NSF (ENSAPLG00000003325)	ENSAPLG00000022397	CCDC43 (ENSAPLG00000003028) #12	MEIOC (ENSAPLG00000003270) #11	GJC1 (ENSAPLG00000001944) #15	EFTUD2 (ENSAPLG00000011036) #17	ENSAPLG00000010875 #18	FAM187A (ENSAPLG00000021615) #20	ENSAPLG00000010363 #19	DCAKD (ENSAPLG00000026366) #24	NMT1 (ENSAPLG00000009872) #22	ENSAPLG00000020177 #25	ENSAPLG00000030282	FMNL1 (ENSAPLG00000003619) #29	MAP3K14 (ENSAPLG00000004431) #31	MYO1D (ENSAPLG00000005131)	CDK5R1 (ENSAPLG00000020487)	PSMD11 (ENSAPLG00000002804)	FZD2 (ENSAPLG00000002180) #10	GPATCH8 (ENSAPLG00000003095) #9	ITGA2B (ENSAPLG00000003235) #8	ENSAPLG00000004111 #32	ENSAPLG00000016599	RDM1 (ENSAPLG00000004384)	ENSAPLG00000004550	CD79B (ENSAPLG00000004879)
Pink-footed goose	MODERN SPECIES	267	WNT3 (ENSABRG00000013420)	NSF (ENSABRG00000013391)	MEIOC (ENSABRG00000013343) #11	ENSABRG00000013327 #12	ENSABRG00000013321 #13	ADAM11 (ENSABRG00000012665) #14	GJC1 (ENSABRG00000012502) #15	EFTUD2 (ENSABRG00000012476) #17	ENSABRG00000012453	CCDC103 (ENSABRG00000012442) #18	FAM187A (ENSABRG00000012438) #20	GFAP (ENSABRG00000012431) #19	KIF18B (ENSABRG00000012401) #21	C1QL1 (ENSABRG00000012377) #23	DCAKD (ENSABRG00000012329) #24	NMT1 (ENSABRG00000012294) #22	PLCD3 (ENSABRG00000012232) #25	ACBD4 (ENSABRG00000012188) #26	HEXIM1 (ENSABRG00000012173) #27	ENSABRG00000012152	FMNL1 (ENSABRG00000012062) #29	MAP3K14 (ENSABRG00000011977) #31	MYO1D (ENSABRG00000011918)	CDK5R1 (ENSABRG00000011835)	PSMD11 (ENSABRG00000011795)
Phasianidae	ANCESTRAL SPECIES	21	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00470000042293.a.b	ENSGT00390000012062	ENSGT00950000182860.a.a.a #32
Japanese quail	MODERN SPECIES	19	WNT9B (ENSCJPG00005019000)	WNT3 (ENSCJPG00005019001)	NSF (ENSCJPG00005019002)	MEIOC (ENSCJPG00005019003) #11	CCDC43 (ENSCJPG00005019004) #12	ENSCJPG00005019005 #13	ADAM11 (ENSCJPG00005019006) #14	GJC1 (ENSCJPG00005019022) #15	EFTUD2 (ENSCJPG00005019023) #17	CCDC103 (ENSCJPG00005019024) #18	GFAP (ENSCJPG00005019025) #19	FAM187A (ENSCJPG00005019026) #20	KIF18B (ENSCJPG00005019027) #21	ENSCJPG00005019028	DCAKD (ENSCJPG00005019029) #24	NMT1 (ENSCJPG00005019030) #22	ENSCJPG00005019031	PLCD3 (ENSCJPG00005019032) #25	ACBD4 (ENSCJPG00005019033) #26	HEXIM1 (ENSCJPG00005019034) #27	ENSCJPG00005019035	FMNL1 (ENSCJPG00005019038) #29	MAP3K14 (ENSCJPG00005019066) #31	MYO1D (ENSCJPG00005019070)	CDK5R1 (ENSCJPG00005019075)	PSMD11 (ENSCJPG00005019081)	FZD2 (ENSCJPG00005019108) #10	GPATCH8 (ENSCJPG00005019110) #9	ENSCJPG00005019113 #7	ENSCJPG00005019114	OPA3 (ENSCJPG00005019116)
Phasianidae_b	ANCESTRAL SPECIES	21	ENSGT00940000158599	ENSGT00940000157854	ENSGT00530000064085	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00470000042293.a.b	ENSGT00390000012062	ENSGT00950000182860.a.a.a #32
Turkey	MODERN SPECIES	21	WNT3 (ENSMGAG00000000740)	NSF (ENSMGAG00000000747)	MEIOC (ENSMGAG00000000795) #11	CCDC43 (ENSMGAG00000021096) #12	ENSMGAG00000010488 #13	ADAM11 (ENSMGAG00000017604) #14	ENSMGAG00000010863 #29	GJC1 (ENSMGAG00000010491) #15	EFTUD2 (ENSMGAG00000010083) #17	ENSMGAG00000022034	CCDC103 (ENSMGAG00000000687) #18	GFAP (ENSMGAG00000000660) #19	KIF18B (ENSMGAG00000000690) #21	ENSMGAG00000015943	DCAKD (ENSMGAG00000000699) #24	NMT1 (ENSMGAG00000000701) #22	PLCD3 (ENSMGAG00000000712) #25	HEXIM1 (ENSMGAG00000020066) #27	ENSMGAG00000000730	MAP3K14 (ENSMGAG00000010881) #31	ENSMGAG00000010899	ENSMGAG00000009586 #9	ENSMGAG00000019852	SLC25A39 (ENSMGAG00000001418)	ENSMGAG00000001805 #37	ENSMGAG00000001962	ENSMGAG00000001822	ENSMGAG00000001866	ENSMGAG00000001941	ENSMGAG00000001753	STRADA (ENSMGAG00000001782)
Chicken	MODERN SPECIES	19	WNT9B (ENSGALG00010025948)	WNT3 (ENSGALG00010025972)	NSF (ENSGALG00010025988)	MEIOC (ENSGALG00010025993) #11	CCDC43 (ENSGALG00010025997) #12	DBF4B (ENSGALG00010025999) #13	ADAM11 (ENSGALG00010021782) #14	GJC3 (ENSGALG00010021869) #15	EFTUD2 (ENSGALG00010021934) #17	CCDC103 (ENSGALG00010021969) #18	FAM187A (ENSGALG00010026363) #20	GFAP (ENSGALG00010021974) #19	KIF18B (ENSGALG00010022002) #21	C1QL1 (ENSGALG00010023752) #23	DCAKD (ENSGALG00010026796) #24	NMT1 (ENSGALG00010023799) #22	PLCD3 (ENSGALG00010023815) #25	ACBD4 (ENSGALG00010023857) #26	HEXIM1 (ENSGALG00010023874) #27	ENSGALG00010023891	FMNL1 (ENSGALG00010023984) #29	MAP3K14 (ENSGALG00010024019) #31	MYO1D (ENSGALG00010024096)	CDK5R1 (ENSGALG00010024126)	PSMD11 (ENSGALG00010024133)	FZD2 (ENSGALG00010026346) #10	GPATCH8 (ENSGALG00010021148) #9	ITGA2B (ENSGALG00010026006) #8	ENSGALG00010026041	ENSGALG00010023487	TMEM98 (ENSGALG00010023527)
African ostrich	MODERN SPECIES	990	GOSR2 (ENSSCUG00000018345)	WNT9B (ENSSCUG00000018346)	WNT3 (ENSSCUG00000018347)	ENSSCUG00000018348	NSF (ENSSCUG00000018349)	MEIOC (ENSSCUG00000018350) #11	CCDC43 (ENSSCUG00000018351) #12	ENSSCUG00000018352 #13	GJC1 (ENSSCUG00000018353) #15	EFTUD2 (ENSSCUG00000018354) #17	CCDC103 (ENSSCUG00000018355) #18	FAM187A (ENSSCUG00000018356) #20	GFAP (ENSSCUG00000018357) #19	KIF18B (ENSSCUG00000018358) #21	DCAKD (ENSSCUG00000018359) #24	NMT1 (ENSSCUG00000018360) #22	PLCD3 (ENSSCUG00000018362) #25	ENSSCUG00000018363	ENSSCUG00000018365	FMNL1 (ENSSCUG00000018366) #29	MAP3K14 (ENSSCUG00000018367) #31	MYO1D (ENSSCUG00000018368)	ENSSCUG00000018369	PSMD11 (ENSSCUG00000018371)	FZD2 (ENSSCUG00000018379) #10	GPATCH8 (ENSSCUG00000018381) #9	ENSSCUG00000018383 #7	ENSSCUG00000018387	TMEM98 (ENSSCUG00000018390)	ARHGAP27 (ENSSCUG00000018394) #32	PLEKHM1 (ENSSCUG00000018396) #33
Australian saltwater crocodile	MODERN SPECIES	66	GJC1 (ENSCPRG00005015326) #15	HIGD1B (ENSCPRG00005015329) #16	EFTUD2 (ENSCPRG00005015334) #17	CCDC103 (ENSCPRG00005015359) #18	FAM187A (ENSCPRG00005015372) #20	GFAP (ENSCPRG00005015384) #19	KIF18B (ENSCPRG00005015452) #21	ENSCPRG00005015462	ENSCPRG00005015464	ENSCPRG00005015467	FOSB (ENSCPRG00005015469)	RTN2 (ENSCPRG00005015475)	ENSCPRG00005015481	OPA3 (ENSCPRG00005015485)	DCAKD (ENSCPRG00005015489) #24	NMT1 (ENSCPRG00005015490) #22	PLCD3 (ENSCPRG00005015493) #25	ACBD4 (ENSCPRG00005015499) #26	HEXIM1 (ENSCPRG00005015504) #27	ENSCPRG00005015508	FMNL1 (ENSCPRG00005000131) #29	MAP3K14 (ENSCPRG00005000161) #31	MYO1D (ENSCPRG00005000311)	CDK5R1 (ENSCPRG00005000361)	PSMD11 (ENSCPRG00005000377)	FZD2 (ENSCPRG00005000517) #10	GPATCH8 (ENSCPRG00005000545) #9	ENSCPRG00005000550 #8	ENSCPRG00005000568 #8	FAM171A2 (ENSCPRG00005000590) #7	GRN (ENSCPRG00005000621)
Cryptodira	ANCESTRAL SPECIES	55	ENSGT00390000003267 #11	ENSGT00940000154756.A	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539.d #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a
Testudinoidea	ANCESTRAL SPECIES	46	ENSGT00390000003267 #11	ENSGT00940000154756.A.ce.a.a	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539.d #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a
Testudinidae	ANCESTRAL SPECIES	57	ENSGT00530000064085	ENSGT00950000183080.a.b.b	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539.c #19	ENSGT00940000159539.d #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b
Abingdon island giant tortoise	MODERN SPECIES	1978											ENSCABG00000005410 #19	ENSCABG00000005407 #19	KIF18B (ENSCABG00000005374) #21	ENSCABG00000005368	DCAKD (ENSCABG00000005365) #24	NMT1 (ENSCABG00000005358) #22	PLCD3 (ENSCABG00000005357) #25	ACBD4 (ENSCABG00000005280) #26	HEXIM1 (ENSCABG00000005274) #27	ENSCABG00000005271	ENSCABG00000005268	FMNL1 (ENSCABG00000005266) #29	MAP3K14 (ENSCABG00000005260) #31	MYO1D (ENSCABG00000005253)
Goode s thornscrub tortoise	MODERN SPECIES	15	NSF (ENSGEVG00005019262)	ENSGEVG00005019290	MEIOC (ENSGEVG00005019302) #11	CCDC43 (ENSGEVG00005019329) #12	DBF4B (ENSGEVG00005019339) #13	ADAM11 (ENSGEVG00005019380) #14	GJC1 (ENSGEVG00005019412) #15	HIGD1B (ENSGEVG00005019419) #16	EFTUD2 (ENSGEVG00005019443) #17	CCDC103 (ENSGEVG00005019527) #18	FAM187A (ENSGEVG00005019532) #20	GFAP (ENSGEVG00005019558) #19	KIF18B (ENSGEVG00005019658) #21	ENSGEVG00005019673	DCAKD (ENSGEVG00005019684) #24	NMT1 (ENSGEVG00005019692) #22	PLCD3 (ENSGEVG00005019703) #25	ACBD4 (ENSGEVG00005019719) #26	HEXIM1 (ENSGEVG00005019730) #27	ENSGEVG00005019738	FMNL1 (ENSGEVG00005019750) #29	ENSGEVG00005019779	MAP3K14 (ENSGEVG00005019787) #31	MYO1D (ENSGEVG00005019810)	CDK5R1 (ENSGEVG00005019842)	PSMD11 (ENSGEVG00005019848)	ENSGEVG00005019854	FZD2 (ENSGEVG00005019857) #10	GPATCH8 (ENSGEVG00005019861) #9	ITGA2B (ENSGEVG00005004398) #8	FAM171A2 (ENSGEVG00005004721) #7
Emydidae	ANCESTRAL SPECIES	65	ENSGT00940000157854	ENSGT00530000064085	ENSGT00950000183080.a.b.b	ENSGT00940000166913	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539.d #19	ENSGT00940000161200 #21	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT01020000230794	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b
painted turtle	MODERN SPECIES	696	ENSCPBG00000008962 #8	GPATCH8 (ENSCPBG00000008955) #9	FZD2 (ENSCPBG00000008951) #10	MEIOC (ENSCPBG00000008949) #11	ENSCPBG00000008945	CCDC43 (ENSCPBG00000008944) #12	ADAM11 (ENSCPBG00000008918) #14	GJC1 (ENSCPBG00000008912) #15	HIGD1B (ENSCPBG00000008906) #16	EFTUD2 (ENSCPBG00000008904) #17	CCDC103 (ENSCPBG00000008902) #18	FAM187A (ENSCPBG00000008897) #20	GFAP (ENSCPBG00000008893) #19	KIF18B (ENSCPBG00000008886) #21	DCAKD (ENSCPBG00000008885) #24	NMT1 (ENSCPBG00000008881) #22	PLCD3 (ENSCPBG00000008873) #25	ACBD4 (ENSCPBG00000008864) #26	HEXIM1 (ENSCPBG00000008858) #27	ENSCPBG00000008849	ENSCPBG00000008845	FMNL1 (ENSCPBG00000005140) #29	MAP3K14 (ENSCPBG00000004936) #31	MYO1D (ENSCPBG00000004886)	CDK5R1 (ENSCPBG00000004869)	PSMD11 (ENSCPBG00000004859)	ZNF207 (ENSCPBG00000004840)	C17orf75 (ENSCPBG00000004828)	RHBDL3 (ENSCPBG00000004814)	RHOT1 (ENSCPBG00000004783)	ENSCPBG00000004765
Three-toed box turtle	MODERN SPECIES	239	NSF (ENSTMTG00000016183)	ENSTMTG00000016240	MEIOC (ENSTMTG00000016254) #11	ENSTMTG00000016267	CCDC43 (ENSTMTG00000016276) #12	DBF4B (ENSTMTG00000016290) #13	ADAM11 (ENSTMTG00000016327) #14	GJC1 (ENSTMTG00000016372) #15	HIGD1B (ENSTMTG00000016381) #16	EFTUD2 (ENSTMTG00000016401) #17	CCDC103 (ENSTMTG00000016469) #18	FAM187A (ENSTMTG00000016478) #20	ENSTMTG00000016493 #19	KIF18B (ENSTMTG00000016588) #21	DCAKD (ENSTMTG00000017001) #24	NMT1 (ENSTMTG00000017020) #22	PLCD3 (ENSTMTG00000017051) #25	HEXIM1 (ENSTMTG00000017110) #27	ENSTMTG00000017114	FMNL1 (ENSTMTG00000017164) #29	ENSTMTG00000017451	MAP3K14 (ENSTMTG00000017460) #31	MYO1D (ENSTMTG00000017486)	CDK5R1 (ENSTMTG00000017526)	PSMD11 (ENSTMTG00000017539)	FZD2 (ENSTMTG00000017557) #10	GPATCH8 (ENSTMTG00000017573) #9	ITGA2B (ENSTMTG00000017628) #8	FAM171A2 (ENSTMTG00000017971) #7	GRN (ENSTMTG00000017982)	TMEM98 (ENSTMTG00000018019)
Chinese turtle	MODERN SPECIES	1488																ENSPSIG00000005333 #22
Lepidosauria	ANCESTRAL SPECIES	72							ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000002808.b #28	ENSGT00940000163949	ENSGT00940000156292 #29	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a	ENSGT00950000183080.a.b.b	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000161812 #10	ENSGT00960000189914	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000008812.b.b	ENSGT00940000157411	ENSGT00940000156497 #31	ENSGT00940000156292 #29	ENSGT00530000063301.a.a	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00940000166580	ENSGT00390000010523.c.a	ENSGT01090000259987.b.b.a.a.b.a
Laterata	ANCESTRAL SPECIES	11	ENSGT00390000003267 #11	ENSGT00940000161812 #10	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000162478 #23	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000008812.b.b	ENSGT00940000157411	ENSGT00940000156497 #31	ENSGT00940000156292 #29	ENSGT00530000063301.a.a	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00940000166580	ENSGT00390000010523.c.a	ENSGT01090000259987.b.b.a.a.b.a
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	4	FZD2 (ENSPMRG00000014853) #10	GPATCH8 (ENSPMRG00000014859) #9	ITGA2B (ENSPMRG00000014873) #8	FAM171A2 (ENSPMRG00000014880) #7	GRN (ENSPMRG00000014893)	GJC1 (ENSPMRG00000014902) #15	HIGD1B (ENSPMRG00000014907) #16	EFTUD2 (ENSPMRG00000014919) #17	CCDC103 (ENSPMRG00000014949) #18	FAM187A (ENSPMRG00000014953) #20	GFAP (ENSPMRG00000010853) #19	KIF18B (ENSPMRG00000010858) #21	C1QL1 (ENSPMRG00000010866) #23	DCAKD (ENSPMRG00000010869) #24	ENSPMRG00000010874 #22	ENSPMRG00000010880 #22	PLCD3 (ENSPMRG00000010884) #25	ACBD4 (ENSPMRG00000010890) #26	HEXIM1 (ENSPMRG00000010892) #27	CDK5R1 (ENSPMRG00000010893)	MYO1D (ENSPMRG00000010899)	ENSPMRG00000010908	FMNL1 (ENSPMRG00000011022) #29	PSMD11 (ENSPMRG00000011418)	NSF (ENSPMRG00000011432)	WNT3 (ENSPMRG00000011447)	ENSPMRG00000011451	WNT9B (ENSPMRG00000011459)	GOSR2 (ENSPMRG00000011484)	ENSPMRG00000011488	RPRML (ENSPMRG00000011491)
Common wall lizard	MODERN SPECIES	4	MEIOC (ENSPMRG00000014812) #11	FZD2 (ENSPMRG00000014853) #10	GPATCH8 (ENSPMRG00000014859) #9	ITGA2B (ENSPMRG00000014873) #8	FAM171A2 (ENSPMRG00000014880) #7	GRN (ENSPMRG00000014893)	GJC1 (ENSPMRG00000014902) #15	HIGD1B (ENSPMRG00000014907) #16	EFTUD2 (ENSPMRG00000014919) #17	CCDC103 (ENSPMRG00000014949) #18	FAM187A (ENSPMRG00000014953) #20	GFAP (ENSPMRG00000010853) #19	KIF18B (ENSPMRG00000010858) #21	C1QL1 (ENSPMRG00000010866) #23	DCAKD (ENSPMRG00000010869) #24	ENSPMRG00000010874 #22	ENSPMRG00000010880 #22	PLCD3 (ENSPMRG00000010884) #25	ACBD4 (ENSPMRG00000010890) #26	HEXIM1 (ENSPMRG00000010892) #27	CDK5R1 (ENSPMRG00000010893)	MYO1D (ENSPMRG00000010899)	ENSPMRG00000010908	FMNL1 (ENSPMRG00000011022) #29	PSMD11 (ENSPMRG00000011418)	NSF (ENSPMRG00000011432)	WNT3 (ENSPMRG00000011447)	ENSPMRG00000011451	WNT9B (ENSPMRG00000011459)	GOSR2 (ENSPMRG00000011484)	ENSPMRG00000011488
Argentine black and white tegu	MODERN SPECIES	32	MEIOC (ENSSMRG00000007577) #11	GPATCH8 (ENSSMRG00000007576) #9	ITGA2B (ENSSMRG00000007556) #8	FAM171A2 (ENSSMRG00000007554) #7	GRN (ENSSMRG00000007548)	GJC1 (ENSSMRG00000007547) #15	HIGD1B (ENSSMRG00000007544) #16	EFTUD2 (ENSSMRG00000007533) #17	CCDC103 (ENSSMRG00000007518) #18	FAM187A (ENSSMRG00000007517) #20	ENSSMRG00000007515 #19	ENSSMRG00000007514 #19	KIF18B (ENSSMRG00000007494) #21	ENSSMRG00000007490	DCAKD (ENSSMRG00000007484) #24	NMT1 (ENSSMRG00000007478) #22	PLCD3 (ENSSMRG00000007473) #25	ACBD4 (ENSSMRG00000007467) #26	HEXIM1 (ENSSMRG00000007463) #27	CDK5R1 (ENSSMRG00000007462)	MYO1D (ENSSMRG00000007445)	ENSSMRG00000007441	MAP3K14 (ENSSMRG00000007427) #31	ENSSMRG00000007413 #29	ENSSMRG00000007401 #29	PSMD11 (ENSSMRG00000007369)	NSF (ENSSMRG00000007363)	WNT3 (ENSSMRG00000007358)	WNT9B (ENSSMRG00000007354)	GOSR2 (ENSSMRG00000007344)	ENSSMRG00000007343
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00940000161812 #10	ENSGT00960000189914	ENSGT00940000159523 #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000008812.b.b	ENSGT00940000157411	ENSGT00940000156497 #31	ENSGT00940000156292 #29	ENSGT00530000063301.a.a	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00940000166580	ENSGT00390000010523.c.a	ENSGT01090000259987.b.b.a.a.b.b
Elapidae	ANCESTRAL SPECIES	5	ENSGT00940000166913	ENSGT00940000161812 #10	ENSGT00960000189914	ENSGT00940000159523.m #9	ENSGT00940000160724 #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993.a #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000008812.b.b	ENSGT00940000157411	ENSGT00960000189239	ENSGT00940000156292 #29	ENSGT00530000063301.a.a.g	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00390000010523.c.a	ENSGT01090000259987.b.b.a.a.b.b	ENSGT00940000161358
Indian cobra	MODERN SPECIES	337	MEIOC (ENSNNAG00000011294) #11	ENSNNAG00000011358	FZD2 (ENSNNAG00000011375) #10	ENSNNAG00000011386 #9	ITGA2B (ENSNNAG00000011442) #8	FAM171A2 (ENSNNAG00000011549) #7	GRN (ENSNNAG00000011605)	GJC1 (ENSNNAG00000011678) #15	EFTUD2 (ENSNNAG00000011703) #17	CCDC103 (ENSNNAG00000011772) #18	FAM187A (ENSNNAG00000011784) #20	GFAP (ENSNNAG00000011806) #19	KIF18B (ENSNNAG00000011935) #21	ENSNNAG00000011994	DCAKD (ENSNNAG00000012007) #24	NMT1 (ENSNNAG00000012060) #22	PLCD3 (ENSNNAG00000007730) #25	ENSNNAG00000008203	ACBD4 (ENSNNAG00000008234) #26	ENSNNAG00000008283 #27	CDK5R1 (ENSNNAG00000008303)	MYO1D (ENSNNAG00000008313)	ENSNNAG00000008365	ENSNNAG00000008379	ENSNNAG00000008444	ENSNNAG00000008564	FMNL1 (ENSNNAG00000008635) #29	ENSNNAG00000009114	NSF (ENSNNAG00000009234)	WNT3 (ENSNNAG00000010341)	WNT9B (ENSNNAG00000010402)
Elapidae_a	ANCESTRAL SPECIES	81	ENSGT00940000166913	ENSGT00940000161812 #10	ENSGT00960000189914	ENSGT00940000159523.m #9	ENSGT00940000160724.f #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993.a #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000008812.b.b	ENSGT00940000157411	ENSGT00960000189239	ENSGT00940000156292 #29	ENSGT00530000063301.a.a.g	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00390000010523.c.a	ENSGT01090000259987.b.b.a.a.b.b	ENSGT00940000161358
Acanthophiinae	ANCESTRAL SPECIES	80	ENSGT00940000166913	ENSGT00940000161812 #10	ENSGT00960000189914	ENSGT00940000159523.m #9	ENSGT00940000160724.f #8	ENSGT00950000183184.b #7	ENSGT00470000042293.a.b	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000159539 #19	ENSGT00940000161200 #21	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993.a #25	ENSGT00940000160739 #26	ENSGT00390000002808.a #27	ENSGT00390000008812.b.b	ENSGT00940000157411	ENSGT00960000189239	ENSGT00940000156292 #29	ENSGT00530000063301.a.a.g	ENSGT00530000064085	ENSGT00940000157854	ENSGT00940000158599	ENSGT00950000183192.a.b	ENSGT00390000010523.c.a	ENSGT01090000259987.b.b.a.a.b.b	ENSGT00940000161358
Mainland tiger snake	MODERN SPECIES	200	ENSNSUG00000015587	FZD2 (ENSNSUG00000015588) #10	ENSNSUG00000015589	ENSNSUG00000015590 #9	ENSNSUG00000015591 #8	FAM171A2 (ENSNSUG00000015592) #7	GRN (ENSNSUG00000015594)	GJC1 (ENSNSUG00000015595) #15	EFTUD2 (ENSNSUG00000015598) #17	CCDC103 (ENSNSUG00000015799) #18	FAM187A (ENSNSUG00000015800) #20	GFAP (ENSNSUG00000015801) #19	KIF18B (ENSNSUG00000015831) #21	ENSNSUG00000015833	DCAKD (ENSNSUG00000015834) #24	NMT1 (ENSNSUG00000015850) #22	ENSNSUG00000015851 #25	ACBD4 (ENSNSUG00000015852) #26	HEXIM1 (ENSNSUG00000015853) #27	CDK5R1 (ENSNSUG00000015854)	MYO1D (ENSNSUG00000015855)
Eastern brown snake	MODERN SPECIES	103	CCDC43 (ENSPTXG00000009743) #12	ENSPTXG00000009741	FZD2 (ENSPTXG00000009740) #10	ENSPTXG00000009738 #9	ITGA2B (ENSPTXG00000009737) #8	FAM171A2 (ENSPTXG00000009734) #7	GRN (ENSPTXG00000009733)	GJC1 (ENSPTXG00000009732) #15	EFTUD2 (ENSPTXG00000009731) #17	CCDC103 (ENSPTXG00000009730) #18	FAM187A (ENSPTXG00000009729) #20	GFAP (ENSPTXG00000009728) #19	KIF18B (ENSPTXG00000009726) #21	ENSPTXG00000009725	DCAKD (ENSPTXG00000009724) #24	NMT1 (ENSPTXG00000009723) #22	PLCD3 (ENSPTXG00000009350) #25	ACBD4 (ENSPTXG00000009348) #26	HEXIM1 (ENSPTXG00000009347) #27	CDK5R1 (ENSPTXG00000009346)	MYO1D (ENSPTXG00000009322)	ENSPTXG00000009261	ENSPTXG00000009259	FMNL1 (ENSPTXG00000009247) #29	ENSPTXG00000009246	NSF (ENSPTXG00000009243)	WNT3 (ENSPTXG00000009242)	WNT9B (ENSPTXG00000009178)	GOSR2 (ENSPTXG00000009177)	RPRML (ENSPTXG00000009176)	ITGB3 (ENSPTXG00000009150)
Blue-lipped sea krait	MODERN SPECIES	8153																NMT1 (ENSLLTG00000015356) #22
Lizard	MODERN SPECIES	5	GPATCH8 (ENSACAG00000012522) #9	ENSACAG00000043811	ITGA2B (ENSACAG00000012258) #8	FAM171A2 (ENSACAG00000012203) #7	ENSACAG00000012130	ENSACAG00000012123 #15	HIGD1B (ENSACAG00000007850) #16	EFTUD2 (ENSACAG00000007637) #17	CCDC103 (ENSACAG00000007629) #18	FAM187A (ENSACAG00000007626) #20	GFAP (ENSACAG00000007521) #19	KIF18B (ENSACAG00000007486) #21	ENSACAG00000026826	ENSACAG00000042506	DCAKD (ENSACAG00000043260) #24	NMT1 (ENSACAG00000007348) #22	PLCD3 (ENSACAG00000007219) #25	ACBD4 (ENSACAG00000000928) #26	HEXIM1 (ENSACAG00000016321) #27	ENSACAG00000016324	ENSACAG00000038956	ENSACAG00000037089	ENSACAG00000016433 #31	ENSACAG00000016489 #29	ENSACAG00000016508	NSF (ENSACAG00000016584)	WNT3 (ENSACAG00000016642)	WNT9B (ENSACAG00000016690)	gosr2 (ENSACAG00000038661)	ENSACAG00000016739	RPRML (ENSACAG00000016741)
tuatara	MODERN SPECIES	886	CKS2 (ENSSPUG00000009611)	SECISBP2 (ENSSPUG00000009635)	SEMA4D (ENSSPUG00000009694)	GADD45G (ENSSPUG00000009715)	ENSSPUG00000009729	ENSSPUG00000009738 #14	ENSSPUG00000009746	ENSSPUG00000009852 #14	HIGD1B (ENSSPUG00000010237) #16	EFTUD2 (ENSSPUG00000010249) #17	CCDC103 (ENSSPUG00000010273) #18	GFAP (ENSSPUG00000010392) #19	KIF18B (ENSSPUG00000010421) #21	C1QL1 (ENSSPUG00000010445) #23	DCAKD (ENSSPUG00000010455) #24	NMT1 (ENSSPUG00000010483) #22	ACBD4 (ENSSPUG00000010548) #26	HEXIM1 (ENSSPUG00000010560) #27	HEXIM2 (ENSSPUG00000010568) #28	ENSSPUG00000010577	FMNL1 (ENSSPUG00000010606) #29	MAP3K14 (ENSSPUG00000010700) #31	MYO1D (ENSSPUG00000010727)	CDK5R1 (ENSSPUG00000010761)	PSMD11 (ENSSPUG00000010781)	ENSSPUG00000010849	NSF (ENSSPUG00000010869)	WNT3 (ENSSPUG00000010921)	WNT9B (ENSSPUG00000010932)	ENSSPUG00000010943
Anura	ANCESTRAL SPECIES	77	ENSGT00950000183184.b #7	ENSGT00940000160724 #8	ENSGT00940000159523 #9	ENSGT00940000161812 #10	ENSGT00390000003267 #11	ENSGT00390000015009 #12	ENSGT00530000063909.a #13	ENSGT00940000159790 #14	ENSGT01090000260005.a.a.a.b.a.a.b #15	ENSGT00940000161778 #16	ENSGT00940000155685 #17	ENSGT00390000004038 #18	ENSGT00530000063991.a #20	ENSGT00940000156913.a	ENSGT00550000075038 #24	ENSGT00390000017837.a #22	ENSGT00940000156993 #25	ENSGT00940000160739 #26	ENSGT00390000002808 #28	ENSGT00940000156292 #29	ENSGT00940000163949	ENSGT00940000156497 #31	ENSGT00940000157411	ENSGT00390000008812.b.b	ENSGT00530000063301.a.a
Frog	MODERN SPECIES	1	ENSXETG00000036396	limd2 (ENSXETG00000044990)	map3k3 (ENSXETG00000008257)	ENSXETG00000034821	taco1 (ENSXETG00000036516)	strada (ENSXETG00000003248)	znf451 (ENSXETG00000003247)	ccdc47 (ENSXETG00000003246)	ddx42 (ENSXETG00000003245)	crhr1.1 (ENSXETG00000003243)	myl4 (ENSXETG00000003242)	mapt (ENSXETG00000003240) #37	kansl1 (ENSXETG00000003239)	ENSXETG00000048843	cdc27 (ENSXETG00000003238)	nmt1 (ENSXETG00000003237) #22	plcd3 (ENSXETG00000003234) #25	acbd4 (ENSXETG00000033522) #26	ENSXETG00000040348	hexim1 (ENSXETG00000047472) #28	ENSXETG00000036785 #20	fmnl1 (ENSXETG00000003221) #29	mylkl (ENSXETG00000003217)	ENSXETG00000035184 #20	map3k14 (ENSXETG00000027243) #31	myo1d (ENSXETG00000003194)	cdk5r1 (ENSXETG00000044833)	psmd11 (ENSXETG00000029937)	dcakd (ENSXETG00000003179) #24	usf3 (ENSXETG00000003175)	ENSXETG00000046307
Leishan spiny toad	MODERN SPECIES	3	FZD2 (ENSLLEG00000025444) #10	MEIOC (ENSLLEG00000025373) #11	CCDC43 (ENSLLEG00000025044) #12	ENSLLEG00000024907 #13	ENSLLEG00000024883	ADAM11 (ENSLLEG00000024347) #14	GJC1 (ENSLLEG00000024297) #15	ENSLLEG00000024260	HIGD1B (ENSLLEG00000024212) #16	EFTUD2 (ENSLLEG00000023305) #17	CCDC103 (ENSLLEG00000023227) #18	FAM187A (ENSLLEG00000023133) #20	C1QL1 (ENSLLEG00000023093) #23	DCAKD (ENSLLEG00000023038) #24	ENSLLEG00000023022	NMT1 (ENSLLEG00000022651) #22	PLCD3 (ENSLLEG00000022382) #25	ENSLLEG00000022354	ACBD4 (ENSLLEG00000022082) #26	ENSLLEG00000022039 #28	ENSLLEG00000021773 #29	ENSLLEG00000021652	ENSLLEG00000021626	ENSLLEG00000021494 #31	MYO1D (ENSLLEG00000020914)	ENSLLEG00000020859	PSMD11 (ENSLLEG00000020400)	ENSLLEG00000020316	ENSLLEG00000020291	ENSLLEG00000020260	ENSLLEG00000020196