Tetrapoda	ANCESTRAL SPECIES	121									ENSGT00390000017728	ENSGT00940000160982	ENSGT00940000157664	ENSGT00940000163607	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A	ENSGT00940000157051	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT00390000014303	ENSGT00940000154732
Amniota	ANCESTRAL SPECIES	88														ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A	ENSGT00940000157051	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT00390000014303	ENSGT00940000154732
Mammalia	ANCESTRAL SPECIES	125							ENSGT00940000157051	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C
Theria	ANCESTRAL SPECIES	67												ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00940000157173
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259 #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b
Glires	ANCESTRAL SPECIES	9	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00860000135614	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00860000135614	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.i.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.c	ENSGT00950000183018.b.k.a.d
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	3	LPAR1 (ENSHGLG00000004534) #7	MUSK (ENSHGLG00000009128) #8	SVEP1 (ENSHGLG00000010868) #9	TXNDC8 (ENSHGLG00000011464) #10	ENSHGLG00000014576 #11	ENSHGLG00000042778 #12	C9orf152 (ENSHGLG00000032111) #13	ENSHGLG00000006234 #14	ENSHGLG00000047658 #15	PTPN3 (ENSHGLG00000004892) #16	ENSHGLG00000043831 #17	ENSHGLG00000008130 #18	EPB41L4B (ENSHGLG00000013577) #19	FRRS1L (ENSHGLG00000005022) #20	TMEM245 (ENSHGLG00000005520) #21	CTNNAL1 (ENSHGLG00000017742) #22	ABITRAM (ENSHGLG00000032426) #23	ELP1 (ENSHGLG00000005246) #24	ACTL7A (ENSHGLG00000020244) #25	ENSHGLG00000020431 #26	ENSHGLG00000045183 #27	ENSHGLG00000050898 #28	ENSHGLG00000048617 #29	ENSHGLG00000004266 #30	RAD23B (ENSHGLG00000050281) #31	ENSHGLG00000012147 #32	ZNF462 (ENSHGLG00000038476) #33	ENSHGLG00000035524 #34	TMEM38B (ENSHGLG00000046627) #35	TAL2 (ENSHGLG00000045987) #36	FKTN (ENSHGLG00000018225) #37
Naked mole-rat female	MODERN SPECIES	12	PRR29 (ENSHGLG00000044207)	ENSHGLG00000048527	ERN1 (ENSHGLG00000010207)	ENSHGLG00000043981	ENSHGLG00000008353	ENSHGLG00000042409	ENSHGLG00000038730	ENSHGLG00000007159	ENSHGLG00000006423	PLD6 (ENSHGLG00000034027)	COPS3 (ENSHGLG00000005522)	ENSHGLG00000037116	NT5M (ENSHGLG00000040322)	MED9 (ENSHGLG00000036371)	RASD1 (ENSHGLG00000045016)	ENSHGLG00000005018 ##22	PEMT (ENSHGLG00000039640)	SREBF1 (ENSHGLG00000019114)	TOM1L2 (ENSHGLG00000006729)	DRC3 (ENSHGLG00000018357)	ATPAF2 (ENSHGLG00000018914)	GID4 (ENSHGLG00000047412)	DRG2 (ENSHGLG00000010347)	ALKBH5 (ENSHGLG00000032335)	ENSHGLG00000041074	ENSHGLG00000005846	ENSHGLG00000042355	SMCR8 (ENSHGLG00000003487)	ENSHGLG00000017898	ENSHGLG00000043308	GOSR2 (ENSHGLG00000013395)
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.i.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.c	ENSGT00950000183018.b.k.a.d
Guinea pig	MODERN SPECIES	93	ZNF483 (ENSCPOG00000004672)	ECPAS (ENSCPOG00000008831)	OR2K2 (ENSCPOG00000000722)	LPAR1 (ENSCPOG00000008205) #7	MUSK (ENSCPOG00000013075) #8	SVEP1 (ENSCPOG00000011771) #9	ENSCPOG00000011769	ENSCPOG00000015348 ##11	C9orf152 (ENSCPOG00000033572) #13	PALM2AKAP2 (ENSCPOG00000023281)	ENSCPOG00000040438 #14	PTPN3 (ENSCPOG00000009847) #16	EPB41L4B (ENSCPOG00000009831) #19	FRRS1L (ENSCPOG00000009827) #20	TMEM245 (ENSCPOG00000005940) #21	CTNNAL1 (ENSCPOG00000005930) #22	ABITRAM (ENSCPOG00000005927) #23	ELP1 (ENSCPOG00000005907) #24	ACTL7A (ENSCPOG00000005906) #25	ACTL7B (ENSCPOG00000005904) #26	KLF4 (ENSCPOG00000027434) #30
Hystricomorpha_b	ANCESTRAL SPECIES	11	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.i.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.d	ENSGT01040000240406.A.b.a.b	ENSGT01040000240406.A.b.a.a.a.a.b	ENSGT00940000162868
Long-tailed chinchilla	MODERN SPECIES	126	PTGR1 (ENSCLAG00000011342)	ZNF483 (ENSCLAG00000009553)	ECPAS (ENSCLAG00000013423)	LPAR1 (ENSCLAG00000013205) #7	MUSK (ENSCLAG00000013081) #8	SVEP1 (ENSCLAG00000016989) #9	ENSCLAG00000011282 #10	TXN (ENSCLAG00000012680) #11	C9orf152 (ENSCLAG00000013271) #13	PALM2AKAP2 (ENSCLAG00000012201)	ENSCLAG00000013097 #14	PTPN3 (ENSCLAG00000014274) #16	EPB41L4B (ENSCLAG00000013753) #19	FRRS1L (ENSCLAG00000011370) #20	TMEM245 (ENSCLAG00000016549) #21	CTNNAL1 (ENSCLAG00000012596) #22	ABITRAM (ENSCLAG00000014447) #23	ELP1 (ENSCLAG00000015454) #24	ACTL7A (ENSCLAG00000010320) #25	ACTL7B (ENSCLAG00000017861) #26	KLF4 (ENSCLAG00000010034) #30	RAD23B (ENSCLAG00000010897) #31	ENSCLAG00000011424	ZNF462 (ENSCLAG00000016925) #33	TMEM38B (ENSCLAG00000014738) #35	TAL2 (ENSCLAG00000012271) #36	FKTN (ENSCLAG00000010039) #37	FSD1L (ENSCLAG00000010824)	SLC44A1 (ENSCLAG00000015036)	ABCA1 (ENSCLAG00000015148)	ENSCLAG00000012516
Degu	MODERN SPECIES	135		ENSODEG00000005379 #7	ENSODEG00000005183	MUSK (ENSODEG00000004445) #8	SVEP1 (ENSODEG00000005675) #9	ENSODEG00000005307 #10	ENSODEG00000004871 ##11	C9orf152 (ENSODEG00000006257) #13	ENSODEG00000019276	PALM2AKAP2 (ENSODEG00000005862)	ENSODEG00000004789 #14	PTPN3 (ENSODEG00000004452) #16	EPB41L4B (ENSODEG00000004839) #19	FRRS1L (ENSODEG00000004637) #20	TMEM245 (ENSODEG00000004253) #21	CTNNAL1 (ENSODEG00000004314) #22	ABITRAM (ENSODEG00000004189) #23	ELP1 (ENSODEG00000004049) #24	ACTL7A (ENSODEG00000019643) #25	ACTL7B (ENSODEG00000019638) #26	ENSODEG00000019579	ENSODEG00000019543	ENSODEG00000006716 #30	ENSODEG00000006336 #31	ENSODEG00000006058	ZNF462 (ENSODEG00000005606) #33	ENSODEG00000019163	TMEM38B (ENSODEG00000005342) #35	TAL2 (ENSODEG00000019145) #36	ENSODEG00000005239 #37	FSD1L (ENSODEG00000004623)
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.k.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.f
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.k.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.f
Alpin marmot	MODERN SPECIES	30	ECPAS (ENSMMMG00000002448)	OR2K2 (ENSMMMG00000002527)	ENSMMMG00000002533	LPAR1 (ENSMMMG00000002543) #7	MUSK (ENSMMMG00000002586) #8	SVEP1 (ENSMMMG00000002738) #9	ENSMMMG00000002813 #10	ENSMMMG00000002832 #11	C9orf152 (ENSMMMG00000002844) #13	PALM2AKAP2 (ENSMMMG00000002857)	ENSMMMG00000002899 #14	PTPN3 (ENSMMMG00000002921) #16	ENSMMMG00000002970	EPB41L4B (ENSMMMG00000002983) #19	TMEM245 (ENSMMMG00000003081) #21	CTNNAL1 (ENSMMMG00000003185) #22	ABITRAM (ENSMMMG00000003209) #23	ELP1 (ENSMMMG00000003220) #24	ACTL7A (ENSMMMG00000003313) #25	ACTL7B (ENSMMMG00000003319) #26	ENSMMMG00000003324	KLF4 (ENSMMMG00000003350) #30	RAD23B (ENSMMMG00000003374) #31	ZNF462 (ENSMMMG00000003379) #33	TMEM38B (ENSMMMG00000003426) #35	TAL2 (ENSMMMG00000003441) #36	FKTN (ENSMMMG00000003443) #37	FSD1L (ENSMMMG00000003486)	SLC44A1 (ENSMMMG00000003596)	ABCA1 (ENSMMMG00000003761)	ENSMMMG00000003848
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.k.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Squirrel	MODERN SPECIES	159	ENSSTOG00000004339	LPAR1 (ENSSTOG00000020173) #7	MUSK (ENSSTOG00000002341) #8	SVEP1 (ENSSTOG00000009095) #9	ENSSTOG00000034967	ENSSTOG00000029884	TXN (ENSSTOG00000020668) #11	C9orf152 (ENSSTOG00000022259) #13	PALM2AKAP2 (ENSSTOG00000015218)	ENSSTOG00000022838 #14	PTPN3 (ENSSTOG00000007885) #16	ENSSTOG00000030241	EPB41L4B (ENSSTOG00000012217) #19	FRRS1L (ENSSTOG00000025868) #20	TMEM245 (ENSSTOG00000029136) #21	CTNNAL1 (ENSSTOG00000006488) #22	ABITRAM (ENSSTOG00000027231) #23	ELP1 (ENSSTOG00000006416) #24	ACTL7A (ENSSTOG00000006402) #25	ACTL7B (ENSSTOG00000006395) #26	KLF4 (ENSSTOG00000022002) #30	RAD23B (ENSSTOG00000022304) #31	ZNF462 (ENSSTOG00000027654) #33	TMEM38B (ENSSTOG00000003014) #35	TAL2 (ENSSTOG00000026950) #36	FKTN (ENSSTOG00000010262) #37	FSD1L (ENSSTOG00000004888)	SLC44A1 (ENSSTOG00000012382)	ABCA1 (ENSSTOG00000001252)	ENSSTOG00000027151	ENSSTOG00000001248
Arctic ground squirrel	MODERN SPECIES	85	OR2K2 (ENSUPAG00010009243)	LPAR1 (ENSUPAG00010009226) #7	MUSK (ENSUPAG00010009107) #8	SVEP1 (ENSUPAG00010009016) #9	ENSUPAG00010008999 #10	ENSUPAG00010008988	ENSUPAG00010008976 #11	C9orf152 (ENSUPAG00010008969) #13	PALM2AKAP2 (ENSUPAG00010008942)	ENSUPAG00010008929 #14	ENSUPAG00010008928	PTPN3 (ENSUPAG00010008791) #16	EPB41L4B (ENSUPAG00010008702) #19	FRRS1L (ENSUPAG00010008695) #20	TMEM245 (ENSUPAG00010008594) #21	CTNNAL1 (ENSUPAG00010008529) #22	ABITRAM (ENSUPAG00010008522) #23	ELP1 (ENSUPAG00010008488) #24	ACTL7A (ENSUPAG00010008484) #25	ENSUPAG00010008478	ACTL7B (ENSUPAG00010008470) #26	KLF4 (ENSUPAG00010008462) #30	RAD23B (ENSUPAG00010008451) #31	ZNF462 (ENSUPAG00010008409) #33
Eurasian red squirrel	MODERN SPECIES	6	ENSSVLG00005016829	ENSSVLG00005016816	FHL1 (ENSSVLG00005016764)	LPAR1 (ENSSVLG00005016716) #7	MUSK (ENSSVLG00005016215) #8	ENSSVLG00005016135	SVEP1 (ENSSVLG00005016056) #9	ENSSVLG00005015870 #10	ENSSVLG00005015761 #11	C9orf152 (ENSSVLG00005015706) #13	PALM2AKAP2 (ENSSVLG00005015453)	PTPN3 (ENSSVLG00005015106) #16	EPB41L4B (ENSSVLG00005014589) #19	FRRS1L (ENSSVLG00005014483) #20	TMEM245 (ENSSVLG00005014297) #21	CTNNAL1 (ENSSVLG00005014145) #22	ABITRAM (ENSSVLG00005014070) #23	ELP1 (ENSSVLG00005013963) #24	ACTL7A (ENSSVLG00005013866) #25	ACTL7B (ENSSVLG00005013848) #26	ENSSVLG00005013747	KLF4 (ENSSVLG00005013642) #30	ENSSVLG00005013612 #31	ZNF462 (ENSSVLG00005013554) #33	ENSSVLG00005013378	TMEM38B (ENSSVLG00005013327) #35	TAL2 (ENSSVLG00005013299) #36	FKTN (ENSSVLG00005013173) #37	FSD1L (ENSSVLG00005023494)	ENSSVLG00005023457	SLC44A1 (ENSSVLG00005023410)
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a
Kangaroo rat	MODERN SPECIES	386	Ptgr1 (ENSDORG00000002456)	Zkscan16 (ENSDORG00000015480)	ENSDORG00000013677	Lpar1 (ENSDORG00000016253) #7	Musk (ENSDORG00000011874) #8	Svep1 (ENSDORG00000012431) #9	Txndc8 (ENSDORG00000012430) #10	Txn1 (ENSDORG00000026523) #11	D630039A03Rik (ENSDORG00000024588) #13	Pakap (ENSDORG00000005841)	Pakap (ENSDORG00000025248) #14	ENSDORG00000000786 #16	Epb41l4b (ENSDORG00000012315) #19	Frrs1l (ENSDORG00000012313) #20	Tmem245 (ENSDORG00000012310) #21	Ctnnal1 (ENSDORG00000008619) #22	Abitram (ENSDORG00000008618) #23	Elp1 (ENSDORG00000008614) #24	Actl7a (ENSDORG00000008612) #25	Actl7b (ENSDORG00000008610) #26	ENSDORG00000026534 #30	Rad23b (ENSDORG00000006946) #31	Zfp462 (ENSDORG00000025368) #33	Tmem38b (ENSDORG00000011779) #35	Tal2 (ENSDORG00000012882) #36	Fktn (ENSDORG00000012880) #37	Fsd1l (ENSDORG00000012878)	Slc44a1 (ENSDORG00000009386)	Abca1 (ENSDORG00000000957)	ENSDORG00000000955	ENSDORG00000004991
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Upper Galilee mountains blind mole rat	MODERN SPECIES	1696						Svep1 (ENSNGAG00000013510) #9	Txndc8 (ENSNGAG00000006645) #10	Txn1 (ENSNGAG00000019492) #11	D630039A03Rik (ENSNGAG00000020407) #13	Pakap (ENSNGAG00000002382)	Pakap (ENSNGAG00000004186) #14	Ptpn3 (ENSNGAG00000013494) #16	Epb41l4b (ENSNGAG00000010878) #19	Frrs1l (ENSNGAG00000005746) #20	Tmem245 (ENSNGAG00000019552) #21	Ctnnal1 (ENSNGAG00000018021) #22	Abitram (ENSNGAG00000019471) #23	Elp1 (ENSNGAG00000008235) #24	Actl7a (ENSNGAG00000006112) #25	Actl7b (ENSNGAG00000005911) #26	Klf4 (ENSNGAG00000014416) #30	Rad23b (ENSNGAG00000019280) #31	ENSNGAG00000017649	Zfp462 (ENSNGAG00000019541) #33	ENSNGAG00000002351	ENSNGAG00000007426	Tmem38b (ENSNGAG00000020880) #35	Tal2 (ENSNGAG00000002061) #36	Fktn (ENSNGAG00000003096) #37	Fsd1l (ENSNGAG00000007353)
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Northern American deer mouse	MODERN SPECIES	11	Zkscan16 (ENSPEMG00000013898)	Ecpas (ENSPEMG00000003219)	Or2k2 (ENSPEMG00000000791)	Lpar1 (ENSPEMG00000021318) #7	Musk (ENSPEMG00000021824) #8	Svep1 (ENSPEMG00000022667) #9	Txndc8 (ENSPEMG00000021665) #10	Txn1 (ENSPEMG00000022087) #11	D630039A03Rik (ENSPEMG00000025754) #13	Pakap (ENSPEMG00000013487)	Pakap (ENSPEMG00000021128) #14	Ptpn3 (ENSPEMG00000021519) #16	Epb41l4b (ENSPEMG00000022016) #19	Frrs1l (ENSPEMG00000021316) #20	Tmem245 (ENSPEMG00000021143) #21	Ctnnal1 (ENSPEMG00000003592) #22	Abitram (ENSPEMG00000023184) #23	Elp1 (ENSPEMG00000020948) #24	Actl7a (ENSPEMG00000004746) #25	ENSPEMG00000027769	Actl7b (ENSPEMG00000002319) #26	ENSPEMG00000028786	Klf4 (ENSPEMG00000020552) #30	Rad23b (ENSPEMG00000009532) #31	ENSPEMG00000022238	Zfp462 (ENSPEMG00000001794) #33	Tmem38b (ENSPEMG00000017137) #35	Tal2 (ENSPEMG00000030662) #36	ENSPEMG00000029455	Fktn (ENSPEMG00000026889) #37	Fsd1l (ENSPEMG00000017531)
Prairie vole	MODERN SPECIES	355	Ecpas (ENSMOCG00000020767)	Or2k2 (ENSMOCG00000006465)	ENSMOCG00000001270	Lpar1 (ENSMOCG00000021694) #7	Musk (ENSMOCG00000013873) #8	Svep1 (ENSMOCG00000006851) #9	Txndc8 (ENSMOCG00000009554) #10	Txn1 (ENSMOCG00000002238) #11	D630039A03Rik (ENSMOCG00000013462) #13	Pakap (ENSMOCG00000022251)	Pakap (ENSMOCG00000013326) #14	Ptpn3 (ENSMOCG00000016235) #16	Epb41l4b (ENSMOCG00000019884) #19	Frrs1l (ENSMOCG00000004197) #20	Tmem245 (ENSMOCG00000017257) #21	Ctnnal1 (ENSMOCG00000020856) #22	Abitram (ENSMOCG00000022237) #23	Elp1 (ENSMOCG00000019756) #24	Actl7a (ENSMOCG00000002715) #25	Actl7b (ENSMOCG00000003121) #26	Klf4 (ENSMOCG00000018993) #30	Rad23b (ENSMOCG00000012021) #31	Zfp462 (ENSMOCG00000014957) #33	ENSMOCG00000020459	Tmem38b (ENSMOCG00000017340) #35	Tal2 (ENSMOCG00000003929) #36	Fktn (ENSMOCG00000022995) #37	Fsd1l (ENSMOCG00000022827)	Slc44a1 (ENSMOCG00000010191)	Abca1 (ENSMOCG00000012458)	ENSMOCG00000011792
Cricetinae	ANCESTRAL SPECIES	21	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00860000135614	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Chinese hamster chok1gshd	MODERN SPECIES	111	Or2k2 (ENSCGRG00001005176)	Lpar1 (ENSCGRG00001010608) #7	Musk (ENSCGRG00001014907) #8	Svep1 (ENSCGRG00001018972) #9	ENSCGRG00001009840	Txndc8 (ENSCGRG00001010737) #10	ENSCGRG00001003261	Txn1 (ENSCGRG00001007919) #11	D630039A03Rik (ENSCGRG00001001444) #13	Pakap (ENSCGRG00001008014)	Pakap (ENSCGRG00001013485) #14	Ptpn3 (ENSCGRG00001015039) #16	Epb41l4b (ENSCGRG00001011607) #19	Frrs1l (ENSCGRG00001014472) #20	Tmem245 (ENSCGRG00001019702) #21	Ctnnal1 (ENSCGRG00001011240) #22	Abitram (ENSCGRG00001017133) #23	Elp1 (ENSCGRG00001021382) #24	Actl7a (ENSCGRG00001003974) #25	Actl7b (ENSCGRG00001005608) #26	ENSCGRG00001006974	Klf4 (ENSCGRG00001024655) #30	Rad23b (ENSCGRG00001011735) #31	Zfp462 (ENSCGRG00001014412) #33	Tmem38b (ENSCGRG00001023625) #35	Tal2 (ENSCGRG00001005967) #36	Fktn (ENSCGRG00001011241) #37	Fsd1l (ENSCGRG00001014042)	ENSCGRG00001017025	Slc44a1 (ENSCGRG00001023017)	Abca1 (ENSCGRG00001017941)
Golden Hamster	MODERN SPECIES	680														Frrs1l (ENSMAUG00000016371) #20	Tmem245 (ENSMAUG00000000881) #21	ENSMAUG00000019791 #22	Abitram (ENSMAUG00000015969) #23	Actl7a (ENSMAUG00000005039) #25	Actl7b (ENSMAUG00000006243) #26	Klf4 (ENSMAUG00000007972) #30	Rad23b (ENSMAUG00000018694) #31	Zfp462 (ENSMAUG00000018357) #33	ENSMAUG00000012414	Tmem38b (ENSMAUG00000012115) #35	Tal2 (ENSMAUG00000008050) #36	Fktn (ENSMAUG00000017242) #37	Fsd1l (ENSMAUG00000015803)	Slc44a1 (ENSMAUG00000013862)	Abca1 (ENSMAUG00000014255)	Nipsnap3b (ENSMAUG00000013369)	Nipsnap3a (ENSMAUG00000000390)
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Rat	MODERN SPECIES	15	Zfp483 (ENSRNOG00000014975)	Ndufa5-ps4 (ENSRNOG00000014899)	Ecpas (ENSRNOG00000025076)	Or2k2 (ENSRNOG00000014263)	Lpar1 (ENSRNOG00000013656) #7	Musk (ENSRNOG00000033567) #8	Svep1 (ENSRNOG00000033110) #9	Txndc8 (ENSRNOG00000029073) #10	Txn1 (ENSRNOG00000012081) #11	C5h9orf152 (ENSRNOG00000012068) #13	Akap2 (ENSRNOG00000011504)	Ptpn3 (ENSRNOG00000011425) #16	Epb41l4b (ENSRNOG00000056550) #19	Frrs1l (ENSRNOG00000043103) #20	Tmem245 (ENSRNOG00000026271) #21	Ctnnal1 (ENSRNOG00000010593) #22	Abitram (ENSRNOG00000010532) #23	Elp1 (ENSRNOG00000016725) #24	Actl7a (ENSRNOG00000016641) #25	Actl7b (ENSRNOG00000016621) #26	AABR07048312.1 (ENSRNOG00000029600)	Klf4 (ENSRNOG00000016299) #30	Rad23b (ENSRNOG00000016137) #31	ENSRNOG00000063835	ENSRNOG00000066746	ENSRNOG00000067901	Zfp462 (ENSRNOG00000032048) #33	LOC120103152 (ENSRNOG00000034161)	ENSRNOG00000065525	LOC685311 (ENSRNOG00000065946)	RGD1564956 (ENSRNOG00000017640)
Mus	ANCESTRAL SPECIES	3	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Shrew mouse	MODERN SPECIES	19	Ecpas (MGP_PahariEiJ_G0028392)	Or2k2 (MGP_PahariEiJ_G0028391)	Lpar1 (MGP_PahariEiJ_G0028390) #7	Musk (MGP_PahariEiJ_G0028389) #8	Svep1 (MGP_PahariEiJ_G0028388) #9	Txndc8 (MGP_PahariEiJ_G0028387) #10	Txn1 (MGP_PahariEiJ_G0028386) #11	D630039A03Rik (MGP_PahariEiJ_G0028385) #13	MGP_PahariEiJ_G0028384	MGP_PahariEiJ_G0028383	Pakap (MGP_PahariEiJ_G0028382) #14	Ptpn3 (MGP_PahariEiJ_G0028381) #16	Epb41l4b (MGP_PahariEiJ_G0028380) #19	Frrs1l (MGP_PahariEiJ_G0028379) #20	Tmem245 (MGP_PahariEiJ_G0028378) #21	Ctnnal1 (MGP_PahariEiJ_G0028377) #22	Abitram (MGP_PahariEiJ_G0028376) #23	Elp1 (MGP_PahariEiJ_G0028375) #24	Actl7a (MGP_PahariEiJ_G0028374) #25	MGP_PahariEiJ_G0028373	Actl7b (MGP_PahariEiJ_G0028372) #26	MGP_PahariEiJ_G0028371 #30	Rad23b (MGP_PahariEiJ_G0028370) #31	Zfp462 (MGP_PahariEiJ_G0028369) #33	Tmem38b (MGP_PahariEiJ_G0028368) #35	Tal2 (MGP_PahariEiJ_G0028367) #36	Fktn (MGP_PahariEiJ_G0028366) #37	Fsd1l (MGP_PahariEiJ_G0028365)	Slc44a1 (MGP_PahariEiJ_G0028364)	Abca1 (MGP_PahariEiJ_G0028363)	Nipsnap3b (MGP_PahariEiJ_G0028362)
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Ryukyu mouse	MODERN SPECIES	13	Ecpas (MGP_CAROLIEiJ_G0026054)	Or2k2 (MGP_CAROLIEiJ_G0026053)	Lpar1 (MGP_CAROLIEiJ_G0026052) #7	Musk (MGP_CAROLIEiJ_G0026051) #8	Svep1 (MGP_CAROLIEiJ_G0026050) #9	MGP_CAROLIEiJ_G0026049	Txn1 (MGP_CAROLIEiJ_G0026048) #11	D630039A03Rik (MGP_CAROLIEiJ_G0026047) #13	MGP_CAROLIEiJ_G0026046	MGP_CAROLIEiJ_G0026045	Pakap (MGP_CAROLIEiJ_G0026044) #14	Ptpn3 (MGP_CAROLIEiJ_G0026043) #16	Epb41l4b (MGP_CAROLIEiJ_G0026042) #19	Frrs1l (MGP_CAROLIEiJ_G0026041) #20	Tmem245 (MGP_CAROLIEiJ_G0026040) #21	Ctnnal1 (MGP_CAROLIEiJ_G0026039) #22	Abitram (MGP_CAROLIEiJ_G0026038) #23	Elp1 (MGP_CAROLIEiJ_G0026037) #24	MGP_CAROLIEiJ_G0026036 #26	Klf4 (MGP_CAROLIEiJ_G0026035) #30	Rad23b (MGP_CAROLIEiJ_G0026034) #31	MGP_CAROLIEiJ_G0026033 #33	Tmem38b (MGP_CAROLIEiJ_G0026032) #35	Tal2 (MGP_CAROLIEiJ_G0026031) #36	Fktn (MGP_CAROLIEiJ_G0026030) #37	Fsd1l (MGP_CAROLIEiJ_G0026029)	Slc44a1 (MGP_CAROLIEiJ_G0026028)	Abca1 (MGP_CAROLIEiJ_G0026027)	Nipsnap3b (MGP_CAROLIEiJ_G0026026)	Nipsnap3a (MGP_CAROLIEiJ_G0026025)	Or13d1 (MGP_CAROLIEiJ_G0026024)
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
Mouse	MODERN SPECIES	13	Ecpas (ENSMUSG00000050812)	Or2k2 (ENSMUSG00000043385)	Lpar1 (ENSMUSG00000038668) #7	Musk (ENSMUSG00000057280) #8	Svep1 (ENSMUSG00000028369) #9	Txndc8 (ENSMUSG00000038709) #10	Txn1 (ENSMUSG00000028367) #11	D630039A03Rik (ENSMUSG00000052117) #13	Pakap (ENSMUSG00000038729)	Pakap (ENSMUSG00000089945)	Pakap (ENSMUSG00000090053) #14	Ptpn3 (ENSMUSG00000038764) #16	Epb41l4b (ENSMUSG00000028434) #19	Frrs1l (ENSMUSG00000045589) #20	Tmem245 (ENSMUSG00000055296) #21	Ctnnal1 (ENSMUSG00000038816) #22	Abitram (ENSMUSG00000038827) #23	Elp1 (ENSMUSG00000028431) #24	Actl7a (ENSMUSG00000070979) #25	Actl7b (ENSMUSG00000070980) #26	Klf4 (ENSMUSG00000003032) #30	Rad23b (ENSMUSG00000028426) #31	Zfp462 (ENSMUSG00000060206) #33	Tmem38b (ENSMUSG00000028420) #35	Tal2 (ENSMUSG00000028417) #36	Fktn (ENSMUSG00000028414) #37	Fsd1l (ENSMUSG00000054752)	Slc44a1 (ENSMUSG00000028412)	Abca1 (ENSMUSG00000015243)	Nipsnap3b (ENSMUSG00000015247)	Nipsnap3a (ENSMUSG00000015242)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00860000135614	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a
spretus	MODERN SPECIES	13	Ecpas (MGP_SPRETEiJ_G0027019)	Or2k2 (MGP_SPRETEiJ_G0027018)	MGP_SPRETEiJ_G0027017	Musk (MGP_SPRETEiJ_G0027016) #8	Svep1 (MGP_SPRETEiJ_G0027015) #9	Txndc8 (MGP_SPRETEiJ_G0027014) #10	Txn1 (MGP_SPRETEiJ_G0027013) #11	D630039A03Rik (MGP_SPRETEiJ_G0027012) #13	MGP_SPRETEiJ_G0027011	MGP_SPRETEiJ_G0027010	Pakap (MGP_SPRETEiJ_G0027009) #14	MGP_SPRETEiJ_G0027008 #16	Epb41l4b (MGP_SPRETEiJ_G0027007) #19	Frrs1l (MGP_SPRETEiJ_G0027006) #20	Tmem245 (MGP_SPRETEiJ_G0027005) #21	MGP_SPRETEiJ_G0027004 #22	Abitram (MGP_SPRETEiJ_G0027003) #23	Elp1 (MGP_SPRETEiJ_G0027002) #24	Actl7a (MGP_SPRETEiJ_G0027001) #25	MGP_SPRETEiJ_G0027000	Actl7b (MGP_SPRETEiJ_G0026999) #26	Klf4 (MGP_SPRETEiJ_G0026998) #30	Rad23b (MGP_SPRETEiJ_G0026997) #31	Zfp462 (MGP_SPRETEiJ_G0026996) #33	MGP_SPRETEiJ_G0026995	Tal2 (MGP_SPRETEiJ_G0026994) #36	Fktn (MGP_SPRETEiJ_G0026993) #37	Fsd1l (MGP_SPRETEiJ_G0026992)	Slc44a1 (MGP_SPRETEiJ_G0026991)	Abca1 (MGP_SPRETEiJ_G0026990)	Nipsnap3b (MGP_SPRETEiJ_G0026989)
Steppe mouse	MODERN SPECIES	3315												Ptpn3 (ENSMSIG00000006824) #16	Epb41l4b (ENSMSIG00000006766) #19	Frrs1l (ENSMSIG00000006753) #20	Tmem245 (ENSMSIG00000006575) #21	Ctnnal1 (ENSMSIG00000006477) #22	Abitram (ENSMSIG00000006443) #23	Elp1 (ENSMSIG00000006298) #24	Actl7a (ENSMSIG00000006279) #25	ENSMSIG00000006276	Actl7b (ENSMSIG00000006268) #26	ENSMSIG00000006203	Klf4 (ENSMSIG00000006179) #30	Rad23b (ENSMSIG00000006092) #31	ENSMSIG00000006075	ENSMSIG00000006068	Zfp462 (ENSMSIG00000005905) #33	Tmem38b (ENSMSIG00000005837) #35	ENSMSIG00000005822	Tal2 (ENSMSIG00000005813) #36	Fktn (ENSMSIG00000005717) #37
Lesser Egyptian jerboa	MODERN SPECIES	61	ENSJJAG00000010686	Lpar1 (ENSJJAG00000017163) #7	Musk (ENSJJAG00000022339) #8	ENSJJAG00000014547	Svep1 (ENSJJAG00000012603) #9	Txndc8 (ENSJJAG00000000349) #10	Txn1 (ENSJJAG00000000678) #11	D630039A03Rik (ENSJJAG00000018502) #13	Pakap (ENSJJAG00000010638)	Pakap (ENSJJAG00000006113) #14	Ptpn3 (ENSJJAG00000005406) #16	Epb41l4b (ENSJJAG00000002838) #19	Frrs1l (ENSJJAG00000017072) #20	ENSJJAG00000014563 #21	ENSJJAG00000017880 #21	Ctnnal1 (ENSJJAG00000005394) #22	Abitram (ENSJJAG00000024119) #23	Elp1 (ENSJJAG00000022600) #24	Actl7a (ENSJJAG00000006797) #25	Actl7b (ENSJJAG00000006166) #26	ENSJJAG00000001377	ENSJJAG00000023460 #30	Rad23b (ENSJJAG00000018297) #31	Zfp462 (ENSJJAG00000017478) #33	Tmem38b (ENSJJAG00000017610) #35	ENSJJAG00000012167	Tal2 (ENSJJAG00000007872) #36	Fktn (ENSJJAG00000018854) #37	Fsd1l (ENSJJAG00000020333)	Slc44a1 (ENSJJAG00000012770)	ENSJJAG00000007650
Lagomorpha	ANCESTRAL SPECIES	16	ENSGT00940000154810	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.h #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.k #31	ENSGT00940000156411 #33	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.b
Rabbit	MODERN SPECIES		ENSOCUG00000030397	ECPAS (ENSOCUG00000004268)	ENSOCUG00000036935	LPAR1 (ENSOCUG00000026842) #7	MUSK (ENSOCUG00000017885) #8	SVEP1 (ENSOCUG00000016227) #9	ENSOCUG00000029370 #10	TXN (ENSOCUG00000030643) #11	C9orf152 (ENSOCUG00000025279) #13	ENSOCUG00000025387 #14	PTPN3 (ENSOCUG00000001034) #16	ENSOCUG00000039438	EPB41L4B (ENSOCUG00000016177) #19	FRRS1L (ENSOCUG00000014570) #20	TMEM245 (ENSOCUG00000001887) #21	CTNNAL1 (ENSOCUG00000022183) #22	ABITRAM (ENSOCUG00000001882) #23	ELP1 (ENSOCUG00000001868) #24	ACTL7A (ENSOCUG00000011656) #25	ACTL7B (ENSOCUG00000015782) #26	ENSOCUG00000036004	ENSOCUG00000031317	ENSOCUG00000005904 #30	RAD23B (ENSOCUG00000007316) #31	ZNF462 (ENSOCUG00000012546) #33	FKTN (ENSOCUG00000005809) #37	TAL2 (ENSOCUG00000038140) #36	FSD1L (ENSOCUG00000023297)	SLC44A1 (ENSOCUG00000005946)	NIPSNAP3A (ENSOCUG00000007880)	ABCA1 (ENSOCUG00000009279)
Pika	MODERN SPECIES	2065							SVEP1 (ENSOPRG00000013832) #9	TXNDC8 (ENSOPRG00000013819) #10	TXN (ENSOPRG00000013805) #11	C9orf152 (ENSOPRG00000013799) #13	PALM2AKAP2 (ENSOPRG00000013775)	PTPN3 (ENSOPRG00000013741) #16	EPB41L4B (ENSOPRG00000013700) #19	FRRS1L (ENSOPRG00000013686) #20	TMEM245 (ENSOPRG00000013644) #21	CTNNAL1 (ENSOPRG00000013604) #22	ABITRAM (ENSOPRG00000013588) #23	ELP1 (ENSOPRG00000013519) #24	ACTL7B (ENSOPRG00000013495) #26
Tree shrew	MODERN SPECIES	1726															ENSTBEG00000005637 #21	CTNNAL1 (ENSTBEG00000005204) #22	ABITRAM (ENSTBEG00000004984) #23	ELP1 (ENSTBEG00000004131) #24
Primates	ANCESTRAL SPECIES	9	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Tarsier	MODERN SPECIES	7037												PTPN3 (ENSTSYG00000007198) #16	EPB41L4B (ENSTSYG00000000137) #19	FRRS1L (ENSTSYG00000000247) #20	TMEM245 (ENSTSYG00000005554) #21	CTNNAL1 (ENSTSYG00000009255) #22	FAM206A (ENSTSYG00000009241) #23	ELP1 (ENSTSYG00000009218) #24	PTGS2 (ENSTSYG00000012389)	PDC (ENSTSYG00000003238)	CUNH1orf27 (ENSTSYG00000011439)	TPR (ENSTSYG00000011405)	ENSTSYG00000026550	HMCN1 (ENSTSYG00000012240)	ENSTSYG00000033615
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.a.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.a.b ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.u #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.a.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.a.b ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.u #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Marmoset	MODERN SPECIES		OR2K2 (ENSCJAG00000017494)	ENSCJAG00000084240	ENSCJAG00000087206	LPAR1 (ENSCJAG00000017478) #7	MUSK (ENSCJAG00000017434) #8	ENSCJAG00000070199	SVEP1 (ENSCJAG00000017337) #9	TXN (ENSCJAG00000017321) ##11	C9orf152 (ENSCJAG00000078080) #13	PALM2AKAP2 (ENSCJAG00000048660)	PTPN3 (ENSCJAG00000017223) #16	EPB41L4B (ENSCJAG00000017184) #19	FRRS1L (ENSCJAG00000017183) #20	ENSCJAG00000082132	TMEM245 (ENSCJAG00000017154) #21	CTNNAL1 (ENSCJAG00000017065) #22	ABITRAM (ENSCJAG00000038185) #23	ENSCJAG00000016966 #24	ENSCJAG00000086076 #25	ACTL7B (ENSCJAG00000047256) #26	ENSCJAG00000082635	ENSCJAG00000085762	ENSCJAG00000022553	ENSCJAG00000080939	ENSCJAG00000078202	KLF4 (ENSCJAG00000016955) #30	ENSCJAG00000016908 #31	ENSCJAG00000080716	ZNF462 (ENSCJAG00000016879) #33	ENSCJAG00000077394	ENSCJAG00000083978
Cebidae_a	ANCESTRAL SPECIES	14	ENSGT00940000154810.c	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01050000244941.A.q.a.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.a.b ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000156229.u #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Capuchin	MODERN SPECIES	244												PTPN3 (ENSCCAG00000032931) #16	EPB41L4B (ENSCCAG00000022655) #19	FRRS1L (ENSCCAG00000032250) #20	TMEM245 (ENSCCAG00000018943) #21	CTNNAL1 (ENSCCAG00000035032) #22	ABITRAM (ENSCCAG00000009952) #23	ELP1 (ENSCCAG00000026339) #24	ACTL7A (ENSCCAG00000018348) #25	ENSCCAG00000024109	KLF4 (ENSCCAG00000034894) #30	RAD23B (ENSCCAG00000033669) #31	ZNF462 (ENSCCAG00000015108) #33
Bolivian squirrel monkey	MODERN SPECIES	55	ZNF483 (ENSSBOG00000017749)	ECPAS (ENSSBOG00000027524)	ENSSBOG00000025640 #7	MUSK (ENSSBOG00000020716) #8	SVEP1 (ENSSBOG00000025875) #9	TXNDC8 (ENSSBOG00000034687) #10	ENSSBOG00000032678 ##11	C9orf152 (ENSSBOG00000034426) #13	PALM2AKAP2 (ENSSBOG00000033459)	ENSSBOG00000007442	ENSSBOG00000018988	PTPN3 (ENSSBOG00000036194) #16	ENSSBOG00000029117 #19	FRRS1L (ENSSBOG00000022321) #20	TMEM245 (ENSSBOG00000028290) #21	CTNNAL1 (ENSSBOG00000021875) #22	ABITRAM (ENSSBOG00000024725) #23	ELP1 (ENSSBOG00000022496) #24	ACTL7A (ENSSBOG00000019887) #25	KLF4 (ENSSBOG00000020657) #30	ENSSBOG00000024154 #31	ZNF462 (ENSSBOG00000032170) #33	TMEM38B (ENSSBOG00000026808) #35	FKTN (ENSSBOG00000033576) #37	ENSSBOG00000025346	FSD1L (ENSSBOG00000034007)	ENSSBOG00000024761	SLC44A1 (ENSSBOG00000018945)	ABCA1 (ENSSBOG00000035244)	NIPSNAP3B (ENSSBOG00000031338)	NIPSNAP3A (ENSSBOG00000025285)
Mas night monkey	MODERN SPECIES	604	OR2K2 (ENSANAG00000034187)	ENSANAG00000024135 #7	MUSK (ENSANAG00000021572) #8	SVEP1 (ENSANAG00000031704) #9	TXNDC8 (ENSANAG00000031088) #10	ENSANAG00000022759 ##11	ENSANAG00000030333	C9orf152 (ENSANAG00000029470) #13	PALM2AKAP2 (ENSANAG00000025702)	ENSANAG00000037564	ENSANAG00000034520	PTPN3 (ENSANAG00000037600) #16	EPB41L4B (ENSANAG00000029455) #19	FRRS1L (ENSANAG00000029146) #20	TMEM245 (ENSANAG00000032340) #21	CTNNAL1 (ENSANAG00000032279) #22	ABITRAM (ENSANAG00000038404) #23	ENSANAG00000037326	ELP1 (ENSANAG00000033165) #24	ENSANAG00000020202	KLF4 (ENSANAG00000034670) #30	RAD23B (ENSANAG00000021451) #31	ZNF462 (ENSANAG00000035393) #33	TMEM38B (ENSANAG00000019169) #35	TAL2 (ENSANAG00000005973) #36	FKTN (ENSANAG00000031912) #37	FSD1L (ENSANAG00000026736)	ENSANAG00000020796	SLC44A1 (ENSANAG00000027494)	ENSANAG00000019975	ABCA1 (ENSANAG00000033387)
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.r #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.b.a ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Gibbon	MODERN SPECIES	10	ZNF483 (ENSNLEG00000017483)	ECPAS (ENSNLEG00000017480)	LPAR1 (ENSNLEG00000017476) #7	MUSK (ENSNLEG00000017469) #8	SVEP1 (ENSNLEG00000017463) #9	ENSNLEG00000033326 #10	ENSNLEG00000032849 ##11	C9orf152 (ENSNLEG00000035418) #13	PALM2AKAP2 (ENSNLEG00000017455)	ENSNLEG00000035302 #14	ENSNLEG00000028962	PTPN3 (ENSNLEG00000017436) #16	EPB41L4B (ENSNLEG00000017431) #19	FRRS1L (ENSNLEG00000017427) #20	TMEM245 (ENSNLEG00000017413) #21	CTNNAL1 (ENSNLEG00000030323) #22	ABITRAM (ENSNLEG00000017379) #23	ELP1 (ENSNLEG00000017329) #24	ACTL7A (ENSNLEG00000018973) #25	ACTL7B (ENSNLEG00000018972) #26	ENSNLEG00000027120	ENSNLEG00000017327 #30	ENSNLEG00000017326	RAD23B (ENSNLEG00000017319) #31	ZNF462 (ENSNLEG00000017310) #33	TMEM38B (ENSNLEG00000017305) #35	ENSNLEG00000031329	TAL2 (ENSNLEG00000018969) #36	FKTN (ENSNLEG00000017300) #37	FSD1L (ENSNLEG00000017277)	ENSNLEG00000030492
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.r #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.b.a ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Orangutan	MODERN SPECIES	22	DNAJC25 (ENSPPYG00000019500)	PTGR1 (ENSPPYG00000019499)	ENSPPYG00000019498	ECPAS (ENSPPYG00000019497)	LPAR1 (ENSPPYG00000019495) #7	MUSK (ENSPPYG00000019494) #8	SVEP1 (ENSPPYG00000019493) #9	ENSPPYG00000019492 #10	TXN (ENSPPYG00000019491) ##11	C9orf152 (ENSPPYG00000019490) #13	PALM2AKAP2 (ENSPPYG00000019489)	PTPN3 (ENSPPYG00000019488) #16	EPB41L4B (ENSPPYG00000019487) #19	FRRS1L (ENSPPYG00000019486) #20	TMEM245 (ENSPPYG00000019485) #21	CTNNAL1 (ENSPPYG00000019484) #22	ABITRAM (ENSPPYG00000019483) #23	ELP1 (ENSPPYG00000019482) #24	ACTL7A (ENSPPYG00000019481) #25	ACTL7B (ENSPPYG00000019480) #26	ENSPPYG00000032857	ENSPPYG00000019478 #30	RAD23B (ENSPPYG00000019477) #31	ZNF462 (ENSPPYG00000019476) #33	ENSPPYG00000031352	TMEM38B (ENSPPYG00000019474) #37	FSD1L (ENSPPYG00000019471)	SLC44A1 (ENSPPYG00000019470)	ABCA1 (ENSPPYG00000019469)	NIPSNAP3A (ENSPPYG00000019468)	OR13C9 (ENSPPYG00000034640)
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.r #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.b.a ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000165203.j	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F.s #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT01050000244891.A.j.a.a	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Gorilla	MODERN SPECIES	22	LPAR1 (ENSGGOG00000001749) #7	MUSK (ENSGGOG00000015657) #8	SVEP1 (ENSGGOG00000004135) #9	ENSGGOG00000027079 #10	TXN (ENSGGOG00000006925) ##11	C9orf152 (ENSGGOG00000013066) #13	PALM2-AKAP2 (ENSGGOG00000010137)	ENSGGOG00000026428	ENSGGOG00000040506	ENSGGOG00000040883 #14	ENSGGOG00000023840	PTPN3 (ENSGGOG00000024081) #16	EPB41L4B (ENSGGOG00000004192) #19	FRRS1L (ENSGGOG00000009128) #20	TMEM245 (ENSGGOG00000001950) #21	CTNNAL1 (ENSGGOG00000004228) #22	ABITRAM (ENSGGOG00000004222) #23	ELP1 (ENSGGOG00000004204) #24	ACTL7A (ENSGGOG00000025495) #25	ACTL7B (ENSGGOG00000008278) #26	KLF4 (ENSGGOG00000000096) #30	RAD23B (ENSGGOG00000002511) #31	ENSGGOG00000042705	ZNF462 (ENSGGOG00000008882) #33	ENSGGOG00000028211	ENSGGOG00000042323	ENSGGOG00000043779	TMEM38B (ENSGGOG00000007210) #35	TAL2 (ENSGGOG00000006780) #36	FKTN (ENSGGOG00000005619) #37	FSD1L (ENSGGOG00000026946)
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.r #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.b.a ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000165203.j	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F.s #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT01050000244891.A.j.a.a	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Human	MODERN SPECIES	21	PTGR1 (ENSG00000106853)	ZNF483 (ENSG00000173258)	ECPAS (ENSG00000136813)	OR2K2 (ENSG00000171133)	LPAR1 (ENSG00000198121) #7	MUSK (ENSG00000030304) #8	SVEP1 (ENSG00000165124) #9	TXNDC8 (ENSG00000204193) #10	TXN (ENSG00000136810) ##11	C9orf152 (ENSG00000188959) #13	PALM2AKAP2 (ENSG00000157654)	PTPN3 (ENSG00000070159) #16	EPB41L4B (ENSG00000095203) #19	FRRS1L (ENSG00000260230) #20	TMEM245 (ENSG00000106771) #21	CTNNAL1 (ENSG00000119326) #22	ABITRAM (ENSG00000119328) #23	ELP1 (ENSG00000070061) #24	ACTL7A (ENSG00000187003) #25	ACTL7B (ENSG00000148156) #26	KLF4 (ENSG00000136826) #30	RAD23B (ENSG00000119318) #31	ZNF462 (ENSG00000148143) #33	TMEM38B (ENSG00000095209) #35	TAL2 (ENSG00000186051) #36	FKTN (ENSG00000106692) #37	FSD1L (ENSG00000106701)	SLC44A1 (ENSG00000070214)	ABCA1 (ENSG00000165029)	NIPSNAP3B (ENSG00000165028)	NIPSNAP3A (ENSG00000136783)
Pan	ANCESTRAL SPECIES	18	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.r #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.b.a ##11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000165203.j	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F.s #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000011943.a.a.a.a.b	ENSGT00940000165389	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT01050000244891.A.j.a.a	ENSGT00940000156411 #33	ENSGT00910000147109	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979
Chimpanzee	MODERN SPECIES	22	ZNF483 (ENSPTRG00000021253)	ECPAS (ENSPTRG00000021251)	OR2K2 (ENSPTRG00000021250)	LPAR1 (ENSPTRG00000021249) #7	MUSK (ENSPTRG00000021248) #8	SVEP1 (ENSPTRG00000021246) #9	TXNDC8 (ENSPTRG00000029162) #10	TXN (ENSPTRG00000021245) ##11	C9H9orf152 (ENSPTRG00000040638) #13	PALM2AKAP2 (ENSPTRG00000021242)	PALM2AKAP2 (ENSPTRG00000039394) #14	PTPN3 (ENSPTRG00000021240) #16	EPB41L4B (ENSPTRG00000021239) #19	FRRS1L (ENSPTRG00000021238) #20	TMEM245 (ENSPTRG00000021237) #21	CTNNAL1 (ENSPTRG00000021235) #22	ABITRAM (ENSPTRG00000021234) #23	ELP1 (ENSPTRG00000021233) #24	ACTL7A (ENSPTRG00000021232) #25	ACTL7B (ENSPTRG00000021231) #26	ENSPTRG00000052140	ENSPTRG00000050261	KLF4 (ENSPTRG00000021230) #30	RAD23B (ENSPTRG00000021229) #31	ENSPTRG00000043526	ZNF462 (ENSPTRG00000021228) #33	ENSPTRG00000051779	ENSPTRG00000047867	TMEM38B (ENSPTRG00000021226) #35	TAL2 (ENSPTRG00000021225) #36	FKTN (ENSPTRG00000021224) #37
Bonobo	MODERN SPECIES	22	LPAR1 (ENSPPAG00000039517) #7	ENSPPAG00000040204	MUSK (ENSPPAG00000027272) #8	SVEP1 (ENSPPAG00000030441) #9	ENSPPAG00000043556 #10	TXN (ENSPPAG00000042345) ##11	C9orf152 (ENSPPAG00000037682) #13	ENSPPAG00000028864	ENSPPAG00000041864 #14	ENSPPAG00000027455	PTPN3 (ENSPPAG00000043564) #16	EPB41L4B (ENSPPAG00000028167) #19	ENSPPAG00000043479 #20	TMEM245 (ENSPPAG00000042485) #21	ENSPPAG00000038805 #22	ENSPPAG00000012481 #22	ABITRAM (ENSPPAG00000028675) #23	ELP1 (ENSPPAG00000027510) #24	ACTL7A (ENSPPAG00000007108) #25	ACTL7B (ENSPPAG00000021452) #26	ENSPPAG00000035498	ENSPPAG00000030655	KLF4 (ENSPPAG00000015192) #30	RAD23B (ENSPPAG00000041162) #31	ENSPPAG00000027680	ENSPPAG00000032267	ZNF462 (ENSPPAG00000030092) #33	ENSPPAG00000007053	TMEM38B (ENSPPAG00000033497) #35	TAL2 (ENSPPAG00000004739) #36	FKTN (ENSPPAG00000027627) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT01030000234543.F.t #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT01030000234543.F.t #22
Pan	ANCESTRAL SPECIES																	ENSGT01030000234543.F.t #22
Bonobo	MODERN SPECIES	22	OR2K2 (ENSPPAG00000008245)	LPAR1 (ENSPPAG00000039517) #7	ENSPPAG00000040204	MUSK (ENSPPAG00000027272) #8	SVEP1 (ENSPPAG00000030441) #9	ENSPPAG00000043556 #10	TXN (ENSPPAG00000042345) ##11	C9orf152 (ENSPPAG00000037682) #13	ENSPPAG00000028864	ENSPPAG00000041864 #14	ENSPPAG00000027455	PTPN3 (ENSPPAG00000043564) #16	EPB41L4B (ENSPPAG00000028167) #19	ENSPPAG00000043479 #20	TMEM245 (ENSPPAG00000042485) #21	ENSPPAG00000038805 #22	ENSPPAG00000012481 #22	ABITRAM (ENSPPAG00000028675) #23	ELP1 (ENSPPAG00000027510) #24	ACTL7A (ENSPPAG00000007108) #25	ACTL7B (ENSPPAG00000021452) #26	ENSPPAG00000035498	ENSPPAG00000030655	KLF4 (ENSPPAG00000015192) #30	RAD23B (ENSPPAG00000041162) #31	ENSPPAG00000027680	ENSPPAG00000032267	ZNF462 (ENSPPAG00000030092) #33	ENSPPAG00000007053	TMEM38B (ENSPPAG00000033497) #35	TAL2 (ENSPPAG00000004739) #36
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00950000182976.b.a.k	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Rhinopithecus	ANCESTRAL SPECIES	166		ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.a #11	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00950000182976.b.a.k	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Golden snub-nosed monkey	MODERN SPECIES	1230				ENSRROG00000033771 #7	MUSK (ENSRROG00000011014) #8	SVEP1 (ENSRROG00000042701) #9	TXNDC8 (ENSRROG00000034846) #10	ENSRROG00000036869 #11	C9orf152 (ENSRROG00000039930) #13	PALM2AKAP2 (ENSRROG00000010883)	ENSRROG00000030168	PTPN3 (ENSRROG00000030615) #16	EPB41L4B (ENSRROG00000032993) #19	FRRS1L (ENSRROG00000022515) #20	TMEM245 (ENSRROG00000043467) #21	CTNNAL1 (ENSRROG00000035611) #22	ABITRAM (ENSRROG00000043008) #23	ELP1 (ENSRROG00000043925) #24	ACTL7A (ENSRROG00000025001) #25	ACTL7B (ENSRROG00000008823) #26
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	550																ENSRBIG00000034292 #22	ENSRBIG00000032896 #23	ELP1 (ENSRBIG00000035292) #24	ACTL7A (ENSRBIG00000037801) #25	ACTL7B (ENSRBIG00000029030) #26	KLF4 (ENSRBIG00000017443) #30	RAD23B (ENSRBIG00000044657) #31	ZNF462 (ENSRBIG00000044832) #33	TMEM38B (ENSRBIG00000040378) #35	ENSRBIG00000044041	FKTN (ENSRBIG00000035993) #37	FSD1L (ENSRBIG00000031184)	ENSRBIG00000015716	SLC44A1 (ENSRBIG00000036928)	ABCA1 (ENSRBIG00000035569)	NIPSNAP3A (ENSRBIG00000024780)
Black snub-nosed monkey	MODERN SPECIES	2500												PTPN3 (ENSRBIG00000040891) #16	EPB41L4B (ENSRBIG00000043023) #19	FRRS1L (ENSRBIG00000039628) #20	TMEM245 (ENSRBIG00000043079) #21	ENSRBIG00000039025 #22
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00950000182976.b.a.k	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Vervet Monkey	MODERN SPECIES	3	PTGR1 (ENSCSAG00000012179)	ZNF483 (ENSCSAG00000012168)	ECPAS (ENSCSAG00000012157)	OR2K2 (ENSCSAG00000000469)	LPAR1 (ENSCSAG00000012120) #7	ENSCSAG00000012109 #8	SVEP1 (ENSCSAG00000012026) #9	TXNDC8 (ENSCSAG00000011773) #10	ENSCSAG00000011770 #11	C9orf152 (ENSCSAG00000011765) #13	PALM2AKAP2 (ENSCSAG00000011760)	PTPN3 (ENSCSAG00000011753) #16	EPB41L4B (ENSCSAG00000011705) #19	FRRS1L (ENSCSAG00000011596) #20	TMEM245 (ENSCSAG00000011549) #21	CTNNAL1 (ENSCSAG00000011467) #22	ABITRAM (ENSCSAG00000011453) #23	ELP1 (ENSCSAG00000011447) #24	ACTL7A (ENSCSAG00000000468) #25	ACTL7B (ENSCSAG00000000467) #26	KLF4 (ENSCSAG00000011429) #30	RAD23B (ENSCSAG00000011420) #31	ZNF462 (ENSCSAG00000011406) #33	TMEM38B (ENSCSAG00000011397) #35	TAL2 (ENSCSAG00000000466) #36	FKTN (ENSCSAG00000011375) #37	FSD1L (ENSCSAG00000011329)	SLC44A1 (ENSCSAG00000011315)	ABCA1 (ENSCSAG00000011297)	NIPSNAP3A (ENSCSAG00000011278)	ENSCSAG00000000465
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00950000182976.b.a.k	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471.i #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT00900000143523	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00950000182976.b.a.k	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471.i #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	567	ECPAS (ENSMNEG00000031283)	ENSMNEG00000044219 #7	MUSK (ENSMNEG00000045122) #8	SVEP1 (ENSMNEG00000030325) #9	TXNDC8 (ENSMNEG00000037908) #10	TXN (ENSMNEG00000044490) #11	C9orf152 (ENSMNEG00000036846) #13	PALM2AKAP2 (ENSMNEG00000034564)	ENSMNEG00000040101 #14	PTPN3 (ENSMNEG00000031178) #16	EPB41L4B (ENSMNEG00000039820) #19	FRRS1L (ENSMNEG00000036099) #20	TMEM245 (ENSMNEG00000044768) #21	ENSMNEG00000026789	ENSMNEG00000038591 #22	ENSMNEG00000042916 #22	ABITRAM (ENSMNEG00000005107) #23	ELP1 (ENSMNEG00000032258) #24	ACTL7A (ENSMNEG00000038152) #25	ACTL7B (ENSMNEG00000012729) #26	KLF4 (ENSMNEG00000032059) #30	RAD23B (ENSMNEG00000039434) #31	ZNF462 (ENSMNEG00000028404) #33	ENSMNEG00000032988	TMEM38B (ENSMNEG00000031505) #35	TAL2 (ENSMNEG00000028151) #36	ENSMNEG00000008885	FKTN (ENSMNEG00000033164) #37	FSD1L (ENSMNEG00000042664)	ENSMNEG00000028344	SLC44A1 (ENSMNEG00000043781)
Pig-tailed macaque	MODERN SPECIES	567	ZNF483 (ENSMNEG00000036887)	ECPAS (ENSMNEG00000031283)	ENSMNEG00000044219 #7	MUSK (ENSMNEG00000045122) #8	SVEP1 (ENSMNEG00000030325) #9	TXNDC8 (ENSMNEG00000037908) #10	TXN (ENSMNEG00000044490) #11	C9orf152 (ENSMNEG00000036846) #13	PALM2AKAP2 (ENSMNEG00000034564)	ENSMNEG00000040101 #14	PTPN3 (ENSMNEG00000031178) #16	EPB41L4B (ENSMNEG00000039820) #19	FRRS1L (ENSMNEG00000036099) #20	TMEM245 (ENSMNEG00000044768) #21	ENSMNEG00000026789	ENSMNEG00000038591 #22	ENSMNEG00000042916 #22	ABITRAM (ENSMNEG00000005107) #23	ELP1 (ENSMNEG00000032258) #24	ACTL7A (ENSMNEG00000038152) #25	ACTL7B (ENSMNEG00000012729) #26	KLF4 (ENSMNEG00000032059) #30	RAD23B (ENSMNEG00000039434) #31	ZNF462 (ENSMNEG00000028404) #33	ENSMNEG00000032988	TMEM38B (ENSMNEG00000031505) #35	TAL2 (ENSMNEG00000028151) #36	ENSMNEG00000008885	FKTN (ENSMNEG00000033164) #37	FSD1L (ENSMNEG00000042664)	ENSMNEG00000028344
Macaca_a	ANCESTRAL SPECIES	10	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.a.b	ENSGT00930000151059	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT00900000143523	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00390000014471.i #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000167556.b.b.a.b.a.a.a.b.a.b.a.a.b.b	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Crab-eating macaque	MODERN SPECIES	6	ENSMFAG00000034461 #7	MUSK (ENSMFAG00000030822) #8	SVEP1 (ENSMFAG00000043533) #9	ENSMFAG00000047934	TXNDC8 (ENSMFAG00000031905) #10	ENSMFAG00000049080 #11	C9orf152 (ENSMFAG00000048389) #13	ENSMFAG00000059732	PALM2AKAP2 (ENSMFAG00000004557)	ENSMFAG00000039297	PTPN3 (ENSMFAG00000035170) #16	EPB41L4B (ENSMFAG00000039720) #19	FRRS1L (ENSMFAG00000013386) #20	TMEM245 (ENSMFAG00000026452) #21	ENSMFAG00000050759	CTNNAL1 (ENSMFAG00000017883) #22	ABITRAM (ENSMFAG00000036713) #23	ELP1 (ENSMFAG00000043210) #24	ACTL7A (ENSMFAG00000006946) #25	ACTL7B (ENSMFAG00000006984) #26	KLF4 (ENSMFAG00000035870) #30	RAD23B (ENSMFAG00000031929) #31	ZNF462 (ENSMFAG00000037841) #33	FKTN (ENSMFAG00000035942) #37	FSD1L (ENSMFAG00000000831)	ENSMFAG00000016897	SLC44A1 (ENSMFAG00000044299)	ENSMFAG00000053554	ABCA1 (ENSMFAG00000002145)	NIPSNAP3B (ENSMFAG00000033171)	OR13C9 (ENSMFAG00000061784)
Rhesus	DUPLICATION
Rhesus	MODERN SPECIES	6	ECPAS (ENSMMUG00000016315)	OR2K2 (ENSMMUG00000064363)	LPAR1 (ENSMMUG00000006906) #7	MUSK (ENSMMUG00000007065) #8	SVEP1 (ENSMMUG00000047960) #9	ENSMMUG00000060086	ENSMMUG00000061204	TXNDC8 (ENSMMUG00000010325) #10	C15H9orf152 (ENSMMUG00000052156) #13	ENSMMUG00000058252	PALM2AKAP2 (ENSMMUG00000002361)	PTPN3 (ENSMMUG00000001250) #16	EPB41L4B (ENSMMUG00000017515) #19	FRRS1L (ENSMMUG00000017514) #20	TMEM245 (ENSMMUG00000000695) #21	CTNNAL1 (ENSMMUG00000000690) #22	ABITRAM (ENSMMUG00000053648) #23	ENSMMUG00000064066	ELP1 (ENSMMUG00000019357) #24	ACTL7A (ENSMMUG00000019355) #25	ACTL7B (ENSMMUG00000019354) #26	KLF4 (ENSMMUG00000006088) #30	RAD23B (ENSMMUG00000014944) #31	ENSMMUG00000053926	ZNF462 (ENSMMUG00000017151) #33	TMEM38B (ENSMMUG00000002672) #35	FKTN (ENSMMUG00000002669) #37	FSD1L (ENSMMUG00000002665)	SLC44A1 (ENSMMUG00000015024)	ENSMMUG00000058597	ABCA1 (ENSMMUG00000020608)
Rhesus	MODERN SPECIES	4	IL1F10 (ENSMMUG00000061530)	IL36RN (ENSMMUG00000061691)	IL36B (ENSMMUG00000064457)	IL36A (ENSMMUG00000000988)	IL36G (ENSMMUG00000062948)	IL37 (ENSMMUG00000005922)	IL1B (ENSMMUG00000061716)	IL1A (ENSMMUG00000052787)	CKAP2L (ENSMMUG00000019773)	NT5DC4 (ENSMMUG00000019770)	ENSMMUG00000050951	SLC20A1 (ENSMMUG00000004574)	CHCHD5 (ENSMMUG00000007779)	ENSMMUG00000062885	POLR1B (ENSMMUG00000009468)	ENSMMUG00000053295 #22	ENSMMUG00000056411	ZC3H6 (ENSMMUG00000016430)	ZC3H8 (ENSMMUG00000044163)	TMEM87B (ENSMMUG00000002231)	MERTK (ENSMMUG00000010066)	ANAPC1 (ENSMMUG00000012115)	ENSMMUG00000059896	BCL2L11 (ENSMMUG00000018423)	BUB1 (ENSMMUG00000017653)	NPHP1 (ENSMMUG00000022802)	ENSMMUG00000062819	MALL (ENSMMUG00000054575)	ENSMMUG00000056142	ENSMMUG00000049312	SOWAHC (ENSMMUG00000017179)
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00950000182976.b.a.k	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471.i #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Olive baboon	MODERN SPECIES	4	OR2K2 (ENSPANG00000001755)	ENSPANG00000037739 #7	MUSK (ENSPANG00000025746) #8	SVEP1 (ENSPANG00000025748) #9	TXNDC8 (ENSPANG00000025740) #10	ENSPANG00000031185 #11	C9orf152 (ENSPANG00000025739) #13	ENSPANG00000035251	PALM2AKAP2 (ENSPANG00000025738)	ENSPANG00000048512	ENSPANG00000048220	PTPN3 (ENSPANG00000025736) #16	EPB41L4B (ENSPANG00000025737) #19	FRRS1L (ENSPANG00000025735) #20	TMEM245 (ENSPANG00000025734) #21	CTNNAL1 (ENSPANG00000025732) #22	ABITRAM (ENSPANG00000025733) #23	ELP1 (ENSPANG00000025731) #24	ACTL7A (ENSPANG00000014060) #25	ACTL7B (ENSPANG00000019789) #26	KLF4 (ENSPANG00000040002) #30	RAD23B (ENSPANG00000025719) #31	ENSPANG00000044746	ZNF462 (ENSPANG00000048349) #33	ENSPANG00000041197	TMEM38B (ENSPANG00000025723) #35	TAL2 (ENSPANG00000017357) #36	ENSPANG00000037071	ENSPANG00000025724 #37	FSD1L (ENSPANG00000025726)	SLC44A1 (ENSPANG00000025727)
Cercopithecinae_d	ANCESTRAL SPECIES	130	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.q.b #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.c.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000153341.b.p.a.b.b.b.b.g.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.c #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b.c #31	ENSGT00940000156411 #33	ENSGT00950000182976.b.a.k	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471.i #37	ENSGT00940000157979	ENSGT00910000146916	ENSGT00940000157174	ENSGT00940000154658.b
Sooty mangabey	MODERN SPECIES	231	ECPAS (ENSCATG00000036466)	OR2K2 (ENSCATG00000015378)	LPAR1 (ENSCATG00000000222) #7	MUSK (ENSCATG00000034968) #8	SVEP1 (ENSCATG00000033969) #9	TXNDC8 (ENSCATG00000033558) #10	ENSCATG00000034102 #11	C9orf152 (ENSCATG00000031973) #13	PALM2AKAP2 (ENSCATG00000027194)	ENSCATG00000034078 #14	ENSCATG00000038233	PTPN3 (ENSCATG00000042446) #16	EPB41L4B (ENSCATG00000037317) #19	FRRS1L (ENSCATG00000026013) #20	TMEM245 (ENSCATG00000036531) #21	CTNNAL1 (ENSCATG00000039004) #22	ABITRAM (ENSCATG00000030229) #23	ELP1 (ENSCATG00000042841) #24	ACTL7A (ENSCATG00000021871) #25	ACTL7B (ENSCATG00000022602) #26	KLF4 (ENSCATG00000019152) #30	RAD23B (ENSCATG00000036672) #31	ENSCATG00000035053
Drill	MODERN SPECIES	1495	ENSMLEG00000023734	ENSMLEG00000011401	LPAR1 (ENSMLEG00000043562) #7	MUSK (ENSMLEG00000036730) #8	SVEP1 (ENSMLEG00000042709) #9	TXNDC8 (ENSMLEG00000030006) #10	ENSMLEG00000029435 #11	C9orf152 (ENSMLEG00000027043) #13	PALM2AKAP2 (ENSMLEG00000037527)	ENSMLEG00000042703 #14	ENSMLEG00000037721	PTPN3 (ENSMLEG00000039144) #16	EPB41L4B (ENSMLEG00000034040) #19	FRRS1L (ENSMLEG00000033941) #20	TMEM245 (ENSMLEG00000029371) #21	CTNNAL1 (ENSMLEG00000040696) #22	ABITRAM (ENSMLEG00000027263) #23	ELP1 (ENSMLEG00000033480) #24	ACTL7A (ENSMLEG00000027088) #25	ACTL7B (ENSMLEG00000008294) #26	ENSMLEG00000030413 #30	ENSMLEG00000037555	RAD23B (ENSMLEG00000029024) #31	ZNF462 (ENSMLEG00000028635) #33	ENSMLEG00000021022	TMEM38B (ENSMLEG00000033819) #35	TAL2 (ENSMLEG00000027516) #36	ENSMLEG00000038552 #37	FSD1L (ENSMLEG00000031441)	ENSMLEG00000011494	SLC44A1 (ENSMLEG00000035531)
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.a ##11	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158.l #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e.c #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Bushbaby	MODERN SPECIES	129	ZNF483 (ENSOGAG00000011399)	ECPAS (ENSOGAG00000011393)	OR2K2 (ENSOGAG00000025252)	ENSOGAG00000015335 #7	MUSK (ENSOGAG00000012704) #8	SVEP1 (ENSOGAG00000011809) #9	ENSOGAG00000009165 ##11	C9orf152 (ENSOGAG00000009164) #13	PALM2AKAP2 (ENSOGAG00000009157)	ENSOGAG00000025160 #14	ENSOGAG00000034039	PTPN3 (ENSOGAG00000016018) #16	EPB41L4B (ENSOGAG00000005508) #19	FRRS1L (ENSOGAG00000026708) #20	TMEM245 (ENSOGAG00000009075) #21	CTNNAL1 (ENSOGAG00000009072) #22	ABITRAM (ENSOGAG00000024317) #23	ELP1 (ENSOGAG00000009065) #24	ACTL7A (ENSOGAG00000009064) #25	ACTL7B (ENSOGAG00000009063) #26	ENSOGAG00000024789	KLF4 (ENSOGAG00000029918) #30	ENSOGAG00000025236	ENSOGAG00000024651	RAD23B (ENSOGAG00000014216) #31	ZNF462 (ENSOGAG00000001625) #33	TMEM38B (ENSOGAG00000033320) #35	TAL2 (ENSOGAG00000009225) #36	FKTN (ENSOGAG00000024071) #37	FSD1L (ENSOGAG00000029141)	SLC44A1 (ENSOGAG00000005531)
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.a ##11	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158.l #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e.c #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Mouse lemur	MODERN SPECIES	1	ENSMICG00000043426	ECPAS (ENSMICG00000000003)	ENSMICG00000044771	LPAR1 (ENSMICG00000004352) #7	MUSK (ENSMICG00000004347) #8	SVEP1 (ENSMICG00000002133) #9	TXNDC8 (ENSMICG00000002131) #10	ENSMICG00000002128 ##11	C9orf152 (ENSMICG00000042061) #13	PALM2AKAP2 (ENSMICG00000002119)	ENSMICG00000046433 #14	PTPN3 (ENSMICG00000002104) #16	EPB41L4B (ENSMICG00000002096) #19	FRRS1L (ENSMICG00000002090) #20	TMEM245 (ENSMICG00000002081) #21	CTNNAL1 (ENSMICG00000002075) #22	ABITRAM (ENSMICG00000042265) #23	ELP1 (ENSMICG00000002058) #24	ENSMICG00000004603 #30	ENSMICG00000044787	ENSMICG00000027027 #31	ZNF462 (ENSMICG00000008466) #33	ENSMICG00000044480	TMEM38B (ENSMICG00000001721) #35	TAL2 (ENSMICG00000045486) #36	FKTN (ENSMICG00000001709) #37	FSD1L (ENSMICG00000001704)	SLC44A1 (ENSMICG00000012375)	ABCA1 (ENSMICG00000006176)	NIPSNAP3B (ENSMICG00000035219)	NIPSNAP3A (ENSMICG00000001137)
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.k.a ##11	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158.l #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e.c #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Coquerels sifaka	MODERN SPECIES	140											ENSPCOG00000015469 #14	PTPN3 (ENSPCOG00000028551) #16	EPB41L4B (ENSPCOG00000022633) #19	FRRS1L (ENSPCOG00000023777) #20	TMEM245 (ENSPCOG00000027730) #21	CTNNAL1 (ENSPCOG00000005922) #22	ABITRAM (ENSPCOG00000021341) #23	ELP1 (ENSPCOG00000002298) #24	KLF4 (ENSPCOG00000015757) #30	RAD23B (ENSPCOG00000006374) #31	ZNF462 (ENSPCOG00000019171) #33	TMEM38B (ENSPCOG00000009192) #35	TAL2 (ENSPCOG00000012949) #36	FKTN (ENSPCOG00000015568) #37	FSD1L (ENSPCOG00000022453)	ENSPCOG00000024558	ABCA1 (ENSPCOG00000014966)	NIPSNAP3B (ENSPCOG00000017296)	NIPSNAP3A (ENSPCOG00000014530)	OR13D1 (ENSPCOG00000026887)	SMC2 (ENSPCOG00000015265)
Greater bamboo lemur	MODERN SPECIES	428						SVEP1 (ENSPSMG00000019290) #9	ENSPSMG00000019254 #10	ENSPSMG00000019237 ##11	C9orf152 (ENSPSMG00000019233) #13	PALM2AKAP2 (ENSPSMG00000019166)	ENSPSMG00000019111	PTPN3 (ENSPSMG00000018813) #16	EPB41L4B (ENSPSMG00000018633) #19	FRRS1L (ENSPSMG00000018605) #20	TMEM245 (ENSPSMG00000018590) #21	ENSPSMG00000018552 #22
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Eulipotyphla	ANCESTRAL SPECIES	920																ENSGT01030000234543.F #22	ENSGT00450000040303 #23
Common shrew	MODERN SPECIES	1430																ENSSARG00000009339 #22	ABITRAM (ENSSARG00000009305) #23
Hedgehog	MODERN SPECIES	2018																CTNNAL1 (ENSEEUG00000013839) #22	ENSEEUG00000013826 #23
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.r #11	ENSGT00940000167503	ENSGT00940000154259.l.q.a.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.r #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT01040000240406.A.b.a.b
Equus	ANCESTRAL SPECIES	35	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT01000000215858	ENSGT00940000156229 #30	ENSGT00390000012078.b.w #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Donkey	MODERN SPECIES	1	ZNF483 (ENSEASG00005000872)	ECPAS (ENSEASG00005000801)	OR2K2 (ENSEASG00005035842)	LPAR1 (ENSEASG00005023117) #7	MUSK (ENSEASG00005023111) #8	SVEP1 (ENSEASG00005023088) #9	ENSEASG00005028570 #10	TXN (ENSEASG00005035917) #11	C9orf152 (ENSEASG00005037912) #13	PALM2AKAP2 (ENSEASG00005023068)	ENSEASG00005037908 #14	PTPN3 (ENSEASG00005023061) #16	EPB41L4B (ENSEASG00005023050) #19	FRRS1L (ENSEASG00005027525) #20	TMEM245 (ENSEASG00005023041) #21	CTNNAL1 (ENSEASG00005023040) #22	ABITRAM (ENSEASG00005030056) #23	ELP1 (ENSEASG00005023037) #24	ACTL7A (ENSEASG00005023036) #25	ACTL7B (ENSEASG00005023035) #26	ENSEASG00005030541	ENSEASG00005023032	KLF4 (ENSEASG00005023031) #30	ENSEASG00005023029	ENSEASG00005023028 #31	ZNF462 (ENSEASG00005023027) #33	TMEM38B (ENSEASG00005023026) #35	TAL2 (ENSEASG00005031592) #36	FKTN (ENSEASG00005023023) #37	FSD1L (ENSEASG00005023022)	SLC44A1 (ENSEASG00005023020)
Horse	MODERN SPECIES	17	ZNF483 (ENSECAG00000000117)	ECPAS (ENSECAG00000020519)	ENSECAG00000055274	OR2K2 (ENSECAG00000045798)	LPAR1 (ENSECAG00000016606) #7	MUSK (ENSECAG00000010228) #8	SVEP1 (ENSECAG00000021653) #9	TXNDC8 (ENSECAG00000021607) #10	TXN (ENSECAG00000013324) #11	C25H9orf152 (ENSECAG00000013290) #13	PALM2AKAP2 (ENSECAG00000010552)	PTPN3 (ENSECAG00000007806) #16	EPB41L4B (ENSECAG00000018914) #19	FRRS1L (ENSECAG00000017718) #20	TMEM245 (ENSECAG00000008150) #21	CTNNAL1 (ENSECAG00000018131) #22	ABITRAM (ENSECAG00000014764) #23	ELP1 (ENSECAG00000014279) #24	ACTL7A (ENSECAG00000005092) #25	ACTL7B (ENSECAG00000005070) #26	ENSECAG00000030375 #31	KLF4 (ENSECAG00000010613) #30	ENSECAG00000029987	RAD23B (ENSECAG00000021928) #31	ZNF462 (ENSECAG00000015655) #33	TMEM38B (ENSECAG00000013488) #35	ENSECAG00000046843 #36	FKTN (ENSECAG00000008158) #37	FSD1L (ENSECAG00000012984)	ENSECAG00000032969	SLC44A1 (ENSECAG00000002233)
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.r #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.r #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b
Greater horseshoe bat	MODERN SPECIES	3	ECPAS (ENSRFEG00010019217)	OR2K2 (ENSRFEG00010019161)	LPAR1 (ENSRFEG00010019123) #7	MUSK (ENSRFEG00010019006) #8	ENSRFEG00010018970 #9	ENSRFEG00010018951 #9	ENSRFEG00010018766 #10	ENSRFEG00010018690 #11	C9orf152 (ENSRFEG00010018639) #13	PALM2AKAP2 (ENSRFEG00010018553)	ENSRFEG00010018409 #14	PTPN3 (ENSRFEG00010018189) #16	EPB41L4B (ENSRFEG00010018038) #19	FRRS1L (ENSRFEG00010017957) #20	TMEM245 (ENSRFEG00010017866) #21	CTNNAL1 (ENSRFEG00010017765) #22	ABITRAM (ENSRFEG00010017721) #23	ELP1 (ENSRFEG00010017609) #24	ACTL7A (ENSRFEG00010017577) #25	ACTL7B (ENSRFEG00010017556) #26	KLF4 (ENSRFEG00010017439) #30	ENSRFEG00010017423	RAD23B (ENSRFEG00010017264) #31	ZNF462 (ENSRFEG00010017189) #33	ENSRFEG00010017124	TMEM38B (ENSRFEG00010017023) #35	TAL2 (ENSRFEG00010017010) #36	FKTN (ENSRFEG00010016923) #37	FSD1L (ENSRFEG00010016824)	ENSRFEG00010016774	SLC44A1 (ENSRFEG00010016269)
Microbat	MODERN SPECIES	980	ENSMLUG00000009534	ECPAS (ENSMLUG00000003939)	ENSMLUG00000024331	LPAR1 (ENSMLUG00000003936) #7	MUSK (ENSMLUG00000003928) #8	SVEP1 (ENSMLUG00000014118) #9	ENSMLUG00000000351	ENSMLUG00000014115 #10	TXN (ENSMLUG00000009065) #11	PALM2AKAP2 (ENSMLUG00000011035)	ENSMLUG00000026921 #14	PTPN3 (ENSMLUG00000002200) #16	EPB41L4B (ENSMLUG00000002183) #19	FRRS1L (ENSMLUG00000002180) #20	ENSMLUG00000002168	CTNNAL1 (ENSMLUG00000012830) #22	ABITRAM (ENSMLUG00000012826) #23	ELP1 (ENSMLUG00000012798) #24	ACTL7A (ENSMLUG00000009740) #25	ACTL7B (ENSMLUG00000009727) #26	KLF4 (ENSMLUG00000014795) #30	RAD23B (ENSMLUG00000017622) #31	ENSMLUG00000005692	ZNF462 (ENSMLUG00000011306) #33	TMEM38B (ENSMLUG00000002636) #35	TAL2 (ENSMLUG00000008792) #36	FKTN (ENSMLUG00000005101) #37	FSD1L (ENSMLUG00000005089)	ENSMLUG00000023995	SLC44A1 (ENSMLUG00000015406)	ABCA1 (ENSMLUG00000010157)
Megabat	MODERN SPECIES	1259														FRRS1L (ENSPVAG00000012709) #20	TMEM245 (ENSPVAG00000012706) #21	CTNNAL1 (ENSPVAG00000012704) #22	ABITRAM (ENSPVAG00000012703) #23	ELP1 (ENSPVAG00000012701) #24	ACTL7A (ENSPVAG00000012700) #25	ACTL7B (ENSPVAG00000012699) #26
Carnivora	ANCESTRAL SPECIES	18	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Panthera	ANCESTRAL SPECIES	11	ENSGT00940000154810	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00940000154810	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
lion	MODERN SPECIES	13	DNAJC25 (ENSPLOG00000017763)	PTGR1 (ENSPLOG00000017807)	ZNF483 (ENSPLOG00000017952)	ECPAS (ENSPLOG00000018044)	LPAR1 (ENSPLOG00000018490) #7	MUSK (ENSPLOG00000018602) #8	SVEP1 (ENSPLOG00000019066) #9	ENSPLOG00000019699 #10	TXN (ENSPLOG00000019862) #11	C9orf152 (ENSPLOG00000019892) #13	PALM2AKAP2 (ENSPLOG00000019986)	PTPN3 (ENSPLOG00000020287) #16	EPB41L4B (ENSPLOG00000020567) #19	FRRS1L (ENSPLOG00000020657) #20	TMEM245 (ENSPLOG00000020715) #21	CTNNAL1 (ENSPLOG00000020834) #22	ABITRAM (ENSPLOG00000020919) #23	ELP1 (ENSPLOG00000020965) #24	ACTL7A (ENSPLOG00000021000) #25	ACTL7B (ENSPLOG00000021012) #26	KLF4 (ENSPLOG00000021040) #30	RAD23B (ENSPLOG00000021089) #31	ZNF462 (ENSPLOG00000021126) #33	TMEM38B (ENSPLOG00000021197) #35	TAL2 (ENSPLOG00000021214) #36	FKTN (ENSPLOG00000021228) #37	FSD1L (ENSPLOG00000021278)	SLC44A1 (ENSPLOG00000021435)	ABCA1 (ENSPLOG00000021578)	NIPSNAP3B (ENSPLOG00000021689)	NIPSNAP3A (ENSPLOG00000021710)
leopard	MODERN SPECIES	26	ZNF483 (ENSPPRG00000014067)	ECPAS (ENSPPRG00000013029)	LPAR1 (ENSPPRG00000009496) #7	MUSK (ENSPPRG00000007145) #8	ENSPPRG00000003536	SVEP1 (ENSPPRG00000001793) #9	ENSPPRG00000023198 #10	ENSPPRG00000023724 #11	C9orf152 (ENSPPRG00000021823) #13	PALM2AKAP2 (ENSPPRG00000021516)	ENSPPRG00000020430 #14	PTPN3 (ENSPPRG00000015022) #16	EPB41L4B (ENSPPRG00000011114) #19	FRRS1L (ENSPPRG00000009720) #20	TMEM245 (ENSPPRG00000009302) #21	CTNNAL1 (ENSPPRG00000007177) #22	ABITRAM (ENSPPRG00000004835) #23	ELP1 (ENSPPRG00000004707) #24	ACTL7A (ENSPPRG00000022234) #25	ACTL7B (ENSPPRG00000022222) #26	ENSPPRG00000003412	KLF4 (ENSPPRG00000000867) #30	ENSPPRG00000000456	RAD23B (ENSPPRG00000022932) #31	ZNF462 (ENSPPRG00000023097) #33	TMEM38B (ENSPPRG00000024133) #35	TAL2 (ENSPPRG00000021701) #36	FKTN (ENSPPRG00000024360) #37	FSD1L (ENSPPRG00000024933)	SLC44A1 (ENSPPRG00000014775)	ENSPPRG00000014150
Tiger	MODERN SPECIES	473	ZNF483 (ENSPTIG00000018842)	ECPAS (ENSPTIG00000014375)	ENSPTIG00000013329	LPAR1 (ENSPTIG00000012409) #7	MUSK (ENSPTIG00000006834) #8	SVEP1 (ENSPTIG00000015429) #9	ENSPTIG00000013084 #10	ENSPTIG00000011944 #11	C9orf152 (ENSPTIG00000011512) #13	PALM2AKAP2 (ENSPTIG00000010889)	ENSPTIG00000009316 #14	PTPN3 (ENSPTIG00000017837) #16	EPB41L4B (ENSPTIG00000015768) #19	FRRS1L (ENSPTIG00000014536) #20	TMEM245 (ENSPTIG00000012888) #21	CTNNAL1 (ENSPTIG00000007130) #22	ABITRAM (ENSPTIG00000006473) #23	ELP1 (ENSPTIG00000004053) #24	ACTL7A (ENSPTIG00000002288) #25	ACTL7B (ENSPTIG00000002259) #26	ENSPTIG00000001035 #30	RAD23B (ENSPTIG00000022094) #31	ZNF462 (ENSPTIG00000022002) #33	TMEM38B (ENSPTIG00000021938) #35	TAL2 (ENSPTIG00000002089) #36	FKTN (ENSPTIG00000020059) #37	FSD1L (ENSPTIG00000008803)	SLC44A1 (ENSPTIG00000002919)	ABCA1 (ENSPTIG00000020275)	NIPSNAP3B (ENSPTIG00000018697)	NIPSNAP3A (ENSPTIG00000018439)
Cat	MODERN SPECIES	244	PTGR1 (ENSFCAG00000004339)	ZNF483 (ENSFCAG00000027153)	ECPAS (ENSFCAG00000006896)	OR2K2 (ENSFCAG00000026422)	LPAR1 (ENSFCAG00000028510) #7	MUSK (ENSFCAG00000004385) #8	SVEP1 (ENSFCAG00000004796) #9	TXNDC8 (ENSFCAG00000033736) #10	ENSFCAG00000046764 #11	CD4H9orf152 (ENSFCAG00000032145) #13	PALM2AKAP2 (ENSFCAG00000027493)	PTPN3 (ENSFCAG00000010948) #16	EPB41L4B (ENSFCAG00000010945) #19	FRRS1L (ENSFCAG00000031907) #20	TMEM245 (ENSFCAG00000010943) #21	CTNNAL1 (ENSFCAG00000026654) #22	ABITRAM (ENSFCAG00000034834) #23	ELP1 (ENSFCAG00000010939) #24	ACTL7A (ENSFCAG00000010938) #25	ACTL7B (ENSFCAG00000025879) #26	KLF4 (ENSFCAG00000028016) #30	RAD23B (ENSFCAG00000025586) #31	ZNF462 (ENSFCAG00000004231) #33	TMEM38B (ENSFCAG00000023318) #35	FKTN (ENSFCAG00000008048) #37	FSD1L (ENSFCAG00000012153)	SLC44A1 (ENSFCAG00000013294)	ENSFCAG00000053176	ABCA1 (ENSFCAG00000004355)	NIPSNAP3A (ENSFCAG00000024653)	ENSFCAG00000022837
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.b.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Canidae	ANCESTRAL SPECIES	9	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.r #11	ENSGT00940000154259.l.q.a.b.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Canis_lupus	ANCESTRAL SPECIES	15	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.r #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Dingo	MODERN SPECIES	366	ZNF483 (ENSCAFG00020022557)	ECPAS (ENSCAFG00020022513)	OR2K2 (ENSCAFG00020022490)	LPAR1 (ENSCAFG00020022485) #7	MUSK (ENSCAFG00020022466) #8	SVEP1 (ENSCAFG00020022436) #9	ENSCAFG00020022429 #10	ENSCAFG00020022428 #11	C9orf152 (ENSCAFG00020022427) #13	PALM2AKAP2 (ENSCAFG00020022425)	ENSCAFG00020022422 #14	PTPN3 (ENSCAFG00020021948) #16	EPB41L4B (ENSCAFG00020021911) #19	FRRS1L (ENSCAFG00020021910) #20	TMEM245 (ENSCAFG00020021841) #21	CTNNAL1 (ENSCAFG00020021832) #22	ABITRAM (ENSCAFG00020021824) #23	ELP1 (ENSCAFG00020020402) #24	ACTL7A (ENSCAFG00020020374) #25	ACTL7B (ENSCAFG00020020372) #26	KLF4 (ENSCAFG00020020355) #30	RAD23B (ENSCAFG00020020346) #31	ZNF462 (ENSCAFG00020020343) #33	ENSCAFG00020020331 #35	TAL2 (ENSCAFG00020020328) #36	FKTN (ENSCAFG00020020221) #37	FSD1L (ENSCAFG00020020189)	SLC44A1 (ENSCAFG00020020087)	ABCA1 (ENSCAFG00020020013)	NIPSNAP3B (ENSCAFG00020020011)	NIPSNAP3A (ENSCAFG00020020010)
Dog	MODERN SPECIES	2	PTGR1 (ENSCAFG00845005537)	ZNF483 (ENSCAFG00845005442)	ECPAS (ENSCAFG00845005376)	LPAR1 (ENSCAFG00845013671) #7	MUSK (ENSCAFG00845013555) #8	SVEP1 (ENSCAFG00845013295) #9	ENSCAFG00845013227 #10	ENSCAFG00845013183 #11	C9orf152 (ENSCAFG00845013069) #13	ENSCAFG00845013051	PALM2AKAP2 (ENSCAFG00845012812) #14	PTPN3 (ENSCAFG00845012416) #16	EPB41L4B (ENSCAFG00845012118) #19	FRRS1L (ENSCAFG00845012055) #20	TMEM245 (ENSCAFG00845011973) #21	CTNNAL1 (ENSCAFG00845011919) #22	ABITRAM (ENSCAFG00845011864) #23	ELP1 (ENSCAFG00845011728) #24	ACTL7A (ENSCAFG00845011684) #25	ACTL7B (ENSCAFG00845011671) #26	KLF4 (ENSCAFG00845011624) #30	RAD23B (ENSCAFG00845011556) #31	ZNF462 (ENSCAFG00845011443) #33	TMEM38B (ENSCAFG00845011350) #35	TAL2 (ENSCAFG00845011153) #36	FKTN (ENSCAFG00845011226) #37	FSD1L (ENSCAFG00845011014)	SLC44A1 (ENSCAFG00845010837)	ABCA1 (ENSCAFG00845010374)	ENSCAFG00845010284	NIPSNAP3A (ENSCAFG00845010079)
Red fox	MODERN SPECIES	42	ECPAS (ENSVVUG00000000339)	ENSVVUG00000028844	LPAR1 (ENSVVUG00000028841) #7	MUSK (ENSVVUG00000028836) #8	TXNDC8 (ENSVVUG00000028833) #9	TXN (ENSVVUG00000028831) #11	CUNH9orf152 (ENSVVUG00000028830) #13	PALM2AKAP2 (ENSVVUG00000028829)	ENSVVUG00000028827 #14	ENSVVUG00000028825	ENSVVUG00000028824	PTPN3 (ENSVVUG00000028561) #16	EPB41L4B (ENSVVUG00000028376) #19	ENSVVUG00000028364 #21	ENSVVUG00000028353 #21	ENSVVUG00000028349 #22	ENSVVUG00000028348	ENSVVUG00000028337 #23	ELP1 (ENSVVUG00000027495) #24	ACTL7A (ENSVVUG00000027420) #25	ACTL7B (ENSVVUG00000027419) #26	KLF4 (ENSVVUG00000027384) #30	RAD23B (ENSVVUG00000027357) #31	ZNF462 (ENSVVUG00000027344) #33	TMEM38B (ENSVVUG00000027339) #35	ENSVVUG00000027338 #36	FKTN (ENSVVUG00000027335) #37	FSD1L (ENSVVUG00000027331)	SLC44A1 (ENSVVUG00000027321)	ENSVVUG00000027315	ABCA1 (ENSVVUG00000027294)
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.b.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Mustelinae	ANCESTRAL SPECIES	22	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.b.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b.i.a
American mink	MODERN SPECIES	103	ECPAS (ENSNVIG00000008514)	OR2K2 (ENSNVIG00000008507)	LPAR1 (ENSNVIG00000008494) #7	MUSK (ENSNVIG00000008331) #8	SVEP1 (ENSNVIG00000008123) #9	ENSNVIG00000008030 #10	TXN (ENSNVIG00000008006) #11	C9orf152 (ENSNVIG00000007992) #13	PALM2AKAP2 (ENSNVIG00000007979)	ENSNVIG00000007909 #14	ENSNVIG00000007679 #16	ENSNVIG00000007521 #16	EPB41L4B (ENSNVIG00000007422) #19	FRRS1L (ENSNVIG00000007394) #20	TMEM245 (ENSNVIG00000007343) #21	CTNNAL1 (ENSNVIG00000007262) #22	F206A (ENSNVIG00000007243) #23	ELP1 (ENSNVIG00000007095) #24	ACTL7A (ENSNVIG00000007088) #25	ACTL7B (ENSNVIG00000007080) #26	ENSNVIG00000007072	KLF4 (ENSNVIG00000007021) #30	RAD23B (ENSNVIG00000006998) #31	ZNF462 (ENSNVIG00000006964) #33	TM38B (ENSNVIG00000006905) #35	TAL2 (ENSNVIG00000006900) #36	FKTN (ENSNVIG00000006856) #37	FSD1L (ENSNVIG00000006737)	SLC44A1 (ENSNVIG00000006652)	ABCA1 (ENSNVIG00000006505)	NIPSNAP3A (ENSNVIG00000006452)
Ferret	MODERN SPECIES	182	PTGR1 (ENSMPUG00000007639)	ENSMPUG00000007633	ECPAS (ENSMPUG00000007607)	OR2K2 (ENSMPUG00000018565)	LPAR1 (ENSMPUG00000007592) #7	MUSK (ENSMPUG00000007465) #8	SVEP1 (ENSMPUG00000007442) #9	ENSMPUG00000007435	TXN (ENSMPUG00000007426) #11	C9orf152 (ENSMPUG00000007416) #13	ENSMPUG00000007406 #14	PTPN3 (ENSMPUG00000007385) #16	EPB41L4B (ENSMPUG00000007365) #19	FRRS1L (ENSMPUG00000007340) #20	TMEM245 (ENSMPUG00000007317) #21	CTNNAL1 (ENSMPUG00000007294) #22	ABITRAM (ENSMPUG00000007283) #23	ELP1 (ENSMPUG00000007255) #24	ACTL7A (ENSMPUG00000018563) #25	ACTL7B (ENSMPUG00000018561) #26	ENSMPUG00000007252	ENSMPUG00000007243	KLF4 (ENSMPUG00000007236) #30	RAD23B (ENSMPUG00000007226) #31	ZNF462 (ENSMPUG00000007211) #33	TMEM38B (ENSMPUG00000007198) #35	FKTN (ENSMPUG00000007187) #37	FSD1L (ENSMPUG00000007163)	SLC44A1 (ENSMPUG00000007146)	ENSMPUG00000007112	NIPSNAP3B (ENSMPUG00000007103)
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.b.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00980000200950	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b
Giant Panda	MODERN SPECIES	17	ZNF483 (ENSAMEG00000017973)	ECPAS (ENSAMEG00000017975)	ENSAMEG00000026060	ENSAMEG00000023996	LPAR1 (ENSAMEG00000017994) #7	MUSK (ENSAMEG00000017995) #8	SVEP1 (ENSAMEG00000018006) #9	ENSAMEG00000026093 #10	ENSAMEG00000029699 #11	C9orf152 (ENSAMEG00000023662) #13	PALM2AKAP2 (ENSAMEG00000018021)	PTPN3 (ENSAMEG00000018026) #16	EPB41L4B (ENSAMEG00000018056) #19	FRRS1L (ENSAMEG00000018069) #20	TMEM245 (ENSAMEG00000018070) #21	CTNNAL1 (ENSAMEG00000016876) #22	ABITRAM (ENSAMEG00000016895) #23	ELP1 (ENSAMEG00000016902) #24	ACTL7A (ENSAMEG00000019972) #25	ACTL7B (ENSAMEG00000019973) #26	KLF4 (ENSAMEG00000016954) #30	RAD23B (ENSAMEG00000016970) #31	ZNF462 (ENSAMEG00000017007) #33	TMEM38B (ENSAMEG00000015226) #35	FKTN (ENSAMEG00000015197) #37	FSD1L (ENSAMEG00000015159)	SLC44A1 (ENSAMEG00000015137)	ENSAMEG00000029391	ABCA1 (ENSAMEG00000005131)	NIPSNAP3B (ENSAMEG00000010015)	ENSAMEG00000024816
Ursus	ANCESTRAL SPECIES	33	ENSGT00940000154810	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.b.a #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411.i #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Polar bear	MODERN SPECIES	311	PTGR1 (ENSUMAG00000019199)	ZNF483 (ENSUMAG00000019195)	ECPAS (ENSUMAG00000018058)	OR2K2 (ENSUMAG00000017725)	LPAR1 (ENSUMAG00000017706) #7	MUSK (ENSUMAG00000017614) #8	SVEP1 (ENSUMAG00000017327) #9	ENSUMAG00000017234 #10	ENSUMAG00000017226 #11	C9orf152 (ENSUMAG00000017222) #13	PALM2AKAP2 (ENSUMAG00000017212)	ENSUMAG00000017171 #14	PTPN3 (ENSUMAG00000016663) #16	EPB41L4B (ENSUMAG00000016551) #19	TMEM245 (ENSUMAG00000016484) #21	CTNNAL1 (ENSUMAG00000016247) #22	ABITRAM (ENSUMAG00000016202) #23	ELP1 (ENSUMAG00000014346) #24	ACTL7A (ENSUMAG00000014228) #25	ACTL7B (ENSUMAG00000014225) #26	ENSUMAG00000014214 #30	RAD23B (ENSUMAG00000014140) #31	ZNF462 (ENSUMAG00000014113) #33	TMEM38B (ENSUMAG00000014088) #35	TAL2 (ENSUMAG00000014084) #36	FKTN (ENSUMAG00000014076) #37	FSD1L (ENSUMAG00000014036)	SLC44A1 (ENSUMAG00000014026)	ABCA1 (ENSUMAG00000013207)	NIPSNAP3B (ENSUMAG00000013112)	NIPSNAP3A (ENSUMAG00000013107)
American black bear	MODERN SPECIES	1103																ENSUAMG00000026568 #22	ABITRAM (ENSUAMG00000026569) #23	ELP1 (ENSUAMG00000026570) #24	ACTL7A (ENSUAMG00000026571) #25	ACTL7B (ENSUAMG00000026572) #26
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Suina	ANCESTRAL SPECIES	23	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A.w #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00390000013344 #24	ENSGT00450000040303 #23	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b.a	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b
Chacoan peccary	MODERN SPECIES	887	ZNF483 (ENSCWAG00000019705)	ENSCWAG00000019723	ECPAS (ENSCWAG00000019772)	OR2K2 (ENSCWAG00000019993)	LPAR1 (ENSCWAG00000020004) #7	MUSK (ENSCWAG00000020056) #8	SVEP1 (ENSCWAG00000020300) #9	ENSCWAG00000020350 #10	TXN (ENSCWAG00000020414) #11	C9orf152 (ENSCWAG00000020432) #13	ENSCWAG00000020501 #14	PTPN3 (ENSCWAG00000020591) #16	EPB41L4B (ENSCWAG00000020732) #19	FRRS1L (ENSCWAG00000020802) #20	TMEM245 (ENSCWAG00000020813) #21	CTNNAL1 (ENSCWAG00000020848) #22	ELP1 (ENSCWAG00000020879) #24	ENSCWAG00000020928 #23	ACTL7A (ENSCWAG00000020943) #25	ACTL7B (ENSCWAG00000020950) #26	KLF4 (ENSCWAG00000011684) #30	ENSCWAG00000011795	RAD23B (ENSCWAG00000011869) #31	ZNF462 (ENSCWAG00000011929) #33	TMEM38B (ENSCWAG00000011994) #35	FKTN (ENSCWAG00000012077) #37	FSD1L (ENSCWAG00000012177)	SLC44A1 (ENSCWAG00000012312)	ABCA1 (ENSCWAG00000012416)	ENSCWAG00000012902	ENSCWAG00000013026
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Pecora	ANCESTRAL SPECIES	29	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b
Percora_a	ANCESTRAL SPECIES	29	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.k.a #30	ENSGT00940000156229.l #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a
Bovidae	ANCESTRAL SPECIES	14	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000016760.c.a.a.b	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a	ENSGT01040000240406.A.b.a.b
Bovinae	ANCESTRAL SPECIES	14	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000016760.c.a.a.b	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00550000074801.g.a	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.u #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000153700.ub.a.b	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b
Bos	ANCESTRAL SPECIES	10	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000016760.c.a.a.b	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00550000074801.g.a	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.u #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000153700.ub.a.b	ENSGT00940000160867 #36	ENSGT00390000014471.n #37	ENSGT01100000263480.a.a.b.a.b.b.b.b.a.b	ENSGT00940000157979	ENSGT00940000157174
Bos_b	ANCESTRAL SPECIES	37	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000016760.c.a.a.b	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00550000074801.g.a	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.u #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000153700.ub.a.b	ENSGT00940000160867 #36	ENSGT00390000014471.n #37	ENSGT01100000263480.a.a.b.a.b.b.b.b.a.b	ENSGT00940000157979	ENSGT00940000157174
Cow	MODERN SPECIES	27	ECPAS (ENSBTAG00000006712)	OR2K2 (ENSBTAG00000010686)	LPAR1 (ENSBTAG00000009654) #7	MUSK (ENSBTAG00000002744) #8	SVEP1 (ENSBTAG00000020243) #9	TXNDC8 (ENSBTAG00000010535) #10	TXN (ENSBTAG00000002953) #11	C8H9orf152 (ENSBTAG00000003240) #13	PALM2 (ENSBTAG00000014471) #14	PTPN3 (ENSBTAG00000018841) #16	ENSBTAG00000048854	EPB41L4B (ENSBTAG00000017063) #19	FRRS1L (ENSBTAG00000017936) #20	TMEM245 (ENSBTAG00000038794) #21	ENSBTAG00000051855	CTNNAL1 (ENSBTAG00000004997) #22	ABITRAM (ENSBTAG00000004996) #23	ELP1 (ENSBTAG00000004991) #24	ACTL7A (ENSBTAG00000019468) #25	ACTL7B (ENSBTAG00000019467) #26	ENSBTAG00000000885	KLF4 (ENSBTAG00000020355) #30	RAD23B (ENSBTAG00000001926) #31	ZNF462 (ENSBTAG00000019187) #33	TMEM38B (ENSBTAG00000034867) #35	ENSBTAG00000046079	TAL2 (ENSBTAG00000045852) #36	FKTN (ENSBTAG00000010247) #37	FSD1L (ENSBTAG00000013420)	SLC44A1 (ENSBTAG00000007163)	ABCA1 (ENSBTAG00000020661)
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005012056	ENSBIXG00005001251	LPAR1 (ENSBIXG00005012112) #7	MUSK (ENSBIXG00005012161) #8	ENSBIXG00005012228	SVEP1 (ENSBIXG00005012398) #9	ENSBIXG00005001334 #10	TXN (ENSBIXG00005012502) #11	C9orf152 (ENSBIXG00005006606) #13	PALM2AKAP2 (ENSBIXG00005001386)	PTPN3 (ENSBIXG00005012694) #16	ENSBIXG00005012733	EPB41L4B (ENSBIXG00005012891) #19	FRRS1L (ENSBIXG00005001465) #20	TMEM245 (ENSBIXG00005007480) #21	CTNNAL1 (ENSBIXG00005013056) #22	ABITRAM (ENSBIXG00005006334) #23	ELP1 (ENSBIXG00005013130) #24	ACTL7A (ENSBIXG00005001506) #25	ACTL7B (ENSBIXG00005013150) #26	ENSBIXG00005013170	ENSBIXG00005013228 #30	ENSBIXG00005001513 #31	ZNF462 (ENSBIXG00005013271) #33	TMEM38B (ENSBIXG00005007263) #35	TAL2 (ENSBIXG00005001578) #36	FKTN (ENSBIXG00005013381) #37	ENSBIXG00005013394	FSD1L (ENSBIXG00005001615)	SLC44A1 (ENSBIXG00005013552)	ABCA1 (ENSBIXG00005013615)
Bos_a	ANCESTRAL SPECIES	20	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000016760.c.a.a.b	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00550000074801.g.a	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.u #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000153700.ub.a.b	ENSGT00940000160867 #36	ENSGT00390000014471.n #37	ENSGT01100000263480.a.a.b.a.b.b.b.b.a.b	ENSGT00940000157979	ENSGT00940000157174
Domestic yak	MODERN SPECIES	26	LPAR1 (ENSBGRG00000003480) #7	MUSK (ENSBGRG00000003244) #8	SVEP1 (ENSBGRG00000002989) #9	ENSBGRG00000002929 #10	ENSBGRG00000002894 #11	C9orf152 (ENSBGRG00000002874) #13	PALM2AKAP2 (ENSBGRG00000002855)	ENSBGRG00000002825 #14	PTPN3 (ENSBGRG00000002691) #16	ENSBGRG00000002652	ENSBGRG00000002645	EPB41L4B (ENSBGRG00000002536) #19	FRRS1L (ENSBGRG00000002503) #20	TMEM245 (ENSBGRG00000002453) #21	ENSBGRG00000002441	CTNNAL1 (ENSBGRG00000002316) #22	ABITRAM (ENSBGRG00000002250) #23	ELP1 (ENSBGRG00000002162) #24	ACTL7A (ENSBGRG00000002145) #25	ACTL7B (ENSBGRG00000002132) #26	ENSBGRG00000002114	KLF4 (ENSBGRG00000002035) #30	RAD23B (ENSBGRG00000001998) #31	ZNF462 (ENSBGRG00000001958) #33	ENSBGRG00000001952	TMEM38B (ENSBGRG00000001913) #35	ENSBGRG00000001899	FKTN (ENSBGRG00000001805) #37	ENSBGRG00000001787	FSD1L (ENSBGRG00000001636)	ENSBGRG00000001591
American bison	MODERN SPECIES	3104	LPAR1 (ENSBBBG00000022319) #7	ENSBBBG00000005886	MUSK (ENSBBBG00000022436) #8	ENSBBBG00000007527	SVEP1 (ENSBBBG00000022798) #9	ENSBBBG00000022829 #10	TXN (ENSBBBG00000022850) #11	C9orf152 (ENSBBBG00000022856) #13	PALM2AKAP2 (ENSBBBG00000022860)	ENSBBBG00000022897 #14	PTPN3 (ENSBBBG00000023027) #16	ENSBBBG00000023041	EPB41L4B (ENSBBBG00000023101) #19	FRRS1L (ENSBBBG00000023138) #20	TMEM245 (ENSBBBG00000023171) #21	CTNNAL1 (ENSBBBG00000000468) #22	ABITRAM (ENSBBBG00000000448) #23	ELP1 (ENSBBBG00000000354) #24	ACTL7A (ENSBBBG00000000336) #25	ACTL7B (ENSBBBG00000000332) #26	ENSBBBG00000000324	ENSBBBG00000023186 #30	ENSBBBG00000023200 #31	ZNF462 (ENSBBBG00000006087) #33	TMEM38B (ENSBBBG00000023293) #35	ENSBBBG00000023309	TAL2 (ENSBBBG00000006095) #36	FKTN (ENSBBBG00000007481) #37	FSD1L (ENSBBBG00000023460)	SLC44A1 (ENSBBBG00000023558)	ABCA1 (ENSBBBG00000023632)
Caprinae	ANCESTRAL SPECIES	14	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00390000016760.c.a.a.b	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00550000074846.ab.b	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020000144	ECPAS (ENSOARG00020000236)	OR2K2 (ENSOARG00020000629)	LPAR1 (ENSOARG00020000672) #7	MUSK (ENSOARG00020000710) #8	SVEP1 (ENSOARG00020000799) #9	TXNDC8 (ENSOARG00020001073) #10	ENSOARG00020001199 #14	TXN (ENSOARG00020001360) #11	C9orf152 (ENSOARG00020001379) #13	PTPN3 (ENSOARG00020001469) #16	EPB41L4B (ENSOARG00020001692) #19	ENSOARG00020001762	FRRS1L (ENSOARG00020001767) #20	TMEM245 (ENSOARG00020001785) #21	CTNNAL1 (ENSOARG00020001849) #22	ABITRAM (ENSOARG00020001944) #23	ELP1 (ENSOARG00020001982) #24	ACTL7A (ENSOARG00020002049) #25	ACTL7B (ENSOARG00020002055) #26	ENSOARG00020002084 #30	RAD23B (ENSOARG00020002134) #31	ZNF462 (ENSOARG00020002167) #33	ENSOARG00020002259	TMEM38B (ENSOARG00020002286) #35	ENSOARG00020002304	FKTN (ENSOARG00020002326) #37	FSD1L (ENSOARG00020002376)	SLC44A1 (ENSOARG00020002424)	ENSOARG00020002669	ABCA1 (ENSOARG00020002682)
Goat	MODERN SPECIES	27	OR2K2 (ENSCHIG00000024856)	LPAR1 (ENSCHIG00000021183) #7	MUSK (ENSCHIG00000021059) #8	SVEP1 (ENSCHIG00000025957) #9	TXNDC8 (ENSCHIG00000026190) #10	TXN (ENSCHIG00000013447) #11	C9orf152 (ENSCHIG00000023217) #13	PALM2AKAP2 (ENSCHIG00000011730)	ENSCHIG00000025448 #14	ENSCHIG00000013623	PTPN3 (ENSCHIG00000019167) #16	ENSCHIG00000004878	EPB41L4B (ENSCHIG00000002945) #19	FRRS1L (ENSCHIG00000017152) #20	TMEM245 (ENSCHIG00000025870) #21	CTNNAL1 (ENSCHIG00000011937) #22	ENSCHIG00000002191 #23	ELP1 (ENSCHIG00000024936) #24	ACTL7A (ENSCHIG00000002414) #25	ACTL7B (ENSCHIG00000003048) #26	ENSCHIG00000017196 #30	RAD23B (ENSCHIG00000022567) #31	ZNF462 (ENSCHIG00000008945) #33	ENSCHIG00000008581	ENSCHIG00000021816	ENSCHIG00000014582	TMEM38B (ENSCHIG00000014855) #35	TAL2 (ENSCHIG00000012345) #36	FKTN (ENSCHIG00000009292) #37	ENSCHIG00000010528	FSD1L (ENSCHIG00000023178)
Yarkand deer	MODERN SPECIES	7	ECPAS (ENSCHYG00000008156)	LPAR1 (ENSCHYG00000008091) #7	MUSK (ENSCHYG00000007616) #8	SVEP1 (ENSCHYG00000007229) #9	TXNDC8 (ENSCHYG00000007029) #10	ENSCHYG00000006949 #11	C9orf152 (ENSCHYG00000006922) #13	ENSCHYG00000006895	ENSCHYG00000006654 #14	PTPN3 (ENSCHYG00000006180) #16	ENSCHYG00000006138	ENSCHYG00000006129	EPB41L4B (ENSCHYG00000006064) #19	FRRS1L (ENSCHYG00000006000) #20	TMEM245 (ENSCHYG00000005674) #21	CTNNAL1 (ENSCHYG00000005573) #22	ABITRAM (ENSCHYG00000005521) #23	ELP1 (ENSCHYG00000005409) #24	ACTL7A (ENSCHYG00000005384) #25	ACTL7B (ENSCHYG00000005375) #26	ENSCHYG00000005293 #30	ENSCHYG00000005257 #31	ZNF462 (ENSCHYG00000005203) #33	TMEM38B (ENSCHYG00000005131) #35	TAL2 (ENSCHYG00000005105) #36	FKTN (ENSCHYG00000005049) #37	FSD1L (ENSCHYG00000004973)	ENSCHYG00000004942	SLC44A1 (ENSCHYG00000004884)	ABCA1 (ENSCHYG00000004845)	NIPSNAP3A (ENSCHYG00000004835)
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b.a.a #11	ENSGT00940000154259.l.q.b.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00790000123099.ac	ENSGT00390000001319.nb.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.i.a #23	ENSGT00390000013344.t #24	ENSGT00450000040303.i.b #23	ENSGT00390000013344.s #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000015600.c.a.o	ENSGT00390000005254.i.a.b	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.r #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b.a.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00790000123099.ac	ENSGT00390000001319.nb.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.i.a.a.b #23	ENSGT00390000013344.t #24	ENSGT00450000040303.i.b #23	ENSGT00390000013344.s #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000015600.c.a.o	ENSGT00390000005254.i.a.b.d	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.r #31	ENSGT00390000012078.b.q #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00790000123099.ac	ENSGT00390000001319.nb.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.i.a.a.b #23	ENSGT00390000013344.t #24	ENSGT00450000040303.i.b #23	ENSGT00390000013344.s #24	ENSGT00940000162158.g #25	ENSGT00940000162582.a #26	ENSGT00390000015600.c.a.o	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.r #31	ENSGT00940000156411 #33	ENSGT00940000155366.a.hb.a	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b.b #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000161837 #14	ENSGT00790000123099.ac	ENSGT00390000001319.nb.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.i.a.a.b.b #23	ENSGT00450000040303.i.b #23	ENSGT00390000013344.s #24	ENSGT00940000162158.g #25	ENSGT00940000162582.a #26	ENSGT00390000015600.c.a.o	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.r #31	ENSGT00950000182901.a.a.b.b.a.a.d	ENSGT00940000156411 #33	ENSGT00940000155366.a.hb.a	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000162615	ENSGT00940000153612.A	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.b.a.b.b #11	ENSGT00390000005322 #13	ENSGT00940000161837 #14	ENSGT00790000123099.ac	ENSGT00390000001319.nb.b	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303.i.a.a.b.b #23	ENSGT00390000013344.s #24	ENSGT00940000162158.g #25	ENSGT00940000162582.a #26	ENSGT00390000015600.c.a.o	ENSGT00940000156229.k.a #30	ENSGT00390000012078.b.r #31	ENSGT00950000182901.a.a.b.b.a.a.d	ENSGT00940000156411 #33	ENSGT00940000155366.a.hb.a	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174
Narwhal	MODERN SPECIES	312	ZNF483 (ENSMMNG00015019363)	ECPAS (ENSMMNG00015019222)	LPAR1 (ENSMMNG00015019104) #7	MUSK (ENSMMNG00015018880) #8	SVEP1 (ENSMMNG00015018740) #9	ENSMMNG00015018628 #10	ENSMMNG00015018572 #11	C9orf152 (ENSMMNG00015018536) #13	ENSMMNG00015018334 #14	ENSMMNG00015018173	ENSMMNG00015018159	PTPN3 (ENSMMNG00015017954) #16	EPB41L4B (ENSMMNG00015017649) #19	FRRS1L (ENSMMNG00015017590) #20	TMEM245 (ENSMMNG00015017484) #21	CTNNAL1 (ENSMMNG00015017390) #22	ENSMMNG00015017369 #25	ENSMMNG00015017350 #26	ENSMMNG00015017328	ENSMMNG00015017315	KLF4 (ENSMMNG00015017268) #30	ENSMMNG00015017216 #31	ENSMMNG00015017196	ZNF462 (ENSMMNG00015017137) #33	ENSMMNG00015017099	TMEM38B (ENSMMNG00015016987) #35	TAL2 (ENSMMNG00015016959) #36	FKTN (ENSMMNG00015016876) #37	FSD1L (ENSMMNG00015016595)	ENSMMNG00015016537	SLC44A1 (ENSMMNG00015016458)
Vaquita	MODERN SPECIES	17	LPAR1 (ENSPSNG00000012287) #7	MUSK (ENSPSNG00000012408) #8	ENSPSNG00000013016 #9	ENSPSNG00000013248 #10	ENSPSNG00000013559 #11	C9orf152 (ENSPSNG00000013653) #13	PALM2AKAP2 (ENSPSNG00000013756)	ENSPSNG00000013958	ENSPSNG00000014013	PTPN3 (ENSPSNG00000014076) #16	EPB41L4B (ENSPSNG00000014333) #19	ENSPSNG00000014959	ENSPSNG00000015018	FRRS1L (ENSPSNG00000015057) #20	TMEM245 (ENSPSNG00000015113) #21	CTNNAL1 (ENSPSNG00000015319) #22	ENSPSNG00000015464 #23	ENSPSNG00000015561	ENSPSNG00000015579	ENSPSNG00000015628 #24	ENSPSNG00000015717 #23	ENSPSNG00000015757 #25	ACTL7B (ENSPSNG00000015822) #26	ENSPSNG00000015847	ENSPSNG00000015883	KLF4 (ENSPSNG00000006134) #30	RAD23B (ENSPSNG00000006231) #31	ENSPSNG00000006277	ZNF462 (ENSPSNG00000006317) #33	ENSPSNG00000006389	ENSPSNG00000006434
Dolphin	MODERN SPECIES	2899												PTPN3 (ENSTTRG00000000420) #16	EPB41L4B (ENSTTRG00000000418) #19	FRRS1L (ENSTTRG00000000417) #20	TMEM245 (ENSTTRG00000000416) #21	CTNNAL1 (ENSTTRG00000000415) #22	ENSTTRG00000000414 #23	ENSTTRG00000000413 #23	ENSTTRG00000000411 #24	ACTL7A (ENSTTRG00000000410) #25	ACTL7B (ENSTTRG00000000409) #26
Sperm whale	MODERN SPECIES	20	ZNF483 (ENSPCTG00005012775)	ECPAS (ENSPCTG00005012838)	LPAR1 (ENSPCTG00005013199) #7	MUSK (ENSPCTG00005013297) #8	SVEP1 (ENSPCTG00005014158) #9	ENSPCTG00005014360 #10	TXN (ENSPCTG00005014587) #11	C9H9orf152 (ENSPCTG00005014711) #13	ENSPCTG00005014777 #14	ENSPCTG00005015246	ENSPCTG00005015288	PTPN3 (ENSPCTG00005015329) #16	EPB41L4B (ENSPCTG00005015574) #19	FRRS1L (ENSPCTG00005016066) #20	TMEM245 (ENSPCTG00005016137) #21	CTNNAL1 (ENSPCTG00005016382) #22	ENSPCTG00005016554 #23	ENSPCTG00005016609 #23	ENSPCTG00005016694 #24	ENSPCTG00005016817 #23	ACTL7A (ENSPCTG00005016913) #25	ACTL7B (ENSPCTG00005016927) #26	ENSPCTG00005016945	ENSPCTG00005016962	KLF4 (ENSPCTG00005017002) #30	RAD23B (ENSPCTG00005017096) #31	ZNF462 (ENSPCTG00005017232) #33	TMEM38B (ENSPCTG00005017345) #35	TAL2 (ENSPCTG00005017406) #36	FKTN (ENSPCTG00005017444) #37	FSD1L (ENSPCTG00005017554)
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	17	ENSBMSG00010005285	ENSBMSG00010005277	LPAR1 (ENSBMSG00010005262) #7	MUSK (ENSBMSG00010005164) #8	SVEP1 (ENSBMSG00010005071) #9	ENSBMSG00010005021 #10	ENSBMSG00010005005 #11	C9orf152 (ENSBMSG00010004997) #13	PALM2AKAP2 (ENSBMSG00010004905)	ENSBMSG00010004868	ENSBMSG00010004865	PTPN3 (ENSBMSG00010004820) #16	EPB41L4B (ENSBMSG00010004773) #19	FRRS1L (ENSBMSG00010004752) #20	TMEM245 (ENSBMSG00010004728) #21	ENSBMSG00010004705 #22	ENSBMSG00010004692 #23	ELP1 (ENSBMSG00010004684) #24	ENSBMSG00010004678 #23	ACTL7A (ENSBMSG00010004670) #25	ACTL7B (ENSBMSG00010004666) #26	ENSBMSG00010004658	ENSBMSG00010004650	ENSBMSG00010004642	ENSBMSG00010004626 #30	ENSBMSG00010004608 #31	ZNF462 (ENSBMSG00010004577) #33	ENSBMSG00010004562	ENSBMSG00010004552	TMEM38B (ENSBMSG00010004523) #35	TAL2 (ENSBMSG00010004504) #36
Blue whale	MODERN SPECIES		SLC35A3 (ENSBMSG00010002633)	MFSD14A (ENSBMSG00010003164)	SASS6 (ENSBMSG00010003211)	TRMT13 (ENSBMSG00010003252)	LRRC39 (ENSBMSG00010003331)	DBT (ENSBMSG00010003342)	RTCA (ENSBMSG00010003361)	CDC14A (ENSBMSG00010003418)	GPR88 (ENSBMSG00010003474)	ENSBMSG00010003498	EXTL2 (ENSBMSG00010003690)	SLC30A7 (ENSBMSG00010003707)	DPH5 (ENSBMSG00010003725)	ENSBMSG00010003742	ENSBMSG00010003751	ENSBMSG00010003754 #22	S1PR1 (ENSBMSG00010003770)	ENSBMSG00010003778	OLFM3 (ENSBMSG00010003798)	ENSBMSG00010003840	COL11A1 (ENSBMSG00010003909)	ENSBMSG00010004098	RNPC3 (ENSBMSG00010004114)	ENSBMSG00010004127	ENSBMSG00010004150	ENSBMSG00010004162	PRMT6 (ENSBMSG00010004173)	NTNG1 (ENSBMSG00010004205)	VAV3 (ENSBMSG00010004383)	ENSBMSG00010004441	SLC25A24 (ENSBMSG00010004461)
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259.l.q.a.a #11	ENSGT00940000154259.l.q.a.b #11	ENSGT00390000005322 #13	ENSGT00940000161837 #14	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT00950000183018.b.k.a
Arabian camel	MODERN SPECIES	30	ZNF483 (ENSCDRG00005006538)	ENSCDRG00005006546	ECPAS (ENSCDRG00005006589)	OR2K2 (ENSCDRG00005006951)	LPAR1 (ENSCDRG00005006977) #7	MUSK (ENSCDRG00005007069) #8	SVEP1 (ENSCDRG00005008459) #9	ENSCDRG00005008714 #10	ENSCDRG00005009128 #11	C9orf152 (ENSCDRG00005009216) #13	ENSCDRG00005009265 #14	PTPN3 (ENSCDRG00005009897) #16	EPB41L4B (ENSCDRG00005010219) #19	FRRS1L (ENSCDRG00005010771) #20	TMEM245 (ENSCDRG00005010838) #21	CTNNAL1 (ENSCDRG00005011053) #22	ABITRAM (ENSCDRG00005011244) #23	ELP1 (ENSCDRG00005011319) #24	ACTL7A (ENSCDRG00005011517) #25	ACTL7B (ENSCDRG00005011545) #26	ENSCDRG00005011578	KLF4 (ENSCDRG00005011635) #30	RAD23B (ENSCDRG00005011699) #31	ZNF462 (ENSCDRG00005011818) #33	TMEM38B (ENSCDRG00005011931) #35	TAL2 (ENSCDRG00005012027) #36	FKTN (ENSCDRG00005012053) #37	FSD1L (ENSCDRG00005012193)	SLC44A1 (ENSCDRG00005012919)	ABCA1 (ENSCDRG00005013099)	NIPSNAP3A (ENSCDRG00005013552)
Alpaca	MODERN SPECIES	2490													EPB41L4B (ENSVPAG00000007125) #19	FRRS1L (ENSVPAG00000007124) #20	TMEM245 (ENSVPAG00000007123) #21	CTNNAL1 (ENSVPAG00000007121) #22	ENSVPAG00000007120 #23	ELP1 (ENSVPAG00000007116) #24	ACTL7A (ENSVPAG00000007115) #25
Atlantogenata	ANCESTRAL SPECIES	12	ENSGT00940000162615	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259 #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT01040000240406.A.b.a.b
Xenarthra	ANCESTRAL SPECIES	540												ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26
Armadillo	MODERN SPECIES	3556											ENSDNOG00000048619	PTPN3 (ENSDNOG00000011270) #16	EPB41L4B (ENSDNOG00000016315) #19	FRRS1L (ENSDNOG00000013702) #20	ENSDNOG00000040850 #21	CTNNAL1 (ENSDNOG00000013645) #22	ABITRAM (ENSDNOG00000006722) #23	ELP1 (ENSDNOG00000017396) #24	ENSDNOG00000043531	ENSDNOG00000036182	ACTL7A (ENSDNOG00000041548) #25	ACTL7B (ENSDNOG00000032343) #26	ENSDNOG00000047503
Sloth	MODERN SPECIES	1740																CTNNAL1 (ENSCHOG00000001871) #22	ABITRAM (ENSCHOG00000001869) #23
Afrotheria	ANCESTRAL SPECIES		ENSGT00940000162615	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259 #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT01040000240406.A.b.a.b
Tenrec	MODERN SPECIES	4299																CTNNAL1 (ENSETEG00000011642) #22	ABITRAM (ENSETEG00000011641) #23	ELP1 (ENSETEG00000011634) #24
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00940000162615	ENSGT00940000154740.a.a.c.a	ENSGT00940000153612.A	ENSGT01040000240406.A.b.b	ENSGT01050000244941.A #7	ENSGT00940000158226 #8	ENSGT00940000156061 #9	ENSGT00940000162445 #10	ENSGT00940000154259 #11	ENSGT00390000005322 #13	ENSGT00930000151059	ENSGT00940000157888 #16	ENSGT00940000158331 #19	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00940000156229 #30	ENSGT00390000012078.b #31	ENSGT00940000156411 #33	ENSGT00390000018845.e #35	ENSGT00940000160867 #36	ENSGT00390000014471 #37	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b	ENSGT01040000240406.A.b.a.b
Elephant	MODERN SPECIES	472	PTGR1 (ENSLAFG00000014157)	ENSLAFG00000014150	ECPAS (ENSLAFG00000028895)	OR2K2 (ENSLAFG00000012372)	LPAR1 (ENSLAFG00000012624) #7	MUSK (ENSLAFG00000015335) #8	SVEP1 (ENSLAFG00000015893) #9	ENSLAFG00000028348 #10	TXN (ENSLAFG00000012856) #11	C9orf152 (ENSLAFG00000023199) #13	PALM2AKAP2 (ENSLAFG00000003658)	PTPN3 (ENSLAFG00000001914) #16	EPB41L4B (ENSLAFG00000006820) #19	FRRS1L (ENSLAFG00000006816) #20	TMEM245 (ENSLAFG00000006807) #21	CTNNAL1 (ENSLAFG00000006798) #22	ABITRAM (ENSLAFG00000006796) #23	ELP1 (ENSLAFG00000000736) #24	ACTL7A (ENSLAFG00000000735) #25	ACTL7B (ENSLAFG00000008993) #26	KLF4 (ENSLAFG00000000421) #30	RAD23B (ENSLAFG00000007533) #31	ZNF462 (ENSLAFG00000012314) #33	ENSLAFG00000031851	TMEM38B (ENSLAFG00000032575) #35	ENSLAFG00000025752	TAL2 (ENSLAFG00000008309) #36	FKTN (ENSLAFG00000021811) #37	FSD1L (ENSLAFG00000007639)	SLC44A1 (ENSLAFG00000000191)	ABCA1 (ENSLAFG00000015516)
Hyrax	MODERN SPECIES	5487																CTNNAL1 (ENSPCAG00000004521) #22	ABITRAM (ENSPCAG00000004485) #23	ELP1 (ENSPCAG00000004316) #24
Marsupialia	ANCESTRAL SPECIES	6	ENSGT01040000240406.A.b.a.a.a.a.b.a	ENSGT01040000240406.A.b.a.a.a.b.b	ENSGT01040000240406.A.b.a.b.a.a.a.a.a	ENSGT01040000240406.A.a	ENSGT01040000240406.A.b.a.a.b.i.a.a.b	ENSGT01040000240406.A.b.a.a.b.i.b	ENSGT01040000240406.A.b.a.a.a.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.b.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.b.a	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.a.b	ENSGT00940000159937	ENSGT00940000155598	ENSGT00940000161010	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00940000157173
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT01040000240406.A.b.a.a.b.j	ENSGT01040000240406.A.b.a.a.a.a.b.a	ENSGT01040000240406.A.b.a.a.a.b.b	ENSGT01040000240406.A.b.a.b.a.a.a.a.a	ENSGT01040000240406.A.b.a.b.b	ENSGT01040000240406.A.b.a.a.b.i.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.b.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.b.a	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.a.b	ENSGT00940000159937	ENSGT00940000155598	ENSGT00940000161010	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00940000157173
Diprotodontia	ANCESTRAL SPECIES	21							ENSGT01040000240406.A.b.a.b.b	ENSGT01040000240406.A.b.a.a.b.i.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.a.b	ENSGT00940000159937	ENSGT00940000155598	ENSGT00940000161010	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00940000157173
Diprotodontia_a	ANCESTRAL SPECIES	17	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b	ENSGT01040000240406.A.b.a.a.a.a.b.b	ENSGT01040000240406.A.b.a.a.a.b.a.b	ENSGT01040000240406.A.b.a.b.a.a.a.a.a	ENSGT01040000240406.A.b.a.b.b	ENSGT01040000240406.A.b.a.a.b.i.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.b	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.a.b	ENSGT00940000159937	ENSGT00940000155598	ENSGT00940000161010	ENSGT00940000159043 #20	ENSGT00390000001667 #21	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00390000013344 #24	ENSGT00940000162158 #25	ENSGT00940000162582 #26	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00940000157173
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1066										ENSVURG00010017252	ENSVURG00010017217	ENSVURG00010017177	ENSVURG00010017158	ENSVURG00010017150 #20	ENSVURG00010016925 #21	ENSVURG00010016892 #22	ENSVURG00010016885 #23	ENSVURG00010016835 #24	ENSVURG00010016814 #25	ENSVURG00010016808 #26	ENSVURG00010016793	ENSVURG00010016780	ENSVURG00010016764	ENSVURG00010016751	ENSVURG00010016739	ENSVURG00010016728	ENSVURG00010016712	ENSVURG00010016707	ENSVURG00010016697	ENSVURG00010016686	ENSVURG00010016646
Common wonbat	MODERN SPECIES	1066	PTBP3 (ENSVURG00010005730)	SUSD1 (ENSVURG00010005628)	UGCG (ENSVURG00010005532)	ENSVURG00010005496	DNAJC25 (ENSVURG00010005487)	ECPAS (ENSVURG00010005378)	ABCC6 (ENSVURG00010003622)	ENSVURG00010003249	XYLT1 (ENSVURG00010003026)	ENSVURG00010002878	ENSVURG00010002850	ENSVURG00010002822	ENSVURG00010002803	ENSVURG00010002785 #20	ENSVURG00010002287 #21	ENSVURG00010002216 #22	ENSVURG00010002194 #23	ENSVURG00010002149 #24	ENSVURG00010002131 #25	ENSVURG00010002120 #26	ENSVURG00010002042	ENSVURG00010002016	ENSVURG00010001967	ENSVURG00010001910	ENSVURG00010001888	ENSVURG00010001827	ENSVURG00010001782	ENSVURG00010001761	ENSVURG00010001751	ENSVURG00010001697	ENSVURG00010001572
koala	MODERN SPECIES	59	ENSPCIG00000032835	ENSPCIG00000031318	ENSPCIG00000036317	ENSPCIG00000035051	ENSPCIG00000037469	ENSPCIG00000014112	ENSPCIG00000026694	ENSPCIG00000026685	ENSPCIG00000026687	ENSPCIG00000037263	ENSPCIG00000030853	CORO2A (ENSPCIG00000028004)	TRIM14 (ENSPCIG00000028007)	FRRS1L (ENSPCIG00000028010) #20	TMEM245 (ENSPCIG00000018923) #21	CTNNAL1 (ENSPCIG00000019042) #22	ABITRAM (ENSPCIG00000037040) #23	ELP1 (ENSPCIG00000013392) #24	ACTL7A (ENSPCIG00000013409) #25	ACTL7B (ENSPCIG00000026064) #26	MSANTD3 (ENSPCIG00000026065)	TEX10 (ENSPCIG00000026066)	INVS (ENSPCIG00000026067)	ERP44 (ENSPCIG00000026488)	ENSPCIG00000026489	NR4A3 (ENSPCIG00000025397)	ENSPCIG00000014397	SEC61B (ENSPCIG00000000880)	ALG2 (ENSPCIG00000000867)	TGFBR1 (ENSPCIG00000000853)	ENSPCIG00000000782
Wallaby	MODERN SPECIES	2784																CTNNAL1 (ENSMEUG00000013646) #22	ENSMEUG00000013637 #23
Tasmanian devil	MODERN SPECIES		ENSSHAG00000005301	ENSSHAG00000005515	ENSSHAG00000025813	ENSSHAG00000027976	ENSSHAG00000031342	ENSSHAG00000001047	ENSSHAG00000026091	ENSSHAG00000001673	ENSSHAG00000000019	ENSSHAG00000001168	ENSSHAG00000021544	ENSSHAG00000001339	ENSSHAG00000005409	ENSSHAG00000030177 #20	TMEM245 (ENSSHAG00000006624) #21	CTNNAL1 (ENSSHAG00000008270) #22	ABITRAM (ENSSHAG00000008834) #23	ELP1 (ENSSHAG00000008964) #24	ENSSHAG00000009471 #25	ENSSHAG00000009535 #26	ENSSHAG00000030809	TEX10 (ENSSHAG00000010223)	INVS (ENSSHAG00000025620)	ERP44 (ENSSHAG00000012181)	STX17 (ENSSHAG00000030239)	NR4A3 (ENSSHAG00000013487)	SEC61B (ENSSHAG00000023694)	ALG2 (ENSSHAG00000021066)	TGFBR1 (ENSSHAG00000016699)	COL15A1 (ENSSHAG00000016845)	ENSSHAG00000017474
Opossum	MODERN SPECIES	5	ENSMODG00000047517	ENSMODG00000049121	ENSMODG00000038542	ENSMODG00000012442	ENSMODG00000024661	ENSMODG00000012447	ENSMODG00000044228	ENSMODG00000012496	ENSMODG00000012510	ENSMODG00000024660	TBC1D2 (ENSMODG00000012530)	CORO2A (ENSMODG00000012537)	TRIM14 (ENSMODG00000012543)	FRRS1L (ENSMODG00000012547) #20	TMEM245 (ENSMODG00000012553) #21	CTNNAL1 (ENSMODG00000012562) #22	ENSMODG00000012563 #23	ELP1 (ENSMODG00000012603) #24	ACTL7A (ENSMODG00000024654) #25	ACTL7B (ENSMODG00000024653) #26	ENSMODG00000042481	MSANTD3 (ENSMODG00000044497)	TEX10 (ENSMODG00000012618)	INVS (ENSMODG00000012633)	ERP44 (ENSMODG00000012640)	STX17 (ENSMODG00000012645)	NR4A3 (ENSMODG00000012660)	ENSMODG00000027487	ENSMODG00000044791	SEC61B (ENSMODG00000012664)	ALG2 (ENSMODG00000040576)
Sauria	ANCESTRAL SPECIES	92												ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
Cryptodira	ANCESTRAL SPECIES	46	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000158616	ENSGT00530000063884.a	ENSGT00940000153875.c	ENSGT00940000161608	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00940000156325	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a.e	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00940000156325	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a.e	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Goode s thornscrub tortoise	MODERN SPECIES	11	SLC6A19 (ENSGEVG00005002227)	SLC6A18 (ENSGEVG00005002163)	TERT (ENSGEVG00005002124)	CLPTM1L (ENSGEVG00005002056)	LPCAT1 (ENSGEVG00005002021)	MRPL36 (ENSGEVG00005002011)	NDUFS6 (ENSGEVG00005002002)	IRX4 (ENSGEVG00005001991)	IRX2 (ENSGEVG00005001979)	IRX1 (ENSGEVG00005001973)	ANKS6 (ENSGEVG00005001910)	GALNT12 (ENSGEVG00005001835)	GABBR2 (ENSGEVG00005001782)	ELP2 (ENSGEVG00005001729)	ENSGEVG00005001694	CTNNAL1 (ENSGEVG00005001665) #22	ABITRAM (ENSGEVG00005001645) #23	SLC39A6 (ENSGEVG00005001621)	TMEFF1 (ENSGEVG00005001596)	CAVIN4 (ENSGEVG00005001574)	ENSGEVG00005001492	EXOC3 (ENSGEVG00005001436)	PDCD6 (ENSGEVG00005001415)	ENSGEVG00005001384	ENSGEVG00005001364	ENSGEVG00005001347	MSANTD3 (ENSGEVG00005001340)	ENSGEVG00005001292	TEX10 (ENSGEVG00005001259)	INVS (ENSGEVG00005001220)	ERP44 (ENSGEVG00005001181)
Abingdon island giant tortoise	MODERN SPECIES	391												ENSCABG00000006060	GABBR2 (ENSCABG00000006061)	ELP2 (ENSCABG00000006063)	ENSCABG00000006065	CTNNAL1 (ENSCABG00000006070) #22	ABITRAM (ENSCABG00000006179) #23	SLC39A6 (ENSCABG00000006180)	TMEFF1 (ENSCABG00000006196)	CAVIN4 (ENSCABG00000006199)	ENSCABG00000006206	ENSCABG00000006208
Emydidae	ANCESTRAL SPECIES	58	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a.e	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739
painted turtle	MODERN SPECIES	718										INO80C (ENSCPBG00000003222)	GALNT1 (ENSCPBG00000003192)	C18orf21 (ENSCPBG00000003154)	RPRD1A (ENSCPBG00000003126)	FHOD3 (ENSCPBG00000002983)	ENSCPBG00000002931	CTNNAL1 (ENSCPBG00000002865) #22	ABITRAM (ENSCPBG00000002839) #23	SLC39A6 (ENSCPBG00000002831)	TMEFF1 (ENSCPBG00000002816)	CAVIN4 (ENSCPBG00000002800)	ENSCPBG00000001941	EXOC3 (ENSCPBG00000001725)	PDCD6 (ENSCPBG00000001714)	ENSCPBG00000001692	AHRR (ENSCPBG00000001668)	MSANTD3 (ENSCPBG00000001654)	ENSCPBG00000001630	TRIP13 (ENSCPBG00000001609)	BRD9 (ENSCPBG00000001460)	ENSCPBG00000001409	TPPP (ENSCPBG00000001388)
Three-toed box turtle	MODERN SPECIES	297	SLC6A19 (ENSTMTG00000008610)	SLC6A18 (ENSTMTG00000008435)	TERT (ENSTMTG00000008335)	CLPTM1L (ENSTMTG00000008296)	LPCAT1 (ENSTMTG00000008129)	MRPL36 (ENSTMTG00000008109)	NDUFS6 (ENSTMTG00000008090)	IRX4 (ENSTMTG00000008074)	IRX2 (ENSTMTG00000008066)	IRX1 (ENSTMTG00000008055)	ANKS6 (ENSTMTG00000008027)	GALNT12 (ENSTMTG00000008007)	ENSTMTG00000007997	GABBR2 (ENSTMTG00000007941)	ELP2 (ENSTMTG00000007883)	CTNNAL1 (ENSTMTG00000007394) #22	ABITRAM (ENSTMTG00000007325) #23	ENSTMTG00000007307	TMEFF1 (ENSTMTG00000007279)	CAVIN4 (ENSTMTG00000007267)	ENSTMTG00000007098	ENSTMTG00000007047	PDCD6 (ENSTMTG00000007032)	ENSTMTG00000007005	ENSTMTG00000006975	ENSTMTG00000006964	MSANTD3 (ENSTMTG00000006954)	ENSTMTG00000006916
Chinese turtle	MODERN SPECIES	845														GABBR2 (ENSPSIG00000008629)	ELP2 (ENSPSIG00000009430)	CTNNAL1 (ENSPSIG00000009870) #22	ABITRAM (ENSPSIG00000008424) #23	SLC39A6 (ENSPSIG00000008571)	ENSPSIG00000001946
Archosauria	ANCESTRAL SPECIES		ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000154136.k.b	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
Australian saltwater crocodile	MODERN SPECIES		SLC6A18 (ENSCPRG00005014172)	TERT (ENSCPRG00005014163)	CLPTM1L (ENSCPRG00005014157)	LPCAT1 (ENSCPRG00005014149)	ENSCPRG00005014130	MRPL36 (ENSCPRG00005014128)	NDUFS6 (ENSCPRG00005014126)	IRX4 (ENSCPRG00005014121)	IRX2 (ENSCPRG00005014100)	ENSCPRG00005014091	IRX1 (ENSCPRG00005014090)	ANKS6 (ENSCPRG00005014063)	GALNT12 (ENSCPRG00005014054)	GABBR2 (ENSCPRG00005014003)	ELP2 (ENSCPRG00005013943)	CTNNAL1 (ENSCPRG00005013933) #22	ABITRAM (ENSCPRG00005013924) #23	SLC39A6 (ENSCPRG00005013917)	TMEFF1 (ENSCPRG00005013909)	CAVIN4 (ENSCPRG00005013897)	ENSCPRG00005013852	EXOC3 (ENSCPRG00005013824)	PDCD6 (ENSCPRG00005013819)	ENSCPRG00005013812	ENSCPRG00005013811	MSANTD3 (ENSCPRG00005013789)	TEX10 (ENSCPRG00005013615)	INVS (ENSCPRG00005013524)	ERP44 (ENSCPRG00005013492)	STX17 (ENSCPRG00005013486)	NR4A3 (ENSCPRG00005013476)
Aves	ANCESTRAL SPECIES	24	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
African ostrich	MODERN SPECIES	872															ELP2 (ENSSCUG00000015169)	CTNNAL1 (ENSSCUG00000015156) #22	ABITRAM (ENSSCUG00000015154) #23	SLC39A6 (ENSSCUG00000015151)	TMEFF1 (ENSSCUG00000015145)	CAVIN4 (ENSSCUG00000015143)	ENSSCUG00000015021	EXOC3 (ENSSCUG00000014947)	PDCD6 (ENSSCUG00000014944)	AHRR (ENSSCUG00000014931)	MSANTD3 (ENSSCUG00000014925)
Neognathae	ANCESTRAL SPECIES		ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906.a	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Golden eagle	MODERN SPECIES	20	CCDC127 (ENSACCG00020002460)	SLC6A19 (ENSACCG00020002448)	SLC6A18 (ENSACCG00020002420)	TERT (ENSACCG00020002389)	CLPTM1L (ENSACCG00020002343)	LPCAT1 (ENSACCG00020002316)	MRPL36 (ENSACCG00020002294)	NDUFS6 (ENSACCG00020002276)	IRX4 (ENSACCG00020002253)	IRX2 (ENSACCG00020002240)	IRX1 (ENSACCG00020002227)	ANKS6 (ENSACCG00020002206)	GALNT12 (ENSACCG00020002189)	GABBR2 (ENSACCG00020002159)	ELP2 (ENSACCG00020002077)	CTNNAL1 (ENSACCG00020001909) #22	ABITRAM (ENSACCG00020001871) #23	SLC39A6 (ENSACCG00020001853)	TMEFF1 (ENSACCG00020001829)	CAVIN4 (ENSACCG00020001810)	ENSACCG00020001721	EXOC3 (ENSACCG00020001660)	PDCD6 (ENSACCG00020001652)	ENSACCG00020001606	AHRR (ENSACCG00020001585)	MSANTD3 (ENSACCG00020001575)	ENSACCG00020001540	TEX10 (ENSACCG00020001504)	INVS (ENSACCG00020001453)	ERP44 (ENSACCG00020001405)	STX17 (ENSACCG00020001389)
Kakapo	MODERN SPECIES		SLC6A19 (ENSSHBG00005004758)	ENSSHBG00005004751	ENSSHBG00005004747	TERT (ENSSHBG00005004728)	CLPTM1L (ENSSHBG00005004718)	LPCAT1 (ENSSHBG00005004713)	MRPL36 (ENSSHBG00005004708)	NDUFS6 (ENSSHBG00005004706)	IRX4 (ENSSHBG00005004696)	IRX2 (ENSSHBG00005004691)	IRX1 (ENSSHBG00005004687)	ANKS6 (ENSSHBG00005004676)	GALNT12 (ENSSHBG00005004664)	GABBR2 (ENSSHBG00005004651)	ELP2 (ENSSHBG00005004608)	CTNNAL1 (ENSSHBG00005004549) #22	ABITRAM (ENSSHBG00005004522) #23	SLC39A6 (ENSSHBG00005004518)	TMEFF1 (ENSSHBG00005004514)	EXOC3 (ENSSHBG00005004507)	ENSSHBG00005004380	PDCD6 (ENSSHBG00005004308)	ENSSHBG00005004302	AHRR (ENSSHBG00005004297)	ENSSHBG00005004288	ENSSHBG00005004283	MSANTD3 (ENSSHBG00005004280)	ENSSHBG00005004270	TEX10 (ENSSHBG00005004257)	INVS (ENSSHBG00005004242)	ERP44 (ENSSHBG00005004230)
Passeriformes	ANCESTRAL SPECIES		ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Zebra finch	MODERN SPECIES	12	SLC6A19 (ENSTGUG00000008297)	ENSTGUG00000019604	SLC6A18 (ENSTGUG00000008357)	TERT (ENSTGUG00000008383)	CLPTM1L (ENSTGUG00000008431)	LPCAT1 (ENSTGUG00000008465)	ENSTGUG00000029505	NDUFS6 (ENSTGUG00000008501)	IRX4 (ENSTGUG00000008502)	IRX2 (ENSTGUG00000008512)	IRX1 (ENSTGUG00000008517)	ANKS6 (ENSTGUG00000008519)	GALNT12 (ENSTGUG00000008525)	GABBR2 (ENSTGUG00000008527)	ELP2 (ENSTGUG00000008552)	CTNNAL1 (ENSTGUG00000008579) #22	ABITRAM (ENSTGUG00000027899) #23	SLC39A6 (ENSTGUG00000008614)	CAVIN4 (ENSTGUG00000008631)	TMEFF1 (ENSTGUG00000019480)	ENSTGUG00000008651	EXOC3 (ENSTGUG00000008684)	PDCD6 (ENSTGUG00000008718)	ENSTGUG00000027181	AHRR (ENSTGUG00000008731)	MSANTD3 (ENSTGUG00000008752)	ENSTGUG00000008753	TEX10 (ENSTGUG00000008765)	INVS (ENSTGUG00000008787)	ERP44 (ENSTGUG00000008812)	STX17 (ENSTGUG00000008839)
Common canary	MODERN SPECIES		SDHA (ENSSCAG00000005992)	CCDC127 (ENSSCAG00000005996)	ENSSCAG00000006000	SLC6A19 (ENSSCAG00000006002)	SLC6A18 (ENSSCAG00000006008)	TERT (ENSSCAG00000006016)	CLPTM1L (ENSSCAG00000006166)	LPCAT1 (ENSSCAG00000006706)	NDUFS6 (ENSSCAG00000006716)	IRX2 (ENSSCAG00000006758)	IRX1 (ENSSCAG00000006799)	ANKS6 (ENSSCAG00000006820)	GALNT12 (ENSSCAG00000006835)	GABBR2 (ENSSCAG00000006879)	ELP2 (ENSSCAG00000006913)	CTNNAL1 (ENSSCAG00000007070) #22	ABITRAM (ENSSCAG00000007076) #23	SLC39A6 (ENSSCAG00000007081)	TMEFF1 (ENSSCAG00000007128)	CAVIN4 (ENSSCAG00000007134)	ENSSCAG00000007142	ENSSCAG00000007152	ENSSCAG00000007157	EXOC3 (ENSSCAG00000007160)	PDCD6 (ENSSCAG00000007167)	ENSSCAG00000007173	AHRR (ENSSCAG00000007182)	MSANTD3 (ENSSCAG00000007199)	ENSSCAG00000007201	TEX10 (ENSSCAG00000007212)	INVS (ENSSCAG00000007225)
Medium ground finch	MODERN SPECIES	14	CHMP5 (ENSGFOG00000006293)	FH (ENSGFOG00000006310)	SDHA (ENSGFOG00000006362)	CCDC127 (ENSGFOG00000006456)	SLC6A19 (ENSGFOG00000006461)	SLC6A18 (ENSGFOG00000006480)	TERT (ENSGFOG00000006576)	CLPTM1L (ENSGFOG00000006505)	LPCAT1 (ENSGFOG00000006604)	NDUFS6 (ENSGFOG00000006614)	IRX1 (ENSGFOG00000006628)	ANKS6 (ENSGFOG00000006632)	GALNT12 (ENSGFOG00000006649)	GABBR2 (ENSGFOG00000006665)	ELP2 (ENSGFOG00000006752)	CTNNAL1 (ENSGFOG00000007748) #22	ABITRAM (ENSGFOG00000007792) #23	SLC39A6 (ENSGFOG00000007800)	TMEFF1 (ENSGFOG00000007820)	CAVIN4 (ENSGFOG00000008119)	ENSGFOG00000008125	ENSGFOG00000008140	ENSGFOG00000008146	EXOC3 (ENSGFOG00000008158)	PDCD6 (ENSGFOG00000000173)	ENSGFOG00000000179	AHRR (ENSGFOG00000000350)	MSANTD3 (ENSGFOG00000000359)	ENSGFOG00000000367	TEX10 (ENSGFOG00000000382)	INVS (ENSGFOG00000000400)
Flycatcher	MODERN SPECIES	11	ENSFALG00000026970	SLC6A19 (ENSFALG00000002139)	SLC6A18 (ENSFALG00000023064)	TERT (ENSFALG00000002146)	CLPTM1L (ENSFALG00000002158)	LPCAT1 (ENSFALG00000002161)	NDUFS6 (ENSFALG00000025260)	ENSFALG00000005258	ENSFALG00000024150	IRX2 (ENSFALG00000005243)	IRX1 (ENSFALG00000005225)	ENSFALG00000005213	ENSFALG00000005188	ENSFALG00000005156	ENSFALG00000005125	CTNNAL1 (ENSFALG00000026527) #22	ENSFALG00000028605 #23	ENSFALG00000005077	ENSFALG00000005068	ENSFALG00000024903	ENSFALG00000004948	ENSFALG00000004894	ENSFALG00000025107	ENSFALG00000004890	ENSFALG00000004887	ENSFALG00000004883	MSANTD3 (ENSFALG00000004875)	ENSFALG00000023421	TEX10 (ENSFALG00000004847)	INVS (ENSFALG00000004814)	ERP44 (ENSFALG00000004800)
Great tit	MODERN SPECIES	11	SLC6A19 (ENSPMJG00000013739)	SLC6A18 (ENSPMJG00000013740)	TERT (ENSPMJG00000013741)	CLPTM1L (ENSPMJG00000013790)	LPCAT1 (ENSPMJG00000013791)	MRPL36 (ENSPMJG00000013793)	ENSPMJG00000013796	IRX4 (ENSPMJG00000013824)	IRX2 (ENSPMJG00000013858)	IRX1 (ENSPMJG00000013883)	ANKS6 (ENSPMJG00000013912)	GALNT12 (ENSPMJG00000013925)	GABBR2 (ENSPMJG00000013983)	ENSPMJG00000013984	ELP2 (ENSPMJG00000013985)	CTNNAL1 (ENSPMJG00000013995) #22	SLC39A6 (ENSPMJG00000014000)	TMEFF1 (ENSPMJG00000014029)	CAVIN4 (ENSPMJG00000014030)	ENSPMJG00000014031	EXOC3 (ENSPMJG00000014032)	PDCD6 (ENSPMJG00000014033)	ENSPMJG00000014062	AHRR (ENSPMJG00000014064)	MSANTD3 (ENSPMJG00000014067)	ENSPMJG00000014069	TEX10 (ENSPMJG00000014070)	INVS (ENSPMJG00000014119)	ERP44 (ENSPMJG00000014122)	STX17 (ENSPMJG00000014124)	NR4A3 (ENSPMJG00000014126)
Galloanserae	ANCESTRAL SPECIES		ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
Anatidae	ANCESTRAL SPECIES	3	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
Pink-footed goose	MODERN SPECIES	14								IRX4 (ENSABRG00000003978)	IRX2 (ENSABRG00000003949)	ENSABRG00000003940	IRX1 (ENSABRG00000003932)	ANKS6 (ENSABRG00000003843)	GALNT12 (ENSABRG00000003830)	GABBR2 (ENSABRG00000003631)	ELP2 (ENSABRG00000003540)	CTNNAL1 (ENSABRG00000003522) #22	ABITRAM (ENSABRG00000003497) #23	SLC39A6 (ENSABRG00000003471)	ENSABRG00000003452	TMEFF1 (ENSABRG00000003407)	CAVIN4 (ENSABRG00000003396)	ENSABRG00000000760	EXOC3 (ENSABRG00000000679)	ENSABRG00000019258	PDCD6 (ENSABRG00000019255)	ENSABRG00000019250	AHRR (ENSABRG00000019246)	MSANTD3 (ENSABRG00000019244)	ENSABRG00000019238	TEX10 (ENSABRG00000019236)	INVS (ENSABRG00000019235)
Duck	MODERN SPECIES	10	SLC6A19 (ENSAPLG00000005930)	SLC6A18 (ENSAPLG00000023971)	TERT (ENSAPLG00000004975)	CLPTM1L (ENSAPLG00000004129)	LPCAT1 (ENSAPLG00000003565)	MRPL36 (ENSAPLG00000028760)	NDUFS6 (ENSAPLG00000024272)	IRX4 (ENSAPLG00000022847)	IRX2 (ENSAPLG00000024367)	IRX1 (ENSAPLG00000021490)	ANKS6 (ENSAPLG00000014196)	GALNT12 (ENSAPLG00000012197)	ENSAPLG00000025947	GABBR2 (ENSAPLG00000008633)	ELP2 (ENSAPLG00000008710)	CTNNAL1 (ENSAPLG00000008830) #22	ABITRAM (ENSAPLG00000027536) #23	SLC39A6 (ENSAPLG00000009318)	TMEFF1 (ENSAPLG00000009426)	ENSAPLG00000019691	CAVIN4 (ENSAPLG00000009681)	ENSAPLG00000009683	EXOC3 (ENSAPLG00000010055)	PDCD6 (ENSAPLG00000013444)	ENSAPLG00000018399	AHRR (ENSAPLG00000013653)	MSANTD3 (ENSAPLG00000013833)	ENSAPLG00000013907	TEX10 (ENSAPLG00000014122)	INVS (ENSAPLG00000011911)	ERP44 (ENSAPLG00000011639)
Phasianidae	DUPLICATION
Phasianidae	ANCESTRAL SPECIES																	ENSGT01030000234543.F.g #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT01030000234543.F.g #22
Turkey	MODERN SPECIES	22	ENSMGAG00000007615	ENSMGAG00000022389	ENSMGAG00000007604	ENSMGAG00000019154	ENSMGAG00000007591	ENSMGAG00000007544	ENSMGAG00000007570	ENSMGAG00000018304	ENSMGAG00000007538	ENSMGAG00000007419	ENSMGAG00000019521	ENSMGAG00000022048	ENSMGAG00000007394	ENSMGAG00000007353 #22	ENSMGAG00000007371 #23	ENSMGAG00000019127 #22	ENSMGAG00000007303	ENSMGAG00000016816	ENSMGAG00000021014	ENSMGAG00000007244	ENSMGAG00000007222	ENSMGAG00000021412	ENSMGAG00000021513	ENSMGAG00000008114	ENSMGAG00000008109	ENSMGAG00000018360	ENSMGAG00000008045	ENSMGAG00000008029	ENSMGAG00000018380	ENSMGAG00000008020	C6orf62 (ENSMGAG00000007993)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F.h #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b
Japanese quail	MODERN SPECIES	11	BMPER (ENSCJPG00005006895)	BBS9 (ENSCJPG00005006907)	NT5C3A (ENSCJPG00005006909)	FKBP9 (ENSCJPG00005006910)	ENSCJPG00005006911	ENSCJPG00005006912	KBTBD2 (ENSCJPG00005006913)	AVL9 (ENSCJPG00005006914)	LSM5 (ENSCJPG00005006916)	PDE1C (ENSCJPG00005006935)	PPP1R17 (ENSCJPG00005006944)	ITPRID1 (ENSCJPG00005006948)	NEUROD6 (ENSCJPG00005006949)	ENSCJPG00005006967	ELP2 (ENSCJPG00005006969)	CTNNAL1 (ENSCJPG00005006980) #22	ABITRAM (ENSCJPG00005006981) #23	SLC39A6 (ENSCJPG00005006983)	TMEFF1 (ENSCJPG00005006985)	CAVIN4 (ENSCJPG00005006986)	ENSCJPG00005006992	EXOC3 (ENSCJPG00005007037)	PDCD6 (ENSCJPG00005007040)	ENSCJPG00005007044	AHRR (ENSCJPG00005007045)	MSANTD3 (ENSCJPG00005007057)	ENSCJPG00005007058	TEX10 (ENSCJPG00005007059)	INVS (ENSCJPG00005007060)	ERP44 (ENSCJPG00005007061)	STX17 (ENSCJPG00005007062)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00390000008818	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F.h #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714.a	ENSGT00950000182910.a.b	ENSGT00940000160714.b	ENSGT00940000164265.C	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031
Turkey	MODERN SPECIES	22	ENSMGAG00000007691	ENSMGAG00000007645	ENSMGAG00000007615	ENSMGAG00000022389	ENSMGAG00000007604	ENSMGAG00000019154	ENSMGAG00000007591	ENSMGAG00000007544	ENSMGAG00000007570	ENSMGAG00000018304	ENSMGAG00000007538	ENSMGAG00000007419	ENSMGAG00000019521	ENSMGAG00000022048	ENSMGAG00000007394	ENSMGAG00000007353 #22	ENSMGAG00000007371 #23	ENSMGAG00000019127 #22	ENSMGAG00000007303	ENSMGAG00000016816	ENSMGAG00000021014	ENSMGAG00000007244	ENSMGAG00000007222	ENSMGAG00000021412	ENSMGAG00000021513	ENSMGAG00000008114	ENSMGAG00000008109	ENSMGAG00000018360	ENSMGAG00000008045	ENSMGAG00000008029	ENSMGAG00000018380
Chicken	MODERN SPECIES	11	SLC6A19 (ENSGALG00010009209)	SLC6A18 (ENSGALG00010008090)	TERT (ENSGALG00010008150)	CLPTM1L (ENSGALG00010008158)	LPCAT1 (ENSGALG00010007581)	MRPL36 (ENSGALG00010007542)	NDUFS6 (ENSGALG00010007555)	IRX4 (ENSGALG00010007564)	ENSGALG00010007574	IRX2 (ENSGALG00010007907)	IRX1 (ENSGALG00010007908)	ANKS6 (ENSGALG00010007910)	GALNT12 (ENSGALG00010007513)	GABBR2 (ENSGALG00010007536)	ELP2 (ENSGALG00010007584)	CTNNAL1 (ENSGALG00010007651) #22	FAM206A (ENSGALG00010007671) #23	SLC39A6 (ENSGALG00010007699)	TMEFF1 (ENSGALG00010008161)	CAVIN4 (ENSGALG00010008168)	ENSGALG00010008175	EXOC3 (ENSGALG00010008189)	PDCD6 (ENSGALG00010008196)	ENSGALG00010008223	AHRR (ENSGALG00010008251)	C2H9ORF30 (ENSGALG00010008255)	ENSGALG00010008298	TEX10 (ENSGALG00010008303)	INVS (ENSGALG00010008314)	ERP44 (ENSGALG00010008319)	STX17 (ENSGALG00010008334)
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00940000154766.a.a	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c	ENSGT00500000044852.a	ENSGT00390000004886	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b
tuatara	MODERN SPECIES	894									ENSSPUG00000014070	ENSSPUG00000014051	ANKS6 (ENSSPUG00000014025)	GALNT12 (ENSSPUG00000014002)	ENSSPUG00000013995	GABBR2 (ENSSPUG00000013983)	ELP2 (ENSSPUG00000013862)	CTNNAL1 (ENSSPUG00000013783) #22	ABITRAM (ENSSPUG00000013764) #23	SLC39A6 (ENSSPUG00000013752)	TMEFF1 (ENSSPUG00000013683)	CAVIN4 (ENSSPUG00000013663)
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000154766.a.a	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c	ENSGT00500000044852.a	ENSGT00390000004886	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429
Laterata	ANCESTRAL SPECIES	5	ENSGT00390000009802.a	ENSGT00940000154766.a.a	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c	ENSGT00500000044852.a	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	95																ENSPMRG00000022190 #22	ENSPMRG00000022198 #23
Common wall lizard	MODERN SPECIES	15	ENSPMRG00000010602	DAP (ENSPMRG00000010609)	ENSPMRG00000010613	ENSPMRG00000010621	ENSPMRG00000010633	ROPN1L (ENSPMRG00000010645)	MARCHF6 (ENSPMRG00000010662)	ENSPMRG00000010684	ENSPMRG00000010688	NFX1 (ENSPMRG00000010727)	ANKS6 (ENSPMRG00000010999)	GALNT12 (ENSPMRG00000011015)	GABBR2 (ENSPMRG00000011028)	ENSPMRG00000011039	ENSPMRG00000011048	ENSPMRG00000011100 #22	ENSPMRG00000011193 #23	SLC39A6 (ENSPMRG00000011196)	TMEFF1 (ENSPMRG00000011202)	SLC12A7 (ENSPMRG00000011211)	CAVIN4 (ENSPMRG00000011235)	SLC6A19 (ENSPMRG00000011268)	ENSPMRG00000011377	ENSPMRG00000011409	ENSPMRG00000011548	TERT (ENSPMRG00000011747)	CLPTM1L (ENSPMRG00000011767)	LPCAT1 (ENSPMRG00000011784)	ENSPMRG00000011792	NDUFS6 (ENSPMRG00000011794)	ENSPMRG00000011796
Argentine black and white tegu	MODERN SPECIES	36	ENSSMRG00000015137	CTNND2 (ENSSMRG00000015141)	DAP (ENSSMRG00000015144)	ENSSMRG00000015145	ENSSMRG00000015146	ROPN1L (ENSSMRG00000015147)	MARCHF6 (ENSSMRG00000015148)	ENSSMRG00000015149	ENSSMRG00000015150	NFX1 (ENSSMRG00000015151)	ANKS6 (ENSSMRG00000015157)	GALNT12 (ENSSMRG00000015160)	GABBR2 (ENSSMRG00000015161)	ENSSMRG00000015163	ELP2 (ENSSMRG00000015164)	CTNNAL1 (ENSSMRG00000015165) #22	ABITRAM (ENSSMRG00000015167) #23	SLC39A6 (ENSSMRG00000015168)	TMEFF1 (ENSSMRG00000015171)	CAVIN4 (ENSSMRG00000015173)	SLC12A7 (ENSSMRG00000015175)	ENSSMRG00000015179	SLC6A19 (ENSSMRG00000015180)	SLC6A18 (ENSSMRG00000015183)	TERT (ENSSMRG00000015501)	CLPTM1L (ENSSMRG00000015502)	LPCAT1 (ENSSMRG00000015505)	ENSSMRG00000015507	ENSSMRG00000015508	IRX4 (ENSSMRG00000015509)	IRX2 (ENSSMRG00000015513)
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000154766.a.a	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c	ENSGT00500000044852.a	ENSGT00390000004886	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429
Lizard	DUPLICATION
Lizard	MODERN SPECIES	3	ANKRD33B (ENSACAG00000042057)	ENSACAG00000002811	ROPN1L (ENSACAG00000002810)	MARCHF6 (ENSACAG00000002675)	ENSACAG00000039612	ENSACAG00000040955	ENSACAG00000002671	ENSACAG00000002412	ENSACAG00000002349	ENSACAG00000002302	ENSACAG00000002199	ENSACAG00000040991	ENSACAG00000002071	ENSACAG00000043423	ENSACAG00000039987 #22	ENSACAG00000001940 #22	ENSACAG00000001852	ENSACAG00000039380	ENSACAG00000001796	ENSACAG00000042655	SLC12A7 (ENSACAG00000002218)	SLC6A19 (ENSACAG00000001587)	SLC6A18 (ENSACAG00000040166)	ENSACAG00000042115	TERT (ENSACAG00000001261)	ENSACAG00000038843	CLPTM1L (ENSACAG00000000974)	ENSACAG00000036824	ENSACAG00000042233	LPCAT1 (ENSACAG00000000821)	MRPL36 (ENSACAG00000000820)
Lizard	MODERN SPECIES	3	DAP (ENSACAG00000024923)	ANKRD33B (ENSACAG00000042057)	ENSACAG00000002811	ROPN1L (ENSACAG00000002810)	MARCHF6 (ENSACAG00000002675)	ENSACAG00000039612	ENSACAG00000040955	ENSACAG00000002671	ENSACAG00000002412	ENSACAG00000002349	ENSACAG00000002302	ENSACAG00000002199	ENSACAG00000040991	ENSACAG00000002071	ENSACAG00000043423	ENSACAG00000039987 #22	ENSACAG00000001940 #22	ENSACAG00000001852	ENSACAG00000039380	ENSACAG00000001796	ENSACAG00000042655	SLC12A7 (ENSACAG00000002218)	SLC6A19 (ENSACAG00000001587)	SLC6A18 (ENSACAG00000040166)	ENSACAG00000042115	TERT (ENSACAG00000001261)	ENSACAG00000038843	CLPTM1L (ENSACAG00000000974)	ENSACAG00000036824	ENSACAG00000042233	LPCAT1 (ENSACAG00000000821)
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000154766.a.a	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c	ENSGT00500000044852.a	ENSGT00390000004886	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429
Indian cobra	MODERN SPECIES	2	DNAH5 (ENSNNAG00000002255)	CTNND2 (ENSNNAG00000001906)	DAP (ENSNNAG00000001852)	ANKRD33B (ENSNNAG00000001844)	SNRNP48 (ENSNNAG00000001823)	ROPN1L (ENSNNAG00000001800)	MARCHF6 (ENSNNAG00000001667)	ENSNNAG00000001600	ENSNNAG00000001585	ENSNNAG00000001560	ENSNNAG00000001535	ANKS6 (ENSNNAG00000001492)	GALNT12 (ENSNNAG00000001470)	GABBR2 (ENSNNAG00000001441)	ELP2 (ENSNNAG00000001397)	CTNNAL1 (ENSNNAG00000001299) #22	ABITRAM (ENSNNAG00000001260) #23	SLC39A6 (ENSNNAG00000001244)	TMEFF1 (ENSNNAG00000001223)	CAVIN4 (ENSNNAG00000001218)	SLC12A7 (ENSNNAG00000001119)	SLC6A19 (ENSNNAG00000001042)	SLC6A18 (ENSNNAG00000000999)	TERT (ENSNNAG00000000941)	CLPTM1L (ENSNNAG00000000922)	LPCAT1 (ENSNNAG00000000898)	ENSNNAG00000000889	NDUFS6 (ENSNNAG00000000877)	IRX4 (ENSNNAG00000000859)	IRX2 (ENSNNAG00000000840)	IRX1 (ENSNNAG00000000813)
Elapidae_a	ANCESTRAL SPECIES	35	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c	ENSGT00500000044852.a	ENSGT00390000004886	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01000000215895	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387.i	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429
Blue-lipped sea krait	MODERN SPECIES	7184																CTNNAL1 (ENSLLTG00000010083) #22	ABITRAM (ENSLLTG00000010247) #23	ENSLLTG00000010259
Acanthophiinae	ANCESTRAL SPECIES	35	ENSGT00940000155533.d	ENSGT00940000154952.a.b	ENSGT00940000154574.c.i	ENSGT00500000044852.a	ENSGT00390000004886	ENSGT00390000012731.a.a	ENSGT00940000155171.a.b	ENSGT00390000000183.g.b	ENSGT00390000000183.g.a	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01000000215895	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387.i	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531	ENSGT00530000063461.A	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00940000160429
Mainland tiger snake	MODERN SPECIES	45													GABBR2 (ENSNSUG00000010025)	ELP2 (ENSNSUG00000010026)	ENSNSUG00000010028	ENSNSUG00000010030 #22	ABITRAM (ENSNSUG00000010032) #23	SLC39A6 (ENSNSUG00000010034)	TMEFF1 (ENSNSUG00000010036)	CAVIN4 (ENSNSUG00000010038)	SLC12A7 (ENSNSUG00000010041)	SLC6A19 (ENSNSUG00000010044)	TERT (ENSNSUG00000010047)	CLPTM1L (ENSNSUG00000010147)	LPCAT1 (ENSNSUG00000010206)	ENSNSUG00000010207	ENSNSUG00000010208	IRX4 (ENSNSUG00000010212)	IRX2 (ENSNSUG00000010220)	IRX1 (ENSNSUG00000010225)	ADAMTS16 (ENSNSUG00000010227)
Eastern brown snake	MODERN SPECIES	15	DNAH5 (ENSPTXG00000013268)	CTNND2 (ENSPTXG00000013231)	DAP (ENSPTXG00000013228)	ANKRD33B (ENSPTXG00000013224)	SNRNP48 (ENSPTXG00000013222)	ROPN1L (ENSPTXG00000013221)	MARCHF6 (ENSPTXG00000013220)	ENSPTXG00000013219	ENSPTXG00000013218	NFX1 (ENSPTXG00000004148)	ANKS6 (ENSPTXG00000004146)	GALNT12 (ENSPTXG00000004143)	GABBR2 (ENSPTXG00000004142)	ELP2 (ENSPTXG00000004141)	ENSPTXG00000004140	CTNNAL1 (ENSPTXG00000004139) #22	ABITRAM (ENSPTXG00000004137) #23	SLC39A6 (ENSPTXG00000004136)	TMEFF1 (ENSPTXG00000004135)	CAVIN4 (ENSPTXG00000004134)	SLC12A7 (ENSPTXG00000004132)	SLC6A19 (ENSPTXG00000004129)	ENSPTXG00000004128	TERT (ENSPTXG00000004127)	ENSPTXG00000004126	CLPTM1L (ENSPTXG00000004125)	LPCAT1 (ENSPTXG00000004123)	ENSPTXG00000004122	NDUFS6 (ENSPTXG00000004121)	IRX4 (ENSPTXG00000004120)	IRX2 (ENSPTXG00000004119)
Anura	ANCESTRAL SPECIES	1	ENSGT00940000160746	ENSGT00390000018047	ENSGT00940000160025	ENSGT00940000158009	ENSGT00390000012189	ENSGT00390000009802.b	ENSGT00390000009802.a	ENSGT00940000161224	ENSGT01030000234574.A.a	ENSGT00950000182886.b.b	ENSGT00940000153665.a	ENSGT00940000161612	ENSGT00390000014501	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F #22	ENSGT00450000040303 #23	ENSGT00940000156387.a	ENSGT00940000160714	ENSGT00950000182910.a.b
Leishan spiny toad	MODERN SPECIES	8	OTULINL (ENSLLEG00000021682)	SLC6A3 (ENSLLEG00000021446)	LPCAT1 (ENSLLEG00000021217)	ENSLLEG00000021185	SRD5A1 (ENSLLEG00000021076)	NSUN2 (ENSLLEG00000020504)	UBE2QL1 (ENSLLEG00000020432)	MED10 (ENSLLEG00000020340)	ENSLLEG00000020312	ENSLLEG00000020259	ENSLLEG00000020200	GABBR2 (ENSLLEG00000019673)	ELP2 (ENSLLEG00000018935)	ENSLLEG00000018812	ENSLLEG00000018765	CTNNAL1 (ENSLLEG00000018095) #22	ABITRAM (ENSLLEG00000018011) #23	SLC39A6 (ENSLLEG00000017720)	ENSLLEG00000017694	ENSLLEG00000017658	TMEFF1 (ENSLLEG00000017549)	CAVIN4 (ENSLLEG00000017484)	ENSLLEG00000017454	ENSLLEG00000016618	ENSLLEG00000016574	NFX1 (ENSLLEG00000015444)	ENSLLEG00000015351	ENSLLEG00000015286	CHMP5 (ENSLLEG00000015034)	BAG1 (ENSLLEG00000014809)	ENSLLEG00000014780
Frog	MODERN SPECIES	6	ENSXETG00000045086	ENSXETG00000042490	lpcat1 (ENSXETG00000001729)	srd5a1 (ENSXETG00000001731)	nsun2 (ENSXETG00000001732)	ube2ql1 (ENSXETG00000001734)	med10 (ENSXETG00000026404)	ENSXETG00000048905	ENSXETG00000046385	gabbr2 (ENSXETG00000018917)	elp2 (ENSXETG00000018920)	ENSXETG00000042006	ENSXETG00000046515	ENSXETG00000047228	ENSXETG00000045172	ctnnal1 (ENSXETG00000018934) #22	abitram (ENSXETG00000027667) #23	ENSXETG00000014976	ENSXETG00000044645	ENSXETG00000042981	tmeff1 (ENSXETG00000027666)	dnah8 (ENSXETG00000014981)	ENSXETG00000042876	nfx1 (ENSXETG00000014997)	ENSXETG00000047169	ENSXETG00000044420	epb41l4b (ENSXETG00000034898) #19	ENSXETG00000043957	ptpn3 (ENSXETG00000003648) #16	ENSXETG00000049356	ENSXETG00000045885