Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Primates	ANCESTRAL SPECIES	24	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000011417.k.b #23	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36
Gibbon	MODERN SPECIES	19	RMC1 (ENSNLEG00000006736) #7	NPC1 (ENSNLEG00000006732) #8	ANKRD29 (ENSNLEG00000006727) #9	LAMA3 (ENSNLEG00000006636) #10	ENSNLEG00000029850 #11	TTC39C (ENSNLEG00000006631) #12	ENSNLEG00000006627 #13	ENSNLEG00000006588 #14	IMPACT (ENSNLEG00000006582) #15	ENSNLEG00000006579 #16	ENSNLEG00000034303 #17	ZNF521 (ENSNLEG00000006568) #18	SS18 (ENSNLEG00000006558) #19	PSMA8 (ENSNLEG00000006555) #20	ENSNLEG00000006553 #21	TAF4B (ENSNLEG00000006545) #22	ENSNLEG00000031533 #23	KCTD1 (ENSNLEG00000006544) #24	ENSNLEG00000028506 #25	AQP4 (ENSNLEG00000006540) #26	CHST9 (ENSNLEG00000006536) #27	ENSNLEG00000028428 #28	CDH2 (ENSNLEG00000006531) #29	ENSNLEG00000030976 #30	DSC3 (ENSNLEG00000006518) #31	DSC2 (ENSNLEG00000026724) #32	DSC1 (ENSNLEG00000006503) #33	DSG1 (ENSNLEG00000006497) #34	DSG4 (ENSNLEG00000006477) #35	DSG3 (ENSNLEG00000006471) #36	DSG2 (ENSNLEG00000006455) #37
Hominidae	ANCESTRAL SPECIES	24	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000011417.k.b #23	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000011417.k.b #23	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b
Gorilla	MODERN SPECIES	9	ENSGGOG00000003409	ENSGGOG00000036734	RMC1 (ENSGGOG00000005106) #7	NPC1 (ENSGGOG00000005117) #8	ANKRD29 (ENSGGOG00000005123) #9	ENSGGOG00000024583	LAMA3 (ENSGGOG00000006722) #10	TTC39C (ENSGGOG00000003945) #12	ENSGGOG00000006062 #13	OSBPL1A (ENSGGOG00000006066) #14	ENSGGOG00000042431	HRH4 (ENSGGOG00000005579) #16	ZNF521 (ENSGGOG00000027325) #18	SS18 (ENSGGOG00000004461) #19	PSMA8 (ENSGGOG00000016377) #20	TAF4B (ENSGGOG00000003977) #22	ENSGGOG00000040020 #21	ENSGGOG00000013560 #24	ENSGGOG00000038362	CIAPIN1 (ENSGGOG00000022607) #23	ENSGGOG00000023856 #25	AQP4 (ENSGGOG00000010474) #26	CHST9 (ENSGGOG00000025951) #27	CDH2 (ENSGGOG00000012100) #29	DSC3 (ENSGGOG00000003206) #31	DSC2 (ENSGGOG00000006133) #32	DSC1 (ENSGGOG00000013528) #33	DSG1 (ENSGGOG00000000138) #34	DSG4 (ENSGGOG00000012707) #35	DSG3 (ENSGGOG00000001155) #36	DSG2 (ENSGGOG00000008855) #37
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000011417.k.b #23	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b
Human	MODERN SPECIES	9	CABLES1 (ENSG00000134508)	TMEM241 (ENSG00000134490)	RIOK3 (ENSG00000101782)	RMC1 (ENSG00000141452) #7	NPC1 (ENSG00000141458) #8	ANKRD29 (ENSG00000154065) #9	LAMA3 (ENSG00000053747) #10	TTC39C (ENSG00000168234) #12	CABYR (ENSG00000154040) #13	OSBPL1A (ENSG00000141447) #14	IMPACT (ENSG00000154059) #15	HRH4 (ENSG00000134489) #16	ZNF521 (ENSG00000198795) #18	SS18 (ENSG00000141380) #19	PSMA8 (ENSG00000154611) #20	TAF4B (ENSG00000141384) #22	KCTD1 (ENSG00000134504) #24	AQP4 (ENSG00000171885) #26	CHST9 (ENSG00000154080) #27	CDH2 (ENSG00000170558) #29	DSC3 (ENSG00000134762) #31	DSC2 (ENSG00000134755) #32	DSC1 (ENSG00000134765) #33	DSG1 (ENSG00000134760) #34	DSG4 (ENSG00000175065) #35	DSG3 (ENSG00000134757) #36	DSG2 (ENSG00000046604) #37	TTR (ENSG00000118271)	B4GALT6 (ENSG00000118276)	SLC25A52 (ENSG00000141437)	TRAPPC8 (ENSG00000153339)
Pan	ANCESTRAL SPECIES	24	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000011417.k.b #23	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00910000148296	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36
Bonobo	MODERN SPECIES	9	TMEM241 (ENSPPAG00000029062)	RIOK3 (ENSPPAG00000030258)	RMC1 (ENSPPAG00000033058) #7	NPC1 (ENSPPAG00000017628) #8	ANKRD29 (ENSPPAG00000031520) #9	LAMA3 (ENSPPAG00000014480) #10	TTC39C (ENSPPAG00000024662) #12	ENSPPAG00000038669 #13	OSBPL1A (ENSPPAG00000028012) #14	IMPACT (ENSPPAG00000032808) #15	HRH4 (ENSPPAG00000038829) #16	ENSPPAG00000040491	ZNF521 (ENSPPAG00000032100) #18	SS18 (ENSPPAG00000037543) #19	PSMA8 (ENSPPAG00000027989) #20	TAF4B (ENSPPAG00000033308) #22	ENSPPAG00000034206 #21	ENSPPAG00000036748 #24	ENSPPAG00000028147	ENSPPAG00000029862 #23	ENSPPAG00000030931 #25	AQP4 (ENSPPAG00000031870) #26	CHST9 (ENSPPAG00000030236) #27	ENSPPAG00000032172 #28	ENSPPAG00000023873	CDH2 (ENSPPAG00000037338) #29	DSC3 (ENSPPAG00000041022) #31	DSC2 (ENSPPAG00000036483) #32	DSC1 (ENSPPAG00000036726) #33	DSG1 (ENSPPAG00000041927) #34	DSG4 (ENSPPAG00000041024) #35
Chimpanzee	MODERN SPECIES	9	CABLES1 (ENSPTRG00000009916)	TMEM241 (ENSPTRG00000009917)	RIOK3 (ENSPTRG00000009918)	RMC1 (ENSPTRG00000009919) #7	NPC1 (ENSPTRG00000009920) #8	ANKRD29 (ENSPTRG00000009921) #9	LAMA3 (ENSPTRG00000009922) #10	TTC39C (ENSPTRG00000009923) #12	CABYR (ENSPTRG00000009925) #13	OSBPL1A (ENSPTRG00000009926) #14	IMPACT (ENSPTRG00000009927) #15	HRH4 (ENSPTRG00000009928) #16	ZNF521 (ENSPTRG00000022783) #18	SS18 (ENSPTRG00000009931) #19	PSMA8 (ENSPTRG00000009933) #20	TAF4B (ENSPTRG00000009934) #22	ENSPTRG00000052077 #21	KCTD1 (ENSPTRG00000009935) #24	ENSPTRG00000046641	ENSPTRG00000041531 #23	ENSPTRG00000040512 #25	AQP4 (ENSPTRG00000009936) #26	CHST9 (ENSPTRG00000009938) #27	ENSPTRG00000049096 #28	ENSPTRG00000048916	CDH2 (ENSPTRG00000009939) #29	DSC3 (ENSPTRG00000009940) #31	DSC2 (ENSPTRG00000009941) #32	DSC1 (ENSPTRG00000009943) #33	DSG1 (ENSPTRG00000009945) #34	DSG4 (ENSPTRG00000009946) #35
Orangutan	MODERN SPECIES	9	RBBP8 (ENSPPYG00000009059)	CABLES1 (ENSPPYG00000009060)	TMEM241 (ENSPPYG00000009061)	RIOK3 (ENSPPYG00000009062)	RMC1 (ENSPPYG00000009063) #7	NPC1 (ENSPPYG00000009064) #8	ANKRD29 (ENSPPYG00000009065) #9	LAMA3 (ENSPPYG00000029871) #10	TTC39C (ENSPPYG00000009066) #12	ENSPPYG00000009069 #13	DKFZP469O0726 (ENSPPYG00000009070) #14	ENSPPYG00000009072 #16	ZNF521 (ENSPPYG00000009074) #18	SS18 (ENSPPYG00000009075) #19	PSMA8 (ENSPPYG00000009076) #20	TAF4B (ENSPPYG00000009077) #22	KCTD1 (ENSPPYG00000009078) #24	ENSPPYG00000038429 #23	ENSPPYG00000035338 #25	AQP4 (ENSPPYG00000037974) #26	CHST9 (ENSPPYG00000009080) #27	CDH2 (ENSPPYG00000009082) #29	DSC3 (ENSPPYG00000009083) #31	DSC2 (ENSPPYG00000009084) #32	DSC1 (ENSPPYG00000009085) #33	DSG1 (ENSPPYG00000009086) #34	DSG4 (ENSPPYG00000009087) #35	DSG3 (ENSPPYG00000009088) #36	DSG2 (ENSPPYG00000009089) #37	TTR (ENSPPYG00000038498)	B4GALT6 (ENSPPYG00000009091)
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571.k #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571.k #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37
Macaca	ANCESTRAL SPECIES	22	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571.k #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571.k #15	ENSGT00940000162118 #16	ENSGT01090000260213.a.b.a	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.b.b.a.b	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00940000155622.e.b.b	ENSGT00390000000568
Rhesus	MODERN SPECIES	9	ANKRD29 (ENSMMUG00000020328) #9	NPC1 (ENSMMUG00000021484) #8	LAMA3 (ENSMMUG00000004321) #10	TTC39C (ENSMMUG00000004343) #12	CABYR (ENSMMUG00000004346) #13	OSBPL1A (ENSMMUG00000004350) #14	ENSMMUG00000060481	IMPACT (ENSMMUG00000004664) #15	HRH4 (ENSMMUG00000015065) #16	ENSMMUG00000063433	ZNF521 (ENSMMUG00000008600) #18	ENSMMUG00000057585	SS18 (ENSMMUG00000018059) #19	PSMA8 (ENSMMUG00000018066) #20	ENSMMUG00000050048	TAF4B (ENSMMUG00000016190) #22	KCTD1 (ENSMMUG00000004595) #24	AQP4 (ENSMMUG00000014934) #26	ENSMMUG00000063880	ENSMMUG00000050507	CHST9 (ENSMMUG00000011801) #27	ENSMMUG00000039405	CDH2 (ENSMMUG00000015178) #29	DSC3 (ENSMMUG00000007668) #31	DSC2 (ENSMMUG00000011687) #32	DSC1 (ENSMMUG00000011690) #33	DSG1 (ENSMMUG00000022703) #34	DSG4 (ENSMMUG00000022704) #35	DSG3 (ENSMMUG00000021094) #36	DSG2 (ENSMMUG00000021095) #37	TTR (ENSMMUG00000052277)
Crab-eating macaque	MODERN SPECIES	9	ANKRD29 (ENSMFAG00000032971) #9	LAMA3 (ENSMFAG00000045256) #10	TTC39C (ENSMFAG00000023934) #12	ENSMFAG00000007440 #13	ENSMFAG00000047510	OSBPL1A (ENSMFAG00000003468) #14	ENSMFAG00000052772 #15	ENSMFAG00000057815	ENSMFAG00000060888	HRH4 (ENSMFAG00000050624) #16	ENSMFAG00000048831	ZNF521 (ENSMFAG00000044636) #18	SS18 (ENSMFAG00000035986) #19	PSMA8 (ENSMFAG00000011562) #20	ENSMFAG00000050615	TAF4B (ENSMFAG00000031932) #22	ENSMFAG00000036987 #24	ENSMFAG00000050383	ENSMFAG00000052328	AQP4 (ENSMFAG00000041146) #26	ENSMFAG00000056073	CHST9 (ENSMFAG00000037917) #27	CDH2 (ENSMFAG00000004661) #29	ENSMFAG00000033666	DSC2 (ENSMFAG00000045076) #32	DSC1 (ENSMFAG00000035735) #33	ENSMFAG00000059757	DSG1 (ENSMFAG00000033359) #34	DSG4 (ENSMFAG00000031939) #35	DSG3 (ENSMFAG00000031707) #36	DSG2 (ENSMFAG00000014923) #37
Pig-tailed macaque	MODERN SPECIES	88	CABLES1 (ENSMNEG00000028707)	TMEM241 (ENSMNEG00000002543)	RIOK3 (ENSMNEG00000041106)	RMC1 (ENSMNEG00000040499) #7	NPC1 (ENSMNEG00000000903) #8	ANKRD29 (ENSMNEG00000042612) #9	LAMA3 (ENSMNEG00000038755) #10	TTC39C (ENSMNEG00000021471) #12	ENSMNEG00000034958 #13	OSBPL1A (ENSMNEG00000043616) #14	ENSMNEG00000045101 #15	HRH4 (ENSMNEG00000038364) #16	ZNF521 (ENSMNEG00000024580) #18	SS18 (ENSMNEG00000035248) #19	PSMA8 (ENSMNEG00000029712) #20	TAF4B (ENSMNEG00000030401) #22	KCTD1 (ENSMNEG00000031582) #24	ENSMNEG00000034649	ENSMNEG00000031060 #25	AQP4 (ENSMNEG00000029824) #26	CHST9 (ENSMNEG00000028230) #27	CDH2 (ENSMNEG00000043364) #29
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571.k #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37
Olive baboon	MODERN SPECIES	10	CABLES1 (ENSPANG00000009181)	TMEM241 (ENSPANG00000023661)	RIOK3 (ENSPANG00000011485)	RMC1 (ENSPANG00000016020) #7	NPC1 (ENSPANG00000010539) #8	ANKRD29 (ENSPANG00000005578) #9	LAMA3 (ENSPANG00000006011) #10	TTC39C (ENSPANG00000022865) #12	ENSPANG00000007685 #13	OSBPL1A (ENSPANG00000006624) #14	IMPACT (ENSPANG00000008356) #15	HRH4 (ENSPANG00000012665) #16	ZNF521 (ENSPANG00000024017) #18	SS18 (ENSPANG00000008559) #19	PSMA8 (ENSPANG00000015004) #20	TAF4B (ENSPANG00000008355) #22	KCTD1 (ENSPANG00000024016) #24	CHST9 (ENSPANG00000020899) #27	ENSPANG00000039105	CDH2 (ENSPANG00000017231) #29	ENSPANG00000049833	DSC2 (ENSPANG00000009805) #32	DSC1 (ENSPANG00000009488) #33	DSG1 (ENSPANG00000016945) #34	DSG4 (ENSPANG00000005935) #35	DSG3 (ENSPANG00000010061) #36	DSG2 (ENSPANG00000016509) #37	TTR (ENSPANG00000043902)	B4GALT6 (ENSPANG00000009803)	SLC25A52 (ENSPANG00000047262)	TRAPPC8 (ENSPANG00000007683)
Cercopithecinae_d	ANCESTRAL SPECIES	40	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571.k #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37
Sooty mangabey	MODERN SPECIES	190														ENSCATG00000040236 #19	PSMA8 (ENSCATG00000039661) #20	TAF4B (ENSCATG00000033025) #22	ENSCATG00000032708	KCTD1 (ENSCATG00000033898) #24	ENSCATG00000037357 #25	AQP4 (ENSCATG00000043318) #26	ENSCATG00000042047	CHST9 (ENSCATG00000038090) #27	ENSCATG00000041408 #28	CDH2 (ENSCATG00000023265) #29	ENSCATG00000032024 #30	DSC3 (ENSCATG00000023525) #31	DSC2 (ENSCATG00000030635) #32	DSC1 (ENSCATG00000039095) #33	DSG1 (ENSCATG00000035435) #34	DSG4 (ENSCATG00000034220) #35	DSG3 (ENSCATG00000027372) #36
Drill	MODERN SPECIES	970	TMEM241 (ENSMLEG00000038124)	RIOK3 (ENSMLEG00000028187)	RMC1 (ENSMLEG00000036227) #7	NPC1 (ENSMLEG00000042669) #8	ANKRD29 (ENSMLEG00000038382) #9	LAMA3 (ENSMLEG00000038499) #10	ENSMLEG00000033765 #11	TTC39C (ENSMLEG00000030204) #12	ENSMLEG00000040361 #13	OSBPL1A (ENSMLEG00000043765) #14	IMPACT (ENSMLEG00000033219) #15	HRH4 (ENSMLEG00000030717) #16	ZNF521 (ENSMLEG00000042856) #18	SS18 (ENSMLEG00000043814) #19	PSMA8 (ENSMLEG00000042180) #20	TAF4B (ENSMLEG00000030427) #22	ENSMLEG00000032605	ENSMLEG00000033054 #24	ENSMLEG00000034783 #25	AQP4 (ENSMLEG00000041854) #26
Vervet Monkey	MODERN SPECIES	9	CABLES1 (ENSCSAG00000017675)	TMEM241 (ENSCSAG00000017679)	RIOK3 (ENSCSAG00000017680)	RMC1 (ENSCSAG00000017683) #7	NPC1 (ENSCSAG00000017694) #8	ANKRD29 (ENSCSAG00000017699) #9	LAMA3 (ENSCSAG00000017763) #10	TTC39C (ENSCSAG00000017784) #12	CABYR (ENSCSAG00000017786) #13	OSBPL1A (ENSCSAG00000017790) #14	IMPACT (ENSCSAG00000017798) #15	HRH4 (ENSCSAG00000017801) #16	ZNF521 (ENSCSAG00000017805) #18	SS18 (ENSCSAG00000017808) #19	PSMA8 (ENSCSAG00000017812) #20	TAF4B (ENSCSAG00000017814) #22	KCTD1 (ENSCSAG00000017816) #24	AQP4 (ENSCSAG00000017817) #26	CHST9 (ENSCSAG00000017818) #27	CDH2 (ENSCSAG00000017819) #29	ENSCSAG00000018574	ENSCSAG00000018573	ENSCSAG00000018572	DSC3 (ENSCSAG00000017820) #31	DSC2 (ENSCSAG00000017822) #32	DSC1 (ENSCSAG00000017834) #33	DSG1 (ENSCSAG00000017839) #34	DSG4 (ENSCSAG00000017847) #35	DSG3 (ENSCSAG00000017854) #36	DSG2 (ENSCSAG00000017859) #37	TTR (ENSCSAG00000017862)
Rhinopithecus	ANCESTRAL SPECIES	537														ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a.c.a #24	ENSGT00910000146942	ENSGT00390000002408.c.a.b #25	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28
Black snub-nosed monkey	MODERN SPECIES	2055														SS18 (ENSRBIG00000042147) #19	PSMA8 (ENSRBIG00000010432) #20	TAF4B (ENSRBIG00000029558) #22	ENSRBIG00000027224	ENSRBIG00000038661 #24	ENSRBIG00000030904 #25	AQP4 (ENSRBIG00000028190) #26	CHST9 (ENSRBIG00000012098) #27
Golden snub-nosed monkey	MODERN SPECIES	2237														SS18 (ENSRROG00000043063) #19	PSMA8 (ENSRROG00000014601) #20	TAF4B (ENSRROG00000030187) #22	ENSRROG00000030521	ENSRROG00000025474 #24	ENSRROG00000034652 #25	AQP4 (ENSRROG00000040234) #26	CHST9 (ENSRROG00000035490) #27	ENSRROG00000014836 #28
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a.c #22	ENSGT00940000156453.a.d ##24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000154281.m.b.a.b.b #28	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT00950000182895.a.a.a.b.f	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b
Cebidae	ANCESTRAL SPECIES	28	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a.c #22	ENSGT00940000156453.a.d ##24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT00950000182895.a.a.a.b.f	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138
Marmoset	MODERN SPECIES	4	RIOK3 (ENSCJAG00000020556)	RMC1 (ENSCJAG00000020571) #7	NPC1 (ENSCJAG00000020581) #8	ANKRD29 (ENSCJAG00000020590) #9	LAMA3 (ENSCJAG00000020598) #10	TTC39C (ENSCJAG00000020629) #12	ENSCJAG00000057247 #11	ENSCJAG00000020641 #13	OSBPL1A (ENSCJAG00000020648) #14	IMPACT (ENSCJAG00000020674) #15	HRH4 (ENSCJAG00000020684) #16	ENSCJAG00000081714	ENSCJAG00000070295	ZNF521 (ENSCJAG00000020691) #18	SS18 (ENSCJAG00000020695) #19	TAF4B (ENSCJAG00000020711) #22	PSMA8 (ENSCJAG00000020707) #20	ENSCJAG00000076993	ENSCJAG00000072314	KCTD1 (ENSCJAG00000020728) #24	ENSCJAG00000080873	ENSCJAG00000073114	AQP4 (ENSCJAG00000020734) #26	CHST9 (ENSCJAG00000020745) #27	ENSCJAG00000081014	ENSCJAG00000082900	CDH2 (ENSCJAG00000020748) #29	ENSCJAG00000082045	ENSCJAG00000058738	ENSCJAG00000057254	DSC2 (ENSCJAG00000020776) #32
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT01000000215939 #11	ENSGT00950000182917.b #12	ENSGT00390000000444.i #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a.c #22	ENSGT00940000156453.a.d ##24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT00940000154875.l #30	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568
Capuchin	MODERN SPECIES	12	RIOK3 (ENSCCAG00000028338)	RMC1 (ENSCCAG00000030450) #7	NPC1 (ENSCCAG00000035662) #8	ANKRD29 (ENSCCAG00000037439) #9	LAMA3 (ENSCCAG00000032219) #10	ENSCCAG00000030839	TTC39C (ENSCCAG00000025379) #12	ENSCCAG00000021797 #13	OSBPL1A (ENSCCAG00000032012) #14	IMPACT (ENSCCAG00000036594) #15	HRH4 (ENSCCAG00000032343) #16	ZNF521 (ENSCCAG00000029899) #18	ENSCCAG00000020450	SS18 (ENSCCAG00000021245) #19	PSMA8 (ENSCCAG00000035292) #20	TAF4B (ENSCCAG00000033480) #22	ENSCCAG00000037563	ENSCCAG00000005936	KCTD1 (ENSCCAG00000033186) #24	ENSCCAG00000018132	AQP4 (ENSCCAG00000021505) #26	ENSCCAG00000018909	CHST9 (ENSCCAG00000020066) #27	CDH2 (ENSCCAG00000021037) #29	ENSCCAG00000035350 #30	ENSCCAG00000037382	ENSCCAG00000021923	ENSCCAG00000028020	ENSCCAG00000031616	DSC3 (ENSCCAG00000037410) #31	DSC2 (ENSCCAG00000034283) #32
Bolivian squirrel monkey	MODERN SPECIES	53	TMEM241 (ENSSBOG00000035556)	RIOK3 (ENSSBOG00000034387)	RMC1 (ENSSBOG00000020943) #7	NPC1 (ENSSBOG00000032420) #8	ANKRD29 (ENSSBOG00000035888) #9	LAMA3 (ENSSBOG00000032398) #10	ENSSBOG00000032927 #11	TTC39C (ENSSBOG00000031876) #12	ENSSBOG00000019153 #13	OSBPL1A (ENSSBOG00000019319) #14	IMPACT (ENSSBOG00000030096) #15	HRH4 (ENSSBOG00000025937) #16	ZNF521 (ENSSBOG00000035381) #18	SS18 (ENSSBOG00000032909) #19	PSMA8 (ENSSBOG00000023058) #20	TAF4B (ENSSBOG00000023747) #22	ENSSBOG00000028034	ENSSBOG00000036166 ##24	AQP4 (ENSSBOG00000017318) #26	CHST9 (ENSSBOG00000026159) #27	CDH2 (ENSSBOG00000033079) #29	ENSSBOG00000027935 #30	ENSSBOG00000029309	ENSSBOG00000027185	DSC2 (ENSSBOG00000010604) #32	DSG1 (ENSSBOG00000028425) #34	DSG3 (ENSSBOG00000026324) #36	DSG2 (ENSSBOG00000028345) #37	TTR (ENSSBOG00000031047)	B4GALT6 (ENSSBOG00000034735)	TRAPPC8 (ENSSBOG00000022914)
Mas night monkey	MODERN SPECIES	424															PSMA8 (ENSANAG00000021002) #20	ENSANAG00000031500 #22	ENSANAG00000033025	ENSANAG00000032744 #24	ENSANAG00000023037	AQP4 (ENSANAG00000036347) #26	CHST9 (ENSANAG00000033005) #27	ENSANAG00000021369 #28	CDH2 (ENSANAG00000020532) #29	ENSANAG00000024602 #30	ENSANAG00000034505	ENSANAG00000023813	DSC3 (ENSANAG00000025296) #31	DSC2 (ENSANAG00000036335) #32	DSC1 (ENSANAG00000002010) #33	DSG1 (ENSANAG00000018126) #34	DSG4 (ENSANAG00000029653) #35
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000011620.a.a.a.d #22
Mas night monkey	MODERN SPECIES	902	CBY2 (ENSANAG00000028568)	SIAH3 (ENSANAG00000027513)	ZC3H13 (ENSANAG00000033079)	CPB2 (ENSANAG00000024089)	LCP1 (ENSANAG00000028550)	LRRC63 (ENSANAG00000029208)	RUBCNL (ENSANAG00000025520)	ENSANAG00000021038	LRCH1 (ENSANAG00000032605)	ENSANAG00000033549	HTR2A (ENSANAG00000032310)	ENSANAG00000029501	ENSANAG00000028654	ENSANAG00000025311	NUDT15 (ENSANAG00000023666)	ENSANAG00000027167 #22	ENSANAG00000026714	ITM2B (ENSANAG00000029180)	ENSANAG00000011241	LPAR6 (ENSANAG00000016578)	RB1 (ENSANAG00000022056)	ENSANAG00000031593	RCBTB2 (ENSANAG00000023045)	ENSANAG00000013536	CYSLTR2 (ENSANAG00000024658)	FNDC3A (ENSANAG00000029046)	MLNR (ENSANAG00000037292)	CDADC1 (ENSANAG00000024556)	CAB39L (ENSANAG00000024473)
Tarsier	MODERN SPECIES	5852													ENSTSYG00000009189	SS18 (ENSTSYG00000011577) #19	PSMA8 (ENSTSYG00000006548) #20	TAF4B (ENSTSYG00000009936) #22	ENSTSYG00000012694 #24
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354.a #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354.a #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Mouse lemur	MODERN SPECIES	10	ASXL3 (ENSMICG00000031715)	CCDC178 (ENSMICG00000004751)	KLHL14 (ENSMICG00000032905)	GAREM1 (ENSMICG00000013177)	MEP1B (ENSMICG00000044828)	ENSMICG00000043457	ENSMICG00000004459	RNF125 (ENSMICG00000044153)	TRAPPC8 (ENSMICG00000001789)	B4GALT6 (ENSMICG00000007307)	TTR (ENSMICG00000013838)	DSG2 (ENSMICG00000013819) #37	DSG3 (ENSMICG00000033166) #36	DSG4 (ENSMICG00000007825) #35	DSG1 (ENSMICG00000007801) #34	TAF4B (ENSMICG00000007838) #22	KCTD1 (ENSMICG00000002325) #24	ENSMICG00000037615	AQP4 (ENSMICG00000002328) #26	CHST9 (ENSMICG00000042932) #27	ENSMICG00000045056	CDH2 (ENSMICG00000000847) #29	DSC3 (ENSMICG00000004345) #31	DSC2 (ENSMICG00000004351) #32	DSC1 (ENSMICG00000007794) #33	PSMA8 (ENSMICG00000008199) #20	SS18 (ENSMICG00000013326) #19	ZNF521 (ENSMICG00000006267) #18	HRH4 (ENSMICG00000027852) #16	IMPACT (ENSMICG00000031822) #15	OSBPL1A (ENSMICG00000014621) #14
Lemuriformes_a	ANCESTRAL SPECIES	32	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354.a #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Greater bamboo lemur	MODERN SPECIES	161														SS18 (ENSPSMG00000010855) #19	PSMA8 (ENSPSMG00000010897) #20	TAF4B (ENSPSMG00000010953) #22	KCTD1 (ENSPSMG00000010995) #24	AQP4 (ENSPSMG00000011054) #26	CHST9 (ENSPSMG00000011076) #27
Coquerels sifaka	MODERN SPECIES	236									ENSPCOG00000025488	CABYR (ENSPCOG00000023455) #13	OSBPL1A (ENSPCOG00000026731) #14	IMPACT (ENSPCOG00000015567) #15	ZNF521 (ENSPCOG00000003783) #18	ENSPCOG00000005637 #19	PSMA8 (ENSPCOG00000016573) #20	TAF4B (ENSPCOG00000019250) #22	ENSPCOG00000018213	KCTD1 (ENSPCOG00000028099) #24	AQP4 (ENSPCOG00000026243) #26	CHST9 (ENSPCOG00000026106) #27	CDH2 (ENSPCOG00000014519) #29	ENSPCOG00000014236	ENSPCOG00000007456
Bushbaby	MODERN SPECIES	127	RIOK3 (ENSOGAG00000014502)	RMC1 (ENSOGAG00000014511) #7	NPC1 (ENSOGAG00000014516) #8	ANKRD29 (ENSOGAG00000014521) #9	LAMA3 (ENSOGAG00000014522) #10	TTC39C (ENSOGAG00000015961) #12	ENSOGAG00000015965 #13	OSBPL1A (ENSOGAG00000015970) #14	IMPACT (ENSOGAG00000009485) #15	HRH4 (ENSOGAG00000008382) #16	ZNF521 (ENSOGAG00000007195) #18	ENSOGAG00000024844	ENSOGAG00000028907	SS18 (ENSOGAG00000003180) #19	PSMA8 (ENSOGAG00000011233) #20	TAF4B (ENSOGAG00000014592) #22	ENSOGAG00000014600 #24	AQP4 (ENSOGAG00000003911) #26	CHST9 (ENSOGAG00000003913) #27	ENSOGAG00000033936	CDH2 (ENSOGAG00000002381) #29	DSC3 (ENSOGAG00000012204) #31	DSC2 (ENSOGAG00000010189) #32	DSC1 (ENSOGAG00000010195) #33	DSG1 (ENSOGAG00000028967) #34	DSG4 (ENSOGAG00000009937) #35	DSG3 (ENSOGAG00000008454) #36	DSG2 (ENSOGAG00000016775) #37	TTR (ENSOGAG00000016778)	B4GALT6 (ENSOGAG00000016779)	TRAPPC8 (ENSOGAG00000006321)
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00910000146942	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568
Glires	ANCESTRAL SPECIES	23	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00910000146942	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568
Rodentia	ANCESTRAL SPECIES	23	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Kangaroo rat	MODERN SPECIES	344	Riok3 (ENSDORG00000011663)	Rmc1 (ENSDORG00000009591) #7	Npc1 (ENSDORG00000009593) #8	Ankrd29 (ENSDORG00000009596) #9	ENSDORG00000025608 #10	ENSDORG00000007343 #10	Ttc39c (ENSDORG00000016739) #12	ENSDORG00000028513 #13	ENSDORG00000028811 #14	ENSDORG00000028033 #14	Impact (ENSDORG00000008055) #15	Hrh4 (ENSDORG00000008057) #16	Zfp521 (ENSDORG00000013718) #18	Ss18 (ENSDORG00000009314) #19	Psma8 (ENSDORG00000009316) #20	Taf4b (ENSDORG00000014517) #22	Kctd1 (ENSDORG00000006020) #24	Aqp4 (ENSDORG00000008152) #26	Chst9 (ENSDORG00000007818) #27	Cdh2 (ENSDORG00000003504) #29	Dsc3 (ENSDORG00000009594) #31	Dsc2 (ENSDORG00000009592) #32	Dsc1 (ENSDORG00000009590) #33	ENSDORG00000012113 #34	Dsg4 (ENSDORG00000012128) #35	Dsg3 (ENSDORG00000016511) #36	ENSDORG00000026582 #37	Ttr (ENSDORG00000012678)	B4galt6 (ENSDORG00000029583)	Trappc8 (ENSDORG00000002918)	Rnf125 (ENSDORG00000024503)
Myomorpha	ANCESTRAL SPECIES	45	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Muroidea	ANCESTRAL SPECIES	46	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Cricetinae	ANCESTRAL SPECIES	14	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	92	Tmem241 (ENSCGRG00001015184)	Riok3 (ENSCGRG00001013249)	Rmc1 (ENSCGRG00001014209) #7	Npc1 (ENSCGRG00001018684) #8	Ankrd29 (ENSCGRG00001014314) #9	Lama3 (ENSCGRG00001008813) #10	Ttc39c (ENSCGRG00001022129) #12	Cabyr (ENSCGRG00001010088) #13	Osbpl1a (ENSCGRG00001000881) #14	ENSCGRG00001008388	Impact (ENSCGRG00001014462) #15	Hrh4 (ENSCGRG00001020367) #16	Zfp521 (ENSCGRG00001024510) #18	Ss18 (ENSCGRG00001023153) #19	Psma8 (ENSCGRG00001022616) #20	Taf4b (ENSCGRG00001003694) #22	ENSCGRG00001021440	Kctd1 (ENSCGRG00001007208) #24	Aqp4 (ENSCGRG00001023202) #26	Chst9 (ENSCGRG00001013825) #27	Cdh2 (ENSCGRG00001015862) #29	ENSCGRG00001019027	ENSCGRG00001020686	ENSCGRG00001000131	Dsc3 (ENSCGRG00001018804) #31	Dsc2 (ENSCGRG00001024514) #32	Dsc1 (ENSCGRG00001018340) #33	ENSCGRG00001018683 #34	Dsg4 (ENSCGRG00001015415) #35	Dsg3 (ENSCGRG00001017357) #36	Ttr (ENSCGRG00001021304)
Golden Hamster	MODERN SPECIES	619	Cables1 (ENSMAUG00000021209)	ENSMAUG00000014369	Riok3 (ENSMAUG00000020527)	Rmc1 (ENSMAUG00000002841) #7	Npc1 (ENSMAUG00000011294) #8	Ankrd29 (ENSMAUG00000001273) #9	Lama3 (ENSMAUG00000014571) #10	Ttc39c (ENSMAUG00000001012) #12	Cabyr (ENSMAUG00000009212) #13	Osbpl1a (ENSMAUG00000012839) #14	Impact (ENSMAUG00000018528) #15	Hrh4 (ENSMAUG00000002034) #16	Zfp521 (ENSMAUG00000018583) #18	Ss18 (ENSMAUG00000019395) #19	Psma8 (ENSMAUG00000017223) #20	Taf4b (ENSMAUG00000000960) #22	Kctd1 (ENSMAUG00000012159) #24	Aqp4 (ENSMAUG00000017449) #26	Chst9 (ENSMAUG00000012710) #27	Cdh2 (ENSMAUG00000014636) #29	Dsc3 (ENSMAUG00000013762) #31	Dsc2 (ENSMAUG00000010434) #32	Dsc1 (ENSMAUG00000000925) #33	ENSMAUG00000021176 #34	Dsg4 (ENSMAUG00000010495) #35	Dsg3 (ENSMAUG00000011710) #36	Dsg2 (ENSMAUG00000018653) #37	Ttr (ENSMAUG00000011770)	B4galt6 (ENSMAUG00000016396)	Trappc8 (ENSMAUG00000016177)	ENSMAUG00000009622
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT00950000182895.a.a.a.b.f	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568
Northern American deer mouse	MODERN SPECIES	10	Tmem241 (ENSPEMG00000017338)	Riok3 (ENSPEMG00000023794)	Rmc1 (ENSPEMG00000022078) #7	Npc1 (ENSPEMG00000023382) #8	Ankrd29 (ENSPEMG00000003235) #9	ENSPEMG00000030013 #10	ENSPEMG00000016767 #10	Ttc39c (ENSPEMG00000007592) #12	ENSPEMG00000025747 #13	Osbpl1a (ENSPEMG00000014841) #14	Impact (ENSPEMG00000029969) #15	Hrh4 (ENSPEMG00000014230) #16	Zfp521 (ENSPEMG00000001995) #18	Ss18 (ENSPEMG00000014583) #19	Psma8 (ENSPEMG00000008949) #20	Taf4b (ENSPEMG00000019174) #22	ENSPEMG00000018321 #24	Aqp4 (ENSPEMG00000029003) #26	Chst9 (ENSPEMG00000006948) #27	Cdh2 (ENSPEMG00000018458) #29	ENSPEMG00000030174	Dsc3 (ENSPEMG00000023539) #31	ENSPEMG00000026147	Dsc1 (ENSPEMG00000023922) #33	ENSPEMG00000009841 #34	Dsg4 (ENSPEMG00000016266) #35	ENSPEMG00000023683 #36	Dsg2 (ENSPEMG00000011444) #37	Ttr (ENSPEMG00000024235)	B4galt6 (ENSPEMG00000011754)	Trappc8 (ENSPEMG00000010916)
Prairie vole	MODERN SPECIES	5	Npc1 (ENSMOCG00000014032) #8	Ankrd29 (ENSMOCG00000015884) #9	Lama3 (ENSMOCG00000020402) #10	Ttc39c (ENSMOCG00000019093) #12	Cabyr (ENSMOCG00000017399) #13	ENSMOCG00000019839 #14	ENSMOCG00000022203 #14	Impact (ENSMOCG00000009264) #15	Hrh4 (ENSMOCG00000016549) #16	ENSMOCG00000009042	Zfp521 (ENSMOCG00000021972) #18	ENSMOCG00000000611	ENSMOCG00000000904	Ss18 (ENSMOCG00000008443) #19	Psma8 (ENSMOCG00000016308) #20	Taf4b (ENSMOCG00000000743) #22	Kctd1 (ENSMOCG00000003075) #24	ENSMOCG00000012425	Aqp4 (ENSMOCG00000017811) #26	Chst9 (ENSMOCG00000016675) #27	Dsc3 (ENSMOCG00000012014) #31	Dsc2 (ENSMOCG00000014974) #32	Dsc1 (ENSMOCG00000005177) #33	ENSMOCG00000020919 #34	Dsg4 (ENSMOCG00000016289) #35	Dsg3 (ENSMOCG00000018195) #36	Dsg2 (ENSMOCG00000015887) #37	Ttr (ENSMOCG00000002400)	B4galt6 (ENSMOCG00000012621)	Trappc8 (ENSMOCG00000020417)	Rnf125 (ENSMOCG00000022723)
Murinae	ANCESTRAL SPECIES	17	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Mus	ANCESTRAL SPECIES	19	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Mus_A	ANCESTRAL SPECIES	19	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00950000183087.A.a.a.b	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b.d #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Mus_B	ANCESTRAL SPECIES	19	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00950000183087.A.a.a.b	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b.d #34	ENSGT01030000234624.b.a.b.a.b.c #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568
Mus_C	ANCESTRAL SPECIES	16	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00950000183087.A.a.a.b	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b.d #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
spretus	MODERN SPECIES	9	Tmem241 (MGP_SPRETEiJ_G0022915)	Riok3 (MGP_SPRETEiJ_G0022916)	Rmc1 (MGP_SPRETEiJ_G0022917) #7	Npc1 (MGP_SPRETEiJ_G0022918) #8	Ankrd29 (MGP_SPRETEiJ_G0022919) #9	Lama3 (MGP_SPRETEiJ_G0022920) #10	Ttc39c (MGP_SPRETEiJ_G0022921) #12	Cabyr (MGP_SPRETEiJ_G0022922) #13	Osbpl1a (MGP_SPRETEiJ_G0022923) #14	Impact (MGP_SPRETEiJ_G0022924) #15	Hrh4 (MGP_SPRETEiJ_G0022925) #16	Zfp521 (MGP_SPRETEiJ_G0022926) #18	MGP_SPRETEiJ_G0022927	Ss18 (MGP_SPRETEiJ_G0022928) #19	Psma8 (MGP_SPRETEiJ_G0022929) #20	Taf4b (MGP_SPRETEiJ_G0022930) #22	Kctd1 (MGP_SPRETEiJ_G0022931) #24	Aqp4 (MGP_SPRETEiJ_G0022932) #26	Chst9 (MGP_SPRETEiJ_G0022933) #27	Cdh2 (MGP_SPRETEiJ_G0022934) #29	Dsc3 (MGP_SPRETEiJ_G0022935) #31	Dsc2 (MGP_SPRETEiJ_G0022936) #32	Dsc1 (MGP_SPRETEiJ_G0022937) #33	Dsg4 (MGP_SPRETEiJ_G0022938) #35	MGP_SPRETEiJ_G0022939 #36	Dsg2 (MGP_SPRETEiJ_G0022940) #37	Ttr (MGP_SPRETEiJ_G0022941)	B4galt6 (MGP_SPRETEiJ_G0022942)	Trappc8 (MGP_SPRETEiJ_G0022943)	Rnf125 (MGP_SPRETEiJ_G0022944)	Rnf138 (MGP_SPRETEiJ_G0022945)
Steppe mouse	MODERN SPECIES	3229					ENSMSIG00000007290 #10	Ttc39c (ENSMSIG00000007224) #12	Cabyr (ENSMSIG00000007159) #13	Osbpl1a (ENSMSIG00000006873) #14	Impact (ENSMSIG00000006812) #15	ENSMSIG00000006798	Hrh4 (ENSMSIG00000006789) #16	Zfp521 (ENSMSIG00000006761) #18	ENSMSIG00000006731	Ss18 (ENSMSIG00000006510) #19	Psma8 (ENSMSIG00000006470) #20	Taf4b (ENSMSIG00000006310) #22	Kctd1 (ENSMSIG00000006254) #24
Mouse	MODERN SPECIES	9	Cables1 (ENSMUSG00000040957)	Tmem241 (ENSMUSG00000049411)	Riok3 (ENSMUSG00000024404)	Rmc1 (ENSMUSG00000024410) #7	Npc1 (ENSMUSG00000024413) #8	Ankrd29 (ENSMUSG00000057766) #9	Lama3 (ENSMUSG00000024421) #10	Ttc39c (ENSMUSG00000024424) #12	Cabyr (ENSMUSG00000024430) #13	Osbpl1a (ENSMUSG00000044252) #14	Impact (ENSMUSG00000024423) #15	Hrh4 (ENSMUSG00000037346) #16	Zfp521 (ENSMUSG00000024420) #18	Ss18 (ENSMUSG00000037013) #19	Psma8 (ENSMUSG00000036743) #20	Taf4b (ENSMUSG00000054321) #22	Kctd1 (ENSMUSG00000036225) #24	Aqp4 (ENSMUSG00000024411) #26	Chst9 (ENSMUSG00000047161) #27	Cdh2 (ENSMUSG00000024304) #29	Dsc3 (ENSMUSG00000059898) #31	Dsc2 (ENSMUSG00000024331) #32	Dsc1 (ENSMUSG00000044322) #33	Dsg1c (ENSMUSG00000034774) #34	Dsg1a (ENSMUSG00000069441) #34	Dsg1b (ENSMUSG00000061928) #34	Dsg4 (ENSMUSG00000001804) #35	Dsg3 (ENSMUSG00000056632) #36	Dsg2 (ENSMUSG00000044393) #37	Ttr (ENSMUSG00000061808)	B4galt6 (ENSMUSG00000056124)
Ryukyu mouse	MODERN SPECIES	9	Riok3 (MGP_CAROLIEiJ_G0022001)	Rmc1 (MGP_CAROLIEiJ_G0022002) #7	Npc1 (MGP_CAROLIEiJ_G0022003) #8	Ankrd29 (MGP_CAROLIEiJ_G0022004) #9	Lama3 (MGP_CAROLIEiJ_G0022005) #10	MGP_CAROLIEiJ_G0022006	Ttc39c (MGP_CAROLIEiJ_G0022007) #12	Cabyr (MGP_CAROLIEiJ_G0022008) #13	Osbpl1a (MGP_CAROLIEiJ_G0022009) #14	Impact (MGP_CAROLIEiJ_G0022010) #15	Hrh4 (MGP_CAROLIEiJ_G0022011) #16	Zfp521 (MGP_CAROLIEiJ_G0022012) #18	MGP_CAROLIEiJ_G0022013	Ss18 (MGP_CAROLIEiJ_G0022014) #19	Psma8 (MGP_CAROLIEiJ_G0022015) #20	Taf4b (MGP_CAROLIEiJ_G0022016) #22	Kctd1 (MGP_CAROLIEiJ_G0022017) #24	Aqp4 (MGP_CAROLIEiJ_G0022018) #26	Chst9 (MGP_CAROLIEiJ_G0022019) #27	Cdh2 (MGP_CAROLIEiJ_G0022020) #29	Dsc3 (MGP_CAROLIEiJ_G0022021) #31	Dsc2 (MGP_CAROLIEiJ_G0022022) #32	Dsc1 (MGP_CAROLIEiJ_G0022023) #33	MGP_CAROLIEiJ_G0022024 #34	MGP_CAROLIEiJ_G0022025 #34	MGP_CAROLIEiJ_G0022026 #34	Dsg4 (MGP_CAROLIEiJ_G0022027) #35	MGP_CAROLIEiJ_G0022028 #36	Dsg2 (MGP_CAROLIEiJ_G0022029) #37	Ttr (MGP_CAROLIEiJ_G0022030)	B4galt6 (MGP_CAROLIEiJ_G0022031)
Shrew mouse	MODERN SPECIES	6	Cables1 (MGP_PahariEiJ_G0018737)	Tmem241 (MGP_PahariEiJ_G0018738)	Riok3 (MGP_PahariEiJ_G0018739)	Rmc1 (MGP_PahariEiJ_G0018740) #7	Npc1 (MGP_PahariEiJ_G0018741) #8	Ankrd29 (MGP_PahariEiJ_G0018742) #9	Lama3 (MGP_PahariEiJ_G0018743) #10	Ttc39c (MGP_PahariEiJ_G0018744) #12	Cabyr (MGP_PahariEiJ_G0018745) #13	Osbpl1a (MGP_PahariEiJ_G0018746) #14	Impact (MGP_PahariEiJ_G0018747) #15	Hrh4 (MGP_PahariEiJ_G0018748) #16	Zfp521 (MGP_PahariEiJ_G0018749) #18	Ss18 (MGP_PahariEiJ_G0018750) #19	Psma8 (MGP_PahariEiJ_G0018751) #20	Taf4b (MGP_PahariEiJ_G0018752) #22	Kctd1 (MGP_PahariEiJ_G0018753) #24	Aqp4 (MGP_PahariEiJ_G0018754) #26	Chst9 (MGP_PahariEiJ_G0018755) #27	MGP_PahariEiJ_G0018756	Cdh2 (MGP_PahariEiJ_G0018757) #29	Dsc3 (MGP_PahariEiJ_G0018758) #31	Dsc2 (MGP_PahariEiJ_G0018759) #32	Dsc1 (MGP_PahariEiJ_G0018760) #33	Dsg4 (MGP_PahariEiJ_G0018761) #35	Dsg3 (MGP_PahariEiJ_G0018762) #36	Dsg2 (MGP_PahariEiJ_G0018763) #37	Ttr (MGP_PahariEiJ_G0018764)	B4galt6 (MGP_PahariEiJ_G0018765)	Trappc8 (MGP_PahariEiJ_G0018766)	Rnf125 (MGP_PahariEiJ_G0018767)
Rat	MODERN SPECIES	9	Tmem241 (ENSRNOG00000023412)	Riok3 (ENSRNOG00000023376)	Rmc1 (ENSRNOG00000012597) #7	Npc1 (ENSRNOG00000012016) #8	Ankrd29 (ENSRNOG00000046744) #9	Lama3 (ENSRNOG00000011300) #10	Ttc39c (ENSRNOG00000050949) #12	Cabyr (ENSRNOG00000047436) #13	Osbpl1a (ENSRNOG00000054058) #14	Impact (ENSRNOG00000045844) #15	Hrh4 (ENSRNOG00000016887) #16	LOC108349606 (ENSRNOG00000031244)	Zfp521 (ENSRNOG00000016874) #18	Ss18 (ENSRNOG00000016800) #19	Psma8 (ENSRNOG00000030363) #20	Taf4b (ENSRNOG00000026023) #22	Kctd1 (ENSRNOG00000016467) #24	Rpl39 (ENSRNOG00000034237)	Aqp4 (ENSRNOG00000016043) #26	Chst9 (ENSRNOG00000015867) #27	AC118833.1 (ENSRNOG00000038412)	Cdh2 (ENSRNOG00000015602) #29	Dsc3 (ENSRNOG00000017159) #31	Dsc2 (ENSRNOG00000039969) #32	Dsc1 (ENSRNOG00000056258) #33	ENSRNOG00000069260	ENSRNOG00000062351	Dsg1 (ENSRNOG00000016853) #34	Dsg3 (ENSRNOG00000016632) #36	Dsg2 (ENSRNOG00000016526) #37	Ttr (ENSRNOG00000016275)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1398	Tmem241 (ENSNGAG00000005814)	Riok3 (ENSNGAG00000011446)	Rmc1 (ENSNGAG00000017431) #7	Npc1 (ENSNGAG00000013904) #8	Ankrd29 (ENSNGAG00000015734) #9	Lama3 (ENSNGAG00000016262) #10	Ttc39c (ENSNGAG00000000053) #12	ENSNGAG00000000982 #13	ENSNGAG00000016344 #14	ENSNGAG00000018573 #14	Impact (ENSNGAG00000000315) #15	ENSNGAG00000001463 #16	Zfp521 (ENSNGAG00000011355) #18	Ss18 (ENSNGAG00000013134) #19	Psma8 (ENSNGAG00000015507) #20	Taf4b (ENSNGAG00000016659) #22	ENSNGAG00000011519	Kctd1 (ENSNGAG00000019580) #24	Aqp4 (ENSNGAG00000020272) #26	Chst9 (ENSNGAG00000002874) #27
Lesser Egyptian jerboa	MODERN SPECIES	55	Rmc1 (ENSJJAG00000018244) #7	Npc1 (ENSJJAG00000012547) #8	Ankrd29 (ENSJJAG00000016034) #9	ENSJJAG00000018224 #10	ENSJJAG00000006606 #10	Ttc39c (ENSJJAG00000019984) #12	ENSJJAG00000016642 #13	ENSJJAG00000016064 #14	ENSJJAG00000015785 #14	Impact (ENSJJAG00000024285) #15	Hrh4 (ENSJJAG00000016339) #16	Zfp521 (ENSJJAG00000021105) #18	Ss18 (ENSJJAG00000018177) #19	Psma8 (ENSJJAG00000022332) #20	ENSJJAG00000020342	Taf4b (ENSJJAG00000022407) #22	Kctd1 (ENSJJAG00000014053) #24	Aqp4 (ENSJJAG00000010534) #26	Chst9 (ENSJJAG00000018791) #27	ENSJJAG00000017817 #29	Dsc3 (ENSJJAG00000021751) #31	Dsc2 (ENSJJAG00000018645) #32	Dsc1 (ENSJJAG00000019058) #33	ENSJJAG00000024247 #34	Dsg4 (ENSJJAG00000020875) #35	Dsg3 (ENSJJAG00000000893) #36	ENSJJAG00000023133 #37	Ttr (ENSJJAG00000013612)	B4galt6 (ENSJJAG00000001465)	ENSJJAG00000022562	Plpp2 (ENSJJAG00000022738)
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Naked mole-rat female	MODERN SPECIES	9	RMC1 (ENSHGLG00000009136) #7	NPC1 (ENSHGLG00000004320) #8	ANKRD29 (ENSHGLG00000003687) #9	ENSHGLG00000047717	LAMA3 (ENSHGLG00000007164) #10	TTC39C (ENSHGLG00000004150) #12	ENSHGLG00000033917	ENSHGLG00000007031 #13	OSBPL1A (ENSHGLG00000005475) #14	IMPACT (ENSHGLG00000032618) #15	ENSHGLG00000043231 #16	ZNF521 (ENSHGLG00000003785) #18	SS18 (ENSHGLG00000007496) #19	ENSHGLG00000020165	PSMA8 (ENSHGLG00000009316) #20	TAF4B (ENSHGLG00000007544) #22	KCTD1 (ENSHGLG00000018260) #24	AQP4 (ENSHGLG00000039169) #26	CHST9 (ENSHGLG00000042304) #27	ENSHGLG00000007487 #29	ENSHGLG00000040245	ENSHGLG00000004019	ENSHGLG00000049706	ENSHGLG00000042691	ENSHGLG00000018510 #31	DSC2 (ENSHGLG00000018208) #32	DSC1 (ENSHGLG00000007182) #33	DSG1 (ENSHGLG00000003726) #34	DSG4 (ENSHGLG00000007440) #35	DSG3 (ENSHGLG00000033832) #36	DSG2 (ENSHGLG00000018540) #37
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Long-tailed chinchilla	MODERN SPECIES	109	CABLES1 (ENSCLAG00000009135)	TMEM241 (ENSCLAG00000008159)	RIOK3 (ENSCLAG00000006767)	RMC1 (ENSCLAG00000007215) #7	NPC1 (ENSCLAG00000008539) #8	ENSCLAG00000009107 #9	ENSCLAG00000010376 #10	TTC39C (ENSCLAG00000012781) #12	ENSCLAG00000015684 #13	OSBPL1A (ENSCLAG00000011248) #14	IMPACT (ENSCLAG00000008879) #15	HRH4 (ENSCLAG00000009200) #16	ZNF521 (ENSCLAG00000010565) #18	SS18 (ENSCLAG00000012381) #19	PSMA8 (ENSCLAG00000009449) #20	TAF4B (ENSCLAG00000006974) #22	KCTD1 (ENSCLAG00000007823) #24	CHST9 (ENSCLAG00000008170) #27	CDH2 (ENSCLAG00000015205) #29	ENSCLAG00000016416	DSC3 (ENSCLAG00000016462) #31	DSC2 (ENSCLAG00000010145) #32	DSC1 (ENSCLAG00000012931) #33	DSG1 (ENSCLAG00000009520) #34	DSG4 (ENSCLAG00000014083) #35	DSG3 (ENSCLAG00000014163) #36	ENSCLAG00000012614 #37	TTR (ENSCLAG00000016064)	B4GALT6 (ENSCLAG00000016196)	TRAPPC8 (ENSCLAG00000016681)	RNF125 (ENSCLAG00000008643)
Degu	MODERN SPECIES	44												ENSODEG00000018302	ZNF521 (ENSODEG00000018410) #18	SS18 (ENSODEG00000018466) #19	PSMA8 (ENSODEG00000018364) #20	TAF4B (ENSODEG00000018462) #22	ENSODEG00000020494	KCTD1 (ENSODEG00000018447) #24	AQP4 (ENSODEG00000018294) #26	CHST9 (ENSODEG00000018320) #27	CDH2 (ENSODEG00000018382) #29	ENSODEG00000020488	DSC3 (ENSODEG00000018293) #31	DSC2 (ENSODEG00000018413) #32	DSC1 (ENSODEG00000018325) #33	DSG1 (ENSODEG00000018310) #34	DSG4 (ENSODEG00000018468) #35	DSG3 (ENSODEG00000018316) #36	ENSODEG00000018312 #37	TTR (ENSODEG00000018347)	B4GALT6 (ENSODEG00000018324)
Guinea pig	MODERN SPECIES	14	CABLES1 (ENSCPOG00000010935)	ENSCPOG00000007986	RIOK3 (ENSCPOG00000007991)	RMC1 (ENSCPOG00000006222) #7	NPC1 (ENSCPOG00000006230) #8	ANKRD29 (ENSCPOG00000007611) #9	LAMA3 (ENSCPOG00000007620) #10	TTC39C (ENSCPOG00000025455) #12	CABYR (ENSCPOG00000008281) #13	OSBPL1A (ENSCPOG00000008285) #14	IMPACT (ENSCPOG00000035662) #15	HRH4 (ENSCPOG00000001943) #16	ZNF521 (ENSCPOG00000015173) #18	SS18 (ENSCPOG00000004706) #19	PSMA8 (ENSCPOG00000012268) #20	TAF4B (ENSCPOG00000001414) #22	ENSCPOG00000003866 #24	AQP4 (ENSCPOG00000004446) #26	CHST9 (ENSCPOG00000010439) #27	CDH2 (ENSCPOG00000012391) #29	DSC2 (ENSCPOG00000005506) #32	DSC1 (ENSCPOG00000038286) #33	DSG1 (ENSCPOG00000005375) #34	DSG4 (ENSCPOG00000005388) #35	ENSCPOG00000036894 #36	DSG2 (ENSCPOG00000038318) #37	TTR (ENSCPOG00000012845)	B4GALT6 (ENSCPOG00000039163)	TRAPPC8 (ENSCPOG00000012560)	RNF125 (ENSCPOG00000033178)	RNF138 (ENSCPOG00000003463)
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Marmotini	ANCESTRAL SPECIES	31	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638.qb #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Alpin marmot	MODERN SPECIES	10	RMC1 (ENSMMMG00000009792) #7	NPC1 (ENSMMMG00000009738) #8	ANKRD29 (ENSMMMG00000009665) #9	ENSMMMG00000009651 #10	ENSMMMG00000009558 #10	TTC39C (ENSMMMG00000009511) #12	ENSMMMG00000009452 #13	OSBPL1A (ENSMMMG00000009196) #14	IMPACT (ENSMMMG00000009173) #15	HRH4 (ENSMMMG00000009142) #16	ZNF521 (ENSMMMG00000009091) #18	ENSMMMG00000009075	ENSMMMG00000008900 #19	PSMA8 (ENSMMMG00000008885) #20	ENSMMMG00000008879	TAF4B (ENSMMMG00000008851) #22	ENSMMMG00000008841 #24	ENSMMMG00000008830	AQP4 (ENSMMMG00000008817) #26	CHST9 (ENSMMMG00000008809) #27	CDH2 (ENSMMMG00000008743) #29	DSC3 (ENSMMMG00000008685) #31	DSC2 (ENSMMMG00000008624) #32	DSC1 (ENSMMMG00000008573) #33	DSG1 (ENSMMMG00000008551) #34	DSG4 (ENSMMMG00000008531) #35	DSG3 (ENSMMMG00000008516) #36	DSG2 (ENSMMMG00000008445) #37	ENSMMMG00000008437	B4GALT6 (ENSMMMG00000008421)	TRAPPC8 (ENSMMMG00000008335)
Marmotini_b	ANCESTRAL SPECIES	146	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638.qb #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29
Squirrel	MODERN SPECIES	150	CABLES1 (ENSSTOG00000010410)	TMEM241 (ENSSTOG00000030216)	RIOK3 (ENSSTOG00000006517)	RMC1 (ENSSTOG00000006546) #7	NPC1 (ENSSTOG00000006597) #8	ANKRD29 (ENSSTOG00000006644) #9	LAMA3 (ENSSTOG00000006658) #10	TTC39C (ENSSTOG00000028349) #12	CABYR (ENSSTOG00000015498) #13	OSBPL1A (ENSSTOG00000006443) #14	IMPACT (ENSSTOG00000027817) #15	HRH4 (ENSSTOG00000010835) #16	ZNF521 (ENSSTOG00000012398) #18	SS18 (ENSSTOG00000015699) #19	PSMA8 (ENSSTOG00000015708) #20	TAF4B (ENSSTOG00000015714) #22	ENSSTOG00000020222 #24	AQP4 (ENSSTOG00000013318) #26	CHST9 (ENSSTOG00000013145) #27	CDH2 (ENSSTOG00000002172) #29
Arctic ground squirrel	MODERN SPECIES	55	RIOK3 (ENSUPAG00010012142)	RMC1 (ENSUPAG00010012152) #7	NPC1 (ENSUPAG00010012172) #8	ANKRD29 (ENSUPAG00010012216) #9	ENSUPAG00010012267 #10	ENSUPAG00010012301 #10	TTC39C (ENSUPAG00010012342) #12	ENSUPAG00010012372 #13	OSBPL1A (ENSUPAG00010012424) #14	ENSUPAG00010012655	IMPACT (ENSUPAG00010012665) #15	HRH4 (ENSUPAG00010012682) #16	ZNF521 (ENSUPAG00010012699) #18	SS18 (ENSUPAG00010012720) #19	PSMA8 (ENSUPAG00010012791) #20	TAF4B (ENSUPAG00010012814) #22	KCTD1 (ENSUPAG00010012862) #24	AQP4 (ENSUPAG00010012893) #26	CHST9 (ENSUPAG00010012950) #27	CDH2 (ENSUPAG00010012964) #29
Eurasian red squirrel	MODERN SPECIES	4	ENSSVLG00005006776	ENSSVLG00005006800	ENSSVLG00005006973	RMC1 (ENSSVLG00005007150) #7	NPC1 (ENSSVLG00005007206) #8	ANKRD29 (ENSSVLG00005007255) #9	TTC39C (ENSSVLG00005009532) #12	CABYR (ENSSVLG00005009576) #13	OSBPL1A (ENSSVLG00005009639) #14	ENSSVLG00005009739 #15	HRH4 (ENSSVLG00005009808) #16	ZNF521 (ENSSVLG00005010017) #18	ENSSVLG00005010156	SS18 (ENSSVLG00005010199) #19	PSMA8 (ENSSVLG00005010327) #20	TAF4B (ENSSVLG00005010504) #22	KCTD1 (ENSSVLG00005010735) #24	ENSSVLG00005010820	ENSSVLG00005010863	AQP4 (ENSSVLG00005010877) #26	CHST9 (ENSSVLG00005010956) #27	ENSSVLG00005011071	CDH2 (ENSSVLG00005011122) #29	ENSSVLG00005011342	DSC3 (ENSSVLG00005011401) #31	DSC2 (ENSSVLG00005011858) #32	DSC1 (ENSSVLG00005012411) #33	DSG1 (ENSSVLG00005012802) #34	DSG4 (ENSSVLG00005013149) #35	ENSSVLG00005013223 #36	DSG2 (ENSSVLG00005013337) #37
Lagomorpha	ANCESTRAL SPECIES	41	ENSGT00400000022086.a	ENSGT00510000048348	ENSGT00940000157008	ENSGT00390000009127 #7	ENSGT00940000156182 #8	ENSGT00940000153902.a #9	ENSGT00940000155638 #10	ENSGT00950000182917.b #12	ENSGT00390000000444 #13	ENSGT00940000155295 #14	ENSGT00390000017571 #15	ENSGT00940000162118 #16	ENSGT00940000159287 #18	ENSGT00940000156352 #19	ENSGT00940000160354 #20	ENSGT00390000011620.a.a.a #22	ENSGT00940000156453.a #24	ENSGT00940000156037.a #26	ENSGT00940000160563 #27	ENSGT00940000155981 #29	ENSGT01030000234624.a.a.b #31	ENSGT01030000234624.a.a.a #32	ENSGT01030000234624.a.b #33	ENSGT01030000234624.b.a.b.a.b #34	ENSGT01030000234624.b.a.b.b #35	ENSGT01030000234624.b.a.b.a.a #36	ENSGT01030000234624.b.a.a #37	ENSGT00940000153229.A.a.b	ENSGT00940000158138	ENSGT00390000000568	ENSGT00950000182909.b.a.b
Rabbit	MODERN SPECIES	20	RIOK3 (ENSOCUG00000016820)	RMC1 (ENSOCUG00000009837) #7	NPC1 (ENSOCUG00000009850) #8	ANKRD29 (ENSOCUG00000009866) #9	LAMA3 (ENSOCUG00000009869) #10	TTC39C (ENSOCUG00000017109) #12	ENSOCUG00000024121 #13	OSBPL1A (ENSOCUG00000008393) #14	ENSOCUG00000029300	IMPACT (ENSOCUG00000013901) #15	HRH4 (ENSOCUG00000001327) #16	ZNF521 (ENSOCUG00000005774) #18	SS18 (ENSOCUG00000009081) #19	PSMA8 (ENSOCUG00000009092) #20	ENSOCUG00000013818	TAF4B (ENSOCUG00000005480) #22	ENSOCUG00000014635 #24	ENSOCUG00000035713	ENSOCUG00000037440	AQP4 (ENSOCUG00000008833) #26	CHST9 (ENSOCUG00000004444) #27	CDH2 (ENSOCUG00000003656) #29	ENSOCUG00000023260	ENSOCUG00000034452	ENSOCUG00000030006	ENSOCUG00000021903	DSC3 (ENSOCUG00000029143) #31	DSC2 (ENSOCUG00000012518) #32	DSC1 (ENSOCUG00000012534) #33	DSG1 (ENSOCUG00000006498) #34	DSG4 (ENSOCUG00000007342) #35
Pika	MODERN SPECIES	3426																ENSOPRG00000010329 #22	ENSOPRG00000010369
Tree shrew	MODERN SPECIES	2013																TAF4B (ENSTBEG00000002967) #22	ENSTBEG00000003350 #24