Bilateria	DUPLICATION
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153498.B.b #22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153498.B.b #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153498.B.b #22
Gnathostomata	ANCESTRAL SPECIES	155																ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Euteleostomi	ANCESTRAL SPECIES	11	ENSGT00530000063929.a.b	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Sarcopterygii	ANCESTRAL SPECIES	16	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00940000165946	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00940000165946	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000163170	ENSGT00390000002042	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Theria	ANCESTRAL SPECIES	4	ENSGT00940000163170	ENSGT00390000002042	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000164734	ENSGT00390000002042	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Tree shrew	MODERN SPECIES	5440															ENSTBEG00000005753 #21	PDSS2 (ENSTBEG00000005164) #22	BEND3 (ENSTBEG00000003684) #23	MTRES1 (ENSTBEG00000003521) #24
Glires	ANCESTRAL SPECIES	5	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00940000165257	ENSGT00940000164734	ENSGT00390000002042	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Rabbit	MODERN SPECIES	3	CD164 (ENSOCUG00000029127)	ENSOCUG00000006035	CEP57L1 (ENSOCUG00000023847)	SESN1 (ENSOCUG00000011814)	ARMC2 (ENSOCUG00000011789)	ENSOCUG00000010471	AFG1L (ENSOCUG00000005862)	SNX3 (ENSOCUG00000005858)	NR2E1 (ENSOCUG00000005853)	OSTM1 (ENSOCUG00000016073)	SEC63 (ENSOCUG00000016430)	ENSOCUG00000035467	ENSOCUG00000013095	SOBP (ENSOCUG00000027804)	ENSOCUG00000030811	PDSS2 (ENSOCUG00000011259) #22	BEND3 (ENSOCUG00000011254) #23	ENSOCUG00000030127	MTRES1 (ENSOCUG00000011248) #24	QRSL1 (ENSOCUG00000028175)	CRYBG1 (ENSOCUG00000013366)	ENSOCUG00000033572	RTN4IP1 (ENSOCUG00000013383)	ATG5 (ENSOCUG00000013358)	PRDM1 (ENSOCUG00000015495)	PREP (ENSOCUG00000000188)	POPDC3 (ENSOCUG00000025973)	BVES (ENSOCUG00000016944)	LIN28B (ENSOCUG00000017850)	ENSOCUG00000037658	ENSOCUG00000036629
Pika	MODERN SPECIES	2884														ENSOPRG00000000595	SOBP (ENSOPRG00000000589)	PDSS2 (ENSOPRG00000000582) #22
Rodentia	ANCESTRAL SPECIES	6	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Hystricomorpha	ANCESTRAL SPECIES	41	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Hystricomorpha_a	ANCESTRAL SPECIES	46	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Hystricomorpha_b	ANCESTRAL SPECIES	41	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Long-tailed chinchilla	MODERN SPECIES	118	PPIL6 (ENSCLAG00000009714)	CD164 (ENSCLAG00000009279)	ENSCLAG00000009929	CEP57L1 (ENSCLAG00000010353)	SESN1 (ENSCLAG00000012296)	ENSCLAG00000009751	ENSCLAG00000009801	ENSCLAG00000010630	AFG1L (ENSCLAG00000012599)	SNX3 (ENSCLAG00000011964)	NR2E1 (ENSCLAG00000017092)	OSTM1 (ENSCLAG00000014636)	SEC63 (ENSCLAG00000010535)	SCML4 (ENSCLAG00000009941)	SOBP (ENSCLAG00000009567)	PDSS2 (ENSCLAG00000011033) #22	BEND3 (ENSCLAG00000009701) #23	MTRES1 (ENSCLAG00000017356) #24	CD24 (ENSCLAG00000011622)	QRSL1 (ENSCLAG00000017367)	RTN4IP1 (ENSCLAG00000014920)	CRYBG1 (ENSCLAG00000009357)	ATG5 (ENSCLAG00000012682)	PRDM1 (ENSCLAG00000011847)	PREP (ENSCLAG00000014176)	POPDC3 (ENSCLAG00000011005)	BVES (ENSCLAG00000010963)	LIN28B (ENSCLAG00000010534)	HACE1 (ENSCLAG00000016992)	GRIK2 (ENSCLAG00000011506)	ASCC3 (ENSCLAG00000009794)
Guinea pig	MODERN SPECIES	63	SMPD2 (ENSCPOG00000003102)	PPIL6 (ENSCPOG00000003098)	CD164 (ENSCPOG00000034850)	ENSCPOG00000012574	CEP57L1 (ENSCPOG00000035572)	SESN1 (ENSCPOG00000013793)	ARMC2 (ENSCPOG00000006505)	ENSCPOG00000021906	AFG1L (ENSCPOG00000011326)	SNX3 (ENSCPOG00000032088)	NR2E1 (ENSCPOG00000000097)	OSTM1 (ENSCPOG00000010183)	SEC63 (ENSCPOG00000002486)	SCML4 (ENSCPOG00000012909)	SOBP (ENSCPOG00000012904)	PDSS2 (ENSCPOG00000009293) #22	BEND3 (ENSCPOG00000036541) #23	MTRES1 (ENSCPOG00000003134) #24	QRSL1 (ENSCPOG00000021670)	RTN4IP1 (ENSCPOG00000007055)	ENSCPOG00000003512	ATG5 (ENSCPOG00000014065)	PRDM1 (ENSCPOG00000014064)	PREP (ENSCPOG00000012377)	POPDC3 (ENSCPOG00000040175)	BVES (ENSCPOG00000034314)	LIN28B (ENSCPOG00000006178)	HACE1 (ENSCPOG00000001068)	GRIK2 (ENSCPOG00000001674)	ASCC3 (ENSCPOG00000013989)	SIM1 (ENSCPOG00000013987)
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000013638	ENSHGLG00000002635	ENSHGLG00000033612	ENSHGLG00000048021	ENSHGLG00000002946	AFG1L (ENSHGLG00000003193)	ENSHGLG00000035411	ENSHGLG00000003277	NR2E1 (ENSHGLG00000003792)	OSTM1 (ENSHGLG00000012295)	ENSHGLG00000041350	SEC63 (ENSHGLG00000012594)	ENSHGLG00000048253	SCML4 (ENSHGLG00000013722)	SOBP (ENSHGLG00000006724)	PDSS2 (ENSHGLG00000002304) #22	BEND3 (ENSHGLG00000002571) #23	ENSHGLG00000002930 #24	ENSHGLG00000045391	ENSHGLG00000003147	ENSHGLG00000034826	QRSL1 (ENSHGLG00000003294)	RTN4IP1 (ENSHGLG00000005284)	CRYBG1 (ENSHGLG00000002704)	ATG5 (ENSHGLG00000003994)	ENSHGLG00000004528	ENSHGLG00000006497	ENSHGLG00000009582	ENSHGLG00000032977	ENSHGLG00000041910	ENSHGLG00000044554
Sciuridae	ANCESTRAL SPECIES	1	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Marmotini	ANCESTRAL SPECIES	11	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.u.a.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00390000016836.b.d
Marmotini_b	ANCESTRAL SPECIES	86	ENSGT00940000165946	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.u.a.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00390000016836.b.d
Arctic ground squirrel	MODERN SPECIES	70	PPIL6 (ENSUPAG00010011347)	ENSUPAG00010011356	ENSUPAG00010011362	CEP57L1 (ENSUPAG00010011576)	SESN1 (ENSUPAG00010011586)	ARMC2 (ENSUPAG00010011607)	ENSUPAG00010011642	AFG1L (ENSUPAG00010011647)	SNX3 (ENSUPAG00010011668)	NR2E1 (ENSUPAG00010011686)	OSTM1 (ENSUPAG00010011701)	SEC63 (ENSUPAG00010011708)	SCML4 (ENSUPAG00010011728)	ENSUPAG00010011737	SOBP (ENSUPAG00010011741)	PDSS2 (ENSUPAG00010011770) #22	MTRES1 (ENSUPAG00010011795) #24	ENSUPAG00010011806	ENSUPAG00010011822	QRSL1 (ENSUPAG00010011831)	RTN4IP1 (ENSUPAG00010011859)	CRYBG1 (ENSUPAG00010011893)	ENSUPAG00010012436	ATG5 (ENSUPAG00010012440)	PRDM1 (ENSUPAG00010012448)	PREP (ENSUPAG00010012470)	POPDC3 (ENSUPAG00010012491)	BVES (ENSUPAG00010012511)	ENSUPAG00010012519	LIN28B (ENSUPAG00010012532)	HACE1 (ENSUPAG00010012542)
Squirrel	MODERN SPECIES	164	PPIL6 (ENSSTOG00000011426)	ENSSTOG00000011417	CEP57L1 (ENSSTOG00000019505)	SESN1 (ENSSTOG00000011391)	ENSSTOG00000000896	ENSSTOG00000032092	ENSSTOG00000021457	ENSSTOG00000022339	AFG1L (ENSSTOG00000001115)	SNX3 (ENSSTOG00000007274)	NR2E1 (ENSSTOG00000007248)	ENSSTOG00000012195	SEC63 (ENSSTOG00000009628)	SCML4 (ENSSTOG00000004682)	SOBP (ENSSTOG00000025137)	PDSS2 (ENSSTOG00000015790) #22	BEND3 (ENSSTOG00000026766) #23	MTRES1 (ENSSTOG00000015779) #24	ENSSTOG00000030850	QRSL1 (ENSSTOG00000009177)	RTN4IP1 (ENSSTOG00000009165)	CRYBG1 (ENSSTOG00000026542)	ATG5 (ENSSTOG00000016507)	PRDM1 (ENSSTOG00000016505)	PREP (ENSSTOG00000023845)	POPDC3 (ENSSTOG00000003846)	BVES (ENSSTOG00000003822)	LIN28B (ENSSTOG00000002692)	HACE1 (ENSSTOG00000028610)	ENSSTOG00000025714
Alpin marmot	MODERN SPECIES	2	SMPD2 (ENSMMMG00000014360)	PPIL6 (ENSMMMG00000014353)	ENSMMMG00000014239	ENSMMMG00000014119	CEP57L1 (ENSMMMG00000014071)	SESN1 (ENSMMMG00000014034)	ARMC2 (ENSMMMG00000013988)	ENSMMMG00000013982	ENSMMMG00000013964	AFG1L (ENSMMMG00000013948)	ENSMMMG00000013918	NR2E1 (ENSMMMG00000013897)	OSTM1 (ENSMMMG00000013885)	SEC63 (ENSMMMG00000013834)	SCML4 (ENSMMMG00000013821)	PDSS2 (ENSMMMG00000013802) #22	BEND3 (ENSMMMG00000013770) #23	MTRES1 (ENSMMMG00000013762) #24	ENSMMMG00000013748	QRSL1 (ENSMMMG00000013712)	RTN4IP1 (ENSMMMG00000013695)	ENSMMMG00000013691	CRYBG1 (ENSMMMG00000012703)	ATG5 (ENSMMMG00000012672)	PRDM1 (ENSMMMG00000012643)	PREP (ENSMMMG00000012625)	POPDC3 (ENSMMMG00000012617)	BVES (ENSMMMG00000012613)	ENSMMMG00000012601	HACE1 (ENSMMMG00000012570)	ENSMMMG00000012563
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005015947	ENSSVLG00005016041	CEP57L1 (ENSSVLG00005016399)	SESN1 (ENSSVLG00005016522)	ARMC2 (ENSSVLG00005016787)	ENSSVLG00005006650	AFG1L (ENSSVLG00005006691)	ENSSVLG00005006775	ENSSVLG00005006799	SNX3 (ENSSVLG00005006830)	NR2E1 (ENSSVLG00005006886)	OSTM1 (ENSSVLG00005006950)	SEC63 (ENSSVLG00005006987)	SCML4 (ENSSVLG00005007050)	SOBP (ENSSVLG00005007145)	PDSS2 (ENSSVLG00005007210) #22	BEND3 (ENSSVLG00005007266) #23	MTRES1 (ENSSVLG00005007294) #24	ENSSVLG00005007327	QRSL1 (ENSSVLG00005007356)	RTN4IP1 (ENSSVLG00005007400)	CRYBG1 (ENSSVLG00005007465)	ENSSVLG00005007633	ATG5 (ENSSVLG00005007670)	PRDM1 (ENSSVLG00005007837)	PREP (ENSSVLG00005007952)	POPDC3 (ENSSVLG00005007986)	BVES (ENSSVLG00005008016)	ENSSVLG00005008028	LIN28B (ENSSVLG00005008061)	HACE1 (ENSSVLG00005008141)
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Kangaroo rat	MODERN SPECIES	381	Ccdc162 (ENSDORG00000025217)	Cep57l1 (ENSDORG00000016514)	Sesn1 (ENSDORG00000016747)	Armc2 (ENSDORG00000016746)	Foxo3 (ENSDORG00000029794)	Afg1l (ENSDORG00000014557)	ENSDORG00000027527	Snx3 (ENSDORG00000024533)	ENSDORG00000007523	Ostm1 (ENSDORG00000025626)	Sec63 (ENSDORG00000002266)	ENSDORG00000012141	ENSDORG00000028096	ENSDORG00000030234	ENSDORG00000023606	Pdss2 (ENSDORG00000001388) #22	Bend3 (ENSDORG00000013215) #23	Mtres1 (ENSDORG00000014894) #24	ENSDORG00000024012	Qrsl1 (ENSDORG00000007837)	Rtn4ip1 (ENSDORG00000007834)	ENSDORG00000015211	ENSDORG00000024871	Prdm1 (ENSDORG00000014237)	Prep (ENSDORG00000001108)	Popdc3 (ENSDORG00000024694)	Bves (ENSDORG00000006341)	ENSDORG00000009587	Hace1 (ENSDORG00000012054)	Grik2 (ENSDORG00000015175)	Ascc3 (ENSDORG00000008572)
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Lesser Egyptian jerboa	MODERN SPECIES	78	Cd164 (ENSJJAG00000016224)	Ccdc162 (ENSJJAG00000016412)	ENSJJAG00000022720	Sesn1 (ENSJJAG00000017360)	ENSJJAG00000010323	ENSJJAG00000013525	Foxo3 (ENSJJAG00000002701)	Afg1l (ENSJJAG00000009959)	Snx3 (ENSJJAG00000021440)	Nr2e1 (ENSJJAG00000022055)	ENSJJAG00000018243	Sec63 (ENSJJAG00000015157)	Scml4 (ENSJJAG00000010133)	Sobp (ENSJJAG00000013825)	ENSJJAG00000013046	Pdss2 (ENSJJAG00000018660) #22	Bend3 (ENSJJAG00000015264) #23	Mtres1 (ENSJJAG00000023519) #24	Qrsl1 (ENSJJAG00000012030)	Rtn4ip1 (ENSJJAG00000016075)	ENSJJAG00000017114	Atg5 (ENSJJAG00000015537)	Prdm1 (ENSJJAG00000023075)	Prep (ENSJJAG00000020209)	Popdc3 (ENSJJAG00000014670)	Bves (ENSJJAG00000012371)	Lin28b (ENSJJAG00000011024)	Hace1 (ENSJJAG00000013574)	ENSJJAG00000000658	ENSJJAG00000023039	Grik2 (ENSJJAG00000019973)
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Prairie vole	MODERN SPECIES	358	Ppil6 (ENSMOCG00000007659)	Cd164 (ENSMOCG00000013486)	Ccdc162 (ENSMOCG00000020202)	Cep57l1 (ENSMOCG00000006001)	Sesn1 (ENSMOCG00000014884)	Armc2 (ENSMOCG00000008778)	Foxo3 (ENSMOCG00000013546)	Afg1l (ENSMOCG00000022771)	Snx3 (ENSMOCG00000020843)	Nr2e1 (ENSMOCG00000003990)	Ostm1 (ENSMOCG00000021275)	Sec63 (ENSMOCG00000012910)	Scml4 (ENSMOCG00000004057)	Sobp (ENSMOCG00000019494)	ENSMOCG00000020152	Pdss2 (ENSMOCG00000002520) #22	Bend3 (ENSMOCG00000007344) #23	Mtres1 (ENSMOCG00000016820) #24	ENSMOCG00000019641	Cd24a (ENSMOCG00000004145)	Qrsl1 (ENSMOCG00000015511)	Rtn4ip1 (ENSMOCG00000022655)	Crybg1 (ENSMOCG00000017311)	ENSMOCG00000019458	ENSMOCG00000021295	ENSMOCG00000012673	Rsph4a (ENSMOCG00000015792)	Zup1 (ENSMOCG00000007844)	ENSMOCG00000016429	Fam162b (ENSMOCG00000016808)	Gprc6a (ENSMOCG00000001619)
Northern American deer mouse	MODERN SPECIES	7	Smpd2 (ENSPEMG00000018109)	Ppil6 (ENSPEMG00000005372)	ENSPEMG00000025622	ENSPEMG00000010187	Cep57l1 (ENSPEMG00000011459)	Sesn1 (ENSPEMG00000012311)	Armc2 (ENSPEMG00000011502)	Foxo3 (ENSPEMG00000017580)	Afg1l (ENSPEMG00000016981)	ENSPEMG00000001898	Nr2e1 (ENSPEMG00000014789)	Ostm1 (ENSPEMG00000001749)	Sec63 (ENSPEMG00000018907)	Scml4 (ENSPEMG00000017707)	Sobp (ENSPEMG00000026852)	Pdss2 (ENSPEMG00000010336) #22	Bend3 (ENSPEMG00000031300) #23	Mtres1 (ENSPEMG00000019114) #24	ENSPEMG00000029014	ENSPEMG00000009329	Qrsl1 (ENSPEMG00000009855)	Rtn4ip1 (ENSPEMG00000009749)	Crybg1 (ENSPEMG00000006428)	Atg5 (ENSPEMG00000023746)	Prdm1 (ENSPEMG00000023622)	Prep (ENSPEMG00000015306)	Popdc3 (ENSPEMG00000012534)	Bves (ENSPEMG00000014540)	Lin28b (ENSPEMG00000015724)	Hace1 (ENSPEMG00000006907)	ENSPEMG00000025768
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654
Chinese hamster chok1gshd	MODERN SPECIES	160	Ppil6 (ENSCGRG00001020658)	Cd164 (ENSCGRG00001020972)	ENSCGRG00001022426	Cep57l1 (ENSCGRG00001000573)	Sesn1 (ENSCGRG00001004292)	Armc2 (ENSCGRG00001011760)	Foxo3 (ENSCGRG00001017319)	ENSCGRG00001018045	Afg1l (ENSCGRG00001021263)	ENSCGRG00001021917	Nr2e1 (ENSCGRG00001022746)	Ostm1 (ENSCGRG00001023136)	Sec63 (ENSCGRG00001023456)	Scml4 (ENSCGRG00001000202)	Sobp (ENSCGRG00001000885)	Pdss2 (ENSCGRG00001005143) #22	ENSCGRG00001006245	Bend3 (ENSCGRG00001006904) #23	Mtres1 (ENSCGRG00001007384) #24	ENSCGRG00001008340	QRSL1 (ENSCGRG00001008633)	Rtn4ip1 (ENSCGRG00001010026)	Crybg1 (ENSCGRG00001010879)	ENSCGRG00001015093
Golden Hamster	MODERN SPECIES	655	Ppil6 (ENSMAUG00000002966)	Cd164 (ENSMAUG00000021208)	ENSMAUG00000019439	ENSMAUG00000014530	Cep57l1 (ENSMAUG00000014039)	Sesn1 (ENSMAUG00000018424)	Armc2 (ENSMAUG00000012693)	Foxo3 (ENSMAUG00000013798)	Afg1l (ENSMAUG00000009033)	Snx3 (ENSMAUG00000006058)	Nr2e1 (ENSMAUG00000013609)	Ostm1 (ENSMAUG00000022061)	Sec63 (ENSMAUG00000021173)	Scml4 (ENSMAUG00000016828)	Sobp (ENSMAUG00000003509)	Pdss2 (ENSMAUG00000006752) #22	Bend3 (ENSMAUG00000021184) #23	Mtres1 (ENSMAUG00000015280) #24	ENSMAUG00000020710	Qrsl1 (ENSMAUG00000016387)	Rtn4ip1 (ENSMAUG00000001630)	Crybg1 (ENSMAUG00000017911)
Murinae	ANCESTRAL SPECIES	36	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Mus	ANCESTRAL SPECIES	15	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00900000143316	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.o	ENSGT00900000143316	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Mouse	MODERN SPECIES	1	Smpd2 (ENSMUSG00000019822)	Ppil6 (ENSMUSG00000078451)	Cd164 (ENSMUSG00000019818)	Ccdc162 (ENSMUSG00000075225)	Cep57l1 (ENSMUSG00000019813)	Sesn1 (ENSMUSG00000038332)	Armc2 (ENSMUSG00000071324)	Foxo3 (ENSMUSG00000048756)	Afg1l (ENSMUSG00000038302)	Snx3 (ENSMUSG00000019804)	Nr2e1 (ENSMUSG00000019803)	Ostm1 (ENSMUSG00000038280)	Sec63 (ENSMUSG00000019802)	Scml4 (ENSMUSG00000044770)	Sobp (ENSMUSG00000038248)	Pdss2 (ENSMUSG00000038240) #22	Bend3 (ENSMUSG00000038214) #23	Pam16l (ENSMUSG00000045886)	Mtres1 (ENSMUSG00000019797) #24	Cd24a (ENSMUSG00000047139)	Qrsl1 (ENSMUSG00000019863)	Rtn4ip1 (ENSMUSG00000019864)	Crybg1 (ENSMUSG00000019866)	Atg5 (ENSMUSG00000038160)	Prdm1 (ENSMUSG00000038151)	Prep (ENSMUSG00000019849)	Popdc3 (ENSMUSG00000019848)	Bves (ENSMUSG00000071317)	Lin28b (ENSMUSG00000063804)	Hace1 (ENSMUSG00000038822)	Grik2 (ENSMUSG00000056073)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.o	ENSGT00900000143316	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Steppe mouse	MODERN SPECIES	3355	Ppil6 (ENSMSIG00000030455)	Cd164 (ENSMSIG00000030453)	Ccdc162 (ENSMSIG00000030406)	Cep57l1 (ENSMSIG00000030394)	Sesn1 (ENSMSIG00000030386)	Armc2 (ENSMSIG00000030380)	Foxo3 (ENSMSIG00000030372)	Afg1l (ENSMSIG00000030363)	ENSMSIG00000030359	Nr2e1 (ENSMSIG00000030352)	Ostm1 (ENSMSIG00000030347)	Sec63 (ENSMSIG00000030343)	Scml4 (ENSMSIG00000030317)	Sobp (ENSMSIG00000030314)	ENSMSIG00000030312	Pdss2 (ENSMSIG00000030310) #22	Bend3 (ENSMSIG00000030306) #23	Mtres1 (ENSMSIG00000030303) #24	ENSMSIG00000030302	ENSMSIG00000030301	Qrsl1 (ENSMSIG00000030298)	Rtn4ip1 (ENSMSIG00000030296)	Crybg1 (ENSMSIG00000030293)	ENSMSIG00000030292	Atg5 (ENSMSIG00000030288)	Prdm1 (ENSMSIG00000030278)	ENSMSIG00000030269	Popdc3 (ENSMSIG00000030266)	Bves (ENSMSIG00000030263)	Lin28b (ENSMSIG00000030258)	Hace1 (ENSMSIG00000030256)
spretus	MODERN SPECIES	1	MGP_SPRETEiJ_G0016080	MGP_SPRETEiJ_G0016081	MGP_SPRETEiJ_G0016082	Cep57l1 (MGP_SPRETEiJ_G0016083)	Sesn1 (MGP_SPRETEiJ_G0016084)	Armc2 (MGP_SPRETEiJ_G0016085)	Foxo3 (MGP_SPRETEiJ_G0016086)	Afg1l (MGP_SPRETEiJ_G0016087)	Snx3 (MGP_SPRETEiJ_G0016088)	Nr2e1 (MGP_SPRETEiJ_G0016089)	Ostm1 (MGP_SPRETEiJ_G0016090)	Sec63 (MGP_SPRETEiJ_G0016091)	Scml4 (MGP_SPRETEiJ_G0016092)	Sobp (MGP_SPRETEiJ_G0016093)	MGP_SPRETEiJ_G0016094	Pdss2 (MGP_SPRETEiJ_G0016095) #22	Bend3 (MGP_SPRETEiJ_G0016096) #23	Mtres1 (MGP_SPRETEiJ_G0016097) #24	MGP_SPRETEiJ_G0016098	MGP_SPRETEiJ_G0016099	Qrsl1 (MGP_SPRETEiJ_G0016100)	Rtn4ip1 (MGP_SPRETEiJ_G0016101)	Crybg1 (MGP_SPRETEiJ_G0016102)	Atg5 (MGP_SPRETEiJ_G0016103)	Prdm1 (MGP_SPRETEiJ_G0016104)	Prep (MGP_SPRETEiJ_G0016105)	Popdc3 (MGP_SPRETEiJ_G0016106)	Bves (MGP_SPRETEiJ_G0016107)	Lin28b (MGP_SPRETEiJ_G0016108)	Hace1 (MGP_SPRETEiJ_G0016109)	Grik2 (MGP_SPRETEiJ_G0016110)
Ryukyu mouse	MODERN SPECIES	1	MGP_CAROLIEiJ_G0015271	MGP_CAROLIEiJ_G0015272	MGP_CAROLIEiJ_G0015273	Cep57l1 (MGP_CAROLIEiJ_G0015274)	Sesn1 (MGP_CAROLIEiJ_G0015275)	Armc2 (MGP_CAROLIEiJ_G0015276)	Foxo3 (MGP_CAROLIEiJ_G0015277)	Afg1l (MGP_CAROLIEiJ_G0015278)	Snx3 (MGP_CAROLIEiJ_G0015279)	Nr2e1 (MGP_CAROLIEiJ_G0015280)	Ostm1 (MGP_CAROLIEiJ_G0015281)	Sec63 (MGP_CAROLIEiJ_G0015282)	Scml4 (MGP_CAROLIEiJ_G0015283)	Sobp (MGP_CAROLIEiJ_G0015284)	MGP_CAROLIEiJ_G0015285	Pdss2 (MGP_CAROLIEiJ_G0015286) #22	Bend3 (MGP_CAROLIEiJ_G0015287) #23	Mtres1 (MGP_CAROLIEiJ_G0015288) #24	MGP_CAROLIEiJ_G0015289	MGP_CAROLIEiJ_G0015290	Qrsl1 (MGP_CAROLIEiJ_G0015291)	Rtn4ip1 (MGP_CAROLIEiJ_G0015292)	Crybg1 (MGP_CAROLIEiJ_G0015293)	Atg5 (MGP_CAROLIEiJ_G0015294)	Prdm1 (MGP_CAROLIEiJ_G0015295)	Prep (MGP_CAROLIEiJ_G0015296)	Popdc3 (MGP_CAROLIEiJ_G0015297)	Bves (MGP_CAROLIEiJ_G0015298)	Lin28b (MGP_CAROLIEiJ_G0015299)	Hace1 (MGP_CAROLIEiJ_G0015300)	Grik2 (MGP_CAROLIEiJ_G0015301)
Shrew mouse	MODERN SPECIES	22	MGP_PahariEiJ_G0030689	MGP_PahariEiJ_G0030690	MGP_PahariEiJ_G0030691	Cep57l1 (MGP_PahariEiJ_G0030692)	Sesn1 (MGP_PahariEiJ_G0030693)	Armc2 (MGP_PahariEiJ_G0030694)	Foxo3 (MGP_PahariEiJ_G0030695)	Afg1l (MGP_PahariEiJ_G0030696)	Snx3 (MGP_PahariEiJ_G0030697)	Nr2e1 (MGP_PahariEiJ_G0030698)	Ostm1 (MGP_PahariEiJ_G0030699)	Sec63 (MGP_PahariEiJ_G0030700)	Scml4 (MGP_PahariEiJ_G0030701)	Sobp (MGP_PahariEiJ_G0030702)	MGP_PahariEiJ_G0030703	Pdss2 (MGP_PahariEiJ_G0030704) #22	Bend3 (MGP_PahariEiJ_G0030705) #23	Mtres1 (MGP_PahariEiJ_G0030706) #24	MGP_PahariEiJ_G0030707	Qrsl1 (MGP_PahariEiJ_G0030708)	Rtn4ip1 (MGP_PahariEiJ_G0030709)	Crybg1 (MGP_PahariEiJ_G0030710)	Atg5 (MGP_PahariEiJ_G0030711)	Prdm1 (MGP_PahariEiJ_G0030712)	Prep (MGP_PahariEiJ_G0030713)	Popdc3 (MGP_PahariEiJ_G0030714)	Bves (MGP_PahariEiJ_G0030715)	Lin28b (MGP_PahariEiJ_G0030716)	Hace1 (MGP_PahariEiJ_G0030717)	Grik2 (MGP_PahariEiJ_G0030718)	Ascc3 (MGP_PahariEiJ_G0030719)
Rat	MODERN SPECIES	12	Cep57l1 (ENSRNOG00000000303)	Sesn1 (ENSRNOG00000000302)	LOC499469 (ENSRNOG00000049990)	Armc2 (ENSRNOG00000026217)	Foxo3 (ENSRNOG00000000299)	Afg1l (ENSRNOG00000043033)	Snx3 (ENSRNOG00000046705)	Nr2e1 (ENSRNOG00000050550)	Ostm1 (ENSRNOG00000037647)	ENSRNOG00000062845	Sec63 (ENSRNOG00000000314)	Scml4 (ENSRNOG00000026110)	ENSRNOG00000069773	Sobp (ENSRNOG00000000316)	LOC688390 (ENSRNOG00000026080)	Pdss2 (ENSRNOG00000042962) #22	Rpl37a-ps5 (ENSRNOG00000032964)	Bend3 (ENSRNOG00000046505) #23	Mtres1 (ENSRNOG00000047118) #24	AABR07045462.1 (ENSRNOG00000000320)	Cd24 (ENSRNOG00000000321)	Qrsl1 (ENSRNOG00000026049)	Rtn4ip1 (ENSRNOG00000000279)	Crybg1 (ENSRNOG00000025998)	AABR07045487.1 (ENSRNOG00000037628)	Atg5 (ENSRNOG00000000322)	Prdm1 (ENSRNOG00000000323)	Prep (ENSRNOG00000051061)	Popdc3 (ENSRNOG00000047102)	Bves (ENSRNOG00000043199)	Lin28b (ENSRNOG00000025938)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1522									Afg1l (ENSNGAG00000004401)	Snx3 (ENSNGAG00000023818)	Nr2e1 (ENSNGAG00000021311)	Ostm1 (ENSNGAG00000024096)	ENSNGAG00000022978	Scml4 (ENSNGAG00000021906)	Sobp (ENSNGAG00000001438)	Pdss2 (ENSNGAG00000022824) #22	Bend3 (ENSNGAG00000021369) #23	Mtres1 (ENSNGAG00000015067) #24	ENSNGAG00000022212	ENSNGAG00000022687	Qrsl1 (ENSNGAG00000023213)	Rtn4ip1 (ENSNGAG00000022333)	Crybg1 (ENSNGAG00000010488)	Atg5 (ENSNGAG00000017886)	Prdm1 (ENSNGAG00000022787)	Prep (ENSNGAG00000024271)	Popdc3 (ENSNGAG00000024046)	Bves (ENSNGAG00000024027)	Lin28b (ENSNGAG00000022808)	Hace1 (ENSNGAG00000017799)
Primates	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.z	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Tarsier	MODERN SPECIES	7120														SCML4 (ENSTSYG00000008656)	ENSTSYG00000034950	PDSS2 (ENSTSYG00000004161) #22
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.d #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.d #24	ENSGT00390000018829.y.a.a	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Marmoset	MODERN SPECIES	16	CEP57L1 (ENSCJAG00000005825)	SESN1 (ENSCJAG00000005880)	ARMC2 (ENSCJAG00000005915)	ENSCJAG00000005929	AFG1L (ENSCJAG00000045868)	SNX3 (ENSCJAG00000005955)	NR2E1 (ENSCJAG00000005966)	ENSCJAG00000059326	ENSCJAG00000070984	OSTM1 (ENSCJAG00000040617)	SEC63 (ENSCJAG00000005998)	SCML4 (ENSCJAG00000006102)	SOBP (ENSCJAG00000006119)	ENSCJAG00000084385	ENSCJAG00000076519	PDSS2 (ENSCJAG00000006153) #22	ENSCJAG00000080202	BEND3 (ENSCJAG00000039628) #23	MTRES1 (ENSCJAG00000046921) #24	ENSCJAG00000073856	ENSCJAG00000058620	QRSL1 (ENSCJAG00000006200)	RTN4IP1 (ENSCJAG00000006218)	ENSCJAG00000079990	CRYBG1 (ENSCJAG00000006246)	ENSCJAG00000074624	PRDM1 (ENSCJAG00000006332)	ENSCJAG00000079207	ATG5 (ENSCJAG00000006306)	ENSCJAG00000085831	ENSCJAG00000074740
Cebidae_a	ANCESTRAL SPECIES	88	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.e.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.d #24	ENSGT00390000018829.y.a.a	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Bolivian squirrel monkey	MODERN SPECIES	121	SESN1 (ENSSBOG00000034887)	ARMC2 (ENSSBOG00000034359)	ENSSBOG00000025905	ENSSBOG00000026053	AFG1L (ENSSBOG00000032088)	SNX3 (ENSSBOG00000028606)	NR2E1 (ENSSBOG00000027068)	ENSSBOG00000019719	OSTM1 (ENSSBOG00000018033)	ENSSBOG00000035021	SEC63 (ENSSBOG00000020518)	ENSSBOG00000022627	SCML4 (ENSSBOG00000023263)	ENSSBOG00000012379	SOBP (ENSSBOG00000031278)	PDSS2 (ENSSBOG00000021644) #22	ENSSBOG00000029782 #23	MTRES1 (ENSSBOG00000020668) #24	ENSSBOG00000034823	ENSSBOG00000032630	QRSL1 (ENSSBOG00000022441)	RTN4IP1 (ENSSBOG00000027877)	CRYBG1 (ENSSBOG00000033025)	ATG5 (ENSSBOG00000031707)	PRDM1 (ENSSBOG00000023139)	ENSSBOG00000024567	POPDC3 (ENSSBOG00000025829)	BVES (ENSSBOG00000024089)	LIN28B (ENSSBOG00000025323)	HACE1 (ENSSBOG00000024126)	NTNG2 (ENSSBOG00000030323)
Capuchin	MODERN SPECIES	160							FOXO3 (ENSCCAG00000030927)	AFG1L (ENSCCAG00000022433)	ENSCCAG00000033758	ENSCCAG00000022069	NR2E1 (ENSCCAG00000034016)	OSTM1 (ENSCCAG00000025943)	SEC63 (ENSCCAG00000024413)	SCML4 (ENSCCAG00000033652)	SOBP (ENSCCAG00000036289)	PDSS2 (ENSCCAG00000036171) #22	BEND3 (ENSCCAG00000032949) #23	CD24 (ENSCCAG00000034871)	QRSL1 (ENSCCAG00000021243)	RTN4IP1 (ENSCCAG00000015806)	CRYBG1 (ENSCCAG00000022546)	ATG5 (ENSCCAG00000022296)	PRDM1 (ENSCCAG00000031062)	PREP (ENSCCAG00000033502)	POPDC3 (ENSCCAG00000036176)	BVES (ENSCCAG00000027637)	LIN28B (ENSCCAG00000020904)	HACE1 (ENSCCAG00000028892)
Mas night monkey	MODERN SPECIES	478	ENSANAG00000036298	CEP57L1 (ENSANAG00000031702)	SESN1 (ENSANAG00000026899)	ARMC2 (ENSANAG00000027283)	ENSANAG00000023931	AFG1L (ENSANAG00000033061)	SNX3 (ENSANAG00000028701)	ENSANAG00000030536	NR2E1 (ENSANAG00000020325)	ENSANAG00000037950	ENSANAG00000019987	SEC63 (ENSANAG00000022108)	SCML4 (ENSANAG00000021645)	ENSANAG00000025986	SOBP (ENSANAG00000034007)	PDSS2 (ENSANAG00000015555) #22	BEND3 (ENSANAG00000021126) #23	ENSANAG00000037315 #24	ENSANAG00000036990	ENSANAG00000037838	ENSANAG00000003965	RTN4IP1 (ENSANAG00000037479)	CRYBG1 (ENSANAG00000023839)	ENSANAG00000027713	ATG5 (ENSANAG00000022796)	PRDM1 (ENSANAG00000030675)	ENSANAG00000024327	ENSANAG00000015673	POPDC3 (ENSANAG00000026735)	BVES (ENSANAG00000015115)	ENSANAG00000036677
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.y.b	ENSGT00550000074866.i	ENSGT00880000138028.b.b.a	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Hominidae	ANCESTRAL SPECIES	5	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.y.b	ENSGT00550000074866.i	ENSGT00880000138028.b.b.a	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00510000046986.n.a.a.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.y.b	ENSGT00550000074866.i	ENSGT00880000138028.b.b.a	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Gorilla	MODERN SPECIES	19	SESN1 (ENSGGOG00000008196)	ENSGGOG00000024963	ARMC2 (ENSGGOG00000008179)	ENSGGOG00000043953	ENSGGOG00000040628	ENSGGOG00000003517	AFG1L (ENSGGOG00000004244)	SNX3 (ENSGGOG00000043438)	NR2E1 (ENSGGOG00000038410)	ENSGGOG00000041051	OSTM1 (ENSGGOG00000009031)	ENSGGOG00000026319	SEC63 (ENSGGOG00000002560)	SCML4 (ENSGGOG00000006782)	SOBP (ENSGGOG00000015284)	PDSS2 (ENSGGOG00000040827) #22	BEND3 (ENSGGOG00000005456) #23	MTRES1 (ENSGGOG00000006113) #24	QRSL1 (ENSGGOG00000008261)	RTN4IP1 (ENSGGOG00000008254)	CRYBG1 (ENSGGOG00000016733)	PRDM1 (ENSGGOG00000001929)	ATG5 (ENSGGOG00000016633)	PREP (ENSGGOG00000017196)	POPDC3 (ENSGGOG00000017179)	BVES (ENSGGOG00000026505)	LIN28B (ENSGGOG00000015437)	HACE1 (ENSGGOG00000008591)	ENSGGOG00000043856	GRIK2 (ENSGGOG00000000114)	ASCC3 (ENSGGOG00000002790)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00510000046986.n.a.a.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.y.b	ENSGT00550000074866.i	ENSGT00880000138028.b.b.a	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Pan	ANCESTRAL SPECIES	5	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00510000046986.n.a.a.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00940000167536	ENSGT00550000074866.i	ENSGT00880000138028.b.b.a	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Chimpanzee	MODERN SPECIES	19	CEP57L1 (ENSPTRG00000018480)	SESN1 (ENSPTRG00000018479)	ENSPTRG00000045969	ARMC2 (ENSPTRG00000018477)	ENSPTRG00000052234	ENSPTRG00000045358	FOXO3 (ENSPTRG00000018476)	AFG1L (ENSPTRG00000018474)	SNX3 (ENSPTRG00000018473)	NR2E1 (ENSPTRG00000018472)	OSTM1 (ENSPTRG00000018471)	ENSPTRG00000049504	SEC63 (ENSPTRG00000018470)	SCML4 (ENSPTRG00000018469)	SOBP (ENSPTRG00000018467)	PDSS2 (ENSPTRG00000018466) #22	BEND3 (ENSPTRG00000018465) #23	MTRES1 (ENSPTRG00000018464) #24	ENSPTRG00000042685	QRSL1 (ENSPTRG00000018462)	RTN4IP1 (ENSPTRG00000018461)	CRYBG1 (ENSPTRG00000018459)	PRDM1 (ENSPTRG00000018457)	ATG5 (ENSPTRG00000018458)	PREP (ENSPTRG00000018456)	POPDC3 (ENSPTRG00000018455)	BVES (ENSPTRG00000018454)	LIN28B (ENSPTRG00000018453)	HACE1 (ENSPTRG00000018451)	GRIK2 (ENSPTRG00000018449)	ENSPTRG00000047929
Bonobo	MODERN SPECIES	19	CEP57L1 (ENSPPAG00000042916)	SESN1 (ENSPPAG00000041767)	ENSPPAG00000011766	ARMC2 (ENSPPAG00000029392)	ENSPPAG00000031267	ENSPPAG00000037969	ENSPPAG00000000536	AFG1L (ENSPPAG00000019727)	SNX3 (ENSPPAG00000032382)	NR2E1 (ENSPPAG00000038954)	OSTM1 (ENSPPAG00000043416)	ENSPPAG00000033502	SEC63 (ENSPPAG00000011744)	SCML4 (ENSPPAG00000020145)	SOBP (ENSPPAG00000037988)	PDSS2 (ENSPPAG00000035956) #22	BEND3 (ENSPPAG00000039227) #23	MTRES1 (ENSPPAG00000032445) #24	ENSPPAG00000028244	QRSL1 (ENSPPAG00000030790)	RTN4IP1 (ENSPPAG00000031639)	CRYBG1 (ENSPPAG00000030684)	ATG5 (ENSPPAG00000040499)	PRDM1 (ENSPPAG00000025287)	PREP (ENSPPAG00000014953)	POPDC3 (ENSPPAG00000031101)	BVES (ENSPPAG00000036836)	LIN28B (ENSPPAG00000038725)	HACE1 (ENSPPAG00000043105)	GRIK2 (ENSPPAG00000037072)	ASCC3 (ENSPPAG00000030772)
Human	MODERN SPECIES	18	MICAL1 (ENSG00000135596)	SMPD2 (ENSG00000135587)	PPIL6 (ENSG00000185250)	CD164 (ENSG00000135535)	CEP57L1 (ENSG00000183137)	SESN1 (ENSG00000080546)	ARMC2 (ENSG00000118690)	FOXO3 (ENSG00000118689)	AFG1L (ENSG00000135537)	SNX3 (ENSG00000112335)	NR2E1 (ENSG00000112333)	OSTM1 (ENSG00000081087)	SEC63 (ENSG00000025796)	SCML4 (ENSG00000146285)	SOBP (ENSG00000112320)	PDSS2 (ENSG00000164494) #22	BEND3 (ENSG00000178409) #23	MTRES1 (ENSG00000130349) #24	CD24 (ENSG00000272398)	QRSL1 (ENSG00000130348)	RTN4IP1 (ENSG00000130347)	CRYBG1 (ENSG00000112297)	ATG5 (ENSG00000057663)	PRDM1 (ENSG00000057657)	PREP (ENSG00000085377)	POPDC3 (ENSG00000132429)	BVES (ENSG00000112276)	LIN28B (ENSG00000187772)	HACE1 (ENSG00000085382)	GRIK2 (ENSG00000164418)	ASCC3 (ENSG00000112249)
Orangutan	MODERN SPECIES	19	ENSPPYG00000016907	CD164 (ENSPPYG00000016906)	CEP57L1 (ENSPPYG00000016901)	SESN1 (ENSPPYG00000016900)	ARMC2 (ENSPPYG00000016899)	ENSPPYG00000016897	ENSPPYG00000016896	AFG1L (ENSPPYG00000016895)	SNX3 (ENSPPYG00000016894)	NR2E1 (ENSPPYG00000016893)	OSTM1 (ENSPPYG00000016892)	ENSPPYG00000031910	SEC63 (ENSPPYG00000016891)	SCML4 (ENSPPYG00000016890)	SOBP (ENSPPYG00000016889)	PDSS2 (ENSPPYG00000016887) #22	BEND3 (ENSPPYG00000016886) #23	MTRES1 (ENSPPYG00000016885) #24	CD24 (ENSPPYG00000016884)	ENSPPYG00000016334	QRSL1 (ENSPPYG00000016883)	RTN4IP1 (ENSPPYG00000016882)	CRYBG1 (ENSPPYG00000016881)	PRDM1 (ENSPPYG00000016879)	ATG5 (ENSPPYG00000016880)	PREP (ENSPPYG00000029726)	POPDC3 (ENSPPYG00000016878)	BVES (ENSPPYG00000016876)	LIN28B (ENSPPYG00000031457)	HACE1 (ENSPPYG00000016873)	GRIK2 (ENSPPYG00000016870)
Gibbon	MODERN SPECIES	18	PPIL6 (ENSNLEG00000012561)	CD164 (ENSNLEG00000012527)	ENSNLEG00000012520	CEP57L1 (ENSNLEG00000012502)	SESN1 (ENSNLEG00000012476)	ARMC2 (ENSNLEG00000012451)	ENSNLEG00000012446	AFG1L (ENSNLEG00000013680)	SNX3 (ENSNLEG00000033323)	NR2E1 (ENSNLEG00000013646)	OSTM1 (ENSNLEG00000013621)	SEC63 (ENSNLEG00000013526)	SCML4 (ENSNLEG00000013516)	ENSNLEG00000027102	SOBP (ENSNLEG00000013498)	PDSS2 (ENSNLEG00000013484) #22	BEND3 (ENSNLEG00000013464) #23	MTRES1 (ENSNLEG00000013450) #24	QRSL1 (ENSNLEG00000013383)	RTN4IP1 (ENSNLEG00000013349)	CRYBG1 (ENSNLEG00000013318)	PRDM1 (ENSNLEG00000013211)	ATG5 (ENSNLEG00000013268)	PREP (ENSNLEG00000014171)	POPDC3 (ENSNLEG00000014163)	BVES (ENSNLEG00000014155)	LIN28B (ENSNLEG00000014146)	HACE1 (ENSNLEG00000014061)	GRIK2 (ENSNLEG00000013983)	ENSNLEG00000013981	ASCC3 (ENSNLEG00000013890)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000155616.c.a.f	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b	ENSGT00390000015164.l	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00550000074968.b	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000160715	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b.a	ENSGT00390000015164.l	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00550000074968.b	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Pig-tailed macaque	MODERN SPECIES	553	SYNJ2 (ENSMNEG00000017211)	SERAC1 (ENSMNEG00000041761)	GTF2H5 (ENSMNEG00000036678)	ENSMNEG00000038872	TULP4 (ENSMNEG00000036789)	ENSMNEG00000038298	TMEM181 (ENSMNEG00000028961)	DYNLT1 (ENSMNEG00000036826)	SYTL3 (ENSMNEG00000043100)	EZR (ENSMNEG00000039070)	ENSMNEG00000028772	ENSMNEG00000035124	SEC63 (ENSMNEG00000037461)	SCML4 (ENSMNEG00000036341)	SOBP (ENSMNEG00000037530)	PDSS2 (ENSMNEG00000027986) #22	BEND3 (ENSMNEG00000036299) #23	ENSMNEG00000028746 #24	ENSMNEG00000034018	ENSMNEG00000043762	ENSMNEG00000039721	QRSL1 (ENSMNEG00000039617)	RTN4IP1 (ENSMNEG00000045014)	CRYBG1 (ENSMNEG00000033538)	ATG5 (ENSMNEG00000032866)	PRDM1 (ENSMNEG00000032369)	ENSMNEG00000045422	PREP (ENSMNEG00000043839)	POPDC3 (ENSMNEG00000014319)	BVES (ENSMNEG00000033730)	LIN28B (ENSMNEG00000038148)
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000156483	ENSGT00940000156557	ENSGT00940000160715	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913	ENSGT00390000007183	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b.a	ENSGT00390000015164.l	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a #24	ENSGT00390000018829.z	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Crab-eating macaque	MODERN SPECIES	14	SYNJ2 (ENSMFAG00000040552)	SERAC1 (ENSMFAG00000042904)	GTF2H5 (ENSMFAG00000037102)	TULP4 (ENSMFAG00000002792)	TMEM181 (ENSMFAG00000003593)	DYNLT1 (ENSMFAG00000033424)	SYTL3 (ENSMFAG00000001875)	ENSMFAG00000063938	EZR (ENSMFAG00000002822)	ENSMFAG00000034442	ENSMFAG00000041251	SEC63 (ENSMFAG00000034177)	ENSMFAG00000047785	SCML4 (ENSMFAG00000000713)	SOBP (ENSMFAG00000031853)	PDSS2 (ENSMFAG00000031137) #22	BEND3 (ENSMFAG00000043850) #23	ENSMFAG00000034144 #24	ENSMFAG00000064133	ENSMFAG00000037584	RTN4IP1 (ENSMFAG00000045409)	CRYBG1 (ENSMFAG00000038353)	ENSMFAG00000051465	ATG5 (ENSMFAG00000041362)	PRDM1 (ENSMFAG00000037637)	PREP (ENSMFAG00000038505)	POPDC3 (ENSMFAG00000040532)	BVES (ENSMFAG00000045432)	LIN28B (ENSMFAG00000065717)	HACE1 (ENSMFAG00000039999)	ENSMFAG00000052218
Rhesus	MODERN SPECIES	14	ARID1B (ENSMMUG00000002270)	TMEM242 (ENSMMUG00000052641)	ZDHHC14 (ENSMMUG00000015872)	SNX9 (ENSMMUG00000007142)	SYNJ2 (ENSMMUG00000007153)	SERAC1 (ENSMMUG00000029510)	GTF2H5 (ENSMMUG00000049294)	TULP4 (ENSMMUG00000019448)	TMEM181 (ENSMMUG00000019450)	DYNLT1 (ENSMMUG00000019454)	SYTL3 (ENSMMUG00000058074)	EZR (ENSMMUG00000019457)	SEC63 (ENSMMUG00000016598)	SCML4 (ENSMMUG00000014936)	SOBP (ENSMMUG00000022950)	PDSS2 (ENSMMUG00000002271) #22	BEND3 (ENSMMUG00000052231) #23	MTRES1 (ENSMMUG00000050334) #24	ENSMMUG00000056792	QRSL1 (ENSMMUG00000008330)	RTN4IP1 (ENSMMUG00000008121)	CRYBG1 (ENSMMUG00000008120)	ATG5 (ENSMMUG00000019679)	PRDM1 (ENSMMUG00000021401)	PREP (ENSMMUG00000013483)	POPDC3 (ENSMMUG00000014473)	BVES (ENSMMUG00000014471)	LIN28B (ENSMMUG00000064609)	HACE1 (ENSMMUG00000014703)	ENSMMUG00000055978	GRIK2 (ENSMMUG00000009856)
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000155616.c.a.f	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b	ENSGT00390000015164.l	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a #24	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00550000074968.b	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Olive baboon	MODERN SPECIES	16	ZDHHC14 (ENSPANG00000007490)	SNX9 (ENSPANG00000008674)	SYNJ2 (ENSPANG00000010755)	SERAC1 (ENSPANG00000019055)	GTF2H5 (ENSPANG00000039941)	TULP4 (ENSPANG00000022014)	TMEM181 (ENSPANG00000018078)	DYNLT1 (ENSPANG00000021141)	SYTL3 (ENSPANG00000011916)	EZR (ENSPANG00000016175)	ENSPANG00000034964	ENSPANG00000043729	SEC63 (ENSPANG00000004976)	SCML4 (ENSPANG00000017725)	SOBP (ENSPANG00000021646)	PDSS2 (ENSPANG00000017550) #22	BEND3 (ENSPANG00000024031) #23	MTRES1 (ENSPANG00000025271) #24	ENSPANG00000037991	ENSPANG00000040240	ENSPANG00000049765	ENSPANG00000041919	ENSPANG00000044349	QRSL1 (ENSPANG00000016880)	RTN4IP1 (ENSPANG00000008266)	CRYBG1 (ENSPANG00000021647)	PRDM1 (ENSPANG00000050119)	ATG5 (ENSPANG00000025450)	ENSPANG00000046918	PREP (ENSPANG00000015134)	POPDC3 (ENSPANG00000010757)
Cercopithecinae_d	ANCESTRAL SPECIES	35	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000155616.c.a.f	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b	ENSGT00390000015164.l	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a #24	ENSGT00940000167536	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00550000074866.i	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00550000074968.b	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b
Drill	MODERN SPECIES	1200										ENSMLEG00000030698	ENSMLEG00000016056	ENSMLEG00000035536	ENSMLEG00000023103	ENSMLEG00000033113	ENSMLEG00000032648	PDSS2 (ENSMLEG00000043220) #22	BEND3 (ENSMLEG00000028839) #23	ENSMLEG00000034658	ENSMLEG00000021892	QRSL1 (ENSMLEG00000039233)	RTN4IP1 (ENSMLEG00000033710)
Sooty mangabey	MODERN SPECIES	139	SYNJ2 (ENSCATG00000042943)	SERAC1 (ENSCATG00000040610)	GTF2H5 (ENSCATG00000044459)	ENSCATG00000045359	TULP4 (ENSCATG00000030922)	ENSCATG00000016948	TMEM181 (ENSCATG00000037574)	ENSCATG00000041684	DYNLT1 (ENSCATG00000042124)	SYTL3 (ENSCATG00000033317)	EZR (ENSCATG00000030432)	ENSCATG00000020673	SEC63 (ENSCATG00000041502)	SCML4 (ENSCATG00000031314)	SOBP (ENSCATG00000045250)	PDSS2 (ENSCATG00000045083) #22	BEND3 (ENSCATG00000044885) #23	ENSCATG00000000450 #24	ENSCATG00000030902	ENSCATG00000031493	ENSCATG00000041315	QRSL1 (ENSCATG00000041686)	RTN4IP1 (ENSCATG00000045221)	CRYBG1 (ENSCATG00000030957)	ATG5 (ENSCATG00000032926)	PRDM1 (ENSCATG00000029610)	ENSCATG00000003731	PREP (ENSCATG00000029835)	POPDC3 (ENSCATG00000018981)	BVES (ENSCATG00000037642)	LIN28B (ENSCATG00000037900)
Vervet Monkey	MODERN SPECIES	4	PPIL6 (ENSCSAG00000015318)	CD164 (ENSCSAG00000015315)	ENSCSAG00000015288	CEP57L1 (ENSCSAG00000015274)	SESN1 (ENSCSAG00000015254)	ARMC2 (ENSCSAG00000015188)	ENSCSAG00000015174	AFG1L (ENSCSAG00000015166)	SNX3 (ENSCSAG00000015156)	NR2E1 (ENSCSAG00000015143)	OSTM1 (ENSCSAG00000015115)	SEC63 (ENSCSAG00000015043)	SCML4 (ENSCSAG00000014941)	SOBP (ENSCSAG00000014908)	ENSCSAG00000014888	PDSS2 (ENSCSAG00000014881) #22	BEND3 (ENSCSAG00000014875) #23	MTRES1 (ENSCSAG00000014865) #24	QRSL1 (ENSCSAG00000014852)	RTN4IP1 (ENSCSAG00000014845)	CRYBG1 (ENSCSAG00000014817)	ENSCSAG00000014764	ATG5 (ENSCSAG00000014751)	PRDM1 (ENSCSAG00000014744)	PREP (ENSCSAG00000014741)	POPDC3 (ENSCSAG00000014725)	BVES (ENSCSAG00000014711)	LIN28B (ENSCSAG00000014708)	HACE1 (ENSCSAG00000014704)	ENSCSAG00000014695	ENSCSAG00000018976
Rhinopithecus	ANCESTRAL SPECIES	282	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00910000147202	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	669																ENSRBIG00000034899 #22
Black snub-nosed monkey	MODERN SPECIES	611	PPIL6 (ENSRBIG00000039141)	CD164 (ENSRBIG00000017887)	ENSRBIG00000029996	CEP57L1 (ENSRBIG00000032920)	SESN1 (ENSRBIG00000044534)	ARMC2 (ENSRBIG00000039423)	ENSRBIG00000041006	AFG1L (ENSRBIG00000043286)	SNX3 (ENSRBIG00000036801)	NR2E1 (ENSRBIG00000032455)	OSTM1 (ENSRBIG00000033044)	SEC63 (ENSRBIG00000029238)	SCML4 (ENSRBIG00000042673)	ENSRBIG00000027620	ENSRBIG00000017827	ENSRBIG00000044333 #22
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1189																ENSRROG00000041554 #22
Golden snub-nosed monkey	MODERN SPECIES	2360			ENSRROG00000000604	SESN1 (ENSRROG00000039007)	ARMC2 (ENSRROG00000038321)	ENSRROG00000015070	ENSRROG00000028438	AFG1L (ENSRROG00000028996)	SNX3 (ENSRROG00000037899)	NR2E1 (ENSRROG00000044660)	OSTM1 (ENSRROG00000029748)	SEC63 (ENSRROG00000035523)	SCML4 (ENSRROG00000027116)	ENSRROG00000024279	SOBP (ENSRROG00000039171)	ENSRROG00000033386 #22
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b.f	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Bushbaby	MODERN SPECIES	117	SMPD2 (ENSOGAG00000015505)	CD164 (ENSOGAG00000015500)	ENSOGAG00000015493	ENSOGAG00000015488	ENSOGAG00000015479	SESN1 (ENSOGAG00000015235)	ARMC2 (ENSOGAG00000010324)	ENSOGAG00000027196	ENSOGAG00000004119	SNX3 (ENSOGAG00000012282)	NR2E1 (ENSOGAG00000011992)	OSTM1 (ENSOGAG00000015357)	SEC63 (ENSOGAG00000015346)	SCML4 (ENSOGAG00000006345)	SOBP (ENSOGAG00000006342)	PDSS2 (ENSOGAG00000006339) #22	BEND3 (ENSOGAG00000027957) #23	MTRES1 (ENSOGAG00000008839) #24	ENSOGAG00000024102	QRSL1 (ENSOGAG00000012707)	RTN4IP1 (ENSOGAG00000012703)	ENSOGAG00000012697	ENSOGAG00000032847	ATG5 (ENSOGAG00000004787)	PRDM1 (ENSOGAG00000014036)	PREP (ENSOGAG00000015233)	POPDC3 (ENSOGAG00000011048)	BVES (ENSOGAG00000011044)	ENSOGAG00000029797	LIN28B (ENSOGAG00000011042)	HACE1 (ENSOGAG00000011034)
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b.f	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.ab	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Lemuriformes_a	ANCESTRAL SPECIES	63	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b.f	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.ab	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Coquerels sifaka	MODERN SPECIES	492	SMPD2 (ENSPCOG00000001714)	PPIL6 (ENSPCOG00000016101)	CD164 (ENSPCOG00000028678)	CEP57L1 (ENSPCOG00000020909)	SESN1 (ENSPCOG00000023817)	ARMC2 (ENSPCOG00000027583)	ENSPCOG00000024701	ENSPCOG00000018259	AFG1L (ENSPCOG00000014543)	SNX3 (ENSPCOG00000020531)	NR2E1 (ENSPCOG00000019521)	OSTM1 (ENSPCOG00000025401)	SEC63 (ENSPCOG00000021091)	SCML4 (ENSPCOG00000022920)	SOBP (ENSPCOG00000025980)	PDSS2 (ENSPCOG00000005947) #22	BEND3 (ENSPCOG00000017387) #23	ENSPCOG00000027220 #24	CD24 (ENSPCOG00000014613)	ENSPCOG00000019397	RTN4IP1 (ENSPCOG00000027386)	ENSPCOG00000025469	CRYBG1 (ENSPCOG00000022574)	PRDM1 (ENSPCOG00000002322)	ATG5 (ENSPCOG00000015617)	PREP (ENSPCOG00000018527)	POPDC3 (ENSPCOG00000022458)	BVES (ENSPCOG00000023354)	LIN28B (ENSPCOG00000016875)	HACE1 (ENSPCOG00000016340)	ENSPCOG00000020641
Greater bamboo lemur	MODERN SPECIES	187						ENSPSMG00000002940	ARMC2 (ENSPSMG00000002952)	ENSPSMG00000002963	AFG1L (ENSPSMG00000002975)	ENSPSMG00000002992	NR2E1 (ENSPSMG00000003030)	OSTM1 (ENSPSMG00000003042)	SEC63 (ENSPSMG00000003081)	SCML4 (ENSPSMG00000003119)	SOBP (ENSPSMG00000003137)	PDSS2 (ENSPSMG00000003161) #22	ENSPSMG00000003169	BEND3 (ENSPSMG00000003180) #23	MTRES1 (ENSPSMG00000003201) #24	ENSPSMG00000003206	QRSL1 (ENSPSMG00000003285)	RTN4IP1 (ENSPSMG00000003357)	CRYBG1 (ENSPSMG00000003403)	ENSPSMG00000003411	ATG5 (ENSPSMG00000003484)	PRDM1 (ENSPSMG00000003598)	PREP (ENSPSMG00000003663)	POPDC3 (ENSPSMG00000003691)	BVES (ENSPSMG00000003702)	LIN28B (ENSPSMG00000003723)	HACE1 (ENSPSMG00000003828)
Mouse lemur	MODERN SPECIES	28	PPIL6 (ENSMICG00000014430)	CD164 (ENSMICG00000014422)	ENSMICG00000014404	CEP57L1 (ENSMICG00000014373)	SESN1 (ENSMICG00000038030)	ENSMICG00000042143	ENSMICG00000035769	AFG1L (ENSMICG00000014294)	ENSMICG00000004669	SNX3 (ENSMICG00000043331)	NR2E1 (ENSMICG00000014274)	OSTM1 (ENSMICG00000027511)	SEC63 (ENSMICG00000014221)	SCML4 (ENSMICG00000004168)	SOBP (ENSMICG00000030144)	PDSS2 (ENSMICG00000032777) #22	BEND3 (ENSMICG00000043137) #23	ENSMICG00000004137 #24	ENSMICG00000011517	ENSMICG00000029426	QRSL1 (ENSMICG00000015754)	RTN4IP1 (ENSMICG00000015741)	CRYBG1 (ENSMICG00000030885)	ATG5 (ENSMICG00000010334)	PRDM1 (ENSMICG00000010329)	PREP (ENSMICG00000000906)	POPDC3 (ENSMICG00000045084)	BVES (ENSMICG00000041560)	LIN28B (ENSMICG00000047923)	HACE1 (ENSMICG00000002280)	ENSMICG00000046073
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00390000002042	ENSGT00390000007445	ENSGT00940000165946	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153498.B.b #22
Hedgehog	MODERN SPECIES	1459																PDSS2 (ENSEEUG00000003290) #22
Common shrew	MODERN SPECIES	4509																PDSS2 (ENSSARG00000008131) #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000165946	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Carnivora	ANCESTRAL SPECIES	4	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000164355	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Felidae	ANCESTRAL SPECIES	5	ENSGT01090000260200	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000153305.c.e.a	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.y.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00550000074820.g.b.b	ENSGT00940000153096.b.c.b.a.a.c.a	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010020	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Panthera	ANCESTRAL SPECIES	7	ENSGT01090000260200	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000153305.c.e.a	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.y.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00550000074820.g.b.b	ENSGT00940000153096.b.c.b.a.a.c.a	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Tiger	MODERN SPECIES	120	CEP57L1 (ENSPTIG00000010364)	ENSPTIG00000006465	SESN1 (ENSPTIG00000010634)	ARMC2 (ENSPTIG00000010930)	ENSPTIG00000010993	ENSPTIG00000006470	AFG1L (ENSPTIG00000011075)	SNX3 (ENSPTIG00000011144)	NR2E1 (ENSPTIG00000011245)	OSTM1 (ENSPTIG00000011589)	ENSPTIG00000011769	ENSPTIG00000006485	SEC63 (ENSPTIG00000011850)	SCML4 (ENSPTIG00000012438)	ENSPTIG00000012569	PDSS2 (ENSPTIG00000012627) #22	BEND3 (ENSPTIG00000012683) #23	MTRES1 (ENSPTIG00000012699) #24	CD24 (ENSPTIG00000012956)
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000163170	ENSGT01090000260200	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000153305.c.e.a	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.y.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00550000074820.g.b.b	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
leopard	MODERN SPECIES	8	CD164 (ENSPPRG00000002917)	ENSPPRG00000006527	CEP57L1 (ENSPPRG00000011525)	SESN1 (ENSPPRG00000012293)	ARMC2 (ENSPPRG00000012871)	ENSPPRG00000013820	ENSPPRG00000015115	AFG1L (ENSPPRG00000015710)	SNX3 (ENSPPRG00000017937)	NR2E1 (ENSPPRG00000022189)	OSTM1 (ENSPPRG00000023255)	ENSPPRG00000022699	SEC63 (ENSPPRG00000001303)	SCML4 (ENSPPRG00000003028)	SOBP (ENSPPRG00000003897)	PDSS2 (ENSPPRG00000005402) #22	BEND3 (ENSPPRG00000006060) #23	MTRES1 (ENSPPRG00000006302) #24	ENSPPRG00000006560	CD24 (ENSPPRG00000006861)	QRSL1 (ENSPPRG00000008093)	RTN4IP1 (ENSPPRG00000009483)	CRYBG1 (ENSPPRG00000010238)	ATG5 (ENSPPRG00000012874)	PRDM1 (ENSPPRG00000011148)	PREP (ENSPPRG00000013298)	POPDC3 (ENSPPRG00000013616)	BVES (ENSPPRG00000015358)	LIN28B (ENSPPRG00000016158)	HACE1 (ENSPPRG00000021923)	ENSPPRG00000001508
lion	MODERN SPECIES	5	ENSPLOG00000001764	ENSPLOG00000001710	CEP57L1 (ENSPLOG00000001647)	SESN1 (ENSPLOG00000001551)	ARMC2 (ENSPLOG00000001510)	ENSPLOG00000001495	ENSPLOG00000001485	AFG1L (ENSPLOG00000001460)	ENSPLOG00000001431	NR2E1 (ENSPLOG00000001392)	OSTM1 (ENSPLOG00000001361)	ENSPLOG00000001352	SEC63 (ENSPLOG00000001298)	SCML4 (ENSPLOG00000001239)	SOBP (ENSPLOG00000001199)	PDSS2 (ENSPLOG00000001162) #22	ENSPLOG00000001144	BEND3 (ENSPLOG00000001134) #23	MTRES1 (ENSPLOG00000001114) #24	CD24 (ENSPLOG00000001102)	QRSL1 (ENSPLOG00000001072)	RTN4IP1 (ENSPLOG00000001021)	ENSPLOG00000000998	CRYBG1 (ENSPLOG00000000953)	ATG5 (ENSPLOG00000000881)	PRDM1 (ENSPLOG00000000820)	PREP (ENSPLOG00000000781)	POPDC3 (ENSPLOG00000000761)	BVES (ENSPLOG00000000733)	ENSPLOG00000000717	LIN28B (ENSPLOG00000000691)
Cat	MODERN SPECIES	236	ENSFCAG00000042749	CEP57L1 (ENSFCAG00000026443)	SESN1 (ENSFCAG00000031995)	ARMC2 (ENSFCAG00000018743)	ENSFCAG00000029035	FOXO3 (ENSFCAG00000030227)	AFG1L (ENSFCAG00000003437)	ENSFCAG00000024997	NR2E1 (ENSFCAG00000002255)	ENSFCAG00000032904	OSTM1 (ENSFCAG00000024755)	ENSFCAG00000024634	SEC63 (ENSFCAG00000002253)	SCML4 (ENSFCAG00000003739)	SOBP (ENSFCAG00000028431)	PDSS2 (ENSFCAG00000024608) #22	ENSFCAG00000051054	BEND3 (ENSFCAG00000008869) #23	MTRES1 (ENSFCAG00000046698) #24	ENSFCAG00000032455	QRSL1 (ENSFCAG00000005096)	RTN4IP1 (ENSFCAG00000030660)	ENSFCAG00000053486	CRYBG1 (ENSFCAG00000005094)	ATG5 (ENSFCAG00000031909)	PRDM1 (ENSFCAG00000010755)	PREP (ENSFCAG00000005061)	POPDC3 (ENSFCAG00000005060)	BVES (ENSFCAG00000005059)	LIN28B (ENSFCAG00000044308)	HACE1 (ENSFCAG00000022001)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000164355	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000164355	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Mustelinae	ANCESTRAL SPECIES	26	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000164355	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Ferret	MODERN SPECIES	201	SESN1 (ENSMPUG00000009860)	ARMC2 (ENSMPUG00000009852)	ENSMPUG00000009848	ENSMPUG00000009847	AFG1L (ENSMPUG00000009823)	ENSMPUG00000009816	SNX3 (ENSMPUG00000009812)	NR2E1 (ENSMPUG00000009805)	OSTM1 (ENSMPUG00000009774)	ENSMPUG00000009757	SEC63 (ENSMPUG00000009752)	ENSMPUG00000009747	SCML4 (ENSMPUG00000009746)	SOBP (ENSMPUG00000009696)	ENSMPUG00000009693	PDSS2 (ENSMPUG00000009682) #22	BEND3 (ENSMPUG00000009678) #23	ENSMPUG00000019102	MTRES1 (ENSMPUG00000009672) #24	CD24 (ENSMPUG00000009669)	QRSL1 (ENSMPUG00000009661)	RTN4IP1 (ENSMPUG00000009654)	CRYBG1 (ENSMPUG00000009543)	ATG5 (ENSMPUG00000009534)	PRDM1 (ENSMPUG00000009522)	PREP (ENSMPUG00000009513)	POPDC3 (ENSMPUG00000009505)	BVES (ENSMPUG00000009502)	LIN28B (ENSMPUG00000009489)	ENSMPUG00000009481	ENSMPUG00000009479
American mink	MODERN SPECIES	4	CEP57L1 (ENSNVIG00000004602)	SESN1 (ENSNVIG00000004555)	ARMC2 (ENSNVIG00000004503)	ENSNVIG00000004489	ENSNVIG00000004481	LACE1 (ENSNVIG00000004442)	SNX3 (ENSNVIG00000004406)	NR2E1 (ENSNVIG00000004390)	OSTM1 (ENSNVIG00000004375)	ENSNVIG00000004361	SEC63 (ENSNVIG00000004305)	ENSNVIG00000004288	ENSNVIG00000004283	SOBP (ENSNVIG00000004254)	ENSNVIG00000004244	PDSS2 (ENSNVIG00000004192) #22	BEND3 (ENSNVIG00000004176) #23	MTRES1 (ENSNVIG00000004157) #24	ENSNVIG00000004145	QRSL1 (ENSNVIG00000004081)	RTN4IP1 (ENSNVIG00000004067)	ENSNVIG00000004058	CRYBG1 (ENSNVIG00000003998)	ATG5 (ENSNVIG00000003945)	PRDM1 (ENSNVIG00000003863)	PREP (ENSNVIG00000003825)	POPD3 (ENSNVIG00000003813)	POPD1 (ENSNVIG00000003747)	LIN28B (ENSNVIG00000003725)	HACE1 (ENSNVIG00000003630)	ENSNVIG00000003598
Ursidae	ANCESTRAL SPECIES	22	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.y.a	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Giant Panda	MODERN SPECIES	1	PPIL6 (ENSAMEG00000016447)	CD164 (ENSAMEG00000016459)	ENSAMEG00000016463	CEP57L1 (ENSAMEG00000008220)	SESN1 (ENSAMEG00000008179)	ARMC2 (ENSAMEG00000008162)	ENSAMEG00000008158	AFG1L (ENSAMEG00000008150)	SNX3 (ENSAMEG00000008145)	NR2E1 (ENSAMEG00000008117)	OSTM1 (ENSAMEG00000008114)	SEC63 (ENSAMEG00000008074)	SCML4 (ENSAMEG00000008065)	SOBP (ENSAMEG00000008061)	ENSAMEG00000025863	PDSS2 (ENSAMEG00000008056) #22	BEND3 (ENSAMEG00000008053) #23	ENSAMEG00000023827	MTRES1 (ENSAMEG00000008052) #24	CD24 (ENSAMEG00000031404)	QRSL1 (ENSAMEG00000002571)	ENSAMEG00000029538	ENSAMEG00000024019	CRYBG1 (ENSAMEG00000001523)	PRDM1 (ENSAMEG00000001482)	ATG5 (ENSAMEG00000001503)	PREP (ENSAMEG00000011361)	POPDC3 (ENSAMEG00000011433)	BVES (ENSAMEG00000028861)	ENSAMEG00000026936	LIN28B (ENSAMEG00000011453)
Ursus	ANCESTRAL SPECIES	131											ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.y.a	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143	ENSGT00940000154272.A
Polar bear	MODERN SPECIES	268												ENSUMAG00000019838	SEC63 (ENSUMAG00000019843)	SCML4 (ENSUMAG00000019857)	SOBP (ENSUMAG00000019861)	PDSS2 (ENSUMAG00000019867) #22	MTRES1 (ENSUMAG00000019879) #24	QRSL1 (ENSUMAG00000019887)	RTN4IP1 (ENSUMAG00000019890)	CRYBG1 (ENSUMAG00000019920)	ATG5 (ENSUMAG00000020055)	PREP (ENSUMAG00000020265)	POPDC3 (ENSUMAG00000020909)	BVES (ENSUMAG00000020912)	LIN28B (ENSUMAG00000020916)	ENSUMAG00000020919	HACE1 (ENSUMAG00000020920)	GRIK2 (ENSUMAG00000020951)	ENSUMAG00000021158	ASCC3 (ENSUMAG00000021200)	SIM1 (ENSUMAG00000021405)
Canidae	ANCESTRAL SPECIES	6	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.w.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.y.a	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a.d	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Red fox	MODERN SPECIES	54	CD164 (ENSVVUG00000004986)	ENSVVUG00000004923	CEP57L1 (ENSVVUG00000004884)	SESN1 (ENSVVUG00000004879)	ARMC2 (ENSVVUG00000004847)	ENSVVUG00000004833	AFG1L (ENSVVUG00000004813)	ENSVVUG00000004798	ENSVVUG00000004795	OSTM1 (ENSVVUG00000004771)	SEC63 (ENSVVUG00000004763)	ENSVVUG00000004750	ENSVVUG00000004745	ENSVVUG00000004735	SOBP (ENSVVUG00000004706)	PDSS2 (ENSVVUG00000004658) #22	ENSVVUG00000004652	BEND3 (ENSVVUG00000004649) #23	ENSVVUG00000004648 #24	QRSL1 (ENSVVUG00000004637)	RTN4IP1 (ENSVVUG00000004632)	CRYBG1 (ENSVVUG00000004496)	ATG5 (ENSVVUG00000004478)	PRDM1 (ENSVVUG00000004465)	PREP (ENSVVUG00000003825)	POPDC3 (ENSVVUG00000003775)	BVES (ENSVVUG00000003754)	LIN28B (ENSVVUG00000003739)	HACE1 (ENSVVUG00000003691)	ENSVVUG00000003658	ENSVVUG00000003647
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.w.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.y.a	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.f.a.d	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000154737.d
Dingo	MODERN SPECIES	370	PPIL6 (ENSCAFG00020017980)	ENSCAFG00020017976	ENSCAFG00020017941	CEP57L1 (ENSCAFG00020017933)	SESN1 (ENSCAFG00020017928)	ARMC2 (ENSCAFG00020017910)	ENSCAFG00020017905	AFG1L (ENSCAFG00020017899)	ENSCAFG00020017882	NR2E1 (ENSCAFG00020017858)	OSTM1 (ENSCAFG00020017831)	SEC63 (ENSCAFG00020017827)	ENSCAFG00020017824	ENSCAFG00020017819	SOBP (ENSCAFG00020017814)	PDSS2 (ENSCAFG00020017808) #22	BEND3 (ENSCAFG00020017802) #23	MTRES1 (ENSCAFG00020017801) #24	QRSL1 (ENSCAFG00020017795)	RTN4IP1 (ENSCAFG00020017789)	ENSCAFG00020017786	CRYBG1 (ENSCAFG00020017663)	ATG5 (ENSCAFG00020017640)	PRDM1 (ENSCAFG00020017630)	PREP (ENSCAFG00020017616)	POPDC3 (ENSCAFG00020017612)	BVES (ENSCAFG00020017609)	LIN28B (ENSCAFG00020017606)	HACE1 (ENSCAFG00020017333)	ENSCAFG00020017311	ENSCAFG00020017309
Dog	MODERN SPECIES	3	PPIL6 (ENSCAFG00845010913)	CD164 (ENSCAFG00845010838)	ENSCAFG00845010542	CEP57L1 (ENSCAFG00845010196)	SESN1 (ENSCAFG00845009981)	ARMC2 (ENSCAFG00845009746)	FOXO3 (ENSCAFG00845009586)	ENSCAFG00845009536	AFG1L (ENSCAFG00845009423)	SNX3 (ENSCAFG00845009178)	NR2E1 (ENSCAFG00845008978)	OSTM1 (ENSCAFG00845008927)	SEC63 (ENSCAFG00845008872)	SCML4 (ENSCAFG00845008805)	SOBP (ENSCAFG00845008693)	PDSS2 (ENSCAFG00845008531) #22	BEND3 (ENSCAFG00845008452) #23	ENSCAFG00845008420	MTRES1 (ENSCAFG00845008387) #24	ENSCAFG00845008352	QRSL1 (ENSCAFG00845008279)	RTN4IP1 (ENSCAFG00845008205)	CRYBG1 (ENSCAFG00845008056)	ATG5 (ENSCAFG00845007954)	PRDM1 (ENSCAFG00845007842)	PREP (ENSCAFG00845007652)	POPDC3 (ENSCAFG00845007572)	BVES (ENSCAFG00845007542)	LIN28B (ENSCAFG00845007472)	HACE1 (ENSCAFG00845006967)	ENSCAFG00845006846
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Equus	ANCESTRAL SPECIES	29	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000165946	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.a	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366 #24	ENSGT00390000018829.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Horse	MODERN SPECIES	1	CD164 (ENSECAG00000031619)	ENSECAG00000013532	CEP57L1 (ENSECAG00000009776)	SESN1 (ENSECAG00000001101)	ARMC2 (ENSECAG00000024506)	FOXO3 (ENSECAG00000024499)	AFG1L (ENSECAG00000023503)	SNX3 (ENSECAG00000022664)	NR2E1 (ENSECAG00000018990)	OSTM1 (ENSECAG00000016887)	SEC63 (ENSECAG00000006392)	ENSECAG00000046423	SCML4 (ENSECAG00000024152)	SOBP (ENSECAG00000036081)	ENSECAG00000052219	PDSS2 (ENSECAG00000024085) #22	BEND3 (ENSECAG00000023993) #23	ENSECAG00000047274	MTRES1 (ENSECAG00000023985) #24	ENSECAG00000031607	QRSL1 (ENSECAG00000021023)	RTN4IP1 (ENSECAG00000019289)	ATG5 (ENSECAG00000013971)	CRYBG1 (ENSECAG00000015079)	PRDM1 (ENSECAG00000009044)	ENSECAG00000053373	PREP (ENSECAG00000023502)	POPDC3 (ENSECAG00000021367)	BVES (ENSECAG00000038417)	LIN28B (ENSECAG00000020994)	HACE1 (ENSECAG00000015445)
Donkey	MODERN SPECIES	16	PPIL6 (ENSEASG00005033540)	CD164 (ENSEASG00005006477)	ENSEASG00005006467	CEP57L1 (ENSEASG00005006465)	SESN1 (ENSEASG00005006463)	ARMC2 (ENSEASG00005006460)	ENSEASG00005006457	AFG1L (ENSEASG00005006455)	SNX3 (ENSEASG00005027377)	NR2E1 (ENSEASG00005006452)	OSTM1 (ENSEASG00005006451)	SEC63 (ENSEASG00005006449)	SCML4 (ENSEASG00005006447)	ENSEASG00005028878	SOBP (ENSEASG00005006446)	PDSS2 (ENSEASG00005006444) #22	BEND3 (ENSEASG00005037754) #23	ENSEASG00005029634	MTRES1 (ENSEASG00005006440) #24	ENSEASG00005006439	QRSL1 (ENSEASG00005006438)	RTN4IP1 (ENSEASG00005006435)	CRYBG1 (ENSEASG00005006430)	ATG5 (ENSEASG00005006428)	PRDM1 (ENSEASG00005006427)	ENSEASG00005033880	PREP (ENSEASG00005006425)	POPDC3 (ENSEASG00005006424)	BVES (ENSEASG00005006423)	LIN28B (ENSEASG00005026575)	HACE1 (ENSEASG00005006421)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Megabat	MODERN SPECIES	2810													SEC63 (ENSPVAG00000004446)	SCML4 (ENSPVAG00000004445)	SOBP (ENSPVAG00000004444)	PDSS2 (ENSPVAG00000004443) #22	BEND3 (ENSPVAG00000004442) #23	MTRES1 (ENSPVAG00000004438) #24	ENSPVAG00000004436
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Microbat	MODERN SPECIES	1153										NR2E1 (ENSMLUG00000005543)	OSTM1 (ENSMLUG00000005540)	ENSMLUG00000030351	SEC63 (ENSMLUG00000005529)	SCML4 (ENSMLUG00000005526)	SOBP (ENSMLUG00000029995)	PDSS2 (ENSMLUG00000002328) #22	BEND3 (ENSMLUG00000002324) #23	ENSMLUG00000002326	MTRES1 (ENSMLUG00000009524) #24	QRSL1 (ENSMLUG00000025602)	RTN4IP1 (ENSMLUG00000002947)	CRYBG1 (ENSMLUG00000002929)	ATG5 (ENSMLUG00000014090)	PRDM1 (ENSMLUG00000014085)
Greater horseshoe bat	MODERN SPECIES	21	SMPD2 (ENSRFEG00010012782)	PPIL6 (ENSRFEG00010012502)	CD164 (ENSRFEG00010012454)	ENSRFEG00010012005	CEP57L1 (ENSRFEG00010011653)	SESN1 (ENSRFEG00010011576)	ARMC2 (ENSRFEG00010011463)	ENSRFEG00010011401	AFG1L (ENSRFEG00010011287)	SNX3 (ENSRFEG00010011106)	NR2E1 (ENSRFEG00010010957)	OSTM1 (ENSRFEG00010010906)	SEC63 (ENSRFEG00010010840)	SCML4 (ENSRFEG00010010598)	SOBP (ENSRFEG00010010519)	PDSS2 (ENSRFEG00010010408) #22	BEND3 (ENSRFEG00010010319) #23	MTRES1 (ENSRFEG00010003814) #24	ENSRFEG00010003796	QRSL1 (ENSRFEG00010003777)	CRYBG1 (ENSRFEG00010003739)	ENSRFEG00010003711	RTN4IP1 (ENSRFEG00010003684)	PRDM1 (ENSRFEG00010003594)	ATG5 (ENSRFEG00010003510)	PREP (ENSRFEG00010003440)	POPDC3 (ENSRFEG00010003422)	BVES (ENSRFEG00010003402)	LIN28B (ENSRFEG00010003383)	HACE1 (ENSRFEG00010003307)	ENSRFEG00010003252
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00950000186448	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Suina	ANCESTRAL SPECIES	18	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Pig	MODERN SPECIES		CEP57L1 (ENSSSCG00000004391)	ENSSSCG00000004389	ENSSSCG00000052903	SESN1 (ENSSSCG00000004390)	ARMC2 (ENSSSCG00000004388)	ENSSSCG00000004387	AFG1L (ENSSSCG00000040199)	SNX3 (ENSSSCG00000004385)	NR2E1 (ENSSSCG00000004384)	OSTM1 (ENSSSCG00000004383)	SEC63 (ENSSSCG00000004382)	ENSSSCG00000059436	SCML4 (ENSSSCG00000033392)	SOBP (ENSSSCG00000004379)	ENSSSCG00000043730	PDSS2 (ENSSSCG00000036168) #22	BEND3 (ENSSSCG00000031159) #23	MTRES1 (ENSSSCG00000037985) #24	ENSSSCG00000037071	CD24 (ENSSSCG00000056379)	QRSL1 (ENSSSCG00000004374)	RTN4IP1 (ENSSSCG00000004373)	ENSSSCG00000041504	ENSSSCG00000046528	CRYBG1 (ENSSSCG00000004371)	PRDM1 (ENSSSCG00000004369)	ATG5 (ENSSSCG00000004370)	PREP (ENSSSCG00000004368)	ENSSSCG00000045756	POPDC3 (ENSSSCG00000004367)	BVES (ENSSSCG00000004366)
Chacoan peccary	MODERN SPECIES	61	PPIL6 (ENSCWAG00000006750)	CD164 (ENSCWAG00000006667)	ENSCWAG00000006462	CEP57L1 (ENSCWAG00000005725)	SESN1 (ENSCWAG00000005592)	ARMC2 (ENSCWAG00000005470)	ENSCWAG00000005437	ENSCWAG00000005422	AFG1L (ENSCWAG00000005377)	SNX3 (ENSCWAG00000005325)	NR2E1 (ENSCWAG00000005279)	OSTM1 (ENSCWAG00000005241)	SEC63 (ENSCWAG00000005214)	SCML4 (ENSCWAG00000005085)	SOBP (ENSCWAG00000005052)	PDSS2 (ENSCWAG00000004925) #22	BEND3 (ENSCWAG00000004892) #23	MTRES1 (ENSCWAG00000004864) #24	ENSCWAG00000004851	QRSL1 (ENSCWAG00000019699)	RTN4IP1 (ENSCWAG00000019680)	CRYBG1 (ENSCWAG00000019206)	PRDM1 (ENSCWAG00000019085)	ATG5 (ENSCWAG00000018963)	PREP (ENSCWAG00000018924)	POPDC3 (ENSCWAG00000018902)	BVES (ENSCWAG00000018883)	LIN28B (ENSCWAG00000018839)	HACE1 (ENSCWAG00000018801)	GRIK2 (ENSCWAG00000017386)	ASCC3 (ENSCWAG00000017256)
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00410000028929	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Camelidae	ANCESTRAL SPECIES	26	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00410000028929	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Arabian camel	MODERN SPECIES	34	PPIL6 (ENSCDRG00005007281)	ENSCDRG00005007462	ENSCDRG00005007597	CEP57L1 (ENSCDRG00005007702)	SESN1 (ENSCDRG00005008310)	ARMC2 (ENSCDRG00005008518)	ENSCDRG00005008590	ENSCDRG00005008617	AFG1L (ENSCDRG00005008669)	SNX3 (ENSCDRG00005008756)	NR2E1 (ENSCDRG00005008907)	OSTM1 (ENSCDRG00005009034)	SEC63 (ENSCDRG00005009103)	SCML4 (ENSCDRG00005009375)	ENSCDRG00005009503	PDSS2 (ENSCDRG00005009549) #22	BEND3 (ENSCDRG00005009651) #23	MTRES1 (ENSCDRG00005009712) #24	ENSCDRG00005009820	QRSL1 (ENSCDRG00005009875)	RTN4IP1 (ENSCDRG00005009990)	ENSCDRG00005010087	ATG5 (ENSCDRG00005010191)	PRDM1 (ENSCDRG00005010476)	PREP (ENSCDRG00005010990)	POPDC3 (ENSCDRG00005011183)	BVES (ENSCDRG00005011229)	LIN28B (ENSCDRG00005011271)	HACE1 (ENSCDRG00005011438)	ENSCDRG00005011925	GRIK2 (ENSCDRG00005012001)
Alpaca	MODERN SPECIES	912												SEC63 (ENSVPAG00000011376)	SCML4 (ENSVPAG00000011375)	SOBP (ENSVPAG00000011373)	ENSVPAG00000011372	PDSS2 (ENSVPAG00000011371) #22	BEND3 (ENSVPAG00000011370) #23	MTRES1 (ENSVPAG00000011369) #24	ENSVPAG00000011368	QRSL1 (ENSVPAG00000011367)	RTN4IP1 (ENSVPAG00000011366)	CRYBG1 (ENSVPAG00000011365)	ATG5 (ENSVPAG00000011364)	PRDM1 (ENSVPAG00000011363)
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00410000028929	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Pecora	ANCESTRAL SPECIES	19	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT01030000236423
Yarkand deer	MODERN SPECIES	20	ENSCHYG00000017708	CD164 (ENSCHYG00000017778)	CEP57L1 (ENSCHYG00000018844)	SESN1 (ENSCHYG00000019343)	ARMC2 (ENSCHYG00000019746)	ENSCHYG00000019977	AFG1L (ENSCHYG00000020011)	SNX3 (ENSCHYG00000020227)	NR2E1 (ENSCHYG00000020431)	ENSCHYG00000020616	ENSCHYG00000020693	OSTM1 (ENSCHYG00000020769)	SEC63 (ENSCHYG00000020896)	SCML4 (ENSCHYG00000021381)	SOBP (ENSCHYG00000021447)	PDSS2 (ENSCHYG00000021575) #22	ENSCHYG00000021717	BEND3 (ENSCHYG00000021757) #23	MTRES1 (ENSCHYG00000021800) #24	ENSCHYG00000021838	QRSL1 (ENSCHYG00000021880)	RTN4IP1 (ENSCHYG00000021960)	CRYBG1 (ENSCHYG00000022057)	ATG5 (ENSCHYG00000022719)	PRDM1 (ENSCHYG00000022882)	PREP (ENSCHYG00000023040)	ENSCHYG00000023289	POPDC3 (ENSCHYG00000023314)	BVES (ENSCHYG00000023334)	LIN28B (ENSCHYG00000023383)	HACE1 (ENSCHYG00000023545)
Percora_a	ANCESTRAL SPECIES	21	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT01010000228077	ENSGT00940000153295.b	ENSGT00940000155839
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00940000158886.g.b	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT01010000228077	ENSGT00940000153295.b	ENSGT00940000155839
Bovinae	ANCESTRAL SPECIES	31	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00390000005569.x.a.b.b.b	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00940000158886.g.b	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00960000190646	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00390000004856.w.a.a.b.b.a.b.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b
Bos	ANCESTRAL SPECIES	19	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00390000005569.x.a.b.b.b	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00940000158886.g.b	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00950000186448	ENSGT00960000190646	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00390000004856.w.a.a.b.b.a.b.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b
Bos_b	ANCESTRAL SPECIES	24	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00390000005569.x.a.b.b.b	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00940000158886.g.b	ENSGT00390000012341	ENSGT00390000013102.e.b	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.a	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b.e	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT01100000263481.n.a.a.a.a.a.b.b.b	ENSGT01030000236423
Hybrid Bos Indicus	MODERN SPECIES	28	ARMC2 (ENSBIXG00005008081)	ENSBIXG00005008024	ENSBIXG00005008006	AFG1L (ENSBIXG00005007990)	ENSBIXG00005007977	SNX3 (ENSBIXG00005007963)	ENSBIXG00005007943	NR2E1 (ENSBIXG00005007933)	ENSBIXG00005000025	OSTM1 (ENSBIXG00005007909)	ENSBIXG00005007898	SEC63 (ENSBIXG00005007877)	SCML4 (ENSBIXG00005029296)	ENSBIXG00005029333	SOBP (ENSBIXG00005029342)	PDSS2 (ENSBIXG00005029375) #22	BEND3 (ENSBIXG00005029403) #23	MTRES1 (ENSBIXG00005029440) #24	ENSBIXG00005029470	ENSBIXG00005029500	ENSBIXG00005029552	CRYBG1 (ENSBIXG00005029620)	ATG5 (ENSBIXG00005029723)	PRDM1 (ENSBIXG00005029779)	ENSBIXG00005029830	ENSBIXG00005029840	PREP (ENSBIXG00005029865)	POPDC3 (ENSBIXG00005029917)	BVES (ENSBIXG00005029927)	ENSBIXG00005029941	LIN28B (ENSBIXG00005029958)
Cow	MODERN SPECIES	28	CEP57L1 (ENSBTAG00000019410)	SESN1 (ENSBTAG00000003015)	ARMC2 (ENSBTAG00000036087)	FOXO3 (ENSBTAG00000011234)	AFG1L (ENSBTAG00000014592)	ENSBTAG00000045504	SNX3 (ENSBTAG00000018801)	NR2E1 (ENSBTAG00000013991)	ENSBTAG00000010148	OSTM1 (ENSBTAG00000010134)	ENSBTAG00000023792	SEC63 (ENSBTAG00000016562)	SCML4 (ENSBTAG00000005699)	SOBP (ENSBTAG00000019175)	ENSBTAG00000052829	PDSS2 (ENSBTAG00000021859) #22	BEND3 (ENSBTAG00000012534) #23	MTRES1 (ENSBTAG00000021398) #24	ENSBTAG00000052465	QRSL1 (ENSBTAG00000017557)	RTN4IP1 (ENSBTAG00000017554)	CRYBG1 (ENSBTAG00000017527)	ENSBTAG00000052057	ATG5 (ENSBTAG00000005400)	PRDM1 (ENSBTAG00000000816)	PREP (ENSBTAG00000016281)	POPDC3 (ENSBTAG00000046017)	BVES (ENSBTAG00000018790)	LIN28B (ENSBTAG00000043973)	HACE1 (ENSBTAG00000001533)	ENSBTAG00000051738
Bos_a	ANCESTRAL SPECIES	18	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00390000005569.x.a.b.b.b	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00940000158886.g.b	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00390000004856.w.a.a.b.b.a.b.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Domestic yak	MODERN SPECIES	1	CD164 (ENSBGRG00000008478)	ENSBGRG00000008378	CEP57L1 (ENSBGRG00000008020)	SESN1 (ENSBGRG00000007696)	ARMC2 (ENSBGRG00000007272)	ENSBGRG00000007174	AFG1L (ENSBGRG00000007086)	ENSBGRG00000007070	ENSBGRG00000006976	NR2E1 (ENSBGRG00000006910)	ENSBGRG00000006887	OSTM1 (ENSBGRG00000006844)	SEC63 (ENSBGRG00000006724)	SCML4 (ENSBGRG00000006677)	SOBP (ENSBGRG00000006590)	PDSS2 (ENSBGRG00000006508) #22	ENSBGRG00000006478	MTRES1 (ENSBGRG00000006439) #24	ENSBGRG00000006411	ENSBGRG00000006389	ENSBGRG00000006311	QRSL1 (ENSBGRG00000006270)	ENSBGRG00000006262	RTN4IP1 (ENSBGRG00000006146)	CRYBG1 (ENSBGRG00000005685)	ATG5 (ENSBGRG00000005379)	PRDM1 (ENSBGRG00000005178)	ENSBGRG00000005152	ENSBGRG00000005146	ENSBGRG00000005140	PREP (ENSBGRG00000005031)
Wild yak	MODERN SPECIES	972						ENSBMUG00000010221	ENSBMUG00000010234	SNX3 (ENSBMUG00000010256)	NR2E1 (ENSBMUG00000010262)	ENSBMUG00000010280	OSTM1 (ENSBMUG00000010287)	ENSBMUG00000010297	SEC63 (ENSBMUG00000010331)	SCML4 (ENSBMUG00000010375)	SOBP (ENSBMUG00000010395)	PDSS2 (ENSBMUG00000010415) #22	BEND3 (ENSBMUG00000010421) #23	MTRES1 (ENSBMUG00000010433) #24	CD24 (ENSBMUG00000010442)	ENSBMUG00000010451	QRSL1 (ENSBMUG00000010508)	RTN4IP1 (ENSBMUG00000010550)	CRYBG1 (ENSBMUG00000010584)	ENSBMUG00000010608	ENSBMUG00000010621
American bison	MODERN SPECIES	3287	CEP57L1 (ENSBBBG00000001939)	SESN1 (ENSBBBG00000001906)	ARMC2 (ENSBBBG00000001902)	ENSBBBG00000010823	AFG1L (ENSBBBG00000009042)	ENSBBBG00000001898	SNX3 (ENSBBBG00000010797)	NR2E1 (ENSBBBG00000010790)	ENSBBBG00000010783	OSTM1 (ENSBBBG00000010779)	ENSBBBG00000010776	SEC63 (ENSBBBG00000010770)	SCML4 (ENSBBBG00000001886)	ENSBBBG00000001880	ENSBBBG00000010739	PDSS2 (ENSBBBG00000010733) #22	BEND3 (ENSBBBG00000001878) #23	MTRES1 (ENSBBBG00000001874) #24	ENSBBBG00000010715	ENSBBBG00000010700	ENSBBBG00000010682	RTN4IP1 (ENSBBBG00000001868)	CRYBG1 (ENSBBBG00000010653)	ENSBBBG00000010639	ENSBBBG00000010638	ATG5 (ENSBBBG00000010625)	PRDM1 (ENSBBBG00000010598)	ENSBBBG00000001852	PREP (ENSBBBG00000010572)	ENSBBBG00000001850	POPDC3 (ENSBBBG00000007299)
Caprinae	ANCESTRAL SPECIES	33	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00940000158886.g.b	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463.z	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.b	ENSGT00550000074866.c	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00900000143654	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT01010000228077	ENSGT00940000153295.b	ENSGT00940000155839
Rambouillet Sheep	MODERN SPECIES	24	SMPD2 (ENSOARG00020008673)	PPIL6 (ENSOARG00020008709)	CD164 (ENSOARG00020008950)	ENSOARG00020009174	CEP57L1 (ENSOARG00020009709)	SESN1 (ENSOARG00020009820)	ARMC2 (ENSOARG00020009986)	FOXO3 (ENSOARG00020010382)	AFG1L (ENSOARG00020010438)	SNX3 (ENSOARG00020010555)	NR2E1 (ENSOARG00020010722)	OSTM1 (ENSOARG00020010926)	SEC63 (ENSOARG00020011009)	SCML4 (ENSOARG00020011208)	SOBP (ENSOARG00020011474)	PDSS2 (ENSOARG00020011577) #22	BEND3 (ENSOARG00020011619) #23	MTRES1 (ENSOARG00020011697) #24	CD24 (ENSOARG00020011839)	QRSL1 (ENSOARG00020011934)	RTN4IP1 (ENSOARG00020012231)	CRYBG1 (ENSOARG00020012867)	ENSOARG00020013506	ATG5 (ENSOARG00020013575)	PRDM1 (ENSOARG00020013852)	CYCS (ENSOARG00020014198)	ENSOARG00020014217	PREP (ENSOARG00020014297)	POPDC3 (ENSOARG00020014545)	BVES (ENSOARG00020014598)	ENSOARG00020014675
Goat	MODERN SPECIES	28	PPIL6 (ENSCHIG00000003703)	CD164 (ENSCHIG00000021803)	ENSCHIG00000013583	CEP57L1 (ENSCHIG00000015261)	SESN1 (ENSCHIG00000017822)	ARMC2 (ENSCHIG00000014666)	ENSCHIG00000018293	AFG1L (ENSCHIG00000015722)	SNX3 (ENSCHIG00000003391)	NR2E1 (ENSCHIG00000020755)	ENSCHIG00000023983	OSTM1 (ENSCHIG00000017859)	SEC63 (ENSCHIG00000021240)	SCML4 (ENSCHIG00000010706)	SOBP (ENSCHIG00000007832)	PDSS2 (ENSCHIG00000015163) #22	BEND3 (ENSCHIG00000010728) #23	MTRES1 (ENSCHIG00000005527) #24	CD24 (ENSCHIG00000015151)	ENSCHIG00000017313	RTN4IP1 (ENSCHIG00000011362)	CRYBG1 (ENSCHIG00000020732)	ATG5 (ENSCHIG00000019684)	PRDM1 (ENSCHIG00000023368)	PREP (ENSCHIG00000019257)	POPDC3 (ENSCHIG00000016800)	BVES (ENSCHIG00000008491)	LIN28B (ENSCHIG00000011133)	ENSCHIG00000015439	HACE1 (ENSCHIG00000025754)	ENSCHIG00000025858
Siberian musk deer	MODERN SPECIES	57						ENSMMSG00000008937	AFG1L (ENSMMSG00000008965)	ENSMMSG00000009017	SNX3 (ENSMMSG00000009040)	NR2E1 (ENSMMSG00000009124)	ENSMMSG00000009182	OSTM1 (ENSMMSG00000009222)	SEC63 (ENSMMSG00000009260)	SCML4 (ENSMMSG00000009358)	SOBP (ENSMMSG00000009483)	PDSS2 (ENSMMSG00000009520) #22	ENSMMSG00000009562	BEND3 (ENSMMSG00000009582) #23	MTRES1 (ENSMMSG00000009604) #24	CD24 (ENSMMSG00000009656)	ENSMMSG00000009682	QRSL1 (ENSMMSG00000009700)	RTN4IP1 (ENSMMSG00000009752)	CRYBG1 (ENSMMSG00000009812)	ATG5 (ENSMMSG00000009989)	PRDM1 (ENSMMSG00000010156)	PREP (ENSMMSG00000010324)	POPDC3 (ENSMMSG00000010364)	BVES (ENSMMSG00000010405)	ENSMMSG00000010511	LIN28B (ENSMMSG00000010589)
Cetacea	ANCESTRAL SPECIES	18	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.`b.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT01000000221220	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000157463.y.b	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00940000158987.d	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00410000028929	ENSGT00390000002563.a	ENSGT00940000153295.b
Blue whale	MODERN SPECIES	3	PPIL6 (ENSBMSG00010013684)	CD164 (ENSBMSG00010013715)	ENSBMSG00010013794	CEP57L1 (ENSBMSG00010013852)	SESN1 (ENSBMSG00010013987)	ARMC2 (ENSBMSG00010014096)	ENSBMSG00010014211	AFG1L (ENSBMSG00010014237)	ENSBMSG00010014284	NR2E1 (ENSBMSG00010014344)	OSTM1 (ENSBMSG00010014401)	SEC63 (ENSBMSG00010014432)	ENSBMSG00010014487	SCML4 (ENSBMSG00010014504)	SOBP (ENSBMSG00010014588)	PDSS2 (ENSBMSG00010014650) #22	BEND3 (ENSBMSG00010014671) #23	MTRES1 (ENSBMSG00010014698) #24	ENSBMSG00010014725	ENSBMSG00010014752	QRSL1 (ENSBMSG00010014781)	RTN4IP1 (ENSBMSG00010014817)	CRYBG1 (ENSBMSG00010014861)	ENSBMSG00010014960	ATG5 (ENSBMSG00010015017)	ENSBMSG00010015168	PRDM1 (ENSBMSG00010015211)	ENSBMSG00010015421	PREP (ENSBMSG00010008712)	POPDC3 (ENSBMSG00010008729)	BVES (ENSBMSG00010008737)
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.`b.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT01000000221220	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00390000004040.k.b	ENSGT00940000154798.a.d.a	ENSGT00940000158987.d	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00410000028929	ENSGT00390000002563.a
Sperm whale	MODERN SPECIES	1	PPIL6 (ENSPCTG00005011484)	CD164 (ENSPCTG00005011679)	ENSPCTG00005012459	CEP57L1 (ENSPCTG00005012500)	SESN1 (ENSPCTG00005012751)	ARMC2 (ENSPCTG00005012871)	FOXO3 (ENSPCTG00005013073)	AFG1L (ENSPCTG00005013130)	SNX3 (ENSPCTG00005013214)	NR2E1 (ENSPCTG00005013389)	OSTM1 (ENSPCTG00005013539)	SEC63 (ENSPCTG00005013601)	ENSPCTG00005013758	ENSPCTG00005013782	SOBP (ENSPCTG00005013850)	PDSS2 (ENSPCTG00005013948) #22	BEND3 (ENSPCTG00005014036) #23	C10H6orf203 (ENSPCTG00005014085) #24	ENSPCTG00005014121	QRSL1 (ENSPCTG00005014148)	RTN4IP1 (ENSPCTG00005014223)	CRYBG1 (ENSPCTG00005014434)	ENSPCTG00005014468	ENSPCTG00005014481	ATG5 (ENSPCTG00005014542)	ENSPCTG00005014799	PRDM1 (ENSPCTG00005014867)	ENSPCTG00005015126	PREP (ENSPCTG00005015210)	POPDC3 (ENSPCTG00005015471)	BVES (ENSPCTG00005015536)
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.`b.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT01000000221220	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00940000158987.d	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00410000028929	ENSGT00390000002563.a	ENSGT00940000153295.b
Dolphin	MODERN SPECIES	2147																PDSS2 (ENSTTRG00000007418) #22	BEND3 (ENSTTRG00000007417) #23
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT01000000221721	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.`b.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT01000000221220	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829.g.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00940000158987.d	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Vaquita	MODERN SPECIES	3	ENSPSNG00000012029	CEP57L1 (ENSPSNG00000012071)	SESN1 (ENSPSNG00000012128)	ARMC2 (ENSPSNG00000012236)	ENSPSNG00000012269	ENSPSNG00000012289	AFG1L (ENSPSNG00000012339)	SNX3 (ENSPSNG00000012388)	NR2E1 (ENSPSNG00000012471)	OSTM1 (ENSPSNG00000012562)	ENSPSNG00000012614	SEC63 (ENSPSNG00000012696)	ENSPSNG00000012847	SCML4 (ENSPSNG00000012885)	SOBP (ENSPSNG00000013126)	PDSS2 (ENSPSNG00000013250) #22	ENSPSNG00000013296	BEND3 (ENSPSNG00000013346) #23	MTRES1 (ENSPSNG00000013378) #24	ENSPSNG00000013443	QRSL1 (ENSPSNG00000013527)	RTN4IP1 (ENSPSNG00000013614)	CRYBG1 (ENSPSNG00000013720)	ENSPSNG00000013855	ENSPSNG00000013913	ATG5 (ENSPSNG00000014006)	ENSPSNG00000014192	PRDM1 (ENSPSNG00000014233)	PREP (ENSPSNG00000014450)	POPDC3 (ENSPSNG00000014548)	BVES (ENSPSNG00000014643)
Monodontidae	ANCESTRAL SPECIES	18	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b.`b.a	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT01000000221220	ENSGT00940000157463.y.b	ENSGT00940000157463.z	ENSGT00950000186137	ENSGT00940000154164.c	ENSGT00390000012178.g.a.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.l.a #24	ENSGT00390000018829.g.a	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00900000143654	ENSGT00940000155695	ENSGT00390000004856.w.b	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00940000158987.d	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b
Beluga whale	MODERN SPECIES	80	SESN1 (ENSDLEG00000017985)	ARMC2 (ENSDLEG00000017871)	FOXO3 (ENSDLEG00000017844)	AFG1L (ENSDLEG00000017823)	SNX3 (ENSDLEG00000017815)	NR2E1 (ENSDLEG00000017794)	ENSDLEG00000017771	ENSDLEG00000017753	SEC63 (ENSDLEG00000017708)	ENSDLEG00000017689	ENSDLEG00000017674	SCML4 (ENSDLEG00000017668)	ENSDLEG00000017650	SOBP (ENSDLEG00000017615)	ENSDLEG00000017596	PDSS2 (ENSDLEG00000017583) #22	BEND3 (ENSDLEG00000017572) #23	CUNH6orf203 (ENSDLEG00000017561) #24	ENSDLEG00000017555	QRSL1 (ENSDLEG00000017520)	RTN4IP1 (ENSDLEG00000017504)	ENSDLEG00000017491	ENSDLEG00000017458	CRYBG1 (ENSDLEG00000017426)	ENSDLEG00000017411	ATG5 (ENSDLEG00000017390)	PRDM1 (ENSDLEG00000017371)	ENSDLEG00000017350	PREP (ENSDLEG00000017313)	POPDC3 (ENSDLEG00000017299)	BVES (ENSDLEG00000017267)
Narwhal	MODERN SPECIES	301	CEP57L1 (ENSMMNG00015011010)	SESN1 (ENSMMNG00015010978)	ARMC2 (ENSMMNG00015010951)	ENSMMNG00015010936	ENSMMNG00015010931	AFG1L (ENSMMNG00015010921)	SNX3 (ENSMMNG00015010894)	NR2E1 (ENSMMNG00015010867)	ENSMMNG00015010843	OSTM1 (ENSMMNG00015010828)	SEC63 (ENSMMNG00015010793)	ENSMMNG00015010768	SCML4 (ENSMMNG00015010744)	SOBP (ENSMMNG00015010729)	ENSMMNG00015010718	PDSS2 (ENSMMNG00015010632) #22	BEND3 (ENSMMNG00015010606) #23	ENSMMNG00015010593 #24	ENSMMNG00015010579	QRSL1 (ENSMMNG00015010552)	RTN4IP1 (ENSMMNG00015010517)	ENSMMNG00015010497	CRYBG1 (ENSMMNG00015010430)	ENSMMNG00015010395	ENSMMNG00015010386	PRDM1 (ENSMMNG00015010356)	ATG5 (ENSMMNG00015010296)	ENSMMNG00015010265	PREP (ENSMMNG00015010230)	POPDC3 (ENSMMNG00015010209)	BVES (ENSMMNG00015010194)
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000163170	ENSGT00940000165257	ENSGT00940000164734	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Afrotheria	ANCESTRAL SPECIES	13	ENSGT00530000063929.a.a	ENSGT00940000165257	ENSGT00940000164734	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Afrotheria_a	ANCESTRAL SPECIES	13	ENSGT00530000063929.a.a	ENSGT00940000165257	ENSGT00940000164734	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Elephant	MODERN SPECIES	1	CD164 (ENSLAFG00000003292)	ENSLAFG00000003291	ENSLAFG00000003290	ENSLAFG00000021442	CEP57L1 (ENSLAFG00000003209)	SESN1 (ENSLAFG00000021864)	ARMC2 (ENSLAFG00000005972)	ENSLAFG00000005834	AFG1L (ENSLAFG00000005829)	SNX3 (ENSLAFG00000018131)	NR2E1 (ENSLAFG00000013583)	OSTM1 (ENSLAFG00000000313)	SEC63 (ENSLAFG00000017896)	ENSLAFG00000013674	SOBP (ENSLAFG00000013670)	PDSS2 (ENSLAFG00000013247) #22	BEND3 (ENSLAFG00000005298) #23	MTRES1 (ENSLAFG00000005301) #24	CD24 (ENSLAFG00000007742)	QRSL1 (ENSLAFG00000012887)	RTN4IP1 (ENSLAFG00000006744)	ENSLAFG00000026098	ATG5 (ENSLAFG00000017057)	PRDM1 (ENSLAFG00000013436)	PREP (ENSLAFG00000006151)	POPDC3 (ENSLAFG00000018065)	BVES (ENSLAFG00000009474)	LIN28B (ENSLAFG00000017788)	HACE1 (ENSLAFG00000002989)	GRIK2 (ENSLAFG00000016101)	ASCC3 (ENSLAFG00000011363)
Hyrax	MODERN SPECIES	4779														SCML4 (ENSPCAG00000016440)	SOBP (ENSPCAG00000016388)	PDSS2 (ENSPCAG00000016350) #22
Tenrec	MODERN SPECIES	5658															SOBP (ENSETEG00000000438)	PDSS2 (ENSETEG00000000436) #22
Xenarthra	ANCESTRAL SPECIES	351																ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b
Sloth	MODERN SPECIES	5179																PDSS2 (ENSCHOG00000011631) #22
Armadillo	MODERN SPECIES	3892																PDSS2 (ENSDNOG00000000559) #22	BEND3 (ENSDNOG00000035050) #23	ENSDNOG00000014433 #24	QRSL1 (ENSDNOG00000006990)	RTN4IP1 (ENSDNOG00000006973)	CRYBG1 (ENSDNOG00000006946)	ENSDNOG00000046752	ATG5 (ENSDNOG00000013004)	PRDM1 (ENSDNOG00000044646)	PREP (ENSDNOG00000000259)	POPDC3 (ENSDNOG00000041457)	ENSDNOG00000033014	LIN28B (ENSDNOG00000015300)	ENSDNOG00000040003	HACE1 (ENSDNOG00000015667)	ENSDNOG00000032448
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Diprotodontia_a	ANCESTRAL SPECIES	23	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000018829	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
koala	MODERN SPECIES	127	SMPD2 (ENSPCIG00000005984)	PPIL6 (ENSPCIG00000005983)	ENSPCIG00000005982	CEP57L1 (ENSPCIG00000005962)	SESN1 (ENSPCIG00000005956)	ARMC2 (ENSPCIG00000002328)	ENSPCIG00000011521	AFG1L (ENSPCIG00000011135)	SNX3 (ENSPCIG00000011129)	NR2E1 (ENSPCIG00000011127)	OSTM1 (ENSPCIG00000011126)	SEC63 (ENSPCIG00000009133)	SCML4 (ENSPCIG00000037215)	ENSPCIG00000033617	ENSPCIG00000034417	PDSS2 (ENSPCIG00000020207) #22	BEND3 (ENSPCIG00000000335) #23	ENSPCIG00000000367 #24
Common wonbat	MODERN SPECIES	36	SMPD2 (ENSVURG00010010716)	PPIL6 (ENSVURG00010010703)	ENSVURG00010010695	ENSVURG00010010606	CEP57L1 (ENSVURG00010010540)	SESN1 (ENSVURG00010010516)	ARMC2 (ENSVURG00010010463)	ENSVURG00010010442	AFG1L (ENSVURG00010010424)	SNX3 (ENSVURG00010010386)	NR2E1 (ENSVURG00010010373)	OSTM1 (ENSVURG00010010362)	ENSVURG00010010352	SCML4 (ENSVURG00010010328)	SOBP (ENSVURG00010010312)	PDSS2 (ENSVURG00010010278) #22	BEND3 (ENSVURG00010010224) #23	MTRES1 (ENSVURG00010010203) #24	CD24 (ENSVURG00010010174)	QRSL1 (ENSVURG00010010151)	RTN4IP1 (ENSVURG00010010119)	ENSVURG00010010101	CRYBG1 (ENSVURG00010010054)	ATG5 (ENSVURG00010010025)	PRDM1 (ENSVURG00010010010)	PREP (ENSVURG00010009992)	POPDC3 (ENSVURG00010009979)	ENSVURG00010009977	BVES (ENSVURG00010009971)	LIN28B (ENSVURG00010009956)	HACE1 (ENSVURG00010009904)
Wallaby	MODERN SPECIES	7034																PDSS2 (ENSMEUG00000005839) #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000029619	ENSSHAG00000007042	ENSSHAG00000032351	ENSSHAG00000021796	CEP57L1 (ENSSHAG00000005029)	SESN1 (ENSSHAG00000002079)	ARMC2 (ENSSHAG00000000930)	ENSSHAG00000018299	AFG1L (ENSSHAG00000018044)	SNX3 (ENSSHAG00000023627)	NR2E1 (ENSSHAG00000017854)	OSTM1 (ENSSHAG00000027777)	SEC63 (ENSSHAG00000017510)	SCML4 (ENSSHAG00000017079)	SOBP (ENSSHAG00000029303)	PDSS2 (ENSSHAG00000015599) #22	BEND3 (ENSSHAG00000015283) #23	MTRES1 (ENSSHAG00000015190) #24	QRSL1 (ENSSHAG00000013597)	RTN4IP1 (ENSSHAG00000013285)	CRYBG1 (ENSSHAG00000012880)	ATG5 (ENSSHAG00000021331)	PRDM1 (ENSSHAG00000010080)	PREP (ENSSHAG00000014161)	POPDC3 (ENSSHAG00000013513)	BVES (ENSSHAG00000013121)	LIN28B (ENSSHAG00000026134)	HACE1 (ENSSHAG00000011274)	GRIK2 (ENSSHAG00000018207)	ASCC3 (ENSSHAG00000016496)	SIM1 (ENSSHAG00000016220)
Opossum	MODERN SPECIES	1	PPIL6 (ENSMODG00000017973)	ENSMODG00000017978	ENSMODG00000017983	CEP57L1 (ENSMODG00000017989)	SESN1 (ENSMODG00000017990)	ARMC2 (ENSMODG00000017993)	ENSMODG00000017994	AFG1L (ENSMODG00000017996)	SNX3 (ENSMODG00000044688)	NR2E1 (ENSMODG00000018005)	OSTM1 (ENSMODG00000018010)	ENSMODG00000018012	SCML4 (ENSMODG00000018013)	SOBP (ENSMODG00000018014)	ENSMODG00000029480	PDSS2 (ENSMODG00000018016) #22	BEND3 (ENSMODG00000018019) #23	MTRES1 (ENSMODG00000018020) #24	ENSMODG00000018021	CD24 (ENSMODG00000049099)	QRSL1 (ENSMODG00000018023)	RTN4IP1 (ENSMODG00000018024)	ENSMODG00000050075	CRYBG1 (ENSMODG00000023357)	ATG5 (ENSMODG00000018027)	PRDM1 (ENSMODG00000018029)	ENSMODG00000028521	ENSMODG00000049471	ENSMODG00000023359	PREP (ENSMODG00000018031)	POPDC3 (ENSMODG00000018033)
Platypus	MODERN SPECIES	10					ENSOANG00000038242	SESN1 (ENSOANG00000015028)	ARMC2 (ENSOANG00000000766)	ENSOANG00000000768	AFG1L (ENSOANG00000000769)	SNX3 (ENSOANG00000000772)	NR2E1 (ENSOANG00000000775)	OSTM1 (ENSOANG00000000776)	SEC63 (ENSOANG00000000777)	SCML4 (ENSOANG00000036521)	SOBP (ENSOANG00000048313)	PDSS2 (ENSOANG00000000783) #22	BEND3 (ENSOANG00000050605) #23	ENSOANG00000000784 #24	QRSL1 (ENSOANG00000003897)	RTN4IP1 (ENSOANG00000003898)	ENSOANG00000003899	ATG5 (ENSOANG00000003900)	PRDM1 (ENSOANG00000004176)	PREP (ENSOANG00000004177)	POPDC3 (ENSOANG00000004179)	BVES (ENSOANG00000047336)	ENSOANG00000047568	HACE1 (ENSOANG00000010300)	GRIK2 (ENSOANG00000010302)	ASCC3 (ENSOANG00000008944)	SIM1 (ENSOANG00000008943)
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Aves	ANCESTRAL SPECIES	10	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Anatidae	ANCESTRAL SPECIES		ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Pink-footed goose	MODERN SPECIES	43	ZBTB24 (ENSABRG00000002021)	PPIL6 (ENSABRG00000002074)	CD164 (ENSABRG00000002170)	ENSABRG00000002188	CEP57L1 (ENSABRG00000002297)	SESN1 (ENSABRG00000002320)	ARMC2 (ENSABRG00000002385)	ENSABRG00000002494	AFG1L (ENSABRG00000002507)	SNX3 (ENSABRG00000002529)	NR2E1 (ENSABRG00000002549)	OSTM1 (ENSABRG00000002574)	SEC63 (ENSABRG00000002590)	SCML4 (ENSABRG00000002657)	SOBP (ENSABRG00000002678)	PDSS2 (ENSABRG00000002702) #22	BEND3 (ENSABRG00000002730) #23	MTRES1 (ENSABRG00000002742) #24	QRSL1 (ENSABRG00000002769)	RTN4IP1 (ENSABRG00000002786)	CRYBG1 (ENSABRG00000002822)	ATG5 (ENSABRG00000002975)	PRDM1 (ENSABRG00000003008)	PREP (ENSABRG00000003068)	POPDC3 (ENSABRG00000003098)	BVES (ENSABRG00000003118)	LIN28B (ENSABRG00000003182)	HACE1 (ENSABRG00000003212)	ENSABRG00000003277
Duck	MODERN SPECIES	21	ENSAPLG00000013181	ENSAPLG00000013116	ZBTB24 (ENSAPLG00000012630)	PPIL6 (ENSAPLG00000012560)	ENSAPLG00000012348	ENSAPLG00000011913	SESN1 (ENSAPLG00000011647)	ARMC2 (ENSAPLG00000011449)	ENSAPLG00000011319	AFG1L (ENSAPLG00000011261)	ENSAPLG00000021471	OSTM1 (ENSAPLG00000010663)	SEC63 (ENSAPLG00000010176)	SCML4 (ENSAPLG00000010070)	SOBP (ENSAPLG00000019216)	PDSS2 (ENSAPLG00000009546) #22	BEND3 (ENSAPLG00000009545) #23	MTRES1 (ENSAPLG00000009523) #24	QRSL1 (ENSAPLG00000009374)	RTN4IP1 (ENSAPLG00000009151)	CRYBG1 (ENSAPLG00000008606)	ATG5 (ENSAPLG00000017968)	PRDM1 (ENSAPLG00000013593)	PREP (ENSAPLG00000014895)	POPDC3 (ENSAPLG00000022652)	BVES (ENSAPLG00000014413)	LIN28B (ENSAPLG00000019549)	HACE1 (ENSAPLG00000006280)	ENSAPLG00000022892	ENSAPLG00000029538	ENSAPLG00000012994
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Japanese quail	MODERN SPECIES	21	ZBTB24 (ENSCJPG00005009404)	PPIL6 (ENSCJPG00005009406)	CD164 (ENSCJPG00005009407)	ENSCJPG00005009408	ENSCJPG00005009411	SESN1 (ENSCJPG00005009414)	ARMC2 (ENSCJPG00005009417)	ENSCJPG00005009420	AFG1L (ENSCJPG00005009422)	SNX3 (ENSCJPG00005009424)	NR2E1 (ENSCJPG00005009425)	SEC63 (ENSCJPG00005009426)	SCML4 (ENSCJPG00005009429)	SOBP (ENSCJPG00005009431)	ENSCJPG00005009433	PDSS2 (ENSCJPG00005009434) #22	BEND3 (ENSCJPG00005009435) #23	MTRES1 (ENSCJPG00005009436) #24	QRSL1 (ENSCJPG00005009439)	RTN4IP1 (ENSCJPG00005009443)	CRYBG1 (ENSCJPG00005009445)	ATG5 (ENSCJPG00005009448)	PRDM1 (ENSCJPG00005009449)	PREP (ENSCJPG00005009454)	POPDC3 (ENSCJPG00005009455)	BVES (ENSCJPG00005009456)	LIN28B (ENSCJPG00005009457)	HACE1 (ENSCJPG00005009458)	GRIK2 (ENSCJPG00005009466)	ASCC3 (ENSCJPG00005009467)	SIM1 (ENSCJPG00005009469)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00740000115564	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000165946	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Chicken	MODERN SPECIES	22	ZBTB24 (ENSGALG00010014135)	PPIL6 (ENSGALG00010014142)	CD164 (ENSGALG00010014156)	ENSGALG00010014210	SESN1 (ENSGALG00010014244)	ARMC2 (ENSGALG00010014288)	ENSGALG00010014302	ENSGALG00010014309	AFG1L (ENSGALG00010014346)	SNX3 (ENSGALG00010014380)	NR2E1 (ENSGALG00010014453)	OSTM1 (ENSGALG00010014487)	SEC63 (ENSGALG00010014504)	SCML4 (ENSGALG00010014550)	SOBP (ENSGALG00010012445)	PDSS2 (ENSGALG00010012466) #22	BEND3 (ENSGALG00010012529) #23	C6orf203 (ENSGALG00010012569) #24	CD24 (ENSGALG00010012582)	QRSL1 (ENSGALG00010013016)	RTN4IP1 (ENSGALG00010013076)	CRYBG1 (ENSGALG00010013160)	ATG5 (ENSGALG00010013247)	PRDM1 (ENSGALG00010013292)	PREP (ENSGALG00010013317)	POPDC3 (ENSGALG00010013335)	BVES (ENSGALG00010015800)	LIN28B (ENSGALG00010013340)	HACE1 (ENSGALG00010012419)	GRIK2 (ENSGALG00010013006)	ASCC3 (ENSGALG00010015140)
Turkey	MODERN SPECIES	11	ENSMGAG00000018692	ENSMGAG00000013379	AFG1L (ENSMGAG00000013490)	SNX3 (ENSMGAG00000013494)	NR2E1 (ENSMGAG00000013495)	OSTM1 (ENSMGAG00000013498)	ENSMGAG00000013524	ENSMGAG00000013523	ENSMGAG00000013520	ENSMGAG00000013519	ENSMGAG00000018204	ENSMGAG00000022679	QRSL1 (ENSMGAG00000013518)	ENSMGAG00000013515 #23	ENSMGAG00000013517 #24	PDSS2 (ENSMGAG00000013514) #22	ENSMGAG00000013512	ENSMGAG00000021606	ENSMGAG00000020588	PREP (ENSMGAG00000013527)	BVES (ENSMGAG00000013529)	LIN28B (ENSMGAG00000013531)	HACE1 (ENSMGAG00000013533)	ENSMGAG00000015902	ENSMGAG00000018221	ENSMGAG00000019904	ENSMGAG00000022447	ENSMGAG00000013594	ENSMGAG00000021109	ENSMGAG00000019925	ENSMGAG00000022529
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00740000115564	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00740000115564	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Golden eagle	MODERN SPECIES	11	RFX6 (ENSACCG00020006700)	VGLL2 (ENSACCG00020006724)	ENSACCG00020006739	CEP57L1 (ENSACCG00020006757)	SESN1 (ENSACCG00020006789)	ARMC2 (ENSACCG00020006846)	ENSACCG00020006878	AFG1L (ENSACCG00020006893)	SNX3 (ENSACCG00020006910)	NR2E1 (ENSACCG00020006946)	OSTM1 (ENSACCG00020006965)	SEC63 (ENSACCG00020006981)	ENSACCG00020006999	ENSACCG00020007009	SOBP (ENSACCG00020007022)	PDSS2 (ENSACCG00020007038) #22	BEND3 (ENSACCG00020007047) #23	MTRES1 (ENSACCG00020007067) #24	QRSL1 (ENSACCG00020007083)	RTN4IP1 (ENSACCG00020007099)	CRYBG1 (ENSACCG00020007223)	ATG5 (ENSACCG00020007338)	PRDM1 (ENSACCG00020007354)	PREP (ENSACCG00020007365)	POPDC3 (ENSACCG00020007382)	BVES (ENSACCG00020007400)	LIN28B (ENSACCG00020007419)	HACE1 (ENSACCG00020007438)	GRIK2 (ENSACCG00020007485)	ASCC3 (ENSACCG00020007539)	SIM1 (ENSACCG00020007595)
Kakapo	MODERN SPECIES	23	ZBTB24 (ENSSHBG00005000405)	PPIL6 (ENSSHBG00005000409)	ENSSHBG00005000411	ENSSHBG00005000412	ENSSHBG00005000414	SESN1 (ENSSHBG00005000417)	ARMC2 (ENSSHBG00005000420)	ENSSHBG00005000424	AFG1L (ENSSHBG00005006641)	SNX3 (ENSSHBG00005006685)	NR2E1 (ENSSHBG00005006698)	OSTM1 (ENSSHBG00005006714)	SEC63 (ENSSHBG00005006731)	SCML4 (ENSSHBG00005006744)	SOBP (ENSSHBG00005006768)	PDSS2 (ENSSHBG00005006788) #22	BEND3 (ENSSHBG00005006817) #23	MTRES1 (ENSSHBG00005006842) #24	QRSL1 (ENSSHBG00005006858)	RTN4IP1 (ENSSHBG00005006887)	CRYBG1 (ENSSHBG00005006932)	ATG5 (ENSSHBG00005006968)	PRDM1 (ENSSHBG00005006993)	PREP (ENSSHBG00005007018)	POPDC3 (ENSSHBG00005007036)	BVES (ENSSHBG00005007052)	LIN28B (ENSSHBG00005007139)	HACE1 (ENSSHBG00005007193)	GRIK2 (ENSSHBG00005007267)	ASCC3 (ENSSHBG00005007565)	SIM1 (ENSSHBG00005008456)
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00740000115564	ENSGT00940000159373	ENSGT00530000063929.a.a	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00960000191023	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Great tit	MODERN SPECIES	22	CD164 (ENSPMJG00000015306)	CEP57L1 (ENSPMJG00000015311)	SESN1 (ENSPMJG00000015312)	ARMC2 (ENSPMJG00000015313)	ENSPMJG00000015315	AFG1L (ENSPMJG00000015316)	SNX3 (ENSPMJG00000015317)	NR2E1 (ENSPMJG00000015318)	OSTM1 (ENSPMJG00000015320)	ENSPMJG00000015321	SEC63 (ENSPMJG00000015322)	ENSPMJG00000015323	ENSPMJG00000015324	ENSPMJG00000015325	SOBP (ENSPMJG00000015326)	PDSS2 (ENSPMJG00000015327) #22	BEND3 (ENSPMJG00000015328) #23	MTRES1 (ENSPMJG00000015329) #24	QRSL1 (ENSPMJG00000015332)	RTN4IP1 (ENSPMJG00000015333)	CRYBG1 (ENSPMJG00000015334)	ATG5 (ENSPMJG00000000069)	PRDM1 (ENSPMJG00000000106)	PREP (ENSPMJG00000000193)	POPDC3 (ENSPMJG00000000231)	BVES (ENSPMJG00000000259)	LIN28B (ENSPMJG00000000304)	HACE1 (ENSPMJG00000000330)	GRIK2 (ENSPMJG00000000444)	ASCC3 (ENSPMJG00000000583)	SIM1 (ENSPMJG00000000702)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00740000115564	ENSGT00940000159373	ENSGT00530000063929.a.a	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00960000191023	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00740000115564	ENSGT00940000159373	ENSGT00530000063929.a.a	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00960000191023	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Passeroidea	ANCESTRAL SPECIES		ENSGT00550000074943	ENSGT00740000115564	ENSGT00940000159373	ENSGT00530000063929.a.a	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Common canary	MODERN SPECIES	1	AK9 (ENSSCAG00000000143)	ZBTB24 (ENSSCAG00000000183)	ENSSCAG00000000225	CEP57L1 (ENSSCAG00000000239)	SESN1 (ENSSCAG00000000267)	ARMC2 (ENSSCAG00000000302)	ENSSCAG00000000367	AFG1L (ENSSCAG00000000396)	SNX3 (ENSSCAG00000000476)	NR2E1 (ENSSCAG00000000484)	OSTM1 (ENSSCAG00000000492)	SEC63 (ENSSCAG00000000504)	SCML4 (ENSSCAG00000000531)	ENSSCAG00000000536	SOBP (ENSSCAG00000000565)	PDSS2 (ENSSCAG00000000586) #22	BEND3 (ENSSCAG00000000615) #23	MTRES1 (ENSSCAG00000000620) #24	QRSL1 (ENSSCAG00000000635)	RTN4IP1 (ENSSCAG00000000647)	CRYBG1 (ENSSCAG00000000675)	ATG5 (ENSSCAG00000000793)	PRDM1 (ENSSCAG00000000801)	PREP (ENSSCAG00000000866)	POPDC3 (ENSSCAG00000000884)	BVES (ENSSCAG00000000898)	LIN28B (ENSSCAG00000000914)	HACE1 (ENSSCAG00000000966)	GRIK2 (ENSSCAG00000001013)	ASCC3 (ENSSCAG00000001112)	SIM1 (ENSSCAG00000001136)
Zebra finch	MODERN SPECIES	23	AK9 (ENSTGUG00000012097)	ZBTB24 (ENSTGUG00000012098)	CD164 (ENSTGUG00000028695)	CEP57L1 (ENSTGUG00000012107)	SESN1 (ENSTGUG00000012113)	ARMC2 (ENSTGUG00000012122)	ENSTGUG00000012135	AFG1L (ENSTGUG00000012136)	NR2E1 (ENSTGUG00000012147)	SNX3 (ENSTGUG00000012141)	OSTM1 (ENSTGUG00000012154)	SEC63 (ENSTGUG00000012155)	ENSTGUG00000012164	ENSTGUG00000027856	SOBP (ENSTGUG00000012167)	PDSS2 (ENSTGUG00000012168) #22	BEND3 (ENSTGUG00000012175) #23	MTRES1 (ENSTGUG00000012177) #24	QRSL1 (ENSTGUG00000012180)	RTN4IP1 (ENSTGUG00000012187)	CRYBG1 (ENSTGUG00000012192)	ATG5 (ENSTGUG00000012200)	PRDM1 (ENSTGUG00000012204)	PREP (ENSTGUG00000012206)	POPDC3 (ENSTGUG00000029737)	BVES (ENSTGUG00000012218)	LIN28B (ENSTGUG00000029445)	HACE1 (ENSTGUG00000012227)	GRIK2 (ENSTGUG00000012240)	ASCC3 (ENSTGUG00000012262)	SIM1 (ENSTGUG00000012278)
Medium ground finch	MODERN SPECIES	9	ZBTB24 (ENSGFOG00000004946)	AK9 (ENSGFOG00000004838)	CD164 (ENSGFOG00000004802)	CEP57L1 (ENSGFOG00000004778)	SESN1 (ENSGFOG00000004752)	ARMC2 (ENSGFOG00000004703)	ENSGFOG00000004686	AFG1L (ENSGFOG00000004621)	SNX3 (ENSGFOG00000004607)	NR2E1 (ENSGFOG00000004562)	OSTM1 (ENSGFOG00000004506)	ENSGFOG00000004482	SEC63 (ENSGFOG00000004464)	SCML4 (ENSGFOG00000004405)	SOBP (ENSGFOG00000004389)	PDSS2 (ENSGFOG00000004353) #22	BEND3 (ENSGFOG00000004347) #23	ENSGFOG00000004336	ADGRF5 (ENSGFOG00000004314)	TNFRSF21 (ENSGFOG00000004293)	CD2AP (ENSGFOG00000004279)	ENSGFOG00000004244	OPN5 (ENSGFOG00000004205)	PTCHD4 (ENSGFOG00000004194)	ENSGFOG00000004175	MRPL19 (ENSGFOG00000004154)	GCFC2 (ENSGFOG00000004136)	ENSGFOG00000004125	ITSN2 (ENSGFOG00000004102)	ENSGFOG00000004093	TP53I3 (ENSGFOG00000004084)
Flycatcher	MODERN SPECIES	21	ENSFALG00000026289	ENSFALG00000011862	ZBTB24 (ENSFALG00000011851)	CD164 (ENSFALG00000024174)	ENSFALG00000024436	SESN1 (ENSFALG00000011813)	ARMC2 (ENSFALG00000011800)	ENSFALG00000025540	AFG1L (ENSFALG00000028584)	SNX3 (ENSFALG00000011775)	NR2E1 (ENSFALG00000027672)	OSTM1 (ENSFALG00000027733)	SEC63 (ENSFALG00000011739)	SCML4 (ENSFALG00000011729)	SOBP (ENSFALG00000011712)	PDSS2 (ENSFALG00000024360) #22	MTRES1 (ENSFALG00000011688) #24	QRSL1 (ENSFALG00000011682)	RTN4IP1 (ENSFALG00000027502)	CRYBG1 (ENSFALG00000028843)	ATG5 (ENSFALG00000011631)	PRDM1 (ENSFALG00000011624)	PREP (ENSFALG00000011608)	POPDC3 (ENSFALG00000011603)	BVES (ENSFALG00000011583)	LIN28B (ENSFALG00000023138)	HACE1 (ENSFALG00000011548)	GRIK2 (ENSFALG00000005281)	ASCC3 (ENSFALG00000005260)	SIM1 (ENSFALG00000009592)	PRDM13 (ENSFALG00000025976)
African ostrich	MODERN SPECIES	685	PPIL6 (ENSSCUG00000008888)	CD164 (ENSSCUG00000008884)	ENSSCUG00000008873	CEP57L1 (ENSSCUG00000008859)	SESN1 (ENSSCUG00000008852)	ARMC2 (ENSSCUG00000008845)	ENSSCUG00000008840	AFG1L (ENSSCUG00000008839)	SNX3 (ENSSCUG00000008837)	NR2E1 (ENSSCUG00000008835)	OSTM1 (ENSSCUG00000008834)	ENSSCUG00000008831	SEC63 (ENSSCUG00000008829)	SCML4 (ENSSCUG00000008824)	SOBP (ENSSCUG00000008820)	PDSS2 (ENSSCUG00000008819) #22	BEND3 (ENSSCUG00000008817) #23	MTRES1 (ENSSCUG00000008816) #24	QRSL1 (ENSSCUG00000008810)	RTN4IP1 (ENSSCUG00000008804)	CRYBG1 (ENSSCUG00000008797)	ATG5 (ENSSCUG00000008790)	PRDM1 (ENSSCUG00000008787)	PREP (ENSSCUG00000008776)	POPDC3 (ENSSCUG00000008774)	BVES (ENSSCUG00000008772)	LIN28B (ENSSCUG00000008767)	HACE1 (ENSSCUG00000008760)	ENSSCUG00000008750
Australian saltwater crocodile	MODERN SPECIES	38	PPIL6 (ENSCPRG00005001746)	CD164 (ENSCPRG00005001741)	ENSCPRG00005001734	CEP57L1 (ENSCPRG00005001707)	SESN1 (ENSCPRG00005001512)	ARMC2 (ENSCPRG00005001485)	ENSCPRG00005001465	AFG1L (ENSCPRG00005001415)	SNX3 (ENSCPRG00005001413)	NR2E1 (ENSCPRG00005001409)	OSTM1 (ENSCPRG00005001321)	ENSCPRG00005001317	SEC63 (ENSCPRG00005001290)	SCML4 (ENSCPRG00005001262)	SOBP (ENSCPRG00005001260)	PDSS2 (ENSCPRG00005001243) #22	BEND3 (ENSCPRG00005001204) #23	MTRES1 (ENSCPRG00005001199) #24	QRSL1 (ENSCPRG00005001174)	RTN4IP1 (ENSCPRG00005001145)	CRYBG1 (ENSCPRG00005001130)	ATG5 (ENSCPRG00005001095)	PRDM1 (ENSCPRG00005001075)	PREP (ENSCPRG00005001045)	POPDC3 (ENSCPRG00005001029)	BVES (ENSCPRG00005001021)	LIN28B (ENSCPRG00005001009)	ENSCPRG00005000982	HACE1 (ENSCPRG00005000946)	GRIK2 (ENSCPRG00005000722)	ASCC3 (ENSCPRG00005000542)
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Emydidae	ANCESTRAL SPECIES	8	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
painted turtle	MODERN SPECIES	2422	CD164 (ENSCPBG00000006349)	ENSCPBG00000006338	CEP57L1 (ENSCPBG00000006325)	SESN1 (ENSCPBG00000006317)	ARMC2 (ENSCPBG00000006308)	ENSCPBG00000006292	AFG1L (ENSCPBG00000006280)	SNX3 (ENSCPBG00000006271)	NR2E1 (ENSCPBG00000006262)	ENSCPBG00000006236	OSTM1 (ENSCPBG00000006232)	ENSCPBG00000006227	SEC63 (ENSCPBG00000006213)	SCML4 (ENSCPBG00000006199)	SOBP (ENSCPBG00000006184)	PDSS2 (ENSCPBG00000006170) #22	BEND3 (ENSCPBG00000006167) #23	MTRES1 (ENSCPBG00000006157) #24	QRSL1 (ENSCPBG00000006147)	RTN4IP1 (ENSCPBG00000006136)	CRYBG1 (ENSCPBG00000004238)	ATG5 (ENSCPBG00000004179)	PRDM1 (ENSCPBG00000004165)	PREP (ENSCPBG00000004147)	POPDC3 (ENSCPBG00000004134)	BVES (ENSCPBG00000004119)	LIN28B (ENSCPBG00000004104)	HACE1 (ENSCPBG00000004045)	ENSCPBG00000003987	ENSCPBG00000003981	GRIK2 (ENSCPBG00000003946)
Three-toed box turtle	MODERN SPECIES	15	ENSTMTG00000000710	CEP57L1 (ENSTMTG00000000745)	SESN1 (ENSTMTG00000000764)	ARMC2 (ENSTMTG00000000806)	ENSTMTG00000000825	ENSTMTG00000000836	AFG1L (ENSTMTG00000000876)	SNX3 (ENSTMTG00000000952)	NR2E1 (ENSTMTG00000000962)	OSTM1 (ENSTMTG00000000985)	SEC63 (ENSTMTG00000000995)	ENSTMTG00000001014	ENSTMTG00000001019	ENSTMTG00000001027	SOBP (ENSTMTG00000001041)	PDSS2 (ENSTMTG00000001055) #22	BEND3 (ENSTMTG00000001065) #23	ENSTMTG00000001079	MTRES1 (ENSTMTG00000001088) #24	QRSL1 (ENSTMTG00000001095)	RTN4IP1 (ENSTMTG00000001116)	CRYBG1 (ENSTMTG00000001144)	ATG5 (ENSTMTG00000001175)	PRDM1 (ENSTMTG00000001194)	PREP (ENSTMTG00000001210)	POPDC3 (ENSTMTG00000001226)	BVES (ENSTMTG00000001231)	LIN28B (ENSTMTG00000001243)	HACE1 (ENSTMTG00000001261)	GRIK2 (ENSTMTG00000001374)	ASCC3 (ENSTMTG00000001886)
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Goode s thornscrub tortoise	MODERN SPECIES	17	SESN1 (ENSGEVG00005010380)	ARMC2 (ENSGEVG00005010280)	ENSGEVG00005010206	ENSGEVG00005010163	ENSGEVG00005010097	ENSGEVG00005010074	AFG1L (ENSGEVG00005010032)	SNX3 (ENSGEVG00005009991)	NR2E1 (ENSGEVG00005009891)	OSTM1 (ENSGEVG00005009859)	ENSGEVG00005009841	SEC63 (ENSGEVG00005009790)	ENSGEVG00005009741	ENSGEVG00005009696	SOBP (ENSGEVG00005009603)	PDSS2 (ENSGEVG00005009557) #22	BEND3 (ENSGEVG00005009513) #23	MTRES1 (ENSGEVG00005009472) #24	QRSL1 (ENSGEVG00005009425)	RTN4IP1 (ENSGEVG00005009393)	CRYBG1 (ENSGEVG00005009083)	ATG5 (ENSGEVG00005009020)	PRDM1 (ENSGEVG00005003790)	PREP (ENSGEVG00005003770)	POPDC3 (ENSGEVG00005003754)	BVES (ENSGEVG00005003745)	LIN28B (ENSGEVG00005003726)	HACE1 (ENSGEVG00005003662)	ENSGEVG00005003633	GRIK2 (ENSGEVG00005003385)	ASCC3 (ENSGEVG00005003199)
Abingdon island giant tortoise	MODERN SPECIES	829																PDSS2 (ENSCABG00000019834) #22
Chinese turtle	MODERN SPECIES	1101	ENSPSIG00000008723	CEP57L1 (ENSPSIG00000008493)	ENSPSIG00000008445	SESN1 (ENSPSIG00000008436)	ARMC2 (ENSPSIG00000007818)	ENSPSIG00000001197	ENSPSIG00000007776	ENSPSIG00000001187	AFG1L (ENSPSIG00000007699)	SNX3 (ENSPSIG00000006770)	NR2E1 (ENSPSIG00000006035)	OSTM1 (ENSPSIG00000006027)	SEC63 (ENSPSIG00000005853)	SCML4 (ENSPSIG00000005585)	SOBP (ENSPSIG00000005413)	PDSS2 (ENSPSIG00000005144) #22	BEND3 (ENSPSIG00000005074) #23	MTRES1 (ENSPSIG00000005067) #24	QRSL1 (ENSPSIG00000018066)	RTN4IP1 (ENSPSIG00000017894)	ENSPSIG00000017793
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Episquamata	ANCESTRAL SPECIES		ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Laterata	ANCESTRAL SPECIES	4	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Common wall lizard	MODERN SPECIES	11	PPIL6 (ENSPMRG00000003033)	CD164 (ENSPMRG00000003020)	ENSPMRG00000002961	CEP57L1 (ENSPMRG00000002944)	SESN1 (ENSPMRG00000002928)	ARMC2 (ENSPMRG00000002915)	ENSPMRG00000002905	ENSPMRG00000002895	AFG1L (ENSPMRG00000002870)	SNX3 (ENSPMRG00000002854)	NR2E1 (ENSPMRG00000002845)	OSTM1 (ENSPMRG00000002840)	SEC63 (ENSPMRG00000002784)	SCML4 (ENSPMRG00000002753)	SOBP (ENSPMRG00000002743)	PDSS2 (ENSPMRG00000002734) #22	BEND3 (ENSPMRG00000002730) #23	ENSPMRG00000002726 #24	QRSL1 (ENSPMRG00000002712)	RTN4IP1 (ENSPMRG00000002681)	CRYBG1 (ENSPMRG00000002468)	ATG5 (ENSPMRG00000002433)	PRDM1 (ENSPMRG00000002419)	ENSPMRG00000002413	PREP (ENSPMRG00000002400)	POPDC3 (ENSPMRG00000002395)	BVES (ENSPMRG00000007832)	LIN28B (ENSPMRG00000007830)	ENSPMRG00000007826	GRIK2 (ENSPMRG00000007778)	ASCC3 (ENSPMRG00000007709)
Argentine black and white tegu	MODERN SPECIES	2	ENSSMRG00000013284	ENSSMRG00000013285	CEP57L1 (ENSSMRG00000013290)	SESN1 (ENSSMRG00000013292)	ARMC2 (ENSSMRG00000013293)	ENSSMRG00000013294	ENSSMRG00000013296	ENSSMRG00000013298	AFG1L (ENSSMRG00000013302)	SNX3 (ENSSMRG00000013304)	NR2E1 (ENSSMRG00000013306)	OSTM1 (ENSSMRG00000013307)	SEC63 (ENSSMRG00000013310)	SCML4 (ENSSMRG00000013314)	SOBP (ENSSMRG00000013316)	PDSS2 (ENSSMRG00000013317) #22	BEND3 (ENSSMRG00000013319) #23	MTRES1 (ENSSMRG00000013320) #24	QRSL1 (ENSSMRG00000013322)	RTN4IP1 (ENSSMRG00000013323)	CRYBG1 (ENSSMRG00000013325)	ATG5 (ENSSMRG00000013331)	PRDM1 (ENSSMRG00000013332)	PREP (ENSSMRG00000013333)	POPDC3 (ENSSMRG00000013334)	BVES (ENSSMRG00000013335)	LIN28B (ENSSMRG00000013336)	HACE1 (ENSSMRG00000013337)	ENSSMRG00000013339	GRIK2 (ENSSMRG00000013342)	ASCC3 (ENSSMRG00000013348)
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Elapidae	ANCESTRAL SPECIES		ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866.a	ENSGT00550000074866.b	ENSGT00880000138028.b.b.h	ENSGT00880000138028.b.b.g	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00960000190953	ENSGT00550000074866.b	ENSGT00880000138028.b.b.h	ENSGT00880000138028.b.b.g	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610
Eastern brown snake	MODERN SPECIES	4	ENSPTXG00000014181	ENSPTXG00000014182	CEP57L1 (ENSPTXG00000006876)	SESN1 (ENSPTXG00000006877)	ARMC2 (ENSPTXG00000006879)	ENSPTXG00000006882	ENSPTXG00000006886	AFG1L (ENSPTXG00000006888)	SNX3 (ENSPTXG00000006890)	NR2E1 (ENSPTXG00000006891)	OSTM1 (ENSPTXG00000006893)	SEC63 (ENSPTXG00000006895)	SCML4 (ENSPTXG00000006896)	ENSPTXG00000006897	SOBP (ENSPTXG00000006898)	PDSS2 (ENSPTXG00000006900) #22	BEND3 (ENSPTXG00000006903) #23	MTRES1 (ENSPTXG00000006904) #24	ENSPTXG00000006905	ENSPTXG00000006906	ENSPTXG00000006907	RTN4IP1 (ENSPTXG00000006908)	CRYBG1 (ENSPTXG00000006909)	ATG5 (ENSPTXG00000006911)	PRDM1 (ENSPTXG00000006912)	PREP (ENSPTXG00000006913)	POPDC3 (ENSPTXG00000006914)	BVES (ENSPTXG00000006915)	LIN28B (ENSPTXG00000006916)	HACE1 (ENSPTXG00000006917)	GRIK2 (ENSPTXG00000006929)
Mainland tiger snake	MODERN SPECIES	16	CD164 (ENSNSUG00000018313)	ENSNSUG00000018312	CEP57L1 (ENSNSUG00000018311)	SESN1 (ENSNSUG00000018253)	ARMC2 (ENSNSUG00000018252)	ENSNSUG00000018251	ENSNSUG00000018250	AFG1L (ENSNSUG00000018249)	SNX3 (ENSNSUG00000018248)	NR2E1 (ENSNSUG00000018247)	OSTM1 (ENSNSUG00000018246)	SEC63 (ENSNSUG00000018107)	SCML4 (ENSNSUG00000018103)	ENSNSUG00000018102	SOBP (ENSNSUG00000018101)	PDSS2 (ENSNSUG00000018098) #22	BEND3 (ENSNSUG00000018097) #23	MTRES1 (ENSNSUG00000018096) #24	ENSNSUG00000018094	QRSL1 (ENSNSUG00000018093)	ENSNSUG00000018092	ENSNSUG00000018090	CRYBG1 (ENSNSUG00000018073)	ATG5 (ENSNSUG00000018071)	PRDM1 (ENSNSUG00000018069)	PREP (ENSNSUG00000017917)	POPDC3 (ENSNSUG00000017913)	BVES (ENSNSUG00000017912)	LIN28B (ENSNSUG00000017911)	HACE1 (ENSNSUG00000017909)	GRIK2 (ENSNSUG00000017907)
Blue-lipped sea krait	MODERN SPECIES	4788																PDSS2 (ENSLLTG00000015532) #22
Indian cobra	MODERN SPECIES		ZBTB24 (ENSNNAG00000000761)	PPIL6 (ENSNNAG00000000769)	CD164 (ENSNNAG00000000779)	ENSNNAG00000000796	CEP57L1 (ENSNNAG00000000903)	SESN1 (ENSNNAG00000000946)	ARMC2 (ENSNNAG00000000975)	ENSNNAG00000000996	AFG1L (ENSNNAG00000001013)	SNX3 (ENSNNAG00000001033)	NR2E1 (ENSNNAG00000001048)	OSTM1 (ENSNNAG00000001068)	SEC63 (ENSNNAG00000001110)	SCML4 (ENSNNAG00000001175)	SOBP (ENSNNAG00000001188)	PDSS2 (ENSNNAG00000001202) #22	BEND3 (ENSNNAG00000001219) #23	MTRES1 (ENSNNAG00000001224) #24	ENSNNAG00000001237	QRSL1 (ENSNNAG00000001246)	RTN4IP1 (ENSNNAG00000001272)	CRYBG1 (ENSNNAG00000001368)	ATG5 (ENSNNAG00000001541)	PRDM1 (ENSNNAG00000001559)	PREP (ENSNNAG00000001576)	POPDC3 (ENSNNAG00000001593)	BVES (ENSNNAG00000001601)	LIN28B (ENSNNAG00000001614)	HACE1 (ENSNNAG00000001627)	GRIK2 (ENSNNAG00000002042)	ASCC3 (ENSNNAG00000002415)
tuatara	MODERN SPECIES	781								ENSSPUG00000006960	AFG1L (ENSSPUG00000006972)	SNX3 (ENSSPUG00000006997)	NR2E1 (ENSSPUG00000007007)	OSTM1 (ENSSPUG00000007022)	SEC63 (ENSSPUG00000007035)	ENSSPUG00000007093	ENSSPUG00000007098	PDSS2 (ENSSPUG00000007117) #22	MTRES1 (ENSSPUG00000007141) #24	ENSSPUG00000007149	QRSL1 (ENSSPUG00000007158)	ENSSPUG00000007163	ENSSPUG00000007175	CRYBG1 (ENSSPUG00000007257)	ATG5 (ENSSPUG00000007600)	PRDM1 (ENSSPUG00000007628)
Anura	ANCESTRAL SPECIES	8	ENSGT00940000159373	ENSGT00940000159634	ENSGT00530000063929.a.b	ENSGT00940000165946	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695	ENSGT00390000004766	ENSGT00940000154798.a.d.a	ENSGT00530000063426.b.b	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000153295.b	ENSGT00940000155839	ENSGT00940000155610	ENSGT00940000155377	ENSGT00940000156143
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000025950	ENSLLEG00000026751	NR2E1 (ENSLLEG00000026822)	SNX3 (ENSLLEG00000027054)	ENSLLEG00000027151	AFG1L (ENSLLEG00000027182)	ENSLLEG00000027380	ENSLLEG00000027399	ARMC2 (ENSLLEG00000027469)	ENSLLEG00000027615	SESN1 (ENSLLEG00000027639)	ENSLLEG00000027733	SCML4 (ENSLLEG00000027770)	ENSLLEG00000027857	SOBP (ENSLLEG00000027910)	PDSS2 (ENSLLEG00000014579) #22	BEND3 (ENSLLEG00000014794) #23	QRSL1 (ENSLLEG00000014906)	ENSLLEG00000015371	RTN4IP1 (ENSLLEG00000015388)	CRYBG1 (ENSLLEG00000015541)	ENSLLEG00000015884	ATG5 (ENSLLEG00000015928)	PRDM1 (ENSLLEG00000016024)	PREP (ENSLLEG00000016113)	ENSLLEG00000016433	BVES (ENSLLEG00000016474)	POPDC3 (ENSLLEG00000016822)	ENSLLEG00000016881	LIN28B (ENSLLEG00000016986)	ENSLLEG00000017051
Coelacanth	MODERN SPECIES	349			ENSLACG00000017646	CEP57L1 (ENSLACG00000017598)	SESN1 (ENSLACG00000017303)	ENSLACG00000022629	ENSLACG00000016990	ENSLACG00000016385	AFG1L (ENSLACG00000016109)	SNX3 (ENSLACG00000015744)	NR2E1 (ENSLACG00000015675)	SEC63 (ENSLACG00000014494)	ENSLACG00000013995	SCML4 (ENSLACG00000013280)	ENSLACG00000012669	PDSS2 (ENSLACG00000008720) #22	BEND3 (ENSLACG00000007666) #23	MTRES1 (ENSLACG00000007220) #24
Actinopterygii	ANCESTRAL SPECIES	132	ENSGT00940000159634	ENSGT00530000063929.a.b	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b
Reedfish	MODERN SPECIES	11	cd164 (ENSECRG00000000670)	ENSECRG00000000698	cep57l1 (ENSECRG00000000737)	sesn1 (ENSECRG00000000779)	ARMC2 (ENSECRG00000000830)	FOXO3 (ENSECRG00000000874)	afg1la (ENSECRG00000000902)	ENSECRG00000000933	snx3 (ENSECRG00000000950)	nr2e1 (ENSECRG00000001015)	OSTM1 (ENSECRG00000001153)	sec63 (ENSECRG00000001182)	SCML4 (ENSECRG00000001212)	ENSECRG00000001232	sobpa (ENSECRG00000001248)	pdss2 (ENSECRG00000001266) #22	bend3 (ENSECRG00000001297) #23	mtres1 (ENSECRG00000001319) #24	rtn4ip1 (ENSECRG00000001347)	ENSECRG00000001379	CEP162 (ENSECRG00000001445)	mrap2a (ENSECRG00000001507)	CYB5R4 (ENSECRG00000001521)	sim1a (ENSECRG00000001559)	ASCC3 (ENSECRG00000001635)	GRIK2 (ENSECRG00000001851)	ENSECRG00000001886	HACE1 (ENSECRG00000001907)	lin28b (ENSECRG00000001972)	bves (ENSECRG00000002028)	popdc3 (ENSECRG00000002057)
Neopterygii	ANCESTRAL SPECIES	107	ENSGT00530000063929.a.b	ENSGT00940000163170	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826	ENSGT00390000013227.a.a	ENSGT00940000153609.b	ENSGT00940000156693	ENSGT00390000012341	ENSGT00940000174412	ENSGT00390000001965	ENSGT00940000157463	ENSGT00940000154164.c	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b
Osteoglossocephalai	ANCESTRAL SPECIES	70	ENSGT00390000009688	ENSGT00590000083139.c	ENSGT00590000083139.d	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900	ENSGT00390000004263.b	ENSGT00940000155646	ENSGT00940000160213.b	ENSGT00940000165355	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695.i.b
Clupeocephala	ANCESTRAL SPECIES	359						ENSGT00590000083139.d.b	ENSGT00940000154645.A	ENSGT00940000155646	ENSGT00940000160213.b	ENSGT00940000165355	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24
Otomorpha	ANCESTRAL SPECIES	141	ENSGT00940000174412	ENSGT00390000001965	ENSGT00940000157463.b	ENSGT00940000161165	ENSGT00390000012474	ENSGT00940000155678	ENSGT00940000158432	ENSGT00390000018199.a	ENSGT00390000003316.c.b.a	ENSGT00940000156891.a.b	ENSGT00940000153804.A	ENSGT00940000160213.b	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00940000157581.a	ENSGT00940000155745	ENSGT00940000155979.g	ENSGT00940000160181.i
Clupeiformes	ANCESTRAL SPECIES	61	ENSGT00940000157229	ENSGT00940000164928	ENSGT00920000149143	ENSGT00940000158191.a	ENSGT00950000183192.a.a	ENSGT00950000183195.b.a	ENSGT00730000111019.e.a	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.C	ENSGT00940000154164.c.b	ENSGT00880000138028.b.a	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00940000157581.a	ENSGT00940000155745	ENSGT00940000155979.g	ENSGT00940000160181.i
Atlantic herring	MODERN SPECIES	5	golga5 (ENSCHAG00000016339)	trip11 (ENSCHAG00000017105)	fbln5 (ENSCHAG00000017387)	TC2N (ENSCHAG00000017844)	plek2 (ENSCHAG00000017887)	si:ch211-10a23.2 (ENSCHAG00000017899)	zfyve26 (ENSCHAG00000017951)	rdh12 (ENSCHAG00000017996)	vti1b (ENSCHAG00000018067)	arg2 (ENSCHAG00000018078)	RBM25 (ENSCHAG00000018227)	KCNF1 (ENSCHAG00000018430)	si:dkey-18j18.3 (ENSCHAG00000018451)	rock2a (ENSCHAG00000018502)	sobpa (ENSCHAG00000019609)	pdss2 (ENSCHAG00000019637) #22	bend3 (ENSCHAG00000019663) #23	mtres1 (ENSCHAG00000019672) #24	matn3b (ENSCHAG00000019678)	wdr35 (ENSCHAG00000019703)	kcns3a (ENSCHAG00000020115)	rdh14a (ENSCHAG00000020116)	nt5c1ba (ENSCHAG00000020134)	ENSCHAG00000020183	ENSCHAG00000020189	nt5c1ba (ENSCHAG00000020198)	osr1 (ENSCHAG00000020308)	utp25 (ENSCHAG00000020321)	SYT14 (ENSCHAG00000020513)	SERTAD4 (ENSCHAG00000020525)	ENSCHAG00000020532
Denticle herring	MODERN SPECIES		fbln5 (ENSDCDG00000021384)	TC2N (ENSDCDG00000021389)	plek2 (ENSDCDG00000021391)	si:ch211-10a23.2 (ENSDCDG00000021393)	zfyve26 (ENSDCDG00000021402)	rdh12 (ENSDCDG00000021509)	vti1b (ENSDCDG00000021523)	arg2 (ENSDCDG00000021529)	RBM25 (ENSDCDG00000021554)	kcns3a (ENSDCDG00000021556)	si:dkey-18j18.3 (ENSDCDG00000021557)	slc66a3 (ENSDCDG00000021558)	rock2a (ENSDCDG00000021612)	ENSDCDG00000028650	sobpa (ENSDCDG00000028652)	pdss2 (ENSDCDG00000028655) #22	bend3 (ENSDCDG00000028659) #23	mtres1 (ENSDCDG00000028660) #24	matn3b (ENSDCDG00000028663)	wdr35 (ENSDCDG00000028679)	rdh14a (ENSDCDG00000029283)	osr1 (ENSDCDG00000029285)	utp25 (ENSDCDG00000029290)	SYT14 (ENSDCDG00000029303)	SERTAD4 (ENSDCDG00000029304)	clic4 (ENSDCDG00000029305)	srrm1 (ENSDCDG00000029306)	tdh2 (ENSDCDG00000029312)	zgc:154055 (ENSDCDG00000029321)	FAM167B (ENSDCDG00000029335)	lck (ENSDCDG00000029414)
Otophysi	ANCESTRAL SPECIES	381															ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00940000157581.a	ENSGT00940000155745	ENSGT00940000155979.g	ENSGT00940000160181.i
Characiphysae	ANCESTRAL SPECIES	222															ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00940000157581.a	ENSGT00940000155745	ENSGT00940000155979.g	ENSGT00940000160181.i
Channel catfish	MODERN SPECIES	22	fbln5 (ENSIPUG00000001912)	tc2n (ENSIPUG00000001920)	plek2 (ENSIPUG00000001927)	lgalsl-b (ENSIPUG00000001935)	zfyve26 (ENSIPUG00000001951)	rdh11 (ENSIPUG00000001999)	vti1b (ENSIPUG00000002018)	arg2 (ENSIPUG00000002048)	Kcnf1 (ENSIPUG00000002058)	ENSIPUG00000002063	c3h2orf50 (ENSIPUG00000002067)	rock2a (ENSIPUG00000002080)	ENSIPUG00000002116	Pqlc3 (ENSIPUG00000002126)	sobp (ENSIPUG00000002150)	pdss2 (ENSIPUG00000002179) #22	ENSIPUG00000002211	bend3 (ENSIPUG00000002220) #23	c3h6orf203 (ENSIPUG00000002230) #24	matn3b (ENSIPUG00000002242)	wdr35 (ENSIPUG00000002268)	kcns3a (ENSIPUG00000002336)	mrpl2 (ENSIPUG00000002348)	Rdh14 (ENSIPUG00000002360)	osr1 (ENSIPUG00000002374)	diexf (ENSIPUG00000002388)	SYT14 (ENSIPUG00000002431)	sertad4 (ENSIPUG00000002455)	hif1a (ENSIPUG00000002474)	prkcha (ENSIPUG00000002545)	slc38a6 (ENSIPUG00000002579)
Characiphysae_b	ANCESTRAL SPECIES	252															ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00940000157581.a	ENSGT00940000155745	ENSGT00940000155979.g	ENSGT00940000160181.i
Electric eel	MODERN SPECIES	118	rtf1 (ENSEEEG00000022928)	golga5 (ENSEEEG00000022932)	trip11 (ENSEEEG00000022934)	fbln5 (ENSEEEG00000022964)	plek2 (ENSEEEG00000022966)	si:ch211-10a23.2 (ENSEEEG00000022968)	zfyve26 (ENSEEEG00000022971)	rdh12 (ENSEEEG00000022973)	vti1b (ENSEEEG00000022974)	arg2 (ENSEEEG00000022975)	KCNF1 (ENSEEEG00000022976)	si:dkey-18j18.3 (ENSEEEG00000022977)	rock2a (ENSEEEG00000022979)	slc66a3 (ENSEEEG00000023133)	sobpa (ENSEEEG00000023135)	pdss2 (ENSEEEG00000023139) #22	bend3 (ENSEEEG00000023141) #23	mtres1 (ENSEEEG00000023144) #24	matn3b (ENSEEEG00000023146)	wdr35 (ENSEEEG00000023148)	kcns3a (ENSEEEG00000023152)	rdh14a (ENSEEEG00000023153)	nt5c1ba (ENSEEEG00000023156)	osr1 (ENSEEEG00000023158)	utp25 (ENSEEEG00000023159)	SYT14 (ENSEEEG00000023160)	ENSEEEG00000023162	hif1aa (ENSEEEG00000023163)	prkcha (ENSEEEG00000023164)	slc38a6 (ENSEEEG00000023167)	trmt5 (ENSEEEG00000023168)
Characoidei	ANCESTRAL SPECIES	115															ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00940000157581.a	ENSGT00940000155745	ENSGT00940000155979.g	ENSGT00940000160181.i	ENSGT00940000158993	ENSGT00390000000709	ENSGT00940000159420	ENSGT00530000063876.a	ENSGT00940000156982	ENSGT00940000153304.B	ENSGT00390000002319	ENSGT00940000167410	ENSGT00940000154832.db.b
Red-bellied piranha	MODERN SPECIES	321	fbln5 (ENSPNAG00000013422)	TC2N (ENSPNAG00000013402)	plek2 (ENSPNAG00000013391)	si:ch211-10a23.2 (ENSPNAG00000013354)	zfyve26 (ENSPNAG00000013325)	rdh12 (ENSPNAG00000013212)	vti1b (ENSPNAG00000013208)	arg2 (ENSPNAG00000013195)	KCNF1 (ENSPNAG00000002610)	ENSPNAG00000002601	si:dkey-18j18.3 (ENSPNAG00000002599)	rock2a (ENSPNAG00000013168)	ENSPNAG00000013107	slc66a3 (ENSPNAG00000013095)	sobpa (ENSPNAG00000013076)	pdss2 (ENSPNAG00000013018) #22	bend3 (ENSPNAG00000012991) #23	mtres1 (ENSPNAG00000012980) #24
Mexicana tetra	MODERN SPECIES	17	trip11 (ENSAMXG00000021047)	fbln5 (ENSAMXG00000021074)	TC2N (ENSAMXG00000021100)	plek2 (ENSAMXG00000021117)	si:ch211-10a23.2 (ENSAMXG00000032461)	zfyve26 (ENSAMXG00000021142)	rdh12 (ENSAMXG00000021155)	vti1b (ENSAMXG00000037468)	arg2 (ENSAMXG00000031756)	KCNF1 (ENSAMXG00000039089)	si:dkey-18j18.3 (ENSAMXG00000021199)	ENSAMXG00000043463	rock2a (ENSAMXG00000021207)	slc66a3 (ENSAMXG00000030208)	sobpa (ENSAMXG00000021220)	pdss2 (ENSAMXG00000021223) #22	bend3 (ENSAMXG00000021225) #23	mtres1 (ENSAMXG00000032830) #24	matn3b (ENSAMXG00000021233)	wdr35 (ENSAMXG00000021236)	kcns3a (ENSAMXG00000025019)	rdh14a (ENSAMXG00000035074)	ENSAMXG00000031055	osr1 (ENSAMXG00000021239)	ENSAMXG00000031936	ENSAMXG00000040318	utp25 (ENSAMXG00000021243)	SYT14 (ENSAMXG00000021250)	SERTAD4 (ENSAMXG00000036453)	hif1aa (ENSAMXG00000039550)	prkcha (ENSAMXG00000031671)
Cyprinoidei	ANCESTRAL SPECIES	38	ENSGT00940000158774	ENSGT00390000009196	ENSGT00940000157229	ENSGT00940000164928	ENSGT00920000149143	ENSGT00940000158191.a	ENSGT00950000183192.a.a	ENSGT00950000183195.b.a	ENSGT00730000111019.f	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT01030000234517.B.b	ENSGT00940000178564	ENSGT00940000153916.B	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	4	ENSGT00390000018470.a	ENSGT00710000106769.jb	ENSGT00940000158774.a	ENSGT00390000009196.b	ENSGT00940000157229.d	ENSGT00940000164928.b	ENSGT00920000149143.b	ENSGT00940000158191.a.a	ENSGT00950000183192.a.a.db.b	ENSGT00950000183195.b.a.k	ENSGT00940000160213.a.b	ENSGT00940000154459.B.b	ENSGT01030000234517.B.b.b	ENSGT00940000153916.B.u	ENSGT00940000154164.c.a.b	ENSGT00940000153498.B.b.e #22	ENSGT00390000010827.d #23	ENSGT00390000009366.v #24	ENSGT00940000157581.a.b	ENSGT00940000155745.f
Cyprininae_a	ANCESTRAL SPECIES	270	ENSGT00710000106769.jb	ENSGT00940000158774.a	ENSGT00390000009196.b	ENSGT00940000157229.d	ENSGT00940000164928.b	ENSGT00920000149143.b	ENSGT00940000158191.a.a	ENSGT00950000183192.a.a.db.b	ENSGT00950000183195.b.a.k	ENSGT00730000111019.f.b	ENSGT00940000160213.a.b	ENSGT00940000154459.B.b	ENSGT01030000234517.B.b.b	ENSGT00940000153916.B.u	ENSGT00940000154164.c.a.b	ENSGT00940000153498.B.b.e #22	ENSGT00390000010827.d #23	ENSGT00390000009366.v #24	ENSGT00940000157581.a.b	ENSGT00940000155745.f	ENSGT00940000155745.e.b	ENSGT00940000155979.g.l	ENSGT00940000160181.i.b	ENSGT00390000017767.b.a.t.b
Golden-line barbel	MODERN SPECIES	70	golga5 (ENSSGRG00000036013)	trip11 (ENSSGRG00000035869)	fbln5 (ENSSGRG00000035853)	TC2N (ENSSGRG00000035852)	plek2 (ENSSGRG00000035850)	si:ch211-10a23.2 (ENSSGRG00000035848)	rdh12 (ENSSGRG00000035844)	ENSSGRG00000035841	arg2 (ENSSGRG00000035749)	ENSSGRG00000035723	KCNF1 (ENSSGRG00000035722)	ENSSGRG00000035721	rock2a (ENSSGRG00000034889)	slc66a3 (ENSSGRG00000034872)	sobpa (ENSSGRG00000034870)	pdss2 (ENSSGRG00000034858) #22	bend3 (ENSSGRG00000034857) #23	mtres1 (ENSSGRG00000034856) #24	matn3b (ENSSGRG00000034850)	ENSSGRG00000034848	kcns3a (ENSSGRG00000034845)	rdh14a (ENSSGRG00000034844)	nt5c1ba (ENSSGRG00000034843)
Goldfish	MODERN SPECIES	4	ENSCARG00000005198	fbln5 (ENSCARG00000004823)	TC2N (ENSCARG00000004797)	plek2 (ENSCARG00000004782)	si:ch211-10a23.2 (ENSCARG00000004770)	zfyve26 (ENSCARG00000004713)	rdh12 (ENSCARG00000004672)	vti1b (ENSCARG00000004664)	arg2 (ENSCARG00000004616)	KCNF1 (ENSCARG00000004589)	si:dkey-18j18.3 (ENSCARG00000004583)	ENSCARG00000004577	rock2a (ENSCARG00000004037)	slc66a3 (ENSCARG00000003834)	sobpa (ENSCARG00000003793)	pdss2 (ENSCARG00000003768) #22	bend3 (ENSCARG00000003759) #23	mtres1 (ENSCARG00000003758) #24	prkcha (ENSCARG00000003746)	slc38a6 (ENSCARG00000003730)	trmt5 (ENSCARG00000003715)	mnat1 (ENSCARG00000003688)	six4a (ENSCARG00000003672)	six1a (ENSCARG00000003663)	ENSCARG00000003658	six6a (ENSCARG00000003653)	ppm1aa (ENSCARG00000003645)	dhrs7 (ENSCARG00000003638)	ENSCARG00000003583	pgam1a (ENSCARG00000003554)	mettl18 (ENSCARG00000003550)
Cyprininae	ANCESTRAL SPECIES	218												ENSGT01030000234517.B.b.a	ENSGT00940000178564	ENSGT00940000153916.B.v	ENSGT00940000154164.c.a.a	ENSGT00940000153498.B.b.f #22	ENSGT00390000010827.c #23	ENSGT00390000009366.u #24	ENSGT00940000157581.a.a	ENSGT00940000155745.e.a	ENSGT00940000155979.g.k	ENSGT00940000160181.i.a	ENSGT00390000017767.b.a.t.a	ENSGT00940000158993.k	ENSGT00390000000709.h	ENSGT00940000159420.c	ENSGT00530000063876.a.a	ENSGT00940000156774.jb.a	ENSGT00940000158220.o.b	ENSGT00940000156982.c	ENSGT00940000153304.B.d
Cyprininae_a	ANCESTRAL SPECIES	150	ENSGT00940000158774.b	ENSGT00390000009196.a	ENSGT00940000157229.c	ENSGT00940000164928.a	ENSGT00920000149143.a	ENSGT00940000158191.a.b	ENSGT00950000183192.a.a.db.a	ENSGT00950000183195.b.a.l	ENSGT00730000111019.f.a	ENSGT00940000160213.a.a	ENSGT00940000154459.B.a	ENSGT01030000234517.B.b.a	ENSGT00940000178564	ENSGT00940000153916.B.v	ENSGT00940000154164.c.a.a	ENSGT00940000153498.B.b.f #22	ENSGT00390000010827.c #23	ENSGT00390000009366.u #24	ENSGT00940000157581.a.a	ENSGT00940000155745.e.a	ENSGT00940000155979.g.k	ENSGT00940000160181.i.a	ENSGT00390000017767.b.a.t.a	ENSGT00940000158993.k	ENSGT00390000000709.h	ENSGT00940000159420.c	ENSGT00530000063876.a.a	ENSGT00940000156774.jb.a	ENSGT00940000158220.o.b	ENSGT00940000156982.c	ENSGT00940000153304.B.d
Common carp reference	MODERN SPECIES	48	trip11 (ENSCCRG00000066378)	fbln5 (ENSCCRG00000018586)	TC2N (ENSCCRG00000018610)	plek2 (ENSCCRG00000018808)	si:ch211-10a23.2 (ENSCCRG00000051635)	rdh12 (ENSCCRG00000070400)	zfyve26 (ENSCCRG00000018835)	vti1b (ENSCCRG00000020334)	arg2 (ENSCCRG00000062079)	ENSCCRG00000076401	ENSCCRG00000054402	ENSCCRG00000072420	rock2a (ENSCCRG00000047518)	slc66a3 (ENSCCRG00000070432)	sobpa (ENSCCRG00000047503)	pdss2 (ENSCCRG00000047568) #22	bend3 (ENSCCRG00000047587) #23	mtres1 (ENSCCRG00000047576) #24	matn3b (ENSCCRG00000047597)	wdr35 (ENSCCRG00000047620)	kcns3a (ENSCCRG00000071313)	nt5c1ba (ENSCCRG00000082898)	osr1 (ENSCCRG00000019202)	ENSCCRG00000045791	utp25 (ENSCCRG00000052414)	ENSCCRG00000062977	SERTAD4 (ENSCCRG00000065844)	hif1aa (ENSCCRG00000044316)	prkcha (ENSCCRG00000061888)	slc38a6 (ENSCCRG00000044331)	trmt5 (ENSCCRG00000033175)
Golden-line barbel	MODERN SPECIES	105	trip11 (ENSSGRG00000030216)	fbln5 (ENSSGRG00000030507)	TC2N (ENSSGRG00000030510)	plek2 (ENSSGRG00000030511)	si:ch211-10a23.2 (ENSSGRG00000030515)	rdh12 (ENSSGRG00000030522)	vti1b (ENSSGRG00000030523)	arg2 (ENSSGRG00000030525)	ENSSGRG00000030773	KCNF1 (ENSSGRG00000030774)	si:dkey-18j18.3 (ENSSGRG00000030775)	rock2a (ENSSGRG00000030821)	ENSSGRG00000033457	slc66a3 (ENSSGRG00000033458)	sobpa (ENSSGRG00000033537)	pdss2 (ENSSGRG00000033539) #22	bend3 (ENSSGRG00000033540) #23	mtres1 (ENSSGRG00000033541) #24	matn3b (ENSSGRG00000033542)	wdr35 (ENSSGRG00000033543)	kcns3a (ENSSGRG00000033712)	rdh14a (ENSSGRG00000033713)	nt5c1ba (ENSSGRG00000033714)	osr1 (ENSSGRG00000033718)	utp25 (ENSSGRG00000033723)	SYT14 (ENSSGRG00000033729)	ENSSGRG00000033734	SERTAD4 (ENSSGRG00000033736)	hif1aa (ENSSGRG00000033749)	prkcha (ENSSGRG00000034456)	slc38a6 (ENSSGRG00000034458)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	31	ENSCARG00000016984	ENSCARG00000017005	lhcgr (ENSCARG00000017091)	ENSCARG00000017176	ENSCARG00000017301	vip (ENSCARG00000018077)	fbxo5 (ENSCARG00000018093)	slc29a1a (ENSCARG00000018115)	ENSCARG00000018254	TMEM63B (ENSCARG00000018299)	ATE1 (ENSCARG00000018426)	fgfr2 (ENSCARG00000018959)	ENSCARG00000036212	marcksl1a (ENSCARG00000036220)	fgfr2 (ENSCARG00000036312)	pdss2 (ENSCARG00000038533) #22	bend3 (ENSCARG00000038542) #23	mtres1 (ENSCARG00000038554) #24	matn3b (ENSCARG00000038571)	wdr35 (ENSCARG00000038680)	kcns3a (ENSCARG00000038845)	fancl (ENSCARG00000038865)	vrk2 (ENSCARG00000038926)	ccdc85a (ENSCARG00000038984)	nsmce4a (ENSCARG00000039001)	ENSCARG00000039015	ENSCARG00000039100	ldb1a (ENSCARG00000039232)	KCNF1 (ENSCARG00000039478)	ENSCARG00000039483	arg2 (ENSCARG00000039526)
Goldfish	MODERN SPECIES	31	RIMS1 (ENSCARG00000010768)	asrgl1 (ENSCARG00000010677)	inaa (ENSCARG00000010665)	pcgf6 (ENSCARG00000010656)	polr1c (ENSCARG00000010548)	ldb1a (ENSCARG00000010138)	ENSCARG00000010091	ENSCARG00000010073	nsmce4a (ENSCARG00000010063)	ENSCARG00000010000	ly6pge (ENSCARG00000009982)	si:dkey-18j18.3 (ENSCARG00000009978)	rock2a (ENSCARG00000009893)	ENSCARG00000009866	sobpa (ENSCARG00000009853)	pdss2 (ENSCARG00000009847) #22	bend3 (ENSCARG00000009840) #23	mtres1 (ENSCARG00000009837) #24	matn3b (ENSCARG00000009807)	wdr35 (ENSCARG00000009784)	kcns3a (ENSCARG00000009777)	rdh14a (ENSCARG00000009774)	nt5c1ba (ENSCARG00000009771)	cxcl18a.1 (ENSCARG00000009768)	ENSCARG00000009762	ENSCARG00000009757	ENSCARG00000009752	paox (ENSCARG00000009747)	ENSCARG00000009741	zcchc24 (ENSCARG00000009735)	ppifa (ENSCARG00000009732)
Zebrafish	MODERN SPECIES	4	trip11 (ENSDARG00000078381)	fbln5 (ENSDARG00000039273)	TC2N (ENSDARG00000095067)	plek2 (ENSDARG00000012789)	si:ch211-10a23.2 (ENSDARG00000060656)	zfyve26 (ENSDARG00000040131)	rdh12 (ENSDARG00000018069)	vti1b (ENSDARG00000039270)	arg2 (ENSDARG00000039269)	ENSDARG00000039266	KCNF1 (ENSDARG00000027285)	si:dkey-18j18.3 (ENSDARG00000078140)	rock2a (ENSDARG00000017500)	slc66a3 (ENSDARG00000054251)	sobpa (ENSDARG00000054253)	pdss2 (ENSDARG00000012563) #22	bend3 (ENSDARG00000076903) #23	mtres1 (ENSDARG00000077614) #24	matn3b (ENSDARG00000069265)	wdr35 (ENSDARG00000069269)	kcns3a (ENSDARG00000006891)	rdh14a (ENSDARG00000039299)	nt5c1ba (ENSDARG00000018153)	osr1 (ENSDARG00000014091)	utp25 (ENSDARG00000017696)	SYT14 (ENSDARG00000010934)	SERTAD4 (ENSDARG00000089795)	hif1aa (ENSDARG00000006181)	prkcha (ENSDARG00000018382)	slc38a6 (ENSDARG00000054312)	trmt5 (ENSDARG00000069278)
Euteleosteomorpha	ANCESTRAL SPECIES	49	ENSGT00940000177852	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00590000083139.d.a	ENSGT00590000083139.d.b	ENSGT00940000154645.A	ENSGT00940000155646	ENSGT00940000160213.b	ENSGT00940000165355.a	ENSGT00940000165355.b	ENSGT01030000234517.C	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b
Acanthomorphata	ANCESTRAL SPECIES	7	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000166171	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00940000162520.g.a	ENSGT00390000015369	ENSGT00940000166933
Euacanthomorphacea	ANCESTRAL SPECIES	27	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000166171	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00940000162520.g.a	ENSGT00390000015369	ENSGT00940000166933	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583	ENSGT00390000002201
Pinecone sodierfish	MODERN SPECIES	14	ENSMMDG00005017205	ENSMMDG00005017203	supt7l (ENSMMDG00005017202)	LRFN2 (ENSMMDG00005017201)	ENSMMDG00005017045	spdya (ENSMMDG00005017036)	trmt61b (ENSMMDG00005017035)	wdr43 (ENSMMDG00005016982)	ENSMMDG00005016977	CLIP4 (ENSMMDG00005016972)	si:dkey-18j18.3 (ENSMMDG00005016970)	slc66a3 (ENSMMDG00005016969)	ENSMMDG00005016967	rock2a (ENSMMDG00005010307)	sobpa (ENSMMDG00005010225)	pdss2 (ENSMMDG00005010223) #22	bend3 (ENSMMDG00005010221) #23	mtres1 (ENSMMDG00005010219) #24	TMEM151B (ENSMMDG00005010218)	hdac10 (ENSMMDG00005010205)	DAAM2 (ENSMMDG00005010096)	ENSMMDG00005010071	kif6 (ENSMMDG00005010066)	KCNK16 (ENSMMDG00005010062)	ENSMMDG00005010058	kcnk5a (ENSMMDG00005010056)	rab3gap2 (ENSMMDG00005005564)	iars2 (ENSMMDG00005005476)	qrsl1 (ENSMMDG00005005455)	rtn4ip1 (ENSMMDG00005005436)	ENSMMDG00005005420
Percomorphaceae	ANCESTRAL SPECIES	26	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.b	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369	ENSGT00940000166933	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Tiger tail seahorse	MODERN SPECIES	251									ENSHCOG00000011135	ENSHCOG00000010414	ENSHCOG00000010383	ENSHCOG00000010367	slc66a3 (ENSHCOG00000010335)	rock2a (ENSHCOG00000010292)	sobpa (ENSHCOG00000010221)	pdss2 (ENSHCOG00000010113) #22	bend3 (ENSHCOG00000010084) #23	mtres1 (ENSHCOG00000010074) #24	TMEM151B (ENSHCOG00000010065)	ENSHCOG00000010061	utp25 (ENSHCOG00000010052)	ENSHCOG00000010038	ENSHCOG00000010014	ENSHCOG00000009990	ENSHCOG00000009938	adprs (ENSHCOG00000000307)	ENSHCOG00000000588	ENSHCOG00000009672	ENSHCOG00000009655	ENSHCOG00000000866	ENSHCOG00000009628
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.b	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474
Cyprinodontiformes	ANCESTRAL SPECIES	23	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00940000162520.g.b	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Aplocheiloidei	ANCESTRAL SPECIES	38	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Turquoise killifish	MODERN SPECIES	8												ENSNFUG00015014163	PQLC3 (ENSNFUG00015014346)	ROCK2A (ENSNFUG00015014384)	sobpa (ENSNFUG00015014464)	PDSS2 (ENSNFUG00015014519) #22	BEND3 (ENSNFUG00015014583) #23	mtres1 (ENSNFUG00015014593) #24	CU915814.1 (ENSNFUG00015014607)	DIEXF (ENSNFUG00015014621)	ENSNFUG00015014686	ENSNFUG00015014699	ENSNFUG00015014723	ENSNFUG00015014743	ADPRHL2 (ENSNFUG00015014785)	ENSNFUG00015014794	ENSNFUG00015014891	NRDE2 (ENSNFUG00015014970)	Nfu_g_1_007837 (ENSNFUG00015015030)	ttc7b (ENSNFUG00015015184)	fam177a1 (ENSNFUG00015015465)
Mangrove rivulus	MODERN SPECIES	89			SLC4A1AP (ENSKMAG00000009478)	supt7l (ENSKMAG00000009446)	LRFN2 (ENSKMAG00000009433)	ENSKMAG00000009421	spdya (ENSKMAG00000009382)	trmt61b (ENSKMAG00000009359)	wdr43 (ENSKMAG00000009301)	ENSKMAG00000009230	ENSKMAG00000009176	ENSKMAG00000009140	slc66a3 (ENSKMAG00000009110)	rock2a (ENSKMAG00000008964)	sobpa (ENSKMAG00000008887)	pdss2 (ENSKMAG00000008844) #22	bend3 (ENSKMAG00000008831) #23	mtres1 (ENSKMAG00000008820) #24	TMEM151B (ENSKMAG00000008807)	ENSKMAG00000008801	utp25 (ENSKMAG00000008780)	ENSKMAG00000008768	ENSKMAG00000008746	adprs (ENSKMAG00000008754)	ENSKMAG00000008676	TUBB4B (ENSKMAG00000008714)	NRDE2 (ENSKMAG00000008647)	ENSKMAG00000008616	ttc7b (ENSKMAG00000008484)	fam177a1 (ENSKMAG00000008430)	ppp2r3c (ENSKMAG00000008369)
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000179180	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000155397.a.a.c.a	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT01010000225077	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Poecilia	ANCESTRAL SPECIES	10	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000179180	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000155397.a.a.c.a	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT01010000225077	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
NAME_6	ANCESTRAL SPECIES	3	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000155397.a.a.c.a	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT01010000225077	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Sailfin molly	MODERN SPECIES	617															sobpa (ENSPLAG00000022563)	pdss2 (ENSPLAG00000022528) #22	bend3 (ENSPLAG00000022496) #23	mtres1 (ENSPLAG00000022492) #24	TMEM151B (ENSPLAG00000022486)	ENSPLAG00000022476	utp25 (ENSPLAG00000022464)	ENSPLAG00000022456	ENSPLAG00000000777	ENSPLAG00000022441	adprs (ENSPLAG00000022427)	ENSPLAG00000022414	NRDE2 (ENSPLAG00000022350)	ENSPLAG00000022338	ttc7b (ENSPLAG00000022318)	fam177a1 (ENSPLAG00000022257)	ppp2r3c (ENSPLAG00000022253)
Amazon molly	MODERN SPECIES	260	spdya (ENSPFOG00000011326)	spdya (ENSPFOG00000011342)	trmt61b (ENSPFOG00000011353)	ENSPFOG00000011345	wdr43 (ENSPFOG00000011371)	ENSPFOG00000011471	ENSPFOG00000022590	ENSPFOG00000011525	CLIP4 (ENSPFOG00000011775)	slc66a3 (ENSPFOG00000012041)	rock2a (ENSPFOG00000012091)	sobpa (ENSPFOG00000024528)	slc66a3 (ENSPFOG00000021671)	rock2a (ENSPFOG00000012199)	sobpa (ENSPFOG00000012779)	pdss2 (ENSPFOG00000012829) #22	bend3 (ENSPFOG00000012907) #23	mtres1 (ENSPFOG00000012913) #24	TMEM151B (ENSPFOG00000012925)	ENSPFOG00000020420	utp25 (ENSPFOG00000012932)	ENSPFOG00000012992	adprs (ENSPFOG00000013049)	ENSPFOG00000013111	NRDE2 (ENSPFOG00000013217)	ENSPFOG00000013289	ttc7b (ENSPFOG00000013343)	fam177a1 (ENSPFOG00000013620)	ppp2r3c (ENSPFOG00000013645)	PRORP (ENSPFOG00000013713)	psma6a (ENSPFOG00000013811)
Guppy	MODERN SPECIES	453	supt7l (ENSPREG00000004886)	LRFN2 (ENSPREG00000004903)	ENSPREG00000004915	ENSPREG00000004928	spdya (ENSPREG00000004938)	trmt61b (ENSPREG00000004948)	wdr43 (ENSPREG00000004959)	ENSPREG00000004975	ENSPREG00000004995	ENSPREG00000005011	CLIP4 (ENSPREG00000005043)	ENSPREG00000005077	slc66a3 (ENSPREG00000005084)	rock2a (ENSPREG00000005116)	sobpa (ENSPREG00000005227)	pdss2 (ENSPREG00000005275) #22	bend3 (ENSPREG00000005286) #23	mtres1 (ENSPREG00000005297) #24	TMEM151B (ENSPREG00000005318)	ENSPREG00000005334	utp25 (ENSPREG00000005340)	ENSPREG00000005386	adprs (ENSPREG00000005535)	ENSPREG00000005546	uggt1 (ENSPREG00000005619)	ENSPREG00000005818	ola1 (ENSPREG00000005840)	TRA2B (ENSPREG00000005879)	ENSPREG00000005907	pcnt (ENSPREG00000005947)	atg9a (ENSPREG00000006117)
Platyfish	MODERN SPECIES	10	supt7l (ENSXMAG00000018409)	ENSXMAG00000027775	ENSXMAG00000024474	LRFN2 (ENSXMAG00000018405)	ENSXMAG00000022244	ENSXMAG00000023526	spdya (ENSXMAG00000018401)	trmt61b (ENSXMAG00000018398)	wdr43 (ENSXMAG00000018379)	ENSXMAG00000018369	ALK (ENSXMAG00000009140)	CLIP4 (ENSXMAG00000009152)	slc66a3 (ENSXMAG00000009173)	rock2a (ENSXMAG00000009185)	sobpa (ENSXMAG00000009226)	pdss2 (ENSXMAG00000022672) #22	bend3 (ENSXMAG00000009242) #23	mtres1 (ENSXMAG00000029879) #24	TMEM151B (ENSXMAG00000009244)	ENSXMAG00000021816	utp25 (ENSXMAG00000009245)	ENSXMAG00000009266	ENSXMAG00000020926	ENSXMAG00000023507	ENSXMAG00000025634	adprs (ENSXMAG00000024411)	ENSXMAG00000009293	NRDE2 (ENSXMAG00000009320)	ENSXMAG00000009332	ttc7b (ENSXMAG00000009343)	fam177a1 (ENSXMAG00000009364)
NAME_4	ANCESTRAL SPECIES	97					ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.b	ENSGT00940000162520.g.a	ENSGT00390000015369.d	ENSGT00940000162520.h	ENSGT00390000015369.c.b	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474
Mummichog	MODERN SPECIES	2188	ENSFHEG00000000540	spdya (ENSFHEG00000021897)	trmt61b (ENSFHEG00000021881)	wdr43 (ENSFHEG00000021863)	ENSFHEG00000021856	ENSFHEG00000021838	ENSFHEG00000021693	ENSFHEG00000000531	ENSFHEG00000021673	ENSFHEG00000021659	slc66a3 (ENSFHEG00000021650)	ENSFHEG00000021637	ENSFHEG00000021616	ENSFHEG00000021594	sobpa (ENSFHEG00000021563)	pdss2 (ENSFHEG00000021530) #22	bend3 (ENSFHEG00000021495) #23	mtres1 (ENSFHEG00000021484) #24	TMEM151B (ENSFHEG00000021481)	utp25 (ENSFHEG00000021471)	ENSFHEG00000021461	ENSFHEG00000021449	adprs (ENSFHEG00000021421)	ENSFHEG00000021400	ENSFHEG00000021394	NRDE2 (ENSFHEG00000021385)	ENSFHEG00000021373	ttc7b (ENSFHEG00000000870)	fam177a1 (ENSFHEG00000021169)	ppp2r3c (ENSFHEG00000021118)	PRORP (ENSFHEG00000021082)
Sheepshead minnow	MODERN SPECIES	133	nusap1 (ENSCVAG00000022241)	ENSCVAG00000022272	ENSCVAG00000022281	chp1 (ENSCVAG00000022309)	lgmn (ENSCVAG00000022338)	PCNX1 (ENSCVAG00000022446)	med6 (ENSCVAG00000022478)	TTC9 (ENSCVAG00000022496)	MAP3K9 (ENSCVAG00000000579)	ENSCVAG00000022781	CLIP4 (ENSCVAG00000022804)	ENSCVAG00000022824	slc66a3 (ENSCVAG00000022833)	rock2a (ENSCVAG00000022919)	sobpa (ENSCVAG00000022929)	pdss2 (ENSCVAG00000022969) #22	bend3 (ENSCVAG00000022975) #23	mtres1 (ENSCVAG00000022979) #24	TMEM151B (ENSCVAG00000022986)	ENSCVAG00000022992	utp25 (ENSCVAG00000023004)	ENSCVAG00000023018	ENSCVAG00000023030	adprs (ENSCVAG00000023037)	ENSCVAG00000023044	ENSCVAG00000023058	ENSCVAG00000023086	NRDE2 (ENSCVAG00000023105)	ENSCVAG00000023126	ttc7b (ENSCVAG00000023291)	fam177a1 (ENSCVAG00000023316)
Oryzias	ANCESTRAL SPECIES	3	ENSGT00390000005743	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.h	ENSGT00940000162520.g.a	ENSGT00390000015369.d	ENSGT01030000235576.a.b	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Oryzias_b	ANCESTRAL SPECIES	44	ENSGT00390000005743	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.h	ENSGT00940000162520.g.a	ENSGT00390000015369.d	ENSGT01030000235576.a.b	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Javanese ricefish	MODERN SPECIES	14	ENSOJAG00000017735	ENSOJAG00000018277	ENSOJAG00000018297	LRFN2 (ENSOJAG00000018311)	ENSOJAG00000018364	spdya (ENSOJAG00000018376)	trmt61b (ENSOJAG00000018387)	wdr43 (ENSOJAG00000018480)	ENSOJAG00000018756	ENSOJAG00000018762	ENSOJAG00000018780	CLIP4 (ENSOJAG00000018838)	slc66a3 (ENSOJAG00000018864)	rock2a (ENSOJAG00000018887)	sobpa (ENSOJAG00000019622)	pdss2 (ENSOJAG00000019642) #22	bend3 (ENSOJAG00000019658) #23	mtres1 (ENSOJAG00000019667) #24	TMEM151B (ENSOJAG00000019682)	utp25 (ENSOJAG00000019703)	ENSOJAG00000019788	ENSOJAG00000019833	adprs (ENSOJAG00000019851)	ENSOJAG00000019898	ENSOJAG00000019904	ENSOJAG00000019930	NRDE2 (ENSOJAG00000019961)	ENSOJAG00000020038	ttc7b (ENSOJAG00000020109)	fam177a1 (ENSOJAG00000020601)	ppp2r3c (ENSOJAG00000020623)
Indian medaka	MODERN SPECIES		ENSOMEG00000009661	ENSOMEG00000009780	supt7l (ENSOMEG00000009818)	LRFN2 (ENSOMEG00000009832)	ENSOMEG00000009845	spdya (ENSOMEG00000009871)	trmt61b (ENSOMEG00000009895)	wdr43 (ENSOMEG00000009928)	ENSOMEG00000009950	ENSOMEG00000009960	ENSOMEG00000010054	CLIP4 (ENSOMEG00000010115)	slc66a3 (ENSOMEG00000010144)	rock2a (ENSOMEG00000010220)	sobpa (ENSOMEG00000010253)	pdss2 (ENSOMEG00000010302) #22	bend3 (ENSOMEG00000010338) #23	mtres1 (ENSOMEG00000010352) #24	TMEM151B (ENSOMEG00000010362)	ENSOMEG00000010376	utp25 (ENSOMEG00000010397)	ENSOMEG00000010426	ENSOMEG00000010449	ENSOMEG00000010506	adprs (ENSOMEG00000010543)	ENSOMEG00000010753	ENSOMEG00000000260	NRDE2 (ENSOMEG00000010890)	ENSOMEG00000010907	ttc7b (ENSOMEG00000011014)	fam177a1 (ENSOMEG00000011073)
Oryzias_a	ANCESTRAL SPECIES	29	ENSGT01060000248694	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT01070000255940	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a
Japanese Medaka HdrR	MODERN SPECIES	14	ENSORLG00000017274	ENSORLG00000027771	spdya (ENSORLG00000027512)	trmt61b (ENSORLG00000029149)	wdr43 (ENSORLG00000018236)	ENSORLG00000028014	ENSORLG00000027046	ENSORLG00000029224	ENSORLG00000022549	ENSORLG00000027405	ENSORLG00000018248	slc66a3 (ENSORLG00000018253)	rock2a (ENSORLG00000018255)	sobpa (ENSORLG00000029385)	ENSORLG00000023718	pdss2 (ENSORLG00000018892) #22	ENSORLG00000030281	bend3 (ENSORLG00000030483) #23	ENSORLG00000022894	mtres1 (ENSORLG00000019492) #24	ENSORLG00000014540	ENSORLG00000028184	ENSORLG00000026097	ENSORLG00000021983	utp25 (ENSORLG00000019107)	ENSORLG00000026140
Chinese medaka	MODERN SPECIES	1207							ENSOSIG00000023594	ENSOSIG00000023596	ENSOSIG00000010425	CLIP4 (ENSOSIG00000010426)	slc66a3 (ENSOSIG00000010427)	rock2a (ENSOSIG00000010469)	ENSOSIG00000015805	sobpa (ENSOSIG00000015807)	ENSOSIG00000015809	pdss2 (ENSOSIG00000015815) #22	bend3 (ENSOSIG00000015817) #23	mtres1 (ENSOSIG00000015819) #24	TMEM151B (ENSOSIG00000015820)	ENSOSIG00000015821	ENSOSIG00000015824	utp25 (ENSOSIG00000015826)	ENSOSIG00000015880
Ovalentaria_B	ANCESTRAL SPECIES	18	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Cichlidae	ANCESTRAL SPECIES	23	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT01090000260059.a.b.b.a.a.a.a.b.b.a.b	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h.f	ENSGT00940000162520.h.e	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00940000154394.b.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b
Nile tilapia	MODERN SPECIES	10	mrpl33 (ENSONIG00000036327)	ENSONIG00000019546	SLC4A1AP (ENSONIG00000019545)	supt7l (ENSONIG00000032572)	LRFN2 (ENSONIG00000038324)	ENSONIG00000031307	spdya (ENSONIG00000019542)	trmt61b (ENSONIG00000041929)	wdr43 (ENSONIG00000019540)	ENSONIG00000019537	rock2a (ENSONIG00000019531)	ENSONIG00000019535	ENSONIG00000028443	ENSONIG00000019533	sobpa (ENSONIG00000019530)	pdss2 (ENSONIG00000019529) #22	mtres1 (ENSONIG00000019527) #24	TMEM151B (ENSONIG00000019526)	utp25 (ENSONIG00000019525)	ENSONIG00000019523	ENSONIG00000035925	ENSONIG00000039786	ENSONIG00000038868	adprs (ENSONIG00000019521)	ENSONIG00000031573	NRDE2 (ENSONIG00000019512)	ENSONIG00000041731	ttc7b (ENSONIG00000019504)	fam177a1 (ENSONIG00000019503)	ppp2r3c (ENSONIG00000019502)	ENSONIG00000042139
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT01090000260059.a.b.b.a.a.a.a.b.b.a.b	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h.f	ENSGT00940000162520.h.e	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT01090000260059.a.b.b.a.a.a.a.b.b.a.b	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h.f	ENSGT00940000162520.h.e	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474
Burton s mouthbrooder	MODERN SPECIES	432									ENSHBUG00000017248	CLIP4 (ENSHBUG00000017203)	ENSHBUG00000017173	ENSHBUG00000017163	slc66a3 (ENSHBUG00000017153)	rock2a (ENSHBUG00000000510)	sobpa (ENSHBUG00000000499)	pdss2 (ENSHBUG00000016955) #22	bend3 (ENSHBUG00000016891) #23	mtres1 (ENSHBUG00000016877) #24	TMEM151B (ENSHBUG00000016869)	TMEM151B (ENSHBUG00000016859)	ENSHBUG00000016846	utp25 (ENSHBUG00000016835)	ENSHBUG00000016823	ENSHBUG00000016815	adprs (ENSHBUG00000016800)	ENSHBUG00000016773	ENSHBUG00000016755	NRDE2 (ENSHBUG00000016736)	ENSHBUG00000016723	ttc7b (ENSHBUG00000016704)	fam177a1 (ENSHBUG00000016602)
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000177705	ENSGT01090000260059.a.b.b.a.a.a.a.b.b.a.b	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b.a	ENSGT00940000162520.h.f	ENSGT00940000162520.g.b.b	ENSGT00940000162520.h.e	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b
Haplochromini_B	ANCESTRAL SPECIES	37	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00490000044642.a.a.a.a.a.b.a.a.a.g.b	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b.a.b	ENSGT00940000162520.h.f.b	ENSGT00940000162520.g.b.a.a	ENSGT00940000162520.h.f.a	ENSGT00940000162520.g.b.b	ENSGT00940000162520.h.e	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b.d
Eastern happy	MODERN SPECIES	10	supt7l (ENSACLG00000025824)	ENSACLG00000025822	ENSACLG00000025817	ENSACLG00000025800	LRFN2 (ENSACLG00000025794)	ENSACLG00000025788	trmt61b (ENSACLG00000025694)	spdya (ENSACLG00000025751)	wdr43 (ENSACLG00000025675)	ENSACLG00000025650	CLIP4 (ENSACLG00000025563)	ENSACLG00000025540	slc66a3 (ENSACLG00000025529)	rock2a (ENSACLG00000025432)	sobpa (ENSACLG00000025395)	pdss2 (ENSACLG00000025335) #22	bend3 (ENSACLG00000025331) #23	mtres1 (ENSACLG00000025315) #24	TMEM151B (ENSACLG00000025309)	TMEM151B (ENSACLG00000025306)	ENSACLG00000025300	utp25 (ENSACLG00000025295)	ENSACLG00000025283	ENSACLG00000025272	ENSACLG00000025263	ENSACLG00000025245	ENSACLG00000025241	ENSACLG00000025224	adprs (ENSACLG00000025218)	ENSACLG00000025189	ENSACLG00000025175
Zebra mbuna	MODERN SPECIES	1101	wdr35 (ENSMZEG00005009317)	kcns3a (ENSMZEG00005009263)	ENSMZEG00005009241	ENSMZEG00005009225	LRFN2 (ENSMZEG00005009212)	ENSMZEG00005009200	ENSMZEG00005009162	spdya (ENSMZEG00005009132)	trmt61b (ENSMZEG00005009108)	wdr43 (ENSMZEG00005009095)	ENSMZEG00005009060	CLIP4 (ENSMZEG00005008923)	slc66a3 (ENSMZEG00005009005)	rock2a (ENSMZEG00005008775)	sobpa (ENSMZEG00005008731)	pdss2 (ENSMZEG00005008691) #22	bend3 (ENSMZEG00005008676) #23	mtres1 (ENSMZEG00005008665) #24	TMEM151B (ENSMZEG00005008654)	TMEM151B (ENSMZEG00005008648)	ENSMZEG00005008643	utp25 (ENSMZEG00005008636)	ENSMZEG00005008621	ENSMZEG00005008605	ENSMZEG00005008597	ENSMZEG00005008587	ENSMZEG00005008577	ENSMZEG00005008573	ENSMZEG00005008407	adprs (ENSMZEG00005008382)	ENSMZEG00005008362
P. nyererei	MODERN SPECIES	381	SLC4A1AP (ENSPNYG00000000365)	supt7l (ENSPNYG00000000362)	ENSPNYG00000023133	LRFN2 (ENSPNYG00000023129)	ENSPNYG00000023123	spdya (ENSPNYG00000023109)	trmt61b (ENSPNYG00000023092)	wdr43 (ENSPNYG00000023080)	ENSPNYG00000023072	CLIP4 (ENSPNYG00000023053)	ENSPNYG00000023047	ENSPNYG00000023045	slc66a3 (ENSPNYG00000023041)	rock2a (ENSPNYG00000023013)	sobpa (ENSPNYG00000022999)	pdss2 (ENSPNYG00000022964) #22	bend3 (ENSPNYG00000022954) #23	mtres1 (ENSPNYG00000022947) #24	TMEM151B (ENSPNYG00000022941)	TMEM151B (ENSPNYG00000022937)	ENSPNYG00000022933	utp25 (ENSPNYG00000022925)	ENSPNYG00000022920	ENSPNYG00000022916	adprs (ENSPNYG00000022908)	ENSPNYG00000022888	ENSPNYG00000022880	NRDE2 (ENSPNYG00000022833)	ENSPNYG00000022800	ttc7b (ENSPNYG00000022777)	fam177a1 (ENSPNYG00000022771)
Lyretail cichlid	MODERN SPECIES	353	SLC4A1AP (ENSNBRG00000011279)	supt7l (ENSNBRG00000011253)	LRFN2 (ENSNBRG00000011233)	ENSNBRG00000011213	spdya (ENSNBRG00000011146)	trmt61b (ENSNBRG00000011097)	wdr43 (ENSNBRG00000011062)	ENSNBRG00000011006	ENSNBRG00000010989	ENSNBRG00000010984	ENSNBRG00000010972	ENSNBRG00000010960	slc66a3 (ENSNBRG00000010877)	rock2a (ENSNBRG00000010802)	sobpa (ENSNBRG00000010764)	pdss2 (ENSNBRG00000010658) #22	bend3 (ENSNBRG00000010648) #23	mtres1 (ENSNBRG00000010635) #24	TMEM151B (ENSNBRG00000010627)	TMEM151B (ENSNBRG00000010614)	utp25 (ENSNBRG00000010582)	ENSNBRG00000010530	adprs (ENSNBRG00000010466)	ENSNBRG00000010449	ENSNBRG00000010325	NRDE2 (ENSNBRG00000010184)	ENSNBRG00000010133	ttc7b (ENSNBRG00000010091)	fam177a1 (ENSNBRG00000010080)	ppp2r3c (ENSNBRG00000010050)	PRORP (ENSNBRG00000010019)
Midas cichlid	MODERN SPECIES	186	SLC4A1AP (ENSACIG00000010936)	supt7l (ENSACIG00000010921)	LRFN2 (ENSACIG00000010908)	ENSACIG00000010905	spdya (ENSACIG00000010888)	trmt61b (ENSACIG00000010860)	wdr43 (ENSACIG00000010675)	ENSACIG00000010657	ENSACIG00000010621	ENSACIG00000010601	ENSACIG00000010586	ENSACIG00000010574	slc66a3 (ENSACIG00000010555)	rock2a (ENSACIG00000010476)	sobpa (ENSACIG00000010454)	pdss2 (ENSACIG00000010387) #22
Pomacentridae	ANCESTRAL SPECIES	86	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Bicolor damselfish	MODERN SPECIES	272									ENSSPAG00000021064	ENSSPAG00000021086	ENSSPAG00000000020	ENSSPAG00000000033	slc66a3 (ENSSPAG00000000045)	rock2a (ENSSPAG00000000053)	sobpa (ENSSPAG00000000109)	pdss2 (ENSSPAG00000000135) #22	bend3 (ENSSPAG00000000176) #23	mtres1 (ENSSPAG00000000184) #24	TMEM151B (ENSSPAG00000000187)	ENSSPAG00000000204	utp25 (ENSSPAG00000000211)	ENSSPAG00000000312	ENSSPAG00000000354	ENSSPAG00000000376	adprs (ENSSPAG00000000397)	ENSSPAG00000000422	ENSSPAG00000000518	NRDE2 (ENSSPAG00000000539)	ENSSPAG00000000718	ttc7b (ENSSPAG00000000738)	fam177a1 (ENSSPAG00000000821)
Pomacentridae_A	ANCESTRAL SPECIES	76	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Amphiprion	ANCESTRAL SPECIES	68	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Clown anemonefish	MODERN SPECIES	2538																pdss2 (ENSAOCG00000019640) #22	bend3 (ENSAOCG00000001423) #23	mtres1 (ENSAOCG00000019566) #24	TMEM151B (ENSAOCG00000002685)	ENSAOCG00000001420	utp25 (ENSAOCG00000019536)	ENSAOCG00000019499	ENSAOCG00000019474	adprs (ENSAOCG00000019461)
Orange clownfish	MODERN SPECIES	9	SLC4A1AP (ENSAPEG00000023335)	supt7l (ENSAPEG00000000325)	ENSAPEG00000000379	LRFN2 (ENSAPEG00000000412)	ENSAPEG00000000441	spdya (ENSAPEG00000000454)	trmt61b (ENSAPEG00000000518)	wdr43 (ENSAPEG00000000552)	ENSAPEG00000000572	ENSAPEG00000000606	ENSAPEG00000000757	si:dkey-18j18.3 (ENSAPEG00000000764)	slc66a3 (ENSAPEG00000000793)	rock2a (ENSAPEG00000000856)	sobpa (ENSAPEG00000001035)	pdss2 (ENSAPEG00000001075) #22	bend3 (ENSAPEG00000001132) #23	mtres1 (ENSAPEG00000001145) #24	TMEM151B (ENSAPEG00000001201)	ENSAPEG00000001229	ENSAPEG00000001239	ENSAPEG00000001249	fntb (ENSAPEG00000001258)	ENSAPEG00000001286	ENSAPEG00000001290	ENSAPEG00000001300	ENSAPEG00000001336	adprs (ENSAPEG00000001365)	ENSAPEG00000001400	ENSAPEG00000001517	NRDE2 (ENSAPEG00000001711)
Spiny chromis	MODERN SPECIES	145										ENSAPOG00000009330	CLIP4 (ENSAPOG00000009381)	si:dkey-18j18.3 (ENSAPOG00000009402)	slc66a3 (ENSAPOG00000009437)	rock2a (ENSAPOG00000009562)	sobpa (ENSAPOG00000009651)	pdss2 (ENSAPOG00000009692) #22	bend3 (ENSAPOG00000009706) #23	mtres1 (ENSAPOG00000009725) #24	TMEM151B (ENSAPOG00000009743)	ENSAPOG00000009761
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Eupercaria	ANCESTRAL SPECIES	9	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Tetraodontidae	ANCESTRAL SPECIES	45	ENSGT00940000156087.b	ENSGT00390000016577.a	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00390000004923.A.c.b	ENSGT00940000166262	ENSGT00390000009361	ENSGT00940000165880.b	ENSGT01030000234513.A.a.a.a.b.d.b	ENSGT01010000222987	ENSGT00940000154383.b
Tetraodon	MODERN SPECIES	1	GPR68 (ENSTNIG00000008901)	PALS1 (ENSTNIG00000008902)	ENSTNIG00000008903	supt7l (ENSTNIG00000000868)	LRFN2 (ENSTNIG00000008904)	spdya (ENSTNIG00000008905)	trmt61b (ENSTNIG00000008906)	wdr43 (ENSTNIG00000008907)	ENSTNIG00000008908	ENSTNIG00000008909	CLIP4 (ENSTNIG00000008910)	slc66a3 (ENSTNIG00000008911)	rock2a (ENSTNIG00000008912)	ENSTNIG00000008913	ENSTNIG00000000612	pdss2 (ENSTNIG00000008914) #22	mtres1 (ENSTNIG00000001710) #24	TMEM151B (ENSTNIG00000008916)	utp25 (ENSTNIG00000008917)	ENSTNIG00000008918	adprs (ENSTNIG00000008919)	ENSTNIG00000008920	FNDC5 (ENSTNIG00000008921)	olig4 (ENSTNIG00000008922)	bsdc1 (ENSTNIG00000008923)	marcksl1a (ENSTNIG00000008924)	gjb9a (ENSTNIG00000008925)	ENSTNIG00000008926	ppp1r13ba (ENSTNIG00000003062)	ENSTNIG00000003061	ATP6V1C2 (ENSTNIG00000001145)
Fugu	MODERN SPECIES	11	ENSTRUG00000031617	supt7l (ENSTRUG00000009632)	LRFN2 (ENSTRUG00000009709)	ENSTRUG00000028301	ENSTRUG00000022302	spdya (ENSTRUG00000019515)	trmt61b (ENSTRUG00000022649)	wdr43 (ENSTRUG00000009764)	ENSTRUG00000010044	ENSTRUG00000029225	ENSTRUG00000010452	si:dkey-18j18.3 (ENSTRUG00000020237)	slc66a3 (ENSTRUG00000010722)	rock2a (ENSTRUG00000010769)	sobpa (ENSTRUG00000011030)	pdss2 (ENSTRUG00000011067) #22	bend3 (ENSTRUG00000011122) #23	mtres1 (ENSTRUG00000022825) #24	TMEM151B (ENSTRUG00000011127)	utp25 (ENSTRUG00000025056)	ENSTRUG00000030997	ENSTRUG00000011153	adprs (ENSTRUG00000011445)	FNDC5 (ENSTRUG00000012090)	FNDC5 (ENSTRUG00000032381)	bsdc1 (ENSTRUG00000012146)	marcksl1a (ENSTRUG00000020822)	gjb9a (ENSTRUG00000031407)	ENSTRUG00000030987	ptp4a2a (ENSTRUG00000012418)	ppp1r13ba (ENSTRUG00000027459)
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Ballan wrasse	MODERN SPECIES	191										ENSLBEG00000020594	CLIP4 (ENSLBEG00000020664)	si:dkey-18j18.3 (ENSLBEG00000020749)	slc66a3 (ENSLBEG00000020773)	rock2a (ENSLBEG00000020841)	sobpa (ENSLBEG00000020988)	pdss2 (ENSLBEG00000021080) #22	bend3 (ENSLBEG00000021118) #23	mtres1 (ENSLBEG00000021128) #24	TMEM151B (ENSLBEG00000021148)	ENSLBEG00000021169	utp25 (ENSLBEG00000021180)	ENSLBEG00000021204	ENSLBEG00000021226	ENSLBEG00000021256	adprs (ENSLBEG00000021277)	ENSLBEG00000021301	ENSLBEG00000021350	ENSLBEG00000021365	NRDE2 (ENSLBEG00000021428)	ENSLBEG00000021551	ttc7b (ENSLBEG00000021637)
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Gilthead seabream	MODERN SPECIES	7	ENSSAUG00010022623	ENSSAUG00010022621	ENSSAUG00010022615	ENSSAUG00010022613	LRFN2 (ENSSAUG00010022610)	ENSSAUG00010022607	spdya (ENSSAUG00010022604)	trmt61b (ENSSAUG00010022602)	wdr43 (ENSSAUG00010022429)	ENSSAUG00010022421	CLIP4 (ENSSAUG00010022413)	si:dkey-18j18.3 (ENSSAUG00010022410)	slc66a3 (ENSSAUG00010022408)	rock2a (ENSSAUG00010021718)	sobpa (ENSSAUG00010021688)	pdss2 (ENSSAUG00010021685) #22	bend3 (ENSSAUG00010021682) #23	mtres1 (ENSSAUG00010021681) #24	TMEM151B (ENSSAUG00010021680)	ENSSAUG00010021678	utp25 (ENSSAUG00010021676)	ENSSAUG00010021672	ENSSAUG00010021666	ENSSAUG00010021647	adprs (ENSSAUG00010021641)	ENSSAUG00010021635	ENSSAUG00010021631	NRDE2 (ENSSAUG00010021623)	ENSSAUG00010021607	ttc7b (ENSSAUG00010021564)	ENSSAUG00010021541
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	16	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583	ENSGT00390000002201
European seabass	MODERN SPECIES	2	ENSDLAG00005033439	SLC4A1AP (ENSDLAG00005020453)	supt7l (ENSDLAG00005027881)	ENSDLAG00005026421	ENSDLAG00005020474	ENSDLAG00005020493	spdya (ENSDLAG00005020481)	ENSDLAG00005020500	wdr43 (ENSDLAG00005020517)	ENSDLAG00005020655	C2orf50 (ENSDLAG00005020702)	ENSDLAG00005020706	ROCK2 (ENSDLAG00005020789)	ENSDLAG00005022748	sobpa (ENSDLAG00005022751)	ENSDLAG00005022782 #22	bend3 (ENSDLAG00005033360) #23	ENSDLAG00005032370	ENSDLAG00005022798	ENSDLAG00005022814	ENSDLAG00005022818	ENSDLAG00005034977	ENSDLAG00005022912	ENSDLAG00005034899	ENSDLAG00005027203	ENSDLAG00005022941	ENSDLAG00005028404	ENSDLAG00005023016	fam177a1 (ENSDLAG00005023186)	ppp2r3c (ENSDLAG00005023193)	PRORP (ENSDLAG00005023262)
Large yellow croaker	MODERN SPECIES	495	rbks (ENSLCRG00005014268)	mrpl33 (ENSLCRG00005014266)	ENSLCRG00005023588	ENSLCRG00005023587	supt7l (ENSLCRG00005023586)	LRFN2 (ENSLCRG00005023585)	ENSLCRG00005023584	spdya (ENSLCRG00005023583)	trmt61b (ENSLCRG00005023582)	wdr43 (ENSLCRG00005023569)	ENSLCRG00005023555	ENSLCRG00005023554	slc66a3 (ENSLCRG00005023553)	rock2a (ENSLCRG00005022975)	sobpa (ENSLCRG00005022963)	pdss2 (ENSLCRG00005022961) #22	bend3 (ENSLCRG00005022960) #23	mtres1 (ENSLCRG00005022959) #24	TMEM151B (ENSLCRG00005022958)	utp25 (ENSLCRG00005022957)	ENSLCRG00005022956	ENSLCRG00005022955	ENSLCRG00005022954	adprs (ENSLCRG00005022953)	ENSLCRG00005022950	ENSLCRG00005022949	NRDE2 (ENSLCRG00005022948)	ENSLCRG00005022947	ttc7b (ENSLCRG00005022525)	fam177a1 (ENSLCRG00005022515)	ppp2r3c (ENSLCRG00005022514)
Perciformes	ANCESTRAL SPECIES	12	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Cottioidei	ANCESTRAL SPECIES	8	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Lumpfish	MODERN SPECIES	14	ENSCLMG00005009838	supt7l (ENSCLMG00005009839)	ENSCLMG00005009840	LRFN2 (ENSCLMG00005009841)	ENSCLMG00005009844	spdya (ENSCLMG00005009849)	trmt61b (ENSCLMG00005009864)	wdr43 (ENSCLMG00005009865)	ENSCLMG00005009994	ENSCLMG00005009995	ENSCLMG00005009998	si:dkey-18j18.3 (ENSCLMG00005010012)	slc66a3 (ENSCLMG00005010014)	rock2a (ENSCLMG00005010027)	sobpa (ENSCLMG00005010152)	pdss2 (ENSCLMG00005010168) #22	bend3 (ENSCLMG00005010171) #23	mtres1 (ENSCLMG00005010172) #24	TMEM151B (ENSCLMG00005010174)	utp25 (ENSCLMG00005010179)	ENSCLMG00005010188	ENSCLMG00005010192	ENSCLMG00005010196	adprs (ENSCLMG00005010201)	ENSCLMG00005010207	ENSCLMG00005010217	NRDE2 (ENSCLMG00005010221)	ENSCLMG00005010226	ttc7b (ENSCLMG00005010278)	fam177a1 (ENSCLMG00005010574)	ppp2r3c (ENSCLMG00005010577)
Stickleback	MODERN SPECIES	15	babam2 (ENSGACG00000012929)	rbks (ENSGACG00000012914)	mrpl33 (ENSGACG00000012910)	ENSGACG00000012907	ENSGACG00000012898	supt7l (ENSGACG00000012880)	LRFN2 (ENSGACG00000012877)	spdya (ENSGACG00000012873)	trmt61b (ENSGACG00000012868)	wdr43 (ENSGACG00000012843)	ENSGACG00000012839	ENSGACG00000012823	slc66a3 (ENSGACG00000012819)	rock2a (ENSGACG00000012788)	sobpa (ENSGACG00000012782)	pdss2 (ENSGACG00000012773) #22	bend3 (ENSGACG00000012772) #23	TMEM151B (ENSGACG00000012771)	utp25 (ENSGACG00000012761)	ENSGACG00000012713	adprs (ENSGACG00000012707)	ENSGACG00000012698	ENSGACG00000012635	NRDE2 (ENSGACG00000012619)	ENSGACG00000012607	ttc7b (ENSGACG00000012589)	fam177a1 (ENSGACG00000012585)	ppp2r3c (ENSGACG00000012545)	PRORP (ENSGACG00000012540)	psma6a (ENSGACG00000012527)	nfkbiab (ENSGACG00000012514)
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Channel bull blenny	MODERN SPECIES	14	ENSCGOG00000005237	SLC4A1AP (ENSCGOG00000005238)	supt7l (ENSCGOG00000005242)	LRFN2 (ENSCGOG00000005244)	ENSCGOG00000005250	spdya (ENSCGOG00000005252)	trmt61b (ENSCGOG00000005254)	wdr43 (ENSCGOG00000005258)	ENSCGOG00000005515	CLIP4 (ENSCGOG00000005564)	si:dkey-18j18.3 (ENSCGOG00000005668)	slc66a3 (ENSCGOG00000005669)	rock2a (ENSCGOG00000005791)	ENSCGOG00000010497	sobpa (ENSCGOG00000010499)	pdss2 (ENSCGOG00000010500) #22	ENSCGOG00000010501	bend3 (ENSCGOG00000010502) #23	mtres1 (ENSCGOG00000010503) #24	mtres1 (ENSCGOG00000010505) #24	TMEM151B (ENSCGOG00000010507)	utp25 (ENSCGOG00000010508)	ENSCGOG00000010515	ENSCGOG00000010663	adprs (ENSCGOG00000010670)	ENSCGOG00000010672	ENSCGOG00000010676	ENSCGOG00000010696	ENSCGOG00000010705	ENSCGOG00000010708	ttc7b (ENSCGOG00000010748)
Pike perch	MODERN SPECIES	39	ENSSLUG00000012202	supt7l (ENSSLUG00000012197)	ENSSLUG00000012193	LRFN2 (ENSSLUG00000012187)	ENSSLUG00000012180	spdya (ENSSLUG00000012179)	trmt61b (ENSSLUG00000012175)	wdr43 (ENSSLUG00000012118)	ENSSLUG00000012084	ENSSLUG00000012079	CLIP4 (ENSSLUG00000012072)	si:dkey-18j18.3 (ENSSLUG00000012057)	slc66a3 (ENSSLUG00000012050)	rock2a (ENSSLUG00000005970)	sobpa (ENSSLUG00000005613)	pdss2 (ENSSLUG00000005596) #22	bend3 (ENSSLUG00000005591) #23	mtres1 (ENSSLUG00000011507) #24	TMEM151B (ENSSLUG00000011502)	utp25 (ENSSLUG00000011479)	ENSSLUG00000011473	ENSSLUG00000011469	ENSSLUG00000011460	adprs (ENSSLUG00000011450)	ENSSLUG00000011396	ENSSLUG00000011376	NRDE2 (ENSSLUG00000011349)	ENSSLUG00000011345	ttc7b (ENSSLUG00000011178)	fam177a1 (ENSSLUG00000011149)	ppp2r3c (ENSSLUG00000011129)
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Carangaria	ANCESTRAL SPECIES	10	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000162520.g.a	ENSGT00390000015369.c.a	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474
Seriola	ANCESTRAL SPECIES	3	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000159219.a	ENSGT00390000000709	ENSGT00940000162520.g.b	ENSGT00940000162520.h.m.a	ENSGT00940000162520.g.a	ENSGT00390000015369.c.a	ENSGT00940000166933	ENSGT00940000154394.b.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i
Greater amberjack	MODERN SPECIES	62	ENSSDUG00000018682	SLC4A1AP (ENSSDUG00000018659)	supt7l (ENSSDUG00000018644)	LRFN2 (ENSSDUG00000018637)	ENSSDUG00000018628	spdya (ENSSDUG00000018618)	trmt61b (ENSSDUG00000018591)	wdr43 (ENSSDUG00000018532)	ENSSDUG00000018515	ENSSDUG00000018479	ENSSDUG00000018388	si:dkey-18j18.3 (ENSSDUG00000018374)	slc66a3 (ENSSDUG00000018363)	rock2a (ENSSDUG00000018198)	sobpa (ENSSDUG00000018152)	pdss2 (ENSSDUG00000018117) #22	bend3 (ENSSDUG00000018114) #23	mtres1 (ENSSDUG00000018104) #24	TMEM151B (ENSSDUG00000018095)	ENSSDUG00000018091	utp25 (ENSSDUG00000018076)	ENSSDUG00000018053	ENSSDUG00000018047	adprs (ENSSDUG00000018020)	ENSSDUG00000017979	ENSSDUG00000017968	NRDE2 (ENSSDUG00000017948)	ENSSDUG00000017941	ttc7b (ENSSDUG00000017860)	fam177a1 (ENSSDUG00000017841)	ppp2r3c (ENSSDUG00000017770)
Yellowtail amberjack	MODERN SPECIES	3213														rock2a (ENSSLDG00000024081)	sobpa (ENSSLDG00000024065)	pdss2 (ENSSLDG00000024043) #22	bend3 (ENSSLDG00000024019) #23	mtres1 (ENSSLDG00000024032) #24	TMEM151B (ENSSLDG00000024010)	ENSSLDG00000024007	utp25 (ENSSLDG00000023994)	ENSSLDG00000023988	ENSSLDG00000023985	ENSSLDG00000023978	adprs (ENSSLDG00000023967)	ENSSLDG00000023912	ENSSLDG00000023897	NRDE2 (ENSSLDG00000023798)	ENSSLDG00000023780	ttc7b (ENSSLDG00000023754)	fam177a1 (ENSSLDG00000023711)
Barramundi perch	MODERN SPECIES	131	supt7l (ENSLCAG00010021898)	LRFN2 (ENSLCAG00010021902)	ENSLCAG00010021904	ENSLCAG00010021908	spdya (ENSLCAG00010021916)	trmt61b (ENSLCAG00010021923)	wdr43 (ENSLCAG00010021930)	ENSLCAG00010021955	ENSLCAG00010021979	ENSLCAG00010022116	ENSLCAG00010022124	si:dkey-18j18.3 (ENSLCAG00010022132)	slc66a3 (ENSLCAG00010022135)	rock2a (ENSLCAG00010022162)	sobpa (ENSLCAG00010022241)	pdss2 (ENSLCAG00010022244) #22	bend3 (ENSLCAG00010022250) #23	mtres1 (ENSLCAG00010022254) #24	TMEM151B (ENSLCAG00010022256)	ENSLCAG00010022259	utp25 (ENSLCAG00010022262)	ENSLCAG00010022268	ENSLCAG00010022277	ENSLCAG00010022285	adprs (ENSLCAG00010022286)	ENSLCAG00010022290	ENSLCAG00010022304	ENSLCAG00010022311	NRDE2 (ENSLCAG00010022322)	ENSLCAG00010022328	ttc7b (ENSLCAG00010022340)
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00390000010130	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.h	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.b.a.b	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583
Tongue sole	MODERN SPECIES		slc66a3 (ENSCSEG00000016243)	rock2a (ENSCSEG00000016179)	sobpa (ENSCSEG00000016155)	bend3 (ENSCSEG00000016148) #23	mtres1 (ENSCSEG00000016137) #24	TMEM151B (ENSCSEG00000016131)	utp25 (ENSCSEG00000016118)	ENSCSEG00000016109	ENSCSEG00000016095	adprs (ENSCSEG00000016082)	FBXO33 (ENSCSEG00000016069)	gemin2 (ENSCSEG00000016057)	pnn (ENSCSEG00000016051)	ENSCSEG00000016048	ENSCSEG00000016038	pdss2 (ENSCSEG00000016013) #22	gjb9a (ENSCSEG00000016004)	ENSCSEG00000015996	ppp1r13ba (ENSCSEG00000015971)	ENSCSEG00000015928	PALS1 (ENSCSEG00000015895)	ENSCSEG00000015884	ENSCSEG00000015851	ENSCSEG00000015841	GPR68 (ENSCSEG00000015834)	DGLUCY (ENSCSEG00000015809)	APOB (ENSCSEG00000015782)	ldah (ENSCSEG00000015772)	alkbh1 (ENSCSEG00000015769)	slirp (ENSCSEG00000015766)	adck1 (ENSCSEG00000015733)
Turbot	MODERN SPECIES	8	SLC4A1AP (ENSSMAG00000015211)	supt7l (ENSSMAG00000015254)	ENSSMAG00000015281	ENSSMAG00000015295	spdya (ENSSMAG00000015301)	ENSSMAG00000015317	wdr43 (ENSSMAG00000015328)	ENSSMAG00000012898	ENSSMAG00000012210	ENSSMAG00000012162	C2orf50 (ENSSMAG00000031188)	ENSSMAG00000012148	ENSSMAG00000012139	ROCK2 (ENSSMAG00000012030)	sobpa (ENSSMAG00000011994)	pdss2 (ENSSMAG00000011964) #22	bend3 (ENSSMAG00000024135) #23	mtres1 (ENSSMAG00000011954) #24	ENSSMAG00000011940	ENSSMAG00000037124	ENSSMAG00000011901	ENSSMAG00000023453	ENSSMAG00000011860	ENSSMAG00000011845	ENSSMAG00000011745	ENSSMAG00000017567	ENSSMAG00000033678	ENSSMAG00000031003	ENSSMAG00000035007	ENSSMAG00000011671	ENSSMAG00000011642
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583	ENSGT00550000074807.d.a.b
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00390000001612	ENSGT00940000155320	ENSGT00390000005572	ENSGT00940000156417.g.a	ENSGT00390000002768.a	ENSGT00940000154524.b	ENSGT00940000154239.b	ENSGT00390000004254	ENSGT00530000069575	ENSGT00940000159280	ENSGT00940000157706	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00390000000709	ENSGT00940000162520.g.a	ENSGT00940000162520.g.b	ENSGT00390000015369.d	ENSGT00940000166933	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT00390000005524	ENSGT00950000182980.a.b.a.b.a.b	ENSGT00940000158474	ENSGT00390000016736.a.i	ENSGT00940000155583	ENSGT00550000074807.d.a.b
Climbing perch	MODERN SPECIES	3	ENSATEG00000011014	ENSATEG00000010986	supt7l (ENSATEG00000010956)	ENSATEG00000010927	ENSATEG00000010899	spdya (ENSATEG00000010843)	ENSATEG00000010826	wdr43 (ENSATEG00000010805)	ENSATEG00000026482	ENSATEG00000010693	ENSATEG00000010631	C2orf50 (ENSATEG00000010612)	ENSATEG00000026311	ROCK2 (ENSATEG00000010506)	sobpa (ENSATEG00000010439)	pdss2 (ENSATEG00000010396) #22	bend3 (ENSATEG00000010382) #23	mtres1 (ENSATEG00000010375) #24	ENSATEG00000010362	ENSATEG00000010354	ENSATEG00000028378	ENSATEG00000010347	ENSATEG00000010322	ENSATEG00000010299	ENSATEG00000010283	ENSATEG00000025502	ENSATEG00000010247	ENSATEG00000027865	ENSATEG00000010186	fam177a1 (ENSATEG00000010166)	ppp2r3c (ENSATEG00000010137)
Siamese fighting fish	MODERN SPECIES	12	rbks (ENSBSLG00000024347)	ENSBSLG00000024344	SLC4A1AP (ENSBSLG00000024332)	supt7l (ENSBSLG00000024330)	LRFN2 (ENSBSLG00000024326)	ENSBSLG00000024324	spdya (ENSBSLG00000024310)	trmt61b (ENSBSLG00000024300)	wdr43 (ENSBSLG00000024215)	ENSBSLG00000024187	CLIP4 (ENSBSLG00000024131)	si:dkey-18j18.3 (ENSBSLG00000024128)	slc66a3 (ENSBSLG00000024118)	rock2a (ENSBSLG00000021617)	sobpa (ENSBSLG00000021505)	pdss2 (ENSBSLG00000021501) #22	bend3 (ENSBSLG00000021478) #23	mtres1 (ENSBSLG00000021472) #24	TMEM151B (ENSBSLG00000021468)	utp25 (ENSBSLG00000021458)	ENSBSLG00000021446	adprs (ENSBSLG00000021438)	ENSBSLG00000021197	ENSBSLG00000021114	ENSBSLG00000021092	NRDE2 (ENSBSLG00000021071)	ENSBSLG00000020983	ttc7b (ENSBSLG00000019068)	fam177a1 (ENSBSLG00000018914)	ppp2r3c (ENSBSLG00000018778)	psma6a (ENSBSLG00000018536)
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000014341	ENSMAMG00000014287	supt7l (ENSMAMG00000014260)	ENSMAMG00000014244	ENSMAMG00000025725	ENSMAMG00000014215	spdya (ENSMAMG00000014163)	ENSMAMG00000014144	wdr43 (ENSMAMG00000014056)	ENSMAMG00000014018	ENSMAMG00000013956	C2orf50 (ENSMAMG00000013937)	ENSMAMG00000013930	ROCK2 (ENSMAMG00000013813)	sobpa (ENSMAMG00000013791)	pdss2 (ENSMAMG00000013730) #22	bend3 (ENSMAMG00000013708) #23	mtres1 (ENSMAMG00000028099) #24	ENSMAMG00000013667	ENSMAMG00000013646	ENSMAMG00000013631	ENSMAMG00000013607	ENSMAMG00000013591	ENSMAMG00000013558	ENSMAMG00000026240	ENSMAMG00000014021	ENSMAMG00000013452	ENSMAMG00000028594	ENSMAMG00000013346	fam177a1 (ENSMAMG00000028408)	ppp2r3c (ENSMAMG00000027886)
Cod	MODERN SPECIES	18	SLC4A1AP (ENSGMOG00000001925)	supt7l (ENSGMOG00000001686)	ENSGMOG00000028546	ENSGMOG00000001912	ENSGMOG00000035284	spdya (ENSGMOG00000001737)	ENSGMOG00000027535	wdr43 (ENSGMOG00000001695)	ENSGMOG00000022925	ENSGMOG00000014962	ENSGMOG00000017793	C2orf50 (ENSGMOG00000017778)	ENSGMOG00000017760	ROCK2 (ENSGMOG00000017704)	sobpa (ENSGMOG00000023539)	pdss2 (ENSGMOG00000017661) #22	bend3 (ENSGMOG00000017649) #23	mtres1 (ENSGMOG00000017626) #24	ENSGMOG00000017620	ENSGMOG00000017588	ENSGMOG00000025725	ENSGMOG00000017573	ENSGMOG00000017560	ENSGMOG00000036464	ENSGMOG00000017457	ENSGMOG00000015774	ENSGMOG00000033565	ENSGMOG00000015815	ppp2r3c (ENSGMOG00000017435)	PRORP (ENSGMOG00000017423)	nfkbiab (ENSGMOG00000017407)
Protacanthopterygii	ANCESTRAL SPECIES	108	ENSGT00390000011905	ENSGT00940000157581.b	ENSGT00940000153446.b	ENSGT00940000157575	ENSGT00950000182945.b.a.a.b.b.b	ENSGT00940000155646	ENSGT00940000160213.b	ENSGT00940000165355.a	ENSGT00940000165355.b	ENSGT01030000234517.C	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000160140.b	ENSGT00390000009688	ENSGT00590000083139.c
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	135	ENSGT00940000160193.c	ENSGT00940000157266.a.f	ENSGT00940000154245.B.a	ENSGT00390000018121.t	ENSGT00940000156728.v	ENSGT00910000144274	ENSGT00390000013159.d	ENSGT00940000153168.C.a.b.b	ENSGT00940000159219.a	ENSGT00950000182995.e.a.a.a.cc	ENSGT00390000007900.e	ENSGT00940000160213.a.c	ENSGT00940000154459.B	ENSGT01030000234517.B.b.k	ENSGT00940000154164.c.a.c	ENSGT00940000153498.B.b.g #22	ENSGT00390000010827.e #23	ENSGT00390000009366.s #24	ENSGT00940000160140.b.q	ENSGT00390000009688.g	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00950000182836.a.c	ENSGT00390000009189.n	ENSGT01020000230346.A.d	ENSGT00940000159502.i	ENSGT00940000156065.a.i	ENSGT00390000013444.a.a.y	ENSGT00940000156499.a.a.e	ENSGT01090000260005.a.b.a.b.a.a.b.b	ENSGT00940000154710.a.b.b.d
Huchen	MODERN SPECIES	85	ENSHHUG00000036805	GABRG1 (ENSHHUG00000036722)	ENSHHUG00000036633	GABRB1 (ENSHHUG00000036628)	commd8 (ENSHHUG00000036622)	atp10d (ENSHHUG00000036562)	dapp1 (ENSHHUG00000036543)	lamtor3 (ENSHHUG00000036467)	zgc:123321 (ENSHHUG00000036448)	odc1 (ENSHHUG00000036434)	nol10 (ENSHHUG00000036413)	KCNF1 (ENSHHUG00000036409)	si:dkey-18j18.3 (ENSHHUG00000036401)	rock2a (ENSHHUG00000036228)	sobpa (ENSHHUG00000036215)	pdss2 (ENSHHUG00000036194) #22	bend3 (ENSHHUG00000036191) #23	mtres1 (ENSHHUG00000036186) #24	GDF7 (ENSHHUG00000036118)	ldah (ENSHHUG00000036106)	ENSHHUG00000036089	ypel5 (ENSHHUG00000036079)	lclat1 (ENSHHUG00000036075)	lbh (ENSHHUG00000036059)	PSMC6 (ENSHHUG00000035954)	bmp4 (ENSHHUG00000035926)	DDHD1 (ENSHHUG00000035844)	fermt2 (ENSHHUG00000035755)
Salmoninae_a	ANCESTRAL SPECIES	8	ENSGT00940000160193.c	ENSGT00940000157266.a.f	ENSGT00940000154245.B.a	ENSGT00390000018121.t	ENSGT00940000156728.v	ENSGT00910000144274	ENSGT00390000013159.d	ENSGT00940000153168.C.a.b.b	ENSGT00940000159219.a	ENSGT00950000182995.e.a.a.a.cc	ENSGT00390000007900.e	ENSGT00940000160213.a.c	ENSGT00940000154459.B	ENSGT01030000234517.B.b.k	ENSGT00940000154164.c.a.c	ENSGT00940000153498.B.b.g #22	ENSGT00390000010827.e #23	ENSGT00390000009366.s #24	ENSGT00940000160140.b.q	ENSGT00390000009688.g	ENSGT00940000162520.g.b	ENSGT00950000182836.a.c	ENSGT00390000009189.m.b.a.b	ENSGT00390000009189.n	ENSGT01020000230346.A.d	ENSGT00940000159502.i	ENSGT00940000156065.a.i	ENSGT00390000013444.a.a.y	ENSGT00940000156499.a.a.e	ENSGT01090000260005.a.b.a.b.a.a.b.b	ENSGT00940000154710.a.b.b.d
Salmo	ANCESTRAL SPECIES	8	ENSGT00940000160193.c	ENSGT00940000157266.a.f	ENSGT00940000154245.B.a	ENSGT00390000018121.t	ENSGT00940000156728.v	ENSGT00910000144274	ENSGT00390000013159.d	ENSGT00940000153168.C.a.b.b	ENSGT00940000159219.a	ENSGT00950000182995.e.a.a.a.cc	ENSGT00390000007900.e	ENSGT00940000160213.a.c	ENSGT00940000154459.B	ENSGT01030000234517.B.b.k	ENSGT00940000154164.c.a.c	ENSGT00940000153498.B.b.g #22	ENSGT00390000010827.e #23	ENSGT00390000009366.s #24	ENSGT00390000013762.b.a.a.b.t	ENSGT00940000160140.b.q	ENSGT00390000009688.g	ENSGT00940000162520.g.b	ENSGT00940000162520.h	ENSGT00950000182836.a.c	ENSGT00390000009189.m.b.a.b	ENSGT00390000009189.n	ENSGT01020000230346.A.d	ENSGT00940000159502.i	ENSGT00940000156065.a.i	ENSGT00390000013444.a.a.y	ENSGT00940000156499.a.a.e
River trout	MODERN SPECIES	26	ENSSTUG00000036086	GABRG1 (ENSSTUG00000036072)	ENSSTUG00000035863	GABRB1 (ENSSTUG00000035832)	commd8 (ENSSTUG00000035819)	atp10d (ENSSTUG00000035000)	dapp1 (ENSSTUG00000034936)	lamtor3 (ENSSTUG00000034879)	zgc:123321 (ENSSTUG00000034856)	odc1 (ENSSTUG00000034815)	nol10 (ENSSTUG00000034769)	KCNF1 (ENSSTUG00000034755)	si:dkey-18j18.3 (ENSSTUG00000034746)	rock2a (ENSSTUG00000029880)	sobpa (ENSSTUG00000029765)	pdss2 (ENSSTUG00000034583) #22	bend3 (ENSSTUG00000034577) #23	mtres1 (ENSSTUG00000034564) #24	GDF7 (ENSSTUG00000034511)	ldah (ENSSTUG00000034460)	ENSSTUG00000034443	ENSSTUG00000034424	lclat1 (ENSSTUG00000034413)	lbh (ENSSTUG00000034408)	ENSSTUG00000034238	bmp4 (ENSSTUG00000034213)	DDHD1 (ENSSTUG00000033139)	fermt2 (ENSSTUG00000032757)	ENSSTUG00000032735	stxbp6 (ENSSTUG00000032725)	gjd2b (ENSSTUG00000032721)
Atlantic salmon	MODERN SPECIES		ENSSSAG00000015487	ENSSSAG00000110250	GABRB1 (ENSSSAG00000015602)	commd8 (ENSSSAG00000015639)	atp10d (ENSSSAG00000015812)	dapp1 (ENSSSAG00000040142)	lamtor3 (ENSSSAG00000040275)	ENSSSAG00000040331	ENSSSAG00000091043	ODC1 (ENSSSAG00000040444)	NOL10 (ENSSSAG00000040538)	KCNF1 (ENSSSAG00000040581)	cssa01h2orf50 (ENSSSAG00000040584)	rock2 (ENSSSAG00000040987)	sobpa (ENSSSAG00000051698)	pdss2 (ENSSSAG00000051717) #22	ENSSSAG00000104356	bend3 (ENSSSAG00000051724) #23	cssa01h6orf203 (ENSSSAG00000051730) #24	ENSSSAG00000051736	ENSSSAG00000108520	ENSSSAG00000106705	ENSSSAG00000051763	ENSSSAG00000099542	ENSSSAG00000051774	ENSSSAG00000051814	ENSSSAG00000051825	bmp4 (ENSSSAG00000051847)	ENSSSAG00000051888	ENSSSAG00000000215	stxbp6 (ENSSSAG00000000550)
Oncorhynchus	ANCESTRAL SPECIES	6	ENSGT00940000160193.c	ENSGT00940000157266.a.f	ENSGT00940000154245.B.a	ENSGT00390000018121.t	ENSGT00940000156728.v	ENSGT00910000144274	ENSGT00390000013159.d	ENSGT00940000153168.C.a.b.b	ENSGT00940000159219.a	ENSGT00950000182995.e.a.a.a.cc	ENSGT00390000007900.e	ENSGT00940000160213.a.c	ENSGT00940000154459.B	ENSGT01030000234517.B.b.k	ENSGT00940000154164.c.a.c	ENSGT00940000153498.B.b.g #22	ENSGT00390000010827.e #23	ENSGT00390000009366.s #24	ENSGT00940000160140.b.q	ENSGT00390000009688.g	ENSGT00940000162520.g.b	ENSGT00950000182836.a.c	ENSGT00390000009189.m.b.a.b	ENSGT01020000230346.A.d	ENSGT00940000159502.i	ENSGT00940000156065.a.i	ENSGT00390000013444.a.a.y	ENSGT00940000156499.a.a.e	ENSGT01090000260005.a.b.a.b.a.a.b.b	ENSGT00940000154710.a.b.b.d	ENSGT00940000156668.c
Oncorhynchus_a	ANCESTRAL SPECIES	10	ENSGT00390000014316.c.a.a	ENSGT00940000160193.c	ENSGT00940000157266.a.f	ENSGT00940000154245.B.a	ENSGT00390000018121.t	ENSGT00940000156728.v	ENSGT00910000144274	ENSGT00390000013159.d	ENSGT00940000159219.a	ENSGT00950000182995.e.a.a.a.cc	ENSGT00390000007900.e	ENSGT00940000160213.a.c	ENSGT00940000154459.B	ENSGT01030000234517.B.b.k	ENSGT00940000154164.c.a.c	ENSGT00940000153498.B.b.g #22	ENSGT00390000010827.e #23	ENSGT00390000009366.s #24	ENSGT00940000160140.b.q	ENSGT00390000009688.g	ENSGT00940000162520.g.b	ENSGT00950000182836.a.c	ENSGT00390000009189.m.b.a.a	ENSGT01020000230346.A.d	ENSGT00940000159502.i	ENSGT00940000156065.a.i	ENSGT00390000013444.a.a.y	ENSGT00940000156499.a.a.e	ENSGT01090000260005.a.b.a.b.a.a.b.b	ENSGT00940000154710.a.b.b.d	ENSGT00940000156668.c
Coho salmon	MODERN SPECIES	27	ENSOKIG00005024757	GABRG1 (ENSOKIG00005023520)	ENSOKIG00005023024	GABRB1 (ENSOKIG00005022975)	commd8 (ENSOKIG00005022943)	atp10d (ENSOKIG00005022796)	dapp1 (ENSOKIG00005022695)	ENSOKIG00005022650	ENSOKIG00005022605	ODC1 (ENSOKIG00005022584)	nol10 (ENSOKIG00005022499)	KCNF1 (ENSOKIG00005022475)	si:dkey-18j18.3 (ENSOKIG00005022466)	ROCK2 (ENSOKIG00005016710)	sobpa (ENSOKIG00005016481)	pdss2 (ENSOKIG00005016450) #22	bend3 (ENSOKIG00005016446) #23	mtres1 (ENSOKIG00005016441) #24	GDF7 (ENSOKIG00005016428)	ldah (ENSOKIG00005016419)	ENSOKIG00005016401	lclat1 (ENSOKIG00005016384)	ENSOKIG00005016303	BMP4 (ENSOKIG00005016277)	DDHD1 (ENSOKIG00005014924)	fermt2 (ENSOKIG00005014174)	stxbp6 (ENSOKIG00005014101)	ENSOKIG00005014087	ACTC1 (ENSOKIG00005014015)	aqr (ENSOKIG00005011047)	ENSOKIG00005010886
Chinook salmon	MODERN SPECIES	2	GNPDA2 (ENSOTSG00005014094)	GABRG1 (ENSOTSG00005014093)	ENSOTSG00005014085	GABRB1 (ENSOTSG00005014083)	commd8 (ENSOTSG00005014082)	atp10d (ENSOTSG00005014027)	lamtor3 (ENSOTSG00005014026)	dapp1 (ENSOTSG00005014022)	ENSOTSG00005014017	odc1 (ENSOTSG00005014013)	nol10 (ENSOTSG00005014004)	KCNF1 (ENSOTSG00005013996)	si:dkey-18j18.3 (ENSOTSG00005013995)	rock2a (ENSOTSG00005001200)	sobpa (ENSOTSG00005000814)	pdss2 (ENSOTSG00005000803) #22	bend3 (ENSOTSG00005000795) #23	mtres1 (ENSOTSG00005000746) #24	GDF7 (ENSOTSG00005022329)	ldah (ENSOTSG00005022328)	ENSOTSG00005022325	lclat1 (ENSOTSG00005022320)	lbh (ENSOTSG00005022318)	ENSOTSG00005022316	bmp4 (ENSOTSG00005022312)	DDHD1 (ENSOTSG00005021284)	fermt2 (ENSOTSG00005021153)	stxbp6 (ENSOTSG00005021152)	gjd2b (ENSOTSG00005021151)	actc2 (ENSOTSG00005021149)	aqr (ENSOTSG00005018464)
Rainbow trout	MODERN SPECIES	10	commd8 (ENSOMYG00000021606)	atp10d (ENSOMYG00000021562)	dapp1 (ENSOMYG00000021504)	lamtor3 (ENSOMYG00000021447)	ENSOMYG00000021438	ENSOMYG00000021420	ENSOMYG00000062315	ENSOMYG00000021413	NOL10 (ENSOMYG00000021369)	ENSOMYG00000021294	ENSOMYG00000021285	ENSOMYG00000055155	ENSOMYG00000009481	ENSOMYG00000058784	sobpa (ENSOMYG00000005575)	pdss2 (ENSOMYG00000005476) #22	bend3 (ENSOMYG00000044013) #23	mtres1 (ENSOMYG00000044011) #24	ENSOMYG00000043998	ENSOMYG00000043988	ENSOMYG00000043970	ENSOMYG00000069049	ENSOMYG00000043953	ENSOMYG00000043936	ENSOMYG00000070609	ENSOMYG00000043925	ENSOMYG00000065201	ENSOMYG00000043789	ENSOMYG00000043475	stxbp6 (ENSOMYG00000043370)	ENSOMYG00000043364
Salmoninae	ANCESTRAL SPECIES	108	ENSGT00950000182945.b.a.a.b.b.b.v	ENSGT00590000083139.d.b.a	ENSGT00590000083139.d.a	ENSGT00590000083139.d.b.b	ENSGT00940000154645.A.e.a	ENSGT00940000155646.k	ENSGT00940000160213.b	ENSGT00940000165355.a	ENSGT00940000165355.b	ENSGT00950000182995.e.a.a.a.bc	ENSGT00390000007900.f	ENSGT00940000160213.a.d	ENSGT00940000153916.B	ENSGT01030000234517.B.b.l	ENSGT00940000154164.c.a.d	ENSGT00940000153498.B.b.h #22	ENSGT00390000010827.f #23	ENSGT00390000009366.t #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000160140.b.r	ENSGT00390000009688.h	ENSGT00590000083139.c	ENSGT00390000013092	ENSGT00940000162520.g.a	ENSGT00940000154800.j	ENSGT00950000182836.a.d	ENSGT00390000009189.m	ENSGT00940000159502.j	ENSGT00940000156065.a.j	ENSGT00390000013444.a.a.z	ENSGT00940000156499.a.a.f
Huchen	MODERN SPECIES	124	ENSHHUG00000037537	ENSHHUG00000037538	GABRB1 (ENSHHUG00000037555)	commd8 (ENSHHUG00000037560)	ENSHHUG00000037570	atp10d (ENSHHUG00000037573)	lamtor3 (ENSHHUG00000037819)	zgc:123321 (ENSHHUG00000037843)	utp25 (ENSHHUG00000037850)	odc1 (ENSHHUG00000037856)	nol10 (ENSHHUG00000037870)	KCNF1 (ENSHHUG00000037884)	slc66a3 (ENSHHUG00000037889)	rock2a (ENSHHUG00000037915)	sobpa (ENSHHUG00000038476)	pdss2 (ENSHHUG00000038479) #22	bend3 (ENSHHUG00000038484) #23	ENSHHUG00000038487	TMEM151B (ENSHHUG00000038500)	GDF7 (ENSHHUG00000038506)	ENSHHUG00000038568	APOB (ENSHHUG00000038598)	hs1bp3 (ENSHHUG00000038612)	ENSHHUG00000038620	ypel5 (ENSHHUG00000038641)	lclat1 (ENSHHUG00000038652)	lbh (ENSHHUG00000038735)	ENSHHUG00000038750	bmp4 (ENSHHUG00000038767)	ENSHHUG00000038789
Salmoninae_a	ANCESTRAL SPECIES	42	ENSGT00950000182945.b.a.a.b.b.b.v	ENSGT00590000083139.d.a	ENSGT00590000083139.d.b.b	ENSGT00590000083139.d.b.a	ENSGT00940000154645.A.e.a	ENSGT00940000155646.k	ENSGT00940000160213.b	ENSGT00940000165355.a	ENSGT00940000165355.b	ENSGT00950000182995.e.a.a.a.bc	ENSGT00390000007900.f	ENSGT00940000160213.a.d	ENSGT00940000153916.B	ENSGT01030000234517.B.b.l	ENSGT00940000154164.c.a.d	ENSGT00940000153498.B.b.h #22	ENSGT00390000010827.f #23	ENSGT00390000009366.t #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000160140.b.r	ENSGT00390000009688.h	ENSGT00590000083139.c	ENSGT00390000013092	ENSGT00940000162520.g.a	ENSGT00940000154800.j	ENSGT00950000182836.a.d	ENSGT00390000009189.m.a	ENSGT00390000009189.m.b.a.a	ENSGT00940000159502.j	ENSGT00940000156065.a.j	ENSGT00390000013444.a.a.z
Oncorhynchus	ANCESTRAL SPECIES	35	ENSGT00950000182945.b.a.a.b.b.b.v	ENSGT00590000083139.d.a	ENSGT00590000083139.d.b.b	ENSGT00590000083139.d.b.a	ENSGT00940000154645.A.e.a	ENSGT00940000155646.k	ENSGT00940000160213.b	ENSGT00940000165355.a	ENSGT00940000165355.b	ENSGT00950000182995.e.a.a.a.bc	ENSGT00390000007900.f	ENSGT00940000160213.a.d	ENSGT00940000153916.B	ENSGT01030000234517.B.b.l	ENSGT00940000154164.c.a.d	ENSGT00940000153498.B.b.h #22	ENSGT00390000010827.f #23	ENSGT00390000009366.t #24	ENSGT00390000013762.b.a.a.b	ENSGT00940000160140.b.r	ENSGT00390000009688.h	ENSGT00590000083139.c	ENSGT00390000013092	ENSGT00940000162520.g.a	ENSGT00940000154800.j	ENSGT00390000009189.m.b.b	ENSGT00390000009189.m.b.a.a	ENSGT00940000159502.j	ENSGT00940000156065.a.j	ENSGT00390000013444.a.a.z	ENSGT00940000156499.a.a.f
Oncorhynchus_a	ANCESTRAL SPECIES	50	ENSGT00950000182945.b.a.a.b.b.b.v	ENSGT00590000083139.d.a	ENSGT00590000083139.d.b.b	ENSGT00590000083139.d.b.a	ENSGT00940000154645.A.e.a	ENSGT00940000155646.k	ENSGT00940000160213.b	ENSGT00940000165355.a	ENSGT00940000165355.b	ENSGT00950000182995.e.a.a.a.bc	ENSGT00390000007900.f	ENSGT00940000160213.a.d	ENSGT00940000153916.B	ENSGT01030000234517.B.b.l	ENSGT00940000154164.c.a.d	ENSGT00940000153498.B.b.h #22	ENSGT00390000010827.f #23	ENSGT01000000220218	ENSGT00390000013762.b.a.a.b	ENSGT00940000160140.b.r	ENSGT00390000009688.h	ENSGT00590000083139.c	ENSGT00390000013092	ENSGT00940000162520.g.a	ENSGT00940000154800.j	ENSGT00390000009189.m.b.b	ENSGT00940000159502.j	ENSGT00940000156065.a.j	ENSGT00390000013444.a.a.z	ENSGT00940000156499.a.a.f	ENSGT01090000260005.a.b.a.b.a.a.b.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	42	rrh (ENSOTSG00005045855)	ENSOTSG00005045854	ENSOTSG00005045655	GABRB1 (ENSOTSG00005045575)	commd8 (ENSOTSG00005045574)	atp10d (ENSOTSG00005044630)	lamtor3 (ENSOTSG00005044620)	zgc:123321 (ENSOTSG00005044619)	utp25 (ENSOTSG00005044615)	odc1 (ENSOTSG00005044614)	nol10 (ENSOTSG00005044613)	KCNF1 (ENSOTSG00005044612)	slc66a3 (ENSOTSG00005044611)	rock2a (ENSOTSG00005043979)	sobpa (ENSOTSG00005043975)	pdss2 (ENSOTSG00005043971) #22	bend3 (ENSOTSG00005043969) #23	ENSOTSG00005043968	TMEM151B (ENSOTSG00005043967)	GDF7 (ENSOTSG00005043966)	ldah (ENSOTSG00005043874)	APOB (ENSOTSG00005043872)	hs1bp3 (ENSOTSG00005043866)	ENSOTSG00005043865	ypel5 (ENSOTSG00005043864)	lbh (ENSOTSG00005043863)	zgc:92040 (ENSOTSG00005043862)	ENSOTSG00005043860	ENSOTSG00005043859	ENSOTSG00005043857	PRR12 (ENSOTSG00005043856)
Chinook salmon	MODERN SPECIES	2934	enpep (ENSOTSG00005033277)	rrh (ENSOTSG00005033272)	ENSOTSG00005033269	ENSOTSG00005032438	GABRB1 (ENSOTSG00005032152)	commd8 (ENSOTSG00005032151)	atp10d (ENSOTSG00005031573)	lamtor3 (ENSOTSG00005042521)	zgc:123321 (ENSOTSG00005042519)	utp25 (ENSOTSG00005042517)	odc1 (ENSOTSG00005042515)	nol10 (ENSOTSG00005042514)	KCNF1 (ENSOTSG00005042512)	slc66a3 (ENSOTSG00005042510)	rock2a (ENSOTSG00005030695)	pdss2 (ENSOTSG00005030652) #22	sobpa (ENSOTSG00005030649)	bend3 (ENSOTSG00005030648) #23	ENSOTSG00005030647	TMEM151B (ENSOTSG00005030645)	GDF7 (ENSOTSG00005030644)	ldah (ENSOTSG00005030546)	APOB (ENSOTSG00005030545)	hs1bp3 (ENSOTSG00005030544)	ENSOTSG00005030543	ypel5 (ENSOTSG00005030542)	lbh (ENSOTSG00005030541)
Coho salmon	MODERN SPECIES	5	rrh (ENSOKIG00005014295)	zgc:162509 (ENSOKIG00005014291)	ENSOKIG00005013796	GABRB1 (ENSOKIG00005013514)	commd8 (ENSOKIG00005013490)	ATP10D (ENSOKIG00005012804)	lamtor3 (ENSOKIG00005012718)	zgc:123321 (ENSOKIG00005012708)	utp25 (ENSOKIG00005012686)	odc1 (ENSOKIG00005012678)	ENSOKIG00005012665	KCNF1 (ENSOKIG00005012652)	slc66a3 (ENSOKIG00005012641)	rock2a (ENSOKIG00005006313)	sobpa (ENSOKIG00005005829)	pdss2 (ENSOKIG00005005789) #22	bend3 (ENSOKIG00005005776) #23	ENSOKIG00005005759	TMEM151B (ENSOKIG00005005753)	GDF7 (ENSOKIG00005005746)	ENSOKIG00005005729	ENSOKIG00005005723	APOB (ENSOKIG00005005631)	hs1bp3 (ENSOKIG00005005588)	ENSOKIG00005005577	YPEL5 (ENSOKIG00005005569)	lbh (ENSOKIG00005005546)	bmp4 (ENSOKIG00005005521)	DDHD1 (ENSOKIG00005005417)	FERMT2 (ENSOKIG00005004499)	stxbp6 (ENSOKIG00005004235)
Rainbow trout	MODERN SPECIES	17	ENSOMYG00000033407	ENSOMYG00000076741	ENSOMYG00000033464	GABRB1 (ENSOMYG00000034072)	ENSOMYG00000070289	commd8 (ENSOMYG00000034341)	ATP10D (ENSOMYG00000034681)	MK1I1 (ENSOMYG00000036352)	ENSOMYG00000036389	ENSOMYG00000036412	ENSOMYG00000036468	KCNF1 (ENSOMYG00000036488)	SLC66A3 (ENSOMYG00000036503)	ROCK2 (ENSOMYG00000037255)	sobpa (ENSOMYG00000042282)	pdss2 (ENSOMYG00000042311) #22	bend3 (ENSOMYG00000042322) #23	mtres1 (ENSOMYG00000042327) #24	ENSOMYG00000042331	GDF7 (ENSOMYG00000042334)	ENSOMYG00000042344	APOB (ENSOMYG00000042381)	ENSOMYG00000042408	ENSOMYG00000042413	ENSOMYG00000042419	ENSOMYG00000068727	ENSOMYG00000042430	ENSOMYG00000042437	ENSOMYG00000042439	ENSOMYG00000059630	ENSOMYG00000042492
Salmo	ANCESTRAL SPECIES	11	ENSGT01100000263524.I	ENSGT00390000008061	ENSGT00390000014316.c.a.b	ENSGT00940000160193.d	ENSGT00940000157266.a.e	ENSGT00940000154245.B.b	ENSGT00390000018121.s	ENSGT00940000156728.u	ENSGT00390000013159.c	ENSGT00940000153168.C.a.b.a	ENSGT00390000000709	ENSGT00950000182995.e.a.a.a.bc	ENSGT00940000160213.a.d	ENSGT01030000234517.B.b.l	ENSGT00940000154164.c.a.d	ENSGT00940000153498.B.b.h #22	ENSGT00390000010827.f #23	ENSGT00390000009366.t #24	ENSGT00390000013762.b.a.a.b.s	ENSGT00940000160140.b.r	ENSGT00590000083139.c	ENSGT00390000013092	ENSGT00940000162520.g.a	ENSGT00940000154800.j	ENSGT00950000182836.a.d	ENSGT00390000009189.m.a	ENSGT00940000159502.j	ENSGT00940000156065.a.j	ENSGT00390000013444.a.a.z	ENSGT00940000156499.a.a.f	ENSGT01090000260005.a.b.a.b.a.a.b.a
River trout	MODERN SPECIES	17	GABRG1 (ENSSTUG00000031505)	ENSSTUG00000031009	GABRB1 (ENSSTUG00000030950)	commd8 (ENSSTUG00000030927)	atp10d (ENSSTUG00000028940)	ENSSTUG00000028866	lamtor3 (ENSSTUG00000028839)	zgc:123321 (ENSSTUG00000028832)	ENSSTUG00000028825	utp25 (ENSSTUG00000028803)	odc1 (ENSSTUG00000028737)	KCNF1 (ENSSTUG00000028718)	slc66a3 (ENSSTUG00000028690)	rock2a (ENSSTUG00000020732)	sobpa (ENSSTUG00000020323)	pdss2 (ENSSTUG00000020280) #22	bend3 (ENSSTUG00000020279) #23	mtres1 (ENSSTUG00000018128) #24	TMEM151B (ENSSTUG00000018126)	GDF7 (ENSSTUG00000018081)	APOB (ENSSTUG00000017824)	hs1bp3 (ENSSTUG00000017775)	ENSSTUG00000017760	ypel5 (ENSSTUG00000017755)	lclat1 (ENSSTUG00000017726)	lbh (ENSSTUG00000017709)	ENSSTUG00000017704	bmp4 (ENSSTUG00000017696)	DDHD1 (ENSSTUG00000017667)	fermt2 (ENSSTUG00000017296)	stxbp6 (ENSSTUG00000017255)
Northern pike	MODERN SPECIES	14	btbd9 (ENSELUG00000000846)	glo1 (ENSELUG00000032833)	eprs1 (ENSELUG00000019744)	spdya (ENSELUG00000019771)	trmt61b (ENSELUG00000019782)	wdr43 (ENSELUG00000019806)	ALK (ENSELUG00000008935)	CLIP4 (ENSELUG00000008827)	olfcb1 (ENSELUG00000008740)	ENSELUG00000008727	LRFN2 (ENSELUG00000008703)	si:dkey-18j18.3 (ENSELUG00000027722)	slc66a3 (ENSELUG00000008658)	rock2a (ENSELUG00000008355)	sobpa (ENSELUG00000008124)	pdss2 (ENSELUG00000008000) #22	bend3 (ENSELUG00000007960) #23	mtres1 (ENSELUG00000031614) #24	GDF7 (ENSELUG00000007935)	ldah (ENSELUG00000007913)	APOB (ENSELUG00000007869)	ENSELUG00000007824	ENSELUG00000007784	ENSELUG00000000277	lclat1 (ENSELUG00000007674)	lbh (ENSELUG00000000271)	psmc6 (ENSELUG00000007599)	bmp4 (ENSELUG00000033797)	DDHD1 (ENSELUG00000007374)	fermt2 (ENSELUG00000007294)	stxbp6 (ENSELUG00000007210)
Osteoglossiformes	ANCESTRAL SPECIES	48	ENSGT00940000160140.b	ENSGT00950000185286	ENSGT00390000009688	ENSGT00590000083139.c	ENSGT00590000083139.d	ENSGT00940000154645.A	ENSGT00950000182995.e.a.a.a	ENSGT00390000007900	ENSGT00390000004263.b	ENSGT00940000155646	ENSGT00940000160213.a	ENSGT00940000154459.B	ENSGT00940000153916.B	ENSGT01030000234517.B.b	ENSGT00940000154164.c.a	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366 #24	ENSGT00550000074866	ENSGT00880000138028.b.b	ENSGT00940000155695.i.b	ENSGT00940000160188	ENSGT00510000050935	ENSGT00950000183092.b.b	ENSGT00950000183215.c.b	ENSGT00940000155187.A	ENSGT00940000164027	ENSGT00390000004173	ENSGT00950000183034.B	ENSGT00940000154531.cc	ENSGT00390000002053
Asian bonytongue	MODERN SPECIES	6	hs1bp3 (ENSSFOG00015028023)	GDF7 (ENSSFOG00015026533)	ldah (ENSSFOG00015003305)	APOB (ENSSFOG00015003291)	ENSSFOG00015003230	hpcal1 (ENSSFOG00015025652)	odc1 (ENSSFOG00015003183)	nol10 (ENSSFOG00015003083)	ATP6V1C2 (ENSSFOG00015003022)	pdia6 (ENSSFOG00015002978)	KCNF1 (ENSSFOG00015002954)	si:dkey-18j18.3 (ENSSFOG00015031625)	slc66a3 (ENSSFOG00015032661)	rock2a (ENSSFOG00015002704)	sobpa (ENSSFOG00015031132)	pdss2 (ENSSFOG00015002616) #22	bend3 (ENSSFOG00015002605) #23	mtres1 (ENSSFOG00015002599) #24	qrsl1 (ENSSFOG00015002547)	rtn4ip1 (ENSSFOG00015028543)	ENSSFOG00015002356	tonsl (ENSSFOG00015002326)	ENSSFOG00015002311	ENSSFOG00015002298	STAC (ENSSFOG00015032245)	mtfr1l (ENSSFOG00015027531)	ENSSFOG00015002185	selenon (ENSSFOG00015002125)	znf593 (ENSSFOG00015002115)	RLF (ENSSFOG00015002039)	DYNLT1 (ENSSFOG00015029878)
P. kingsleyae	MODERN SPECIES	297	ENSPKIG00000023311	LDAH (ENSPKIG00000023322)	ENSPKIG00000023333	ENSPKIG00000023346	APOB (ENSPKIG00000023371)	hpcal1 (ENSPKIG00000023413)	odc1 (ENSPKIG00000023433)	nol10 (ENSPKIG00000023459)	ATP6V1C2 (ENSPKIG00000023505)	pdia6 (ENSPKIG00000000066)	KCNF1 (ENSPKIG00000000077)	si:dkey-18j18.3 (ENSPKIG00000000085)	slc66a3 (ENSPKIG00000000100)	rock2a (ENSPKIG00000000147)	sobpa (ENSPKIG00000000247)	pdss2 (ENSPKIG00000000271) #22	bend3 (ENSPKIG00000000294) #23	mtres1 (ENSPKIG00000000305) #24	qrsl1 (ENSPKIG00000000328)	rtn4ip1 (ENSPKIG00000000366)	ENSPKIG00000000401	ENSPKIG00000000424	tonsl (ENSPKIG00000000446)	ENSPKIG00000000469	STAC (ENSPKIG00000000478)	ENSPKIG00000000503	mtfr1l (ENSPKIG00000000553)	selenon (ENSPKIG00000000584)	znf593 (ENSPKIG00000000619)	RLF (ENSPKIG00000000654)	zmpste24 (ENSPKIG00000000685)
Spotted gar	MODERN SPECIES	647	KLHL29 (ENSLOCG00000016613)	ENSLOCG00000016611	cep57l1 (ENSLOCG00000016609)	ENSLOCG00000016608	sesn1 (ENSLOCG00000016607)	ARMC2 (ENSLOCG00000016606)	FOXO3 (ENSLOCG00000016605)	afg1la (ENSLOCG00000016604)	snx3 (ENSLOCG00000016603)	nr2e1 (ENSLOCG00000016602)	OSTM1 (ENSLOCG00000016601)	ENSLOCG00000016599	sec63 (ENSLOCG00000016596)	SCML4 (ENSLOCG00000016595)	sobpa (ENSLOCG00000016593)	pdss2 (ENSLOCG00000016588) #22	bend3 (ENSLOCG00000016586) #23	mtres1 (ENSLOCG00000016585) #24	qrsl1 (ENSLOCG00000016582)	rtn4ip1 (ENSLOCG00000016579)	ENSLOCG00000016575	cep162 (ENSLOCG00000016570)	mrap2a (ENSLOCG00000016569)	CYB5R4 (ENSLOCG00000016563)	ENSLOCG00000016562	sim1a (ENSLOCG00000016561)	ASCC3 (ENSLOCG00000016550)	GRIK2 (ENSLOCG00000016542)	HACE1 (ENSLOCG00000016540)	lin28b (ENSLOCG00000016539)	bves (ENSLOCG00000016536)
Elephant shark	MODERN SPECIES	1551	ZNRF3 (ENSCMIG00000008198)	kremen1 (ENSCMIG00000008203)	SUSD2 (ENSCMIG00000008212)	ENSCMIG00000008217	ENSCMIG00000008221	ENSCMIG00000008224	slc35e4 (ENSCMIG00000008227)	ENSCMIG00000008228	sppl3 (ENSCMIG00000008246)	acads (ENSCMIG00000008290)	ENSCMIG00000008292	mlec (ENSCMIG00000008297)	cabp1a (ENSCMIG00000008302)	ENSCMIG00000008306	rnf10 (ENSCMIG00000008310)	pdss2 (ENSCMIG00000008316) #22	coq5 (ENSCMIG00000008328)	ENSCMIG00000008333	ENSCMIG00000008335	ENSCMIG00000008338	GATC (ENSCMIG00000008344)	ENSCMIG00000008346	ENSCMIG00000008348	bend3 (ENSCMIG00000008351) #23	mtres1 (ENSCMIG00000008352) #24	qrsl1 (ENSCMIG00000008358)	rtn4ip1 (ENSCMIG00000008378)	ENSCMIG00000008385	atg5 (ENSCMIG00000008396)	prdm1a (ENSCMIG00000008406)	prep (ENSCMIG00000008444)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000153498.B.b #22
Lamprey	MODERN SPECIES	1517					ENSPMAG00000001867	ENSPMAG00000001846	ENSPMAG00000001843	mrps25 (ENSPMAG00000001827)	ENSPMAG00000001822	ENSPMAG00000001820	KIF9 (ENSPMAG00000001803)	ENSPMAG00000001798	ENSPMAG00000001779	nrf1 (ENSPMAG00000001772)	slc35a2 (ENSPMAG00000001752)	pdss2 (ENSPMAG00000001740) #22	ENSPMAG00000001739
Ciona	ANCESTRAL SPECIES	386																ENSGT00940000153498.B.b #22	ENSGT00390000007284	ENSGT00390000016550	ENSGT00950000183018.b
Ciona intestinalis	MODERN SPECIES	246	ENSCING00000024596	ENSCING00000002548	ENSCING00000002549	ENSCING00000024269	ENSCING00000015910	ENSCING00000002560	ENSCING00000002563	ENSCING00000015963	ENSCING00000015965	ENSCING00000022052	ENSCING00000002593	ENSCING00000024393	rhag (ENSCING00000002595)	ENSCING00000023335	ENSCING00000016124	ENSCING00000002604 #22	ENSCING00000002605	ENSCING00000023588	ENSCING00000002606	ENSCING00000002615	ENSCING00000002626	ENSCING00000025009	ENSCING00000020384	ENSCING00000005792	ENSCING00000023306	ENSCING00000005794	ENSCING00000008090	ENSCING00000018941
Ciona savignyi	MODERN SPECIES	253	ENSCSAVG00000006092	ENSCSAVG00000006089	ENSCSAVG00000006069	ENSCSAVG00000006061	ENSCSAVG00000006059	ENSCSAVG00000005991	ENSCSAVG00000005980	ENSCSAVG00000005972	ENSCSAVG00000005900	ENSCSAVG00000005895	ENSCSAVG00000005892	ENSCSAVG00000005888	ENSCSAVG00000005882	ENSCSAVG00000005875	ENSCSAVG00000005872	ENSCSAVG00000005861 #22	ENSCSAVG00000005853	ENSCSAVG00000005845	ENSCSAVG00000005837	ENSCSAVG00000005836	ENSCSAVG00000005831	ENSCSAVG00000005824	ENSCSAVG00000005818	ENSCSAVG00000005815	ENSCSAVG00000005791	ENSCSAVG00000005607	ENSCSAVG00000005600	ENSCSAVG00000005435	ENSCSAVG00000004941	ENSCSAVG00000004938	ENSCSAVG00000004749
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153498.B.b #22
Fruitfly	MODERN SPECIES	18	CG32432 (FBgn0052432)	Sfp77F (FBgn0259972)	CG43931 (FBgn0264552)	CG11458 (FBgn0040637)	fng (FBgn0011591)	CG10589 (FBgn0037035)	Sems (FBgn0037036)	CG10588 (FBgn0037037)	CG11037 (FBgn0037038)	CG10587 (FBgn0037039)	CG12983 (FBgn0037040)	CG33287 (FBgn0053287)	CG33286 (FBgn0053286)	CG12984 (FBgn0037042)	skd (FBgn0003415)	Pdss2 (FBgn0037044) #22	CG10584 (FBgn0037045)	Polr3E (FBgn0028402)	CG10581 (FBgn0037046)	siz (FBgn0026179)	CG43072 (FBgn0262482)	ko (FBgn0020294)	CG33285 (FBgn0053285)	CG43938 (FBgn0264566)	CG33284 (FBgn0053284)	ICA69 (FBgn0037050)	CG10565 (FBgn0037051)	Ac78C (FBgn0024150)	chb (FBgn0021760)	AsnS (FBgn0270926)	CG42337 (FBgn0259239)
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153498.B.a ##22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153498.B.a ##22
Vertebrata	ANCESTRAL SPECIES	78																ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002
Cyclostomata	ANCESTRAL SPECIES	96																ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002
Lamprey	MODERN SPECIES	1327																pdss1 (ENSPMAG00000009857) ##22	ENSPMAG00000009858
Hagfish	MODERN SPECIES	901													MPP7 (ENSEBUG00000000955)	ENSEBUG00000002426	ift80 (ENSEBUG00000004107)	pdss1 (ENSEBUG00000001738) ##22	abi1a (ENSEBUG00000011887)	ENSEBUG00000010542	ENSEBUG00000007408	ENSEBUG00000005994	MFSD11 (ENSEBUG00000004633)	ENSEBUG00000012366	ENSEBUG00000011430	eif3ba (ENSEBUG00000004379)	ENSEBUG00000012270
Gnathostomata	ANCESTRAL SPECIES	241											ENSGT00940000155063	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727
Euteleostomi	ANCESTRAL SPECIES	2	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806
Sarcopterygii	ANCESTRAL SPECIES		ENSGT00390000004450	ENSGT00390000004690.a.a	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156232.b	ENSGT00940000156625	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000015348	ENSGT00940000158582
Tetrapoda	ANCESTRAL SPECIES	7	ENSGT00390000004450	ENSGT00390000004690.a.a	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000015348	ENSGT00940000158582
Amniota	ANCESTRAL SPECIES	7	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Mammalia	ANCESTRAL SPECIES	4	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Platypus	MODERN SPECIES	4	SPAG6 (ENSOANG00000005697)	PIP4K2A (ENSOANG00000005696)	ARMC3 (ENSOANG00000005694)	ENSOANG00000005693	PTF1A (ENSOANG00000046208)	ENSOANG00000005692	KIAA1217 (ENSOANG00000006020)	ARHGAP21 (ENSOANG00000006022)	ENKUR (ENSOANG00000006023)	THNSL1 (ENSOANG00000006024)	GPR158 (ENSOANG00000041131)	MYO3A (ENSOANG00000006026)	GAD2 (ENSOANG00000006028)	APBB1IP (ENSOANG00000006030)	ENSOANG00000021394	PDSS1 (ENSOANG00000006032) ##22	ABI1 (ENSOANG00000006033)	ACBD5 (ENSOANG00000006034)	MASTL (ENSOANG00000006036)	YME1L1 (ENSOANG00000006037)	RAB18 (ENSOANG00000036374)	MKX (ENSOANG00000045734)	ODAD2 (ENSOANG00000006039)	MPP7 (ENSOANG00000006040)	WAC (ENSOANG00000006041)	BAMBI (ENSOANG00000006042)	ENSOANG00000006043	MAP3K8 (ENSOANG00000006044)	MTPAP (ENSOANG00000006046)	ENSOANG00000042849	SVIL (ENSOANG00000006048)
Theria	ANCESTRAL SPECIES		ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Marsupialia_b	ANCESTRAL SPECIES	10	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Diprotodontia	ANCESTRAL SPECIES	41							ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Diprotodontia_a	ANCESTRAL SPECIES	9							ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
koala	MODERN SPECIES	38														APBB1IP (ENSPCIG00000029418)	ENSPCIG00000014625	PDSS1 (ENSPCIG00000014621) ##22	ABI1 (ENSPCIG00000014619)	ENSPCIG00000034981	ACBD5 (ENSPCIG00000029417)	MASTL (ENSPCIG00000029416)	YME1L1 (ENSPCIG00000029415)	ENSPCIG00000036324	ENSPCIG00000005468	RAB18 (ENSPCIG00000028705)	MKX (ENSPCIG00000028704)	ODAD2 (ENSPCIG00000028701)	MPP7 (ENSPCIG00000028698)	WAC (ENSPCIG00000028691)	BAMBI (ENSPCIG00000028689)	MAP3K8 (ENSPCIG00000018262)	MTPAP (ENSPCIG00000018263)
Common wonbat	MODERN SPECIES	1086							ARHGAP21 (ENSVURG00010024450)	PRTFDC1 (ENSVURG00010024447)	ENKUR (ENSVURG00010024445)	THNSL1 (ENSVURG00010024442)	GPR158 (ENSVURG00010024438)	ENSVURG00010024434	ENSVURG00010024430	GAD2 (ENSVURG00010024424)	APBB1IP (ENSVURG00010024419)	PDSS1 (ENSVURG00010024414) ##22	ABI1 (ENSVURG00010024410)	ACBD5 (ENSVURG00010024404)	MASTL (ENSVURG00010024399)	YME1L1 (ENSVURG00010024385)	ENSVURG00010024378	ENSVURG00010024374	MKX (ENSVURG00010024370)	ODAD2 (ENSVURG00010024367)	MPP7 (ENSVURG00010024366)	WAC (ENSVURG00010024358)	BAMBI (ENSVURG00010024352)	MAP3K8 (ENSVURG00010024347)	MTPAP (ENSVURG00010024344)	ENSVURG00010024343	ENSVURG00010024338
Wallaby	MODERN SPECIES	5528																ENSMEUG00000002579 ##22	ENSMEUG00000002592
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000022275	PTF1A (ENSSHAG00000021518)	ENSSHAG00000004256	OTUD1 (ENSSHAG00000022057)	KIAA1217 (ENSSHAG00000017624)	ARHGAP21 (ENSSHAG00000017433)	PRTFDC1 (ENSSHAG00000017076)	ENKUR (ENSSHAG00000016922)	THNSL1 (ENSSHAG00000016883)	GPR158 (ENSSHAG00000024866)	ENSSHAG00000027563	MYO3A (ENSSHAG00000013946)	GAD2 (ENSSHAG00000013305)	APBB1IP (ENSSHAG00000012142)	ENSSHAG00000011815	PDSS1 (ENSSHAG00000011535) ##22	ENSSHAG00000011206	ENSSHAG00000010500	ENSSHAG00000010324	ENSSHAG00000029044	ENSSHAG00000009522	ENSSHAG00000008836	ENSSHAG00000027130	MKX (ENSSHAG00000032197)	ODAD2 (ENSSHAG00000013953)	MPP7 (ENSSHAG00000012597)	WAC (ENSSHAG00000010908)	ENSSHAG00000029399	ENSSHAG00000001973	MTPAP (ENSSHAG00000001222)	ENSSHAG00000014509
Opossum	MODERN SPECIES	7	ENSMODG00000039733	ENSMODG00000008903	ARHGAP21 (ENSMODG00000008781)	PRTFDC1 (ENSMODG00000008740)	ENKUR (ENSMODG00000008730)	THNSL1 (ENSMODG00000024109)	GPR158 (ENSMODG00000024111)	ENSMODG00000044147	ENSMODG00000008687	ENSMODG00000028716	ENSMODG00000028877	ENSMODG00000027922	GAD2 (ENSMODG00000008626)	APBB1IP (ENSMODG00000008583)	ENSMODG00000036851	PDSS1 (ENSMODG00000008533) ##22	ABI1 (ENSMODG00000008499)	ACBD5 (ENSMODG00000008472)	MASTL (ENSMODG00000008423)	YME1L1 (ENSMODG00000008389)	ENSMODG00000008258	RAB18 (ENSMODG00000008253)	MKX (ENSMODG00000008244)	ENSMODG00000008232	MPP7 (ENSMODG00000008195)	WAC (ENSMODG00000008157)	ENSMODG00000029379	ENSMODG00000046890	BAMBI (ENSMODG00000008021)	MAP3K8 (ENSMODG00000007954)	MTPAP (ENSMODG00000007924)
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Boreoeutheria	ANCESTRAL SPECIES	23	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031	ENSGT00940000159227	ENSGT00940000158806
Euarchontoglires	ANCESTRAL SPECIES	23	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031	ENSGT00940000159227	ENSGT00940000158806
Primates	ANCESTRAL SPECIES	27	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.a	ENSGT00940000162459.c.b	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000015348	ENSGT00940000158582
Strepsirrhini	ANCESTRAL SPECIES	30	ENSGT00940000161673	ENSGT00940000161000	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918.e	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.b	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Lemuriformes	ANCESTRAL SPECIES	42	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918.f	ENSGT00940000155918.e	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.b	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Mouse lemur	MODERN SPECIES	17	ARMC3 (ENSMICG00000012287)	MSRB2 (ENSMICG00000003345)	PTF1A (ENSMICG00000047889)	ENSMICG00000032921	ENSMICG00000001368	ENSMICG00000045500	KIAA1217 (ENSMICG00000002108)	ARHGAP21 (ENSMICG00000002125)	PRTFDC1 (ENSMICG00000011262)	ENKUR (ENSMICG00000011269)	GPR158 (ENSMICG00000014123)	MYO3A (ENSMICG00000006193)	GAD2 (ENSMICG00000006215)	APBB1IP (ENSMICG00000007226)	ENSMICG00000045846	PDSS1 (ENSMICG00000007027) ##22	ABI1 (ENSMICG00000033105)	ACBD5 (ENSMICG00000038152)	MASTL (ENSMICG00000009327)	ENSMICG00000027309	ENSMICG00000037016	ENSMICG00000028310	RAB18 (ENSMICG00000017280)	MKX (ENSMICG00000028783)	ODAD2 (ENSMICG00000002962)	MPP7 (ENSMICG00000000927)	WAC (ENSMICG00000001997)	ENSMICG00000034517	ENSMICG00000028291	BAMBI (ENSMICG00000031795)
Lemuriformes_a	ANCESTRAL SPECIES	163													ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.b	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Greater bamboo lemur	MODERN SPECIES	895																PDSS1 (ENSPSMG00000011345) ##22	ABI1 (ENSPSMG00000011444)
Coquerels sifaka	MODERN SPECIES	602													MYO3A (ENSPCOG00000021892)	GAD2 (ENSPCOG00000019975)	APBB1IP (ENSPCOG00000023997)	PDSS1 (ENSPCOG00000024776) ##22	ABI1 (ENSPCOG00000015268)	ENSPCOG00000008702	MASTL (ENSPCOG00000021477)	YME1L1 (ENSPCOG00000009159)	ENSPCOG00000004226	ENSPCOG00000013574	RAB18 (ENSPCOG00000018906)	MKX (ENSPCOG00000019199)	ODAD2 (ENSPCOG00000025424)	MPP7 (ENSPCOG00000009359)	WAC (ENSPCOG00000013769)	BAMBI (ENSPCOG00000028434)	ENSPCOG00000000742	ENSPCOG00000020378	ENSPCOG00000028503
Bushbaby	MODERN SPECIES	134	PTF1A (ENSOGAG00000024685)	ENSOGAG00000009210	ENSOGAG00000009212	OTUD1 (ENSOGAG00000010132)	ENSOGAG00000032657	ENSOGAG00000025028	KIAA1217 (ENSOGAG00000002217)	ARHGAP21 (ENSOGAG00000007167)	PRTFDC1 (ENSOGAG00000003466)	ENKUR (ENSOGAG00000005376)	THNSL1 (ENSOGAG00000005379)	GPR158 (ENSOGAG00000004723)	MYO3A (ENSOGAG00000011118)	GAD2 (ENSOGAG00000011131)	APBB1IP (ENSOGAG00000012412)	PDSS1 (ENSOGAG00000013945) ##22	ABI1 (ENSOGAG00000013949)	ACBD5 (ENSOGAG00000015873)	MASTL (ENSOGAG00000015870)	ENSOGAG00000015860	ENSOGAG00000008321	PTCHD3 (ENSOGAG00000012729)	RAB18 (ENSOGAG00000028015)	MKX (ENSOGAG00000026996)	ODAD2 (ENSOGAG00000012743)	MPP7 (ENSOGAG00000012749)	ENSOGAG00000026788	WAC (ENSOGAG00000030010)	BAMBI (ENSOGAG00000002860)	ENSOGAG00000030774	MAP3K8 (ENSOGAG00000005419)
Haplorrhini	ANCESTRAL SPECIES	32	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.a	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000015348	ENSGT00940000158582	ENSGT00940000158806
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000153498.B.a.a ##22
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.f	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Hominoidea	ANCESTRAL SPECIES	23	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.f	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.f	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.f	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Homo/Pan group	ANCESTRAL SPECIES	27	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.f	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Pan	ANCESTRAL SPECIES	26	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.f	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Bonobo	MODERN SPECIES	22	TPD52L3 (ENSPPAG00000032443)	IL33 (ENSPPAG00000029130)	ENSPPAG00000003096	ENSPPAG00000037216	KIAA2026 (ENSPPAG00000011370)	MLANA (ENSPPAG00000038099)	ERMP1 (ENSPPAG00000039739)	RIC1 (ENSPPAG00000039773)	PDCD1LG2 (ENSPPAG00000030710)	CD274 (ENSPPAG00000034663)	ENSPPAG00000031342	PLGRKT (ENSPPAG00000030588)	RLN1 (ENSPPAG00000029999)	RLN2 (ENSPPAG00000025312)	INSL6 (ENSPPAG00000002535)	ENSPPAG00000038776 ##22	JAK2 (ENSPPAG00000019000)	RCL1 (ENSPPAG00000037958)	AK3 (ENSPPAG00000033568)	CDC37L1 (ENSPPAG00000038614)	SPATA6L (ENSPPAG00000010175)	SLC1A1 (ENSPPAG00000027502)	GLIS3 (ENSPPAG00000043097)	ENSPPAG00000011368	RFX3 (ENSPPAG00000039978)	ENSPPAG00000029157	PUM3 (ENSPPAG00000041337)	KCNV2 (ENSPPAG00000040791)	VLDLR (ENSPPAG00000029389)	ENSPPAG00000042393	ENSPPAG00000042332
Chimpanzee	MODERN SPECIES	22	TPD52L3 (ENSPTRG00000046546)	IL33 (ENSPTRG00000020762)	RANBP6 (ENSPTRG00000048667)	KIAA2026 (ENSPTRG00000029350)	MLANA (ENSPTRG00000020761)	ERMP1 (ENSPTRG00000020760)	RIC1 (ENSPTRG00000020757)	PDCD1LG2 (ENSPTRG00000020756)	CD274 (ENSPTRG00000020755)	ENSPTRG00000046654	PLGRKT (ENSPTRG00000020753)	RLN1 (ENSPTRG00000050353)	RLN2 (ENSPTRG00000045482)	INSL4 (ENSPTRG00000020750)	INSL6 (ENSPTRG00000020748)	ENSPTRG00000052532 ##22	JAK2 (ENSPTRG00000020744)	RCL1 (ENSPTRG00000020743)	AK3 (ENSPTRG00000020742)	CDC37L1 (ENSPTRG00000020741)	PLPP6 (ENSPTRG00000044921)	SPATA6L (ENSPTRG00000020740)	SLC1A1 (ENSPTRG00000020739)	GLIS3 (ENSPTRG00000020738)	ENSPTRG00000050873	RFX3 (ENSPTRG00000048670)	ENSPTRG00000046907	PUM3 (ENSPTRG00000020735)	KCNV2 (ENSPTRG00000020734)	VLDLR (ENSPTRG00000020732)	ENSPTRG00000047815
Gorilla	MODERN SPECIES	22	ENSGGOG00000038683	IL33 (ENSGGOG00000001464)	ENSGGOG00000043437	KIAA2026 (ENSGGOG00000028212)	MLANA (ENSGGOG00000016251)	ERMP1 (ENSGGOG00000001865)	RIC1 (ENSGGOG00000004550)	PDCD1LG2 (ENSGGOG00000001681)	CD274 (ENSGGOG00000008540)	PLGRKT (ENSGGOG00000004113)	RLN1 (ENSGGOG00000005891)	RLN2 (ENSGGOG00000026430)	INSL4 (ENSGGOG00000036799)	INSL6 (ENSGGOG00000008771)	JAK2 (ENSGGOG00000007243)	ENSGGOG00000022573 ##22	RCL1 (ENSGGOG00000015041)	AK3 (ENSGGOG00000028122)	CDC37L1 (ENSGGOG00000006889)	SPATA6L (ENSGGOG00000034964)	PLPP6 (ENSGGOG00000040149)	SLC1A1 (ENSGGOG00000000262)	GLIS3 (ENSGGOG00000038970)	RFX3 (ENSGGOG00000003805)	ENSGGOG00000022372	PUM3 (ENSGGOG00000006143)	KCNV2 (ENSGGOG00000000231)	VLDLR (ENSGGOG00000001362)	ENSGGOG00000038609	SMARCA2 (ENSGGOG00000000513)	ENSGGOG00000039224
Gibbon	MODERN SPECIES	10	UHRF2 (ENSNLEG00000009135)	IL33 (ENSNLEG00000009115)	ENSNLEG00000035508	KIAA2026 (ENSNLEG00000009104)	MLANA (ENSNLEG00000009096)	ERMP1 (ENSNLEG00000009085)	RIC1 (ENSNLEG00000009045)	PDCD1LG2 (ENSNLEG00000009028)	CD274 (ENSNLEG00000009009)	ENSNLEG00000028615	PLGRKT (ENSNLEG00000008991)	RLN1 (ENSNLEG00000008986)	RLN2 (ENSNLEG00000008980)	INSL4 (ENSNLEG00000008978)	INSL6 (ENSNLEG00000008974)	ENSNLEG00000027963 ##22	JAK2 (ENSNLEG00000008897)	RCL1 (ENSNLEG00000008891)	AK3 (ENSNLEG00000008885)	CDC37L1 (ENSNLEG00000008879)	ENSNLEG00000028049	SPATA6L (ENSNLEG00000008860)	SLC1A1 (ENSNLEG00000031411)	ENSNLEG00000035119	ENSNLEG00000034817	ENSNLEG00000028743	RFX3 (ENSNLEG00000008785)	ENSNLEG00000029981	PUM3 (ENSNLEG00000008712)	KCNV2 (ENSNLEG00000008701)	VLDLR (ENSNLEG00000008596)
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00530000063821.b.b	ENSGT00940000160907	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460	ENSGT00520000061590
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154937.s.b	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT00940000159989.h	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154937.s.b	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT00940000159989.h	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460
Cercopithecinae_d	ANCESTRAL SPECIES	34	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154937.s.b	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT00940000159989.h	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460
Drill	MODERN SPECIES	978			ENSMLEG00000041909	KIAA2026 (ENSMLEG00000031007)	MLANA (ENSMLEG00000029385)	ERMP1 (ENSMLEG00000033422)	RIC1 (ENSMLEG00000032920)	PDCD1LG2 (ENSMLEG00000021844)	CD274 (ENSMLEG00000031295)	ENSMLEG00000042007	PLGRKT (ENSMLEG00000042174)	ENSMLEG00000035630	RLN2 (ENSMLEG00000039515)	INSL4 (ENSMLEG00000034989)	INSL6 (ENSMLEG00000042955)	ENSMLEG00000029968 ##22	JAK2 (ENSMLEG00000030814)	RCL1 (ENSMLEG00000043088)	AK3 (ENSMLEG00000032869)	CDC37L1 (ENSMLEG00000014590)	PLPP6 (ENSMLEG00000009133)	SPATA6L (ENSMLEG00000034746)	SLC1A1 (ENSMLEG00000042172)	GLIS3 (ENSMLEG00000040353)	ENSMLEG00000000662	ENSMLEG00000038681	RFX3 (ENSMLEG00000033860)	ENSMLEG00000041919	PUM3 (ENSMLEG00000034820)	KCNV2 (ENSMLEG00000032357)	VLDLR (ENSMLEG00000032288)
Macaca	ANCESTRAL SPECIES	10	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00390000000375	ENSGT00940000154937.s.b	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640	ENSGT00530000063404.a	ENSGT00940000155120	ENSGT00390000013443.d	ENSGT00940000160907	ENSGT00530000063821.b.b	ENSGT00940000155397.b	ENSGT00940000156896	ENSGT00910000146957	ENSGT00940000159989.h	ENSGT01050000244879.a.a.b	ENSGT00390000004049.cb	ENSGT00390000015757	ENSGT00940000157438	ENSGT00940000155460
Pig-tailed macaque	MODERN SPECIES	182								PDCD1LG2 (ENSMNEG00000022031)	CD274 (ENSMNEG00000044065)	PLGRKT (ENSMNEG00000035542)	ENSMNEG00000006679	ENSMNEG00000039597	RLN2 (ENSMNEG00000045554)	INSL4 (ENSMNEG00000038309)	INSL6 (ENSMNEG00000011366)	ENSMNEG00000032986 ##22	JAK2 (ENSMNEG00000031180)	RCL1 (ENSMNEG00000012288)	AK3 (ENSMNEG00000041876)	CDC37L1 (ENSMNEG00000030663)	PLPP6 (ENSMNEG00000001828)	SPATA6L (ENSMNEG00000044422)	SLC1A1 (ENSMNEG00000029913)	GLIS3 (ENSMNEG00000032738)	ENSMNEG00000040313	ENSMNEG00000042708	RFX3 (ENSMNEG00000038188)	ENSMNEG00000032248	PUM3 (ENSMNEG00000035288)	KCNV2 (ENSMNEG00000012723)	VLDLR (ENSMNEG00000040863)
Rhinopithecus	ANCESTRAL SPECIES	149	ENSGT00390000008296.b.a.a.g	ENSGT00940000163110	ENSGT00390000005185	ENSGT00940000162767	ENSGT00390000011483	ENSGT00390000009531	ENSGT00530000063839	ENSGT00390000002955	ENSGT00940000161373	ENSGT00940000161430	ENSGT00730000111317.d	ENSGT00390000000375	ENSGT00940000154434.a.a.e	ENSGT00940000154434.a.b	ENSGT00940000154434.b	ENSGT00940000153498.B.a.a ##22	ENSGT00940000155640
Black snub-nosed monkey	MODERN SPECIES	2458															JAK2 (ENSRBIG00000044098)	ENSRBIG00000008967 ##22
Golden snub-nosed monkey	MODERN SPECIES	1334															INSL6 (ENSRROG00000000155)	ENSRROG00000040926 ##22	JAK2 (ENSRROG00000029878)
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000153062.B	ENSGT00940000159197	ENSGT00510000048847	ENSGT00670000099483	ENSGT01020000230389.a.a.a	ENSGT01030000234556.b.b.c	ENSGT01030000234556.b.a	ENSGT00440000034341	ENSGT01030000234556.a.a.b	ENSGT01030000234556.a.a.a	ENSGT00940000153312.B	ENSGT00940000153312.A.a.a	ENSGT00940000153312.A.a.b	ENSGT00390000009300.b	ENSGT00390000009724.l.s.b.b.a	ENSGT00940000153498.B.a.a ##22	ENSGT00900000143681.a	ENSGT00390000009724.l.s.b.b.b.a	ENSGT00940000160099	ENSGT00390000007968	ENSGT01080000257333.B	ENSGT00390000005544.a	ENSGT00390000017207	ENSGT00940000155231.b	ENSGT00390000006949	ENSGT00900000141067.g.b	ENSGT01050000244848.B.a.a	ENSGT00730000110915.a	ENSGT00390000006115	ENSGT00940000162579	ENSGT00390000007799
Mas night monkey	MODERN SPECIES	527	ENSANAG00000030698	FXYD6 (ENSANAG00000037013)	TMPRSS13 (ENSANAG00000021105)	IL10RA (ENSANAG00000035211)	SMIM35 (ENSANAG00000022850)	TMPRSS4 (ENSANAG00000023662)	SCN4B (ENSANAG00000035259)	SCN2B (ENSANAG00000028770)	ENSANAG00000035212	MPZL3 (ENSANAG00000023677)	MPZL2 (ENSANAG00000020078)	CD3E (ENSANAG00000026744)	CD3D (ENSANAG00000022603)	CD3G (ENSANAG00000001439)	UBE4A (ENSANAG00000032329)	ENSANAG00000038325 ##22	ENSANAG00000036911	ENSANAG00000037867	KMT2A (ENSANAG00000034052)	TTC36 (ENSANAG00000024585)	TMEM25 (ENSANAG00000034826)	ENSANAG00000020113	ENSANAG00000018389	ARCN1 (ENSANAG00000033088)	PHLDB1 (ENSANAG00000036562)	TREH (ENSANAG00000025078)	ENSANAG00000038280	ENSANAG00000030156	CXCR5 (ENSANAG00000037713)	BCL9L (ENSANAG00000037394)	UPK2 (ENSANAG00000023625)
Cebidae	ANCESTRAL SPECIES		ENSGT00940000153062.B	ENSGT00940000159197	ENSGT00510000048847	ENSGT00670000099483	ENSGT01020000230389.a.a.a	ENSGT01030000234556.b.b.c	ENSGT01030000234556.b.a	ENSGT00440000034341	ENSGT01030000234556.a.a.b	ENSGT01030000234556.a.a.a	ENSGT00940000153312.B	ENSGT00940000153312.A.a.a	ENSGT00940000153312.A.a.b	ENSGT00390000009300.b	ENSGT00390000009724.l.s.b.b.a	ENSGT00940000153498.B.a.a ##22	ENSGT00900000143681.a	ENSGT00390000009724.l.s.b.b.b.a	ENSGT00940000160099	ENSGT00390000007968	ENSGT01080000257333.B	ENSGT00390000005544.a	ENSGT00390000017207	ENSGT00940000155231.b	ENSGT00390000006949	ENSGT00900000141067.h	ENSGT01050000244848.B.a.a	ENSGT00730000110915.a	ENSGT00390000006115	ENSGT00940000162579	ENSGT00390000007799
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00940000153062.A.b.b	ENSGT00940000153062.B	ENSGT00940000159197	ENSGT00510000048847	ENSGT00670000099483	ENSGT01020000230389.a.a.a	ENSGT01030000234556.b.b.c	ENSGT01030000234556.b.a	ENSGT00440000034341	ENSGT01030000234556.a.a.b	ENSGT01030000234556.a.a.a	ENSGT00940000153312.B	ENSGT00940000153312.A.a.a	ENSGT00940000153312.A.a.b	ENSGT00390000009300.b	ENSGT00940000153498.B.a.a ##22	ENSGT00900000143681.a	ENSGT00390000009724.l.s.b.b.b.a	ENSGT00940000160099	ENSGT00390000007968	ENSGT01080000257333.B	ENSGT00390000005544.a	ENSGT00390000017207	ENSGT00940000155231.b	ENSGT00390000006949	ENSGT00900000141067.h	ENSGT01050000244848.B.a.a	ENSGT00730000110915.a	ENSGT00390000006115	ENSGT00940000162579	ENSGT00390000007799
Capuchin	MODERN SPECIES	28	TMPRSS13 (ENSCCAG00000020234)	IL10RA (ENSCCAG00000028571)	SMIM35 (ENSCCAG00000028208)	TMPRSS4 (ENSCCAG00000034413)	SCN4B (ENSCCAG00000005224)	SCN2B (ENSCCAG00000024727)	ENSCCAG00000036942	MPZL3 (ENSCCAG00000025387)	MPZL2 (ENSCCAG00000032944)	ENSCCAG00000034595	ENSCCAG00000038075	CD3E (ENSCCAG00000035218)	CD3D (ENSCCAG00000015338)	CD3G (ENSCCAG00000030734)	UBE4A (ENSCCAG00000035381)	ENSCCAG00000022046 ##22	ENSCCAG00000020562	ENSCCAG00000018628	KMT2A (ENSCCAG00000036727)	TTC36 (ENSCCAG00000030947)	TMEM25 (ENSCCAG00000022338)	ENSCCAG00000033035	ARCN1 (ENSCCAG00000010404)	PHLDB1 (ENSCCAG00000034589)	TREH (ENSCCAG00000029342)	DDX6 (ENSCCAG00000021636)	ENSCCAG00000027466	CXCR5 (ENSCCAG00000029446)	BCL9L (ENSCCAG00000036200)	UPK2 (ENSCCAG00000025890)	FOXR1 (ENSCCAG00000035010)
Simiiformes	ANCESTRAL SPECIES	29	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.a	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00550000074817.e.a.b	ENSGT00390000015348	ENSGT00940000158582
Catarrhini	ANCESTRAL SPECIES	26	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00910000147571	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00910000147571	ENSGT00940000162459.c.a	ENSGT00550000074836.i	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00910000147571	ENSGT00940000162459.c.a	ENSGT00550000074836.i	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227.o
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	28	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406.e	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00910000147571	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836.i	ENSGT00940000157002	ENSGT00940000156350	ENSGT00530000063282.t.h.b	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227.o
Gorilla	MODERN SPECIES	1	ARMC3 (ENSGGOG00000015798)	ENSGGOG00000010570	PTF1A (ENSGGOG00000015210)	C10orf67 (ENSGGOG00000000660)	OTUD1 (ENSGGOG00000000739)	KIAA1217 (ENSGGOG00000014822)	ENSGGOG00000027508	ARHGAP21 (ENSGGOG00000006767)	PRTFDC1 (ENSGGOG00000014731)	ENKUR (ENSGGOG00000003223)	THNSL1 (ENSGGOG00000025269)	GPR158 (ENSGGOG00000015920)	MYO3A (ENSGGOG00000006760)	GAD2 (ENSGGOG00000006775)	APBB1IP (ENSGGOG00000010446)	PDSS1 (ENSGGOG00000011654) ##22	ABI1 (ENSGGOG00000011664)	ENSGGOG00000040000	YME1L1 (ENSGGOG00000016750)	MASTL (ENSGGOG00000016767)	ACBD5 (ENSGGOG00000025154)	ENSGGOG00000012882	ZCCHC24 (ENSGGOG00000040340)	ENSGGOG00000042084	PPIF (ENSGGOG00000037486)	ENSGGOG00000043751	ZMIZ1 (ENSGGOG00000005242)	ENSGGOG00000022357	POLR3A (ENSGGOG00000027729)	DLG5 (ENSGGOG00000008140)	ENSGGOG00000025920
Homo/Pan group	ANCESTRAL SPECIES	28	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406.e	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00910000147571	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836.i	ENSGT00940000157002	ENSGT00940000156350	ENSGT00530000063282.t.h.b	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031
Pan	ANCESTRAL SPECIES	11	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406.e	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00910000147571	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836.i	ENSGT00940000157002	ENSGT00940000156350	ENSGT00530000063282.t.h.b	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031
Bonobo	MODERN SPECIES	1	ENSPPAG00000044064	ARMC3 (ENSPPAG00000033845)	ENSPPAG00000027784	C10orf67 (ENSPPAG00000028736)	KIAA1217 (ENSPPAG00000031597)	ENSPPAG00000012197	ARHGAP21 (ENSPPAG00000033905)	PRTFDC1 (ENSPPAG00000036273)	ENKUR (ENSPPAG00000036319)	THNSL1 (ENSPPAG00000002058)	GPR158 (ENSPPAG00000030587)	ENSPPAG00000017692	MYO3A (ENSPPAG00000041293)	GAD2 (ENSPPAG00000033893)	APBB1IP (ENSPPAG00000039998)	PDSS1 (ENSPPAG00000023441) ##22	ABI1 (ENSPPAG00000038643)	ANKRD26 (ENSPPAG00000042479)	YME1L1 (ENSPPAG00000039964)	MASTL (ENSPPAG00000039332)	ACBD5 (ENSPPAG00000036984)	ENSPPAG00000028031	ENSPPAG00000042510	ENSPPAG00000042209	RAB18 (ENSPPAG00000041625)	ENSPPAG00000006842	MKX (ENSPPAG00000041924)	ODAD2 (ENSPPAG00000017967)	MPP7 (ENSPPAG00000032595)	WAC (ENSPPAG00000040064)	BAMBI (ENSPPAG00000004681)
Chimpanzee	MODERN SPECIES	1	C10H10orf67 (ENSPTRG00000002360)	OTUD1 (ENSPTRG00000049721)	KIAA1217 (ENSPTRG00000002362)	ENSPTRG00000043362	ENSPTRG00000043370	ARHGAP21 (ENSPTRG00000002365)	PRTFDC1 (ENSPTRG00000002366)	ENKUR (ENSPTRG00000002367)	THNSL1 (ENSPTRG00000002368)	GPR158 (ENSPTRG00000002369)	ENSPTRG00000052744	MYO3A (ENSPTRG00000002371)	GAD2 (ENSPTRG00000002372)	APBB1IP (ENSPTRG00000002373)	ENSPTRG00000049037	PDSS1 (ENSPTRG00000002374) ##22	ABI1 (ENSPTRG00000024219)	ANKRD26 (ENSPTRG00000002376)	YME1L1 (ENSPTRG00000002378)	MASTL (ENSPTRG00000002379)	ACBD5 (ENSPTRG00000002380)	ENSPTRG00000041217	ENSPTRG00000050986	PTCHD3 (ENSPTRG00000002383)	RAB18 (ENSPTRG00000002384)	ENSPTRG00000040120	MKX (ENSPTRG00000002385)	ODAD2 (ENSPTRG00000002386)	MPP7 (ENSPTRG00000002387)	WAC (ENSPTRG00000002388)	BAMBI (ENSPTRG00000002389)
Human	MODERN SPECIES	1	PIP4K2A (ENSG00000150867)	ARMC3 (ENSG00000165309)	MSRB2 (ENSG00000148450)	PTF1A (ENSG00000168267)	C10orf67 (ENSG00000179133)	OTUD1 (ENSG00000165312)	KIAA1217 (ENSG00000120549)	ARHGAP21 (ENSG00000107863)	PRTFDC1 (ENSG00000099256)	ENKUR (ENSG00000151023)	THNSL1 (ENSG00000185875)	GPR158 (ENSG00000151025)	MYO3A (ENSG00000095777)	GAD2 (ENSG00000136750)	APBB1IP (ENSG00000077420)	PDSS1 (ENSG00000148459) ##22	ABI1 (ENSG00000136754)	ANKRD26 (ENSG00000107890)	YME1L1 (ENSG00000136758)	MASTL (ENSG00000120539)	ACBD5 (ENSG00000107897)	PTCHD3 (ENSG00000182077)	RAB18 (ENSG00000099246)	MKX (ENSG00000150051)	ODAD2 (ENSG00000169126)	MPP7 (ENSG00000150054)	WAC (ENSG00000095787)	BAMBI (ENSG00000095739)	LYZL1 (ENSG00000120563)	SVIL (ENSG00000197321)	JCAD (ENSG00000165757)
Orangutan	MODERN SPECIES	1	ENSPPYG00000002149	PTF1A (ENSPPYG00000032925)	C10orf67 (ENSPPYG00000002152)	OTUD1 (ENSPPYG00000033282)	KIAA1217 (ENSPPYG00000002154)	ENSPPYG00000002155	ARHGAP21 (ENSPPYG00000002156)	PRTFDC1 (ENSPPYG00000002157)	ENKUR (ENSPPYG00000002813)	THNSL1 (ENSPPYG00000002816)	GPR158 (ENSPPYG00000002158)	MYO3A (ENSPPYG00000002159)	GAD2 (ENSPPYG00000002160)	APBB1IP (ENSPPYG00000002161)	ENSPPYG00000032448	PDSS1 (ENSPPYG00000002163) ##22	ABI1 (ENSPPYG00000002164)	ENSPPYG00000031016	ANKRD26 (ENSPPYG00000002165)	YME1L1 (ENSPPYG00000002166)	MASTL (ENSPPYG00000002168)	ACBD5 (ENSPPYG00000002169)	ENSPPYG00000039136	ENSPPYG00000002171	RAB18 (ENSPPYG00000002172)	MKX (ENSPPYG00000002173)	ODAD2 (ENSPPYG00000002174)	MPP7 (ENSPPYG00000002175)	WAC (ENSPPYG00000002177)	BAMBI (ENSPPYG00000002178)	ENSPPYG00000002180
Gibbon	MODERN SPECIES	8	CASP6 (ENSNLEG00000016591)	ENSNLEG00000030235	MCUB (ENSNLEG00000016592)	SEC24B (ENSNLEG00000016603)	ENSNLEG00000032374	ENSNLEG00000034088	KIAA1217 (ENSNLEG00000016638)	ARHGAP21 (ENSNLEG00000016714)	PRTFDC1 (ENSNLEG00000016746)	THNSL1 (ENSNLEG00000016757)	ENKUR (ENSNLEG00000016751)	GPR158 (ENSNLEG00000016759)	MYO3A (ENSNLEG00000016768)	GAD2 (ENSNLEG00000016794)	APBB1IP (ENSNLEG00000016823)	PDSS1 (ENSNLEG00000016836) ##22	ABI1 (ENSNLEG00000033926)	ANKRD26 (ENSNLEG00000016879)	YME1L1 (ENSNLEG00000016905)	MASTL (ENSNLEG00000016931)	ACBD5 (ENSNLEG00000028983)	ENSNLEG00000029670	ENSNLEG00000016963	RAB18 (ENSNLEG00000016970)	MKX (ENSNLEG00000016980)	ODAD2 (ENSNLEG00000016984)	MPP7 (ENSNLEG00000017002)	WAC (ENSNLEG00000017014)	BAMBI (ENSNLEG00000017028)	ENSNLEG00000031639	ENSNLEG00000017070
Cercopithecidae	ANCESTRAL SPECIES	29	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00390000001795	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00910000147571	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00550000074807.d	ENSGT00940000163080	ENSGT00390000012569.a.fb.b.b.b.b	ENSGT00940000156232.b	ENSGT00440000037780.a
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000161673	ENSGT00900000143156.a.c	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00910000147571	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031
Vervet Monkey	MODERN SPECIES	28	ARMC3 (ENSCSAG00000012440)	MSRB2 (ENSCSAG00000012427)	PTF1A (ENSCSAG00000012422)	ENSCSAG00000012415	ENSCSAG00000012408	OTUD1 (ENSCSAG00000019058)	KIAA1217 (ENSCSAG00000012397)	ARHGAP21 (ENSCSAG00000012325)	PRTFDC1 (ENSCSAG00000012165)	ENKUR (ENSCSAG00000012159)	THNSL1 (ENSCSAG00000019059)	GPR158 (ENSCSAG00000012152)	ENSCSAG00000012143	GAD2 (ENSCSAG00000012130)	APBB1IP (ENSCSAG00000012106)	PDSS1 (ENSCSAG00000012067) ##22	ABI1 (ENSCSAG00000011992)	ANKRD26 (ENSCSAG00000011974)	YME1L1 (ENSCSAG00000011924)	MASTL (ENSCSAG00000011793)	ACBD5 (ENSCSAG00000011784)	ENSCSAG00000011771	PTCHD3 (ENSCSAG00000011759)	RAB18 (ENSCSAG00000011749)	MKX (ENSCSAG00000011743)	ODAD2 (ENSCSAG00000011739)	MPP7 (ENSCSAG00000011728)	ENSCSAG00000019060	WAC (ENSCSAG00000011716)	BAMBI (ENSCSAG00000011702)	ENSCSAG00000011695
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000161673	ENSGT00900000143156.a.c	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00910000147571	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000001376.bb.b.a.b	ENSGT00440000037780.a	ENSGT00940000154101.b
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00390000001795	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00910000147571	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000001376.bb.b.b	ENSGT00440000037780.a	ENSGT00940000154101.b
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000161000	ENSGT00390000003836	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.b.b.b.a	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT01100000263508.B.a.b.b.d	ENSGT00940000156105	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.b.b	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000001376.bb.b.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000153314.a.b.a.k
Rhesus	MODERN SPECIES	19	OTUD1 (ENSMMUG00000009247)	ENSMMUG00000056090	KIAA1217 (ENSMMUG00000008376)	ARHGAP21 (ENSMMUG00000016123)	ENSMMUG00000051979	PRTFDC1 (ENSMMUG00000018728)	ENKUR (ENSMMUG00000050879)	THNSL1 (ENSMMUG00000022383)	GPR158 (ENSMMUG00000002930)	ENSMMUG00000051679	MYO3A (ENSMMUG00000012229)	GAD2 (ENSMMUG00000012233)	ENSMMUG00000063976	APBB1IP (ENSMMUG00000022948)	ENSMMUG00000050233	PDSS1 (ENSMMUG00000005076) ##22	ABI1 (ENSMMUG00000005078)	ANKRD26 (ENSMMUG00000016403)	YME1L1 (ENSMMUG00000016406)	MASTL (ENSMMUG00000016407)	ACBD5 (ENSMMUG00000016410)	PTCHD3 (ENSMMUG00000020657)	RAB18 (ENSMMUG00000046971)	MKX (ENSMMUG00000020660)	ODAD2 (ENSMMUG00000020661)	MPP7 (ENSMMUG00000020663)	ENSMMUG00000040316	WAC (ENSMMUG00000008268)	ENSMMUG00000058434	BAMBI (ENSMMUG00000058108)	ENSMMUG00000059681
Crab-eating macaque	MODERN SPECIES	19	C10orf67 (ENSMFAG00000033328)	ENSMFAG00000052134	KIAA1217 (ENSMFAG00000030609)	ENSMFAG00000062407	ARHGAP21 (ENSMFAG00000041144)	PRTFDC1 (ENSMFAG00000039843)	ENKUR (ENSMFAG00000003027)	THNSL1 (ENSMFAG00000064275)	GPR158 (ENSMFAG00000042015)	MYO3A (ENSMFAG00000040667)	GAD2 (ENSMFAG00000042664)	ENSMFAG00000062571	APBB1IP (ENSMFAG00000044592)	ENSMFAG00000056088	ENSMFAG00000050349	PDSS1 (ENSMFAG00000042603) ##22	ABI1 (ENSMFAG00000031700)	ANKRD26 (ENSMFAG00000033906)	YME1L1 (ENSMFAG00000041596)	MASTL (ENSMFAG00000031733)	ACBD5 (ENSMFAG00000042324)	ENSMFAG00000056802	PTCHD3 (ENSMFAG00000035376)	RAB18 (ENSMFAG00000006430)	MKX (ENSMFAG00000048058)	ODAD2 (ENSMFAG00000038877)	MPP7 (ENSMFAG00000044798)	ENSMFAG00000007430	ENSMFAG00000056748	WAC (ENSMFAG00000001983)	BAMBI (ENSMFAG00000037543)
Pig-tailed macaque	MODERN SPECIES	562	ENSMNEG00000045503	PTF1A (ENSMNEG00000029460)	C10orf67 (ENSMNEG00000039209)	OTUD1 (ENSMNEG00000000824)	ENSMNEG00000010094	ENSMNEG00000030987	KIAA1217 (ENSMNEG00000029004)	ARHGAP21 (ENSMNEG00000041587)	PRTFDC1 (ENSMNEG00000005139)	ENKUR (ENSMNEG00000029587)	THNSL1 (ENSMNEG00000000675)	GPR158 (ENSMNEG00000036391)	MYO3A (ENSMNEG00000031491)	GAD2 (ENSMNEG00000036631)	APBB1IP (ENSMNEG00000029456)	PDSS1 (ENSMNEG00000035571) ##22	ABI1 (ENSMNEG00000042282)	ENSMNEG00000043430	ANKRD26 (ENSMNEG00000034377)	YME1L1 (ENSMNEG00000039187)	MASTL (ENSMNEG00000029011)	ACBD5 (ENSMNEG00000035816)	ENSMNEG00000039132	PTCHD3 (ENSMNEG00000015528)	RAB18 (ENSMNEG00000038180)	MKX (ENSMNEG00000039776)	ODAD2 (ENSMNEG00000022625)	ENSMNEG00000029878	MPP7 (ENSMNEG00000042436)	ENSMNEG00000029850	WAC (ENSMNEG00000032060)
Cercopithecinae_b	ANCESTRAL SPECIES	41	ENSGT00900000143156.a.c	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00910000147571	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325
Olive baboon	MODERN SPECIES	2	ENSPANG00000047416	C10orf67 (ENSPANG00000023091)	OTUD1 (ENSPANG00000039792)	KIAA1217 (ENSPANG00000023082)	ARHGAP21 (ENSPANG00000023086)	ENSPANG00000047226	PRTFDC1 (ENSPANG00000023089)	ENSPANG00000039942	THNSL1 (ENSPANG00000018626)	ENKUR (ENSPANG00000023081)	MYO3A (ENSPANG00000023026)	GAD2 (ENSPANG00000023028)	ENSPANG00000042563	APBB1IP (ENSPANG00000023032)	ENSPANG00000050752	PDSS1 (ENSPANG00000023036) ##22	ABI1 (ENSPANG00000023038)	ANKRD26 (ENSPANG00000023022)	YME1L1 (ENSPANG00000023000)	MASTL (ENSPANG00000023001)	ACBD5 (ENSPANG00000023002)	RAB18 (ENSPANG00000023005)	ENSPANG00000047067	PTCHD3 (ENSPANG00000030115)	MKX (ENSPANG00000022998)	ODAD2 (ENSPANG00000022989)	MPP7 (ENSPANG00000022992)	ENSPANG00000048963	ENSPANG00000050280	ENSPANG00000017854	ENSPANG00000041254
Cercopithecinae_d	ANCESTRAL SPECIES	86	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00950000183210.d.a.c.b.b.b.d	ENSGT00390000001795	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000156134.f	ENSGT00940000158727	ENSGT00940000157325
Sooty mangabey	MODERN SPECIES	625	ENSCATG00000029358	PTF1A (ENSCATG00000041385)	C10orf67 (ENSCATG00000040730)	OTUD1 (ENSCATG00000020303)	ENSCATG00000033411	ENSCATG00000001282	KIAA1217 (ENSCATG00000017140)	ARHGAP21 (ENSCATG00000037108)	PRTFDC1 (ENSCATG00000006747)	THNSL1 (ENSCATG00000015727)	ENKUR (ENSCATG00000037199)	GPR158 (ENSCATG00000031425)	MYO3A (ENSCATG00000021307)	GAD2 (ENSCATG00000043640)	APBB1IP (ENSCATG00000041001)	PDSS1 (ENSCATG00000037833) ##22	ABI1 (ENSCATG00000044966)	ANKRD26 (ENSCATG00000036433)	YME1L1 (ENSCATG00000041095)	MASTL (ENSCATG00000040493)	ACBD5 (ENSCATG00000037669)	ENSCATG00000039692
Drill	MODERN SPECIES	1609															APBB1IP (ENSMLEG00000024572)	PDSS1 (ENSMLEG00000033037) ##22	ABI1 (ENSMLEG00000036086)	ANKRD26 (ENSMLEG00000037255)	ENSMLEG00000040197	YME1L1 (ENSMLEG00000036544)
Rhinopithecus	ANCESTRAL SPECIES	219					ENSGT00940000156098	ENSGT00390000001795	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000162459.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000001376.ab.b.a.a.a.a.a	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031
Golden snub-nosed monkey	MODERN SPECIES	2276																PDSS1 (ENSRROG00000032574) ##22	ABI1 (ENSRROG00000029150)	ANKRD26 (ENSRROG00000030573)	YME1L1 (ENSRROG00000044344)	MASTL (ENSRROG00000029275)	ACBD5 (ENSRROG00000042474)	PTCHD3 (ENSRROG00000045695)	RAB18 (ENSRROG00000040563)	MKX (ENSRROG00000030420)	ODAD2 (ENSRROG00000034521)	ENSRROG00000006389	MPP7 (ENSRROG00000031444)	ENSRROG00000023015	WAC (ENSRROG00000026667)	ENSRROG00000026253	BAMBI (ENSRROG00000045522)
Black snub-nosed monkey	MODERN SPECIES	1603															APBB1IP (ENSRBIG00000043706)	PDSS1 (ENSRBIG00000037709) ##22	ABI1 (ENSRBIG00000021242)
Platyrrhini	ANCESTRAL SPECIES	39	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00390000005923	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.a	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00550000074817.e.a.b.a	ENSGT00390000003031	ENSGT00910000147147
Cebidae	ANCESTRAL SPECIES	37	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00890000139472.a.b	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.a	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00550000074817.e.a.b.a	ENSGT00390000003031	ENSGT00910000147147
Marmoset	MODERN SPECIES	19	ENSCJAG00000082593	ENSCJAG00000074284	ENSCJAG00000057423	KIAA1217 (ENSCJAG00000007722)	ARHGAP21 (ENSCJAG00000007642)	PRTFDC1 (ENSCJAG00000007610)	ENKUR (ENSCJAG00000043497)	THNSL1 (ENSCJAG00000066861)	GPR158 (ENSCJAG00000007574)	ENSCJAG00000054842	MYO3A (ENSCJAG00000007540)	GAD2 (ENSCJAG00000007478)	ENSCJAG00000007458	ENSCJAG00000071636	ENSCJAG00000085514	PDSS1 (ENSCJAG00000004695) ##22	ENSCJAG00000075006	ABI1 (ENSCJAG00000004711)	ACBD5 (ENSCJAG00000004775)	MASTL (ENSCJAG00000004808)	ENSCJAG00000073040	YME1L1 (ENSCJAG00000004830)	ENSCJAG00000086317	ENSCJAG00000075915	ENSCJAG00000084177	ENSCJAG00000073432	ENSCJAG00000079345	PTCHD3 (ENSCJAG00000013002)	RAB18 (ENSCJAG00000045749)	MKX (ENSCJAG00000013033)	ODAD2 (ENSCJAG00000013045)
Cebidae_a	ANCESTRAL SPECIES	45	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00890000139472.a.b	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a.b ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459.c.a	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00550000074817.e.a.b.a	ENSGT00390000003031	ENSGT00910000147147
Bolivian squirrel monkey	MODERN SPECIES	81	SPAG6 (ENSSBOG00000033856)	PIP4K2A (ENSSBOG00000032835)	ARMC3 (ENSSBOG00000025211)	MSRB2 (ENSSBOG00000025907)	PTF1A (ENSSBOG00000025704)	C10orf67 (ENSSBOG00000022972)	ENSSBOG00000018568	KIAA1217 (ENSSBOG00000028147)	ARHGAP21 (ENSSBOG00000029568)	PRTFDC1 (ENSSBOG00000028411)	ENKUR (ENSSBOG00000019774)	GPR158 (ENSSBOG00000029162)	MYO3A (ENSSBOG00000036221)	GAD2 (ENSSBOG00000034657)	APBB1IP (ENSSBOG00000022628)	PDSS1 (ENSSBOG00000025358) ##22	ABI1 (ENSSBOG00000030426)	ACBD5 (ENSSBOG00000025790)	MASTL (ENSSBOG00000032267)	YME1L1 (ENSSBOG00000032541)	ENSSBOG00000028595	ANKRD26 (ENSSBOG00000023704)
Capuchin	MODERN SPECIES	92	MSRB2 (ENSCCAG00000036660)	PTF1A (ENSCCAG00000021008)	C10orf67 (ENSCCAG00000032524)	ENSCCAG00000033009	ENSCCAG00000019987	KIAA1217 (ENSCCAG00000001055)	ARHGAP21 (ENSCCAG00000021990)	PRTFDC1 (ENSCCAG00000033334)	THNSL1 (ENSCCAG00000018055)	ENKUR (ENSCCAG00000008934)	GPR158 (ENSCCAG00000029191)	MYO3A (ENSCCAG00000034884)	GAD2 (ENSCCAG00000022677)	APBB1IP (ENSCCAG00000030570)	ENSCCAG00000021249	PDSS1 (ENSCCAG00000036914) ##22	ENSCCAG00000025972	ABI1 (ENSCCAG00000027307)	ACBD5 (ENSCCAG00000033824)	MASTL (ENSCCAG00000022923)	YME1L1 (ENSCCAG00000024436)	ANKRD26 (ENSCCAG00000025255)	PTCHD3 (ENSCCAG00000027736)	RAB18 (ENSCCAG00000006762)	MKX (ENSCCAG00000019211)	ODAD2 (ENSCCAG00000030918)	MPP7 (ENSCCAG00000029066)	WAC (ENSCCAG00000032507)	BAMBI (ENSCCAG00000029330)	ENSCCAG00000022232	ENSCCAG00000021375
Mas night monkey	MODERN SPECIES	488																PDSS1 (ENSANAG00000026290) ##22	ABI1 (ENSANAG00000036582)	ACBD5 (ENSANAG00000024713)	MASTL (ENSANAG00000021810)	YME1L1 (ENSANAG00000030831)	ANKRD26 (ENSANAG00000019949)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	4210													ENSTSYG00000000879	GAD2 (ENSTSYG00000004676)	APBB1IP (ENSTSYG00000004802)	PDSS1 (ENSTSYG00000006574) ##22
Tarsier	MODERN SPECIES	6647																ENSTSYG00000036526 ##22	ABI1 (ENSTSYG00000006639)
Euarchontoglires_A	ANCESTRAL SPECIES	27	ENSGT00940000161673	ENSGT00940000161000	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Tree shrew	MODERN SPECIES	2403																ENSTBEG00000011625 ##22	ABI1 (ENSTBEG00000011815)
Glires	ANCESTRAL SPECIES	28	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Lagomorpha	ANCESTRAL SPECIES	131						ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000155003.e.a	ENSGT00940000154801	ENSGT00950000182860.a.a.b	ENSGT00950000183208.B	ENSGT00940000154653	ENSGT00390000015348	ENSGT00940000158582	ENSGT00940000158806	ENSGT00940000159227	ENSGT00940000157325	ENSGT00940000156227.f
Rabbit	MODERN SPECIES	7					KIAA1217 (ENSOCUG00000016518)	ARHGAP21 (ENSOCUG00000002720)	PRTFDC1 (ENSOCUG00000013452)	ENKUR (ENSOCUG00000011392)	THNSL1 (ENSOCUG00000012792)	GPR158 (ENSOCUG00000005356)	MYO3A (ENSOCUG00000017461)	GAD2 (ENSOCUG00000017480)	ENSOCUG00000005845	ENSOCUG00000037897	ENSOCUG00000034373	PDSS1 (ENSOCUG00000010068) ##22	ABI1 (ENSOCUG00000010076)	ACBD5 (ENSOCUG00000016879)	MASTL (ENSOCUG00000011308)	YME1L1 (ENSOCUG00000011293)	ANKRD26 (ENSOCUG00000008269)	ENSOCUG00000022239	ENSOCUG00000036333	EPC1 (ENSOCUG00000000789)	KIF5B (ENSOCUG00000017493)	ARHGAP12 (ENSOCUG00000015950)	ZEB1 (ENSOCUG00000006516)	SVIL (ENSOCUG00000010895)	JCAD (ENSOCUG00000014102)	MTPAP (ENSOCUG00000007276)	MAP3K8 (ENSOCUG00000006056)
Pika	MODERN SPECIES	2086																PDSS1 (ENSOPRG00000006308) ##22	ABI1 (ENSOPRG00000006319)	ENSOPRG00000006342	ENSOPRG00000006359
Rodentia	ANCESTRAL SPECIES	24	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Rodentia_B	ANCESTRAL SPECIES	32	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000155003.e.a	ENSGT00940000154801	ENSGT00950000182860.a.a.b	ENSGT00950000183208.B	ENSGT00390000014526	ENSGT00940000154653	ENSGT00390000015348	ENSGT00940000158582	ENSGT00940000158806	ENSGT00940000159227	ENSGT00940000154101.b
Kangaroo rat	MODERN SPECIES	343	Armc3 (ENSDORG00000000892)	Msrb2 (ENSDORG00000007658)	Ptf1a (ENSDORG00000026200)	Otud1 (ENSDORG00000025924)	Etl4 (ENSDORG00000011137)	Arhgap21 (ENSDORG00000006139)	ENSDORG00000000872	Enkur (ENSDORG00000015534)	Thnsl1 (ENSDORG00000028470)	ENSDORG00000024997	Gpr158 (ENSDORG00000000417)	ENSDORG00000028759	ENSDORG00000028584	Gad2 (ENSDORG00000004189)	Apbb1ip (ENSDORG00000009613)	Pdss1 (ENSDORG00000004641) ##22	Abi1 (ENSDORG00000004644)	Acbd5 (ENSDORG00000011034)	ENSDORG00000006106	Mastl (ENSDORG00000023472)	Yme1l1 (ENSDORG00000007653)	ENSDORG00000025588	ENSDORG00000030026	Kif5b (ENSDORG00000009869)	Arhgap12 (ENSDORG00000000084)	Zeb1 (ENSDORG00000007230)	Zfp438 (ENSDORG00000000914)	Svil (ENSDORG00000012493)	ENSDORG00000024825	Jcad (ENSDORG00000010476)	Mtpap (ENSDORG00000008425)
Myomorpha	ANCESTRAL SPECIES	34	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Muroidea	ANCESTRAL SPECIES	35	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b	ENSGT00940000156952	ENSGT00940000154926	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348	ENSGT00940000154653	ENSGT00390000014526	ENSGT00950000183208.B
Cricetinae	ANCESTRAL SPECIES	26	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b	ENSGT00940000156952	ENSGT00940000154926	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348	ENSGT00940000154653	ENSGT00390000014526	ENSGT00950000183208.B
Golden Hamster	MODERN SPECIES	751	Armc3 (ENSMAUG00000010005)	Msrb2 (ENSMAUG00000011556)	Ptf1a (ENSMAUG00000010725)	4921504E06Rik (ENSMAUG00000011632)	Otud1 (ENSMAUG00000009704)	ENSMAUG00000009350	ENSMAUG00000004145	Arhgap21 (ENSMAUG00000003592)	Enkur (ENSMAUG00000000129)	Thnsl1 (ENSMAUG00000018216)	Gpr158 (ENSMAUG00000018973)	ENSMAUG00000007073	ENSMAUG00000018624	Gad2 (ENSMAUG00000017847)	Apbb1ip (ENSMAUG00000014421)	Pdss1 (ENSMAUG00000000067) ##22	Abi1 (ENSMAUG00000018844)	Mastl (ENSMAUG00000013771)	Yme1l1 (ENSMAUG00000015039)
Chinese hamster chok1gshd	MODERN SPECIES	317	4921504E06Rik (ENSCGRG00001011440)	ENSCGRG00001010382	Otud1 (ENSCGRG00001005968)	Etl4 (ENSCGRG00001017877)	Arhgap21 (ENSCGRG00001016768)	ENSCGRG00001021203	Enkur (ENSCGRG00001019789)	Thnsl1 (ENSCGRG00001002158)	ENSCGRG00001000506	Gpr158 (ENSCGRG00001020901)	ENSCGRG00001008346	Myo3a (ENSCGRG00001010156)	Gad2 (ENSCGRG00001016806)	Apbb1ip (ENSCGRG00001024669)	ENSCGRG00001021110	Pdss1 (ENSCGRG00001001187) ##22	Abi1 (ENSCGRG00001015687)	Acbd5 (ENSCGRG00001015527)	Mastl (ENSCGRG00001012625)	Yme1l1 (ENSCGRG00001024397)	Potegl (ENSCGRG00001019810)	Crem (ENSCGRG00001013907)	Cul2 (ENSCGRG00001010730)	Bambi (ENSCGRG00001004379)	Lyzl1 (ENSCGRG00001024217)	Map3k8 (ENSCGRG00001019251)	ENSCGRG00001017262	Jcad (ENSCGRG00001007782)	ENSCGRG00001005314	Svil (ENSCGRG00001010819)	Zfp438 (ENSCGRG00001006731)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00900000141099.d	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000161777.a.a.a	ENSGT00940000156952	ENSGT00940000154926	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348	ENSGT00940000154653	ENSGT00390000014526	ENSGT00950000183208.B
Northern American deer mouse	MODERN SPECIES	18	Spag6 (ENSPEMG00000026080)	Pip4k2a (ENSPEMG00000011868)	Armc3 (ENSPEMG00000012860)	Msrb2 (ENSPEMG00000024021)	ENSPEMG00000025913	Ptf1a (ENSPEMG00000013454)	Etl4 (ENSPEMG00000016350)	Arhgap21 (ENSPEMG00000016926)	ENSPEMG00000008669	Enkur (ENSPEMG00000019522)	Thnsl1 (ENSPEMG00000019380)	Gpr158 (ENSPEMG00000020025)	Myo3a (ENSPEMG00000019498)	Gad2 (ENSPEMG00000019483)	Apbb1ip (ENSPEMG00000023687)	Pdss1 (ENSPEMG00000014017) ##22	Abi1 (ENSPEMG00000022633)	Acbd5 (ENSPEMG00000022231)	Mastl (ENSPEMG00000022732)	Yme1l1 (ENSPEMG00000022499)	ENSPEMG00000026720	Crem (ENSPEMG00000010762)	Cul2 (ENSPEMG00000019784)	Bambi (ENSPEMG00000031220)	Lyzl1 (ENSPEMG00000019546)	Map3k8 (ENSPEMG00000020056)	Mtpap (ENSPEMG00000019906)	Jcad (ENSPEMG00000019810)	Svil (ENSPEMG00000019892)	Zfp438 (ENSPEMG00000019458)	Zeb1 (ENSPEMG00000019404)
Prairie vole	MODERN SPECIES	3	ENSMOCG00000012986	ENSMOCG00000018863	ENSMOCG00000009508	ENSMOCG00000022264	Arhgap21 (ENSMOCG00000002205)	ENSMOCG00000002476	ENSMOCG00000017062	Enkur (ENSMOCG00000021111)	Thnsl1 (ENSMOCG00000008966)	Gpr158 (ENSMOCG00000014104)	ENSMOCG00000013399	ENSMOCG00000017133	ENSMOCG00000001785	Gad2 (ENSMOCG00000012215)	Apbb1ip (ENSMOCG00000012582)	Pdss1 (ENSMOCG00000020894) ##22	Abi1 (ENSMOCG00000020584)	Acbd5 (ENSMOCG00000017637)	Mastl (ENSMOCG00000008062)	Yme1l1 (ENSMOCG00000020958)	ENSMOCG00000013156	ENSMOCG00000018873	Crem (ENSMOCG00000002538)	Cul2 (ENSMOCG00000019052)	Bambi (ENSMOCG00000009000)	Lyzl1 (ENSMOCG00000000563)	ENSMOCG00000002897	Map3k8 (ENSMOCG00000000850)	Mtpap (ENSMOCG00000002437)	Jcad (ENSMOCG00000015379)	Svil (ENSMOCG00000012898)
Murinae	ANCESTRAL SPECIES	27	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b
Mus	ANCESTRAL SPECIES	1	ENSGT00950000183868	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862	ENSGT00940000159561	ENSGT00950000182943.kb.b.b.a.a.b	ENSGT00950000182943.kb.b.b.a.a.a	ENSGT00950000182943.kb.b.b.a.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00950000182943.kb.b.a.b.b.b	ENSGT00950000182943.kb.b.a.b.b.a
Mus_A	ANCESTRAL SPECIES		ENSGT00950000183868	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862	ENSGT00940000159561	ENSGT00950000182943.kb.b.b.a.a.b	ENSGT00950000182943.kb.b.b.a.a.a	ENSGT00950000182943.kb.b.b.a.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00950000182943.kb.b.a.b.b.b	ENSGT00950000182943.kb.b.a.b.b.a
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862	ENSGT00940000159561	ENSGT00950000182943.kb.b.b.a.a.b	ENSGT00950000182943.kb.b.b.a.a.a	ENSGT00950000182943.kb.b.b.a.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00950000182943.kb.b.a.b.b.b	ENSGT00950000182943.kb.b.a.b.b.a
Mouse	MODERN SPECIES	11	Carlr (ENSMUSG00000097638)	Pip4k2a (ENSMUSG00000026737)	Armc3 (ENSMUSG00000037683)	Msrb2 (ENSMUSG00000023094)	Ptf1a (ENSMUSG00000026735)	4921504E06Rik (ENSMUSG00000026734)	Otud1 (ENSMUSG00000043415)	Etl4 (ENSMUSG00000036617)	Arhgap21 (ENSMUSG00000036591)	Enkur (ENSMUSG00000026679)	Thnsl1 (ENSMUSG00000048550)	Gpr158 (ENSMUSG00000045967)	Myo3a (ENSMUSG00000025716)	Gad2 (ENSMUSG00000026787)	Apbb1ip (ENSMUSG00000026786)	Pdss1 (ENSMUSG00000026784) ##22	Abi1 (ENSMUSG00000058835)	Acbd5 (ENSMUSG00000026781)	Mastl (ENSMUSG00000026779)	Yme1l1 (ENSMUSG00000026775)	Potegl (ENSMUSG00000026774)	Nxph2 (ENSMUSG00000069132)	Spopl (ENSMUSG00000026771)	Hnmt (ENSMUSG00000026986)	Tbpl2 (ENSMUSG00000061809)	Il36b (ENSMUSG00000026985)	Il36g (ENSMUSG00000044103)	Il36a (ENSMUSG00000026984)	Il36rn (ENSMUSG00000026983)	Il1f10 (ENSMUSG00000046845)	Il1rn (ENSMUSG00000026981)
Mus_C	ANCESTRAL SPECIES	30	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.b.a.b.a.b.a.b
Steppe mouse	MODERN SPECIES	2490												Gad2 (ENSMSIG00000028019)	ENSMSIG00000028028	Apbb1ip (ENSMSIG00000028030)	ENSMSIG00000028037	Pdss1 (ENSMSIG00000028042) ##22	Abi1 (ENSMSIG00000028051)	Acbd5 (ENSMSIG00000028104)	Mastl (ENSMSIG00000028202)	Yme1l1 (ENSMSIG00000028235)	ENSMSIG00000028257	ENSMSIG00000028260
spretus	MODERN SPECIES	11	Pip4k2a (MGP_SPRETEiJ_G0024124)	MGP_SPRETEiJ_G0024125	Armc3 (MGP_SPRETEiJ_G0024126)	MGP_SPRETEiJ_G0024127	Ptf1a (MGP_SPRETEiJ_G0024128)	4921504E06Rik (MGP_SPRETEiJ_G0024129)	Otud1 (MGP_SPRETEiJ_G0024130)	Etl4 (MGP_SPRETEiJ_G0024131)	Arhgap21 (MGP_SPRETEiJ_G0024132)	Enkur (MGP_SPRETEiJ_G0024133)	Thnsl1 (MGP_SPRETEiJ_G0024134)	Gpr158 (MGP_SPRETEiJ_G0024135)	MGP_SPRETEiJ_G0024136	Gad2 (MGP_SPRETEiJ_G0024137)	Apbb1ip (MGP_SPRETEiJ_G0024138)	Pdss1 (MGP_SPRETEiJ_G0024139) ##22	Abi1 (MGP_SPRETEiJ_G0024140)	Acbd5 (MGP_SPRETEiJ_G0024141)	Mastl (MGP_SPRETEiJ_G0024142)	MGP_SPRETEiJ_G0024143	MGP_SPRETEiJ_G0024144	Nxph2 (MGP_SPRETEiJ_G0024145)	MGP_SPRETEiJ_G0024146	Hnmt (MGP_SPRETEiJ_G0024147)	Tbpl2 (MGP_SPRETEiJ_G0024148)	Il36g (MGP_SPRETEiJ_G0024149)	Il36a (MGP_SPRETEiJ_G0024150)	Il36rn (MGP_SPRETEiJ_G0024151)	Il1f10 (MGP_SPRETEiJ_G0024152)	Il1rn (MGP_SPRETEiJ_G0024153)	Psd4 (MGP_SPRETEiJ_G0024154)
Ryukyu mouse	MODERN SPECIES	11	Pip4k2a (MGP_CAROLIEiJ_G0023209)	MGP_CAROLIEiJ_G0023210	Armc3 (MGP_CAROLIEiJ_G0023211)	Msrb2 (MGP_CAROLIEiJ_G0023212)	Ptf1a (MGP_CAROLIEiJ_G0023213)	4921504E06Rik (MGP_CAROLIEiJ_G0023214)	Otud1 (MGP_CAROLIEiJ_G0023215)	Etl4 (MGP_CAROLIEiJ_G0023216)	Arhgap21 (MGP_CAROLIEiJ_G0023217)	Enkur (MGP_CAROLIEiJ_G0023218)	Thnsl1 (MGP_CAROLIEiJ_G0023219)	Gpr158 (MGP_CAROLIEiJ_G0023220)	Myo3a (MGP_CAROLIEiJ_G0023221)	Gad2 (MGP_CAROLIEiJ_G0023222)	Apbb1ip (MGP_CAROLIEiJ_G0023223)	Pdss1 (MGP_CAROLIEiJ_G0023224) ##22	Abi1 (MGP_CAROLIEiJ_G0023225)	Acbd5 (MGP_CAROLIEiJ_G0023226)	MGP_CAROLIEiJ_G0023227	Nxph2 (MGP_CAROLIEiJ_G0023228)	Spopl (MGP_CAROLIEiJ_G0023229)	Hnmt (MGP_CAROLIEiJ_G0023230)	Tbpl2 (MGP_CAROLIEiJ_G0023231)	Il36g (MGP_CAROLIEiJ_G0023232)	Il36a (MGP_CAROLIEiJ_G0023233)	Il36rn (MGP_CAROLIEiJ_G0023234)	Il1f10 (MGP_CAROLIEiJ_G0023235)	Il1rn (MGP_CAROLIEiJ_G0023236)	Psd4 (MGP_CAROLIEiJ_G0023237)	Pax8 (MGP_CAROLIEiJ_G0023238)	Cacna1b (MGP_CAROLIEiJ_G0023239)
Shrew mouse	MODERN SPECIES	16	Pip4k2a (MGP_PahariEiJ_G0024665)	MGP_PahariEiJ_G0024666	Armc3 (MGP_PahariEiJ_G0024667)	Msrb2 (MGP_PahariEiJ_G0024668)	Ptf1a (MGP_PahariEiJ_G0024669)	4921504E06Rik (MGP_PahariEiJ_G0024670)	Otud1 (MGP_PahariEiJ_G0024671)	Etl4 (MGP_PahariEiJ_G0024672)	Arhgap21 (MGP_PahariEiJ_G0024673)	Enkur (MGP_PahariEiJ_G0024674)	Thnsl1 (MGP_PahariEiJ_G0024675)	Gpr158 (MGP_PahariEiJ_G0024676)	Myo3a (MGP_PahariEiJ_G0024677)	Gad2 (MGP_PahariEiJ_G0024678)	Apbb1ip (MGP_PahariEiJ_G0024679)	Pdss1 (MGP_PahariEiJ_G0024680) ##22	Abi1 (MGP_PahariEiJ_G0024681)	Acbd5 (MGP_PahariEiJ_G0024682)	Mastl (MGP_PahariEiJ_G0024683)	Yme1l1 (MGP_PahariEiJ_G0024684)	Nxph2 (MGP_PahariEiJ_G0024685)	Spopl (MGP_PahariEiJ_G0024686)	MGP_PahariEiJ_G0024687	Hnmt (MGP_PahariEiJ_G0024688)	MGP_PahariEiJ_G0024689	Il36a (MGP_PahariEiJ_G0024690)	MGP_PahariEiJ_G0024691	Il36rn (MGP_PahariEiJ_G0024692)	Il1f10 (MGP_PahariEiJ_G0024693)	Il1rn (MGP_PahariEiJ_G0024694)	MGP_PahariEiJ_G0024695
Rat	MODERN SPECIES	8	Msrb2 (ENSRNOG00000016873)	Ptf1a (ENSRNOG00000016902)	LOC681241 (ENSRNOG00000021898)	Otud1 (ENSRNOG00000016950)	Etl4 (ENSRNOG00000008666)	Arhgap21 (ENSRNOG00000008659)	Prtfdc1 (ENSRNOG00000024874)	Enkur (ENSRNOG00000018631)	Thnsl1 (ENSRNOG00000033076)	RGD1566369 (ENSRNOG00000005017)	Gpr158 (ENSRNOG00000024832)	Myo3a (ENSRNOG00000018478)	LOC108348601 (ENSRNOG00000009861)	Gad2 (ENSRNOG00000018200)	Apbb1ip (ENSRNOG00000017803)	Pdss1 (ENSRNOG00000048849) ##22	Abi1 (ENSRNOG00000031325)	Acbd5 (ENSRNOG00000017642)	Mastl (ENSRNOG00000054474)	Yme1l1 (ENSRNOG00000055012)	Potec (ENSRNOG00000016992)	LOC102549174 (ENSRNOG00000068607)	LOC108353138 (ENSRNOG00000068619)	Edaradd (ENSRNOG00000002624)	LOC120093110 (ENSRNOG00000028913)	LOC120097770 (ENSRNOG00000068936)	LOC120097771 (ENSRNOG00000068312)	Ero1b (ENSRNOG00000002609)	Gpr137b (ENSRNOG00000002480)	Nid1 (ENSRNOG00000002461)	AABR07028902.1 (ENSRNOG00000058094)
Upper Galilee mountains blind mole rat	MODERN SPECIES	766	Pip4k2a (ENSNGAG00000017166)	Armc3 (ENSNGAG00000019613)	Msrb2 (ENSNGAG00000010957)	Ptf1a (ENSNGAG00000019098)	ENSNGAG00000020805	Etl4 (ENSNGAG00000018888)	Arhgap21 (ENSNGAG00000023892)	ENSNGAG00000017519	Enkur (ENSNGAG00000022372)	Thnsl1 (ENSNGAG00000012864)	Gpr158 (ENSNGAG00000015623)	ENSNGAG00000003034	ENSNGAG00000005791	Gad2 (ENSNGAG00000011494)	Apbb1ip (ENSNGAG00000013646)	Pdss1 (ENSNGAG00000009014) ##22	Abi1 (ENSNGAG00000020649)	Acbd5 (ENSNGAG00000023308)	Mastl (ENSNGAG00000021730)	ENSNGAG00000021596	ENSNGAG00000022841	ENSNGAG00000011109	Or2b4 (ENSNGAG00000011618)
Lesser Egyptian jerboa	MODERN SPECIES	72	ENSJJAG00000012725	ENSJJAG00000018286	Otud1 (ENSJJAG00000001123)	ENSJJAG00000018392	ENSJJAG00000010796	Etl4 (ENSJJAG00000019527)	Arhgap21 (ENSJJAG00000011661)	ENSJJAG00000018530	Enkur (ENSJJAG00000017061)	ENSJJAG00000020324	Gpr158 (ENSJJAG00000002089)	ENSJJAG00000020027	ENSJJAG00000018582	Gad2 (ENSJJAG00000018593)	Apbb1ip (ENSJJAG00000012590)	Pdss1 (ENSJJAG00000020874) ##22	Abi1 (ENSJJAG00000019793)	Mastl (ENSJJAG00000017405)	Yme1l1 (ENSJJAG00000021372)	Pard3 (ENSJJAG00000017258)	Nrp1 (ENSJJAG00000022173)	ENSJJAG00000013022	ENSJJAG00000006058	ENSJJAG00000023843	ENSJJAG00000018667
Rodentia_A	ANCESTRAL SPECIES	25	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Hystricomorpha	ANCESTRAL SPECIES	48	ENSGT00900000141099	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158085	ENSGT00940000153272.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00900000141099.e.b	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158085	ENSGT00940000153272.a.a	ENSGT00900000141099.e.a
Guinea pig	MODERN SPECIES	109	MKRN2OS (ENSCPOG00000032819)	ENSCPOG00000009944	FKBP4 (ENSCPOG00000002453)	ITFG2 (ENSCPOG00000021230)	ENSCPOG00000005850	ENSCPOG00000031884	ARHGAP21 (ENSCPOG00000004505)	ENKUR (ENSCPOG00000009590)	ENSCPOG00000000291	GPR158 (ENSCPOG00000001565)	ENSCPOG00000034310	ENSCPOG00000013721	ENSCPOG00000039199	GAD2 (ENSCPOG00000013724)	APBB1IP (ENSCPOG00000004077)	PDSS1 (ENSCPOG00000026219) ##22	ABI1 (ENSCPOG00000014424)	ACBD5 (ENSCPOG00000013800)	ENSCPOG00000033387
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158085	ENSGT00940000153272.a.a	ENSGT00900000141099.e.a
Degu	MODERN SPECIES	186	ARHGAP21 (ENSODEG00000003667)	PRTFDC1 (ENSODEG00000003390)	ENSODEG00000003316	ENSODEG00000003305	ENSODEG00000003243	ENKUR (ENSODEG00000003177)	ENSODEG00000004103	GPR158 (ENSODEG00000004004)	MYO3A (ENSODEG00000003447)	GAD2 (ENSODEG00000002488)	ENSODEG00000002425	ENSODEG00000002394	ENSODEG00000018879	ENSODEG00000002334	APBB1IP (ENSODEG00000002301)	PDSS1 (ENSODEG00000003307) ##22	ABI1 (ENSODEG00000002843)	MASTL (ENSODEG00000002698)	YME1L1 (ENSODEG00000002663)	KLF6 (ENSODEG00000002443)	ENSODEG00000002426	ENSODEG00000002407	ENSODEG00000002349	ENSODEG00000002322	AKR1E2 (ENSODEG00000002292)	ENSODEG00000002199	ENSODEG00000019206	ENSODEG00000005623
Long-tailed chinchilla	MODERN SPECIES	136	ARMC3 (ENSCLAG00000006328)	MSRB2 (ENSCLAG00000005941)	ENSCLAG00000017726	PTF1A (ENSCLAG00000007259)	ENSCLAG00000006751	ENSCLAG00000007180	KIAA1217 (ENSCLAG00000015492)	ENSCLAG00000005271	ENKUR (ENSCLAG00000008963)	THNSL1 (ENSCLAG00000012933)	GPR158 (ENSCLAG00000011756)	MYO3A (ENSCLAG00000005793)	GAD2 (ENSCLAG00000006714)	APBB1IP (ENSCLAG00000007811)	ENSCLAG00000004989	PDSS1 (ENSCLAG00000011631) ##22	ABI1 (ENSCLAG00000010653)	ACBD5 (ENSCLAG00000006783)	MASTL (ENSCLAG00000006587)	YME1L1 (ENSCLAG00000005859)	KLF6 (ENSCLAG00000005515)	AKR1E2 (ENSCLAG00000007303)	ENSCLAG00000006120	ENSCLAG00000009124	ENSCLAG00000010130	ENSCLAG00000007778
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000036882	ARHGAP21 (ENSHGLG00000008443)	ENKUR (ENSHGLG00000005349)	ENSHGLG00000004916	ENSHGLG00000045437	ENSHGLG00000044566	ENSHGLG00000047037	ENSHGLG00000044474	ENSHGLG00000034504	ENSHGLG00000040816	ENSHGLG00000004801	ENSHGLG00000048157	MYO3A (ENSHGLG00000008329)	GAD2 (ENSHGLG00000007030)	APBB1IP (ENSHGLG00000006286)	PDSS1 (ENSHGLG00000004870) ##22	ENSHGLG00000009383	ENSHGLG00000049879	ENSHGLG00000038882	ENSHGLG00000009411	ENSHGLG00000008066	ENSHGLG00000048158	ENSHGLG00000050062	ENSHGLG00000047345
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144.b	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00910000148495
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005017420	OTUD1 (ENSSVLG00005016919)	KIAA1217 (ENSSVLG00005015769)	ARHGAP21 (ENSSVLG00005014772)	ENSSVLG00005014651	PRTFDC1 (ENSSVLG00005014583)	ENKUR (ENSSVLG00005014473)	THNSL1 (ENSSVLG00005014444)	ENSSVLG00005014402	GPR158 (ENSSVLG00005014159)	ENSSVLG00005014103	ENSSVLG00005014026	GAD2 (ENSSVLG00005013824)	APBB1IP (ENSSVLG00005013617)	ENSSVLG00005013262	PDSS1 (ENSSVLG00005013153) ##22	ABI1 (ENSSVLG00005012684)	ENSSVLG00005012546	ACBD5 (ENSSVLG00005012182)	MASTL (ENSSVLG00005011787)	YME1L1 (ENSSVLG00005011675)	ENSSVLG00005011610	CCDC3 (ENSSVLG00005011541)	ENSSVLG00005011462	CAMK1D (ENSSVLG00005011210)	CDC123 (ENSSVLG00005011124)	NUDT5 (ENSSVLG00005011015)	SEC61A2 (ENSSVLG00005010635)	DHTKD1 (ENSSVLG00005010483)	UPF2 (ENSSVLG00005010430)	PROSER2 (ENSSVLG00005010392)
Marmotini	ANCESTRAL SPECIES	21	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144.b	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00910000148495
Marmotini_b	ANCESTRAL SPECIES	15	ENSGT00940000161673	ENSGT00390000006922.m.a	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144.b	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715	ENSGT00940000155461.E
Arctic ground squirrel	MODERN SPECIES	388														APBB1IP (ENSUPAG00010007196)	ENSUPAG00010007244	PDSS1 (ENSUPAG00010007288) ##22	ABI1 (ENSUPAG00010007329)	ACBD5 (ENSUPAG00010008177)	MASTL (ENSUPAG00010008481)	YME1L1 (ENSUPAG00010008503)	CCDC3 (ENSUPAG00010008567)	ENSUPAG00010008574	CAMK1D (ENSUPAG00010008583)	CDC123 (ENSUPAG00010008644)	NUDT5 (ENSUPAG00010008681)	SEC61A2 (ENSUPAG00010008719)	DHTKD1 (ENSUPAG00010008790)	UPF2 (ENSUPAG00010008867)	ENSUPAG00010008890	PROSER2 (ENSUPAG00010008896)	ECHDC3 (ENSUPAG00010008927)
Squirrel	MODERN SPECIES	84							KIAA1217 (ENSSTOG00000013522)	ARHGAP21 (ENSSTOG00000003561)	PRTFDC1 (ENSSTOG00000033462)	ENKUR (ENSSTOG00000009536)	THNSL1 (ENSSTOG00000023171)	GPR158 (ENSSTOG00000005358)	MYO3A (ENSSTOG00000000004)	GAD2 (ENSSTOG00000002059)	APBB1IP (ENSSTOG00000010611)	PDSS1 (ENSSTOG00000001698) ##22	ABI1 (ENSSTOG00000028045)	ACBD5 (ENSSTOG00000010609)	MASTL (ENSSTOG00000010601)	YME1L1 (ENSSTOG00000027471)	CCDC3 (ENSSTOG00000031030)	CAMK1D (ENSSTOG00000016481)	CDC123 (ENSSTOG00000016480)	NUDT5 (ENSSTOG00000016479)	SEC61A2 (ENSSTOG00000016476)	DHTKD1 (ENSSTOG00000016473)	UPF2 (ENSSTOG00000013075)	ENSSTOG00000021094	PROSER2 (ENSSTOG00000021219)	ECHDC3 (ENSSTOG00000009983)	USP6NL (ENSSTOG00000001581)
Alpin marmot	MODERN SPECIES	41	SPAG6 (ENSMMMG00000018052)	ENSMMMG00000018037	ARMC3 (ENSMMMG00000017996)	MSRB2 (ENSMMMG00000017958)	OTUD1 (ENSMMMG00000017947)	KIAA1217 (ENSMMMG00000017490)	ARHGAP21 (ENSMMMG00000017086)	PRTFDC1 (ENSMMMG00000017057)	ENKUR (ENSMMMG00000017053)	THNSL1 (ENSMMMG00000017047)	GPR158 (ENSMMMG00000017029)	ENSMMMG00000017022	MYO3A (ENSMMMG00000017006)	GAD2 (ENSMMMG00000016992)	APBB1IP (ENSMMMG00000016974)	ENSMMMG00000016962 ##22	ENSMMMG00000016956	ABI1 (ENSMMMG00000016889)	ACBD5 (ENSMMMG00000016830)	MASTL (ENSMMMG00000016812)	YME1L1 (ENSMMMG00000016800)	CCDC3 (ENSMMMG00000016796)	CAMK1D (ENSMMMG00000016767)	CDC123 (ENSMMMG00000016751)	NUDT5 (ENSMMMG00000016744)	SEC61A2 (ENSMMMG00000016702)	DHTKD1 (ENSMMMG00000016651)	UPF2 (ENSMMMG00000016627)	PROSER2 (ENSMMMG00000016619)	ECHDC3 (ENSMMMG00000016609)	USP6NL (ENSMMMG00000016577)
Laurasiatheria	ANCESTRAL SPECIES	27	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031	ENSGT00940000159227	ENSGT00940000158806
Eulipotyphla	ANCESTRAL SPECIES	989																ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A
Hedgehog	MODERN SPECIES	4475																ENSEEUG00000002570 ##22	ABI1 (ENSEEUG00000002628)
Common shrew	MODERN SPECIES	5805															ENSSARG00000011265	PDSS1 (ENSSARG00000011287) ##22	ABI1 (ENSSARG00000011295)
Laurasiatheria_a	ANCESTRAL SPECIES	22	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00390000003031	ENSGT00940000159227	ENSGT00940000158806
Artiodactyla	ANCESTRAL SPECIES	27	ENSGT00940000161000	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00860000136052	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b
Suina	ANCESTRAL SPECIES	44	ENSGT00900000141099	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Chacoan peccary	MODERN SPECIES	48	PIP4K2A (ENSCWAG00000006142)	ARMC3 (ENSCWAG00000005912)	MSRB2 (ENSCWAG00000005884)	PTF1A (ENSCWAG00000005861)	OTUD1 (ENSCWAG00000005832)	KIAA1217 (ENSCWAG00000004897)	ARHGAP21 (ENSCWAG00000003379)	ENSCWAG00000003369	PRTFDC1 (ENSCWAG00000003354)	ENKUR (ENSCWAG00000003334)	THNSL1 (ENSCWAG00000003329)	GPR158 (ENSCWAG00000003292)	ENSCWAG00000003264	GAD2 (ENSCWAG00000003224)	APBB1IP (ENSCWAG00000003183)	PDSS1 (ENSCWAG00000003156) ##22	ABI1 (ENSCWAG00000002988)	ACBD5 (ENSCWAG00000002902)	MASTL (ENSCWAG00000002823)	YME1L1 (ENSCWAG00000002781)	ENSCWAG00000002741	OPTN (ENSCWAG00000002673)	MCM10 (ENSCWAG00000002570)	UCMA (ENSCWAG00000002531)	PHYH (ENSCWAG00000002511)	SEPHS1 (ENSCWAG00000002484)	BEND7 (ENSCWAG00000002446)	PRPF18 (ENSCWAG00000002422)	FRMD4A (ENSCWAG00000002339)	ENSCWAG00000002298	FAM107B (ENSCWAG00000002277)
Pig	MODERN SPECIES	1	MSRB2 (ENSSSCG00000011077)	PTF1A (ENSSSCG00000030662)	ENSSSCG00000058253	OTUD1 (ENSSSCG00000011076)	KIAA1217 (ENSSSCG00000011075)	ARHGAP21 (ENSSSCG00000011074)	ENSSSCG00000059535	ENSSSCG00000037690	PRTFDC1 (ENSSSCG00000028135)	ENKUR (ENSSSCG00000032929)	THNSL1 (ENSSSCG00000011071)	GPR158 (ENSSSCG00000038536)	ENSSSCG00000011059	GAD2 (ENSSSCG00000011060)	APBB1IP (ENSSSCG00000030156)	PDSS1 (ENSSSCG00000011061) ##22	ABI1 (ENSSSCG00000024127)	ACBD5 (ENSSSCG00000011064)	MASTL (ENSSSCG00000011065)	ENSSSCG00000011068	OPTN (ENSSSCG00000023247)	MCM10 (ENSSSCG00000035059)	UCMA (ENSSSCG00000038864)	PHYH (ENSSSCG00000039244)	SEPHS1 (ENSSSCG00000031659)	BEND7 (ENSSSCG00000032984)	PRPF18 (ENSSSCG00000026354)	FRMD4A (ENSSSCG00000011056)	ENSSSCG00000045051	ENSSSCG00000039658	MSANTD7 (ENSSSCG00000057274)
Artiodactyla_a	ANCESTRAL SPECIES	29	ENSGT00940000161000	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00910000148022	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00860000136052	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b
Camelidae	ANCESTRAL SPECIES	119													ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a
Arabian camel	MODERN SPECIES	28	ENSCDRG00005007947	ENSCDRG00005008009	HACD1 (ENSCDRG00005008055)	STAM (ENSCDRG00005008211)	TMEM236 (ENSCDRG00005008298)	MRC1 (ENSCDRG00005008354)	ENSCDRG00005008514	GPR158 (ENSCDRG00005008574)	ENSCDRG00005008599	ENSCDRG00005008660	MYO3A (ENSCDRG00005008724)	ENSCDRG00005009230	ENSCDRG00005009271	GAD2 (ENSCDRG00005009327)	APBB1IP (ENSCDRG00005009629)	PDSS1 (ENSCDRG00005009781) ##22	ABI1 (ENSCDRG00005010036)	ACBD5 (ENSCDRG00005011208)	MASTL (ENSCDRG00005011932)	YME1L1 (ENSCDRG00005012057)	ENSCDRG00005012217	NSUN6 (ENSCDRG00005012397)	CACNB2 (ENSCDRG00005012541)	ENSCDRG00005013694	ENSCDRG00005013717	ENSCDRG00005013781	THNSL1 (ENSCDRG00005013900)	ENKUR (ENSCDRG00005013924)	PRTFDC1 (ENSCDRG00005014044)	ARHGAP21 (ENSCDRG00005014230)	KIAA1217 (ENSCDRG00005014673)
Alpaca	MODERN SPECIES	3144													MYO3A (ENSVPAG00000010789)	GAD2 (ENSVPAG00000010790)	ENSVPAG00000010791	PDSS1 (ENSVPAG00000010793) ##22	ABI1 (ENSVPAG00000010795)
Artiodactyla_b	ANCESTRAL SPECIES	27	ENSGT00440000033408.a	ENSGT00940000158809	ENSGT00940000165398	ENSGT00940000157567	ENSGT00390000009751	ENSGT00940000164808	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00860000136052	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b	ENSGT00940000157926
Pecora	ANCESTRAL SPECIES	9	ENSGT00440000033408.a	ENSGT00940000158809	ENSGT00940000165398	ENSGT00940000157567	ENSGT00390000009751	ENSGT00940000164808	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a.c.b.b	ENSGT00940000153661.a.a.c.b.a.a	ENSGT00940000153661.b.b	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b
Percora_a	ANCESTRAL SPECIES	10	ENSGT00440000033408.a	ENSGT00940000158809	ENSGT00940000165398	ENSGT00940000157567	ENSGT00390000009751	ENSGT00940000164808	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a.c.b.b	ENSGT00940000153661.a.a.c.a	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b	ENSGT00940000157926
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1196															ENSMMSG00000013601	ENSMMSG00000013744 ##22	ABI1 (ENSMMSG00000013821)	ACBD5 (ENSMMSG00000014160)	MASTL (ENSMMSG00000014370)	YME1L1 (ENSMMSG00000014422)	ENSMMSG00000014498	ENSMMSG00000014525	ENSMMSG00000014604	CCDC3 (ENSMMSG00000014681)	CAMK1D (ENSMMSG00000014701)	CDC123 (ENSMMSG00000014751)	ENSMMSG00000014832	NUDT5 (ENSMMSG00000014844)	SEC61A2 (ENSMMSG00000014875)	DHTKD1 (ENSMMSG00000014936)	UPF2 (ENSMMSG00000014985)
Siberian musk deer	MODERN SPECIES	329	ENSMMSG00000004460	ENSMMSG00000004434	SMC2 (ENSMMSG00000004365)	ENSMMSG00000004340	ENSMMSG00000015055	ENSMMSG00000014982	GRIN3A (ENSMMSG00000014965)	RNF20 (ENSMMSG00000014924)	PGAP4 (ENSMMSG00000014914)	ALDOB (ENSMMSG00000014889)	ZNF189 (ENSMMSG00000014882)	ENSMMSG00000014856	MRPL50 (ENSMMSG00000014849)	ENSMMSG00000014296	PLPPR1 (ENSMMSG00000014248)	ENSMMSG00000014236 ##22
Bovidae	ANCESTRAL SPECIES	10	ENSGT00440000033408.a	ENSGT00940000158809	ENSGT00940000165398	ENSGT00940000157567	ENSGT00390000009751	ENSGT00940000164808	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a.c.b.b	ENSGT00940000153661.a.a.c.a	ENSGT00940000153661.a.a.c.b.a.a.b	ENSGT00940000153661.b.b	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318
Caprinae	ANCESTRAL SPECIES	23	ENSGT00940000154775.c.b	ENSGT00440000033408.a	ENSGT00940000158809	ENSGT00940000165398	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926.s	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a.c.a	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b	ENSGT00950000183125.a	ENSGT00530000064318	ENSGT00940000154315.b	ENSGT00940000157926	ENSGT00940000156715
Goat	MODERN SPECIES	4	PLXDC2 (ENSCHIG00000023670)	MALRD1 (ENSCHIG00000021485)	ENSCHIG00000024989	ENSCHIG00000009726	ARL5B (ENSCHIG00000026796)	ENSCHIG00000019225	ITGB1 (ENSCHIG00000010934)	NRP1 (ENSCHIG00000008067)	PARD3 (ENSCHIG00000019203)	ENSCHIG00000012681	CREM (ENSCHIG00000017312)	ENSCHIG00000004500	CCNY (ENSCHIG00000008925)	APBB1IP (ENSCHIG00000005373)	ENSCHIG00000024157	PDSS1 (ENSCHIG00000021352) ##22	ENSCHIG00000004703	ABI1 (ENSCHIG00000015241)	ACBD5 (ENSCHIG00000023769)	MASTL (ENSCHIG00000011834)	YME1L1 (ENSCHIG00000026882)	ENSCHIG00000022895	CCDC3 (ENSCHIG00000009477)	ENSCHIG00000017494	CAMK1D (ENSCHIG00000007318)	CDC123 (ENSCHIG00000021825)	NUDT5 (ENSCHIG00000014304)	SEC61A2 (ENSCHIG00000015372)	ENSCHIG00000011020	DHTKD1 (ENSCHIG00000012430)	PROSER2 (ENSCHIG00000025390)
Rambouillet Sheep	MODERN SPECIES	4	NEBL (ENSOARG00020023328)	ENSOARG00020023295	PLXDC2 (ENSOARG00020023004)	ENSOARG00020022950	ARL5B (ENSOARG00020022913)	ITGB1 (ENSOARG00020022585)	NRP1 (ENSOARG00020022479)	PARD3 (ENSOARG00020014835)	ENSOARG00020014597	CUL2 (ENSOARG00020014397)	CREM (ENSOARG00020011207)	ENSOARG00020011089	CCNY (ENSOARG00020010831)	APBB1IP (ENSOARG00020010637)	ENSOARG00020010596	PDSS1 (ENSOARG00020010480) ##22	ABI1 (ENSOARG00020009594)	ENSOARG00020009111	MASTL (ENSOARG00020008948)	YME1L1 (ENSOARG00020008735)	ENSOARG00020008696	ENSOARG00020007712	ENSOARG00020007621	ENSOARG00020007584	CCDC3 (ENSOARG00020007549)	PRR13 (ENSOARG00020007540)	CAMK1D (ENSOARG00020007391)	CDC123 (ENSOARG00020007274)	NUDT5 (ENSOARG00020007141)	SEC61A2 (ENSOARG00020006097)	DHTKD1 (ENSOARG00020005895)
Bovinae	ANCESTRAL SPECIES	20	ENSGT00440000033408.a	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751	ENSGT00940000164808	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000172076	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000154800.bb	ENSGT00940000153661.a.a.c.b.b
Bos	ANCESTRAL SPECIES	22	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751.b	ENSGT00940000164808	ENSGT00390000009751.a	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000172076	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000154800.bb	ENSGT00940000153661.a.a.c.b.b	ENSGT00390000011669	ENSGT00390000000121	ENSGT00390000018872	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT01100000263480.a.b.a.b.b.b.b.b.b.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000165398	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751.b	ENSGT00940000164808	ENSGT00390000009751.a	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000154800.bb	ENSGT00940000153661.a.a.c.b.b	ENSGT00940000153661.a.a.c.b.a.a.b.b	ENSGT00390000011669	ENSGT00390000000121	ENSGT00390000018872	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT01100000263480.a.b.a.b.b.b.b.b.b.b	ENSGT00940000157638	ENSGT00940000158123
Cow	MODERN SPECIES	4	PLXDC2 (ENSBTAG00000009475)	ENSBTAG00000037969	ARL5B (ENSBTAG00000043964)	ENSBTAG00000052951	ENSBTAG00000002675	ITGB1 (ENSBTAG00000015910)	NRP1 (ENSBTAG00000019866)	ENSBTAG00000048624	PARD3 (ENSBTAG00000014991)	CUL2 (ENSBTAG00000007133)	CREM (ENSBTAG00000016060)	ENSBTAG00000055226	CCNY (ENSBTAG00000005492)	APBB1IP (ENSBTAG00000012526)	ENSBTAG00000048553	PDSS1 (ENSBTAG00000006529) ##22	ABI1 (ENSBTAG00000005136)	ACBD5 (ENSBTAG00000017278)	MASTL (ENSBTAG00000017271)	YME1L1 (ENSBTAG00000016445)	ENSBTAG00000053950	ANKRD26 (ENSBTAG00000008288)	FBH1 (ENSBTAG00000004147)	IL15RA (ENSBTAG00000006078)	IL2RA (ENSBTAG00000020892)	RBM17 (ENSBTAG00000021951)	PFKFB3 (ENSBTAG00000008401)	PRKCQ (ENSBTAG00000010664)	SFMBT2 (ENSBTAG00000005915)	ITIH5 (ENSBTAG00000013004)	ENSBTAG00000051759
Hybrid Bos Indicus	MODERN SPECIES	4	ENSBIXG00005021059	ENSBIXG00005020894	ITGB1 (ENSBIXG00005020801)	ENSBIXG00005020672	ENSBIXG00005006260	ENSBIXG00005003491	NRP1 (ENSBIXG00005020622)	PARD3 (ENSBIXG00005003383)	ENSBIXG00005017119	ENSBIXG00005007049	CUL2 (ENSBIXG00005017071)	CREM (ENSBIXG00005016872)	CCNY (ENSBIXG00005015896)	APBB1IP (ENSBIXG00005005422)	ENSBIXG00005002483	PDSS1 (ENSBIXG00005015772) ##22	ABI1 (ENSBIXG00005015688)	ACBD5 (ENSBIXG00005015331)	MASTL (ENSBIXG00005015275)	YME1L1 (ENSBIXG00005015237)	ENSBIXG00005015158	ENSBIXG00005002207	ENSBIXG00005014990	ENSBIXG00005002190	ENSBIXG00005014934	ENSBIXG00005014839	ENSBIXG00005014785	FBH1 (ENSBIXG00005014738)	ENSBIXG00005002050	IL2RA (ENSBIXG00005005420)	RBM17 (ENSBIXG00005014607)
Bos_a	ANCESTRAL SPECIES	67	ENSGT00960000190920	ENSGT00440000033408.a	ENSGT00940000165398	ENSGT00940000157567	ENSGT00390000009751.b	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000172076	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a.c.b.b	ENSGT00390000011669	ENSGT00390000000121	ENSGT00390000018872	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT01100000263480.a.b.a.b.b.b.b.b.b.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000153783.b.b.c.b.a.b
Domestic yak	MODERN SPECIES	3	ENSBGRG00000025653	ENSBGRG00000025641	ENSBGRG00000025471	ENSBGRG00000024687	BMI1 (ENSBGRG00000022726)	COMMD3 (ENSBGRG00000022691)	ENSBGRG00000021697	ENSBGRG00000021543	NEBL (ENSBGRG00000020572)	ENSBGRG00000019928	ENSBGRG00000019555	ENSBGRG00000016604	ENSBGRG00000014932	CREM (ENSBGRG00000014601)	CCNY (ENSBGRG00000014486)	PDSS1 (ENSBGRG00000014215) ##22	ABI1 (ENSBGRG00000014062)	ACBD5 (ENSBGRG00000013550)	ENSBGRG00000012382	FBH1 (ENSBGRG00000012045)	ENSBGRG00000011893	IL2RA (ENSBGRG00000011736)	RBM17 (ENSBGRG00000011653)	PFKFB3 (ENSBGRG00000010811)	ENSBGRG00000010722	PRKCQ (ENSBGRG00000010059)	SFMBT2 (ENSBGRG00000015872)	ITIH5 (ENSBGRG00000015708)	ENSBGRG00000015683	ITIH2 (ENSBGRG00000015293)	KIN (ENSBGRG00000015012)
Wild yak	MODERN SPECIES	1921								PARD3 (ENSBMUG00000002381)	ENSBMUG00000002467	CUL2 (ENSBMUG00000002583)	CREM (ENSBMUG00000002895)	ENSBMUG00000002958	CCNY (ENSBMUG00000002969)	APBB1IP (ENSBMUG00000003007)	ENSBMUG00000003022	PDSS1 (ENSBMUG00000003055) ##22	ABI1 (ENSBMUG00000003473)	ACBD5 (ENSBMUG00000003825)	MASTL (ENSBMUG00000003921)	YME1L1 (ENSBMUG00000004003)	ENSBMUG00000004049	ENSBMUG00000004119
American bison	MODERN SPECIES	3321	ENSBBBG00000014820	PLXDC2 (ENSBBBG00000014853)	MALRD1 (ENSBBBG00000014908)	ARL5B (ENSBBBG00000001230)	ENSBBBG00000001103	ITGB1 (ENSBBBG00000001028)	NRP1 (ENSBBBG00000000824)	ENSBBBG00000014924	ENSBBBG00000000815	PARD3 (ENSBBBG00000015588)	CUL2 (ENSBBBG00000002623)	ENSBBBG00000015988	ENSBBBG00000016017	CCNY (ENSBBBG00000003986)	APBB1IP (ENSBBBG00000016064)	PDSS1 (ENSBBBG00000016082) ##22	ABI1 (ENSBBBG00000016574)	ACBD5 (ENSBBBG00000016633)	MASTL (ENSBBBG00000016706)	YME1L1 (ENSBBBG00000008508)	ENSBBBG00000008922	ENSBBBG00000016779	ENSBBBG00000009063
Yarkand deer	MODERN SPECIES	15	ENSCHYG00000005509	ENSCHYG00000005502	PLXDC2 (ENSCHYG00000005454)	MALRD1 (ENSCHYG00000005277)	ARL5B (ENSCHYG00000005215)	ENSCHYG00000027069	ITGB1 (ENSCHYG00000027043)	NRP1 (ENSCHYG00000027020)	ENSCHYG00000026825	CUL2 (ENSCHYG00000026609)	CREM (ENSCHYG00000026224)	ENSCHYG00000026118	CCNY (ENSCHYG00000026069)	ENSCHYG00000026037	APBB1IP (ENSCHYG00000026026)	PDSS1 (ENSCHYG00000026000) ##22	ABI1 (ENSCHYG00000025839)	ACBD5 (ENSCHYG00000025711)	MASTL (ENSCHYG00000025649)	YME1L1 (ENSCHYG00000025596)	ENSCHYG00000025577	ENSCHYG00000025114	ENSCHYG00000025051	CCDC3 (ENSCHYG00000025017)	ENSCHYG00000025004	CAMK1D (ENSCHYG00000024819)	CDC123 (ENSCHYG00000024668)	SEC61A2 (ENSCHYG00000024563)	NUDT5 (ENSCHYG00000024455)	DHTKD1 (ENSCHYG00000024382)	UPF2 (ENSCHYG00000024075)
Cetacea	ANCESTRAL SPECIES	2	ENSGT01000000221977	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b.g.b	ENSGT00860000136052	ENSGT00390000003721.d.b.g.a	ENSGT00950000183125.a	ENSGT00530000064318
Odontoceti	ANCESTRAL SPECIES	2	ENSGT01000000221977	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b.g.b	ENSGT00860000136052	ENSGT00390000003721.d.b.g.a	ENSGT00950000183125.a	ENSGT00530000064318
Sperm whale	MODERN SPECIES	2	ENSPCTG00005002333	ARL5B (ENSPCTG00005002340)	ENSPCTG00005002358	ENSPCTG00005002374	ITGB1 (ENSPCTG00005002403)	NRP1 (ENSPCTG00005002507)	PARD3 (ENSPCTG00005002619)	ENSPCTG00005002846	CUL2 (ENSPCTG00005002857)	ENSPCTG00005002888	CREM (ENSPCTG00005002909)	ENSPCTG00005002949	CCNY (ENSPCTG00005002975)	APBB1IP (ENSPCTG00005003012)	ENSPCTG00005003054	PDSS1 (ENSPCTG00005003112) ##22	ABI1 (ENSPCTG00005003169)	ACBD5 (ENSPCTG00005003290)	MASTL (ENSPCTG00005003386)	YME1L1 (ENSPCTG00005003413)	ENSPCTG00005003455	ENSPCTG00005003480	ENSPCTG00005003506	CCDC3 (ENSPCTG00005003513)	CAMK1D (ENSPCTG00005003528)	CDC123 (ENSPCTG00005003548)	NUDT5 (ENSPCTG00005003572)	SEC61A2 (ENSPCTG00005003601)	DHTKD1 (ENSPCTG00005003657)	UPF2 (ENSPCTG00005003703)	PROSER2 (ENSPCTG00005003747)
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT01000000221977	ENSGT00940000158809.i	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b.g.b	ENSGT00860000136052	ENSGT00390000003721.d.b.g.a	ENSGT00950000183125.a	ENSGT00530000064318
Dolphin	MODERN SPECIES	2224															APBB1IP (ENSTTRG00000003084)	PDSS1 (ENSTTRG00000003085) ##22	ABI1 (ENSTTRG00000003088)
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT01000000221977	ENSGT00940000158809.i	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b	ENSGT00390000014165.c.a.b.b.b.e.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b.g.b.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.a	ENSGT00950000183125.a
Vaquita	MODERN SPECIES	11	ENSPSNG00000009320	ENSPSNG00000009393	ITGB1 (ENSPSNG00000009566)	NRP1 (ENSPSNG00000009847)	PARD3 (ENSPSNG00000010628)	ENSPSNG00000014206	ENSPSNG00000014262	CUL2 (ENSPSNG00000014334)	CREM (ENSPSNG00000014684)	ENSPSNG00000016206	ENSPSNG00000016245	CCNY (ENSPSNG00000016274)	ENSPSNG00000016308	APBB1IP (ENSPSNG00000016358)	ENSPSNG00000016582	PDSS1 (ENSPSNG00000016619) ##22	ABI1 (ENSPSNG00000016723)	ACBD5 (ENSPSNG00000016966)	MASTL (ENSPSNG00000017353)	YME1L1 (ENSPSNG00000017478)	ENSPSNG00000017613	ENSPSNG00000017653	CCDC3 (ENSPSNG00000017725)	ENSPSNG00000017768	CAMK1D (ENSPSNG00000017788)	ENSPSNG00000017826	CDC123 (ENSPSNG00000017878)	NUDT5 (ENSPSNG00000017967)	ENSPSNG00000018039	ENSPSNG00000018133	DHTKD1 (ENSPSNG00000018287)
Monodontidae	ANCESTRAL SPECIES	22	ENSGT01000000221977	ENSGT00940000158809.i	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a	ENSGT01030000234637.a.b.b.r	ENSGT00390000014429.b	ENSGT00390000014165.c.a.b.b.b.e.b	ENSGT00940000156776	ENSGT00390000003057	ENSGT00940000154045.a	ENSGT00390000003721.d.b.g.b.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.a	ENSGT00950000183125.a
Narwhal	MODERN SPECIES	308	ENSMMNG00015015028	MALRD1 (ENSMMNG00015015069)	ARL5B (ENSMMNG00015015129)	ENSMMNG00015015193	ITGB1 (ENSMMNG00015015280)	NRP1 (ENSMMNG00015015364)	PARD3 (ENSMMNG00015015482)	ENSMMNG00015015621	ENSMMNG00015015634	CUL2 (ENSMMNG00015015681)	CREM (ENSMMNG00015015981)	ENSMMNG00015016421	ENSMMNG00015016440	CCNY (ENSMMNG00015016474)	APBB1IP (ENSMMNG00015016536)	PDSS1 (ENSMMNG00015016593) ##22	ABI1 (ENSMMNG00015016765)	ACBD5 (ENSMMNG00015016999)	MASTL (ENSMMNG00015017123)	YME1L1 (ENSMMNG00015017184)	ENSMMNG00015017231	ANKRD26 (ENSMMNG00015017325)	CCDC3 (ENSMMNG00015017596)	ENSMMNG00015015568	CAMK1D (ENSMMNG00015015592)	CDC123 (ENSMMNG00015015640)	NUDT5 (ENSMMNG00015015714)	ENSMMNG00015015766	ENSMMNG00015015938	DHTKD1 (ENSMMNG00015016221)	UPF2 (ENSMMNG00015016353)
Beluga whale	MODERN SPECIES	22	ARL5B (ENSDLEG00000004980)	ENSDLEG00000004974	ENSDLEG00000004949	ITGB1 (ENSDLEG00000004934)	NRP1 (ENSDLEG00000004921)	ENSDLEG00000004913	PARD3 (ENSDLEG00000004836)	ENSDLEG00000004816	CUL2 (ENSDLEG00000004800)	CREM (ENSDLEG00000004793)	ENSDLEG00000004786	ENSDLEG00000004780	CCNY (ENSDLEG00000004766)	APBB1IP (ENSDLEG00000004755)	ENSDLEG00000004733	PDSS1 (ENSDLEG00000004718) ##22	ABI1 (ENSDLEG00000004700)	ACBD5 (ENSDLEG00000004686)	MASTL (ENSDLEG00000004669)	ENSDLEG00000004666	YME1L1 (ENSDLEG00000004656)	ANKRD26 (ENSDLEG00000004565)	ENSDLEG00000004527	CCDC3 (ENSDLEG00000004525)	CAMK1D (ENSDLEG00000004516)	CDC123 (ENSDLEG00000004498)	NUDT5 (ENSDLEG00000004487)	ENSDLEG00000004478	ENSDLEG00000004463	DHTKD1 (ENSDLEG00000004431)	UPF2 (ENSDLEG00000004415)
Blue whale	MODERN SPECIES	11	MALRD1 (ENSBMSG00010004478)	ARL5B (ENSBMSG00010004528)	ENSBMSG00010004573	ITGB1 (ENSBMSG00010004703)	NRP1 (ENSBMSG00010004765)	PARD3 (ENSBMSG00010004796)	ENSBMSG00010004829	CUL2 (ENSBMSG00010004845)	CREM (ENSBMSG00010004910)	ENSBMSG00010005098	ENSBMSG00010005102	CCNY (ENSBMSG00010005110)	ENSBMSG00010005118	APBB1IP (ENSBMSG00010005134)	ENSBMSG00010005151	PDSS1 (ENSBMSG00010005161) ##22	ABI1 (ENSBMSG00010005189)	ACBD5 (ENSBMSG00010005242)	MASTL (ENSBMSG00010005274)	YME1L1 (ENSBMSG00010005370)	ENSBMSG00010005060	ENSBMSG00010005091	CCDC3 (ENSBMSG00010005136)	ENSBMSG00010005145	CAMK1D (ENSBMSG00010005156)	CDC123 (ENSBMSG00010005181)	ENSBMSG00010005208	ENSBMSG00010005247	DHTKD1 (ENSBMSG00010005281)	UPF2 (ENSBMSG00010005302)	PROSER2 (ENSBMSG00010005318)
Laurasiatheria_b	ANCESTRAL SPECIES	22	ENSGT00940000161000	ENSGT00940000167080	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Carnivora	ANCESTRAL SPECIES	26	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00390000009588.gb	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Panthera	ANCESTRAL SPECIES		ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00390000009588.gb	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Tiger	MODERN SPECIES	159	SPAG6 (ENSPTIG00000020250)	PIP4K2A (ENSPTIG00000006682)	ARMC3 (ENSPTIG00000008047)	MSRB2 (ENSPTIG00000018979)	KIAA1217 (ENSPTIG00000020562)	ARHGAP21 (ENSPTIG00000008700)	PRTFDC1 (ENSPTIG00000014951)	ENKUR (ENSPTIG00000017396)	THNSL1 (ENSPTIG00000003043)	ENSPTIG00000019629	ENSPTIG00000020958	MYO3A (ENSPTIG00000002364)	GAD2 (ENSPTIG00000007304)	ENSPTIG00000008638	ENSPTIG00000009210	PDSS1 (ENSPTIG00000010573) ##22	ABI1 (ENSPTIG00000012343)	ACBD5 (ENSPTIG00000018396)	ENSPTIG00000020909	MASTL (ENSPTIG00000021138)	YME1L1 (ENSPTIG00000007517)	ANKRD26 (ENSPTIG00000011276)
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00390000009588.gb	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
lion	MODERN SPECIES	7	MSRB2 (ENSPLOG00000020926)	PTF1A (ENSPLOG00000020972)	ENSPLOG00000020993	OTUD1 (ENSPLOG00000021042)	ENSPLOG00000021141	KIAA1217 (ENSPLOG00000021397)	ARHGAP21 (ENSPLOG00000021999)	PRTFDC1 (ENSPLOG00000022050)	ENKUR (ENSPLOG00000022091)	THNSL1 (ENSPLOG00000022106)	GPR158 (ENSPLOG00000022120)	MYO3A (ENSPLOG00000022157)	GAD2 (ENSPLOG00000022227)	APBB1IP (ENSPLOG00000022278)	ENSPLOG00000022303	PDSS1 (ENSPLOG00000022315) ##22	ABI1 (ENSPLOG00000022397)	ACBD5 (ENSPLOG00000022509)	ENSPLOG00000022541	MASTL (ENSPLOG00000022550)	YME1L1 (ENSPLOG00000022568)	ENSPLOG00000022583	RAB18 (ENSPLOG00000022590)	MKX (ENSPLOG00000022600)	ODAD2 (ENSPLOG00000022628)	MPP7 (ENSPLOG00000022647)	WAC (ENSPLOG00000000751)	BAMBI (ENSPLOG00000000795)	ENSPLOG00000000819	MAP3K8 (ENSPLOG00000000834)	MTPAP (ENSPLOG00000000850)
leopard	MODERN SPECIES	45																PDSS1 (ENSPPRG00000002175) ##22	ENSPPRG00000002373	ABI1 (ENSPPRG00000004886)	ENSPPRG00000005885	ACBD5 (ENSPPRG00000006501)	MASTL (ENSPPRG00000007415)	YME1L1 (ENSPPRG00000008111)	ANKRD26 (ENSPPRG00000009393)	ENSPPRG00000009693	RAB18 (ENSPPRG00000010314)	MKX (ENSPPRG00000010709)	ODAD2 (ENSPPRG00000011902)	MPP7 (ENSPPRG00000012483)	WAC (ENSPPRG00000013451)	BAMBI (ENSPPRG00000013667)	ENSPPRG00000014725
Cat	MODERN SPECIES	238	ENSFCAG00000028261	PTF1A (ENSFCAG00000041713)	CB4H10orf67 (ENSFCAG00000003780)	ENSFCAG00000033075	OTUD1 (ENSFCAG00000041511)	KIAA1217 (ENSFCAG00000010412)	ARHGAP21 (ENSFCAG00000022446)	PRTFDC1 (ENSFCAG00000000562)	ENKUR (ENSFCAG00000036128)	THNSL1 (ENSFCAG00000032035)	GPR158 (ENSFCAG00000026599)	MYO3A (ENSFCAG00000002336)	GAD2 (ENSFCAG00000002337)	APBB1IP (ENSFCAG00000008212)	ENSFCAG00000031397	PDSS1 (ENSFCAG00000012126) ##22	ABI1 (ENSFCAG00000029513)	ACBD5 (ENSFCAG00000012444)	ENSFCAG00000041151	MASTL (ENSFCAG00000014240)	YME1L1 (ENSFCAG00000014238)	ENSFCAG00000040569	RAB18 (ENSFCAG00000027161)	MKX (ENSFCAG00000004227)	ODAD2 (ENSFCAG00000031885)	MPP7 (ENSFCAG00000008868)	WAC (ENSFCAG00000023101)	BAMBI (ENSFCAG00000045299)	ENSFCAG00000004670	MAP3K8 (ENSFCAG00000004397)	MTPAP (ENSFCAG00000019348)
Caniformia	ANCESTRAL SPECIES	30	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164184	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Canidae	ANCESTRAL SPECIES	67	ENSGT00390000003836	ENSGT00510000049635	ENSGT00390000008783.cb.b.a	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00910000148394.a	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00950000185069	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Canis_lupus	ANCESTRAL SPECIES	50	ENSGT00390000003836	ENSGT00510000049635	ENSGT00390000008783.cb.b.a	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00910000148394.a	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00950000185069	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836
Dingo	MODERN SPECIES	235	OTUD1 (ENSCAFG00020026117)	ENSCAFG00020026114	KIAA1217 (ENSCAFG00020025965)	ARHGAP21 (ENSCAFG00020025764)	PRTFDC1 (ENSCAFG00020025727)	ENKUR (ENSCAFG00020025719)	THNSL1 (ENSCAFG00020025717)	GPR158 (ENSCAFG00020025709)	ENSCAFG00020025703	MYO3A (ENSCAFG00020025694)	GAD2 (ENSCAFG00020025688)	ENSCAFG00020025686	APBB1IP (ENSCAFG00020025685)	ENSCAFG00020025684	ENSCAFG00020025681	PDSS1 (ENSCAFG00020025669) ##22	ENSCAFG00020025668	ABI1 (ENSCAFG00020025465)	ACBD5 (ENSCAFG00020025456)	MASTL (ENSCAFG00020025454)	YME1L1 (ENSCAFG00020025453)	ODAD2 (ENSCAFG00020025451)	ENSCAFG00020025450	MPP7 (ENSCAFG00020025446)	ENSCAFG00020025444	ENSCAFG00020025441	ENSCAFG00020025439
Dog	MODERN SPECIES	11	PTF1A (ENSCAFG00845006739)	C10orf67 (ENSCAFG00845006678)	OTUD1 (ENSCAFG00845006646)	ENSCAFG00845006450	KIAA1217 (ENSCAFG00845005972)	ARHGAP21 (ENSCAFG00845005616)	PRTFDC1 (ENSCAFG00845005485)	ENKUR (ENSCAFG00845005449)	THNSL1 (ENSCAFG00845005436)	GPR158 (ENSCAFG00845004137)	MYO3A (ENSCAFG00845003959)	GAD2 (ENSCAFG00845003895)	APBB1IP (ENSCAFG00845003856)	ENSCAFG00845003815	ENSCAFG00845003805	PDSS1 (ENSCAFG00845003791) ##22	ENSCAFG00845003784	ABI1 (ENSCAFG00845003709)	ENSCAFG00845003564	ENSCAFG00845003497	YME1L1 (ENSCAFG00845003426)	ENSCAFG00845003317	ENSCAFG00845003242	CCDC7 (ENSCAFG00845003160)	ENSCAFG00845003110	ITGB1 (ENSCAFG00845002947)	NRP1 (ENSCAFG00845002787)	ENSCAFG00845002703	PARD3 (ENSCAFG00845002370)	CUL2 (ENSCAFG00845002080)	CREM (ENSCAFG00845001664)
Red fox	MODERN SPECIES	100	ARMC3 (ENSVVUG00000010474)	MSRB2 (ENSVVUG00000010468)	C10orf67 (ENSVVUG00000010441)	ENSVVUG00000010430	KIAA1217 (ENSVVUG00000010397)	ARHGAP21 (ENSVVUG00000010332)	PRTFDC1 (ENSVVUG00000010312)	ENKUR (ENSVVUG00000010301)	THNSL1 (ENSVVUG00000010300)	GPR158 (ENSVVUG00000010258)	ENSVVUG00000010251	MYO3A (ENSVVUG00000010082)	GAD2 (ENSVVUG00000009106)	APBB1IP (ENSVVUG00000009088)	ENSVVUG00000009053	PDSS1 (ENSVVUG00000009012) ##22	ABI1 (ENSVVUG00000008990)	ENSVVUG00000008983	ACBD5 (ENSVVUG00000008972)	MASTL (ENSVVUG00000008970)	YME1L1 (ENSVVUG00000008963)
Caniformia_b	ANCESTRAL SPECIES	33	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836.k	ENSGT00940000158727	ENSGT00940000164184	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Mustelinae	ANCESTRAL SPECIES	83	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836.l.b.b
Ferret	MODERN SPECIES	220	MSRB2 (ENSMPUG00000012096)	ENSMPUG00000012111	C10orf67 (ENSMPUG00000012112)	ENSMPUG00000012120	KIAA1217 (ENSMPUG00000012123)	ARHGAP21 (ENSMPUG00000012130)	PRTFDC1 (ENSMPUG00000012136)	ENKUR (ENSMPUG00000012140)	THNSL1 (ENSMPUG00000019309)	GPR158 (ENSMPUG00000012149)	MYO3A (ENSMPUG00000012154)	GAD2 (ENSMPUG00000012171)	ENSMPUG00000012177	APBB1IP (ENSMPUG00000012179)	ENSMPUG00000012225	PDSS1 (ENSMPUG00000012232) ##22	ABI1 (ENSMPUG00000012263)	ACBD5 (ENSMPUG00000012266)	MASTL (ENSMPUG00000012269)	ENSMPUG00000012274	ENSMPUG00000012283
American mink	MODERN SPECIES	188											ENSNVIG00000023621	MYO3A (ENSNVIG00000023609)	DCE2 (ENSNVIG00000023595)	APBB1IP (ENSNVIG00000023585)	ENSNVIG00000023580	PDSS1 (ENSNVIG00000023576) ##22	ABI1 (ENSNVIG00000023522)	ACBD5 (ENSNVIG00000023504)	MASTL (ENSNVIG00000023490)	ENSNVIG00000023316	ENSNVIG00000023293	ENSNVIG00000023287	C2orf15 (ENSNVIG00000023285)	LIPT1 (ENSNVIG00000023284)	MITD1 (ENSNVIG00000023282)	RM30 (ENSNVIG00000023278)	LYG2 (ENSNVIG00000023271)	LYG1 (ENSNVIG00000023261)	EPCAM (ENSNVIG00000023254)	MSH2 (ENSNVIG00000022950)	KCNK12 (ENSNVIG00000022933)
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000153498.B.a.g ##22
Giant Panda	MODERN SPECIES	1514																ENSAMEG00000030758 ##22
Ursidae	ANCESTRAL SPECIES	46	ENSGT00950000185487	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a.h ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836.k
Ursus	ANCESTRAL SPECIES	261												ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a.h ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836.k
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	342									GPR158 (ENSUMAG00000001813)	ENSUMAG00000001802	MYO3A (ENSUMAG00000001650)	GAD2 (ENSUMAG00000001504)	ENSUMAG00000001490	APBB1IP (ENSUMAG00000001466)	ENSUMAG00000001437	ENSUMAG00000001414 ##22	ENSUMAG00000001406 ##22	ABI1 (ENSUMAG00000000981)	ACBD5 (ENSUMAG00000000936)	MASTL (ENSUMAG00000000892)	ENSUMAG00000000867
Polar bear	MODERN SPECIES	342								GPR158 (ENSUMAG00000001813)	ENSUMAG00000001802	MYO3A (ENSUMAG00000001650)	GAD2 (ENSUMAG00000001504)	ENSUMAG00000001490	APBB1IP (ENSUMAG00000001466)	ENSUMAG00000001437	ENSUMAG00000001414 ##22	ENSUMAG00000001406 ##22	ABI1 (ENSUMAG00000000981)	ACBD5 (ENSUMAG00000000936)	MASTL (ENSUMAG00000000892)	ENSUMAG00000000867
American black bear	MODERN SPECIES	1248																ENSUAMG00000009521 ##22	ENSUAMG00000009524	ABI1 (ENSUAMG00000009529)	ACBD5 (ENSUAMG00000009539)	MASTL (ENSUAMG00000009545)
Giant Panda	MODERN SPECIES	6	ENSAMEG00000026700	PIP4K2A (ENSAMEG00000006281)	ARMC3 (ENSAMEG00000006332)	MSRB2 (ENSAMEG00000025364)	PTF1A (ENSAMEG00000023671)	KIAA1217 (ENSAMEG00000006395)	ARHGAP21 (ENSAMEG00000006453)	PRTFDC1 (ENSAMEG00000006532)	ENKUR (ENSAMEG00000001288)	ENSAMEG00000030174	GPR158 (ENSAMEG00000017705)	MYO3A (ENSAMEG00000004928)	GAD2 (ENSAMEG00000004944)	APBB1IP (ENSAMEG00000001945)	ENSAMEG00000028669	PDSS1 (ENSAMEG00000001932) ##22	ENSAMEG00000001906	ENSAMEG00000001878	MASTL (ENSAMEG00000001855)	ENSAMEG00000001795	ENSAMEG00000029020	ENSAMEG00000016008	ENSAMEG00000015990	ENSAMEG00000008177	ENSAMEG00000008122	WAC (ENSAMEG00000008096)	BAMBI (ENSAMEG00000008094)	ENSAMEG00000017083	MAP3K8 (ENSAMEG00000017079)	MTPAP (ENSAMEG00000017072)	JCAD (ENSAMEG00000017066)
Laurasiatheria_c	ANCESTRAL SPECIES	27	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000167080	ENSGT00390000003836	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Equus	ANCESTRAL SPECIES	44	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000153661.a.a	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Horse	MODERN SPECIES	21	C29H10orf67 (ENSECAG00000012482)	OTUD1 (ENSECAG00000040284)	ENSECAG00000047964	KIAA1217 (ENSECAG00000000015)	ARHGAP21 (ENSECAG00000011309)	PRTFDC1 (ENSECAG00000009797)	ENKUR (ENSECAG00000008266)	THNSL1 (ENSECAG00000009339)	GPR158 (ENSECAG00000006062)	ENSECAG00000028007	ENSECAG00000019687	MYO3A (ENSECAG00000012060)	GAD2 (ENSECAG00000000006)	APBB1IP (ENSECAG00000022742)	ENSECAG00000032560	PDSS1 (ENSECAG00000022169) ##22	ABI1 (ENSECAG00000015467)	ACBD5 (ENSECAG00000013408)	MASTL (ENSECAG00000012629)	YME1L1 (ENSECAG00000000140)	PTCHD3 (ENSECAG00000000063)	RAB18 (ENSECAG00000017521)	MKX (ENSECAG00000016778)	ODAD2 (ENSECAG00000015255)	MPP7 (ENSECAG00000012282)	WAC (ENSECAG00000005374)	BAMBI (ENSECAG00000003193)	ENSECAG00000000289	MAP3K8 (ENSECAG00000000090)	MTPAP (ENSECAG00000000001)	JCAD (ENSECAG00000024077)
Donkey	MODERN SPECIES	21	MSRB2 (ENSEASG00005033779)	PTF1A (ENSEASG00005006936)	ENSEASG00005038460	KIAA1217 (ENSEASG00005006898)	ARHGAP21 (ENSEASG00005006877)	PRTFDC1 (ENSEASG00005006868)	ENKUR (ENSEASG00005006865)	THNSL1 (ENSEASG00005006864)	ENSEASG00005006862	ENSEASG00005006859	ENSEASG00005006846	ENSEASG00005006844	GAD2 (ENSEASG00005006835)	APBB1IP (ENSEASG00005006831)	ENSEASG00005006824	PDSS1 (ENSEASG00005006820) ##22	ENSEASG00005006816	ENSEASG00005006814	ENSEASG00005006812	ENSEASG00005006732	ENSEASG00005006711	RAB18 (ENSEASG00005031580)	MKX (ENSEASG00005007193)	ODAD2 (ENSEASG00005007199)	ENSEASG00005007200	ENSEASG00005019956	GPR137 (ENSEASG00005019952)	KCNK4 (ENSEASG00005019945)	CATSPERZ (ENSEASG00005019942)	ESRRA (ENSEASG00005019938)	PRDX5 (ENSEASG00005031543)
Chiroptera	ANCESTRAL SPECIES	55	ENSGT00940000161673	ENSGT00940000161000	ENSGT00940000167080	ENSGT00390000003836	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a
Microchiroptera	ANCESTRAL SPECIES	50	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00390000001795	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a
Greater horseshoe bat	MODERN SPECIES	30	PTF1A (ENSRFEG00010009952)	OTUD1 (ENSRFEG00010010260)	KIAA1217 (ENSRFEG00010010439)	ENSRFEG00010011032	ENSRFEG00010011089	ARHGAP21 (ENSRFEG00010011157)	PRTFDC1 (ENSRFEG00010011247)	ENKUR (ENSRFEG00010011340)	THNSL1 (ENSRFEG00010011393)	ENSRFEG00010011414	GPR158 (ENSRFEG00010011440)	MYO3A (ENSRFEG00010011683)	GAD2 (ENSRFEG00010012347)	APBB1IP (ENSRFEG00010012424)	ENSRFEG00010012518	PDSS1 (ENSRFEG00010012655) ##22	ABI1 (ENSRFEG00010012869)	ACBD5 (ENSRFEG00010013312)	MASTL (ENSRFEG00010013997)	YME1L1 (ENSRFEG00010014574)	ENSRFEG00010014711	ENSRFEG00010014792	ENSRFEG00010014813	UCN3 (ENSRFEG00010014868)	TUBAL3 (ENSRFEG00010014890)	NET1 (ENSRFEG00010015001)	CALML5 (ENSRFEG00010015113)	CALML3 (ENSRFEG00010015140)	ASB13 (ENSRFEG00010015183)	TASOR2 (ENSRFEG00010015283)	GDI2 (ENSRFEG00010015421)
Microbat	MODERN SPECIES	1243												MYO3A (ENSMLUG00000008053)	GAD2 (ENSMLUG00000008148)	APBB1IP (ENSMLUG00000011999)	ENSMLUG00000026382	PDSS1 (ENSMLUG00000008851) ##22	ENSMLUG00000008872	ACBD5 (ENSMLUG00000012152)	MASTL (ENSMLUG00000012139)	YME1L1 (ENSMLUG00000012129)	TACR3 (ENSMLUG00000015733)
Megabat	MODERN SPECIES	3097															APBB1IP (ENSPVAG00000013170)	PDSS1 (ENSPVAG00000013172) ##22	ABI1 (ENSPVAG00000013174)
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Xenarthra	ANCESTRAL SPECIES	308												ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f
Armadillo	MODERN SPECIES	2776											GPR158 (ENSDNOG00000047619)	MYO3A (ENSDNOG00000006012)	GAD2 (ENSDNOG00000043507)	ENSDNOG00000034859	APBB1IP (ENSDNOG00000001334)	PDSS1 (ENSDNOG00000018046) ##22	ABI1 (ENSDNOG00000001565)	ACBD5 (ENSDNOG00000015409)	MASTL (ENSDNOG00000002589)	YME1L1 (ENSDNOG00000010050)	ANKRD26 (ENSDNOG00000046801)	PTCHD3 (ENSDNOG00000034811)	RAB18 (ENSDNOG00000047713)	MKX (ENSDNOG00000001593)
Sloth	MODERN SPECIES	3949																PDSS1 (ENSCHOG00000007475) ##22
Afrotheria	ANCESTRAL SPECIES	11	ENSGT00940000156042	ENSGT00900000141099	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Afrotheria_a	ANCESTRAL SPECIES	11	ENSGT00940000156042	ENSGT00900000141099	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000162459	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582
Elephant	MODERN SPECIES	108	PIP4K2A (ENSLAFG00000000858)	ARMC3 (ENSLAFG00000007577)	MSRB2 (ENSLAFG00000013558)	PTF1A (ENSLAFG00000012682)	ENSLAFG00000009109	OTUD1 (ENSLAFG00000029419)	KIAA1217 (ENSLAFG00000017654)	ARHGAP21 (ENSLAFG00000017666)	ENKUR (ENSLAFG00000015408)	THNSL1 (ENSLAFG00000015412)	MYO3A (ENSLAFG00000009248)	GAD2 (ENSLAFG00000009255)	ENSLAFG00000030960	ENSLAFG00000016457	ENSLAFG00000028353	PDSS1 (ENSLAFG00000017974) ##22	ABI1 (ENSLAFG00000017979)	ACBD5 (ENSLAFG00000002908)	MASTL (ENSLAFG00000030503)	YME1L1 (ENSLAFG00000021743)	ANKRD26 (ENSLAFG00000011946)	PTCHD3 (ENSLAFG00000029781)	RAB18 (ENSLAFG00000015582)	ENSLAFG00000025535	MKX (ENSLAFG00000006126)	ODAD2 (ENSLAFG00000016023)	MPP7 (ENSLAFG00000010589)	WAC (ENSLAFG00000006631)	BAMBI (ENSLAFG00000029472)	ENSLAFG00000014906	MAP3K8 (ENSLAFG00000013461)
Hyrax	MODERN SPECIES	3619																PDSS1 (ENSPCAG00000010894) ##22	ENSPCAG00000010995
Tenrec	MODERN SPECIES	4326																PDSS1 (ENSETEG00000017360) ##22	ABI1 (ENSETEG00000017364)
Sauria	ANCESTRAL SPECIES	15	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325.ab	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Archosauria	ANCESTRAL SPECIES		ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Aves	ANCESTRAL SPECIES	5	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184.j	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227
Neognathae	ANCESTRAL SPECIES		ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184.j	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227
Neognathae_b	ANCESTRAL SPECIES	9	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Great tit	MODERN SPECIES	11	ARMC3 (ENSPMJG00000006350)	ENSPMJG00000006339	ENSPMJG00000006336	PTF1A (ENSPMJG00000006333)	KIAA1217 (ENSPMJG00000006299)	ARHGAP21 (ENSPMJG00000006247)	PRTFDC1 (ENSPMJG00000006243)	ENKUR (ENSPMJG00000006240)	GPR158 (ENSPMJG00000006235)	ENSPMJG00000006210	ENSPMJG00000006207	ENSPMJG00000006200	GAD2 (ENSPMJG00000006196)	APBB1IP (ENSPMJG00000006178)	ENSPMJG00000006177	PDSS1 (ENSPMJG00000006176) ##22	ABI1 (ENSPMJG00000006173)	ACBD5 (ENSPMJG00000006169)	MASTL (ENSPMJG00000006160)	YME1L1 (ENSPMJG00000006156)	PTCHD3 (ENSPMJG00000006153)	ENSPMJG00000006151	RAB18 (ENSPMJG00000006149)	MKX (ENSPMJG00000006148)	ODAD2 (ENSPMJG00000006117)	MPP7 (ENSPMJG00000006103)	ENSPMJG00000006011	WAC (ENSPMJG00000006002)	BAMBI (ENSPMJG00000005997)	MAP3K8 (ENSPMJG00000005969)	MTPAP (ENSPMJG00000005965)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00900000143744	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951.c	ENSGT00940000157951.d	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Passeriformes_g	ANCESTRAL SPECIES	6	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951.d	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Passeroidea	ANCESTRAL SPECIES	6	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951.d	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Common canary	MODERN SPECIES	5	SPAG6 (ENSSCAG00000010084)	PIP4K2A (ENSSCAG00000010076)	ARMC3 (ENSSCAG00000010054)	ENSSCAG00000010037	PTF1A (ENSSCAG00000010034)	KIAA1217 (ENSSCAG00000009958)	ARHGAP21 (ENSSCAG00000009927)	PRTFDC1 (ENSSCAG00000009917)	ENKUR (ENSSCAG00000009912)	GPR158 (ENSSCAG00000009867)	ENSSCAG00000009855	ENSSCAG00000009851	GAD2 (ENSSCAG00000009663)	APBB1IP (ENSSCAG00000009623)	ENSSCAG00000009617	PDSS1 (ENSSCAG00000009611) ##22	ABI1 (ENSSCAG00000009593)	ACBD5 (ENSSCAG00000009560)	MASTL (ENSSCAG00000009550)	YME1L1 (ENSSCAG00000009065)	PTCHD3 (ENSSCAG00000008993)	RAB18 (ENSSCAG00000008984)	MKX (ENSSCAG00000008967)	ODAD2 (ENSSCAG00000008955)	MPP7 (ENSSCAG00000008935)	ENSSCAG00000008921	WAC (ENSSCAG00000008917)	BAMBI (ENSSCAG00000008914)	MAP3K8 (ENSSCAG00000008907)	MTPAP (ENSSCAG00000008898)	JCAD (ENSSCAG00000008886)
Zebra finch	MODERN SPECIES	12	PIP4K2A (ENSTGUG00000001191)	ARMC3 (ENSTGUG00000001182)	ENSTGUG00000001181	PTF1A (ENSTGUG00000001180)	OTUD1 (ENSTGUG00000001179)	KIAA1217 (ENSTGUG00000001172)	ARHGAP21 (ENSTGUG00000001167)	PRTFDC1 (ENSTGUG00000001166)	ENKUR (ENSTGUG00000001164)	THNSL1 (ENSTGUG00000001163)	GPR158 (ENSTGUG00000001161)	MYO3A (ENSTGUG00000001156)	GAD2 (ENSTGUG00000001148)	APBB1IP (ENSTGUG00000001140)	ENSTGUG00000001139	PDSS1 (ENSTGUG00000001136) ##22	ABI1 (ENSTGUG00000001133)	ACBD5 (ENSTGUG00000001127)	MASTL (ENSTGUG00000001123)	YME1L1 (ENSTGUG00000001114)	PTCHD3 (ENSTGUG00000001113)	ENSTGUG00000001111	RAB18 (ENSTGUG00000024739)	MKX (ENSTGUG00000001094)	ODAD2 (ENSTGUG00000001101)	MPP7 (ENSTGUG00000001078)	ENSTGUG00000026624	WAC (ENSTGUG00000001068)	BAMBI (ENSTGUG00000001062)	MAP3K8 (ENSTGUG00000001055)	MTPAP (ENSTGUG00000001048)
Medium ground finch	MODERN SPECIES	63						KIAA1217 (ENSGFOG00000014190)	ARHGAP21 (ENSGFOG00000014201)	PRTFDC1 (ENSGFOG00000014221)	ENKUR (ENSGFOG00000014224)	THNSL1 (ENSGFOG00000014226)	GPR158 (ENSGFOG00000014228)	MYO3A (ENSGFOG00000014240)	GAD2 (ENSGFOG00000014264)	APBB1IP (ENSGFOG00000014354)	ENSGFOG00000014357	PDSS1 (ENSGFOG00000014361) ##22	ABI1 (ENSGFOG00000014367)	ACBD5 (ENSGFOG00000014375)	MASTL (ENSGFOG00000014380)	YME1L1 (ENSGFOG00000014388)	ENSGFOG00000014451	ENSGFOG00000014452	RAB18 (ENSGFOG00000014453)	MKX (ENSGFOG00000014454)	ODAD2 (ENSGFOG00000014457)	MPP7 (ENSGFOG00000014461)	ENSGFOG00000014465	WAC (ENSGFOG00000014467)	BAMBI (ENSGFOG00000014468)	MAP3K8 (ENSGFOG00000014470)	MTPAP (ENSGFOG00000014474)
Flycatcher	MODERN SPECIES	11	ENSFALG00000027618	PTF1A (ENSFALG00000007280)	OTUD1 (ENSFALG00000007278)	KIAA1217 (ENSFALG00000007273)	ENSFALG00000026971	ARHGAP21 (ENSFALG00000007269)	PRTFDC1 (ENSFALG00000007259)	ENKUR (ENSFALG00000022860)	THNSL1 (ENSFALG00000014764)	GPR158 (ENSFALG00000007251)	MYO3A (ENSFALG00000007225)	ENSFALG00000027033	ENSFALG00000007214	APBB1IP (ENSFALG00000007208)	ENSFALG00000007204	PDSS1 (ENSFALG00000007201) ##22	ABI1 (ENSFALG00000007197)	ACBD5 (ENSFALG00000007190)	ENSFALG00000007183	YME1L1 (ENSFALG00000007172)	PTCHD3 (ENSFALG00000007166)	RAB18 (ENSFALG00000026033)	MKX (ENSFALG00000007156)	ODAD2 (ENSFALG00000007152)	MPP7 (ENSFALG00000007147)	ENSFALG00000027856	WAC (ENSFALG00000007145)	BAMBI (ENSFALG00000007141)	MAP3K8 (ENSFALG00000007135)	MTPAP (ENSFALG00000007132)	JCAD (ENSFALG00000007127)
Neognathae_c	ANCESTRAL SPECIES	12	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806
Kakapo	MODERN SPECIES		PIP4K2A (ENSSHBG00005002259)	ARMC3 (ENSSHBG00005002195)	ENSSHBG00005002162	PTF1A (ENSSHBG00005002151)	OTUD1 (ENSSHBG00005002132)	KIAA1217 (ENSSHBG00005001948)	ARHGAP21 (ENSSHBG00005001756)	PRTFDC1 (ENSSHBG00005001721)	ENKUR (ENSSHBG00005001688)	THNSL1 (ENSSHBG00005001664)	ENSSHBG00005001626	ENSSHBG00005001613	MYO3A (ENSSHBG00005001545)	GAD2 (ENSSHBG00005001413)	APBB1IP (ENSSHBG00005001392)	PDSS1 (ENSSHBG00005001353) ##22	ABI1 (ENSSHBG00005001316)	ACBD5 (ENSSHBG00005001285)	MASTL (ENSSHBG00005001277)	YME1L1 (ENSSHBG00005000436)	PTCHD3 (ENSSHBG00005000435)	ENSSHBG00005000431	RAB18 (ENSSHBG00005019840)	MKX (ENSSHBG00005019839)	ODAD2 (ENSSHBG00005019838)	MPP7 (ENSSHBG00005019837)	ENSSHBG00005019835	WAC (ENSSHBG00005019834)	BAMBI (ENSSHBG00005019833)	MAP3K8 (ENSSHBG00005019830)	MTPAP (ENSSHBG00005019826)
Golden eagle	MODERN SPECIES	19	ARMC3 (ENSACCG00020006954)	ENSACCG00020006967	PTF1A (ENSACCG00020006979)	OTUD1 (ENSACCG00020006986)	KIAA1217 (ENSACCG00020007020)	ARHGAP21 (ENSACCG00020007086)	PRTFDC1 (ENSACCG00020007133)	ENKUR (ENSACCG00020007147)	THNSL1 (ENSACCG00020007168)	GPR158 (ENSACCG00020007182)	ENSACCG00020007197	MYO3A (ENSACCG00020007209)	GAD2 (ENSACCG00020000297)	APBB1IP (ENSACCG00020000306)	ENSACCG00020000340	PDSS1 (ENSACCG00020000369) ##22	ABI1 (ENSACCG00020000499)	ACBD5 (ENSACCG00020000559)	MASTL (ENSACCG00020000597)	YME1L1 (ENSACCG00020000640)	PTCHD3 (ENSACCG00020000672)	ENSACCG00020000694	ENSACCG00020000712	RAB18 (ENSACCG00020000738)	MKX (ENSACCG00020000791)	ODAD2 (ENSACCG00020000822)	MPP7 (ENSACCG00020000872)	ENSACCG00020000899	ENSACCG00020000912	WAC (ENSACCG00020000927)	BAMBI (ENSACCG00020000946)
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184.j	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.u.a	ENSGT00940000154811.B	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060.c	ENSGT00940000164184.j	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a
Japanese quail	MODERN SPECIES	11	PIP4K2A (ENSCJPG00005004036)	ARMC3 (ENSCJPG00005004019)	PTF1A (ENSCJPG00005004016)	ENSCJPG00005004013	OTUD1 (ENSCJPG00005004011)	KIAA1217 (ENSCJPG00005003979)	ARHGAP21 (ENSCJPG00005003963)	PRTFDC1 (ENSCJPG00005003949)	ENKUR (ENSCJPG00005003948)	THNSL1 (ENSCJPG00005003947)	GPR158 (ENSCJPG00005003946)	MYO3A (ENSCJPG00005003940)	GAD2 (ENSCJPG00005003939)	APBB1IP (ENSCJPG00005003927)	ENSCJPG00005003926	PDSS1 (ENSCJPG00005003925) ##22	ABI1 (ENSCJPG00005003924)	ACBD5 (ENSCJPG00005003923)	MASTL (ENSCJPG00005003921)	YME1L1 (ENSCJPG00005003918)	ENSCJPG00005003890	ENSCJPG00005003886	ENSCJPG00005003885	ENSCJPG00005003882	RAB18 (ENSCJPG00005003880)	MKX (ENSCJPG00005003877)	ODAD2 (ENSCJPG00005003873)	MPP7 (ENSCJPG00005003790)	ENSCJPG00005003788	WAC (ENSCJPG00005003784)	BAMBI (ENSCJPG00005003754)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00900000141099	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.u.a	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060.c	ENSGT00940000164184.j	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806
Turkey	DUPLICATION
Turkey	MODERN SPECIES	26	ENSMGAG00000006563	ENSMGAG00000006573	ENSMGAG00000006606	ENSMGAG00000006609	ENSMGAG00000006643	ENSMGAG00000006668	ENSMGAG00000006673	ENSMGAG00000022744	ENSMGAG00000021839	ENSMGAG00000018816	ENSMGAG00000006697	ENSMGAG00000006734	ENSMGAG00000006754	ENSMGAG00000020351	ENSMGAG00000006774	ENSMGAG00000017657 ##22	ENSMGAG00000022786	ENSMGAG00000006830 ##22	ENSMGAG00000020132	ENSMGAG00000006849	ENSMGAG00000018940	ENSMGAG00000006891	ENSMGAG00000006952	ENSMGAG00000020760	ENSMGAG00000018476	ENSMGAG00000007021	ENSMGAG00000016013	ENSMGAG00000007062	PRTFDC1 (ENSMGAG00000007067)	ENSMGAG00000007174	ENSMGAG00000007092
Turkey	MODERN SPECIES	26	ENSMGAG00000006606	ENSMGAG00000006609	ENSMGAG00000006643	ENSMGAG00000006668	ENSMGAG00000006673	ENSMGAG00000022744	ENSMGAG00000021839	ENSMGAG00000018816	ENSMGAG00000006697	ENSMGAG00000006734	ENSMGAG00000006754	ENSMGAG00000020351	ENSMGAG00000006774	ENSMGAG00000017657 ##22	ENSMGAG00000022786	ENSMGAG00000006830 ##22	ENSMGAG00000020132	ENSMGAG00000006849	ENSMGAG00000018940	ENSMGAG00000006891	ENSMGAG00000006952	ENSMGAG00000020760	ENSMGAG00000018476	ENSMGAG00000007021	ENSMGAG00000016013	ENSMGAG00000007062	PRTFDC1 (ENSMGAG00000007067)	ENSMGAG00000007174	ENSMGAG00000007092	ADARB2 (ENSMGAG00000005556)	WDR37 (ENSMGAG00000005536)
Chicken	MODERN SPECIES	11	SPAG6 (ENSGALG00010004222)	PIP4K2A (ENSGALG00010004265)	ARMC3 (ENSGALG00010004231)	PTF1A (ENSGALG00010004229)	OTUD1 (ENSGALG00010004707)	KIAA1217 (ENSGALG00010005245)	ARHGAP21 (ENSGALG00010005159)	PRTFDC1 (ENSGALG00010005118)	ENKUR (ENSGALG00010005065)	THNSL1 (ENSGALG00010005037)	GPR158 (ENSGALG00010004996)	MYO3A (ENSGALG00010005447)	GAD2 (ENSGALG00010005413)	APBB1IP (ENSGALG00010005408)	ENSGALG00010005392	PDSS1 (ENSGALG00010005385) ##22	ABI1 (ENSGALG00010005353)	ENSGALG00010006651	ACBD5 (ENSGALG00010005349)	MASTL (ENSGALG00010005326)	YME1L1 (ENSGALG00010005311)	ENSGALG00010005304	ENSGALG00010005301	ENSGALG00010005295	RAB18 (ENSGALG00010004673)	MKX (ENSGALG00010005497)	ODAD2 (ENSGALG00010005299)	MPP7 (ENSGALG00010005285)	SSNA1 (ENSGALG00010005208)	WAC (ENSGALG00010005180)	BAMBI (ENSGALG00010005176)
Anatidae	ANCESTRAL SPECIES	1	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184.j	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Pink-footed goose	MODERN SPECIES	30	ARMC3 (ENSABRG00000003474)	ENSABRG00000003435	PTF1A (ENSABRG00000003424)	OTUD1 (ENSABRG00000003412)	KIAA1217 (ENSABRG00000003179)	ARHGAP21 (ENSABRG00000002966)	PRTFDC1 (ENSABRG00000002915)	ENKUR (ENSABRG00000002896)	THNSL1 (ENSABRG00000002890)	GPR158 (ENSABRG00000002847)	ENSABRG00000002812	MYO3A (ENSABRG00000002738)	GAD2 (ENSABRG00000002721)	APBB1IP (ENSABRG00000002650)	ENSABRG00000002591	PDSS1 (ENSABRG00000002561) ##22	ABI1 (ENSABRG00000002544)	ACBD5 (ENSABRG00000002497)	MASTL (ENSABRG00000002394)	YME1L1 (ENSABRG00000002314)	PTCHD3 (ENSABRG00000002304)	ENSABRG00000002281	ENSABRG00000002254	MKX (ENSABRG00000002222)	ODAD2 (ENSABRG00000002137)	MPP7 (ENSABRG00000001975)	ENSABRG00000001930	WAC (ENSABRG00000001904)	BAMBI (ENSABRG00000001894)	MAP3K8 (ENSABRG00000001831)	MTPAP (ENSABRG00000001804)
Duck	MODERN SPECIES	10	ARMC3 (ENSAPLG00000005071)	PTF1A (ENSAPLG00000022813)	ENSAPLG00000022206	OTUD1 (ENSAPLG00000026401)	KIAA1217 (ENSAPLG00000007810)	ARHGAP21 (ENSAPLG00000008113)	PRTFDC1 (ENSAPLG00000009020)	ENKUR (ENSAPLG00000009270)	THNSL1 (ENSAPLG00000001860)	GPR158 (ENSAPLG00000005836)	ENSAPLG00000030844	MYO3A (ENSAPLG00000005895)	GAD2 (ENSAPLG00000007020)	APBB1IP (ENSAPLG00000011179)	ENSAPLG00000023737	PDSS1 (ENSAPLG00000011581) ##22	ABI1 (ENSAPLG00000011841)	ENSAPLG00000022501	ACBD5 (ENSAPLG00000012250)	MASTL (ENSAPLG00000012632)	YME1L1 (ENSAPLG00000012942)	PTCHD3 (ENSAPLG00000013648)	ENSAPLG00000029634	MKX (ENSAPLG00000010674)	ODAD2 (ENSAPLG00000010322)	MPP7 (ENSAPLG00000009795)	ENSAPLG00000022680	WAC (ENSAPLG00000009527)	BAMBI (ENSAPLG00000009484)	MAP3K8 (ENSAPLG00000009205)	MTPAP (ENSAPLG00000008962)
African ostrich	MODERN SPECIES	770												MYO3A (ENSSCUG00000014629)	GAD2 (ENSSCUG00000014655)	APBB1IP (ENSSCUG00000014688)	ENSSCUG00000014690	PDSS1 (ENSSCUG00000014701) ##22	ABI1 (ENSSCUG00000014709)	ACBD5 (ENSSCUG00000014714)	MASTL (ENSSCUG00000014717)	YME1L1 (ENSSCUG00000014748)	PTCHD3 (ENSSCUG00000014782)	ENSSCUG00000014784	ENSSCUG00000014789	MKX (ENSSCUG00000014797)	ODAD2 (ENSSCUG00000014809)	MPP7 (ENSSCUG00000014819)	SSNA1 (ENSSCUG00000014828)	WAC (ENSSCUG00000014832)	BAMBI (ENSSCUG00000014839)	ENSSCUG00000014843	MAP3K8 (ENSSCUG00000014851)
Australian saltwater crocodile	MODERN SPECIES		PTF1A (ENSCPRG00005008901)	ENSCPRG00005008880	ENSCPRG00005008817	KIAA1217 (ENSCPRG00005008763)	ENSCPRG00005008744	ARHGAP21 (ENSCPRG00005008715)	PRTFDC1 (ENSCPRG00005008690)	ENKUR (ENSCPRG00005008672)	THNSL1 (ENSCPRG00005008670)	GPR158 (ENSCPRG00005008646)	ENSCPRG00005008606	ENSCPRG00005008581	GAD2 (ENSCPRG00005008567)	APBB1IP (ENSCPRG00005008515)	ENSCPRG00005008507	PDSS1 (ENSCPRG00005008457) ##22	ABI1 (ENSCPRG00005008449)	ACBD5 (ENSCPRG00005008437)	MASTL (ENSCPRG00005008424)	YME1L1 (ENSCPRG00005008404)	ENSCPRG00005008342	ENSCPRG00005008335	MKX (ENSCPRG00005008242)	ODAD2 (ENSCPRG00005008226)	MPP7 (ENSCPRG00005008160)	ENSCPRG00005008116	ENSCPRG00005008115	WAC (ENSCPRG00005008077)	BAMBI (ENSCPRG00005008013)	ENSCPRG00005007920	MAP3K8 (ENSCPRG00005007912)
Cryptodira	ANCESTRAL SPECIES	4	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184.j	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000161810.b	ENSGT00940000158806
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164060	ENSGT00940000164184.j	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000161810.b	ENSGT00940000158806
Emydidae	ANCESTRAL SPECIES	35	ENSGT00940000157476	ENSGT00940000161673	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000164184.j	ENSGT00940000157325.ab	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000161810.b	ENSGT00940000158806
Three-toed box turtle	MODERN SPECIES	30	PIP4K2A (ENSTMTG00000005077)	ARMC3 (ENSTMTG00000005107)	ENSTMTG00000005171	PTF1A (ENSTMTG00000005190)	OTUD1 (ENSTMTG00000005200)	KIAA1217 (ENSTMTG00000005290)	ARHGAP21 (ENSTMTG00000006138)	PRTFDC1 (ENSTMTG00000006210)	ENKUR (ENSTMTG00000006242)	THNSL1 (ENSTMTG00000006281)	GPR158 (ENSTMTG00000006304)	ENSTMTG00000006390	ENSTMTG00000006428	GAD2 (ENSTMTG00000006449)	APBB1IP (ENSTMTG00000006591)	PDSS1 (ENSTMTG00000006618) ##22	ABI1 (ENSTMTG00000006655)	ACBD5 (ENSTMTG00000006699)	MASTL (ENSTMTG00000006731)	YME1L1 (ENSTMTG00000006751)
painted turtle	MODERN SPECIES	2396	KIAA1217 (ENSCPBG00000015300)	ARHGAP21 (ENSCPBG00000015343)	PRTFDC1 (ENSCPBG00000015368)	ENKUR (ENSCPBG00000015370)	THNSL1 (ENSCPBG00000015372)	GPR158 (ENSCPBG00000015376)	MYO3A (ENSCPBG00000015398)	ENSCPBG00000015421	FMO4 (ENSCPBG00000015809)	PRRC2C (ENSCPBG00000015812)	ENSCPBG00000015823	MYOC (ENSCPBG00000015824)	VAMP4 (ENSCPBG00000015825)	APBB1IP (ENSCPBG00000015827)	ENSCPBG00000015828	PDSS1 (ENSCPBG00000015829) ##22	ABI1 (ENSCPBG00000015830)	ACBD5 (ENSCPBG00000015832)	MASTL (ENSCPBG00000015834)	YME1L1 (ENSCPBG00000015835)	ENSCPBG00000015836	ENSCPBG00000015837	ENSCPBG00000015839	MKX (ENSCPBG00000015841)	ODAD2 (ENSCPBG00000015843)	MPP7 (ENSCPBG00000015848)	ENSCPBG00000015858	WAC (ENSCPBG00000015860)	BAMBI (ENSCPBG00000015863)	ENSCPBG00000015866	MAP3K8 (ENSCPBG00000015870)
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000164184.j	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000161810.b	ENSGT00940000158806
Abingdon island giant tortoise	MODERN SPECIES	1151												ENSCABG00000013132	ENSCABG00000013128	GAD2 (ENSCABG00000013125)	APBB1IP (ENSCABG00000013118)	PDSS1 (ENSCABG00000013115) ##22	ABI1 (ENSCABG00000013111)	ACBD5 (ENSCABG00000013110)	MASTL (ENSCABG00000013102)	YME1L1 (ENSCABG00000013084)	ENSCABG00000013081	ENSCABG00000013079	ENSCABG00000013077	ENSCABG00000013062
Chinese turtle	MODERN SPECIES	481					ENSPSIG00000000445	KIAA1217 (ENSPSIG00000010775)	ARHGAP21 (ENSPSIG00000010401)	ENKUR (ENSPSIG00000009443)	THNSL1 (ENSPSIG00000000440)	GPR158 (ENSPSIG00000009110)	MYO3A (ENSPSIG00000008703)	GAD2 (ENSPSIG00000017384)	ENSPSIG00000017368	APBB1IP (ENSPSIG00000017260)	ENSPSIG00000016643	PDSS1 (ENSPSIG00000015746) ##22	ABI1 (ENSPSIG00000014044)	ACBD5 (ENSPSIG00000011333)	MASTL (ENSPSIG00000011051)	YME1L1 (ENSPSIG00000009854)	ENSPSIG00000009588
Lepidosauria	ANCESTRAL SPECIES	5	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000.j	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060	ENSGT00940000158727	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
tuatara	MODERN SPECIES	45										GPR158 (ENSSPUG00000015470)	ENSSPUG00000015455	ENSSPUG00000015445	APBB1IP (ENSSPUG00000015435)	ENSSPUG00000015427	ENSSPUG00000015418	PDSS1 (ENSSPUG00000015388) ##22	ABI1 (ENSSPUG00000015366)
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000.j	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A.a	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060.i	ENSGT00940000158727.y.a.a	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Laterata	ANCESTRAL SPECIES	10	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000.j	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A.a	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000164060.i	ENSGT00940000158727.y.a.a	ENSGT00940000158727.y.a.b.a	ENSGT00940000158727.y.b	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318	ENSGT00440000037780.a	ENSGT00940000154101.b
Common wall lizard	MODERN SPECIES	3	ARMC3 (ENSPMRG00000014076)	ENSPMRG00000014070	PTF1A (ENSPMRG00000014063)	OTUD1 (ENSPMRG00000014057)	ENSPMRG00000014045	KIAA1217 (ENSPMRG00000013949)	ARHGAP21 (ENSPMRG00000013868)	ENSPMRG00000013830	THNSL1 (ENSPMRG00000013824)	GPR158 (ENSPMRG00000013740)	MYO3A (ENSPMRG00000013554)	GAD2 (ENSPMRG00000013217)	ENSPMRG00000013153	ENSPMRG00000013149	ENSPMRG00000013131	PDSS1 (ENSPMRG00000013098) ##22	ABI1 (ENSPMRG00000013082)	ENSPMRG00000013075	ACBD5 (ENSPMRG00000013061)	MASTL (ENSPMRG00000013045)	YME1L1 (ENSPMRG00000012758)	ENSPMRG00000012690	ENSPMRG00000012688	ENSPMRG00000012666	ENSPMRG00000012658	ENSPMRG00000012654	ENSPMRG00000012648	ENSPMRG00000012643	ENSPMRG00000012639	ENSPMRG00000012635	ENSPMRG00000012626
Argentine black and white tegu	MODERN SPECIES	5	ARMC3 (ENSSMRG00000014072)	ENSSMRG00000014077	PTF1A (ENSSMRG00000014078)	OTUD1 (ENSSMRG00000014079)	KIAA1217 (ENSSMRG00000014080)	ARHGAP21 (ENSSMRG00000014082)	ENSSMRG00000014083	PRTFDC1 (ENSSMRG00000014084)	ENSSMRG00000014085	THNSL1 (ENSSMRG00000014086)	GPR158 (ENSSMRG00000014090)	MYO3A (ENSSMRG00000014096)	GAD2 (ENSSMRG00000014217)	APBB1IP (ENSSMRG00000014220)	ENSSMRG00000014221	PDSS1 (ENSSMRG00000014223) ##22	ABI1 (ENSSMRG00000014224)	ACBD5 (ENSSMRG00000014225)	MASTL (ENSSMRG00000014226)	YME1L1 (ENSSMRG00000014227)	ENSSMRG00000014228	ENSSMRG00000014229	ENSSMRG00000014230	ENSSMRG00000014231	ENSSMRG00000014232	ENSSMRG00000014233	MKX (ENSSMRG00000014234)	ODAD2 (ENSSMRG00000014235)	MPP7 (ENSSMRG00000014236)	ENSSMRG00000014237	WAC (ENSSMRG00000014238)
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00940000156508	ENSGT00940000157476	ENSGT00940000155240.B	ENSGT00940000161000.j	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A.a	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727.y.a.a	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Lizard	MODERN SPECIES	5	ENSACAG00000028584	PTF1A (ENSACAG00000008717)	ENSACAG00000036611	OTUD1 (ENSACAG00000028448)	KIAA1217 (ENSACAG00000008655)	ENSACAG00000044314	ARHGAP21 (ENSACAG00000008596)	PRTFDC1 (ENSACAG00000008581)	ENSACAG00000008543	THNSL1 (ENSACAG00000008536)	ENSACAG00000038901	GPR158 (ENSACAG00000008498)	MYO3A (ENSACAG00000008363)	GAD2 (ENSACAG00000008193)	APBB1IP (ENSACAG00000008163)	PDSS1 (ENSACAG00000008138) ##22	ENSACAG00000043200	ABI1 (ENSACAG00000008110)	ACBD5 (ENSACAG00000008079)	ENSACAG00000008039	ENSACAG00000007861	ENSACAG00000037361	ENSACAG00000040283	ENSACAG00000007851	ENSACAG00000043296	ENSACAG00000043629	MKX (ENSACAG00000007829)	ODAD2 (ENSACAG00000007785)	MPP7 (ENSACAG00000007649)	ENSACAG00000007648	ENSACAG00000036651
Elapidae	ANCESTRAL SPECIES	24							ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A.a	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727.y.a.a	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00390000012318	ENSGT00440000037780.a.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Elapidae_a	ANCESTRAL SPECIES	80							ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A.a	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727.y.a.a	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b.h	ENSGT00940000156232.b.g	ENSGT00390000012318	ENSGT00440000037780.a.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Acanthophiinae	ANCESTRAL SPECIES	76							ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A.a	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.v	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727.y.a.a	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b.h	ENSGT00390000012318	ENSGT00440000037780.a.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348
Eastern brown snake	MODERN SPECIES	45							ARHGAP21 (ENSPTXG00000006997)	PRTFDC1 (ENSPTXG00000007152)	ENSPTXG00000007153	THNSL1 (ENSPTXG00000007154)	GPR158 (ENSPTXG00000007155)	MYO3A (ENSPTXG00000007158)	GAD2 (ENSPTXG00000007170)	APBB1IP (ENSPTXG00000007171)	ENSPTXG00000007172	PDSS1 (ENSPTXG00000007173) ##22	ABI1 (ENSPTXG00000007174)	ACBD5 (ENSPTXG00000007175)	MASTL (ENSPTXG00000007176)	YME1L1 (ENSPTXG00000007177)	PTCHD3 (ENSPTXG00000007178)	ENSPTXG00000007180	MKX (ENSPTXG00000007181)	ODAD2 (ENSPTXG00000007182)	MPP7 (ENSPTXG00000007183)	ENSPTXG00000007184	ENSPTXG00000007186	BAMBI (ENSPTXG00000007189)	MAP3K8 (ENSPTXG00000007191)	MTPAP (ENSPTXG00000007193)	ENSPTXG00000007195
Mainland tiger snake	MODERN SPECIES	42							PRTFDC1 (ENSNSUG00000018033)	ENKUR (ENSNSUG00000018036)	THNSL1 (ENSNSUG00000018037)	GPR158 (ENSNSUG00000018040)	ENSNSUG00000018042	MYO3A (ENSNSUG00000018043)	GAD2 (ENSNSUG00000018045)	APBB1IP (ENSNSUG00000000028)	ENSNSUG00000000104	PDSS1 (ENSNSUG00000000146) ##22	ABI1 (ENSNSUG00000000945)	ACBD5 (ENSNSUG00000000954)	MASTL (ENSNSUG00000000974)	YME1L1 (ENSNSUG00000001034)	ENSNSUG00000001346	ENSNSUG00000001349	MKX (ENSNSUG00000001351)	ODAD2 (ENSNSUG00000001359)	MPP7 (ENSNSUG00000001365)	ENSNSUG00000001391	ENSNSUG00000001400	BAMBI (ENSNSUG00000001834)	MAP3K8 (ENSNSUG00000001835)	MTPAP (ENSNSUG00000001838)	JCAD (ENSNSUG00000001843)
Blue-lipped sea krait	MODERN SPECIES	10014																PDSS1 (ENSLLTG00000006316) ##22	ABI1 (ENSLLTG00000006312)
Indian cobra	MODERN SPECIES	337	ENSNNAG00000017438	ENSNNAG00000017434	ENSNNAG00000017422	RBM48 (ENSNNAG00000017416)	ENSNNAG00000017386	ENSNNAG00000017350	ARHGAP21 (ENSNNAG00000017313)	PRTFDC1 (ENSNNAG00000017299)	ENKUR (ENSNNAG00000017294)	THNSL1 (ENSNNAG00000017291)	GPR158 (ENSNNAG00000017254)	MYO3A (ENSNNAG00000017137)	GAD2 (ENSNNAG00000017095)	APBB1IP (ENSNNAG00000017072)	ENSNNAG00000017055	PDSS1 (ENSNNAG00000017036) ##22	ABI1 (ENSNNAG00000017014)	ACBD5 (ENSNNAG00000016997)	MASTL (ENSNNAG00000016931)	YME1L1 (ENSNNAG00000016893)	PTCHD3 (ENSNNAG00000016883)	ENSNNAG00000016872	MKX (ENSNNAG00000016851)	ODAD2 (ENSNNAG00000016821)	MPP7 (ENSNNAG00000016775)	ENSNNAG00000016770	ENSNNAG00000016742	BAMBI (ENSNNAG00000016735)	MAP3K8 (ENSNNAG00000016730)	MTPAP (ENSNNAG00000016717)	ENSNNAG00000016710
Anura	ANCESTRAL SPECIES	11	ENSGT00940000155240.B	ENSGT00390000004450	ENSGT00940000161000	ENSGT00390000003836	ENSGT00510000049635	ENSGT00940000156098	ENSGT00940000155406	ENSGT00940000162225	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727.hb	ENSGT00940000164060	ENSGT00940000158727.ib	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a	ENSGT00940000154101.b	ENSGT00940000158806	ENSGT00940000158582
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000016990	ENSLLEG00000017008	PRTFDC1 (ENSLLEG00000017040)	ENSLLEG00000017175	ENSLLEG00000017232	THNSL1 (ENSLLEG00000017280)	GPR158 (ENSLLEG00000017327)	ENSLLEG00000017451	MYO3A (ENSLLEG00000017488)	ENSLLEG00000017920	GAD2 (ENSLLEG00000017960)	ENSLLEG00000018476	ENSLLEG00000018576	APBB1IP (ENSLLEG00000018607)	ENSLLEG00000018786	PDSS1 (ENSLLEG00000019009) ##22	ABI1 (ENSLLEG00000019212)	ENSLLEG00000019324	ACBD5 (ENSLLEG00000019347)	MASTL (ENSLLEG00000019497)	YME1L1 (ENSLLEG00000019713)	ENSLLEG00000019940	ENSLLEG00000019996	ENSLLEG00000020063	ENSLLEG00000020135	ENSLLEG00000020236	ENSLLEG00000020292	ENSLLEG00000020404	ENSLLEG00000020482	ENSLLEG00000020558	MKX (ENSLLEG00000020572)
Frog	MODERN SPECIES	6	ptf1a (ENSXETG00000037578)	c10orf67 (ENSXETG00000040821)	otud1 (ENSXETG00000042456)	kiaa1217 (ENSXETG00000005906)	arhgap21 (ENSXETG00000005905)	prtfdc1 (ENSXETG00000005902)	enkur (ENSXETG00000018842)	thnsl1 (ENSXETG00000018834)	gpr158 (ENSXETG00000018822)	myo3a (ENSXETG00000043951)	gad2 (ENSXETG00000026517)	ENSXETG00000044835	ENSXETG00000044233	apbb1ip (ENSXETG00000018807)	ENSXETG00000037493	pdss1 (ENSXETG00000018798) ##22	abi1 (ENSXETG00000018784)	acbd5 (ENSXETG00000018777)	bcl7c (ENSXETG00000018741)	ENSXETG00000046630	yme1l1 (ENSXETG00000004558)	ptchd3 (ENSXETG00000039149)	rab18 (ENSXETG00000004556)	mkx (ENSXETG00000049244)	odad2 (ENSXETG00000004553)	mpp7 (ENSXETG00000004546)	ENSXETG00000040887	wac (ENSXETG00000004545)	bambi (ENSXETG00000048957)	map3k8 (ENSXETG00000002657)	slc4a4 (ENSXETG00000002656)
Coelacanth	MODERN SPECIES	1376													ENSLACG00000012229	ENSLACG00000010884	APBB1IP (ENSLACG00000022255)	PDSS1 (ENSLACG00000007117) ##22	ENSLACG00000006310	ACBD5 (ENSLACG00000003105)	MASTL (ENSLACG00000001427)
Actinopterygii	ANCESTRAL SPECIES	200			ENSGT00940000161000	ENSGT00390000003836	ENSGT00940000156098.b	ENSGT00940000155406	ENSGT00940000164792	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000164060
Neopterygii	ANCESTRAL SPECIES	189			ENSGT00940000161000	ENSGT00390000003836	ENSGT00940000156098.b	ENSGT00940000155406	ENSGT00940000164792	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A	ENSGT00940000154811.B	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000158727	ENSGT00940000157325	ENSGT00940000164060
Osteoglossocephalai	ANCESTRAL SPECIES	232					ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000158727.b.a.a.b	ENSGT00940000158727.a	ENSGT00940000164060	ENSGT00940000158727.b.b	ENSGT00940000164184
Osteoglossiformes	ANCESTRAL SPECIES	219				ENSGT00940000156280.a.b	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918.c.a.b	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951.w	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.o	ENSGT00940000158727.b.b	ENSGT00940000164184.b	ENSGT00940000156227.f.k	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a.`b	ENSGT00940000154101.b.c.b	ENSGT00940000158806.i	ENSGT00940000158582	ENSGT00940000166891.a
Asian bonytongue	MODERN SPECIES	10	ENSSFOG00015025902	DPP6 (ENSSFOG00015009065)	ARHGAP21 (ENSSFOG00015008974)	enkur (ENSSFOG00015018736)	ENSSFOG00015018722	enkur (ENSSFOG00015027948)	THNSL1 (ENSSFOG00015018709)	GPR158 (ENSSFOG00015018686)	anxa13 (ENSSFOG00015018640)	ENSSFOG00015018633	ENSSFOG00015018308	gad2 (ENSSFOG00015029023)	ENSSFOG00015026839	apbb1ip (ENSSFOG00015017914)	ENSSFOG00015017877	pdss1 (ENSSFOG00015017850) ##22	abi1a (ENSSFOG00015033206)	acbd5a (ENSSFOG00015017701)	mastl (ENSSFOG00015017658)	YME1L1 (ENSSFOG00015017594)	fasn2 (ENSSFOG00015017566)	PTCHD3 (ENSSFOG00015017556)	ODAD2 (ENSSFOG00015017363)	mkxa (ENSSFOG00015017474)	rab18a (ENSSFOG00015029084)	PTCHD3 (ENSSFOG00015030980)	PTCHD3 (ENSSFOG00015017418)	PTCHD3 (ENSSFOG00015017387)	ENSSFOG00015017405	ODAD2 (ENSSFOG00015017505)	SRSF1 (ENSSFOG00015030558)
P. kingsleyae	MODERN SPECIES	20	DPP6 (ENSPKIG00000010970)	ENSPKIG00000010844	ARHGAP21 (ENSPKIG00000010718)	ENSPKIG00000010647	enkur (ENSPKIG00000010616)	THNSL1 (ENSPKIG00000010604)	GPR158 (ENSPKIG00000010581)	anxa13 (ENSPKIG00000010518)	ENSPKIG00000010474	myo3a (ENSPKIG00000010424)	ENSPKIG00000010385	gad2 (ENSPKIG00000010359)	ENSPKIG00000010332	ENSPKIG00000010316	apbb1ip (ENSPKIG00000010262)	pdss1 (ENSPKIG00000010189) ##22	abi1a (ENSPKIG00000010117)	acbd5a (ENSPKIG00000010077)	mastl (ENSPKIG00000009992)	YME1L1 (ENSPKIG00000009912)	fasn2 (ENSPKIG00000009871)	PTCHD3 (ENSPKIG00000009844)	rab18a (ENSPKIG00000009825)	mkxa (ENSPKIG00000009793)	ODAD2 (ENSPKIG00000009701)	mpp7a (ENSPKIG00000009545)	ENSPKIG00000009473	waca (ENSPKIG00000009460)	bambia (ENSPKIG00000009444)	MAP3K8 (ENSPKIG00000009420)	MTPAP (ENSPKIG00000009397)
Clupeocephala	ANCESTRAL SPECIES	256					ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000158727.a	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b
Euteleosteomorpha	ANCESTRAL SPECIES	31	ENSGT00940000158304	ENSGT00940000156280.a.b	ENSGT00490000043388.b.b	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.n	ENSGT00940000158727.a	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c
Acanthomorphata	ANCESTRAL SPECIES	17				ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Euacanthomorphacea	ANCESTRAL SPECIES	16	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c
Percomorphaceae	ANCESTRAL SPECIES	28	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Percomorphaceae_B	ANCESTRAL SPECIES	20	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Ovalentaria	ANCESTRAL SPECIES	21	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Atherinomorphae	ANCESTRAL SPECIES	19	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Oryzias	ANCESTRAL SPECIES	18	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c.b	ENSGT00510000046981.b.a.c.a	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n.k	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378
Oryzias_a	ANCESTRAL SPECIES	16	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c.b	ENSGT00510000046981.b.a.c.a	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n.k	ENSGT00940000166120	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378	ENSGT00390000017291.a.e
Japanese Medaka HdrR	MODERN SPECIES	12	apodb (ENSORLG00000013153)	apodb (ENSORLG00000013130)	apodb (ENSORLG00000030628)	ARHGAP21 (ENSORLG00000013115)	ENSORLG00000013074	enkur (ENSORLG00000013051)	THNSL1 (ENSORLG00000013046)	PTCHD3 (ENSORLG00000013041)	ENSORLG00000013031	GPR158 (ENSORLG00000013035)	anxa13 (ENSORLG00000013022)	myo3a (ENSORLG00000012985)	gad2 (ENSORLG00000012966)	ENSORLG00000025726	apbb1ip (ENSORLG00000012956)	pdss1 (ENSORLG00000012939) ##22	abi1a (ENSORLG00000012925)	acbd5a (ENSORLG00000012866)	mastl (ENSORLG00000012841)	YME1L1 (ENSORLG00000012820)	pks1 (ENSORLG00000012793)	ENSORLG00000029622	fasn2 (ENSORLG00000012785)	rdh12l (ENSORLG00000012778)	ENSORLG00000026936	ENSORLG00000028135	ENSORLG00000012719	ENSORLG00000026870	ENSORLG00000024416	ENSORLG00000023346	ENSORLG00000026480
Chinese medaka	MODERN SPECIES	4111																pdss1 (ENSOSIG00000002334) ##22
Oryzias_b	ANCESTRAL SPECIES	16	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c.b	ENSGT00510000046981.b.a.c.a	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n.k	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e
Indian medaka	MODERN SPECIES	14	apodb (ENSOMEG00000001108)	apodb (ENSOMEG00000001110)	apodb (ENSOMEG00000001111)	ARHGAP21 (ENSOMEG00000001113)	ENSOMEG00000001015	enkur (ENSOMEG00000001116)	THNSL1 (ENSOMEG00000001118)	PTCHD3 (ENSOMEG00000001119)	GPR158 (ENSOMEG00000001121)	anxa13 (ENSOMEG00000001123)	myo3a (ENSOMEG00000001129)	ENSOMEG00000001132	gad2 (ENSOMEG00000001133)	ENSOMEG00000001136	apbb1ip (ENSOMEG00000001137)	pdss1 (ENSOMEG00000001141) ##22	abi1a (ENSOMEG00000001147)	ENSOMEG00000001149	acbd5a (ENSOMEG00000001151)	mastl (ENSOMEG00000001153)	YME1L1 (ENSOMEG00000001154)	ENSOMEG00000001156	fasn2 (ENSOMEG00000001159)	rdh12l (ENSOMEG00000001161)	ca2 (ENSOMEG00000001164)	ENSOMEG00000001166	ENSOMEG00000001170	ENSOMEG00000001174	ralaa (ENSOMEG00000001176)	zgc:111976 (ENSOMEG00000001184)	FBXL7 (ENSOMEG00000001188)
Cyprinodontiformes	ANCESTRAL SPECIES	20	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Cyprinodontoidei	ANCESTRAL SPECIES	27	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.e	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Poeciliinae	ANCESTRAL SPECIES	20	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g.d	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.e	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Poecilia	ANCESTRAL SPECIES	17	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g.d	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.e	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
NAME_6	ANCESTRAL SPECIES	67	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g.d	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.e	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Sailfin molly	MODERN SPECIES	26	cops9 (ENSPLAG00000012135)	otos (ENSPLAG00000012128)	apodb (ENSPLAG00000012124)	ARHGAP21 (ENSPLAG00000012105)	ENSPLAG00000012081	enkur (ENSPLAG00000012024)	THNSL1 (ENSPLAG00000011937)	PTCHD3 (ENSPLAG00000011927)	GPR158 (ENSPLAG00000011910)	anxa13 (ENSPLAG00000011876)	myo3a (ENSPLAG00000011863)	ENSPLAG00000011741	gad2 (ENSPLAG00000011685)	ENSPLAG00000010618	apbb1ip (ENSPLAG00000010596)	pdss1 (ENSPLAG00000010580) ##22	abi1a (ENSPLAG00000010545)	acbd5a (ENSPLAG00000010474)	mastl (ENSPLAG00000010366)	YME1L1 (ENSPLAG00000010353)	ENSPLAG00000010269	fasn2 (ENSPLAG00000010247)	rdh12l (ENSPLAG00000010187)	ca2 (ENSPLAG00000010162)	ENSPLAG00000010138
Amazon molly	MODERN SPECIES	323	cops9 (ENSPFOG00000006618)	otos (ENSPFOG00000006648)	apodb (ENSPFOG00000006656)	ARHGAP21 (ENSPFOG00000006733)	ENSPFOG00000007024	enkur (ENSPFOG00000007190)	THNSL1 (ENSPFOG00000007232)	PTCHD3 (ENSPFOG00000007248)	GPR158 (ENSPFOG00000007298)	anxa13 (ENSPFOG00000007461)	ENSPFOG00000007652	myo3a (ENSPFOG00000007720)	gad2 (ENSPFOG00000008057)	ENSPFOG00000008302	apbb1ip (ENSPFOG00000008323)	pdss1 (ENSPFOG00000008480) ##22	abi1a (ENSPFOG00000008544)	acbd5a (ENSPFOG00000008717)	mastl (ENSPFOG00000008783)	YME1L1 (ENSPFOG00000008880)	ENSPFOG00000009182	fasn2 (ENSPFOG00000009222)	rdh12l (ENSPFOG00000009263)	ca2 (ENSPFOG00000009267)	ENSPFOG00000009449
Guppy	MODERN SPECIES	451	and1 (ENSPREG00000023031)	otos (ENSPREG00000023035)	cops9 (ENSPREG00000023038)	apodb (ENSPREG00000023039)	ARHGAP21 (ENSPREG00000023043)	ENSPREG00000023054	enkur (ENSPREG00000023059)	THNSL1 (ENSPREG00000023065)	ENSPREG00000000585	GPR158 (ENSPREG00000000608)	anxa13 (ENSPREG00000000619)	myo3a (ENSPREG00000000681)	gad2 (ENSPREG00000000907)	ENSPREG00000000980	apbb1ip (ENSPREG00000001004)	pdss1 (ENSPREG00000001015) ##22	abi1a (ENSPREG00000001070)	ENSPREG00000001159	mastl (ENSPREG00000001177)	YME1L1 (ENSPREG00000001191)	ENSPREG00000001254	fasn2 (ENSPREG00000001289)	rdh12l (ENSPREG00000001300)	ca2 (ENSPREG00000001326)	ENSPREG00000001935	ENSPREG00000001956	ENSPREG00000002005	ralaa (ENSPREG00000002019)	zgc:111976 (ENSPREG00000002041)	FBXL7 (ENSPREG00000002066)	ENSPREG00000002086
Platyfish	MODERN SPECIES	13	DSEL (ENSXMAG00000020256)	ENSXMAG00000003114	ENSXMAG00000003058	CDH7 (ENSXMAG00000008244)	ENSXMAG00000011958	IMPA1 (ENSXMAG00000028456)	ENSXMAG00000008252	ENSXMAG00000021795	anxa13 (ENSXMAG00000023561)	ENSXMAG00000022681	myo3a (ENSXMAG00000008275)	gad2 (ENSXMAG00000008296)	ENSXMAG00000026469	apbb1ip (ENSXMAG00000008314)	ENSXMAG00000024092	pdss1 (ENSXMAG00000008320) ##22	abi1a (ENSXMAG00000008330)	acbd5a (ENSXMAG00000008340)	mastl (ENSXMAG00000008347)	YME1L1 (ENSXMAG00000008354)	ENSXMAG00000024610	fasn2 (ENSXMAG00000008371)	rdh12l (ENSXMAG00000008374)	ENSXMAG00000018368	ENSXMAG00000008378	ENSXMAG00000028998	ENSXMAG00000008396	ENSXMAG00000023556	ENSXMAG00000008398	ralaa (ENSXMAG00000026299)	zgc:111976 (ENSXMAG00000008412)
NAME_4	ANCESTRAL SPECIES	146	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.e	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A.bc	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00390000015564	ENSGT00940000164239.b.b
Sheepshead minnow	MODERN SPECIES	618	otos (ENSCVAG00000017151)	cops9 (ENSCVAG00000017145)	and1 (ENSCVAG00000017128)	ENSCVAG00000017092	ENSCVAG00000000435	ENSCVAG00000017051	tfr1b (ENSCVAG00000017038)	ENSCVAG00000000432	MAP3K15 (ENSCVAG00000016994)	ENSCVAG00000016900	myo3a (ENSCVAG00000016890)	gad2 (ENSCVAG00000016763)	ENSCVAG00000016680	apbb1ip (ENSCVAG00000016659)	ENSCVAG00000016646	pdss1 (ENSCVAG00000016628) ##22	ENSCVAG00000016593
Mummichog	MODERN SPECIES	2363	otos (ENSFHEG00000003109)	apodb (ENSFHEG00000003094)	apodb (ENSFHEG00000003090)	ARHGAP21 (ENSFHEG00000003051)	ENSFHEG00000002795	enkur (ENSFHEG00000002771)	THNSL1 (ENSFHEG00000002761)	PTCHD3 (ENSFHEG00000002752)	GPR158 (ENSFHEG00000002739)	anxa13 (ENSFHEG00000002679)	ENSFHEG00000002666	myo3a (ENSFHEG00000002652)	gad2 (ENSFHEG00000002595)	ENSFHEG00000002579	ENSFHEG00000002572	pdss1 (ENSFHEG00000002564) ##22	abi1a (ENSFHEG00000002560)	acbd5a (ENSFHEG00000002547)	mastl (ENSFHEG00000002539)	YME1L1 (ENSFHEG00000002531)	ENSFHEG00000002496	fasn2 (ENSFHEG00000002480)	ENSFHEG00000002442	rdh12l (ENSFHEG00000002438)	ENSFHEG00000002428	ENSFHEG00000002414	ENSFHEG00000002404
Aplocheiloidei	ANCESTRAL SPECIES	18	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e
Mangrove rivulus	MODERN SPECIES	7			apodb (ENSKMAG00000019330)	ARHGAP21 (ENSKMAG00000019158)	ENSKMAG00000019093	enkur (ENSKMAG00000019080)	THNSL1 (ENSKMAG00000019062)	PTCHD3 (ENSKMAG00000019047)	GPR158 (ENSKMAG00000019000)	anxa13 (ENSKMAG00000018966)	ENSKMAG00000018949	myo3a (ENSKMAG00000018687)	gad2 (ENSKMAG00000018574)	ENSKMAG00000018532	apbb1ip (ENSKMAG00000018509)	pdss1 (ENSKMAG00000018477) ##22	abi1a (ENSKMAG00000018407)	acbd5a (ENSKMAG00000018390)	mastl (ENSKMAG00000018371)	YME1L1 (ENSKMAG00000018314)	ENSKMAG00000018293	fasn2 (ENSKMAG00000018264)	rdh12l (ENSKMAG00000018234)	ca2 (ENSKMAG00000018193)	ENSKMAG00000018173	ENSKMAG00000018155	ENSKMAG00000018139	ralaa (ENSKMAG00000018128)	zgc:111976 (ENSKMAG00000018098)	FBXL7 (ENSKMAG00000018078)	ENSKMAG00000018059
Turquoise killifish	MODERN SPECIES	1617	TMTOPSB (ENSNFUG00015010868)	AND1 (ENSNFUG00015010862)	ENSNFUG00015010857	otos (ENSNFUG00015010851)	APOD (ENSNFUG00015010843)	ARHGAP21 (ENSNFUG00015009226)	ENSNFUG00015009006	enkur (ENSNFUG00015020845)	THNSL1 (ENSNFUG00015020801)	PTCHD3 (ENSNFUG00015020793)	GPR158 (ENSNFUG00015020721)	ANXA13 (ENSNFUG00015020673)	myo3a (ENSNFUG00015020615)	GAD2 (ENSNFUG00015020333)	apbb1ip (ENSNFUG00015020312)	pdss1 (ENSNFUG00015020284) ##22	abi1a (ENSNFUG00015019616)	acbd5a (ENSNFUG00015019568)	MASTL (ENSNFUG00015019550)	ENSNFUG00015019421	fasn2 (ENSNFUG00015019418)	RDH12L (ENSNFUG00015019415)	ENSNFUG00015019412	ENSNFUG00015019410	BLOC1S5 (ENSNFUG00015019408)	EEF1E1 (ENSNFUG00015019406)	ENSNFUG00015019403	SLC35B3 (ENSNFUG00015019048)	ENSNFUG00015019025	ENSNFUG00015019017	ENSNFUG00015019011
Ovalentaria_B	ANCESTRAL SPECIES	20	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Pomacentridae	ANCESTRAL SPECIES	11	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Pomacentridae_A	ANCESTRAL SPECIES	8	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000166120.j.a	ENSGT00940000166120.j.b	ENSGT00940000164060.n	ENSGT00940000166120.i	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142
Amphiprion	ANCESTRAL SPECIES	7	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n.g	ENSGT00940000164060.n.h	ENSGT00940000166120.i.b	ENSGT00940000166120.j.a	ENSGT00940000166120.j.b	ENSGT00940000166120.i.a	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b
Orange clownfish	MODERN SPECIES	14	otos (ENSAPEG00000009475)	apodb (ENSAPEG00000009485)	ARHGAP21 (ENSAPEG00000009497)	ENSAPEG00000009618	enkur (ENSAPEG00000009632)	THNSL1 (ENSAPEG00000009656)	ENSAPEG00000009664	GPR158 (ENSAPEG00000009689)	anxa13 (ENSAPEG00000009788)	ENSAPEG00000009802	myo3a (ENSAPEG00000009841)	gad2 (ENSAPEG00000010049)	ENSAPEG00000010062	apbb1ip (ENSAPEG00000010087)	ENSAPEG00000010105	pdss1 (ENSAPEG00000010130) ##22	abi1a (ENSAPEG00000010161)	acbd5a (ENSAPEG00000010238)	mastl (ENSAPEG00000010257)	YME1L1 (ENSAPEG00000010274)	ENSAPEG00000010339	fasn2 (ENSAPEG00000010368)	fasn2 (ENSAPEG00000010425)	rdh12l (ENSAPEG00000010442)	rdh12l (ENSAPEG00000010460)	rdh12l (ENSAPEG00000010501)	ca2 (ENSAPEG00000010525)	ENSAPEG00000010551	ENSAPEG00000010563	RALYL (ENSAPEG00000010582)	ENSAPEG00000010623
Clown anemonefish	MODERN SPECIES	1111															ENSAOCG00000023637	pdss1 (ENSAOCG00000023629) ##22	abi1a (ENSAOCG00000023608)	acbd5a (ENSAOCG00000023557)	mastl (ENSAOCG00000023546)	YME1L1 (ENSAOCG00000023522)	ENSAOCG00000023466	fasn2 (ENSAOCG00000023439)	ENSAOCG00000023415	ENSAOCG00000023407	ENSAOCG00000023397
Spiny chromis	MODERN SPECIES	815												myo3a (ENSAPOG00000022741)	gad2 (ENSAPOG00000022384)	apbb1ip (ENSAPOG00000022312)	ENSAPOG00000022271	pdss1 (ENSAPOG00000022247) ##22	abi1a (ENSAPOG00000022185)	acbd5a (ENSAPOG00000022107)	mastl (ENSAPOG00000022049)	YME1L1 (ENSAPOG00000022029)	ENSAPOG00000021950	fasn2 (ENSAPOG00000021939)
Bicolor damselfish	MODERN SPECIES	1264													ENSSPAG00000007054	apbb1ip (ENSSPAG00000006990)	ENSSPAG00000006839	pdss1 (ENSSPAG00000006783) ##22	abi1a (ENSSPAG00000006706)	acbd5a (ENSSPAG00000006677)	mastl (ENSSPAG00000006609)	YME1L1 (ENSSPAG00000006532)	ENSSPAG00000006506	fasn2 (ENSSPAG00000006496)	rdh12l (ENSSPAG00000006476)	rdh12l (ENSSPAG00000006423)	ca2 (ENSSPAG00000006383)	ENSSPAG00000006367
Cichlidae	ANCESTRAL SPECIES	18	ENSGT00510000046981.b.a.c.c.a	ENSGT00510000046981.b.a.c.c.b	ENSGT00510000046981.b.a.c.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	20	ENSGT00510000046981.b.a.c.c.a	ENSGT00510000046981.b.a.c.c.b	ENSGT00510000046981.b.a.c.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e.y.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	19	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c.c.a	ENSGT00510000046981.b.a.c.c.b	ENSGT00510000046981.b.a.c.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e.y.b
Haplochromini	ANCESTRAL SPECIES	21	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c.c.a	ENSGT00510000046981.b.a.c.c.b	ENSGT00510000046981.b.a.c.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e.y.b
Burton s mouthbrooder	MODERN SPECIES	410	and1 (ENSHBUG00000014154)	apodb (ENSHBUG00000014166)	apodb (ENSHBUG00000014179)	apodb (ENSHBUG00000014192)	ARHGAP21 (ENSHBUG00000014212)	enkur (ENSHBUG00000014272)	THNSL1 (ENSHBUG00000014292)	ENSHBUG00000014311	GPR158 (ENSHBUG00000014329)	anxa13 (ENSHBUG00000014345)	myo3a (ENSHBUG00000014652)	gad2 (ENSHBUG00000014719)	ENSHBUG00000014731	apbb1ip (ENSHBUG00000014742)	ENSHBUG00000014848	pdss1 (ENSHBUG00000014906) ##22	abi1a (ENSHBUG00000015013)	acbd5a (ENSHBUG00000001167)	mastl (ENSHBUG00000015148)	YME1L1 (ENSHBUG00000015223)	ENSHBUG00000015259	fasn2 (ENSHBUG00000015314)	rdh12l (ENSHBUG00000015353)	ca2 (ENSHBUG00000015373)	ENSHBUG00000015387	ENSHBUG00000015412
Haplochromini_A	ANCESTRAL SPECIES	21	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c.c.a	ENSGT00510000046981.b.a.c.c.b	ENSGT00510000046981.b.a.c.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e.y.b
P. nyererei	MODERN SPECIES	332	apodb (ENSPNYG00000002334)	apodb (ENSPNYG00000002380)	apodb (ENSPNYG00000002398)	ARHGAP21 (ENSPNYG00000002416)	ENSPNYG00000002441	ENSPNYG00000002477	THNSL1 (ENSPNYG00000002491)	PTCHD3 (ENSPNYG00000002503)	GPR158 (ENSPNYG00000002525)	anxa13 (ENSPNYG00000002576)	myo3a (ENSPNYG00000002637)	gad2 (ENSPNYG00000002947)	ENSPNYG00000003001	apbb1ip (ENSPNYG00000003017)	ENSPNYG00000003064	pdss1 (ENSPNYG00000003149) ##22	abi1a (ENSPNYG00000003187)	acbd5a (ENSPNYG00000003214)	mastl (ENSPNYG00000003292)	YME1L1 (ENSPNYG00000003354)	ENSPNYG00000003420	fasn2 (ENSPNYG00000003462)	rdh12l (ENSPNYG00000003493)	ca2 (ENSPNYG00000003517)	ENSPNYG00000003540	ENSPNYG00000003548	ENSPNYG00000003581	ENSPNYG00000003594	ralaa (ENSPNYG00000003614)	zgc:111976 (ENSPNYG00000003638)	FBXL7 (ENSPNYG00000003691)
Haplochromini_B	ANCESTRAL SPECIES	18	ENSGT00510000046981.b.a.c.c.a	ENSGT00510000046981.b.a.c.c.b	ENSGT00510000046981.b.a.c.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.k.a.c	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e.y.b
Zebra mbuna	MODERN SPECIES	1112	apodb (ENSMZEG00005018977)	apodb (ENSMZEG00005018973)	apodb (ENSMZEG00005018963)	ARHGAP21 (ENSMZEG00005018941)	ENSMZEG00005018929	enkur (ENSMZEG00005018925)	THNSL1 (ENSMZEG00005018922)	ENSMZEG00005018916	GPR158 (ENSMZEG00005018913)	anxa13 (ENSMZEG00005018909)	myo3a (ENSMZEG00005018898)	gad2 (ENSMZEG00005018886)	ENSMZEG00005018880	apbb1ip (ENSMZEG00005018864)	ENSMZEG00005018852	pdss1 (ENSMZEG00005018836) ##22	abi1a (ENSMZEG00005018825)	acbd5a (ENSMZEG00005018817)	mastl (ENSMZEG00005018811)	YME1L1 (ENSMZEG00005018792)	ENSMZEG00005018783	fasn2 (ENSMZEG00005018775)	fasn2 (ENSMZEG00005018766)	rdh12l (ENSMZEG00005018758)	ca2 (ENSMZEG00005018756)	ENSMZEG00005018753	ENSMZEG00005018748	ENSMZEG00005018740	ralaa (ENSMZEG00005018734)	zgc:111976 (ENSMZEG00005018725)	FBXL7 (ENSMZEG00005018717)
Eastern happy	MODERN SPECIES	21	apodb (ENSACLG00000008937)	ENSACLG00000008930	apodb (ENSACLG00000008919)	ARHGAP21 (ENSACLG00000008833)	ENSACLG00000008499	ENSACLG00000008493	THNSL1 (ENSACLG00000008487)	ENSACLG00000008479	GPR158 (ENSACLG00000008455)	anxa13 (ENSACLG00000008444)	myo3a (ENSACLG00000008399)	gad2 (ENSACLG00000008379)	ENSACLG00000008371	apbb1ip (ENSACLG00000008353)	ENSACLG00000008325	pdss1 (ENSACLG00000008306) ##22	abi1a (ENSACLG00000008232)	acbd5a (ENSACLG00000008208)	mastl (ENSACLG00000008202)	YME1L1 (ENSACLG00000008169)	ENSACLG00000008152	fasn2 (ENSACLG00000008145)	rdh12l (ENSACLG00000007679)	ca2 (ENSACLG00000006999)	ENSACLG00000006989	ENSACLG00000006949	ENSACLG00000006464	ralaa (ENSACLG00000006454)	zgc:111976 (ENSACLG00000006440)	FBXL7 (ENSACLG00000006432)	ENSACLG00000006055
Lyretail cichlid	MODERN SPECIES	351	apodb (ENSNBRG00000004654)	apodb (ENSNBRG00000004681)	ARHGAP21 (ENSNBRG00000004700)	ENSNBRG00000004783	ENSNBRG00000004971	THNSL1 (ENSNBRG00000004985)	ENSNBRG00000004994	ENSNBRG00000005009	GPR158 (ENSNBRG00000005020)	anxa13 (ENSNBRG00000005120)	myo3a (ENSNBRG00000005137)	gad2 (ENSNBRG00000005281)	ENSNBRG00000005481	apbb1ip (ENSNBRG00000005496)	ENSNBRG00000005537	pdss1 (ENSNBRG00000005558) ##22	abi1a (ENSNBRG00000005592)	ENSNBRG00000005645	mastl (ENSNBRG00000005651)	YME1L1 (ENSNBRG00000005686)	ENSNBRG00000005742
Nile tilapia	MODERN SPECIES	21	apodb (ENSONIG00000006466)	apodb (ENSONIG00000006464)	apodb (ENSONIG00000006468)	ARHGAP21 (ENSONIG00000006455)	ENSONIG00000006453	enkur (ENSONIG00000006449)	THNSL1 (ENSONIG00000006448)	PTCHD3 (ENSONIG00000006447)	GPR158 (ENSONIG00000006444)	anxa13 (ENSONIG00000031176)	ENSONIG00000023072	myo3a (ENSONIG00000006426)	gad2 (ENSONIG00000006415)	apbb1ip (ENSONIG00000006409)	ENSONIG00000006407	pdss1 (ENSONIG00000006404) ##22	abi1a (ENSONIG00000006397)	acbd5a (ENSONIG00000006391)	mastl (ENSONIG00000006385)	YME1L1 (ENSONIG00000006381)	ENSONIG00000041088	fasn2 (ENSONIG00000038043)	rdh12l (ENSONIG00000006379)	ca2 (ENSONIG00000006377)	ENSONIG00000034681	ENSONIG00000006372	ENSONIG00000006371	ralaa (ENSONIG00000006367)	fbxl7 (ENSONIG00000006365)	ENSONIG00000006360	ENSONIG00000037413
Midas cichlid	MODERN SPECIES	147	apodb (ENSACIG00000003267)	apodb (ENSACIG00000003254)	apodb (ENSACIG00000003242)	ARHGAP21 (ENSACIG00000002947)	ENSACIG00000002617	ENSACIG00000002581	THNSL1 (ENSACIG00000002562)	ENSACIG00000002548	GPR158 (ENSACIG00000002483)	anxa13 (ENSACIG00000002448)	myo3a (ENSACIG00000002361)	gad2 (ENSACIG00000002270)	ENSACIG00000002254	apbb1ip (ENSACIG00000002216)	ENSACIG00000002172	pdss1 (ENSACIG00000002149) ##22	abi1a (ENSACIG00000002131)	acbd5a (ENSACIG00000002067)	mastl (ENSACIG00000002036)	YME1L1 (ENSACIG00000001999)	ENSACIG00000001979	fasn2 (ENSACIG00000001959)	rdh12l (ENSACIG00000001911)	ca2 (ENSACIG00000001403)	ENSACIG00000001378	ENSACIG00000001349	ENSACIG00000001335	ENSACIG00000001208	ralaa (ENSACIG00000001178)	zgc:111976 (ENSACIG00000001094)	FBXL7 (ENSACIG00000001060)
Percomorphaceae_C	ANCESTRAL SPECIES	21	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Eupercaria	ANCESTRAL SPECIES	20	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Tetraodontidae	ANCESTRAL SPECIES	18	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT01000000218615	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e
Tetraodon	MODERN SPECIES	21	cops9 (ENSTNIG00000013630)	ENSTNIG00000001064	TNK2 (ENSTNIG00000013631)	tfr1b (ENSTNIG00000013632)	otos (ENSTNIG00000013633)	apodb (ENSTNIG00000013634)	ARHGAP21 (ENSTNIG00000013635)	ENSTNIG00000013636	ENSTNIG00000013637	enkur (ENSTNIG00000001171)	apbb1ip (ENSTNIG00000013638)	gad2 (ENSTNIG00000013639)	myo3a (ENSTNIG00000013640)	GPR158 (ENSTNIG00000013641)	THNSL1 (ENSTNIG00000013642)	pdss1 (ENSTNIG00000013643) ##22	ENSTNIG00000013644	abi1a (ENSTNIG00000013645)	acbd5a (ENSTNIG00000013646)	mastl (ENSTNIG00000013647)	YME1L1 (ENSTNIG00000013648)	ENSTNIG00000013649	ENSTNIG00000013650	rdh12l (ENSTNIG00000013651)	ca2 (ENSTNIG00000013652)	ENSTNIG00000013653	ENSTNIG00000013654	ralaa (ENSTNIG00000013655)	ENSTNIG00000000348	FBXL7 (ENSTNIG00000013656)	ENSTNIG00000013657
Eupecaria_A	ANCESTRAL SPECIES	19	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Ballan wrasse	MODERN SPECIES	59	cops9 (ENSLBEG00000009381)	otos (ENSLBEG00000009393)	apodb (ENSLBEG00000009406)	ARHGAP21 (ENSLBEG00000009457)	ENSLBEG00000009641	enkur (ENSLBEG00000009680)	THNSL1 (ENSLBEG00000009711)	PTCHD3 (ENSLBEG00000009724)	GPR158 (ENSLBEG00000009752)	ENSLBEG00000009792	anxa13 (ENSLBEG00000009824)	myo3a (ENSLBEG00000009893)	gad2 (ENSLBEG00000010001)	apbb1ip (ENSLBEG00000010048)	ENSLBEG00000010124	pdss1 (ENSLBEG00000010163) ##22	abi1a (ENSLBEG00000010273)	acbd5a (ENSLBEG00000010434)	mastl (ENSLBEG00000010569)	YME1L1 (ENSLBEG00000010656)	ENSLBEG00000010754	fasn2 (ENSLBEG00000010807)	rdh12l (ENSLBEG00000010904)	ca2 (ENSLBEG00000010948)	ENSLBEG00000010979	ENSLBEG00000011011	ENSLBEG00000011043	ralaa (ENSLBEG00000011106)	zgc:111976 (ENSLBEG00000011144)	FBXL7 (ENSLBEG00000011195)	ENSLBEG00000011215
Eupecaria_B	ANCESTRAL SPECIES	19	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Perciformes	ANCESTRAL SPECIES	21	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00940000160169	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c
Perciformes_a	ANCESTRAL SPECIES	22	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00940000160169	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c
Channel bull blenny	MODERN SPECIES	12	otos (ENSCGOG00000017014)	apodb (ENSCGOG00000017005)	apodb (ENSCGOG00000017001)	ARHGAP21 (ENSCGOG00000016457)	ENSCGOG00000016380	enkur (ENSCGOG00000016376)	THNSL1 (ENSCGOG00000016372)	ENSCGOG00000016370	GPR158 (ENSCGOG00000016366)	anxa13 (ENSCGOG00000016333)	ENSCGOG00000016329	ENSCGOG00000016323	gad2 (ENSCGOG00000015811)	apbb1ip (ENSCGOG00000015785)	ENSCGOG00000015769	pdss1 (ENSCGOG00000015738) ##22	abi1a (ENSCGOG00000015290)	acbd5a (ENSCGOG00000015251)	mastl (ENSCGOG00000015245)	YME1L1 (ENSCGOG00000014425)	ENSCGOG00000014360	fasn2 (ENSCGOG00000014353)	fasn2 (ENSCGOG00000014346)	rdh12l (ENSCGOG00000014344)	ca2 (ENSCGOG00000014240)	rad51b (ENSCGOG00000014235)	ENSCGOG00000014232	ENSCGOG00000014226	ENSCGOG00000014202	ralaa (ENSCGOG00000014177)	FBXL7 (ENSCGOG00000014172)
Pike perch	MODERN SPECIES	140	and1 (ENSSLUG00000017192)	cops9 (ENSSLUG00000017210)	otos (ENSSLUG00000017220)	apodb (ENSSLUG00000017226)	ARHGAP21 (ENSSLUG00000017271)	ENSSLUG00000018012	enkur (ENSSLUG00000018020)	THNSL1 (ENSSLUG00000018023)	ENSSLUG00000018025	GPR158 (ENSSLUG00000018029)	anxa13 (ENSSLUG00000018062)	myo3a (ENSSLUG00000018260)	gad2 (ENSSLUG00000018520)	apbb1ip (ENSSLUG00000018952)	ENSSLUG00000018964	pdss1 (ENSSLUG00000018982) ##22	abi1a (ENSSLUG00000019007)	acbd5a (ENSSLUG00000019063)	mastl (ENSSLUG00000019069)	YME1L1 (ENSSLUG00000019115)	ENSSLUG00000020009	fasn2 (ENSSLUG00000020014)	rdh12l (ENSSLUG00000020017)	ca2 (ENSSLUG00000020019)	rad51b (ENSSLUG00000020022)	ENSSLUG00000020023	ENSSLUG00000020026	RALYL (ENSSLUG00000020030)	ENSSLUG00000020033	ralaa (ENSSLUG00000020042)	zgc:111976 (ENSSLUG00000020049)
Cottioidei	ANCESTRAL SPECIES	21		ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00510000046981.b.a.c	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000155918.c.a	ENSGT00390000006712	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00940000160169	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a
Lumpfish	MODERN SPECIES	12	vipr2 (ENSCLMG00005022785)	otos (ENSCLMG00005022788)	ENSCLMG00005022789	ENSCLMG00005022796	enkur (ENSCLMG00005022817)	THNSL1 (ENSCLMG00005022821)	GPR158 (ENSCLMG00005022824)	ENSCLMG00005022825	ENSCLMG00005022826	GEMIN6 (ENSCLMG00005022827)	anxa13 (ENSCLMG00005022828)	myo3a (ENSCLMG00005022835)	gad2 (ENSCLMG00005022838)	apbb1ip (ENSCLMG00005022840)	ENSCLMG00005022841	pdss1 (ENSCLMG00005022842) ##22	abi1a (ENSCLMG00005022844)	acbd5a (ENSCLMG00005022846)	mastl (ENSCLMG00005022847)	YME1L1 (ENSCLMG00005022849)	ENSCLMG00005022871	fasn2 (ENSCLMG00005022872)	rdh12l (ENSCLMG00005022873)	ca2 (ENSCLMG00005022874)	rad51b (ENSCLMG00005022875)	ENSCLMG00005022876	ENSCLMG00005022877	ENSCLMG00005022878	ralaa (ENSCLMG00005022880)	zgc:111976 (ENSCLMG00005022881)	FBXL7 (ENSCLMG00005022882)
Stickleback	MODERN SPECIES	20	and1 (ENSGACG00000005377)	cops9 (ENSGACG00000005374)	otos (ENSGACG00000005371)	apodb (ENSGACG00000005360)	ARHGAP21 (ENSGACG00000005346)	ENSGACG00000005328	enkur (ENSGACG00000005314)	THNSL1 (ENSGACG00000005308)	GPR158 (ENSGACG00000005288)	ENSGACG00000005286	anxa13 (ENSGACG00000005172)	myo3a (ENSGACG00000005155)	gad2 (ENSGACG00000005146)	ENSGACG00000005141	ENSGACG00000005134	pdss1 (ENSGACG00000005116) ##22	abi1a (ENSGACG00000005109)	acbd5a (ENSGACG00000005097)	mastl (ENSGACG00000005087)	ENSGACG00000005074	fasn2 (ENSGACG00000005071)	rdh12l (ENSGACG00000005055)	ca2 (ENSGACG00000004999)	rad51b (ENSGACG00000004998)	ENSGACG00000004993	ENSGACG00000004991	ENSGACG00000004982	ralaa (ENSGACG00000004967)	zgc:111976 (ENSGACG00000004956)	FBXL7 (ENSGACG00000004953)	ENSGACG00000004949
Eupecaria_C	ANCESTRAL SPECIES	19	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	17	ENSGT01100000266531	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378
Large yellow croaker	MODERN SPECIES	494	ENSLCRG00005016748	otos (ENSLCRG00005016749)	apodb (ENSLCRG00005016750)	ARHGAP21 (ENSLCRG00005016754)	ENSLCRG00005017007	enkur (ENSLCRG00005017008)	THNSL1 (ENSLCRG00005017009)	ENSLCRG00005017011	GPR158 (ENSLCRG00005017012)	anxa13 (ENSLCRG00005017026)	ENSLCRG00005017123	myo3a (ENSLCRG00005017125)	gad2 (ENSLCRG00005017165)	apbb1ip (ENSLCRG00005017968)	ENSLCRG00005017970	pdss1 (ENSLCRG00005017973) ##22	abi1a (ENSLCRG00005017988)	acbd5a (ENSLCRG00005018172)	mastl (ENSLCRG00005018175)	YME1L1 (ENSLCRG00005018193)	ENSLCRG00005019318	fasn2 (ENSLCRG00005019319)	rdh12l (ENSLCRG00005019320)	ca2 (ENSLCRG00005019322)	ENSLCRG00005019323	ENSLCRG00005019324	ENSLCRG00005019326	ralaa (ENSLCRG00005019368)	zgc:111976 (ENSLCRG00005019369)	FBXL7 (ENSLCRG00005019372)	ENSLCRG00005019373
European seabass	MODERN SPECIES	8	otos (ENSDLAG00005018272)	ENSDLAG00005034842	ENSDLAG00005031139	ENSDLAG00005009045	ENSDLAG00005021721	ARHGAP21 (ENSDLAG00005021698)	ENKUR (ENSDLAG00005027647)	THNSL1 (ENSDLAG00005021479)	ENSDLAG00005021472	GPR158 (ENSDLAG00005021414)	anxa13 (ENSDLAG00005021318)	myo3a (ENSDLAG00005021192)	gad2 (ENSDLAG00005020982)	apbb1ip (ENSDLAG00005020966)	ENSDLAG00005020934	pdss1 (ENSDLAG00005020867) ##22	abi1a (ENSDLAG00005020805)	acbd5a (ENSDLAG00005020860)	ENSDLAG00005002516	mastl (ENSDLAG00005020768)	YME1L1 (ENSDLAG00005020501)	ENSDLAG00005020479	ENSDLAG00005020462	RDH12 (ENSDLAG00005020447)	ca2 (ENSDLAG00005020435)	ENSDLAG00005027545	ENSDLAG00005020419	ENSDLAG00005020109	RALA (ENSDLAG00005027457)	zgc:111976 (ENSDLAG00005031816)	ENSDLAG00005020061
Gilthead seabream	MODERN SPECIES	10	and1 (ENSSAUG00010019405)	cops9 (ENSSAUG00010019403)	otos (ENSSAUG00010019400)	apodb (ENSSAUG00010019399)	ENSSAUG00010019398	ARHGAP21 (ENSSAUG00010019384)	ENSSAUG00010019377	enkur (ENSSAUG00010019375)	THNSL1 (ENSSAUG00010019373)	PTCHD3 (ENSSAUG00010019370)	GPR158 (ENSSAUG00010019367)	anxa13 (ENSSAUG00010019365)	myo3a (ENSSAUG00010019358)	gad2 (ENSSAUG00010016674)	ENSSAUG00010016604	pdss1 (ENSSAUG00010016594) ##22	abi1a (ENSSAUG00010016517)	acbd5a (ENSSAUG00010016510)	mastl (ENSSAUG00010016506)	YME1L1 (ENSSAUG00010015803)	ENSSAUG00010015741	fasn2 (ENSSAUG00010015737)	rdh12l (ENSSAUG00010015731)	ENSSAUG00010015727	ca2 (ENSSAUG00010015717)	ENSSAUG00010015711	ENSSAUG00010015683	ralaa (ENSSAUG00010015673)	zgc:111976 (ENSSAUG00010015669)	FBXL7 (ENSSAUG00010015667)	ENSSAUG00010015665
Percomorphaceae_D	ANCESTRAL SPECIES	21	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378
Anabantaria	ANCESTRAL SPECIES	22	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378
Zig-zag eel	MODERN SPECIES	12	ENSMAMG00000011687	and1 (ENSMAMG00000011655)	ENSMAMG00000011648	otos (ENSMAMG00000011643)	apodb (ENSMAMG00000011636)	ARHGAP21 (ENSMAMG00000011613)	ENSMAMG00000011604	enkur (ENSMAMG00000011594)	THNSL1 (ENSMAMG00000011588)	ENSMAMG00000011578	GPR158 (ENSMAMG00000011558)	anxa13 (ENSMAMG00000011536)	myo3a (ENSMAMG00000011459)	gad2 (ENSMAMG00000011415)	apbb1ip (ENSMAMG00000011402)	pdss1 (ENSMAMG00000011378) ##22	abi1a (ENSMAMG00000011306)	acbd5a (ENSMAMG00000011292)	mastl (ENSMAMG00000011280)	YME1L1 (ENSMAMG00000011243)	ENSMAMG00000011225	ENSMAMG00000011215	rdh12l (ENSMAMG00000011183)	ca2 (ENSMAMG00000011166)	ENSMAMG00000011156	ENSMAMG00000011137	ENSMAMG00000011120	ENSMAMG00000011113	ENSMAMG00000026127	ENSMAMG00000011079	ENSMAMG00000011058
Anabantoidei	ANCESTRAL SPECIES	20	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00760000120378
Siamese fighting fish	MODERN SPECIES	15	and1 (ENSBSLG00000014306)	cops9 (ENSBSLG00000014291)	otos (ENSBSLG00000014281)	apodb (ENSBSLG00000014069)	ENSBSLG00000014027	ARHGAP21 (ENSBSLG00000012945)	ENSBSLG00000012924	enkur (ENSBSLG00000012921)	THNSL1 (ENSBSLG00000012919)	PTCHD3 (ENSBSLG00000012913)	GPR158 (ENSBSLG00000012890)	anxa13 (ENSBSLG00000012815)	myo3a (ENSBSLG00000012733)	gad2 (ENSBSLG00000010823)	apbb1ip (ENSBSLG00000010547)	pdss1 (ENSBSLG00000010502) ##22	abi1a (ENSBSLG00000009898)	ENSBSLG00000009835	mastl (ENSBSLG00000009765)	YME1L1 (ENSBSLG00000009170)	ENSBSLG00000009093	fasn2 (ENSBSLG00000009080)	rdh12l (ENSBSLG00000009048)	ca2 (ENSBSLG00000009001)	ENSBSLG00000008971	ENSBSLG00000008932	ENSBSLG00000008486	ralaa (ENSBSLG00000008442)	zgc:111976 (ENSBSLG00000008406)	FBXL7 (ENSBSLG00000008384)	ENSBSLG00000008356
Climbing perch	MODERN SPECIES	11	cops9 (ENSATEG00000023075)	otos (ENSATEG00000029162)	apodb (ENSATEG00000030173)	ARHGAP21 (ENSATEG00000023102)	ENSATEG00000025689	ENSATEG00000023159	enkur (ENSATEG00000023167)	THNSL1 (ENSATEG00000023183)	ENSATEG00000023190	GPR158 (ENSATEG00000023199)	anxa13 (ENSATEG00000023208)	ENSATEG00000027086	myo3a (ENSATEG00000023219)	gad2 (ENSATEG00000023232)	apbb1ip (ENSATEG00000023247)	pdss1 (ENSATEG00000023258) ##22	abi1a (ENSATEG00000023271)	acbd5a (ENSATEG00000023279)	mastl (ENSATEG00000023293)	YME1L1 (ENSATEG00000023300)	ENSATEG00000023320	ENSATEG00000023328	rdh12l (ENSATEG00000023335)	ca2 (ENSATEG00000023344)	ENSATEG00000029809	ENSATEG00000025833	ENSATEG00000023372	ralaa (ENSATEG00000023391)	zgc:111976 (ENSATEG00000023426)	ENSATEG00000025214	ENSATEG00000027197
Carangaria	ANCESTRAL SPECIES	21	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e
Carangaria_A	ANCESTRAL SPECIES	15	ENSGT01100000263502.A.a.a.b.a.a	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00390000017291.a.e
Seriola	ANCESTRAL SPECIES	27	ENSGT01100000263502.A.a.a.b.a.a	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00660000095569.c	ENSGT00940000158009.a	ENSGT00940000180269
Yellowtail amberjack	MODERN SPECIES	3211			ENSSLDG00000021357	apodb (ENSSLDG00000021348)	ARHGAP21 (ENSSLDG00000021299)	enkur (ENSSLDG00000021233)	THNSL1 (ENSSLDG00000021214)	PTCHD3 (ENSSLDG00000021175)	GPR158 (ENSSLDG00000021161)	anxa13 (ENSSLDG00000021140)	myo3a (ENSSLDG00000021094)	ENSSLDG00000021077	gad2 (ENSSLDG00000021046)	ENSSLDG00000021029	apbb1ip (ENSSLDG00000021011)	pdss1 (ENSSLDG00000020991) ##22	abi1a (ENSSLDG00000020913)	acbd5a (ENSSLDG00000020816)	mastl (ENSSLDG00000020782)	YME1L1 (ENSSLDG00000020720)	ENSSLDG00000020692	fasn2 (ENSSLDG00000020656)	rdh12l (ENSSLDG00000020647)	ca2 (ENSSLDG00000020643)	ENSSLDG00000020638	ENSSLDG00000020603	ENSSLDG00000020589	ralaa (ENSSLDG00000020576)	zgc:111976 (ENSSLDG00000020498)	FBXL7 (ENSSLDG00000020481)	ENSSLDG00000020471
Greater amberjack	MODERN SPECIES	57	ENSSDUG00000008534	ENSSDUG00000008506	ENSSDUG00000008451	apodb (ENSSDUG00000008429)	ARHGAP21 (ENSSDUG00000008408)	enkur (ENSSDUG00000008394)	ENSSDUG00000008352	THNSL1 (ENSSDUG00000008344)	PTCHD3 (ENSSDUG00000008326)	GPR158 (ENSSDUG00000008269)	anxa13 (ENSSDUG00000008229)	myo3a (ENSSDUG00000008059)	gad2 (ENSSDUG00000008029)	ENSSDUG00000008015	apbb1ip (ENSSDUG00000007998)	pdss1 (ENSSDUG00000007966) ##22	abi1a (ENSSDUG00000007914)	acbd5a (ENSSDUG00000007891)	mastl (ENSSDUG00000007873)	YME1L1 (ENSSDUG00000007797)	ENSSDUG00000007767	fasn2 (ENSSDUG00000007722)	rdh12l (ENSSDUG00000007679)	ca2 (ENSSDUG00000007654)	ENSSDUG00000007625	ENSSDUG00000007587	ENSSDUG00000007565	ralaa (ENSSDUG00000007547)	zgc:111976 (ENSSDUG00000007527)	FBXL7 (ENSSDUG00000007498)	ENSSDUG00000007483
Barramundi perch	MODERN SPECIES	146				nrbp2b (ENSLCAG00010013468)	puf60b (ENSLCAG00010013544)	scrib (ENSLCAG00010013691)	ENSLCAG00010013763	ARHGAP21 (ENSLCAG00010013765)	ENSLCAG00010013769	THNSL1 (ENSLCAG00010013785)	GPR158 (ENSLCAG00010013804)	anxa13 (ENSLCAG00010013816)	myo3a (ENSLCAG00010013875)	gad2 (ENSLCAG00010013936)	apbb1ip (ENSLCAG00010014198)	pdss1 (ENSLCAG00010014229) ##22	abi1a (ENSLCAG00010014265)	acbd5a (ENSLCAG00010014319)	mastl (ENSLCAG00010014322)	YME1L1 (ENSLCAG00010014351)	ENSLCAG00010014372	fasn2 (ENSLCAG00010014374)	rdh12l (ENSLCAG00010014377)	ca2 (ENSLCAG00010014379)	ENSLCAG00010014383	ENSLCAG00010014384	zgc:111976 (ENSLCAG00010014387)	ENSLCAG00010014402	ralaa (ENSLCAG00010014430)	FBXL7 (ENSLCAG00010014435)	ENSLCAG00010014438
Pleuronectoidei	ANCESTRAL SPECIES	12	ENSGT01100000263502.A.a.a.b.a.a	ENSGT00500000045505.b	ENSGT00390000000076	ENSGT00390000011600	ENSGT00510000046981.b.a.d	ENSGT00940000155406.g	ENSGT00940000164792.a	ENSGT00940000153866.A.l	ENSGT00940000161144	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000164060.n	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000156907.p.a.b	ENSGT00940000157852	ENSGT00940000155142	ENSGT00940000158009.a	ENSGT00390000017291.a.e
Turbot	MODERN SPECIES	13	ENSSMAG00000026278	ENSSMAG00000006613	and1 (ENSSMAG00000006600)	cops9 (ENSSMAG00000023759)	apodb (ENSSMAG00000006569)	ARHGAP21 (ENSSMAG00000006316)	ENSSMAG00000006278	enkur (ENSSMAG00000006261)	THNSL1 (ENSSMAG00000006248)	GPR158 (ENSSMAG00000031599)	anxa13 (ENSSMAG00000006183)	myo3a (ENSSMAG00000006089)	gad2 (ENSSMAG00000006030)	apbb1ip (ENSSMAG00000005978)	ENSSMAG00000005952	pdss1 (ENSSMAG00000005910) ##22	abi1a (ENSSMAG00000005852)	ENSSMAG00000022033	mastl (ENSSMAG00000005809)	YME1L1 (ENSSMAG00000005747)	ENSSMAG00000005730	ENSSMAG00000005717	rdh12l (ENSSMAG00000005643)	ca2 (ENSSMAG00000005625)	ENSSMAG00000005622	ENSSMAG00000028004	ENSSMAG00000029018	ENSSMAG00000029983	ENSSMAG00000005549	ENSSMAG00000005539	ENSSMAG00000005529
Tongue sole	MODERN SPECIES	13	and1 (ENSCSEG00000018848)	cops9 (ENSCSEG00000018852)	otos (ENSCSEG00000018868)	apodb (ENSCSEG00000018875)	ARHGAP21 (ENSCSEG00000018885)	ENSCSEG00000018925	enkur (ENSCSEG00000018935)	THNSL1 (ENSCSEG00000018942)	GPR158 (ENSCSEG00000019243)	anxa13 (ENSCSEG00000019246)	myo3a (ENSCSEG00000019252)	gad2 (ENSCSEG00000019259)	ENSCSEG00000019273	apbb1ip (ENSCSEG00000019276)	ENSCSEG00000019299	pdss1 (ENSCSEG00000019313) ##22	abi1a (ENSCSEG00000019320)	acbd5a (ENSCSEG00000019337)	mastl (ENSCSEG00000019360)	YME1L1 (ENSCSEG00000019373)	ENSCSEG00000019389	fasn2 (ENSCSEG00000019391)	rdh12l (ENSCSEG00000019394)	ENSCSEG00000019399	ENSCSEG00000019405	ENSCSEG00000019406	zgc:111976 (ENSCSEG00000019408)	ENSCSEG00000019412	ralaa (ENSCSEG00000019417)	FBXL7 (ENSCSEG00000019422)	ENSCSEG00000019424
Tiger tail seahorse	MODERN SPECIES	384						ENSHCOG00000012154	ssr1 (ENSHCOG00000012162)	ENSHCOG00000012172	ENSHCOG00000012190	ENSHCOG00000012216	chrnd (ENSHCOG00000012272)	cip2a (ENSHCOG00000012296)	ENSHCOG00000012313	apbb1ip (ENSHCOG00000012368)	ENSHCOG00000012425	pdss1 (ENSHCOG00000012460) ##22	abi1a (ENSHCOG00000012511)	acbd5a (ENSHCOG00000012523)	mastl (ENSHCOG00000012560)	YME1L1 (ENSHCOG00000012612)	ENSHCOG00000012651	fasn2 (ENSHCOG00000012688)
Pinecone sodierfish	MODERN SPECIES	12	CDH6 (ENSMMDG00005007163)	drosha (ENSMMDG00005007897)	avl9 (ENSMMDG00005011626)	kbtbd2 (ENSMMDG00005011631)	ENSMMDG00005011632	ENSMMDG00005011634	RNF152 (ENSMMDG00005011635)	CDH20 (ENSMMDG00005011658)	mc4r (ENSMMDG00005012242)	ENSMMDG00005012245	anxa13 (ENSMMDG00005012249)	myo3a (ENSMMDG00005012261)	gad2 (ENSMMDG00005012270)	apbb1ip (ENSMMDG00005012290)	ENSMMDG00005012296	pdss1 (ENSMMDG00005012300) ##22	abi1a (ENSMMDG00005012388)	acbd5a (ENSMMDG00005012433)	mastl (ENSMMDG00005012439)	YME1L1 (ENSMMDG00005012489)	ENSMMDG00005015766	PTCHD3 (ENSMMDG00005015767)	fasn2 (ENSMMDG00005015769)	rdh12l (ENSMMDG00005015772)	ca2 (ENSMMDG00005015780)	ENSMMDG00005015790	ENSMMDG00005015792	RALYL (ENSMMDG00005015793)	ENSMMDG00005015795	ralaa (ENSMMDG00005015949)	zgc:111976 (ENSMMDG00005015954)
Cod	MODERN SPECIES	15	ENSGMOG00000006170	ENSGMOG00000010835	ENSGMOG00000026556	ENSGMOG00000031558	ENSGMOG00000034720	ENSGMOG00000031714	ENSGMOG00000006161	ENSGMOG00000030001	ENSGMOG00000033607	ENSGMOG00000026890	ENSGMOG00000032141	ENSGMOG00000037078	ENSGMOG00000032671	ENSGMOG00000018147	ENSGMOG00000024403	pdss1 (ENSGMOG00000018133) ##22	abi1a (ENSGMOG00000028127)	acbd5a (ENSGMOG00000018098)	mastl (ENSGMOG00000018075)	YME1L1 (ENSGMOG00000036384)	ENSGMOG00000026032	ENSGMOG00000036022	ENSGMOG00000024522	rdh12l (ENSGMOG00000018017)	ENSGMOG00000036829	ENSGMOG00000015756	ENSGMOG00000027268	ENSGMOG00000036068	ENSGMOG00000014617	ENSGMOG00000031702	ENSGMOG00000031034
Protacanthopterygii	ANCESTRAL SPECIES	165						ENSGT01080000257410.B.a.a.a.j	ENSGT00940000157544	ENSGT00390000005870	ENSGT00940000155894	ENSGT00950000183098.b.a.b	ENSGT00390000001455	ENSGT00390000010255	ENSGT00940000156069	ENSGT01020000231026	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.a.b	ENSGT00940000154811.B.a.a.a.a	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000166120	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n.q	ENSGT00940000158727.a.g	ENSGT00940000164060.n.r	ENSGT00940000158727.a.h
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	43			ENSGT00940000156105.k.a	ENSGT01080000257410.B.a.a.a.j	ENSGT00940000157544.i.a	ENSGT00390000005870.c	ENSGT00940000163496.a.v.a.a	ENSGT00940000155894	ENSGT00950000183098.b.a.b.nb	ENSGT00950000183098.b.a.b.mb	ENSGT00390000001455	ENSGT00390000010255.m.b	ENSGT00940000156069.t	ENSGT01020000231026.b	ENSGT00390000005508.b	ENSGT00940000153498.B.a.k ##22	ENSGT00940000154811.B.a.a.a.a	ENSGT00940000154811.B.b	ENSGT00940000156350.h.g	ENSGT00940000157002.a	ENSGT00550000074836.p.c	ENSGT00940000164060.m	ENSGT00940000164060.n.r.b	ENSGT00940000166120.e	ENSGT00940000154486.a.b.a.b.c	ENSGT00390000017728	ENSGT00940000154835.C.fb.a.a	ENSGT00520000055637.B.g.a	ENSGT00940000153769.B	ENSGT01090000260052.b.b.b	ENSGT00940000160556.c
Salmoninae_a	ANCESTRAL SPECIES	35	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000157881	ENSGT00940000156105.k.a	ENSGT01080000257410.B.a.a.a.j	ENSGT00940000157544.i.a	ENSGT00390000005870.c	ENSGT00940000155894	ENSGT00950000183098.b.a.b.nb	ENSGT00950000183098.b.a.b.mb	ENSGT00390000001455	ENSGT00390000010255.m.b	ENSGT00940000156069.t	ENSGT01020000231026.b	ENSGT00390000005508.b	ENSGT00940000153498.B.a.k ##22	ENSGT00940000154811.B.a.a.a.a	ENSGT00940000156350.h.g	ENSGT00940000157002.a	ENSGT00550000074836.p.c	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n.q.a	ENSGT00940000158727.a.g	ENSGT00940000164060.n.r.b	ENSGT00940000166120.e	ENSGT00940000154486.a.b.a.b.c	ENSGT00390000017728	ENSGT00940000154835.C.fb.a.a	ENSGT00520000055637.B.g.a	ENSGT00940000153769.B
Oncorhynchus	ANCESTRAL SPECIES	27	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000157881	ENSGT00940000156105.k.a	ENSGT01080000257410.B.a.a.a.j	ENSGT00940000157544.i.a	ENSGT00390000005870.c	ENSGT00940000155894	ENSGT00950000183098.b.a.b.nb	ENSGT00950000183098.b.a.b.mb	ENSGT00390000001455	ENSGT00390000010255.m.b	ENSGT00940000156069.t	ENSGT01020000231026.b	ENSGT00390000005508.b	ENSGT00940000153498.B.a.k ##22	ENSGT00940000154811.B.a.a.a.a	ENSGT00940000156350.h.g	ENSGT00940000157002.a	ENSGT00550000074836.p.c	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n.q.a	ENSGT00940000158727.a.g	ENSGT00940000164060.n.r.b	ENSGT00940000166120.e	ENSGT00940000154486.a.b.a.b.c	ENSGT00390000017728	ENSGT00940000154835.C.fb.a.a	ENSGT00520000055637.B.g.a	ENSGT00940000153769.B
Rainbow trout	MODERN SPECIES	6	APBB1IP (ENSOMYG00000034065)	SLCO5A1 (ENSOMYG00000034023)	sulf1 (ENSOMYG00000033990)	ENSOMYG00000033967	ENSOMYG00000033953	C8orf34 (ENSOMYG00000033930)	PREX2 (ENSOMYG00000030838)	ENSOMYG00000028655	ENSOMYG00000029992	ENSOMYG00000029972	ENSOMYG00000029202	ENSOMYG00000034762	ENSOMYG00000028795	ENSOMYG00000073742	ENSOMYG00000028762	pdss1 (ENSOMYG00000028717) ##22	ENSOMYG00000071172	abi1a (ENSOMYG00000028428)	acbd5a (ENSOMYG00000028269)	mastl (ENSOMYG00000028205)	YME1L1 (ENSOMYG00000023748)	ENSOMYG00000022847	ENSOMYG00000022823	ENSOMYG00000022816	ENSOMYG00000022796	ENSOMYG00000022765	ENSOMYG00000022751	ENSOMYG00000022733	ENSOMYG00000022713	ENSOMYG00000022697	ENSOMYG00000022676
Oncorhynchus_a	ANCESTRAL SPECIES	27	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000157881	ENSGT00940000156105.k.a	ENSGT01080000257410.B.a.a.a.j	ENSGT00940000157544.i.a	ENSGT00390000005870.c	ENSGT00940000155894.v	ENSGT00940000155894.u	ENSGT00950000183098.b.a.b.nb	ENSGT00390000001455	ENSGT00390000010255.m.b	ENSGT00940000156069.t	ENSGT01020000231026.b	ENSGT00390000005508.b	ENSGT00940000153498.B.a.k ##22	ENSGT00940000154811.B.a.a.a.a	ENSGT00940000156350.h.g	ENSGT00940000157002.a	ENSGT00550000074836.p.c	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000158727.a.g	ENSGT00940000164060.n.r.b	ENSGT00940000166120.e	ENSGT00940000154486.a.b.a.b.c	ENSGT00390000017728	ENSGT00940000154835.C.fb.a.a	ENSGT00520000055637.B.g.a	ENSGT00940000153769.B	ENSGT01090000260052.b.b.b
Coho salmon	MODERN SPECIES	2	nle1 (ENSOKIG00005009177)	apbb1ip (ENSOKIG00005009782)	ENSOKIG00005009838	ENSOKIG00005009844	SLCO5A1 (ENSOKIG00005009852)	sulf1 (ENSOKIG00005009910)	zgc:162928 (ENSOKIG00005010516)	ENSOKIG00005010526	PREX2 (ENSOKIG00005010628)	psme2 (ENSOKIG00005011426)	lsm5 (ENSOKIG00005011448)	AVL9 (ENSOKIG00005011557)	kbtbd2 (ENSOKIG00005012745)	ENSOKIG00005012762	ENSOKIG00005012794	pdss1 (ENSOKIG00005012812) ##22	abi1a (ENSOKIG00005012882)	acbd5a (ENSOKIG00005013018)	mastl (ENSOKIG00005013047)	YME1L1 (ENSOKIG00005013252)	ENSOKIG00005017442	PTCHD3 (ENSOKIG00005017447)	PTCHD3 (ENSOKIG00005017456)	fasn2 (ENSOKIG00005017467)	ENSOKIG00005017480	ENSOKIG00005017491	pigm (ENSOKIG00005017505)	serpinb1l3 (ENSOKIG00005017516)	ENSOKIG00005017528	ENSOKIG00005017543	ENSOKIG00005017550
Chinook salmon	MODERN SPECIES	21	anxa13 (ENSOTSG00005044773)	myo3a (ENSOTSG00005044733)	gad2 (ENSOTSG00005044451)	nle1 (ENSOTSG00005044425)	apbb1ip (ENSOTSG00005044422)	SLCO5A1 (ENSOTSG00005044421)	sulf1 (ENSOTSG00005043551)	zgc:162928 (ENSOTSG00005043539)	PREX2 (ENSOTSG00005043529)	psme2 (ENSOTSG00005043528)	LSM5 (ENSOTSG00005043527)	avl9 (ENSOTSG00005043497)	kbtbd2 (ENSOTSG00005043491)	ENSOTSG00005043490	ENSOTSG00005043488	pdss1 (ENSOTSG00005043487) ##22	abi1a (ENSOTSG00005043368)	acbd5a (ENSOTSG00005043366)	mastl (ENSOTSG00005043365)	YME1L1 (ENSOTSG00005039513)	ENSOTSG00005039493	PTCHD3 (ENSOTSG00005039490)	PTCHD3 (ENSOTSG00005039483)	fasn2 (ENSOTSG00005039482)	ENSOTSG00005039478	ENSOTSG00005039477	pigm (ENSOTSG00005039476)	serpinb1l3 (ENSOTSG00005039474)	ENSOTSG00005039472	ENSOTSG00005039467	ENSOTSG00005039466
Salmo	ANCESTRAL SPECIES	34	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000157881	ENSGT00940000156105.k.a	ENSGT01080000257410.B.a.a.a.j	ENSGT00940000157544.i.a	ENSGT00390000005870.c	ENSGT00940000155894	ENSGT00950000183098.b.a.b.nb	ENSGT01010000225198	ENSGT00390000010255.m.b	ENSGT00940000156069.t	ENSGT01020000231026.b	ENSGT00390000005508.b	ENSGT00940000153498.B.a.k ##22	ENSGT00940000154811.B.a.a.a.a	ENSGT00940000156350.h.g	ENSGT00940000157002.a	ENSGT00550000074836.p.c	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n.q.a	ENSGT00940000158727.a.g.d	ENSGT00940000164060.n.r.b	ENSGT00940000166120.e	ENSGT00940000154486.a.b.a.b.c	ENSGT00390000017728	ENSGT00940000154835.C.fb.a.a	ENSGT00520000055637.B.g.a	ENSGT00940000153769.B
Atlantic salmon	MODERN SPECIES	21	APBB1IP (ENSSSAG00000072025)	SLCO5A1 (ENSSSAG00000072039)	sulf1 (ENSSSAG00000072136)	C8orf34 (ENSSSAG00000074965)	ENSSSAG00000121520	ENSSSAG00000014585	PREX2 (ENSSSAG00000075068)	ENSSSAG00000097786	ENSSSAG00000076936	ENSSSAG00000093212	LSM5 (ENSSSAG00000076939)	ENSSSAG00000076951	KBTBD2 (ENSSSAG00000077134)	ENSSSAG00000077145	ENSSSAG00000077164	pdss1 (ENSSSAG00000083441) ##22	abi1a (ENSSSAG00000077218)	acbd5a (ENSSSAG00000077282)	mastl (ENSSSAG00000077287)	YME1L1 (ENSSSAG00000077345)	ENSSSAG00000077837	ENSSSAG00000077848	ENSSSAG00000077857	ENSSSAG00000093780	ENSSSAG00000111562	ENSSSAG00000077866	rdh12 (ENSSSAG00000077873)	ENSSSAG00000077889	ENSSSAG00000106257	ENSSSAG00000110656	ENSSSAG00000077911
River trout	MODERN SPECIES	36	apbb1ip (ENSSTUG00000013024)	SLCO5A1 (ENSSTUG00000012991)	sulf1 (ENSSTUG00000012427)	ENSSTUG00000012412	ENSSTUG00000012390	ENSSTUG00000012380	zgc:162928 (ENSSTUG00000012355)	PREX2 (ENSSTUG00000011391)	psme2 (ENSSTUG00000011330)	ENSSTUG00000011325	ENSSTUG00000011312	avl9 (ENSSTUG00000011193)	kbtbd2 (ENSSTUG00000011174)	ENSSTUG00000011163	ENSSTUG00000011120	pdss1 (ENSSTUG00000011072) ##22	ENSSTUG00000010845	acbd5a (ENSSTUG00000010829)	mastl (ENSSTUG00000010725)	YME1L1 (ENSSTUG00000007533)	ENSSTUG00000007438	PTCHD3 (ENSSTUG00000007422)	fasn2 (ENSSTUG00000007414)	PTCHD3 (ENSSTUG00000007407)	fasn2 (ENSSTUG00000007382)	ENSSTUG00000007369	ENSSTUG00000007360	pigm (ENSSTUG00000007349)	serpinb1l3 (ENSSTUG00000007328)	ENSSTUG00000007312	ENSSTUG00000007299
Huchen	MODERN SPECIES	3192									ENSHHUG00000012233	psme2 (ENSHHUG00000012240)	avl9 (ENSHHUG00000012294)	kbtbd2 (ENSHHUG00000012341)	ENSHHUG00000012344	ENSHHUG00000012356	ENSHHUG00000012374	pdss1 (ENSHHUG00000012394) ##22	abi1a (ENSHHUG00000012406)
Salmoninae	ANCESTRAL SPECIES	718													ENSGT00390000010255.m.a	ENSGT00940000156069.s	ENSGT01020000231026.a	ENSGT00940000153498.B.a.l ##22	ENSGT00940000154811.B.a.a.a.b	ENSGT00940000176171	ENSGT00940000156350.h.h	ENSGT00940000157002.b	ENSGT00550000074836.p.d	ENSGT00940000164060.n.q.b	ENSGT00940000158727.a.h.b
Salmoninae_a	ANCESTRAL SPECIES	32	ENSGT00940000154977	ENSGT00940000157063.a.a.d.a	ENSGT00950000182878.b.a.k	ENSGT00940000155268	ENSGT00940000161902.a.b.a	ENSGT00940000156118.d.b.d	ENSGT00940000160438.d.b	ENSGT00950000182978.A.a.b.a.c.b.a.b	ENSGT01090000260093.a.d	ENSGT00510000046470.a.a.a.g	ENSGT00950000183021.a.a.a.a.i.b	ENSGT00940000159454.j	ENSGT00390000010255.m.a	ENSGT00940000156069.s	ENSGT01020000231026.a	ENSGT00940000153498.B.a.l ##22	ENSGT00940000154811.B.a.a.a.b	ENSGT00940000156350.h.h	ENSGT00940000157002.b	ENSGT00550000074836.p.d	ENSGT00940000164060.n.q.b	ENSGT00940000166120.f	ENSGT00940000158727.a.h.b	ENSGT00940000154486.a.b.a.b.d	ENSGT00940000154835.C.fb.a.b	ENSGT00520000055637.B.g.b.a	ENSGT00520000055637.B.g.b.b	ENSGT00940000160556.d	ENSGT00940000154014.a.i.a	ENSGT00390000015821.s.b	ENSGT00940000156394.o.a
Salmo	ANCESTRAL SPECIES	3	ENSGT00940000161902.a.b.a	ENSGT00940000156118.d.b.d	ENSGT00940000160438.d.b	ENSGT01010000230250.a	ENSGT00950000182978.A.a.b.a.d	ENSGT01090000260093.a.d	ENSGT00510000046470.a.a.a.g	ENSGT00950000183021.a.a.a.a.i.b	ENSGT00940000157544.i.b	ENSGT00390000005870.d	ENSGT00950000183098.b.a.b.mb	ENSGT00390000001455	ENSGT00390000010255.m.a	ENSGT00940000156069.s	ENSGT01020000231026.a	ENSGT00940000153498.B.a.l ##22	ENSGT00940000154811.B.a.a.a.b	ENSGT00940000156350.h.h	ENSGT00940000157002.b	ENSGT00550000074836.p.d	ENSGT00940000158727.a.h.a	ENSGT00940000164060.n.r.a	ENSGT00940000164060.n.q.b	ENSGT00940000158727.a.h.b	ENSGT00940000154486.a.b.a.b.d	ENSGT00940000154835.C.fb.a.b	ENSGT00520000055637.B.g.b.a	ENSGT00520000055637.B.g.b.b	ENSGT00940000160556.d	ENSGT00940000154014.a.i.a	ENSGT00940000156394.o.a
River trout	MODERN SPECIES	11	ENSSTUG00000020787	ENSSTUG00000020794	trpa1b (ENSSTUG00000020928)	MSC (ENSSTUG00000025475)	ENSSTUG00000025484	ENSSTUG00000025501	ENSSTUG00000025512	xkr9 (ENSSTUG00000025524)	tram1 (ENSSTUG00000025534)	ncoa2 (ENSSTUG00000025581)	psme2 (ENSSTUG00000025598)	lsm5 (ENSSTUG00000025611)	avl9 (ENSSTUG00000025653)	kbtbd2 (ENSSTUG00000025842)	ENSSTUG00000025865	pdss1 (ENSSTUG00000025889) ##22	abi1a (ENSSTUG00000025956)	acbd5a (ENSSTUG00000026222)	mastl (ENSSTUG00000026260)	YME1L1 (ENSSTUG00000026477)	PTCHD3 (ENSSTUG00000030660)	ENSSTUG00000030668	fasn2 (ENSSTUG00000030679)	PTCHD3 (ENSSTUG00000030683)	ENSSTUG00000030685	ENSSTUG00000030699	ENSSTUG00000030709	ENSSTUG00000030727	vstm2a (ENSSTUG00000000084)	stk17a (ENSSTUG00000000087)	tgfbr1b (ENSSTUG00000000093)
Atlantic salmon	MODERN SPECIES	10	eya1 (ENSSSAG00000009645)	xkr9 (ENSSSAG00000015391)	tram1 (ENSSSAG00000015450)	ENSSSAG00000117409	ncoa2 (ENSSSAG00000018217)	prdm14 (ENSSSAG00000019241)	ENSSSAG00000094302	SULF1 (ENSSSAG00000008807)	ENSSSAG00000091207	ENSSSAG00000117993	ENSSSAG00000008622	lsm5 (ENSSSAG00000008611)	ENSSSAG00000095770	ENSSSAG00000007168	ENSSSAG00000007061	pdss1 (ENSSSAG00000007037) ##22	abi1a (ENSSSAG00000006951)	ENSSSAG00000100268	acbd5a (ENSSSAG00000006935)	mastl (ENSSSAG00000006932)	YME1L1 (ENSSSAG00000006453)	PTCHD3 (ENSSSAG00000006395)	ENSSSAG00000006380	ENSSSAG00000090282	ENSSSAG00000101078	ENSSSAG00000083573	ENSSSAG00000077899	ENSSSAG00000108963	ENSSSAG00000006284	ENSSSAG00000006168	ENSSSAG00000099202
Oncorhynchus	ANCESTRAL SPECIES	28	ENSGT00940000154977	ENSGT00940000157063.a.a.d.a	ENSGT00950000182878.b.a.k	ENSGT00940000155268	ENSGT00940000161902.a.b.a	ENSGT00940000156118.d.b.d	ENSGT00940000160438.d.b	ENSGT00950000182978.A.a.b.a.c.b.a.b	ENSGT01090000260093.a.d	ENSGT00510000046470.a.a.a.g	ENSGT00950000183021.a.a.a.a.i.b	ENSGT00940000159454.j	ENSGT00390000010255.m.a	ENSGT00940000156069.s	ENSGT01020000231026.a	ENSGT00940000153498.B.a.l ##22	ENSGT00940000154811.B.a.a.a.b	ENSGT00940000156350.h.h	ENSGT00940000157002.b	ENSGT00550000074836.p.d	ENSGT00940000164060.n.q.b	ENSGT00940000166120.f	ENSGT00940000158727.a.h.b	ENSGT00940000154486.a.b.a.b.d	ENSGT00940000154835.C.fb.a.b	ENSGT00520000055637.B.g.b.a	ENSGT00940000160556.d	ENSGT00940000154014.a.i.a	ENSGT00390000015821.s.b	ENSGT00940000156394.o.a	ENSGT00390000018540.g
Oncorhynchus_a	ANCESTRAL SPECIES	23	ENSGT00940000157063.a.a.d.a	ENSGT00950000182878.b.a.k	ENSGT00940000155268	ENSGT00940000161902.a.b.a	ENSGT00940000156118.d.b.d	ENSGT00940000160438.d.b	ENSGT01010000230250	ENSGT00950000182978.A.a.b.a.c.b.a.b	ENSGT01090000260093.a.d	ENSGT00510000046470.a.a.a.g	ENSGT00950000183021.a.a.a.a.i.b	ENSGT00940000159454.j	ENSGT00390000010255.m.a	ENSGT00940000156069.s	ENSGT01020000231026.a	ENSGT00940000153498.B.a.l ##22	ENSGT00940000154811.B.a.a.a.b	ENSGT00940000156350.h.h	ENSGT00940000157002.b	ENSGT00550000074836.p.d	ENSGT00940000164060.n.q.b	ENSGT00940000166120.f	ENSGT00940000158727.a.h.b	ENSGT00940000154486.a.b.a.b.d	ENSGT00940000154835.C.fb.a.b	ENSGT00520000055637.B.g.b.a	ENSGT00520000055637.B.g.b.b	ENSGT00940000160556.d	ENSGT00940000154014.a.i.a	ENSGT00390000015821.s.b	ENSGT00940000156394.o.a
Chinook salmon	MODERN SPECIES	299												lsm5 (ENSOTSG00005026280)	avl9 (ENSOTSG00005026278)	kbtbd2 (ENSOTSG00005026276)	ENSOTSG00005026273	pdss1 (ENSOTSG00005026247) ##22	ENSOTSG00005026246	ndufs4 (ENSOTSG00005030248)
Coho salmon	MODERN SPECIES	9	xkr9 (ENSOKIG00005033169)	tram1 (ENSOKIG00005032483)	ENSOKIG00005032077	ncoa2 (ENSOKIG00005031884)	prdm14 (ENSOKIG00005031793)	ENSOKIG00005031751	SULF1 (ENSOKIG00005029935)	ENSOKIG00005029222	C8orf34 (ENSOKIG00005029089)	ENSOKIG00005028962	ENSOKIG00005028839	LSM5 (ENSOKIG00005028751)	AVL9 (ENSOKIG00005026088)	KBTBD2 (ENSOKIG00005024985)	ENSOKIG00005024855	pdss1 (ENSOKIG00005024397) ##22	abi1a (ENSOKIG00005022365)	acbd5a (ENSOKIG00005021560)	mastl (ENSOKIG00005021155)	YME1L1 (ENSOKIG00005013717)	ENSOKIG00005010836	rdh12l (ENSOKIG00005010762)	PTCHD3 (ENSOKIG00005010711)	ENSOKIG00005010589	ENSOKIG00005010513	ENSOKIG00005010456	ENSOKIG00005010293	ENSOKIG00005010199	ENSOKIG00005010159	VSTM2A (ENSOKIG00005010081)	ENSOKIG00005010035
Rainbow trout	MODERN SPECIES	2	tram1 (ENSOMYG00000008243)	ncoa2 (ENSOMYG00000076706)	ENSOMYG00000068274	prdm14 (ENSOMYG00000030629)	ENSOMYG00000062211	SULF1 (ENSOMYG00000069471)	ENSOMYG00000054692	C8orf34 (ENSOMYG00000057241)	ENSOMYG00000030685	LSM5 (ENSOMYG00000030702)	ENSOMYG00000030721	ENSOMYG00000073426	ENSOMYG00000075701	KBTBD2 (ENSOMYG00000030759)	ENSOMYG00000030800	pdss1 (ENSOMYG00000030738) ##22	ENSOMYG00000030983	ENSOMYG00000062627	ENSOMYG00000065736	acbd5a (ENSOMYG00000031961)	ENSOMYG00000032023	YME1L1 (ENSOMYG00000032189)	ENSOMYG00000033102	ENSOMYG00000033109	ENSOMYG00000065180	ENSOMYG00000033136	ENSOMYG00000033165	ENSOMYG00000048358	ENSOMYG00000033170	ENSOMYG00000033183	ENSOMYG00000033192
Huchen	MODERN SPECIES	1821												psme2 (ENSHHUG00000020281)	lsm5 (ENSHHUG00000020253)	ENSHHUG00000020250	kbtbd2 (ENSHHUG00000020246)	pdss1 (ENSHHUG00000020242) ##22	abi1a (ENSHHUG00000020235)
Northern pike	MODERN SPECIES	20	SBSPON (ENSELUG00000007601)	SLCO5A1 (ENSELUG00000007623)	sulf1 (ENSELUG00000007662)	zgc:162928 (ENSELUG00000007690)	PREX2 (ENSELUG00000007745)	ENSELUG00000007712	psme2 (ENSELUG00000031809)	lsm5 (ENSELUG00000007792)	avl9 (ENSELUG00000007927)	kbtbd2 (ENSELUG00000007954)	ENSELUG00000007997	GAL3ST3 (ENSELUG00000008055)	ENSELUG00000008050	GAL3ST3 (ENSELUG00000008031)	ENSELUG00000008080	pdss1 (ENSELUG00000008105) ##22	abi1a (ENSELUG00000008127)	acbd5a (ENSELUG00000008143)	mastl (ENSELUG00000008167)	YME1L1 (ENSELUG00000008211)	ENSELUG00000008236	PTCHD3 (ENSELUG00000008243)	PTCHD3 (ENSELUG00000008256)	fasn2 (ENSELUG00000008267)	ENSELUG00000008280	fasn2 (ENSELUG00000008426)	PTCHD3 (ENSELUG00000001425)	rdh12l (ENSELUG00000008475)	ENSELUG00000008329	ENSELUG00000029191	ENSELUG00000008392
Otomorpha	ANCESTRAL SPECIES	115	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280.a.b	ENSGT00940000161144	ENSGT00940000153866.A	ENSGT00940000164792.a	ENSGT00940000155406.g	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n	ENSGT00940000158727.a	ENSGT00940000166120	ENSGT00940000167726	ENSGT00390000015564	ENSGT00940000164239.b.b	ENSGT00940000164184	ENSGT00940000156227.f	ENSGT00940000156625
Otophysi	ANCESTRAL SPECIES	175	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280.a.b	ENSGT00940000161144	ENSGT00940000153866.A	ENSGT00940000164792.a	ENSGT00940000155406.g	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00940000157649	ENSGT01060000248594.f	ENSGT00940000161292	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000165699.B	ENSGT00940000154200.B	ENSGT00940000160269.f	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000157819	ENSGT00940000154674.q.b	ENSGT00940000156929
Characiphysae	ANCESTRAL SPECIES	52	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000156280.a.b.b	ENSGT00940000158304	ENSGT00390000020445	ENSGT00940000166821.a	ENSGT00940000155281	ENSGT00940000158227	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939.g	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00940000157649	ENSGT01060000248594.f	ENSGT00940000161292	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000165699.B	ENSGT00940000154200.B	ENSGT00940000160269.f	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000157819	ENSGT00940000154674.q.b	ENSGT00940000156929
Channel catfish	MODERN SPECIES		ENSIPUG00000002655	actr3b (ENSIPUG00000002616)	XRCC2 (ENSIPUG00000002601)	ENSIPUG00000002596	ENSIPUG00000002565	ENSIPUG00000002547	GALNT11 (ENSIPUG00000002489)	PTCHD3 (ENSIPUG00000002464)	GPR158 (ENSIPUG00000002451)	ENSIPUG00000002436	anxa13 (ENSIPUG00000002391)	myo3a (ENSIPUG00000002332)	gad2 (ENSIPUG00000002296)	apbb1ip (ENSIPUG00000002288)	ENSIPUG00000002267	pdss1 (ENSIPUG00000002251) ##22	Abi1a (ENSIPUG00000002199)	acbd5 (ENSIPUG00000002176)	mastl (ENSIPUG00000001191)	pcolce2b (ENSIPUG00000001172)	trpc1 (ENSIPUG00000001110)	Chst2 (ENSIPUG00000001106)	dipk2ab (ENSIPUG00000001104)	plod2 (ENSIPUG00000001033)	ENSIPUG00000001022	zic4 (ENSIPUG00000001012)	zic1 (ENSIPUG00000001002)	cpb1 (ENSIPUG00000000980)	gyg1b (ENSIPUG00000000927)	bdh1 (ENSIPUG00000000921)	nck1 (ENSIPUG00000000905)
Characiphysae_b	ANCESTRAL SPECIES	55	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000156280.a.b.b	ENSGT00940000158304	ENSGT00390000020445	ENSGT00940000155281	ENSGT00940000158227	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939.g	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00940000157649	ENSGT01060000248594.f	ENSGT00940000161292	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000165699.B	ENSGT00940000154200.B	ENSGT00940000160269.f	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000157819	ENSGT00940000154674.q.b	ENSGT00940000156929
Electric eel	MODERN SPECIES	290													ENSEEEG00000004082	gad2 (ENSEEEG00000004086)	apbb1ip (ENSEEEG00000004090)	pdss1 (ENSEEEG00000004094) ##22	abi1a (ENSEEEG00000004108)	acbd5a (ENSEEEG00000004115)	mastl (ENSEEEG00000004116)	pcolce2b (ENSEEEG00000004118)	trpc1 (ENSEEEG00000004121)	CHST2 (ENSEEEG00000004136)	dipk2ab (ENSEEEG00000004138)	plod2 (ENSEEEG00000004196)	ENSEEEG00000004962	zic4 (ENSEEEG00000004965)	zic1 (ENSEEEG00000004966)
Characoidei	ANCESTRAL SPECIES	46	ENSGT00940000164792.a	ENSGT00940000153866.A	ENSGT00940000161144	ENSGT00940000156280.a.b.b	ENSGT00940000158304	ENSGT00390000020445	ENSGT00940000155281	ENSGT00940000158227	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00940000155939.g	ENSGT00940000157951	ENSGT00810000125439.A	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00940000157649	ENSGT01060000248594.f	ENSGT00940000161292	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000165699.B	ENSGT00940000154200.B	ENSGT00940000160269.f	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000157819	ENSGT00940000154674.q.b	ENSGT00940000156929
Red-bellied piranha	MODERN SPECIES	4	enkur (ENSPNAG00000029398)	ENSPNAG00000005440	ENSPNAG00000029435	DPP6 (ENSPNAG00000029613)	actr3b (ENSPNAG00000029635)	XRCC2 (ENSPNAG00000029645)	ENSPNAG00000029657	GALNT11 (ENSPNAG00000029690)	GPR158 (ENSPNAG00000029706)	anxa13 (ENSPNAG00000029726)	myo3a (ENSPNAG00000029782)	gad2 (ENSPNAG00000029819)	ENSPNAG00000029828	apbb1ip (ENSPNAG00000029842)	ENSPNAG00000029861	pdss1 (ENSPNAG00000029883) ##22	ENSPNAG00000029897	abi1a (ENSPNAG00000029906)	acbd5a (ENSPNAG00000029918)	mastl (ENSPNAG00000005654)	pcolce2b (ENSPNAG00000004686)	trpc1 (ENSPNAG00000029958)	CHST2 (ENSPNAG00000029965)	ENSPNAG00000029971	dipk2ab (ENSPNAG00000029980)	plod2 (ENSPNAG00000030000)	ENSPNAG00000030005	zic4 (ENSPNAG00000030011)	zic1 (ENSPNAG00000030015)	AGTR1 (ENSPNAG00000030018)	cpb1 (ENSPNAG00000006587)
Mexicana tetra	MODERN SPECIES	807				XRCC2 (ENSAMXG00000035786)	ENSAMXG00000029640	ENSAMXG00000036494	GALNT11 (ENSAMXG00000006603)	GPR158 (ENSAMXG00000019869)	anxa13 (ENSAMXG00000038696)	myo3a (ENSAMXG00000030129)	ENSAMXG00000035323	gad2 (ENSAMXG00000031904)	ENSAMXG00000019135	apbb1ip (ENSAMXG00000029790)	ENSAMXG00000041126	pdss1 (ENSAMXG00000030487) ##22	abi1a (ENSAMXG00000036700)	acbd5a (ENSAMXG00000040216)	mastl (ENSAMXG00000015110)	pcolce2b (ENSAMXG00000015137)	trpc1 (ENSAMXG00000015165)	CHST2 (ENSAMXG00000024815)
Cyprinoidei	ANCESTRAL SPECIES	21	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280.a.b	ENSGT00940000161144	ENSGT00940000153866.A	ENSGT00940000164792.a	ENSGT00940000155406.g	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00940000157649	ENSGT01060000248594.f	ENSGT00950000182866.D.d.b.bb.b.a	ENSGT00940000161292	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000165699.B	ENSGT00940000154200.B.t	ENSGT00940000160269.f	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000157819	ENSGT00940000161191.A.a.a
Cyprininae	ANCESTRAL SPECIES	432						ENSGT00940000156280.a.b.d	ENSGT00940000161144.f	ENSGT00940000153866.A.o	ENSGT00940000164792.a	ENSGT00940000155406.g.a	ENSGT00940000155918.c.a.d	ENSGT00940000166789.a	ENSGT00940000155939.e.a	ENSGT00940000157951.r	ENSGT00940000156105.k.a.a	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.A.p	ENSGT00940000154811.B.a.a.b.e.b	ENSGT00940000156350.h.b	ENSGT00940000157002.c	ENSGT00940000157649.i.b	ENSGT01060000248594.f.c	ENSGT00950000182866.D.d.b.bb.b.a.b.a.a.b	ENSGT00940000161292.u.a	ENSGT00520000055625.b.l.b	ENSGT01030000234558.A.a.b.h	ENSGT00940000165699.B.c	ENSGT00940000154200.B.t.a.a	ENSGT00940000160269.f.a	ENSGT01050000244888.b.a.c.b.e.b	ENSGT00940000157819.o
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	340						ENSGT00940000156280.a.b.d	ENSGT00940000161144.f	ENSGT00940000153866.A.o	ENSGT00940000164792.a.a	ENSGT00940000155406.g.a	ENSGT00940000155918.c.a.d	ENSGT00940000166789.a	ENSGT00940000155939.e.a	ENSGT00940000157951.r	ENSGT00940000156105.k.a.a	ENSGT00940000153498.B.a.m ##22	ENSGT00940000154811.A.p	ENSGT00940000154811.B.a.a.b.e.b	ENSGT00940000156350.h.b	ENSGT00940000157002.c	ENSGT00940000157649.i.b	ENSGT01060000248594.f.c	ENSGT00950000182866.D.d.b.bb.b.a.a	ENSGT00940000161292.u.a	ENSGT00520000055625.b.l.b	ENSGT01030000234558.A.a.b.h	ENSGT00940000165699.B.c	ENSGT00940000154200.B.t.a.a	ENSGT00940000160269.f.a	ENSGT01050000244888.b.a.c.b.e.b	ENSGT00940000157819.o
Common carp reference	MODERN SPECIES	14	ENSCCRG00000053437	DPP6 (ENSCCRG00000072422)	enkur (ENSCCRG00000007337)	ENSCCRG00000007335	ARHGAP21 (ENSCCRG00000006385)	ENSCCRG00000080526	GPR158 (ENSCCRG00000022918)	ENSCCRG00000075312	ENSCCRG00000066907	ENSCCRG00000059774	anxa13 (ENSCCRG00000022852)	zgc:174877 (ENSCCRG00000042505)	myo3a (ENSCCRG00000005237)	gad2 (ENSCCRG00000020162)	apbb1ip (ENSCCRG00000029879)	pdss1 (ENSCCRG00000053373) ##22	abi1a (ENSCCRG00000077174)	acbd5a (ENSCCRG00000029917)	mastl (ENSCCRG00000002826)	pcolce2b (ENSCCRG00000031627)	trpc1 (ENSCCRG00000039652)	CHST2 (ENSCCRG00000062086)	ENSCCRG00000070984	dipk2ab (ENSCCRG00000022265)	ENSCCRG00000071284	ENSCCRG00000066935	plod2 (ENSCCRG00000011472)	ENSCCRG00000021986	zic4 (ENSCCRG00000061437)	zic1 (ENSCCRG00000053184)	AGTR1 (ENSCCRG00000044435)
Golden-line barbel	MODERN SPECIES	1629												myo3a (ENSSGRG00000002089)	gad2 (ENSSGRG00000002088)	ENSSGRG00000002087	apbb1ip (ENSSGRG00000002085)	pdss1 (ENSSGRG00000002083) ##22	ENSSGRG00000002080
Cyprininae_a	ANCESTRAL SPECIES	166	ENSGT00390000020445.f	ENSGT00940000158304.a	ENSGT00940000156280.a.b.c.a	ENSGT00940000161144.e	ENSGT00940000153866.A.p	ENSGT00940000164792.a.b	ENSGT00940000155406.g.b	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a.c	ENSGT00940000166789.b	ENSGT00390000013183.c	ENSGT00940000155939.f	ENSGT00940000157951.q	ENSGT00940000156105.k.a.b	ENSGT00390000005508.b	ENSGT00940000153498.B.a.n ##22	ENSGT00940000154811.B.a.a.b.e.a	ENSGT00940000156350.h.a.a	ENSGT00940000157002.d	ENSGT00940000157649.i.a	ENSGT01060000248594.f.d	ENSGT00950000182866.D.d.b.bb.b.a.b.b	ENSGT00940000161292.u.b	ENSGT00520000055625.b.l.a	ENSGT01030000234558.A.a.b.g.b	ENSGT00940000154200.B.t.b	ENSGT00940000154200.B.t.a.b	ENSGT00940000160269.f.b	ENSGT01050000244888.b.a.c.b.e.a	ENSGT00940000157819.p	ENSGT00940000161191.A.a.a
Common carp reference	MODERN SPECIES	40	XRCC2 (ENSCCRG00000031665)	actr3b (ENSCCRG00000045362)	DPP6 (ENSCCRG00000073297)	ENSCCRG00000074787	THNSL1 (ENSCCRG00000034535)	enkur (ENSCCRG00000034539)	ARHGAP21 (ENSCCRG00000024101)	ENSCCRG00000025243	GPR158 (ENSCCRG00000028801)	anxa13 (ENSCCRG00000042382)	zgc:174877 (ENSCCRG00000022835)	myo3a (ENSCCRG00000019857)	gad2 (ENSCCRG00000004640)	ENSCCRG00000068949	apbb1ip (ENSCCRG00000073219)	pdss1 (ENSCCRG00000063907) ##22	abi1a (ENSCCRG00000029926)	acbd5a (ENSCCRG00000037855)	mastl (ENSCCRG00000029910)	pcolce2b (ENSCCRG00000039657)	trpc1 (ENSCCRG00000031641)	ENSCCRG00000052933	ENSCCRG00000016954	ENSCCRG00000081742	ENSCCRG00000006150	ENSCCRG00000069416	ENSCCRG00000017382	dipk2ab (ENSCCRG00000057972)	ENSCCRG00000057039	ENSCCRG00000053427	plod2 (ENSCCRG00000002279)
Golden-line barbel	MODERN SPECIES	97						DPP6 (ENSSGRG00000024326)	THNSL1 (ENSSGRG00000024328)	enkur (ENSSGRG00000024330)	ENSSGRG00000024332	ARHGAP21 (ENSSGRG00000024356)	GPR158 (ENSSGRG00000026059)	anxa13 (ENSSGRG00000026094)	myo3a (ENSSGRG00000026356)	apbb1ip (ENSSGRG00000027811)	ENSSGRG00000027813	pdss1 (ENSSGRG00000027815) ##22	abi1a (ENSSGRG00000027868)	acbd5a (ENSSGRG00000028742)	mastl (ENSSGRG00000028743)	pcolce2b (ENSSGRG00000028744)	trpc1 (ENSSGRG00000028759)	ENSSGRG00000029166	CHST2 (ENSSGRG00000029167)	ENSSGRG00000029169	dipk2ab (ENSSGRG00000029170)	plod2 (ENSSGRG00000029256)	zic4 (ENSSGRG00000032286)	zic1 (ENSSGRG00000032287)	cpb1 (ENSSGRG00000032288)	fzd8a (ENSSGRG00000032289)	CCNY (ENSSGRG00000032291)
Goldfish	MODERN SPECIES	43	MTRR (ENSCARG00000068485)	sema5a (ENSCARG00000068304)	ENSCARG00000068268	timm21 (ENSCARG00000068247)	NETO1 (ENSCARG00000068203)	DPP6 (ENSCARG00000067132)	ENSCARG00000066992	ENSCARG00000066987	ENSCARG00000066699	ENSCARG00000066677	GPR158 (ENSCARG00000066662)	anxa13 (ENSCARG00000066612)	myo3a (ENSCARG00000065661)	gad2 (ENSCARG00000065510)	apbb1ip (ENSCARG00000065476)	pdss1 (ENSCARG00000065456) ##22	abi1a (ENSCARG00000064987)	acbd5a (ENSCARG00000064931)	mastl (ENSCARG00000064910)	ENSCARG00000064899	ENSCARG00000064896	trpc1 (ENSCARG00000064882)	ENSCARG00000064879	CHST2 (ENSCARG00000064873)	ENSCARG00000064871	dipk2ab (ENSCARG00000064865)	ENSCARG00000064862
Zebrafish	MODERN SPECIES	16	DPP6 (ENSDARG00000076826)	enkur (ENSDARG00000031248)	ENSDARG00000074528	ARHGAP21 (ENSDARG00000104295)	GPR158 (ENSDARG00000077134)	anxa13 (ENSDARG00000013976)	ENSDARG00000055476	zgc:174877 (ENSDARG00000079278)	myo3a (ENSDARG00000010186)	gad2 (ENSDARG00000015537)	ENSDARG00000096932	ENSDARG00000055506	apbb1ip (ENSDARG00000016505)	ENSDARG00000055520	ENSDARG00000095609	pdss1 (ENSDARG00000017910) ##22	abi1a (ENSDARG00000010155)	acbd5a (ENSDARG00000034883)	ENSDARG00000116862	mastl (ENSDARG00000055566)	ENSDARG00000113632	pcolce2b (ENSDARG00000055575)	trpc1 (ENSDARG00000061203)	ENSDARG00000095245	ENSDARG00000095333	ENSDARG00000061221	ENSDARG00000092898	CHST2 (ENSDARG00000058585)	dipk2ab (ENSDARG00000055629)	plod2 (ENSDARG00000011821)	ENSDARG00000077468
Clupeiformes	ANCESTRAL SPECIES	231	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280.a.b	ENSGT00940000161144	ENSGT00940000153866.A	ENSGT00940000164792.a	ENSGT00940000155406.g	ENSGT00940000158727.b.a.a.a	ENSGT00940000155918.c.a	ENSGT00940000166789	ENSGT00390000013183.c	ENSGT00940000155939	ENSGT00940000157951	ENSGT00940000156105.k.a	ENSGT00390000005508.b	ENSGT00940000153498.B.a ##22	ENSGT00940000154811.B.a.a.b	ENSGT00940000156350.h	ENSGT00940000157002	ENSGT00550000074836.p	ENSGT00940000164060.m	ENSGT00940000158727.b.a.a.b	ENSGT00940000164060.n	ENSGT00940000158727.a	ENSGT00940000166120	ENSGT00940000167726
Atlantic herring	MODERN SPECIES	8	ENSCHAG00000014104	ENSCHAG00000014084	ENSCHAG00000014077	DPP6 (ENSCHAG00000013833)	THNSL1 (ENSCHAG00000013823)	enkur (ENSCHAG00000013817)	ENSCHAG00000013459	ARHGAP21 (ENSCHAG00000013387)	PTCHD3 (ENSCHAG00000013375)	GPR158 (ENSCHAG00000013030)	ENSCHAG00000012984	myo3a (ENSCHAG00000011556)	gad2 (ENSCHAG00000010888)	apbb1ip (ENSCHAG00000010773)	ENSCHAG00000010708	pdss1 (ENSCHAG00000010461) ##22	abi1a (ENSCHAG00000010398)	acbd5a (ENSCHAG00000010360)	mastl (ENSCHAG00000010245)	YME1L1 (ENSCHAG00000008093)	ENSCHAG00000008007	PTCHD3 (ENSCHAG00000007975)	fasn2 (ENSCHAG00000007930)	ENSCHAG00000007912	ENSCHAG00000007906	ENSCHAG00000007890	ENSCHAG00000007872	fasn2 (ENSCHAG00000007854)	PTCHD3 (ENSCHAG00000007841)	PTCHD3 (ENSCHAG00000007764)	ENSCHAG00000007709
Denticle herring	MODERN SPECIES	11	ENSDCDG00000018168	PTCHD1 (ENSDCDG00000018165)	ENSDCDG00000018154	si:ch73-264p11.1 (ENSDCDG00000018143)	ENSDCDG00000018141	ENSDCDG00000018139	enkur (ENSDCDG00000018130)	ENSDCDG00000018132	ARHGAP21 (ENSDCDG00000017003)	PTCHD3 (ENSDCDG00000016995)	GPR158 (ENSDCDG00000016983)	anxa13 (ENSDCDG00000016885)	ENSDCDG00000016881	gad2 (ENSDCDG00000016675)	apbb1ip (ENSDCDG00000016673)	pdss1 (ENSDCDG00000016669) ##22	abi1a (ENSDCDG00000016486)	acbd5a (ENSDCDG00000016470)	mastl (ENSDCDG00000016458)	ENSDCDG00000016435	PTCHD3 (ENSDCDG00000016433)	fasn2 (ENSDCDG00000016430)	PTCHD3 (ENSDCDG00000016425)	PTCHD3 (ENSDCDG00000016422)	fasn2 (ENSDCDG00000016420)	rdh12l (ENSDCDG00000016417)	ENSDCDG00000016410	ENSDCDG00000016405	C1QL3 (ENSDCDG00000016402)	RSU1 (ENSDCDG00000016398)	trdmt1 (ENSDCDG00000016355)
Spotted gar	MODERN SPECIES	675	cryba1l2 (ENSLOCG00000007888)	crybb1l2 (ENSLOCG00000007867)	mpeg1.2 (ENSLOCG00000007854)	ENSLOCG00000007834	NEU1 (ENSLOCG00000007818)	ENSLOCG00000018122	tmem17 (ENSLOCG00000007806)	ENSLOCG00000007794	THNSL1 (ENSLOCG00000018121)	GPR158 (ENSLOCG00000007776)	ENSLOCG00000007759	myo3a (ENSLOCG00000007720)	gad2 (ENSLOCG00000007705)	ENSLOCG00000007691	apbb1ip (ENSLOCG00000007664)	pdss1 (ENSLOCG00000007637) ##22	abi1a (ENSLOCG00000007606)	acbd5a (ENSLOCG00000007590)	mastl (ENSLOCG00000007561)	YME1L1 (ENSLOCG00000007535)	PTCHD3 (ENSLOCG00000007517)	ENSLOCG00000007506	rab18a (ENSLOCG00000007491)	mkxa (ENSLOCG00000007475)	ODAD2 (ENSLOCG00000007443)	mpp7a (ENSLOCG00000007418)	waca (ENSLOCG00000007394)	bambia (ENSLOCG00000007374)	MAP3K8 (ENSLOCG00000007364)	MTPAP (ENSLOCG00000007357)	ENSLOCG00000007332
Reedfish	MODERN SPECIES	14	enkur (ENSECRG00000006319)	THNSL1 (ENSECRG00000006314)	GPR158 (ENSECRG00000006251)	ENSECRG00000006223	ENSECRG00000006215	ENSECRG00000006212	ENSECRG00000006210	ENSECRG00000006204	ENSECRG00000006197	ENSECRG00000006189	ENSECRG00000006182	ENSECRG00000006177	myo3a (ENSECRG00000006157)	gad2 (ENSECRG00000006092)	apbb1ip (ENSECRG00000006064)	pdss1 (ENSECRG00000006045) ##22	abi1a (ENSECRG00000006000)	acbd5a (ENSECRG00000005979)	mastl (ENSECRG00000005966)	ENSECRG00000005953	ENSECRG00000005941	fasn2 (ENSECRG00000005930)	PTCHD3 (ENSECRG00000005908)	PTCHD3 (ENSECRG00000005890)	yme1l1b (ENSECRG00000005872)	rab18a (ENSECRG00000005862)	mkxa (ENSECRG00000005800)	ODAD2 (ENSECRG00000005774)	mpp7a (ENSECRG00000005745)	waca (ENSECRG00000005706)	bambia (ENSECRG00000005686)
Elephant shark	MODERN SPECIES	1571	ENSCMIG00000002262	naprt (ENSCMIG00000002232)	RHPN1 (ENSCMIG00000002212)	ENSCMIG00000002201	mafaa (ENSCMIG00000002198)	ENSCMIG00000002191	ENSCMIG00000002184	ESYT2 (ENSCMIG00000002120)	ENSCMIG00000002051	ENSCMIG00000002047	ENSCMIG00000002041	ENSCMIG00000002038	gad2 (ENSCMIG00000001893)	APBB1IP (ENSCMIG00000001816)	ENSCMIG00000001788	pdss1 (ENSCMIG00000001739) ##22	ENSCMIG00000001612	acbd5a (ENSCMIG00000001558)	ENSCMIG00000001549	yme1l1b (ENSCMIG00000001014)	PTCHD3 (ENSCMIG00000000853)	fasn2 (ENSCMIG00000000849)	ENSCMIG00000000846	ENSCMIG00000000839	ENSCMIG00000000833	ENSCMIG00000000826
Ciona	ANCESTRAL SPECIES																	ENSGT00940000153498.B.a ##22
Ciona savignyi	MODERN SPECIES	121	ENSCSAVG00000006373	ENSCSAVG00000006377	ENSCSAVG00000006423	ENSCSAVG00000006430	ENSCSAVG00000006445	ENSCSAVG00000006486	ENSCSAVG00000006487	ENSCSAVG00000006488	ENSCSAVG00000006491	ENSCSAVG00000006493	ENSCSAVG00000006519	ENSCSAVG00000006521	ENSCSAVG00000006591	ENSCSAVG00000006594	ENSCSAVG00000006599	ENSCSAVG00000006633 ##22	ENSCSAVG00000006661	ENSCSAVG00000006676	ENSCSAVG00000006680	ENSCSAVG00000006696	ENSCSAVG00000006704	ENSCSAVG00000006724	ENSCSAVG00000006756	ENSCSAVG00000006757	ENSCSAVG00000006762	ENSCSAVG00000006767	ENSCSAVG00000006770	ENSCSAVG00000006784	ENSCSAVG00000006804	ENSCSAVG00000006805	ENSCSAVG00000006806
Ciona intestinalis	MODERN SPECIES	61	ENSCING00000023538	ENSCING00000023129	ENSCING00000001648	ENSCING00000001643	ENSCING00000021840	ENSCING00000016265	ENSCING00000019213	ENSCING00000022272	ENSCING00000001325	ENSCING00000001280	ENSCING00000000316	ENSCING00000001291	ENSCING00000022953	ENSCING00000024020	ENSCING00000017331	ENSCING00000001276 ##22	ENSCING00000020785	ENSCING00000021778
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153498.B.a ##22
Caenorhabditis elegans	MODERN SPECIES		C09D4.6 (WBGene00015636)	rpl-19 (WBGene00004431)	C09D4.4 (WBGene00015635)	let-355 (WBGene00020263)	hil-8 (WBGene00001859)	F27C1.13 (WBGene00017860)	F27C1.1 (WBGene00017851)	F27C1.11 (WBGene00017858)	dpy-5 (WBGene00001067)	F27C1.2 (WBGene00017852)	atp-3 (WBGene00000230)	F27C1.3 (WBGene00017853)	F27C1.4 (WBGene00017854)	F27C1.6 (WBGene00017855)	erp-44.1 (WBGene00016278)	coq-1 (WBGene00000761) ##22	frm-4 (WBGene00001491)	C24A11.1 (WBGene00016040)	tent-5 (WBGene00004131)	zhp-1 (WBGene00018867)	F55A12.2 (WBGene00018863)	ppk-1 (WBGene00004087)	dhs-2 (WBGene00000966)	nath-10 (WBGene00018866)	F55A12.5 (WBGene00018864)	apm-1 (WBGene00000150)	F55A12.18 (WBGene00304996)	F55A12.6 (WBGene00018865)	F48C1.8 (WBGene00018600)	F48C1.11 (WBGene00195179)	F48C1.9 (WBGene00018601)
Fruitfly	MODERN SPECIES	19	PNPase (FBgn0039846)	Gcn2 (FBgn0019990)	Ugt35D1 (FBgn0051002)	CG31204 (FBgn0051204)	CG1607 (FBgn0039844)	gskt (FBgn0046332)	CG34347 (FBgn0085376)	pHCl-2 (FBgn0039840)	ppk24 (FBgn0039839)	CAH5 (FBgn0040629)	CAH16 (FBgn0040628)	CAH6 (FBgn0039838)	spn-F (FBgn0086362)	CG1750 (FBgn0039836)	mRpL32 (FBgn0039835)	qless (FBgn0051005) ##22	CG15564 (FBgn0039833)	CG15563 (FBgn0039832)	CG12054 (FBgn0039831)	ATPsynC (FBgn0039830)	CG15561 (FBgn0039829)	CG1542 (FBgn0039828)	Zwilch (FBgn0061476)	chp (FBgn0267435)	CG1544 (FBgn0039827)	bnk (FBgn0004389)	mesh (FBgn0051004)	stops (FBgn0086704)	Gycbeta100B (FBgn0013973)	CG15556 (FBgn0039821)	CG15554 (FBgn0039820)