Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Primates	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.z ##24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.d	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b.a #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.d	ENSGT00390000018829.y.a.a #24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b.a #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Cebidae_a	ANCESTRAL SPECIES	88	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b.e.a #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.d	ENSGT00390000018829.y.a.a #24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b.a #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Capuchin	MODERN SPECIES	160							FOXO3 (ENSCCAG00000030927) #13	AFG1L (ENSCCAG00000022433) #14	ENSCCAG00000033758 #15	ENSCCAG00000022069 #16	NR2E1 (ENSCCAG00000034016) #17	OSTM1 (ENSCCAG00000025943) #18	SEC63 (ENSCCAG00000024413) #19	SCML4 (ENSCCAG00000033652) #20	SOBP (ENSCCAG00000036289) #21	PDSS2 (ENSCCAG00000036171) #22	BEND3 (ENSCCAG00000032949) #23	CD24 (ENSCCAG00000034871) #24	QRSL1 (ENSCCAG00000021243) #25	RTN4IP1 (ENSCCAG00000015806) #26	CRYBG1 (ENSCCAG00000022546) #27	ATG5 (ENSCCAG00000022296) #28	PRDM1 (ENSCCAG00000031062) #29	PREP (ENSCCAG00000033502) #30	POPDC3 (ENSCCAG00000036176) #31	BVES (ENSCCAG00000027637) #32	LIN28B (ENSCCAG00000020904) #33	HACE1 (ENSCCAG00000028892) #34
Bolivian squirrel monkey	MODERN SPECIES	121	SESN1 (ENSSBOG00000034887)	ARMC2 (ENSSBOG00000034359)	ENSSBOG00000025905 #13	ENSSBOG00000026053	AFG1L (ENSSBOG00000032088) #14	SNX3 (ENSSBOG00000028606) #16	NR2E1 (ENSSBOG00000027068) #17	ENSSBOG00000019719	OSTM1 (ENSSBOG00000018033) #18	ENSSBOG00000035021	SEC63 (ENSSBOG00000020518) #19	ENSSBOG00000022627	SCML4 (ENSSBOG00000023263) #20	ENSSBOG00000012379	SOBP (ENSSBOG00000031278) #21	PDSS2 (ENSSBOG00000021644) #22	ENSSBOG00000029782 #23	MTRES1 (ENSSBOG00000020668)	ENSSBOG00000034823	ENSSBOG00000032630	QRSL1 (ENSSBOG00000022441) #25	RTN4IP1 (ENSSBOG00000027877) #26	CRYBG1 (ENSSBOG00000033025) #27	ATG5 (ENSSBOG00000031707) #28	PRDM1 (ENSSBOG00000023139) #29	ENSSBOG00000024567 #30	POPDC3 (ENSSBOG00000025829) #31	BVES (ENSSBOG00000024089) #32	LIN28B (ENSSBOG00000025323) #33	HACE1 (ENSSBOG00000024126) #34	NTNG2 (ENSSBOG00000030323)
Marmoset	MODERN SPECIES	16	CEP57L1 (ENSCJAG00000005825)	SESN1 (ENSCJAG00000005880)	ARMC2 (ENSCJAG00000005915)	ENSCJAG00000005929 #13	AFG1L (ENSCJAG00000045868) #14	SNX3 (ENSCJAG00000005955) #16	NR2E1 (ENSCJAG00000005966) #17	ENSCJAG00000059326	ENSCJAG00000070984	OSTM1 (ENSCJAG00000040617) #18	SEC63 (ENSCJAG00000005998) #19	SCML4 (ENSCJAG00000006102) #20	SOBP (ENSCJAG00000006119) #21	ENSCJAG00000084385	ENSCJAG00000076519	PDSS2 (ENSCJAG00000006153) #22	ENSCJAG00000080202	BEND3 (ENSCJAG00000039628) #23	MTRES1 (ENSCJAG00000046921)	ENSCJAG00000073856	ENSCJAG00000058620 #24	QRSL1 (ENSCJAG00000006200) #25	RTN4IP1 (ENSCJAG00000006218) #26	ENSCJAG00000079990	CRYBG1 (ENSCJAG00000006246) #27	ENSCJAG00000074624	PRDM1 (ENSCJAG00000006332) #29	ENSCJAG00000079207	ATG5 (ENSCJAG00000006306) #28	ENSCJAG00000085831	ENSCJAG00000074740
Mas night monkey	MODERN SPECIES	478	ENSANAG00000036298	CEP57L1 (ENSANAG00000031702)	SESN1 (ENSANAG00000026899)	ARMC2 (ENSANAG00000027283)	ENSANAG00000023931 #13	AFG1L (ENSANAG00000033061) #14	SNX3 (ENSANAG00000028701) #16	ENSANAG00000030536	NR2E1 (ENSANAG00000020325) #17	ENSANAG00000037950	ENSANAG00000019987	SEC63 (ENSANAG00000022108) #19	SCML4 (ENSANAG00000021645) #20	ENSANAG00000025986	SOBP (ENSANAG00000034007) #21	PDSS2 (ENSANAG00000015555) #22	BEND3 (ENSANAG00000021126) #23	ENSANAG00000037315	ENSANAG00000036990	ENSANAG00000037838 ##24	ENSANAG00000003965 #25	RTN4IP1 (ENSANAG00000037479) #26	CRYBG1 (ENSANAG00000023839) #27	ENSANAG00000027713	ATG5 (ENSANAG00000022796) #28	PRDM1 (ENSANAG00000030675) #29	ENSANAG00000024327	ENSANAG00000015673 #30	POPDC3 (ENSANAG00000026735) #31	BVES (ENSANAG00000015115) #32	ENSANAG00000036677 #33
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.y.b ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b.a #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Hominidae	ANCESTRAL SPECIES	5	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.y.b ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b.a #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00510000046986.n.a.a.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.y.b ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b.a #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Gorilla	MODERN SPECIES	19	SESN1 (ENSGGOG00000008196)	ENSGGOG00000024963	ARMC2 (ENSGGOG00000008179)	ENSGGOG00000043953	ENSGGOG00000040628	ENSGGOG00000003517 #13	AFG1L (ENSGGOG00000004244) #14	SNX3 (ENSGGOG00000043438) #16	NR2E1 (ENSGGOG00000038410) #17	ENSGGOG00000041051 #17	OSTM1 (ENSGGOG00000009031) #18	ENSGGOG00000026319	SEC63 (ENSGGOG00000002560) #19	SCML4 (ENSGGOG00000006782) #20	SOBP (ENSGGOG00000015284) #21	PDSS2 (ENSGGOG00000040827) #22	BEND3 (ENSGGOG00000005456) #23	MTRES1 (ENSGGOG00000006113)	QRSL1 (ENSGGOG00000008261) #25	RTN4IP1 (ENSGGOG00000008254) #26	CRYBG1 (ENSGGOG00000016733) #27	PRDM1 (ENSGGOG00000001929) #29	ATG5 (ENSGGOG00000016633) #28	PREP (ENSGGOG00000017196) #30	POPDC3 (ENSGGOG00000017179) #31	BVES (ENSGGOG00000026505) #32	LIN28B (ENSGGOG00000015437) #33	HACE1 (ENSGGOG00000008591) #34	ENSGGOG00000043856	GRIK2 (ENSGGOG00000000114)	ASCC3 (ENSGGOG00000002790)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00510000046986.n.a.a.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.y.b ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b.a #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Pan	ANCESTRAL SPECIES	5	ENSGT00530000063695.b.a.a	ENSGT00950000183168.B.b	ENSGT00510000046986.n.a.a.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000017606.a.a.i.a.b.a.b.a.a.b	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00940000167536	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b.a #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Chimpanzee	MODERN SPECIES	19	CEP57L1 (ENSPTRG00000018480)	SESN1 (ENSPTRG00000018479)	ENSPTRG00000045969	ARMC2 (ENSPTRG00000018477)	ENSPTRG00000052234	ENSPTRG00000045358	FOXO3 (ENSPTRG00000018476) #13	AFG1L (ENSPTRG00000018474) #14	SNX3 (ENSPTRG00000018473) #16	NR2E1 (ENSPTRG00000018472) #17	OSTM1 (ENSPTRG00000018471) #18	ENSPTRG00000049504	SEC63 (ENSPTRG00000018470) #19	SCML4 (ENSPTRG00000018469) #20	SOBP (ENSPTRG00000018467) #21	PDSS2 (ENSPTRG00000018466) #22	BEND3 (ENSPTRG00000018465) #23	MTRES1 (ENSPTRG00000018464)	ENSPTRG00000042685	QRSL1 (ENSPTRG00000018462) #25	RTN4IP1 (ENSPTRG00000018461) #26	CRYBG1 (ENSPTRG00000018459) #27	PRDM1 (ENSPTRG00000018457) #29	ATG5 (ENSPTRG00000018458) #28	PREP (ENSPTRG00000018456) #30	POPDC3 (ENSPTRG00000018455) #31	BVES (ENSPTRG00000018454) #32	LIN28B (ENSPTRG00000018453) #33	HACE1 (ENSPTRG00000018451) #34	GRIK2 (ENSPTRG00000018449)	ENSPTRG00000047929
Bonobo	MODERN SPECIES	19	CEP57L1 (ENSPPAG00000042916)	SESN1 (ENSPPAG00000041767)	ENSPPAG00000011766	ARMC2 (ENSPPAG00000029392)	ENSPPAG00000031267	ENSPPAG00000037969	ENSPPAG00000000536 #13	AFG1L (ENSPPAG00000019727) #14	SNX3 (ENSPPAG00000032382) #16	NR2E1 (ENSPPAG00000038954) #17	OSTM1 (ENSPPAG00000043416) #18	ENSPPAG00000033502	SEC63 (ENSPPAG00000011744) #19	SCML4 (ENSPPAG00000020145) #20	SOBP (ENSPPAG00000037988) #21	PDSS2 (ENSPPAG00000035956) #22	BEND3 (ENSPPAG00000039227) #23	MTRES1 (ENSPPAG00000032445)	ENSPPAG00000028244	QRSL1 (ENSPPAG00000030790) #25	RTN4IP1 (ENSPPAG00000031639) #26	CRYBG1 (ENSPPAG00000030684) #27	ATG5 (ENSPPAG00000040499) #28	PRDM1 (ENSPPAG00000025287) #29	PREP (ENSPPAG00000014953) #30	POPDC3 (ENSPPAG00000031101) #31	BVES (ENSPPAG00000036836) #32	LIN28B (ENSPPAG00000038725) #33	HACE1 (ENSPPAG00000043105) #34	GRIK2 (ENSPPAG00000037072)	ASCC3 (ENSPPAG00000030772)
Human	MODERN SPECIES	18	MICAL1 (ENSG00000135596)	SMPD2 (ENSG00000135587)	PPIL6 (ENSG00000185250)	CD164 (ENSG00000135535)	CEP57L1 (ENSG00000183137)	SESN1 (ENSG00000080546)	ARMC2 (ENSG00000118690)	FOXO3 (ENSG00000118689) #13	AFG1L (ENSG00000135537) #14	SNX3 (ENSG00000112335) #16	NR2E1 (ENSG00000112333) #17	OSTM1 (ENSG00000081087) #18	SEC63 (ENSG00000025796) #19	SCML4 (ENSG00000146285) #20	SOBP (ENSG00000112320) #21	PDSS2 (ENSG00000164494) #22	BEND3 (ENSG00000178409) #23	MTRES1 (ENSG00000130349)	CD24 (ENSG00000272398) ##24	QRSL1 (ENSG00000130348) #25	RTN4IP1 (ENSG00000130347) #26	CRYBG1 (ENSG00000112297) #27	ATG5 (ENSG00000057663) #28	PRDM1 (ENSG00000057657) #29	PREP (ENSG00000085377) #30	POPDC3 (ENSG00000132429) #31	BVES (ENSG00000112276) #32	LIN28B (ENSG00000187772) #33	HACE1 (ENSG00000085382) #34	GRIK2 (ENSG00000164418)	ASCC3 (ENSG00000112249)
Orangutan	MODERN SPECIES	19	ENSPPYG00000016907	CD164 (ENSPPYG00000016906)	CEP57L1 (ENSPPYG00000016901)	SESN1 (ENSPPYG00000016900)	ARMC2 (ENSPPYG00000016899)	ENSPPYG00000016897	ENSPPYG00000016896 #13	AFG1L (ENSPPYG00000016895) #14	SNX3 (ENSPPYG00000016894) #16	NR2E1 (ENSPPYG00000016893) #17	OSTM1 (ENSPPYG00000016892) #18	ENSPPYG00000031910	SEC63 (ENSPPYG00000016891) #19	SCML4 (ENSPPYG00000016890) #20	SOBP (ENSPPYG00000016889) #21	PDSS2 (ENSPPYG00000016887) #22	BEND3 (ENSPPYG00000016886) #23	MTRES1 (ENSPPYG00000016885)	CD24 (ENSPPYG00000016884) ##24	ENSPPYG00000016334	QRSL1 (ENSPPYG00000016883) #25	RTN4IP1 (ENSPPYG00000016882) #26	CRYBG1 (ENSPPYG00000016881) #27	PRDM1 (ENSPPYG00000016879) #29	ATG5 (ENSPPYG00000016880) #28	PREP (ENSPPYG00000029726) #30	POPDC3 (ENSPPYG00000016878) #31	BVES (ENSPPYG00000016876) #32	LIN28B (ENSPPYG00000031457) #33	HACE1 (ENSPPYG00000016873) #34	GRIK2 (ENSPPYG00000016870)
Gibbon	MODERN SPECIES	18	PPIL6 (ENSNLEG00000012561)	CD164 (ENSNLEG00000012527)	ENSNLEG00000012520	CEP57L1 (ENSNLEG00000012502)	SESN1 (ENSNLEG00000012476)	ARMC2 (ENSNLEG00000012451)	ENSNLEG00000012446 #13	AFG1L (ENSNLEG00000013680) #14	SNX3 (ENSNLEG00000033323) #16	NR2E1 (ENSNLEG00000013646) #17	OSTM1 (ENSNLEG00000013621) #18	SEC63 (ENSNLEG00000013526) #19	SCML4 (ENSNLEG00000013516) #20	ENSNLEG00000027102	SOBP (ENSNLEG00000013498) #21	PDSS2 (ENSNLEG00000013484) #22	BEND3 (ENSNLEG00000013464) #23	MTRES1 (ENSNLEG00000013450)	QRSL1 (ENSNLEG00000013383) #25	RTN4IP1 (ENSNLEG00000013349) #26	CRYBG1 (ENSNLEG00000013318) #27	PRDM1 (ENSNLEG00000013211) #29	ATG5 (ENSNLEG00000013268) #28	PREP (ENSNLEG00000014171) #30	POPDC3 (ENSNLEG00000014163) #31	BVES (ENSNLEG00000014155) #32	LIN28B (ENSNLEG00000014146) #33	HACE1 (ENSNLEG00000014061) #34	GRIK2 (ENSNLEG00000013983)	ENSNLEG00000013981	ASCC3 (ENSNLEG00000013890)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00950000182895.a.a.a.a.b.k	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000155616.c.a.f	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b	ENSGT00390000015164.l	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00550000074968.b	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000160715	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b.a	ENSGT00390000015164.l	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00550000074968.b	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Pig-tailed macaque	MODERN SPECIES	553	SYNJ2 (ENSMNEG00000017211)	SERAC1 (ENSMNEG00000041761)	GTF2H5 (ENSMNEG00000036678)	ENSMNEG00000038872	TULP4 (ENSMNEG00000036789)	ENSMNEG00000038298	TMEM181 (ENSMNEG00000028961)	DYNLT1 (ENSMNEG00000036826)	SYTL3 (ENSMNEG00000043100)	EZR (ENSMNEG00000039070)	ENSMNEG00000028772	ENSMNEG00000035124	SEC63 (ENSMNEG00000037461) #19	SCML4 (ENSMNEG00000036341) #20	SOBP (ENSMNEG00000037530) #21	PDSS2 (ENSMNEG00000027986) #22	BEND3 (ENSMNEG00000036299) #23	ENSMNEG00000028746	ENSMNEG00000034018 ##24	ENSMNEG00000043762	ENSMNEG00000039721	QRSL1 (ENSMNEG00000039617) #25	RTN4IP1 (ENSMNEG00000045014) #26	CRYBG1 (ENSMNEG00000033538) #27	ATG5 (ENSMNEG00000032866) #28	PRDM1 (ENSMNEG00000032369) #29	ENSMNEG00000045422	PREP (ENSMNEG00000043839) #30	POPDC3 (ENSMNEG00000014319) #31	BVES (ENSMNEG00000033730) #32	LIN28B (ENSMNEG00000038148) #33
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000156483	ENSGT00940000156557	ENSGT00940000160715	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913	ENSGT00390000007183	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b.a	ENSGT00390000015164.l	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a	ENSGT00390000018829.z ##24	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Crab-eating macaque	MODERN SPECIES	14	SYNJ2 (ENSMFAG00000040552)	SERAC1 (ENSMFAG00000042904)	GTF2H5 (ENSMFAG00000037102)	TULP4 (ENSMFAG00000002792)	TMEM181 (ENSMFAG00000003593)	DYNLT1 (ENSMFAG00000033424)	SYTL3 (ENSMFAG00000001875)	ENSMFAG00000063938	EZR (ENSMFAG00000002822)	ENSMFAG00000034442	ENSMFAG00000041251	SEC63 (ENSMFAG00000034177) #19	ENSMFAG00000047785	SCML4 (ENSMFAG00000000713) #20	SOBP (ENSMFAG00000031853) #21	PDSS2 (ENSMFAG00000031137) #22	BEND3 (ENSMFAG00000043850) #23	ENSMFAG00000034144	ENSMFAG00000064133 ##24	ENSMFAG00000037584	RTN4IP1 (ENSMFAG00000045409) #26	CRYBG1 (ENSMFAG00000038353) #27	ENSMFAG00000051465	ATG5 (ENSMFAG00000041362) #28	PRDM1 (ENSMFAG00000037637) #29	PREP (ENSMFAG00000038505) #30	POPDC3 (ENSMFAG00000040532) #31	BVES (ENSMFAG00000045432) #32	LIN28B (ENSMFAG00000065717) #33	HACE1 (ENSMFAG00000039999) #34	ENSMFAG00000052218
Rhesus	MODERN SPECIES	14	ARID1B (ENSMMUG00000002270)	TMEM242 (ENSMMUG00000052641)	ZDHHC14 (ENSMMUG00000015872)	SNX9 (ENSMMUG00000007142)	SYNJ2 (ENSMMUG00000007153)	SERAC1 (ENSMMUG00000029510)	GTF2H5 (ENSMMUG00000049294)	TULP4 (ENSMMUG00000019448)	TMEM181 (ENSMMUG00000019450)	DYNLT1 (ENSMMUG00000019454)	SYTL3 (ENSMMUG00000058074)	EZR (ENSMMUG00000019457)	SEC63 (ENSMMUG00000016598) #19	SCML4 (ENSMMUG00000014936) #20	SOBP (ENSMMUG00000022950) #21	PDSS2 (ENSMMUG00000002271) #22	BEND3 (ENSMMUG00000052231) #23	MTRES1 (ENSMMUG00000050334)	ENSMMUG00000056792 ##24	QRSL1 (ENSMMUG00000008330) #25	RTN4IP1 (ENSMMUG00000008121) #26	CRYBG1 (ENSMMUG00000008120) #27	ATG5 (ENSMMUG00000019679) #28	PRDM1 (ENSMMUG00000021401) #29	PREP (ENSMMUG00000013483) #30	POPDC3 (ENSMMUG00000014473) #31	BVES (ENSMMUG00000014471) #32	LIN28B (ENSMMUG00000064609) #33	HACE1 (ENSMMUG00000014703) #34	ENSMMUG00000055978	GRIK2 (ENSMMUG00000009856)
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000155616.c.a.f	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b	ENSGT00390000015164.l	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00550000074968.b	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Olive baboon	MODERN SPECIES	16	ZDHHC14 (ENSPANG00000007490)	SNX9 (ENSPANG00000008674)	SYNJ2 (ENSPANG00000010755)	SERAC1 (ENSPANG00000019055)	GTF2H5 (ENSPANG00000039941)	TULP4 (ENSPANG00000022014)	TMEM181 (ENSPANG00000018078)	DYNLT1 (ENSPANG00000021141)	SYTL3 (ENSPANG00000011916)	EZR (ENSPANG00000016175)	ENSPANG00000034964	ENSPANG00000043729	SEC63 (ENSPANG00000004976) #19	SCML4 (ENSPANG00000017725) #20	SOBP (ENSPANG00000021646) #21	PDSS2 (ENSPANG00000017550) #22	BEND3 (ENSPANG00000024031) #23	MTRES1 (ENSPANG00000025271)	ENSPANG00000037991	ENSPANG00000040240 ##24	ENSPANG00000049765	ENSPANG00000041919	ENSPANG00000044349	QRSL1 (ENSPANG00000016880) #25	RTN4IP1 (ENSPANG00000008266) #26	CRYBG1 (ENSPANG00000021647) #27	PRDM1 (ENSPANG00000050119) #29	ATG5 (ENSPANG00000025450) #28	ENSPANG00000046918	PREP (ENSPANG00000015134) #30	POPDC3 (ENSPANG00000010757) #31
Cercopithecinae_d	ANCESTRAL SPECIES	35	ENSGT00390000003560	ENSGT00390000004028	ENSGT00390000013264.d.e.b	ENSGT00940000155913	ENSGT00910000147301	ENSGT00390000007183	ENSGT00940000155616.c.a.f	ENSGT00940000154531.y.a	ENSGT00940000160610	ENSGT01090000260082.d.b	ENSGT00390000001376.ab.b.a.a.b	ENSGT00390000015164.l	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366.c.a.a	ENSGT00940000167536	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00550000074866.i #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00950000186448	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00550000074968.b	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33
Drill	MODERN SPECIES	1200										ENSMLEG00000030698	ENSMLEG00000016056	ENSMLEG00000035536	ENSMLEG00000023103	ENSMLEG00000033113	ENSMLEG00000032648 #21	PDSS2 (ENSMLEG00000043220) #22	BEND3 (ENSMLEG00000028839) #23	ENSMLEG00000034658	ENSMLEG00000021892	QRSL1 (ENSMLEG00000039233) #25	RTN4IP1 (ENSMLEG00000033710) #26
Sooty mangabey	MODERN SPECIES	139	SYNJ2 (ENSCATG00000042943)	SERAC1 (ENSCATG00000040610)	GTF2H5 (ENSCATG00000044459)	ENSCATG00000045359	TULP4 (ENSCATG00000030922)	ENSCATG00000016948	TMEM181 (ENSCATG00000037574)	ENSCATG00000041684	DYNLT1 (ENSCATG00000042124)	SYTL3 (ENSCATG00000033317)	EZR (ENSCATG00000030432)	ENSCATG00000020673	SEC63 (ENSCATG00000041502) #19	SCML4 (ENSCATG00000031314) #20	SOBP (ENSCATG00000045250) #21	PDSS2 (ENSCATG00000045083) #22	BEND3 (ENSCATG00000044885) #23	ENSCATG00000000450	ENSCATG00000030902	ENSCATG00000031493	ENSCATG00000041315	QRSL1 (ENSCATG00000041686) #25	RTN4IP1 (ENSCATG00000045221) #26	CRYBG1 (ENSCATG00000030957) #27	ATG5 (ENSCATG00000032926) #28	PRDM1 (ENSCATG00000029610) #29	ENSCATG00000003731	PREP (ENSCATG00000029835) #30	POPDC3 (ENSCATG00000018981) #31	BVES (ENSCATG00000037642) #32	LIN28B (ENSCATG00000037900) #33
Vervet Monkey	MODERN SPECIES	4	PPIL6 (ENSCSAG00000015318)	CD164 (ENSCSAG00000015315)	ENSCSAG00000015288	CEP57L1 (ENSCSAG00000015274)	SESN1 (ENSCSAG00000015254)	ARMC2 (ENSCSAG00000015188)	ENSCSAG00000015174 #13	AFG1L (ENSCSAG00000015166) #14	SNX3 (ENSCSAG00000015156) #16	NR2E1 (ENSCSAG00000015143) #17	OSTM1 (ENSCSAG00000015115) #18	SEC63 (ENSCSAG00000015043) #19	SCML4 (ENSCSAG00000014941) #20	SOBP (ENSCSAG00000014908) #21	ENSCSAG00000014888	PDSS2 (ENSCSAG00000014881) #22	BEND3 (ENSCSAG00000014875) #23	MTRES1 (ENSCSAG00000014865)	QRSL1 (ENSCSAG00000014852) #25	RTN4IP1 (ENSCSAG00000014845) #26	CRYBG1 (ENSCSAG00000014817) #27	ENSCSAG00000014764	ATG5 (ENSCSAG00000014751) #28	PRDM1 (ENSCSAG00000014744) #29	PREP (ENSCSAG00000014741) #30	POPDC3 (ENSCSAG00000014725) #31	BVES (ENSCSAG00000014711) #32	LIN28B (ENSCSAG00000014708) #33	HACE1 (ENSCSAG00000014704) #34	ENSCSAG00000014695	ENSCSAG00000018976
Rhinopithecus	ANCESTRAL SPECIES	282	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00390000005306.v	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00910000147202	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	669																ENSRBIG00000034899 #22
Black snub-nosed monkey	MODERN SPECIES	611	PPIL6 (ENSRBIG00000039141)	CD164 (ENSRBIG00000017887)	ENSRBIG00000029996	CEP57L1 (ENSRBIG00000032920)	SESN1 (ENSRBIG00000044534)	ARMC2 (ENSRBIG00000039423)	ENSRBIG00000041006 #13	AFG1L (ENSRBIG00000043286) #14	SNX3 (ENSRBIG00000036801) #16	NR2E1 (ENSRBIG00000032455) #17	OSTM1 (ENSRBIG00000033044) #18	SEC63 (ENSRBIG00000029238) #19	SCML4 (ENSRBIG00000042673) #20	ENSRBIG00000027620	ENSRBIG00000017827 #21	ENSRBIG00000044333 #22
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1189																ENSRROG00000041554 #22
Golden snub-nosed monkey	MODERN SPECIES	2360			ENSRROG00000000604	SESN1 (ENSRROG00000039007)	ARMC2 (ENSRROG00000038321)	ENSRROG00000015070	ENSRROG00000028438 #13	AFG1L (ENSRROG00000028996) #14	SNX3 (ENSRROG00000037899) #16	NR2E1 (ENSRROG00000044660) #17	OSTM1 (ENSRROG00000029748) #18	SEC63 (ENSRROG00000035523) #19	SCML4 (ENSRROG00000027116) #20	ENSRROG00000024279	SOBP (ENSRROG00000039171) #21	ENSRROG00000033386 #22
Tarsier	MODERN SPECIES	7120														SCML4 (ENSTSYG00000008656) #20	ENSTSYG00000034950 #21	PDSS2 (ENSTSYG00000004161) #22
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00390000002042	ENSGT00530000063695.b	ENSGT00950000183168.B.b.f	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Bushbaby	MODERN SPECIES	117	SMPD2 (ENSOGAG00000015505)	CD164 (ENSOGAG00000015500)	ENSOGAG00000015493	ENSOGAG00000015488	ENSOGAG00000015479	SESN1 (ENSOGAG00000015235)	ARMC2 (ENSOGAG00000010324)	ENSOGAG00000027196 #13	ENSOGAG00000004119 #14	SNX3 (ENSOGAG00000012282) #16	NR2E1 (ENSOGAG00000011992) #17	OSTM1 (ENSOGAG00000015357) #18	SEC63 (ENSOGAG00000015346) #19	SCML4 (ENSOGAG00000006345) #20	SOBP (ENSOGAG00000006342) #21	PDSS2 (ENSOGAG00000006339) #22	BEND3 (ENSOGAG00000027957) #23	MTRES1 (ENSOGAG00000008839)	ENSOGAG00000024102	QRSL1 (ENSOGAG00000012707) #25	RTN4IP1 (ENSOGAG00000012703) #26	ENSOGAG00000012697 #27	ENSOGAG00000032847 #27	ATG5 (ENSOGAG00000004787) #28	PRDM1 (ENSOGAG00000014036) #29	PREP (ENSOGAG00000015233) #30	POPDC3 (ENSOGAG00000011048) #31	BVES (ENSOGAG00000011044) #32	ENSOGAG00000029797	LIN28B (ENSOGAG00000011042) #33	HACE1 (ENSOGAG00000011034) #34
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b.f	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.ab #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Lemuriformes_a	ANCESTRAL SPECIES	63	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b.f	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.ab #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Coquerels sifaka	MODERN SPECIES	492	SMPD2 (ENSPCOG00000001714)	PPIL6 (ENSPCOG00000016101)	CD164 (ENSPCOG00000028678)	CEP57L1 (ENSPCOG00000020909)	SESN1 (ENSPCOG00000023817)	ARMC2 (ENSPCOG00000027583)	ENSPCOG00000024701 #13	ENSPCOG00000018259	AFG1L (ENSPCOG00000014543) #14	SNX3 (ENSPCOG00000020531) #16	NR2E1 (ENSPCOG00000019521) #17	OSTM1 (ENSPCOG00000025401) #18	SEC63 (ENSPCOG00000021091) #19	SCML4 (ENSPCOG00000022920) #20	SOBP (ENSPCOG00000025980) #21	PDSS2 (ENSPCOG00000005947) #22	BEND3 (ENSPCOG00000017387) #23	ENSPCOG00000027220	CD24 (ENSPCOG00000014613) #24	ENSPCOG00000019397 #25	RTN4IP1 (ENSPCOG00000027386) #26	ENSPCOG00000025469	CRYBG1 (ENSPCOG00000022574) #27	PRDM1 (ENSPCOG00000002322) #29	ATG5 (ENSPCOG00000015617) #28	PREP (ENSPCOG00000018527) #30	POPDC3 (ENSPCOG00000022458) #31	BVES (ENSPCOG00000023354) #32	LIN28B (ENSPCOG00000016875) #33	HACE1 (ENSPCOG00000016340) #34	ENSPCOG00000020641
Greater bamboo lemur	MODERN SPECIES	187						ENSPSMG00000002940	ARMC2 (ENSPSMG00000002952)	ENSPSMG00000002963 #13	AFG1L (ENSPSMG00000002975) #14	ENSPSMG00000002992 #16	NR2E1 (ENSPSMG00000003030) #17	OSTM1 (ENSPSMG00000003042) #18	SEC63 (ENSPSMG00000003081) #19	SCML4 (ENSPSMG00000003119) #20	SOBP (ENSPSMG00000003137) #21	PDSS2 (ENSPSMG00000003161) #22	ENSPSMG00000003169	BEND3 (ENSPSMG00000003180) #23	MTRES1 (ENSPSMG00000003201)	ENSPSMG00000003206 #24	QRSL1 (ENSPSMG00000003285) #25	RTN4IP1 (ENSPSMG00000003357) #26	CRYBG1 (ENSPSMG00000003403) #27	ENSPSMG00000003411	ATG5 (ENSPSMG00000003484) #28	PRDM1 (ENSPSMG00000003598) #29	PREP (ENSPSMG00000003663) #30	POPDC3 (ENSPSMG00000003691) #31	BVES (ENSPSMG00000003702) #32	LIN28B (ENSPSMG00000003723) #33	HACE1 (ENSPSMG00000003828) #34
Mouse lemur	MODERN SPECIES	28	PPIL6 (ENSMICG00000014430)	CD164 (ENSMICG00000014422)	ENSMICG00000014404	CEP57L1 (ENSMICG00000014373)	SESN1 (ENSMICG00000038030)	ENSMICG00000042143	ENSMICG00000035769 #13	AFG1L (ENSMICG00000014294) #14	ENSMICG00000004669	SNX3 (ENSMICG00000043331) #16	NR2E1 (ENSMICG00000014274) #17	OSTM1 (ENSMICG00000027511) #18	SEC63 (ENSMICG00000014221) #19	SCML4 (ENSMICG00000004168) #20	SOBP (ENSMICG00000030144) #21	PDSS2 (ENSMICG00000032777) #22	BEND3 (ENSMICG00000043137) #23	ENSMICG00000004137	ENSMICG00000011517 #24	ENSMICG00000029426	QRSL1 (ENSMICG00000015754) #25	RTN4IP1 (ENSMICG00000015741) #26	CRYBG1 (ENSMICG00000030885) #27	ATG5 (ENSMICG00000010334) #28	PRDM1 (ENSMICG00000010329) #29	PREP (ENSMICG00000000906) #30	POPDC3 (ENSMICG00000045084) #31	BVES (ENSMICG00000041560) #32	LIN28B (ENSMICG00000047923) #33	HACE1 (ENSMICG00000002280) #34	ENSMICG00000046073
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Tree shrew	MODERN SPECIES	5440															ENSTBEG00000005753	PDSS2 (ENSTBEG00000005164) #22	BEND3 (ENSTBEG00000003684) #23	MTRES1 (ENSTBEG00000003521)
Glires	ANCESTRAL SPECIES	5	ENSGT00390000007445	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00940000165257	ENSGT00940000164734	ENSGT00390000002042	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000010020	ENSGT00390000009366	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Rabbit	MODERN SPECIES	3	CD164 (ENSOCUG00000029127)	ENSOCUG00000006035	CEP57L1 (ENSOCUG00000023847)	SESN1 (ENSOCUG00000011814)	ARMC2 (ENSOCUG00000011789)	ENSOCUG00000010471 #13	AFG1L (ENSOCUG00000005862) #14	SNX3 (ENSOCUG00000005858) #16	NR2E1 (ENSOCUG00000005853) #17	OSTM1 (ENSOCUG00000016073) #18	SEC63 (ENSOCUG00000016430) #19	ENSOCUG00000035467 #20	ENSOCUG00000013095 #20	SOBP (ENSOCUG00000027804) #21	ENSOCUG00000030811 #21	PDSS2 (ENSOCUG00000011259) #22	BEND3 (ENSOCUG00000011254) #23	ENSOCUG00000030127	MTRES1 (ENSOCUG00000011248)	QRSL1 (ENSOCUG00000028175) #25	CRYBG1 (ENSOCUG00000013366) #27	ENSOCUG00000033572	RTN4IP1 (ENSOCUG00000013383) #26	ATG5 (ENSOCUG00000013358) #28	PRDM1 (ENSOCUG00000015495) #29	PREP (ENSOCUG00000000188) #30	POPDC3 (ENSOCUG00000025973) #31	BVES (ENSOCUG00000016944) #32	LIN28B (ENSOCUG00000017850) #33	ENSOCUG00000037658 #34	ENSOCUG00000036629
Pika	MODERN SPECIES	2884														ENSOPRG00000000595 #20	SOBP (ENSOPRG00000000589) #21	PDSS2 (ENSOPRG00000000582) #22
Rodentia	ANCESTRAL SPECIES	6	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Hystricomorpha	ANCESTRAL SPECIES	41	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Hystricomorpha_a	ANCESTRAL SPECIES	46	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Hystricomorpha_b	ANCESTRAL SPECIES	41	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Long-tailed chinchilla	MODERN SPECIES	118	PPIL6 (ENSCLAG00000009714)	CD164 (ENSCLAG00000009279)	ENSCLAG00000009929	CEP57L1 (ENSCLAG00000010353)	SESN1 (ENSCLAG00000012296)	ENSCLAG00000009751	ENSCLAG00000009801	ENSCLAG00000010630 #13	AFG1L (ENSCLAG00000012599) #14	SNX3 (ENSCLAG00000011964) #16	NR2E1 (ENSCLAG00000017092) #17	OSTM1 (ENSCLAG00000014636) #18	SEC63 (ENSCLAG00000010535) #19	SCML4 (ENSCLAG00000009941) #20	SOBP (ENSCLAG00000009567) #21	PDSS2 (ENSCLAG00000011033) #22	BEND3 (ENSCLAG00000009701) #23	MTRES1 (ENSCLAG00000017356)	CD24 (ENSCLAG00000011622) #24	QRSL1 (ENSCLAG00000017367) #25	RTN4IP1 (ENSCLAG00000014920) #26	CRYBG1 (ENSCLAG00000009357) #27	ATG5 (ENSCLAG00000012682) #28	PRDM1 (ENSCLAG00000011847) #29	PREP (ENSCLAG00000014176) #30	POPDC3 (ENSCLAG00000011005) #31	BVES (ENSCLAG00000010963) #32	LIN28B (ENSCLAG00000010534) #33	HACE1 (ENSCLAG00000016992) #34	GRIK2 (ENSCLAG00000011506)	ASCC3 (ENSCLAG00000009794)
Guinea pig	MODERN SPECIES	63	SMPD2 (ENSCPOG00000003102)	PPIL6 (ENSCPOG00000003098)	CD164 (ENSCPOG00000034850)	ENSCPOG00000012574	CEP57L1 (ENSCPOG00000035572)	SESN1 (ENSCPOG00000013793)	ARMC2 (ENSCPOG00000006505)	ENSCPOG00000021906 #13	AFG1L (ENSCPOG00000011326) #14	SNX3 (ENSCPOG00000032088) #16	NR2E1 (ENSCPOG00000000097) #17	OSTM1 (ENSCPOG00000010183) #18	SEC63 (ENSCPOG00000002486) #19	SCML4 (ENSCPOG00000012909) #20	SOBP (ENSCPOG00000012904) #21	PDSS2 (ENSCPOG00000009293) #22	BEND3 (ENSCPOG00000036541) #23	MTRES1 (ENSCPOG00000003134)	QRSL1 (ENSCPOG00000021670) #25	RTN4IP1 (ENSCPOG00000007055) #26	ENSCPOG00000003512 #27	ATG5 (ENSCPOG00000014065) #28	PRDM1 (ENSCPOG00000014064) #29	PREP (ENSCPOG00000012377) #30	POPDC3 (ENSCPOG00000040175) #31	BVES (ENSCPOG00000034314) #32	LIN28B (ENSCPOG00000006178) #33	HACE1 (ENSCPOG00000001068) #34	GRIK2 (ENSCPOG00000001674)	ASCC3 (ENSCPOG00000013989)	SIM1 (ENSCPOG00000013987)
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000013638	ENSHGLG00000002635	ENSHGLG00000033612	ENSHGLG00000048021	ENSHGLG00000002946 #13	AFG1L (ENSHGLG00000003193) #14	ENSHGLG00000035411	ENSHGLG00000003277 #16	NR2E1 (ENSHGLG00000003792) #17	OSTM1 (ENSHGLG00000012295) #18	ENSHGLG00000041350	SEC63 (ENSHGLG00000012594) #19	ENSHGLG00000048253	SCML4 (ENSHGLG00000013722) #20	SOBP (ENSHGLG00000006724) #21	PDSS2 (ENSHGLG00000002304) #22	BEND3 (ENSHGLG00000002571) #23	ENSHGLG00000002930	ENSHGLG00000045391	ENSHGLG00000003147 #24	ENSHGLG00000034826	QRSL1 (ENSHGLG00000003294) #25	RTN4IP1 (ENSHGLG00000005284) #26	CRYBG1 (ENSHGLG00000002704) #27	ATG5 (ENSHGLG00000003994) #28	ENSHGLG00000004528 #29	ENSHGLG00000006497	ENSHGLG00000009582	ENSHGLG00000032977	ENSHGLG00000041910	ENSHGLG00000044554
Sciuridae	ANCESTRAL SPECIES	1	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Marmotini	ANCESTRAL SPECIES	11	ENSGT01030000235833	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.u.a.b #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00390000016836.b.d
Marmotini_b	ANCESTRAL SPECIES	86	ENSGT00940000165946	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.u.a.b #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00390000016836.b.d
Arctic ground squirrel	MODERN SPECIES	70	PPIL6 (ENSUPAG00010011347)	ENSUPAG00010011356	ENSUPAG00010011362	CEP57L1 (ENSUPAG00010011576)	SESN1 (ENSUPAG00010011586)	ARMC2 (ENSUPAG00010011607)	ENSUPAG00010011642 #13	AFG1L (ENSUPAG00010011647) #14	SNX3 (ENSUPAG00010011668) #16	NR2E1 (ENSUPAG00010011686) #17	OSTM1 (ENSUPAG00010011701) #18	SEC63 (ENSUPAG00010011708) #19	SCML4 (ENSUPAG00010011728) #20	ENSUPAG00010011737	SOBP (ENSUPAG00010011741) #21	PDSS2 (ENSUPAG00010011770) #22	MTRES1 (ENSUPAG00010011795)	ENSUPAG00010011806 #24	ENSUPAG00010011822	QRSL1 (ENSUPAG00010011831) #25	RTN4IP1 (ENSUPAG00010011859) #26	CRYBG1 (ENSUPAG00010011893) #27	ENSUPAG00010012436	ATG5 (ENSUPAG00010012440) #28	PRDM1 (ENSUPAG00010012448) #29	PREP (ENSUPAG00010012470) #30	POPDC3 (ENSUPAG00010012491) #31	BVES (ENSUPAG00010012511) #32	ENSUPAG00010012519	LIN28B (ENSUPAG00010012532) #33	HACE1 (ENSUPAG00010012542) #34
Squirrel	MODERN SPECIES	164	PPIL6 (ENSSTOG00000011426)	ENSSTOG00000011417	CEP57L1 (ENSSTOG00000019505)	SESN1 (ENSSTOG00000011391)	ENSSTOG00000000896	ENSSTOG00000032092	ENSSTOG00000021457	ENSSTOG00000022339 #13	AFG1L (ENSSTOG00000001115) #14	SNX3 (ENSSTOG00000007274) #16	NR2E1 (ENSSTOG00000007248) #17	ENSSTOG00000012195 #18	SEC63 (ENSSTOG00000009628) #19	SCML4 (ENSSTOG00000004682) #20	SOBP (ENSSTOG00000025137) #21	PDSS2 (ENSSTOG00000015790) #22	BEND3 (ENSSTOG00000026766) #23	MTRES1 (ENSSTOG00000015779)	ENSSTOG00000030850 #24	QRSL1 (ENSSTOG00000009177) #25	RTN4IP1 (ENSSTOG00000009165) #26	CRYBG1 (ENSSTOG00000026542) #27	ATG5 (ENSSTOG00000016507) #28	PRDM1 (ENSSTOG00000016505) #29	PREP (ENSSTOG00000023845) #30	POPDC3 (ENSSTOG00000003846) #31	BVES (ENSSTOG00000003822) #32	LIN28B (ENSSTOG00000002692) #33	HACE1 (ENSSTOG00000028610) #34	ENSSTOG00000025714
Alpin marmot	MODERN SPECIES	2	SMPD2 (ENSMMMG00000014360)	PPIL6 (ENSMMMG00000014353)	ENSMMMG00000014239	ENSMMMG00000014119	CEP57L1 (ENSMMMG00000014071)	SESN1 (ENSMMMG00000014034)	ARMC2 (ENSMMMG00000013988)	ENSMMMG00000013982	ENSMMMG00000013964 #13	AFG1L (ENSMMMG00000013948) #14	ENSMMMG00000013918 #16	NR2E1 (ENSMMMG00000013897) #17	OSTM1 (ENSMMMG00000013885) #18	SEC63 (ENSMMMG00000013834) #19	SCML4 (ENSMMMG00000013821) #20	PDSS2 (ENSMMMG00000013802) #22	BEND3 (ENSMMMG00000013770) #23	MTRES1 (ENSMMMG00000013762)	ENSMMMG00000013748 #24	QRSL1 (ENSMMMG00000013712) #25	RTN4IP1 (ENSMMMG00000013695) #26	ENSMMMG00000013691	CRYBG1 (ENSMMMG00000012703) #27	ATG5 (ENSMMMG00000012672) #28	PRDM1 (ENSMMMG00000012643) #29	PREP (ENSMMMG00000012625) #30	POPDC3 (ENSMMMG00000012617) #31	BVES (ENSMMMG00000012613) #32	ENSMMMG00000012601	HACE1 (ENSMMMG00000012570) #34	ENSMMMG00000012563
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005015947	ENSSVLG00005016041	CEP57L1 (ENSSVLG00005016399)	SESN1 (ENSSVLG00005016522)	ARMC2 (ENSSVLG00005016787)	ENSSVLG00005006650 #13	AFG1L (ENSSVLG00005006691) #14	ENSSVLG00005006775	ENSSVLG00005006799	SNX3 (ENSSVLG00005006830) #16	NR2E1 (ENSSVLG00005006886) #17	OSTM1 (ENSSVLG00005006950) #18	SEC63 (ENSSVLG00005006987) #19	SCML4 (ENSSVLG00005007050) #20	SOBP (ENSSVLG00005007145) #21	PDSS2 (ENSSVLG00005007210) #22	BEND3 (ENSSVLG00005007266) #23	MTRES1 (ENSSVLG00005007294)	ENSSVLG00005007327	QRSL1 (ENSSVLG00005007356) #25	RTN4IP1 (ENSSVLG00005007400) #26	CRYBG1 (ENSSVLG00005007465) #27	ENSSVLG00005007633	ATG5 (ENSSVLG00005007670) #28	PRDM1 (ENSSVLG00005007837) #29	PREP (ENSSVLG00005007952) #30	POPDC3 (ENSSVLG00005007986) #31	BVES (ENSSVLG00005008016) #32	ENSSVLG00005008028	LIN28B (ENSSVLG00005008061) #33	HACE1 (ENSSVLG00005008141) #34
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Kangaroo rat	MODERN SPECIES	381	Ccdc162 (ENSDORG00000025217)	Cep57l1 (ENSDORG00000016514)	Sesn1 (ENSDORG00000016747)	Armc2 (ENSDORG00000016746)	Foxo3 (ENSDORG00000029794) #13	Afg1l (ENSDORG00000014557) #14	ENSDORG00000027527	Snx3 (ENSDORG00000024533) #16	ENSDORG00000007523 #17	Ostm1 (ENSDORG00000025626) #18	Sec63 (ENSDORG00000002266) #19	ENSDORG00000012141 #20	ENSDORG00000028096 #20	ENSDORG00000030234 #21	ENSDORG00000023606	Pdss2 (ENSDORG00000001388) #22	Bend3 (ENSDORG00000013215) #23	Mtres1 (ENSDORG00000014894)	ENSDORG00000024012 #24	Qrsl1 (ENSDORG00000007837) #25	Rtn4ip1 (ENSDORG00000007834) #26	ENSDORG00000015211 #27	ENSDORG00000024871 #28	Prdm1 (ENSDORG00000014237) #29	Prep (ENSDORG00000001108) #30	Popdc3 (ENSDORG00000024694) #31	Bves (ENSDORG00000006341) #32	ENSDORG00000009587 #33	Hace1 (ENSDORG00000012054) #34	Grik2 (ENSDORG00000015175)	Ascc3 (ENSDORG00000008572)
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Lesser Egyptian jerboa	MODERN SPECIES	78	Cd164 (ENSJJAG00000016224)	Ccdc162 (ENSJJAG00000016412)	ENSJJAG00000022720	Sesn1 (ENSJJAG00000017360)	ENSJJAG00000010323	ENSJJAG00000013525	Foxo3 (ENSJJAG00000002701) #13	Afg1l (ENSJJAG00000009959) #14	Snx3 (ENSJJAG00000021440) #16	Nr2e1 (ENSJJAG00000022055) #17	ENSJJAG00000018243 #18	Sec63 (ENSJJAG00000015157) #19	Scml4 (ENSJJAG00000010133) #20	Sobp (ENSJJAG00000013825) #21	ENSJJAG00000013046	Pdss2 (ENSJJAG00000018660) #22	Bend3 (ENSJJAG00000015264) #23	Mtres1 (ENSJJAG00000023519)	Qrsl1 (ENSJJAG00000012030) #25	Rtn4ip1 (ENSJJAG00000016075) #26	ENSJJAG00000017114 #27	Atg5 (ENSJJAG00000015537) #28	Prdm1 (ENSJJAG00000023075) #29	Prep (ENSJJAG00000020209) #30	Popdc3 (ENSJJAG00000014670) #31	Bves (ENSJJAG00000012371) #32	Lin28b (ENSJJAG00000011024) #33	Hace1 (ENSJJAG00000013574) #34	ENSJJAG00000000658	ENSJJAG00000023039	Grik2 (ENSJJAG00000019973)
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00940000168689	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Prairie vole	MODERN SPECIES	358	Ppil6 (ENSMOCG00000007659)	Cd164 (ENSMOCG00000013486)	Ccdc162 (ENSMOCG00000020202)	Cep57l1 (ENSMOCG00000006001)	Sesn1 (ENSMOCG00000014884)	Armc2 (ENSMOCG00000008778)	Foxo3 (ENSMOCG00000013546) #13	Afg1l (ENSMOCG00000022771) #14	Snx3 (ENSMOCG00000020843) #16	Nr2e1 (ENSMOCG00000003990) #17	Ostm1 (ENSMOCG00000021275) #18	Sec63 (ENSMOCG00000012910) #19	Scml4 (ENSMOCG00000004057) #20	Sobp (ENSMOCG00000019494) #21	ENSMOCG00000020152	Pdss2 (ENSMOCG00000002520) #22	Bend3 (ENSMOCG00000007344) #23	Mtres1 (ENSMOCG00000016820)	ENSMOCG00000019641	Cd24a (ENSMOCG00000004145) #24	Qrsl1 (ENSMOCG00000015511) #25	Rtn4ip1 (ENSMOCG00000022655) #26	Crybg1 (ENSMOCG00000017311) #27	ENSMOCG00000019458	ENSMOCG00000021295	ENSMOCG00000012673	Rsph4a (ENSMOCG00000015792)	Zup1 (ENSMOCG00000007844)	ENSMOCG00000016429	Fam162b (ENSMOCG00000016808)	Gprc6a (ENSMOCG00000001619)
Northern American deer mouse	MODERN SPECIES	7	Smpd2 (ENSPEMG00000018109)	Ppil6 (ENSPEMG00000005372)	ENSPEMG00000025622	ENSPEMG00000010187	Cep57l1 (ENSPEMG00000011459)	Sesn1 (ENSPEMG00000012311)	Armc2 (ENSPEMG00000011502)	Foxo3 (ENSPEMG00000017580) #13	Afg1l (ENSPEMG00000016981) #14	ENSPEMG00000001898 #16	Nr2e1 (ENSPEMG00000014789) #17	Ostm1 (ENSPEMG00000001749) #18	Sec63 (ENSPEMG00000018907) #19	Scml4 (ENSPEMG00000017707) #20	Sobp (ENSPEMG00000026852) #21	Pdss2 (ENSPEMG00000010336) #22	Bend3 (ENSPEMG00000031300) #23	Mtres1 (ENSPEMG00000019114)	ENSPEMG00000029014 #24	ENSPEMG00000009329	Qrsl1 (ENSPEMG00000009855) #25	Rtn4ip1 (ENSPEMG00000009749) #26	Crybg1 (ENSPEMG00000006428) #27	Atg5 (ENSPEMG00000023746) #28	Prdm1 (ENSPEMG00000023622) #29	Prep (ENSPEMG00000015306) #30	Popdc3 (ENSPEMG00000012534) #31	Bves (ENSPEMG00000014540) #32	Lin28b (ENSPEMG00000015724) #33	Hace1 (ENSPEMG00000006907) #34	ENSPEMG00000025768
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00390000009166	ENSGT00940000159634	ENSGT00530000063929.a.a	ENSGT00940000163170	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654
Chinese hamster chok1gshd	MODERN SPECIES	160	Ppil6 (ENSCGRG00001020658)	Cd164 (ENSCGRG00001020972)	ENSCGRG00001022426	Cep57l1 (ENSCGRG00001000573)	Sesn1 (ENSCGRG00001004292)	Armc2 (ENSCGRG00001011760)	Foxo3 (ENSCGRG00001017319) #13	ENSCGRG00001018045	Afg1l (ENSCGRG00001021263) #14	ENSCGRG00001021917 #16	Nr2e1 (ENSCGRG00001022746) #17	Ostm1 (ENSCGRG00001023136) #18	Sec63 (ENSCGRG00001023456) #19	Scml4 (ENSCGRG00001000202) #20	Sobp (ENSCGRG00001000885) #21	Pdss2 (ENSCGRG00001005143) #22	ENSCGRG00001006245	Bend3 (ENSCGRG00001006904) #23	Mtres1 (ENSCGRG00001007384)	ENSCGRG00001008340 #24	QRSL1 (ENSCGRG00001008633) #25	Rtn4ip1 (ENSCGRG00001010026) #26	Crybg1 (ENSCGRG00001010879) #27	ENSCGRG00001015093
Golden Hamster	MODERN SPECIES	655	Ppil6 (ENSMAUG00000002966)	Cd164 (ENSMAUG00000021208)	ENSMAUG00000019439	ENSMAUG00000014530	Cep57l1 (ENSMAUG00000014039)	Sesn1 (ENSMAUG00000018424)	Armc2 (ENSMAUG00000012693)	Foxo3 (ENSMAUG00000013798) #13	Afg1l (ENSMAUG00000009033) #14	Snx3 (ENSMAUG00000006058) #16	Nr2e1 (ENSMAUG00000013609) #17	Ostm1 (ENSMAUG00000022061) #18	Sec63 (ENSMAUG00000021173) #19	Scml4 (ENSMAUG00000016828) #20	Sobp (ENSMAUG00000003509) #21	Pdss2 (ENSMAUG00000006752) #22	Bend3 (ENSMAUG00000021184) #23	Mtres1 (ENSMAUG00000015280)	ENSMAUG00000020710 #24	Qrsl1 (ENSMAUG00000016387) #25	Rtn4ip1 (ENSMAUG00000001630) #26	Crybg1 (ENSMAUG00000017911) #27
Murinae	ANCESTRAL SPECIES	36	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00950000186137	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00900000143654	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Mus	ANCESTRAL SPECIES	15	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610	ENSGT00940000155377
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829 #24	ENSGT00900000143316	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.o #24	ENSGT00900000143316	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Mouse	MODERN SPECIES	1	Smpd2 (ENSMUSG00000019822)	Ppil6 (ENSMUSG00000078451)	Cd164 (ENSMUSG00000019818)	Ccdc162 (ENSMUSG00000075225)	Cep57l1 (ENSMUSG00000019813)	Sesn1 (ENSMUSG00000038332)	Armc2 (ENSMUSG00000071324)	Foxo3 (ENSMUSG00000048756) #13	Afg1l (ENSMUSG00000038302) #14	Snx3 (ENSMUSG00000019804) #16	Nr2e1 (ENSMUSG00000019803) #17	Ostm1 (ENSMUSG00000038280) #18	Sec63 (ENSMUSG00000019802) #19	Scml4 (ENSMUSG00000044770) #20	Sobp (ENSMUSG00000038248) #21	Pdss2 (ENSMUSG00000038240) #22	Bend3 (ENSMUSG00000038214) #23	Pam16l (ENSMUSG00000045886)	Mtres1 (ENSMUSG00000019797)	Cd24a (ENSMUSG00000047139) #24	Qrsl1 (ENSMUSG00000019863) #25	Rtn4ip1 (ENSMUSG00000019864) #26	Crybg1 (ENSMUSG00000019866) #27	Atg5 (ENSMUSG00000038160) #28	Prdm1 (ENSMUSG00000038151) #29	Prep (ENSMUSG00000019849) #30	Popdc3 (ENSMUSG00000019848) #31	Bves (ENSMUSG00000071317) #32	Lin28b (ENSMUSG00000063804) #33	Hace1 (ENSMUSG00000038822) #34	Grik2 (ENSMUSG00000056073)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000163170	ENSGT00940000165946	ENSGT00390000007445	ENSGT00530000063695.b	ENSGT00950000183168.B.b	ENSGT00390000000663	ENSGT00940000159826 #13	ENSGT00390000013227.a.a #14	ENSGT00940000153609.b #16	ENSGT00940000156693 #17	ENSGT00390000012341 #18	ENSGT00390000001965 #19	ENSGT00940000157463 #20	ENSGT00940000154164.c #21	ENSGT01100000264286	ENSGT00940000153498.B.b #22	ENSGT00390000010827 #23	ENSGT00390000009366	ENSGT00390000018829.o #24	ENSGT00900000143316	ENSGT00550000074866 #25	ENSGT00880000138028.b.b #26	ENSGT00940000155695 #27	ENSGT00390000004766 #28	ENSGT00940000154798.a.d.a #29	ENSGT00530000063426.b.b #30	ENSGT00390000002563.b.a.a #31	ENSGT00390000002563.a #32	ENSGT00940000153295.b #33	ENSGT00940000155839 #34	ENSGT00940000155610
Steppe mouse	MODERN SPECIES	3355	Ppil6 (ENSMSIG00000030455)	Cd164 (ENSMSIG00000030453)	Ccdc162 (ENSMSIG00000030406)	Cep57l1 (ENSMSIG00000030394)	Sesn1 (ENSMSIG00000030386)	Armc2 (ENSMSIG00000030380)	Foxo3 (ENSMSIG00000030372) #13	Afg1l (ENSMSIG00000030363) #14	ENSMSIG00000030359 #16	Nr2e1 (ENSMSIG00000030352) #17	Ostm1 (ENSMSIG00000030347) #18	Sec63 (ENSMSIG00000030343) #19	Scml4 (ENSMSIG00000030317) #20	Sobp (ENSMSIG00000030314) #21	ENSMSIG00000030312	Pdss2 (ENSMSIG00000030310) #22	Bend3 (ENSMSIG00000030306) #23	Mtres1 (ENSMSIG00000030303)	ENSMSIG00000030302 #24	ENSMSIG00000030301	Qrsl1 (ENSMSIG00000030298) #25	Rtn4ip1 (ENSMSIG00000030296) #26	Crybg1 (ENSMSIG00000030293) #27	ENSMSIG00000030292	Atg5 (ENSMSIG00000030288) #28	Prdm1 (ENSMSIG00000030278) #29	ENSMSIG00000030269 #30	Popdc3 (ENSMSIG00000030266) #31	Bves (ENSMSIG00000030263) #32	Lin28b (ENSMSIG00000030258) #33	Hace1 (ENSMSIG00000030256) #34
spretus	MODERN SPECIES	1	MGP_SPRETEiJ_G0016080	MGP_SPRETEiJ_G0016081	MGP_SPRETEiJ_G0016082	Cep57l1 (MGP_SPRETEiJ_G0016083)	Sesn1 (MGP_SPRETEiJ_G0016084)	Armc2 (MGP_SPRETEiJ_G0016085)	Foxo3 (MGP_SPRETEiJ_G0016086) #13	Afg1l (MGP_SPRETEiJ_G0016087) #14	Snx3 (MGP_SPRETEiJ_G0016088) #16	Nr2e1 (MGP_SPRETEiJ_G0016089) #17	Ostm1 (MGP_SPRETEiJ_G0016090) #18	Sec63 (MGP_SPRETEiJ_G0016091) #19	Scml4 (MGP_SPRETEiJ_G0016092) #20	Sobp (MGP_SPRETEiJ_G0016093) #21	MGP_SPRETEiJ_G0016094	Pdss2 (MGP_SPRETEiJ_G0016095) #22	Bend3 (MGP_SPRETEiJ_G0016096) #23	Mtres1 (MGP_SPRETEiJ_G0016097)	MGP_SPRETEiJ_G0016098 #24	MGP_SPRETEiJ_G0016099	Qrsl1 (MGP_SPRETEiJ_G0016100) #25	Rtn4ip1 (MGP_SPRETEiJ_G0016101) #26	Crybg1 (MGP_SPRETEiJ_G0016102) #27	Atg5 (MGP_SPRETEiJ_G0016103) #28	Prdm1 (MGP_SPRETEiJ_G0016104) #29	Prep (MGP_SPRETEiJ_G0016105) #30	Popdc3 (MGP_SPRETEiJ_G0016106) #31	Bves (MGP_SPRETEiJ_G0016107) #32	Lin28b (MGP_SPRETEiJ_G0016108) #33	Hace1 (MGP_SPRETEiJ_G0016109) #34	Grik2 (MGP_SPRETEiJ_G0016110)
Ryukyu mouse	MODERN SPECIES	1	MGP_CAROLIEiJ_G0015271	MGP_CAROLIEiJ_G0015272	MGP_CAROLIEiJ_G0015273	Cep57l1 (MGP_CAROLIEiJ_G0015274)	Sesn1 (MGP_CAROLIEiJ_G0015275)	Armc2 (MGP_CAROLIEiJ_G0015276)	Foxo3 (MGP_CAROLIEiJ_G0015277) #13	Afg1l (MGP_CAROLIEiJ_G0015278) #14	Snx3 (MGP_CAROLIEiJ_G0015279) #16	Nr2e1 (MGP_CAROLIEiJ_G0015280) #17	Ostm1 (MGP_CAROLIEiJ_G0015281) #18	Sec63 (MGP_CAROLIEiJ_G0015282) #19	Scml4 (MGP_CAROLIEiJ_G0015283) #20	Sobp (MGP_CAROLIEiJ_G0015284) #21	MGP_CAROLIEiJ_G0015285	Pdss2 (MGP_CAROLIEiJ_G0015286) #22	Bend3 (MGP_CAROLIEiJ_G0015287) #23	Mtres1 (MGP_CAROLIEiJ_G0015288)	MGP_CAROLIEiJ_G0015289 #24	MGP_CAROLIEiJ_G0015290	Qrsl1 (MGP_CAROLIEiJ_G0015291) #25	Rtn4ip1 (MGP_CAROLIEiJ_G0015292) #26	Crybg1 (MGP_CAROLIEiJ_G0015293) #27	Atg5 (MGP_CAROLIEiJ_G0015294) #28	Prdm1 (MGP_CAROLIEiJ_G0015295) #29	Prep (MGP_CAROLIEiJ_G0015296) #30	Popdc3 (MGP_CAROLIEiJ_G0015297) #31	Bves (MGP_CAROLIEiJ_G0015298) #32	Lin28b (MGP_CAROLIEiJ_G0015299) #33	Hace1 (MGP_CAROLIEiJ_G0015300) #34	Grik2 (MGP_CAROLIEiJ_G0015301)
Shrew mouse	MODERN SPECIES	22	MGP_PahariEiJ_G0030689	MGP_PahariEiJ_G0030690	MGP_PahariEiJ_G0030691	Cep57l1 (MGP_PahariEiJ_G0030692)	Sesn1 (MGP_PahariEiJ_G0030693)	Armc2 (MGP_PahariEiJ_G0030694)	Foxo3 (MGP_PahariEiJ_G0030695) #13	Afg1l (MGP_PahariEiJ_G0030696) #14	Snx3 (MGP_PahariEiJ_G0030697) #16	Nr2e1 (MGP_PahariEiJ_G0030698) #17	Ostm1 (MGP_PahariEiJ_G0030699) #18	Sec63 (MGP_PahariEiJ_G0030700) #19	Scml4 (MGP_PahariEiJ_G0030701) #20	Sobp (MGP_PahariEiJ_G0030702) #21	MGP_PahariEiJ_G0030703	Pdss2 (MGP_PahariEiJ_G0030704) #22	Bend3 (MGP_PahariEiJ_G0030705) #23	Mtres1 (MGP_PahariEiJ_G0030706)	MGP_PahariEiJ_G0030707	Qrsl1 (MGP_PahariEiJ_G0030708) #25	Rtn4ip1 (MGP_PahariEiJ_G0030709) #26	Crybg1 (MGP_PahariEiJ_G0030710) #27	Atg5 (MGP_PahariEiJ_G0030711) #28	Prdm1 (MGP_PahariEiJ_G0030712) #29	Prep (MGP_PahariEiJ_G0030713) #30	Popdc3 (MGP_PahariEiJ_G0030714) #31	Bves (MGP_PahariEiJ_G0030715) #32	Lin28b (MGP_PahariEiJ_G0030716) #33	Hace1 (MGP_PahariEiJ_G0030717) #34	Grik2 (MGP_PahariEiJ_G0030718)	Ascc3 (MGP_PahariEiJ_G0030719)
Rat	MODERN SPECIES	12	Cep57l1 (ENSRNOG00000000303)	Sesn1 (ENSRNOG00000000302)	LOC499469 (ENSRNOG00000049990)	Armc2 (ENSRNOG00000026217)	Foxo3 (ENSRNOG00000000299) #13	Afg1l (ENSRNOG00000043033) #14	Snx3 (ENSRNOG00000046705) #16	Nr2e1 (ENSRNOG00000050550) #17	Ostm1 (ENSRNOG00000037647) #18	ENSRNOG00000062845	Sec63 (ENSRNOG00000000314) #19	Scml4 (ENSRNOG00000026110) #20	ENSRNOG00000069773	Sobp (ENSRNOG00000000316) #21	LOC688390 (ENSRNOG00000026080)	Pdss2 (ENSRNOG00000042962) #22	Rpl37a-ps5 (ENSRNOG00000032964)	Bend3 (ENSRNOG00000046505) #23	Mtres1 (ENSRNOG00000047118)	AABR07045462.1 (ENSRNOG00000000320)	Cd24 (ENSRNOG00000000321) #24	Qrsl1 (ENSRNOG00000026049) #25	Rtn4ip1 (ENSRNOG00000000279) #26	Crybg1 (ENSRNOG00000025998) #27	AABR07045487.1 (ENSRNOG00000037628)	Atg5 (ENSRNOG00000000322) #28	Prdm1 (ENSRNOG00000000323) #29	Prep (ENSRNOG00000051061) #30	Popdc3 (ENSRNOG00000047102) #31	Bves (ENSRNOG00000043199) #32	Lin28b (ENSRNOG00000025938) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	1522									Afg1l (ENSNGAG00000004401) #14	Snx3 (ENSNGAG00000023818) #16	Nr2e1 (ENSNGAG00000021311) #17	Ostm1 (ENSNGAG00000024096) #18	ENSNGAG00000022978 #19	Scml4 (ENSNGAG00000021906) #20	Sobp (ENSNGAG00000001438) #21	Pdss2 (ENSNGAG00000022824) #22	Bend3 (ENSNGAG00000021369) #23	Mtres1 (ENSNGAG00000015067)	ENSNGAG00000022212	ENSNGAG00000022687 #24	Qrsl1 (ENSNGAG00000023213) #25	Rtn4ip1 (ENSNGAG00000022333) #26	Crybg1 (ENSNGAG00000010488) #27	Atg5 (ENSNGAG00000017886) #28	Prdm1 (ENSNGAG00000022787) #29	Prep (ENSNGAG00000024271) #30	Popdc3 (ENSNGAG00000024046) #31	Bves (ENSNGAG00000024027) #32	Lin28b (ENSNGAG00000022808) #33	Hace1 (ENSNGAG00000017799) #34