Mus	ANCESTRAL SPECIES	7	ENSGT00940000155893.b #8	ENSGT00950000183039.B.b.a #9	ENSGT00730000111202 #10	ENSGT00940000155531.b #11	ENSGT00950000183039.B.a #12	ENSGT00940000156335 #13	ENSGT00390000013727.d #14	ENSGT01000000214413.b.a.a #15	ENSGT00940000156305 #16	ENSGT00390000002837 #17	ENSGT00390000009980 #18	ENSGT00940000157401 #19	ENSGT00940000155931 #20	ENSGT00390000013701 #21	ENSGT00390000015010	ENSGT00950000183189.a.b.a #22	ENSGT00940000154384.h.b.f #23	ENSGT00940000160614 #24	ENSGT00940000156162.C.k	ENSGT00940000154552.b #25	ENSGT00940000156941	ENSGT00940000153661.a.a	ENSGT00940000157312	ENSGT00950000183169.C #26	ENSGT00940000155988 #28	ENSGT00860000136163 #29	ENSGT01010000222815	ENSGT00950000183130.A #30	ENSGT00940000155372 #31	ENSGT00390000012346 #32	ENSGT01060000248588.a.c.b #33
Shrew mouse	MODERN SPECIES	17	Cldn11 (MGP_PahariEiJ_G0026356) #7	Slc7a14 (MGP_PahariEiJ_G0026357) #8	Kcnmb2 (MGP_PahariEiJ_G0026358) #9	Zmat3 (MGP_PahariEiJ_G0026359) #10	Pik3ca (MGP_PahariEiJ_G0026360) #11	Kcnmb3 (MGP_PahariEiJ_G0026361) #12	Zfp639 (MGP_PahariEiJ_G0026362) #13	Mfn1 (MGP_PahariEiJ_G0026363) #14	Gnb4 (MGP_PahariEiJ_G0026364) #15	Actl6a (MGP_PahariEiJ_G0026365) #16	Mrpl47 (MGP_PahariEiJ_G0026366) #17	Ndufb5 (MGP_PahariEiJ_G0026367) #18	Usp13 (MGP_PahariEiJ_G0026368) #19	Pex5l (MGP_PahariEiJ_G0026369) #20	MGP_PahariEiJ_G0026370 #21	Fxr1 (MGP_PahariEiJ_G0026371) #22	Dnajc19 (MGP_PahariEiJ_G0026372) #23	Sox2 (MGP_PahariEiJ_G0026373) #24	MGP_PahariEiJ_G0026374 #25	Zfp267 (MGP_PahariEiJ_G0026375) #26	Qrfpr (MGP_PahariEiJ_G0026376) #27	Anxa5 (MGP_PahariEiJ_G0026377) #28	MGP_PahariEiJ_G0026378 #29	Exosc9 (MGP_PahariEiJ_G0026379) #30	Ccna2 (MGP_PahariEiJ_G0026380) #31	Bbs7 (MGP_PahariEiJ_G0026381) #32	Trpc3 (MGP_PahariEiJ_G0026382) #33	Bltp1 (MGP_PahariEiJ_G0026383) #34	Adad1 (MGP_PahariEiJ_G0026384) #35	Il2 (MGP_PahariEiJ_G0026385) #36	Il21 (MGP_PahariEiJ_G0026386) #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000155893.b #8	ENSGT00950000183039.B.b.a #9	ENSGT00730000111202 #10	ENSGT00940000155531.b #11	ENSGT00950000183039.B.a #12	ENSGT00940000156335 #13	ENSGT00390000013727.d #14	ENSGT01000000214413.b.a.a #15	ENSGT00940000156305 #16	ENSGT00390000002837.y #17	ENSGT00390000009980 #18	ENSGT00940000157401 #19	ENSGT00940000155931 #20	ENSGT00390000013701 #21	ENSGT00390000015010	ENSGT00950000183189.a.b.a #22	ENSGT00940000154384.h.b.f #23	ENSGT00940000160614 #24	ENSGT00940000156162.C.k	ENSGT00940000154552.b #25	ENSGT00940000156941	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a	ENSGT00940000157312	ENSGT00950000183169.C #26	ENSGT00940000155988 #28	ENSGT00860000136163 #29	ENSGT01010000222815	ENSGT00950000183130.A #30	ENSGT00940000155372 #31	ENSGT00390000012346 #32
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000155893.b #8	ENSGT00950000183039.B.b.a #9	ENSGT00730000111202 #10	ENSGT00940000155531.b #11	ENSGT00950000183039.B.a #12	ENSGT00940000156335 #13	ENSGT00390000013727.d #14	ENSGT01000000214413.b.a.a #15	ENSGT00940000156305 #16	ENSGT00390000002837.y #17	ENSGT00390000009980 #18	ENSGT00940000157401 #19	ENSGT00940000155931 #20	ENSGT00390000013701 #21	ENSGT00390000015010	ENSGT00950000183189.a.b.a #22	ENSGT00940000154384.h.b.f #23	ENSGT00940000160614 #24	ENSGT00940000156162.C.k	ENSGT00940000154552.b #25	ENSGT00940000156941	ENSGT00940000153661.a.a	ENSGT00940000157312	ENSGT00950000183169.C #26	ENSGT00940000155988 #28	ENSGT00860000136163 #29	ENSGT01010000222815	ENSGT00950000183130.A #30	ENSGT00940000155372 #31	ENSGT00390000012346 #32	ENSGT01060000248588.a.c.b #33
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000155893.b #8	ENSGT00950000183039.B.b.a #9	ENSGT00730000111202 #10	ENSGT00940000155531.b #11	ENSGT00950000183039.B.a #12	ENSGT00940000156335 #13	ENSGT00390000013727.d #14	ENSGT01000000214413.b.a.a #15	ENSGT00940000156305 #16	ENSGT00390000002837.y #17	ENSGT00390000009980 #18	ENSGT00940000157401 #19	ENSGT00940000155931 #20	ENSGT00390000013701 #21	ENSGT00390000015010	ENSGT00950000183189.a.b.a #22	ENSGT00940000154384.h.b.f #23	ENSGT00940000160614 #24	ENSGT00940000156162.C.k	ENSGT00940000154552.b #25	ENSGT00940000156941	ENSGT00940000153661.a.a	ENSGT00940000157312	ENSGT00950000183169.C #26	ENSGT00940000155988 #28	ENSGT00860000136163 #29	ENSGT01010000222815	ENSGT00950000183130.A #30	ENSGT00940000155372 #31	ENSGT00390000012346 #32	ENSGT01060000248588.a.c.b #33
Steppe mouse	MODERN SPECIES	3029														Ttc14 (ENSMSIG00000010721) #21	Ccdc39 (ENSMSIG00000011242)	Fxr1 (ENSMSIG00000011312) #22	Dnajc19 (ENSMSIG00000012005) #23	ENSMSIG00000012275
spretus	MODERN SPECIES	12	Slc7a14 (MGP_SPRETEiJ_G0025846) #8	Kcnmb2 (MGP_SPRETEiJ_G0025847) #9	Zmat3 (MGP_SPRETEiJ_G0025848) #10	Pik3ca (MGP_SPRETEiJ_G0025849) #11	Kcnmb3 (MGP_SPRETEiJ_G0025850) #12	Zfp639 (MGP_SPRETEiJ_G0025851) #13	Mfn1 (MGP_SPRETEiJ_G0025852) #14	Gnb4 (MGP_SPRETEiJ_G0025853) #15	Actl6a (MGP_SPRETEiJ_G0025854) #16	Mrpl47 (MGP_SPRETEiJ_G0025855) #17	Ndufb5 (MGP_SPRETEiJ_G0025856) #18	Usp13 (MGP_SPRETEiJ_G0025857) #19	Pex5l (MGP_SPRETEiJ_G0025858) #20	Ttc14 (MGP_SPRETEiJ_G0025859) #21	Ccdc39 (MGP_SPRETEiJ_G0025860)	Fxr1 (MGP_SPRETEiJ_G0025861) #22	Dnajc19 (MGP_SPRETEiJ_G0025862) #23	Sox2 (MGP_SPRETEiJ_G0025863) #24	Atp11b (MGP_SPRETEiJ_G0025864)	MGP_SPRETEiJ_G0025865 #25	Mccc1 (MGP_SPRETEiJ_G0025866)	MGP_SPRETEiJ_G0025867	Acad9 (MGP_SPRETEiJ_G0025868)	Zfp267 (MGP_SPRETEiJ_G0025869) #26	Qrfpr (MGP_SPRETEiJ_G0025870) #27	Anxa5 (MGP_SPRETEiJ_G0025871) #28	MGP_SPRETEiJ_G0025872 #29	Exosc9 (MGP_SPRETEiJ_G0025873) #30	Ccna2 (MGP_SPRETEiJ_G0025874) #31	Bbs7 (MGP_SPRETEiJ_G0025875) #32	Trpc3 (MGP_SPRETEiJ_G0025876) #33
Mouse	MODERN SPECIES	12	Slc7a14 (ENSMUSG00000069072) #8	Kcnmb2 (ENSMUSG00000037610) #9	Zmat3 (ENSMUSG00000027663) #10	Pik3ca (ENSMUSG00000027665) #11	Kcnmb3 (ENSMUSG00000091091) #12	Zfp639 (ENSMUSG00000027667) #13	Mfn1 (ENSMUSG00000027668) #14	Gnb4 (ENSMUSG00000027669) #15	Actl6a (ENSMUSG00000027671) #16	Mrpl47 (ENSMUSG00000037531) #17	Ndufb5 (ENSMUSG00000027673) #18	Usp13 (ENSMUSG00000056900) #19	Pex5l (ENSMUSG00000027674) #20	Ttc14 (ENSMUSG00000027677) #21	Ccdc39 (ENSMUSG00000027676)	Fxr1 (ENSMUSG00000027680) #22	Dnajc19 (ENSMUSG00000027679) #23	Sox2 (ENSMUSG00000074637) #24	Atp11b (ENSMUSG00000037400)	Dcun1d1 (ENSMUSG00000027708) #25	Mccc1 (ENSMUSG00000027709)	Ccdc144b (ENSMUSG00000047696)	Acad9 (ENSMUSG00000027710)	Zfp267 (ENSMUSG00000033883) #26	Qrfpr (ENSMUSG00000058400) #27	Anxa5 (ENSMUSG00000027712) #28	1810062G17Rik (ENSMUSG00000027713) #29	Smim43 (ENSMUSG00000085007)	Exosc9 (ENSMUSG00000027714) #30	Ccna2 (ENSMUSG00000027715) #31	Bbs7 (ENSMUSG00000037325) #32
Ryukyu mouse	MODERN SPECIES	12	Slc7a14 (MGP_CAROLIEiJ_G0024912) #8	Kcnmb2 (MGP_CAROLIEiJ_G0024913) #9	Zmat3 (MGP_CAROLIEiJ_G0024914) #10	Pik3ca (MGP_CAROLIEiJ_G0024915) #11	Kcnmb3 (MGP_CAROLIEiJ_G0024916) #12	Zfp639 (MGP_CAROLIEiJ_G0024917) #13	MGP_CAROLIEiJ_G0024918 #14	Gnb4 (MGP_CAROLIEiJ_G0024919) #15	Actl6a (MGP_CAROLIEiJ_G0024920) #16	Mrpl47 (MGP_CAROLIEiJ_G0024921) #17	Ndufb5 (MGP_CAROLIEiJ_G0024922) #18	Usp13 (MGP_CAROLIEiJ_G0024923) #19	Pex5l (MGP_CAROLIEiJ_G0024924) #20	Ttc14 (MGP_CAROLIEiJ_G0024925) #21	Ccdc39 (MGP_CAROLIEiJ_G0024926)	Fxr1 (MGP_CAROLIEiJ_G0024927) #22	MGP_CAROLIEiJ_G0024928 #23	Sox2 (MGP_CAROLIEiJ_G0024929) #24	Atp11b (MGP_CAROLIEiJ_G0024930)	MGP_CAROLIEiJ_G0024931 #25	Mccc1 (MGP_CAROLIEiJ_G0024932)	MGP_CAROLIEiJ_G0024933	MGP_CAROLIEiJ_G0024934	Zfp267 (MGP_CAROLIEiJ_G0024935) #26	Qrfpr (MGP_CAROLIEiJ_G0024936) #27	Anxa5 (MGP_CAROLIEiJ_G0024937) #28	MGP_CAROLIEiJ_G0024938 #29	Exosc9 (MGP_CAROLIEiJ_G0024939) #30	Ccna2 (MGP_CAROLIEiJ_G0024940) #31	Bbs7 (MGP_CAROLIEiJ_G0024941) #32	Trpc3 (MGP_CAROLIEiJ_G0024942) #33