Euteleostomi ANCESTRAL SPECIES 426 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a Sarcopterygii ANCESTRAL SPECIES 26 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00950000182930.D Tetrapoda ANCESTRAL SPECIES 12 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Amniota ANCESTRAL SPECIES 13 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Mammalia ANCESTRAL SPECIES 7 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Theria ANCESTRAL SPECIES 5 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Eutheria ANCESTRAL SPECIES 5 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000164826 ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B Glires ANCESTRAL SPECIES 2 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B Rodentia ANCESTRAL SPECIES 2 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Myomorpha ANCESTRAL SPECIES 38 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.b.b ##28 Muroidea ANCESTRAL SPECIES 83 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.b.b ##28 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000164694 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.b.b ##28 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C #30 ENSGT00940000155988 #32 ENSGT01010000222815 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 Murinae ANCESTRAL SPECIES 5 ENSGT00940000164694 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C #30 ENSGT00940000155988 #32 ENSGT01010000222815 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 ENSGT00640000091487 Mus ANCESTRAL SPECIES 7 ENSGT00940000155893.b #7 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C #30 ENSGT00940000155988 #32 ENSGT00860000136163 #33 ENSGT01010000222815 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000155893.b #7 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837.y #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.b.b ##28 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C #30 ENSGT00940000155988 #32 ENSGT00860000136163 #33 ENSGT01010000222815 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000155893.b #7 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837.y #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C #30 ENSGT00940000155988 #32 ENSGT00860000136163 #33 ENSGT01010000222815 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 Mus_C ANCESTRAL SPECIES 6 ENSGT00940000155893.b #7 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837.y #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C #30 ENSGT00940000155988 #32 ENSGT00860000136163 #33 ENSGT01010000222815 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 spretus MODERN SPECIES 12 Slc7a14 (MGP_SPRETEiJ_G0025846) #7 Kcnmb2 (MGP_SPRETEiJ_G0025847) #8 Zmat3 (MGP_SPRETEiJ_G0025848) #9 Pik3ca (MGP_SPRETEiJ_G0025849) #10 Kcnmb3 (MGP_SPRETEiJ_G0025850) #11 Zfp639 (MGP_SPRETEiJ_G0025851) #12 Mfn1 (MGP_SPRETEiJ_G0025852) #13 Gnb4 (MGP_SPRETEiJ_G0025853) #14 Actl6a (MGP_SPRETEiJ_G0025854) #15 Mrpl47 (MGP_SPRETEiJ_G0025855) #16 Ndufb5 (MGP_SPRETEiJ_G0025856) #17 Usp13 (MGP_SPRETEiJ_G0025857) #18 Pex5l (MGP_SPRETEiJ_G0025858) #19 Ttc14 (MGP_SPRETEiJ_G0025859) #20 Ccdc39 (MGP_SPRETEiJ_G0025860) #21 Fxr1 (MGP_SPRETEiJ_G0025861) #22 Dnajc19 (MGP_SPRETEiJ_G0025862) #23 Sox2 (MGP_SPRETEiJ_G0025863) #24 Atp11b (MGP_SPRETEiJ_G0025864) #25 MGP_SPRETEiJ_G0025865 #26 Mccc1 (MGP_SPRETEiJ_G0025866) #27 MGP_SPRETEiJ_G0025867 #28 Acad9 (MGP_SPRETEiJ_G0025868) #29 Zfp267 (MGP_SPRETEiJ_G0025869) #30 Qrfpr (MGP_SPRETEiJ_G0025870) #31 Anxa5 (MGP_SPRETEiJ_G0025871) #32 MGP_SPRETEiJ_G0025872 #33 Exosc9 (MGP_SPRETEiJ_G0025873) #34 Ccna2 (MGP_SPRETEiJ_G0025874) #35 Bbs7 (MGP_SPRETEiJ_G0025875) #36 Trpc3 (MGP_SPRETEiJ_G0025876) #37 Steppe mouse MODERN SPECIES 3029 Ttc14 (ENSMSIG00000010721) #20 Ccdc39 (ENSMSIG00000011242) #21 Fxr1 (ENSMSIG00000011312) #22 Dnajc19 (ENSMSIG00000012005) #23 ENSMSIG00000012275 Mouse MODERN SPECIES 12 Slc7a14 (ENSMUSG00000069072) #7 Kcnmb2 (ENSMUSG00000037610) #8 Zmat3 (ENSMUSG00000027663) #9 Pik3ca (ENSMUSG00000027665) #10 Kcnmb3 (ENSMUSG00000091091) #11 Zfp639 (ENSMUSG00000027667) #12 Mfn1 (ENSMUSG00000027668) #13 Gnb4 (ENSMUSG00000027669) #14 Actl6a (ENSMUSG00000027671) #15 Mrpl47 (ENSMUSG00000037531) #16 Ndufb5 (ENSMUSG00000027673) #17 Usp13 (ENSMUSG00000056900) #18 Pex5l (ENSMUSG00000027674) #19 Ttc14 (ENSMUSG00000027677) #20 Ccdc39 (ENSMUSG00000027676) #21 Fxr1 (ENSMUSG00000027680) #22 Dnajc19 (ENSMUSG00000027679) #23 Sox2 (ENSMUSG00000074637) #24 Atp11b (ENSMUSG00000037400) #25 Dcun1d1 (ENSMUSG00000027708) #26 Mccc1 (ENSMUSG00000027709) #27 Ccdc144b (ENSMUSG00000047696) ##28 Acad9 (ENSMUSG00000027710) #29 Zfp267 (ENSMUSG00000033883) #30 Qrfpr (ENSMUSG00000058400) #31 Anxa5 (ENSMUSG00000027712) #32 1810062G17Rik (ENSMUSG00000027713) #33 Smim43 (ENSMUSG00000085007) Exosc9 (ENSMUSG00000027714) #34 Ccna2 (ENSMUSG00000027715) #35 Bbs7 (ENSMUSG00000037325) #36 Ryukyu mouse MODERN SPECIES 12 Slc7a14 (MGP_CAROLIEiJ_G0024912) #7 Kcnmb2 (MGP_CAROLIEiJ_G0024913) #8 Zmat3 (MGP_CAROLIEiJ_G0024914) #9 Pik3ca (MGP_CAROLIEiJ_G0024915) #10 Kcnmb3 (MGP_CAROLIEiJ_G0024916) #11 Zfp639 (MGP_CAROLIEiJ_G0024917) #12 MGP_CAROLIEiJ_G0024918 #13 Gnb4 (MGP_CAROLIEiJ_G0024919) #14 Actl6a (MGP_CAROLIEiJ_G0024920) #15 Mrpl47 (MGP_CAROLIEiJ_G0024921) #16 Ndufb5 (MGP_CAROLIEiJ_G0024922) #17 Usp13 (MGP_CAROLIEiJ_G0024923) #18 Pex5l (MGP_CAROLIEiJ_G0024924) #19 Ttc14 (MGP_CAROLIEiJ_G0024925) #20 Ccdc39 (MGP_CAROLIEiJ_G0024926) #21 Fxr1 (MGP_CAROLIEiJ_G0024927) #22 MGP_CAROLIEiJ_G0024928 #23 Sox2 (MGP_CAROLIEiJ_G0024929) #24 Atp11b (MGP_CAROLIEiJ_G0024930) #25 MGP_CAROLIEiJ_G0024931 #26 Mccc1 (MGP_CAROLIEiJ_G0024932) #27 MGP_CAROLIEiJ_G0024933 ##28 MGP_CAROLIEiJ_G0024934 #29 Zfp267 (MGP_CAROLIEiJ_G0024935) #30 Qrfpr (MGP_CAROLIEiJ_G0024936) #31 Anxa5 (MGP_CAROLIEiJ_G0024937) #32 MGP_CAROLIEiJ_G0024938 #33 Exosc9 (MGP_CAROLIEiJ_G0024939) #34 Ccna2 (MGP_CAROLIEiJ_G0024940) #35 Bbs7 (MGP_CAROLIEiJ_G0024941) #36 Trpc3 (MGP_CAROLIEiJ_G0024942) #37 Shrew mouse MODERN SPECIES 17 Cldn11 (MGP_PahariEiJ_G0026356) Slc7a14 (MGP_PahariEiJ_G0026357) #7 Kcnmb2 (MGP_PahariEiJ_G0026358) #8 Zmat3 (MGP_PahariEiJ_G0026359) #9 Pik3ca (MGP_PahariEiJ_G0026360) #10 Kcnmb3 (MGP_PahariEiJ_G0026361) #11 Zfp639 (MGP_PahariEiJ_G0026362) #12 Mfn1 (MGP_PahariEiJ_G0026363) #13 Gnb4 (MGP_PahariEiJ_G0026364) #14 Actl6a (MGP_PahariEiJ_G0026365) #15 Mrpl47 (MGP_PahariEiJ_G0026366) #16 Ndufb5 (MGP_PahariEiJ_G0026367) #17 Usp13 (MGP_PahariEiJ_G0026368) #18 Pex5l (MGP_PahariEiJ_G0026369) #19 MGP_PahariEiJ_G0026370 #20 Fxr1 (MGP_PahariEiJ_G0026371) #22 Dnajc19 (MGP_PahariEiJ_G0026372) #23 Sox2 (MGP_PahariEiJ_G0026373) #24 MGP_PahariEiJ_G0026374 #26 Zfp267 (MGP_PahariEiJ_G0026375) #30 Qrfpr (MGP_PahariEiJ_G0026376) #31 Anxa5 (MGP_PahariEiJ_G0026377) #32 MGP_PahariEiJ_G0026378 #33 Exosc9 (MGP_PahariEiJ_G0026379) #34 Ccna2 (MGP_PahariEiJ_G0026380) #35 Bbs7 (MGP_PahariEiJ_G0026381) #36 Trpc3 (MGP_PahariEiJ_G0026382) #37 Bltp1 (MGP_PahariEiJ_G0026383) Adad1 (MGP_PahariEiJ_G0026384) Il2 (MGP_PahariEiJ_G0026385) Il21 (MGP_PahariEiJ_G0026386) Rat MODERN SPECIES 11 Egfem1 (ENSRNOG00000023908) Kcnmb2 (ENSRNOG00000010094) #8 Zmat3 (ENSRNOG00000063864) #9 Pik3ca (ENSRNOG00000056371) #10 Kcnmb3 (ENSRNOG00000027836) #11 Zfp639 (ENSRNOG00000043053) #12 Mfn1 (ENSRNOG00000011057) #13 Gnb4 (ENSRNOG00000011070) #14 Actl6a (ENSRNOG00000011553) #15 Mrpl47 (ENSRNOG00000011639) #16 Ndufb5 (ENSRNOG00000011949) #17 Usp13 (ENSRNOG00000030639) #18 Pex5l (ENSRNOG00000011211) #19 Ttc14 (ENSRNOG00000011261) #20 Ccdc39 (ENSRNOG00000011440) #21 Fxr1 (ENSRNOG00000051480) #22 Dnajc19 (ENSRNOG00000049819) #23 Sox2 (ENSRNOG00000012199) #24 Atp11b (ENSRNOG00000052116) #25 Dcun1d1 (ENSRNOG00000012734) #26 Mccc1 (ENSRNOG00000013293) #27 Ccdc144b (ENSRNOG00000056177) #28 ENSRNOG00000065565 Acad9 (ENSRNOG00000014178) #29 Zfp267 (ENSRNOG00000042283) #30 ENSRNOG00000066024 Arsl (ENSRNOG00000028350) Qrfpr (ENSRNOG00000014414) #31 Anxa5 (ENSRNOG00000014453) #32 Smim43 (ENSRNOG00000070831) Exosc9 (ENSRNOG00000014674) #34 Cricetidae ANCESTRAL SPECIES 6 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701.g.a #20 ENSGT00390000013701.g.b #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.b.b ##28 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C.d #30 ENSGT00940000155988 #32 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 ENSGT00640000091487 Cricetidae_B ANCESTRAL SPECIES 55 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701.g.a #20 ENSGT00390000013701.g.b #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.b.b ##28 ENSGT00940000157312 #29 ENSGT00950000183169.C.d #30 Northern American deer mouse MODERN SPECIES 19 Kcnmb2 (ENSPEMG00000000476) #8 ENSPEMG00000026565 Zmat3 (ENSPEMG00000019154) #9 Pik3ca (ENSPEMG00000018399) #10 Kcnmb3 (ENSPEMG00000015081) #11 Zfp639 (ENSPEMG00000011611) #12 Mfn1 (ENSPEMG00000010348) #13 Gnb4 (ENSPEMG00000028778) #14 Actl6a (ENSPEMG00000015742) #15 Mrpl47 (ENSPEMG00000026294) #16 Ndufb5 (ENSPEMG00000018635) #17 Usp13 (ENSPEMG00000001021) #18 Pex5l (ENSPEMG00000006300) #19 Ttc14 (ENSPEMG00000013671) #20 Ccdc39 (ENSPEMG00000017829) #21 Fxr1 (ENSPEMG00000012962) #22 ENSPEMG00000006887 ##23 ENSPEMG00000026113 Sox2 (ENSPEMG00000013974) #24 ENSPEMG00000024881 Atp11b (ENSPEMG00000001656) #25 ENSPEMG00000018868 #26 Mccc1 (ENSPEMG00000014164) #27 ENSPEMG00000011597 ##28 Acad9 (ENSPEMG00000010549) #29 Zfp267 (ENSPEMG00000028230) #30 Qrfpr (ENSPEMG00000000133) #31 ENSPEMG00000001402 ENSPEMG00000026454 Anxa5 (ENSPEMG00000015439) #32 ENSPEMG00000025311 Prairie vole MODERN SPECIES Kcnmb2 (ENSMOCG00000017078) #8 Zmat3 (ENSMOCG00000018844) #9 Pik3ca (ENSMOCG00000013980) #10 Kcnmb3 (ENSMOCG00000016804) #11 Zfp639 (ENSMOCG00000020301) #12 Mfn1 (ENSMOCG00000019248) #13 Gnb4 (ENSMOCG00000015281) #14 Actl6a (ENSMOCG00000014148) #15 ENSMOCG00000007933 #16 ENSMOCG00000019293 #17 Usp13 (ENSMOCG00000015377) #18 Pex5l (ENSMOCG00000014372) #19 ENSMOCG00000020574 #20 ENSMOCG00000012924 #20 Ccdc39 (ENSMOCG00000018440) #21 Fxr1 (ENSMOCG00000017707) #22 Dnajc19 (ENSMOCG00000004841) ##23 Sox2 (ENSMOCG00000008169) #24 ENSMOCG00000011558 Atp11b (ENSMOCG00000013153) #25 ENSMOCG00000005771 #26 Mccc1 (ENSMOCG00000003671) #27 ENSMOCG00000009970 ##28 Acad9 (ENSMOCG00000013263) #29 Zfp267 (ENSMOCG00000020503) #30 Scfd1 (ENSMOCG00000017239) G2e3 (ENSMOCG00000012420) Prkd1 (ENSMOCG00000021339) Foxg1 (ENSMOCG00000008016) ENSMOCG00000007728 Nova1 (ENSMOCG00000006277) Cricetinae ANCESTRAL SPECIES 13 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701.g.a #20 ENSGT00390000013701.g.b #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00940000153661.a.a #28 ENSGT00940000157312 #29 ENSGT00950000183169.C.d #30 ENSGT01070000253744.a.b #31 ENSGT00940000155988 #32 ENSGT00950000183130.A #34 ENSGT00940000155372 #35 ENSGT00390000012346 #36 ENSGT01060000248588.a.c.b #37 ENSGT00640000091487 Golden Hamster MODERN SPECIES 636 Egfem1 (ENSMAUG00000012184) Kcnmb2 (ENSMAUG00000006173) #8 Zmat3 (ENSMAUG00000001986) #9 Pik3ca (ENSMAUG00000019874) #10 Kcnmb3 (ENSMAUG00000005213) #11 Mfn1 (ENSMAUG00000010778) #13 Gnb4 (ENSMAUG00000011589) #14 ENSMAUG00000018855 #15 Mrpl47 (ENSMAUG00000010772) #16 Ndufb5 (ENSMAUG00000017888) #17 Usp13 (ENSMAUG00000008996) #18 Pex5l (ENSMAUG00000011108) #19 ENSMAUG00000009258 #20 ENSMAUG00000000140 #20 Ccdc39 (ENSMAUG00000009369) #21 Fxr1 (ENSMAUG00000001188) #22 ENSMAUG00000011285 ##23 Sox2 (ENSMAUG00000017052) #24 Atp11b (ENSMAUG00000000325) #25 ENSMAUG00000018021 #26 ENSMAUG00000019275 Mccc1 (ENSMAUG00000018926) #27 ENSMAUG00000000987 ENSMAUG00000011985 #28 Acad9 (ENSMAUG00000013695) #29 Zfp267 (ENSMAUG00000000240) #30 Qrfpr (ENSMAUG00000016873) #31 Anxa5 (ENSMAUG00000014445) #32 Exosc9 (ENSMAUG00000008629) #34 Ccna2 (ENSMAUG00000018247) #35 Bbs7 (ENSMAUG00000001973) #36 Chinese hamster chok1gshd MODERN SPECIES 352 Egfem1 (ENSCGRG00001021334) Kcnmb2 (ENSCGRG00001009106) #8 Zmat3 (ENSCGRG00001012339) #9 Pik3ca (ENSCGRG00001019897) #10 Kcnmb3 (ENSCGRG00001008742) #11 ENSCGRG00001021748 #12 ENSCGRG00001022585 #13 Gnb4 (ENSCGRG00001021439) #14 Actl6a (ENSCGRG00001013395) #15 Mrpl47 (ENSCGRG00001015111) #16 Ndufb5 (ENSCGRG00001005505) #17 Usp13 (ENSCGRG00001017123) #18 Pex5l (ENSCGRG00001018482) #19 Ttc14 (ENSCGRG00001021605) #20 Ccdc39 (ENSCGRG00001018347) #21 Fxr1 (ENSCGRG00001024795) #22 ENSCGRG00001000090 ##23 Sox2 (ENSCGRG00001008732) #24 Atp11b (ENSCGRG00001021308) #25 ENSCGRG00001013592 ENSCGRG00001019778 #26 Mccc1 (ENSCGRG00001012469) #27 ENSCGRG00001017668 #28 Acad9 (ENSCGRG00001017444) #29 Zfp267 (ENSCGRG00001019794) #30 Qrfpr (ENSCGRG00001015065) #31 Anxa5 (ENSCGRG00001011395) #32 Exosc9 (ENSCGRG00001023030) #34 Ccna2 (ENSCGRG00001021415) #35 Bbs7 (ENSCGRG00001022476) #36 Trpc3 (ENSCGRG00001021196) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1036 Kcnmb2 (ENSNGAG00000023449) #8 Zmat3 (ENSNGAG00000023602) #9 Pik3ca (ENSNGAG00000011770) #10 Kcnmb3 (ENSNGAG00000023104) #11 Zfp639 (ENSNGAG00000017433) #12 Mfn1 (ENSNGAG00000022452) #13 Gnb4 (ENSNGAG00000023855) #14 Actl6a (ENSNGAG00000023000) #15 Mrpl47 (ENSNGAG00000022354) #16 Ndufb5 (ENSNGAG00000019121) #17 Usp13 (ENSNGAG00000008457) #18 Pex5l (ENSNGAG00000021052) #19 Ttc14 (ENSNGAG00000019537) #20 Ccdc39 (ENSNGAG00000023870) #21 Fxr1 (ENSNGAG00000021726) #22 ENSNGAG00000012574 ##23 Lesser Egyptian jerboa MODERN SPECIES 47 ENSJJAG00000012112 Kcnmb2 (ENSJJAG00000021914) #8 Zmat3 (ENSJJAG00000004288) #9 Pik3ca (ENSJJAG00000021453) #10 Kcnmb3 (ENSJJAG00000023050) #11 ENSJJAG00000024013 #12 Mfn1 (ENSJJAG00000019731) #13 ENSJJAG00000023681 #14 Actl6a (ENSJJAG00000017810) #15 Mrpl47 (ENSJJAG00000020002) #16 Ndufb5 (ENSJJAG00000012502) #17 Usp13 (ENSJJAG00000018696) #18 Pex5l (ENSJJAG00000000620) #19 ENSJJAG00000023040 #20 Ccdc39 (ENSJJAG00000016989) #21 Fxr1 (ENSJJAG00000019175) #22 ENSJJAG00000015744 ##23 Sox2 (ENSJJAG00000002483) #24 Atp11b (ENSJJAG00000018460) #25 ENSJJAG00000019826 #26 Mccc1 (ENSJJAG00000003543) #27 ENSJJAG00000016856 ##28 Ptpdc1 (ENSJJAG00000015386) Barx1 (ENSJJAG00000012954) ENSJJAG00000016156 Phf2 (ENSJJAG00000019075) Fam120a (ENSJJAG00000010692) Wnk2 (ENSJJAG00000019510) ENSJJAG00000015723 Card19 (ENSJJAG00000018218) Susd3 (ENSJJAG00000023422) Kangaroo rat MODERN SPECIES 493 Zfp639 (ENSDORG00000004733) #12 Mfn1 (ENSDORG00000016388) #13 Gnb4 (ENSDORG00000015363) #14 Actl6a (ENSDORG00000007648) #15 Mrpl47 (ENSDORG00000007650) #16 Ndufb5 (ENSDORG00000007651) #17 ENSDORG00000001060 Usp13 (ENSDORG00000013004) #18 Pex5l (ENSDORG00000013007) #19 Ttc14 (ENSDORG00000002727) #20 Ccdc39 (ENSDORG00000002728) #21 Fxr1 (ENSDORG00000005853) #22 ENSDORG00000005862 ##23 Rodentia_A ANCESTRAL SPECIES 5 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Hystricomorpha ANCESTRAL SPECIES 6 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.a.a.a ##26 ENSGT00940000156941 #27 ENSGT00390000008796 ENSGT00390000016972.b.j.a.a ENSGT00730000111263 ENSGT00940000158330 ENSGT00390000012807 ENSGT00940000160658 ENSGT00730000111453 ENSGT00730000110943.C ENSGT00940000160853 ENSGT01030000234598.a.a.a Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000011894 #10 KCNMB3 (ENSHGLG00000012132) #11 ZNF639 (ENSHGLG00000050776) #12 MFN1 (ENSHGLG00000012515) #13 ENSHGLG00000044219 GNB4 (ENSHGLG00000012880) #14 ACTL6A (ENSHGLG00000013350) #15 MRPL47 (ENSHGLG00000033799) #16 NDUFB5 (ENSHGLG00000014377) #17 USP13 (ENSHGLG00000014472) #18 PEX5L (ENSHGLG00000016946) #19 ENSHGLG00000016952 TTC14 (ENSHGLG00000016959) #20 CCDC39 (ENSHGLG00000016969) #21 ENSHGLG00000039606 FXR1 (ENSHGLG00000018814) #22 ENSHGLG00000014387 ##23 ENSHGLG00000050891 ENSHGLG00000032116 SOX2 (ENSHGLG00000046210) #24 ATP11B (ENSHGLG00000014553) #25 ENSHGLG00000014589 ##26 ENSHGLG00000041896 ENSHGLG00000014650 #27 ENSHGLG00000014676 RPL35A (ENSHGLG00000046416) IQCG (ENSHGLG00000018834) LRCH3 (ENSHGLG00000019171) ENSHGLG00000035747 ENSHGLG00000019355 ENSHGLG00000017149 Hystricomorpha_a ANCESTRAL SPECIES 4 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b.f #23 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.a.a.a ##26 ENSGT00940000156941 #27 ENSGT00390000008796 ENSGT00390000016972.b.j.a.a ENSGT00730000111263 ENSGT00940000158330 ENSGT00390000012807 ENSGT00940000160658 ENSGT00940000160853 ENSGT01030000234598.a.a.a ENSGT00940000161784 Guinea pig MODERN SPECIES 47 TBL1XR1 (ENSCPOG00000005472) KCNMB2 (ENSCPOG00000013955) #8 ZMAT3 (ENSCPOG00000003865) #9 PIK3CA (ENSCPOG00000006574) #10 KCNMB3 (ENSCPOG00000025991) #11 ZNF639 (ENSCPOG00000039664) #12 MFN1 (ENSCPOG00000033188) #13 GNB4 (ENSCPOG00000034790) #14 ACTL6A (ENSCPOG00000025370) #15 ENSCPOG00000002312 #16 NDUFB5 (ENSCPOG00000036110) #17 USP13 (ENSCPOG00000002315) #18 PEX5L (ENSCPOG00000002319) #19 TTC14 (ENSCPOG00000015311) #20 CCDC39 (ENSCPOG00000015314) #21 FXR1 (ENSCPOG00000010418) #22 ENSCPOG00000021198 #23 SPTLC1 (ENSCPOG00000015106) ROR2 (ENSCPOG00000021707) AUH (ENSCPOG00000001066) SYK (ENSCPOG00000010410) Hystricomorpha_b ANCESTRAL SPECIES 9 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000170892 ENSGT00940000156941 #27 ENSGT00390000008796 ENSGT00390000016972.b.j.a.a ENSGT00730000111263 ENSGT00940000158330 ENSGT00390000012807 ENSGT00940000160658 ENSGT00940000160853 ENSGT01030000234598.a.a.a ENSGT00940000161784 ENSGT00940000160780 Long-tailed chinchilla MODERN SPECIES 127 TBL1XR1 (ENSCLAG00000013893) KCNMB2 (ENSCLAG00000014319) #8 ZMAT3 (ENSCLAG00000013464) #9 PIK3CA (ENSCLAG00000015135) #10 KCNMB3 (ENSCLAG00000014741) #11 ZNF639 (ENSCLAG00000011168) #12 MFN1 (ENSCLAG00000015912) #13 GNB4 (ENSCLAG00000015522) #14 ACTL6A (ENSCLAG00000012251) #15 ENSCLAG00000015039 #16 ENSCLAG00000014903 #17 USP13 (ENSCLAG00000015308) #18 PEX5L (ENSCLAG00000014042) #19 TTC14 (ENSCLAG00000013302) #20 CCDC39 (ENSCLAG00000012683) #21 FXR1 (ENSCLAG00000014182) #22 DNAJC19 (ENSCLAG00000011246) ##23 SOX2 (ENSCLAG00000017978) #24 ATP11B (ENSCLAG00000012551) #25 ENSCLAG00000014207 MCCC1 (ENSCLAG00000014174) #27 LMLN (ENSCLAG00000011520) ENSCLAG00000012348 IQCG (ENSCLAG00000013851) LRCH3 (ENSCLAG00000015543) ENSCLAG00000012210 RUBCN (ENSCLAG00000013495) TNK2 (ENSCLAG00000012555) TFRC (ENSCLAG00000014371) ZDHHC19 (ENSCLAG00000010728) SLC51A (ENSCLAG00000011171) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 339 MFN1 (ENSODEG00000002887) #13 GNB4 (ENSODEG00000002845) #14 ENSODEG00000002804 #15 ENSODEG00000002762 #16 NDUFB5 (ENSODEG00000002740) #17 ENSODEG00000002050 ENSODEG00000018753 USP13 (ENSODEG00000001943) #18 PEX5L (ENSODEG00000001608) #19 ENSODEG00000001450 #20 CCDC39 (ENSODEG00000001427) #21 ENSODEG00000001368 ENSODEG00000001069 #22 ENSODEG00000000914 #23 Degu MODERN SPECIES 235 PCMTD2 (ENSODEG00000004359) ENSODEG00000004395 MYT1 (ENSODEG00000004469) OPRL1 (ENSODEG00000004636) LKAAEAR1 (ENSODEG00000004644) RGS19 (ENSODEG00000004661) TCEA2 (ENSODEG00000004734) SOX18 (ENSODEG00000004785) C20orf204 (ENSODEG00000004800) PRPF6 (ENSODEG00000004841) ENSODEG00000006177 #22 SAMD10 (ENSODEG00000006200) ZNF512B (ENSODEG00000006241) UCKL1 (ENSODEG00000006332) DNAJC5 (ENSODEG00000006383) ENSODEG00000006430 ABHD16B (ENSODEG00000019323) ZBTB46 (ENSODEG00000006493) SLC2A4RG (ENSODEG00000006508) LIME1 (ENSODEG00000006535) ZGPAT (ENSODEG00000006562) ENSODEG00000006608 ARFRP1 (ENSODEG00000006629) RTEL1 (ENSODEG00000006769) STMN3 (ENSODEG00000007140) ENSODEG00000007154 Degu MODERN SPECIES 200 ENSODEG00000001487 ENSODEG00000001474 ZDHHC13 (ENSODEG00000001434) CSRP3 (ENSODEG00000001395) E2F8 (ENSODEG00000001309) ENSODEG00000001265 NAV2 (ENSODEG00000001086) DBX1 (ENSODEG00000000930) HTATIP2 (ENSODEG00000000910) ENSODEG00000000894 PRMT3 (ENSODEG00000000824) SLC6A5 (ENSODEG00000000719) ENSODEG00000018648 NELL1 (ENSODEG00000000600) ENSODEG00000000998 #22 ANO5 (ENSODEG00000000906) SLC17A6 (ENSODEG00000000829) FANCF (ENSODEG00000000786) ENSODEG00000000779 ENSODEG00000000771 SVIP (ENSODEG00000000706) CCDC179 (ENSODEG00000000686) ENSODEG00000000674 Sciuridae ANCESTRAL SPECIES 12 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980.k #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Marmotini ANCESTRAL SPECIES 59 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980.k #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 Alpin marmot MODERN SPECIES 37 KCNMB3 (ENSMMMG00000004362) #11 ENSMMMG00000004333 #12 MFN1 (ENSMMMG00000004267) #13 GNB4 (ENSMMMG00000004203) #14 ACTL6A (ENSMMMG00000004175) #15 MRPL47 (ENSMMMG00000004133) #16 ENSMMMG00000004120 NDUFB5 (ENSMMMG00000004098) #17 USP13 (ENSMMMG00000004025) #18 PEX5L (ENSMMMG00000003637) #19 ENSMMMG00000003599 ENSMMMG00000003524 #20 ENSMMMG00000003512 #20 CCDC39 (ENSMMMG00000003487) #21 ENSMMMG00000003471 FXR1 (ENSMMMG00000003158) #22 ENSMMMG00000003137 ##23 ENSMMMG00000003124 SOX2 (ENSMMMG00000003111) #24 ENSMMMG00000003075 ATP11B (ENSMMMG00000003020) #25 DCUN1D1 (ENSMMMG00000003003) #26 MCCC1 (ENSMMMG00000002969) #27 ENSMMMG00000002953 B3GNT5 (ENSMMMG00000002941) MCF2L2 (ENSMMMG00000002829) ENSMMMG00000002795 ENSMMMG00000002779 Marmotini_b ANCESTRAL SPECIES 149 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000015224.c.b.b.a.a ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.k #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000154384.h.b.f #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 Arctic ground squirrel MODERN SPECIES 22 ENSUPAG00010022722 KCNMB3 (ENSUPAG00010022719) #11 ENSUPAG00010022718 ZNF639 (ENSUPAG00010022715) #12 MFN1 (ENSUPAG00010022711) #13 GNB4 (ENSUPAG00010022702) #14 ENSUPAG00010022699 ACTL6A (ENSUPAG00010022696) #15 MRPL47 (ENSUPAG00010022693) #16 NDUFB5 (ENSUPAG00010022690) #17 USP13 (ENSUPAG00010022684) #18 PEX5L (ENSUPAG00010022611) #19 TTC14 (ENSUPAG00010022594) #20 CCDC39 (ENSUPAG00010022590) #21 ENSUPAG00010022589 FXR1 (ENSUPAG00010022534) #22 ENSUPAG00010022530 ##23 ATP11B (ENSUPAG00010022507) #25 DCUN1D1 (ENSUPAG00010022504) #26 MCCC1 (ENSUPAG00010022499) #27 ENSUPAG00010022496 ENSUPAG00010022491 ENSUPAG00010022487 MCF2L2 (ENSUPAG00010022478) ENSUPAG00010022475 Squirrel MODERN SPECIES 166 ZMAT3 (ENSSTOG00000028436) #9 PIK3CA (ENSSTOG00000012906) #10 KCNMB3 (ENSSTOG00000013715) #11 ZNF639 (ENSSTOG00000001442) #12 MFN1 (ENSSTOG00000005167) #13 GNB4 (ENSSTOG00000005210) #14 ENSSTOG00000033903 ACTL6A (ENSSTOG00000010540) #15 MRPL47 (ENSSTOG00000032487) #16 NDUFB5 (ENSSTOG00000010557) #17 USP13 (ENSSTOG00000002367) #18 PEX5L (ENSSTOG00000002383) #19 TTC14 (ENSSTOG00000003827) #20 ENSSTOG00000003847 #21 ENSSTOG00000011392 FXR1 (ENSSTOG00000010612) #22 ENSSTOG00000011508 #23 SOX2 (ENSSTOG00000011011) #24 ATP11B (ENSSTOG00000016462) #25 DCUN1D1 (ENSSTOG00000016465) #26 MCCC1 (ENSSTOG00000010361) #27 ENSSTOG00000010372 B3GNT5 (ENSSTOG00000010399) ENSSTOG00000029916 MCF2L2 (ENSSTOG00000010382) Eurasian red squirrel MODERN SPECIES 1 KCNMB3 (ENSSVLG00005007870) #11 ENSSVLG00005007822 ENSSVLG00005007788 #12 MFN1 (ENSSVLG00005007726) #13 GNB4 (ENSSVLG00005007689) #14 ENSSVLG00005007595 #15 MRPL47 (ENSSVLG00005007505) #16 ENSSVLG00005007458 #17 USP13 (ENSSVLG00005007303) #18 ENSSVLG00005007236 PEX5L (ENSSVLG00005006552) #19 ENSSVLG00005006293 TTC14 (ENSSVLG00005006262) #20 CCDC39 (ENSSVLG00005006018) #21 ENSSVLG00005005952 FXR1 (ENSSVLG00005005627) #22 ENSSVLG00005005504 ##23 SOX2 (ENSSVLG00005005486) #24 ENSSVLG00005005467 ATP11B (ENSSVLG00005005419) #25 DCUN1D1 (ENSSVLG00005005371) #26 MCCC1 (ENSSVLG00005005194) #27 ENSSVLG00005005088 ENSSVLG00005005061 B3GNT5 (ENSSVLG00005005047) MCF2L2 (ENSSVLG00005005015) KLHL6 (ENSSVLG00005004948) KLHL24 (ENSSVLG00005004913) YEATS2 (ENSSVLG00005004883) MAP6D1 (ENSSVLG00005004847) PARL (ENSSVLG00005004781) Lagomorpha ANCESTRAL SPECIES 6 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.b ENSGT00860000135739 ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000155792 ENSGT00470000042284 ENSGT00940000160342 Rabbit MODERN SPECIES 5 TBL1XR1 (ENSOCUG00000017078) KCNMB2 (ENSOCUG00000005494) #8 ZMAT3 (ENSOCUG00000004658) #9 PIK3CA (ENSOCUG00000010631) #10 KCNMB3 (ENSOCUG00000010643) #11 MFN1 (ENSOCUG00000000928) #13 GNB4 (ENSOCUG00000000931) #14 ACTL6A (ENSOCUG00000017883) #15 MRPL47 (ENSOCUG00000017886) #16 NDUFB5 (ENSOCUG00000017887) #17 USP13 (ENSOCUG00000006043) #18 ENSOCUG00000039309 PEX5L (ENSOCUG00000006053) #19 TTC14 (ENSOCUG00000000806) #20 CCDC39 (ENSOCUG00000000812) #21 FXR1 (ENSOCUG00000023518) #22 DNAJC19 (ENSOCUG00000014043) ##23 ENSOCUG00000035765 ENSOCUG00000031658 ENSOCUG00000028029 ATP11B (ENSOCUG00000012358) #25 DCUN1D1 (ENSOCUG00000012386) #26 MCCC1 (ENSOCUG00000012393) #27 ENSOCUG00000005563 RFC4 (ENSOCUG00000005014) ENSOCUG00000005011 ENSOCUG00000031344 KNG1 (ENSOCUG00000005003) HRG (ENSOCUG00000011687) FETUB (ENSOCUG00000001032) AHSG (ENSOCUG00000002057) Pika MODERN SPECIES 365 FXR1 (ENSOPRG00000009223) #22 DNAJC19 (ENSOPRG00000009256) ##23 Tree shrew MODERN SPECIES 553 ENSTBEG00000007370 #22 Primates ANCESTRAL SPECIES 1 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980.p #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Lemuriformes ANCESTRAL SPECIES 9 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980.p #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a.g.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000164826 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Lemuriformes_a ANCESTRAL SPECIES 9 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00960000190585 ENSGT00390000009980.p #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a.g.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000164826 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 ENSGT00940000155470.b Greater bamboo lemur MODERN SPECIES 177 ENSPSMG00000011929 #21 ENSPSMG00000011919 ENSPSMG00000011908 ENSPSMG00000011886 FXR1 (ENSPSMG00000011829) #22 ENSPSMG00000011691 ##23 ENSPSMG00000011678 SOX2 (ENSPSMG00000011661) #24 ENSPSMG00000011653 Coquerels sifaka MODERN SPECIES 162 ZNF639 (ENSPCOG00000025183) #12 MFN1 (ENSPCOG00000018204) #13 GNB4 (ENSPCOG00000023050) #14 ENSPCOG00000023805 ACTL6A (ENSPCOG00000027739) #15 MRPL47 (ENSPCOG00000019367) #16 ENSPCOG00000025389 #17 ENSPCOG00000023588 #17 USP13 (ENSPCOG00000000179) #18 ENSPCOG00000028880 PEX5L (ENSPCOG00000002922) #19 TTC14 (ENSPCOG00000027629) #20 CCDC39 (ENSPCOG00000018971) #21 ENSPCOG00000026996 ENSPCOG00000025037 FXR1 (ENSPCOG00000020057) #22 DNAJC19 (ENSPCOG00000022644) ##23 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES ZMAT3 (ENSMICG00000049501) #9 PIK3CA (ENSMICG00000049155) #10 KCNMB3 (ENSMICG00000048999) #11 ENSMICG00000048810 #12 MFN1 (ENSMICG00000049257) #13 GNB4 (ENSMICG00000049251) #14 ACTL6A (ENSMICG00000049032) #15 MRPL47 (ENSMICG00000049377) #16 ENSMICG00000049551 #17 USP13 (ENSMICG00000049124) #18 ENSMICG00000049219 PEX5L (ENSMICG00000048938) #19 TTC14 (ENSMICG00000049351) #20 CCDC39 (ENSMICG00000048849) #21 ENSMICG00000049410 ENSMICG00000048978 #22 ENSMICG00000049008 ##23 ENSMICG00000049314 ENSMICG00000049506 SOX2 (ENSMICG00000049239) #24 ENSMICG00000048904 ATP11B (ENSMICG00000049475) #25 ENSMICG00000049045 #26 MCCC1 (ENSMICG00000048884) #27 ENSMICG00000049005 MCF2L2 (ENSMICG00000049191) B3GNT5 (ENSMICG00000049049) ENSMICG00000049437 ENSMICG00000049467 KLHL24 (ENSMICG00000049481) YEATS2 (ENSMICG00000049411) Mouse lemur MODERN SPECIES 28 ENSMICG00000003714 ENSMICG00000044751 ENSMICG00000031829 HLA-DOB (ENSMICG00000034483) TAP2 (ENSMICG00000015245) PSMB8 (ENSMICG00000015254) TAP1 (ENSMICG00000015264) PSMB9 (ENSMICG00000015307) ENSMICG00000031166 ENSMICG00000035395 SFTA2 (ENSMICG00000030909) SYNGAP1 (ENSMICG00000005678) CUTA (ENSMICG00000005673) PHF1 (ENSMICG00000005660) KIFC1 (ENSMICG00000005648) ENSMICG00000033163 #22 DAXX (ENSMICG00000000933) TAPBP (ENSMICG00000042293) RGL2 (ENSMICG00000000926) PFDN6 (ENSMICG00000000922) WDR46 (ENSMICG00000000916) ENSMICG00000035485 VPS52 (ENSMICG00000027900) RING1 (ENSMICG00000030050) HSD17B8 (ENSMICG00000000908) SLC39A7 (ENSMICG00000000905) RXRB (ENSMICG00000000899) COL11A2 (ENSMICG00000000879) ENSMICG00000001373 HLA-DPB1 (ENSMICG00000030867) HLA-DPA1 (ENSMICG00000003711) Bushbaby MODERN SPECIES 281 FXR1 (ENSOGAG00000008751) #22 ENSOGAG00000008754 ##23 SOX2 (ENSOGAG00000029165) #24 ATP11B (ENSOGAG00000005672) #25 DCUN1D1 (ENSOGAG00000000658) #26 MCCC1 (ENSOGAG00000000659) #27 ENSOGAG00000000661 MCF2L2 (ENSOGAG00000000662) B3GNT5 (ENSOGAG00000027145) KLHL6 (ENSOGAG00000000666) KLHL24 (ENSOGAG00000033529) YEATS2 (ENSOGAG00000013954) MAP6D1 (ENSOGAG00000030318) PARL (ENSOGAG00000006126) VPS53 (ENSOGAG00000001350) TLCD3A (ENSOGAG00000001351) Haplorrhini ANCESTRAL SPECIES 5 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Tarsier MODERN SPECIES 6410 FXR1 (ENSTSYG00000001610) #22 DNAJC19 (ENSTSYG00000001611) ##23 MAF (ENSTSYG00000027792) Simiiformes ANCESTRAL SPECIES 1 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Platyrrhini ANCESTRAL SPECIES 43 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837.r #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a.c.b ##23 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.f #26 ENSGT00940000156941.j #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063.p ENSGT00940000155470.b ENSGT00940000156739.b.b.a ENSGT00940000156739.b.a Mas night monkey MODERN SPECIES 793 FXR1 (ENSANAG00000026001) #22 DNAJC19 (ENSANAG00000023901) ##23 SOX2 (ENSANAG00000000047) #24 ENSANAG00000023464 ENSANAG00000018148 ATP11B (ENSANAG00000033054) #25 ENSANAG00000020880 #26 MCCC1 (ENSANAG00000028235) #27 LAMP3 (ENSANAG00000021411) MCF2L2 (ENSANAG00000030096) KLHL6 (ENSANAG00000034934) KLHL24 (ENSANAG00000030957) ENSANAG00000032967 YEATS2 (ENSANAG00000034729) MAP6D1 (ENSANAG00000031904) ENSANAG00000028369 Cebidae ANCESTRAL SPECIES 14 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837.r #16 ENSGT00390000002837.q #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a.c.b.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.f #26 ENSGT00940000156941.j #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063.p ENSGT00940000155470.b ENSGT00940000156739.b.b.a Marmoset MODERN SPECIES 6 PIK3CA (ENSCJAG00000013294) #10 GNB4 (ENSCJAG00000064977) #14 ENSCJAG00000069983 #11 ZNF639 (ENSCJAG00000013246) #12 MFN1 (ENSCJAG00000013155) #13 ACTL6A (ENSCJAG00000013036) #15 ENSCJAG00000013028 #16 NDUFB5 (ENSCJAG00000013015) #17 ENSCJAG00000039957 USP13 (ENSCJAG00000012999) #18 ENSCJAG00000077201 PEX5L (ENSCJAG00000012957) #19 ENSCJAG00000081830 TTC14 (ENSCJAG00000012923) #20 CCDC39 (ENSCJAG00000012901) #21 FXR1 (ENSCJAG00000012802) #22 ENSCJAG00000012795 ##23 ENSCJAG00000069793 ENSCJAG00000080211 SOX2 (ENSCJAG00000008401) #24 ENSCJAG00000070332 ENSCJAG00000076627 ENSCJAG00000072440 ENSCJAG00000076242 ATP11B (ENSCJAG00000005176) #25 DCUN1D1 (ENSCJAG00000005148) #26 MCCC1 (ENSCJAG00000005103) #27 ENSCJAG00000081113 MCF2L2 (ENSCJAG00000021205) B3GNT5 (ENSCJAG00000059459) KLHL6 (ENSCJAG00000021212) Cebidae_a ANCESTRAL SPECIES 14 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837.r #16 ENSGT00390000014814.a.b.a.a.b ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a.c.b.a.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.f #26 ENSGT00940000156941.j #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063.p ENSGT00940000155470.b ENSGT00940000156739.b.b.a ENSGT00940000156739.b.a Bolivian squirrel monkey MODERN SPECIES 62 KCNMB2 (ENSSBOG00000024312) #8 ZMAT3 (ENSSBOG00000033332) #9 PIK3CA (ENSSBOG00000020045) #10 KCNMB3 (ENSSBOG00000022343) #11 ZNF639 (ENSSBOG00000025502) #12 MFN1 (ENSSBOG00000034184) #13 GNB4 (ENSSBOG00000029068) #14 ACTL6A (ENSSBOG00000027162) #15 MRPL47 (ENSSBOG00000018241) #16 ENSSBOG00000016971 ENSSBOG00000029840 #17 USP13 (ENSSBOG00000026837) #18 PEX5L (ENSSBOG00000027789) #19 TTC14 (ENSSBOG00000024686) #20 CCDC39 (ENSSBOG00000027250) #21 FXR1 (ENSSBOG00000033567) #22 ENSSBOG00000026921 ##23 ATP11B (ENSSBOG00000025969) #25 DCUN1D1 (ENSSBOG00000028062) #26 MCCC1 (ENSSBOG00000026219) #27 ENSSBOG00000021035 MCF2L2 (ENSSBOG00000029425) KLHL6 (ENSSBOG00000020503) KLHL24 (ENSSBOG00000034313) YEATS2 (ENSSBOG00000024142) ENSSBOG00000029528 ENSSBOG00000026916 PARL (ENSSBOG00000023148) ABCC5 (ENSSBOG00000021176) ENSSBOG00000013776 HTR3C (ENSSBOG00000029560) Capuchin MODERN SPECIES 111 ENSCCAG00000033379 ETV5 (ENSCCAG00000020480) DGKG (ENSCCAG00000029064) CRYGS (ENSCCAG00000024626) TBCCD1 (ENSCCAG00000034607) DNAJB11 (ENSCCAG00000036818) AHSG (ENSCCAG00000035436) FETUB (ENSCCAG00000023367) HRG (ENSCCAG00000018171) KNG1 (ENSCCAG00000031351) ENSCCAG00000026259 ENSCCAG00000021313 EIF4A2 (ENSCCAG00000036268) RFC4 (ENSCCAG00000029943) ADIPOQ (ENSCCAG00000031131) FXR1 (ENSCCAG00000025006) #22 ENSCCAG00000031123 ##23 SOX2 (ENSCCAG00000020109) #24 TCF7L2 (ENSCCAG00000031432) HABP2 (ENSCCAG00000031203) NRAP (ENSCCAG00000022013) Catarrhini ANCESTRAL SPECIES 2 ENSGT00530000063564.b.e.b ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ENSGT00390000013063 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000156335.o #12 ENSGT00390000013727.d #13 ENSGT00910000147799 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ENSGT00390000013063 Rhinopithecus ANCESTRAL SPECIES 202 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335.o #12 ENSGT00390000013727.d #13 ENSGT00910000147799 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.s #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000154194 ENSGT00940000158205 ENSGT00940000155196.q.a ENSGT00940000162645 ENSGT00910000146913 ENSGT00940000163645 Golden snub-nosed monkey MODERN SPECIES 2754 TTC14 (ENSRROG00000045769) #20 CCDC39 (ENSRROG00000039226) #21 FXR1 (ENSRROG00000034524) #22 DNAJC19 (ENSRROG00000033780) ##23 Black snub-nosed monkey MODERN SPECIES 74 PIK3CA (ENSRBIG00000032867) #10 KCNMB3 (ENSRBIG00000028540) #11 ENSRBIG00000041214 #12 MFN1 (ENSRBIG00000035520) #13 ENSRBIG00000029392 GNB4 (ENSRBIG00000026920) #14 ENSRBIG00000032218 ACTL6A (ENSRBIG00000036584) #15 MRPL47 (ENSRBIG00000030725) #16 ENSRBIG00000005151 #17 USP13 (ENSRBIG00000035081) #18 PEX5L (ENSRBIG00000020184) #19 ENSRBIG00000033160 TTC14 (ENSRBIG00000039635) #20 CCDC39 (ENSRBIG00000038461) #21 FXR1 (ENSRBIG00000036968) #22 DNAJC19 (ENSRBIG00000041203) ##23 ENSRBIG00000031071 ENSRBIG00000029493 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00530000063564.b.e.b ENSGT00940000156335.o #12 ENSGT00390000013727.d #13 ENSGT00910000147799 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ENSGT00390000013063 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000156335.o #12 ENSGT00390000013727.d #13 ENSGT00910000147799 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837.m #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000147968 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147139 ENSGT00910000147149 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00530000063564.b.e.b ENSGT00940000156335.o #12 ENSGT00390000013727.d #13 ENSGT00910000147799 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837.m #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000147968 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147139 ENSGT00910000147149 Cercopithecinae_d ANCESTRAL SPECIES 52 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000147968 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147139 ENSGT00910000147149 Sooty mangabey MODERN SPECIES 292 TTC14 (ENSCATG00000031048) #20 CCDC39 (ENSCATG00000039842) #21 ENSCATG00000032808 FXR1 (ENSCATG00000040925) #22 DNAJC19 (ENSCATG00000035477) ##23 SOX2 (ENSCATG00000016562) #24 ENSCATG00000016756 ENSCATG00000035017 ATP11B (ENSCATG00000038132) #25 DCUN1D1 (ENSCATG00000036712) #26 MCCC1 (ENSCATG00000037699) #27 LAMP3 (ENSCATG00000044257) MCF2L2 (ENSCATG00000012769) B3GNT5 (ENSCATG00000023620) Drill MODERN SPECIES 1598 TTC14 (ENSMLEG00000000458) #20 CCDC39 (ENSMLEG00000033624) #21 ENSMLEG00000040737 FXR1 (ENSMLEG00000041270) #22 DNAJC19 (ENSMLEG00000040727) ##23 Olive baboon MODERN SPECIES 11 MFN1 (ENSPANG00000018156) #13 GNB4 (ENSPANG00000018882) #14 ENSPANG00000010712 ENSPANG00000048993 ACTL6A (ENSPANG00000024431) #15 ENSPANG00000008191 #16 NDUFB5 (ENSPANG00000008899) #17 USP13 (ENSPANG00000008384) #18 PEX5L (ENSPANG00000011898) #19 ENSPANG00000037628 TTC14 (ENSPANG00000011012) #20 CCDC39 (ENSPANG00000018158) #21 ENSPANG00000031815 ENSPANG00000042364 ENSPANG00000042486 FXR1 (ENSPANG00000011899) #22 DNAJC19 (ENSPANG00000034438) ##23 ENSPANG00000040162 ENSPANG00000044238 ENSPANG00000047546 ENSPANG00000051099 ENSPANG00000034153 ATP11B (ENSPANG00000015886) #25 DCUN1D1 (ENSPANG00000008386) #26 MCCC1 (ENSPANG00000006870) #27 LAMP3 (ENSPANG00000008975) B3GNT5 (ENSPANG00000005729) MCF2L2 (ENSPANG00000017801) KLHL6 (ENSPANG00000010027) KLHL24 (ENSPANG00000031538) YEATS2 (ENSPANG00000025622) Macaca ANCESTRAL SPECIES 5 ENSGT00390000013727.d #13 ENSGT00910000147799 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156000.o.b ENSGT00940000156305 #15 ENSGT00390000002837.m #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000147968 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147139 ENSGT00910000147149 Pig-tailed macaque MODERN SPECIES 563 TTC14 (ENSMNEG00000044800) #20 CCDC39 (ENSMNEG00000033311) #21 ENSMNEG00000041132 FXR1 (ENSMNEG00000031733) #22 DNAJC19 (ENSMNEG00000037111) ##23 SOX2 (ENSMNEG00000026232) #24 ENSMNEG00000023089 ENSMNEG00000031959 ENSMNEG00000041253 ATP11B (ENSMNEG00000044870) #25 DCUN1D1 (ENSMNEG00000034646) #26 MCCC1 (ENSMNEG00000017163) #27 LAMP3 (ENSMNEG00000039831) ENSMNEG00000023945 MCF2L2 (ENSMNEG00000028315) B3GNT5 (ENSMNEG00000027097) KLHL6 (ENSMNEG00000022023) KLHL24 (ENSMNEG00000039455) YEATS2 (ENSMNEG00000042931) Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335.o #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156000.o.b ENSGT00940000156305 #15 ENSGT00390000002837.m #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT01100000263509.a.a.b.b.a.b.a.a.a.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b ENSGT00940000156739.b.b.a Crab-eating macaque MODERN SPECIES 11 ZNF639 (ENSMFAG00000002403) #12 MFN1 (ENSMFAG00000003857) #13 GNB4 (ENSMFAG00000041470) #14 ENSMFAG00000030517 ENSMFAG00000065242 ENSMFAG00000054257 ACTL6A (ENSMFAG00000030153) #15 ENSMFAG00000053669 #16 NDUFB5 (ENSMFAG00000042220) #17 USP13 (ENSMFAG00000042834) #18 ENSMFAG00000061892 PEX5L (ENSMFAG00000036976) #19 ENSMFAG00000053927 TTC14 (ENSMFAG00000046249) #20 CCDC39 (ENSMFAG00000002267) #21 FXR1 (ENSMFAG00000040264) #22 DNAJC19 (ENSMFAG00000034041) ##23 ENSMFAG00000058781 SOX2 (ENSMFAG00000027781) #24 ENSMFAG00000003633 ATP11B (ENSMFAG00000035388) #25 MCCC1 (ENSMFAG00000000043) #27 LAMP3 (ENSMFAG00000042658) ENSMFAG00000050998 MCF2L2 (ENSMFAG00000036484) B3GNT5 (ENSMFAG00000011168) ENSMFAG00000035316 YEATS2 (ENSMFAG00000045323) MAP6D1 (ENSMFAG00000064027) PARL (ENSMFAG00000036652) ABCC5 (ENSMFAG00000038091) Rhesus MODERN SPECIES 11 KCNMB3 (ENSMMUG00000005187) #11 ZNF639 (ENSMMUG00000023078) #12 MFN1 (ENSMMUG00000004079) #13 GNB4 (ENSMMUG00000004083) #14 ENSMMUG00000054028 ACTL6A (ENSMMUG00000009742) #15 MRPL47 (ENSMMUG00000009744) #16 NDUFB5 (ENSMMUG00000009746) #17 USP13 (ENSMMUG00000003594) #18 PEX5L (ENSMMUG00000003595) #19 ENSMMUG00000050512 ENSMMUG00000049713 TTC14 (ENSMMUG00000019656) #20 CCDC39 (ENSMMUG00000045200) #21 ENSMMUG00000013353 FXR1 (ENSMMUG00000012105) #22 DNAJC19 (ENSMMUG00000012104) ##23 ENSMMUG00000063235 ENSMMUG00000057005 ENSMMUG00000047232 ENSMMUG00000018530 ATP11B (ENSMMUG00000019323) #25 DCUN1D1 (ENSMMUG00000010552) #26 MCCC1 (ENSMMUG00000010553) #27 LAMP3 (ENSMMUG00000010555) ENSMMUG00000053420 MCF2L2 (ENSMMUG00000001456) B3GNT5 (ENSMMUG00000031605) KLHL6 (ENSMMUG00000022115) YEATS2 (ENSMMUG00000008070) ENSMMUG00000064298 Vervet Monkey MODERN SPECIES 6 KCNMB2 (ENSCSAG00000012931) #8 ZMAT3 (ENSCSAG00000012935) #9 PIK3CA (ENSCSAG00000012948) #10 KCNMB3 (ENSCSAG00000012962) #11 ZNF639 (ENSCSAG00000012977) #12 MFN1 (ENSCSAG00000012988) #13 GNB4 (ENSCSAG00000012993) #14 ACTL6A (ENSCSAG00000013017) #15 ENSCSAG00000013046 #16 NDUFB5 (ENSCSAG00000013080) #17 USP13 (ENSCSAG00000013094) #18 PEX5L (ENSCSAG00000013101) #19 TTC14 (ENSCSAG00000013105) #20 CCDC39 (ENSCSAG00000013137) #21 ENSCSAG00000013166 FXR1 (ENSCSAG00000013179) #22 DNAJC19 (ENSCSAG00000013183) ##23 SOX2 (ENSCSAG00000018883) #24 ATP11B (ENSCSAG00000013201) #25 DCUN1D1 (ENSCSAG00000013212) #26 MCCC1 (ENSCSAG00000013226) #27 ENSCSAG00000013232 B3GNT5 (ENSCSAG00000018882) MCF2L2 (ENSCSAG00000013245) KLHL6 (ENSCSAG00000013258) KLHL24 (ENSCSAG00000013266) YEATS2 (ENSCSAG00000013383) MAP6D1 (ENSCSAG00000013437) PARL (ENSCSAG00000013473) ABCC5 (ENSCSAG00000013503) HTR3D (ENSCSAG00000013515) Hominoidea ANCESTRAL SPECIES 2 ENSGT00950000183039.B.a #11 ENSGT00530000063564.b.e.b ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ENSGT00390000013063 Hominidae ANCESTRAL SPECIES 2 ENSGT00910000147422 ENSGT00950000183039.B.a #11 ENSGT00530000063564.b.e.b ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ENSGT00390000013063 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00530000063564.b.e.b ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00940000158890.q ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00910000147149 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00530000063564.b.e.b ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00940000158890.q ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 ENSGT00940000155470.b Pan ANCESTRAL SPECIES 2 ENSGT00530000063564.b.e.b ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000154863.db.d ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00940000154639.n.a ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000154942.h.q.b ENSGT00940000158890.q ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00910000147572 ENSGT00940000160614 #24 ENSGT00910000146924 ENSGT00940000156162.C.k #25 ENSGT00940000154552.b.g.a #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Chimpanzee MODERN SPECIES 16 ENSPTRG00000051036 ZNF639 (ENSPTRG00000015644) #12 MFN1 (ENSPTRG00000015645) #13 GNB4 (ENSPTRG00000015646) #14 ENSPTRG00000050962 ACTL6A (ENSPTRG00000023973) #15 MRPL47 (ENSPTRG00000015648) #16 NDUFB5 (ENSPTRG00000015649) #17 USP13 (ENSPTRG00000015650) #18 PEX5L (ENSPTRG00000015651) #19 ENSPTRG00000049028 TTC14 (ENSPTRG00000015652) #20 CCDC39 (ENSPTRG00000015653) #21 ENSPTRG00000052129 ENSPTRG00000045151 ENSPTRG00000015656 #22 DNAJC19 (ENSPTRG00000030046) ##23 ENSPTRG00000047311 SOX2 (ENSPTRG00000030045) #24 ENSPTRG00000050568 ENSPTRG00000047631 ATP11B (ENSPTRG00000015660) #25 DCUN1D1 (ENSPTRG00000015661) #26 MCCC1 (ENSPTRG00000015662) #27 LAMP3 (ENSPTRG00000015663) MCF2L2 (ENSPTRG00000015665) B3GNT5 (ENSPTRG00000015666) KLHL6 (ENSPTRG00000015667) KLHL24 (ENSPTRG00000015669) YEATS2 (ENSPTRG00000015670) MAP6D1 (ENSPTRG00000015672) Bonobo MODERN SPECIES 16 ENSPPAG00000040290 ZNF639 (ENSPPAG00000031214) #12 MFN1 (ENSPPAG00000043805) #13 GNB4 (ENSPPAG00000043825) #14 ENSPPAG00000031844 ACTL6A (ENSPPAG00000031814) #15 MRPL47 (ENSPPAG00000028033) #16 NDUFB5 (ENSPPAG00000032519) #17 USP13 (ENSPPAG00000001256) #18 PEX5L (ENSPPAG00000036179) #19 ENSPPAG00000001167 TTC14 (ENSPPAG00000040361) #20 CCDC39 (ENSPPAG00000027438) #21 ENSPPAG00000015512 ENSPPAG00000043783 ENSPPAG00000037630 #22 DNAJC19 (ENSPPAG00000019978) ##23 ENSPPAG00000027884 SOX2 (ENSPPAG00000041083) #24 ENSPPAG00000036037 ENSPPAG00000039113 ATP11B (ENSPPAG00000039428) #25 DCUN1D1 (ENSPPAG00000029981) #26 MCCC1 (ENSPPAG00000036167) #27 LAMP3 (ENSPPAG00000027592) MCF2L2 (ENSPPAG00000032914) B3GNT5 (ENSPPAG00000000714) KLHL6 (ENSPPAG00000028141) KLHL24 (ENSPPAG00000034331) YEATS2 (ENSPPAG00000015640) PARL (ENSPPAG00000037739) Human MODERN SPECIES 15 KCNMB2 (ENSG00000197584) #8 ENSG00000275163 ZMAT3 (ENSG00000172667) #9 PIK3CA (ENSG00000121879) #10 KCNMB3 (ENSG00000171121) #11 ZNF639 (ENSG00000121864) #12 MFN1 (ENSG00000171109) #13 GNB4 (ENSG00000114450) #14 ACTL6A (ENSG00000136518) #15 MRPL47 (ENSG00000136522) #16 NDUFB5 (ENSG00000136521) #17 USP13 (ENSG00000058056) #18 PEX5L (ENSG00000114757) #19 TTC14 (ENSG00000163728) #20 CCDC39 (ENSG00000284862) #21 FXR1 (ENSG00000114416) #22 DNAJC19 (ENSG00000205981) ##23 SOX2 (ENSG00000181449) #24 ATP11B (ENSG00000058063) #25 DCUN1D1 (ENSG00000043093) #26 MCCC1 (ENSG00000078070) #27 LAMP3 (ENSG00000078081) MCF2L2 (ENSG00000053524) B3GNT5 (ENSG00000176597) KLHL6 (ENSG00000172578) KLHL24 (ENSG00000114796) YEATS2 (ENSG00000163872) ENSG00000283765 MAP6D1 (ENSG00000180834) PARL (ENSG00000175193) ABCC5 (ENSG00000114770) Gorilla MODERN SPECIES 16 ENSGGOG00000041059 ZNF639 (ENSGGOG00000025664) #12 MFN1 (ENSGGOG00000009357) #13 GNB4 (ENSGGOG00000026248) #14 ENSGGOG00000002247 ACTL6A (ENSGGOG00000015710) #15 MRPL47 (ENSGGOG00000027171) #16 NDUFB5 (ENSGGOG00000005222) #17 USP13 (ENSGGOG00000034809) #18 PEX5L (ENSGGOG00000003000) #19 ENSGGOG00000043452 TTC14 (ENSGGOG00000003335) #20 CCDC39 (ENSGGOG00000034953) #21 ENSGGOG00000041279 ENSGGOG00000025632 ENSGGOG00000009957 #22 DNAJC19 (ENSGGOG00000009120) ##23 ENSGGOG00000040038 ENSGGOG00000013813 ENSGGOG00000037039 ENSGGOG00000022832 ATP11B (ENSGGOG00000023125) #25 DCUN1D1 (ENSGGOG00000010767) #26 MCCC1 (ENSGGOG00000002784) #27 LAMP3 (ENSGGOG00000005729) MCF2L2 (ENSGGOG00000005734) B3GNT5 (ENSGGOG00000038086) KLHL6 (ENSGGOG00000010394) KLHL24 (ENSGGOG00000028174) YEATS2 (ENSGGOG00000003713) ENSGGOG00000044009 Orangutan MODERN SPECIES 16 ENSPPYG00000014315 #9 PIK3CA (ENSPPYG00000025901) #10 ENSPPYG00000034294 KCNMB3 (ENSPPYG00000014316) #11 ZNF639 (ENSPPYG00000031916) #12 MFN1 (ENSPPYG00000014318) #13 GNB4 (ENSPPYG00000040073) #14 ENSPPYG00000040586 ACTL6A (ENSPPYG00000014320) #15 MRPL47 (ENSPPYG00000014321) #16 NDUFB5 (ENSPPYG00000037815) #17 USP13 (ENSPPYG00000014322) #18 PEX5L (ENSPPYG00000014323) #19 ENSPPYG00000014324 #20 CCDC39 (ENSPPYG00000014325) #21 FXR1 (ENSPPYG00000014327) #22 DNAJC19 (ENSPPYG00000014328) ##23 SOX2 (ENSPPYG00000014330) #24 ENSPPYG00000031318 ATP11B (ENSPPYG00000029655) #25 ENSPPYG00000029837 #26 MCCC1 (ENSPPYG00000014331) #27 LAMP3 (ENSPPYG00000014332) MCF2L2 (ENSPPYG00000014333) B3GNT5 (ENSPPYG00000032259) KLHL6 (ENSPPYG00000029418) KLHL24 (ENSPPYG00000014335) YEATS2 (ENSPPYG00000014336) MAP6D1 (ENSPPYG00000035906) PARL (ENSPPYG00000014338) ABCC5 (ENSPPYG00000014339) Gibbon DUPLICATION Gibbon MODERN SPECIES 1 ENSNLEG00000005735 #11 ENSNLEG00000031548 ZNF639 (ENSNLEG00000005744) #12 MFN1 (ENSNLEG00000005745) #13 GNB4 (ENSNLEG00000005751) #14 ENSNLEG00000035220 ACTL6A (ENSNLEG00000035913) #15 MRPL47 (ENSNLEG00000005831) #16 NDUFB5 (ENSNLEG00000034646) #17 USP13 (ENSNLEG00000005851) #18 PEX5L (ENSNLEG00000005874) #19 ENSNLEG00000030368 TTC14 (ENSNLEG00000005900) #20 CCDC39 (ENSNLEG00000005916) #21 ENSNLEG00000033880 FXR1 (ENSNLEG00000005928) #22 DNAJC19 (ENSNLEG00000033702) ##23 SOX2 (ENSNLEG00000018940) #24 ENSNLEG00000032218 ENSNLEG00000030225 ENSNLEG00000032897 ATP11B (ENSNLEG00000005959) #25 DCUN1D1 (ENSNLEG00000005983) #26 MCCC1 (ENSNLEG00000005989) #27 LAMP3 (ENSNLEG00000006034) MCF2L2 (ENSNLEG00000006037) B3GNT5 (ENSNLEG00000018942) ENSNLEG00000006063 KLHL24 (ENSNLEG00000006066) YEATS2 (ENSNLEG00000006070) ENSNLEG00000034670 Gibbon MODERN SPECIES 1 SLC38A2 (ENSNLEG00000017915) SLC38A1 (ENSNLEG00000029941) SCAF11 (ENSNLEG00000017918) ARID2 (ENSNLEG00000017919) ANO6 (ENSNLEG00000017920) DBX2 (ENSNLEG00000017924) NELL2 (ENSNLEG00000017926) ENSNLEG00000031581 TMEM117 (ENSNLEG00000017929) TWF1 (ENSNLEG00000017931) IRAK4 (ENSNLEG00000017933) PUS7L (ENSNLEG00000017934) ADAMTS20 (ENSNLEG00000017936) ENSNLEG00000028656 PRICKLE1 (ENSNLEG00000017938) ENSNLEG00000031391 #22 ZCRB1 (ENSNLEG00000017944) ENSNLEG00000027269 ENSNLEG00000017941 YAF2 (ENSNLEG00000017946) GXYLT1 (ENSNLEG00000028842) PDZRN4 (ENSNLEG00000017948) CNTN1 (ENSNLEG00000017950) LRRK2 (ENSNLEG00000017957) SLC2A13 (ENSNLEG00000017960) C12orf40 (ENSNLEG00000017961) ABCD2 (ENSNLEG00000017963) KIF21A (ENSNLEG00000017964) CPNE8 (ENSNLEG00000030228) ENSNLEG00000032571 ENSNLEG00000033997 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Eulipotyphla ANCESTRAL SPECIES 2101 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 Common shrew MODERN SPECIES 1104 FXR1 (ENSSARG00000011976) #22 ENSSARG00000011992 ##23 Hedgehog MODERN SPECIES 1621 FXR1 (ENSEEUG00000006823) #22 DNAJC19 (ENSEEUG00000006955) ##23 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b ENSGT00940000156739.b.b.a Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b ENSGT00940000156739.b.b.a Chiroptera ANCESTRAL SPECIES 13 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941.h #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b ENSGT00940000156739.b.b.a Microchiroptera ANCESTRAL SPECIES 11 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941.h #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b ENSGT00940000156739.b.b.a Microbat MODERN SPECIES 951 KCNMB2 (ENSMLUG00000006514) #8 ZMAT3 (ENSMLUG00000013074) #9 PIK3CA (ENSMLUG00000009229) #10 KCNMB3 (ENSMLUG00000009263) #11 ZNF639 (ENSMLUG00000007597) #12 MFN1 (ENSMLUG00000007603) #13 GNB4 (ENSMLUG00000007640) #14 ACTL6A (ENSMLUG00000024899) #15 MRPL47 (ENSMLUG00000000996) #16 NDUFB5 (ENSMLUG00000000999) #17 USP13 (ENSMLUG00000013714) #18 PEX5L (ENSMLUG00000011630) #19 ENSMLUG00000028182 TTC14 (ENSMLUG00000010448) #20 CCDC39 (ENSMLUG00000010487) #21 FXR1 (ENSMLUG00000006840) #22 ENSMLUG00000006865 ##23 SOX2 (ENSMLUG00000013015) #24 ENSMLUG00000006369 ATP11B (ENSMLUG00000000492) #25 DCUN1D1 (ENSMLUG00000012251) #26 MCCC1 (ENSMLUG00000012257) #27 LAMP3 (ENSMLUG00000012272) B3GNT5 (ENSMLUG00000017017) MCF2L2 (ENSMLUG00000017007) KLHL6 (ENSMLUG00000005156) KLHL24 (ENSMLUG00000005165) YEATS2 (ENSMLUG00000004493) ENSMLUG00000027253 PARL (ENSMLUG00000004507) ABCC5 (ENSMLUG00000010786) Greater horseshoe bat MODERN SPECIES 11 ZMAT3 (ENSRFEG00010000131) #9 ENSRFEG00010000122 PIK3CA (ENSRFEG00010021761) #10 ENSRFEG00010021748 #11 ZNF639 (ENSRFEG00010021744) #12 MFN1 (ENSRFEG00010021730) #13 GNB4 (ENSRFEG00010021722) #14 ACTL6A (ENSRFEG00010021704) #15 MRPL47 (ENSRFEG00010021687) #16 ENSRFEG00010021670 #17 USP13 (ENSRFEG00010021639) #18 ENSRFEG00010021630 PEX5L (ENSRFEG00010021467) #19 TTC14 (ENSRFEG00010021404) #20 CCDC39 (ENSRFEG00010021385) #21 FXR1 (ENSRFEG00010021302) #22 DNAJC19 (ENSRFEG00010021277) ##23 ENSRFEG00010021268 ENSRFEG00010021250 ENSRFEG00010021233 ATP11B (ENSRFEG00010021177) #25 DCUN1D1 (ENSRFEG00010021156) #26 ENSRFEG00010021147 MCCC1 (ENSRFEG00010021096) #27 ENSRFEG00010021072 B3GNT5 (ENSRFEG00010021062) MCF2L2 (ENSRFEG00010021002) ENSRFEG00010020947 KLHL24 (ENSRFEG00010020928) ENSRFEG00010020902 YEATS2 (ENSRFEG00010020847) Megabat MODERN SPECIES 20 FXR1 (ENSPVAG00000002823) #22 DNAJC19 (ENSPVAG00000002826) ##23 Equus ANCESTRAL SPECIES 19 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000163715.a ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b ENSGT00940000156739.b.b.a Horse MODERN SPECIES 10 KCNMB2 (ENSECAG00000009088) #8 ZMAT3 (ENSECAG00000012784) #9 PIK3CA (ENSECAG00000015019) #10 KCNMB3 (ENSECAG00000014580) #11 ZNF639 (ENSECAG00000015691) #12 MFN1 (ENSECAG00000018551) #13 GNB4 (ENSECAG00000008196) #14 ACTL6A (ENSECAG00000013622) #15 MRPL47 (ENSECAG00000018545) #16 NDUFB5 (ENSECAG00000000682) #17 USP13 (ENSECAG00000004152) #18 PEX5L (ENSECAG00000006506) #19 ENSECAG00000057496 TTC14 (ENSECAG00000014616) #20 CCDC39 (ENSECAG00000021390) #21 FXR1 (ENSECAG00000007560) #22 ENSECAG00000034995 DNAJC19 (ENSECAG00000009331) ##23 ENSECAG00000051089 SOX2 (ENSECAG00000010653) #24 ATP11B (ENSECAG00000016912) #25 ENSECAG00000045511 DCUN1D1 (ENSECAG00000021365) #26 MCCC1 (ENSECAG00000008214) #27 LAMP3 (ENSECAG00000008113) MCF2L2 (ENSECAG00000008905) B3GNT5 (ENSECAG00000001863) ENSECAG00000049566 KLHL6 (ENSECAG00000016531) KLHL24 (ENSECAG00000021066) YEATS2 (ENSECAG00000008585) Donkey MODERN SPECIES 25 TBL1XR1 (ENSEASG00005016897) KCNMB2 (ENSEASG00005016891) #8 ZMAT3 (ENSEASG00005016887) #9 PIK3CA (ENSEASG00005016884) #10 ENSEASG00005016880 #11 ZNF639 (ENSEASG00005016879) #12 MFN1 (ENSEASG00005016871) #13 GNB4 (ENSEASG00005016867) #14 ACTL6A (ENSEASG00005016862) #15 MRPL47 (ENSEASG00005016858) #16 NDUFB5 (ENSEASG00005016854) #17 USP13 (ENSEASG00005016850) #18 PEX5L (ENSEASG00005016845) #19 TTC14 (ENSEASG00005016838) #20 CCDC39 (ENSEASG00005016830) #21 FXR1 (ENSEASG00005016818) #22 DNAJC19 (ENSEASG00005016812) ##23 SOX2 (ENSEASG00005038258) #24 ATP11B (ENSEASG00005016115) #25 DCUN1D1 (ENSEASG00005016038) #26 MCCC1 (ENSEASG00005015339) #27 ENSEASG00005015308 MCF2L2 (ENSEASG00005015300) B3GNT5 (ENSEASG00005038666) ENSEASG00005028355 ENSEASG00005015289 KLHL24 (ENSEASG00005015287) YEATS2 (ENSEASG00005015265) MAP6D1 (ENSEASG00005026951) PARL (ENSEASG00005015210) ABCC5 (ENSEASG00005014831) Carnivora ANCESTRAL SPECIES 10 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00990000203899 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B Caniformia ANCESTRAL SPECIES ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00960000193213 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00990000203899 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000154345.b ENSGT00390000006548.b.j.b ENSGT00940000154345.a ENSGT00940000156789 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.z #17 ENSGT00940000157401 #18 ENSGT00960000193213 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00390000006548.b.j.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B Ursidae ANCESTRAL SPECIES 1 ENSGT00950000185097.a ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.z #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b.kb Ursus ANCESTRAL SPECIES 22 ENSGT00950000185097.a ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.z #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b.kb Polar bear MODERN SPECIES 270 KCNMB2 (ENSUMAG00000007875) #8 ZMAT3 (ENSUMAG00000007847) #9 PIK3CA (ENSUMAG00000007616) #10 KCNMB3 (ENSUMAG00000007593) #11 ZNF639 (ENSUMAG00000007588) #12 MFN1 (ENSUMAG00000007570) #13 GNB4 (ENSUMAG00000007558) #14 ACTL6A (ENSUMAG00000007556) #15 MRPL47 (ENSUMAG00000007554) #16 NDUFB5 (ENSUMAG00000007550) #17 USP13 (ENSUMAG00000007534) #18 PEX5L (ENSUMAG00000007206) #19 ENSUMAG00000007106 #20 ENSUMAG00000007101 #20 CCDC39 (ENSUMAG00000007079) #21 FXR1 (ENSUMAG00000007061) #22 ENSUMAG00000007051 ##23 SOX2 (ENSUMAG00000007022) #24 ATP11B (ENSUMAG00000006982) #25 DCUN1D1 (ENSUMAG00000006934) #26 MCCC1 (ENSUMAG00000006927) #27 LAMP3 (ENSUMAG00000006918) B3GNT5 (ENSUMAG00000006915) ENSUMAG00000006910 MCF2L2 (ENSUMAG00000006845) KLHL6 (ENSUMAG00000006797) KLHL24 (ENSUMAG00000006792) YEATS2 (ENSUMAG00000006587) PARL (ENSUMAG00000006500) ENSUMAG00000006485 ENSUMAG00000006482 American black bear MODERN SPECIES 2951 FXR1 (ENSUAMG00000006833) #22 DNAJC19 (ENSUAMG00000006832) ##23 Giant Panda MODERN SPECIES ENSAMEG00000028254 KCNMB2 (ENSAMEG00000010737) #8 ZMAT3 (ENSAMEG00000010742) #9 PIK3CA (ENSAMEG00000010753) #10 KCNMB3 (ENSAMEG00000010807) #11 ZNF639 (ENSAMEG00000010809) #12 MFN1 (ENSAMEG00000010816) #13 GNB4 (ENSAMEG00000010842) #14 ACTL6A (ENSAMEG00000010856) #15 MRPL47 (ENSAMEG00000010876) #16 NDUFB5 (ENSAMEG00000023963) #17 USP13 (ENSAMEG00000010896) #18 PEX5L (ENSAMEG00000010981) #19 TTC14 (ENSAMEG00000011013) #20 CCDC39 (ENSAMEG00000011032) #21 FXR1 (ENSAMEG00000012185) #22 ENSAMEG00000029101 Sox2 (ENSAMEG00000011029) #24 ATP11B (ENSAMEG00000015884) #25 DCUN1D1 (ENSAMEG00000015937) #26 MCCC1 (ENSAMEG00000015967) #27 LAMP3 (ENSAMEG00000015997) B3GNT5 (ENSAMEG00000019887) KLHL6 (ENSAMEG00000017427) KLHL24 (ENSAMEG00000017409) YEATS2 (ENSAMEG00000017390) MAP6D1 (ENSAMEG00000017388) PARL (ENSAMEG00000017375) ABCC5 (ENSAMEG00000017331) ENSAMEG00000017325 ENSAMEG00000028286 Mustelinae ANCESTRAL SPECIES 20 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.z #17 ENSGT00940000157401 #18 ENSGT00960000193213 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154502.`b.b.b ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00390000006548.b.j.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B Ferret MODERN SPECIES 176 TTC14 (ENSMPUG00000002322) #20 CCDC39 (ENSMPUG00000002324) #21 FXR1 (ENSMPUG00000002333) #22 DNAJC19 (ENSMPUG00000002336) ##23 ENSMPUG00000002351 ATP11B (ENSMPUG00000002361) #25 DCUN1D1 (ENSMPUG00000002369) #26 MCCC1 (ENSMPUG00000002371) #27 LAMP3 (ENSMPUG00000002377) MCF2L2 (ENSMPUG00000002378) B3GNT5 (ENSMPUG00000019270) KLHL6 (ENSMPUG00000002389) KLHL24 (ENSMPUG00000002390) ENSMPUG00000019273 YEATS2 (ENSMPUG00000002394) MAP6D1 (ENSMPUG00000002396) PARL (ENSMPUG00000002398) ABCC5 (ENSMPUG00000002400) American mink MODERN SPECIES 118 ZMAT3 (ENSNVIG00000018146) #9 PIK3CA (ENSNVIG00000018130) #10 KCNMB3 (ENSNVIG00000018086) #11 ZNF639 (ENSNVIG00000018071) #12 MFN1 (ENSNVIG00000018002) #13 GNB4 (ENSNVIG00000017705) #14 ACTL6A (ENSNVIG00000017593) #15 MRPL47 (ENSNVIG00000017553) #16 NDUFB5 (ENSNVIG00000017522) #17 USP13 (ENSNVIG00000017445) #18 ENSNVIG00000017429 E9PH97 (ENSNVIG00000016959) #19 TTC14 (ENSNVIG00000016897) #20 CCDC39 (ENSNVIG00000016850) #21 FXR1 (ENSNVIG00000016628) #22 ENSNVIG00000016582 ##23 ENSNVIG00000016571 SOX2 (ENSNVIG00000016538) #24 ENSNVIG00000016527 ATP11B (ENSNVIG00000016435) #25 DCUN1D1 (ENSNVIG00000016385) #26 MCCA (ENSNVIG00000016260) #27 LAMP3 (ENSNVIG00000016242) B3GNT5 (ENSNVIG00000016238) ENSNVIG00000016235 MF2L2 (ENSNVIG00000016107) KLHL6 (ENSNVIG00000016052) ENSNVIG00000016043 KLH24 (ENSNVIG00000016026) YEATS2 (ENSNVIG00000015940) Canidae ANCESTRAL SPECIES 43 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.w #17 ENSGT00940000157401 #18 ENSGT00960000193213 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00390000006548.b.j.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Canis_lupus ANCESTRAL SPECIES 41 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.w #17 ENSGT00940000157401 #18 ENSGT00960000193213 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000154345.b ENSGT00390000006548.b.j.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b Dog MODERN SPECIES 27 ENSCAFG00845015451 ENSCAFG00845015500 ENSCAFG00845015527 #9 PIK3CA (ENSCAFG00845015587) #10 KCNMB3 (ENSCAFG00845015706) #11 ZNF639 (ENSCAFG00845015781) #12 MFN1 (ENSCAFG00845015841) #13 GNB4 (ENSCAFG00845016005) #14 ACTL6A (ENSCAFG00845016262) #15 MRPL47 (ENSCAFG00845016380) #16 NDUFB5 (ENSCAFG00845016589) #17 USP13 (ENSCAFG00845016860) #18 PEX5L (ENSCAFG00845017545) #19 TTC14 (ENSCAFG00845018663) #20 CCDC39 (ENSCAFG00845018860) #21 FXR1 (ENSCAFG00845019374) #22 DNAJC19 (ENSCAFG00845020070) ##23 ATP11B (ENSCAFG00845020449) #25 DCUN1D1 (ENSCAFG00845021251) #26 MCCC1 (ENSCAFG00845021386) #27 ENSCAFG00845021628 MCF2L2 (ENSCAFG00845021833) KLHL6 (ENSCAFG00845022563) ENSCAFG00845022671 KLHL24 (ENSCAFG00845022711) YEATS2 (ENSCAFG00845023023) ENSCAFG00845023901 MAP6D1 (ENSCAFG00845023943) PARL (ENSCAFG00845024017) ABCC5 (ENSCAFG00845024339) ENSCAFG00845025304 Dingo MODERN SPECIES 159 PIK3CA (ENSCAFG00020023109) #10 KCNMB3 (ENSCAFG00020023112) #11 ZNF639 (ENSCAFG00020023113) #12 MFN1 (ENSCAFG00020023114) #13 GNB4 (ENSCAFG00020023115) #14 ACTL6A (ENSCAFG00020023126) #15 MRPL47 (ENSCAFG00020023127) #16 ENSCAFG00020023129 #17 ENSCAFG00020023130 ENSCAFG00020023131 USP13 (ENSCAFG00020023133) #18 ENSCAFG00020023137 PEX5L (ENSCAFG00020023148) #19 TTC14 (ENSCAFG00020023505) #20 CCDC39 (ENSCAFG00020023514) #21 FXR1 (ENSCAFG00020023527) #22 ENSCAFG00020023532 ##23 SOX2 (ENSCAFG00020023541) #24 ENSCAFG00020023545 ATP11B (ENSCAFG00020000213) #25 DCUN1D1 (ENSCAFG00020000986) #26 MCCC1 (ENSCAFG00020001000) #27 ENSCAFG00020001021 MCF2L2 (ENSCAFG00020001083) B3GNT5 (ENSCAFG00020001231) KLHL6 (ENSCAFG00020001252) ENSCAFG00020001264 KLHL24 (ENSCAFG00020001271) YEATS2 (ENSCAFG00020001349) MAP6D1 (ENSCAFG00020002085) PARL (ENSCAFG00020002113) Red fox MODERN SPECIES 63 ZMAT3 (ENSVVUG00000004729) #9 PIK3CA (ENSVVUG00000004738) #10 KCNMB3 (ENSVVUG00000004756) #11 ZNF639 (ENSVVUG00000004762) #12 MFN1 (ENSVVUG00000004780) #13 GNB4 (ENSVVUG00000004802) #14 ACTL6A (ENSVVUG00000004812) #15 MRPL47 (ENSVVUG00000004837) #16 NDUFB5 (ENSVVUG00000004849) #17 USP13 (ENSVVUG00000004881) #18 PEX5L (ENSVVUG00000004951) #19 TTC14 (ENSVVUG00000006305) #20 CCDC39 (ENSVVUG00000006637) #21 ENSVVUG00000006654 FXR1 (ENSVVUG00000006660) #22 DNAJC19 (ENSVVUG00000006684) ##23 ENSVVUG00000006699 ENSVVUG00000006706 SOX2 (ENSVVUG00000006730) #24 ENSVVUG00000006736 ATP11B (ENSVVUG00000006763) #25 DCUN1D1 (ENSVVUG00000006826) #26 MCCC1 (ENSVVUG00000006835) #27 ENSVVUG00000006851 MCF2L2 (ENSVVUG00000006872) B3GNT5 (ENSVVUG00000006884) KLHL6 (ENSVVUG00000006905) ENSVVUG00000006913 KLHL24 (ENSVVUG00000006919) YEATS2 (ENSVVUG00000006927) Felidae ANCESTRAL SPECIES 9 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000172992 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b Panthera ANCESTRAL SPECIES 12 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000172992 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b Tiger MODERN SPECIES 474 ZMAT3 (ENSPTIG00000009929) #9 PIK3CA (ENSPTIG00000009726) #10 KCNMB3 (ENSPTIG00000009324) #11 ZNF639 (ENSPTIG00000009164) #12 MFN1 (ENSPTIG00000008839) #13 GNB4 (ENSPTIG00000008698) #14 ENSPTIG00000008626 ACTL6A (ENSPTIG00000008261) #15 MRPL47 (ENSPTIG00000007879) #16 NDUFB5 (ENSPTIG00000007631) #17 USP13 (ENSPTIG00000007161) #18 ENSPTIG00000009433 PEX5L (ENSPTIG00000004084) #19 TTC14 (ENSPTIG00000001841) #20 CCDC39 (ENSPTIG00000001676) #21 FXR1 (ENSPTIG00000019748) #22 DNAJC19 (ENSPTIG00000019574) ##23 ENSPTIG00000019532 ATP11B (ENSPTIG00000018956) #25 DCUN1D1 (ENSPTIG00000018800) #26 MCCC1 (ENSPTIG00000018514) #27 LAMP3 (ENSPTIG00000018429) B3GNT5 (ENSPTIG00000009347) MCF2L2 (ENSPTIG00000018188) ENSPTIG00000018091 Panthera_a ANCESTRAL SPECIES 17 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00950000182802.B.a.a.a.b.a.b ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000172992 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000164959 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000153305.c.f.a leopard MODERN SPECIES 41 ZNF639 (ENSPPRG00000002569) #12 MFN1 (ENSPPRG00000001517) #13 GNB4 (ENSPPRG00000001295) #14 ENSPPRG00000022425 ACTL6A (ENSPPRG00000000310) #15 MRPL47 (ENSPPRG00000000050) #16 ENSPPRG00000022339 NDUFB5 (ENSPPRG00000023717) #17 USP13 (ENSPPRG00000023982) #18 ENSPPRG00000022239 PEX5L (ENSPPRG00000012577) #19 ENSPPRG00000006521 TTC14 (ENSPPRG00000006127) #20 CCDC39 (ENSPPRG00000005599) #21 ENSPPRG00000005376 FXR1 (ENSPPRG00000004943) #22 DNAJC19 (ENSPPRG00000002612) ##23 SOX2 (ENSPPRG00000021752) #24 ENSPPRG00000002170 ENSPPRG00000001643 ATP11B (ENSPPRG00000001539) #25 DCUN1D1 (ENSPPRG00000000834) #26 MCCC1 (ENSPPRG00000000127) #27 LAMP3 (ENSPPRG00000023853) MCF2L2 (ENSPPRG00000024122) B3GNT5 (ENSPPRG00000021466) ENSPPRG00000013180 KLHL6 (ENSPPRG00000011045) KLHL24 (ENSPPRG00000011024) YEATS2 (ENSPPRG00000010510) MAP6D1 (ENSPPRG00000010302) lion DUPLICATION lion MODERN SPECIES 9 KCNMB2 (ENSPLOG00000014199) #8 ZMAT3 (ENSPLOG00000014350) #9 PIK3CA (ENSPLOG00000014416) #10 KCNMB3 (ENSPLOG00000014563) #11 ZNF639 (ENSPLOG00000014743) #12 MFN1 (ENSPLOG00000014785) #13 GNB4 (ENSPLOG00000014871) #14 ACTL6A (ENSPLOG00000014922) #15 MRPL47 (ENSPLOG00000015006) #16 ENSPLOG00000015221 NDUFB5 (ENSPLOG00000015246) #17 USP13 (ENSPLOG00000015359) #18 PEX5L (ENSPLOG00000015604) #19 TTC14 (ENSPLOG00000016608) #20 CCDC39 (ENSPLOG00000016889) #21 ENSPLOG00000017262 #22 DNAJC19 (ENSPLOG00000017942) ##23 SOX2 (ENSPLOG00000018057) #24 ENSPLOG00000018071 ATP11B (ENSPLOG00000018137) #25 DCUN1D1 (ENSPLOG00000018397) #26 MCCC1 (ENSPLOG00000018464) #27 LAMP3 (ENSPLOG00000018830) MCF2L2 (ENSPLOG00000018925) B3GNT5 (ENSPLOG00000019335) ENSPLOG00000019346 MB21D2 (ENSPLOG00000019380) FGF12 (ENSPLOG00000019425) ENSPLOG00000019518 CCDC50 (ENSPLOG00000019549) UTS2B (ENSPLOG00000019582) lion MODERN SPECIES 8 DLX1 (ENSPLOG00000022582) DLX2 (ENSPLOG00000022579) ITGA6 (ENSPLOG00000022569) PDK1 (ENSPLOG00000022560) RAPGEF4 (ENSPLOG00000022513) ENSPLOG00000022477 CDCA7 (ENSPLOG00000022466) SP3 (ENSPLOG00000022461) ENSPLOG00000022450 SP9 (ENSPLOG00000022443) ENSPLOG00000022440 CIR1 (ENSPLOG00000022436) SCRN3 (ENSPLOG00000022426) GPR155 (ENSPLOG00000022420) ENSPLOG00000022404 ENSPLOG00000022399 #22 WIPF1 (ENSPLOG00000022385) CHRNA1 (ENSPLOG00000022353) CHN1 (ENSPLOG00000022311) ATF2 (ENSPLOG00000022276) ATP5MC3 (ENSPLOG00000022249) LNPK (ENSPLOG00000022229) EVX2 (ENSPLOG00000022219) HOXD13 (ENSPLOG00000022213) HOXD12 (ENSPLOG00000022207) HOXD11 (ENSPLOG00000022202) HOXD10 (ENSPLOG00000022198) HOXD9 (ENSPLOG00000022195) HOXD8 (ENSPLOG00000022192) HOXD4 (ENSPLOG00000022180) HOXD3 (ENSPLOG00000022176) Cat MODERN SPECIES 240 KCNMB2 (ENSFCAG00000006044) #8 ZMAT3 (ENSFCAG00000014578) #9 PIK3CA (ENSFCAG00000018737) #10 KCNMB3 (ENSFCAG00000041547) #11 ZNF639 (ENSFCAG00000012004) #12 MFN1 (ENSFCAG00000028181) #13 GNB4 (ENSFCAG00000039564) #14 ACTL6A (ENSFCAG00000012364) #15 MRPL47 (ENSFCAG00000039093) #16 NDUFB5 (ENSFCAG00000012365) #17 USP13 (ENSFCAG00000025086) #18 PEX5L (ENSFCAG00000012367) #19 TTC14 (ENSFCAG00000027763) #20 CCDC39 (ENSFCAG00000029319) #21 ENSFCAG00000035458 FXR1 (ENSFCAG00000022259) #22 ENSFCAG00000010591 #23 ENSFCAG00000043744 ENSFCAG00000039424 ATP11B (ENSFCAG00000026272) #25 DCUN1D1 (ENSFCAG00000032259) #26 MCCC1 (ENSFCAG00000000940) #27 LAMP3 (ENSFCAG00000028212) B3GNT5 (ENSFCAG00000022706) ENSFCAG00000029159 MCF2L2 (ENSFCAG00000014298) ENSFCAG00000025637 KLHL6 (ENSFCAG00000015088) KLHL24 (ENSFCAG00000025721) YEATS2 (ENSFCAG00000003117) MAP6D1 (ENSFCAG00000044280) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Suina ANCESTRAL SPECIES 1 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000163715.a ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Chacoan peccary MODERN SPECIES 944 ZMAT3 (ENSCWAG00000013667) #9 PIK3CA (ENSCWAG00000013715) #10 KCNMB3 (ENSCWAG00000013862) #11 ZNF639 (ENSCWAG00000014049) #12 MFN1 (ENSCWAG00000014074) #13 GNB4 (ENSCWAG00000014110) #14 ACTL6A (ENSCWAG00000014148) #15 MRPL47 (ENSCWAG00000014208) #16 ENSCWAG00000014342 ENSCWAG00000014364 #17 USP13 (ENSCWAG00000014441) #18 ENSCWAG00000014493 PEX5L (ENSCWAG00000014594) #19 TTC14 (ENSCWAG00000018170) #20 CCDC39 (ENSCWAG00000018221) #21 FXR1 (ENSCWAG00000010854) #22 DNAJC19 (ENSCWAG00000011201) ##23 SOX2 (ENSCWAG00000011284) #24 ENSCWAG00000011322 ATP11B (ENSCWAG00000011359) #25 DCUN1D1 (ENSCWAG00000011613) #26 MCCC1 (ENSCWAG00000011692) #27 LAMP3 (ENSCWAG00000011926) MCF2L2 (ENSCWAG00000012097) B3GNT5 (ENSCWAG00000012261) KLHL6 (ENSCWAG00000012291) KLHL24 (ENSCWAG00000012354) ENSCWAG00000012399 YEATS2 (ENSCWAG00000012459) MAP6D1 (ENSCWAG00000012551) PARL (ENSCWAG00000012639) Pig MODERN SPECIES 4 KCNMB2 (ENSSSCG00000011761) #8 ZMAT3 (ENSSSCG00000033860) #9 PIK3CA (ENSSSCG00000030413) #10 KCNMB3 (ENSSSCG00000029240) #11 ENSSSCG00000031922 ZNF639 (ENSSSCG00000038443) #12 MFN1 (ENSSSCG00000039285) #13 GNB4 (ENSSSCG00000037583) #14 ACTL6A (ENSSSCG00000011762) #15 MRPL47 (ENSSSCG00000011763) #16 NDUFB5 (ENSSSCG00000011764) #17 USP13 (ENSSSCG00000011765) #18 PEX5L (ENSSSCG00000011766) #19 TTC14 (ENSSSCG00000011767) #20 CCDC39 (ENSSSCG00000011768) #21 FXR1 (ENSSSCG00000011769) #22 DNAJC19 (ENSSSCG00000011770) ##23 ENSSSCG00000043321 ENSSSCG00000052379 SOX2 (ENSSSCG00000062993) #24 ENSSSCG00000062332 ENSSSCG00000061239 ENSSSCG00000055503 ATP11B (ENSSSCG00000011772) #25 ENSSSCG00000036881 MCCC1 (ENSSSCG00000025942) #27 MCF2L2 (ENSSSCG00000021749) B3GNT5 (ENSSSCG00000024393) ENSSSCG00000034204 ENSSSCG00000031476 KLHL24 (ENSSSCG00000011775) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Cetacea ANCESTRAL SPECIES 10 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335.a #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Odontoceti ANCESTRAL SPECIES 9 ENSGT00950000183039.B.b.a #8 ENSGT00960000192355 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335.a #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00960000192355 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00500000045333.c.b.b ENSGT00940000156335.a #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Dolphin MODERN SPECIES 1469 TTC14 (ENSTTRG00000014660) #20 CCDC39 (ENSTTRG00000014681) #21 FXR1 (ENSTTRG00000014698) #22 DNAJC19 (ENSTTRG00000014700) ##23 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00960000192355 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00500000045333.c.b.b ENSGT00940000156335.a #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000155453.k.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00390000018829.g.b.c.a.a ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00390000001413.d ENSGT00990000211790 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 Monodontidae ANCESTRAL SPECIES 23 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00500000045333.c.b.b ENSGT00940000156335.a #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00510000046985.h.a.jd ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00940000155453.k.b ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 Beluga whale MODERN SPECIES 111 ZMAT3 (ENSDLEG00000014744) #9 PIK3CA (ENSDLEG00000014721) #10 ENSDLEG00000014709 ZNF639 (ENSDLEG00000014693) #12 MFN1 (ENSDLEG00000014635) #13 GNB4 (ENSDLEG00000014597) #14 ENSDLEG00000014581 ACTL6A (ENSDLEG00000014465) #15 MRPL47 (ENSDLEG00000014407) #16 ENSDLEG00000014388 #17 USP13 (ENSDLEG00000014351) #18 PEX5L (ENSDLEG00000012327) #19 TTC14 (ENSDLEG00000012062) #20 CCDC39 (ENSDLEG00000011994) #21 ENSDLEG00000011974 FXR1 (ENSDLEG00000011932) #22 ENSDLEG00000011911 ##23 ENSDLEG00000011882 SOX2 (ENSDLEG00000011877) #24 ENSDLEG00000011867 ATP11B (ENSDLEG00000011729) #25 ENSDLEG00000011713 DCUN1D1 (ENSDLEG00000011699) #26 ENSDLEG00000011686 ENSDLEG00000011678 MCCC1 (ENSDLEG00000011656) #27 B3GNT5 (ENSDLEG00000011651) LAMP3 (ENSDLEG00000011466) KLHL6 (ENSDLEG00000011412) KLHL24 (ENSDLEG00000011392) YEATS2 (ENSDLEG00000011294) Narwhal MODERN SPECIES 297 ENSMMNG00015002111 ZMAT3 (ENSMMNG00015002091) #9 PIK3CA (ENSMMNG00015002009) #10 ENSMMNG00015001952 ENSMMNG00015001936 #12 MFN1 (ENSMMNG00015001899) #13 GNB4 (ENSMMNG00015001871) #14 ENSMMNG00015001853 ACTL6A (ENSMMNG00015001826) #15 MRPL47 (ENSMMNG00015001795) #16 ENSMMNG00015001756 #17 USP13 (ENSMMNG00015001699) #18 PEX5L (ENSMMNG00015001374) #19 TTC14 (ENSMMNG00015001171) #20 CCDC39 (ENSMMNG00015001064) #21 FXR1 (ENSMMNG00015000882) #22 ENSMMNG00015000810 ##23 ENSMMNG00015000787 SOX2 (ENSMMNG00015000779) #24 ENSMMNG00015000768 ATP11B (ENSMMNG00015000694) #25 ENSMMNG00015000676 DCUN1D1 (ENSMMNG00015000639) #26 ENSMMNG00015000610 MCCC1 (ENSMMNG00015000549) #27 ENSMMNG00015000494 B3GNT5 (ENSMMNG00015000474) MCF2L2 (ENSMMNG00015000373) KLHL6 (ENSMMNG00015000283) ENSMMNG00015000255 YEATS2 (ENSMMNG00015000154) Vaquita MODERN SPECIES 15 PIK3CA (ENSPSNG00000000243) #10 ENSPSNG00000000310 ZNF639 (ENSPSNG00000000337) #12 MFN1 (ENSPSNG00000000400) #13 GNB4 (ENSPSNG00000000439) #14 ACTL6A (ENSPSNG00000000482) #15 ENSPSNG00000000504 MRPL47 (ENSPSNG00000000528) #16 NDUFB5 (ENSPSNG00000000597) #17 USP13 (ENSPSNG00000000641) #18 PEX5L (ENSPSNG00000000991) #19 ENSPSNG00000001427 TTC14 (ENSPSNG00000001461) #20 CCDC39 (ENSPSNG00000001552) #21 ENSPSNG00000001620 FXR1 (ENSPSNG00000001732) #22 ENSPSNG00000001824 ##23 SOX2 (ENSPSNG00000001850) #24 ENSPSNG00000001868 ENSPSNG00000001895 ENSPSNG00000001911 #25 ENSPSNG00000001934 #25 ENSPSNG00000001973 #25 DCUN1D1 (ENSPSNG00000001998) #26 ENSPSNG00000002009 ENSPSNG00000002025 MCCC1 (ENSPSNG00000002070) #27 LAMP3 (ENSPSNG00000002153) MCF2L2 (ENSPSNG00000002227) B3GNT5 (ENSPSNG00000002266) ENSPSNG00000002280 Sperm whale MODERN SPECIES ENSPCTG00005002512 ZMAT3 (ENSPCTG00005002527) #9 PIK3CA (ENSPCTG00005002544) #10 ZNF639 (ENSPCTG00005002565) #12 MFN1 (ENSPCTG00005002577) #13 GNB4 (ENSPCTG00005002602) #14 ACTL6A (ENSPCTG00005002626) #15 MRPL47 (ENSPCTG00005002655) #16 NDUFB5 (ENSPCTG00005002691) #17 USP13 (ENSPCTG00005002736) #18 PEX5L (ENSPCTG00005002908) #19 ENSPCTG00005003697 ENSPCTG00005003702 TTC14 (ENSPCTG00005003714) #20 CCDC39 (ENSPCTG00005003737) #21 FXR1 (ENSPCTG00005003785) #22 ENSPCTG00005003919 ##23 SOX2 (ENSPCTG00005003937) #24 ENSPCTG00005003941 ENSPCTG00005003956 ATP11B (ENSPCTG00005004005) #25 ENSPCTG00005005564 DCUN1D1 (ENSPCTG00005005589) #26 ENSPCTG00005005649 MCCC1 (ENSPCTG00005005715) #27 LAMP3 (ENSPCTG00005005882) MCF2L2 (ENSPCTG00005005943) B3GNT5 (ENSPCTG00005005989) KLHL6 (ENSPCTG00005006059) YEATS2 (ENSPCTG00005006122) MAP6D1 (ENSPCTG00005006390) Blue whale DUPLICATION Blue whale MODERN SPECIES 19 ALKBH3 (ENSBMSG00010013420) HSD17B12 (ENSBMSG00010013402) TTC17 (ENSBMSG00010013363) API5 (ENSBMSG00010013262) ENSBMSG00010013220 ENSBMSG00010013215 ENSBMSG00010013207 LRRC4C (ENSBMSG00010013196) ENSBMSG00010013188 ENSBMSG00010013173 RAG2 (ENSBMSG00010013164) RAG1 (ENSBMSG00010013155) TRAF6 (ENSBMSG00010013148) PRR5L (ENSBMSG00010013135) COMMD9 (ENSBMSG00010013117) ENSBMSG00010013107 #22 LDLRAD3 (ENSBMSG00010013096) ENSBMSG00010013080 FJX1 (ENSBMSG00010013062) PAMR1 (ENSBMSG00010013047) SLC1A2 (ENSBMSG00010012885) CD44 (ENSBMSG00010012733) ENSBMSG00010012689 PDHX (ENSBMSG00010013305) APIP (ENSBMSG00010013281) EHF (ENSBMSG00010013242) ELF5 (ENSBMSG00010013193) CAT (ENSBMSG00010013166) ABTB2 (ENSBMSG00010013147) NAT10 (ENSBMSG00010013127) CAPRIN1 (ENSBMSG00010013072) Blue whale MODERN SPECIES 15 ENSBMSG00010003697 CRYGB (ENSBMSG00010003704) CRYGA (ENSBMSG00010003714) ENSBMSG00010003722 ZNF639 (ENSBMSG00010003730) #12 MFN1 (ENSBMSG00010003738) #13 GNB4 (ENSBMSG00010003748) #14 ENSBMSG00010003758 #15 MRPL47 (ENSBMSG00010003775) #16 NDUFB5 (ENSBMSG00010003799) #17 USP13 (ENSBMSG00010003825) #18 ENSBMSG00010003863 PEX5L (ENSBMSG00010003978) #19 TTC14 (ENSBMSG00010004833) #20 CCDC39 (ENSBMSG00010004860) #21 ENSBMSG00010004914 #22 ENSBMSG00010004956 ##23 SOX2 (ENSBMSG00010004972) #24 ATP11B (ENSBMSG00010006023) #25 DCUN1D1 (ENSBMSG00010006245) #26 ENSBMSG00010006269 ENSBMSG00010006280 MCCC1 (ENSBMSG00010006304) #27 LAMP3 (ENSBMSG00010006362) MCF2L2 (ENSBMSG00010006391) B3GNT5 (ENSBMSG00010006443) KLHL6 (ENSBMSG00010006477) KLHL24 (ENSBMSG00010006493) YEATS2 (ENSBMSG00010006529) MAP6D1 (ENSBMSG00010006549) ENSBMSG00010006580 Pecora ANCESTRAL SPECIES 8 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Yarkand deer MODERN SPECIES 10 KCNMB2 (ENSCHYG00000021244) #8 ZMAT3 (ENSCHYG00000021162) #9 PIK3CA (ENSCHYG00000020926) #10 ENSCHYG00000020552 #11 ZNF639 (ENSCHYG00000020480) #12 MFN1 (ENSCHYG00000020157) #13 GNB4 (ENSCHYG00000020053) #14 ACTL6A (ENSCHYG00000019950) #15 MRPL47 (ENSCHYG00000019750) #16 NDUFB5 (ENSCHYG00000019479) #17 USP13 (ENSCHYG00000018967) #18 PEX5L (ENSCHYG00000017068) #19 ENSCHYG00000016977 TTC14 (ENSCHYG00000016786) #20 CCDC39 (ENSCHYG00000016666) #21 FXR1 (ENSCHYG00000015742) #22 DNAJC19 (ENSCHYG00000015489) ##23 ATP11B (ENSCHYG00000013977) #25 ENSCHYG00000013883 DCUN1D1 (ENSCHYG00000013798) #26 ENSCHYG00000013773 MCCC1 (ENSCHYG00000013336) #27 LAMP3 (ENSCHYG00000013102) MCF2L2 (ENSCHYG00000013028) ENSCHYG00000012973 ENSCHYG00000012825 KLHL24 (ENSCHYG00000012697) ENSCHYG00000012636 YEATS2 (ENSCHYG00000011810) PARL (ENSCHYG00000011557) ABCC5 (ENSCHYG00000011061) Percora_a ANCESTRAL SPECIES 7 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Bovidae ANCESTRAL SPECIES 9 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Caprinae ANCESTRAL SPECIES 8 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000173300 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000155470.b Goat MODERN SPECIES PIK3CA (ENSCHIG00000016154) #10 KCNMB3 (ENSCHIG00000021624) #11 ZNF639 (ENSCHIG00000025519) #12 MFN1 (ENSCHIG00000021326) #13 GNB4 (ENSCHIG00000011036) #14 ACTL6A (ENSCHIG00000017016) #15 MRPL47 (ENSCHIG00000013922) #16 NDUFB5 (ENSCHIG00000024994) #17 USP13 (ENSCHIG00000020163) #18 ENSCHIG00000017176 PEX5L (ENSCHIG00000021885) #19 TTC14 (ENSCHIG00000013993) #20 CCDC39 (ENSCHIG00000025334) #21 ENSCHIG00000002251 ENSCHIG00000025304 FXR1 (ENSCHIG00000017202) #22 ENSCHIG00000022989 ##23 SOX2 (ENSCHIG00000011126) #24 ENSCHIG00000018528 ENSCHIG00000026896 ATP11B (ENSCHIG00000006700) #25 DCUN1D1 (ENSCHIG00000012704) #26 MCCC1 (ENSCHIG00000025794) #27 ENSCHIG00000012113 B3GNT5 (ENSCHIG00000007874) MCF2L2 (ENSCHIG00000012229) ENSCHIG00000023082 KLHL24 (ENSCHIG00000021673) ENSCHIG00000010607 MAP6D1 (ENSCHIG00000017564) YEATS2 (ENSCHIG00000013530) Rambouillet Sheep MODERN SPECIES ENSOARG00020000133 KCNMB2 (ENSOARG00020000078) #8 ZMAT3 (ENSOARG00020000075) #9 PIK3CA (ENSOARG00020010030) #10 ENSOARG00020009952 #11 ZNF639 (ENSOARG00020009893) #12 MFN1 (ENSOARG00020009679) #13 GNB4 (ENSOARG00020009587) #14 ACTL6A (ENSOARG00020009394) #15 MRPL47 (ENSOARG00020009272) #16 NDUFB5 (ENSOARG00020009071) #17 USP13 (ENSOARG00020008860) #18 PEX5L (ENSOARG00020007531) #19 CCDC39 (ENSOARG00020006964) #21 TTC14 (ENSOARG00020006723) #20 FXR1 (ENSOARG00020005863) #22 DNAJC19 (ENSOARG00020005775) ##23 SOX2 (ENSOARG00020005758) #24 ENSOARG00020005742 ATP11B (ENSOARG00020005548) #25 DCUN1D1 (ENSOARG00020005500) #26 MCCC1 (ENSOARG00020005367) #27 ENSOARG00020005267 B3GNT5 (ENSOARG00020005246) MCF2L2 (ENSOARG00020005175) KLHL6 (ENSOARG00020005141) KLHL24 (ENSOARG00020005097) YEATS2 (ENSOARG00020004961) MAP6D1 (ENSOARG00020004912) PARL (ENSOARG00020004881) ABCC5 (ENSOARG00020004748) Bovinae ANCESTRAL SPECIES 6 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000153525.g.b.a.n ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Bos ANCESTRAL SPECIES 7 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931.f #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000153525.g.b.a.n ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00390000017491.t.t.a.a ENSGT00940000163497 Bos_a ANCESTRAL SPECIES 5 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931.f #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000153525.g.b.a.n ENSGT00940000161734 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00390000017491.t.t.a.a ENSGT00940000163497 Wild yak MODERN SPECIES 495 KCNMB2 (ENSBMUG00000016601) #8 ZMAT3 (ENSBMUG00000016617) #9 PIK3CA (ENSBMUG00000016649) #10 ENSBMUG00000016675 #11 ENSBMUG00000016679 ZNF639 (ENSBMUG00000016692) #12 MFN1 (ENSBMUG00000016720) #13 GNB4 (ENSBMUG00000016733) #14 ACTL6A (ENSBMUG00000016746) #15 MRPL47 (ENSBMUG00000016765) #16 NDUFB5 (ENSBMUG00000016813) #17 USP13 (ENSBMUG00000016857) #18 PEX5L (ENSBMUG00000017113) #19 TTC14 (ENSBMUG00000017289) #20 CCDC39 (ENSBMUG00000017317) #21 FXR1 (ENSBMUG00000017444) #22 ENSBMUG00000017548 ##23 ENSBMUG00000017572 ATP11B (ENSBMUG00000017711) #25 DCUN1D1 (ENSBMUG00000017739) #26 MCCC1 (ENSBMUG00000017803) #27 ENSBMUG00000017850 MCF2L2 (ENSBMUG00000017904) ENSBMUG00000017918 Domestic yak MODERN SPECIES KCNMB2 (ENSBGRG00000003278) #8 ZMAT3 (ENSBGRG00000003264) #9 PIK3CA (ENSBGRG00000003231) #10 ENSBGRG00000003201 #11 ENSBGRG00000003193 ENSBGRG00000003185 MFN1 (ENSBGRG00000003142) #13 GNB4 (ENSBGRG00000003113) #14 ACTL6A (ENSBGRG00000003086) #15 MRPL47 (ENSBGRG00000003051) #16 NDUFB5 (ENSBGRG00000003013) #17 USP13 (ENSBGRG00000002861) #18 ENSBGRG00000002451 #19 TTC14 (ENSBGRG00000002327) #20 CCDC39 (ENSBGRG00000002146) #21 FXR1 (ENSBGRG00000001900) #22 DNAJC19 (ENSBGRG00000001844) ##23 ATP11B (ENSBGRG00000001781) #25 DCUN1D1 (ENSBGRG00000001763) #26 MCCC1 (ENSBGRG00000001725) #27 ENSBGRG00000001692 B3GNT5 (ENSBGRG00000001683) ENSBGRG00000001679 MCF2L2 (ENSBGRG00000001502) KLHL6 (ENSBGRG00000001459) KLHL24 (ENSBGRG00000001442) ENSBGRG00000001430 YEATS2 (ENSBGRG00000001414) MAP6D1 (ENSBGRG00000001403) PARL (ENSBGRG00000001380) ENSBGRG00000001362 Bos_b ANCESTRAL SPECIES 5 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931.f #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000153525.g.b.a.n ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00390000017491.t.t.a.a ENSGT00940000163497 Hybrid Bos Indicus MODERN SPECIES PIK3CA (ENSBIXG00005017279) #10 KCNMB3 (ENSBIXG00005002817) #11 ZNF639 (ENSBIXG00005017422) #12 ENSBIXG00005017430 MFN1 (ENSBIXG00005007801) #13 GNB4 (ENSBIXG00005017563) #14 ACTL6A (ENSBIXG00005017648) #15 MRPL47 (ENSBIXG00005017737) #16 NDUFB5 (ENSBIXG00005017808) #17 ENSBIXG00005017824 USP13 (ENSBIXG00005017875) #18 PEX5L (ENSBIXG00005018250) #19 TTC14 (ENSBIXG00005018361) #20 CCDC39 (ENSBIXG00005018434) #21 ENSBIXG00005018457 FXR1 (ENSBIXG00005000056) #22 ENSBIXG00005003104 ##23 ATP11B (ENSBIXG00005003151) #25 DCUN1D1 (ENSBIXG00005019545) #26 MCCC1 (ENSBIXG00005019762) #27 ENSBIXG00005019865 B3GNT5 (ENSBIXG00005019925) ENSBIXG00005019943 MCF2L2 (ENSBIXG00005019985) ENSBIXG00005020055 KLHL24 (ENSBIXG00005020085) ENSBIXG00005020097 YEATS2 (ENSBIXG00005020144) MAP6D1 (ENSBIXG00005003322) PARL (ENSBIXG00005020209) ENSBIXG00005003364 Cow MODERN SPECIES ZMAT3 (ENSBTAG00000012463) #9 ENSBTAG00000054655 PIK3CA (ENSBTAG00000009232) #10 KCNMB3 (ENSBTAG00000009235) #11 ZNF639 (ENSBTAG00000037393) #12 ENSBTAG00000050978 MFN1 (ENSBTAG00000010485) #13 GNB4 (ENSBTAG00000002767) #14 ACTL6A (ENSBTAG00000002460) #15 MRPL47 (ENSBTAG00000002462) #16 NDUFB5 (ENSBTAG00000002463) #17 USP13 (ENSBTAG00000005946) #18 PEX5L (ENSBTAG00000013219) #19 TTC14 (ENSBTAG00000001968) #20 CCDC39 (ENSBTAG00000001969) #21 FXR1 (ENSBTAG00000016457) #22 DNAJC19 (ENSBTAG00000023513) ##23 ATP11B (ENSBTAG00000000290) #25 DCUN1D1 (ENSBTAG00000012797) #26 MCCC1 (ENSBTAG00000006548) #27 LAMP3 (ENSBTAG00000006552) B3GNT5 (ENSBTAG00000010397) ENSBTAG00000032217 MCF2L2 (ENSBTAG00000010394) KLHL6 (ENSBTAG00000037951) KLHL24 (ENSBTAG00000017450) ENSBTAG00000014449 YEATS2 (ENSBTAG00000014451) MAP6D1 (ENSBTAG00000014459) PARL (ENSBTAG00000014460) ENSBTAG00000052825 American bison MODERN SPECIES 3281 KCNMB2 (ENSBBBG00000016906) #8 ZMAT3 (ENSBBBG00000016883) #9 PIK3CA (ENSBBBG00000016857) #10 KCNMB3 (ENSBBBG00000016801) #11 ZNF639 (ENSBBBG00000016766) #12 MFN1 (ENSBBBG00000016746) #13 GNB4 (ENSBBBG00000000725) #14 ACTL6A (ENSBBBG00000004132) #15 MRPL47 (ENSBBBG00000016656) #16 NDUFB5 (ENSBBBG00000016629) #17 USP13 (ENSBBBG00000016615) #18 PEX5L (ENSBBBG00000016549) #19 TTC14 (ENSBBBG00000016091) #20 CCDC39 (ENSBBBG00000016047) #21 FXR1 (ENSBBBG00000016010) #22 ENSBBBG00000015808 ##23 SOX2 (ENSBBBG00000015767) #24 ATP11B (ENSBBBG00000015744) #25 DCUN1D1 (ENSBBBG00000002643) #26 MCCC1 (ENSBBBG00000015686) #27 LAMP3 (ENSBBBG00000003901) MCF2L2 (ENSBBBG00000003450) B3GNT5 (ENSBBBG00000007365) ENSBBBG00000007417 KLHL6 (ENSBBBG00000003863) KLHL24 (ENSBBBG00000003862) ENSBBBG00000015498 YEATS2 (ENSBBBG00000002697) PARL (ENSBBBG00000003851) ENSBBBG00000015445 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 139 KCNMB2 (ENSMMSG00000003557) #8 ENSMMSG00000003544 ZMAT3 (ENSMMSG00000003531) #9 PIK3CA (ENSMMSG00000003505) #10 KCNMB3 (ENSMMSG00000003476) #11 ZNF639 (ENSMMSG00000003462) #12 MFN1 (ENSMMSG00000003440) #13 GNB4 (ENSMMSG00000003419) #14 ACTL6A (ENSMMSG00000003389) #15 MRPL47 (ENSMMSG00000003361) #16 NDUFB5 (ENSMMSG00000003341) #17 USP13 (ENSMMSG00000003298) #18 PEX5L (ENSMMSG00000001803) #19 TTC14 (ENSMMSG00000001675) #20 CCDC39 (ENSMMSG00000001595) #21 ENSMMSG00000001203 #22 ENSMMSG00000001124 ##23 ENSMMSG00000001107 SOX2 (ENSMMSG00000001102) #24 ATP11B (ENSMMSG00000000997) #25 DCUN1D1 (ENSMMSG00000000928) #26 MCCC1 (ENSMMSG00000000836) #27 ENSMMSG00000000791 B3GNT5 (ENSMMSG00000000777) KLHL6 (ENSMMSG00000000728) KLHL24 (ENSMMSG00000000711) YEATS2 (ENSMMSG00000000661) MAP6D1 (ENSMMSG00000000647) PARL (ENSMMSG00000000606) ABCC5 (ENSMMSG00000000523) ENSMMSG00000000472 Siberian musk deer MODERN SPECIES 1135 ENSMMSG00000015875 ENSMMSG00000015993 RAD51C (ENSMMSG00000016025) PPM1E (ENSMMSG00000016076) ENSMMSG00000016120 ENSMMSG00000016149 TRIM37 (ENSMMSG00000016226) ENSMMSG00000016834 PRR11 (ENSMMSG00000016926) SMG8 (ENSMMSG00000016941) GDPD1 (ENSMMSG00000016972) YPEL2 (ENSMMSG00000017002) DHX40 (ENSMMSG00000017044) CLTC (ENSMMSG00000017156) ENSMMSG00000017333 ENSMMSG00000017353 #22 PTRH2 (ENSMMSG00000017362) VMP1 (ENSMMSG00000017374) TUBD1 (ENSMMSG00000017458) RPS6KB1 (ENSMMSG00000017714) RNFT1 (ENSMMSG00000017906) ENSMMSG00000017945 ENSMMSG00000018037 MED13 (ENSMMSG00000018082) INTS2 (ENSMMSG00000018213) BRIP1 (ENSMMSG00000018426) ENSMMSG00000018558 TBX4 (ENSMMSG00000018587) TBX2 (ENSMMSG00000007917) BCAS3 (ENSMMSG00000008066) PPM1D (ENSMMSG00000008295) Camelidae ANCESTRAL SPECIES ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00910000147128 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.g ##23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000154345.b ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 ENSGT00940000163497 Arabian camel MODERN SPECIES PIK3CA (ENSCDRG00005000192) #10 ENSCDRG00005000278 ENSCDRG00005000287 #11 ZNF639 (ENSCDRG00005000309) #12 MFN1 (ENSCDRG00005000323) #13 GNB4 (ENSCDRG00005000360) #14 ACTL6A (ENSCDRG00005000384) #15 ENSCDRG00005000409 MRPL47 (ENSCDRG00005000428) #16 NDUFB5 (ENSCDRG00005000451) #17 USP13 (ENSCDRG00005000482) #18 ENSCDRG00005000524 PEX5L (ENSCDRG00005000654) #19 TTC14 (ENSCDRG00005001332) #20 CCDC39 (ENSCDRG00005001364) #21 FXR1 (ENSCDRG00005001445) #22 DNAJC19 (ENSCDRG00005001633) ##23 ENSCDRG00005001671 ENSCDRG00005001685 ATP11B (ENSCDRG00005001739) #25 DCUN1D1 (ENSCDRG00005001947) #26 MCCC1 (ENSCDRG00005001977) #27 ENSCDRG00005002021 MCF2L2 (ENSCDRG00005002052) B3GNT5 (ENSCDRG00005002144) ENSCDRG00005002149 KLHL6 (ENSCDRG00005002158) KLHL24 (ENSCDRG00005002173) YEATS2 (ENSCDRG00005002196) MAP6D1 (ENSCDRG00005002239) PARL (ENSCDRG00005002270) Alpaca MODERN SPECIES 1542 TTC14 (ENSVPAG00000003378) #20 ENSVPAG00000003379 #21 FXR1 (ENSVPAG00000003384) #22 DNAJC19 (ENSVPAG00000003387) ##23 Atlantogenata ANCESTRAL SPECIES 19 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Afrotheria ANCESTRAL SPECIES 17 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Afrotheria_a ANCESTRAL SPECIES 16 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.a ##23 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00940000163715.a ENSGT00940000154345.a ENSGT00940000156789 ENSGT00530000063947.B ENSGT00390000013063 Elephant MODERN SPECIES 261 MFN1 (ENSLAFG00000008856) #13 ACTL6A (ENSLAFG00000013530) #15 MRPL47 (ENSLAFG00000018470) #16 NDUFB5 (ENSLAFG00000022619) #17 USP13 (ENSLAFG00000015504) #18 PEX5L (ENSLAFG00000015513) #19 TTC14 (ENSLAFG00000013418) #20 CCDC39 (ENSLAFG00000013426) #21 FXR1 (ENSLAFG00000001908) #22 ENSLAFG00000001910 #23 SOX2 (ENSLAFG00000006096) #24 ATP11B (ENSLAFG00000010151) #25 DCUN1D1 (ENSLAFG00000016514) #26 MCCC1 (ENSLAFG00000018018) #27 LAMP3 (ENSLAFG00000022746) B3GNT5 (ENSLAFG00000000374) ENSLAFG00000000369 ENSLAFG00000008616 KLHL24 (ENSLAFG00000008621) YEATS2 (ENSLAFG00000010347) ENSLAFG00000031362 PARL (ENSLAFG00000010360) ABCC5 (ENSLAFG00000003077) HTR3D (ENSLAFG00000003080) Hyrax MODERN SPECIES 1237 ENSPCAG00000014881 #22 DNAJC19 (ENSPCAG00000014950) ##23 Tenrec MODERN SPECIES 1571 FXR1 (ENSETEG00000006891) #22 DNAJC19 (ENSETEG00000006897) ##23 Xenarthra ANCESTRAL SPECIES 1374 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3678 TTC14 (ENSDNOG00000000730) #20 CCDC39 (ENSDNOG00000000732) #21 ENSDNOG00000019065 #22 ENSDNOG00000044604 SOX2 (ENSDNOG00000019903) #24 ENSDNOG00000049028 ENSDNOG00000048698 ENSDNOG00000038305 ATP11B (ENSDNOG00000013502) #25 Armadillo MODERN SPECIES 2908 SMIM12 (ENSDNOG00000037316) DLGAP3 (ENSDNOG00000019762) TMEM35B (ENSDNOG00000033347) ZMYM6 (ENSDNOG00000004515) ZMYM1 (ENSDNOG00000036109) SFPQ (ENSDNOG00000049454) ENSDNOG00000032775 #22 ZMYM4 (ENSDNOG00000017647) KIAA0319L (ENSDNOG00000017653) NCDN (ENSDNOG00000017658) TFAP2E (ENSDNOG00000036871) PSMB2 (ENSDNOG00000017663) C1orf216 (ENSDNOG00000017576) CLSPN (ENSDNOG00000015628) AGO4 (ENSDNOG00000015674) AGO1 (ENSDNOG00000008077) AGO3 (ENSDNOG00000008106) TEKT2 (ENSDNOG00000040733) ADPRS (ENSDNOG00000025495) COL8A2 (ENSDNOG00000043920) TRAPPC3 (ENSDNOG00000039424) MAP7D1 (ENSDNOG00000005516) Sloth MODERN SPECIES 1359 FXR1 (ENSCHOG00000012877) #22 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00940000161405.u ENSGT00940000155975 ENSGT00940000158290 ENSGT01060000248592.E ENSGT01060000248592.B Opossum MODERN SPECIES 6 KCNMB2 (ENSMODG00000021309) #8 ZMAT3 (ENSMODG00000021308) #9 PIK3CA (ENSMODG00000021305) #10 KCNMB3 (ENSMODG00000021307) #11 ZNF639 (ENSMODG00000021306) #12 MFN1 (ENSMODG00000021304) #13 GNB4 (ENSMODG00000021303) #14 ACTL6A (ENSMODG00000021302) #15 ENSMODG00000041416 #16 NDUFB5 (ENSMODG00000021300) #17 USP13 (ENSMODG00000021299) #18 ENSMODG00000029313 PEX5L (ENSMODG00000021298) #19 TTC14 (ENSMODG00000021296) #20 CCDC39 (ENSMODG00000021295) #21 FXR1 (ENSMODG00000021294) #22 ENSMODG00000021293 #23 ENSMODG00000049678 ENSMODG00000028312 ENSMODG00000041249 #25 ENSMODG00000045209 #25 ENSMODG00000021291 #25 DCUN1D1 (ENSMODG00000039145) #26 MCCC1 (ENSMODG00000021288) #27 ENSMODG00000021287 MCF2L2 (ENSMODG00000021286) B3GNT5 (ENSMODG00000024772) RFC4 (ENSMODG00000021285) EIF4A2 (ENSMODG00000021284) ENSMODG00000045791 ENSMODG00000025492 Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.j #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00940000161405.u ENSGT00940000161405.v ENSGT00940000158290 ENSGT01060000248592.E ENSGT01060000248592.B Diprotodontia ANCESTRAL SPECIES 17 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.j #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000161383.f ENSGT00390000003897.s.b.d.a ENSGT00530000063687.b.b.b.h ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00940000161405.u ENSGT00940000161405.v Diprotodontia_a ANCESTRAL SPECIES 19 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980.j #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.h.b #23 ENSGT00940000160614 #24 ENSGT00940000161383.f ENSGT00390000003897.s.b.d.a ENSGT00530000063687.b.b.b.h ENSGT00940000156162.C.k #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00940000161405.u ENSGT00940000161405.v Common wonbat MODERN SPECIES 1046 TBL1XR1 (ENSVURG00010012629) KCNMB2 (ENSVURG00010012605) #8 PIK3CA (ENSVURG00010012578) #10 KCNMB3 (ENSVURG00010012570) #11 ZNF639 (ENSVURG00010012565) #12 MFN1 (ENSVURG00010012549) #13 GNB4 (ENSVURG00010012529) #14 ACTL6A (ENSVURG00010012511) #15 MRPL47 (ENSVURG00010012499) #16 NDUFB5 (ENSVURG00010012488) #17 USP13 (ENSVURG00010012461) #18 PEX5L (ENSVURG00010012070) #19 ENSVURG00010012046 #20 ENSVURG00010012039 #20 CCDC39 (ENSVURG00010012026) #21 FXR1 (ENSVURG00010011990) #22 ENSVURG00010011974 #23 SOX2 (ENSVURG00010011967) #24 ENSVURG00010011959 ATP11B (ENSVURG00010011883) #25 DCUN1D1 (ENSVURG00010011851) #26 MCCC1 (ENSVURG00010011829) #27 ENSVURG00010011796 B3GNT5 (ENSVURG00010011785) ENSVURG00010011573 RFC4 (ENSVURG00010011519) EIF4A2 (ENSVURG00010011484) ENSVURG00010011472 ENSVURG00010011466 IGSF10 (ENSVURG00010011446) P2RY12 (ENSVURG00010011440) koala MODERN SPECIES 9 ZMAT3 (ENSPCIG00000034195) #9 ENSPCIG00000006763 PIK3CA (ENSPCIG00000006767) #10 KCNMB3 (ENSPCIG00000010392) #11 ZNF639 (ENSPCIG00000010395) #12 MFN1 (ENSPCIG00000006771) #13 GNB4 (ENSPCIG00000006774) #14 ACTL6A (ENSPCIG00000006777) #15 ENSPCIG00000006780 #16 ENSPCIG00000032372 #17 USP13 (ENSPCIG00000023996) #18 PEX5L (ENSPCIG00000024006) #19 TTC14 (ENSPCIG00000019438) #20 CCDC39 (ENSPCIG00000034234) #21 ENSPCIG00000019447 FXR1 (ENSPCIG00000026314) #22 ENSPCIG00000026316 #23 ATP11B (ENSPCIG00000013021) #25 DCUN1D1 (ENSPCIG00000013025) #26 MCCC1 (ENSPCIG00000013027) #27 ENSPCIG00000013028 ENSPCIG00000013031 B3GNT5 (ENSPCIG00000013050) RFC4 (ENSPCIG00000013051) EIF4A2 (ENSPCIG00000013057) ENSPCIG00000013070 ENSPCIG00000013092 IGSF10 (ENSPCIG00000013094) MED12L (ENSPCIG00000013099) P2RY12 (ENSPCIG00000013161) P2RY13 (ENSPCIG00000013162) Wallaby MODERN SPECIES 2330 FXR1 (ENSMEUG00000004706) #22 Tasmanian devil MODERN SPECIES 2 TBL1XR1 (ENSSHAG00000005700) KCNMB2 (ENSSHAG00000027317) #8 ZMAT3 (ENSSHAG00000016154) #9 PIK3CA (ENSSHAG00000016406) #10 KCNMB3 (ENSSHAG00000016520) #11 ZNF639 (ENSSHAG00000016769) #12 MFN1 (ENSSHAG00000016834) #13 GNB4 (ENSSHAG00000016950) #14 ACTL6A (ENSSHAG00000017237) #15 MRPL47 (ENSSHAG00000017273) #16 NDUFB5 (ENSSHAG00000021190) #17 USP13 (ENSSHAG00000017431) #18 PEX5L (ENSSHAG00000017604) #19 TTC14 (ENSSHAG00000018408) #20 CCDC39 (ENSSHAG00000018433) #21 FXR1 (ENSSHAG00000018625) #22 ENSSHAG00000018671 #23 SOX2 (ENSSHAG00000020580) #24 ATP11B (ENSSHAG00000015543) #25 DCUN1D1 (ENSSHAG00000015925) #26 MCCC1 (ENSSHAG00000016104) #27 ENSSHAG00000016243 ENSSHAG00000016433 ENSSHAG00000031434 ENSSHAG00000017071 ENSSHAG00000017081 ENSSHAG00000023713 ENSSHAG00000017283 IGSF10 (ENSSHAG00000017493) ENSSHAG00000017538 P2RY12 (ENSSHAG00000022919) Platypus MODERN SPECIES ENSOANG00000001673 KCNMB2 (ENSOANG00000040015) #8 ZMAT3 (ENSOANG00000009901) #9 PIK3CA (ENSOANG00000013922) #10 KCNMB3 (ENSOANG00000013923) #11 ZNF639 (ENSOANG00000012679) #12 MFN1 (ENSOANG00000004694) #13 GNB4 (ENSOANG00000004695) #14 ACTL6A (ENSOANG00000044256) #15 MRPL47 (ENSOANG00000002137) #16 ENSOANG00000021730 #17 USP13 (ENSOANG00000050467) #18 PEX5L (ENSOANG00000041655) #19 TTC14 (ENSOANG00000003676) #20 CCDC39 (ENSOANG00000020027) #21 FXR1 (ENSOANG00000011045) #22 DNAJC19 (ENSOANG00000011044) #23 ENSOANG00000011256 ##25 ENSOANG00000045472 ##25 DCUN1D1 (ENSOANG00000011254) #26 MCCC1 (ENSOANG00000011253) #27 ENSOANG00000011252 ENSOANG00000050093 B3GNT5 (ENSOANG00000009184) RFC4 (ENSOANG00000048018) EIF4A2 (ENSOANG00000042142) ENSOANG00000043705 ENSOANG00000042947 ENSOANG00000036092 AHSG (ENSOANG00000046335) FARSB (ENSOANG00000015387) Sauria ANCESTRAL SPECIES 9 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Lepidosauria ANCESTRAL SPECIES 12 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Episquamata ANCESTRAL SPECIES 2 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000011515 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Toxicofera ANCESTRAL SPECIES 2 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000011515 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT01030000237363 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B.m ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Elapidae ANCESTRAL SPECIES 4 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000011515 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT01030000237363 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B.m ENSGT00950000182930.B.n ENSGT00950000182930.A.b.i.a Indian cobra MODERN SPECIES 3 ENSNNAG00000007631 ZMAT3 (ENSNNAG00000007645) #9 PIK3CA (ENSNNAG00000007680) #10 ZNF639 (ENSNNAG00000007836) #12 MFN1 (ENSNNAG00000007861) #13 GNB4 (ENSNNAG00000007920) #14 NIFK (ENSNNAG00000007941) ACTL6A (ENSNNAG00000007971) #15 MRPL47 (ENSNNAG00000008025) #16 NDUFB5 (ENSNNAG00000008239) #17 USP13 (ENSNNAG00000008293) #18 PEX5L (ENSNNAG00000008347) #19 TTC14 (ENSNNAG00000008565) #20 ENSNNAG00000008598 CCDC39 (ENSNNAG00000008649) #21 FXR1 (ENSNNAG00000008767) #22 DNAJC19 (ENSNNAG00000010510) #23 SOX2 (ENSNNAG00000010554) #24 ATP11B (ENSNNAG00000010604) #25 DCUN1D1 (ENSNNAG00000011093) #26 MCCC1 (ENSNNAG00000011141) #27 ENSNNAG00000011193 MCF2L2 (ENSNNAG00000011227) B3GNT5 (ENSNNAG00000011392) ENSNNAG00000011403 RFC4 (ENSNNAG00000011428) EIF4A2 (ENSNNAG00000011460) KNG1 (ENSNNAG00000011576) ENSNNAG00000011641 ENSNNAG00000011657 ENSNNAG00000011677 Elapidae_a ANCESTRAL SPECIES ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000011515 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT01030000237363 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B.m Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000011515 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT01030000237363 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B.m Eastern brown snake MODERN SPECIES 29 KCNMB2 (ENSPTXG00000017809) #8 ZMAT3 (ENSPTXG00000017808) #9 PIK3CA (ENSPTXG00000017806) #10 ZNF639 (ENSPTXG00000017805) #12 MFN1 (ENSPTXG00000017761) #13 GNB4 (ENSPTXG00000017756) #14 NIFK (ENSPTXG00000017754) ACTL6A (ENSPTXG00000017752) #15 MRPL47 (ENSPTXG00000017751) #16 NDUFB5 (ENSPTXG00000017750) #17 USP13 (ENSPTXG00000017659) #18 PEX5L (ENSPTXG00000017655) #19 TTC14 (ENSPTXG00000017654) #20 ENSPTXG00000017653 ENSPTXG00000017651 #21 FXR1 (ENSPTXG00000017650) #22 DNAJC19 (ENSPTXG00000017649) #23 SOX2 (ENSPTXG00000017648) #24 ENSPTXG00000017647 ATP11B (ENSPTXG00000017645) #25 DCUN1D1 (ENSPTXG00000017644) #26 MCCC1 (ENSPTXG00000017643) #27 LAMP3 (ENSPTXG00000017642) B3GNT5 (ENSPTXG00000017641) MCF2L2 (ENSPTXG00000017640) ENSPTXG00000017639 ENSPTXG00000017637 RFC4 (ENSPTXG00000017636) EIF4A2 (ENSPTXG00000017631) ENSPTXG00000017630 Mainland tiger snake MODERN SPECIES ENSNSUG00000003919 ZMAT3 (ENSNSUG00000003923) #9 PIK3CA (ENSNSUG00000003932) #10 ENSNSUG00000004425 ZNF639 (ENSNSUG00000004427) #12 MFN1 (ENSNSUG00000004432) #13 GNB4 (ENSNSUG00000004440) #14 NIFK (ENSNSUG00000004538) ACTL6A (ENSNSUG00000004551) #15 MRPL47 (ENSNSUG00000004553) #16 NDUFB5 (ENSNSUG00000004556) #17 USP13 (ENSNSUG00000004559) #18 PEX5L (ENSNSUG00000004565) #19 TTC14 (ENSNSUG00000004573) #20 CCDC39 (ENSNSUG00000004589) #21 FXR1 (ENSNSUG00000004596) #22 DNAJC19 (ENSNSUG00000004600) #23 SOX2 (ENSNSUG00000004653) #24 Blue-lipped sea krait MODERN SPECIES 157 FXR1 (ENSLLTG00000004144) #22 DNAJC19 (ENSLLTG00000003835) #23 Lizard MODERN SPECIES 2 PIK3CA (ENSACAG00000004872) #10 ZNF639 (ENSACAG00000044413) #12 MFN1 (ENSACAG00000004702) #13 GNB4 (ENSACAG00000004667) #14 ENSACAG00000004655 ENSACAG00000044517 ACTL6A (ENSACAG00000004548) #15 MRPL47 (ENSACAG00000043862) #16 NDUFB5 (ENSACAG00000004465) #17 USP13 (ENSACAG00000004318) #18 PEX5L (ENSACAG00000004210) #19 TTC14 (ENSACAG00000004108) #20 ENSACAG00000044880 ENSACAG00000040084 CCDC39 (ENSACAG00000004063) #21 FXR1 (ENSACAG00000003918) #22 DNAJC19 (ENSACAG00000003917) #23 ENSACAG00000042518 ENSACAG00000040070 ENSACAG00000038324 ATP11B (ENSACAG00000007250) #25 DCUN1D1 (ENSACAG00000007413) #26 MCCC1 (ENSACAG00000007450) #27 ENSACAG00000007500 ENSACAG00000029191 B3GNT5 (ENSACAG00000007633) MCF2L2 (ENSACAG00000007515) Laterata ANCESTRAL SPECIES ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00390000011515 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 ENSGT00940000158024.C Common wall lizard MODERN SPECIES 13 ENSPMRG00000003204 ZNF639 (ENSPMRG00000003214) #12 MFN1 (ENSPMRG00000003386) #13 GNB4 (ENSPMRG00000003918) #14 ENSPMRG00000003923 NIFK (ENSPMRG00000003928) ACTL6A (ENSPMRG00000003934) #15 ENSPMRG00000003959 #16 ENSPMRG00000003984 #16 NDUFB5 (ENSPMRG00000003995) #17 ENSPMRG00000004003 USP13 (ENSPMRG00000004010) #18 PEX5L (ENSPMRG00000004041) #19 ENSPMRG00000004145 CCDC39 (ENSPMRG00000004156) #21 FXR1 (ENSPMRG00000004189) #22 ENSPMRG00000004207 DNAJC19 (ENSPMRG00000004217) #23 ENSPMRG00000004232 ENSPMRG00000004270 #25 ENSPMRG00000004385 #25 DCUN1D1 (ENSPMRG00000004392) #26 MCCC1 (ENSPMRG00000004403) #27 ENSPMRG00000004426 ENSPMRG00000004431 MCF2L2 (ENSPMRG00000004546) B3GNT5 (ENSPMRG00000005015) RFC4 (ENSPMRG00000005025) EIF4A2 (ENSPMRG00000005043) KNG1 (ENSPMRG00000005067) ENSPMRG00000005082 Argentine black and white tegu MODERN SPECIES 21 ENSSMRG00000023621 ZNF639 (ENSSMRG00000023620) #12 MFN1 (ENSSMRG00000023619) #13 ENSSMRG00000023618 ##14 ENSSMRG00000023617 #14 NIFK (ENSSMRG00000023616) ACTL6A (ENSSMRG00000023614) #15 MRPL47 (ENSSMRG00000023613) #16 NDUFB5 (ENSSMRG00000023612) #17 USP13 (ENSSMRG00000023611) #18 PEX5L (ENSSMRG00000023610) #19 ENSSMRG00000023609 TTC14 (ENSSMRG00000023608) #20 ENSSMRG00000023607 CCDC39 (ENSSMRG00000023606) #21 FXR1 (ENSSMRG00000023605) #22 DNAJC19 (ENSSMRG00000023604) #23 ENSSMRG00000023601 ATP11B (ENSSMRG00000023598) #25 DCUN1D1 (ENSSMRG00000023597) #26 MCCC1 (ENSSMRG00000023596) #27 ENSSMRG00000023595 B3GNT5 (ENSSMRG00000023593) MCF2L2 (ENSSMRG00000023592) RFC4 (ENSSMRG00000023591) EIF4A2 (ENSSMRG00000023586) KNG1 (ENSSMRG00000023585) ENSSMRG00000023583 FETUB (ENSSMRG00000023582) AHSG (ENSSMRG00000023581) ENSSMRG00000023580 tuatara MODERN SPECIES 1534 TBL1XR1 (ENSSPUG00000014823) KCNMB2 (ENSSPUG00000014799) #8 ZMAT3 (ENSSPUG00000014753) #9 PIK3CA (ENSSPUG00000014720) #10 ZNF639 (ENSSPUG00000014710) #12 MFN1 (ENSSPUG00000014691) #13 GNB4 (ENSSPUG00000014672) #14 ACTL6A (ENSSPUG00000014641) #15 MRPL47 (ENSSPUG00000014635) #16 NDUFB5 (ENSSPUG00000014622) #17 USP13 (ENSSPUG00000014601) #18 PEX5L (ENSSPUG00000014580) #19 ENSSPUG00000014567 #20 ENSSPUG00000014559 #20 CCDC39 (ENSSPUG00000014545) #21 FXR1 (ENSSPUG00000014501) #22 DNAJC19 (ENSSPUG00000014476) #23 ENSSPUG00000014466 SOX2 (ENSSPUG00000014432) #24 ENSSPUG00000014421 #25 ENSSPUG00000014405 #25 ENSSPUG00000014393 #25 DCUN1D1 (ENSSPUG00000014386) #26 MCCC1 (ENSSPUG00000014366) #27 ENSSPUG00000014354 MCF2L2 (ENSSPUG00000014254) RFC4 (ENSSPUG00000014211) EIF4A2 (ENSSPUG00000014154) AHSG (ENSSPUG00000014094) SENP5 (ENSSPUG00000014067) EPHB3 (ENSSPUG00000014042) Archelosauria ANCESTRAL SPECIES 11 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369.a ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Archosauria ANCESTRAL SPECIES 10 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00960000190572 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Aves ANCESTRAL SPECIES 13 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Neognathae ANCESTRAL SPECIES 9 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Galloanserae ANCESTRAL SPECIES 16 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Anatidae ANCESTRAL SPECIES 31 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 ENSGT00940000158024.C ENSGT00390000018195 Pink-footed goose MODERN SPECIES 191 ENSABRG00000004575 #21 FXR1 (ENSABRG00000004611) #22 DNAJC19 (ENSABRG00000004667) #23 ENSABRG00000004678 ATP11B (ENSABRG00000004951) #25 DCUN1D1 (ENSABRG00000008477) #26 MCCC1 (ENSABRG00000008569) #27 ENSABRG00000009263 MCF2L2 (ENSABRG00000009315) B3GNT5 (ENSABRG00000009423) ENSABRG00000009427 RFC4 (ENSABRG00000009440) EIF4A2 (ENSABRG00000009508) KNG1 (ENSABRG00000010063) FETUB (ENSABRG00000010071) AHSG (ENSABRG00000010086) SENP5 (ENSABRG00000010116) Duck MODERN SPECIES 27 NLGN1 (ENSAPLG00000010082) NAALADL2 (ENSAPLG00000010077) TBL1XR1 (ENSAPLG00000013445) KCNMB2 (ENSAPLG00000020595) #8 ZMAT3 (ENSAPLG00000013292) #9 PIK3CA (ENSAPLG00000012924) #10 ZNF639 (ENSAPLG00000012914) #12 MFN1 (ENSAPLG00000012500) #13 GNB4 (ENSAPLG00000012235) #14 ACTL6A (ENSAPLG00000011809) #15 MRPL47 (ENSAPLG00000011793) #16 USP13 (ENSAPLG00000011239) #18 PEX5L (ENSAPLG00000011193) #19 TTC14 (ENSAPLG00000010921) #20 CCDC39 (ENSAPLG00000010760) #21 FXR1 (ENSAPLG00000010032) #22 DNAJC19 (ENSAPLG00000009956) #23 ATP11B (ENSAPLG00000009719) #25 DCUN1D1 (ENSAPLG00000009496) #26 MCCC1 (ENSAPLG00000008989) #27 ENSAPLG00000021030 B3GNT5 (ENSAPLG00000000814) MCF2L2 (ENSAPLG00000007943) RFC4 (ENSAPLG00000007380) EIF4A2 (ENSAPLG00000006751) KNG1 (ENSAPLG00000006515) FETUB (ENSAPLG00000006369) AHSG (ENSAPLG00000006249) SENP5 (ENSAPLG00000005903) EPHB3 (ENSAPLG00000009704) ENSAPLG00000025180 Phasianidae ANCESTRAL SPECIES 9 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.e #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Japanese quail MODERN SPECIES 27 NAALADL2 (ENSCJPG00005014265) TBL1XR1 (ENSCJPG00005014262) KCNMB2 (ENSCJPG00005014256) #8 ZMAT3 (ENSCJPG00005014255) #9 PIK3CA (ENSCJPG00005014254) #10 ZNF639 (ENSCJPG00005014253) #12 MFN1 (ENSCJPG00005014252) #13 GNB4 (ENSCJPG00005014251) #14 ACTL6A (ENSCJPG00005014250) #15 MRPL47 (ENSCJPG00005014249) #16 NDUFB5 (ENSCJPG00005014248) #17 USP13 (ENSCJPG00005014247) #18 PEX5L (ENSCJPG00005014246) #19 TTC14 (ENSCJPG00005014245) #20 CCDC39 (ENSCJPG00005014244) #21 FXR1 (ENSCJPG00005014242) #22 DNAJC19 (ENSCJPG00005014236) #23 SOX2 (ENSCJPG00005014232) #24 ATP11B (ENSCJPG00005014227) #25 DCUN1D1 (ENSCJPG00005014226) #26 MCCC1 (ENSCJPG00005014225) #27 ENSCJPG00005014224 B3GNT5 (ENSCJPG00005014223) MCF2L2 (ENSCJPG00005013794) ENSCJPG00005013793 RFC4 (ENSCJPG00005013792) EIF4A2 (ENSCJPG00005013788) KNG1 (ENSCJPG00005013787) ENSCJPG00005013786 FETUB (ENSCJPG00005013785) AHSG (ENSCJPG00005013784) Phasianidae_b ANCESTRAL SPECIES 12 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384.e #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00990000203899 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Chicken MODERN SPECIES 38 NAALADL2 (ENSGALG00010018465) TBL1XR1 (ENSGALG00010018396) KCNMB2 (ENSGALG00010018349) #8 ZMAT3 (ENSGALG00010018317) #9 PIK3CA (ENSGALG00010018296) #10 ZNF639 (ENSGALG00010018275) #12 MFN1 (ENSGALG00010018255) #13 GNB4 (ENSGALG00010018185) #14 ACTL6A (ENSGALG00010018172) #15 MRPL47 (ENSGALG00010018143) #16 NDUFB5 (ENSGALG00010018137) #17 USP13 (ENSGALG00010018123) #18 PEX5L (ENSGALG00010018055) #19 TTC14 (ENSGALG00010018039) #20 CCDC39 (ENSGALG00010018026) #21 FXR1 (ENSGALG00010016652) #22 DNAJC19 (ENSGALG00010016614) #23 SOX2 (ENSGALG00010016609) #24 ATP11B (ENSGALG00010016588) #25 DCUN1D1 (ENSGALG00010016529) #26 MCCC1 (ENSGALG00010016475) #27 LAMP3 (ENSGALG00010016456) B3GNT5 (ENSGALG00010016431) MCF2L2 (ENSGALG00010016355) RFC4 (ENSGALG00010016270) EIF4A2 (ENSGALG00010016240) KNG1 (ENSGALG00010016206) ENSGALG00010016177 FETUB (ENSGALG00010016119) AHSG (ENSGALG00010016067) ENSGALG00010016041 Turkey MODERN SPECIES 2 TBL1XR1 (ENSMGAG00000009892) ENSMGAG00000021926 KCNMB2 (ENSMGAG00000009882) #8 ZMAT3 (ENSMGAG00000009873) #9 PIK3CA (ENSMGAG00000009828) #10 ZNF639 (ENSMGAG00000009823) #12 MFN1 (ENSMGAG00000009801) #13 GNB4 (ENSMGAG00000002359) #14 ACTL6A (ENSMGAG00000009756) #15 NDUFB5 (ENSMGAG00000009730) #17 MRPL47 (ENSMGAG00000020958) #16 USP13 (ENSMGAG00000009725) #18 PEX5L (ENSMGAG00000009710) #19 TTC14 (ENSMGAG00000009680) #20 CCDC39 (ENSMGAG00000009659) #21 FXR1 (ENSMGAG00000009602) #22 ENSMGAG00000021069 #23 ATP11B (ENSMGAG00000009540) #25 DCUN1D1 (ENSMGAG00000009535) #26 MCCC1 (ENSMGAG00000009494) #27 ENSMGAG00000009487 B3GNT5 (ENSMGAG00000016047) ENSMGAG00000020114 MCF2L2 (ENSMGAG00000009434) RFC4 (ENSMGAG00000009412) EIF4A2 (ENSMGAG00000009383) ENSMGAG00000019935 ENSMGAG00000023000 FETUB (ENSMGAG00000009336) AHSG (ENSMGAG00000009326) ENSMGAG00000009313 Neognathae_b ANCESTRAL SPECIES 11 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Passeriformes ANCESTRAL SPECIES 9 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Great tit MODERN SPECIES 29 NAALADL2 (ENSPMJG00000002940) TBL1XR1 (ENSPMJG00000002841) KCNMB2 (ENSPMJG00000002756) #8 ZMAT3 (ENSPMJG00000002709) #9 PIK3CA (ENSPMJG00000002701) #10 ZNF639 (ENSPMJG00000002695) #12 MFN1 (ENSPMJG00000002684) #13 GNB4 (ENSPMJG00000002659) #14 ACTL6A (ENSPMJG00000002638) #15 MRPL47 (ENSPMJG00000002630) #16 NDUFB5 (ENSPMJG00000002618) #17 USP13 (ENSPMJG00000002592) #18 PEX5L (ENSPMJG00000002525) #19 TTC14 (ENSPMJG00000002481) #20 CCDC39 (ENSPMJG00000002417) #21 FXR1 (ENSPMJG00000002237) #22 DNAJC19 (ENSPMJG00000002207) #23 ATP11B (ENSPMJG00000001957) #25 DCUN1D1 (ENSPMJG00000001941) #26 MCCC1 (ENSPMJG00000001932) #27 ENSPMJG00000001928 B3GNT5 (ENSPMJG00000001924) MCF2L2 (ENSPMJG00000001772) RFC4 (ENSPMJG00000001751) EIF4A2 (ENSPMJG00000001736) ENSPMJG00000001721 FETUB (ENSPMJG00000001716) AHSG (ENSPMJG00000001712) SENP5 (ENSPMJG00000001704) EPHB3 (ENSPMJG00000001682) POLR2H (ENSPMJG00000001681) Passeriformes_d ANCESTRAL SPECIES 10 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Passeriformes_g ANCESTRAL SPECIES 11 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Medium ground finch MODERN SPECIES 12 NAALADL2 (ENSGFOG00000007762) TBL1XR1 (ENSGFOG00000007746) KCNMB2 (ENSGFOG00000007709) #8 ZMAT3 (ENSGFOG00000007697) #9 PIK3CA (ENSGFOG00000007668) #10 ZNF639 (ENSGFOG00000007659) #12 MFN1 (ENSGFOG00000007632) #13 GNB4 (ENSGFOG00000007624) #14 ACTL6A (ENSGFOG00000007543) #15 MRPL47 (ENSGFOG00000007503) #16 NDUFB5 (ENSGFOG00000007487) #17 USP13 (ENSGFOG00000007465) #18 PEX5L (ENSGFOG00000007428) #19 ENSGFOG00000007366 CCDC39 (ENSGFOG00000007337) #21 FXR1 (ENSGFOG00000005246) #22 DNAJC19 (ENSGFOG00000005157) #23 SOX2 (ENSGFOG00000005149) #24 ENSGFOG00000005136 ATP11B (ENSGFOG00000005085) #25 DCUN1D1 (ENSGFOG00000005071) #26 MCCC1 (ENSGFOG00000005054) #27 ENSGFOG00000005046 B3GNT5 (ENSGFOG00000005034) ENSGFOG00000005025 MCF2L2 (ENSGFOG00000003022) RFC4 (ENSGFOG00000002865) EIF4A2 (ENSGFOG00000002798) ENSGFOG00000002611 ENSGFOG00000013773 AHSG (ENSGFOG00000013759) Passeroidea ANCESTRAL SPECIES 13 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 ENSGT00940000158024.C Zebra finch MODERN SPECIES 31 NAALADL2 (ENSTGUG00000010781) TBL1XR1 (ENSTGUG00000010773) KCNMB2 (ENSTGUG00000026184) #8 ZMAT3 (ENSTGUG00000027964) #9 PIK3CA (ENSTGUG00000010736) #10 ZNF639 (ENSTGUG00000027191) #12 MFN1 (ENSTGUG00000010693) #13 GNB4 (ENSTGUG00000021021) #14 ACTL6A (ENSTGUG00000010657) #15 MRPL47 (ENSTGUG00000010649) #16 NDUFB5 (ENSTGUG00000010639) #17 USP13 (ENSTGUG00000010622) #18 PEX5L (ENSTGUG00000010602) #19 TTC14 (ENSTGUG00000010592) #20 CCDC39 (ENSTGUG00000010586) #21 FXR1 (ENSTGUG00000010560) #22 DNAJC19 (ENSTGUG00000010557) #23 ENSTGUG00000019041 ATP11B (ENSTGUG00000010523) #25 DCUN1D1 (ENSTGUG00000010517) #26 MCCC1 (ENSTGUG00000010506) #27 ENSTGUG00000024117 B3GNT5 (ENSTGUG00000021356) MCF2L2 (ENSTGUG00000010484) RFC4 (ENSTGUG00000010469) EIF4A2 (ENSTGUG00000010452) ENSTGUG00000010451 ENSTGUG00000010450 FETUB (ENSTGUG00000010441) AHSG (ENSTGUG00000010437) SENP5 (ENSTGUG00000010432) Common canary MODERN SPECIES 10 NAALADL2 (ENSSCAG00000012244) TBL1XR1 (ENSSCAG00000012275) KCNMB2 (ENSSCAG00000012297) #8 ZMAT3 (ENSSCAG00000012302) #9 PIK3CA (ENSSCAG00000012311) #10 ZNF639 (ENSSCAG00000012318) #12 MFN1 (ENSSCAG00000012323) #13 GNB4 (ENSSCAG00000012330) #14 ACTL6A (ENSSCAG00000012338) #15 MRPL47 (ENSSCAG00000012343) #16 NDUFB5 (ENSSCAG00000012346) #17 USP13 (ENSSCAG00000012352) #18 PEX5L (ENSSCAG00000012363) #19 TTC14 (ENSSCAG00000012380) #20 CCDC39 (ENSSCAG00000012392) #21 FXR1 (ENSSCAG00000012440) #22 DNAJC19 (ENSSCAG00000012624) #23 ATP11B (ENSSCAG00000012637) #25 DCUN1D1 (ENSSCAG00000012652) #26 MCCC1 (ENSSCAG00000012658) #27 ENSSCAG00000012659 MCF2L2 (ENSSCAG00000012810) B3GNT5 (ENSSCAG00000013681) RFC4 (ENSSCAG00000013683) EIF4A2 (ENSSCAG00000013691) KNG1 (ENSSCAG00000013700) HRG (ENSSCAG00000013707) FETUB (ENSSCAG00000013711) AHSG (ENSSCAG00000013717) SENP5 (ENSSCAG00000013725) EPHB3 (ENSSCAG00000013746) Flycatcher MODERN SPECIES 28 NAALADL2 (ENSFALG00000008425) TBL1XR1 (ENSFALG00000008416) KCNMB2 (ENSFALG00000008411) #8 ZMAT3 (ENSFALG00000008403) #9 PIK3CA (ENSFALG00000008395) #10 ZNF639 (ENSFALG00000027836) #12 MFN1 (ENSFALG00000008386) #13 GNB4 (ENSFALG00000008376) #14 ACTL6A (ENSFALG00000008369) #15 MRPL47 (ENSFALG00000008365) #16 NDUFB5 (ENSFALG00000025849) #17 USP13 (ENSFALG00000008348) #18 PEX5L (ENSFALG00000008333) #19 TTC14 (ENSFALG00000008319) #20 CCDC39 (ENSFALG00000008311) #21 FXR1 (ENSFALG00000008301) #22 DNAJC19 (ENSFALG00000008296) #23 SOX2 (ENSFALG00000014383) #24 ATP11B (ENSFALG00000008284) #25 MCCC1 (ENSFALG00000008252) #27 ENSFALG00000027817 ENSFALG00000024579 B3GNT5 (ENSFALG00000015298) ENSFALG00000023180 ENSFALG00000024403 ENSFALG00000023627 MCF2L2 (ENSFALG00000008239) RFC4 (ENSFALG00000008236) EIF4A2 (ENSFALG00000008230) KNG1 (ENSFALG00000008226) HRG (ENSFALG00000024279) Neognathae_c ANCESTRAL SPECIES 13 ENSGT01030000234598.a.b ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Kakapo MODERN SPECIES 25 NAALADL2 (ENSSHBG00005017848) TBL1XR1 (ENSSHBG00005017856) KCNMB2 (ENSSHBG00005017869) #8 ZMAT3 (ENSSHBG00005017878) #9 PIK3CA (ENSSHBG00005000694) #10 ZNF639 (ENSSHBG00005000719) #12 MFN1 (ENSSHBG00005010431) #13 GNB4 (ENSSHBG00005010477) #14 ACTL6A (ENSSHBG00005010515) #15 MRPL47 (ENSSHBG00005010546) #16 NDUFB5 (ENSSHBG00005010573) #17 USP13 (ENSSHBG00005010631) #18 PEX5L (ENSSHBG00005010862) #19 TTC14 (ENSSHBG00005012064) #20 CCDC39 (ENSSHBG00005012103) #21 FXR1 (ENSSHBG00005012156) #22 DNAJC19 (ENSSHBG00005012189) #23 ATP11B (ENSSHBG00005012327) #25 DCUN1D1 (ENSSHBG00005012436) #26 MCCC1 (ENSSHBG00005012474) #27 ENSSHBG00005012503 MCF2L2 (ENSSHBG00005012853) B3GNT5 (ENSSHBG00005015288) ENSSHBG00005015293 RFC4 (ENSSHBG00005015302) EIF4A2 (ENSSHBG00005015314) SENP5 (ENSSHBG00005015354) KNG1 (ENSSHBG00005015609) ENSSHBG00005015640 ENSSHBG00005015648 AHSG (ENSSHBG00005015656) Golden eagle MODERN SPECIES 1 TBL1XR1 (ENSACCG00020004568) KCNMB2 (ENSACCG00020004589) #8 ENSACCG00020004603 ZMAT3 (ENSACCG00020004611) #9 PIK3CA (ENSACCG00020004627) #10 ZNF639 (ENSACCG00020004651) #12 MFN1 (ENSACCG00020004658) #13 GNB4 (ENSACCG00020004669) #14 ACTL6A (ENSACCG00020004677) #15 MRPL47 (ENSACCG00020004710) #16 NDUFB5 (ENSACCG00020000356) #17 USP13 (ENSACCG00020000413) #18 PEX5L (ENSACCG00020000831) #19 TTC14 (ENSACCG00020000953) #20 CCDC39 (ENSACCG00020000987) #21 FXR1 (ENSACCG00020001041) #22 DNAJC19 (ENSACCG00020001068) #23 ATP11B (ENSACCG00020001153) #25 DCUN1D1 (ENSACCG00020001287) #26 MCCC1 (ENSACCG00020001312) #27 ENSACCG00020001340 MCF2L2 (ENSACCG00020001422) B3GNT5 (ENSACCG00020001574) RFC4 (ENSACCG00020001586) EIF4A2 (ENSACCG00020001610) KNG1 (ENSACCG00020001659) FETUB (ENSACCG00020001703) AHSG (ENSACCG00020001717) ENSACCG00020001753 EPHB3 (ENSACCG00020001771) POLR2H (ENSACCG00020001778) African ostrich MODERN SPECIES 931 ZMAT3 (ENSSCUG00000017337) #9 PIK3CA (ENSSCUG00000017341) #10 MFN1 (ENSSCUG00000017346) #13 GNB4 (ENSSCUG00000017351) #14 ACTL6A (ENSSCUG00000017355) #15 MRPL47 (ENSSCUG00000017373) #16 NDUFB5 (ENSSCUG00000017374) #17 USP13 (ENSSCUG00000017376) #18 PEX5L (ENSSCUG00000017378) #19 TTC14 (ENSSCUG00000017384) #20 CCDC39 (ENSSCUG00000017389) #21 ENSSCUG00000017390 FXR1 (ENSSCUG00000017419) #22 ENSSCUG00000017441 DNAJC19 (ENSSCUG00000017443) #23 ATP11B (ENSSCUG00000017450) #25 Australian saltwater crocodile MODERN SPECIES 30 KCNMB2 (ENSCPRG00005009647) #8 ZMAT3 (ENSCPRG00005009651) #9 ENSCPRG00005009658 #10 ZNF639 (ENSCPRG00005009780) #12 MFN1 (ENSCPRG00005009802) #13 GNB4 (ENSCPRG00005009816) #14 ACTL6A (ENSCPRG00005010054) #15 MRPL47 (ENSCPRG00005010062) #16 NDUFB5 (ENSCPRG00005010066) #17 USP13 (ENSCPRG00005010083) #18 PEX5L (ENSCPRG00005010104) #19 TTC14 (ENSCPRG00005010137) #20 ENSCPRG00005010293 CCDC39 (ENSCPRG00005010308) #21 DNAJC19 (ENSCPRG00005010343) #23 FXR1 (ENSCPRG00005010361) #22 SOX2 (ENSCPRG00005010584) #24 ENSCPRG00005010594 ATP11B (ENSCPRG00005010622) #25 DCUN1D1 (ENSCPRG00005010672) #26 MCCC1 (ENSCPRG00005010677) #27 LAMP3 (ENSCPRG00005010688) MCF2L2 (ENSCPRG00005010698) B3GNT5 (ENSCPRG00005010707) ENSCPRG00005010709 RFC4 (ENSCPRG00005010711) EIF4A2 (ENSCPRG00005010713) KNG1 (ENSCPRG00005010726) ENSCPRG00005010729 ENSCPRG00005010732 ENSCPRG00005010738 Cryptodira ANCESTRAL SPECIES 16 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369.a ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000164015 ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b Testudinoidea ANCESTRAL SPECIES 9 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369.a ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701.n #20 ENSGT00390000013701.m #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Emydidae ANCESTRAL SPECIES 3 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369.a ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701.n #20 ENSGT00390000013701.m #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C ENSGT00940000159865 Three-toed box turtle MODERN SPECIES 32 TBL1XR1 (ENSTMTG00000009406) KCNMB2 (ENSTMTG00000009434) #8 ZMAT3 (ENSTMTG00000009458) #9 PIK3CA (ENSTMTG00000009470) #10 ENSTMTG00000009517 ZNF639 (ENSTMTG00000009549) #12 MFN1 (ENSTMTG00000009563) #13 GNB4 (ENSTMTG00000009587) #14 ACTL6A (ENSTMTG00000009615) #15 MRPL47 (ENSTMTG00000009647) #16 NDUFB5 (ENSTMTG00000009666) #17 USP13 (ENSTMTG00000009685) #18 PEX5L (ENSTMTG00000009761) #19 TTC14 (ENSTMTG00000009812) #20 CCDC39 (ENSTMTG00000009881) #21 FXR1 (ENSTMTG00000010020) #22 DNAJC19 (ENSTMTG00000010071) #23 SOX2 (ENSTMTG00000010093) #24 ATP11B (ENSTMTG00000010113) #25 DCUN1D1 (ENSTMTG00000010264) #26 MCCC1 (ENSTMTG00000010280) #27 ENSTMTG00000010301 MCF2L2 (ENSTMTG00000010345) B3GNT5 (ENSTMTG00000010481) RFC4 (ENSTMTG00000010487) EIF4A2 (ENSTMTG00000010512) KNG1 (ENSTMTG00000010596) ENSTMTG00000010628 ENSTMTG00000010651 AHSG (ENSTMTG00000010663) SENP5 (ENSTMTG00000010689) painted turtle MODERN SPECIES 748 KCNMB2 (ENSCPBG00000026916) #8 ZMAT3 (ENSCPBG00000026917) #9 PIK3CA (ENSCPBG00000026921) #10 ENSCPBG00000026924 ZNF639 (ENSCPBG00000026927) #12 MFN1 (ENSCPBG00000026929) #13 GNB4 (ENSCPBG00000026930) #14 ACTL6A (ENSCPBG00000026932) #15 MRPL47 (ENSCPBG00000026934) #16 NDUFB5 (ENSCPBG00000026935) #17 USP13 (ENSCPBG00000026936) #18 PEX5L (ENSCPBG00000026944) #19 ENSCPBG00000026954 #20 ENSCPBG00000026955 #20 CCDC39 (ENSCPBG00000000173) #21 FXR1 (ENSCPBG00000000223) #22 DNAJC19 (ENSCPBG00000000285) #23 ATP11B (ENSCPBG00000000373) #25 DCUN1D1 (ENSCPBG00000000501) #26 MCCC1 (ENSCPBG00000000534) #27 LAMP3 (ENSCPBG00000000571) MCF2L2 (ENSCPBG00000000648) B3GNT5 (ENSCPBG00000000887) RFC4 (ENSCPBG00000000925) EIF4A2 (ENSCPBG00000000975) KNG1 (ENSCPBG00000001093) ENSCPBG00000001270 ENSCPBG00000001293 AHSG (ENSCPBG00000001309) SENP5 (ENSCPBG00000001347) EPHB3 (ENSCPBG00000001395) Testudinidae ANCESTRAL SPECIES 7 ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT01030000235369.a ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701.n #20 ENSGT00390000013701.m #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000159676 ENSGT00940000161734 ENSGT00990000203899 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.A.b ENSGT00950000182930.C Goode s thornscrub tortoise MODERN SPECIES 23 KCNMB2 (ENSGEVG00005008147) #8 ZMAT3 (ENSGEVG00005008132) #9 PIK3CA (ENSGEVG00005008110) #10 ENSGEVG00005008073 ZNF639 (ENSGEVG00005008054) #12 MFN1 (ENSGEVG00005008013) #13 GNB4 (ENSGEVG00005007979) #14 ACTL6A (ENSGEVG00005007939) #15 MRPL47 (ENSGEVG00005007908) #16 NDUFB5 (ENSGEVG00005007886) #17 USP13 (ENSGEVG00005007750) #18 PEX5L (ENSGEVG00005007677) #19 ENSGEVG00005007645 #20 ENSGEVG00005007619 #20 CCDC39 (ENSGEVG00005007473) #21 FXR1 (ENSGEVG00005007363) #22 DNAJC19 (ENSGEVG00005007338) #23 SOX2 (ENSGEVG00005007325) #24 ATP11B (ENSGEVG00005007238) #25 DCUN1D1 (ENSGEVG00005007193) #26 MCCC1 (ENSGEVG00005007168) #27 ENSGEVG00005007146 B3GNT5 (ENSGEVG00005007129) MCF2L2 (ENSGEVG00005005965) ENSGEVG00005005567 RFC4 (ENSGEVG00005005545) EIF4A2 (ENSGEVG00005005476) ENSGEVG00005005440 ENSGEVG00005005418 ENSGEVG00005005406 ENSGEVG00005005386 Abingdon island giant tortoise MODERN SPECIES 76 TBL1XR1 (ENSCABG00000016872) KCNMB2 (ENSCABG00000016876) #8 ZMAT3 (ENSCABG00000016877) #9 PIK3CA (ENSCABG00000016963) #10 ENSCABG00000017237 ZNF639 (ENSCABG00000017240) #12 MFN1 (ENSCABG00000017278) #13 GNB4 (ENSCABG00000019060) #14 ACTL6A (ENSCABG00000019237) #15 MRPL47 (ENSCABG00000019319) #16 NDUFB5 (ENSCABG00000019321) #17 USP13 (ENSCABG00000019324) #18 PEX5L (ENSCABG00000019326) #19 TTC14 (ENSCABG00000019328) #20 CCDC39 (ENSCABG00000019333) #21 FXR1 (ENSCABG00000019346) #22 DNAJC19 (ENSCABG00000019628) #23 SOX2 (ENSCABG00000019639) #24 Chinese turtle MODERN SPECIES 2228 KCNMB2 (ENSPSIG00000015760) #8 ZMAT3 (ENSPSIG00000014839) #9 PIK3CA (ENSPSIG00000014440) #10 ZNF639 (ENSPSIG00000014336) #12 ENSPSIG00000014320 MFN1 (ENSPSIG00000013354) #13 GNB4 (ENSPSIG00000013084) #14 ACTL6A (ENSPSIG00000011750) #15 MRPL47 (ENSPSIG00000011536) #16 NDUFB5 (ENSPSIG00000011327) #17 USP13 (ENSPSIG00000010053) #18 PEX5L (ENSPSIG00000009593) #19 TTC14 (ENSPSIG00000009489) #20 ENSPSIG00000000550 CCDC39 (ENSPSIG00000008365) #21 FXR1 (ENSPSIG00000007616) #22 DNAJC19 (ENSPSIG00000007461) #23 SOX2 (ENSPSIG00000000544) #24 ENSPSIG00000000536 ATP11B (ENSPSIG00000006570) #25 DCUN1D1 (ENSPSIG00000017853) #26 MCCC1 (ENSPSIG00000017510) #27 ENSPSIG00000017491 ENSPSIG00000000526 B3GNT5 (ENSPSIG00000000516) MCF2L2 (ENSPSIG00000017479) RFC4 (ENSPSIG00000017443) EIF4A2 (ENSPSIG00000017404) KNG1 (ENSPSIG00000017354) FETUB (ENSPSIG00000017318) AHSG (ENSPSIG00000017251) Anura ANCESTRAL SPECIES 26 ENSGT00940000153421.a.b ENSGT00950000183039.B.b.a #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 ENSGT00950000183039.B.a #11 ENSGT00940000156335 #12 ENSGT00390000013727.d #13 ENSGT01000000214413.b.a.a #14 ENSGT00940000156305 #15 ENSGT00390000002837 #16 ENSGT00390000009980 #17 ENSGT00940000157401 #18 ENSGT00940000155931 #19 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00940000164015 ENSGT00940000161734 ENSGT00940000159676 ENSGT00550000074917 ENSGT00940000153783.b.b.d ENSGT00950000182930.B ENSGT00950000182930.A.a ENSGT00950000182930.C ENSGT00940000159865 ENSGT00390000003197 ENSGT00390000001143 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 7 MFN1 (ENSLLEG00000027892) #13 GNB4 (ENSLLEG00000027982) #14 ENSLLEG00000028077 ENSLLEG00000028118 #15 ENSLLEG00000028299 #15 ENSLLEG00000028388 #16 NDUFB5 (ENSLLEG00000028412) #17 USP13 (ENSLLEG00000028479) #18 PEX5L (ENSLLEG00000028895) #19 ENSLLEG00000029002 ENSLLEG00000029013 ENSLLEG00000029020 TTC14 (ENSLLEG00000029050) #20 CCDC39 (ENSLLEG00000029259) #21 ENSLLEG00000029315 ENSLLEG00000029445 #22 ENSLLEG00000029888 ENSLLEG00000029895 ENSLLEG00000029902 ENSLLEG00000029908 ENSLLEG00000029915 ENSLLEG00000029924 SOX2 (ENSLLEG00000029927) #24 ENSLLEG00000029935 ENSLLEG00000029941 ENSLLEG00000004795 ATP11B (ENSLLEG00000004892) #25 ENSLLEG00000005167 DCUN1D1 (ENSLLEG00000005195) #26 MCCC1 (ENSLLEG00000005225) #27 LAMP3 (ENSLLEG00000005285) Leishan spiny toad MODERN SPECIES 10 RASD1 (ENSLLEG00000019375) MED9 (ENSLLEG00000019431) ENSLLEG00000019470 NT5M (ENSLLEG00000019503) COPS3 (ENSLLEG00000019687) FLCN (ENSLLEG00000021041) ENSLLEG00000021182 PLD6 (ENSLLEG00000021204) MPRIP (ENSLLEG00000021300) ENSLLEG00000022618 AXIN1 (ENSLLEG00000023214) ENSLLEG00000023438 RGS11 (ENSLLEG00000023987) ENSLLEG00000024515 PGAP6 (ENSLLEG00000024562) ENSLLEG00000024733 #22 PERCC1 (ENSLLEG00000024761) CLCN7 (ENSLLEG00000024792) PTX4 (ENSLLEG00000025074) ENSLLEG00000025141 SEC14L5 (ENSLLEG00000025176) ENSLLEG00000025305 ENSLLEG00000025460 PPL (ENSLLEG00000025498) UBN1 (ENSLLEG00000025751) GLYR1 (ENSLLEG00000026130) ROGDI (ENSLLEG00000027076) ENSLLEG00000027131 ENSLLEG00000027167 ENSLLEG00000027180 ENSLLEG00000027217 Leishan spiny toad MODERN SPECIES ENSLLEG00000003594 ENSLLEG00000003667 NOA1 (ENSLLEG00000003839) ENSLLEG00000003862 ENSLLEG00000003871 ENSLLEG00000003879 ENSLLEG00000003910 ENSLLEG00000003974 ENSLLEG00000003980 ENSLLEG00000003988 ZBTB7A (ENSLLEG00000003998) ENSLLEG00000004002 ENSLLEG00000004022 ENSLLEG00000004042 LSM4 (ENSLLEG00000004045) ENSLLEG00000004051 #22 ENSLLEG00000004060 ENSLLEG00000004068 ENSLLEG00000004075 ENSLLEG00000004080 ENSLLEG00000004084 ENSLLEG00000004087 ATCAY (ENSLLEG00000004102) ENSLLEG00000004129 ENSLLEG00000004130 MRPL54 (ENSLLEG00000004133) ENSLLEG00000004137 APBA3 (ENSLLEG00000005030) TJP3 (ENSLLEG00000005069) PIP5K1C (ENSLLEG00000005163) ENSLLEG00000005325 Frog MODERN SPECIES 5 tbl1xr1 (ENSXETG00000001521) kcnmb2 (ENSXETG00000037867) #8 zmat3 (ENSXETG00000007251) #9 pik3ca (ENSXETG00000007252) #10 kcnmb3 (ENSXETG00000007254) #11 znf639 (ENSXETG00000007256) #12 mfn1 (ENSXETG00000007258) #13 gnb4 (ENSXETG00000007259) #14 actl6a (ENSXETG00000007260) #15 mrpl47 (ENSXETG00000029930) #16 ndufb5 (ENSXETG00000007264) #17 usp13 (ENSXETG00000007265) #18 pex5l (ENSXETG00000032445) #19 ttc14 (ENSXETG00000019435) #20 ccdc39 (ENSXETG00000019437) #21 fxr1 (ENSXETG00000019441) #22 sox2 (ENSXETG00000036807) #24 ENSXETG00000038267 atp11b (ENSXETG00000016814) #25 dcun1d1 (ENSXETG00000016813) #26 mccc1 (ENSXETG00000016826) #27 lamp3 (ENSXETG00000036063) atp13a-like (ENSXETG00000016833) plaat1 (ENSXETG00000032952) atp13a4 (ENSXETG00000016836) opa1 (ENSXETG00000016841) hes1 (ENSXETG00000016852) ENSXETG00000044142 cpn2.2 (ENSXETG00000030284) lrrc15 (ENSXETG00000006623) GP5 (ENSXETG00000003446) Coelacanth MODERN SPECIES 333 TBL1XR1 (ENSLACG00000016986) KCNMB2 (ENSLACG00000015936) #8 ZMAT3 (ENSLACG00000015780) #9 PIK3CA (ENSLACG00000015507) #10 KCNMB3 (ENSLACG00000015425) #11 MFN1 (ENSLACG00000015275) #13 GNB4 (ENSLACG00000014929) #14 ACTL6A (ENSLACG00000014797) #15 MRPL47 (ENSLACG00000014781) #16 NDUFB5 (ENSLACG00000014749) #17 USP13 (ENSLACG00000014314) #18 PEX5L (ENSLACG00000013935) #19 TTC14 (ENSLACG00000012412) #20 CCDC39 (ENSLACG00000012072) #21 FXR1 (ENSLACG00000011290) #22 DNAJC19 (ENSLACG00000011183) #23 SOX2 (ENSLACG00000006560) #24 Actinopterygii ANCESTRAL SPECIES 10 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000153783.b.b.d ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b Neopterygii ANCESTRAL SPECIES 17 ENSGT00390000013701 #20 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000153783.b.b.d ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676 ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b Osteoglossocephalai ANCESTRAL SPECIES 234 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552 #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000153783.b.b.d ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b Clupeocephala ANCESTRAL SPECIES 164 ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00390000003006 ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00940000169190 ENSGT00940000153783.b.b.c.b ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.b ENSGT00950000183039.B.b.c #8 Otomorpha ANCESTRAL SPECIES 134 ENSGT00940000158024.C ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00940000169190 ENSGT00940000153783.b.b.c.b ENSGT00550000074917 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000159676.a ENSGT00940000161734 ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b Clupeiformes ANCESTRAL SPECIES 13 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000153783.b.b.d ENSGT00550000074917 ENSGT00940000159676.a ENSGT00940000161734 ENSGT00940000156299 ENSGT00390000015332 ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.b ENSGT00950000183039.B.b.c #8 Atlantic herring MODERN SPECIES 1 il12rb2 (ENSCHAG00000025366) ENSCHAG00000025347 ATP13A3 (ENSCHAG00000024418) tmem44 (ENSCHAG00000024350) ENSCHAG00000024342 tie1 (ENSCHAG00000024160) mpl (ENSCHAG00000024138) ENSCHAG00000024135 orc1 (ENSCHAG00000024107) prpf38a (ENSCHAG00000024091) dda1 (ENSCHAG00000024078) acap2b (ENSCHAG00000021837) htr2b (ENSCHAG00000021757) psmd1 (ENSCHAG00000020333) ttc14 (ENSCHAG00000020170) #20 fxr1 (ENSCHAG00000019921) #22 dnajc19 (ENSCHAG00000019857) #23 ATP11B (ENSCHAG00000017464) #25 mccc1 (ENSCHAG00000014442) #27 ENSCHAG00000014326 ENSCHAG00000014316 eif4a2 (ENSCHAG00000013854) rfc4 (ENSCHAG00000013734) b3gnt5a (ENSCHAG00000013728) MCF2L2 (ENSCHAG00000011010) ect2 (ENSCHAG00000009113) SPATA16 (ENSCHAG00000009031) nlgn1 (ENSCHAG00000008823) NAALADL2 (ENSCHAG00000008777) tbl1xr1a (ENSCHAG00000008316) ENSCHAG00000008270 #8 Denticle herring MODERN SPECIES 4 TMEM125 (ENSDCDG00000035885) ap1m3 (ENSDCDG00000035884) polr2h (ENSDCDG00000035883) ARMC9 (ENSDCDG00000035882) b3gnt7 (ENSDCDG00000035881) ncl (ENSDCDG00000035876) nppc (ENSDCDG00000035875) alpi.1 (ENSDCDG00000035873) alpi.2 (ENSDCDG00000035872) ppp1r2 (ENSDCDG00000035871) acap2b (ENSDCDG00000035836) htr2b (ENSDCDG00000035822) psmd1 (ENSDCDG00000035814) ENSDCDG00000035811 ttc14 (ENSDCDG00000035805) #20 fxr1 (ENSDCDG00000035796) #22 dnajc19 (ENSDCDG00000035794) #23 ATP11B (ENSDCDG00000035773) #25 mccc1 (ENSDCDG00000035532) #27 ENSDCDG00000035446 ENSDCDG00000035443 eif4a2 (ENSDCDG00000035345) rfc4 (ENSDCDG00000035307) b3gnt5a (ENSDCDG00000035305) ENSDCDG00000035290 ect2 (ENSDCDG00000035162) nlgn1 (ENSDCDG00000035089) NAALADL2 (ENSDCDG00000035081) tbl1xr1a (ENSDCDG00000035070) ENSDCDG00000035062 #8 ZMAT3 (ENSDCDG00000035057) #9 Otophysi ANCESTRAL SPECIES 198 ENSGT00940000158024.C ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00390000018319.a.b.b.b.b ENSGT00940000160221.c ENSGT00940000165866 Characiphysae ANCESTRAL SPECIES 28 ENSGT00940000158024.C ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00390000018319.a.b.b.b.b ENSGT00940000160221.c ENSGT00940000165866 ENSGT00940000157395 ENSGT00390000006932 ENSGT00510000047872 ENSGT00940000159993 ENSGT00390000014000 ENSGT00950000182983.B.a.a Characiphysae_b ANCESTRAL SPECIES 25 ENSGT00940000158024.C ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT00940000153386.A ENSGT01050000244937.a.b.b ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00390000018319.a.b.b.b.b ENSGT00940000160221.c ENSGT00940000165866 ENSGT00940000157395 ENSGT00390000006932 ENSGT00510000047872 ENSGT00940000159993 ENSGT00390000014000 ENSGT00950000182983.B.a.a Characoidei ANCESTRAL SPECIES 26 ENSGT00940000155404.i.b ENSGT00940000157375.c ENSGT00950000182983.B.a.a ENSGT00390000014000 ENSGT00940000159993 ENSGT00510000047872 ENSGT00390000006932 ENSGT00940000157395 ENSGT00940000165866 ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00940000160221.c ENSGT00940000157606 ENSGT00390000018026 ENSGT00390000018195 ENSGT00940000165367 ENSGT00940000158024.C Red-bellied piranha MODERN SPECIES 464 ttc14 (ENSPNAG00000021293) #20 fxr1 (ENSPNAG00000021229) #22 ENSPNAG00000021146 sox2 (ENSPNAG00000021116) #24 Mexicana tetra MODERN SPECIES 20 ARHGEF18 (ENSAMXG00000015886) enc3 (ENSAMXG00000024846) rsph3 (ENSAMXG00000037608) timm13 (ENSAMXG00000040577) ENSAMXG00000015716 lsm7 (ENSAMXG00000037622) sass6 (ENSAMXG00000015631) mfsd14a1 (ENSAMXG00000015606) ENSAMXG00000015560 ppp1r2 (ENSAMXG00000033495) acap2b (ENSAMXG00000001330) htr2b (ENSAMXG00000001352) psmd1 (ENSAMXG00000001344) ENSAMXG00000040290 ttc14 (ENSAMXG00000001353) #20 fxr1 (ENSAMXG00000001357) #22 dnajc19 (ENSAMXG00000001366) #23 sox2 (ENSAMXG00000026046) #24 ATP11B (ENSAMXG00000001413) #25 mccc1 (ENSAMXG00000001531) #27 ENSAMXG00000041597 ENSAMXG00000001614 ENSAMXG00000029044 ncl (ENSAMXG00000001647) nppc (ENSAMXG00000038587) alpi.1 (ENSAMXG00000001702) alpi.2 (ENSAMXG00000042860) ENSAMXG00000038103 b3gnt7 (ENSAMXG00000042723) ARMC9 (ENSAMXG00000001779) polr2h (ENSAMXG00000001800) Electric eel MODERN SPECIES 157 ttc14 (ENSEEEG00000017262) #20 fxr1 (ENSEEEG00000013987) #22 dnajc19 (ENSEEEG00000013910) #23 sox2 (ENSEEEG00000013908) #24 ENSEEEG00000013906 ATP11B (ENSEEEG00000012527) #25 mccc1 (ENSEEEG00000011984) #27 ENSEEEG00000011960 kng1 (ENSEEEG00000011957) ENSEEEG00000011953 MAP1S (ENSEEEG00000011948) ENSEEEG00000011946 mfsd14a1 (ENSEEEG00000011933) sass6 (ENSEEEG00000011815) lsm7 (ENSEEEG00000011778) ENSEEEG00000011775 timm13 (ENSEEEG00000011773) Channel catfish MODERN SPECIES 1 lsm7 (ENSIPUG00000024724) ENSIPUG00000024717 timm13 (ENSIPUG00000024713) enc3 (ENSIPUG00000024711) arhgef18 (ENSIPUG00000024688) insrb (ENSIPUG00000024674) use1 (ENSIPUG00000024672) myo9b (ENSIPUG00000024658) s1pr4 (ENSIPUG00000024637) ncln (ENSIPUG00000024632) cers1 (ENSIPUG00000024624) ENSIPUG00000024621 lamp3 (ENSIPUG00000024619) mccc1 (ENSIPUG00000024615) #27 ATP11B (ENSIPUG00000024606) #25 fxr1 (ENSIPUG00000024597) #22 dnajc19 (ENSIPUG00000024593) #23 sox2 (ENSIPUG00000024592) #24 ttc14 (ENSIPUG00000024586) #20 htr2b (ENSIPUG00000024583) psmd1 (ENSIPUG00000024562) ncl (ENSIPUG00000024556) ppp1r2 (ENSIPUG00000024467) alpi.2 (ENSIPUG00000024465) alpi.1 (ENSIPUG00000024463) ENSIPUG00000024461 nppc (ENSIPUG00000024460) acap2 (ENSIPUG00000024458) b3gnt7 (ENSIPUG00000024457) armc9 (ENSIPUG00000024344) polr2h (ENSIPUG00000024331) Cyprinoidei ANCESTRAL SPECIES 17 ENSGT00390000011314 ENSGT00940000158024.C.e ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026 ENSGT00940000157606 ENSGT00940000163473.i ENSGT00390000015492.B ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00390000018319.a.b.b.b.b ENSGT00940000160221.c ENSGT00940000165866 ENSGT00940000155631 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 272 ENSGT00940000160019 ENSGT01100000263484.A.c.a.a.b.b ENSGT00940000158024.C.e.b ENSGT00390000018026.a ENSGT00940000157606.m ENSGT00940000163473.i.c ENSGT00390000015492.B.e ENSGT00950000183063.c.b.b.e ENSGT00950000183063.c.b.a.y ENSGT00390000004757.a.a ENSGT00940000156389.a.q ENSGT00940000153386.A.k ENSGT01050000244937.a.b.b.k ENSGT00390000013701.r #20 ENSGT00390000013701.q #20 ENSGT00950000183189.a.b.a.a #22 ENSGT00940000154384.a #23 ENSGT00940000156162.C.a #25 ENSGT00950000182899.C.a.a ENSGT00950000182930.B.e ENSGT00390000018319.a.b.b.b.b.a ENSGT00940000160221.c.c ENSGT00950000183209.b.a.a.h.b.b ENSGT00940000164764.j.b.b ENSGT00940000165109.a ENSGT00940000157908.h.a ENSGT00940000157560.d.a.h ENSGT00940000163836.a.a ENSGT00940000155654.gb Cyprininae_a ANCESTRAL SPECIES 143 ENSGT00940000160019.h ENSGT01100000263484.A.c.a.a.b.b ENSGT00940000158024.C.e.b ENSGT00390000018026.a ENSGT00940000157606.m ENSGT00940000163473.i.c ENSGT00390000015492.B.e ENSGT00950000183063.c.b.b.e ENSGT00950000183063.c.b.a.y ENSGT00390000004757.a.a ENSGT00940000156389.a.q ENSGT00940000153386.A.k ENSGT01050000244937.a.b.b.k ENSGT00390000013701.r #20 ENSGT00390000013701.q #20 ENSGT00950000183189.a.b.a.a #22 ENSGT00940000154384.a #23 ENSGT00940000156162.C.a #25 ENSGT00950000182899.C.a.a ENSGT00950000182930.B.e ENSGT00390000018319.a.b.b.b.b.a ENSGT00940000160221.c.c ENSGT00940000165866.f ENSGT00940000155631.i ENSGT00950000183209.b.a.a.h.b.b ENSGT00940000164764.j.b.a ENSGT00940000165109.a ENSGT00940000157908.h.a ENSGT00940000157560.d.a.h ENSGT00940000163836.a.a ENSGT00940000154196.b.d Common carp reference MODERN SPECIES 43 ENSCCRG00000067306 ENSCCRG00000072314 ENSCCRG00000035534 ENSCCRG00000022726 b3gnt7 (ENSCCRG00000079309) ncl (ENSCCRG00000078126) nppc (ENSCCRG00000001661) ENSCCRG00000035138 alpi.2 (ENSCCRG00000070873) ppp1r2 (ENSCCRG00000079721) acap2b (ENSCCRG00000077846) psmd1 (ENSCCRG00000069068) htr2b (ENSCCRG00000035197) ENSCCRG00000082803 ttc14 (ENSCCRG00000038514) #20 fxr1 (ENSCCRG00000042409) #22 dnajc19 (ENSCCRG00000079027) #23 sox2 (ENSCCRG00000081265) #24 ATP11B (ENSCCRG00000035657) #25 ENSCCRG00000018351 ENSCCRG00000018348 ENSCCRG00000004905 ENSCCRG00000004912 ENSCCRG00000004924 ENSCCRG00000038655 ENSCCRG00000074091 ENSCCRG00000066861 ENSCCRG00000069473 ENSCCRG00000049772 ENSCCRG00000077903 ENSCCRG00000001443 Golden-line barbel MODERN SPECIES 404 alpi.1 (ENSSGRG00000048028) alpi.2 (ENSSGRG00000048036) ENSSGRG00000048037 ppp1r2 (ENSSGRG00000048038) acap2b (ENSSGRG00000048045) psmd1 (ENSSGRG00000048361) htr2b (ENSSGRG00000049083) ENSSGRG00000049086 #20 ttc14 (ENSSGRG00000049087) #20 fxr1 (ENSSGRG00000049111) #22 ENSSGRG00000051585 ATP11B (ENSSGRG00000051611) #25 ENSSGRG00000051888 kng1 (ENSSGRG00000051890) ENSSGRG00000051891 CARTPT (ENSSGRG00000051892) ENSSGRG00000051894 ACY1 (ENSSGRG00000051899) ENSSGRG00000051976 ENSSGRG00000051980 ENSSGRG00000052050 soul4 (ENSSGRG00000052145) ptk7a (ENSSGRG00000052157) ENSSGRG00000052325 ENSSGRG00000052688 Goldfish MODERN SPECIES 41 ENSCARG00000040346 ENSCARG00000040762 ENSCARG00000040862 ENSCARG00000040980 ENSCARG00000041040 NMUR1 (ENSCARG00000041053) alpi.1 (ENSCARG00000041115) alpi.2 (ENSCARG00000041650) ppp1r2 (ENSCARG00000041668) acap2b (ENSCARG00000042167) ENSCARG00000050547 psmd1 (ENSCARG00000050678) htr2b (ENSCARG00000050868) ENSCARG00000050887 ttc14 (ENSCARG00000050909) #20 fxr1 (ENSCARG00000051163) #22 dnajc19 (ENSCARG00000053405) #23 ENSCARG00000053504 ATP11B (ENSCARG00000053561) #25 ENSCARG00000054224 ENSCARG00000054235 CARTPT (ENSCARG00000054245) ENSCARG00000054262 ENSCARG00000054295 ENSCARG00000054307 ENSCARG00000019371 ENSCARG00000019388 ENSCARG00000019494 klc4 (ENSCARG00000019516) soul4 (ENSCARG00000019652) ptk7a (ENSCARG00000019728) Cyprininae ANCESTRAL SPECIES 472 ENSGT01050000244937.a.b.b.l ENSGT00940000153386.A.l ENSGT00950000183189.a.b.a.b #22 ENSGT00940000154384.b #23 ENSGT00940000160614.r #24 ENSGT00940000156162.C.b #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a.b ENSGT00950000182930.B.f ENSGT00390000018319.a.b.b.b.b.b ENSGT00940000160221.c.d ENSGT00940000165866 ENSGT00940000155631.j ENSGT00390000005351.p ENSGT00940000155781.q.b ENSGT00950000183146.b.b.b ENSGT01030000234648.a.a.c.a.e ENSGT00390000001505.e Goldfish MODERN SPECIES 14 NMUR1 (ENSCARG00000012560) hykk.2 (ENSCARG00000012566) ENSCARG00000012592 ENSCARG00000013306 polr2h (ENSCARG00000013316) ARMC9 (ENSCARG00000013325) b3gnt7 (ENSCARG00000013339) ncl (ENSCARG00000013344) nppc (ENSCARG00000013356) alpi.1 (ENSCARG00000013358) alpi.2 (ENSCARG00000013416) ppp1r2 (ENSCARG00000013433) acap2b (ENSCARG00000013487) psmd1 (ENSCARG00000014038) htr2b (ENSCARG00000014146) fxr1 (ENSCARG00000014182) #22 dnajc19 (ENSCARG00000014749) #23 sox2 (ENSCARG00000014763) #24 ATP11B (ENSCARG00000014824) #25 mccc1 (ENSCARG00000016210) #27 ENSCARG00000016486 ENSCARG00000016496 CARTPT (ENSCARG00000016507) MAP1S (ENSCARG00000016516) ENSCARG00000016529 ACY1 (ENSCARG00000016559) ENSCARG00000016718 ENSCARG00000016734 ENSCARG00000016749 ENSCARG00000016767 ENSCARG00000016774 Cyprininae_a ANCESTRAL SPECIES 300 ENSGT01100000263484.A.c.a.a.b.a ENSGT00390000011314 ENSGT00940000158024.C.e.a ENSGT00940000165367 ENSGT00390000018195 ENSGT00390000018026.b ENSGT00940000157606.n ENSGT00940000163473.i.d ENSGT00390000015492.B.f ENSGT00950000183063.c.b.b.f ENSGT00950000183063.c.b.a.z ENSGT00390000004757.b ENSGT00940000156389.a.r ENSGT01050000244937.a.b.b.l ENSGT00940000153386.A.l ENSGT00950000183189.a.b.a.b #22 ENSGT00940000154384.b #23 ENSGT00940000160614.r #24 ENSGT00940000156162.C.b #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a.b ENSGT00950000182930.B.f ENSGT00390000018319.a.b.b.b.b.b ENSGT00940000160221.c.d ENSGT00940000165866.e ENSGT00940000155631.j ENSGT00390000005351.p.a ENSGT00940000155781.q.b ENSGT00950000183146.b.b.b ENSGT01030000234648.a.a.c.a.e ENSGT00390000001505.e Common carp reference MODERN SPECIES 5 ENSCCRG00000045664 hykk.2 (ENSCCRG00000045661) ENSCCRG00000018560 ENSCCRG00000028751 ENSCCRG00000028719 b3gnt7 (ENSCCRG00000022708) ncl (ENSCCRG00000077246) nppc (ENSCCRG00000063613) ENSCCRG00000044114 alpi.2 (ENSCCRG00000028702) ENSCCRG00000024903 ENSCCRG00000019151 psmd1 (ENSCCRG00000035208) htr2b (ENSCCRG00000057644) ENSCCRG00000064879 fxr1 (ENSCCRG00000042904) #22 dnajc19 (ENSCCRG00000042262) #23 sox2 (ENSCCRG00000054914) #24 ATP11B (ENSCCRG00000040362) #25 mccc1 (ENSCCRG00000040127) #27 ENSCCRG00000040078 ENSCCRG00000055191 ENSCCRG00000076673 ENSCCRG00000070613 ENSCCRG00000057997 ENSCCRG00000052939 ENSCCRG00000072056 ENSCCRG00000066410 ENSCCRG00000078543 ENSCCRG00000054158 ENSCCRG00000065730 Golden-line barbel MODERN SPECIES 1402 ttc14 (ENSSGRG00000009253) #20 fxr1 (ENSSGRG00000009343) #22 dnajc19 (ENSSGRG00000010381) #23 ENSSGRG00000010383 ENSSGRG00000010384 Zebrafish MODERN SPECIES 14 hps3 (ENSDARG00000015749) cp (ENSDARG00000010312) tm4sf18 (ENSDARG00000060668) tm4sf4 (ENSDARG00000040747) wwtr1 (ENSDARG00000067719) commd2 (ENSDARG00000003373) ENSDARG00000070958 kcnh1b (ENSDARG00000023236) ENSDARG00000053973 ahsg1 (ENSDARG00000026764) ppp1r2 (ENSDARG00000054007) acap2b (ENSDARG00000060783) htr2b (ENSDARG00000115925) psmd1 (ENSDARG00000003189) ttc14 (ENSDARG00000013845) #20 fxr1 (ENSDARG00000022968) #22 dnajc19 (ENSDARG00000044420) #23 sox2 (ENSDARG00000070913) #24 ATP11B (ENSDARG00000101094) #25 ENSDARG00000096237 si:dkey-37m8.11 (ENSDARG00000040230) ENSDARG00000096423 trim35-20 (ENSDARG00000070847) mccc1 (ENSDARG00000102538) #27 kng1 (ENSDARG00000022372) CARTPT (ENSDARG00000070930) MAP1S (ENSDARG00000060805) ENSDARG00000089661 acy1 (ENSDARG00000038475) ACY1 (ENSDARG00000111129) ENSDARG00000095913 Euteleosteomorpha ANCESTRAL SPECIES 244 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00950000183039.B.b.c #8 ENSGT00940000153421.a.a.b ENSGT01030000234598.a.b ENSGT00940000155789 ENSGT00390000015332 ENSGT00940000156299 ENSGT00940000159676.a Acanthomorphata ANCESTRAL SPECIES 116 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Cod MODERN SPECIES 3 pdcb (ENSGMOG00000034832) ptgs2b (ENSGMOG00000010880) PLA2G4A (ENSGMOG00000010862) arpc5b (ENSGMOG00000010856) HMCN1 (ENSGMOG00000010733) ivns1abpa (ENSGMOG00000004931) ENSGMOG00000036754 TRMT1L (ENSGMOG00000009535) niban1a (ENSGMOG00000009550) kifap3a (ENSGMOG00000009568) ntmt2 (ENSGMOG00000031238) MAST2 (ENSGMOG00000015409) PIK3R3 (ENSGMOG00000000803) TSPAN1 (ENSGMOG00000003195) pomgnt1 (ENSGMOG00000003207) ENSGMOG00000000446 #22 dnajc19 (ENSGMOG00000000473) #23 ENSGMOG00000019777 #24 ATP11B (ENSGMOG00000008504) #25 ENSGMOG00000008521 #27 ENSGMOG00000032839 ENSGMOG00000008540 ##10 ENSGMOG00000008558 #9 ENSGMOG00000014103 ENSGMOG00000030815 ENSGMOG00000003860 ENSGMOG00000028710 MELTF (ENSGMOG00000018637) NCBP2AS2 (ENSGMOG00000030915) ENSGMOG00000018655 NCBP2 (ENSGMOG00000018657) Euacanthomorphacea ANCESTRAL SPECIES 31 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.a Pinecone sodierfish MODERN SPECIES 18 ENSMMDG00005019479 uchl5 (ENSMMDG00005019470) glrx2 (ENSMMDG00005019466) b3galt2 (ENSMMDG00005019465) ENSMMDG00005019461 ENSMMDG00005019458 ENSMMDG00005019437 ENSMMDG00005019423 ENSMMDG00005019412 ENSMMDG00005019407 fnbp1l (ENSMMDG00005019352) bcar3 (ENSMMDG00005019341) ENSMMDG00005019337 ENSMMDG00005019335 ENSMMDG00005019330 fxr1 (ENSMMDG00005016938) #22 dnajc19 (ENSMMDG00005016880) #23 sox2 (ENSMMDG00005016876) #24 ATP11B (ENSMMDG00005011889) #25 mccc1 (ENSMMDG00005007241) #27 ENSMMDG00005007138 kng1 (ENSMMDG00005007133) PIK3CA (ENSMMDG00005007127) ##10 ENSMMDG00005007018 #9 RNF14 (ENSMMDG00005007010) ENSMMDG00005007006 stxbp3 (ENSMMDG00005006114) FNDC7 (ENSMMDG00005006091) ENSMMDG00005006089 ENSMMDG00005006086 ENSMMDG00005006084 Percomorphaceae ANCESTRAL SPECIES 32 ENSGT00940000157937.b ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000169454 ENSGT00940000157064.a.b.a Tiger tail seahorse DUPLICATION Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 65 naprt (ENSHCOG00000009077) ENSHCOG00000009087 ENSHCOG00000009206 ADCYAP1R1 (ENSHCOG00000009351) ENSHCOG00000009385 aspm (ENSHCOG00000009448) depdc1a (ENSHCOG00000009576) rpe65b (ENSHCOG00000009617) si:ch211-198n5.11 (ENSHCOG00000009855) fnbp1l (ENSHCOG00000009923) bcar3 (ENSHCOG00000009968) hps3 (ENSHCOG00000010024) ENSHCOG00000000316 #20 ttc14 (ENSHCOG00000010117) #20 ENSHCOG00000010144 FXR1 (ENSHCOG00000010198) #22 fxr1 (ENSHCOG00000010273) #22 ENSHCOG00000010298 fxr1 (ENSHCOG00000010337) #22 dnajc19 (ENSHCOG00000010350) #23 ENSHCOG00000010353 sox2 (ENSHCOG00000010386) #24 ENSHCOG00000010410 #25 ATP11B (ENSHCOG00000010454) #25 mccc1 (ENSHCOG00000010503) #27 ENSHCOG00000010517 ENSHCOG00000010526 PIK3CA (ENSHCOG00000010578) ##10 ENSHCOG00000010592 ##10 PIK3CA (ENSHCOG00000010611) ##10 ZMAT3 (ENSHCOG00000010624) #9 Tiger tail seahorse MODERN SPECIES 65 ADCYAP1R1 (ENSHCOG00000009351) ENSHCOG00000009385 aspm (ENSHCOG00000009448) depdc1a (ENSHCOG00000009576) rpe65b (ENSHCOG00000009617) si:ch211-198n5.11 (ENSHCOG00000009855) fnbp1l (ENSHCOG00000009923) bcar3 (ENSHCOG00000009968) hps3 (ENSHCOG00000010024) ENSHCOG00000000316 #20 ttc14 (ENSHCOG00000010117) #20 ENSHCOG00000010144 FXR1 (ENSHCOG00000010198) #22 fxr1 (ENSHCOG00000010273) #22 ENSHCOG00000010298 fxr1 (ENSHCOG00000010337) #22 dnajc19 (ENSHCOG00000010350) #23 ENSHCOG00000010353 sox2 (ENSHCOG00000010386) #24 ENSHCOG00000010410 #25 ATP11B (ENSHCOG00000010454) #25 mccc1 (ENSHCOG00000010503) #27 ENSHCOG00000010517 ENSHCOG00000010526 PIK3CA (ENSHCOG00000010578) ##10 ENSHCOG00000010592 ##10 PIK3CA (ENSHCOG00000010611) ##10 ZMAT3 (ENSHCOG00000010624) #9 ENSHCOG00000010632 ENSHCOG00000010650 ENSHCOG00000010665 Tiger tail seahorse MODERN SPECIES 65 ENSHCOG00000009087 ENSHCOG00000009206 ADCYAP1R1 (ENSHCOG00000009351) ENSHCOG00000009385 aspm (ENSHCOG00000009448) depdc1a (ENSHCOG00000009576) rpe65b (ENSHCOG00000009617) si:ch211-198n5.11 (ENSHCOG00000009855) fnbp1l (ENSHCOG00000009923) bcar3 (ENSHCOG00000009968) hps3 (ENSHCOG00000010024) ENSHCOG00000000316 #20 ttc14 (ENSHCOG00000010117) #20 ENSHCOG00000010144 FXR1 (ENSHCOG00000010198) #22 fxr1 (ENSHCOG00000010273) #22 ENSHCOG00000010298 fxr1 (ENSHCOG00000010337) #22 dnajc19 (ENSHCOG00000010350) #23 ENSHCOG00000010353 sox2 (ENSHCOG00000010386) #24 ENSHCOG00000010410 #25 ATP11B (ENSHCOG00000010454) #25 mccc1 (ENSHCOG00000010503) #27 ENSHCOG00000010517 ENSHCOG00000010526 PIK3CA (ENSHCOG00000010578) ##10 ENSHCOG00000010592 ##10 PIK3CA (ENSHCOG00000010611) ##10 ZMAT3 (ENSHCOG00000010624) #9 ENSHCOG00000010632 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000157064.a.b.a Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000154967.b.b.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00940000180153 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000154967.b.b.a ENSGT00940000154967.b.a ENSGT00940000154386 ENSGT00940000174597 ENSGT00940000154967.b.b.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00940000154967.b.b.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 620 ttc14 (ENSLBEG00000015175) #20 fxr1 (ENSLBEG00000015038) #22 sox2 (ENSLBEG00000014895) #24 Ballan wrasse MODERN SPECIES 2497 fxr1 (ENSLBEG00000011791) #22 Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00940000154386 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b ENSGT00390000004798 Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000157937.b ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154386 ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b ENSGT00390000004798 Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000157937.b ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154386 ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b ENSGT00390000004798 European seabass MODERN SPECIES 17 ENSDLAG00005015366 ENSDLAG00005007978 ENSDLAG00005007930 stxbp3 (ENSDLAG00005006702) ENSDLAG00005006642 ENSDLAG00005006638 ENSDLAG00005029063 #9 ENSDLAG00005006577 ##10 ENSDLAG00005006557 ENSDLAG00005006545 ENSDLAG00005034823 ENSDLAG00005006459 ENSDLAG00005021297 ENSDLAG00005027302 ttc14 (ENSDLAG00005021228) #20 fxr1 (ENSDLAG00005020320) #22 dnajc19 (ENSDLAG00005029415) #23 sox2 (ENSDLAG00005034867) #24 ATP11B (ENSDLAG00005017428) #25 mccc1 (ENSDLAG00005019674) #27 si:ch211-198n5.11 (ENSDLAG00005027011) ENSDLAG00005016891 depdc1a (ENSDLAG00005016845) aspm (ENSDLAG00005016604) ENSDLAG00005028523 ENSDLAG00005030889 ENSDLAG00005016552 b3galt2 (ENSDLAG00005028575) uchl5 (ENSDLAG00005016459) ENSDLAG00005016445 RGS13 (ENSDLAG00005028322) Large yellow croaker MODERN SPECIES 489 lrp8 (ENSLCRG00005009173) dmrt2b (ENSLCRG00005009628) ENSLCRG00005009630 ebna1bp2 (ENSLCRG00005009633) TMEM125 (ENSLCRG00005009641) ap1m3 (ENSLCRG00005009670) tie1 (ENSLCRG00005010424) mpl (ENSLCRG00005011070) DDAH1 (ENSLCRG00005011074) ccn1 (ENSLCRG00005011076) ZNHIT6 (ENSLCRG00005011077) ENSLCRG00005011082 hps3 (ENSLCRG00005011090) ENSLCRG00005011092 ttc14 (ENSLCRG00005011096) #20 fxr1 (ENSLCRG00005011130) #22 dnajc19 (ENSLCRG00005014678) #23 sox2 (ENSLCRG00005014679) #24 ATP11B (ENSLCRG00005014687) #25 mccc1 (ENSLCRG00005015122) #27 ENSLCRG00005017408 ENSLCRG00005017410 ENSLCRG00005017411 PIK3CA (ENSLCRG00005017419) ##10 ENSLCRG00005017430 #9 RNF14 (ENSLCRG00005017434) ENSLCRG00005017436 stxbp3 (ENSLCRG00005017443) ENSLCRG00005017550 ENSLCRG00005017551 eaf2 (ENSLCRG00005017553) Gilthead seabream MODERN SPECIES 2 uchl5 (ENSSAUG00010012408) glrx2 (ENSSAUG00010012405) b3galt2 (ENSSAUG00010012403) ENSSAUG00010012400 ENSSAUG00010012399 ENSSAUG00010012390 ENSSAUG00010012381 aspm (ENSSAUG00010012325) depdc1a (ENSSAUG00010012316) si:ch211-198n5.11 (ENSSAUG00010012112) rpe65b (ENSSAUG00010012087) fnbp1l (ENSSAUG00010012084) bcar3 (ENSSAUG00010011607) hps3 (ENSSAUG00010011586) ttc14 (ENSSAUG00010011576) #20 fxr1 (ENSSAUG00010007117) #22 Tim14 (ENSSAUG00010007093) #23 ENSSAUG00010007090 sox2 (ENSSAUG00010007089) #24 ATP11B (ENSSAUG00010006965) #25 mccc1 (ENSSAUG00010002097) #27 ENSSAUG00010001984 ENSSAUG00010001979 PIK3CA (ENSSAUG00010001967) ##10 ENSSAUG00010001961 #9 ENSSAUG00010001957 ENSSAUG00010001956 ENSSAUG00010001893 stxbp3 (ENSSAUG00010001436) FNDC7 (ENSSAUG00010001386) ENSSAUG00010001377 Perciformes ANCESTRAL SPECIES 8 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00940000154386 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00940000154386 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a Lumpfish MODERN SPECIES 19 b3galt2 (ENSCLMG00005016734) ENSCLMG00005016729 ENSCLMG00005016696 aspm (ENSCLMG00005016693) depdc1a (ENSCLMG00005016687) rpe65b (ENSCLMG00005016684) si:ch211-198n5.11 (ENSCLMG00005016678) fnbp1l (ENSCLMG00005016346) bcar3 (ENSCLMG00005016124) ENSCLMG00005016123 hps3 (ENSCLMG00005016121) ENSCLMG00005016120 ENSCLMG00005016119 ttc14 (ENSCLMG00005016117) #20 ENSCLMG00005016115 fxr1 (ENSCLMG00005015995) #22 dnajc19 (ENSCLMG00005015992) #23 sox2 (ENSCLMG00005015991) #24 ENSCLMG00005015990 ATP11B (ENSCLMG00005014101) #25 mccc1 (ENSCLMG00005011992) #27 ENSCLMG00005011979 ENSCLMG00005011978 PIK3CA (ENSCLMG00005011927) ##10 ZMAT3 (ENSCLMG00005011814) #9 ENSCLMG00005011810 ENSCLMG00005011809 ENSCLMG00005011807 lrrc40 (ENSCLMG00005011804) ENSCLMG00005011803 ENSCLMG00005011801 Stickleback MODERN SPECIES 8 b3galt2 (ENSGACG00000005881) ENSGACG00000005883 ENSGACG00000005908 ENSGACG00000005911 ENSGACG00000005919 depdc1a (ENSGACG00000005920) rpe65b (ENSGACG00000005930) si:ch211-198n5.11 (ENSGACG00000005939) fnbp1l (ENSGACG00000005948) bcar3 (ENSGACG00000005999) ENSGACG00000006012 hps3 (ENSGACG00000006016) ttc14 (ENSGACG00000006030) #20 ENSGACG00000006044 ENSGACG00000006048 fxr1 (ENSGACG00000006052) #22 dnajc19 (ENSGACG00000006076) #23 ENSGACG00000006099 sox2 (ENSGACG00000006100) #24 ATP11B (ENSGACG00000006104) #25 mccc1 (ENSGACG00000006125) #27 ENSGACG00000006138 PIK3CA (ENSGACG00000006156) ##10 ZMAT3 (ENSGACG00000006175) #9 ENSGACG00000006180 LRRC7 (ENSGACG00000006189) ENSGACG00000006210 ENSGACG00000006216 MELTF (ENSGACG00000006222) fkbp2 (ENSGACG00000006229) NCBP2AS2 (ENSGACG00000006237) Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00940000154386 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a Pike perch MODERN SPECIES 59 ENSSLUG00000010772 aspm (ENSSLUG00000010814) ENSSLUG00000011357 tm4sf4 (ENSSLUG00000011363) ENSSLUG00000011367 depdc1a (ENSSLUG00000011374) rpe65b (ENSSLUG00000011422) si:ch211-198n5.11 (ENSSLUG00000012316) fnbp1l (ENSSLUG00000012423) ENSSLUG00000012471 bcar3 (ENSSLUG00000012491) hps3 (ENSSLUG00000013002) ENSSLUG00000013012 ttc14 (ENSSLUG00000009678) #20 ENSSLUG00000009681 fxr1 (ENSSLUG00000009708) #22 dnajc19 (ENSSLUG00000010014) #23 ATP11B (ENSSLUG00000010144) #25 mccc1 (ENSSLUG00000013622) #27 ENSSLUG00000014011 kng1 (ENSSLUG00000014020) PIK3CA (ENSSLUG00000014031) ##10 ZMAT3 (ENSSLUG00000014062) #9 ENSSLUG00000014164 ENSSLUG00000014175 stxbp3 (ENSSLUG00000014209) ENSSLUG00000014440 ENSSLUG00000014445 henmt1 (ENSSLUG00000014450) fam102bb (ENSSLUG00000014456) slc25a24 (ENSSLUG00000014480) Channel bull blenny MODERN SPECIES 18 ENSCGOG00000000699 ENSCGOG00000000722 aspm (ENSCGOG00000000756) ENSCGOG00000000909 rpe65c (ENSCGOG00000000924) depdc1a (ENSCGOG00000001060) si:ch211-198n5.11 (ENSCGOG00000001067) fnbp1l (ENSCGOG00000001074) bcar3 (ENSCGOG00000001164) hps3 (ENSCGOG00000001187) ENSCGOG00000001197 ENSCGOG00000001199 ENSCGOG00000001200 ENSCGOG00000001201 ttc14 (ENSCGOG00000001210) #20 fxr1 (ENSCGOG00000001380) #22 dnajc19 (ENSCGOG00000002325) #23 ENSCGOG00000002332 ENSCGOG00000002335 ATP11B (ENSCGOG00000002429) #25 mccc1 (ENSCGOG00000004793) #27 ENSCGOG00000006972 ENSCGOG00000006973 PIK3CA (ENSCGOG00000006989) ##10 ZMAT3 (ENSCGOG00000007325) #9 ENSCGOG00000007392 ENSCGOG00000007396 ENSCGOG00000007397 stxbp3 (ENSCGOG00000007419) ENSCGOG00000009200 FNDC7 (ENSCGOG00000009208) Tetraodontidae DUPLICATION Tetraodontidae ANCESTRAL SPECIES ENSGT00950000183189.a.b.a.g #22 Tetraodon MODERN SPECIES 4 ENSTNIG00000008797 atp6v1e1a (ENSTNIG00000008796) bcl2l13 (ENSTNIG00000008795) wee2 (ENSTNIG00000008794) dennd11 (ENSTNIG00000008793) agk (ENSTNIG00000008792) nup205 (ENSTNIG00000008791) fgd4a (ENSTNIG00000008790) BICD1 (ENSTNIG00000008789) slc23a4 (ENSTNIG00000008788) ENSTNIG00000008787 TMTC2 (ENSTNIG00000008786) CRACR2A (ENSTNIG00000008785) ENSTNIG00000008784 ENSTNIG00000008783 ENSTNIG00000006816 #22 TSPAN9 (ENSTNIG00000019258) tspan33b (ENSTNIG00000019257) ttc38 (ENSTNIG00000019256) ENSTNIG00000000532 mical3a (ENSTNIG00000000566) ENSTNIG00000019255 hipk2 (ENSTNIG00000019254) si:dkey-24l11.2 (ENSTNIG00000019253) kti12 (ENSTNIG00000019252) znf592 (ENSTNIG00000019251) slc28a1 (ENSTNIG00000019250) ENSTNIG00000019249 ENSTNIG00000019248 FRMD5 (ENSTNIG00000019247) BLM (ENSTNIG00000019246) Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00510000046975.b ENSGT00950000183014.f.b.b.a.a ENSGT00950000183044.a.b ENSGT00390000004681.a.a ENSGT00940000154573 ENSGT00740000115898 ENSGT00940000156211.a.a ENSGT00440000033640.h.b ENSGT00940000162303.a.a ENSGT00940000163866.a.b ENSGT00940000162937.a.a ENSGT00390000010872 ENSGT00940000166222 ENSGT00940000157153.x ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a.h #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C.f #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b Fugu MODERN SPECIES 12 pycr3 (ENSTRUG00000006233) bmb (ENSTRUG00000022483) GFUS (ENSTRUG00000006484) serpinb1 (ENSTRUG00000006831) MYLK4 (ENSTRUG00000007027) gmds (ENSTRUG00000023830) foxc1b (ENSTRUG00000007340) ENSTRUG00000007367 foxq1b (ENSTRUG00000001789) exoc2 (ENSTRUG00000001810) ENSTRUG00000021519 ENSTRUG00000002946 ENSTRUG00000003462 ENSTRUG00000026690 ttc14 (ENSTRUG00000001224) #20 fxr1 (ENSTRUG00000003486) #22 dnajc19 (ENSTRUG00000004352) #23 sox2 (ENSTRUG00000004861) #24 ENSTRUG00000031205 #25 ATP11B (ENSTRUG00000002878) #25 ENSTRUG00000033406 #25 mccc1 (ENSTRUG00000003436) #27 ENSTRUG00000024510 ENSTRUG00000003951 PIK3CA (ENSTRUG00000004021) ##10 ENSTRUG00000031285 #9 ENSTRUG00000020845 ENSTRUG00000005137 stxbp3 (ENSTRUG00000005412) FNDC7 (ENSTRUG00000006252) ENSTRUG00000029469 Tetraodon MODERN SPECIES NOS1AP (ENSTNIG00000008233) ENSTNIG00000008232 pycr3 (ENSTNIG00000008231) GFUS (ENSTNIG00000008228) ENSTNIG00000008227 GFUS (ENSTNIG00000008230) SERPINB1 (ENSTNIG00000008229) MYLK4 (ENSTNIG00000008226) gmds (ENSTNIG00000008225) foxc1b (ENSTNIG00000001080) ENSTNIG00000008224 exoc2 (ENSTNIG00000008223) ENSTNIG00000008222 ENSTNIG00000004324 ttc14 (ENSTNIG00000003789) #20 fxr1 (ENSTNIG00000003790) #22 dnajc19 (ENSTNIG00000003791) #23 sox2 (ENSTNIG00000003970) #24 ATP11B (ENSTNIG00000006777) #25 mccc1 (ENSTNIG00000006778) #27 ENSTNIG00000006779 PIK3CA (ENSTNIG00000006780) ##10 ZMAT3 (ENSTNIG00000006781) #9 ENSTNIG00000006782 ENSTNIG00000006783 stxbp3 (ENSTNIG00000006784) ENSTNIG00000006785 ENSTNIG00000006982 ENSTNIG00000006786 ENSTNIG00000005506 henmt1 (ENSTNIG00000003313) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000154967.b.b.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00940000180153 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00390000004674.j ENSGT00940000157064.a.b.b.a.a Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00980000203290 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00980000203290 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h Climbing perch MODERN SPECIES 17 b3galt2 (ENSATEG00000001043) ENSATEG00000027725 ENSATEG00000000392 ENSATEG00000000713 ENSATEG00000026162 ENSATEG00000028555 ENSATEG00000026295 aspm (ENSATEG00000000379) depdc1a (ENSATEG00000000365) ENSATEG00000000298 si:ch211-198n5.11 (ENSATEG00000000222) ENSATEG00000000143 ENSATEG00000000123 ENSATEG00000000110 ttc14 (ENSATEG00000000101) #20 fxr1 (ENSATEG00000022488) #22 dnajc19 (ENSATEG00000000021) #23 ATP11B (ENSATEG00000022414) #25 mccc1 (ENSATEG00000022375) #27 ENSATEG00000022365 ENSATEG00000022305 ENSATEG00000022254 ##10 ENSATEG00000022244 #9 ENSATEG00000022229 ENSATEG00000022213 stxbp3 (ENSATEG00000022183) ENSATEG00000022164 ENSATEG00000030134 ENSATEG00000022128 ENSATEG00000022099 ENSATEG00000022075 Siamese fighting fish MODERN SPECIES 15 uchl5 (ENSBSLG00000009763) glrx2 (ENSBSLG00000009688) b3galt2 (ENSBSLG00000009583) ENSBSLG00000009576 ENSBSLG00000009540 ENSBSLG00000009533 aspm (ENSBSLG00000009159) depdc1a (ENSBSLG00000009033) RPE65 (ENSBSLG00000008855) si:ch211-198n5.11 (ENSBSLG00000008830) fnbp1l (ENSBSLG00000008642) bcar3 (ENSBSLG00000008468) ENSBSLG00000008414 hps3 (ENSBSLG00000008206) ttc14 (ENSBSLG00000008115) #20 fxr1 (ENSBSLG00000005633) #22 dnajc19 (ENSBSLG00000004844) #23 sox2 (ENSBSLG00000004745) #24 sox2 (ENSBSLG00000004255) #24 ATP11B (ENSBSLG00000003903) #25 mccc1 (ENSBSLG00000002699) #27 ENSBSLG00000002494 ENSBSLG00000002480 PIK3CA (ENSBSLG00000002314) ##10 ENSBSLG00000002185 #9 ENSBSLG00000001857 ENSBSLG00000001848 ZMAT3 (ENSBSLG00000001831) #9 ENSBSLG00000001819 ENSBSLG00000001806 stxbp3 (ENSBSLG00000001607) Zig-zag eel MODERN SPECIES 18 RGS13 (ENSMAMG00000025084) ENSMAMG00000013165 uchl5 (ENSMAMG00000013126) glrx2 (ENSMAMG00000013113) b3galt2 (ENSMAMG00000013098) cfh (ENSMAMG00000012979) ENSMAMG00000028004 aspm (ENSMAMG00000012926) depdc1a (ENSMAMG00000012900) ENSMAMG00000012864 si:ch211-198n5.11 (ENSMAMG00000012852) ENSMAMG00000012800 ENSMAMG00000012752 ENSMAMG00000012718 ttc14 (ENSMAMG00000012687) #20 fxr1 (ENSMAMG00000012607) #22 dnajc19 (ENSMAMG00000012673) #23 sox2 (ENSMAMG00000012589) #24 ATP11B (ENSMAMG00000012551) #25 mccc1 (ENSMAMG00000012532) #27 ENSMAMG00000012509 ENSMAMG00000012500 ENSMAMG00000012399 ##10 ENSMAMG00000012349 #9 ENSMAMG00000012343 ENSMAMG00000012326 stxbp3 (ENSMAMG00000012303) ENSMAMG00000012225 ENSMAMG00000012208 HENMT1 (ENSMAMG00000012144) ENSMAMG00000012116 Carangaria ANCESTRAL SPECIES 7 ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00940000154386 ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00940000180153 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b Carangaria_A ANCESTRAL SPECIES 3 ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00980000199212 ENSGT00940000154386 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00940000180153 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b ENSGT00390000004798 Seriola ANCESTRAL SPECIES ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00980000199212 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT01060000252104 ENSGT00940000180153 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b ENSGT00390000004798 Greater amberjack MODERN SPECIES aspm (ENSSDUG00000017053) depdc1a (ENSSDUG00000017031) rpe65b (ENSSDUG00000016938) si:ch211-198n5.11 (ENSSDUG00000016890) fnbp1l (ENSSDUG00000016812) ENSSDUG00000016801 bcar3 (ENSSDUG00000016748) hps3 (ENSSDUG00000016706) ENSSDUG00000016687 ttc14 (ENSSDUG00000016642) #20 ENSSDUG00000016630 fxr1 (ENSSDUG00000016557) #22 dnajc19 (ENSSDUG00000016541) #23 sox2 (ENSSDUG00000016532) #24 ATP11B (ENSSDUG00000016508) #25 mccc1 (ENSSDUG00000016424) #27 ENSSDUG00000016401 ENSSDUG00000016284 PIK3CA (ENSSDUG00000016208) ##10 ZMAT3 (ENSSDUG00000016188) #9 ENSSDUG00000016156 ENSSDUG00000016127 stxbp3 (ENSSDUG00000016067) ENSSDUG00000016050 ENSSDUG00000015941 henmt1 (ENSSDUG00000015914) fam102bb (ENSSDUG00000015867) Yellowtail amberjack MODERN SPECIES 3176 uchl5 (ENSSLDG00000017814) glrx2 (ENSSLDG00000017890) b3galt2 (ENSSLDG00000017900) cfhl1 (ENSSLDG00000017908) ENSSLDG00000017934 ENSSLDG00000017953 aspm (ENSSLDG00000017974) depdc1a (ENSSLDG00000018016) rpe65b (ENSSLDG00000018072) si:ch211-198n5.11 (ENSSLDG00000018130) fnbp1l (ENSSLDG00000018163) bcar3 (ENSSLDG00000018222) hps3 (ENSSLDG00000018261) ENSSLDG00000018350 ENSSLDG00000018364 fxr1 (ENSSLDG00000018386) #22 dnajc19 (ENSSLDG00000018409) #23 sox2 (ENSSLDG00000018420) #24 ATP11B (ENSSLDG00000018445) #25 mccc1 (ENSSLDG00000018498) #27 ENSSLDG00000018523 ENSSLDG00000018538 PIK3CA (ENSSLDG00000018558) ##10 ENSSLDG00000018593 ##10 ENSSLDG00000018611 #9 ENSSLDG00000018641 ENSSLDG00000018661 stxbp3 (ENSSLDG00000018702) FNDC7 (ENSSLDG00000018747) ENSSLDG00000018774 ENSSLDG00000018793 Barramundi perch MODERN SPECIES 388 ENSLCAG00010002617 #20 fxr1 (ENSLCAG00010002622) #22 dnajc19 (ENSLCAG00010002626) #23 sox2 (ENSLCAG00010002633) #24 ATP11B (ENSLCAG00010002723) #25 Pleuronectoidei ANCESTRAL SPECIES 20 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154386 ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00940000169190 ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a Tongue sole MODERN SPECIES 11 glrx2 (ENSCSEG00000001831) b3galt2 (ENSCSEG00000001829) cfh (ENSCSEG00000001810) ENSCSEG00000001805 aspm (ENSCSEG00000001749) ENSCSEG00000001739 depdc1a (ENSCSEG00000001736) rpe65b (ENSCSEG00000001723) si:ch211-198n5.11 (ENSCSEG00000001712) fnbp1l (ENSCSEG00000001689) bcar3 (ENSCSEG00000001676) hps3 (ENSCSEG00000001648) ttc14 (ENSCSEG00000001645) #20 ENSCSEG00000001642 dnajc19 (ENSCSEG00000001630) #23 fxr1 (ENSCSEG00000001597) #22 sox2 (ENSCSEG00000001590) #24 ATP11B (ENSCSEG00000001572) #25 ENSCSEG00000001563 ENSCSEG00000001559 PATJ (ENSCSEG00000001551) tm2d1 (ENSCSEG00000001546) nfia (ENSCSEG00000001541) frem1b (ENSCSEG00000001512) SAMD9 (ENSCSEG00000001506) ttll9 (ENSCSEG00000001500) nrd1b (ENSCSEG00000001310) RAB3B (ENSCSEG00000001290) ENSCSEG00000001287 ENSCSEG00000001281 orc1 (ENSCSEG00000001275) Turbot MODERN SPECIES 3 b3galt2 (ENSSMAG00000018609) ENSSMAG00000034768 ENSSMAG00000018628 ENSSMAG00000026125 aspm (ENSSMAG00000018889) depdc1a (ENSSMAG00000019006) ENSSMAG00000019019 ENSSMAG00000022429 si:ch211-198n5.11 (ENSSMAG00000019050) ENSSMAG00000019085 ENSSMAG00000019102 ENSSMAG00000019148 ENSSMAG00000019215 ENSSMAG00000023012 ttc14 (ENSSMAG00000019224) #20 fxr1 (ENSSMAG00000019240) #22 dnajc19 (ENSSMAG00000019301) #23 sox2 (ENSSMAG00000019309) #24 ENSSMAG00000019337 ENSSMAG00000027499 ENSSMAG00000035807 ENSSMAG00000019363 ENSSMAG00000019381 stxbp3 (ENSSMAG00000019435) ENSSMAG00000019460 ENSSMAG00000023351 ENSSMAG00000037924 ENSSMAG00000019534 ENSSMAG00000019540 #9 ENSSMAG00000019551 ##10 kng1 (ENSSMAG00000019641) Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000157064.a.b.a Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.a ENSGT00940000157064.a.b.b.a.a Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.a ENSGT00940000157064.a.b.b.a.a Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00940000178727 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.a ENSGT00940000157064.a.b.b.a.a Mangrove rivulus MODERN SPECIES 356 ttc14 (ENSKMAG00000004657) #20 fxr1 (ENSKMAG00000004687) #22 dnajc19 (ENSKMAG00000004753) #23 ENSKMAG00000004775 sox2 (ENSKMAG00000004796) #24 ATP11B (ENSKMAG00000004892) #25 Turquoise killifish MODERN SPECIES 1626 UCHL5 (ENSNFUG00015009918) GLRX2 (ENSNFUG00015009999) B3GALT2 (ENSNFUG00015010014) ENSNFUG00015010019 ENSNFUG00015014048 aspm (ENSNFUG00015014069) ENSNFUG00015014218 ENSNFUG00015014225 ENSNFUG00015014233 depdc1a (ENSNFUG00015014246) rpe65b (ENSNFUG00015014334) Nfu_g_1_002367 (ENSNFUG00015014722) fnbp1l (ENSNFUG00015014883) BCAR3 (ENSNFUG00015015037) hps3 (ENSNFUG00015015133) fxr1 (ENSNFUG00015015365) #22 DNAJC19 (ENSNFUG00015017077) #23 ENSNFUG00015017098 ENSNFUG00015017106 ATP11B (ENSNFUG00015017152) #25 MCCC1 (ENSNFUG00015017726) #27 ENSNFUG00015019482 ENSNFUG00015019487 KNG1 (ENSNFUG00015019491) PIK3CA (ENSNFUG00015019503) ##10 BX548160.2 (ENSNFUG00015019542) #9 ENSNFUG00015019547 ENSNFUG00015019556 ENSNFUG00015019560 ENSNFUG00015019565 STXBP3 (ENSNFUG00015019624) Cyprinodontoidei ANCESTRAL SPECIES 29 ENSGT00940000166148 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00940000173859 ENSGT01050000244902.a.a.a.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h Poeciliinae ANCESTRAL SPECIES 7 ENSGT00940000156988 ENSGT00940000166148 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00940000173859 ENSGT01050000244902.a.a.a.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h Poecilia ANCESTRAL SPECIES 1 ENSGT00940000156988 ENSGT00940000166148 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00940000173859 ENSGT01050000244902.a.a.a.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a.e ENSGT00390000004798 ENSGT00940000156132.h NAME_6 ANCESTRAL SPECIES 387 ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 Amazon molly MODERN SPECIES 903 ttc14 (ENSPFOG00000014621) #20 fxr1 (ENSPFOG00000014691) #22 dnajc19 (ENSPFOG00000014794) #23 Sailfin molly MODERN SPECIES 828 bcar3 (ENSPLAG00000000491) hps3 (ENSPLAG00000023295) ENSPLAG00000023278 ttc14 (ENSPLAG00000023263) #20 fxr1 (ENSPLAG00000023193) #22 dnajc19 (ENSPLAG00000023178) #23 Guppy MODERN SPECIES 456 ENSPREG00000000633 ENSPREG00000000596 comp (ENSPREG00000000551) tmem38a (ENSPREG00000000545) smim7 (ENSPREG00000000542) ENSPREG00000022870 ENSPREG00000022865 aspm (ENSPREG00000022836) depdc1a (ENSPREG00000022815) rpe65b (ENSPREG00000022806) si:ch211-198n5.11 (ENSPREG00000022798) fnbp1l (ENSPREG00000022786) bcar3 (ENSPREG00000022769) hps3 (ENSPREG00000022756) ttc14 (ENSPREG00000022747) #20 fxr1 (ENSPREG00000022738) #22 dnajc19 (ENSPREG00000022727) #23 sox2 (ENSPREG00000022723) #24 ATP11B (ENSPREG00000022699) #25 mccc1 (ENSPREG00000022680) #27 ENSPREG00000022675 ENSPREG00000022657 ENSPREG00000022643 ##10 ENSPREG00000022632 #9 ENSPREG00000022616 stxbp3 (ENSPREG00000022601) ENSPREG00000022590 ENSPREG00000022583 ENSPREG00000022577 ENSPREG00000022570 henmt1 (ENSPREG00000022562) Platyfish MODERN SPECIES 23 EPS15L1 (ENSXMAG00000021226) DDX10 (ENSXMAG00000016515) ENSXMAG00000012631 SZT2 (ENSXMAG00000028752) ENSXMAG00000029261 ENSXMAG00000026966 aspm (ENSXMAG00000000723) depdc1a (ENSXMAG00000000720) rpe65b (ENSXMAG00000000719) si:ch211-198n5.11 (ENSXMAG00000000716) fnbp1l (ENSXMAG00000000711) bcar3 (ENSXMAG00000000707) hps3 (ENSXMAG00000000688) ENSXMAG00000025704 ttc14 (ENSXMAG00000016060) #20 fxr1 (ENSXMAG00000000666) #22 dnajc19 (ENSXMAG00000000660) #23 sox2 (ENSXMAG00000020128) #24 ATP11B (ENSXMAG00000000614) #25 mccc1 (ENSXMAG00000000611) #27 ENSXMAG00000000609 PIK3CA (ENSXMAG00000000586) ##10 ENSXMAG00000015188 #9 ENSXMAG00000002519 ENSXMAG00000000582 stxbp3 (ENSXMAG00000000568) ENSXMAG00000000562 ENSXMAG00000000559 henmt1 (ENSXMAG00000000555) fam102bb (ENSXMAG00000000553) slc25a24 (ENSXMAG00000000548) NAME_4 ANCESTRAL SPECIES 62 ENSGT00940000166148 ENSGT00390000018845.f ENSGT00390000014626 ENSGT00530000063460.B ENSGT01050000244902.a.a.a.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000157064.a.b.a ENSGT00940000157064.a.b.b.a.a Mummichog DUPLICATION Mummichog MODERN SPECIES 2395 ttc14 (ENSFHEG00000003862) #20 ENSFHEG00000003734 #22 fxr1 (ENSFHEG00000003714) #22 dnajc19 (ENSFHEG00000003702) #23 sox2 (ENSFHEG00000003675) #24 ATP11B (ENSFHEG00000003653) #25 mccc1 (ENSFHEG00000003581) #27 ENSFHEG00000003270 ENSFHEG00000003260 PIK3CA (ENSFHEG00000003251) ##10 ZMAT3 (ENSFHEG00000003221) #9 ENSFHEG00000003207 ENSFHEG00000003197 stxbp3 (ENSFHEG00000003185) ENSFHEG00000003177 ENSFHEG00000003168 ENSFHEG00000003159 ENSFHEG00000003137 Mummichog MODERN SPECIES 2395 ttc14 (ENSFHEG00000003862) #20 ENSFHEG00000003734 #22 fxr1 (ENSFHEG00000003714) #22 dnajc19 (ENSFHEG00000003702) #23 sox2 (ENSFHEG00000003675) #24 ATP11B (ENSFHEG00000003653) #25 mccc1 (ENSFHEG00000003581) #27 ENSFHEG00000003270 ENSFHEG00000003260 PIK3CA (ENSFHEG00000003251) ##10 ZMAT3 (ENSFHEG00000003221) #9 ENSFHEG00000003207 ENSFHEG00000003197 stxbp3 (ENSFHEG00000003185) ENSFHEG00000003177 ENSFHEG00000003168 ENSFHEG00000003159 Sheepshead minnow MODERN SPECIES 681 hps3 (ENSCVAG00000002673) ttc14 (ENSCVAG00000002680) #20 fxr1 (ENSCVAG00000000711) #22 dnajc19 (ENSCVAG00000002724) #23 sox2 (ENSCVAG00000002728) #24 Oryzias ANCESTRAL SPECIES 5 ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00940000169190 ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 Oryzias_b ANCESTRAL SPECIES 15 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT01050000245029.a ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00940000169190 ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 Javanese ricefish MODERN SPECIES 18 ENSOJAG00000006195 ENSOJAG00000006135 ENSOJAG00000006126 ENSOJAG00000006115 ENSOJAG00000006049 ENSOJAG00000006019 aspm (ENSOJAG00000005674) depdc1a (ENSOJAG00000005643) rpe65b (ENSOJAG00000004462) si:ch211-198n5.11 (ENSOJAG00000004102) fnbp1l (ENSOJAG00000003974) bcar3 (ENSOJAG00000003879) hps3 (ENSOJAG00000003815) ENSOJAG00000003787 ttc14 (ENSOJAG00000022381) #20 fxr1 (ENSOJAG00000022030) #22 dnajc19 (ENSOJAG00000021937) #23 ENSOJAG00000021914 ATP11B (ENSOJAG00000021737) #25 mccc1 (ENSOJAG00000021188) #27 ENSOJAG00000021150 kng1 (ENSOJAG00000021146) PIK3CA (ENSOJAG00000021116) ##10 ENSOJAG00000021109 #9 ENSOJAG00000021105 ENSOJAG00000021089 stxbp3 (ENSOJAG00000020548) FNDC7 (ENSOJAG00000020494) ENSOJAG00000020464 ENSOJAG00000020449 henmt1 (ENSOJAG00000020437) Indian medaka MODERN SPECIES 13 ENSOMEG00000012759 ENSOMEG00000012738 ENSOMEG00000012689 ENSOMEG00000012650 ENSOMEG00000012637 aspm (ENSOMEG00000012594) depdc1a (ENSOMEG00000012533) rpe65b (ENSOMEG00000012468) si:ch211-198n5.11 (ENSOMEG00000012358) fnbp1l (ENSOMEG00000012284) bcar3 (ENSOMEG00000012147) gnb5a (ENSOMEG00000011983) ##14 hps3 (ENSOMEG00000011957) ENSOMEG00000011872 ttc14 (ENSOMEG00000011795) #20 fxr1 (ENSOMEG00000011753) #22 dnajc19 (ENSOMEG00000011655) #23 sox2 (ENSOMEG00000011636) #24 ATP11B (ENSOMEG00000011605) #25 mccc1 (ENSOMEG00000011470) #27 ENSOMEG00000011439 kng1 (ENSOMEG00000011412) PIK3CA (ENSOMEG00000011383) ##10 ENSOMEG00000011303 #9 ENSOMEG00000011259 ENSOMEG00000011225 ENSOMEG00000011198 stxbp3 (ENSOMEG00000011180) FNDC7 (ENSOMEG00000011142) ENSOMEG00000011097 ENSOMEG00000011070 Oryzias_a ANCESTRAL SPECIES 14 ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT01100000264681 ENSGT00390000013701.w #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00940000169190 ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h Japanese Medaka HdrR MODERN SPECIES 18 uchl5 (ENSORLG00000012257) glrx2 (ENSORLG00000012223) ENSORLG00000025926 b3galt2 (ENSORLG00000025428) ENSORLG00000027370 aspm (ENSORLG00000012201) depdc1a (ENSORLG00000012180) rpe65b (ENSORLG00000012125) si:ch211-198n5.11 (ENSORLG00000012062) fnbp1l (ENSORLG00000012037) bcar3 (ENSORLG00000011935) hps3 (ENSORLG00000011881) ENSORLG00000011842 ENSORLG00000029868 ttc14 (ENSORLG00000011825) #20 fxr1 (ENSORLG00000011787) #22 dnajc19 (ENSORLG00000026035) #23 ENSORLG00000023151 sox2 (ENSORLG00000011685) #24 ATP11B (ENSORLG00000025942) #25 mccc1 (ENSORLG00000011678) #27 ENSORLG00000025358 kng1 (ENSORLG00000011656) PIK3CA (ENSORLG00000011644) ##10 ENSORLG00000011575 #9 ENSORLG00000011566 ENSORLG00000011540 stxbp3 (ENSORLG00000011502) ENSORLG00000011405 ENSORLG00000029557 ENSORLG00000028575 Chinese medaka MODERN SPECIES 971 depdc1a (ENSOSIG00000012743) rpe65c (ENSOSIG00000012754) fnbp1l (ENSOSIG00000012760) bcar3 (ENSOSIG00000012792) hps3 (ENSOSIG00000012897) ENSOSIG00000013092 ENSOSIG00000013093 fxr1 (ENSOSIG00000013100) #22 dnajc19 (ENSOSIG00000015190) #23 ENSOSIG00000015197 ATP11B (ENSOSIG00000015204) #25 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000154967.b.b.a ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b Pomacentridae ANCESTRAL SPECIES 16 ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a ENSGT01050000244823.d.b.b.b Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000157316.f ENSGT00940000158520.e.b ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000179565 ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a Amphiprion ANCESTRAL SPECIES 2 ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00940000169190 ENSGT00940000155531.a.a ##10 ENSGT00730000111202 #9 ENSGT00940000154507.t ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000179565 ENSGT00980000198596.B ENSGT00940000157064.a.b.b.a.a Orange clownfish MODERN SPECIES 11 ENSAPEG00000016090 depdc1a (ENSAPEG00000015954) rpe65c (ENSAPEG00000015903) ENSAPEG00000015890 ENSAPEG00000015867 ENSAPEG00000015825 ENSAPEG00000015712 ENSAPEG00000015659 ENSAPEG00000015646 si:ch211-198n5.11 (ENSAPEG00000015606) fnbp1l (ENSAPEG00000015551) bcar3 (ENSAPEG00000015457) ENSAPEG00000015442 hps3 (ENSAPEG00000015313) ttc14 (ENSAPEG00000015072) #20 fxr1 (ENSAPEG00000014981) #22 dnajc19 (ENSAPEG00000014945) #23 sox2 (ENSAPEG00000014838) #24 ATP11B (ENSAPEG00000014737) #25 mccc1 (ENSAPEG00000014712) #27 ENSAPEG00000014683 kng1 (ENSAPEG00000014666) PIK3CA (ENSAPEG00000014601) ##10 ENSAPEG00000014580 ##10 ZMAT3 (ENSAPEG00000014553) #9 ENSAPEG00000014504 ENSAPEG00000014456 stxbp3 (ENSAPEG00000014381) ENSAPEG00000014335 ENSAPEG00000014318 ENSAPEG00000014292 Clown anemonefish MODERN SPECIES 1121 LPAR2 (ENSAOCG00000022406) ENSAOCG00000022393 akap8l (ENSAOCG00000022319) hps3 (ENSAOCG00000022280) ENSAOCG00000022253 ttc14 (ENSAOCG00000022230) #20 fxr1 (ENSAOCG00000022178) #22 dnajc19 (ENSAOCG00000022106) #23 Spiny chromis MODERN SPECIES 309 si:ch211-198n5.11 (ENSAPOG00000017317) fnbp1l (ENSAPOG00000017182) bcar3 (ENSAPOG00000017119) hps3 (ENSAPOG00000017102) ttc14 (ENSAPOG00000017067) #20 fxr1 (ENSAPOG00000017058) #22 dnajc19 (ENSAPOG00000016978) #23 ENSAPOG00000016952 CRACR2A (ENSAPOG00000016936) PRMT8 (ENSAPOG00000016867) TSPAN9 (ENSAPOG00000016806) tspan33b (ENSAPOG00000016771) ttc38 (ENSAPOG00000016759) mical3a (ENSAPOG00000016720) Bicolor damselfish MODERN SPECIES 589 fnbp1l (ENSSPAG00000010845) bcar3 (ENSSPAG00000010816) hps3 (ENSSPAG00000010730) ttc14 (ENSSPAG00000010662) #20 fxr1 (ENSSPAG00000010538) #22 dnajc19 (ENSSPAG00000010504) #23 sox2 (ENSSPAG00000010494) #24 Cichlidae ANCESTRAL SPECIES 42 ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000164897.a.b.b ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT01000000216191 ENSGT00460000041630 ENSGT00940000154507.t ENSGT00730000111202 #9 ENSGT00940000155531.a.a ##10 ENSGT00950000182930.B Pseudocrenilabrinae ANCESTRAL SPECIES 23 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000174597 ENSGT00940000154967.a.b.a.b.`b.b ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000154967.b.b.a ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000164897.a.b.b ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00460000041630 ENSGT00940000154507.t.d ENSGT00730000111202 #9 ENSGT00940000155531.a.a ##10 ENSGT00950000182930.B ENSGT00940000154507.t.c ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B Nile tilapia MODERN SPECIES 8 f2r (ENSONIG00000016111) depdc1a (ENSONIG00000003784) rpe65b (ENSONIG00000003773) si:ch211-198n5.11 (ENSONIG00000003770) fnbp1l (ENSONIG00000003764) bcar3 (ENSONIG00000003760) hps3 (ENSONIG00000003752) ENSONIG00000027731 b3gat1a (ENSONIG00000003750) ENSONIG00000035489 ENSONIG00000041410 ENSONIG00000029705 ENSONIG00000029296 ttc14 (ENSONIG00000003747) #20 ENSONIG00000032390 fxr1 (ENSONIG00000003740) #22 dnajc19 (ENSONIG00000027409) #23 sox2 (ENSONIG00000039405) #24 ENSONIG00000021316 ATP11B (ENSONIG00000003733) #25 ENSONIG00000028245 ENSONIG00000015024 mccc1 (ENSONIG00000008395) #27 ENSONIG00000037606 ENSONIG00000008390 ENSONIG00000027371 ENSONIG00000008388 #9 PIK3CA (ENSONIG00000008379) ##10 ENSONIG00000008378 ENSONIG00000041522 stxbp3 (ENSONIG00000008368) Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a.l ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000154967.b.b.a.k ENSGT00940000174597 ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.b ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000164897.a.b.b ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00460000041630 ENSGT00940000154507.t.d ENSGT00730000111202 #9 ENSGT00940000155531.a.a ##10 ENSGT00950000182930.B ENSGT00940000154507.t.c ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B Haplochromini ANCESTRAL SPECIES 9 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a.k ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000154967.b.b.a.l ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458.i ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000164897.a.b.b ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00460000041630 ENSGT00940000154507.t.d ENSGT00730000111202 #9 ENSGT00940000155531.a.a ##10 ENSGT00950000182930.B ENSGT00940000154507.t.c ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a.k ENSGT00940000154386 ENSGT00940000154967.b.b.b ENSGT00940000154967.b.b.a.l ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458.i ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000164897.a.b.b ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00460000041630 ENSGT00940000154507.t.d ENSGT00730000111202 #9 ENSGT00940000155531.a.a ##10 ENSGT00950000182930.B ENSGT00940000154507.t.c ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00980000198596.B Haplochromini_B ANCESTRAL SPECIES 32 ENSGT00940000157937.b.d ENSGT00940000155195 ENSGT00940000164211 ENSGT00940000155117.f.a ENSGT00940000154967.b.b.a.k.b ENSGT00940000174597 ENSGT00560000077332 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00390000015458.i ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00530000064692.B.b.a.d.a.a.a.b ENSGT00940000164897.a.b.b ENSGT00940000156162.C #25 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00460000041630 ENSGT00940000154507.t.d ENSGT00730000111202 #9 ENSGT00940000155531.a.a ##10 ENSGT00950000182930.B ENSGT00940000154507.t.c ENSGT00940000157607 ENSGT00390000004674.i.b Eastern happy MODERN SPECIES 8 ENSACLG00000025338 ENSACLG00000025359 ENSACLG00000025380 ENSACLG00000025388 ENSACLG00000025399 aspm (ENSACLG00000025411) depdc1a (ENSACLG00000025455) rpe65b (ENSACLG00000025478) si:ch211-198n5.11 (ENSACLG00000025517) fnbp1l (ENSACLG00000025531) bcar3 (ENSACLG00000025641) hps3 (ENSACLG00000025702) ENSACLG00000025760 ENSACLG00000025775 ttc14 (ENSACLG00000025782) #20 fxr1 (ENSACLG00000025812) #22 dnajc19 (ENSACLG00000025865) #23 sox2 (ENSACLG00000025897) #24 ENSACLG00000025903 ENSACLG00000025904 ENSACLG00000025909 ENSACLG00000025947 ENSACLG00000025953 ATP11B (ENSACLG00000025964) #25 mccc1 (ENSACLG00000026110) #27 ENSACLG00000026175 ENSACLG00000026193 ENSACLG00000026226 ENSACLG00000026272 #9 PIK3CA (ENSACLG00000026297) ##10 ENSACLG00000026340 Zebra mbuna MODERN SPECIES 1099 ENSMZEG00005015868 ENSMZEG00005015861 ENSMZEG00005015847 ENSMZEG00005015831 ENSMZEG00005015828 brinp3a.2 (ENSMZEG00005015813) ENSMZEG00005015791 ENSMZEG00005015783 RGS13 (ENSMZEG00005015776) ENSMZEG00005015771 uchl5 (ENSMZEG00005015751) glrx2 (ENSMZEG00005015746) b3galt2 (ENSMZEG00005015744) hps3 (ENSMZEG00005015725) ttc14 (ENSMZEG00005015709) #20 fxr1 (ENSMZEG00005015679) #22 dnajc19 (ENSMZEG00005015660) #23 sox2 (ENSMZEG00005015644) #24 ENSMZEG00005015637 ENSMZEG00005015589 ATP11B (ENSMZEG00005015554) #25 mccc1 (ENSMZEG00005015532) #27 ENSMZEG00005015524 ENSMZEG00005015477 ENSMZEG00005015451 ENSMZEG00005015427 #9 PIK3CA (ENSMZEG00005015395) ##10 lrp8 (ENSMZEG00005015380) slc26a5 (ENSMZEG00005015362) ENSMZEG00005015351 tmed9 (ENSMZEG00005015327) P. nyererei MODERN SPECIES 367 ttc14 (ENSPNYG00000014013) #20 fxr1 (ENSPNYG00000014047) #22 dnajc19 (ENSPNYG00000014103) #23 sox2 (ENSPNYG00000014128) #24 ENSPNYG00000014137 ATP11B (ENSPNYG00000014182) #25 ENSPNYG00000014255 #27 ENSPNYG00000014271 ENSPNYG00000014294 ENSPNYG00000014339 ZMAT3 (ENSPNYG00000014350) #9 PIK3CA (ENSPNYG00000014370) ##10 ENSPNYG00000014435 ENSPNYG00000014452 stxbp3 (ENSPNYG00000014469) FNDC7 (ENSPNYG00000014503) ENSPNYG00000014551 Burton s mouthbrooder MODERN SPECIES 329 ttc14 (ENSHBUG00000004981) #20 fxr1 (ENSHBUG00000004901) #22 dnajc19 (ENSHBUG00000004787) #23 sox2 (ENSHBUG00000004735) #24 ENSHBUG00000000117 ATP11B (ENSHBUG00000004693) #25 mccc1 (ENSHBUG00000000956) #27 ENSHBUG00000004546 ENSHBUG00000004522 ENSHBUG00000004414 ENSHBUG00000004401 #9 PIK3CA (ENSHBUG00000004357) ##10 ENSHBUG00000004293 ENSHBUG00000004261 stxbp3 (ENSHBUG00000004244) FNDC7 (ENSHBUG00000004176) ENSHBUG00000004146 Lyretail cichlid MODERN SPECIES 343 ENSNBRG00000021710 b3galt2 (ENSNBRG00000021706) ENSNBRG00000021698 ENSNBRG00000021687 ENSNBRG00000021666 ENSNBRG00000021649 NXPE3 (ENSNBRG00000021635) ENSNBRG00000021574 depdc1a (ENSNBRG00000021479) rpe65b (ENSNBRG00000021436) si:ch211-198n5.11 (ENSNBRG00000021401) fnbp1l (ENSNBRG00000021354) bcar3 (ENSNBRG00000021258) hps3 (ENSNBRG00000021182) ttc14 (ENSNBRG00000021095) #20 fxr1 (ENSNBRG00000021072) #22 dnajc19 (ENSNBRG00000021053) #23 sox2 (ENSNBRG00000021046) #24 ENSNBRG00000021036 ENSNBRG00000021026 ATP11B (ENSNBRG00000020967) #25 ENSNBRG00000020946 ENSNBRG00000020924 ENSNBRG00000020902 ZMAT3 (ENSNBRG00000020886) #9 ENSNBRG00000020876 ##10 PIK3CA (ENSNBRG00000020832) ##10 ENSNBRG00000020823 stxbp3 (ENSNBRG00000020763) FNDC7 (ENSNBRG00000020687) ENSNBRG00000020673 Midas cichlid MODERN SPECIES 487 ENSACIG00000023496 ENSACIG00000023493 aspm (ENSACIG00000023479) depdc1a (ENSACIG00000023461) rpe65c (ENSACIG00000023446) si:ch211-198n5.11 (ENSACIG00000023426) fnbp1l (ENSACIG00000023410) bcar3 (ENSACIG00000023397) cd248a (ENSACIG00000023389) hps3 (ENSACIG00000023368) ttc14 (ENSACIG00000023360) #20 fxr1 (ENSACIG00000023354) #22 dnajc19 (ENSACIG00000023350) #23 sox2 (ENSACIG00000023348) #24 ENSACIG00000023342 ATP11B (ENSACIG00000023329) #25 mccc1 (ENSACIG00000023146) #27 ENSACIG00000023097 ENSACIG00000023068 PIK3CA (ENSACIG00000023052) ##10 ZMAT3 (ENSACIG00000023037) #9 ENSACIG00000023030 stxbp3 (ENSACIG00000022914) ENSACIG00000022889 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 104 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00950000183189.a.b.a.k #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156968.p ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 ENSGT00510000047658 ENSGT00510000048142 Salmoninae ANCESTRAL SPECIES 115 ENSGT00940000160141.e.b.a ENSGT00390000013701.t #20 ENSGT00950000183189.a.b.a.k #22 ENSGT00940000154384 #23 ENSGT00940000160614.i #24 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000165232.h ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a Salmoninae_a ANCESTRAL SPECIES 22 ENSGT00940000154973.a.b.a ENSGT00390000013989.a.n ENSGT00940000158159.d ENSGT00390000016356 ENSGT00390000017679 ENSGT00950000182988.a.a.b.i ENSGT00390000003020.d ENSGT00530000063816.d.m ENSGT01050000244955.b.c.c ENSGT01050000244897.a.a.b.b.a ENSGT00460000041630 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00390000013701.t #20 ENSGT00950000183189.a.b.a.k #22 ENSGT00940000154384 #23 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000165232.h ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ENSGT00390000001724.l.a.b Salmo ANCESTRAL SPECIES 14 ENSGT00940000154973.a.b.a ENSGT00390000013989.a.n ENSGT00940000158159.d ENSGT00390000016356 ENSGT00390000017679 ENSGT00950000182988.a.a.b.i ENSGT00390000003020.d ENSGT00530000063816.d.m ENSGT01050000244955.b.c.c ENSGT01050000244897.a.a.b.b.a ENSGT00460000041630 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00390000013701.t #20 ENSGT00950000183189.a.b.a.k #22 ENSGT00940000154384 #23 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000165232.h ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ENSGT00390000001724.l.b.b Atlantic salmon MODERN SPECIES 1 ing5a (ENSSSAG00000093309) cep19 (ENSSSAG00000118536) pigx (ENSSSAG00000041234) pak2b (ENSSSAG00000041277) ENSSSAG00000099543 rpp21 (ENSSSAG00000043838) ENSSSAG00000102904 gpc5b (ENSSSAG00000103799) gpc1a (ENSSSAG00000043895) ankmy1 (ENSSSAG00000044230) ENSSSAG00000044376 ENSSSAG00000114736 ENSSSAG00000051282 ENSSSAG00000051296 #20 ENSSSAG00000105616 ENSSSAG00000051511 #22 ENSSSAG00000120735 ENSSSAG00000082201 lrrc2 (ENSSSAG00000060461) LRRC7 (ENSSSAG00000060780) DEPDC1 (ENSSSAG00000061391) ENSSSAG00000062538 RPE65 (ENSSSAG00000112197) fnbp1l (ENSSSAG00000062755) bcar3 (ENSSSAG00000063319) zgc:171480 (ENSSSAG00000063345) slc5a9 (ENSSSAG00000063359) gsh0 (ENSSSAG00000063809) ENSSSAG00000087728 ENSSSAG00000063813 spata6 (ENSSSAG00000106644) River trout MODERN SPECIES 14 plekhb2 (ENSSTUG00000045574) ing5a (ENSSTUG00000045587) cep19 (ENSSTUG00000035252) pigx (ENSSTUG00000035258) pak2b (ENSSTUG00000035291) ENSSTUG00000035783 rpp21 (ENSSTUG00000035790) aqp12 (ENSSTUG00000035798) gpc5b (ENSSTUG00000035807) gpc1a (ENSSTUG00000035823) ENSSTUG00000035958 EPHB1 (ENSSTUG00000036005) ENSSTUG00000037051 LRRC24 (ENSSTUG00000037062) ttc14 (ENSSTUG00000037083) #20 fxr1 (ENSSTUG00000037446) #22 dnajc19 (ENSSTUG00000039802) #23 ENSSTUG00000039840 lrrc40 (ENSSTUG00000039866) ENSSTUG00000039939 ENSSTUG00000039945 LRRC7 (ENSSTUG00000040027) depdc1a (ENSSTUG00000040140) RPE65 (ENSSTUG00000040173) si:ch211-198n5.11 (ENSSTUG00000040753) fnbp1l (ENSSTUG00000040947) bcar3 (ENSSTUG00000041017) zgc:171480 (ENSSTUG00000041056) slc5a9 (ENSSTUG00000041092) gclm (ENSSTUG00000041215) ENSSTUG00000041234 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00390000013989.a.n ENSGT00940000158159.d ENSGT00390000016356 ENSGT00390000017679 ENSGT00950000182988.a.a.b.i ENSGT00390000003020.d ENSGT00530000063816.d.m ENSGT01050000244955.b.c.c ENSGT01050000244897.a.a.b.b.a ENSGT00460000041630 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00950000183189.a.b.a.k.b.b #22 ENSGT00940000154384 #23 ENSGT00950000183189.a.b.a.k.a #22 ENSGT00940000156968.o ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ENSGT00390000001724.l.a.b ENSGT00940000155042.a.a.f ENSGT00940000157399.a ENSGT00940000161649.f Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000158159.d ENSGT00390000016356 ENSGT00390000017679 ENSGT00950000182988.a.a.b.i ENSGT00390000003020.d ENSGT00530000063816.d.m ENSGT01050000244955.b.c.c ENSGT01050000244897.a.a.b.b.a ENSGT00460000041630 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00940000180153 ENSGT00950000183189.a.b.a.k.b.a #22 ENSGT00940000154384 #23 ENSGT00950000183189.a.b.a.k.a #22 ENSGT00940000156968.o ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ENSGT00390000001724.l.a.b ENSGT00940000155042.a.a.f ENSGT00940000157399.a ENSGT00940000161649.f Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 29 ENSOTSG00005031319 ssbp4 (ENSOTSG00005031318) fkbp8 (ENSOTSG00005031304) ell (ENSOTSG00005031283) DOT1L (ENSOTSG00005031276) amh (ENSOTSG00005031275) oaz1a (ENSOTSG00005031272) org (ENSOTSG00005031270) lingo3a (ENSOTSG00005031269) nfil3-4 (ENSOTSG00005031267) ENSOTSG00005031265 lrrc40 (ENSOTSG00005031078) sox2 (ENSOTSG00005031077) #24 fxr1 (ENSOTSG00005031076) #22 dnajc19 (ENSOTSG00005031074) #23 fxr1 (ENSOTSG00005031073) #22 ttc14 (ENSOTSG00005031072) #20 LRRC24 (ENSOTSG00005031071) ENSOTSG00005031070 ENSOTSG00005031069 ENSOTSG00005031068 gpc1a (ENSOTSG00005031065) ENSOTSG00005031062 gpc5b (ENSOTSG00005031061) aqp12 (ENSOTSG00005031060) rpp21 (ENSOTSG00005031059) ENSOTSG00005030643 ENSOTSG00005030636 ankrd29 (ENSOTSG00005030632) ENSOTSG00005030525 plekhb2 (ENSOTSG00005030518) Chinook salmon MODERN SPECIES 29 RPE65 (ENSOTSG00005031467) depdc1a (ENSOTSG00005031320) ENSOTSG00005031319 ssbp4 (ENSOTSG00005031318) fkbp8 (ENSOTSG00005031304) ell (ENSOTSG00005031283) DOT1L (ENSOTSG00005031276) amh (ENSOTSG00005031275) oaz1a (ENSOTSG00005031272) org (ENSOTSG00005031270) lingo3a (ENSOTSG00005031269) nfil3-4 (ENSOTSG00005031267) ENSOTSG00005031265 lrrc40 (ENSOTSG00005031078) sox2 (ENSOTSG00005031077) #24 fxr1 (ENSOTSG00005031076) #22 dnajc19 (ENSOTSG00005031074) #23 fxr1 (ENSOTSG00005031073) #22 ttc14 (ENSOTSG00005031072) #20 LRRC24 (ENSOTSG00005031071) ENSOTSG00005031070 ENSOTSG00005031069 ENSOTSG00005031068 gpc1a (ENSOTSG00005031065) ENSOTSG00005031062 gpc5b (ENSOTSG00005031061) aqp12 (ENSOTSG00005031060) rpp21 (ENSOTSG00005031059) ENSOTSG00005030643 ENSOTSG00005030636 ankrd29 (ENSOTSG00005030632) Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 636 ENSGT00940000180153 ENSGT00950000183189.a.b.a.k.b.a #22 Rainbow trout MODERN SPECIES 26 ing5a (ENSOMYG00000012904) cep19 (ENSOMYG00000012916) pigx (ENSOMYG00000077222) pak2b (ENSOMYG00000013013) ENSOMYG00000052220 ENSOMYG00000013685 gpc5b (ENSOMYG00000013692) ENSOMYG00000068930 gpc1a (ENSOMYG00000013713) ENSOMYG00000013782 ENSOMYG00000013852 ENSOMYG00000014127 ENSOMYG00000075544 ENSOMYG00000059700 ENSOMYG00000062422 ENSOMYG00000014274 #22 ENSOMYG00000015299 #23 LRRC40 (ENSOMYG00000015333) LRRC7 (ENSOMYG00000015364) ENSOMYG00000075779 depdc1a (ENSOMYG00000015417) RPE65 (ENSOMYG00000015503) si:ch211-198n5.11 (ENSOMYG00000015763) ENSOMYG00000016042 ENSOMYG00000017088 ENSOMYG00000017216 ENSOMYG00000017784 gclm (ENSOMYG00000017785) ENSOMYG00000017789 spata6 (ENSOMYG00000017805) ENSOMYG00000057857 Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000154973.a.b.a ENSGT00390000013989.a.n ENSGT00940000158159.d ENSGT00390000016356 ENSGT00390000017679 ENSGT00950000182988.a.a.b.i ENSGT00390000003020.d ENSGT00530000063816.d.m ENSGT01050000244955.b.c.c ENSGT01050000244897.a.a.b.b.a ENSGT00460000041630 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00940000180153 ENSGT00950000183189.a.b.a.k.b.a #22 ENSGT00940000154384 #23 ENSGT00950000183189.a.b.a.k.a #22 ENSGT00940000156968.o ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ENSGT00390000001724.l.a.b ENSGT00940000155042.a.a.f Coho salmon MODERN SPECIES 4 plekhb2 (ENSOKIG00005035902) ENSOKIG00005035851 pigx (ENSOKIG00005035834) cep19 (ENSOKIG00005035826) PAK2 (ENSOKIG00005035217) RPP21 (ENSOKIG00005035109) ENSOKIG00005035097 gpc5b (ENSOKIG00005035079) gpc1a (ENSOKIG00005034952) ENSOKIG00005034923 ENSOKIG00005034896 EPHB1 (ENSOKIG00005034400) ENSOKIG00005034359 LRRC24 (ENSOKIG00005034351) ENSOKIG00005034304 fxr1 (ENSOKIG00005034123) #22 dnajc19 (ENSOKIG00005034062) #23 ENSOKIG00005034048 lrrc40 (ENSOKIG00005033596) ENSOKIG00005033541 LRRC7 (ENSOKIG00005033328) depdc1a (ENSOKIG00005033179) RPE65 (ENSOKIG00005032666) si:ch211-198n5.11 (ENSOKIG00005032544) FNBP1L (ENSOKIG00005031481) bcar3 (ENSOKIG00005031321) ENSOKIG00005031306 slc5a9 (ENSOKIG00005031041) gclm (ENSOKIG00005030983) ENSOKIG00005030940 spata6 (ENSOKIG00005030930) Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000153902.a.f ENSGT00940000154973.a.b.a ENSGT00390000013989.a.n ENSGT00940000158159.d ENSGT00390000016356 ENSGT00390000017679 ENSGT00950000182988.a.a.b.i ENSGT00390000003020.d ENSGT00530000063816.d.m ENSGT01050000244955.b.c.c ENSGT01050000244897.a.a.b.b.a ENSGT00460000041630 ENSGT00940000155297.hb.b.b ENSGT00990000204094.c.b ENSGT00940000160141.e.b.a ENSGT00950000183189.a.b.a.k.b.b #22 ENSGT00940000154384 #23 ENSGT00950000183189.a.b.a.k.a #22 ENSGT00940000156968.o ENSGT00940000156262.y ENSGT00950000182976.b.a.d ENSGT00950000182913.B.f.f ENSGT00940000164186.a ENSGT00950000183047.c.b.h ENSGT00940000154130.a.a.b.m ENSGT00940000157546 ENSGT00510000047658.c ENSGT00510000048142.v ENSGT00530000063821.a ENSGT00390000001724.l.a.b ENSGT00940000155042.a.a.f Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 129 ENSOMYG00000063461 #22 ENSOMYG00000075353 #23 Rainbow trout MODERN SPECIES 164 ENSOMYG00000058764 #22 ENSOMYG00000076712 #23 Huchen MODERN SPECIES 823 LRRC24 (ENSHHUG00000031882) fxr1 (ENSHHUG00000031921) #22 dnajc19 (ENSHHUG00000033755) #23 sox2 (ENSHHUG00000033803) #24 lrrc40 (ENSHHUG00000033830) LRRC7 (ENSHHUG00000033986) Protacanthopterygii ANCESTRAL SPECIES 104 ENSGT00950000182865.b.a.b.b.a.a.a ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00950000183189.a.b.a.k #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156968.o ENSGT00960000186843 ENSGT00940000156968.p ENSGT00940000156262 ENSGT00950000182976.b.a ENSGT00950000182913.B.f ENSGT00940000164186.a ENSGT00950000183047.c.b ENSGT00940000154130.a.a.b ENSGT00940000165232 ENSGT00940000157546 ENSGT00510000047658 Salmoninae ANCESTRAL SPECIES 363 ENSGT00940000154507.t ENSGT00940000160141.e.b.b ENSGT00980000203290 ENSGT00390000013701.s #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00940000160614.j #24 ENSGT00940000156968.p ENSGT00940000156262.z ENSGT00950000182976.b.a.c ENSGT00950000182913.B.f.e ENSGT00950000183047.c.b.g ENSGT00940000154130.a.a.b.n ENSGT00940000165232.g ENSGT00510000047658.d ENSGT00510000048142.u ENSGT00390000001724.l.b.a ENSGT00940000155042.a.a.e ENSGT00390000001724.l.a ENSGT00940000155042.a.b ENSGT00940000157399.b Huchen MODERN SPECIES 398 ENSHHUG00000050079 LRRC24 (ENSHHUG00000050076) ttc14 (ENSHHUG00000050074) #20 fxr1 (ENSHHUG00000050063) #22 ENSHHUG00000050059 sox2 (ENSHHUG00000050049) #24 LRRC7 (ENSHHUG00000049968) ENSHHUG00000049946 RPE65 (ENSHHUG00000049867) ENSHHUG00000049862 fnbp1l (ENSHHUG00000049849) bcar3 (ENSHHUG00000049830) zgc:171480 (ENSHHUG00000049818) gclm (ENSHHUG00000049802) dnttip2 (ENSHHUG00000049791) AGBL4 (ENSHHUG00000049771) Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000153321.b.a.n.b ENSGT00940000153902.a.e ENSGT00940000154973.a.b.b ENSGT00390000013989.a.m ENSGT00940000158159.c ENSGT00950000182988.a.a.b.j ENSGT00390000003020.c ENSGT00530000063816.d.n ENSGT01050000244955.b.c.d ENSGT01050000244897.a.a.b.b.b ENSGT00940000155297.hb.b.a ENSGT00940000154507.t ENSGT00940000160141.e.b.b ENSGT00980000203290 ENSGT00390000013701.s #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00940000160614.j #24 ENSGT00940000156968.p ENSGT00940000156262.z ENSGT00950000182976.b.a.c ENSGT00950000182913.B.f.e ENSGT00950000183047.c.b.g ENSGT00940000154130.a.a.b.n ENSGT00940000165232.g ENSGT00510000047658.d ENSGT00510000048142.u ENSGT00390000001724.l.b.a ENSGT00940000155042.a.a.e ENSGT00390000001724.l.a.a ENSGT00940000155042.a.b ENSGT00940000157399.b Oncorhynchus ANCESTRAL SPECIES ENSGT00940000153321.b.a.n.b ENSGT00940000153902.a.e ENSGT00940000154973.a.b.b ENSGT00390000013989.a.m ENSGT00940000158159.c ENSGT00950000182988.a.a.b.j ENSGT00390000003020.c ENSGT00530000063816.d.n ENSGT01050000244955.b.c.d ENSGT01050000244897.a.a.b.b.b ENSGT00940000155297.hb.b.a ENSGT00940000154507.t ENSGT00940000160141.e.b.b ENSGT00980000203290 ENSGT00390000013701.s #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00940000156968.p ENSGT00940000156262.z ENSGT00950000182976.b.a.c ENSGT00950000182913.B.f.e ENSGT00950000183047.c.b.g ENSGT00940000154130.a.a.b.n ENSGT00940000165232.g ENSGT00510000047658.d ENSGT00510000048142.u ENSGT00390000001724.l.b.a ENSGT00940000155042.a.a.e ENSGT00390000001724.l.a.a ENSGT00940000155042.a.b ENSGT00940000157399.b ENSGT00940000161649.e Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153321.b.a.n.b ENSGT00940000153902.a.e ENSGT00940000154973.a.b.b ENSGT00390000013989.a.m ENSGT00940000158159.c ENSGT00950000182988.a.a.b.j ENSGT00390000003020.c ENSGT00530000063816.d.n ENSGT01050000244955.b.c.d ENSGT01050000244897.a.a.b.b.b ENSGT00940000155297.hb.b.a ENSGT00940000154507.t ENSGT00940000160141.e.b.b ENSGT00980000203290 ENSGT00390000013701.s #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00940000156968.p ENSGT00940000156262.z ENSGT00950000182976.b.a.c ENSGT00950000182913.B.f.e ENSGT00950000183047.c.b.g ENSGT00940000154130.a.a.b.n ENSGT00940000165232.g ENSGT00510000047658.d ENSGT00510000048142.u ENSGT00940000155042.a.a.e ENSGT00390000001724.l.a.a ENSGT00940000155042.a.b ENSGT00940000157399.b ENSGT00940000161649.e ENSGT00940000154831.h.b Chinook salmon MODERN SPECIES ankrd29 (ENSOTSG00005022010) ENSOTSG00005022012 plekhb2 (ENSOTSG00005022014) ENSOTSG00005022015 ing5a (ENSOTSG00005022017) pak2b (ENSOTSG00005022019) ENSOTSG00005022049 rpp21 (ENSOTSG00005022052) aqp12 (ENSOTSG00005022055) gpc5b (ENSOTSG00005022063) EPHB1 (ENSOTSG00005022087) ENSOTSG00005023138 LRRC24 (ENSOTSG00005023139) ENSOTSG00005023140 ttc14 (ENSOTSG00005023142) #20 fxr1 (ENSOTSG00005023147) #22 lrrc40 (ENSOTSG00005023153) LRRC7 (ENSOTSG00005023156) bcar3 (ENSOTSG00005023225) zgc:171480 (ENSOTSG00005023796) gclm (ENSOTSG00005023797) dnttip2 (ENSOTSG00005023798) AGBL4 (ENSOTSG00005023799) bend5 (ENSOTSG00005023801) ENSOTSG00005023802 agbl4 (ENSOTSG00005023803) elavl4 (ENSOTSG00005023804) dmrta2 (ENSOTSG00005024723) faf1 (ENSOTSG00005024724) cdkn2c (ENSOTSG00005025367) ENSOTSG00005025368 Coho salmon MODERN SPECIES 1 plekhb2 (ENSOKIG00005045179) ing5a (ENSOKIG00005045202) pak2b (ENSOKIG00005045291) rpp21 (ENSOKIG00005045364) aqp12 (ENSOKIG00005045372) gpc5b (ENSOKIG00005045379) gpc1a (ENSOKIG00005045403) ENSOKIG00005045424 EPHB1 (ENSOKIG00005045460) ENSOKIG00005045550 ENSOKIG00005045556 ENSOKIG00005045564 LRRC24 (ENSOKIG00005045578) ENSOKIG00005045586 ttc14 (ENSOKIG00005045600) #20 ENSOKIG00005045700 #22 LRRC40 (ENSOKIG00005045734) LRRC7 (ENSOKIG00005045795) DEPDC1 (ENSOKIG00005045926) ENSOKIG00005045956 RPE65 (ENSOKIG00005045996) fnbp1l (ENSOKIG00005046644) bcar3 (ENSOKIG00005046712) ENSOKIG00005046725 ENSOKIG00005046729 gclm (ENSOKIG00005046734) dnttip2 (ENSOKIG00005046742) AGBL4 (ENSOKIG00005046746) bend5 (ENSOKIG00005046749) agbl4 (ENSOKIG00005046754) elavl4 (ENSOKIG00005046766) Rainbow trout MODERN SPECIES 22 ENSOMYG00000020955 plekhb2 (ENSOMYG00000020988) ENSOMYG00000021002 ENSOMYG00000021235 ENSOMYG00000022895 ENSOMYG00000022904 gpc1a (ENSOMYG00000022966) ENSOMYG00000064696 ENSOMYG00000023572 ENSOMYG00000068701 ENSOMYG00000012367 ENSOMYG00000025776 ENSOMYG00000025794 ENSOMYG00000025802 ENSOMYG00000025899 #20 ENSOMYG00000026170 #22 ENSOMYG00000057336 LRRC7 (ENSOMYG00000026410) ENSOMYG00000055547 ENSOMYG00000026674 RPE65 (ENSOMYG00000027040) fnbp1l (ENSOMYG00000027907) ENSOMYG00000028020 zgc:171480 (ENSOMYG00000028076) dnttip2 (ENSOMYG00000028177) bend5 (ENSOMYG00000002676) ENSOMYG00000055718 elavl4 (ENSOMYG00000002966) dmrta2 (ENSOMYG00000003182) faf1 (ENSOMYG00000003274) ENSOMYG00000074743 Salmo ANCESTRAL SPECIES 20 ENSGT00940000153321.b.a.n.b ENSGT00940000153902.a.e ENSGT00940000154973.a.b.b ENSGT00390000013989.a.m ENSGT00940000158159.c ENSGT00950000182988.a.a.b.j ENSGT00530000063816.d.n ENSGT00390000003020.c ENSGT01050000244955.b.c.d ENSGT01050000244897.a.a.b.b.b ENSGT00940000155297.hb.b.a ENSGT00940000154507.t ENSGT00940000160141.e.b.b ENSGT00980000203290 ENSGT00390000013701.s #20 ENSGT00950000183189.a.b.a.l #22 ENSGT00940000160614.j #24 ENSGT00940000156968.p ENSGT00940000156262.z ENSGT00950000182976.b.a.c ENSGT00950000182913.B.f.e ENSGT00950000183047.c.b.g ENSGT00940000154130.a.a.b.n ENSGT00940000165232.g ENSGT00510000047658.d ENSGT00510000048142.u ENSGT00390000001724.l.b.a ENSGT00940000157399.b ENSGT00940000161649.e ENSGT00940000154831.h.b ENSGT00940000160194.k Atlantic salmon MODERN SPECIES 15 ENSSSAG00000045684 ankrd29 (ENSSSAG00000086124) ENSSSAG00000044992 ENSSSAG00000044949 ENSSSAG00000041114 ENSSSAG00000042555 ENSSSAG00000082107 ENSSSAG00000101423 ENSSSAG00000086964 gpc5b (ENSSSAG00000043871) gpc1a (ENSSSAG00000042394) ephb1 (ENSSSAG00000041250) ENSSSAG00000041180 ENSSSAG00000041164 ttc14 (ENSSSAG00000041099) #20 ENSSSAG00000118997 #22 sox2 (ENSSSAG00000088464) #24 ENSSSAG00000085029 ENSSSAG00000084166 ENSSSAG00000041043 ENSSSAG00000040989 LRRC7 (ENSSSAG00000012965) DEPDC1 (ENSSSAG00000011177) RPE65 (ENSSSAG00000008787) fnbp1l (ENSSSAG00000080709) bcar3 (ENSSSAG00000080653) zgc:171480 (ENSSSAG00000080639) gclm (ENSSSAG00000094075) dnttip2 (ENSSSAG00000080634) bend5 (ENSSSAG00000080616) elavl4 (ENSSSAG00000080587) Northern pike MODERN SPECIES 7 OSBPL1A (ENSELUG00000013634) ttc39c (ENSELUG00000013479) ENSELUG00000013401 ankrd29 (ENSELUG00000013386) plekhb2 (ENSELUG00000013300) ing5 (ENSELUG00000013274) cep19 (ENSELUG00000013204) pigx (ENSELUG00000013193) pak2b (ENSELUG00000013169) PTGER3 (ENSELUG00000013065) zranb2 (ENSELUG00000013041) EPHB1 (ENSELUG00000013008) LRRC24 (ENSELUG00000012962) ENSELUG00000000468 ttc14 (ENSELUG00000012936) #20 fxr1 (ENSELUG00000012917) #22 dnajc19 (ENSELUG00000012861) #23 sox2 (ENSELUG00000012841) #24 lrrc40 (ENSELUG00000012790) LRRC7 (ENSELUG00000012686) depdc1a (ENSELUG00000012378) rpe65b (ENSELUG00000012274) si:ch211-198n5.11 (ENSELUG00000001601) mmachc (ENSELUG00000012175) ENSELUG00000012158 ENSELUG00000012150 ENSELUG00000012123 IPO13 (ENSELUG00000001498) pfas (ENSELUG00000011791) ENSELUG00000011714 hook1 (ENSELUG00000011682) Osteoglossiformes DUPLICATION Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 221 ENSGT00390000015010 #21 ENSGT00950000183189.a.b.a.m.a #22 ENSGT00940000154384 #23 ENSGT00940000160614 #24 ENSGT00940000156162.C #25 ENSGT00940000154552.i #26 ENSGT00940000153783.b.b.d.h ENSGT00940000159676.b ENSGT00940000156299.fb ENSGT00950000183039.B.b.d #8 ENSGT00940000155531.a.b ##10 ENSGT00950000183039.B.a #11 ENSGT00390000018195 ENSGT00940000165367.b ENSGT00940000167389 ENSGT00940000158024.B.e ENSGT01100000263484.A.c.a.a.b P. kingsleyae MODERN SPECIES 279 ENSPKIG00000014384 ENSPKIG00000014373 CCDC39 (ENSPKIG00000014216) #21 dnajc19 (ENSPKIG00000014152) #23 fxr1 (ENSPKIG00000014091) #22 sox2 (ENSPKIG00000014053) #24 ATP11B (ENSPKIG00000013980) #25 dcun1d1 (ENSPKIG00000013939) #26 EIF4A2 (ENSPKIG00000013856) b3gnt5b (ENSPKIG00000013843) ENSPKIG00000013678 ect2 (ENSPKIG00000013550) nlgn1 (ENSPKIG00000013470) Asian bonytongue MODERN SPECIES 17 OPA1 (ENSSFOG00015012833) ENSSFOG00015028539 ENSSFOG00015031548 fam43a (ENSSFOG00015028212) b3gnt7 (ENSSFOG00015013183) ENSSFOG00015013153 ENSSFOG00015031576 DIS3L2 (ENSSFOG00015013209) ACAP2 (ENSSFOG00015013347) HTR2B (ENSSFOG00015026796) ENSSFOG00015013467 eif2b5 (ENSSFOG00015013408) ENSSFOG00015026000 ENSSFOG00015029763 CCDC39 (ENSSFOG00015013492) #21 fxr1 (ENSSFOG00015013518) #22 dnajc19 (ENSSFOG00015013549) #23 sox2 (ENSSFOG00015033213) #24 ENSSFOG00015013618 #25 dcun1d1 (ENSSFOG00015013831) #26 EIF4A2 (ENSSFOG00015013858) b3gnt5b (ENSSFOG00015014030) ENSSFOG00015013908 ect2 (ENSSFOG00015014038) nlgn1 (ENSSFOG00015014077) ENSSFOG00015014101 kcnmb2 (ENSSFOG00015028985) #8 PIK3CA (ENSSFOG00015014161) ##10 KCNMB3 (ENSSFOG00015014201) #11 polr2h (ENSSFOG00015014221) ENSSFOG00015014240 Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183189.a.b.a.m.b #22 P. kingsleyae MODERN SPECIES 177 tmem44 (ENSPKIG00000002946) lsg1 (ENSPKIG00000002895) fam43a (ENSPKIG00000002870) XXYLT1 (ENSPKIG00000002844) ARMC9 (ENSPKIG00000002681) b3gnt7 (ENSPKIG00000002643) ncl (ENSPKIG00000002604) nppc (ENSPKIG00000002587) ENSPKIG00000002559 alpi.1 (ENSPKIG00000002501) ppp1r2 (ENSPKIG00000002482) acap2b (ENSPKIG00000002327) htr2b (ENSPKIG00000002239) psmd1 (ENSPKIG00000002162) ttc14 (ENSPKIG00000002114) #20 fxr1 (ENSPKIG00000002030) #22 sox2 (ENSPKIG00000001950) #24 rpf1 (ENSPKIG00000001892) ctbs (ENSPKIG00000001857) Osteoglossiformes ANCESTRAL SPECIES 170 ENSGT01030000234960 ENSGT00940000161593 ENSGT00940000158154 ENSGT00390000018026 ENSGT00940000157606.k ENSGT00940000163473.i ENSGT00390000015492.B.b ENSGT00950000183063.c.b.b ENSGT00950000183063.c.b.a ENSGT00390000004757 ENSGT00940000156389.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000174617 ENSGT00390000013701 #20 ENSGT00950000183189.a.b.a.n #22 ENSGT00940000154552.j #26 ENSGT00940000156941 #27 ENSGT00950000182899.C.a ENSGT00950000182930.B ENSGT00940000153783.b.b.d.g ENSGT00550000074917 ENSGT00940000161734 ENSGT00940000159676.a ENSGT00940000156299.gb ENSGT00940000155789 ENSGT01030000234598.a.b ENSGT00940000153421.a.a.b ENSGT00950000183039.B.b.c #8 ENSGT00730000111202 #9 ENSGT00940000155531.b #10 Asian bonytongue MODERN SPECIES 23 fam43a (ENSSFOG00015027992) ENSSFOG00015008782 XXYLT1 (ENSSFOG00015008748) ARMC9 (ENSSFOG00015008670) b3gnt7 (ENSSFOG00015008624) ncl (ENSSFOG00015008583) nppc (ENSSFOG00015008559) alpi.1 (ENSSFOG00015008524) alpi.2 (ENSSFOG00015008482) ppp1r2 (ENSSFOG00015008470) acap2b (ENSSFOG00015008404) psmd1 (ENSSFOG00015008285) htr2b (ENSSFOG00015008356) ENSSFOG00015033248 ttc14 (ENSSFOG00015008195) #20 FXR1 (ENSSFOG00015008103) #22 ATP11B (ENSSFOG00015007895) #25 ENSSFOG00015007841 #26 mccc1 (ENSSFOG00015007784) #27 ENSSFOG00015007762 ENSSFOG00015007642 eif4a2 (ENSSFOG00015007526) rfc4 (ENSSFOG00015007485) ENSSFOG00015007390 b3gnt5a (ENSSFOG00015007473) ECT2 (ENSSFOG00015007297) ENSSFOG00015026188 NLGN1 (ENSSFOG00015007276) NLGN1 (ENSSFOG00015025005) NAALADL2 (ENSSFOG00015007188) gngt2a (ENSSFOG00015028680) Spotted gar MODERN SPECIES 652 ttc14 (ENSLOCG00000000432) #20 CCDC39 (ENSLOCG00000000553) #21 fxr1 (ENSLOCG00000000589) #22 dnajc19 (ENSLOCG00000000624) #23 sox2 (ENSLOCG00000017346) #24 ATP11B (ENSLOCG00000000659) #25 dcun1d1 (ENSLOCG00000000735) #26 ENSLOCG00000000758 mccc1 (ENSLOCG00000000778) #27 ENSLOCG00000000806 ENSLOCG00000000828 eif4a2 (ENSLOCG00000000847) rfc4 (ENSLOCG00000000876) ENSLOCG00000000896 b3gnt5a (ENSLOCG00000017371) ect2 (ENSLOCG00000000941) SPATA16 (ENSLOCG00000000975) nlgn1 (ENSLOCG00000000991) Reedfish MODERN SPECIES 10 slc19a3b (ENSECRG00000013661) SLC19A3 (ENSECRG00000013619) agfg1b (ENSECRG00000013605) TM4SF20 (ENSECRG00000013585) mrpl44 (ENSECRG00000013575) mffb (ENSECRG00000013552) COL4A4 (ENSECRG00000013507) rhbdd1 (ENSECRG00000013491) IRS1 (ENSECRG00000013482) NYAP2 (ENSECRG00000013473) MECOM (ENSECRG00000013444) megf6 (ENSECRG00000013193) CCDC39 (ENSECRG00000013005) #21 ttc14 (ENSECRG00000012645) #20 CCDC39 (ENSECRG00000012508) #21 fxr1 (ENSECRG00000012461) #22 dnajc19 (ENSECRG00000012439) #23 sox2 (ENSECRG00000012429) #24 ENSECRG00000012422 ATP11B (ENSECRG00000012239) #25 dcun1d1 (ENSECRG00000012170) #26 ENSECRG00000012146 mccc1 (ENSECRG00000012124) #27 ENSECRG00000012114 ENSECRG00000012094 eif4a2 (ENSECRG00000012026) rfc4 (ENSECRG00000011992) b3gnt5a (ENSECRG00000011979) MCF2L2 (ENSECRG00000011952) ect2 (ENSECRG00000011854) SPATA16 (ENSECRG00000011817)