Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183170.b.b #22
Gnathostomata	ANCESTRAL SPECIES	498											ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00730000110871.a.a.a.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514
Euteleostomi	ANCESTRAL SPECIES	529												ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b
Sarcopterygii	ANCESTRAL SPECIES	472												ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b
Tetrapoda	ANCESTRAL SPECIES	6					ENSGT00940000167200	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01030000235951	ENSGT00940000155311.B	ENSGT00940000154486.b.b	ENSGT00940000154486.b.a.a.b	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000178952
Amniota	ANCESTRAL SPECIES	6				ENSGT00940000167200	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00950000183546	ENSGT00940000163601	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01030000235951	ENSGT00940000155311.B	ENSGT00940000154486.b.b	ENSGT00940000154486.b.a.a.b	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000178952
Mammalia	ANCESTRAL SPECIES	7	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25	ENSGT00940000161997.a #24	ENSGT00940000154486.b.b	ENSGT00940000154486.b.a.a.b	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000157267	ENSGT00940000159677.d
Theria	ANCESTRAL SPECIES	58	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Eutheria	ANCESTRAL SPECIES	5	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Cetacea	ANCESTRAL SPECIES	10	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.p #26
Odontoceti	ANCESTRAL SPECIES	9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000162768.B #16	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.p #26
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.p #26
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.p #26
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000162768.B #16	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.p #26
Beluga whale	MODERN SPECIES	111	UBE2G2 (ENSDLEG00000020904) #7	ENSDLEG00000020900 #8	PTTG1IP (ENSDLEG00000020895) #9	ITGB2 (ENSDLEG00000020885) #10	ENSDLEG00000020878 #11	ADARB1 (ENSDLEG00000020872) #12	POFUT2 (ENSDLEG00000020860) #13	COL18A1 (ENSDLEG00000020803) #14	SLC19A1 (ENSDLEG00000020790) #15	ENSDLEG00000020780 #16	ENSDLEG00000020776 #17	FTCD (ENSDLEG00000020687) #18	SPATC1L (ENSDLEG00000020661) #19	LSS (ENSDLEG00000020129) #20	MCM3AP (ENSDLEG00000020070) #21	YBEY (ENSDLEG00000020063) #22	DIP2A (ENSDLEG00000018787) #23	S100B (ENSDLEG00000018617) #24	PRMT2 (ENSDLEG00000018566) #25	ENSDLEG00000018551 #26	ENSDLEG00000018519 #27	ACR (ENSDLEG00000018484) #28	SHANK3 (ENSDLEG00000018244) #29	ARSA (ENSDLEG00000018210) #30	MAPK8IP2 (ENSDLEG00000018192) #31	CHKB (ENSDLEG00000018187) #32	CPT1B (ENSDLEG00000018146) #33	ODF3B (ENSDLEG00000018114) #34	SCO2 (ENSDLEG00000018105) #35	NCAPH2 (ENSDLEG00000018066) #36	LMF2 (ENSDLEG00000018051) #37
Narwhal	MODERN SPECIES	297	ITGB2 (ENSMMNG00015001076) #10	SLX9 (ENSMMNG00015001036) #11	ADARB1 (ENSMMNG00015001009) #12	POFUT2 (ENSMMNG00015000876) #13	ENSMMNG00015000658	SLC19A1 (ENSMMNG00015000587) #15	PCBP3 (ENSMMNG00015000534)	ENSMMNG00015000412	ENSMMNG00015000368	ENSMMNG00015000354	COL6A2 (ENSMMNG00015000293) #17	FTCD (ENSMMNG00015000207) #18	SPATC1L (ENSMMNG00015000171) #19	LSS (ENSMMNG00015000081) #20	MCM3AP (ENSMMNG00015002634) #21	YBEY (ENSMMNG00015002581) #22	ENSMMNG00015002525	DIP2A (ENSMMNG00015002213) #23	S100B (ENSMMNG00015002108) #24	PRMT2 (ENSMMNG00015002069) #25
Vaquita	MODERN SPECIES	15	PTTG1IP (ENSPSNG00000013293) #9	ENSPSNG00000013374 ##10	ENSPSNG00000013509	SLX9 (ENSPSNG00000013591) #11	ADARB1 (ENSPSNG00000013670) #12	POFUT2 (ENSPSNG00000013804) #13	COL18A1 (ENSPSNG00000013985) #14	SLC19A1 (ENSPSNG00000014338) #15	ENSPSNG00000014382 #16	COL6A1 (ENSPSNG00000014616)	COL6A2 (ENSPSNG00000014738) #17	FTCD (ENSPSNG00000014870) #18	SPATC1L (ENSPSNG00000015232) #19	LSS (ENSPSNG00000015377) #20	MCM3AP (ENSPSNG00000015503) #21	ENSPSNG00000015602 #22	ENSPSNG00000015771	ENSPSNG00000015809	ENSPSNG00000015929 #23	ENSPSNG00000016067 #23	S100B (ENSPSNG00000016108) #24	PRMT2 (ENSPSNG00000016182) #25	ENSPSNG00000016334 #26
Dolphin	MODERN SPECIES	1333														LSS (ENSTTRG00000000356) #20	MCM3AP (ENSTTRG00000000357) #21	ENSTTRG00000000360 #22	ENSTTRG00000000361	ENSTTRG00000000362
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	16	NOD1 (ENSPCTG00005005030)	ZNRF2 (ENSPCTG00005005053)	ENSPCTG00005005086	MTURN (ENSPCTG00005005111)	PLEKHA8 (ENSPCTG00005005155)	FKBP14 (ENSPCTG00005005226)	SCRN1 (ENSPCTG00005005255)	WIPF3 (ENSPCTG00005005378)	PRR15 (ENSPCTG00005005430)	CHN2 (ENSPCTG00005005501)	CPVL (ENSPCTG00005005992)	TRIL (ENSPCTG00005006053)	CREB5 (ENSPCTG00005006108)	JAZF1 (ENSPCTG00005006349)	ENSPCTG00005006433	ENSPCTG00005006916 #22	ENSPCTG00005006930	HIBADH (ENSPCTG00005006944)	EVX1 (ENSPCTG00005006960)	HOXA13 (ENSPCTG00005006985)	HOXA11 (ENSPCTG00005000283)	ENSPCTG00005000317	ENSPCTG00005000324	HOXA9 (ENSPCTG00005000359)	HOXA7 (ENSPCTG00005000380)	HOXA6 (ENSPCTG00005000391)	HOXA5 (ENSPCTG00005000400)	HOXA4 (ENSPCTG00005000409)	HOXA2 (ENSPCTG00005000420)	HOXA1 (ENSPCTG00005000429)	SKAP2 (ENSPCTG00005000453)
Sperm whale	MODERN SPECIES	19	BRD9 (ENSPCTG00005001199) ##22	ENSPCTG00005001162	TPPP (ENSPCTG00005001138)	SLC9A3 (ENSPCTG00005001031)	EXOC3 (ENSPCTG00005000986)	AHRR (ENSPCTG00005000954)	PDCD6 (ENSPCTG00005000919)	SDHA (ENSPCTG00005000654)	CCDC127 (ENSPCTG00005000571)	LRRC14B (ENSPCTG00005000554)	ENSPCTG00005000466 #26	PRMT2 (ENSPCTG00005000392) #25	S100B (ENSPCTG00005020925) #24	DIP2A (ENSPCTG00005020857) #23	ENSPCTG00005020792 #21	YBEY (ENSPCTG00005020716) #22	ENSPCTG00005020614	ENSPCTG00005020548 #20	SPATC1L (ENSPCTG00005020505) #19	FTCD (ENSPCTG00005020224) #18	COL6A2 (ENSPCTG00005020074) #17	COL6A1 (ENSPCTG00005019551)	PCBP3 (ENSPCTG00005019331)	SLC19A1 (ENSPCTG00005019281) #15	POFUT2 (ENSPCTG00005017994) #13	ADARB1 (ENSPCTG00005017937) #12	ITGB2 (ENSPCTG00005017857) #10	ENSPCTG00005017771	ENSPCTG00005017676	LRRC3 (ENSPCTG00005017660)	ENSPCTG00005017608
Blue whale	MODERN SPECIES	15	UBE2G2 (ENSBMSG00010007343) #7	SUMO3 (ENSBMSG00010007354) ##8	PTTG1IP (ENSBMSG00010007362) #9	ITGB2 (ENSBMSG00010007391) #10	SLX9 (ENSBMSG00010007433) #11	ADARB1 (ENSBMSG00010003764) #12	POFUT2 (ENSBMSG00010003795) #13	COL18A1 (ENSBMSG00010003836) #14	SLC19A1 (ENSBMSG00010003963) #15	PCBP3 (ENSBMSG00010003986)	COL6A1 (ENSBMSG00010004019)	COL6A2 (ENSBMSG00010004034) #17	FTCD (ENSBMSG00010004051) #18	LSS (ENSBMSG00010004134) #20	MCM3AP (ENSBMSG00010004232) #21	ENSBMSG00010004263 #22	ENSBMSG00010004286	DIP2A (ENSBMSG00010004306) #23	S100B (ENSBMSG00010004349) #24	PRMT2 (ENSBMSG00010004381) #25
Pecora	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.p.a #26	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.b #26	ENSGT00940000159602.c.b	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00510000046499.`c.a.c.a.a
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000013199 #9	ITGB2 (ENSCHYG00000013305) #10	SLX9 (ENSCHYG00000013417) #11	ADARB1 (ENSCHYG00000013492) #12	POFUT2 (ENSCHYG00000013580) #13	ENSCHYG00000013809	SLC19A1 (ENSCHYG00000014939) #15	PCBP3 (ENSCHYG00000015231)	ENSCHYG00000015578	COL6A1 (ENSCHYG00000015735)	COL6A2 (ENSCHYG00000016288) #17	FTCD (ENSCHYG00000017995) #18	SPATC1L (ENSCHYG00000018089) #19	LSS (ENSCHYG00000018157) #20	MCM3AP (ENSCHYG00000018660) #21	YBEY (ENSCHYG00000019060) #22	PCNT (ENSCHYG00000019684)	DIP2A (ENSCHYG00000021088) #23	S100B (ENSCHYG00000022569) #24	PRMT2 (ENSCHYG00000022622) #25	ENSCHYG00000022791 #26	FBXO25 (ENSCHYG00000022825)	TDRP (ENSCHYG00000022964)	ENSCHYG00000023002 #26	ENSCHYG00000023032	RUNX1 (ENSCHYG00000023067)	SETD4 (ENSCHYG00000023190)	ENSCHYG00000023267	ENSCHYG00000023358	ENSCHYG00000023378	ENSCHYG00000023406
Percora_a	ANCESTRAL SPECIES	7	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.b #26	ENSGT00940000159602.c.a	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00510000046499.`c.a.c.a.a
Siberian musk deer	MODERN SPECIES	1185	ITGB2 (ENSMMSG00000012884) #10	SLX9 (ENSMMSG00000012926) #11	ENSMMSG00000012948	ADARB1 (ENSMMSG00000012958) #12	POFUT2 (ENSMMSG00000012988) #13	COL18A1 (ENSMMSG00000013041) #14	SLC19A1 (ENSMMSG00000013111) #15	PCBP3 (ENSMMSG00000013149)	ENSMMSG00000013267	ENSMMSG00000013286	COL6A2 (ENSMMSG00000013324) #17	FTCD (ENSMMSG00000012880) #18	SPATC1L (ENSMMSG00000012984) #19	LSS (ENSMMSG00000013009) #20	MCM3AP (ENSMMSG00000013071) #21	YBEY (ENSMMSG00000013126) #22	PCNT (ENSMMSG00000013234)	DIP2A (ENSMMSG00000013513) #23	S100B (ENSMMSG00000013818) #24	PRMT2 (ENSMMSG00000013848) #25	ENSMMSG00000013903	FBXO25 (ENSMMSG00000013966)	TDRP (ENSMMSG00000014000)	ENSMMSG00000014024 #26	RUNX1 (ENSMMSG00000014047)	SETD4 (ENSMMSG00000014122)	ENSMMSG00000014178	ENSMMSG00000014188	CBR3 (ENSMMSG00000014250)	DOP1B (ENSMMSG00000014259)	MORC3 (ENSMMSG00000014310)
Bovidae	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a #26	ENSGT00940000159602.c.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d
Bovinae	ANCESTRAL SPECIES	6	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a.a #26	ENSGT00940000159602.c.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d
Bos	ANCESTRAL SPECIES	7	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.f	ENSGT00390000017888	ENSGT00960000186612.A.p.a.a #26	ENSGT00940000159602.c.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d
Bos_b	ANCESTRAL SPECIES	5	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.f	ENSGT00390000017888	ENSGT00960000186612.A.p.a.b #26	ENSGT00960000186612.A.p.a.a #26	ENSGT00940000159602.c.a	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d.c	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005019400 #8	PTTG1IP (ENSBIXG00005019381) #9	ITGB2 (ENSBIXG00005019335) #10	SLX9 (ENSBIXG00005019260) #11	ADARB1 (ENSBIXG00005019197) #12	POFUT2 (ENSBIXG00005019083) #13	COL18A1 (ENSBIXG00005018920) #14	SLC19A1 (ENSBIXG00005018773) #15	PCBP3 (ENSBIXG00005018711)	ENSBIXG00005018619	COL6A2 (ENSBIXG00005006450) #17	FTCD (ENSBIXG00005018494) #18	SPATC1L (ENSBIXG00005018481) #19	LSS (ENSBIXG00005018442) #20	MCM3AP (ENSBIXG00005018185) #21	YBEY (ENSBIXG00005018157) #22	ENSBIXG00005018060	DIP2A (ENSBIXG00005002893) #23	S100B (ENSBIXG00005017738) #24	PRMT2 (ENSBIXG00005017685) #25	ENSBIXG00005002856	FBXO25 (ENSBIXG00005017564)	ENSBIXG00005017443	ENSBIXG00005017410	ENSBIXG00005017402	ENSBIXG00005017394	RUNX1 (ENSBIXG00005005427)	SETD4 (ENSBIXG00005017211)	ENSBIXG00005017175	ENSBIXG00005017141	ENSBIXG00005017110
Cow	MODERN SPECIES		PTTG1IP (ENSBTAG00000021771) #9	ITGB2 (ENSBTAG00000017060) #10	SLX9 (ENSBTAG00000017010) #11	ADARB1 (ENSBTAG00000017486) #12	POFUT2 (ENSBTAG00000007818) #13	COL18A1 (ENSBTAG00000023907) #14	SLC19A1 (ENSBTAG00000024162) #15	PCBP3 (ENSBTAG00000030775)	ENSBTAG00000048318	COL6A1 (ENSBTAG00000011802)	COL6A2 (ENSBTAG00000019269) #17	FTCD (ENSBTAG00000020404) #18	SPATC1L (ENSBTAG00000020409) #19	LSS (ENSBTAG00000018936) #20	MCM3AP (ENSBTAG00000003148) #21	YBEY (ENSBTAG00000003161) #22	C1H21orf58 (ENSBTAG00000021984)	PCNT (ENSBTAG00000030670)	DIP2A (ENSBTAG00000011495) #23	S100B (ENSBTAG00000004777) #24	PRMT2 (ENSBTAG00000005503) #25	ENSBTAG00000052513	FBXO25 (ENSBTAG00000007039)	TDRP (ENSBTAG00000043957)	ENSBTAG00000052599 #26	ENSBTAG00000053000 #26	ENSBTAG00000046447	RUNX1 (ENSBTAG00000004742)	SETD4 (ENSBTAG00000018682)	CBR1 (ENSBTAG00000023384)	ENSBTAG00000052342
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000158193 #7	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.e	ENSGT00390000017888	ENSGT00960000186612.A.p.a.a #26	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00390000016421.b.a
Domestic yak	MODERN SPECIES		ENSBGRG00000000186 #8	PTTG1IP (ENSBGRG00000000193) #9	ITGB2 (ENSBGRG00000000208) #10	SLX9 (ENSBGRG00000000257) #11	ADARB1 (ENSBGRG00000000280) #12	POFUT2 (ENSBGRG00000000326) #13	SLC19A1 (ENSBGRG00000000631) #15	ENSBGRG00000000644	PCBP3 (ENSBGRG00000000669)	COL6A1 (ENSBGRG00000000813)	COL6A2 (ENSBGRG00000000863) #17	FTCD (ENSBGRG00000000949) #18	SPATC1L (ENSBGRG00000001038) #19	LSS (ENSBGRG00000001100) #20	MCM3AP (ENSBGRG00000001560) #21	ENSBGRG00000001586 #22	ENSBGRG00000001632	ENSBGRG00000001685	DIP2A (ENSBGRG00000001765) #23	S100B (ENSBGRG00000002365) #24	PRMT2 (ENSBGRG00000002397) #25	ENSBGRG00000002455	FBXO25 (ENSBGRG00000002483)	ENSBGRG00000002585	ENSBGRG00000002610	RUNX1 (ENSBGRG00000002635)	ENSBGRG00000002722	ENSBGRG00000002732	SETD4 (ENSBGRG00000002744)	CBR1 (ENSBGRG00000002778)	DOP1B (ENSBGRG00000002831)
Wild yak	MODERN SPECIES	1401										COL6A1 (ENSBMUG00000019539)	COL6A2 (ENSBMUG00000019350) #17	FTCD (ENSBMUG00000019201) #18	SPATC1L (ENSBMUG00000019099) #19	LSS (ENSBMUG00000019069) #20	MCM3AP (ENSBMUG00000018534) #21	YBEY (ENSBMUG00000018009) #22	PCNT (ENSBMUG00000017747)	DIP2A (ENSBMUG00000017386) #23	S100B (ENSBMUG00000017272) #24	PRMT2 (ENSBMUG00000017225) #25	FBXO25 (ENSBMUG00000017147)	TDRP (ENSBMUG00000017069)	ENSBMUG00000017055 #26
American bison	MODERN SPECIES	2975	PTTG1IP (ENSBBBG00000015164) #9	ITGB2 (ENSBBBG00000003799) #10	SLX9 (ENSBBBG00000003802) #11	ADARB1 (ENSBBBG00000001357) #12	ENSBBBG00000001345 #13	ENSBBBG00000001334 #13	ENSBBBG00000001319 #14	SLC19A1 (ENSBBBG00000001312) #15	PCBP3 (ENSBBBG00000015403)	COL6A1 (ENSBBBG00000015494)	COL6A2 (ENSBBBG00000015610) #17	FTCD (ENSBBBG00000015621) #18	SPATC1L (ENSBBBG00000015631) #19	LSS (ENSBBBG00000002644) #20	MCM3AP (ENSBBBG00000015748) #21	YBEY (ENSBBBG00000015798) #22	ENSBBBG00000003968	DIP2A (ENSBBBG00000016225) #23	S100B (ENSBBBG00000016247) #24	PRMT2 (ENSBBBG00000016343) #25	ENSBBBG00000016361	FBXO25 (ENSBBBG00000016404)	TDRP (ENSBBBG00000016413)	ENSBBBG00000016420 #26	ENSBBBG00000016432	RUNX1 (ENSBBBG00000016523)	SETD4 (ENSBBBG00000016605)	ENSBBBG00000007614	ENSBBBG00000016692	ENSBBBG00000006958	DOP1B (ENSBBBG00000016914)
Caprinae	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a #26	ENSGT00940000159602.c.a.a	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495
Goat	MODERN SPECIES		PTTG1IP (ENSCHIG00000021017) #9	ITGB2 (ENSCHIG00000014136) #10	SLX9 (ENSCHIG00000017685) #11	ADARB1 (ENSCHIG00000018259) #12	POFUT2 (ENSCHIG00000000514) #13	ENSCHIG00000020589	ENSCHIG00000013263 #14	SLC19A1 (ENSCHIG00000025066) #15	PCBP3 (ENSCHIG00000015841)	ENSCHIG00000004889	COL6A2 (ENSCHIG00000018004) #17	FTCD (ENSCHIG00000010407) #18	SPATC1L (ENSCHIG00000023038) #19	LSS (ENSCHIG00000013212) #20	MCM3AP (ENSCHIG00000025098) #21	YBEY (ENSCHIG00000008074) #22	ENSCHIG00000003698	DIP2A (ENSCHIG00000007147) #23	S100B (ENSCHIG00000021487) #24	PRMT2 (ENSCHIG00000011147) #25	FBXO25 (ENSCHIG00000023287)	TDRP (ENSCHIG00000018317)	ENSCHIG00000010039 #26	ENSCHIG00000020662	RUNX1 (ENSCHIG00000016792)	SETD4 (ENSCHIG00000022771)	ENSCHIG00000004827	ENSCHIG00000011667	ENSCHIG00000019223	ENSCHIG00000007290	CBR3 (ENSCHIG00000021573)
Rambouillet Sheep	MODERN SPECIES		ITGB2 (ENSOARG00020007059) #10	SLX9 (ENSOARG00020007156) #11	ADARB1 (ENSOARG00020007192) #12	POFUT2 (ENSOARG00020007231) #13	COL18A1 (ENSOARG00020007293) #14	SLC19A1 (ENSOARG00020007403) #15	ENSOARG00020007438	PCBP3 (ENSOARG00020007496)	ENSOARG00020008499	ENSOARG00020008540	COL6A2 (ENSOARG00020008627) #17	FTCD (ENSOARG00020008875) #18	SPATC1L (ENSOARG00020008907) #19	LSS (ENSOARG00020008949) #20	MCM3AP (ENSOARG00020009410) #21	YBEY (ENSOARG00020009539) #22	ATP5MD (ENSOARG00020009793)	DIP2A (ENSOARG00020009881) #23	S100B (ENSOARG00020013409) #24	PRMT2 (ENSOARG00020013448) #25	ENSOARG00020013592 #26	FBXO25 (ENSOARG00020013642)	ENSOARG00020013896	ENSOARG00020013947 #26	ENSOARG00020013981	ENSOARG00020014033	RUNX1 (ENSOARG00020014172)	SETD4 (ENSOARG00020014436)	ENSOARG00020014533	ENSOARG00020014594	ENSOARG00020014679
Camelidae	ANCESTRAL SPECIES		ENSGT00950000182895.a.a.a.b.f #8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24
Arabian camel	MODERN SPECIES		ENSCDRG00005021881 #8	PTTG1IP (ENSCDRG00005021882) #9	ITGB2 (ENSCDRG00005021886) #10	SLX9 (ENSCDRG00005021887) #11	ADARB1 (ENSCDRG00005021888) #12	ENSCDRG00005021889 #13	ENSCDRG00005021890 #14	ENSCDRG00005021892 #15	ENSCDRG00005021894 #16	ENSCDRG00005021895	COL6A2 (ENSCDRG00005021902) #17	FTCD (ENSCDRG00005021903) #18	SPATC1L (ENSCDRG00005021904) #19	LSS (ENSCDRG00005021905) #20	MCM3AP (ENSCDRG00005021907) #21	ENSCDRG00005000062 #22	PCNT (ENSCDRG00005000201)	DIP2A (ENSCDRG00005000971) #23	S100B (ENSCDRG00005006127) #24	ENSCDRG00005006148 #26	PRMT2 (ENSCDRG00005006179) #25
Alpaca	MODERN SPECIES	2496														ENSVPAG00000002301 #21	ENSVPAG00000002305	ENSVPAG00000002309 #22
Suina	ANCESTRAL SPECIES	69										ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Pig	MODERN SPECIES	104											COL6A2 (ENSSSCG00000028022) #17	FTCD (ENSSSCG00000027926) #18	SPATC1L (ENSSSCG00000029847) #19	LSS (ENSSSCG00000021418) #20	MCM3AP (ENSSSCG00000026344) #21	YBEY (ENSSSCG00000033116) #22	ENSSSCG00000040897	ENSSSCG00000055020	DIP2A (ENSSSCG00000035657) #23	ENSSSCG00000026140 #24	PRMT2 (ENSSSCG00000022575) #25	ENSSSCG00000057163	ENSSSCG00000043836 #26
Chacoan peccary	MODERN SPECIES	789										ENSCWAG00000006944	COL6A2 (ENSCWAG00000007019) #17	FTCD (ENSCWAG00000007067) #18	SPATC1L (ENSCWAG00000007130) #19	LSS (ENSCWAG00000007171) #20	MCM3AP (ENSCWAG00000007333) #21	YBEY (ENSCWAG00000007409) #22	ENSCWAG00000007453	DIP2A (ENSCWAG00000007571) #23	S100B (ENSCWAG00000010235) #24	PRMT2 (ENSCWAG00000010323) #25
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Equus	ANCESTRAL SPECIES	13	ENSGT00940000157640	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Horse	MODERN SPECIES	18	ITGB2 (ENSECAG00000023061) #10	SLX9 (ENSECAG00000016590) #11	ADARB1 (ENSECAG00000019917) #12	POFUT2 (ENSECAG00000004992) #13	COL18A1 (ENSECAG00000016361) #14	SLC19A1 (ENSECAG00000002116) #15	PCBP3 (ENSECAG00000012413)	ENSECAG00000047101	COL6A1 (ENSECAG00000022731)	COL6A2 (ENSECAG00000019436) #17	FTCD (ENSECAG00000011979) #18	SPATC1L (ENSECAG00000006870) #19	LSS (ENSECAG00000008899) #20	ENSECAG00000047281	MCM3AP (ENSECAG00000018980) #21	YBEY (ENSECAG00000019348) #22	ENSECAG00000049237	PCNT (ENSECAG00000022455)	ENSECAG00000048453	DIP2A (ENSECAG00000052329) #23	S100B (ENSECAG00000012395) #24	PRMT2 (ENSECAG00000012406) #25
Donkey	MODERN SPECIES	9	ENSEASG00005036911 #10	ENSEASG00005018136 #10	ENSEASG00005020183 #10	ENSEASG00005032799 #10	SLX9 (ENSEASG00005023956) #11	ADARB1 (ENSEASG00005007085) #12	POFUT2 (ENSEASG00005007081) #13	COL18A1 (ENSEASG00005038430) #14	SLC19A1 (ENSEASG00005007070) #15	PCBP3 (ENSEASG00005007068)	COL6A1 (ENSEASG00005035660)	COL6A2 (ENSEASG00005007037) #17	FTCD (ENSEASG00005007018) #18	SPATC1L (ENSEASG00005007013) #19	LSS (ENSEASG00005006856) #20	ENSEASG00005006445 #22	MCM3AP (ENSEASG00005006458) #21	ENSEASG00005025745	PCNT (ENSEASG00005006433)	DIP2A (ENSEASG00005002841) #23	S100B (ENSEASG00005028449) #24	ENSEASG00005002664 #25	ENSEASG00005012665	ENSEASG00005012661	SH2D4A (ENSEASG00005012656)	CSGALNACT1 (ENSEASG00005012653)	ENSEASG00005012646	ENSEASG00005012623	POMK (ENSEASG00005027446)	FNTA (ENSEASG00005012598)	ENSEASG00005012593
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00960000191015	ENSGT00940000162768.B #16	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00960000191015	ENSGT00940000162768.B #16	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Microbat	MODERN SPECIES	1538											COL6A2 (ENSMLUG00000015413) #17	FTCD (ENSMLUG00000017344) #18	SPATC1L (ENSMLUG00000017345) #19	LSS (ENSMLUG00000010452) #20	ENSMLUG00000010492 #21	YBEY (ENSMLUG00000024183) #22	ENSMLUG00000007442	PCNT (ENSMLUG00000007473)	DIP2A (ENSMLUG00000007571) #23	ENSMLUG00000022882 #24
Greater horseshoe bat	MODERN SPECIES	11	SLX9 (ENSRFEG00010001351) #11	ADARB1 (ENSRFEG00010001412) #12	ENSRFEG00010001456	ENSRFEG00010001475 #13	ENSRFEG00010001505 #13	ENSRFEG00010001539 #14	SLC19A1 (ENSRFEG00010001553) #15	ENSRFEG00010001565	ENSRFEG00010001580	ENSRFEG00010001629 #16	COL6A1 (ENSRFEG00010001707)	COL6A2 (ENSRFEG00010001753) #17	ENSRFEG00010001831 #18	ENSRFEG00010001886 #19	MCM3AP (ENSRFEG00010001906) #21	YBEY (ENSRFEG00010001954) #22	LSS (ENSRFEG00010002001) #20	ENSRFEG00010002046 #19	ENSRFEG00010002070 #18	ENSRFEG00010002090	ENSRFEG00010002127	DIP2A (ENSRFEG00010002401) #23	S100B (ENSRFEG00010002870) #24	PRMT2 (ENSRFEG00010002906) #25
Carnivora	ANCESTRAL SPECIES	10	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Felidae	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Panthera	ANCESTRAL SPECIES	17	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Panthera_a	ANCESTRAL SPECIES	71	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00960000191699	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
leopard	MODERN SPECIES	167	UBE2G2 (ENSPPRG00000003006) #7	SUMO3 (ENSPPRG00000002862) ##8	PTTG1IP (ENSPPRG00000001982) #9	ITGB2 (ENSPPRG00000001670) #10	SLX9 (ENSPPRG00000012813) #11	ADARB1 (ENSPPRG00000012281) #12	POFUT2 (ENSPPRG00000010612) #13	SLC19A1 (ENSPPRG00000004605) #15	PCBP3 (ENSPPRG00000003933)	COL6A1 (ENSPPRG00000000566)	COL6A2 (ENSPPRG00000024558) #17	FTCD (ENSPPRG00000011402) #18	SPATC1L (ENSPPRG00000008783) #19	LSS (ENSPPRG00000008675) #20	MCM3AP (ENSPPRG00000006018) #21	YBEY (ENSPPRG00000003325) #22	DIP2A (ENSPPRG00000023404) #23	S100B (ENSPPRG00000012850) #24	PRMT2 (ENSPPRG00000011758) #25
lion	MODERN SPECIES	82									ENSPLOG00000012660	COL6A1 (ENSPLOG00000012855)	COL6A2 (ENSPLOG00000013448) #17	FTCD (ENSPLOG00000013562) #18	SPATC1L (ENSPLOG00000013791) #19	LSS (ENSPLOG00000013929) #20	MCM3AP (ENSPLOG00000014376) #21	YBEY (ENSPLOG00000014501) #22	ENSPLOG00000014936	DIP2A (ENSPLOG00000015002) #23	S100B (ENSPLOG00000015114) #24	PRMT2 (ENSPLOG00000015178) #25	ENSPLOG00000015307
Tiger	MODERN SPECIES	64											ENSPTIG00000021416	COL6A2 (ENSPTIG00000001338) #17	FTCD (ENSPTIG00000006361) #18	SPATC1L (ENSPTIG00000008904) #19	LSS (ENSPTIG00000010334) #20	YBEY (ENSPTIG00000015444) #22	ENSPTIG00000016857	DIP2A (ENSPTIG00000001530) #23	S100B (ENSPTIG00000012836) #24
Cat	MODERN SPECIES	240	TSPEAR (ENSFCAG00000001772)	UBE2G2 (ENSFCAG00000042355) #7	ITGB2 (ENSFCAG00000002284) #10	SLX9 (ENSFCAG00000038348) #11	ADARB1 (ENSFCAG00000009665) #12	POFUT2 (ENSFCAG00000043455) #13	COL18A1 (ENSFCAG00000043124) #14	SLC19A1 (ENSFCAG00000026096) #15	PCBP3 (ENSFCAG00000014812)	COL6A1 (ENSFCAG00000014813)	COL6A2 (ENSFCAG00000014814) #17	FTCD (ENSFCAG00000014815) #18	SPATC1L (ENSFCAG00000014816) #19	LSS (ENSFCAG00000014817) #20	MCM3AP (ENSFCAG00000014818) #21	ENSFCAG00000032854 #22	CC2H21orf58 (ENSFCAG00000014819)	ENSFCAG00000052991	DIP2A (ENSFCAG00000014821) #23	S100B (ENSFCAG00000037747) #24	PRMT2 (ENSFCAG00000014823) #25	ENSFCAG00000050465
Caniformia	ANCESTRAL SPECIES		ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Canidae	ANCESTRAL SPECIES	39	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.i #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A #26
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.i #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00960000186612.A.h #26
Dingo	MODERN SPECIES	63	ENSCAFG00020019434 #8	PTTG1IP (ENSCAFG00020019438) #9	ITGB2 (ENSCAFG00020019439) #10	SLX9 (ENSCAFG00020019440) #11	ADARB1 (ENSCAFG00020019446) #12	POFUT2 (ENSCAFG00020019455) #13	ENSCAFG00020019463 #14	SLC19A1 (ENSCAFG00020019465) #15	ENSCAFG00020019472 #16	ENSCAFG00020019481	COL6A2 (ENSCAFG00020019491) #17	FTCD (ENSCAFG00020019496) #18	SPATC1L (ENSCAFG00020019504) #19	LSS (ENSCAFG00020019508) #20	MCM3AP (ENSCAFG00020019509) #21	YBEY (ENSCAFG00020019514) #22	PCNT (ENSCAFG00020019525)	DIP2A (ENSCAFG00020019589) #23	S100B (ENSCAFG00020020683) #24	ENSCAFG00020020694 #25	ENSCAFG00020020719 #26
Dog	MODERN SPECIES	24	ENSCAFG00845021390 ##8	PTTG1IP (ENSCAFG00845021456) #9	ITGB2 (ENSCAFG00845021592) #10	SLX9 (ENSCAFG00845021885) #11	ADARB1 (ENSCAFG00845021975) #12	POFUT2 (ENSCAFG00845022063) #13	COL18A1 (ENSCAFG00845022231) #14	ENSCAFG00845023388 #15	PCBP3 (ENSCAFG00845023560)	COL6A1 (ENSCAFG00845024031)	COL6A2 (ENSCAFG00845024255) #17	FTCD (ENSCAFG00845024727) #18	SPATC1L (ENSCAFG00845024849) #19	LSS (ENSCAFG00845024919) #20	MCM3AP (ENSCAFG00845025335) #21	ENSCAFG00845026433 #22	PCNT (ENSCAFG00845026638)	DIP2A (ENSCAFG00845027435) #23	ENSCAFG00845027798 #25
Red fox	MODERN SPECIES	209	ENSVVUG00000023925 #8	PTTG1IP (ENSVVUG00000023922) #9	ENSVVUG00000023920 #10	ENSVVUG00000023917 #10	ENSVVUG00000023915 #11	ADARB1 (ENSVVUG00000023911) #12	POFUT2 (ENSVVUG00000023908) #13	SLC19A1 (ENSVVUG00000023875) #15	PCBP3 (ENSVVUG00000023862)	ENSVVUG00000023855	COL6A2 (ENSVVUG00000023847) #17	FTCD (ENSVVUG00000023843) #18	SPATC1L (ENSVVUG00000023836) #19	LSS (ENSVVUG00000023711) #20	MCM3AP (ENSVVUG00000022975) #21	YBEY (ENSVVUG00000022948) #22	PCNT (ENSVVUG00000022919)	DIP2A (ENSVVUG00000020602) #23	S100B (ENSVVUG00000020498) #24	PRMT2 (ENSVVUG00000020492) #25
Caniformia_b	ANCESTRAL SPECIES		ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Ursidae	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Ursus	ANCESTRAL SPECIES	94	ENSGT00940000161526.a.a	ENSGT00940000158193 #7	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000162185	ENSGT00950000183546	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a.m #23	ENSGT00530000064552	ENSGT00940000160683 #25
American black bear	MODERN SPECIES	1811													SPATC1L (ENSUAMG00000002867) #19	LSS (ENSUAMG00000002834) #20	MCM3AP (ENSUAMG00000002814) #21	YBEY (ENSUAMG00000002808) #22
Polar bear	MODERN SPECIES	394	ENSUMAG00000025421	UBE2G2 (ENSUMAG00000025420) #7	ENSUMAG00000025419 ##8	PTTG1IP (ENSUMAG00000025418) #9	ITGB2 (ENSUMAG00000025417) #10	SLX9 (ENSUMAG00000025416) #11	ADARB1 (ENSUMAG00000025411) #12	POFUT2 (ENSUMAG00000025410) #13	PCBP3 (ENSUMAG00000025403)	ENSUMAG00000025402	COL6A2 (ENSUMAG00000025399) #17	FTCD (ENSUMAG00000025398) #18	ENSUMAG00000025397 #19	LSS (ENSUMAG00000025396) #20	MCM3AP (ENSUMAG00000025237) #21	YBEY (ENSUMAG00000025236) #22	PCNT (ENSUMAG00000025235)	DIP2A (ENSUMAG00000025037) #23	ENSUMAG00000025034	PRMT2 (ENSUMAG00000025033) #25
Giant Panda	MODERN SPECIES		ENSAMEG00000025067 #9	ITGB2 (ENSAMEG00000001924) #10	ENSAMEG00000001918 #11	ADARB1 (ENSAMEG00000001885) #12	ENSAMEG00000025761 #13	ENSAMEG00000001853 #13	COL18A1 (ENSAMEG00000001767) #14	SLC19A1 (ENSAMEG00000001754) #15	PCBP3 (ENSAMEG00000001697)	COL6A1 (ENSAMEG00000001581)	COL6A2 (ENSAMEG00000001501) #17	FTCD (ENSAMEG00000001451) #18	SPATC1L (ENSAMEG00000001442) #19	LSS (ENSAMEG00000001378) #20	MCM3AP (ENSAMEG00000001319) #21	YBEY (ENSAMEG00000001317) #22	DIP2A (ENSAMEG00000001136) #23	S100B (ENSAMEG00000001133) #24	ENSAMEG00000031399 #25	ENSAMEG00000025036 ##23	ENSAMEG00000027833	ENSAMEG00000005298
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
American mink	MODERN SPECIES	122	ITGB2 (ENSNVIG00000007863) #10	SLX9 (ENSNVIG00000008023) #11	ADARB1 (ENSNVIG00000008112) #12	ENSNVIG00000008191 #13	ENSNVIG00000008211 #13	ENSNVIG00000008220 #13	ENSNVIG00000008255 #14	ENSNVIG00000008290	PCBP3 (ENSNVIG00000008330)	COL6A1 (ENSNVIG00000008572)	ENSNVIG00000008753 #17	FTCD (ENSNVIG00000008760) #18	SPATC1L (ENSNVIG00000008811) #19	LSS (ENSNVIG00000008849) #20	MCM3AP (ENSNVIG00000008876) #21	YBEY (ENSNVIG00000008998) #22	ENSNVIG00000009125	DIP2A (ENSNVIG00000009214) #23	S100B (ENSNVIG00000009347) #24	PRMT2 (ENSNVIG00000009362) #25
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Primates	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00950000182895.a.b.j.b ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00950000182895.a.b.j.b ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00950000182895.a.b.j.b ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Vervet Monkey	MODERN SPECIES	11	ENSCSAG00000000274	ENSCSAG00000007491	ADARB1 (ENSCSAG00000007489) #12	POFUT2 (ENSCSAG00000007479) #13	ENSCSAG00000007471	SLC19A1 (ENSCSAG00000007456) #15	ENSCSAG00000007440 #16	ENSCSAG00000007430	ENSCSAG00000007424	ENSCSAG00000007389	COL6A2 (ENSCSAG00000007240) #17	FTCD (ENSCSAG00000007233) #18	SPATC1L (ENSCSAG00000007226) #19	LSS (ENSCSAG00000007209) #20	MCM3AP (ENSCSAG00000007194) #21	YBEY (ENSCSAG00000007183) #22	C21orf58 (ENSCSAG00000007179)	PCNT (ENSCSAG00000007152)	DIP2A (ENSCSAG00000007091) #23	S100B (ENSCSAG00000007071) #24	PRMT2 (ENSCSAG00000007062) #25
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00950000182895.a.b.j.b.f ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00950000182895.a.b.j.b.f ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00950000182895.a.b.j.b.f ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Rhesus	MODERN SPECIES	13	SLX9 (ENSMMUG00000000953) #11	ENSMMUG00000061023	ADARB1 (ENSMMUG00000010695) #12	POFUT2 (ENSMMUG00000010700) #13	COL18A1 (ENSMMUG00000004472) #14	SLC19A1 (ENSMMUG00000004477) #15	PCBP3 (ENSMMUG00000003825)	COL6A1 (ENSMMUG00000000544)	ENSMMUG00000055486	COL6A2 (ENSMMUG00000022317) #17	FTCD (ENSMMUG00000022324) #18	SPATC1L (ENSMMUG00000058335) #19	ENSMMUG00000064313	LSS (ENSMMUG00000022329) #20	MCM3AP (ENSMMUG00000022331) #21	YBEY (ENSMMUG00000012911) #22	C3H21orf58 (ENSMMUG00000039473)	PCNT (ENSMMUG00000012914)	DIP2A (ENSMMUG00000015797) #23	S100B (ENSMMUG00000063077) #24	PRMT2 (ENSMMUG00000015803) #25	ENSMMUG00000053532
Crab-eating macaque	MODERN SPECIES	13	PTTG1IP (ENSMFAG00000033191) #9	ITGB2 (ENSMFAG00000036141) #10	SLX9 (ENSMFAG00000037615) #11	ADARB1 (ENSMFAG00000011312) #12	ENSMFAG00000003616 #13	SLC19A1 (ENSMFAG00000041513) #15	ENSMFAG00000056786	ENSMFAG00000053223	PCBP3 (ENSMFAG00000034574)	ENSMFAG00000003504	ENSMFAG00000060948	FTCD (ENSMFAG00000039806) #18	SPATC1L (ENSMFAG00000031624) #19	LSS (ENSMFAG00000034060) #20	MCM3AP (ENSMFAG00000041104) #21	ENSMFAG00000014564 #22	C21orf58 (ENSMFAG00000041495)	ENSMFAG00000059298	ENSMFAG00000047423	DIP2A (ENSMFAG00000034305) #23	ENSMFAG00000053934	ENSMFAG00000033124	PRMT2 (ENSMFAG00000003831) #25	ENSMFAG00000056988
Pig-tailed macaque	MODERN SPECIES	503	ENSMNEG00000045199 #8	PTTG1IP (ENSMNEG00000030046) #9	ITGB2 (ENSMNEG00000031016) #10	SLX9 (ENSMNEG00000044629) #11	ADARB1 (ENSMNEG00000031543) #12	POFUT2 (ENSMNEG00000041753) #13	COL18A1 (ENSMNEG00000032048) #14	SLC19A1 (ENSMNEG00000029970) #15	PCBP3 (ENSMNEG00000035551)	COL6A1 (ENSMNEG00000043587)	COL6A2 (ENSMNEG00000035628) #17	FTCD (ENSMNEG00000045053) #18	SPATC1L (ENSMNEG00000028822) #19	LSS (ENSMNEG00000044250) #20	MCM3AP (ENSMNEG00000029780) #21	YBEY (ENSMNEG00000039114) #22	C21orf58 (ENSMNEG00000029851)	PCNT (ENSMNEG00000036330)	DIP2A (ENSMNEG00000040653) #23	ENSMNEG00000034764	PRMT2 (ENSMNEG00000038764) #25
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00950000182895.a.b.j.a.a ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Olive baboon	MODERN SPECIES	14	ENSPANG00000031359 #8	PTTG1IP (ENSPANG00000005642) #9	ITGB2 (ENSPANG00000023629) #10	SLX9 (ENSPANG00000021083) #11	ADARB1 (ENSPANG00000020871) #12	POFUT2 (ENSPANG00000023630) #13	SLC19A1 (ENSPANG00000017097) #15	PCBP3 (ENSPANG00000023631)	ENSPANG00000022692	ENSPANG00000048117	COL6A2 (ENSPANG00000024175) #17	FTCD (ENSPANG00000008270) #18	SPATC1L (ENSPANG00000017098) #19	LSS (ENSPANG00000019152) #20	MCM3AP (ENSPANG00000024225) #21	YBEY (ENSPANG00000024224) #22	C21orf58 (ENSPANG00000024223)	ENSPANG00000049667	PCNT (ENSPANG00000008159)	DIP2A (ENSPANG00000022431) #23	S100B (ENSPANG00000042633) #24	PRMT2 (ENSPANG00000019949) #25	ENSPANG00000045615	ENSPANG00000047026
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00950000182895.a.b.j.a.a ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00530000064552	ENSGT00940000160683 #25
Drill	MODERN SPECIES	1221									PCBP3 (ENSMLEG00000038785)	COL6A1 (ENSMLEG00000029822)	COL6A2 (ENSMLEG00000017555) #17	FTCD (ENSMLEG00000008656) #18	SPATC1L (ENSMLEG00000028783) #19	LSS (ENSMLEG00000033329) #20	MCM3AP (ENSMLEG00000041901) #21	YBEY (ENSMLEG00000034149) #22	ENSMLEG00000033463	PCNT (ENSMLEG00000036135)	DIP2A (ENSMLEG00000040859) #23	ENSMLEG00000030850	PRMT2 (ENSMLEG00000041912) #25	ENSMLEG00000043464	ENSMLEG00000032551
Sooty mangabey	MODERN SPECIES	465	ENSCATG00000041498 #8	PTTG1IP (ENSCATG00000033867) #9	ITGB2 (ENSCATG00000039608) #10	SLX9 (ENSCATG00000019293) #11	ADARB1 (ENSCATG00000029876) #12	POFUT2 (ENSCATG00000034952) #13	COL18A1 (ENSCATG00000038222) #14	SLC19A1 (ENSCATG00000036905) #15	PCBP3 (ENSCATG00000038419)	COL6A1 (ENSCATG00000040431)	COL6A2 (ENSCATG00000041547) #17	FTCD (ENSCATG00000041690) #18	SPATC1L (ENSCATG00000037303) #19	LSS (ENSCATG00000038397) #20	MCM3AP (ENSCATG00000039155) #21	YBEY (ENSCATG00000035660) #22	C21orf58 (ENSCATG00000007258)	PCNT (ENSCATG00000040523)	DIP2A (ENSCATG00000025334) #23	ENSCATG00000037851	PRMT2 (ENSCATG00000031360) #25
Rhinopithecus	ANCESTRAL SPECIES	210	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162768.B #16	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00530000064552	ENSGT00940000160683 #25
Golden snub-nosed monkey	MODERN SPECIES	1482				SLX9 (ENSRROG00000045309) #11	ADARB1 (ENSRROG00000042856) #12	POFUT2 (ENSRROG00000036833) #13	COL18A1 (ENSRROG00000041309) #14	SLC19A1 (ENSRROG00000032854) #15	PCBP3 (ENSRROG00000034567)	COL6A1 (ENSRROG00000034310)	COL6A2 (ENSRROG00000038780) #17	FTCD (ENSRROG00000045071) #18	SPATC1L (ENSRROG00000030883) #19	LSS (ENSRROG00000040461) #20	MCM3AP (ENSRROG00000006150) #21	YBEY (ENSRROG00000039507) #22	C21orf58 (ENSRROG00000043985)	PCNT (ENSRROG00000034301)	DIP2A (ENSRROG00000034962) #23	ENSRROG00000029645	PRMT2 (ENSRROG00000041142) #25
Black snub-nosed monkey	MODERN SPECIES	1318												FTCD (ENSRBIG00000039978) #18	SPATC1L (ENSRBIG00000027898) #19	LSS (ENSRBIG00000031749) #20	MCM3AP (ENSRBIG00000031129) #21	YBEY (ENSRBIG00000032496) #22	C21orf58 (ENSRBIG00000044610)	PCNT (ENSRBIG00000035911)	DIP2A (ENSRBIG00000040181) #23	ENSRBIG00000029838	PRMT2 (ENSRBIG00000040835) #25
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000018577	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Hominidae	ANCESTRAL SPECIES	25	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000018577	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709.f #11	ENSGT00390000018577	ENSGT00390000015709.e.a #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Gorilla	MODERN SPECIES	12	PTTG1IP (ENSGGOG00000002077) #9	ITGB2 (ENSGGOG00000014457) #10	ENSGGOG00000014477	ENSGGOG00000014482 #11	ADARB1 (ENSGGOG00000013244) #12	POFUT2 (ENSGGOG00000015065) #13	ENSGGOG00000011704 #14	SLC19A1 (ENSGGOG00000011734) #15	PCBP3 (ENSGGOG00000003683)	COL6A1 (ENSGGOG00000001462)	COL6A2 (ENSGGOG00000003661) #17	FTCD (ENSGGOG00000002869) #18	SPATC1L (ENSGGOG00000012943) #19	LSS (ENSGGOG00000015701) #20	MCM3AP (ENSGGOG00000015716) #21	YBEY (ENSGGOG00000015733) #22	C21orf58 (ENSGGOG00000041767)	PCNT (ENSGGOG00000011788)	DIP2A (ENSGGOG00000011841) #23	ENSGGOG00000027399	PRMT2 (ENSGGOG00000010719) #25
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709.f #11	ENSGT00390000018577	ENSGT00390000015709.e.a #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Human	MODERN SPECIES	13	SUMO3 (ENSG00000184900) ##8	PTTG1IP (ENSG00000183255) #9	ITGB2 (ENSG00000160255) #10	SLX9 (ENSG00000160256) #11	ADARB1 (ENSG00000197381) #12	POFUT2 (ENSG00000186866) #13	COL18A1 (ENSG00000182871) #14	SLC19A1 (ENSG00000173638) #15	PCBP3 (ENSG00000183570)	COL6A1 (ENSG00000142156)	COL6A2 (ENSG00000142173) #17	FTCD (ENSG00000160282) #18	SPATC1L (ENSG00000160284) #19	LSS (ENSG00000160285) #20	MCM3AP (ENSG00000160294) #21	YBEY (ENSG00000182362) #22	C21orf58 (ENSG00000160298)	PCNT (ENSG00000160299)	ENSG00000286224	DIP2A (ENSG00000160305) #23	S100B (ENSG00000160307) #24	PRMT2 (ENSG00000160310) #25
Pan	ANCESTRAL SPECIES	27	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000018577	ENSGT00390000015709.e.a.a #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00530000064552	ENSGT00940000160683 #25
Chimpanzee	MODERN SPECIES	12	PTTG1IP (ENSPTRG00000013992) #9	ITGB2 (ENSPTRG00000013993) #10	ENSPTRG00000013994	SLX9 (ENSPTRG00000013995) #11	ADARB1 (ENSPTRG00000013997) #12	POFUT2 (ENSPTRG00000014001) #13	COL18A1 (ENSPTRG00000014005) #14	SLC19A1 (ENSPTRG00000031409) #15	PCBP3 (ENSPTRG00000014010)	COL6A2 (ENSPTRG00000014014) #17	ENSPTRG00000049395 #17	ENSPTRG00000047921	SPATC1L (ENSPTRG00000014016) #19	LSS (ENSPTRG00000014017) #20	MCM3AP (ENSPTRG00000014019) #21	YBEY (ENSPTRG00000014021) #22	C21H21orf58 (ENSPTRG00000014022)	PCNT (ENSPTRG00000014023)	DIP2A (ENSPTRG00000014025) #23	S100B (ENSPTRG00000014026)	PRMT2 (ENSPTRG00000014027) #25
Bonobo	MODERN SPECIES	12	PTTG1IP (ENSPPAG00000032064) #9	ITGB2 (ENSPPAG00000033785) #10	ENSPPAG00000034706	ENSPPAG00000034875 #11	ADARB1 (ENSPPAG00000027139) #12	POFUT2 (ENSPPAG00000035189) #13	ENSPPAG00000014049 #14	SLC19A1 (ENSPPAG00000027716) #15	PCBP3 (ENSPPAG00000021940)	COL6A1 (ENSPPAG00000027819)	COL6A2 (ENSPPAG00000029776) #17	FTCD (ENSPPAG00000032812) #18	SPATC1L (ENSPPAG00000034632) #19	LSS (ENSPPAG00000035048) #20	MCM3AP (ENSPPAG00000025048) #21	YBEY (ENSPPAG00000030933) #22	C21orf58 (ENSPPAG00000031586)	PCNT (ENSPPAG00000034343)	DIP2A (ENSPPAG00000038882) #23	ENSPPAG00000030816	PRMT2 (ENSPPAG00000035050) #25
Orangutan	MODERN SPECIES	12	PTTG1IP (ENSPPYG00000036754) #9	ITGB2 (ENSPPYG00000011506) #10	ENSPPYG00000031942	SLX9 (ENSPPYG00000011509) #11	ADARB1 (ENSPPYG00000011514) #12	POFUT2 (ENSPPYG00000011516) #13	ENSPPYG00000011521 #14	SLC19A1 (ENSPPYG00000011523) #15	PCBP3 (ENSPPYG00000011525)	COL6A1 (ENSPPYG00000034634)	COL6A2 (ENSPPYG00000011527) #17	FTCD (ENSPPYG00000011528) #18	SPATC1L (ENSPPYG00000011529) #19	LSS (ENSPPYG00000011530) #20	MCM3AP (ENSPPYG00000011532) #21	ENSPPYG00000011535 #22	C21orf58 (ENSPPYG00000011536)	PCNT (ENSPPYG00000011537)	DIP2A (ENSPPYG00000011538) #23	S100B (ENSPPYG00000011539) #24	PRMT2 (ENSPPYG00000011540) #25
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Cebidae	ANCESTRAL SPECIES	32	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00530000064552	ENSGT00940000160683 #25
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00950000182895.a.a.a.b.f #8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00530000064552	ENSGT00940000160683 #25
Capuchin	MODERN SPECIES	112	ENSCCAG00000024614 #8	PTTG1IP (ENSCCAG00000030590) #9	ITGB2 (ENSCCAG00000001137) #10	SLX9 (ENSCCAG00000036236) #11	ADARB1 (ENSCCAG00000029934) #12	POFUT2 (ENSCCAG00000020926) #13	COL18A1 (ENSCCAG00000036606) #14	SLC19A1 (ENSCCAG00000026323) #15	PCBP3 (ENSCCAG00000024561)	COL6A1 (ENSCCAG00000028601)	COL6A2 (ENSCCAG00000027356) #17	FTCD (ENSCCAG00000009041) #18	SPATC1L (ENSCCAG00000030470) #19	LSS (ENSCCAG00000022848) #20	MCM3AP (ENSCCAG00000032869) #21	YBEY (ENSCCAG00000035845) #22	C21orf58 (ENSCCAG00000032298)	PCNT (ENSCCAG00000036461)	DIP2A (ENSCCAG00000026675) #23	ENSCCAG00000016321	PRMT2 (ENSCCAG00000028685) #25	ENSCCAG00000027671
Bolivian squirrel monkey	MODERN SPECIES	155	ENSSBOG00000022415	COLEC11 (ENSSBOG00000026886)	ALLC (ENSSBOG00000025429)	DCDC2C (ENSSBOG00000023428)	ENSSBOG00000021838	POFUT2 (ENSSBOG00000026751) #13	COL18A1 (ENSSBOG00000026331) #14	SLC19A1 (ENSSBOG00000024098) #15	PCBP3 (ENSSBOG00000005789)	COL6A1 (ENSSBOG00000033262)	COL6A2 (ENSSBOG00000024612) #17	FTCD (ENSSBOG00000032120) #18	SPATC1L (ENSSBOG00000028722) #19	LSS (ENSSBOG00000030101) #20	MCM3AP (ENSSBOG00000024259) #21	YBEY (ENSSBOG00000030954) #22	ENSSBOG00000029549	PCNT (ENSSBOG00000031686)	ENSSBOG00000034552	DIP2A (ENSSBOG00000027645) #23	ENSSBOG00000027563	PRMT2 (ENSSBOG00000030953) #25
Marmoset	MODERN SPECIES	13	ITGB2 (ENSCJAG00000010554) #10	SLX9 (ENSCJAG00000010599) #11	ENSCJAG00000071675	ADARB1 (ENSCJAG00000018646) #12	ENSCJAG00000081850 #13	COL18A1 (ENSCJAG00000083421) #14	ENSCJAG00000081985	SLC19A1 (ENSCJAG00000001943) #15	PCBP3 (ENSCJAG00000077507)	COL6A1 (ENSCJAG00000078346)	COL6A2 (ENSCJAG00000001863) #17	FTCD (ENSCJAG00000080609) #18	SPATC1L (ENSCJAG00000085076) #19	LSS (ENSCJAG00000086602) #20	MCM3AP (ENSCJAG00000001770) #21	YBEY (ENSCJAG00000080541) #22	ENSCJAG00000001809	PCNT (ENSCJAG00000075934)	DIP2A (ENSCJAG00000001624) #23	ENSCJAG00000001606	PRMT2 (ENSCJAG00000001571) #25	ENSCJAG00000074974
Mas night monkey	MODERN SPECIES	1200																YBEY (ENSANAG00000021957) #22	C21orf58 (ENSANAG00000027423)	PCNT (ENSANAG00000023500)	DIP2A (ENSANAG00000021722) #23	S100B (ENSANAG00000019592) #24	PRMT2 (ENSANAG00000030484) #25
Tarsier	MODERN SPECIES	3858										COL6A1 (ENSTSYG00000014354)	COL6A2 (ENSTSYG00000002945) #17	FTCD (ENSTSYG00000001539) #18	SPATC1L (ENSTSYG00000006728) #19	LSS (ENSTSYG00000005870) #20	MCM3AP (ENSTSYG00000007422) #21	YBEY (ENSTSYG00000013467) #22
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Lemuriformes	ANCESTRAL SPECIES	88	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Lemuriformes_a	ANCESTRAL SPECIES	181	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b.s #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000173680	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Greater bamboo lemur	MODERN SPECIES	646															MCM3AP (ENSPSMG00000005342) #21	YBEY (ENSPSMG00000005292) #22	ENSPSMG00000005278	PCNT (ENSPSMG00000005262)	DIP2A (ENSPSMG00000005174) #23	S100B (ENSPSMG00000005022) #24	ENSPSMG00000005019	PRMT2 (ENSPSMG00000004935) #25
Coquerels sifaka	MODERN SPECIES	543	ENSPCOG00000019098 ##8	PTTG1IP (ENSPCOG00000020581) #9	ITGB2 (ENSPCOG00000014923) #10	SLX9 (ENSPCOG00000020078) #11	ADARB1 (ENSPCOG00000020406) #12	POFUT2 (ENSPCOG00000016074) #13	COL18A1 (ENSPCOG00000014698) #14	SLC19A1 (ENSPCOG00000027927) #15	PCBP3 (ENSPCOG00000013797)	COL6A1 (ENSPCOG00000014806)	COL6A2 (ENSPCOG00000016356) #17	FTCD (ENSPCOG00000021020) #18	SPATC1L (ENSPCOG00000025023) #19	LSS (ENSPCOG00000019936) #20	MCM3AP (ENSPCOG00000024498) #21	YBEY (ENSPCOG00000015606) #22	PCNT (ENSPCOG00000014872)	DIP2A (ENSPCOG00000016283) #23	S100B (ENSPCOG00000018301) #24	PRMT2 (ENSPCOG00000028679) #25
Mouse lemur	MODERN SPECIES	24	SUMO3 (ENSMICG00000036688) ##8	PTTG1IP (ENSMICG00000028388) #9	ITGB2 (ENSMICG00000002984) #10	SLX9 (ENSMICG00000047718) #11	ADARB1 (ENSMICG00000008433) #12	POFUT2 (ENSMICG00000035479) #13	COL18A1 (ENSMICG00000037125) #14	SLC19A1 (ENSMICG00000035898) #15	PCBP3 (ENSMICG00000012679)	ENSMICG00000033569	COL6A2 (ENSMICG00000033173) #17	FTCD (ENSMICG00000002458) #18	SPATC1L (ENSMICG00000027207) #19	LSS (ENSMICG00000004051) #20	MCM3AP (ENSMICG00000000801) #21	YBEY (ENSMICG00000000809) #22	ENSMICG00000047063	PCNT (ENSMICG00000000816)	DIP2A (ENSMICG00000047083) #23	S100B (ENSMICG00000038064) #24	PRMT2 (ENSMICG00000015531) #25	ENSMICG00000033410	ENSMICG00000046801	ENSMICG00000046990	ENSMICG00000047484	ENSMICG00000046324
Bushbaby	MODERN SPECIES	243	ENSOGAG00000027833	ENSOGAG00000026126	ADARB1 (ENSOGAG00000017167) #12	POFUT2 (ENSOGAG00000017168) #13	ENSOGAG00000024946	COL18A1 (ENSOGAG00000000892) #14	SLC19A1 (ENSOGAG00000032361) #15	ENSOGAG00000008044 #16	ENSOGAG00000024419	COL6A1 (ENSOGAG00000031247)	COL6A2 (ENSOGAG00000005077) #17	FTCD (ENSOGAG00000008226) #18	SPATC1L (ENSOGAG00000008230) #19	LSS (ENSOGAG00000009183) #20	MCM3AP (ENSOGAG00000009196) #21	YBEY (ENSOGAG00000029299) #22	PCNT (ENSOGAG00000001796)	DIP2A (ENSOGAG00000013139) #23	PRMT2 (ENSOGAG00000013155) #25
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Tree shrew	MODERN SPECIES	2055										COL6A2 (ENSTBEG00000015302) #17	FTCD (ENSTBEG00000015952) #18	SPATC1L (ENSTBEG00000016200) #19	LSS (ENSTBEG00000016213) #20	MCM3AP (ENSTBEG00000016484) #21	ENSTBEG00000016787	YBEY (ENSTBEG00000016856) #22	ENSTBEG00000016931
Glires	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Lagomorpha	ANCESTRAL SPECIES	266														ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Rabbit	MODERN SPECIES	5												ENSOCUG00000000409 #17	ENSOCUG00000026058	LSS (ENSOCUG00000001938) #20	MCM3AP (ENSOCUG00000004784) #21	YBEY (ENSOCUG00000027700) #22	ENSOCUG00000004797	PCNT (ENSOCUG00000004806)	DIP2A (ENSOCUG00000004831) #23	S100B (ENSOCUG00000001473) #24	PRMT2 (ENSOCUG00000016126) #25	ENSOCUG00000028055	ENSOCUG00000017611	GTPBP6 (ENSOCUG00000008245)	PLCXD1 (ENSOCUG00000025223)	OLIG1 (ENSOCUG00000027389)	C21orf62 (ENSOCUG00000007160)	SYNJ1 (ENSOCUG00000001420)	CFAP298 (ENSOCUG00000000461)	ENSOCUG00000012278	URB1 (ENSOCUG00000009381)
Pika	MODERN SPECIES	2600															MCM3AP (ENSOPRG00000014690) #21	ENSOPRG00000014733 #22	ENSOPRG00000014740
Rodentia	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Kangaroo rat	MODERN SPECIES	478	Sumo3 (ENSDORG00000025904) ##8	Pttg1ip (ENSDORG00000028984) #9	ENSDORG00000012531 #10	Fam207a (ENSDORG00000028131) #11	Adarb1 (ENSDORG00000000619) #12	Pofut2 (ENSDORG00000009350) #13	ENSDORG00000011477	Slc19a1 (ENSDORG00000008087) #15	Pcbp3 (ENSDORG00000003640)	ENSDORG00000004103	Col6a2 (ENSDORG00000028732) #17	Ftcd (ENSDORG00000004547) #18	Spatc1l (ENSDORG00000010414) #19	Lss (ENSDORG00000010415) #20	Mcm3ap (ENSDORG00000004416) #21	Ybey (ENSDORG00000024242) #22	ENSDORG00000007242	Pcnt (ENSDORG00000007244)	ENSDORG00000027954	Dip2a (ENSDORG00000012447) #23	S100b (ENSDORG00000013831) #24
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Muroidea	ANCESTRAL SPECIES	11	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b	ENSGT00940000155608	ENSGT00940000162786
Golden Hamster	MODERN SPECIES	641	ENSMAUG00000021821 #10	Fam207a (ENSMAUG00000009365) #11	Adarb1 (ENSMAUG00000009334) #12	Pofut2 (ENSMAUG00000006922) #13	Col18a1 (ENSMAUG00000008076) #14	Slc19a1 (ENSMAUG00000007979) #15	ENSMAUG00000012520	Pcbp3 (ENSMAUG00000007036)	ENSMAUG00000020615	Col6a2 (ENSMAUG00000022073) #17	Ftcd (ENSMAUG00000004152) #18	Spatc1l (ENSMAUG00000006869) #19	Lss (ENSMAUG00000005365) #20	Mcm3ap (ENSMAUG00000008393) #21	ENSMAUG00000002217	Ybey (ENSMAUG00000005858) #22	2610028H24Rik (ENSMAUG00000009720)	Pcnt (ENSMAUG00000022248)	Dip2a (ENSMAUG00000018650) #23	S100b (ENSMAUG00000015774) #24	Prmt2 (ENSMAUG00000017688) #25	Slc5a4a (ENSMAUG00000019866)	Zfp280b (ENSMAUG00000015647)	ENSMAUG00000011759	Vpreb3 (ENSMAUG00000010815)	Chchd10 (ENSMAUG00000012109)	Mmp11 (ENSMAUG00000012311)	Smarcb1 (ENSMAUG00000021023)	Derl3 (ENSMAUG00000016207)	ENSMAUG00000002603	Gstt4 (ENSMAUG00000010826)
Chinese hamster chok1gshd	MODERN SPECIES	204	Sumo3 (ENSCGRG00001014923) ##8	Pttg1ip (ENSCGRG00001000333) #9	Itgb2 (ENSCGRG00001016235) #10	Fam207a (ENSCGRG00001016236) #11	Adarb1 (ENSCGRG00001023922) #12	Pofut2 (ENSCGRG00001022765) #13	Col18a1 (ENSCGRG00001013369) #14	SLC19A1 (ENSCGRG00001016846) #15	Pcbp3 (ENSCGRG00001006836)	Col6a1 (ENSCGRG00001017421)	Col6a2 (ENSCGRG00001003342) #17	Ftcd (ENSCGRG00001011730) #18	Spatc1l (ENSCGRG00001017850) #19	Lss (ENSCGRG00001020282) #20	Mcm3ap (ENSCGRG00001015274) #21	Ybey (ENSCGRG00001022036) #22	2610028H24Rik (ENSCGRG00001023849)	Pcnt (ENSCGRG00001017614)	Dip2a (ENSCGRG00001004170) #23	ENSCGRG00001009479	Prmt2 (ENSCGRG00001010555) #25	ENSCGRG00001002616	ENSCGRG00001024447	Zfp280b (ENSCGRG00001011844)	ENSCGRG00001000305	Vpreb3 (ENSCGRG00001007138)	Chchd10 (ENSCGRG00001023480)	Mmp11 (ENSCGRG00001001274)	Smarcb1 (ENSCGRG00001013732)	Derl3 (ENSCGRG00001023562)	Mif (ENSCGRG00001002079)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b
Northern American deer mouse	MODERN SPECIES	13	ENSPEMG00000029963 ##8	Pttg1ip (ENSPEMG00000022833) #9	Itgb2 (ENSPEMG00000023793) #10	Fam207a (ENSPEMG00000029013) #11	Adarb1 (ENSPEMG00000022360) #12	Pofut2 (ENSPEMG00000021691) #13	Col18a1 (ENSPEMG00000019720) #14	Slc19a1 (ENSPEMG00000019847) #15	Pcbp3 (ENSPEMG00000000587)	Col6a1 (ENSPEMG00000011883)	Col6a2 (ENSPEMG00000023614) #17	Ftcd (ENSPEMG00000011905) #18	Spatc1l (ENSPEMG00000015524) #19	Lss (ENSPEMG00000024002) #20	Mcm3ap (ENSPEMG00000014754) #21	Ybey (ENSPEMG00000000492) #22	2610028H24Rik (ENSPEMG00000009493)	Pcnt (ENSPEMG00000012406)	Dip2a (ENSPEMG00000011906) #23	S100b (ENSPEMG00000024584) #24	Prmt2 (ENSPEMG00000016675) #25	Slc5a4a (ENSPEMG00000016494)	Slc5a4b (ENSPEMG00000018545)	Zfp280b (ENSPEMG00000023991)	Gm5134 (ENSPEMG00000017870)	Vpreb3 (ENSPEMG00000010214)	Gm867 (ENSPEMG00000025778)	Chchd10 (ENSPEMG00000000593)	Mmp11 (ENSPEMG00000011798)	Smarcb1 (ENSPEMG00000009146)	Derl3 (ENSPEMG00000001396)
Prairie vole	MODERN SPECIES	352	ENSMOCG00000021821 ##8	Pttg1ip (ENSMOCG00000020270) #9	Itgb2 (ENSMOCG00000022498) #10	Fam207a (ENSMOCG00000021449) #11	Adarb1 (ENSMOCG00000018324) #12	Pofut2 (ENSMOCG00000013158) #13	Col18a1 (ENSMOCG00000019606) #14	Slc19a1 (ENSMOCG00000008838) #15	Pcbp3 (ENSMOCG00000016127)	Col6a1 (ENSMOCG00000015635)	Col6a2 (ENSMOCG00000007120) #17	Ftcd (ENSMOCG00000013801) #18	Spatc1l (ENSMOCG00000012025) #19	Lss (ENSMOCG00000020263) #20	Mcm3ap (ENSMOCG00000018380) #21	Ybey (ENSMOCG00000012634) #22	2610028H24Rik (ENSMOCG00000022971)	Pcnt (ENSMOCG00000006875)	Dip2a (ENSMOCG00000015916) #23	S100b (ENSMOCG00000020304) #24	Prmt2 (ENSMOCG00000017602) #25	Slc5a4a (ENSMOCG00000003852)	Slc5a4b (ENSMOCG00000019990)	Zfp280b (ENSMOCG00000012097)	Gm5134 (ENSMOCG00000021314)	Vpreb3 (ENSMOCG00000008215)	Chchd10 (ENSMOCG00000010864)	Mmp11 (ENSMOCG00000020671)	Smarcb1 (ENSMOCG00000019899)	Derl3 (ENSMOCG00000017853)	Mif (ENSMOCG00000016316)
Murinae	ANCESTRAL SPECIES	18	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mus	ANCESTRAL SPECIES	15	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00900000143399	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00900000143399	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mouse	MODERN SPECIES	1	Sumo3 (ENSMUSG00000020265) ##8	Pttg1ip (ENSMUSG00000009291) #9	Itgb2 (ENSMUSG00000000290) #10	Fam207a (ENSMUSG00000032977) #11	Adarb1 (ENSMUSG00000020262) #12	Pofut2 (ENSMUSG00000020260) #13	Col18a1 (ENSMUSG00000001435) #14	Slc19a1 (ENSMUSG00000001436) #15	Pcbp3 (ENSMUSG00000001120)	Col6a1 (ENSMUSG00000001119)	Col6a2 (ENSMUSG00000020241) #17	Ftcd (ENSMUSG00000001155) #18	Spatc1l (ENSMUSG00000009115) #19	Lss (ENSMUSG00000033105) #20	Mcm3ap (ENSMUSG00000001150) #21	Ybey (ENSMUSG00000033126) #22	2610028H24Rik (ENSMUSG00000009114)	Gm56118 (ENSMUSG00000117965)	Pcnt (ENSMUSG00000001151)	Dip2a (ENSMUSG00000020231) #23	S100b (ENSMUSG00000033208) #24	Prmt2 (ENSMUSG00000020230) #25	Slc5a4a (ENSMUSG00000020229)	Slc5a4b (ENSMUSG00000020226)	Zfp280b (ENSMUSG00000049764)	Gm5134 (ENSMUSG00000033255)	Vpreb3 (ENSMUSG00000000903)	Gm867 (ENSMUSG00000050157)	Chchd10 (ENSMUSG00000049422)	Mmp11 (ENSMUSG00000000901)	Smarcb1 (ENSMUSG00000000902)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00900000143399	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b	ENSGT00940000155608.q.a.a.a.a
Steppe mouse	MODERN SPECIES	2997													ENSMSIG00000003212 #19	Lss (ENSMSIG00000003250) #20	Mcm3ap (ENSMSIG00000003384) #21	ENSMSIG00000003478 #22	2610028H24Rik (ENSMSIG00000003499)	Pcnt (ENSMSIG00000003573)	Dip2a (ENSMSIG00000004099) #23	S100b (ENSMSIG00000004765) #24	Prmt2 (ENSMSIG00000004778) #25	Slc5a4a (ENSMSIG00000004850)	Slc5a4b (ENSMSIG00000004902)	ENSMSIG00000004952	Gm5134 (ENSMSIG00000004960)	Vpreb3 (ENSMSIG00000005055)	Mmp11 (ENSMSIG00000005065)	Smarcb1 (ENSMSIG00000005155)	Derl3 (ENSMSIG00000005221)	ENSMSIG00000005270	Gstt2 (ENSMSIG00000005282)
spretus	MODERN SPECIES	1	Itgb2 (MGP_SPRETEiJ_G0016296) #10	Fam207a (MGP_SPRETEiJ_G0016295) #11	Adarb1 (MGP_SPRETEiJ_G0016294) #12	Pofut2 (MGP_SPRETEiJ_G0016293) #13	MGP_SPRETEiJ_G0016292	Col18a1 (MGP_SPRETEiJ_G0016291) #14	Slc19a1 (MGP_SPRETEiJ_G0016290) #15	MGP_SPRETEiJ_G0016289	Pcbp3 (MGP_SPRETEiJ_G0016288)	Col6a1 (MGP_SPRETEiJ_G0016287)	Col6a2 (MGP_SPRETEiJ_G0016286) #17	Ftcd (MGP_SPRETEiJ_G0016285) #18	Spatc1l (MGP_SPRETEiJ_G0016284) #19	Lss (MGP_SPRETEiJ_G0016283) #20	Mcm3ap (MGP_SPRETEiJ_G0016282) #21	Ybey (MGP_SPRETEiJ_G0016281) #22	2610028H24Rik (MGP_SPRETEiJ_G0016280)	Pcnt (MGP_SPRETEiJ_G0016279)	MGP_SPRETEiJ_G0016278 #23	S100b (MGP_SPRETEiJ_G0016277) #24	Prmt2 (MGP_SPRETEiJ_G0016276) #25	Slc5a4a (MGP_SPRETEiJ_G0016275)	Slc5a4b (MGP_SPRETEiJ_G0016274)	Zfp280b (MGP_SPRETEiJ_G0016273)	Gm5134 (MGP_SPRETEiJ_G0016272)	Vpreb3 (MGP_SPRETEiJ_G0016271)	Chchd10 (MGP_SPRETEiJ_G0016270)	Mmp11 (MGP_SPRETEiJ_G0016269)	Smarcb1 (MGP_SPRETEiJ_G0016268)	Derl3 (MGP_SPRETEiJ_G0016267)	Mif (MGP_SPRETEiJ_G0016266)
Ryukyu mouse	MODERN SPECIES	1	Itgb2 (MGP_CAROLIEiJ_G0015483) #10	Fam207a (MGP_CAROLIEiJ_G0015482) #11	Adarb1 (MGP_CAROLIEiJ_G0015481) #12	Pofut2 (MGP_CAROLIEiJ_G0015480) #13	MGP_CAROLIEiJ_G0015479	Col18a1 (MGP_CAROLIEiJ_G0015478) #14	Slc19a1 (MGP_CAROLIEiJ_G0015477) #15	MGP_CAROLIEiJ_G0015476	Pcbp3 (MGP_CAROLIEiJ_G0015475)	Col6a1 (MGP_CAROLIEiJ_G0015474)	Col6a2 (MGP_CAROLIEiJ_G0015473) #17	Ftcd (MGP_CAROLIEiJ_G0015472) #18	Spatc1l (MGP_CAROLIEiJ_G0015471) #19	Lss (MGP_CAROLIEiJ_G0015470) #20	Mcm3ap (MGP_CAROLIEiJ_G0015469) #21	Ybey (MGP_CAROLIEiJ_G0015468) #22	2610028H24Rik (MGP_CAROLIEiJ_G0015467)	Pcnt (MGP_CAROLIEiJ_G0015466)	Dip2a (MGP_CAROLIEiJ_G0015465) #23	S100b (MGP_CAROLIEiJ_G0015464) #24	Prmt2 (MGP_CAROLIEiJ_G0015463) #25	Slc5a4a (MGP_CAROLIEiJ_G0015462)	Slc5a4b (MGP_CAROLIEiJ_G0015461)	Zfp280b (MGP_CAROLIEiJ_G0015460)	Gm5134 (MGP_CAROLIEiJ_G0015459)	Vpreb3 (MGP_CAROLIEiJ_G0015458)	Chchd10 (MGP_CAROLIEiJ_G0015457)	Mmp11 (MGP_CAROLIEiJ_G0015456)	Smarcb1 (MGP_CAROLIEiJ_G0015455)	Derl3 (MGP_CAROLIEiJ_G0015454)	Mif (MGP_CAROLIEiJ_G0015453)
Shrew mouse	MODERN SPECIES	22	Pttg1ip (MGP_PahariEiJ_G0030897) #9	Itgb2 (MGP_PahariEiJ_G0030896) #10	Fam207a (MGP_PahariEiJ_G0030895) #11	Adarb1 (MGP_PahariEiJ_G0030894) #12	Pofut2 (MGP_PahariEiJ_G0030893) #13	Col18a1 (MGP_PahariEiJ_G0030892) #14	Slc19a1 (MGP_PahariEiJ_G0030891) #15	MGP_PahariEiJ_G0030890	Pcbp3 (MGP_PahariEiJ_G0030889)	Col6a1 (MGP_PahariEiJ_G0030888)	Col6a2 (MGP_PahariEiJ_G0030887) #17	Ftcd (MGP_PahariEiJ_G0030886) #18	Spatc1l (MGP_PahariEiJ_G0030885) #19	Lss (MGP_PahariEiJ_G0030884) #20	Mcm3ap (MGP_PahariEiJ_G0030883) #21	Ybey (MGP_PahariEiJ_G0030882) #22	2610028H24Rik (MGP_PahariEiJ_G0030881)	Pcnt (MGP_PahariEiJ_G0030880)	Dip2a (MGP_PahariEiJ_G0030879) #23	S100b (MGP_PahariEiJ_G0030878) #24	Prmt2 (MGP_PahariEiJ_G0030877) #25	Slc5a4a (MGP_PahariEiJ_G0030876)	Gm5134 (MGP_PahariEiJ_G0030875)	MGP_PahariEiJ_G0030874	Chchd10 (MGP_PahariEiJ_G0030873)	Mmp11 (MGP_PahariEiJ_G0030872)	Smarcb1 (MGP_PahariEiJ_G0030871)	Derl3 (MGP_PahariEiJ_G0030870)	Mif (MGP_PahariEiJ_G0030869)	Gstt2 (MGP_PahariEiJ_G0030868)	Gstt4 (MGP_PahariEiJ_G0030867)
Rat	MODERN SPECIES	12	Pttg1ip (ENSRNOG00000001223) #9	Itgb2 (ENSRNOG00000001224) #10	Slx9 (ENSRNOG00000001225) #11	Nme2-ps1 (ENSRNOG00000001226)	Adarb1 (ENSRNOG00000001227) #12	Pofut2 (ENSRNOG00000001228) #13	Col18a1 (ENSRNOG00000001229) #14	Slc19a1 (ENSRNOG00000001232) #15	Pcbp3 (ENSRNOG00000001245)	Col6a1 (ENSRNOG00000001249)	Col6a2 (ENSRNOG00000001254) #17	Ftcd (ENSRNOG00000001261) #18	Spatc1l (ENSRNOG00000070409) #19	Lss (ENSRNOG00000054549) #20	Mcm3ap (ENSRNOG00000001272) #21	Ybey (ENSRNOG00000021365) #22	RGD1564149 (ENSRNOG00000012714)	Pcnt (ENSRNOG00000001276)	Dip2a (ENSRNOG00000043212) #23	S100b (ENSRNOG00000001295) #24	Prmt2 (ENSRNOG00000001297) #25	Slc5a4 (ENSRNOG00000049734)	Slc5a4b (ENSRNOG00000001298)	Zfp280b (ENSRNOG00000028441)	RGD1563815 (ENSRNOG00000029979)	Vpreb3 (ENSRNOG00000065441)	RGD1564162 (ENSRNOG00000028386)	Chchd10 (ENSRNOG00000028356)	Mmp11 (ENSRNOG00000028344)	Smarcb1 (ENSRNOG00000028302)	Derl3 (ENSRNOG00000028243)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1105	Sumo3 (ENSNGAG00000009915) ##8	Pttg1ip (ENSNGAG00000014261) #9	Itgb2 (ENSNGAG00000015702) #10	Fam207a (ENSNGAG00000020787) #11	Adarb1 (ENSNGAG00000021602) #12	Pofut2 (ENSNGAG00000016043) #13	Col18a1 (ENSNGAG00000019514) #14	ENSNGAG00000003477 #15	Pcbp3 (ENSNGAG00000005416)	Col6a1 (ENSNGAG00000010525)	Col6a2 (ENSNGAG00000013702) #17	Ftcd (ENSNGAG00000015978) #18	Spatc1l (ENSNGAG00000016890) #19	Lss (ENSNGAG00000018100) #20	Mcm3ap (ENSNGAG00000020806) #21	Ybey (ENSNGAG00000000949) #22	ENSNGAG00000001257	Pcnt (ENSNGAG00000006451)	Dip2a (ENSNGAG00000014719) #23	S100b (ENSNGAG00000017093) #24	ENSNGAG00000017453 #25
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000041314	MIXL1 (ENSHGLG00000045669)	LIN9 (ENSHGLG00000007823)	Parp1 (ENSHGLG00000003992)	ENSHGLG00000035038	PLAG1 (ENSHGLG00000001672)	MOS (ENSHGLG00000049453)	ENSHGLG00000033196	LYN (ENSHGLG00000002926)	ENSHGLG00000000284	ENSHGLG00000000295	ENSHGLG00000000769	TBPL2 (ENSHGLG00000001017)	ENSHGLG00000001414	ENSHGLG00000049393	ENSHGLG00000016069 #22	ENSHGLG00000017345	PCNT (ENSHGLG00000015807)	DIP2A (ENSHGLG00000014043) #23	ENSHGLG00000013120 #24	ENSHGLG00000015854 #25	ENSHGLG00000032905	ENSHGLG00000047983	ENSHGLG00000051009	ENSHGLG00000042568	ENSHGLG00000012384	ENSHGLG00000050008	RPP38 (ENSHGLG00000012144)	ENSHGLG00000011997	ENSHGLG00000038242	ENSHGLG00000039803
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Guinea pig	MODERN SPECIES	110						POFUT2 (ENSCPOG00000009385) #13	COL18A1 (ENSCPOG00000020725) #14	SLC19A1 (ENSCPOG00000023229) #15	PCBP3 (ENSCPOG00000003648)	ENSCPOG00000030777	COL6A2 (ENSCPOG00000021819) #17	FTCD (ENSCPOG00000026874) #18	SPATC1L (ENSCPOG00000008358) #19	LSS (ENSCPOG00000013859) #20	MCM3AP (ENSCPOG00000002407) #21	YBEY (ENSCPOG00000002415) #22	ENSCPOG00000010788	PCNT (ENSCPOG00000015488)	DIP2A (ENSCPOG00000003803) #23	S100B (ENSCPOG00000037925) #24	PRMT2 (ENSCPOG00000019877) #25	ENSCPOG00000024671
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00950000182895.a.a.a.b.f #8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Long-tailed chinchilla	MODERN SPECIES	114	ENSCLAG00000006914 ##8	PTTG1IP (ENSCLAG00000008686) #9	ITGB2 (ENSCLAG00000011530) #10	SLX9 (ENSCLAG00000015540) #11	ADARB1 (ENSCLAG00000010595) #12	POFUT2 (ENSCLAG00000014869) #13	COL18A1 (ENSCLAG00000009590) #14	SLC19A1 (ENSCLAG00000005746) #15	PCBP3 (ENSCLAG00000006667)	COL6A1 (ENSCLAG00000004686)	COL6A2 (ENSCLAG00000009215) #17	FTCD (ENSCLAG00000014029) #18	SPATC1L (ENSCLAG00000016436) #19	LSS (ENSCLAG00000011987) #20	MCM3AP (ENSCLAG00000013358) #21	YBEY (ENSCLAG00000006892) #22	ENSCLAG00000007820	PCNT (ENSCLAG00000012697)	DIP2A (ENSCLAG00000013614) #23	S100B (ENSCLAG00000009038) #24	PRMT2 (ENSCLAG00000006778) #25
Degu	MODERN SPECIES	86	ENSODEG00000013838 #8	PTTG1IP (ENSODEG00000013537) #9	ITGB2 (ENSODEG00000013569) #10	ADARB1 (ENSODEG00000014508) #12	POFUT2 (ENSODEG00000013451) #13	ENSODEG00000020203	ENSODEG00000013398	PCBP3 (ENSODEG00000012873)	ENSODEG00000013981	ENSODEG00000020105	COL6A2 (ENSODEG00000013531) #17	FTCD (ENSODEG00000013308) #18	SPATC1L (ENSODEG00000013418) #19	LSS (ENSODEG00000014728) #20	MCM3AP (ENSODEG00000013662) #21	YBEY (ENSODEG00000014950) #22	DIP2A (ENSODEG00000013484) #23	PRMT2 (ENSODEG00000013920) #25	IGFBPL1 (ENSODEG00000013895)	ALDH1B1 (ENSODEG00000014240)	SHB (ENSODEG00000013286)	ENSODEG00000020274	DCAF10 (ENSODEG00000015520)	ENSODEG00000014904	FRMPD1 (ENSODEG00000016482)	FBXO10 (ENSODEG00000013432)	POLR1E (ENSODEG00000014565)	ZBTB5 (ENSODEG00000013905)	ENSODEG00000014628	PAX5 (ENSODEG00000014314)	MELK (ENSODEG00000015169)
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00950000182895.a.b.j ##8	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989.h #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Marmotini	ANCESTRAL SPECIES	13	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989.h #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25
Marmotini_b	ANCESTRAL SPECIES	182	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989.h #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25
Squirrel	MODERN SPECIES	378	ENSSTOG00000010587 ##8	PTTG1IP (ENSSTOG00000021779) #9	ITGB2 (ENSSTOG00000001412) #10	SLX9 (ENSSTOG00000028031) #11	ADARB1 (ENSSTOG00000015792) #12	POFUT2 (ENSSTOG00000028617) #13	ENSSTOG00000027467 #14	SLC19A1 (ENSSTOG00000007113) #15	PCBP3 (ENSSTOG00000007178)	ENSSTOG00000022346	COL6A2 (ENSSTOG00000024366) #17	FTCD (ENSSTOG00000020132) #18	SPATC1L (ENSSTOG00000026388) #19	LSS (ENSSTOG00000007503) #20	MCM3AP (ENSSTOG00000007531) #21	YBEY (ENSSTOG00000029373) #22	ENSSTOG00000031143	PCNT (ENSSTOG00000007621)	DIP2A (ENSSTOG00000007172) #23	PRMT2 (ENSSTOG00000016495) #25
Arctic ground squirrel	MODERN SPECIES	704											COL6A2 (ENSUPAG00010007568) #17	FTCD (ENSUPAG00010007605) #18	SPATC1L (ENSUPAG00010007627) #19	LSS (ENSUPAG00010007641) #20	MCM3AP (ENSUPAG00010007682) #21	YBEY (ENSUPAG00010007732) #22	PCNT (ENSUPAG00010007767)	DIP2A (ENSUPAG00010007831) #23	PRMT2 (ENSUPAG00010008124) #25	ENSUPAG00010008141
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005022452 ##8	ENSSVLG00005022355 #9	ITGB2 (ENSSVLG00005022020) #10	SLX9 (ENSSVLG00005021933) #11	ADARB1 (ENSSVLG00005021761) #12	POFUT2 (ENSSVLG00005021705) #13	SLC19A1 (ENSSVLG00005020132) #15	PCBP3 (ENSSVLG00005019852)	COL6A1 (ENSSVLG00005019712)	COL6A2 (ENSSVLG00005019580) #17	ENSSVLG00005019331 #18	ENSSVLG00005019107 #18	SPATC1L (ENSSVLG00005019009) #19	LSS (ENSSVLG00005018385) #20	MCM3AP (ENSSVLG00005018327) #21	YBEY (ENSSVLG00005018192) #22	ENSSVLG00005018102	ENSSVLG00005018080	DIP2A (ENSSVLG00005015407) #23	S100B (ENSSVLG00005014991) #24	PRMT2 (ENSSVLG00005014458) #25
Atlantogenata	ANCESTRAL SPECIES	141				ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25	ENSGT00940000154486.b.a.a.b
Xenarthra	ANCESTRAL SPECIES	366										ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24	ENSGT00940000160683 #25
Armadillo	MODERN SPECIES	4624										ENSDNOG00000043275	COL6A2 (ENSDNOG00000038020) #17	FTCD (ENSDNOG00000046455) #18	SPATC1L (ENSDNOG00000039388) #19	LSS (ENSDNOG00000000135) #20	MCM3AP (ENSDNOG00000006842) #21	YBEY (ENSDNOG00000037393) #22	ENSDNOG00000044870	PCNT (ENSDNOG00000024519)	ENSDNOG00000040085	ENSDNOG00000046721 #23	S100B (ENSDNOG00000045806) #24	ENSDNOG00000017401 #25
Sloth	MODERN SPECIES	6568																ENSCHOG00000006788 #22
Afrotheria	ANCESTRAL SPECIES	177				ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23
Tenrec	MODERN SPECIES	8796																YBEY (ENSETEG00000018449) #22	ENSETEG00000018451
Afrotheria_a	ANCESTRAL SPECIES	179				ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162185	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23
Hyrax	MODERN SPECIES	4382														LSS (ENSPCAG00000007230) #20	MCM3AP (ENSPCAG00000007351) #21	YBEY (ENSPCAG00000007595) #22
Elephant	MODERN SPECIES	62				SLX9 (ENSLAFG00000010542) #11	ADARB1 (ENSLAFG00000007480) #12	POFUT2 (ENSLAFG00000011888) #13	COL18A1 (ENSLAFG00000017396) #14	SLC19A1 (ENSLAFG00000018599) #15	PCBP3 (ENSLAFG00000020835)	ENSLAFG00000010458	COL6A2 (ENSLAFG00000001954) #17	FTCD (ENSLAFG00000030714) #18	LSS (ENSLAFG00000003317) #20	ENSLAFG00000025926 #21	ENSLAFG00000003323 #21	YBEY (ENSLAFG00000031106) #22	ENSLAFG00000025881	PCNT (ENSLAFG00000017965)	DIP2A (ENSLAFG00000017975) #23
Marsupialia	ANCESTRAL SPECIES	31	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25	ENSGT00940000161997.a #24	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00940000163820	ENSGT00940000163976	ENSGT00940000157267	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162185	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25	ENSGT00940000161997.a #24	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00940000163820	ENSGT00940000163976	ENSGT00940000157267	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b
Diprotodontia	ANCESTRAL SPECIES	73	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25	ENSGT00940000161997.a #24	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b
Diprotodontia_a	ANCESTRAL SPECIES	70	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00390000007989 #13	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25	ENSGT00940000161997.a #24	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b
koala	MODERN SPECIES	242	UBE2G2 (ENSPCIG00000032087) #7	PTTG1IP (ENSPCIG00000024195) #9	ITGB2 (ENSPCIG00000024190) #10	ENSPCIG00000024188 #11	ADARB1 (ENSPCIG00000024187) #12	POFUT2 (ENSPCIG00000024184) #13	COL18A1 (ENSPCIG00000037322) #14	SLC19A1 (ENSPCIG00000007128) #15	ENSPCIG00000028092 #16	COL6A1 (ENSPCIG00000019516)	COL6A2 (ENSPCIG00000015214) #17	FTCD (ENSPCIG00000015206) #18	SPATC1L (ENSPCIG00000015203) #19	LSS (ENSPCIG00000015192) #20	MCM3AP (ENSPCIG00000015184) #21	YBEY (ENSPCIG00000015181) #22	ENSPCIG00000008757	DIP2A (ENSPCIG00000008739) #23	PRMT2 (ENSPCIG00000008734) #25	ENSPCIG00000008733 #24	ENSPCIG00000008732	TRPM8 (ENSPCIG00000009198)	ENSPCIG00000008418	ENSPCIG00000032509	NDUFA10 (ENSPCIG00000020762)	HDAC4 (ENSPCIG00000026377)	TWIST2 (ENSPCIG00000026380)
Common wonbat	MODERN SPECIES	754	PTTG1IP (ENSVURG00010024041) #9	ITGB2 (ENSVURG00010024043) #10	ENSVURG00010024045 #11	ADARB1 (ENSVURG00010024046) #12	ENSVURG00010024049 #13	ENSVURG00010024050 #13	ENSVURG00010024054 #14	SLC19A1 (ENSVURG00010024057) #15	ENSVURG00010024058 #16	ENSVURG00010024060	COL6A2 (ENSVURG00010024064) #17	FTCD (ENSVURG00010024070) #18	SPATC1L (ENSVURG00010024072) #19	LSS (ENSVURG00010024074) #20	MCM3AP (ENSVURG00010024078) #21	YBEY (ENSVURG00010024080) #22	ENSVURG00010024082	ENSVURG00010024091	DIP2A (ENSVURG00010024120) #23	PRMT2 (ENSVURG00010024125) #25	S100B (ENSVURG00010024133) #24	ENSVURG00010024134	TRPM8 (ENSVURG00010024178)	ENSVURG00010024372
Wallaby	MODERN SPECIES	6489															MCM3AP (ENSMEUG00000004992) #21	ENSMEUG00000005044 #22
Opossum	MODERN SPECIES	1	ST6GAL1 (ENSMODG00000013313)	DNAJB11 (ENSMODG00000013307)	TBCCD1 (ENSMODG00000013298)	CRYGS (ENSMODG00000013295)	ENSMODG00000013291	DGKG (ENSMODG00000023132)	ETV5 (ENSMODG00000013273)	ENSMODG00000039909	ENSMODG00000036464	ENSMODG00000048684	TRA2B (ENSMODG00000013248)	ENSMODG00000037655 #18	SPATC1L (ENSMODG00000008502) #19	LSS (ENSMODG00000008489) #20	MCM3AP (ENSMODG00000008187) #21	YBEY (ENSMODG00000008458) #22	ENSMODG00000046878 #21	ENSMODG00000008392	DIP2A (ENSMODG00000008324) #23	ENSMODG00000008071	ENSMODG00000008038	ENSMODG00000041690	UGT1A6 (ENSMODG00000007963)	ENSMODG00000046309	ENSMODG00000007745	NDUFA10 (ENSMODG00000007705)	ENSMODG00000008969	RAB17 (ENSMODG00000043415)	LRRFIP1 (ENSMODG00000008928)	ENSMODG00000008910	ENSMODG00000041903
Platypus	MODERN SPECIES	18	PTTG1IP (ENSOANG00000050465) #9	ITGB2 (ENSOANG00000000415) #10	ENSOANG00000046464 #11	ADARB1 (ENSOANG00000012491) #12	POFUT2 (ENSOANG00000012784) #13	ENSOANG00000043147 #14	ENSOANG00000000668 #15	ENSOANG00000006265 #16	ENSOANG00000006264	COL6A2 (ENSOANG00000013567) #17	ENSOANG00000046435 #17	FTCD (ENSOANG00000013566) #18	ENSOANG00000000806 #19	LSS (ENSOANG00000013565) #20	MCM3AP (ENSOANG00000013563) #21	YBEY (ENSOANG00000038356) #22	ENSOANG00000028261 #21	ENSOANG00000013561	ENSOANG00000020123	DIP2A (ENSOANG00000013554) #23	ENSOANG00000041326	PRMT2 (ENSOANG00000013551) #25	S100B (ENSOANG00000013550) #24	ENSOANG00000013548	NDUFA10 (ENSOANG00000002908)	HDAC4 (ENSOANG00000012951)	TWIST2 (ENSOANG00000012950)	ASB1 (ENSOANG00000044852)	ENSOANG00000049765	TRAF3IP1 (ENSOANG00000012754)	USP40 (ENSOANG00000012752)
Sauria	ANCESTRAL SPECIES	71			ENSGT00940000167200	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00950000183546	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000162889	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000161997.a #24
Lepidosauria	ANCESTRAL SPECIES	111								ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000012063	ENSGT00390000003338	ENSGT00390000010170.a.b.x	ENSGT01050000244937.a.a	ENSGT00390000011864
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000003338	ENSGT00390000012063	ENSGT00390000010170.a.b.x	ENSGT01050000244937.a.a
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00940000162768.B #16	ENSGT00950000183546	ENSGT00940000181461	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000003338	ENSGT00390000012063	ENSGT00390000010170.a.b.x	ENSGT01050000244937.a.a
Common wall lizard	MODERN SPECIES		ASB18 (ENSPMRG00000001902)	IQCA1 (ENSPMRG00000001911)	ENSPMRG00000001932	COPS8 (ENSPMRG00000001949)	MLPH (ENSPMRG00000001979)	ENSPMRG00000002010	RAB17 (ENSPMRG00000002014)	ENSPMRG00000002029 #16	ENSPMRG00000002049	ENSPMRG00000002055	COL6A2 (ENSPMRG00000002061) #17	FTCD (ENSPMRG00000002078) #18	SPATC1L (ENSPMRG00000002088) #19	LSS (ENSPMRG00000002104) #20	MCM3AP (ENSPMRG00000002152) #21	YBEY (ENSPMRG00000002313) #22	POFUT2 (ENSPMRG00000002339) #13	ADARB1 (ENSPMRG00000002397) #12	SLX9 (ENSPMRG00000002410) #11	ITGB2 (ENSPMRG00000002418) #10	KMO (ENSPMRG00000002431)	ENSPMRG00000002448	ENSPMRG00000002461	RCBTB2 (ENSPMRG00000002466)	RB1 (ENSPMRG00000002469)	LPAR6 (ENSPMRG00000002480)	ENSPMRG00000002484	ITM2B (ENSPMRG00000002490)	NUDT15 (ENSPMRG00000002501)	MED4 (ENSPMRG00000002508)	SUCLA2 (ENSPMRG00000002516)
Argentine black and white tegu	MODERN SPECIES	12	IQCA1 (ENSSMRG00000020961)	ACKR3 (ENSSMRG00000020962)	COPS8 (ENSSMRG00000020967)	COL6A3 (ENSSMRG00000020968)	MLPH (ENSSMRG00000020969)	PRLH (ENSSMRG00000020970)	RAB17 (ENSSMRG00000020971)	ENSSMRG00000020972 #16	ENSSMRG00000020973	ENSSMRG00000020974	COL6A2 (ENSSMRG00000020975) #17	FTCD (ENSSMRG00000020977) #18	SPATC1L (ENSSMRG00000020978) #19	LSS (ENSSMRG00000020979) #20	MCM3AP (ENSSMRG00000020980) #21	YBEY (ENSSMRG00000020981) #22	POFUT2 (ENSSMRG00000020982) #13	ADARB1 (ENSSMRG00000020983) #12	SLX9 (ENSSMRG00000020984) #11	ITGB2 (ENSSMRG00000020985) #10	KMO (ENSSMRG00000021047)	ENSSMRG00000021055	ENSSMRG00000021064	RCBTB2 (ENSSMRG00000021065)	RB1 (ENSSMRG00000021067)	LPAR6 (ENSSMRG00000021069)	ITM2B (ENSSMRG00000021070)	NUDT15 (ENSSMRG00000021071)	MED4 (ENSSMRG00000021073)	SUCLA2 (ENSSMRG00000021075)	HTR2A (ENSSMRG00000021077)
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000003338	ENSGT00390000012063	ENSGT00390000010170.a.b.x
Elapidae	ANCESTRAL SPECIES		ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00950000185272	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000161407	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT01050000244937.a.a	ENSGT00390000010170.a.b.x	ENSGT00390000012063	ENSGT00390000003338	ENSGT00950000183115.b.a	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00940000158925	ENSGT00940000155311.B	ENSGT00730000110871.a.a.a.b
Elapidae_a	ANCESTRAL SPECIES	39	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00950000185272	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000161407	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT01050000244937.a.a	ENSGT00390000010170.a.b.x	ENSGT00390000012063	ENSGT00390000003338	ENSGT00950000183115.b.a	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00940000158925	ENSGT00940000155311.B	ENSGT00730000110871.a.a.a.b
Acanthophiinae	ANCESTRAL SPECIES	39	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00950000185272	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000161407	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT01050000244937.a.a	ENSGT00390000010170.a.b.x	ENSGT00390000012063	ENSGT00390000003338	ENSGT00950000183115.b.a	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00940000158925	ENSGT00960000192136	ENSGT00730000110871.a.a.a.b
Mainland tiger snake	MODERN SPECIES	110	ENSNSUG00000012811	ACKR3 (ENSNSUG00000012812)	COPS8 (ENSNSUG00000012813)	ENSNSUG00000012830	ENSNSUG00000012831	MLPH (ENSNSUG00000012832)	PRLH (ENSNSUG00000012876)	ENSNSUG00000012877 #16	ENSNSUG00000012878	ENSNSUG00000012881	COL6A2 (ENSNSUG00000012883) #17	FTCD (ENSNSUG00000012884) #18	ENSNSUG00000012885	LSS (ENSNSUG00000012886) #20	MCM3AP (ENSNSUG00000013011) #21	YBEY (ENSNSUG00000013065) #22	POFUT2 (ENSNSUG00000000048) #13	IRS2 (ENSNSUG00000000056)	TNFSF13B (ENSNSUG00000000328)	ABHD13 (ENSNSUG00000000406)	LIG4 (ENSNSUG00000000410)	HTR2A (ENSNSUG00000000412)	SUCLA2 (ENSNSUG00000000414)	MED4 (ENSNSUG00000000419)	NUDT15 (ENSNSUG00000000422)	ITM2B (ENSNSUG00000000425)	ENSNSUG00000000427	RB1 (ENSNSUG00000000430)	LPAR6 (ENSNSUG00000000434)	RCBTB2 (ENSNSUG00000000438)	ENSNSUG00000000441
Eastern brown snake	MODERN SPECIES	36	IQCA1 (ENSPTXG00000000336)	ACKR3 (ENSPTXG00000000332)	COPS8 (ENSPTXG00000000311)	COL6A3 (ENSPTXG00000000271)	ENSPTXG00000000246	ENSPTXG00000000237	ENSPTXG00000000211	ENSPTXG00000000194 #16	ENSPTXG00000000142	ENSPTXG00000003775	COL6A2 (ENSPTXG00000003773) #17	FTCD (ENSPTXG00000003772) #18	SPATC1L (ENSPTXG00000003771) #19	LSS (ENSPTXG00000002713) #20	MCM3AP (ENSPTXG00000002655) #21	YBEY (ENSPTXG00000002648) #22	ENSPTXG00000002646 #13	ENSPTXG00000002645 #13	IRS2 (ENSPTXG00000002597)	TNFSF13B (ENSPTXG00000002577)	ABHD13 (ENSPTXG00000002576)	LIG4 (ENSPTXG00000002573)	HTR2A (ENSPTXG00000002570)	SUCLA2 (ENSPTXG00000002568)	MED4 (ENSPTXG00000002567)	NUDT15 (ENSPTXG00000002564)	ITM2B (ENSPTXG00000002561)	LPAR6 (ENSPTXG00000002559)	RB1 (ENSPTXG00000002482)	RCBTB2 (ENSPTXG00000002468)	ENSPTXG00000002466
Blue-lipped sea krait	MODERN SPECIES	7249																YBEY (ENSLLTG00000007573) #22	POFUT2 (ENSLLTG00000007542) #13	IRS2 (ENSLLTG00000007489)	TNFSF13B (ENSLLTG00000007402)	ABHD13 (ENSLLTG00000007378)	LIG4 (ENSLLTG00000007363)	HTR2A (ENSLLTG00000007302)	SUCLA2 (ENSLLTG00000004558)
Indian cobra	MODERN SPECIES		ENSNNAG00000013714	GBX2 (ENSNNAG00000013633)	IQCA1 (ENSNNAG00000013491)	ACKR3 (ENSNNAG00000013475)	COPS8 (ENSNNAG00000013456)	COL6A3 (ENSNNAG00000013218)	MLPH (ENSNNAG00000013124)	ENSNNAG00000013103	ENSNNAG00000013062 #16	ENSNNAG00000012914	COL6A2 (ENSNNAG00000012890) #17	FTCD (ENSNNAG00000012835) #18	SPATC1L (ENSNNAG00000012819) #19	LSS (ENSNNAG00000010089) #20	MCM3AP (ENSNNAG00000009601) #21	YBEY (ENSNNAG00000009555) #22	POFUT2 (ENSNNAG00000009522) #13	IRS2 (ENSNNAG00000009481)	TNFSF13B (ENSNNAG00000009437)	ABHD13 (ENSNNAG00000009427)	LIG4 (ENSNNAG00000009416)	HTR2A (ENSNNAG00000009399)	SUCLA2 (ENSNNAG00000009363)	MED4 (ENSNNAG00000009342)	NUDT15 (ENSNNAG00000009329)	ITM2B (ENSNNAG00000009301)	LPAR6 (ENSNNAG00000009281)	RB1 (ENSNNAG00000009195)	RCBTB2 (ENSNNAG00000009162)	ENSNNAG00000009129	ENSNNAG00000008922
Lizard	MODERN SPECIES		LGALSL (ENSACAG00000001605)	COL6A3 (ENSACAG00000004231)	ENSACAG00000040968	MLPH (ENSACAG00000004551)	PRLH (ENSACAG00000020999)	RAB17 (ENSACAG00000004554)	ENSACAG00000004607 #16	ENSACAG00000043473	ENSACAG00000036057	ENSACAG00000004735	COL6A2 (ENSACAG00000004843) #17	FTCD (ENSACAG00000004847) #18	SPATC1L (ENSACAG00000042410) #19	LSS (ENSACAG00000004914) #20	MCM3AP (ENSACAG00000004980) #21	YBEY (ENSACAG00000005066) #22	TRAM2 (ENSACAG00000005070)	EFHC1 (ENSACAG00000005118)	MCM3 (ENSACAG00000005146)	IL17F (ENSACAG00000005245)	TFAP2B (ENSACAG00000005251)	TFAP2D (ENSACAG00000005336)	ENSACAG00000005354	CRISP3 (ENSACAG00000005469)	FAM161A (ENSACAG00000005568)	CCT4 (ENSACAG00000005569)	ENSACAG00000034625	COMMD1 (ENSACAG00000005706)	B3GNT2 (ENSACAG00000005727)	ENSACAG00000040766	ENSACAG00000037410
tuatara	MODERN SPECIES	1378									ENSSPUG00000018689	COL6A2 (ENSSPUG00000018781) #17	FTCD (ENSSPUG00000018799) #18	SPATC1L (ENSSPUG00000018810) #19	LSS (ENSSPUG00000018817) #20	ENSSPUG00000018824	MCM3AP (ENSSPUG00000018832) #21	YBEY (ENSSPUG00000018844) #22	POFUT2 (ENSSPUG00000018852) #13
Archelosauria	ANCESTRAL SPECIES	57															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01030000235951	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005581.a #18	ENSGT00940000155682 #17	ENSGT00940000162889	ENSGT01030000235116
Cryptodira	ANCESTRAL SPECIES	82															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263521.b	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005581.a #18	ENSGT00940000155682 #17	ENSGT00940000162889	ENSGT01030000235116
Chinese turtle	MODERN SPECIES	312		CALB2 (ENSPSIG00000010519)	NAB1 (ENSPSIG00000011038)	NEMP2 (ENSPSIG00000011542)	MFSD6 (ENSPSIG00000012231)	HIBCH (ENSPSIG00000012329)	MSTN (ENSPSIG00000013093)	PMS1 (ENSPSIG00000013731)	ORMDL1 (ENSPSIG00000014497)	OSGEPL1 (ENSPSIG00000014541)	ANKAR (ENSPSIG00000014767)	ASNSD1 (ENSPSIG00000015372)	SLC40A1 (ENSPSIG00000015492)	WDR75 (ENSPSIG00000015923)	MCM3AP (ENSPSIG00000017417) #21	YBEY (ENSPSIG00000005816) #22	POFUT2 (ENSPSIG00000005856) #13	ADARB1 (ENSPSIG00000006201) #12	SLX9 (ENSPSIG00000007857) #11	ITGB2 (ENSPSIG00000007865) #10	KMO (ENSPSIG00000009281)	ENSPSIG00000009478	ENSPSIG00000009495	DIP2A (ENSPSIG00000009615) #23	ENSPSIG00000000672	S100B (ENSPSIG00000010916) #24	LSS (ENSPSIG00000010939) #20
Testudinoidea	ANCESTRAL SPECIES	57													ENSGT00390000014309	ENSGT00390000004367	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a.m	ENSGT01100000263521.b	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005581.a #18	ENSGT00940000155682 #17	ENSGT01030000235116
Emydidae	ANCESTRAL SPECIES	107														ENSGT00390000004367	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263521.b	ENSGT01100000263556.a.a.m	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005581.a #18
painted turtle	MODERN SPECIES	990														ENSCPBG00000004594	MCM3AP (ENSCPBG00000004543) #21	YBEY (ENSCPBG00000004508) #22	POFUT2 (ENSCPBG00000004224) #13	ADARB1 (ENSCPBG00000004191) #12	SLX9 (ENSCPBG00000004173) #11
Three-toed box turtle	MODERN SPECIES	176														ENSTMTG00000013431	MCM3AP (ENSTMTG00000013346) #21	YBEY (ENSTMTG00000013320) #22	POFUT2 (ENSTMTG00000013038) #13	ADARB1 (ENSTMTG00000012997) #12	SLX9 (ENSTMTG00000012983) #11	ITGB2 (ENSTMTG00000010872) #10	KMO (ENSTMTG00000010700)	ENSTMTG00000010677	PCNT (ENSTMTG00000010421)	DIP2A (ENSTMTG00000010338) #23	ENSTMTG00000010326	S100B (ENSTMTG00000010309) #24	LSS (ENSTMTG00000009259) #20	FTCD (ENSTMTG00000009148) #18
Testudinidae	ANCESTRAL SPECIES	76													ENSGT00390000014309	ENSGT00390000004367	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a.m	ENSGT00940000154411.`b.h.a	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005581.a #18	ENSGT00940000155682 #17	ENSGT01030000235116	ENSGT00940000163601
Abingdon island giant tortoise	MODERN SPECIES	2277														MRPS16 (ENSCABG00000017186)	MCM3AP (ENSCABG00000017177) #21	YBEY (ENSCABG00000017174) #22	POFUT2 (ENSCABG00000017028) #13	ADARB1 (ENSCABG00000017006) #12	ENSCABG00000016999	ENSCABG00000016998
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005012861	ENSGEVG00005012842	ENSGEVG00005012632	ENSGEVG00005012175	ENSGEVG00005012120	ENSGEVG00005011995	ENSGEVG00005011891	ENSGEVG00005011848	ENSGEVG00005011826	ENSGEVG00005011780	ENSGEVG00005011747	ENSGEVG00005011620	ENSGEVG00005011505	ENSGEVG00005011461	MCM3AP (ENSGEVG00005011367) #21	YBEY (ENSGEVG00005011338) #22	POFUT2 (ENSGEVG00005011081) #13	ADARB1 (ENSGEVG00005011015) #12	ENSGEVG00005010964	SLX9 (ENSGEVG00005010943) #11	ITGB2 (ENSGEVG00005010898) #10	KMO (ENSGEVG00005010609)	PCNT (ENSGEVG00005009792)	DIP2A (ENSGEVG00005009109) #23	ENSGEVG00005008968	ENSGEVG00005008935	ENSGEVG00005008908	S100B (ENSGEVG00005008882) #24	ENSGEVG00005008427 #20	FTCD (ENSGEVG00005008182) #18	ENSGEVG00005007922 #20
Archosauria	ANCESTRAL SPECIES	61															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01030000235951	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005581.a #18	ENSGT00940000155682 #17	ENSGT00940000162889	ENSGT01030000235116
Aves	ANCESTRAL SPECIES	63							ENSGT00940000167200	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01030000235951	ENSGT00390000011570 #20
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a	ENSGT00940000161997.a #24	ENSGT00390000011570 #20
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a	ENSGT00940000161997.a #24	ENSGT00390000011570 #20
Anatidae	ANCESTRAL SPECIES	10	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a	ENSGT00940000161997.a #24	ENSGT00390000011570 #20	ENSGT00390000005159	ENSGT00940000156444	ENSGT00940000155861.C	ENSGT00940000159606
Pink-footed goose	MODERN SPECIES	545													ENSABRG00000015463	VMO1 (ENSABRG00000015465)	MCM3AP (ENSABRG00000015486) #21	ENSABRG00000015933 #22	POFUT2 (ENSABRG00000015936) #13
Phasianidae	ANCESTRAL SPECIES																	ENSGT00950000183170.b.b #22
Japanese quail	MODERN SPECIES	25	USP40 (ENSCJPG00005012796)	ENSCJPG00005012795	ASB1 (ENSCJPG00005012794)	ENSCJPG00005012792	TWIST2 (ENSCJPG00005012791)	HDAC4 (ENSCJPG00005012790)	NDUFA10 (ENSCJPG00005012787)	ENSCJPG00005012786	ENSCJPG00005012785	COL18A1 (ENSCJPG00005012784) #14	SLC19A1 (ENSCJPG00005012783) #15	ENSCJPG00005012781 #16	ENSCJPG00005012780	COL6A2 (ENSCJPG00005012779) #17	FTCD (ENSCJPG00005012778) #18	YBEY (ENSCJPG00005012777) #22	MCM3AP (ENSCJPG00005012505) #21	POFUT2 (ENSCJPG00005012498) #13	ENSCJPG00005012497	LSS (ENSCJPG00005012495) #20	S100B (ENSCJPG00005012494) #24	DIP2A (ENSCJPG00005011865) #23	PCNT (ENSCJPG00005011847)	C21orf58 (ENSCJPG00005011846)	KMO (ENSCJPG00005011818)	ITGB2 (ENSCJPG00005010917) #10	ENSCJPG00005010916 #11	ADARB1 (ENSCJPG00005010914) #12	GLS (ENSCJPG00005009421)	STAT1 (ENSCJPG00005009401)	STAT4 (ENSCJPG00005008601)
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a	ENSGT00940000161997.a #24	ENSGT00390000011570 #20
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000155992 #12	ENSGT00390000015709 #11	ENSGT01090000259987.a.a.a #10	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT01100000263556.a.a	ENSGT00940000161997.a #24	ENSGT00390000011570 #20
Kakapo	MODERN SPECIES	22	ENSSHBG00005021194	COL6A2 (ENSSHBG00005021193) #17	ENSSHBG00005021192	ERBB4 (ENSSHBG00005021191)	CPS1 (ENSSHBG00005021188)	LANCL1 (ENSSHBG00005021187)	MYL1 (ENSSHBG00005021186)	ACADL (ENSSHBG00005021185)	KANSL1L (ENSSHBG00005021184)	ENSSHBG00005021183	UNC80 (ENSSHBG00005021181)	MAP2 (ENSSHBG00005021179)	FTCD (ENSSHBG00005021178) #18	ENSSHBG00005021177	MCM3AP (ENSSHBG00005021176) #21	YBEY (ENSSHBG00005021175) #22	POFUT2 (ENSSHBG00005021174) #13	ENSSHBG00005021173 #12	ENSSHBG00005021172 #12	SLX9 (ENSSHBG00005021171) #11	ITGB2 (ENSSHBG00005021170) #10	KMO (ENSSHBG00005021169)	DIP2A (ENSSHBG00005020890) #23	ENSSHBG00005020403	ENSSHBG00005020388	S100B (ENSSHBG00005020371) #24	LSS (ENSSHBG00005020363) #20	ENSSHBG00005020357	CWF19L1 (ENSSHBG00005020349)	CHUK (ENSSHBG00005020303)	ERLIN1 (ENSSHBG00005020279)
Golden eagle	MODERN SPECIES	22	ASB1 (ENSACCG00020012311)	TWIST2 (ENSACCG00020012284)	HDAC4 (ENSACCG00020012255)	NDUFA10 (ENSACCG00020012200)	ENSACCG00020012153	ENSACCG00020012065	COL18A1 (ENSACCG00020011973) #14	SLC19A1 (ENSACCG00020011933) #15	ENSACCG00020011897 #16	ENSACCG00020011863	COL6A2 (ENSACCG00020011711) #17	FTCD (ENSACCG00020011658) #18	ENSACCG00020011632	ENSACCG00020011567	MCM3AP (ENSACCG00020011305) #21	YBEY (ENSACCG00020011066) #22	POFUT2 (ENSACCG00020011041) #13	ADARB1 (ENSACCG00020010987) #12	SLX9 (ENSACCG00020010969) #11	ITGB2 (ENSACCG00020010936) #10	KMO (ENSACCG00020010917)	C21orf58 (ENSACCG00020010903)	PCNT (ENSACCG00020010826)	DIP2A (ENSACCG00020010702) #23	ENSACCG00020010675	S100B (ENSACCG00020010663) #24	LSS (ENSACCG00020010640) #20	ENSACCG00020010625	ENSACCG00020010612	LACTBL1 (ENSACCG00020010600)	EPHB2 (ENSACCG00020010571)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000160270.s.b	ENSGT00940000154793.C.ab	ENSGT00960000192637	ENSGT00940000154365.a.b	ENSGT00940000162056	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b.b	ENSGT00940000154486.b.a.a.b.a	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000160270.s.b	ENSGT00940000154793.C.ab	ENSGT00960000192637	ENSGT00940000154365.a.b	ENSGT00940000162056	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b.b	ENSGT00940000154486.b.a.a.b.a	ENSGT00940000154486.b.b	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #13	ENSGT00940000160270.s.a	ENSGT00940000154793.C.ab	ENSGT00960000192637	ENSGT00940000154365.a.b	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452
Zebra finch	MODERN SPECIES	29	ENSTGUG00000021876	TWIST2 (ENSTGUG00000025055)	HDAC4 (ENSTGUG00000003197)	ENSTGUG00000024424	NDUFA10 (ENSTGUG00000003244)	ENSTGUG00000027043	ENSTGUG00000003263	COL18A1 (ENSTGUG00000003295) #14	SLC19A1 (ENSTGUG00000016708) #15	ENSTGUG00000003316 #16	ENSTGUG00000003341	COL6A2 (ENSTGUG00000003386) #17	FTCD (ENSTGUG00000003422) #18	ENSTGUG00000003453	MCM3AP (ENSTGUG00000003458) #21	YBEY (ENSTGUG00000003495) #22	POFUT2 (ENSTGUG00000003497) #13	ENSTGUG00000019313	TRPM8 (ENSTGUG00000003521)	AGAP1 (ENSTGUG00000003583)	ENSTGUG00000029585	GBX2 (ENSTGUG00000003625)	ACKR3 (ENSTGUG00000003645)	COPS8 (ENSTGUG00000003647)	ENSTGUG00000024557	COL6A3 (ENSTGUG00000003667)	MLPH (ENSTGUG00000003766)	PRLH (ENSTGUG00000020810)	RAB17 (ENSTGUG00000003786)	ENSTGUG00000003797	ENSTGUG00000021528
Common canary	MODERN SPECIES	8	USP40 (ENSSCAG00000009414)	TRAF3IP1 (ENSSCAG00000009407)	ASB1 (ENSSCAG00000009401)	TWIST2 (ENSSCAG00000009396)	HDAC4 (ENSSCAG00000009386)	NDUFA10 (ENSSCAG00000009359)	ENSSCAG00000009324	ENSSCAG00000009313	ENSSCAG00000009304 #14	SLC19A1 (ENSSCAG00000009294) #15	ENSSCAG00000009284 #16	ENSSCAG00000009257	ENSSCAG00000009229 #17	ENSSCAG00000009223 #18	ENSSCAG00000009219	YBEY (ENSSCAG00000009216) #22	MCM3AP (ENSSCAG00000009107) #21	POFUT2 (ENSSCAG00000009071) #13	TRPM8 (ENSSCAG00000009044)	AGAP1 (ENSSCAG00000009030)	GBX2 (ENSSCAG00000009011)	IQCA1 (ENSSCAG00000008997)	ACKR3 (ENSSCAG00000008987)	COPS8 (ENSSCAG00000008963)	COL6A3 (ENSSCAG00000008871)	MLPH (ENSSCAG00000008835)	PRLH (ENSSCAG00000008829)	RAB17 (ENSSCAG00000008822)	ENSSCAG00000008808	ENSSCAG00000008802	RAMP1 (ENSSCAG00000008799)
Flycatcher	MODERN SPECIES	26	TWIST2 (ENSFALG00000014990)	HDAC4 (ENSFALG00000003839)	ENSFALG00000025269	NDUFA10 (ENSFALG00000003854)	ENSFALG00000003870	ENSFALG00000028595	ENSFALG00000024703	COL18A1 (ENSFALG00000003898) #14	SLC19A1 (ENSFALG00000003945) #15	ENSFALG00000003949 #16	ENSFALG00000024674	COL6A2 (ENSFALG00000003991) #17	FTCD (ENSFALG00000004013) #18	ENSFALG00000015028	MCM3AP (ENSFALG00000004024) #21	YBEY (ENSFALG00000004049) #22	ENSFALG00000027325 #13
Great tit	MODERN SPECIES	27	ASB1 (ENSPMJG00000006219)	ENSPMJG00000006222	TWIST2 (ENSPMJG00000006223)	HDAC4 (ENSPMJG00000006236)	NDUFA10 (ENSPMJG00000006274)	ENSPMJG00000006291	ENSPMJG00000006297	COL18A1 (ENSPMJG00000006305) #14	SLC19A1 (ENSPMJG00000006343) #15	PCBP3 (ENSPMJG00000006345)	ENSPMJG00000006352	COL6A2 (ENSPMJG00000006389) #17	FTCD (ENSPMJG00000006430) #18	ENSPMJG00000006435	MCM3AP (ENSPMJG00000006438) #21	YBEY (ENSPMJG00000006440) #22	ENSPMJG00000006441 #13	ENSPMJG00000006442	UGT1A1 (ENSPMJG00000006443)	SH3BP4 (ENSPMJG00000006446)	ARL4C (ENSPMJG00000006522)	SPP2 (ENSPMJG00000006527)	ENSPMJG00000006532	TRPM8 (ENSPMJG00000006537)	AGAP1 (ENSPMJG00000006600)	ENSPMJG00000006646	GBX2 (ENSPMJG00000006648)	ASB18 (ENSPMJG00000006649)	ENSPMJG00000006652	ACKR3 (ENSPMJG00000006683)	COPS8 (ENSPMJG00000006686)
Australian saltwater crocodile	MODERN SPECIES	66	ENSCPRG00005005704	AGAP1 (ENSCPRG00005005814)	GBX2 (ENSCPRG00005005853)	ASB18 (ENSCPRG00005005897)	IQCA1 (ENSCPRG00005005928)	ACKR3 (ENSCPRG00005005948)	ENSCPRG00005005949	COPS8 (ENSCPRG00005005990)	COL6A3 (ENSCPRG00005006067)	MLPH (ENSCPRG00005006256)	PRLH (ENSCPRG00005006285)	RAB17 (ENSCPRG00005006290)	LRRFIP1 (ENSCPRG00005006318)	ENSCPRG00005006347	MCM3AP (ENSCPRG00005006390) #21	YBEY (ENSCPRG00005006741) #22	POFUT2 (ENSCPRG00005006796) #13	ADARB1 (ENSCPRG00005007061) #12	SLX9 (ENSCPRG00005007076) #11	ITGB2 (ENSCPRG00005007177) #10	KMO (ENSCPRG00005007817)	PCNT (ENSCPRG00005007860)	DIP2A (ENSCPRG00005008003) #23	ENSCPRG00005008040	ENSCPRG00005008054	S100B (ENSCPRG00005008057) #24	LSS (ENSCPRG00005008065) #20	FTCD (ENSCPRG00005008102) #18	COL6A2 (ENSCPRG00005008124) #17	ENSCPRG00005008137	ENSCPRG00005008155
Anura	ANCESTRAL SPECIES	7	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000160494	ENSGT00390000016619.a	ENSGT00940000156472	ENSGT00390000005923	ENSGT00940000160909	ENSGT00940000158212.B #14	ENSGT00950000183022.b #15	ENSGT00940000162768.B #16	ENSGT00940000163601	ENSGT00940000155682 #17	ENSGT00390000005581.a #18	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514	ENSGT00960000191699	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #23	ENSGT00940000160683 #25	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00530000063273.b.b	ENSGT00940000159677.c.a	ENSGT00940000159677.c.b.a.f	ENSGT00940000159677.c.b.a.e.a	ENSGT00390000013151.a.a
Frog	MODERN SPECIES	9	pde1a (ENSXETG00000030679)	dnajc10 (ENSXETG00000025050)	frzb (ENSXETG00000001339)	nckap1 (ENSXETG00000001337)	dusp19 (ENSXETG00000001336)	nup35 (ENSXETG00000001335)	znf804a (ENSXETG00000039111)	col18a1 (ENSXETG00000011481) #14	slc19a1 (ENSXETG00000011482) #15	pcbp1 (ENSXETG00000011483) #16	col6a2 (ENSXETG00000011490) #17	ftcd (ENSXETG00000011494) #18	ENSXETG00000045954	ENSXETG00000035341	mcm3ap (ENSXETG00000011496) #21	ybey (ENSXETG00000035034) #22	tmem65 (ENSXETG00000011506)	ENSXETG00000043010	pcnt (ENSXETG00000033996)	lss (ENSXETG00000004899) #20	dip2a (ENSXETG00000030597) #23	prmt2 (ENSXETG00000031494) #25	ugt1a1 (ENSXETG00000030758)	ENSXETG00000036379	ndufa10 (ENSXETG00000004886)	ENSXETG00000044440	hdac4 (ENSXETG00000004880)	ENSXETG00000035899	asb1 (ENSXETG00000004879)	ag1 (ENSXETG00000004878)	ENSXETG00000044141
Leishan spiny toad	MODERN SPECIES	10	INO80D (ENSLLEG00000026673)	ENSLLEG00000026634	ENSLLEG00000026571	ENSLLEG00000026550	ENSLLEG00000026502 #14	ENSLLEG00000026468	SLC19A1 (ENSLLEG00000026312) #15	ENSLLEG00000026251 #16	ENSLLEG00000024478	COL6A2 (ENSLLEG00000023804) #17	PPIL1 (ENSLLEG00000023656)	ENSLLEG00000023607	FTCD (ENSLLEG00000023256) #18	LSS (ENSLLEG00000021758) #20	MCM3AP (ENSLLEG00000020937) #21	YBEY (ENSLLEG00000020697) #22	C21orf58 (ENSLLEG00000020591)	ENSLLEG00000020568	ENSLLEG00000019716	DIP2A (ENSLLEG00000019176) #23	PRMT2 (ENSLLEG00000019029) #25	ENSLLEG00000018991	NDUFA10 (ENSLLEG00000016937)	HDAC4 (ENSLLEG00000016167)	ENSLLEG00000016118	ENSLLEG00000016097	ASB1 (ENSLLEG00000016008)	TRAF3IP1 (ENSLLEG00000015779)	ENSLLEG00000019265	ENSLLEG00000019208	ENSLLEG00000019128
Coelacanth	MODERN SPECIES	627											ENSLACG00000005882	ENSLACG00000008603	ENSLACG00000009797	LSS (ENSLACG00000010380) #20	MCM3AP (ENSLACG00000010838) #21	YBEY (ENSLACG00000011567) #22	C21orf58 (ENSLACG00000011823)	hnmt (ENSLACG00000012024)	ENSLACG00000022203 #19	FTCD (ENSLACG00000012351) #18	ENSLACG00000012612 ##8	ABCA12 (ENSLACG00000014253)	ENSLACG00000014837	VWC2L (ENSLACG00000015603)
Actinopterygii	ANCESTRAL SPECIES	256								ENSGT00940000156160	ENSGT00390000000862	ENSGT00940000157916	ENSGT00950000183019.f.b.b	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225	ENSGT00940000156180.e	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b
Neopterygii	ANCESTRAL SPECIES	42	ENSGT00390000015143	ENSGT00390000012446	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000005581.a #18	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225	ENSGT00940000156180.e	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992 #12	ENSGT00530000063273.b.b	ENSGT00720000108822	ENSGT00940000153969.b
Osteoglossocephalai	ANCESTRAL SPECIES	18	ENSGT01050000244905.D	ENSGT00390000006303	ENSGT00390000015143	ENSGT01040000240966	ENSGT00390000012446	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000005581.a #18	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225	ENSGT00940000156180.e	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a #10	ENSGT00390000015709 #11	ENSGT00940000155992.d #12	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503
Clupeocephala	ANCESTRAL SPECIES	129	ENSGT01050000244905.D	ENSGT00390000006303	ENSGT00390000015143	ENSGT00390000007295	ENSGT00390000012446	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225	ENSGT00940000156180.e	ENSGT00390000015709 #11	ENSGT00940000155992.c.b #12	ENSGT00390000009029	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a #10	ENSGT00940000155992.c.a #12	ENSGT00530000063273.b.a.a
Otomorpha	ANCESTRAL SPECIES	124	ENSGT00390000006303	ENSGT00390000015143	ENSGT00390000007295	ENSGT01040000240966	ENSGT00390000012446	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a #10	ENSGT00940000155992.c.a #12	ENSGT00530000063273.b.a.a	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000166532	ENSGT00940000157440.m.a
Otophysi	ANCESTRAL SPECIES	102																ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000156322 #21	ENSGT00390000011570 #20	ENSGT00390000008796	ENSGT00940000158398	ENSGT00940000164835	ENSGT00930000151029.i.a	ENSGT00940000157406	ENSGT00940000160130	ENSGT00710000106813.A	ENSGT00530000065251.a.b.a
Cyprinoidei	ANCESTRAL SPECIES	389																ENSGT00950000183170.b.b #22	ENSGT00940000158091
Cyprininae	ANCESTRAL SPECIES	448	ENSGT00390000000367.p	ENSGT00940000155752.e	ENSGT00390000012561.b.qb.b	ENSGT00990000204171.a.a.a	ENSGT01030000235037.b	ENSGT00940000158367.f.e	ENSGT00940000155177.a.c	ENSGT00940000165332.B.c	ENSGT00940000164866.u.a	ENSGT00950000182997.a.b.b.a.g.b #23	ENSGT00530000064199.d.c	ENSGT00390000010316.gb	ENSGT00950000182997.a.b.b.a.h #23	ENSGT00530000064199.d.d	ENSGT00390000010316.hb	ENSGT00950000183170.b.b #22	ENSGT00940000158091.c	ENSGT00940000158091.d	ENSGT00580000081600.c.b.r	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b.a.b	ENSGT00940000170561.a.b
Cyprininae_a	ANCESTRAL SPECIES	237	ENSGT00940000157088.d	ENSGT00390000000367.p	ENSGT00940000155752.e	ENSGT00390000012561.b.qb.b	ENSGT00990000204171.a.a.a	ENSGT01030000234540.A.b	ENSGT01030000235037.a.a	ENSGT00940000158367.f.e	ENSGT00940000155177.a.d.a	ENSGT00940000165332.B.c	ENSGT00940000164866.u.a.a	ENSGT00950000182997.a.b.b.a.h #23	ENSGT00530000064199.d.d	ENSGT00390000010316.hb	ENSGT00390000010316.gb	ENSGT00950000183170.b.b #22	ENSGT00940000158091.c	ENSGT00940000158091.d	ENSGT00580000081600.c.b.r	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b.a.b	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352.b	ENSGT00940000154846.b.c	ENSGT00390000006225.g	ENSGT00940000156402.A.b.a	ENSGT00950000182897.B.a.b.b.a	ENSGT00940000160594.g.b.a.a	ENSGT00940000155318.b.a.f
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	382	bzw1b (ENSSGRG00000054332)	ENSSGRG00000054330	ENSSGRG00000054327	ENSSGRG00000054322	ENSSGRG00000054321	ENSSGRG00000054320	ENSSGRG00000054318	ENSSGRG00000054315	ENSSGRG00000054314	ft1 (ENSSGRG00000054313)	ENSSGRG00000054312	ENSSGRG00000054310	ENSSGRG00000054309	DIP2A (ENSSGRG00000053970) #23	ndufb3 (ENSSGRG00000053923)	YBEY (ENSSGRG00000053922) #22	ENSSGRG00000053921	usp37 (ENSSGRG00000053908)	insig2 (ENSSGRG00000053903)	ENSSGRG00000053902	ENSSGRG00000053900	ENSSGRG00000053899	ENSSGRG00000053898
Golden-line barbel	MODERN SPECIES	379	CLN5 (ENSSGRG00000038603)	STX19 (ENSSGRG00000038641)	EPHA3 (ENSSGRG00000038642)	C3orf38 (ENSSGRG00000038644)	MYO1B (ENSSGRG00000038736)	ENSSGRG00000042160	bzw1b (ENSSGRG00000042164)	ENSSGRG00000042268	ENSSGRG00000042269	ENSSGRG00000042272	ENSSGRG00000042274	ENSSGRG00000042275	DIP2A (ENSSGRG00000042333) #23	ENSSGRG00000043579	ndufb3 (ENSSGRG00000043580)	ENSSGRG00000043581 #22	usp37 (ENSSGRG00000043585)	insig2 (ENSSGRG00000043646)	ENSSGRG00000043656	C1QL2 (ENSSGRG00000043657)	ENSSGRG00000043661	ENSSGRG00000043662	ENSSGRG00000043665	ENSSGRG00000043666	STEAP3 (ENSSGRG00000043667)	zgc:101851 (ENSSGRG00000043668)	dbi (ENSSGRG00000043669)	tmem37 (ENSSGRG00000043672)	ENSSGRG00000043674	ENSSGRG00000043675	ENSSGRG00000043679
Common carp reference	MODERN SPECIES	46	CLN5 (ENSCCRG00000063282)	ENSCCRG00000053675	ENSCCRG00000033868	ENSCCRG00000002228	ENSCCRG00000030050	ENSCCRG00000019249	ENSCCRG00000082366	ENSCCRG00000061787	ENSCCRG00000041891	ENSCCRG00000041897	ENSCCRG00000077311	ENSCCRG00000018398	ENSCCRG00000018404	ENSCCRG00000079360	ENSCCRG00000045787 #23	ybey (ENSCCRG00000037152) #22	usp37 (ENSCCRG00000037144)	insig2 (ENSCCRG00000046577)	en1a (ENSCCRG00000046568)	ENSCCRG00000046562	C1QL2 (ENSCCRG00000071761)	ENSCCRG00000077247	ENSCCRG00000079837	ENSCCRG00000064516	ENSCCRG00000034444	ENSCCRG00000079733	ENSCCRG00000057401	ENSCCRG00000039058	zgc:101851 (ENSCCRG00000024056)	dbi (ENSCCRG00000052059)	tmem37 (ENSCCRG00000052058)
Goldfish	MODERN SPECIES	49	ENSCARG00000040160	ENSCARG00000040184	ENSCARG00000040218	ENSCARG00000040340	ENSCARG00000040367	ENSCARG00000040397	ENSCARG00000040421	ENSCARG00000040430	ENSCARG00000040586	ENSCARG00000040615	ENSCARG00000040649	ENSCARG00000040659	DIP2A (ENSCARG00000041000) #23	ENSCARG00000052363	ndufb3 (ENSCARG00000052374)	ybey (ENSCARG00000052393) #22	usp37 (ENSCARG00000052424)	insig2 (ENSCARG00000052545)	en1a (ENSCARG00000052604)	ENSCARG00000052618	C1QL2 (ENSCARG00000052630)	ENSCARG00000052695	ENSCARG00000052770	ENSCARG00000052801	agps (ENSCARG00000052897)	nfe2l2a (ENSCARG00000053298)	hnrnpa3 (ENSCARG00000053330)	hoxd3a (ENSCARG00000053452)	hoxd4a (ENSCARG00000053463)	hoxd9a (ENSCARG00000053478)	hoxd10a (ENSCARG00000053495)
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	24	actr5 (ENSDARG00000098235)	ENSDARG00000099980	zgc:158320 (ENSDARG00000099373)	ENSDARG00000099207	bzw1b (ENSDARG00000099148)	ENSDARG00000098461	igsf3l (ENSDARG00000104716)	ENSDARG00000099799	ENSDARG00000100887	ENSDARG00000078172	ENSDARG00000098640	ENSDARG00000098204	DIP2A (ENSDARG00000078058) #23	ENSDARG00000074802	ndufb3 (ENSDARG00000075709)	ybey (ENSDARG00000011999) #22	usp37 (ENSDARG00000040990)	insig2 (ENSDARG00000113367)	en1a (ENSDARG00000014321)	ENSDARG00000059294	C1QL2 (ENSDARG00000015592)	ENSDARG00000097420	STEAP3 (ENSDARG00000075641)	C9H2orf76 (ENSDARG00000037199)	dbi (ENSDARG00000026369)	tmem37 (ENSDARG00000059305)	sctr (ENSDARG00000101077)	ENSDARG00000077553	ENSDARG00000112056	DOCK9 (ENSDARG00000114086)	SLC15A1 (ENSDARG00000100315)
Zebrafish	MODERN SPECIES	1116																YBEY (ENSDARG00000110510) #22
Characiphysae	ANCESTRAL SPECIES	53	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00990000205434	ENSGT00940000159765	ENSGT00940000155324	ENSGT00940000157440.m.a	ENSGT00940000166532	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00530000063273.b.a.a	ENSGT00940000155992.c.a #12	ENSGT01090000259987.a.a.a #10	ENSGT00940000160544	ENSGT00940000167133.b	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000156322 #21	ENSGT00390000011570 #20	ENSGT00390000008796	ENSGT00940000158398	ENSGT00940000164835	ENSGT00930000151029.i.a	ENSGT00940000157406	ENSGT00940000160130	ENSGT00710000106813.A	ENSGT00530000065251.a.b.a
Channel catfish	MODERN SPECIES	25	ENSIPUG00000008011	ENSIPUG00000008025	gjc1 (ENSIPUG00000008046)	LCT (ENSIPUG00000008064)	hdac4 (ENSIPUG00000008109)	twist2 (ENSIPUG00000008180)	ENSIPUG00000008188	asb1 (ENSIPUG00000008202)	traf3ip1 (ENSIPUG00000008244)	Agr3 (ENSIPUG00000008301)	ADARB1 (ENSIPUG00000008384) #12	itgb2 (ENSIPUG00000008568) #10	VIL1 (ENSIPUG00000008763)	zgc:66484 (ENSIPUG00000008853)	zgc:66484 (ENSIPUG00000008887)	ybey (ENSIPUG00000008896) #22	usp37 (ENSIPUG00000008920)	PLCD4 (ENSIPUG00000009004)	znf142 (ENSIPUG00000009049)	bcs1l (ENSIPUG00000009065)	ENSIPUG00000009074	ENSIPUG00000009127	ENSIPUG00000009162	ENSIPUG00000009205 #21	lss (ENSIPUG00000009276) #20	lmln (ENSIPUG00000009362)	osbpl11 (ENSIPUG00000009450)	ENSIPUG00000009530	snx4 (ENSIPUG00000009547)	znf148 (ENSIPUG00000009606)	slc12a8 (ENSIPUG00000009626)
Characiphysae_b	ANCESTRAL SPECIES	119	ENSGT00940000158542.b	ENSGT00990000205434	ENSGT00940000159765	ENSGT00940000155324	ENSGT00940000157440.m.a	ENSGT00940000166532	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00530000063273.b.a.a	ENSGT00940000155992.c.a #12	ENSGT01090000259987.a.a.a #10	ENSGT00940000160544	ENSGT00940000167133.b	ENSGT00940000167133.a	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000156322 #21	ENSGT00390000011570 #20	ENSGT00390000008796	ENSGT00940000158398	ENSGT00940000164835	ENSGT00930000151029.i.a	ENSGT00940000157406	ENSGT00940000160130	ENSGT00710000106813.A	ENSGT00530000065251.a.b.a
Electric eel	MODERN SPECIES	140	igfbp2b (ENSEEEG00000011438)	slc4a3 (ENSEEEG00000011460)	gjc4b (ENSEEEG00000012012)	LCT (ENSEEEG00000012029)	hdac4 (ENSEEEG00000012099)	ENSEEEG00000012328	ENSEEEG00000012330	asb1 (ENSEEEG00000012334)	traf3ip1 (ENSEEEG00000012347)	agr1 (ENSEEEG00000012349)	ADARB1 (ENSEEEG00000012351) #12	ENSEEEG00000012409 #10	vil1 (ENSEEEG00000013239)	zgc:66484 (ENSEEEG00000013249)	zgc:66484 (ENSEEEG00000013254)	ybey (ENSEEEG00000013258) #22	usp37 (ENSEEEG00000013261)	PLCD4 (ENSEEEG00000013317)	ZNF142 (ENSEEEG00000013617)	bcs1l (ENSEEEG00000013618)	ENSEEEG00000013621
Characoidei	ANCESTRAL SPECIES	43	ENSGT00940000158542.b	ENSGT00990000205434	ENSGT00940000159765	ENSGT00940000155324	ENSGT00940000157440.m.a	ENSGT00940000166532	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00530000063273.b.a.a	ENSGT00940000155992.c.a #12	ENSGT01090000259987.a.a.a #10	ENSGT00940000160544	ENSGT00940000167133.b	ENSGT00940000167133.a	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000156322 #21	ENSGT00390000011570 #20	ENSGT00390000008796	ENSGT00940000158398	ENSGT00940000164835	ENSGT00930000151029.i.a	ENSGT00940000157406	ENSGT00940000160130	ENSGT00710000106813.A	ENSGT00530000065251.a.b.a.d.a.a
Red-bellied piranha	MODERN SPECIES	19	ENSPNAG00000003033	slc4a3 (ENSPNAG00000014116)	gjc4b (ENSPNAG00000013983)	LCT (ENSPNAG00000013965)	hdac4 (ENSPNAG00000013918)	twist2 (ENSPNAG00000013851)	ENSPNAG00000013829	asb1 (ENSPNAG00000013817)	traf3ip1 (ENSPNAG00000013791)	agr1 (ENSPNAG00000002875)	ADARB1 (ENSPNAG00000013623) #12	ITGB2 (ENSPNAG00000002833) #10	vil1 (ENSPNAG00000013471)	zgc:66484 (ENSPNAG00000013445)	zgc:66484 (ENSPNAG00000013439)	ybey (ENSPNAG00000013432) #22	usp37 (ENSPNAG00000013408)	PLCD4 (ENSPNAG00000013313)	ZNF142 (ENSPNAG00000013304)	bcs1l (ENSPNAG00000013296)	zgc:136333 (ENSPNAG00000002673)	ENSPNAG00000002665 #21	lss (ENSPNAG00000002618) #20	ENSPNAG00000013132	LMLN (ENSPNAG00000013123)	OSBPL11 (ENSPNAG00000013061)	ENSPNAG00000013024	snx4 (ENSPNAG00000002508)	znf148 (ENSPNAG00000012964)	slc12a8 (ENSPNAG00000012947)	heg1 (ENSPNAG00000012899)
Mexicana tetra	MODERN SPECIES	10	slc4a3 (ENSAMXG00000018140)	gjc4b (ENSAMXG00000034738)	LCT (ENSAMXG00000018232)	ENSAMXG00000034929	hdac4 (ENSAMXG00000018271)	twist2 (ENSAMXG00000025095)	ENSAMXG00000033305	asb1 (ENSAMXG00000018329)	traf3ip1 (ENSAMXG00000018335)	agr1 (ENSAMXG00000018349)	ADARB1 (ENSAMXG00000018363) #12	ENSAMXG00000006182 #10	vil1 (ENSAMXG00000006174)	zgc:66484 (ENSAMXG00000006171)	zgc:66484 (ENSAMXG00000006168)	ybey (ENSAMXG00000034047) #22	usp37 (ENSAMXG00000006154)	PLCD4 (ENSAMXG00000006128)	ZNF142 (ENSAMXG00000006122)	bcs1l (ENSAMXG00000006114)	zgc:136333 (ENSAMXG00000006107)	MCM3AP (ENSAMXG00000006100) #21	lss (ENSAMXG00000006084) #20	OSBPL11 (ENSAMXG00000006058)	ENSAMXG00000006051	snx4 (ENSAMXG00000006049)	znf148 (ENSAMXG00000041870)	slc12a8 (ENSAMXG00000006033)	heg1 (ENSAMXG00000006022)	ENSAMXG00000041646	ENSAMXG00000042911
Clupeiformes	ANCESTRAL SPECIES	1	ENSGT00390000006303	ENSGT00390000015143	ENSGT00390000007295	ENSGT01040000240966	ENSGT00390000012446	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.a.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a #10	ENSGT00940000155992.c.a #12	ENSGT00530000063273.b.a.a	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000166532	ENSGT00940000157440.m.a	ENSGT00940000155324
Denticle herring	MODERN SPECIES	19	wdr75 (ENSDCDG00000029152)	slc40a1 (ENSDCDG00000029170)	zgc:136439 (ENSDCDG00000029173)	ENSDCDG00000029177	asnsd1 (ENSDCDG00000029179)	ankar (ENSDCDG00000029180)	osgepl1 (ENSDCDG00000029182)	adat3 (ENSDCDG00000029185)	ormdl1 (ENSDCDG00000029187)	pms1 (ENSDCDG00000029190)	mstnb (ENSDCDG00000029211)	ENSDCDG00000029217	hibch (ENSDCDG00000029231)	lss (ENSDCDG00000029428) #20	ENSDCDG00000029487 #21	ybey (ENSDCDG00000002958) #22	usp37 (ENSDCDG00000003072)	PLCD4 (ENSDCDG00000003555)	ZNF142 (ENSDCDG00000007232)	bcs1l (ENSDCDG00000007247)	zgc:66484 (ENSDCDG00000007271)	vil1 (ENSDCDG00000007442)	ENSDCDG00000008208 #10	ADARB1 (ENSDCDG00000014527) #12	agr1 (ENSDCDG00000014532)	traf3ip1 (ENSDCDG00000014540)	asb1 (ENSDCDG00000014550)	ENSDCDG00000014555	twist2 (ENSDCDG00000014559)	hdac4 (ENSDCDG00000014871)	LCT (ENSDCDG00000022790)
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000026136	ENSCHAG00000026135	ENSCHAG00000026132	ENSCHAG00000026130	ENSCHAG00000026127	ENSCHAG00000026126	ENSCHAG00000026125	DIP2A (ENSCHAG00000020479) #23	ENSCHAG00000020232	ndufb3 (ENSCHAG00000020222)	ENSCHAG00000020206	ildr2 (ENSCHAG00000020165)	ildr1b (ENSCHAG00000020133)	mstnb (ENSCHAG00000020104)	hibch (ENSCHAG00000019924)	ybey (ENSCHAG00000019901) #22	usp37 (ENSCHAG00000019699)	PLCD4 (ENSCHAG00000018630)	ZNF142 (ENSCHAG00000018604)	bcs1l (ENSCHAG00000018419)	zgc:66484 (ENSCHAG00000018405)	vil1 (ENSCHAG00000016936)	ENSCHAG00000016245 #10	ADARB1 (ENSCHAG00000015951) #12	ENSCHAG00000015938 ##10	traf3ip1 (ENSCHAG00000015904)	asb1 (ENSCHAG00000015893)	ENSCHAG00000015873	twist2 (ENSCHAG00000015867)	hdac4 (ENSCHAG00000012588)	LCT (ENSCHAG00000012457)
Euteleosteomorpha	ANCESTRAL SPECIES	153	ENSGT00390000006303	ENSGT00390000015143	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a.p #10	ENSGT00940000155992.c.a #12	ENSGT00530000063273.b.a.a	ENSGT00940000178952	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503
Acanthomorphata	ANCESTRAL SPECIES	88	ENSGT00390000015143	ENSGT01020000230587	ENSGT00390000012446	ENSGT00390000007295	ENSGT00390000017045	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00390000015143	ENSGT01020000230587	ENSGT00390000012446	ENSGT00390000007295	ENSGT00390000017045	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Percomorphaceae	ANCESTRAL SPECIES	29	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Aplocheiloidei	ANCESTRAL SPECIES	241															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B
Mangrove rivulus	MODERN SPECIES	136		ENSKMAG00000018601	lrrc3 (ENSKMAG00000018588)	pcbp3 (ENSKMAG00000018530) #16	ENSKMAG00000018460	ENSKMAG00000018283	CTDSP1 (ENSKMAG00000018212)	ENSKMAG00000018133	ENSKMAG00000018105	nabp1a (ENSKMAG00000018072)	cavin2a (ENSKMAG00000018058)	tmeff2a (ENSKMAG00000018018)	ENSKMAG00000018000	slc39a10 (ENSKMAG00000017958)	ENSKMAG00000017908 #21	ybey (ENSKMAG00000017890) #22	usp37 (ENSKMAG00000017787)	cnot9 (ENSKMAG00000017715)	PLCD4 (ENSKMAG00000017684)	ZNF142 (ENSKMAG00000017660)	bcs1l (ENSKMAG00000017637)	zgc:136333 (ENSKMAG00000017556)	ENSKMAG00000017529	ENSKMAG00000017511
Turquoise killifish	MODERN SPECIES	408															ENSNFUG00015017543 #21	ybey (ENSNFUG00015017595) #22	usp37 (ENSNFUG00015017626)	RQCD1 (ENSNFUG00015017817)	PLCD4 (ENSNFUG00015017897)	ZNF142 (ENSNFUG00015019936)
Cyprinodontoidei	ANCESTRAL SPECIES	30	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273
Poeciliinae	ANCESTRAL SPECIES	29	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Poecilia	ANCESTRAL SPECIES	46	ENSGT00940000159964	ENSGT00940000153744.A.f	ENSGT00940000153744.A.e.a	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B.i	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
NAME_6	ANCESTRAL SPECIES	68	ENSGT00940000153744.A.e.a	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b.c	ENSGT00940000165813.b.d	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00390000013973.B.h	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B.i	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Amazon molly	MODERN SPECIES	299						ENSPFOG00000011795	pms1 (ENSPFOG00000011839)	mstnb (ENSPFOG00000021946)	mstnb (ENSPFOG00000012130)	ddt (ENSPFOG00000012202)	gstt1b (ENSPFOG00000012223)	hibch (ENSPFOG00000012275)	lss (ENSPFOG00000012442) #20	ENSPFOG00000012841	ENSPFOG00000012860 #21	ybey (ENSPFOG00000013092) #22	usp37 (ENSPFOG00000013121)	cnot9 (ENSPFOG00000013296)	PLCD4 (ENSPFOG00000013304)	ZNF142 (ENSPFOG00000013660)	bcs1l (ENSPFOG00000013687)	CYP27A1 (ENSPFOG00000024088)	ENSPFOG00000013767	TNS1 (ENSPFOG00000013948)	igfbp5b (ENSPFOG00000014472)	igfbp2b (ENSPFOG00000014498)	slc4a3 (ENSPFOG00000014529)	ENSPFOG00000014959	gulp1a (ENSPFOG00000015272)	ENSPFOG00000015315	ENSPFOG00000015333
Sailfin molly	MODERN SPECIES	142												ENSPLAG00000021596	ENSPLAG00000021589	ENSPLAG00000021586	ENSPLAG00000021578 #21	ybey (ENSPLAG00000021550) #22	usp37 (ENSPLAG00000021547)	cnot9 (ENSPLAG00000021539)	PLCD4 (ENSPLAG00000021512)	ZNF142 (ENSPLAG00000021487)	bcs1l (ENSPLAG00000021477)	CYP27A1 (ENSPLAG00000021467)	CYP27A1 (ENSPLAG00000021420)	TNS1 (ENSPLAG00000021354)
Guppy	MODERN SPECIES	450	fkbp7 (ENSPREG00000001186)	osgepl1 (ENSPREG00000001167)	alkbh6 (ENSPREG00000001145)	adat3 (ENSPREG00000001135)	ormdl1 (ENSPREG00000001117)	pms1 (ENSPREG00000001098)	mstnb (ENSPREG00000001076)	ddt (ENSPREG00000000981)	gstt1b (ENSPREG00000000954)	ENSPREG00000000948	hibch (ENSPREG00000000941)	lss (ENSPREG00000000862) #20	ENSPREG00000000852	ENSPREG00000000836	ENSPREG00000000812 #21	ybey (ENSPREG00000000796) #22	usp37 (ENSPREG00000000789)	cnot9 (ENSPREG00000000758)	PLCD4 (ENSPREG00000000734)	ZNF142 (ENSPREG00000000722)	bcs1l (ENSPREG00000000620)	CYP27A1 (ENSPREG00000000548)	ENSPREG00000000541	ENSPREG00000000540	ENSPREG00000020879	igfbp5b (ENSPREG00000020870)	igfbp2b (ENSPREG00000020866)	slc4a3 (ENSPREG00000020828)	COL5A2 (ENSPREG00000020747)	gulp1a (ENSPREG00000020679)	ENSPREG00000020656
Platyfish	MODERN SPECIES	21	mmadhcb (ENSXMAG00000019818)	slc40a1 (ENSXMAG00000029620)	wdr75 (ENSXMAG00000005811)	ENSXMAG00000022033	ENSXMAG00000005845	ENSXMAG00000005850	fkbp7 (ENSXMAG00000005881)	osgepl1 (ENSXMAG00000005885)	ormdl1 (ENSXMAG00000005900)	adat3 (ENSXMAG00000005897)	pms1 (ENSXMAG00000005904)	ENSXMAG00000026653	hibch (ENSXMAG00000006425)	lss (ENSXMAG00000006445) #20	ENSXMAG00000015028 #21	ybey (ENSXMAG00000015012) #22	usp37 (ENSXMAG00000014971)	cnot9 (ENSXMAG00000006474)	PLCD4 (ENSXMAG00000006488)	ZNF142 (ENSXMAG00000024729)	bcs1l (ENSXMAG00000006514)	CYP27A1 (ENSXMAG00000006540)	ENSXMAG00000006529	ENSXMAG00000028776	TNS1 (ENSXMAG00000009264)	ENSXMAG00000028950	ENSXMAG00000021442	ENSXMAG00000026794	igfbp5b (ENSXMAG00000006558)	igfbp2b (ENSXMAG00000026555)	slc4a3 (ENSXMAG00000006572)
NAME_4	ANCESTRAL SPECIES	78	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570.f #20	ENSGT00390000013973.A.a.c.a.n	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.n	ENSGT00950000182905.a.a.a.a.b.m	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765.g	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273
Mummichog	MODERN SPECIES	1082															ENSFHEG00000001113 #21	ybey (ENSFHEG00000001108) #22	usp37 (ENSFHEG00000001100)	cnot9 (ENSFHEG00000001097)
Sheepshead minnow	MODERN SPECIES	257										ENSCVAG00000022778	ENSCVAG00000022748	hibch (ENSCVAG00000022738)	lss (ENSCVAG00000022724) #20	ENSCVAG00000022671	ENSCVAG00000022653 #21	ybey (ENSCVAG00000022642) #22	usp37 (ENSCVAG00000022633)	cnot9 (ENSCVAG00000022621)	PLCD4 (ENSCVAG00000022607)	ZNF142 (ENSCVAG00000022595)	bcs1l (ENSCVAG00000022527)	CYP27A1 (ENSCVAG00000022499)	ENSCVAG00000022455	NQO2 (ENSCVAG00000022450)	TNS1 (ENSCVAG00000022436)	igfbp5b (ENSCVAG00000022402)	igfbp2b (ENSCVAG00000022399)	ENSCVAG00000022395	slc4a3 (ENSCVAG00000022384)	COL5A2 (ENSCVAG00000022151)	gulp1a (ENSCVAG00000022087)
Oryzias	ANCESTRAL SPECIES	10	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Oryzias_a	ANCESTRAL SPECIES	45	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000161939	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Japanese Medaka HdrR	MODERN SPECIES	13	STAT4 (ENSORLG00000015180)	ENSORLG00000024182	GLS (ENSORLG00000015157)	fkbp7 (ENSORLG00000015126)	ENSORLG00000024865	alkbh6 (ENSORLG00000015103)	osgepl1 (ENSORLG00000015117)	ormdl1 (ENSORLG00000015100)	pms1 (ENSORLG00000015090)	mstnb (ENSORLG00000015057)	ENSORLG00000015048	hibch (ENSORLG00000015037)	LSS (ENSORLG00000015003) #20	lss (ENSORLG00000028452) #20	MCM3AP (ENSORLG00000014980) #21	ybey (ENSORLG00000023922) #22	usp37 (ENSORLG00000014960)	cnot9 (ENSORLG00000014925)	PLCD4 (ENSORLG00000014901)	ZNF142 (ENSORLG00000014849)	bcs1l (ENSORLG00000014823)	zgc:136333 (ENSORLG00000014811)	ENSORLG00000028136	TNS1 (ENSORLG00000014781)	ENSORLG00000025476	ENSORLG00000022632	igfbp5b (ENSORLG00000030103)	igfbp2b (ENSORLG00000014695)	slc4a3 (ENSORLG00000030477)	COL5A2 (ENSORLG00000014658)	ENSORLG00000027152
Chinese medaka	MODERN SPECIES	703	STAT4 (ENSOSIG00000016441)	ENSOSIG00000016413	GLS (ENSOSIG00000012852)	fkbp7 (ENSOSIG00000012807)	DNAI2 (ENSOSIG00000012796)	osgepl1 (ENSOSIG00000012793)	alkbh6 (ENSOSIG00000012789)	adat3 (ENSOSIG00000012786)	ormdl1 (ENSOSIG00000012784)	pms1 (ENSOSIG00000012727)	mstnb (ENSOSIG00000012721)	ENSOSIG00000012720	hibch (ENSOSIG00000012281)	lss (ENSOSIG00000012228) #20	ENSOSIG00000012142 #21	ybey (ENSOSIG00000012136) #22	usp37 (ENSOSIG00000012075)	cnot9 (ENSOSIG00000012071)	PLCD4 (ENSOSIG00000010959)	ZNF142 (ENSOSIG00000010957)	bcs1l (ENSOSIG00000010956)	zgc:136333 (ENSOSIG00000010929)	ENSOSIG00000010923	TNS1 (ENSOSIG00000010884)
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00950000182996.b.b.c.b.h.b.a	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273
Indian medaka	MODERN SPECIES	18	STAT4 (ENSOMEG00000022328)	ENSOMEG00000022241	ENSOMEG00000022183	fkbp7 (ENSOMEG00000022136)	osgepl1 (ENSOMEG00000022115)	alkbh6 (ENSOMEG00000022075)	ormdl1 (ENSOMEG00000022066)	adat3 (ENSOMEG00000022041)	pms1 (ENSOMEG00000022030)	mstnb (ENSOMEG00000021961)	ENSOMEG00000021937	hibch (ENSOMEG00000021921)	lss (ENSOMEG00000021872) #20	lss (ENSOMEG00000021845) #20	ENSOMEG00000021796 #21	ybey (ENSOMEG00000021714) #22	usp37 (ENSOMEG00000021685)	cnot9 (ENSOMEG00000021642)	PLCD4 (ENSOMEG00000000898)	ZNF142 (ENSOMEG00000000914)	bcs1l (ENSOMEG00000021530)	zgc:136333 (ENSOMEG00000021503)	ENSOMEG00000021450	TNS1 (ENSOMEG00000021378)	igfbp5b (ENSOMEG00000020658)	igfbp2b (ENSOMEG00000020645)	igfbp2b (ENSOMEG00000020624)	slc4a3 (ENSOMEG00000020610)	COL5A2 (ENSOMEG00000020553)	gulp1a (ENSOMEG00000020451)	ENSOMEG00000020328
Javanese ricefish	MODERN SPECIES	13	STAT4 (ENSOJAG00000022942)	ENSOJAG00000022912	ENSOJAG00000022473	fkbp7 (ENSOJAG00000022365)	osgepl1 (ENSOJAG00000022351)	alkbh6 (ENSOJAG00000022343)	adat3 (ENSOJAG00000022338)	ormdl1 (ENSOJAG00000022329)	pms1 (ENSOJAG00000022261)	mstnb (ENSOJAG00000022229)	ENSOJAG00000022224	hibch (ENSOJAG00000022179)	lss (ENSOJAG00000021730) #20	ENSOJAG00000021686	MCM3AP (ENSOJAG00000021610) #21	ybey (ENSOJAG00000021589) #22	usp37 (ENSOJAG00000021547)	cnot9 (ENSOJAG00000021505)	PLCD4 (ENSOJAG00000021256)	ZNF142 (ENSOJAG00000021212)	bcs1l (ENSOJAG00000021174)	zgc:136333 (ENSOJAG00000021136)	ENSOJAG00000021120	TNS1 (ENSOJAG00000020938)	igfbp5b (ENSOJAG00000020921)	igfbp2b (ENSOJAG00000020918)	ENSOJAG00000020910	slc4a3 (ENSOJAG00000019855)	ENSOJAG00000019263	gulp1a (ENSOJAG00000019141)	ENSOJAG00000019121
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00710000108330	ENSGT00940000158542.b	ENSGT00940000155890.a.a	ENSGT00940000155400.B	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074	ENSGT00940000156180.f	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00390000017045	ENSGT00390000005949
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00710000108330	ENSGT00940000158542.b	ENSGT00940000155890.a.a	ENSGT00940000155400.B	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074	ENSGT00940000156180.f	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00390000017045	ENSGT00390000005949
Nile tilapia	MODERN SPECIES	7	ENSONIG00000029054	TNS1 (ENSONIG00000007182)	zgc:136333 (ENSONIG00000007177)	ENSONIG00000032736	bcs1l (ENSONIG00000007176)	ZNF142 (ENSONIG00000007174)	PLCD4 (ENSONIG00000007170)	ormdl1 (ENSONIG00000018245)	pms1 (ENSONIG00000007164)	mstnb (ENSONIG00000007163)	ENSONIG00000020754	hibch (ENSONIG00000007161)	ENSONIG00000041682	lss (ENSONIG00000016840) #20	ENSONIG00000016836 #21	ybey (ENSONIG00000042756) #22	usp37 (ENSONIG00000016831)	cnot9 (ENSONIG00000016830)	zgc:136439 (ENSONIG00000038295)	asnsd1 (ENSONIG00000016829)	ENSONIG00000038814	slc40a1 (ENSONIG00000032283)	wdr75 (ENSONIG00000016827)	STAT4 (ENSONIG00000016817)	ENSONIG00000040122	ENSONIG00000016812	fkbp7 (ENSONIG00000016810)	osgepl1 (ENSONIG00000016808)	alkbh6 (ENSONIG00000035409)	adat3 (ENSONIG00000021155)	SYMPK (ENSONIG00000016802)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00710000108330	ENSGT00940000158542.b	ENSGT00940000155890.a.a	ENSGT00940000155400.B	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074	ENSGT00940000156180.f	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b
Lyretail cichlid	MODERN SPECIES	485						ZNF142 (ENSNBRG00000019248)	PLCD4 (ENSNBRG00000019214)	ormdl1 (ENSNBRG00000019200)	pms1 (ENSNBRG00000019179)	ENSNBRG00000019021	mstnb (ENSNBRG00000018976)	ENSNBRG00000018970	hibch (ENSNBRG00000018847)	lss (ENSNBRG00000018750) #20	ENSNBRG00000018677 #21	ybey (ENSNBRG00000018657) #22	usp37 (ENSNBRG00000018529)	cnot9 (ENSNBRG00000018481)	zgc:136439 (ENSNBRG00000018466)	asnsd1 (ENSNBRG00000018455)	slc40a1 (ENSNBRG00000018434)	ENSNBRG00000018422	ENSNBRG00000018406	STAT4 (ENSNBRG00000018367)	ENSNBRG00000018353	ENSNBRG00000018284	ENSNBRG00000018243	FKBP7 (ENSNBRG00000018221)	osgepl1 (ENSNBRG00000018198)	alkbh6 (ENSNBRG00000018188)	adat3 (ENSNBRG00000018179)
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00710000108330	ENSGT00940000158542.b	ENSGT00940000155890.a.a	ENSGT00940000155400.B	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074	ENSGT00940000156180.f	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b
Burton s mouthbrooder	MODERN SPECIES	544									ormdl1 (ENSHBUG00000022540)	pms1 (ENSHBUG00000022546)	mstnb (ENSHBUG00000022560)	ENSHBUG00000022570	hibch (ENSHBUG00000022595)	lss (ENSHBUG00000000696) #20	ENSHBUG00000022726 #21	ybey (ENSHBUG00000022755) #22	usp37 (ENSHBUG00000022775)	cnot9 (ENSHBUG00000022819)	zgc:136439 (ENSHBUG00000022876)	asnsd1 (ENSHBUG00000022898)	slc40a1 (ENSHBUG00000022927)	wdr75 (ENSHBUG00000023108)	STAT4 (ENSHBUG00000000711)	ENSHBUG00000023262	ENSHBUG00000023387	fkbp7 (ENSHBUG00000023447)	osgepl1 (ENSHBUG00000023523)	alkbh6 (ENSHBUG00000023541)	adat3 (ENSHBUG00000023550)	SYMPK (ENSHBUG00000023564)	SLC35F5 (ENSHBUG00000023580)
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00710000108330	ENSGT00940000158542.b	ENSGT00940000155890.a.a	ENSGT00940000155400.B	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074	ENSGT00940000156180.f	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b
P. nyererei	MODERN SPECIES	366	ENSPNYG00000012622	igfbp2b (ENSPNYG00000012612)	igfbp5b (ENSPNYG00000012598)	TNS1 (ENSPNYG00000012484)	zgc:136333 (ENSPNYG00000012405)	bcs1l (ENSPNYG00000012374)	ZNF142 (ENSPNYG00000012329)	PLCD4 (ENSPNYG00000012295)	ormdl1 (ENSPNYG00000012277)	pms1 (ENSPNYG00000012259)	mstnb (ENSPNYG00000012235)	ENSPNYG00000012220	hibch (ENSPNYG00000012136)	lss (ENSPNYG00000011989) #20	ENSPNYG00000011931 #21	ybey (ENSPNYG00000011909) #22	usp37 (ENSPNYG00000011888)	cnot9 (ENSPNYG00000011857)	zgc:136439 (ENSPNYG00000011840)	asnsd1 (ENSPNYG00000011819)	slc40a1 (ENSPNYG00000011792)	wdr75 (ENSPNYG00000011767)	STAT4 (ENSPNYG00000011623)	ENSPNYG00000011587	ENSPNYG00000011543	fkbp7 (ENSPNYG00000011516)	osgepl1 (ENSPNYG00000011500)	alkbh6 (ENSPNYG00000011487)	adat3 (ENSPNYG00000011478)	SYMPK (ENSPNYG00000011455)	SLC35F5 (ENSPNYG00000011426)
Haplochromini_B	ANCESTRAL SPECIES	39	ENSGT00710000108330	ENSGT00940000158542.b	ENSGT00940000155890.a.a	ENSGT00940000155400.B	ENSGT00950000182905.a.a.a.a.b	ENSGT00390000005415	ENSGT00940000163074	ENSGT00940000156180.f	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00390000007295	ENSGT00390000012446	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b
Zebra mbuna	MODERN SPECIES	1098	igfbp2b (ENSMZEG00005014636)	igfbp5b (ENSMZEG00005014633)	TNS1 (ENSMZEG00005014600)	ENSMZEG00005014583	zgc:136333 (ENSMZEG00005014558)	bcs1l (ENSMZEG00005014547)	ZNF142 (ENSMZEG00005014543)	PLCD4 (ENSMZEG00005014505)	ormdl1 (ENSMZEG00005014486)	pms1 (ENSMZEG00005014474)	mstnb (ENSMZEG00005014466)	ENSMZEG00005014463	hibch (ENSMZEG00005014450)	lss (ENSMZEG00005014423) #20	ENSMZEG00005014406 #21	ybey (ENSMZEG00005014396) #22	usp37 (ENSMZEG00005014377)	cnot9 (ENSMZEG00005014365)	zgc:136439 (ENSMZEG00005014351)	asnsd1 (ENSMZEG00005014348)	slc40a1 (ENSMZEG00005014335)	wdr75 (ENSMZEG00005014322)	STAT4 (ENSMZEG00005014301)	ENSMZEG00005014277	ENSMZEG00005014227	fkbp7 (ENSMZEG00005014215)	osgepl1 (ENSMZEG00005014198)	alkbh6 (ENSMZEG00005014192)	adat3 (ENSMZEG00005014189)	SYMPK (ENSMZEG00005014146)	SLC35F5 (ENSMZEG00005014127)
Eastern happy	MODERN SPECIES	7	igfbp2b (ENSACLG00000003387)	igfbp5b (ENSACLG00000003379)	TNS1 (ENSACLG00000003009)	zgc:136333 (ENSACLG00000002973)	ENSACLG00000002949	bcs1l (ENSACLG00000002897)	ZNF142 (ENSACLG00000002891)	PLCD4 (ENSACLG00000002876)	ormdl1 (ENSACLG00000002790)	pms1 (ENSACLG00000002781)	mstnb (ENSACLG00000002763)	ENSACLG00000002757	hibch (ENSACLG00000002744)	lss (ENSACLG00000002587) #20	ENSACLG00000002461 #21	ybey (ENSACLG00000002438) #22	usp37 (ENSACLG00000002198)	cnot9 (ENSACLG00000002163)	zgc:136439 (ENSACLG00000002150)	asnsd1 (ENSACLG00000002117)	slc40a1 (ENSACLG00000002052)	wdr75 (ENSACLG00000002025)	STAT4 (ENSACLG00000001992)	ENSACLG00000001967	ENSACLG00000001961	ENSACLG00000001867	fkbp7 (ENSACLG00000001857)	osgepl1 (ENSACLG00000001841)	alkbh6 (ENSACLG00000001836)	adat3 (ENSACLG00000001830)	SYMPK (ENSACLG00000001813)
Midas cichlid	MODERN SPECIES	33						bcs1l (ENSACIG00000004834)	ZNF142 (ENSACIG00000004854)	PLCD4 (ENSACIG00000004893)	ormdl1 (ENSACIG00000004924)	pms1 (ENSACIG00000004933)	mstnb (ENSACIG00000005038)	ENSACIG00000005048	hibch (ENSACIG00000005054)	lss (ENSACIG00000005086) #20	ENSACIG00000005137 #21	ybey (ENSACIG00000005308) #22	usp37 (ENSACIG00000005323)	cnot9 (ENSACIG00000005487)	zgc:136439 (ENSACIG00000005506)	ENSACIG00000005548	ENSACIG00000005575	slc40a1 (ENSACIG00000005588)	wdr75 (ENSACIG00000005615)	STAT4 (ENSACIG00000005777)	ENSACIG00000005855	ENSACIG00000006253	ENSACIG00000006272	fkbp7 (ENSACIG00000006305)	ENSACIG00000006316	osgepl1 (ENSACIG00000006320)	alkbh6 (ENSACIG00000006337)
Pomacentridae	ANCESTRAL SPECIES	51	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155224.d	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Pomacentridae_A	ANCESTRAL SPECIES	52	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155224.d	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Amphiprion	ANCESTRAL SPECIES	52	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000182580	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155224.d	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273
Orange clownfish	MODERN SPECIES	3	wdr75 (ENSAPEG00000003696)	STAT4 (ENSAPEG00000003729)	ENSAPEG00000003821	ENSAPEG00000003850	fkbp7 (ENSAPEG00000003880)	osgepl1 (ENSAPEG00000003890)	alkbh6 (ENSAPEG00000003934)	ormdl1 (ENSAPEG00000003961)	adat3 (ENSAPEG00000003977)	pms1 (ENSAPEG00000003991)	mstnb (ENSAPEG00000004012)	ENSAPEG00000004029	hibch (ENSAPEG00000004045)	lss (ENSAPEG00000004092) #20	ENSAPEG00000004174 #21	ybey (ENSAPEG00000004197) #22	usp37 (ENSAPEG00000004235)	cnot9 (ENSAPEG00000004365)	PLCD4 (ENSAPEG00000004394)	ZNF142 (ENSAPEG00000004469)	bcs1l (ENSAPEG00000004528)	zgc:136333 (ENSAPEG00000004557)	TNS1 (ENSAPEG00000004583)	ENSAPEG00000004603	ENSAPEG00000004619	igfbp5b (ENSAPEG00000004632)	igfbp2b (ENSAPEG00000004641)	slc4a3 (ENSAPEG00000004673)	ENSAPEG00000004861	gulp1a (ENSAPEG00000004993)	ENSAPEG00000005066
Clown anemonefish	MODERN SPECIES	2268												ENSAOCG00000017191	hibch (ENSAOCG00000017204)	lss (ENSAOCG00000017280) #20	ENSAOCG00000017340 #21	ybey (ENSAOCG00000017346) #22	usp37 (ENSAOCG00000017372)	cnot9 (ENSAOCG00000017401)	PLCD4 (ENSAOCG00000017435)
Spiny chromis	MODERN SPECIES	2732															ENSAPOG00000016059 #21	ybey (ENSAPOG00000016069) #22	usp37 (ENSAPOG00000016082)	cnot9 (ENSAPOG00000016119)
Bicolor damselfish	MODERN SPECIES	1960												ENSSPAG00000015636	hibch (ENSSPAG00000015644)	lss (ENSSPAG00000015689) #20	ENSSPAG00000015778 #21	ybey (ENSSPAG00000015824) #22	usp37 (ENSSPAG00000015839)	cnot9 (ENSSPAG00000015881)	PLCD4 (ENSSPAG00000015928)	ZNF142 (ENSSPAG00000016019)
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Climbing perch	MODERN SPECIES	12	slc40a1 (ENSATEG00000008676)	wdr75 (ENSATEG00000008712)	ENSATEG00000008730	ENSATEG00000008815	ENSATEG00000008833	ENSATEG00000008852	osgepl1 (ENSATEG00000008881)	ENSATEG00000008859	adat3 (ENSATEG00000008909)	ormdl1 (ENSATEG00000008911)	pms1 (ENSATEG00000008961)	mstnb (ENSATEG00000008968)	ENSATEG00000008989	hibch (ENSATEG00000008995)	ENSATEG00000009009 #20	ENSATEG00000009098 #22	USP37 (ENSATEG00000009106)	CNOT9 (ENSATEG00000009188)	PLCD4 (ENSATEG00000009217)	ZNF142 (ENSATEG00000009234)	bcs1l (ENSATEG00000009249)	zgc:136333 (ENSATEG00000009256)	TNS1 (ENSATEG00000009288)	igfbp5b (ENSATEG00000009460)	igfbp2b (ENSATEG00000009467)	ENSATEG00000027372	slc4a3 (ENSATEG00000009496)	ENSATEG00000009545	gulp1a (ENSATEG00000009652)	ENSATEG00000009708	ENSATEG00000009722
Siamese fighting fish	MODERN SPECIES	11	efnb2a (ENSBSLG00000011599)	arglu1a (ENSBSLG00000011056)	ENSBSLG00000011038	ENSBSLG00000011023	ENSBSLG00000011010	osgepl1 (ENSBSLG00000010975)	adat3 (ENSBSLG00000010966)	ormdl1 (ENSBSLG00000010956)	pms1 (ENSBSLG00000010729)	mstnb (ENSBSLG00000010624)	ENSBSLG00000010463	ENSBSLG00000010461	hibch (ENSBSLG00000009802)	lss (ENSBSLG00000009140) #20	ENSBSLG00000008957 #21	ybey (ENSBSLG00000008603) #22	usp37 (ENSBSLG00000007926)	cnot9 (ENSBSLG00000007738)	PLCD4 (ENSBSLG00000006962)	maip1 (ENSBSLG00000006940)	maip1 (ENSBSLG00000006922)	maip1 (ENSBSLG00000006900)	tyw5 (ENSBSLG00000006858)	ENSBSLG00000006848	ENSBSLG00000006516	RAB17 (ENSBSLG00000006286)	MLPH (ENSBSLG00000005933)	ENSBSLG00000005925	COL6A3 (ENSBSLG00000005154)	cops8 (ENSBSLG00000004929)	ENSBSLG00000004877
Zig-zag eel	MODERN SPECIES	13	wdr75 (ENSMAMG00000010530)	ENSMAMG00000010541	ENSMAMG00000010625	ENSMAMG00000010685	ENSMAMG00000025028	osgepl1 (ENSMAMG00000010694)	ENSMAMG00000010698	adat3 (ENSMAMG00000010706)	ormdl1 (ENSMAMG00000010710)	pms1 (ENSMAMG00000010717)	mstnb (ENSMAMG00000010725)	ENSMAMG00000010733	hibch (ENSMAMG00000010741)	LSS (ENSMAMG00000010753) #20	ENSMAMG00000010786 #21	YBEY (ENSMAMG00000010832) #22	USP37 (ENSMAMG00000010862)	CNOT9 (ENSMAMG00000011021)	PLCD4 (ENSMAMG00000011046)	ZNF142 (ENSMAMG00000011171)	bcs1l (ENSMAMG00000011182)	zgc:136333 (ENSMAMG00000011191)	TNS1 (ENSMAMG00000011244)	igfbp5b (ENSMAMG00000011353)	igfbp2b (ENSMAMG00000024703)	slc4a3 (ENSMAMG00000011375)	COL5A2 (ENSMAMG00000011468)	gulp1a (ENSMAMG00000011545)	ENSMAMG00000026701	ENSMAMG00000028000	FAM171B (ENSMAMG00000011601)
Carangaria	ANCESTRAL SPECIES	12	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Seriola	ANCESTRAL SPECIES	34	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Yellowtail amberjack	MODERN SPECIES	3051	wdr75 (ENSSLDG00000014912)	ENSSLDG00000014983	ENSSLDG00000015021	ENSSLDG00000015084	fkbp7 (ENSSLDG00000015200)	osgepl1 (ENSSLDG00000015220)	alkbh6 (ENSSLDG00000015256)	adat3 (ENSSLDG00000015266)	ormdl1 (ENSSLDG00000015274)	pms1 (ENSSLDG00000015291)	mstnb (ENSSLDG00000015315)	ENSSLDG00000015326	hibch (ENSSLDG00000015336)	lss (ENSSLDG00000015382) #20	MCM3AP (ENSSLDG00000016147) #21	ybey (ENSSLDG00000019474) #22	usp37 (ENSSLDG00000019488)	cnot9 (ENSSLDG00000019516)	PLCD4 (ENSSLDG00000019540)	ZNF142 (ENSSLDG00000019564)	bcs1l (ENSSLDG00000019606)	zgc:136333 (ENSSLDG00000019620)	TNS1 (ENSSLDG00000019664)	ENSSLDG00000019911	igfbp5b (ENSSLDG00000019917)	igfbp2b (ENSSLDG00000019928)	slc4a3 (ENSSLDG00000019942)	ENSSLDG00000019989	gulp1a (ENSSLDG00000020054)	ENSSLDG00000020075	ENSSLDG00000020088
Greater amberjack	MODERN SPECIES	21	STAT4 (ENSSDUG00000007242)	ENSSDUG00000007293	ENSSDUG00000007339	ENSSDUG00000007349	fkbp7 (ENSSDUG00000007385)	osgepl1 (ENSSDUG00000007391)	alkbh6 (ENSSDUG00000007406)	adat3 (ENSSDUG00000007414)	ormdl1 (ENSSDUG00000007421)	pms1 (ENSSDUG00000007435)	mstnb (ENSSDUG00000007459)	ENSSDUG00000007475	hibch (ENSSDUG00000007481)	lss (ENSSDUG00000007508) #20	MCM3AP (ENSSDUG00000007571) #21	ybey (ENSSDUG00000007610) #22	usp37 (ENSSDUG00000007623)	cnot9 (ENSSDUG00000007667)	PLCD4 (ENSSDUG00000007711)	ZNF142 (ENSSDUG00000007730)	bcs1l (ENSSDUG00000007742)	zgc:136333 (ENSSDUG00000007765)	TNS1 (ENSSDUG00000007852)	igfbp5b (ENSSDUG00000007969)	igfbp2b (ENSSDUG00000007987)	ENSSDUG00000007994	slc4a3 (ENSSDUG00000008026)	COL5A2 (ENSSDUG00000008163)	gulp1a (ENSSDUG00000008263)	ENSSDUG00000008428	ENSSDUG00000008445
Barramundi perch	MODERN SPECIES	216	ENSLCAG00010001425	ENSLCAG00010001417	ENSLCAG00010001401	ENSLCAG00010000783	ENSLCAG00010000380	osgepl1 (ENSLCAG00010000367)	alkbh6 (ENSLCAG00010000357)	adat3 (ENSLCAG00010000350)	ormdl1 (ENSLCAG00010000333)	pms1 (ENSLCAG00010000283)	mstnb (ENSLCAG00010022821)	ENSLCAG00010022812	hibch (ENSLCAG00010022801)	lss (ENSLCAG00010022762) #20	ENSLCAG00010022745 #21	ybey (ENSLCAG00010022743) #22	usp37 (ENSLCAG00010022741)	cnot9 (ENSLCAG00010022735)	PLCD4 (ENSLCAG00010022517)	ENSLCAG00010022468	ENSLCAG00010022467	bcs1l (ENSLCAG00010022465)	zgc:136333 (ENSLCAG00010022461)	TNS1 (ENSLCAG00010022355)	igfbp5b (ENSLCAG00010022316)	igfbp2b (ENSLCAG00010022310)	ENSLCAG00010022307	slc4a3 (ENSLCAG00010022227)
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765.l	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805
Tongue sole	MODERN SPECIES	7	ENSCSEG00000016628	ENSCSEG00000016624	ENSCSEG00000016444	fkbp7 (ENSCSEG00000016425)	ENSCSEG00000016419	osgepl1 (ENSCSEG00000016416)	alkbh6 (ENSCSEG00000016413)	adat3 (ENSCSEG00000016408)	ormdl1 (ENSCSEG00000016404)	ENSCSEG00000016396	ENSCSEG00000016375	ENSCSEG00000016370	hibch (ENSCSEG00000016344)	lss (ENSCSEG00000016324) #20	ENSCSEG00000016295 #21	ybey (ENSCSEG00000016288) #22	usp37 (ENSCSEG00000016207)	cnot9 (ENSCSEG00000016169)	PLCD4 (ENSCSEG00000016126)	ENSCSEG00000016104	ENSCSEG00000016097	ENSCSEG00000016080	ENSCSEG00000016040	ENSCSEG00000016032	itgav (ENSCSEG00000016012)	ENSCSEG00000016007	MYLK (ENSCSEG00000015990)	ENSCSEG00000015955	ENSCSEG00000015947	ENSCSEG00000015911	ENSCSEG00000015805
Turbot	MODERN SPECIES	5	ENSSMAG00000016955	ENSSMAG00000022580	ENSSMAG00000030365	ENSSMAG00000016431	ENSSMAG00000016384	osgepl1 (ENSSMAG00000016314)	ENSSMAG00000016306	adat3 (ENSSMAG00000016304)	ormdl1 (ENSSMAG00000016290)	pms1 (ENSSMAG00000016259)	mstnb (ENSSMAG00000016251)	ENSSMAG00000016238	hibch (ENSSMAG00000016217)	LSS (ENSSMAG00000017301) #20	ENSSMAG00000017233 #21	YBEY (ENSSMAG00000017209) #22	USP37 (ENSSMAG00000017077)	CNOT9 (ENSSMAG00000017049)	PLCD4 (ENSSMAG00000017007)	ZNF142 (ENSSMAG00000016984)	bcs1l (ENSSMAG00000016978)	zgc:136333 (ENSSMAG00000016968)	TNS1 (ENSSMAG00000002630)	igfbp5b (ENSSMAG00000022148)	igfbp2b (ENSSMAG00000002850)	slc4a3 (ENSSMAG00000002874)	ENSSMAG00000002910	gulp1a (ENSSMAG00000002959)	ENSSMAG00000003038	ENSSMAG00000034020	ENSSMAG00000003063
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000166446	ENSGT00940000160782	ENSGT00940000154443.f	ENSGT00390000005923	ENSGT00940000155558	ENSGT00940000165507	ENSGT00940000156472.d	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00390000006601	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00390000012547.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00940000157043	ENSGT00390000013151.a.a.b	ENSGT00940000163322.b	ENSGT00940000163322.a.b.a.b	ENSGT00940000163148.a.b.b.a.a.a	ENSGT00940000163148.a.b.b.a.b.b.b.a	ENSGT00940000163148.a.b.b.a.b.a.c.a.b.e.a.a	ENSGT00940000163148.a.b.b.a.b.a.c.a.b.f	ENSGT00940000163148.a.b.b.a.b.a.c.a.b.e.a.b	ENSGT00940000163148.a.a.b	ENSGT00940000163148.a.b.b.a.a.b	ENSGT00940000163322.a.a.a	ENSGT00940000163494.a.a.c.a.c	ENSGT00940000156768
Fugu	MODERN SPECIES		ENSTRUG00000031114	nyx (ENSTRUG00000013984)	ddx3xa (ENSTRUG00000014001)	nup35 (ENSTRUG00000014111)	dnajc10 (ENSTRUG00000014113)	frzb (ENSTRUG00000014200)	dusp19a (ENSTRUG00000014275)	ccdc80 (ENSTRUG00000014296)	slc35a5 (ENSTRUG00000014370)	f5 (ENSTRUG00000014416)	vwa8 (ENSTRUG00000006143)	ENSTRUG00000021217	ENSTRUG00000021409	idh1 (ENSTRUG00000005863)	ENSTRUG00000005210 #21	ybey (ENSTRUG00000030235) #22	usp37 (ENSTRUG00000004918)	ENSTRUG00000004307	ENSTRUG00000027764	arl4cb (ENSTRUG00000003085)	ENSTRUG00000031348	sh3bp4 (ENSTRUG00000000489)	ENSTRUG00000032703	si:dkey-57a22.15 (ENSTRUG00000027681)	zgc:153846 (ENSTRUG00000000230)	ENSTRUG00000030660	ENSTRUG00000023922	ENSTRUG00000022219	ENSTRUG00000016089	ENSTRUG00000021795	crygm3 (ENSTRUG00000022382)
Tetraodon	MODERN SPECIES	13	nyx (ENSTNIG00000011570)	ddx3xa (ENSTNIG00000011569)	nup35 (ENSTNIG00000011568)	ENSTNIG00000001467	ENSTNIG00000011567	frzb (ENSTNIG00000011566)	dusp19a (ENSTNIG00000011565)	ccdc80 (ENSTNIG00000011564)	slc35a5 (ENSTNIG00000011563)	f5 (ENSTNIG00000011562)	vwa8 (ENSTNIG00000011561)	ENSTNIG00000011560	ENSTNIG00000011559	idh1 (ENSTNIG00000011558)	ENSTNIG00000011557 #21	ybey (ENSTNIG00000001620) #22	usp37 (ENSTNIG00000011556)	sh3bp4 (ENSTNIG00000011555)	ENSTNIG00000011554	si:dkey-57a22.15 (ENSTNIG00000011553)	zgc:153846 (ENSTNIG00000011552)	ENSTNIG00000011551	ENSTNIG00000011550	ENSTNIG00000011549	ENSTNIG00000011548	ENSTNIG00000011547	ENSTNIG00000011546	crygm3 (ENSTNIG00000011545)	ENSTNIG00000011544	crygs3 (ENSTNIG00000011543)	DGKG (ENSTNIG00000011542)
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00710000108330	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Ballan wrasse	MODERN SPECIES	55	STAT4 (ENSLBEG00000028006)	ENSLBEG00000028019	lss (ENSLBEG00000028041) #20	hibch (ENSLBEG00000028083)	ENSLBEG00000028129	mstnb (ENSLBEG00000028147)	pms1 (ENSLBEG00000028137)	ormdl1 (ENSLBEG00000028157)	adat3 (ENSLBEG00000028168)	alkbh6 (ENSLBEG00000028172)	osgepl1 (ENSLBEG00000028176)	fkbp7 (ENSLBEG00000028184)	ENSLBEG00000028193	ENSLBEG00000000255	MCM3AP (ENSLBEG00000000276) #21	ybey (ENSLBEG00000000362) #22	usp37 (ENSLBEG00000000389)	cnot9 (ENSLBEG00000000729)	PLCD4 (ENSLBEG00000000786)	ZNF142 (ENSLBEG00000000807)	bcs1l (ENSLBEG00000000875)	zgc:136333 (ENSLBEG00000000917)
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00940000177805
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
European seabass	MODERN SPECIES	5	ENSDLAG00005021526	ENSDLAG00005021562	ENSDLAG00005022435	osgepl1 (ENSDLAG00005022441)	adat3 (ENSDLAG00005022449)	ENSDLAG00005022445	ormdl1 (ENSDLAG00005027751)	pms1 (ENSDLAG00005022460)	mstnb (ENSDLAG00005022521)	ENSDLAG00005022536	hibch (ENSDLAG00005022541)	LSS (ENSDLAG00005022621) #20	ENSDLAG00005022735	ENSDLAG00005022739	ENSDLAG00005022744 #21	YBEY (ENSDLAG00005034841) #22	USP37 (ENSDLAG00005022800)	CNOT9 (ENSDLAG00005022857)	PLCD4 (ENSDLAG00005022885)	ZNF142 (ENSDLAG00005023256)	zgc:136333 (ENSDLAG00005023265)	TNS1 (ENSDLAG00005023305)	igfbp5b (ENSDLAG00005024114)	igfbp2b (ENSDLAG00005024118)	slc4a3 (ENSDLAG00005024195)	ENSDLAG00005024788	gulp1a (ENSDLAG00005004339)	ENSDLAG00005033365	ENSDLAG00005004586	ENSDLAG00005005708	lrrc3 (ENSDLAG00005031007)
Large yellow croaker	MODERN SPECIES		LCT (ENSLCRG00005014723)	ENSLCRG00005014721	ENSLCRG00005014720	hdac4 (ENSLCRG00005013772)	twist2 (ENSLCRG00005013760)	ENSLCRG00005013759	asb1 (ENSLCRG00005013758)	traf3ip1 (ENSLCRG00005013756)	ADARB1 (ENSLCRG00005013696) #12	ENSLCRG00005013693	ENSLCRG00005013688	ENSLCRG00005013687	zgc:162396 (ENSLCRG00005013685)	zgc:162780 (ENSLCRG00005013684)	ENSLCRG00005013683 #21	ybey (ENSLCRG00005013682) #22	usp37 (ENSLCRG00005013676)	cnot9 (ENSLCRG00005013674)	PLCD4 (ENSLCRG00005013664)	ZNF142 (ENSLCRG00005013660)	bcs1l (ENSLCRG00005013659)	CYP27A1 (ENSLCRG00005013658)	TNS1 (ENSLCRG00005012097)	igfbp5b (ENSLCRG00005012082)	igfbp2b (ENSLCRG00005012081)	slc4a3 (ENSLCRG00005009948)	COL5A2 (ENSLCRG00005007993)	gulp1a (ENSLCRG00005007966)	ENSLCRG00005007962	ENSLCRG00005007405	ENSLCRG00005007392
Gilthead seabream	MODERN SPECIES	23	wdr75 (ENSSAUG00010009177)	ENSSAUG00010009157	ENSSAUG00010009144	ENSSAUG00010004954	fkbp7 (ENSSAUG00010004880)	osgepl1 (ENSSAUG00010004873)	alkbh6 (ENSSAUG00010004870)	adat3 (ENSSAUG00010004867)	ormdl1 (ENSSAUG00010004864)	pms1 (ENSSAUG00010004800)	mstnb (ENSSAUG00010004791)	ENSSAUG00010004790	hibch (ENSSAUG00010004770)	lss (ENSSAUG00010004683) #20	ENSSAUG00010004668 #21	ybey (ENSSAUG00010004664) #22	usp37 (ENSSAUG00010004648)	cnot9 (ENSSAUG00010004638)	PLCD4 (ENSSAUG00010004216)	ZNF142 (ENSSAUG00010004108)	bcs1l (ENSSAUG00010004068)	zgc:136333 (ENSSAUG00010015642)	TNS1 (ENSSAUG00010015615)	igfbp5b (ENSSAUG00010015605)	igfbp2b (ENSSAUG00010015599)	slc4a3 (ENSSAUG00010015089)	COL5A2 (ENSSAUG00010014375)	gulp1a (ENSSAUG00010014239)	ENSSAUG00010014232	ENSSAUG00010014112	ENSSAUG00010014107
Perciformes	ANCESTRAL SPECIES	23	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b	ENSGT00950000183184.a.a.a
Pike perch	MODERN SPECIES	191	COL6A3 (ENSSLUG00000019755)	cops8 (ENSSLUG00000019749)	ENSSLUG00000019736	ENSSLUG00000018646	fkbp7 (ENSSLUG00000018593)	osgepl1 (ENSSLUG00000018585)	alkbh6 (ENSSLUG00000018581)	adat3 (ENSSLUG00000018579)	ormdl1 (ENSSLUG00000018570)	pms1 (ENSSLUG00000018218)	mstnb (ENSSLUG00000018180)	ENSSLUG00000018175	hibch (ENSSLUG00000017666)	lss (ENSSLUG00000016140) #20	ENSSLUG00000015955 #21	ybey (ENSSLUG00000015934) #22	usp37 (ENSSLUG00000015895)	cnot9 (ENSSLUG00000015860)	PLCD4 (ENSSLUG00000015812)	ENSSLUG00000015766	ENSSLUG00000015731
Channel bull blenny	MODERN SPECIES	13	wdr75 (ENSCGOG00000021264)	ENSCGOG00000021451	ENSCGOG00000021571	ENSCGOG00000021597	fkbp7 (ENSCGOG00000021818)	osgepl1 (ENSCGOG00000021820)	alkbh6 (ENSCGOG00000021822)	pms1 (ENSCGOG00000021826)	adat3 (ENSCGOG00000021904)	ormdl1 (ENSCGOG00000021905)	mstnb (ENSCGOG00000021916)	ENSCGOG00000021934	hibch (ENSCGOG00000021938)	lss (ENSCGOG00000021990) #20	ENSCGOG00000022398 #21	ybey (ENSCGOG00000022413) #22	usp37 (ENSCGOG00000022416)	cnot9 (ENSCGOG00000022431)	PLCD4 (ENSCGOG00000022467)	ZNF142 (ENSCGOG00000023002)	bcs1l (ENSCGOG00000023004)	zgc:136333 (ENSCGOG00000023008)	TNS1 (ENSCGOG00000023029)	igfbp5b (ENSCGOG00000023194)	igfbp2b (ENSCGOG00000023204)	slc4a3 (ENSCGOG00000023208)	COL5A2 (ENSCGOG00000023213)	gulp1a (ENSCGOG00000023238)	ENSCGOG00000023244	ENSCGOG00000023247	ENSCGOG00000023279
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00390000015143	ENSGT00390000006303	ENSGT01050000244905.D	ENSGT00390000010463.a.b.c.b	ENSGT00940000159964	ENSGT00940000153744.A	ENSGT00510000048626	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.h	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000155400.B	ENSGT00940000155890.a.a	ENSGT00940000158542.b	ENSGT00940000159765	ENSGT00940000155675.p.a	ENSGT00940000156186.l.b	ENSGT00940000165273	ENSGT00940000165235.b
Lumpfish	MODERN SPECIES	13	ENSCLMG00005009986	ENSCLMG00005009985	ENSCLMG00005009983	ENSCLMG00005009982	SYMPK (ENSCLMG00005004930)	SLC35F5 (ENSCLMG00005004215)	ENSCLMG00005004213	gpr39 (ENSCLMG00005004212)	LYPD1 (ENSCLMG00005004211)	ftcdnl1 (ENSCLMG00005019254) ##18	ENSCLMG00005019253	ENSCLMG00005019250	tfg (ENSCLMG00005019249)	jagn1a (ENSCLMG00005019248)	ENSCLMG00005019247 #21	ybey (ENSCLMG00005019246) #22	usp37 (ENSCLMG00005019240)	CNOT9 (ENSCLMG00005019237)	PLCD4 (ENSCLMG00005018795)	ZNF142 (ENSCLMG00005018790)	bcs1l (ENSCLMG00005018789)	zgc:136333 (ENSCLMG00005018672)	igfbp5b (ENSCLMG00005018668)	ENSCLMG00005018667	slc4a3 (ENSCLMG00005018665)	COL5A2 (ENSCLMG00005018662)	gulp1a (ENSCLMG00005018660)	ENSCLMG00005018659	ENSCLMG00005017855	hspe1 (ENSCLMG00005017849)	hspd1 (ENSCLMG00005017848)
Stickleback	MODERN SPECIES	16	ENSGACG00000002701	STAT4 (ENSGACG00000002684)	ENSGACG00000002673	ENSGACG00000002657	fkbp7 (ENSGACG00000002654)	osgepl1 (ENSGACG00000002648)	alkbh6 (ENSGACG00000002647)	adat3 (ENSGACG00000002645)	ormdl1 (ENSGACG00000002642)	pms1 (ENSGACG00000002634)	mstnb (ENSGACG00000002630)	ENSGACG00000002627	hibch (ENSGACG00000002609)	lss (ENSGACG00000002592) #20	ENSGACG00000002570 #21	ybey (ENSGACG00000002567) #22	usp37 (ENSGACG00000002557)	cnot9 (ENSGACG00000002543)	PLCD4 (ENSGACG00000002540)	ZNF142 (ENSGACG00000002534)	zgc:136333 (ENSGACG00000002514)	TNS1 (ENSGACG00000002511)	igfbp5b (ENSGACG00000002508)	igfbp2b (ENSGACG00000002506)	slc4a3 (ENSGACG00000002501)	COL5A2 (ENSGACG00000002409)	gulp1a (ENSGACG00000002401)	ENSGACG00000002393	ENSGACG00000002387	gjc4b (ENSGACG00000002384)	CXCR2 (ENSGACG00000002380)
Tiger tail seahorse	MODERN SPECIES	208	tyw5 (ENSHCOG00000010478)	maip1 (ENSHCOG00000010452)	STAT4 (ENSHCOG00000010429)	ENSHCOG00000009987	ENSHCOG00000009979	fkbp7 (ENSHCOG00000009934)	osgepl1 (ENSHCOG00000009927)	alkbh6 (ENSHCOG00000000308)	adat3 (ENSHCOG00000000306)	ormdl1 (ENSHCOG00000009887)	pms1 (ENSHCOG00000009870)	mstnb (ENSHCOG00000009683)	ENSHCOG00000006942	hibch (ENSHCOG00000006925)	lss (ENSHCOG00000006843) #20	ybey (ENSHCOG00000006749) #22	usp37 (ENSHCOG00000006728)	cnot9 (ENSHCOG00000006646)	PLCD4 (ENSHCOG00000006629)	ZNF142 (ENSHCOG00000006596)	ENSHCOG00000006583	bcs1l (ENSHCOG00000006571)	zgc:136333 (ENSHCOG00000006560)	ENSHCOG00000006522	ENSHCOG00000006503	slc39a10 (ENSHCOG00000006465)	tmeff2a (ENSHCOG00000006398)	cavin2a (ENSHCOG00000006383)	nabp1a (ENSHCOG00000006374)	ENSHCOG00000006365	ENSHCOG00000006343
Pinecone sodierfish	MODERN SPECIES	13	slc40a1 (ENSMMDG00005020620)	ENSMMDG00005020629	asnsd1 (ENSMMDG00005020624)	zgc:136439 (ENSMMDG00005020632)	SYMPK (ENSMMDG00005020669)	osgepl1 (ENSMMDG00005021222)	adat3 (ENSMMDG00005021224)	alkbh6 (ENSMMDG00005021227)	ormdl1 (ENSMMDG00005021231)	pms1 (ENSMMDG00005021239)	mstnb (ENSMMDG00005021255)	ENSMMDG00005021258	hibch (ENSMMDG00005021269)	lss (ENSMMDG00005021518) #20	ENSMMDG00005021757 #21	ybey (ENSMMDG00005021764) #22	usp37 (ENSMMDG00005021787)	cnot9 (ENSMMDG00005021915)	PLCD4 (ENSMMDG00005021923)	ZNF142 (ENSMMDG00005021928)	bcs1l (ENSMMDG00005021930)	zgc:136333 (ENSMMDG00005013527)	TNS1 (ENSMMDG00005013571)	igfbp5b (ENSMMDG00005013723)	igfbp2b (ENSMMDG00005013726)	ENSMMDG00005013730	slc4a3 (ENSMMDG00005013733)	COL5A2 (ENSMMDG00005013736)	gulp1a (ENSMMDG00005013737)	ENSMMDG00005013741	ENSMMDG00005013745
Cod	MODERN SPECIES	12	ENSGMOG00000002357	ENSGMOG00000024554	osgepl1 (ENSGMOG00000012648)	ENSGMOG00000020607	adat3 (ENSGMOG00000028591)	ormdl1 (ENSGMOG00000012643)	pms1 (ENSGMOG00000012641)	mstnb (ENSGMOG00000012639)	ENSGMOG00000027801	hibch (ENSGMOG00000012636)	LSS (ENSGMOG00000012634) #20	ENSGMOG00000023210	LSS (ENSGMOG00000027003) #20	ENSGMOG00000012627 #21	ENSGMOG00000033121	YBEY (ENSGMOG00000012625) #22	USP37 (ENSGMOG00000012619)	CNOT9 (ENSGMOG00000012616)	PLCD4 (ENSGMOG00000012615)	ZNF142 (ENSGMOG00000029104)	bcs1l (ENSGMOG00000012601)	zgc:136333 (ENSGMOG00000012598)	TNS1 (ENSGMOG00000032397)	igfbp5b (ENSGMOG00000019318)	igfbp2b (ENSGMOG00000002992)	slc4a3 (ENSGMOG00000019300)	ENSGMOG00000019277	gulp1a (ENSGMOG00000019273)	ENSGMOG00000019130	ENSGMOG00000019119	ENSGMOG00000008599
Protacanthopterygii	ANCESTRAL SPECIES	64	ENSGT00390000006303	ENSGT00390000015143	ENSGT01020000230587	ENSGT00390000012446	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085.i	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091	ENSGT00390000001225.s.a	ENSGT00940000156180.f	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000167133	ENSGT00940000160544.f.a	ENSGT01090000259987.a.a.a.p #10	ENSGT00940000155992.c.a #12	ENSGT00530000063273.b.a.a	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000166532
Salmoninae	ANCESTRAL SPECIES	221	ENSGT00390000015143.k	ENSGT01020000230587	ENSGT00390000012446.c	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00950000183178.b.a.f.a.a	ENSGT00390000010706.d	ENSGT00950000183178.b.a.f.b	ENSGT00940000157085.i.a	ENSGT00940000165813.b.e	ENSGT00940000167830.c	ENSGT00890000139491.n	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.f.b	ENSGT00390000001225.s.a	ENSGT00940000156180.f.h	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.j	ENSGT00940000167133	ENSGT00940000160544.f.a	ENSGT01090000259987.a.a.a.p.b #10	ENSGT00940000155992.c.a.c #12	ENSGT00530000063273.b.a.a.g	ENSGT00720000108822.c	ENSGT00940000153969.b	ENSGT00940000165503.j	ENSGT00940000166532.g
Huchen	MODERN SPECIES	234	slc40a1 (ENSHHUG00000032948)	ENSHHUG00000032970	asnsd1 (ENSHHUG00000032968)	zgc:136439 (ENSHHUG00000032971)	ankar (ENSHHUG00000032980)	osgepl1 (ENSHHUG00000033040)	adat3 (ENSHHUG00000033054)	ormdl1 (ENSHHUG00000033064)	pms1 (ENSHHUG00000033079)	mstnb (ENSHHUG00000033085)	ENSHHUG00000033186	ENSHHUG00000033190	lss (ENSHHUG00000033192) #20	MCM3AP (ENSHHUG00000033212) #21	ENSHHUG00000033234	ybey (ENSHHUG00000033242) #22	usp37 (ENSHHUG00000033257)	cnot9 (ENSHHUG00000033364)	PLCD4 (ENSHHUG00000033380)	ZNF142 (ENSHHUG00000034175)	bcs1l (ENSHHUG00000034182)	ENSHHUG00000034195	zgc:66484 (ENSHHUG00000034208)	VIL1 (ENSHHUG00000034211)	ITGB2 (ENSHHUG00000034340) #10
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00390000015143.k	ENSGT01020000230587	ENSGT00390000012446.c	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00950000183178.b.a.f.a.a	ENSGT00390000010706.d	ENSGT00950000183178.b.a.f.b	ENSGT00940000157085.i.a	ENSGT00940000165813.b.e	ENSGT00940000167830.c	ENSGT00890000139491.n	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.f.b	ENSGT00390000001225.s.a	ENSGT00940000156180.f.h	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.j	ENSGT00940000167133	ENSGT00940000160544.f.a	ENSGT01090000259987.a.a.a.p.b #10	ENSGT00940000155992.c.a.c #12	ENSGT00530000063273.b.a.a.g	ENSGT00720000108822.c	ENSGT00940000153969.b	ENSGT00940000165503.j	ENSGT00940000166532.g
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT01010000229060	ENSGT00390000006303.j	ENSGT00390000015143.k	ENSGT01020000230587	ENSGT00390000012446.c	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A.h	ENSGT00950000183178.b.a.f.b	ENSGT00940000157085.i.a	ENSGT00940000165813.b.e	ENSGT00940000167830.c	ENSGT00890000139491.n	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.f.b	ENSGT00390000001225.s.a	ENSGT00940000156180.f.h	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.j	ENSGT00940000167133.e	ENSGT00940000160544.f.a	ENSGT01090000259987.a.a.a.p.b #10	ENSGT00940000155992.c.a.c #12	ENSGT00530000063273.b.a.a.g	ENSGT00720000108822.c	ENSGT00940000153969.b	ENSGT00940000165503.j	ENSGT00940000166532.g
Rainbow trout	MODERN SPECIES	14	ENSOMYG00000049395	asnsd1 (ENSOMYG00000013314)	zgc:136439 (ENSOMYG00000013326)	ankar (ENSOMYG00000013340)	osgepl1 (ENSOMYG00000013364)	ENSOMYG00000072719	ENSOMYG00000013382	ormdl1 (ENSOMYG00000013398)	pms1 (ENSOMYG00000013452)	ENSOMYG00000059309	ENSOMYG00000077870	mstnb (ENSOMYG00000013485)	ENSOMYG00000055667	LSS (ENSOMYG00000013613) #20	ENSOMYG00000013755 #21	YBEY (ENSOMYG00000013844) #22	USP37 (ENSOMYG00000013941)	CNOT9 (ENSOMYG00000014285)	PLCD4 (ENSOMYG00000014350)	ZNF142 (ENSOMYG00000014477)	bcs1l (ENSOMYG00000014485)	ENSOMYG00000014513	ENSOMYG00000068674	ENSOMYG00000014681	ENSOMYG00000016079 #10	ENSOMYG00000016214	ENSOMYG00000016259 #12	agr1 (ENSOMYG00000016488)	traf3ip1 (ENSOMYG00000016497)	ENSOMYG00000065849	asb1 (ENSOMYG00000016548)
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT01010000229060	ENSGT00390000006303.j.a	ENSGT00390000015143.k	ENSGT01020000230587	ENSGT00390000012446.c	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A.h	ENSGT00950000183178.b.a.f.b	ENSGT00940000157085.i.a	ENSGT00940000165813.b.e	ENSGT00940000167830.c	ENSGT00890000139491.n	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.f.b	ENSGT00390000001225.s.a	ENSGT00940000156180.f.h	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.j	ENSGT00940000167133.e	ENSGT00940000160544.f.a	ENSGT01090000259987.a.a.a.p.b #10	ENSGT00940000155992.c.a.c #12	ENSGT00530000063273.b.a.a.g	ENSGT00720000108822.c	ENSGT00940000153969.b	ENSGT00940000165503.j	ENSGT00940000166532.g
Coho salmon	MODERN SPECIES	18	ENSOKIG00005018631	ENSOKIG00005018494	wdr75 (ENSOKIG00005018103)	slc40a1 (ENSOKIG00005018049)	ENSOKIG00005018024	asnsd1 (ENSOKIG00005018043)	zgc:136439 (ENSOKIG00005018011)	ankar (ENSOKIG00005017969)	osgepl1 (ENSOKIG00005017920)	ormdl1 (ENSOKIG00005017849)	pms1 (ENSOKIG00005017740)	mstnb (ENSOKIG00005017681)	ENSOKIG00005017674	lss (ENSOKIG00005017548) #20	MCM3AP (ENSOKIG00005017233) #21	ybey (ENSOKIG00005017203) #22	usp37 (ENSOKIG00005017071)	CNOT9 (ENSOKIG00005017002)	PLCD4 (ENSOKIG00005016886)	ZNF142 (ENSOKIG00005016864)	bcs1l (ENSOKIG00005016854)	CYP27A1 (ENSOKIG00005016838)	zgc:66484 (ENSOKIG00005016818)	vil1 (ENSOKIG00005016604)	ITGB2 (ENSOKIG00005015663) #10	ADARB1 (ENSOKIG00005015504) #12	agr1 (ENSOKIG00005015486)	traf3ip1 (ENSOKIG00005015449)	asb1 (ENSOKIG00005015436)	ENSOKIG00005015426	twist2 (ENSOKIG00005015419)
Chinook salmon	MODERN SPECIES	18	akt2l (ENSOTSG00005036386)	wdr75 (ENSOTSG00005036118)	slc40a1 (ENSOTSG00005036106)	asnsd1 (ENSOTSG00005036105)	zgc:136439 (ENSOTSG00005036102)	ankar (ENSOTSG00005036100)	osgepl1 (ENSOTSG00005036095)	ENSOTSG00005036091	ormdl1 (ENSOTSG00005036090)	pms1 (ENSOTSG00005036089)	ENSOTSG00005036088	mstnb (ENSOTSG00005036082)	hibch (ENSOTSG00005036080)	lss (ENSOTSG00005033926) #20	MCM3AP (ENSOTSG00005033913) #21	ybey (ENSOTSG00005033911) #22	usp37 (ENSOTSG00005033524)	cnot9 (ENSOTSG00005033522)	PLCD4 (ENSOTSG00005033521)	ZNF142 (ENSOTSG00005033520)	bcs1l (ENSOTSG00005033519)	CYP27A1 (ENSOTSG00005033518)	zgc:66484 (ENSOTSG00005033517)	vil1 (ENSOTSG00005033430)	ITGB2 (ENSOTSG00005024955) #10	ADARB1 (ENSOTSG00005024907) #12	agr1 (ENSOTSG00005024905)	traf3ip1 (ENSOTSG00005024903)	asb1 (ENSOTSG00005024901)	ENSOTSG00005024900	twist2 (ENSOTSG00005024899)
Salmo	ANCESTRAL SPECIES	10	ENSGT00390000006303.j	ENSGT00390000015143.k	ENSGT00390000012446.c	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00950000183178.b.a.f.a.a	ENSGT00390000010706.d	ENSGT00950000183178.b.a.f.b	ENSGT00940000157085.i.a	ENSGT00940000165813.b.e	ENSGT00940000167830.c	ENSGT00890000139491.n	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000158091.f.b	ENSGT00390000001225.s.a	ENSGT00940000156180.f.h	ENSGT00940000163074	ENSGT00390000005415	ENSGT00950000182905.a.a.a.a.b.j	ENSGT00940000160544.f.a	ENSGT01090000259987.a.a.a.p.b #10	ENSGT00940000155992.c.a.c #12	ENSGT00530000063273.b.a.a.g	ENSGT00720000108822.c	ENSGT00940000153969.b	ENSGT00940000165503.j	ENSGT00940000166532.g	ENSGT00940000157440.m.a.c
River trout	MODERN SPECIES	12	ENSSTUG00000014663	ENSSTUG00000014675	ENSSTUG00000014690	slc40a1 (ENSSTUG00000014698)	asnsd1 (ENSSTUG00000014713)	zgc:136439 (ENSSTUG00000014726)	ankar (ENSSTUG00000014736)	osgepl1 (ENSSTUG00000014780)	ormdl1 (ENSSTUG00000014859)	pms1 (ENSSTUG00000014898)	mstnb (ENSSTUG00000015112)	ENSSTUG00000015137	hibch (ENSSTUG00000015144)	lss (ENSSTUG00000015271) #20	MCM3AP (ENSSTUG00000015687) #21	ybey (ENSSTUG00000015835) #22	usp37 (ENSSTUG00000015852)	cnot9 (ENSSTUG00000016141)	PLCD4 (ENSSTUG00000016165)	ZNF142 (ENSSTUG00000016305)	bcs1l (ENSSTUG00000016310)	ENSSTUG00000016332	vil1 (ENSSTUG00000016422)	ITGB2 (ENSSTUG00000018110) #10	ENSSTUG00000021455	ADARB1 (ENSSTUG00000021460) #12	agr1 (ENSSTUG00000021502)	traf3ip1 (ENSSTUG00000021506)	asb1 (ENSSTUG00000021531)	ENSSTUG00000021538	twist2 (ENSSTUG00000021540)
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000052788	ENSSSAG00000110667	ENSSSAG00000091717	slc40a1 (ENSSSAG00000050163)	wdr75 (ENSSSAG00000050305)	zgc:136439 (ENSSSAG00000092441)	ankar (ENSSSAG00000049948)	osgepl1 (ENSSSAG00000049909)	adat3 (ENSSSAG00000049890)	ormdl1 (ENSSSAG00000049881)	pms1 (ENSSSAG00000049399)	mstnb (ENSSSAG00000049265)	ENSSSAG00000091097	LSS (ENSSSAG00000045554) #20	ENSSSAG00000121613 #21	YBEY (ENSSSAG00000045469) #22	USP37 (ENSSSAG00000044673)	CNOT9 (ENSSSAG00000044481)	PLCD4 (ENSSSAG00000042288)	ZNF142 (ENSSSAG00000042170)	BCS1 (ENSSSAG00000042144)	ENSSSAG00000041425	vil1 (ENSSSAG00000033358)	ENSSSAG00000022772 #10	ENSSSAG00000086387	ENSSSAG00000015780 #12	agr1 (ENSSSAG00000015737)	traf3ip1 (ENSSSAG00000118564)	asb1 (ENSSSAG00000015679)	TWST2 (ENSSSAG00000015666)	hdac4 (ENSSSAG00000006508)
Northern pike	MODERN SPECIES	15	wdr75 (ENSELUG00000013925)	slc40a1 (ENSELUG00000013894)	asnsd1 (ENSELUG00000013854)	zgc:136439 (ENSELUG00000032874)	ankar (ENSELUG00000013809)	osgepl1 (ENSELUG00000013776)	adat3 (ENSELUG00000013736)	ormdl1 (ENSELUG00000013753)	pms1 (ENSELUG00000013725)	mstnb (ENSELUG00000013706)	ENSELUG00000013684	hibch (ENSELUG00000013663)	ENSELUG00000025026	lss (ENSELUG00000013601) #20	ENSELUG00000000499 #21	ybey (ENSELUG00000013338) #22	usp37 (ENSELUG00000013425)	cnot9 (ENSELUG00000013305)	PLCD4 (ENSELUG00000013282)	ZNF142 (ENSELUG00000013266)	bcs1l (ENSELUG00000013256)	zgc:136333 (ENSELUG00000013221)	zgc:66484 (ENSELUG00000013108)	vil1 (ENSELUG00000013040)	ITGB2 (ENSELUG00000012969) #10	ADARB1 (ENSELUG00000012944) #12	agr3 (ENSELUG00000012848)	traf3ip1 (ENSELUG00000012760)	asb1 (ENSELUG00000012649)	ENSELUG00000033219	twist2 (ENSELUG00000012619)
Osteoglossiformes	ANCESTRAL SPECIES	222		ENSGT00940000160532.g.b	ENSGT00940000154486.b.a.a.b.e.a	ENSGT00530000063599.B.e	ENSGT00390000006330.a.a.b	ENSGT00390000010463.a.b.a	ENSGT01050000244905.F.b	ENSGT01050000244905.D.a	ENSGT00390000015143.n	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00950000183178.b.a.a	ENSGT00940000157085	ENSGT00940000165813.a.a	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000167133	ENSGT00940000160544	ENSGT01090000259987.a.a.a.l #10	ENSGT00390000015709 #11	ENSGT00940000155992.c.b #12	ENSGT00530000063273.b.a.a.j	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000166532.a	ENSGT00940000157440.l.b	ENSGT00940000155324	ENSGT01050000244848.A.b.a
Asian bonytongue	MODERN SPECIES	3	ahr1b (ENSSFOG00015017509)	ENSSFOG00015017498	INPP1 (ENSSFOG00015026325)	MFSD6 (ENSSFOG00015025453)	nab1a (ENSSFOG00015028607)	GLS (ENSSFOG00015017398)	ENSSFOG00015017332	STAT4 (ENSSFOG00015017295)	slc40a1 (ENSSFOG00015017048)	ankar (ENSSFOG00015017103)	osgepl1 (ENSSFOG00015032790)	ormdl1 (ENSSFOG00015017000)	pms1 (ENSSFOG00015016975)	mstnb (ENSSFOG00015007755)	ENSSFOG00015016895 #21	ybey (ENSSFOG00015016861) #22	cnot9 (ENSSFOG00015016841)	ZNF142 (ENSSFOG00015016826)	zgc:136333 (ENSSFOG00015016809)	zgc:66484 (ENSSFOG00015016800)	vil1 (ENSSFOG00015016742)	ITGB2 (ENSSFOG00015016688) #10	ENSSFOG00015025596 #11	adarb1a (ENSSFOG00015026681) #12	agr1 (ENSSFOG00015016605)	traf3ip1 (ENSSFOG00015016550)	asb1 (ENSSFOG00015016536)	twist2 (ENSSFOG00015016493)	hdac4 (ENSSFOG00015016138)	ENSSFOG00015028409	LCT (ENSSFOG00015015738)
P. kingsleyae	MODERN SPECIES	96	ahr2 (ENSPKIG00000015642)	ENSPKIG00000015364	INPP1 (ENSPKIG00000015353)	MFSD6 (ENSPKIG00000015337)	nab1a (ENSPKIG00000015315)	GLS (ENSPKIG00000015269)	ENSPKIG00000015172	STAT4 (ENSPKIG00000015077)	slc40a1 (ENSPKIG00000015019)	osgepl1 (ENSPKIG00000014986)	ormdl1 (ENSPKIG00000014960)	pms1 (ENSPKIG00000014918)	ENSPKIG00000014903	ENSPKIG00000014894	ENSPKIG00000014826 #21	ybey (ENSPKIG00000014793) #22	ZNF142 (ENSPKIG00000014768)	ENSPKIG00000014746	zgc:66484 (ENSPKIG00000014723)	vil1 (ENSPKIG00000014665)	ITGB2 (ENSPKIG00000014440) #10	slx9 (ENSPKIG00000014324) #11	adarb1a (ENSPKIG00000014295) #12	agr1 (ENSPKIG00000014260)	asb1 (ENSPKIG00000014236)	ENSPKIG00000014212	twist2 (ENSPKIG00000014184)	hdac4 (ENSPKIG00000014049)	LCT (ENSPKIG00000013977)	ENSPKIG00000013957	ENSPKIG00000013940
Spotted gar	MODERN SPECIES	650	asnsd1 (ENSLOCG00000008747)	zgc:136439 (ENSLOCG00000008759)	ankar (ENSLOCG00000008769)	osgepl1 (ENSLOCG00000008781)	adat3 (ENSLOCG00000017833)	ormdl1 (ENSLOCG00000008794)	pms1 (ENSLOCG00000008805)	mstnb (ENSLOCG00000008826)	ENSLOCG00000017834	hibch (ENSLOCG00000008833)	ENSLOCG00000008844	ftcd (ENSLOCG00000008855) #18	SPATC1L (ENSLOCG00000008870) #19	lss (ENSLOCG00000008883) #20	MCM3AP (ENSLOCG00000008893) #21	ybey (ENSLOCG00000008907) #22	usp37 (ENSLOCG00000008918)	cnot9 (ENSLOCG00000008931)	PLCD4 (ENSLOCG00000008939)	ZNF142 (ENSLOCG00000008959)	bcs1l (ENSLOCG00000008964)	zgc:136333 (ENSLOCG00000008975)	zgc:66484 (ENSLOCG00000008985)	vil1 (ENSLOCG00000008995)	ITGB2 (ENSLOCG00000009021) #10	slx9 (ENSLOCG00000009039) #11	adarb1a (ENSLOCG00000009051) #12	ENSLOCG00000009064	traf3ip1 (ENSLOCG00000009074)	asb1 (ENSLOCG00000009088)	ENSLOCG00000009094
Reedfish	MODERN SPECIES	16	ENSECRG00000020094	retreg2 (ENSECRG00000020072)	ENSECRG00000020050	abcb6a (ENSECRG00000020018)	cnppd1 (ENSECRG00000020000)	ENSECRG00000019974	prkag3b (ENSECRG00000019925)	ENSECRG00000019900	COL6A2 (ENSECRG00000019859) #17	ENSECRG00000019835 #17	ENSECRG00000019795	COL6A1 (ENSECRG00000019734)	ftcd (ENSECRG00000019704) #18	lss (ENSECRG00000019653) #20	MCM3AP (ENSECRG00000019587) #21	ybey (ENSECRG00000019552) #22	ENSECRG00000019528	cnot9 (ENSECRG00000019449)	PLCD4 (ENSECRG00000019362)	ZNF142 (ENSECRG00000019317)	bcs1l (ENSECRG00000019288)	sh3bp4 (ENSECRG00000019270)	gypc (ENSECRG00000019252)	ENSECRG00000018784	ENSECRG00000018649	ENSECRG00000018623	ENSECRG00000018595	ENSECRG00000018042	ENSECRG00000017957	ENSECRG00000017950	ENSECRG00000016844
Elephant shark	MODERN SPECIES	1724			ENSCMIG00000015233	LMLN (ENSCMIG00000015251)	gpd1c (ENSCMIG00000015264)	OSBPL11 (ENSCMIG00000015270)	ENSCMIG00000015275	snx4 (ENSCMIG00000015294)	ENSCMIG00000015300	ftcd (ENSCMIG00000015307) #18	SPATC1L (ENSCMIG00000015329) #19	lss (ENSCMIG00000015372) #20	ENSCMIG00000015506	ENSCMIG00000015516	MCM3AP (ENSCMIG00000015521) #21	ybey (ENSCMIG00000015526) #22	ENSCMIG00000015533
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183170.b.b #22
Hagfish	MODERN SPECIES	390														ZEB2 (ENSEBUG00000001421)	ENSEBUG00000005373	ENSEBUG00000017058 #22	ENSEBUG00000013083	ENSEBUG00000004088	wdr12 (ENSEBUG00000013797)	ENSEBUG00000011979	fign (ENSEBUG00000000400)	GRB10 (ENSEBUG00000014223)	ENSEBUG00000004701	ENSEBUG00000012738	ENSEBUG00000007485 ##16
Lamprey	MODERN SPECIES	86	ENSPMAG00000009727	ENSPMAG00000009729	ENSPMAG00000009730	ENSPMAG00000010230	ENSPMAG00000009731	ENSPMAG00000009733	ENSPMAG00000009738	ENSPMAG00000009739	ENSPMAG00000009742	ENSPMAG00000009743	ENSPMAG00000009745	ENSPMAG00000009746	ENSPMAG00000009747	ENSPMAG00000009748	ENSPMAG00000009749	ENSPMAG00000009757 #22	ENSPMAG00000009759	aida (ENSPMAG00000009760)	ENSPMAG00000009763
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a ##22
Gnathostomata	ANCESTRAL SPECIES	349													ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.C
Elephant shark	MODERN SPECIES	1498	ENSCMIG00000019930	ENSCMIG00000019929	exoc3 (ENSCMIG00000019925)	pigm (ENSCMIG00000019924)	pdcd6 (ENSCMIG00000019923)	ANKS6 (ENSCMIG00000019922)	ENSCMIG00000019921	SLC12A7 (ENSCMIG00000019904)	NKD2 (ENSCMIG00000019876)	ENSCMIG00000019875	ENSCMIG00000019873	ENSCMIG00000019871	ENSCMIG00000019867	ENSCMIG00000019865	trip13 (ENSCMIG00000019854)	brd9 (ENSCMIG00000019825) ##22	ENSCMIG00000019810	ENSCMIG00000019807	TPPP (ENSCMIG00000019805)	ENSCMIG00000019803	slc9a3.2 (ENSCMIG00000019798)	ENSCMIG00000019790	ENSCMIG00000019788	ENSCMIG00000019787	ENSCMIG00000019786	ENSCMIG00000019785	FHOD3 (ENSCMIG00000019759)	RPRD1A (ENSCMIG00000019738)	slc6a19b (ENSCMIG00000019721)	slc6a18 (ENSCMIG00000019689)	TERT (ENSCMIG00000019682)
Euteleostomi	ANCESTRAL SPECIES	356													ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.C	ENSGT00940000162507.A	ENSGT01030000234531.C
Actinopterygii	ANCESTRAL SPECIES	407														ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C
Neopterygii	ANCESTRAL SPECIES	359													ENSGT00940000162507.A	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616
Osteoglossocephalai	ANCESTRAL SPECIES	230									ENSGT00940000156245.a.a	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000166800	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT01030000235080	ENSGT00940000157781
Clupeocephala	ANCESTRAL SPECIES	8	ENSGT00940000156475.e	ENSGT00390000007287	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000166800	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT01030000235080	ENSGT00940000157781	ENSGT00940000157068.d
Euteleosteomorpha	ANCESTRAL SPECIES	65	ENSGT00940000156475.e	ENSGT00390000007287	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT01030000235080	ENSGT00940000157781	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a
Acanthomorphata	ANCESTRAL SPECIES	31	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Climbing perch	MODERN SPECIES	7	gsdmeb (ENSATEG00000005633)	pals2a (ENSATEG00000005570)	NPY (ENSATEG00000005520)	ENSATEG00000026729	smpd5 (ENSATEG00000005476)	ENSATEG00000005454 #19	grinab (ENSATEG00000005446)	rbm24b (ENSATEG00000005396)	ENSATEG00000005222	ENSATEG00000005198	ptdss1a (ENSATEG00000005148)	ENSATEG00000005123	PLEKHG4B (ENSATEG00000005079)	NKD2 (ENSATEG00000005069)	trip13 (ENSATEG00000005020)	brd9 (ENSATEG00000004939) ##22	ZDHHC11 (ENSATEG00000004924)	TPPP (ENSATEG00000004903)	cep72 (ENSATEG00000029235)	ENSATEG00000004869	ENSATEG00000004826	ccdc12 (ENSATEG00000004807)	ENSATEG00000004613	ENSATEG00000004600	ENSATEG00000004588	rbm12bb (ENSATEG00000004578)	ENSATEG00000025965	upp1 (ENSATEG00000004487)	ENSATEG00000027238	ENSATEG00000004452	ENSATEG00000004430
Siamese fighting fish	MODERN SPECIES	7	gsdmeb (ENSBSLG00000020945)	pals2a (ENSBSLG00000019983)	NPY (ENSBSLG00000019966)	malsu1 (ENSBSLG00000019936)	smpd5 (ENSBSLG00000019925)	SPATC1L (ENSBSLG00000019910) #19	grinab (ENSBSLG00000019818)	rbm24b (ENSBSLG00000019765)	KIF13A (ENSBSLG00000019457)	ENSBSLG00000019178	ptdss1a (ENSBSLG00000018989)	ENSBSLG00000018944	PLEKHG4B (ENSBSLG00000018790)	NKD2 (ENSBSLG00000018747)	trip13 (ENSBSLG00000018232)	brd9 (ENSBSLG00000018125) ##22	ZDHHC11 (ENSBSLG00000018117)	TPPP (ENSBSLG00000018111)	cep72 (ENSBSLG00000018098)	ENSBSLG00000018089	ENSBSLG00000018077	ccdc12 (ENSBSLG00000018067)	NBEAL2 (ENSBSLG00000016811)	ENSBSLG00000015746	ENSBSLG00000015540	ENSBSLG00000015521	upp1 (ENSBSLG00000015491)	ENSBSLG00000015459	HEY1 (ENSBSLG00000015441)	fabp4b (ENSBSLG00000015305)	fam8a1b (ENSBSLG00000015166)
Zig-zag eel	MODERN SPECIES	7	gsdmeb (ENSMAMG00000012973)	pals2a (ENSMAMG00000012941)	NPY (ENSMAMG00000012919)	ENSMAMG00000024695	smpd5 (ENSMAMG00000012885)	ENSMAMG00000027454 #19	grinab (ENSMAMG00000012853)	rbm24b (ENSMAMG00000012841)	ENSMAMG00000012667	ENSMAMG00000012632	ptdss1a (ENSMAMG00000012595)	ENSMAMG00000012581	ENSMAMG00000012564	NKD2 (ENSMAMG00000012546)	trip13 (ENSMAMG00000012484)	brd9 (ENSMAMG00000012433) ##22	ZDHHC11 (ENSMAMG00000012422)	TPPP (ENSMAMG00000012413)	ENSMAMG00000012319	ccdc12 (ENSMAMG00000012165)	ENSMAMG00000012073	ENSMAMG00000012060	ENSMAMG00000012020	ENSMAMG00000025805	upp1 (ENSMAMG00000011929)	STMN2 (ENSMAMG00000011888)	ENSMAMG00000011873	ENSMAMG00000027381	ENSMAMG00000011840
Carangaria	ANCESTRAL SPECIES	1	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Seriola	ANCESTRAL SPECIES	56	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781.k	ENSGT00940000157781.l	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d
Greater amberjack	MODERN SPECIES	181	gsdmeb (ENSSDUG00000005801)	pals2a (ENSSDUG00000005815)	NPY (ENSSDUG00000005855)	malsu1 (ENSSDUG00000005872)	smpd5 (ENSSDUG00000005881)	ENSSDUG00000005909 #19	grinab (ENSSDUG00000005925)	rbm24b (ENSSDUG00000005955)	KIF13A (ENSSDUG00000005976)	ENSSDUG00000006053	ptdss1a (ENSSDUG00000006068)	ENSSDUG00000006111	PLEKHG4B (ENSSDUG00000006130)	NKD2 (ENSSDUG00000006226)	trip13 (ENSSDUG00000006246)	brd9 (ENSSDUG00000006310) ##22	ZDHHC11 (ENSSDUG00000006396)	TPPP (ENSSDUG00000006408)	cep72 (ENSSDUG00000006423)	ENSSDUG00000006453	ENSSDUG00000006501	ccdc12 (ENSSDUG00000006549)	NBEAL2 (ENSSDUG00000006656)	ENSSDUG00000006825	ENSSDUG00000006836	rbm12bb (ENSSDUG00000006856)	ENSSDUG00000006858	upp1 (ENSSDUG00000006872)	upp1 (ENSSDUG00000006907)	stmn2b (ENSSDUG00000006930)	HEY1 (ENSSDUG00000006942)
Yellowtail amberjack	MODERN SPECIES	2583	gsdmeb (ENSSLDG00000015204)	pals2a (ENSSLDG00000015241)	NPY (ENSSLDG00000015297)	malsu1 (ENSSLDG00000015308)	smpd5 (ENSSLDG00000015320)	ENSSLDG00000015341 #19	grinab (ENSSLDG00000015358)	rbm24b (ENSSLDG00000015378)	KIF13A (ENSSLDG00000015412)	ENSSLDG00000015467	ptdss1a (ENSSLDG00000015491)	ENSSLDG00000015528	PLEKHG4B (ENSSLDG00000015566)	NKD2 (ENSSLDG00000015674)	trip13 (ENSSLDG00000015703)	brd9 (ENSSLDG00000015739) ##22	ZDHHC11 (ENSSLDG00000015798)	TPPP (ENSSLDG00000015820)	cep72 (ENSSLDG00000015835)	ENSSLDG00000015889	ENSSLDG00000015924	ccdc12 (ENSSLDG00000015956)	NBEAL2 (ENSSLDG00000016002)	ENSSLDG00000016085	ENSSLDG00000016113	rbm12bb (ENSSLDG00000016156)	upp1 (ENSSLDG00000016176)	upp1 (ENSSLDG00000016210)	stmn2b (ENSSLDG00000016230)	HEY1 (ENSSLDG00000016254)	fabp4b (ENSSLDG00000016283)
Barramundi perch	MODERN SPECIES	17	gsdmeb (ENSLCAG00010011962)	pals2a (ENSLCAG00010011974)	NPY (ENSLCAG00010012003)	malsu1 (ENSLCAG00010012008)	smpd5 (ENSLCAG00010012017)	ENSLCAG00010012021 #19	grinab (ENSLCAG00010012027)	rbm24b (ENSLCAG00010012033)	KIF13A (ENSLCAG00010012157)	ptdss1a (ENSLCAG00010012536)	ENSLCAG00010012579	ENSLCAG00010012603	PLEKHG4B (ENSLCAG00010012618)	NKD2 (ENSLCAG00010012639)	trip13 (ENSLCAG00010012649)	brd9 (ENSLCAG00010012662) ##22	ZDHHC11 (ENSLCAG00010012675)	TPPP (ENSLCAG00010012683)	cep72 (ENSLCAG00010012688)	ENSLCAG00010012692	ENSLCAG00010012697	ccdc12 (ENSLCAG00010012701)	NBEAL2 (ENSLCAG00010012758)	ENSLCAG00010012969	SETD2 (ENSLCAG00010012981)	rbm12bb (ENSLCAG00010013024)	ENSLCAG00010013026	upp1 (ENSLCAG00010013031)	ENSLCAG00010013034	HEY1 (ENSLCAG00010013038)	ENSLCAG00010013042
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00940000155957.a	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Turbot	MODERN SPECIES		OSBPL3 (ENSSMAG00000020219)	gsdmeb (ENSSMAG00000020200)	pals2a (ENSSMAG00000020151)	NPY (ENSSMAG00000026722)	ENSSMAG00000033668	smpd5 (ENSSMAG00000020132)	grinab (ENSSMAG00000020122)	rbm24b (ENSSMAG00000033434)	ENSSMAG00000020055	ENSSMAG00000020049	ptdss1a (ENSSMAG00000020036)	ENSSMAG00000036323	ENSSMAG00000020006	NKD2 (ENSSMAG00000019999)	trip13 (ENSSMAG00000019971)	brd9 (ENSSMAG00000019933) ##22	ZDHHC11 (ENSSMAG00000019925)	TPPP (ENSSMAG00000019905)	cep72 (ENSSMAG00000019896)	ENSSMAG00000019892	ENSSMAG00000019865	ccdc12 (ENSSMAG00000019856)	ENSSMAG00000019750	ENSSMAG00000019741	ENSSMAG00000019710	rbm12bb (ENSSMAG00000019708)	ENSSMAG00000019697	upp1 (ENSSMAG00000019687)	ENSSMAG00000019673	ENSSMAG00000019653	ENSSMAG00000019646
Tongue sole	MODERN SPECIES	4	ENSCSEG00000004304	ENSCSEG00000004309	gsdmeb (ENSCSEG00000004310)	pals2a (ENSCSEG00000004315)	malsu1 (ENSCSEG00000004324)	smpd5 (ENSCSEG00000004339)	grinab (ENSCSEG00000004351)	rbm24b (ENSCSEG00000004378)	KIF13A (ENSCSEG00000004383)	ENSCSEG00000004422	ptdss1a (ENSCSEG00000004423)	ENSCSEG00000004427	PLEKHG4B (ENSCSEG00000004437)	NKD2 (ENSCSEG00000004467)	trip13 (ENSCSEG00000004473)	brd9 (ENSCSEG00000004488) ##22	ZDHHC11 (ENSCSEG00000004514)	TPPP (ENSCSEG00000004519)	cep72 (ENSCSEG00000004523)	ENSCSEG00000004531	ENSCSEG00000004535	ccdc12 (ENSCSEG00000004543)	NBEAL2 (ENSCSEG00000004551)	ENSCSEG00000004583	ENSCSEG00000004591	rbm12bb (ENSCSEG00000004610)	ENSCSEG00000004616	upp1 (ENSCSEG00000004619)	ENSCSEG00000004626	HEY1 (ENSCSEG00000004656)	fabp4b (ENSCSEG00000004659)
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Tetraodontidae	ANCESTRAL SPECIES	14	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00390000014996	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Fugu	MODERN SPECIES	19	pals2a (ENSTRUG00000014887)	NPY (ENSTRUG00000014884)	smpd5 (ENSTRUG00000014862)	ENSTRUG00000032851 #19	grinab (ENSTRUG00000021143)	rbm24b (ENSTRUG00000014826)	KIF13A (ENSTRUG00000014608)	ENSTRUG00000014606	ptdss1a (ENSTRUG00000014544)	ENSTRUG00000032919	ENSTRUG00000028470	PLEKHG4B (ENSTRUG00000014408)	NKD2 (ENSTRUG00000024160)	trip13 (ENSTRUG00000014308)	mrpl32 (ENSTRUG00000014307)	brd9 (ENSTRUG00000014205) ##22	ZDHHC11 (ENSTRUG00000020058)	TPPP (ENSTRUG00000031630)	cep72 (ENSTRUG00000014157)	ENSTRUG00000026062	ENSTRUG00000014028	ccdc12 (ENSTRUG00000014023)	NBEAL2 (ENSTRUG00000013855)	ENSTRUG00000032635	ENSTRUG00000013742	rbm12bb (ENSTRUG00000013738)	ENSTRUG00000029869	upp1 (ENSTRUG00000013660)	ENSTRUG00000013626	HEY1 (ENSTRUG00000013573)	ENSTRUG00000019876
Tetraodon	MODERN SPECIES	23	pals2a (ENSTNIG00000018422)	NPY (ENSTNIG00000018421)	ENSTNIG00000000117	smpd5 (ENSTNIG00000018420)	ENSTNIG00000018419 #19	grinab (ENSTNIG00000018418)	rbm24b (ENSTNIG00000018417)	KIF13A (ENSTNIG00000018416)	ENSTNIG00000001068	ptdss1a (ENSTNIG00000018415)	ENSTNIG00000013537	PLEKHG4B (ENSTNIG00000018414)	NKD2 (ENSTNIG00000000102)	trip13 (ENSTNIG00000018413)	mrpl32 (ENSTNIG00000018412)	brd9 (ENSTNIG00000018411) ##22	ZDHHC11 (ENSTNIG00000018410)	TPPP (ENSTNIG00000018409)	ENSTNIG00000018408	ccdc12 (ENSTNIG00000018407)	NBEAL2 (ENSTNIG00000018406)	ENSTNIG00000018405	ENSTNIG00000018404	upp1 (ENSTNIG00000018403)	ENSTNIG00000018402	HEY1 (ENSTNIG00000018401)	ENSTNIG00000018400	fam8a1b (ENSTNIG00000018399)	ATXN1 (ENSTNIG00000018398)	ITGA8 (ENSTNIG00000018397)	mindy3 (ENSTNIG00000018396)
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a	ENSGT00390000005939.a.a.b
Pike perch	MODERN SPECIES	15	gsdmeb (ENSSLUG00000005622)	pals2a (ENSSLUG00000005650)	NPY (ENSSLUG00000005981)	malsu1 (ENSSLUG00000005984)	smpd5 (ENSSLUG00000005989)	ENSSLUG00000006005 #19	grinab (ENSSLUG00000006010)	rbm24b (ENSSLUG00000006035)	KIF13A (ENSSLUG00000006064)	ENSSLUG00000006208	ptdss1a (ENSSLUG00000006218)	ENSSLUG00000006245	PLEKHG4B (ENSSLUG00000006276)	NKD2 (ENSSLUG00000006338)	trip13 (ENSSLUG00000006350)	brd9 (ENSSLUG00000006388) ##22	ZDHHC11 (ENSSLUG00000006925)	ENSSLUG00000006940	ENSSLUG00000006946	TPPP (ENSSLUG00000006959)	ENSSLUG00000006971	ccdc12 (ENSSLUG00000007011)	NBEAL2 (ENSSLUG00000007105)	ENSSLUG00000007694	ENSSLUG00000007755	ENSSLUG00000007980	upp1 (ENSSLUG00000007989)	stmn2b (ENSSLUG00000007998)	HEY1 (ENSSLUG00000008002)	fabp4b (ENSSLUG00000008007)	fam8a1b (ENSSLUG00000008010)
Channel bull blenny	MODERN SPECIES	7	gsdmeb (ENSCGOG00000024066)	pals2a (ENSCGOG00000024060)	NPY (ENSCGOG00000024057)	malsu1 (ENSCGOG00000024055)	smpd5 (ENSCGOG00000024053)	ENSCGOG00000024051 #19	grinab (ENSCGOG00000024049)	rbm24b (ENSCGOG00000024046)	KIF13A (ENSCGOG00000023817)	ENSCGOG00000023740	ptdss1a (ENSCGOG00000023702)	ENSCGOG00000023697	PLEKHG4B (ENSCGOG00000023687)	NKD2 (ENSCGOG00000023682)	trip13 (ENSCGOG00000023656)	brd9 (ENSCGOG00000023556) ##22	ZDHHC11 (ENSCGOG00000023542)	TPPP (ENSCGOG00000023541)	cep72 (ENSCGOG00000023538)	ccdc12 (ENSCGOG00000023530)	NBEAL2 (ENSCGOG00000023493)	ENSCGOG00000023486	ENSCGOG00000023451	rbm12bb (ENSCGOG00000023440)	ENSCGOG00000023438	upp1 (ENSCGOG00000023435)	ENSCGOG00000023433	HEY1 (ENSCGOG00000023432)	fabp4b (ENSCGOG00000023430)	fam8a1b (ENSCGOG00000023429)	ATXN1 (ENSCGOG00000023427)
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00940000155957.a	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a
Lumpfish	MODERN SPECIES	7	OSBPL3 (ENSCLMG00005008379)	gsdmeb (ENSCLMG00005010079)	pals2a (ENSCLMG00005010087)	NPY (ENSCLMG00005010150)	malsu1 (ENSCLMG00005010213)	smpd5 (ENSCLMG00005010215)	grinab (ENSCLMG00005010219)	rbm24b (ENSCLMG00005010222)	KIF13A (ENSCLMG00005010260)	ENSCLMG00005011045	ptdss1a (ENSCLMG00005011049)	ENSCLMG00005011158	PLEKHG4B (ENSCLMG00005011159)	NKD2 (ENSCLMG00005011160)	trip13 (ENSCLMG00005011161)	brd9 (ENSCLMG00005011166) ##22	ZDHHC11 (ENSCLMG00005011211)	TPPP (ENSCLMG00005011216)	cep72 (ENSCLMG00005011220)	ENSCLMG00005011223	ccdc12 (ENSCLMG00005011234)	NBEAL2 (ENSCLMG00005011255)	ENSCLMG00005012090	ENSCLMG00005012096	rbm12bb (ENSCLMG00005013861)	upp1 (ENSCLMG00005013864)	ENSCLMG00005013867	HEY1 (ENSCLMG00005013988)	fabp4b (ENSCLMG00005013991)	fam8a1b (ENSCLMG00005013992)	ATXN1 (ENSCLMG00005013993)
Stickleback	MODERN SPECIES	19	snx10b (ENSGACG00000008327)	cbx3b (ENSGACG00000008334)	ENSGACG00000008337	OSBPL3 (ENSGACG00000008359)	gsdmeb (ENSGACG00000008400)	ENSGACG00000008411	pals2a (ENSGACG00000008428)	grinab (ENSGACG00000008435)	rbm24b (ENSGACG00000008472)	KIF13A (ENSGACG00000008481)	NHLRC1 (ENSGACG00000008509)	ptdss1a (ENSGACG00000008513)	PLEKHG4B (ENSGACG00000008538)	NKD2 (ENSGACG00000008552)	trip13 (ENSGACG00000008559)	brd9 (ENSGACG00000008576) ##22	ENSGACG00000008591	TPPP (ENSGACG00000008593)	cep72 (ENSGACG00000008608)	ENSGACG00000008615	ccdc12 (ENSGACG00000008629)	NBEAL2 (ENSGACG00000008637)	ENSGACG00000008667	ENSGACG00000008671	rbm12bb (ENSGACG00000008682)	upp1 (ENSGACG00000008684)	ENSGACG00000008708	HEY1 (ENSGACG00000008712)	fabp4b (ENSGACG00000008725)	fam8a1b (ENSGACG00000008744)	ATXN1 (ENSGACG00000008747)
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Gilthead seabream	MODERN SPECIES	8	malsu1 (ENSSAUG00010008745)	smpd5 (ENSSAUG00010008746)	ENSSAUG00010008747 #19	grinab (ENSSAUG00010008748)	rbm24b (ENSSAUG00010008749)	KIF13A (ENSSAUG00010008827)	NHLRC1 (ENSSAUG00010014295)	ptdss1a (ENSSAUG00010014296)	ENSSAUG00010014306	ENSSAUG00010014307	ENSSAUG00010014308	ENSSAUG00010014310	PLEKHG4B (ENSSAUG00010014313)	NKD2 (ENSSAUG00010014316)	trip13 (ENSSAUG00010014317)	brd9 (ENSSAUG00010014347) ##22	ZDHHC11 (ENSSAUG00010014379)	TPPP (ENSSAUG00010014389)	cep72 (ENSSAUG00010014557)	ENSSAUG00010014558	ENSSAUG00010014563	ccdc12 (ENSSAUG00010014566)	NBEAL2 (ENSSAUG00010014640)	ENSSAUG00010016814	ENSSAUG00010016825	rbm12bb (ENSSAUG00010016930)	ENSSAUG00010016931	upp1 (ENSSAUG00010016933)	upp1 (ENSSAUG00010016935)	ENSSAUG00010016960	HEY1 (ENSSAUG00010016961)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Large yellow croaker	MODERN SPECIES	484	gsdmeb (ENSLCRG00005009384)	pals2a (ENSLCRG00005009124)	NPY (ENSLCRG00005009118)	malsu1 (ENSLCRG00005009117)	smpd5 (ENSLCRG00005009115)	ENSLCRG00005009114 #19	grinab (ENSLCRG00005009112)	rbm24b (ENSLCRG00005009111)	KIF13A (ENSLCRG00005008814)	ENSLCRG00005008810	ptdss1a (ENSLCRG00005008793)	ENSLCRG00005008791	PLEKHG4B (ENSLCRG00005008790)	NKD2 (ENSLCRG00005008788)	trip13 (ENSLCRG00005008383)	brd9 (ENSLCRG00005008371) ##22	ZDHHC11 (ENSLCRG00005008369)	TPPP (ENSLCRG00005008368)	cep72 (ENSLCRG00005008364)	ENSLCRG00005008362	ENSLCRG00005008358	ccdc12 (ENSLCRG00005008355)	NBEAL2 (ENSLCRG00005008339)	ENSLCRG00005008336	ENSLCRG00005007451	rbm12bb (ENSLCRG00005007426)	ENSLCRG00005007424	upp1 (ENSLCRG00005007421)	ENSLCRG00005007418	HEY1 (ENSLCRG00005007416)	fabp4b (ENSLCRG00005007413)
European seabass	MODERN SPECIES	6	C7orf31 (ENSDLAG00005015785)	ENSDLAG00005015884	OSBPL3 (ENSDLAG00005014842)	pals2a (ENSDLAG00005013839)	ENSDLAG00005013794	smpd5 (ENSDLAG00005013786)	rbm24b (ENSDLAG00005027279)	ENSDLAG00005014793	ENSDLAG00005013447	ENSDLAG00005013435	ptdss1a (ENSDLAG00005013253)	ENSDLAG00005013245	ENSDLAG00005013152	NKD2 (ENSDLAG00005013138)	trip13 (ENSDLAG00005012770)	brd9 (ENSDLAG00005011888) ##22	ZDHHC11 (ENSDLAG00005011874)	TPPP (ENSDLAG00005011868)	cep72 (ENSDLAG00005029855)	ENSDLAG00005011846	ENSDLAG00005031327	ccdc12 (ENSDLAG00005011820)	ENSDLAG00005011530	ENSDLAG00005028226	ENSDLAG00005010269	rbm12bb (ENSDLAG00005027878)	rbm12bb (ENSDLAG00005026865)	ENSDLAG00005010253	ENSDLAG00005010174	ENSDLAG00005010162	ENSDLAG00005010150
Ballan wrasse	MODERN SPECIES	311															trip13 (ENSLBEG00000025112)	brd9 (ENSLBEG00000025017) ##22	ZDHHC11 (ENSLBEG00000024962)	TPPP (ENSLBEG00000024934)	cep72 (ENSLBEG00000024906)	ENSLBEG00000024874	ENSLBEG00000024832	ccdc12 (ENSLBEG00000024714)	NBEAL2 (ENSLBEG00000024569)	ENSLBEG00000024514	ENSLBEG00000024474	ENSLBEG00000024447	ENSLBEG00000024423	upp1 (ENSLBEG00000024391)	ENSLBEG00000024365	HEY1 (ENSLBEG00000024340)	fabp4b (ENSLBEG00000024324)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Oryzias	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01070000254166	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.f	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01070000254166	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.f	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Chinese medaka	MODERN SPECIES	493	cbx3b (ENSOSIG00000003938)	ENSOSIG00000003945	OSBPL3 (ENSOSIG00000004039)	gsdmeb (ENSOSIG00000005215)	NPY (ENSOSIG00000005297)	malsu1 (ENSOSIG00000005302)	smpd5 (ENSOSIG00000005305)	grinab (ENSOSIG00000005309)	rbm24b (ENSOSIG00000005330)	ENSOSIG00000006028	ptdss1a (ENSOSIG00000006032)	ENSOSIG00000006102	PLEKHG4B (ENSOSIG00000006105)	NKD2 (ENSOSIG00000006111)	trip13 (ENSOSIG00000006118)	brd9 (ENSOSIG00000006120) ##22	ZDHHC11 (ENSOSIG00000006342)	TPPP (ENSOSIG00000006347)	cep72 (ENSOSIG00000006471)	ENSOSIG00000006474	ENSOSIG00000006479	ccdc12 (ENSOSIG00000006485)	ENSOSIG00000007222	ENSOSIG00000007225	rbm12bb (ENSOSIG00000007701)	ENSOSIG00000007702	upp1 (ENSOSIG00000007704)	ENSOSIG00000007708	HEY1 (ENSOSIG00000007959)	fabp4b (ENSOSIG00000007961)	fam8a1b (ENSOSIG00000008079)
Japanese Medaka HdrR	MODERN SPECIES	7	OSBPL3 (ENSORLG00000007774)	gsdmeb (ENSORLG00000007783)	pals2a (ENSORLG00000007872)	ENSORLG00000007880	smpd5 (ENSORLG00000007890)	ENSORLG00000021836 #19	grinab (ENSORLG00000007899)	rbm24b (ENSORLG00000007916)	KIF13A (ENSORLG00000007992)	ENSORLG00000008006	ptdss1a (ENSORLG00000008025)	ENSORLG00000024091	PLEKHG4B (ENSORLG00000008037)	NKD2 (ENSORLG00000008053)	trip13 (ENSORLG00000008063)	brd9 (ENSORLG00000008087) ##22	ZDHHC11 (ENSORLG00000025787)	TPPP (ENSORLG00000008093)	cep72 (ENSORLG00000008103)	ENSORLG00000008108	ENSORLG00000008118	ccdc12 (ENSORLG00000008126)	NBEAL2 (ENSORLG00000008199)	ENSORLG00000008217	ENSORLG00000024103	rbm12bb (ENSORLG00000008228)	ENSORLG00000024466	upp1 (ENSORLG00000008240)	ENSORLG00000008251	ENSORLG00000008268	fabp4b (ENSORLG00000008282)
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h.g	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01070000254166.a.a	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.f	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Indian medaka	MODERN SPECIES	5	grinab (ENSOMEG00000021436)	grinab (ENSOMEG00000021457)	grinab (ENSOMEG00000021508)	rbm24b (ENSOMEG00000021525)	KIF13A (ENSOMEG00000021578)	ptdss1a (ENSOMEG00000021618)	ENSOMEG00000021629	ENSOMEG00000021643	ENSOMEG00000021657	ENSOMEG00000021666	ENSOMEG00000021684	ENSOMEG00000021698	PLEKHG4B (ENSOMEG00000021926)	NKD2 (ENSOMEG00000021990)	trip13 (ENSOMEG00000022037)	brd9 (ENSOMEG00000022124) ##22	ZDHHC11 (ENSOMEG00000022145)	TPPP (ENSOMEG00000022157)	cep72 (ENSOMEG00000022220)	ENSOMEG00000022236	ENSOMEG00000022270	ccdc12 (ENSOMEG00000022304)	NBEAL2 (ENSOMEG00000022442)	ENSOMEG00000022465	ENSOMEG00000022507	rbm12bb (ENSOMEG00000022523)	ENSOMEG00000000597	upp1 (ENSOMEG00000022562)	ENSOMEG00000003199	HEY1 (ENSOMEG00000003213)	fabp4b (ENSOMEG00000003227)
Javanese ricefish	MODERN SPECIES	7	pals2a (ENSOJAG00000008985)	NPY (ENSOJAG00000009530)	malsu1 (ENSOJAG00000009536)	smpd5 (ENSOJAG00000009545)	ENSOJAG00000009553 #19	grinab (ENSOJAG00000009557)	rbm24b (ENSOJAG00000009561)	KIF13A (ENSOJAG00000009627)	ENSOJAG00000011744	ptdss1a (ENSOJAG00000011754)	ENSOJAG00000011801	ENSOJAG00000011809	PLEKHG4B (ENSOJAG00000011855)	NKD2 (ENSOJAG00000012028)	trip13 (ENSOJAG00000012057)	brd9 (ENSOJAG00000012319) ##22	ZDHHC11 (ENSOJAG00000013660)	TPPP (ENSOJAG00000013670)	cep72 (ENSOJAG00000013677)	ENSOJAG00000013700	ENSOJAG00000013731	ccdc12 (ENSOJAG00000013749)	ENSOJAG00000014609	ENSOJAG00000014629	rbm12bb (ENSOJAG00000014972)	ENSOJAG00000014984	upp1 (ENSOJAG00000015027)	ENSOJAG00000015283	HEY1 (ENSOJAG00000015290)	ENSOJAG00000015299	fam8a1b (ENSOJAG00000015304)
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a	ENSGT00390000005939.a.a.b
Turquoise killifish	DUPLICATION
Turquoise killifish	MODERN SPECIES	796																brd9 (ENSNFUG00015014850) ##22	ENSNFUG00015014902
Turquoise killifish	MODERN SPECIES	673																ENSNFUG00015012474 ##22
Mangrove rivulus	MODERN SPECIES	92	gsdmeb (ENSKMAG00000014650)	pals2a (ENSKMAG00000014598)	NPY (ENSKMAG00000014576)	malsu1 (ENSKMAG00000014561)	smpd5 (ENSKMAG00000014523)	ENSKMAG00000014506 #19	grinab (ENSKMAG00000014477)	rbm24b (ENSKMAG00000014458)	KIF13A (ENSKMAG00000014378)	NHLRC1 (ENSKMAG00000014351)	ptdss1a (ENSKMAG00000014322)	ENSKMAG00000014289	ENSKMAG00000014257	NKD2 (ENSKMAG00000014227)	trip13 (ENSKMAG00000014170)	brd9 (ENSKMAG00000014116) ##22	ZDHHC11 (ENSKMAG00000014085)	TPPP (ENSKMAG00000014056)	cep72 (ENSKMAG00000014026)	ENSKMAG00000013968	ccdc12 (ENSKMAG00000013891)	NBEAL2 (ENSKMAG00000013801)	ENSKMAG00000013749	ENSKMAG00000013724	rbm12bb (ENSKMAG00000013715)	rbm12bb (ENSKMAG00000013704)	upp1 (ENSKMAG00000013633)	ENSKMAG00000013603	HEY1 (ENSKMAG00000013571)	fam8a1b (ENSKMAG00000013533)	ATXN1 (ENSKMAG00000013507)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
NAME_4	ANCESTRAL SPECIES	1	ENSGT00940000155957.a	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Mummichog	MODERN SPECIES	2197	OSBPL3 (ENSFHEG00000015476)	gsdmeb (ENSFHEG00000015490)	pals2a (ENSFHEG00000015540)	NPY (ENSFHEG00000015559)	malsu1 (ENSFHEG00000015565)	smpd5 (ENSFHEG00000015589)	ENSFHEG00000015597 #19	grinab (ENSFHEG00000015607)	rbm24b (ENSFHEG00000015627)	KIF13A (ENSFHEG00000000386)	ENSFHEG00000015806	ptdss1a (ENSFHEG00000015844)	PLEKHG4B (ENSFHEG00000015863)	NKD2 (ENSFHEG00000015906)	trip13 (ENSFHEG00000015975)	brd9 (ENSFHEG00000016065) ##22	ZDHHC11 (ENSFHEG00000016086)	TPPP (ENSFHEG00000016098)	cep72 (ENSFHEG00000016122)	ENSFHEG00000016136	ENSFHEG00000016203	ccdc12 (ENSFHEG00000016247)	NBEAL2 (ENSFHEG00000000412)	ENSFHEG00000016410	ENSFHEG00000016416	rbm12bb (ENSFHEG00000016425)	ENSFHEG00000016448	upp1 (ENSFHEG00000016478)	ENSFHEG00000016506	HEY1 (ENSFHEG00000016508)	ENSFHEG00000017203
Sheepshead minnow	MODERN SPECIES	114	ENSCVAG00000012030	OSBPL3 (ENSCVAG00000011997)	gsdmeb (ENSCVAG00000011882)	pals2a (ENSCVAG00000011871)	NPY (ENSCVAG00000011845)	malsu1 (ENSCVAG00000011829)	smpd5 (ENSCVAG00000011824)	grinab (ENSCVAG00000011815)	rbm24b (ENSCVAG00000011805)	KIF13A (ENSCVAG00000011787)	ENSCVAG00000011607	ptdss1a (ENSCVAG00000011598)	PLEKHG4B (ENSCVAG00000011569)	NKD2 (ENSCVAG00000011535)	trip13 (ENSCVAG00000000883)	brd9 (ENSCVAG00000011481) ##22	ZDHHC11 (ENSCVAG00000011386)	TPPP (ENSCVAG00000011373)	cep72 (ENSCVAG00000011368)	ENSCVAG00000011353	ccdc12 (ENSCVAG00000011342)	NBEAL2 (ENSCVAG00000011318)	ENSCVAG00000011070	ENSCVAG00000011061	rbm12bb (ENSCVAG00000011047)	ENSCVAG00000011040	upp1 (ENSCVAG00000011036)	stmn2b (ENSCVAG00000011029)	HEY1 (ENSCVAG00000011007)	fam8a1b (ENSCVAG00000010989)	fabp4b (ENSCVAG00000010949)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813.b	ENSGT01030000234813.a	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b.i	ENSGT00390000007346.a
Poecilia	ANCESTRAL SPECIES		ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813.b	ENSGT01030000234813.a	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b.i	ENSGT00390000007346.a
NAME_6	ANCESTRAL SPECIES	168					ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813.b	ENSGT01030000234813.a	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b.i	ENSGT00390000007346.a
Sailfin molly	MODERN SPECIES	86						SPATC1L (ENSPLAG00000019507) #19	grinab (ENSPLAG00000019487)	rbm24b (ENSPLAG00000019473)	KIF13A (ENSPLAG00000019449)	ENSPLAG00000019325	ptdss1a (ENSPLAG00000019320)	ENSPLAG00000019281	ENSPLAG00000019255	NKD2 (ENSPLAG00000019222)	trip13 (ENSPLAG00000019194)	brd9 (ENSPLAG00000019150) ##22	ZDHHC11 (ENSPLAG00000019093)	TPPP (ENSPLAG00000019078)	cep72 (ENSPLAG00000019049)	ENSPLAG00000019028	ccdc12 (ENSPLAG00000019010)	NBEAL2 (ENSPLAG00000018993)	ENSPLAG00000018804	ENSPLAG00000018798	rbm12bb (ENSPLAG00000018782)	ENSPLAG00000018778	upp1 (ENSPLAG00000018774)	ENSPLAG00000018753	HEY1 (ENSPLAG00000018734)	fabp4b (ENSPLAG00000018719)	fam8a1b (ENSPLAG00000018712)
Amazon molly	MODERN SPECIES	556				ENSPFOG00000024443	ENSPFOG00000022723 #19	grinab (ENSPFOG00000000018)	rbm24b (ENSPFOG00000000019)	KIF13A (ENSPFOG00000000036)	rbm24b (ENSPFOG00000000022)	ptdss1a (ENSPFOG00000000089)	ENSPFOG00000000103	ENSPFOG00000000107	PLEKHG4B (ENSPFOG00000000113)	NKD2 (ENSPFOG00000000143)	trip13 (ENSPFOG00000000149)	brd9 (ENSPFOG00000000175) ##22	ZDHHC11 (ENSPFOG00000000214)	TPPP (ENSPFOG00000000218)	cep72 (ENSPFOG00000000223)	ENSPFOG00000000260	ccdc12 (ENSPFOG00000000343)	NBEAL2 (ENSPFOG00000000413)	ENSPFOG00000001424	ENSPFOG00000001574	rbm12bb (ENSPFOG00000020937)	upp1 (ENSPFOG00000001783)	ENSPFOG00000001865	HEY1 (ENSPFOG00000001913)	ENSPFOG00000001960	fam8a1b (ENSPFOG00000002044)	ATXN1 (ENSPFOG00000002088)
Guppy	MODERN SPECIES	446	NPY (ENSPREG00000000877)	malsu1 (ENSPREG00000000845)	smpd5 (ENSPREG00000000831)	SPATC1L (ENSPREG00000000809) #19	grinab (ENSPREG00000000785)	rbm24b (ENSPREG00000000762)	KIF13A (ENSPREG00000000618)	NHLRC1 (ENSPREG00000021217)	ptdss1a (ENSPREG00000021194)	ENSPREG00000021176	ENSPREG00000021165	ENSPREG00000021149	ENSPREG00000021129	NKD2 (ENSPREG00000021114)	trip13 (ENSPREG00000021092)	brd9 (ENSPREG00000021066) ##22	ENSPREG00000021055	ZDHHC11 (ENSPREG00000021041)	TPPP (ENSPREG00000021012)	cep72 (ENSPREG00000020970)	ENSPREG00000020949	ccdc12 (ENSPREG00000020932)	NBEAL2 (ENSPREG00000020859)	ENSPREG00000020818	ENSPREG00000020789	rbm12bb (ENSPREG00000020770)	ENSPREG00000020761	upp1 (ENSPREG00000020627)	ENSPREG00000020496	HEY1 (ENSPREG00000020452)	fabp4b (ENSPREG00000020345)
Platyfish	MODERN SPECIES	17	gsdmeb (ENSXMAG00000027581)	pals2a (ENSXMAG00000013971)	NPY (ENSXMAG00000013995)	malsu1 (ENSXMAG00000024134)	smpd5 (ENSXMAG00000013998)	grinab (ENSXMAG00000014007)	rbm24b (ENSXMAG00000014017)	KIF13A (ENSXMAG00000014021)	NHLRC1 (ENSXMAG00000019788)	ptdss1a (ENSXMAG00000014041)	ENSXMAG00000026158	ENSXMAG00000014048	PLEKHG4B (ENSXMAG00000014049)	NKD2 (ENSXMAG00000014060)	trip13 (ENSXMAG00000014062)	brd9 (ENSXMAG00000014068) ##22	ZDHHC11 (ENSXMAG00000014082)	TPPP (ENSXMAG00000014084)	cep72 (ENSXMAG00000025761)	ENSXMAG00000014088	ccdc12 (ENSXMAG00000014098)	NBEAL2 (ENSXMAG00000014112)	ENSXMAG00000029012	ENSXMAG00000014202	rbm12bb (ENSXMAG00000014213)	ENSXMAG00000021038	upp1 (ENSXMAG00000014219)	ENSXMAG00000025692	HEY1 (ENSXMAG00000014241)	ENSXMAG00000014247	fam8a1b (ENSXMAG00000026154)
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d
Pomacentridae	ANCESTRAL SPECIES	18	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Pomacentridae_A	ANCESTRAL SPECIES	5	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Clown anemonefish	MODERN SPECIES	1281		pals2a (ENSAOCG00000023688)	NPY (ENSAOCG00000023697)	malsu1 (ENSAOCG00000023703)	smpd5 (ENSAOCG00000001729)	ENSAOCG00000023727 #19	grinab (ENSAOCG00000023755)	rbm24b (ENSAOCG00000023764)	KIF13A (ENSAOCG00000023831)	NHLRC1 (ENSAOCG00000023848)	ptdss1a (ENSAOCG00000001746)	ENSAOCG00000023864	PLEKHG4B (ENSAOCG00000023913)	NKD2 (ENSAOCG00000002255)	trip13 (ENSAOCG00000023950)	brd9 (ENSAOCG00000023980) ##22	ZDHHC11 (ENSAOCG00000023992)	TPPP (ENSAOCG00000001755)	cep72 (ENSAOCG00000024022)	ENSAOCG00000024053	ENSAOCG00000024071	ccdc12 (ENSAOCG00000024127)	NBEAL2 (ENSAOCG00000024229)	ENSAOCG00000024239	ENSAOCG00000024246	ENSAOCG00000024264	rbm12bb (ENSAOCG00000024270)	ENSAOCG00000024277	upp1 (ENSAOCG00000001766)	stmn2b (ENSAOCG00000024287)	HEY1 (ENSAOCG00000024291)
Orange clownfish	MODERN SPECIES	21	malsu1 (ENSAPEG00000010156)	smpd5 (ENSAPEG00000010110)	ENSAPEG00000010088 #19	grinab (ENSAPEG00000010079)	rbm24b (ENSAPEG00000010059)	KIF13A (ENSAPEG00000009881)	NHLRC1 (ENSAPEG00000009853)	ptdss1a (ENSAPEG00000009806)	ENSAPEG00000009652	ENSAPEG00000009624	ENSAPEG00000009609	ENSAPEG00000009550	ENSAPEG00000009480	NKD2 (ENSAPEG00000009449)	trip13 (ENSAPEG00000009408)	brd9 (ENSAPEG00000009341) ##22	ZDHHC11 (ENSAPEG00000009328)	TPPP (ENSAPEG00000009303)	cep72 (ENSAPEG00000009287)	ENSAPEG00000009269	ENSAPEG00000009194	ccdc12 (ENSAPEG00000009155)	NBEAL2 (ENSAPEG00000008943)	cndp1 (ENSAPEG00000008715)	ABHD5 (ENSAPEG00000008693)	ano10a (ENSAPEG00000008649)	ano10a (ENSAPEG00000008600)	snrka (ENSAPEG00000008556)	pomgnt2 (ENSAPEG00000008541)	ENSAPEG00000008504	GASK1A (ENSAPEG00000008462)
Spiny chromis	MODERN SPECIES	842															trip13 (ENSAPOG00000014655)	brd9 (ENSAPOG00000014586) ##22	ZDHHC11 (ENSAPOG00000014488)	TPPP (ENSAPOG00000014473)	cep72 (ENSAPOG00000014459)	ENSAPOG00000014444	ccdc12 (ENSAPOG00000014426)	NBEAL2 (ENSAPOG00000014411)	ENSAPOG00000014002	ENSAPOG00000013993	rbm12bb (ENSAPOG00000013963)	ENSAPOG00000013958	upp1 (ENSAPOG00000013935)	stmn2b (ENSAPOG00000013898)	HEY1 (ENSAPOG00000013854)	fabp4b (ENSAPOG00000013816)	fam8a1b (ENSAPOG00000013806)
Bicolor damselfish	MODERN SPECIES	649				malsu1 (ENSSPAG00000008013)	smpd5 (ENSSPAG00000007973)	ENSSPAG00000007965 #19	grinab (ENSSPAG00000007956)	rbm24b (ENSSPAG00000007941)	KIF13A (ENSSPAG00000007647)	ptdss1a (ENSSPAG00000007563)	ENSSPAG00000007550	PLEKHG4B (ENSSPAG00000007463)	NKD2 (ENSSPAG00000007433)	ENSSPAG00000007423	trip13 (ENSSPAG00000007373)	brd9 (ENSSPAG00000007283) ##22	ZDHHC11 (ENSSPAG00000007247)	TPPP (ENSSPAG00000007229)	cep72 (ENSSPAG00000007200)	ENSSPAG00000007176	ENSSPAG00000007135	ccdc12 (ENSSPAG00000007010)	NBEAL2 (ENSSPAG00000006857)	ENSSPAG00000006826	SETD2 (ENSSPAG00000006781)	rbm12bb (ENSSPAG00000006774)	ENSSPAG00000006765	upp1 (ENSSPAG00000006744)	stmn2b (ENSSPAG00000006722)	HEY1 (ENSSPAG00000006710)
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619.i	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000158322.i	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619.i	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000158322.i.g	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d	ENSGT00940000164547.b.b
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT00940000155880.e	ENSGT00940000158500	ENSGT00940000156475.e	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT01030000234813	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619.i	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000158322.i.g	ENSGT01100000263527.b.b.a.a.b.k.b.a.a.b.a.b.a.b.a.a.a.a	ENSGT00940000171520	ENSGT00940000157781	ENSGT01030000234597.a.b.b.e.b.e	ENSGT00940000157068.d
Zebra mbuna	MODERN SPECIES	1093	OSBPL3 (ENSMZEG00005014261)	gsdmeb (ENSMZEG00005014321)	pals2a (ENSMZEG00005014339)	NPY (ENSMZEG00005014357)	malsu1 (ENSMZEG00005014364)	smpd5 (ENSMZEG00005014373)	grinab (ENSMZEG00005014384)	rbm24b (ENSMZEG00005014397)	KIF13A (ENSMZEG00005014421)	NHLRC1 (ENSMZEG00005014501)	ptdss1a (ENSMZEG00005014508)	ENSMZEG00005014520	PLEKHG4B (ENSMZEG00005014538)	NKD2 (ENSMZEG00005014585)	trip13 (ENSMZEG00005014596)	brd9 (ENSMZEG00005014614) ##22	ZDHHC11 (ENSMZEG00005014663)	TPPP (ENSMZEG00005014673)	cep72 (ENSMZEG00005014688)	ENSMZEG00005014698	ENSMZEG00005014704	ccdc12 (ENSMZEG00005014728)	NBEAL2 (ENSMZEG00005014755)	ENSMZEG00005014787	SETD2 (ENSMZEG00005014801)	rbm12bb (ENSMZEG00005014845)	rbm12bb (ENSMZEG00005015005)	ENSMZEG00005015008	ENSMZEG00005015013	upp1 (ENSMZEG00005015019)	ENSMZEG00005015026
Eastern happy	MODERN SPECIES	2	OSBPL3 (ENSACLG00000003972)	gsdmeb (ENSACLG00000004038)	pals2a (ENSACLG00000004049)	NPY (ENSACLG00000004109)	malsu1 (ENSACLG00000004127)	smpd5 (ENSACLG00000004150)	ENSACLG00000004205 #19	grinab (ENSACLG00000004199)	rbm24b (ENSACLG00000004207)	KIF13A (ENSACLG00000004242)	ptdss1a (ENSACLG00000004615)	ENSACLG00000004670	PLEKHG4B (ENSACLG00000004690)	NKD2 (ENSACLG00000004812)	trip13 (ENSACLG00000004857)	brd9 (ENSACLG00000004894) ##22	ZDHHC11 (ENSACLG00000004950)	TPPP (ENSACLG00000005266)	cep72 (ENSACLG00000005271)	ENSACLG00000005298	ENSACLG00000005320	ccdc12 (ENSACLG00000005356)	NBEAL2 (ENSACLG00000005387)	ENSACLG00000005483	SETD2 (ENSACLG00000005502)	rbm12bb (ENSACLG00000005575)	rbm12bb (ENSACLG00000005578)	ENSACLG00000005593	ENSACLG00000005606	upp1 (ENSACLG00000005619)	ENSACLG00000005632
P. nyererei	MODERN SPECIES	379	gsdmeb (ENSPNYG00000015572)	pals2a (ENSPNYG00000015586)	NPY (ENSPNYG00000015619)	malsu1 (ENSPNYG00000015636)	smpd5 (ENSPNYG00000015647)	grinab (ENSPNYG00000015673)	rbm24b (ENSPNYG00000015684)	KIF13A (ENSPNYG00000015713)	NHLRC1 (ENSPNYG00000015838)	ptdss1a (ENSPNYG00000015856)	ENSPNYG00000015876	ENSPNYG00000015902	ENSPNYG00000015936	NKD2 (ENSPNYG00000015990)	trip13 (ENSPNYG00000016053)	brd9 (ENSPNYG00000016086) ##22	ZDHHC11 (ENSPNYG00000016132)	TPPP (ENSPNYG00000016180)	cep72 (ENSPNYG00000016195)	ENSPNYG00000016206	ENSPNYG00000016228	ccdc12 (ENSPNYG00000016295)	NBEAL2 (ENSPNYG00000016370)	ENSPNYG00000016586	SETD2 (ENSPNYG00000016617)	rbm12bb (ENSPNYG00000016696)	ENSPNYG00000016714	upp1 (ENSPNYG00000016759)	ENSPNYG00000016836	HEY1 (ENSPNYG00000016854)	fabp4b (ENSPNYG00000016885)
Burton s mouthbrooder	MODERN SPECIES	444	gsdmeb (ENSHBUG00000017333)	pals2a (ENSHBUG00000017314)	NPY (ENSHBUG00000017245)	malsu1 (ENSHBUG00000017223)	smpd5 (ENSHBUG00000017212)	ENSHBUG00000017161 #19	grinab (ENSHBUG00000017176)	rbm24b (ENSHBUG00000017155)	KIF13A (ENSHBUG00000017129)	NHLRC1 (ENSHBUG00000000965)	ptdss1a (ENSHBUG00000016879)	ENSHBUG00000016856	PLEKHG4B (ENSHBUG00000016836)	NKD2 (ENSHBUG00000016784)	trip13 (ENSHBUG00000000496)	brd9 (ENSHBUG00000016700) ##22	ZDHHC11 (ENSHBUG00000016526)	TPPP (ENSHBUG00000016514)	cep72 (ENSHBUG00000016499)	ENSHBUG00000016487	ENSHBUG00000016471	ccdc12 (ENSHBUG00000016447)	NBEAL2 (ENSHBUG00000016383)	ENSHBUG00000016311	SETD2 (ENSHBUG00000016287)	rbm12bb (ENSHBUG00000016227)	ENSHBUG00000016213	upp1 (ENSHBUG00000016196)	ENSHBUG00000016187	HEY1 (ENSHBUG00000016143)	fabp4b (ENSHBUG00000016114)
Lyretail cichlid	MODERN SPECIES	369	gsdmeb (ENSNBRG00000015972)	pals2a (ENSNBRG00000015927)	NPY (ENSNBRG00000015897)	malsu1 (ENSNBRG00000015892)	smpd5 (ENSNBRG00000015871)	grinab (ENSNBRG00000015861)	rbm24b (ENSNBRG00000015853)	KIF13A (ENSNBRG00000015667)	NHLRC1 (ENSNBRG00000015620)	ptdss1a (ENSNBRG00000015557)	ENSNBRG00000015534	ENSNBRG00000015525	ENSNBRG00000015509	NKD2 (ENSNBRG00000015488)	trip13 (ENSNBRG00000015459)	brd9 (ENSNBRG00000015416) ##22	ZDHHC11 (ENSNBRG00000015393)	TPPP (ENSNBRG00000015377)	cep72 (ENSNBRG00000015333)	ENSNBRG00000015290	ccdc12 (ENSNBRG00000015275)	NBEAL2 (ENSNBRG00000015161)	ENSNBRG00000015101	ENSNBRG00000015062	rbm12bb (ENSNBRG00000015057)	ENSNBRG00000015041	upp1 (ENSNBRG00000015020)	ENSNBRG00000015005	HEY1 (ENSNBRG00000014983)	fabp4b (ENSNBRG00000014819)	fam8a1b (ENSNBRG00000014794)
Nile tilapia	MODERN SPECIES	2	pals2a (ENSONIG00000002990)	NPY (ENSONIG00000042290)	malsu1 (ENSONIG00000029934)	smpd5 (ENSONIG00000003005)	ENSONIG00000030921 #19	grinab (ENSONIG00000003008)	rbm24b (ENSONIG00000003010)	KIF13A (ENSONIG00000003013)	NHLRC1 (ENSONIG00000020611)	ptdss1a (ENSONIG00000003024)	ENSONIG00000030675	PLEKHG4B (ENSONIG00000003030)	NKD2 (ENSONIG00000039702)	trip13 (ENSONIG00000003038)	ENSONIG00000027278	brd9 (ENSONIG00000003047) ##22	ZDHHC11 (ENSONIG00000003052)	TPPP (ENSONIG00000003055)	cep72 (ENSONIG00000003056)	ENSONIG00000035211	ENSONIG00000003057	ccdc12 (ENSONIG00000003061)	NBEAL2 (ENSONIG00000003066)	ENSONIG00000003075	ENSONIG00000003077	rbm12bb (ENSONIG00000020612)	ENSONIG00000030894	upp1 (ENSONIG00000003081)	ENSONIG00000003084	HEY1 (ENSONIG00000003087)	fabp4b (ENSONIG00000003090)
Midas cichlid	MODERN SPECIES	303	pals2a (ENSACIG00000015789)	NPY (ENSACIG00000015781)	malsu1 (ENSACIG00000015753)	smpd5 (ENSACIG00000015732)	ENSACIG00000015718 #19	grinab (ENSACIG00000015664)	rbm24b (ENSACIG00000015650)	KIF13A (ENSACIG00000015562)	NHLRC1 (ENSACIG00000015547)	ptdss1a (ENSACIG00000015524)	ENSACIG00000015506	ENSACIG00000015468	ENSACIG00000015454	NKD2 (ENSACIG00000015434)	trip13 (ENSACIG00000015405)	brd9 (ENSACIG00000015367) ##22	ZDHHC11 (ENSACIG00000015349)	TPPP (ENSACIG00000015296)	cep72 (ENSACIG00000015247)	ENSACIG00000015204	ccdc12 (ENSACIG00000015192)	NBEAL2 (ENSACIG00000015072)	ENSACIG00000015029	ENSACIG00000014991	rbm12bb (ENSACIG00000014943)	upp1 (ENSACIG00000014925)	ENSACIG00000014909	HEY1 (ENSACIG00000014891)	ENSACIG00000014715	fam8a1b (ENSACIG00000014675)	ATXN1 (ENSACIG00000014661)
Tiger tail seahorse	MODERN SPECIES	215											ptdss1a (ENSHCOG00000015626)	ENSHCOG00000015596	ENSHCOG00000015554	NKD2 (ENSHCOG00000015519)	trip13 (ENSHCOG00000015514)	brd9 (ENSHCOG00000015507) ##22	ZDHHC11 (ENSHCOG00000015433)	TPPP (ENSHCOG00000015335)	cep72 (ENSHCOG00000015216)	ENSHCOG00000015197	ccdc12 (ENSHCOG00000015164)	NBEAL2 (ENSHCOG00000000417)	ENSHCOG00000015022	ENSHCOG00000014975	rbm12bb (ENSHCOG00000014952)	ENSHCOG00000014946	upp1 (ENSHCOG00000014928)	stmn2b (ENSHCOG00000014905)	HEY1 (ENSHCOG00000014864)	fabp4b (ENSHCOG00000014846)	fam8a1b (ENSHCOG00000014840)
Pinecone sodierfish	MODERN SPECIES	7	pals2a (ENSMMDG00005019994)	NPY (ENSMMDG00005020218)	malsu1 (ENSMMDG00005020221)	smpd5 (ENSMMDG00005020224)	ENSMMDG00005020230 #19	GRINA (ENSMMDG00005020237)	rbm24b (ENSMMDG00005020289)	KIF13A (ENSMMDG00005020301)	ENSMMDG00005020314	ptdss1a (ENSMMDG00005020319)	ENSMMDG00005020332	PLEKHG4B (ENSMMDG00005020334)	ENSMMDG00005020336	NKD2 (ENSMMDG00005020337)	trip13 (ENSMMDG00005020355)	brd9 (ENSMMDG00005020955) ##22	ZDHHC11 (ENSMMDG00005020962)	TPPP (ENSMMDG00005020966)	cep72 (ENSMMDG00005020970)	ENSMMDG00005020971	ccdc12 (ENSMMDG00005020976)	NBEAL2 (ENSMMDG00005020988)	ENSMMDG00005021168	ENSMMDG00005021187	rbm12bb (ENSMMDG00005021653)	ENSMMDG00005021654	upp1 (ENSMMDG00005021655)	ENSMMDG00005021662	HEY1 (ENSMMDG00005021781)	fabp4b (ENSMMDG00005021784)	fam8a1b (ENSMMDG00005021785)
Cod	MODERN SPECIES	2	ENSGMOG00000028684	ENSGMOG00000027737	pals2a (ENSGMOG00000006971)	ENSGMOG00000022354	smpd5 (ENSGMOG00000006983)	ENSGMOG00000024078	ENSGMOG00000007004 #19	rbm24b (ENSGMOG00000007015)	ENSGMOG00000007020	ENSGMOG00000007047	ptdss1a (ENSGMOG00000007049)	ENSGMOG00000022717	ENSGMOG00000016704	NKD2 (ENSGMOG00000016781)	trip13 (ENSGMOG00000016804)	brd9 (ENSGMOG00000016825) ##22	TPPP (ENSGMOG00000016851)	cep72 (ENSGMOG00000016859)	ENSGMOG00000033139	ENSGMOG00000016879	ccdc12 (ENSGMOG00000023417)	ENSGMOG00000016913	ENSGMOG00000035402	ENSGMOG00000017002	ENSGMOG00000035453	rbm12bb (ENSGMOG00000036421)	ENSGMOG00000031146	upp1 (ENSGMOG00000013475)	ENSGMOG00000023835	ENSGMOG00000036639	ENSGMOG00000033471
Protacanthopterygii	ANCESTRAL SPECIES	1	ENSGT00940000156475.e	ENSGT00390000007287	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508.m.a	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.r	ENSGT00940000162507.A.q	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a	ENSGT00980000199423.b.b	ENSGT00390000005939.a.a.b	ENSGT00940000156595
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	2	ENSGT00520000055666.b.i #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508.m.a.a	ENSGT00730000111361.a.a	ENSGT00940000157508.m.a.b	ENSGT00730000111361.b	ENSGT00990000203917	ENSGT00730000111361.a.b	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.r.a	ENSGT00940000162507.A.q	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.c ##22	ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.b	ENSGT00940000154022.a.b.a	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a	ENSGT00980000199423.b.b.c.a
Salmoninae_a	ANCESTRAL SPECIES	53	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b.i #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508.m.a.a	ENSGT00730000111361.a.a	ENSGT00940000157508.m.a.b	ENSGT00730000111361.b	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.r.a.a.a	ENSGT00940000162507.A.q	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.c ##22	ENSGT00940000161608.t	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b.a	ENSGT00390000011619.e	ENSGT00940000177026	ENSGT00940000154022.a.b.b	ENSGT00390000011619.f	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000166800	ENSGT00940000160086	ENSGT00940000158322.i	ENSGT01030000235080.d.a
Salmo	ANCESTRAL SPECIES	119													ENSGT00940000162507.A.q	ENSGT00440000033589.d.a.c	ENSGT00390000017432.c	ENSGT00950000183170.b.a.c ##22	ENSGT00940000161608.s	ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608.t	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b.a	ENSGT00390000011619.f	ENSGT00940000158454.h	ENSGT00940000154022.a.b.b	ENSGT00390000011619.e	ENSGT00940000158454.g	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000166800	ENSGT00940000158322.i.a
Atlantic salmon	MODERN SPECIES	935																ENSSSAG00000010397 ##22	ENSSSAG00000092284
River trout	MODERN SPECIES	420	ENSSTUG00000037075	NKD2 (ENSSTUG00000037110)	trip13 (ENSSTUG00000037185)	brd9 (ENSSTUG00000037318) ##22	ENSSTUG00000037380	ENSSTUG00000037392	TPPP (ENSSTUG00000037396)	cep72 (ENSSTUG00000037411)	ENSSTUG00000037427	ccdc12 (ENSSTUG00000037458)	ENSSTUG00000037483	ENSSTUG00000037496	ENSSTUG00000037527	NKD2 (ENSSTUG00000026481)	trip13 (ENSSTUG00000026503)	brd9 (ENSSTUG00000026595) ##22	ENSSTUG00000026752	TPPP (ENSSTUG00000026771)	cep72 (ENSSTUG00000026779)	ENSSTUG00000026795	ccdc12 (ENSSTUG00000026813)	NBEAL2 (ENSSTUG00000026878)	ENSSTUG00000029916	ENSSTUG00000029993	ENSSTUG00000031991	rbm12bb (ENSSTUG00000032006)	ENSSTUG00000032010	ENSSTUG00000032021	upp1 (ENSSTUG00000032032)	ENSSTUG00000032047	ENSSTUG00000032056
Oncorhynchus	ANCESTRAL SPECIES	50	ENSGT00940000156475.e	ENSGT00390000007287.`b	ENSGT00390000007287.ab	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b.i #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508.m.a.a	ENSGT00730000111361.a.a	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.q	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.c ##22	ENSGT00940000161608.s	ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608.t	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.b	ENSGT00390000011619.f	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT01030000235080.d.a	ENSGT00940000157781.o
Oncorhynchus_a	ANCESTRAL SPECIES	245									ENSGT00990000203917	ENSGT00730000111361.a.b	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.r.a.a.a	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.c ##22	ENSGT00940000161608.s
Coho salmon	MODERN SPECIES	1443													NKD2 (ENSOKIG00005028282)	ENSOKIG00005028278	ENSOKIG00005028263	brd9 (ENSOKIG00005027877) ##22	ENSOKIG00005027839
Chinook salmon	MODERN SPECIES	694															trip13 (ENSOTSG00005040014)	brd9 (ENSOTSG00005040012) ##22	ZDHHC11 (ENSOTSG00005040009)	ENSOTSG00005040007
Rainbow trout	MODERN SPECIES	11	NPY (ENSOMYG00000001366)	ENSOMYG00000002328	ENSOMYG00000001276	smpd5 (ENSOMYG00000002268)	ENSOMYG00000048862 #19	grinab (ENSOMYG00000028799)	rbm24b (ENSOMYG00000076130)	ENSOMYG00000069470	ENSOMYG00000028715	ptdss1a (ENSOMYG00000060521)	si:ch211-269k10.5 (ENSOMYG00000025516)	ENSOMYG00000053570	NKD2 (ENSOMYG00000060723)	ENSOMYG00000065165	trip13 (ENSOMYG00000028291)	brd9 (ENSOMYG00000027662) ##22	ENSOMYG00000051945	TPPP (ENSOMYG00000038511)	cep72 (ENSOMYG00000027538)	ENSOMYG00000072027	ENSOMYG00000027509	ccdc12 (ENSOMYG00000027441)	ENSOMYG00000048052	ENSOMYG00000070528	ENSOMYG00000026848	ENSOMYG00000052814	ENSOMYG00000027118	rbm12bb (ENSOMYG00000047903)	ENSOMYG00000026660	upp1 (ENSOMYG00000026559)	ENSOMYG00000055220
Salmoninae	ANCESTRAL SPECIES	2	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508.m.a.a	ENSGT00730000111361.a.a	ENSGT00940000157508.m.a.b	ENSGT00730000111361.b	ENSGT00990000203917	ENSGT00730000111361.a.b	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.r.a	ENSGT00940000162507.A.q	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.c ##22	ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.b	ENSGT00940000154022.a.b.a	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000157068.d	ENSGT00940000164547.b.b	ENSGT00390000007346.a	ENSGT00980000199423.b.b.c.a	ENSGT00390000005939.a.a.b
Huchen	MODERN SPECIES	4559															ENSHHUG00000040264	brd9 (ENSHHUG00000040158) ##22	ENSHHUG00000040145	ENSHHUG00000040141
Salmoninae_a	ANCESTRAL SPECIES	544																ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608.s
Salmo	ANCESTRAL SPECIES	119											ENSGT00940000162507.A.q	ENSGT00440000033589.d.a.c	ENSGT00390000017432.c	ENSGT00950000183170.b.a.c ##22	ENSGT00940000161608.s	ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608.t	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b.a	ENSGT00390000011619.f	ENSGT00940000158454.h	ENSGT00940000154022.a.b.b	ENSGT00390000011619.e	ENSGT00940000158454.g	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000166800	ENSGT00940000158322.i.a	ENSGT00940000160086	ENSGT00940000158322.i.b
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	24	STK31 (ENSSSAG00000055913)	ENSSSAG00000015845	smpd5 (ENSSSAG00000015828)	ENSSSAG00000100309 #19	grinab (ENSSSAG00000113876)	ENSSSAG00000102177	rbm24b (ENSSSAG00000111002)	ENSSSAG00000091873	ENSSSAG00000117981	ptdss1a (ENSSSAG00000094146)	si:ch211-269k10.5 (ENSSSAG00000012569)	ENSSSAG00000009661	NKD2 (ENSSSAG00000098733)	ENSSSAG00000086562	trip13 (ENSSSAG00000096138)	brd9 (ENSSSAG00000044106) ##22	ENSSSAG00000081814	TPPP (ENSSSAG00000083648)	cep72 (ENSSSAG00000095938)	ENSSSAG00000113946	ccdc12 (ENSSSAG00000116467)	ENSSSAG00000112763	ENSSSAG00000094925	ENSSSAG00000111909	rbm12bb (ENSSSAG00000019789)	upp1 (ENSSSAG00000094535)	ENSSSAG00000096200	ENSSSAG00000086750	ENSSSAG00000090633	ENSSSAG00000012719	fabp4 (ENSSSAG00000058511)
Atlantic salmon	MODERN SPECIES	11	PALS2 (ENSSSAG00000121190)	NPY (ENSSSAG00000087886)	STK31 (ENSSSAG00000111147)	smpd5 (ENSSSAG00000082040)	ENSSSAG00000100788 #19	ENSSSAG00000088915	rbm24b (ENSSSAG00000084113)	ENSSSAG00000120990	ENSSSAG00000121148	ptdss1a (ENSSSAG00000096464)	si:ch211-269k10.5 (ENSSSAG00000038185)	ENSSSAG00000117673	ENSSSAG00000091693	NKD2 (ENSSSAG00000099439)	trip13 (ENSSSAG00000092196)	brd9 (ENSSSAG00000096040) ##22	ENSSSAG00000091308	cep72 (ENSSSAG00000045030)	TPPP (ENSSSAG00000099897)	ENSSSAG00000039963	ccd12 (ENSSSAG00000002917)	ENSSSAG00000094834	NBEAL2 (ENSSSAG00000083220)	ENSSSAG00000114860	SETD2 (ENSSSAG00000114693)	rbm12bb (ENSSSAG00000102527)	ENSSSAG00000060432	ENSSSAG00000087003	ENSSSAG00000008684	ENSSSAG00000090598	ENSSSAG00000055031
River trout	MODERN SPECIES	420	ENSSTUG00000036626	SLA (ENSSTUG00000036688)	ENSSTUG00000036704	SLA (ENSSTUG00000036723)	ccn4b (ENSSTUG00000036754)	ENSSTUG00000036760	PLEKHG4B (ENSSTUG00000036767)	si:ch211-269k10.5 (ENSSTUG00000036785)	ptdss1a (ENSSTUG00000036808)	ptdss1a (ENSSTUG00000036913)	si:ch211-269k10.5 (ENSSTUG00000037010)	ENSSTUG00000037037	ENSSTUG00000037075	NKD2 (ENSSTUG00000037110)	trip13 (ENSSTUG00000037185)	brd9 (ENSSTUG00000037318) ##22	ENSSTUG00000037380	ENSSTUG00000037392	TPPP (ENSSTUG00000037396)	cep72 (ENSSTUG00000037411)	ENSSTUG00000037427	ccdc12 (ENSSTUG00000037458)	ENSSTUG00000037483	ENSSTUG00000037496	ENSSTUG00000037527	NKD2 (ENSSTUG00000026481)	trip13 (ENSSTUG00000026503)	brd9 (ENSSTUG00000026595) ##22	ENSSTUG00000026752	TPPP (ENSSTUG00000026771)	cep72 (ENSSTUG00000026779)
Oncorhynchus	ANCESTRAL SPECIES	50	ENSGT00390000007287.ab	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b.i #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508.m.a.a	ENSGT00730000111361.a.a	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A.q	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.c ##22	ENSGT00940000161608.s	ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608.t	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000177026	ENSGT00940000154022.a.b.b	ENSGT00390000011619.f	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT01030000235080.d.a	ENSGT00940000157781.o	ENSGT01030000234597.a.b.b.e.b.h	ENSGT00990000210801.a
Oncorhynchus_a	ANCESTRAL SPECIES	179																ENSGT00950000183170.b.a.d ##22	ENSGT00940000161608.t	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b.a	ENSGT00390000011619.e	ENSGT00940000154022.a.b.b	ENSGT00390000011619.f	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000160086	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT01030000235080.d.a	ENSGT00940000157781.p
Coho salmon	MODERN SPECIES	31	NPY (ENSOKIG00005050696)	STK31 (ENSOKIG00005050702)	MALSU1 (ENSOKIG00005050714)	smpd5 (ENSOKIG00005050716)	grinab (ENSOKIG00005050721)	rbm24b (ENSOKIG00005050724)	ENSOKIG00005050726	KIF13A (ENSOKIG00005050739)	NHLRC1 (ENSOKIG00005050751)	ptdss1a (ENSOKIG00005039134)	si:ch211-269k10.5 (ENSOKIG00005039999)	PLEKHG4B (ENSOKIG00005040017)	NKD2 (ENSOKIG00005040040)	trip13 (ENSOKIG00005040062)	ENSOKIG00005040200	brd9 (ENSOKIG00005040235) ##22	ENSOKIG00005040465	TPPP (ENSOKIG00005040533)	cep72 (ENSOKIG00005040542)	ENSOKIG00005040568	ccdc12 (ENSOKIG00005040713)	NBEAL2 (ENSOKIG00005041097)	ENSOKIG00005044494	ENSOKIG00005044507	ENSOKIG00005044572	rbm12bb (ENSOKIG00005044584)	upp1 (ENSOKIG00005044591)	ENSOKIG00005044596	ENSOKIG00005044600	HEY1 (ENSOKIG00005044609)	fam8a1b (ENSOKIG00005044628)
Northern pike	MODERN SPECIES	19	pals2a (ENSELUG00000000093)	NPY (ENSELUG00000003034)	ENSELUG00000003021	malsu1 (ENSELUG00000003006)	smpd5 (ENSELUG00000002998)	ENSELUG00000002987 #19	grinab (ENSELUG00000002976)	rbm24b (ENSELUG00000002970)	KIF13A (ENSELUG00000002961)	NHLRC1 (ENSELUG00000002945)	ptdss1a (ENSELUG00000002937)	si:ch211-269k10.5 (ENSELUG00000002924)	PLEKHG4B (ENSELUG00000024554)	NKD2 (ENSELUG00000024506)	trip13 (ENSELUG00000024483)	brd9 (ENSELUG00000001641) ##22	ZDHHC11 (ENSELUG00000024355)	TPPP (ENSELUG00000001024)	cep72 (ENSELUG00000024312)	ENSELUG00000024248	ENSELUG00000024217	ccdc12 (ENSELUG00000024105)	NBEAL2 (ENSELUG00000024064)	ENSELUG00000023913	ENSELUG00000023872	rbm12bb (ENSELUG00000027827)	ENSELUG00000026417	upp1 (ENSELUG00000032459)	ENSELUG00000023837	upp1 (ENSELUG00000023824)	ENSELUG00000023818
Otomorpha	ANCESTRAL SPECIES	80	ENSGT00940000156475.e	ENSGT00390000007287	ENSGT00390000015035	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000013853.c	ENSGT00390000004263.a.d.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154181.b.a	ENSGT00940000153446.a.a.w.a	ENSGT00940000158008	ENSGT00390000012138.a.b.c.b	ENSGT00390000017478	ENSGT00940000159321
Clupeiformes	ANCESTRAL SPECIES		ENSGT00390000001745.a	ENSGT00940000159873	ENSGT00940000165779	ENSGT00940000156904.a.b	ENSGT00940000158047	ENSGT00940000159733	ENSGT00560000077232.A.a.e	ENSGT00940000154370.d	ENSGT00940000161757	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000013853.c	ENSGT00390000004263.a.d.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154181.b.a	ENSGT00940000153446.a.a.w.a	ENSGT00940000158008	ENSGT00390000012138.a.b.c.b	ENSGT00420000029792.qb.a.m	ENSGT00390000017478
Atlantic herring	MODERN SPECIES	2	cldc1 (ENSCHAG00000012236)	COPS7B (ENSCHAG00000012242)	si:ch211-154o6.3 (ENSCHAG00000012282)	znf384b (ENSCHAG00000012394)	gnl1 (ENSCHAG00000012412)	DDR1 (ENSCHAG00000013117)	flot1b (ENSCHAG00000013354)	tubb5 (ENSCHAG00000013461)	mdc1 (ENSCHAG00000013472)	ENSCHAG00000013490	ENSCHAG00000013502	ino80e (ENSCHAG00000013535)	ENSCHAG00000013556	NKD2 (ENSCHAG00000013579)	trip13 (ENSCHAG00000013596)	brd9 (ENSCHAG00000013867) ##22	ENSCHAG00000013992	TPPP (ENSCHAG00000014017)	cep72 (ENSCHAG00000014025)	ENSCHAG00000014042	baalca (ENSCHAG00000014362)	atp6v1c1a (ENSCHAG00000014376)	azin1a (ENSCHAG00000014469)	KLF10 (ENSCHAG00000014545)	ubr5 (ENSCHAG00000014622)	ENSCHAG00000019382	LAPTM4B (ENSCHAG00000019395)	MATN2 (ENSCHAG00000019434)	rpl30 (ENSCHAG00000019698)	RIDA (ENSCHAG00000019727)	SCAP (ENSCHAG00000019766)
Denticle herring	MODERN SPECIES	15	ENSDCDG00000021910	cldc1 (ENSDCDG00000021795)	cops7a (ENSDCDG00000021779)	si:ch211-154o6.3 (ENSDCDG00000021771)	znf384b (ENSDCDG00000021761)	gnl1 (ENSDCDG00000021658)	DDR1 (ENSDCDG00000020944)	flot1b (ENSDCDG00000020926)	ENSDCDG00000020925	mdc1 (ENSDCDG00000020920)	ENSDCDG00000020917	ino80e (ENSDCDG00000020913)	ENSDCDG00000020903	NKD2 (ENSDCDG00000020899)	trip13 (ENSDCDG00000020875)	brd9 (ENSDCDG00000020853) ##22	ZDHHC11 (ENSDCDG00000020849)	TPPP (ENSDCDG00000020846)	cep72 (ENSDCDG00000020845)	ENSDCDG00000020836	baalca (ENSDCDG00000020828)	atp6v1c1a (ENSDCDG00000020808)	azin1a (ENSDCDG00000020805)	KLF10 (ENSDCDG00000020793)	ubr5 (ENSDCDG00000020743)	ENSDCDG00000020727	LAPTM4B (ENSDCDG00000020725)	MATN2 (ENSDCDG00000020717)	ENSDCDG00000020705	RIDA (ENSDCDG00000020699)	NIPAL2 (ENSDCDG00000020687)
Otophysi	ANCESTRAL SPECIES	1		ENSGT00390000004191	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000182104	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000013853.c	ENSGT00390000004263.a.d.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154450.uc	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000165457.a.a.b	ENSGT00940000159312
Cyprinoidei	ANCESTRAL SPECIES	91	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00390000004191	ENSGT00400000022168.a	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000182104	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000013853.c	ENSGT00390000004263.a.d.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154450.uc	ENSGT00940000164147.a	ENSGT00940000158669
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	280	ENSGT00390000004191	ENSGT00400000022168.a.a.a	ENSGT01050000244890.a.a.a.h.i	ENSGT00400000022168.a.b	ENSGT01050000244890.a.a.a.h.j	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a.b	ENSGT00970000193711	ENSGT00940000162507.A.f	ENSGT00940000157874.r	ENSGT00940000182104	ENSGT00940000162507.A.e.b	ENSGT00440000033589.d.a.h	ENSGT00390000017432	ENSGT00950000183170.b.a.e ##22	ENSGT00940000161608	ENSGT00940000153875.c.p	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b.a.b	ENSGT00530000063576.B.a.a.a	ENSGT00940000162507.A.e.a	ENSGT00440000033589.d.a.g	ENSGT00940000153875.c.o	ENSGT00390000003058.b.a.a.a.b.a.a	ENSGT00390000013853.c	ENSGT00390000004263.a.d.a.d	ENSGT00950000182995.e.b.ab.e	ENSGT00950000182995.e.b.ab.f	ENSGT00940000159405	ENSGT00940000156357
Goldfish	MODERN SPECIES	7	cdk14 (ENSCARG00000005144)	fzd1 (ENSCARG00000005093)	znrf2b (ENSCARG00000005084)	ggctb (ENSCARG00000005079)	SLC6A20 (ENSCARG00000004638)	sacm1lb (ENSCARG00000004524)	gpatch3 (ENSCARG00000004494)	smpd5 (ENSCARG00000004483)	grinab (ENSCARG00000004453)	grinab (ENSCARG00000004444)	grinab (ENSCARG00000004416)	KIF13A (ENSCARG00000003582)	ptdss1a (ENSCARG00000003504)	NKD2 (ENSCARG00000003490)	trip13 (ENSCARG00000003456)	brd9 (ENSCARG00000003385) ##22	ENSCARG00000003365	TPPP (ENSCARG00000003358)	cep72 (ENSCARG00000003344)	ENSCARG00000003322	atp6v1c1a (ENSCARG00000003293)	azin1a (ENSCARG00000003261)	ubr5 (ENSCARG00000003158)	SRSF10 (ENSCARG00000003126)	fabp10a (ENSCARG00000003118)	ifnlr1 (ENSCARG00000003109)	ENSCARG00000003102	MAN1C1 (ENSCARG00000003038)	rspo1 (ENSCARG00000003021)	sult2st3 (ENSCARG00000003013)	tmem147 (ENSCARG00000002992)
Cyprininae_a	ANCESTRAL SPECIES	78	ENSGT00390000004191	ENSGT00400000022168.a.a.a	ENSGT01050000244890.a.a.a.h.i	ENSGT00400000022168.a.b	ENSGT01050000244890.a.a.a.h.j.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a.b	ENSGT00970000193711	ENSGT00940000162507.A.f	ENSGT00940000157874.r	ENSGT00940000182104	ENSGT00940000162507.A.e.b	ENSGT00440000033589.d.a.h	ENSGT00390000017432.a	ENSGT00950000183170.b.a.e ##22	ENSGT00940000153875.c.p	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b.a.b	ENSGT00390000004263.a.d.a.d.a	ENSGT00950000182995.e.b.ab.e	ENSGT00940000155982.f	ENSGT00940000164147.a.b	ENSGT00940000165457.a.a.b.c.a	ENSGT00940000159312.g	ENSGT00940000156338.a.a	ENSGT00950000183056.A.a.d	ENSGT00530000067301.a	ENSGT00940000154835.C.eb.b.a.b	ENSGT00990000204292	ENSGT00950000182802.D
Common carp reference	MODERN SPECIES	47	ggctb (ENSCCRG00000055804)	ENSCCRG00000024412	sacm1lb (ENSCCRG00000053676)	gpatch3 (ENSCCRG00000021062)	smpd5 (ENSCCRG00000052837)	grinab (ENSCCRG00000027984)	grinab (ENSCCRG00000027980)	ENSCCRG00000053148	ENSCCRG00000022352	ptdss1a (ENSCCRG00000022354)	si:ch211-269k10.5 (ENSCCRG00000022362)	ENSCCRG00000055793	ENSCCRG00000082224	ENSCCRG00000070197	ENSCCRG00000018031	brd9 (ENSCCRG00000026037) ##22	ENSCCRG00000031034	trip13 (ENSCCRG00000025985)	TPPP (ENSCCRG00000056251)	ENSCCRG00000031066	atp6v1c1a (ENSCCRG00000014413)	azin1a (ENSCCRG00000073431)	ENSCCRG00000075474	ENSCCRG00000053682	ENSCCRG00000059361	ubr5 (ENSCCRG00000014666)	ENSCCRG00000070913	fabp10a (ENSCCRG00000067296)	ifnlr1 (ENSCCRG00000050228)	ENSCCRG00000082616	ENSCCRG00000010756
Golden-line barbel	MODERN SPECIES	1304									ENSSGRG00000013459	ENSSGRG00000013458	ptdss1a (ENSSGRG00000013443)	ENSSGRG00000013440	ENSSGRG00000013439	NKD2 (ENSSGRG00000013436)	trip13 (ENSSGRG00000013382)	brd9 (ENSSGRG00000013380) ##22	ENSSGRG00000013378
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a.f ##22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a.f ##22
Golden-line barbel	MODERN SPECIES	3789																brd9 (ENSSGRG00000007123) ##22
Zebrafish	MODERN SPECIES	7	NOD1 (ENSDARG00000036308)	ggctb (ENSDARG00000005085)	sacm1lb (ENSDARG00000059806)	gpatch3 (ENSDARG00000052747)	smpd5 (ENSDARG00000059811)	grinab (ENSDARG00000052746)	rbm24b (ENSDARG00000031809)	KIF13A (ENSDARG00000069594)	ptdss1a (ENSDARG00000012588)	si:ch211-269k10.5 (ENSDARG00000090473)	ENSDARG00000097847	ENSDARG00000086950	ENSDARG00000069929	nkd2b (ENSDARG00000055271)	trip13 (ENSDARG00000025043)	brd9 (ENSDARG00000017143) ##22	ZDHHC11B (ENSDARG00000076202)	TPPP (ENSDARG00000105029)	cep72 (ENSDARG00000105258)	ENSDARG00000038445	baalca (ENSDARG00000077775)	atp6v1c1a (ENSDARG00000023967)	azin1a (ENSDARG00000052789)	ubr5 (ENSDARG00000018192)	ENSDARG00000112572	fabp10a (ENSDARG00000038439)	ifnlr1 (ENSDARG00000087131)	MAN1C1 (ENSDARG00000067912)	pdcl (ENSDARG00000009480)	rpl28 (ENSDARG00000005791)	SLC9A1 (ENSDARG00000067784)
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	82	ENSGT00940000155579.a	ENSGT00390000004191	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000182104	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.g ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000004263.a.d.a.g.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154450.uc	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000174221	ENSGT00940000159312	ENSGT00940000156338.a
Channel catfish	MODERN SPECIES	15	acbd7 (ENSIPUG00000022876)	rpp38 (ENSIPUG00000022879)	nmt2 (ENSIPUG00000022886)	fam171a1 (ENSIPUG00000022898)	ENSIPUG00000022906	A33 (ENSIPUG00000022908)	ENSIPUG00000022918	TRIM35 (ENSIPUG00000022922)	ENSIPUG00000022929	ENSIPUG00000022939	sult2st3 (ENSIPUG00000022961)	sult2st3 (ENSIPUG00000022965)	tmem147 (ENSIPUG00000022971)	nkd2 (ENSIPUG00000022995)	trip13 (ENSIPUG00000023000)	brd9 (ENSIPUG00000023012) ##22	ZDHHC11 (ENSIPUG00000023031)	tppp (ENSIPUG00000023038)	cep72 (ENSIPUG00000023043)	ENSIPUG00000023047	atp6v1c1a (ENSIPUG00000023066)	azin1 (ENSIPUG00000023075)	ENSIPUG00000023087	ubr5 (ENSIPUG00000023090)	ENSIPUG00000023118	fabp10a (ENSIPUG00000023125)	myom3 (ENSIPUG00000023143)	ENSIPUG00000023167	man1c1 (ENSIPUG00000023172)	SLC9A1 (ENSIPUG00000023185)	fam110d (ENSIPUG00000023194)
Characiphysae_b	ANCESTRAL SPECIES	65	ENSGT00940000155579.a	ENSGT00390000004191	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000182104	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a.g ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000004263.a.d.a.g.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154450.uc	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000165457.a.a.b	ENSGT00940000159312	ENSGT00940000156338.a
Characoidei	ANCESTRAL SPECIES	138	ENSGT00390000011734	ENSGT00940000155579.a	ENSGT00390000004191	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT01050000244890.a.a.a.h	ENSGT00940000156245.a.a	ENSGT00940000157508	ENSGT00730000111361	ENSGT00530000063576.B.a.a	ENSGT00970000193711	ENSGT00940000182104	ENSGT00940000162507.A	ENSGT00940000157874.r	ENSGT00440000033589.d.a	ENSGT00950000183170.b.a.g ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00390000003058.b.a.a.a.b	ENSGT00390000004263.a.d.a.g.a	ENSGT00950000182995.e.b.ab	ENSGT00940000159405	ENSGT00940000156357	ENSGT00940000154450.uc	ENSGT00940000160519	ENSGT00940000164147.a	ENSGT00940000158669	ENSGT00940000165457.a.a.b	ENSGT00940000159312	ENSGT00940000156338.a
Mexicana tetra	MODERN SPECIES	177							KIF13A (ENSAMXG00000030456)	NHLRC1 (ENSAMXG00000025937)	ENSAMXG00000029520	ptdss1a (ENSAMXG00000032732)	si:ch211-269k10.5 (ENSAMXG00000037344)	ENSAMXG00000030965	ENSAMXG00000005552	ENSAMXG00000030873	NKD2 (ENSAMXG00000005529)	brd9 (ENSAMXG00000032082) ##22	ZDHHC11 (ENSAMXG00000035277)	TPPP (ENSAMXG00000020198)	cep72 (ENSAMXG00000020191)	ENSAMXG00000033442	ENSAMXG00000020159
Red-bellied piranha	MODERN SPECIES	41	IRAK3 (ENSPNAG00000008814)	b2m (ENSPNAG00000008818)	hmga2 (ENSPNAG00000001209)	msrb3 (ENSPNAG00000008842)	lemd3 (ENSPNAG00000008855)	wif1 (ENSPNAG00000008872)	ENSPNAG00000008884	tmbim4 (ENSPNAG00000008901)	grip1 (ENSPNAG00000008957)	ENSPNAG00000009018	ENSPNAG00000009037	ptdss1a (ENSPNAG00000009079)	si:ch211-269k10.5 (ENSPNAG00000001287)	ENSPNAG00000009128	NKD2 (ENSPNAG00000009145)	brd9 (ENSPNAG00000009180) ##22	ZDHHC11 (ENSPNAG00000009192)	TPPP (ENSPNAG00000009207)	cep72 (ENSPNAG00000009245)	ENSPNAG00000009282	atp6v1c1a (ENSPNAG00000009326)	azin1a (ENSPNAG00000009343)	ENSPNAG00000009366	ubr5 (ENSPNAG00000001318)	SRSF10 (ENSPNAG00000009492)	ENSPNAG00000009501	fabp10a (ENSPNAG00000009527)	ENSPNAG00000009588	ENSPNAG00000009618	ENSPNAG00000009633	ENSPNAG00000009652
Electric eel	MODERN SPECIES	219	lamtor2 (ENSEEEG00000010512)	rab25b (ENSEEEG00000010509)	rab11al (ENSEEEG00000010508)	ENSEEEG00000010507	THSD7A (ENSEEEG00000010503)	ENSEEEG00000010499	rbm24b (ENSEEEG00000010498)	KIF13A (ENSEEEG00000010491)	ENSEEEG00000010487	ptdss1a (ENSEEEG00000010482)	si:ch211-269k10.5 (ENSEEEG00000010479)	ENSEEEG00000010476	ENSEEEG00000010471	NKD2 (ENSEEEG00000010470)	trip13 (ENSEEEG00000010432)	brd9 (ENSEEEG00000010419) ##22	ENSEEEG00000010418	TPPP (ENSEEEG00000010417)	cep72 (ENSEEEG00000010413)	ENSEEEG00000010412	ENSEEEG00000010411	atp6v1c1a (ENSEEEG00000010003)	azin1a (ENSEEEG00000009972)	ENSEEEG00000009970	ubr5 (ENSEEEG00000009804)	SRSF10 (ENSEEEG00000009797)	ENSEEEG00000009796	fabp10a (ENSEEEG00000009791)	ENSEEEG00000009785	ENSEEEG00000009784	MAN1C1 (ENSEEEG00000009781)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a.h ##22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a.h ##22
Characoidei	ANCESTRAL SPECIES	538															ENSGT00390000017432	ENSGT00950000183170.b.a.h ##22
Red-bellied piranha	MODERN SPECIES	964												uncx4.1 (ENSPNAG00000007828)	ubn1 (ENSPNAG00000000494)	zgc:136472 (ENSPNAG00000000487)	trip13 (ENSPNAG00000007812)	ENSPNAG00000000473 ##22
Osteoglossiformes	ANCESTRAL SPECIES	8	ENSGT00940000159108.j	ENSGT00940000155137.a.a	ENSGT00940000155137.b	ENSGT00940000164650	ENSGT00940000158906.i	ENSGT00940000154807.a.a	ENSGT00400000022168.a	ENSGT00520000055666.b #19	ENSGT00940000156245.a.a	ENSGT00730000111361	ENSGT00530000063576.B.b	ENSGT00970000193711	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i	ENSGT00950000183176.b.f.r	ENSGT01030000235080	ENSGT00940000157781	ENSGT00390000008115	ENSGT00940000157068.d	ENSGT00940000156172.b.h
Asian bonytongue	MODERN SPECIES	9	sp8b (ENSSFOG00015026123)	SP4 (ENSSFOG00015025683)	RAPGEF5 (ENSSFOG00015000632)	ENSSFOG00015000722	SLC6A18 (ENSSFOG00015000747)	FHOD3 (ENSSFOG00015028281)	smpd5 (ENSSFOG00015000870)	ENSSFOG00015000911 #19	rbm24b (ENSSFOG00015032870)	ENSSFOG00015000940	PTDSS1 (ENSSFOG00015000952)	si:ch211-269k10.5 (ENSSFOG00015001023)	PLEKHG4B (ENSSFOG00015001043)	NKD2 (ENSSFOG00015001063)	trip13 (ENSSFOG00015001080)	brd9 (ENSSFOG00015001130) ##22	ZDHHC11 (ENSSFOG00015001207)	TPPP (ENSSFOG00015001225)	cep72 (ENSSFOG00015001247)	ENSSFOG00015001276	ccdc12 (ENSSFOG00015001307)	NBEAL2 (ENSSFOG00015001329)	ENSSFOG00015001562	ENSSFOG00015001566	rbm12bb (ENSSFOG00015001584)	ENSSFOG00015031423	ENSSFOG00015025163	upp1 (ENSSFOG00015001624)	zgc:111986 (ENSSFOG00015001630)	ENSSFOG00015001651	HEY1 (ENSSFOG00015033124)
P. kingsleyae	MODERN SPECIES	204	ENSPKIG00000020006	rapgef5b (ENSPKIG00000019981)	ENSPKIG00000019954	ENSPKIG00000019940	SLC6A18 (ENSPKIG00000019906)	FHOD3 (ENSPKIG00000019838)	smpd5 (ENSPKIG00000019783)	RBM24 (ENSPKIG00000019760)	NHLRC1 (ENSPKIG00000019753)	si:ch211-269k10.5 (ENSPKIG00000019733)	si:ch211-269k10.5 (ENSPKIG00000019714)	PTDSS1 (ENSPKIG00000019663)	PLEKHG4B (ENSPKIG00000019567)	NKD2 (ENSPKIG00000019524)	trip13 (ENSPKIG00000019468)	brd9 (ENSPKIG00000019374) ##22	ZDHHC11 (ENSPKIG00000019317)	TPPP (ENSPKIG00000019267)	cep72 (ENSPKIG00000019222)	ENSPKIG00000019166	ccdc12 (ENSPKIG00000019130)	NBEAL2 (ENSPKIG00000018965)	ENSPKIG00000018908	ENSPKIG00000018775	rbm12bb (ENSPKIG00000018719)	ENSPKIG00000018692	ENSPKIG00000018645	upp1 (ENSPKIG00000018600)	zgc:111986 (ENSPKIG00000018571)	stmn2a (ENSPKIG00000018549)	HEY1 (ENSPKIG00000018533)
Spotted gar	MODERN SPECIES	649	ENSLOCG00000008287	plekhf2 (ENSLOCG00000018337)	ENSLOCG00000018336	NDUFAF6 (ENSLOCG00000008276)	nup153 (ENSLOCG00000008267)	KIF13A (ENSLOCG00000008249)	NHLRC1 (ENSLOCG00000018335)	ptdss1a (ENSLOCG00000008222)	mterf3 (ENSLOCG00000008210)	uqcrb (ENSLOCG00000008199)	si:ch211-269k10.5 (ENSLOCG00000008189)	lrrc14b (ENSLOCG00000008169)	ENSLOCG00000008155	NKD2 (ENSLOCG00000008140)	trip13 (ENSLOCG00000008122)	brd9 (ENSLOCG00000008095) ##22	ZDHHC11 (ENSLOCG00000008072)	TPPP (ENSLOCG00000008061)	cep72 (ENSLOCG00000008048)	SLC9A3 (ENSLOCG00000008029)	ENSLOCG00000007995	edn1 (ENSLOCG00000007983)	HIVEP1 (ENSLOCG00000007963)	ADTRP (ENSLOCG00000007936)	TMEM170B (ENSLOCG00000007926)	nedd9 (ENSLOCG00000007912)	smim13 (ENSLOCG00000007898)	nfatc1 (ENSLOCG00000007875)	atp9b (ENSLOCG00000007857)	SALL3 (ENSLOCG00000007831)	TRAPPC9 (ENSLOCG00000007814)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	17	irx5b (ENSECRG00000014212)	irx3b (ENSECRG00000014188)	FTO (ENSECRG00000014153)	rpgrip1l (ENSECRG00000014042)	aktip (ENSECRG00000013950)	RBL2 (ENSECRG00000013888)	ENSECRG00000013838	ENSECRG00000013811	ENSECRG00000013793	TOX3 (ENSECRG00000013765)	sall1a (ENSECRG00000013743)	CYLD (ENSECRG00000013689)	nod2 (ENSECRG00000013650)	SNX20 (ENSECRG00000013637)	nkd1 (ENSECRG00000013561)	ENSECRG00000013516 ##22	adcy7 (ENSECRG00000013403)	tent4b (ENSECRG00000013351)	heatr3 (ENSECRG00000013321)	cnep1r1 (ENSECRG00000013276)	si:ch211-216l23.2 (ENSECRG00000013231)	ENSECRG00000013209	ZNF423 (ENSECRG00000013167)	si:ch211-212o1.2 (ENSECRG00000013114)	cbln1 (ENSECRG00000013095)	n4bp1 (ENSECRG00000013073)	siah1 (ENSECRG00000013056)	lonp2 (ENSECRG00000013033)	il34 (ENSECRG00000013016)	sf3b3 (ENSECRG00000012961)	cog4 (ENSECRG00000012849)
Reedfish	MODERN SPECIES	4	osr2 (ENSECRG00000013009)	ENSECRG00000013041	ENSECRG00000013067	FBXO43 (ENSECRG00000013102)	rida (ENSECRG00000013123)	ENSECRG00000013150	ZHX1 (ENSECRG00000013180)	smim13 (ENSECRG00000013208)	nedd9 (ENSECRG00000013229)	TMEM170B (ENSECRG00000013265)	ADTRP (ENSECRG00000013320)	HIVEP1 (ENSECRG00000013456)	edn1 (ENSECRG00000013477)	NKD2 (ENSECRG00000013488)	trip13 (ENSECRG00000013508)	brd9 (ENSECRG00000013541) ##22	ENSECRG00000013577	ZDHHC11 (ENSECRG00000013586)	ENSECRG00000013634	ENSECRG00000013704	ENSECRG00000013712	ENSECRG00000013727	ENSECRG00000013749	ENSECRG00000013813	ENSECRG00000013820	ENSECRG00000013835	ENSECRG00000013847	ENSECRG00000013856	ENSECRG00000013871	ENSECRG00000013890	ENSECRG00000013920
Sarcopterygii	ANCESTRAL SPECIES	349													ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.C	ENSGT00940000162507.A	ENSGT01030000234531.C
Coelacanth	MODERN SPECIES	2252															TRIP13 (ENSLACG00000000286)	BRD9 (ENSLACG00000002519) ##22	ENSLACG00000005126
Tetrapoda	ANCESTRAL SPECIES	209													ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C
Anura	ANCESTRAL SPECIES	508															ENSGT00390000017432	ENSGT00950000183170.b.a ##22
Frog	MODERN SPECIES	6	pdcd6ip (ENSXETG00000017906)	fhod3 (ENSXETG00000017899)	sacm1l (ENSXETG00000036624)	snrpd1 (ENSXETG00000027354)	slc6a20 (ENSXETG00000035895)	alg2 (ENSXETG00000011972)	limd1 (ENSXETG00000031781)	nr4a3 (ENSXETG00000024016)	erp44 (ENSXETG00000013069)	ouro2 (ENSXETG00000013076)	lztfl1 (ENSXETG00000013099)	ENSXETG00000039911	ccr3 (ENSXETG00000030096)	ENSXETG00000041681	trip13 (ENSXETG00000013105)	brd9 (ENSXETG00000013106) ##22	cdk13 (ENSXETG00000013107)	rala (ENSXETG00000013108)	med1l (ENSXETG00000026977)	yae1 (ENSXETG00000013109)	tbx20 (ENSXETG00000013110)	herpud2 (ENSXETG00000013111)	ENSXETG00000045708	septin7 (ENSXETG00000013112)	eepd1 (ENSXETG00000034702)	kiaa0895 (ENSXETG00000013115)	anln (ENSXETG00000000343)	aoah (ENSXETG00000036419)	elmo1 (ENSXETG00000031168)	gpr141 (ENSXETG00000040142)	sfrp4 (ENSXETG00000042183)
Amniota	ANCESTRAL SPECIES	3	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.C	ENSGT01030000234613.a.a	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277
Sauria	ANCESTRAL SPECIES		ENSGT00950000183199.b	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Lepidosauria	ANCESTRAL SPECIES	71	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT01100000263773	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Laterata	ANCESTRAL SPECIES	49	ENSGT00940000160982	ENSGT01030000234977	ENSGT00940000154486.a.b	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Common wall lizard	MODERN SPECIES	4	INVS (ENSPMRG00000015917)	ENSPMRG00000015932	ERP44 (ENSPMRG00000015938)	NR4A3 (ENSPMRG00000015952)	ENSPMRG00000015958	ENSPMRG00000015962	ENSPMRG00000015969	ALG2 (ENSPMRG00000015975)	GLIPR2 (ENSPMRG00000015981)	RECK (ENSPMRG00000016032)	ENSPMRG00000016239	TGFBR1 (ENSPMRG00000016248)	ENSPMRG00000016254	ENSPMRG00000016259	TRIP13 (ENSPMRG00000016264)	BRD9 (ENSPMRG00000016272) ##22	ENSPMRG00000016285	TPPP (ENSPMRG00000016291)	CEP72 (ENSPMRG00000016297)	SLC9A3 (ENSPMRG00000016309)	PLEKHG4B (ENSPMRG00000016335)	ENSPMRG00000016344	LRRC14B (ENSPMRG00000016352)	ENSPMRG00000016354	CCDC127 (ENSPMRG00000016359)	SDHA (ENSPMRG00000016367)	FH (ENSPMRG00000016382)	CHMP5 (ENSPMRG00000016395)	BAG1 (ENSPMRG00000016405)	ZNF830 (ENSPMRG00000016415)	ENSPMRG00000016422 ##16
Argentine black and white tegu	MODERN SPECIES	5	ENSSMRG00000009921	MSANTD3 (ENSSMRG00000009929)	ENSSMRG00000009930	TEX10 (ENSSMRG00000009931)	INVS (ENSSMRG00000009932)	ERP44 (ENSSMRG00000009935)	ENSSMRG00000009940	NR4A3 (ENSSMRG00000009945)	SEC61B (ENSSMRG00000009950)	ALG2 (ENSSMRG00000009952)	GLIPR2 (ENSSMRG00000009953)	RECK (ENSSMRG00000009977)	TGFBR1 (ENSSMRG00000009981)	ENSSMRG00000009982	TRIP13 (ENSSMRG00000009986)	BRD9 (ENSSMRG00000009991) ##22	ENSSMRG00000009996	TPPP (ENSSMRG00000009999)	CEP72 (ENSSMRG00000010003)	SLC9A3 (ENSSMRG00000010012)	PLEKHG4B (ENSSMRG00000010018)	LRRC14B (ENSSMRG00000010023)	CCDC127 (ENSSMRG00000010024)	SDHA (ENSSMRG00000010026)	FH (ENSSMRG00000010033)	CHMP5 (ENSSMRG00000010034)	BAG1 (ENSSMRG00000010036)	ZNF830 (ENSSMRG00000010039)	ENSSMRG00000010042 ##16	MOCOS (ENSSMRG00000010048)	PTPN3 (ENSSMRG00000010052)
Toxicofera	ANCESTRAL SPECIES	4	ENSGT01030000234613.a.a	ENSGT00960000188468	ENSGT00940000160982	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888	ENSGT00940000158331	ENSGT00940000159043
Elapidae	ANCESTRAL SPECIES	5	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000158616	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000157051	ENSGT00390000012151	ENSGT00450000040296	ENSGT00550000074817	ENSGT00950000183122.A	ENSGT00910000144277	ENSGT00390000008818	ENSGT00390000014303	ENSGT00940000154732.f	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000154807.b
Indian cobra	MODERN SPECIES	337	DDC (ENSNNAG00000005078)	GRB10 (ENSNNAG00000005868)	EXOC3 (ENSNNAG00000005885)	PDCD6 (ENSNNAG00000005925)	MSANTD3 (ENSNNAG00000005940)	TEX10 (ENSNNAG00000005960)	INVS (ENSNNAG00000006028)	ERP44 (ENSNNAG00000006046)	NR4A3 (ENSNNAG00000006079)	SEC61B (ENSNNAG00000006107)	ALG2 (ENSNNAG00000006116)	GLIPR2 (ENSNNAG00000006129)	RECK (ENSNNAG00000006147)	TGFBR1 (ENSNNAG00000006245)	TRIP13 (ENSNNAG00000006607)	BRD9 (ENSNNAG00000006643) ##22	ENSNNAG00000006786	SLC9A3 (ENSNNAG00000006815)	TMEM245 (ENSNNAG00000006924)	FRRS1L (ENSNNAG00000007455)	MOCOS (ENSNNAG00000007523)	ENSNNAG00000008057	BAG1 (ENSNNAG00000008101)	CHMP5 (ENSNNAG00000008181)	SDHA (ENSNNAG00000008248)	CCDC127 (ENSNNAG00000008528)	INO80C (ENSNNAG00000008549)	GALNT1 (ENSNNAG00000008573)	C18orf21 (ENSNNAG00000008625)	RPRD1A (ENSNNAG00000008651)	FHOD3 (ENSNNAG00000008705)
Elapidae_a	ANCESTRAL SPECIES	40	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000158616	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000157051	ENSGT00390000012151	ENSGT00450000040296	ENSGT00550000074817	ENSGT00950000183122.A	ENSGT00910000144277	ENSGT00390000008818	ENSGT00390000014303	ENSGT00940000154732.f	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000154807.b
Acanthophiinae	ANCESTRAL SPECIES	41	ENSGT00940000155909	ENSGT00530000063608.A	ENSGT01030000234613.a.a	ENSGT00940000160982	ENSGT00390000007901	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000158616	ENSGT00390000001667	ENSGT00940000159043	ENSGT00940000157051	ENSGT00390000012151	ENSGT00450000040296	ENSGT00550000074817	ENSGT00950000183122.A	ENSGT00910000144277	ENSGT00390000008818	ENSGT00390000014303	ENSGT00940000154732.f	ENSGT00390000013383	ENSGT00950000183094.b.b	ENSGT00940000154807.b
Mainland tiger snake	MODERN SPECIES	99	EXOC3 (ENSNSUG00000005728)	PDCD6 (ENSNSUG00000005727)	MSANTD3 (ENSNSUG00000005726)	ENSNSUG00000005725	ENSNSUG00000005724	INVS (ENSNSUG00000005723)	ERP44 (ENSNSUG00000005717)	NR4A3 (ENSNSUG00000005605)	SEC61B (ENSNSUG00000005603)	ALG2 (ENSNSUG00000005601)	GLIPR2 (ENSNSUG00000005600)	ENSNSUG00000005598	RECK (ENSNSUG00000005597)	TGFBR1 (ENSNSUG00000005590)	TRIP13 (ENSNSUG00000005584)	ENSNSUG00000005583 ##22	ENSNSUG00000005572	SLC9A3 (ENSNSUG00000005569)	ENSNSUG00000005566	ENSNSUG00000005565	FRRS1L (ENSNSUG00000005564)	MOCOS (ENSNSUG00000005496)	ENSNSUG00000005492	ENSNSUG00000005354	CHMP5 (ENSNSUG00000005353)	FH (ENSNSUG00000005352)	SDHA (ENSNSUG00000004177)	CCDC127 (ENSNSUG00000004145)	INO80C (ENSNSUG00000004142)	GALNT1 (ENSNSUG00000003933)	ENSNSUG00000003929
Eastern brown snake	MODERN SPECIES	18	GRB10 (ENSPTXG00000009308)	EXOC3 (ENSPTXG00000009314)	PDCD6 (ENSPTXG00000009318)	MSANTD3 (ENSPTXG00000009319)	TEX10 (ENSPTXG00000009321)	INVS (ENSPTXG00000009332)	ERP44 (ENSPTXG00000009333)	ENSPTXG00000009336	NR4A3 (ENSPTXG00000009337)	SEC61B (ENSPTXG00000009338)	ALG2 (ENSPTXG00000009339)	GLIPR2 (ENSPTXG00000009340)	RECK (ENSPTXG00000009341)	TGFBR1 (ENSPTXG00000009342)	TRIP13 (ENSPTXG00000009344)	BRD9 (ENSPTXG00000009345) ##22
Blue-lipped sea krait	MODERN SPECIES	9778																BRD9 (ENSLLTG00000009924) ##22	PIGA (ENSLLTG00000009910)	CHST14 (ENSLLTG00000009907)	GLRX5 (ENSLLTG00000009900)
Lizard	MODERN SPECIES	5	ENSACAG00000035281	INVS (ENSACAG00000008807)	ERP44 (ENSACAG00000008917)	ENSACAG00000038009	NR4A3 (ENSACAG00000008988)	ENSACAG00000039485	SEC61B (ENSACAG00000009059)	ALG2 (ENSACAG00000009062)	ENSACAG00000035824	ENSACAG00000038089	ENSACAG00000009097	ENSACAG00000045201	ENSACAG00000009195	ENSACAG00000042485	TRIP13 (ENSACAG00000009324)	BRD9 (ENSACAG00000009383) ##22	ENSACAG00000040247	TPPP (ENSACAG00000009421)	CEP72 (ENSACAG00000029204)	ENSACAG00000038400	SLC9A3 (ENSACAG00000009460)	ENSACAG00000038652	PLEKHG4B (ENSACAG00000009525)	CCDC127 (ENSACAG00000045163)	SDHA (ENSACAG00000009576)	ENSACAG00000009712	CHMP5 (ENSACAG00000035606)	ENSACAG00000039221	ENSACAG00000009799	ENSACAG00000009819 ##16	ENSACAG00000007096
tuatara	MODERN SPECIES	1712									ENSSPUG00000000853	ALG2 (ENSSPUG00000000857)	GLIPR2 (ENSSPUG00000000863)	RECK (ENSSPUG00000000884)	TGFBR1 (ENSSPUG00000001079)	ENSSPUG00000001086	TRIP13 (ENSSPUG00000001119)	BRD9 (ENSSPUG00000001169) ##22	ENSSPUG00000001547	TPPP (ENSSPUG00000001578)	CEP72 (ENSSPUG00000001589)	SLC9A3 (ENSSPUG00000001625)	ZMYND11 (ENSSPUG00000001782)	DIP2C (ENSSPUG00000001846) ##23	ENSSPUG00000002102	GTPBP4 (ENSSPUG00000002153)	ENSSPUG00000002164	WDR37 (ENSSPUG00000002176)	ENSSPUG00000002190	ENSSPUG00000002198	ENSSPUG00000002208	ENSSPUG00000002218	ENSSPUG00000002250
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00940000157173	ENSGT00940000157664	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Cryptodira	ANCESTRAL SPECIES	46	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT01100000263773	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00530000067915	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000164265.C	ENSGT00950000182910.a.b	ENSGT00940000160714	ENSGT00940000156387	ENSGT00450000040303	ENSGT01030000234543.F	ENSGT00390000000916	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000157664
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT01100000263773	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00530000067915	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00530000068739	ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT01100000263773	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00530000067915	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT00940000157051	ENSGT00940000157888
Abingdon island giant tortoise	MODERN SPECIES	2520														ENSCABG00000006447	TRIP13 (ENSCABG00000006445)	BRD9 (ENSCABG00000006374) ##22	ENSCABG00000006373	TPPP (ENSCABG00000006362)	ENSCABG00000006357	SLC9A3 (ENSCABG00000006352)	PLEKHG4B (ENSCABG00000006341)	LRRC14B (ENSCABG00000006338)	CCDC127 (ENSCABG00000006335)	ENSCABG00000006332	SDHA (ENSCABG00000006327)	FH (ENSCABG00000006319)	CHMP5 (ENSCABG00000006317)	BAG1 (ENSCABG00000006209)	ZNF830 (ENSCABG00000006204)	ENSCABG00000006201 ##16
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005001292	TEX10 (ENSGEVG00005001259)	INVS (ENSGEVG00005001220)	ERP44 (ENSGEVG00005001181)	STX17 (ENSGEVG00005001160)	NR4A3 (ENSGEVG00005001134)	SEC61B (ENSGEVG00005001115)	ALG2 (ENSGEVG00005001106)	ENSGEVG00005001095	GLIPR2 (ENSGEVG00005001080)	ENSGEVG00005001069	RECK (ENSGEVG00005001009)	TGFBR1 (ENSGEVG00005000944)	ENSGEVG00005000897	TRIP13 (ENSGEVG00005000866)	BRD9 (ENSGEVG00005000820) ##22	ENSGEVG00005000790	TPPP (ENSGEVG00005000776)	CEP72 (ENSGEVG00005000752)	SLC9A3 (ENSGEVG00005000687)	PLEKHG4B (ENSGEVG00005000651)	LRRC14B (ENSGEVG00005000630)	CCDC127 (ENSGEVG00005000609)	SDHA (ENSGEVG00005000563)	FH (ENSGEVG00005000536)	CHMP5 (ENSGEVG00005000515)	BAG1 (ENSGEVG00005000486)	ZNF830 (ENSGEVG00005000463)	ENSGEVG00005000414 ##16	MOCOS (ENSGEVG00005000353)	ENSGEVG00005000307
Emydidae	ANCESTRAL SPECIES	69			ENSGT00950000182992.a.a	ENSGT00940000157688	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a	ENSGT00390000003561	ENSGT00550000075033	ENSGT00530000067915	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00950000183122.A	ENSGT00550000074817	ENSGT00450000040296	ENSGT00390000012151	ENSGT00940000162768.A ##16	ENSGT01090000260003.a.b.b.a.a.a.b.b.b	ENSGT00940000157051
painted turtle	MODERN SPECIES	718	FHOD3 (ENSCPBG00000002983)	ENSCPBG00000002931	CTNNAL1 (ENSCPBG00000002865)	ABITRAM (ENSCPBG00000002839)	SLC39A6 (ENSCPBG00000002831)	TMEFF1 (ENSCPBG00000002816)	CAVIN4 (ENSCPBG00000002800)	ENSCPBG00000001941	EXOC3 (ENSCPBG00000001725)	PDCD6 (ENSCPBG00000001714)	ENSCPBG00000001692	AHRR (ENSCPBG00000001668)	MSANTD3 (ENSCPBG00000001654)	ENSCPBG00000001630	TRIP13 (ENSCPBG00000001609)	BRD9 (ENSCPBG00000001460) ##22	ENSCPBG00000001409	TPPP (ENSCPBG00000001388)	CEP72 (ENSCPBG00000001367)	SLC9A3 (ENSCPBG00000001095)	PLEKHG4B (ENSCPBG00000000936)	LRRC14B (ENSCPBG00000000904)	CCDC127 (ENSCPBG00000000894)	SDHA (ENSCPBG00000000867)	FH (ENSCPBG00000000847)	CHMP5 (ENSCPBG00000000830)	BAG1 (ENSCPBG00000000816)	ZNF830 (ENSCPBG00000000798)	ENSCPBG00000000733 ##16	ENSCPBG00000000636	MOCOS (ENSCPBG00000000596)
Three-toed box turtle	MODERN SPECIES	104		TEX10 (ENSTMTG00000011962)	INVS (ENSTMTG00000011876)	ERP44 (ENSTMTG00000011852)	STX17 (ENSTMTG00000011840)	NR4A3 (ENSTMTG00000011814)	SEC61B (ENSTMTG00000011804)	ALG2 (ENSTMTG00000011797)	ENSTMTG00000011784	GLIPR2 (ENSTMTG00000011770)	ENSTMTG00000011747	RECK (ENSTMTG00000011660)	ENSTMTG00000011610	ENSTMTG00000011598	TRIP13 (ENSTMTG00000011515)	BRD9 (ENSTMTG00000011451) ##22	ENSTMTG00000011434	TPPP (ENSTMTG00000011429)	SLC9A3 (ENSTMTG00000011384)	PLEKHG4B (ENSTMTG00000011339)	LRRC14B (ENSTMTG00000011327)
Chinese turtle	MODERN SPECIES	279	ALG2 (ENSPSIG00000001206)	ENSPSIG00000001216	NR4A3 (ENSPSIG00000012281)	STX17 (ENSPSIG00000012286)	ERP44 (ENSPSIG00000012987)	INVS (ENSPSIG00000013062)	TEX10 (ENSPSIG00000015500)	GLIPR2 (ENSPSIG00000017023)	ENSPSIG00000017139	RECK (ENSPSIG00000017558)	ENSPSIG00000018032	TGFBR1 (ENSPSIG00000018059)	ENSPSIG00000018207	ENSPSIG00000001221	TRIP13 (ENSPSIG00000003291)	BRD9 (ENSPSIG00000003875) ##22	ENSPSIG00000004020	TPPP (ENSPSIG00000004148)	CEP72 (ENSPSIG00000004678)	SLC9A3 (ENSPSIG00000004889)	ENSPSIG00000007107	ENSPSIG00000007172	EXOC3 (ENSPSIG00000007282)	ENSPSIG00000008001	ENSPSIG00000001238	CAVIN4 (ENSPSIG00000010725)	TMEFF1 (ENSPSIG00000010739)
Archosauria	ANCESTRAL SPECIES		ENSGT00940000158036	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b	ENSGT00940000153665.a	ENSGT00940000161612	ENSGT00390000014501	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00940000164061	ENSGT00940000156394	ENSGT00390000018540	ENSGT00390000020276.rb	ENSGT00530000067915	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031
Aves	ANCESTRAL SPECIES	24	ENSGT00940000158036	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b	ENSGT00940000153665.a	ENSGT00940000161612	ENSGT00390000014501	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00940000164061	ENSGT00940000156394	ENSGT00390000018540	ENSGT00390000020276.rb	ENSGT00530000067915	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688
Neognathae	ANCESTRAL SPECIES		ENSGT00940000154516.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000164061	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a	ENSGT00390000011362	ENSGT00940000162740.e	ENSGT00940000162740.f.b	ENSGT00940000162740.f.a	ENSGT00390000010779.b	ENSGT00990000205958	ENSGT00550000076117	ENSGT00390000002381.a
Galloanserae	ANCESTRAL SPECIES		ENSGT00390000016016.A	ENSGT00940000154516.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a	ENSGT00390000011362	ENSGT00940000162740.e	ENSGT00940000162740.f.b	ENSGT00940000162740.f.a	ENSGT00390000010779.b.e	ENSGT00990000205958	ENSGT00390000010779.a.b.a	ENSGT00550000076117
Anatidae	ANCESTRAL SPECIES	92															ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT01100000263710	ENSGT00940000155574.C	ENSGT00940000156148	ENSGT00940000153845.a.b	ENSGT00390000009163	ENSGT00940000153814.a	ENSGT00390000010260	ENSGT00950000182942.a.a	ENSGT01020000230359.C.b	ENSGT01020000230359.A	ENSGT01020000230359.B.c	ENSGT00550000075117	ENSGT00950000183099.u.b	ENSGT01050000244942.b.a.b
Duck	DUPLICATION
Duck	MODERN SPECIES	10	MAK (ENSAPLG00000003041)	GCM2 (ENSAPLG00000002817)	ENSAPLG00000018343	ELOVL2 (ENSAPLG00000002641)	SMIM13 (ENSAPLG00000023021)	NEDD9 (ENSAPLG00000001295)	ENSAPLG00000001290	ENSAPLG00000028781	ENSAPLG00000011790	ARPP21 (ENSAPLG00000004808)	STAC (ENSAPLG00000010417)	DCLK3 (ENSAPLG00000010406)	TRANK1 (ENSAPLG00000010356)	TRIP13 (ENSAPLG00000010065)	ENSAPLG00000018632 ##22	ENSAPLG00000010017 ##22	TPPP (ENSAPLG00000009901)	ENSAPLG00000017452	CLASP2 (ENSAPLG00000001903)	UBP1 (ENSAPLG00000001472)	FBXL2 (ENSAPLG00000001346)	ENSAPLG00000020944	SUSD5 (ENSAPLG00000001335)	CRTAP (ENSAPLG00000001236)	TMPPE (ENSAPLG00000001209)	GLB1 (ENSAPLG00000001019)	CCR4 (ENSAPLG00000001205)	EIF1B (ENSAPLG00000001143)	ENSAPLG00000023148	MYRIP (ENSAPLG00000016281)	ENSAPLG00000016788
Duck	MODERN SPECIES	10	ENSAPLG00000022114	MAK (ENSAPLG00000003041)	GCM2 (ENSAPLG00000002817)	ENSAPLG00000018343	ELOVL2 (ENSAPLG00000002641)	SMIM13 (ENSAPLG00000023021)	NEDD9 (ENSAPLG00000001295)	ENSAPLG00000001290	ENSAPLG00000028781	ENSAPLG00000011790	ARPP21 (ENSAPLG00000004808)	STAC (ENSAPLG00000010417)	DCLK3 (ENSAPLG00000010406)	TRANK1 (ENSAPLG00000010356)	TRIP13 (ENSAPLG00000010065)	ENSAPLG00000018632 ##22	ENSAPLG00000010017 ##22	TPPP (ENSAPLG00000009901)	ENSAPLG00000017452	CLASP2 (ENSAPLG00000001903)	UBP1 (ENSAPLG00000001472)	FBXL2 (ENSAPLG00000001346)	ENSAPLG00000020944	SUSD5 (ENSAPLG00000001335)	CRTAP (ENSAPLG00000001236)	TMPPE (ENSAPLG00000001209)	GLB1 (ENSAPLG00000001019)	CCR4 (ENSAPLG00000001205)	EIF1B (ENSAPLG00000001143)	ENSAPLG00000023148	MYRIP (ENSAPLG00000016281)
Pink-footed goose	MODERN SPECIES	297															TRIP13 (ENSABRG00000017917)	BRD9 (ENSABRG00000017906) ##22	TPPP (ENSABRG00000017899)	CLASP2 (ENSABRG00000016859)	UBP1 (ENSABRG00000016467)	FBXL2 (ENSABRG00000016264)	SUSD5 (ENSABRG00000016252)	CRTAP (ENSABRG00000016246)	CCR4 (ENSABRG00000016239)	CX3CR1 (ENSABRG00000016234)	GLB1 (ENSABRG00000016216)	ENSABRG00000016211	ENSABRG00000016208	SLC25A38 (ENSABRG00000016206)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00390000016016.A	ENSGT00940000154516.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a	ENSGT00390000011362	ENSGT00940000162740.e	ENSGT00940000162740.f.b	ENSGT00940000162740.f.a	ENSGT00390000010779.a.b.a	ENSGT00550000076117	ENSGT00390000002381.a	ENSGT00940000160858
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00390000016016.A	ENSGT00940000154516.b	ENSGT00940000154774	ENSGT00940000155013	ENSGT00940000157738	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a	ENSGT00390000011362	ENSGT00940000162740.e	ENSGT00940000162740.f.b	ENSGT00940000162740.f.a	ENSGT00390000010779.a.b.a	ENSGT00550000076117	ENSGT00390000002381.a	ENSGT00940000160858	ENSGT00390000015641
Chicken	MODERN SPECIES	11	ENSGALG00010008281	CUL1 (ENSGALG00010008300)	EZH2 (ENSGALG00010008330)	PDIA4 (ENSGALG00010008340)	RAMP3 (ENSGALG00010008362)	ADCY1 (ENSGALG00010008388)	IGFBP1 (ENSGALG00010008417)	IGFBP3 (ENSGALG00010008429)	TNS3 (ENSGALG00010008448)	ENSGALG00010008452	HUS1 (ENSGALG00010006912)	ENSGALG00010007118	NFX1 (ENSGALG00010007479)	SLC12A7 (ENSGALG00010007521)	TRIP13 (ENSGALG00010007567)	BRD9 (ENSGALG00010007580) ##22	TPPP (ENSGALG00010007624)	SLC9A3 (ENSGALG00010007655)	LRRC14B (ENSGALG00010007929)	ENSGALG00010007936 ##14	TGFBR1 (ENSGALG00010007951)	RECK (ENSGALG00010007982)	ADNP2 (ENSGALG00010008011)	RBFA (ENSGALG00010008052)	ENSGALG00010008018	ENSGALG00010008091	ENSGALG00010008097	ENSGALG00010008100	ENSGALG00010008145	TXNL4A (ENSGALG00010008160)	HSBP1L1 (ENSGALG00010008162)
Turkey	MODERN SPECIES	22	ENSMGAG00000022268	ENSMGAG00000001256	ENSMGAG00000020769	ENSMGAG00000001202	ENSMGAG00000022584	ENSMGAG00000001538	PDIA4 (ENSMGAG00000001335)	EZH2 (ENSMGAG00000001370)	CUL1 (ENSMGAG00000001436)	CNTNAP2 (ENSMGAG00000001546)	TPK1 (ENSMGAG00000001560)	ENSMGAG00000001792	ENSMGAG00000017931	SLC12A7 (ENSMGAG00000001576)	TRIP13 (ENSMGAG00000001806)	BRD9 (ENSMGAG00000001853) ##22	TPPP (ENSMGAG00000001895)	ENSMGAG00000001943	ENSMGAG00000001949 ##14	ENSMGAG00000002050	ENSMGAG00000002069	ADNP2 (ENSMGAG00000002126)	ENSMGAG00000002129	ENSMGAG00000002139	ENSMGAG00000002153	ENSMGAG00000018351	SLC66A2 (ENSMGAG00000002164)	KCNG2 (ENSMGAG00000002185)	CTDP1 (ENSMGAG00000002193)	NFATC1 (ENSMGAG00000002215)	ATP9B (ENSMGAG00000002250)
Japanese quail	MODERN SPECIES	11	LANCL2 (ENSCJPG00005000198)	EGFR (ENSCJPG00005000163)	SEC61G (ENSCJPG00005000142)	ENSCJPG00005000137	ENSCJPG00005000104	ADCY1 (ENSCJPG00005000050)	IGFBP1 (ENSCJPG00005019178)	IGFBP3 (ENSCJPG00005019177)	TNS3 (ENSCJPG00005018731)	HUS1 (ENSCJPG00005018730)	ENSCJPG00005018729	ENSCJPG00005018728	NFX1 (ENSCJPG00005018637)	SLC12A7 (ENSCJPG00005018048)	TRIP13 (ENSCJPG00005018033)	BRD9 (ENSCJPG00005018029) ##22	TPPP (ENSCJPG00005018028)	SLC9A3 (ENSCJPG00005018024)	LRRC14B (ENSCJPG00005018023)	ENSCJPG00005018021	TGFBR1 (ENSCJPG00005018020)	RECK (ENSCJPG00005018001)	ADNP2 (ENSCJPG00005018000)	RBFA (ENSCJPG00005017999)	ENSCJPG00005017998	ENSCJPG00005017997	ENSCJPG00005017995	ENSCJPG00005017994	KCNG2 (ENSCJPG00005017993)	CTDP1 (ENSCJPG00005017992)	NFATC1 (ENSCJPG00005017990)
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000157616	ENSGT00390000015641	ENSGT00940000160858	ENSGT00390000002381.a	ENSGT00550000076117	ENSGT00390000010779.b	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00940000157616	ENSGT00390000015641.a	ENSGT00940000160858	ENSGT00390000002381.a	ENSGT00550000076117	ENSGT00390000010779.b	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774
Golden eagle	MODERN SPECIES	9	KCNG2 (ENSACCG00020011498)	SLC66A2 (ENSACCG00020011646)	HSBP1L1 (ENSACCG00020011684)	ENSACCG00020011718	ENSACCG00020011749	ENSACCG00020011915	ENSACCG00020011964	RBFA (ENSACCG00020011987)	ADNP2 (ENSACCG00020012003)	RECK (ENSACCG00020012029)	ENSACCG00020012067	TGFBR1 (ENSACCG00020012084)	ENSACCG00020012112	ENSACCG00020012183	TRIP13 (ENSACCG00020012230)	BRD9 (ENSACCG00020012343) ##22	TPPP (ENSACCG00020012482)	SLC9A3 (ENSACCG00020012518)	LRRC14B (ENSACCG00020012554)	ENSACCG00020012615	NFX1 (ENSACCG00020012785)	ENSACCG00020012901	HUS1 (ENSACCG00020012940)	TNS3 (ENSACCG00020012993)	IGFBP3 (ENSACCG00020013050)	IGFBP1 (ENSACCG00020013063)	ADCY1 (ENSACCG00020013088)	RAMP3 (ENSACCG00020013106)
Kakapo	MODERN SPECIES		ATP9B (ENSSHBG00005002277)	NFATC1 (ENSSHBG00005004462)	CTDP1 (ENSSHBG00005004505)	ENSSHBG00005004512	KCNG2 (ENSSHBG00005004515)	SLC66A2 (ENSSHBG00005004519)	HSBP1L1 (ENSSHBG00005004523)	ENSSHBG00005004529	ENSSHBG00005004534	ENSSHBG00005004540	RBFA (ENSSHBG00005004546)	ADNP2 (ENSSHBG00005004556)	RECK (ENSSHBG00005004568)	TGFBR1 (ENSSHBG00005004589)	ENSSHBG00005004600	BRD9 (ENSSHBG00005004612) ##22	TRIP13 (ENSSHBG00005004617)	TPPP (ENSSHBG00005004621)	SLC9A3 (ENSSHBG00005004629)	LRRC14B (ENSSHBG00005004635)	ENSSHBG00005004647	CHPF2 (ENSSHBG00005004661)	ABCF2 (ENSSHBG00005004667)	H2BK1 (ENSSHBG00005004671)	ENSSHBG00005004675	GBX1 (ENSSHBG00005004678)	AGAP3 (ENSSHBG00005004683)	TMUB1 (ENSSHBG00005004686)	FASTK (ENSSHBG00005004693)	SLC4A2 (ENSSHBG00005004702)	CDK5 (ENSSHBG00005004712)
Passeriformes	ANCESTRAL SPECIES		ENSGT00390000015641	ENSGT00940000160858	ENSGT00390000002381.a	ENSGT01000000215617	ENSGT00990000205958	ENSGT00390000010779.b	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000159827
Great tit	MODERN SPECIES	11	ATP9B (ENSPMJG00000018156)	NFATC1 (ENSPMJG00000018155)	CTDP1 (ENSPMJG00000018154)	KCNG2 (ENSPMJG00000018153)	SLC66A2 (ENSPMJG00000018152)	ENSPMJG00000018150	ENSPMJG00000018149	ENSPMJG00000018148	ENSPMJG00000018147	ENSPMJG00000018146	ADNP2 (ENSPMJG00000018145)	RECK (ENSPMJG00000018143)	TGFBR1 (ENSPMJG00000018141)	ENSPMJG00000018140	TRIP13 (ENSPMJG00000018139)	BRD9 (ENSPMJG00000018138) ##22	TPPP (ENSPMJG00000018137)	SLC9A3 (ENSPMJG00000018136)	LRRC14B (ENSPMJG00000018135)	RAMP3 (ENSPMJG00000018133)	ADCY1 (ENSPMJG00000018130)	IGFBP1 (ENSPMJG00000018128)	IGFBP3 (ENSPMJG00000018127)	RPS21 (ENSPMJG00000018126)	POU6F2 (ENSPMJG00000018124)	VPS41 (ENSPMJG00000018123)	AMPH (ENSPMJG00000018122)	ENSPMJG00000018121	ENSPMJG00000018120	ENSPMJG00000018067	LRRFIP2 (ENSPMJG00000018066)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00390000015641	ENSGT00940000160858	ENSGT00390000002381.a	ENSGT01000000215617	ENSGT00990000205958	ENSGT00390000010779.b	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000159827
Flycatcher	MODERN SPECIES	11	NFATC1 (ENSFALG00000013333)	CTDP1 (ENSFALG00000013330)	KCNG2 (ENSFALG00000013326)	SLC66A2 (ENSFALG00000013325)	ENSFALG00000023268	ENSFALG00000013321	ENSFALG00000013317	ENSFALG00000026235	ENSFALG00000013312	RBFA (ENSFALG00000013303)	ADNP2 (ENSFALG00000013299)	ENSFALG00000013292	ENSFALG00000013285	ENSFALG00000013256	TRIP13 (ENSFALG00000013242)	BRD9 (ENSFALG00000013234) ##22	ENSFALG00000024175	TPPP (ENSFALG00000024481)	SLC9A3 (ENSFALG00000013226)	ENSFALG00000013224	RAMP3 (ENSFALG00000013222)	ADCY1 (ENSFALG00000013204)	IGFBP1 (ENSFALG00000013189)	ENSFALG00000013184	ENSFALG00000028134	TNS3 (ENSFALG00000013179)	HUS1 (ENSFALG00000013176)	ENSFALG00000026671	ENSFALG00000013143	ENSFALG00000013128	PPP1R17 (ENSFALG00000023160)
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00390000015641	ENSGT00940000160858	ENSGT00390000002381.a	ENSGT01000000215617	ENSGT00990000205958	ENSGT00390000010779.b	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00390000005586	ENSGT00940000155331.A
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000157616	ENSGT00390000015641	ENSGT00940000160858	ENSGT00390000002381.a	ENSGT00990000205958	ENSGT00390000010779.b	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000161026	ENSGT00940000154872.C	ENSGT00940000157394	ENSGT00940000158092	ENSGT00940000156328.b	ENSGT00390000000706	ENSGT00950000183199.b	ENSGT00940000156325	ENSGT00940000157657	ENSGT00390000005586	ENSGT00940000155331.A
Common canary	MODERN SPECIES	24	NFATC1 (ENSSCAG00000000432)	CTDP1 (ENSSCAG00000000305)	KCNG2 (ENSSCAG00000000228)	SLC66A2 (ENSSCAG00000000219)	ENSSCAG00000000206	ENSSCAG00000000178	ENSSCAG00000015804	ENSSCAG00000015798	ENSSCAG00000015794	RBFA (ENSSCAG00000015790)	ADNP2 (ENSSCAG00000015786)	RECK (ENSSCAG00000015778)	TGFBR1 (ENSSCAG00000015773)	COL15A1 (ENSSCAG00000015735)	TRIP13 (ENSSCAG00000015717)	BRD9 (ENSSCAG00000015689) ##22	TPPP (ENSSCAG00000015680)	SLC9A3 (ENSSCAG00000015674)	LRRC14B (ENSSCAG00000015670)	RAMP3 (ENSSCAG00000015668)	ADCY1 (ENSSCAG00000015661)	IGFBP1 (ENSSCAG00000015655)	IGFBP3 (ENSSCAG00000015653)	TNS3 (ENSSCAG00000015645)	HUS1 (ENSSCAG00000015637)	CLASP2 (ENSSCAG00000015626)	UBP1 (ENSSCAG00000015619)	FBXL2 (ENSSCAG00000015614)	SUSD5 (ENSSCAG00000015611)	CRTAP (ENSSCAG00000015609)	PDIA4 (ENSSCAG00000015603)
Zebra finch	MODERN SPECIES	12	NFATC1 (ENSTGUG00000006621)	CTDP1 (ENSTGUG00000006649)	KCNG2 (ENSTGUG00000006664)	SLC66A2 (ENSTGUG00000023857)	ENSTGUG00000020282	ENSTGUG00000026150	ENSTGUG00000006673	RBFA (ENSTGUG00000006676)	ENSTGUG00000019084	ENSTGUG00000026378	ADNP2 (ENSTGUG00000006688)	RECK (ENSTGUG00000006692)	TGFBR1 (ENSTGUG00000006726)	COL15A1 (ENSTGUG00000025718)	TRIP13 (ENSTGUG00000006756)	BRD9 (ENSTGUG00000006776) ##22	TPPP (ENSTGUG00000006796)	SLC9A3 (ENSTGUG00000006804)	LRRC14B (ENSTGUG00000006854)	PDE1C (ENSTGUG00000006857)	PPP1R17 (ENSTGUG00000006926)	ENSTGUG00000019076	ENSTGUG00000006931	NFX1 (ENSTGUG00000007055)	ENSTGUG00000007087	HUS1 (ENSTGUG00000007091)	TNS3 (ENSTGUG00000007104)	RAMP3 (ENSTGUG00000025072)	ADCY1 (ENSTGUG00000007142)	IGFBP1 (ENSTGUG00000007176)	IGFBP3 (ENSTGUG00000028736)
Medium ground finch	MODERN SPECIES	28	CTDP1 (ENSGFOG00000013470)	KCNG2 (ENSGFOG00000013465)	SLC66A2 (ENSGFOG00000013461)	ENSGFOG00000013460	ENSGFOG00000013458	ENSGFOG00000013455	ENSGFOG00000013449	ENSGFOG00000013444	RBFA (ENSGFOG00000013436)	ADNP2 (ENSGFOG00000013430)	RECK (ENSGFOG00000013417)	TGFBR1 (ENSGFOG00000013413)	ENSGFOG00000013411	ENSGFOG00000013395	TRIP13 (ENSGFOG00000013391)	BRD9 (ENSGFOG00000013378) ##22	TPPP (ENSGFOG00000013360)	SLC9A3 (ENSGFOG00000013353)	LRRC14B (ENSGFOG00000013351)
African ostrich	MODERN SPECIES	172										ENSSCUG00000001106	GLIPR2 (ENSSCUG00000001108)	ENSSCUG00000001110	RECK (ENSSCUG00000001112)	TGFBR1 (ENSSCUG00000001114)	TRIP13 (ENSSCUG00000001116)	BRD9 (ENSSCUG00000001117) ##22	ENSSCUG00000001118	SLC9A3 (ENSSCUG00000001123)	ENSSCUG00000001141
Mammalia	ANCESTRAL SPECIES	65	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a
Platypus	MODERN SPECIES	86	GALNT1 (ENSOANG00000001744)	INO80C (ENSOANG00000001743)	TMEM245 (ENSOANG00000001742)	EPB41L4B (ENSOANG00000001740)	PTPN3 (ENSOANG00000014464)	MOCOS (ENSOANG00000014461)	FHOD3 (ENSOANG00000014458)	LPCAT1 (ENSOANG00000014456)	SLC6A3 (ENSOANG00000014454)	CLPTM1L (ENSOANG00000014453)	TERT (ENSOANG00000043881)	SLC6A18 (ENSOANG00000014449)	SLC6A19 (ENSOANG00000014448)	SLC12A7 (ENSOANG00000007713)	NKD2 (ENSOANG00000007712)	BRD9 (ENSOANG00000006284) ##22	ENSOANG00000007711	ENSOANG00000043052	TPPP (ENSOANG00000036144)	ENSOANG00000011257	SLC9A3 (ENSOANG00000014871)	ENSOANG00000042988	NFX1 (ENSOANG00000002524)	CHMP5 (ENSOANG00000049243)	ENSOANG00000043589	ANKS6 (ENSOANG00000014874)	ENSOANG00000014875	ENSOANG00000014876	TGFBR1 (ENSOANG00000040853)	RECK (ENSOANG00000014877)	GLIPR2 (ENSOANG00000043736)
Theria	ANCESTRAL SPECIES	11	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775.k	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775.k	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b.d	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775.k	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b.d	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775.k	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b.d	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00390000014303	ENSGT00940000154732	ENSGT00390000013383	ENSGT00950000183094.b.b
Common wonbat	MODERN SPECIES	1028	IRX1 (ENSVURG00010021515)	IRX2 (ENSVURG00010021523)	IRX4 (ENSVURG00010021536)	ENSVURG00010021544	MRPL36 (ENSVURG00010021548)	ENSVURG00010021553	LPCAT1 (ENSVURG00010021564)	SLC6A3 (ENSVURG00010021583)	CLPTM1L (ENSVURG00010021677)	ENSVURG00010021696	SLC6A18 (ENSVURG00010021703)	SLC6A19 (ENSVURG00010021711)	SLC12A7 (ENSVURG00010021732)	NKD2 (ENSVURG00010021744)	TRIP13 (ENSVURG00010021753)	BRD9 (ENSVURG00010021760) ##22	ENSVURG00010021770	TPPP (ENSVURG00010021774)	ENSVURG00010021776	SLC9A3 (ENSVURG00010021781)	EXOC3 (ENSVURG00010021807)	AHRR (ENSVURG00010021816)	PDCD6 (ENSVURG00010021822)	SDHA (ENSVURG00010021830)	CCDC127 (ENSVURG00010021836)	LRRC14B (ENSVURG00010021841)	ENSVURG00010021847	INO80C (ENSVURG00010021863)	GALNT1 (ENSVURG00010021867)	C18orf21 (ENSVURG00010021876)	RPRD1A (ENSVURG00010021882)
koala	MODERN SPECIES	22													ENSPCIG00000000360	NKD2 (ENSPCIG00000000449)	TRIP13 (ENSPCIG00000000635)	BRD9 (ENSPCIG00000000693) ##22	ENSPCIG00000002458	TPPP (ENSPCIG00000002507)	ENSPCIG00000002517	SLC9A3 (ENSPCIG00000016986)	EXOC3 (ENSPCIG00000016984)	AHRR (ENSPCIG00000016982)	PDCD6 (ENSPCIG00000016981)	SDHA (ENSPCIG00000016980)	CCDC127 (ENSPCIG00000016979)	LRRC14B (ENSPCIG00000016978)	ENSPCIG00000016974	INO80C (ENSPCIG00000016968)	GALNT1 (ENSPCIG00000016959)	C18orf21 (ENSPCIG00000016953)	RPRD1A (ENSPCIG00000036063)
Wallaby	MODERN SPECIES	10546																BRD9 (ENSMEUG00000004125) ##22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000018018	IRX1 (ENSSHAG00000013463)	IRX2 (ENSSHAG00000001675)	IRX4 (ENSSHAG00000023225)	NDUFS6 (ENSSHAG00000028770)	MRPL36 (ENSSHAG00000024894)	LPCAT1 (ENSSHAG00000016583)	SLC6A3 (ENSSHAG00000016299)	CLPTM1L (ENSSHAG00000016099)	ENSSHAG00000015951	SLC6A18 (ENSSHAG00000015730)	SLC6A19 (ENSSHAG00000015547)	SLC12A7 (ENSSHAG00000014012)	NKD2 (ENSSHAG00000027971)	TRIP13 (ENSSHAG00000009652)	BRD9 (ENSSHAG00000009296) ##22	ENSSHAG00000007984	TPPP (ENSSHAG00000031142)	ENSSHAG00000002890	SLC9A3 (ENSSHAG00000018696)	EXOC3 (ENSSHAG00000018665)	ENSSHAG00000018615	ENSSHAG00000029354	PDCD6 (ENSSHAG00000029064)	SDHA (ENSSHAG00000018352)	CCDC127 (ENSSHAG00000031404)	LRRC14B (ENSSHAG00000031046)	ENSSHAG00000018190	ENSSHAG00000027800	GALNT1 (ENSSHAG00000017215)	C18orf21 (ENSSHAG00000028476)
Opossum	MODERN SPECIES	2	ENSMODG00000041368	IRX2 (ENSMODG00000001446)	IRX4 (ENSMODG00000001437)	ENSMODG00000001425	MRPL36 (ENSMODG00000025120)	ENSMODG00000050731	LPCAT1 (ENSMODG00000001420)	SLC6A3 (ENSMODG00000001344)	CLPTM1L (ENSMODG00000000991)	ENSMODG00000000966	SLC6A18 (ENSMODG00000000921)	SLC6A19 (ENSMODG00000000905)	SLC12A7 (ENSMODG00000000878)	NKD2 (ENSMODG00000000828)	TRIP13 (ENSMODG00000000818)	BRD9 (ENSMODG00000000800) ##22	ENSMODG00000027635	TPPP (ENSMODG00000000701)	ENSMODG00000025641	ENSMODG00000029716	SLC9A3 (ENSMODG00000000680)	EXOC3 (ENSMODG00000000661)	ENSMODG00000036487	ENSMODG00000040823	PDCD6 (ENSMODG00000000631)	SDHA (ENSMODG00000000624)	ENSMODG00000000601	LRRC14B (ENSMODG00000000599)	ENSMODG00000025606	ENSMODG00000000506	GALNT1 (ENSMODG00000000501)
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Primates	ANCESTRAL SPECIES	8	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Lemuriformes	ANCESTRAL SPECIES	47	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000160982	ENSGT00940000154486.a.b	ENSGT01030000234613.a.a	ENSGT00940000158616	ENSGT00530000063884.a	ENSGT00940000153875.c
Mouse lemur	MODERN SPECIES	3	ICE1 (ENSMICG00000028221)	ADAMTS16 (ENSMICG00000010718)	IRX1 (ENSMICG00000011730)	IRX2 (ENSMICG00000013531)	IRX4 (ENSMICG00000029233)	NDUFS6 (ENSMICG00000014038)	LPCAT1 (ENSMICG00000032744)	SLC6A3 (ENSMICG00000017612)	CLPTM1L (ENSMICG00000000301)	TERT (ENSMICG00000010883)	SLC6A18 (ENSMICG00000010877)	SLC6A19 (ENSMICG00000033849)	SLC12A7 (ENSMICG00000028719)	NKD2 (ENSMICG00000029997)	TRIP13 (ENSMICG00000028604)	BRD9 (ENSMICG00000004306) ##22	LRRC14B (ENSMICG00000040725)	CCDC127 (ENSMICG00000008417)	SDHA (ENSMICG00000008421)	PDCD6 (ENSMICG00000026451)	ENSMICG00000030881	AHRR (ENSMICG00000047925)	EXOC3 (ENSMICG00000001847)	SLC9A3 (ENSMICG00000017074)	CEP72 (ENSMICG00000041644)	TPPP (ENSMICG00000042217)	ENSMICG00000032729	CDH18 (ENSMICG00000008090)	PABPC3 (ENSMICG00000011830)	CDH12 (ENSMICG00000013261)	CDH10 (ENSMICG00000009537)
Lemuriformes_a	ANCESTRAL SPECIES	135	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277	ENSGT00940000160982	ENSGT00940000154486.a.b	ENSGT01030000234613.a.a	ENSGT00940000158616	ENSGT00530000063884.a	ENSGT00940000153875.c
Coquerels sifaka	MODERN SPECIES	810															ENSPCOG00000014502	BRD9 (ENSPCOG00000014508) ##22	LRRC14B (ENSPCOG00000027523)	CCDC127 (ENSPCOG00000013507)	SDHA (ENSPCOG00000025392)	PDCD6 (ENSPCOG00000014048)	ENSPCOG00000020799	ENSPCOG00000013459	EXOC3 (ENSPCOG00000009532)	SLC9A3 (ENSPCOG00000016751)	CEP72 (ENSPCOG00000019206)	TPPP (ENSPCOG00000016581)
Greater bamboo lemur	MODERN SPECIES	11	ADAMTS16 (ENSPSMG00000009836)	IRX1 (ENSPSMG00000009843)	IRX2 (ENSPSMG00000009849)	IRX4 (ENSPSMG00000009857)	NDUFS6 (ENSPSMG00000009866)	LPCAT1 (ENSPSMG00000009909)	SLC6A3 (ENSPSMG00000009991)	CLPTM1L (ENSPSMG00000010152)	ENSPSMG00000010372	ENSPSMG00000010376	SLC6A18 (ENSPSMG00000010391)	SLC6A19 (ENSPSMG00000010402)	SLC12A7 (ENSPSMG00000010422)	NKD2 (ENSPSMG00000010442)	ENSPSMG00000010472	BRD9 (ENSPSMG00000010563) ##22	LRRC14B (ENSPSMG00000010614)	CCDC127 (ENSPSMG00000010615)	SDHA (ENSPSMG00000010830)	ENSPSMG00000010938
Bushbaby	MODERN SPECIES	341			IRX2 (ENSOGAG00000012910)	IRX4 (ENSOGAG00000030171)	NDUFS6 (ENSOGAG00000001319)	MRPL36 (ENSOGAG00000032891)	LPCAT1 (ENSOGAG00000000452)	SLC6A3 (ENSOGAG00000000448)	CLPTM1L (ENSOGAG00000013183)	TERT (ENSOGAG00000026171)	SLC6A18 (ENSOGAG00000013173)	SLC6A19 (ENSOGAG00000013166)	SLC12A7 (ENSOGAG00000012359)	NKD2 (ENSOGAG00000031525)	TRIP13 (ENSOGAG00000008813)	BRD9 (ENSOGAG00000008809) ##22	ENSOGAG00000004014	TPPP (ENSOGAG00000008805)	CEP72 (ENSOGAG00000008802)	SLC9A3 (ENSOGAG00000009995)	EXOC3 (ENSOGAG00000008272)	AHRR (ENSOGAG00000010416)	PDCD6 (ENSOGAG00000032623)	SDHA (ENSOGAG00000010357)	CCDC127 (ENSOGAG00000010354)	LRRC14B (ENSOGAG00000029649)
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Tarsier	MODERN SPECIES	4571													SLC12A7 (ENSTSYG00000036880)	NKD2 (ENSTSYG00000027300)	TRIP13 (ENSTSYG00000012786)	BRD9 (ENSTSYG00000036264) ##22	TPPP (ENSTSYG00000027270)
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Marmoset	MODERN SPECIES	11	ENSCJAG00000086287	IRX1 (ENSCJAG00000039020)	IRX2 (ENSCJAG00000008516)	IRX4 (ENSCJAG00000009376)	ENSCJAG00000075297	ENSCJAG00000083587	LPCAT1 (ENSCJAG00000011062)	SLC6A3 (ENSCJAG00000011089)	ENSCJAG00000047667	TERT (ENSCJAG00000048026)	SLC6A18 (ENSCJAG00000036709)	SLC6A19 (ENSCJAG00000011196)	SLC12A7 (ENSCJAG00000077601)	NKD2 (ENSCJAG00000043259)	TRIP13 (ENSCJAG00000003849)	BRD9 (ENSCJAG00000003867) ##22	ENSCJAG00000018670	ENSCJAG00000081432	CEP72 (ENSCJAG00000015720)	ENSCJAG00000084490	SLC9A3 (ENSCJAG00000017670)	ENSCJAG00000081609	EXOC3 (ENSCJAG00000017659)	ENSCJAG00000058861	AHRR (ENSCJAG00000061622)	ENSCJAG00000066243	PDCD6 (ENSCJAG00000017613)	SDHA (ENSCJAG00000017583)	CCDC127 (ENSCJAG00000052648)	LRRC14B (ENSCJAG00000017581)	PLEKHG4B (ENSCJAG00000017562)
Cebidae_a	ANCESTRAL SPECIES	82	ENSGT00950000183199.b	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Capuchin	MODERN SPECIES	565					IRX4 (ENSCCAG00000026621)	NDUFS6 (ENSCCAG00000022747)	LPCAT1 (ENSCCAG00000020616)	SLC6A3 (ENSCCAG00000023820)	CLPTM1L (ENSCCAG00000033112)	TERT (ENSCCAG00000030949)	SLC6A18 (ENSCCAG00000033077)	SLC6A19 (ENSCCAG00000030671)	SLC12A7 (ENSCCAG00000026806)	NKD2 (ENSCCAG00000024905)	TRIP13 (ENSCCAG00000036398)	BRD9 (ENSCCAG00000030358) ##22	ENSCCAG00000023315	TPPP (ENSCCAG00000025814)
Bolivian squirrel monkey	MODERN SPECIES	92	MED10 (ENSSBOG00000030219)	ICE1 (ENSSBOG00000018773)	ADAMTS16 (ENSSBOG00000031786)	IRX1 (ENSSBOG00000031823)	IRX4 (ENSSBOG00000035465)	NDUFS6 (ENSSBOG00000029679)	LPCAT1 (ENSSBOG00000021403)	SLC6A3 (ENSSBOG00000018794)	CLPTM1L (ENSSBOG00000027261)	TERT (ENSSBOG00000030569)	SLC6A18 (ENSSBOG00000025040)	SLC6A19 (ENSSBOG00000024736)	SLC12A7 (ENSSBOG00000021997)	NKD2 (ENSSBOG00000027973)	TRIP13 (ENSSBOG00000026544)	BRD9 (ENSSBOG00000003529) ##22	ENSSBOG00000025272	TPPP (ENSSBOG00000026704)	CEP72 (ENSSBOG00000024985)	ENSSBOG00000033295	SLC9A3 (ENSSBOG00000030362)	EXOC3 (ENSSBOG00000030936)	AHRR (ENSSBOG00000024176)	SDHA (ENSSBOG00000024262)	CCDC127 (ENSSBOG00000031596)	LRRC14B (ENSSBOG00000030057)	PLEKHG4B (ENSSBOG00000031830)
Mas night monkey	MODERN SPECIES	837	IRX1 (ENSANAG00000032866)	ENSANAG00000019516	ENSANAG00000036927	IRX2 (ENSANAG00000023050)	IRX4 (ENSANAG00000023256)	NDUFS6 (ENSANAG00000009591)	LPCAT1 (ENSANAG00000027756)	SLC6A3 (ENSANAG00000027816)	CLPTM1L (ENSANAG00000027142)	TERT (ENSANAG00000032128)	SLC6A18 (ENSANAG00000031192)	SLC6A19 (ENSANAG00000030219)	SLC12A7 (ENSANAG00000033651)	NKD2 (ENSANAG00000018792)	TRIP13 (ENSANAG00000029679)	BRD9 (ENSANAG00000025731) ##22	TPPP (ENSANAG00000024282)	SLC9A3 (ENSANAG00000032397)	EXOC3 (ENSANAG00000017201)	AHRR (ENSANAG00000023430)
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000160429	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000160429	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m	ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000160429	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m	ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Vervet Monkey	MODERN SPECIES	23	ENSCSAG00000017351	IRX2 (ENSCSAG00000017353)	IRX4 (ENSCSAG00000017357)	NDUFS6 (ENSCSAG00000017360)	MRPL36 (ENSCSAG00000018986)	LPCAT1 (ENSCSAG00000017363)	SLC6A3 (ENSCSAG00000017367)	CLPTM1L (ENSCSAG00000017368)	TERT (ENSCSAG00000017381)	SLC6A18 (ENSCSAG00000017392)	SLC6A19 (ENSCSAG00000017393)	SLC12A7 (ENSCSAG00000017399)	NKD2 (ENSCSAG00000017405)	ENSCSAG00000017408	TRIP13 (ENSCSAG00000017410)	BRD9 (ENSCSAG00000017415) ##22	ENSCSAG00000017418	ENSCSAG00000017419	TPPP (ENSCSAG00000017421)	CEP72 (ENSCSAG00000017424)	SLC9A3 (ENSCSAG00000017425)	EXOC3 (ENSCSAG00000017428)	AHRR (ENSCSAG00000017432)	PDCD6 (ENSCSAG00000017437)	CCDC127 (ENSCSAG00000017439)	LRRC14B (ENSCSAG00000017440)	PLEKHG4B (ENSCSAG00000017443)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT00960000188468	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m	ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT00960000188468	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m	ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT00960000188468	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m	ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Rhesus	MODERN SPECIES	16	IRX2 (ENSMMUG00000005802)	ENSMMUG00000057427	IRX4 (ENSMMUG00000004220)	NDUFS6 (ENSMMUG00000004447)	MRPL36 (ENSMMUG00000004451)	ENSMMUG00000059497	LPCAT1 (ENSMMUG00000005199)	SLC6A3 (ENSMMUG00000005198)	CLPTM1L (ENSMMUG00000005193)	TERT (ENSMMUG00000010940)	SLC6A18 (ENSMMUG00000010938)	SLC6A19 (ENSMMUG00000010935)	SLC12A7 (ENSMMUG00000019441)	NKD2 (ENSMMUG00000019439)	TRIP13 (ENSMMUG00000014740)	BRD9 (ENSMMUG00000014738) ##22	TPPP (ENSMMUG00000061096)	CEP72 (ENSMMUG00000003791)	SLC9A3 (ENSMMUG00000003789)	EXOC3 (ENSMMUG00000003787)	AHRR (ENSMMUG00000000752)	SDHA (ENSMMUG00000014452)	CCDC127 (ENSMMUG00000063025)	ENSMMUG00000058997	LRRC14B (ENSMMUG00000052713)	PLEKHG4B (ENSMMUG00000064521)
Crab-eating macaque	MODERN SPECIES	16	IRX2 (ENSMFAG00000064595)	IRX4 (ENSMFAG00000044841)	NDUFS6 (ENSMFAG00000032708)	ENSMFAG00000049680	ENSMFAG00000047980	ENSMFAG00000064340	SLC6A3 (ENSMFAG00000003977)	ENSMFAG00000065048	CLPTM1L (ENSMFAG00000039815)	TERT (ENSMFAG00000033142)	SLC6A18 (ENSMFAG00000029794)	SLC6A19 (ENSMFAG00000031540)	SLC12A7 (ENSMFAG00000027549)	NKD2 (ENSMFAG00000046329)	TRIP13 (ENSMFAG00000003891)	BRD9 (ENSMFAG00000040715) ##22	ENSMFAG00000039221	ENSMFAG00000053545	ENSMFAG00000003548	CEP72 (ENSMFAG00000032507)	SLC9A3 (ENSMFAG00000003512)	EXOC3 (ENSMFAG00000029713)	AHRR (ENSMFAG00000050747)	ENSMFAG00000060094	PDCD6 (ENSMFAG00000060093)	ENSMFAG00000010720	CCDC127 (ENSMFAG00000033953)
Pig-tailed macaque	MODERN SPECIES	330			PLEKHG4B (ENSMNEG00000032213)	LRRC14B (ENSMNEG00000042735)	CCDC127 (ENSMNEG00000043314)	ENSMNEG00000028348	LPCAT1 (ENSMNEG00000031253)	SLC6A3 (ENSMNEG00000033539)	CLPTM1L (ENSMNEG00000038901)	TERT (ENSMNEG00000041254)	SLC6A18 (ENSMNEG00000035364)	SLC6A19 (ENSMNEG00000000294)	SLC12A7 (ENSMNEG00000002426)	NKD2 (ENSMNEG00000005782)	TRIP13 (ENSMNEG00000009697)	BRD9 (ENSMNEG00000027548) ##22	ENSMNEG00000031215
Cercopithecinae_b	ANCESTRAL SPECIES	4			ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277.b.b.a.a.b	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m	ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00960000188468	ENSGT00390000010866	ENSGT00390000015775	ENSGT00940000158596	ENSGT00940000161198	ENSGT00390000002325	ENSGT00940000160429
Olive baboon	MODERN SPECIES	15							LPCAT1 (ENSPANG00000014387)	SLC6A3 (ENSPANG00000014160)	CLPTM1L (ENSPANG00000007000)	TERT (ENSPANG00000026074)	SLC6A18 (ENSPANG00000014913)	SLC6A19 (ENSPANG00000012179)	SLC12A7 (ENSPANG00000025613)	NKD2 (ENSPANG00000012309)	TRIP13 (ENSPANG00000020838)	BRD9 (ENSPANG00000004217) ##22	ENSPANG00000023865	MRPL36 (ENSPANG00000046315)	NDUFS6 (ENSPANG00000021407)	IRX4 (ENSPANG00000014386)	ENSPANG00000039393	IRX2 (ENSPANG00000003730)	ENSPANG00000004028	IRX1 (ENSPANG00000019076)	ADAMTS16 (ENSPANG00000014911)	ICE1 (ENSPANG00000050694)	MED10 (ENSPANG00000016714)	UBE2QL1 (ENSPANG00000015779)	NSUN2 (ENSPANG00000004215)	SRD5A1 (ENSPANG00000010793)	TENT4A (ENSPANG00000004005)
Cercopithecinae_d	ANCESTRAL SPECIES	193			ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277.b.b.a.a.b	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.m
Sooty mangabey	MODERN SPECIES	331							ENSCATG00000036041	LPCAT1 (ENSCATG00000034258)	SLC6A3 (ENSCATG00000003841)	CLPTM1L (ENSCATG00000030496)	TERT (ENSCATG00000036594)	SLC6A19 (ENSCATG00000036906)	SLC12A7 (ENSCATG00000038088)	NKD2 (ENSCATG00000034477)	TRIP13 (ENSCATG00000029566)	BRD9 (ENSCATG00000020812) ##22
Drill	MODERN SPECIES	1434					CCDC127 (ENSMLEG00000000748)	ENSMLEG00000039044	ENSMLEG00000026613	SLC6A3 (ENSMLEG00000035108)	CLPTM1L (ENSMLEG00000038799)	ENSMLEG00000031745	SLC6A18 (ENSMLEG00000023403)	SLC6A19 (ENSMLEG00000032607)	SLC12A7 (ENSMLEG00000001781)	NKD2 (ENSMLEG00000036751)	TRIP13 (ENSMLEG00000036069)	BRD9 (ENSMLEG00000033210) ##22	ENSMLEG00000032658
Rhinopithecus	ANCESTRAL SPECIES	385			ENSGT00940000162507.A	ENSGT01030000234531.C	ENSGT00390000008818	ENSGT00910000144277.a	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22
Black snub-nosed monkey	MODERN SPECIES	1467							LPCAT1 (ENSRBIG00000042380)	SLC6A3 (ENSRBIG00000031678)	CLPTM1L (ENSRBIG00000029329)	TERT (ENSRBIG00000032252)	SLC6A18 (ENSRBIG00000034395)	SLC6A19 (ENSRBIG00000038147)	SLC12A7 (ENSRBIG00000030721)	NKD2 (ENSRBIG00000029861)	TRIP13 (ENSRBIG00000028516)	BRD9 (ENSRBIG00000042384) ##22
Golden snub-nosed monkey	MODERN SPECIES	1601			PLEKHG4B (ENSRROG00000043871)	LRRC14B (ENSRROG00000029577)	CCDC127 (ENSRROG00000035879)	ENSRROG00000038083	LPCAT1 (ENSRROG00000032009)	SLC6A3 (ENSRROG00000031315)	CLPTM1L (ENSRROG00000030446)	TERT (ENSRROG00000032554)	SLC6A18 (ENSRROG00000033156)	SLC6A19 (ENSRROG00000037264)	SLC12A7 (ENSRROG00000045108)	NKD2 (ENSRROG00000045048)	TRIP13 (ENSRROG00000042943)	BRD9 (ENSRROG00000036960) ##22
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00890000139491.f	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Hominidae	ANCESTRAL SPECIES	7	ENSGT00890000139491.f	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00490000044126	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00890000139491.f	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866.i.a	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a.m ##22	ENSGT00940000161608.k	ENSGT00940000161608.l	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00490000044126	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Gorilla	MODERN SPECIES	8	ENSGGOG00000040574	ENSGGOG00000015708	IRX2 (ENSGGOG00000015712)	ENSGGOG00000039292	NDUFS6 (ENSGGOG00000016951)	ENSGGOG00000016949	LPCAT1 (ENSGGOG00000015639)	SLC6A3 (ENSGGOG00000015631)	CLPTM1L (ENSGGOG00000015622)	TERT (ENSGGOG00000002607)	ENSGGOG00000038696	SLC6A19 (ENSGGOG00000007544)	SLC12A7 (ENSGGOG00000009629)	NKD2 (ENSGGOG00000004478)	ENSGGOG00000011642	BRD9 (ENSGGOG00000034974) ##22	ENSGGOG00000022375	ZDHHC11B (ENSGGOG00000000349)	TPPP (ENSGGOG00000000348)	CEP72 (ENSGGOG00000010622)	SLC9A3 (ENSGGOG00000013801)	ENSGGOG00000013795	EXOC3 (ENSGGOG00000013711)	AHRR (ENSGGOG00000013694)	ENSGGOG00000022307	ENSGGOG00000037863	CCDC127 (ENSGGOG00000002664)	LRRC14B (ENSGGOG00000002663)	PLEKHG4B (ENSGGOG00000002656)
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00890000139491.f	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866.i.a	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a.m ##22	ENSGT00940000161608.k	ENSGT00940000161608.l	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00490000044126	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Pan	ANCESTRAL SPECIES	21	ENSGT00890000139491.f	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866.i.a	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531.g	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a.m ##22	ENSGT00950000183170.b.a.n ##22	ENSGT00940000161608.k	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00490000044126	ENSGT01030000234613.a.a	ENSGT00950000186162	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Bonobo	MODERN SPECIES	17	GSX2 (ENSPPAG00000030659)	ENSPPAG00000039875	PDGFRA (ENSPPAG00000031952)	KIT (ENSPPAG00000032952)	KDR (ENSPPAG00000042774)	SRD5A3 (ENSPPAG00000028976)	TMEM165 (ENSPPAG00000035865)	CLOCK (ENSPPAG00000029615)	PDCL2 (ENSPPAG00000038480)	NMU (ENSPPAG00000038124)	EXOC1L (ENSPPAG00000028553)	EXOC1 (ENSPPAG00000043855)	CEP135 (ENSPPAG00000043866)	ENSPPAG00000042190	CRACD (ENSPPAG00000032829)	ENSPPAG00000035697 ##22	AASDH (ENSPPAG00000031321)	ENSPPAG00000041564	PPAT (ENSPPAG00000041710)	PAICS (ENSPPAG00000035354)	SRP72 (ENSPPAG00000042265)	ENSPPAG00000024206	ENSPPAG00000012871	THEGL (ENSPPAG00000040982)	ENSPPAG00000029565	ENSPPAG00000040689	ENSPPAG00000037067	REST (ENSPPAG00000004172)	NOA1 (ENSPPAG00000033775)	POLR2B (ENSPPAG00000040253)	ENSPPAG00000025759
Chimpanzee	MODERN SPECIES	549															ENSPTRG00000049196	ENSPTRG00000016688 ##22
Human	MODERN SPECIES	17	ADAMTS16 (ENSG00000145536)	IRX1 (ENSG00000170549)	IRX2 (ENSG00000170561)	IRX4 (ENSG00000113430)	NDUFS6 (ENSG00000145494)	MRPL36 (ENSG00000171421)	LPCAT1 (ENSG00000153395)	SLC6A3 (ENSG00000142319)	CLPTM1L (ENSG00000049656)	TERT (ENSG00000164362)	SLC6A18 (ENSG00000164363)	SLC6A19 (ENSG00000174358)	SLC12A7 (ENSG00000113504)	NKD2 (ENSG00000145506)	TRIP13 (ENSG00000071539)	BRD9 (ENSG00000028310) ##22	ZDHHC11 (ENSG00000188818)	ZDHHC11B (ENSG00000206077)	TPPP (ENSG00000171368)	CEP72 (ENSG00000112877)	SLC9A3 (ENSG00000066230)	EXOC3 (ENSG00000180104)	AHRR (ENSG00000063438)	PDCD6 (ENSG00000249915)	SDHA (ENSG00000073578)	CCDC127 (ENSG00000164366)	LRRC14B (ENSG00000185028)	PLEKHG4B (ENSG00000153404)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a.n ##22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a.n ##22
Pan	ANCESTRAL SPECIES	21	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866.i.a	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531.g	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a.m ##22	ENSGT00950000183170.b.a.n ##22	ENSGT00940000161608.k	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT00490000044126	ENSGT01030000234613.a.a	ENSGT00950000186162	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277.b.a.a.a	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Chimpanzee	MODERN SPECIES	18	IRX2 (ENSPTRG00000016708)	IRX4 (ENSPTRG00000046893)	NDUFS6 (ENSPTRG00000016706)	MRPL36 (ENSPTRG00000016705)	ENSPTRG00000051244	LPCAT1 (ENSPTRG00000016701)	ENSPTRG00000045264	SLC6A3 (ENSPTRG00000016699)	TERT (ENSPTRG00000016696)	ENSPTRG00000044900	SLC6A18 (ENSPTRG00000016695)	SLC6A19 (ENSPTRG00000016694)	SLC12A7 (ENSPTRG00000016692)	NKD2 (ENSPTRG00000016691)	TRIP13 (ENSPTRG00000016689)	ENSPTRG00000049307 ##22	ENSPTRG00000051847	TPPP (ENSPTRG00000048240)	CEP72 (ENSPTRG00000016685)	SLC9A3 (ENSPTRG00000016682)	ENSPTRG00000050611	EXOC3 (ENSPTRG00000016680)	ENSPTRG00000038919	ENSPTRG00000043303	PDCD6 (ENSPTRG00000028788)	SDHA (ENSPTRG00000016677)	CCDC127 (ENSPTRG00000016674)	LRRC14B (ENSPTRG00000016673)	PLEKHG4B (ENSPTRG00000016672)
Orangutan	MODERN SPECIES	18	IRX2 (ENSPPYG00000015325)	IRX4 (ENSPPYG00000015324)	ENSPPYG00000015323	MRPL36 (ENSPPYG00000015322)	ENSPPYG00000031434	LPCAT1 (ENSPPYG00000015319)	SLC6A3 (ENSPPYG00000015318)	CLPTM1L (ENSPPYG00000015316)	ENSPPYG00000039637	ENSPPYG00000015315	SLC6A18 (ENSPPYG00000015314)	SLC6A19 (ENSPPYG00000015313)	SLC12A7 (ENSPPYG00000015312)	NKD2 (ENSPPYG00000015311)	TRIP13 (ENSPPYG00000015309)	BRD9 (ENSPPYG00000015308) ##22	ENSPPYG00000015307	TPPP (ENSPPYG00000015305)	CEP72 (ENSPPYG00000015304)	SLC9A3 (ENSPPYG00000015303)	ENSPPYG00000031699	EXOC3 (ENSPPYG00000015301)	ENSPPYG00000033712	ENSPPYG00000033507	ENSPPYG00000041521	PDCD6 (ENSPPYG00000015299)	SDHA (ENSPPYG00000015298)	CCDC127 (ENSPPYG00000015297)	LRRC14B (ENSPPYG00000015295)	PLEKHG4B (ENSPPYG00000015294)
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	14	INPP1 (ENSNLEG00000006655)	MFSD6 (ENSNLEG00000006661)	ENSNLEG00000026634	NAB1 (ENSNLEG00000035600)	ENSNLEG00000006675	STAT1 (ENSNLEG00000006694)	ENSNLEG00000006724	STAT4 (ENSNLEG00000006726)	MYO1B (ENSNLEG00000006735)	NABP1 (ENSNLEG00000030065)	CAVIN2 (ENSNLEG00000006776)	ENSNLEG00000013541	TMEFF2 (ENSNLEG00000006778)	ENSNLEG00000031318	ENSNLEG00000035441	ENSNLEG00000034807 ##22	ENSNLEG00000028697	SLC39A10 (ENSNLEG00000006791)	DNAH7 (ENSNLEG00000006803)	ENSNLEG00000033012	STK17B (ENSNLEG00000006813)	HECW2 (ENSNLEG00000006821)	ENSNLEG00000006833	GTF3C3 (ENSNLEG00000006837)	C2orf66 (ENSNLEG00000006848)	PGAP1 (ENSNLEG00000006849)	ANKRD44 (ENSNLEG00000006855)	SF3B1 (ENSNLEG00000006861)	COQ10B (ENSNLEG00000006871)	ENSNLEG00000029205	ENSNLEG00000006874
Gibbon	MODERN SPECIES	21	ENSNLEG00000027652	ENSNLEG00000011229	IRX2 (ENSNLEG00000011219)	ENSNLEG00000011213	ENSNLEG00000011199	MRPL36 (ENSNLEG00000011197)	LPCAT1 (ENSNLEG00000011167)	SLC6A3 (ENSNLEG00000011157)	CLPTM1L (ENSNLEG00000011133)	TERT (ENSNLEG00000011118)	SLC6A18 (ENSNLEG00000011105)	SLC6A19 (ENSNLEG00000026638)	SLC12A7 (ENSNLEG00000011016)	ENSNLEG00000011012	TRIP13 (ENSNLEG00000010974)	BRD9 (ENSNLEG00000010924) ##22	ENSNLEG00000035791	CEP72 (ENSNLEG00000010880)	SLC9A3 (ENSNLEG00000010872)	EXOC3 (ENSNLEG00000010866)	AHRR (ENSNLEG00000010815)	CCDC127 (ENSNLEG00000033464)	ENSNLEG00000010759	PLEKHG4B (ENSNLEG00000010753)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Tree shrew	MODERN SPECIES	668															TRIP13 (ENSTBEG00000005475)	BRD9 (ENSTBEG00000005300) ##22
Glires	ANCESTRAL SPECIES	7	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.v.b	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775.d.a	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001013677	Irx2 (ENSCGRG00001014435)	Irx4 (ENSCGRG00001014881)	ENSCGRG00001016119	Mrpl36 (ENSCGRG00001008138)	Lpcat1 (ENSCGRG00001005110)	Slc6a3 (ENSCGRG00001006359)	Clptm1l (ENSCGRG00001016619)	Tert (ENSCGRG00001012546)	Slc6a18 (ENSCGRG00001012926)	Slc6a19 (ENSCGRG00001011943)	ENSCGRG00001012265	Slc12a7 (ENSCGRG00001015337)	Nkd2 (ENSCGRG00001013334)	Trip13 (ENSCGRG00001003568)	Brd9 (ENSCGRG00001005749) ##22	Zdhhc11 (ENSCGRG00001008203)	Tppp (ENSCGRG00001013743)	Cep72 (ENSCGRG00001003306)	Slc9a3 (ENSCGRG00001022559)	Exoc3 (ENSCGRG00001012716)	Ahrr (ENSCGRG00001007683)	Pdcd6 (ENSCGRG00001009329)	Sdha (ENSCGRG00001000553)	Ccdc127 (ENSCGRG00001012397)	Lrrc14b (ENSCGRG00001012753)	Zfp72 (ENSCGRG00001017972)	ENSCGRG00001009553	ENSCGRG00001008463	Or14j1 (ENSCGRG00001009439)	Or2b4 (ENSCGRG00001007887)
Golden Hamster	MODERN SPECIES	619	ENSMAUG00000008753	Adamts16 (ENSMAUG00000014925)	Irx1 (ENSMAUG00000001495)	ENSMAUG00000009392	Irx2 (ENSMAUG00000014773)	Irx4 (ENSMAUG00000002904)	Ndufs6 (ENSMAUG00000011653)	Lpcat1 (ENSMAUG00000020192)	Clptm1l (ENSMAUG00000011502)	Tert (ENSMAUG00000008230)	Slc6a18 (ENSMAUG00000007818)	Slc6a19 (ENSMAUG00000021816)	Slc12a7 (ENSMAUG00000001535)	Nkd2 (ENSMAUG00000011293)	Trip13 (ENSMAUG00000018209)	Brd9 (ENSMAUG00000015050) ##22	Cep72 (ENSMAUG00000004918)	Slc9a3 (ENSMAUG00000020856)	Exoc3 (ENSMAUG00000021411)	Ahrr (ENSMAUG00000017965)	ENSMAUG00000008435	Sdha (ENSMAUG00000020809)	Ccdc127 (ENSMAUG00000019954)	Lrrc14b (ENSMAUG00000013534)	Zfp72 (ENSMAUG00000020123)	Tmx3 (ENSMAUG00000020916)	ENSMAUG00000005436	Sntg1 (ENSMAUG00000018471)	Pard6g (ENSMAUG00000009540)	Adnp2 (ENSMAUG00000012119)	Rbfa (ENSMAUG00000010060)
Cricetidae_B	ANCESTRAL SPECIES	37	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.v.b	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b
Northern American deer mouse	MODERN SPECIES	6	Adamts16 (ENSPEMG00000001407)	Irx1 (ENSPEMG00000016721)	Irx2 (ENSPEMG00000000903)	Irx4 (ENSPEMG00000007372)	Ndufs6 (ENSPEMG00000012127)	Mrpl36 (ENSPEMG00000006495)	Lpcat1 (ENSPEMG00000015897)	Slc6a3 (ENSPEMG00000017495)	Clptm1l (ENSPEMG00000007565)	Tert (ENSPEMG00000013643)	Slc6a18 (ENSPEMG00000008103)	Slc6a19 (ENSPEMG00000016690)	Slc12a7 (ENSPEMG00000009080)	Nkd2 (ENSPEMG00000009852)	Trip13 (ENSPEMG00000006165)	Brd9 (ENSPEMG00000000924) ##22	Zdhhc11 (ENSPEMG00000007387)	Tppp (ENSPEMG00000024974)	Cep72 (ENSPEMG00000009656)	Slc9a3 (ENSPEMG00000013325)	Exoc3 (ENSPEMG00000009178)	Ahrr (ENSPEMG00000014987)	Pdcd6 (ENSPEMG00000008592)	Sdha (ENSPEMG00000018520)	Ccdc127 (ENSPEMG00000007618)	Lrrc14b (ENSPEMG00000030149)	Zfp72 (ENSPEMG00000008140)
Prairie vole	MODERN SPECIES	6	Adamts16 (ENSMOCG00000006653)	Irx1 (ENSMOCG00000001127)	Irx2 (ENSMOCG00000002016)	Irx4 (ENSMOCG00000003602)	Ndufs6 (ENSMOCG00000020730)	Mrpl36 (ENSMOCG00000004885)	Lpcat1 (ENSMOCG00000020107)	Slc6a3 (ENSMOCG00000000701)	Clptm1l (ENSMOCG00000006930)	Tert (ENSMOCG00000002105)	Slc6a18 (ENSMOCG00000014604)	Slc6a19 (ENSMOCG00000022361)	Slc12a7 (ENSMOCG00000005766)	Nkd2 (ENSMOCG00000020604)	Trip13 (ENSMOCG00000001629)	Brd9 (ENSMOCG00000012173) ##22	Zdhhc11 (ENSMOCG00000011165)	Tppp (ENSMOCG00000018815)	Cep72 (ENSMOCG00000020226)	Slc9a3 (ENSMOCG00000016773)	Exoc3 (ENSMOCG00000017441)	Ahrr (ENSMOCG00000006297)	ENSMOCG00000020217	Sdha (ENSMOCG00000000203)	Ccdc127 (ENSMOCG00000015017)	Lrrc14b (ENSMOCG00000015632)	ENSMOCG00000000846	Ipo11 (ENSMOCG00000000236)	Dimt1 (ENSMOCG00000014366)	Kif2a (ENSMOCG00000002322)	Zswim6 (ENSMOCG00000016911)
Murinae	ANCESTRAL SPECIES	39	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b
Mus	ANCESTRAL SPECIES	22	ENSGT00860000135976	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.v.a	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT00940000159086	ENSGT00390000002993	ENSGT00940000157385	ENSGT00940000154828
Mus_A	ANCESTRAL SPECIES	14	ENSGT00860000135976	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896.b	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT00940000159086	ENSGT00390000002993.t	ENSGT00940000157385	ENSGT00940000154828
Mus_B	ANCESTRAL SPECIES	13	ENSGT00860000135976	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866.m	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896.b	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT00940000159086	ENSGT00390000002993.t	ENSGT00940000157385	ENSGT00940000154828
Mus_C	ANCESTRAL SPECIES	10	ENSGT00860000135976	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866.m	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896.b	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.v.b	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000153165.a.b.a.a.a.a.b	ENSGT00940000159086	ENSGT00390000002993.t	ENSGT00940000157385	ENSGT00940000154828
spretus	MODERN SPECIES	4	MGP_SPRETEiJ_G0019580	Irx1 (MGP_SPRETEiJ_G0019581)	Irx2 (MGP_SPRETEiJ_G0019582)	Irx4 (MGP_SPRETEiJ_G0019583)	Ndufs6 (MGP_SPRETEiJ_G0019584)	Mrpl36 (MGP_SPRETEiJ_G0019585)	Lpcat1 (MGP_SPRETEiJ_G0019586)	Slc6a3 (MGP_SPRETEiJ_G0019587)	Clptm1l (MGP_SPRETEiJ_G0019588)	Tert (MGP_SPRETEiJ_G0019589)	Slc6a18 (MGP_SPRETEiJ_G0019590)	Slc6a19 (MGP_SPRETEiJ_G0019591)	Slc12a7 (MGP_SPRETEiJ_G0019592)	Nkd2 (MGP_SPRETEiJ_G0019593)	Trip13 (MGP_SPRETEiJ_G0019594)	Brd9 (MGP_SPRETEiJ_G0019595) ##22	Zdhhc11 (MGP_SPRETEiJ_G0019596)	MGP_SPRETEiJ_G0019597	Tppp (MGP_SPRETEiJ_G0019598)	Cep72 (MGP_SPRETEiJ_G0019599)	Slc9a3 (MGP_SPRETEiJ_G0019600)	Exoc3 (MGP_SPRETEiJ_G0019601)	Ahrr (MGP_SPRETEiJ_G0019602)	Pdcd6 (MGP_SPRETEiJ_G0019603)	Sdha (MGP_SPRETEiJ_G0019604)	MGP_SPRETEiJ_G0019605	Lrrc14b (MGP_SPRETEiJ_G0019606)	Zfp72 (MGP_SPRETEiJ_G0019607)	Erap1 (MGP_SPRETEiJ_G0019608)	Cast (MGP_SPRETEiJ_G0019609)	Pcsk1 (MGP_SPRETEiJ_G0019610)
Steppe mouse	MODERN SPECIES	3330	Irx1 (ENSMSIG00000017250)	Irx2 (ENSMSIG00000017231)	Irx4 (ENSMSIG00000017201)	Ndufs6 (ENSMSIG00000017174)	Mrpl36 (ENSMSIG00000017166)	Lpcat1 (ENSMSIG00000017129)	Slc6a3 (ENSMSIG00000017069)	Clptm1l (ENSMSIG00000017023)	Tert (ENSMSIG00000016999)	Slc6a18 (ENSMSIG00000016330)	Slc6a19 (ENSMSIG00000016300)	ENSMSIG00000016283	Slc12a7 (ENSMSIG00000016137)	Nkd2 (ENSMSIG00000016110)	Trip13 (ENSMSIG00000016051)	ENSMSIG00000016004 ##22	ENSMSIG00000015988	Zdhhc11 (ENSMSIG00000015943)	Tppp (ENSMSIG00000015921)	Cep72 (ENSMSIG00000015901)	Slc9a3 (ENSMSIG00000015760)	Exoc3 (ENSMSIG00000015690)	Ahrr (ENSMSIG00000015635)	Pdcd6 (ENSMSIG00000015609)	Sdha (ENSMSIG00000015586)	Ccdc127 (ENSMSIG00000015569)	Lrrc14b (ENSMSIG00000015555)	Zfp72 (ENSMSIG00000015539)
Mouse	MODERN SPECIES	4	Adamts16 (ENSMUSG00000049538)	Irx1 (ENSMUSG00000060969)	Irx2 (ENSMUSG00000001504)	Irx4 (ENSMUSG00000021604)	Ndufs6 (ENSMUSG00000021606)	Mrpl36 (ENSMUSG00000021607)	Lpcat1 (ENSMUSG00000021608)	Slc6a3 (ENSMUSG00000021609)	Clptm1l (ENSMUSG00000021610)	Tert (ENSMUSG00000021611)	Slc6a18 (ENSMUSG00000021612)	Slc6a19 (ENSMUSG00000021565)	Slc12a7 (ENSMUSG00000017756)	Nkd2 (ENSMUSG00000021567)	Trip13 (ENSMUSG00000021569)	Brd9 (ENSMUSG00000057649) ##22	Zdhhc11 (ENSMUSG00000069189)	Tppp (ENSMUSG00000021573)	Cep72 (ENSMUSG00000021572)	Slc9a3 (ENSMUSG00000036123)	Exoc3 (ENSMUSG00000034152)	Ahrr (ENSMUSG00000021575)	Pdcd6 (ENSMUSG00000021576)	Sdha (ENSMUSG00000021577)	Ccdc127 (ENSMUSG00000021578)	Lrrc14b (ENSMUSG00000021579)	Zfp72 (ENSMUSG00000069184)	Ftl1-ps1 (ENSMUSG00000062382)	Zfp825 (ENSMUSG00000069208)	Erap1 (ENSMUSG00000021583)	Cast (ENSMUSG00000021585)
Ryukyu mouse	MODERN SPECIES	4	MGP_CAROLIEiJ_G0018696	Irx1 (MGP_CAROLIEiJ_G0018697)	Irx2 (MGP_CAROLIEiJ_G0018698)	Irx4 (MGP_CAROLIEiJ_G0018699)	Ndufs6 (MGP_CAROLIEiJ_G0018700)	Mrpl36 (MGP_CAROLIEiJ_G0018701)	Lpcat1 (MGP_CAROLIEiJ_G0018702)	Slc6a3 (MGP_CAROLIEiJ_G0018703)	Clptm1l (MGP_CAROLIEiJ_G0018704)	Tert (MGP_CAROLIEiJ_G0018705)	Slc6a18 (MGP_CAROLIEiJ_G0018706)	Slc6a19 (MGP_CAROLIEiJ_G0018707)	Slc12a7 (MGP_CAROLIEiJ_G0018708)	Nkd2 (MGP_CAROLIEiJ_G0018709)	Trip13 (MGP_CAROLIEiJ_G0018710)	Brd9 (MGP_CAROLIEiJ_G0018711) ##22	Zdhhc11 (MGP_CAROLIEiJ_G0018712)	MGP_CAROLIEiJ_G0018713	Tppp (MGP_CAROLIEiJ_G0018714)	Cep72 (MGP_CAROLIEiJ_G0018715)	Slc9a3 (MGP_CAROLIEiJ_G0018716)	Exoc3 (MGP_CAROLIEiJ_G0018717)	Ahrr (MGP_CAROLIEiJ_G0018718)	Pdcd6 (MGP_CAROLIEiJ_G0018719)	Sdha (MGP_CAROLIEiJ_G0018720)	Ccdc127 (MGP_CAROLIEiJ_G0018721)	Lrrc14b (MGP_CAROLIEiJ_G0018722)	Zfp72 (MGP_CAROLIEiJ_G0018723)	MGP_CAROLIEiJ_G0018724	Erap1 (MGP_CAROLIEiJ_G0018725)	Cast (MGP_CAROLIEiJ_G0018726)
Shrew mouse	MODERN SPECIES	2	MGP_PahariEiJ_G0015777	Irx1 (MGP_PahariEiJ_G0015778)	Irx2 (MGP_PahariEiJ_G0015779)	Irx4 (MGP_PahariEiJ_G0015780)	Ndufs6 (MGP_PahariEiJ_G0015781)	Mrpl36 (MGP_PahariEiJ_G0015782)	Lpcat1 (MGP_PahariEiJ_G0015783)	Slc6a3 (MGP_PahariEiJ_G0015784)	Clptm1l (MGP_PahariEiJ_G0015785)	Tert (MGP_PahariEiJ_G0015786)	Slc6a18 (MGP_PahariEiJ_G0015787)	Slc6a19 (MGP_PahariEiJ_G0015788)	Slc12a7 (MGP_PahariEiJ_G0015789)	Nkd2 (MGP_PahariEiJ_G0015790)	Trip13 (MGP_PahariEiJ_G0015791)	Brd9 (MGP_PahariEiJ_G0015792) ##22	Zdhhc11 (MGP_PahariEiJ_G0015793)	Tppp (MGP_PahariEiJ_G0015794)	Cep72 (MGP_PahariEiJ_G0015795)	Slc9a3 (MGP_PahariEiJ_G0015796)	Exoc3 (MGP_PahariEiJ_G0015797)	Ahrr (MGP_PahariEiJ_G0015798)	Pdcd6 (MGP_PahariEiJ_G0015799)	Sdha (MGP_PahariEiJ_G0015800)	Ccdc127 (MGP_PahariEiJ_G0015801)	Lrrc14b (MGP_PahariEiJ_G0015802)	Zfp72 (MGP_PahariEiJ_G0015803)	Erap1 (MGP_PahariEiJ_G0015804)	Cast (MGP_PahariEiJ_G0015805)	Pcsk1 (MGP_PahariEiJ_G0015806)	Ell2 (MGP_PahariEiJ_G0015807)
Rat	MODERN SPECIES		Adamts16 (ENSRNOG00000016812)	Irx1 (ENSRNOG00000033609)	Irx2 (ENSRNOG00000012742)	Irx4 (ENSRNOG00000012720)	Ndufs6l1 (ENSRNOG00000062531)	Mrpl36 (ENSRNOG00000023407)	Lpcat1 (ENSRNOG00000017930)	Slc6a3 (ENSRNOG00000017302)	Clptm1l (ENSRNOG00000016923)	Tert (ENSRNOG00000025327)	Slc6a18 (ENSRNOG00000016253)	Slc6a19 (ENSRNOG00000026501)	Slc12a7 (ENSRNOG00000016372)	Nkd2 (ENSRNOG00000016103)	Trip13 (ENSRNOG00000015810)	Brd9 (ENSRNOG00000015676) ##22	Zdhhc11 (ENSRNOG00000039743)	Tppp (ENSRNOG00000028261)	Cep72 (ENSRNOG00000015465)	Slc9a3 (ENSRNOG00000015159)	Exoc3 (ENSRNOG00000039776)	Ahrr (ENSRNOG00000014721)	Pdcd6 (ENSRNOG00000014485)	Sdha (ENSRNOG00000013331)	Ccdc127 (ENSRNOG00000066093)	Lrrc14b (ENSRNOG00000028357)	Rpl26-ps2 (ENSRNOG00000069113)	ENSRNOG00000064947	ENSRNOG00000063986	Leg1 (ENSRNOG00000012581)	AABR07000989.1 (ENSRNOG00000061741)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1637	Irx1 (ENSNGAG00000014877)	Irx2 (ENSNGAG00000011270)	Irx4 (ENSNGAG00000001660)	Ndufs6 (ENSNGAG00000001134)	Mrpl36 (ENSNGAG00000000723)	ENSNGAG00000016928	Lpcat1 (ENSNGAG00000015191)	Slc6a3 (ENSNGAG00000010441)	Clptm1l (ENSNGAG00000014230)	Tert (ENSNGAG00000000359)	Slc6a18 (ENSNGAG00000000073)	Slc6a19 (ENSNGAG00000017071)	Slc12a7 (ENSNGAG00000012867)	Nkd2 (ENSNGAG00000002099)	Trip13 (ENSNGAG00000016476)	Brd9 (ENSNGAG00000001695) ##22	Zdhhc11 (ENSNGAG00000011093)	Tppp (ENSNGAG00000009996)	Slc9a3 (ENSNGAG00000015393)	Exoc3 (ENSNGAG00000014567)	Ahrr (ENSNGAG00000007294)	Pdcd6 (ENSNGAG00000004643)	Sdha (ENSNGAG00000005141)	Ccdc127 (ENSNGAG00000001714)	Lrrc14b (ENSNGAG00000000023)	ENSNGAG00000016954
Lesser Egyptian jerboa	MODERN SPECIES	128	Irx1 (ENSJJAG00000021563)	ENSJJAG00000012959	Irx2 (ENSJJAG00000010684)	Irx4 (ENSJJAG00000000181)	Ndufs6 (ENSJJAG00000018200)	Mrpl36 (ENSJJAG00000017543)	Lpcat1 (ENSJJAG00000004764)	Slc6a3 (ENSJJAG00000018113)	Clptm1l (ENSJJAG00000017514)	Tert (ENSJJAG00000015110)	Slc6a18 (ENSJJAG00000013974)	Slc6a19 (ENSJJAG00000013014)	Slc12a7 (ENSJJAG00000013362)	Nkd2 (ENSJJAG00000022067)	Trip13 (ENSJJAG00000016963)	Brd9 (ENSJJAG00000001706) ##22	Zdhhc11 (ENSJJAG00000011440)	Tppp (ENSJJAG00000010294)	Cep72 (ENSJJAG00000008837)	Slc9a3 (ENSJJAG00000020607)	ENSJJAG00000020042	ENSJJAG00000017113	ENSJJAG00000015095	Hsd17b4 (ENSJJAG00000013321)	Ccnb1 (ENSJJAG00000007280)	Slc30a5 (ENSJJAG00000000942)	Pik3r1 (ENSJJAG00000020326)	Cd180 (ENSJJAG00000017107)	ENSJJAG00000011406	Adamts16 (ENSJJAG00000019243)	ENSJJAG00000010916
Kangaroo rat	MODERN SPECIES	340	Nsun2 (ENSDORG00000010247)	Ube2ql1 (ENSDORG00000026589)	ENSDORG00000008413	ENSDORG00000025435	Adamts16 (ENSDORG00000013854)	Irx4 (ENSDORG00000015537)	Ndufs6 (ENSDORG00000024296)	Lpcat1 (ENSDORG00000012382)	Slc6a3 (ENSDORG00000001501)	Clptm1l (ENSDORG00000010439)	Slc6a18 (ENSDORG00000011176)	Slc6a19 (ENSDORG00000029059)	Slc12a7 (ENSDORG00000012278)	Nkd2 (ENSDORG00000012275)	Trip13 (ENSDORG00000003482)	Brd9 (ENSDORG00000003483) ##22	Zdhhc11 (ENSDORG00000003485)	Tppp (ENSDORG00000000450)	Cep72 (ENSDORG00000014412)	Slc9a3 (ENSDORG00000024087)	Exoc3 (ENSDORG00000007060)	Ahrr (ENSDORG00000024523)	ENSDORG00000029717	Sdha (ENSDORG00000023147)	Ccdc127 (ENSDORG00000023859)	Lrrc14b (ENSDORG00000001054)	Prdm9 (ENSDORG00000001048)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Hystricomorpha_a	ANCESTRAL SPECIES	29	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Guinea pig	MODERN SPECIES	150		IRX1 (ENSCPOG00000021147)	IRX2 (ENSCPOG00000000858)	IRX4 (ENSCPOG00000023150)	NDUFS6 (ENSCPOG00000003772)	MRPL36 (ENSCPOG00000039695)	LPCAT1 (ENSCPOG00000038535)	SLC6A3 (ENSCPOG00000024044)	CLPTM1L (ENSCPOG00000007900)	TERT (ENSCPOG00000015559)	SLC6A18 (ENSCPOG00000010570)	SLC6A19 (ENSCPOG00000010563)	SLC12A7 (ENSCPOG00000006679)	NKD2 (ENSCPOG00000039687)	TRIP13 (ENSCPOG00000004081)	BRD9 (ENSCPOG00000004075) ##22	ENSCPOG00000033864	TPPP (ENSCPOG00000035664)	CEP72 (ENSCPOG00000008862)	SLC9A3 (ENSCPOG00000005992)	EXOC3 (ENSCPOG00000005988)	AHRR (ENSCPOG00000005984)	PDCD6 (ENSCPOG00000024481)	SDHA (ENSCPOG00000008921)	CCDC127 (ENSCPOG00000030881)	LRRC14B (ENSCPOG00000006132)	ENSCPOG00000032688	ENSCPOG00000020354
Hystricomorpha_b	ANCESTRAL SPECIES	60	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Long-tailed chinchilla	MODERN SPECIES	211	ICE1 (ENSCLAG00000006995)	ADAMTS16 (ENSCLAG00000011357)	IRX1 (ENSCLAG00000011133)	IRX2 (ENSCLAG00000010848)	IRX4 (ENSCLAG00000013236)	NDUFS6 (ENSCLAG00000007890)	LPCAT1 (ENSCLAG00000007581)	SLC6A3 (ENSCLAG00000006703)	CLPTM1L (ENSCLAG00000006371)	TERT (ENSCLAG00000006143)	SLC6A18 (ENSCLAG00000004695)	SLC6A19 (ENSCLAG00000005488)	SLC12A7 (ENSCLAG00000004556)	NKD2 (ENSCLAG00000003738)	TRIP13 (ENSCLAG00000003450)	BRD9 (ENSCLAG00000005681) ##22	ENSCLAG00000005177	TPPP (ENSCLAG00000005029)	CEP72 (ENSCLAG00000004221)	SLC9A3 (ENSCLAG00000004296)	EXOC3 (ENSCLAG00000003834)	AHRR (ENSCLAG00000003468)	PDCD6 (ENSCLAG00000003275)	SDHA (ENSCLAG00000002734)	CCDC127 (ENSCLAG00000006232)	LRRC14B (ENSCLAG00000006094)
Degu	DUPLICATION
Degu	MODERN SPECIES	49	ADAMTS16 (ENSODEG00000018405)	IRX1 (ENSODEG00000018349)	IRX2 (ENSODEG00000018250)	IRX4 (ENSODEG00000018434)	NDUFS6 (ENSODEG00000018267)	ENSODEG00000018308	LPCAT1 (ENSODEG00000018339)	SLC6A3 (ENSODEG00000018337)	CLPTM1L (ENSODEG00000018435)	TERT (ENSODEG00000018274)	SLC6A18 (ENSODEG00000018351)	SLC6A19 (ENSODEG00000018254)	SLC12A7 (ENSODEG00000018252)	NKD2 (ENSODEG00000018297)	TRIP13 (ENSODEG00000018401)	ENSODEG00000018289 ##22	ENSODEG00000018341	TPPP (ENSODEG00000018262)	CEP72 (ENSODEG00000018348)	SLC9A3 (ENSODEG00000018282)	EXOC3 (ENSODEG00000018394)	AHRR (ENSODEG00000018258)	ENSODEG00000018234	PDCD6 (ENSODEG00000018264)	SDHA (ENSODEG00000018317)	CCDC127 (ENSODEG00000018314)	LRRC14B (ENSODEG00000018256)	GLYCTK (ENSODEG00000018246)	WDR82 (ENSODEG00000018304)	PPM1M (ENSODEG00000018248)	TWF2 (ENSODEG00000018443)
Degu	MODERN SPECIES	170											TMEM161B (ENSODEG00000005530)	CCNH (ENSODEG00000005505)	RASA1 (ENSODEG00000005418)	ENSODEG00000019183	ENSODEG00000005383	ENSODEG00000005376 ##22	ENSODEG00000005359	EDIL3 (ENSODEG00000005260)	HAPLN1 (ENSODEG00000005201)	ENSODEG00000005176	ENSODEG00000005159	XRCC4 (ENSODEG00000005147)	ENSODEG00000005125	ENSODEG00000005103	RPS23 (ENSODEG00000005092)	ATG10 (ENSODEG00000005078)	SSBP2 (ENSODEG00000004975)	ACOT12 (ENSODEG00000004907)	ENSODEG00000004349	CKMT2 (ENSODEG00000004322)	RASGRF2 (ENSODEG00000004227)
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000038329	ENSHGLG00000034949	NDUFS6 (ENSHGLG00000004998)	ENSHGLG00000004189	LPCAT1 (ENSHGLG00000003422)	SLC6A3 (ENSHGLG00000006047)	ENSHGLG00000003913	CLPTM1L (ENSHGLG00000007809)	ENSHGLG00000049333	ENSHGLG00000006828	SLC6A18 (ENSHGLG00000005033)	SLC6A19 (ENSHGLG00000003886)	SLC12A7 (ENSHGLG00000003575)	ENSHGLG00000045939	TRIP13 (ENSHGLG00000009370)	BRD9 (ENSHGLG00000008352) ##22	ENSHGLG00000007391	ENSHGLG00000046861	TPPP (ENSHGLG00000046346)	SLC9A3 (ENSHGLG00000008808)	EXOC3 (ENSHGLG00000006821)	AHRR (ENSHGLG00000004877)	PDCD6 (ENSHGLG00000004728)	SDHA (ENSHGLG00000012160)	ENSHGLG00000018579	ENSHGLG00000018864	ENSHGLG00000039718	ENSHGLG00000006095	UCN3 (ENSHGLG00000007149)	ENSHGLG00000007795	ENSHGLG00000008802
Sciuridae	ANCESTRAL SPECIES	32	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Marmotini	ANCESTRAL SPECIES	75	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Marmotini_b	ANCESTRAL SPECIES	181				ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982.w	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Arctic ground squirrel	MODERN SPECIES	863													SLC12A7 (ENSUPAG00010020377)	NKD2 (ENSUPAG00010020397)	TRIP13 (ENSUPAG00010020420)	BRD9 (ENSUPAG00010020426) ##22	ENSUPAG00010020445
Squirrel	MODERN SPECIES	415				IRX4 (ENSSTOG00000019849)	NDUFS6 (ENSSTOG00000003715)	ENSSTOG00000031957	LPCAT1 (ENSSTOG00000027644)	SLC6A3 (ENSSTOG00000025968)	CLPTM1L (ENSSTOG00000004683)	TERT (ENSSTOG00000023072)	SLC6A18 (ENSSTOG00000024668)	SLC6A19 (ENSSTOG00000014810)	SLC12A7 (ENSSTOG00000027230)	NKD2 (ENSSTOG00000025001)	TRIP13 (ENSSTOG00000016032)	BRD9 (ENSSTOG00000026869) ##22	ENSSTOG00000023956	TPPP (ENSSTOG00000028319)	CEP72 (ENSSTOG00000009770)	SLC9A3 (ENSSTOG00000022373)	EXOC3 (ENSSTOG00000002915)	ENSSTOG00000019733	PDCD6 (ENSSTOG00000028872)	SDHA (ENSSTOG00000003740)	CCDC127 (ENSSTOG00000025952)	LRRC14B (ENSSTOG00000008872)	ENSSTOG00000031540
Alpin marmot	MODERN SPECIES	27	ADAMTS16 (ENSMMMG00000016445)	IRX1 (ENSMMMG00000016428)	IRX2 (ENSMMMG00000016418)	IRX4 (ENSMMMG00000016398)	NDUFS6 (ENSMMMG00000016391)	ENSMMMG00000016387	LPCAT1 (ENSMMMG00000016379)	SLC6A3 (ENSMMMG00000016359)	CLPTM1L (ENSMMMG00000016350)	TERT (ENSMMMG00000016292)	SLC6A18 (ENSMMMG00000016257)	SLC6A19 (ENSMMMG00000016250)	SLC12A7 (ENSMMMG00000016228)	NKD2 (ENSMMMG00000016197)	TRIP13 (ENSMMMG00000016193)	BRD9 (ENSMMMG00000016174) ##22	ENSMMMG00000016163	ENSMMMG00000016146	TPPP (ENSMMMG00000016142)	CEP72 (ENSMMMG00000016131)	SLC9A3 (ENSMMMG00000016064)	EXOC3 (ENSMMMG00000016061)	AHRR (ENSMMMG00000016051)	PDCD6 (ENSMMMG00000016043)	SDHA (ENSMMMG00000016022)	CCDC127 (ENSMMMG00000016016)	LRRC14B (ENSMMMG00000016008)	ENSMMMG00000016005
Eurasian red squirrel	MODERN SPECIES	15	IRX1 (ENSSVLG00005007138)	ENSSVLG00005007165	IRX2 (ENSSVLG00005007175)	IRX4 (ENSSVLG00005007188)	NDUFS6 (ENSSVLG00005007209)	ENSSVLG00005007224	ENSSVLG00005007261	SLC6A3 (ENSSVLG00005007330)	CLPTM1L (ENSSVLG00005007406)	TERT (ENSSVLG00005007516)	SLC6A18 (ENSSVLG00005007675)	SLC6A19 (ENSSVLG00005007759)	SLC12A7 (ENSSVLG00005007858)	NKD2 (ENSSVLG00005007994)	TRIP13 (ENSSVLG00005008053)	BRD9 (ENSSVLG00005008077) ##22	ENSSVLG00005008236	TPPP (ENSSVLG00005008280)	CEP72 (ENSSVLG00005008307)	SLC9A3 (ENSSVLG00005008403)	EXOC3 (ENSSVLG00005008659)	ENSSVLG00005008693	ENSSVLG00005008762	ENSSVLG00005008792	SDHA (ENSSVLG00005008902)	CCDC127 (ENSSVLG00005008989)	LRRC14B (ENSSVLG00005009009)	ENSSVLG00005009034	ENSSVLG00005009055
Lagomorpha	ANCESTRAL SPECIES	220															ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Rabbit	MODERN SPECIES	630															ENSOCUG00000006144	BRD9 (ENSOCUG00000010143) ##22	ENSOCUG00000022018	TPPP (ENSOCUG00000003048)	CEP72 (ENSOCUG00000002242)	SLC9A3 (ENSOCUG00000011055)	EXOC3 (ENSOCUG00000011043)	ENSOCUG00000021638	PDCD6 (ENSOCUG00000022971)	SDHA (ENSOCUG00000023573)	CCDC127 (ENSOCUG00000001605)	LRRC14B (ENSOCUG00000001603)	PLEKHG4B (ENSOCUG00000010749)
Pika	MODERN SPECIES	625															ENSOPRG00000007507	ENSOPRG00000007488 ##22
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000160429	ENSGT00390000002325	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	MODERN SPECIES	937	ADAMTS16 (ENSMLUG00000016787)	ENSMLUG00000028897	ENSMLUG00000030572	IRX2 (ENSMLUG00000002364)	ENSMLUG00000007563	NDUFS6 (ENSMLUG00000016888)	LPCAT1 (ENSMLUG00000015702)	SLC6A3 (ENSMLUG00000015691)	CLPTM1L (ENSMLUG00000012546)	TERT (ENSMLUG00000012533)	SLC6A18 (ENSMLUG00000012527)	SLC6A19 (ENSMLUG00000012517)	SLC12A7 (ENSMLUG00000004253)	NKD2 (ENSMLUG00000004247)	TRIP13 (ENSMLUG00000004237)	ENSMLUG00000004227 ##22	TPPP (ENSMLUG00000015232)	CEP72 (ENSMLUG00000015222)	SLC9A3 (ENSMLUG00000007140)	ENSMLUG00000012599	AHRR (ENSMLUG00000012589)	SDHA (ENSMLUG00000017004)	CCDC127 (ENSMLUG00000027087)	LRRC14B (ENSMLUG00000016995)	PLEKHG4B (ENSMLUG00000016985)	PDE4D (ENSMLUG00000016574)	ENSMLUG00000016936	DEPDC1B (ENSMLUG00000014865)	ELOVL7 (ENSMLUG00000011604)	ENSMLUG00000024960	ERCC8 (ENSMLUG00000007222)
Microbat	MODERN SPECIES	1153								NR2E1 (ENSMLUG00000005543)	OSTM1 (ENSMLUG00000005540)	ENSMLUG00000030351	SEC63 (ENSMLUG00000005529)	SCML4 (ENSMLUG00000005526)	SOBP (ENSMLUG00000029995)	PDSS2 (ENSMLUG00000002328)	BEND3 (ENSMLUG00000002324)	ENSMLUG00000002326 ##22	MTRES1 (ENSMLUG00000009524)	QRSL1 (ENSMLUG00000025602)	RTN4IP1 (ENSMLUG00000002947)	CRYBG1 (ENSMLUG00000002929)	ATG5 (ENSMLUG00000014090)	PRDM1 (ENSMLUG00000014085)
Microbat	MODERN SPECIES	1357	ENSMLUG00000005336	NUMBL (ENSMLUG00000000395)	COQ8B (ENSMLUG00000000210)	ITPKC (ENSMLUG00000000215)	ACTMAP (ENSMLUG00000000217)	SNRPA (ENSMLUG00000000219)	MIA (ENSMLUG00000026397)	RAB4B (ENSMLUG00000030110)	EGLN2 (ENSMLUG00000000224)	ENSMLUG00000026190	ENSMLUG00000011027	ENSMLUG00000023314	ENSMLUG00000027238	ENSMLUG00000007247	CYP2B6 (ENSMLUG00000028590)	ENSMLUG00000009670 ##22	CYP2S1 (ENSMLUG00000013059)	AXL (ENSMLUG00000013069)	HNRNPUL1 (ENSMLUG00000013084)	CCDC97 (ENSMLUG00000023105)	TGFB1 (ENSMLUG00000013098)	B9D2 (ENSMLUG00000023056)	EXOSC5 (ENSMLUG00000013104)	BCKDHA (ENSMLUG00000007821)	B3GNT8 (ENSMLUG00000007859)	DMAC2 (ENSMLUG00000025213)	ENSMLUG00000023690	ENSMLUG00000028687
Greater horseshoe bat	MODERN SPECIES	25	ENSRFEG00010002345	ENSRFEG00010002333	IRX2 (ENSRFEG00010002308)	IRX4 (ENSRFEG00010002288)	NDUFS6 (ENSRFEG00010002276)	MRPL36 (ENSRFEG00010002262)	LPCAT1 (ENSRFEG00010002236)	SLC6A3 (ENSRFEG00010002207)	CLPTM1L (ENSRFEG00010002171)	TERT (ENSRFEG00010002119)	SLC6A18 (ENSRFEG00010001792)	SLC6A19 (ENSRFEG00010001577)	SLC12A7 (ENSRFEG00010001460)	NKD2 (ENSRFEG00010001407)	TRIP13 (ENSRFEG00010001385)	BRD9 (ENSRFEG00010001284) ##22	TPPP (ENSRFEG00010001251)	CEP72 (ENSRFEG00010001216)	SLC9A3 (ENSRFEG00010001146)	EXOC3 (ENSRFEG00010001107)	AHRR (ENSRFEG00010001066)	ENSRFEG00010000946	SDHA (ENSRFEG00010000818)	CCDC127 (ENSRFEG00010000786)	LRRC14B (ENSRFEG00010000773)	PLEKHG4B (ENSRFEG00010000694)
Megabat	MODERN SPECIES	257																BRD9 (ENSPVAG00000001419) ##22
Equus	ANCESTRAL SPECIES	23	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Donkey	MODERN SPECIES	1	ADAMTS16 (ENSEASG00005018564)	IRX1 (ENSEASG00005018560)	IRX2 (ENSEASG00005018557)	IRX4 (ENSEASG00005018554)	NDUFS6 (ENSEASG00005023604)	ENSEASG00005036706	LPCAT1 (ENSEASG00005032107)	SLC6A3 (ENSEASG00005018547)	CLPTM1L (ENSEASG00005018545)	TERT (ENSEASG00005018543)	SLC6A18 (ENSEASG00005018374)	SLC6A19 (ENSEASG00005018308)	SLC12A7 (ENSEASG00005018301)	NKD2 (ENSEASG00005018295)	TRIP13 (ENSEASG00005018251)	BRD9 (ENSEASG00005018145) ##22	ENSEASG00005018131	TPPP (ENSEASG00005029304)	CEP72 (ENSEASG00005018122)	SLC9A3 (ENSEASG00005018117)	EXOC3 (ENSEASG00005018109)	AHRR (ENSEASG00005018098)	PDCD6 (ENSEASG00005034813)	SDHA (ENSEASG00005018069)	CCDC127 (ENSEASG00005028230)	LRRC14B (ENSEASG00005018059)	ENSEASG00005018040
Horse	MODERN SPECIES	13	IRX1 (ENSECAG00000015273)	IRX2 (ENSECAG00000015758)	IRX4 (ENSECAG00000017403)	NDUFS6 (ENSECAG00000021690)	MRPL36 (ENSECAG00000001222)	LPCAT1 (ENSECAG00000021716)	SLC6A3 (ENSECAG00000024615)	ENSECAG00000058649	CLPTM1L (ENSECAG00000013231)	TERT (ENSECAG00000001347)	SLC6A18 (ENSECAG00000014930)	SLC6A19 (ENSECAG00000015357)	SLC12A7 (ENSECAG00000009911)	NKD2 (ENSECAG00000016907)	TRIP13 (ENSECAG00000018918)	BRD9 (ENSECAG00000013115) ##22	ENSECAG00000055422	ENSECAG00000019107	TPPP (ENSECAG00000019638)	CEP72 (ENSECAG00000021103)	SLC9A3 (ENSECAG00000023335)	EXOC3 (ENSECAG00000010149)	AHRR (ENSECAG00000017812)	PDCD6 (ENSECAG00000021111)	SDHA (ENSECAG00000000397)	CCDC127 (ENSECAG00000001898)	LRRC14B (ENSECAG00000001935)	PLEKHG4B (ENSECAG00000002249)
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Canidae	ANCESTRAL SPECIES	62	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Canis_lupus	ANCESTRAL SPECIES	49	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT00390000010779.a.b.b.e.b.a	ENSGT01030000234531.C	ENSGT00940000162507.A
Dog	MODERN SPECIES	27	ADAMTS16 (ENSCAFG00845024365)	IRX1 (ENSCAFG00845024655)	IRX2 (ENSCAFG00845024864)	IRX4 (ENSCAFG00845024941)	ENSCAFG00845024996	MRPL36 (ENSCAFG00845025034)	LPCAT1 (ENSCAFG00845025093)	SLC6A3 (ENSCAFG00845025384)	CLPTM1L (ENSCAFG00845025532)	TERT (ENSCAFG00845025817)	SLC6A18 (ENSCAFG00845026287)	SLC6A19 (ENSCAFG00845026397)	SLC12A7 (ENSCAFG00845026600)	NKD2 (ENSCAFG00845027016)	TRIP13 (ENSCAFG00845027144)	BRD9 (ENSCAFG00845027387) ##22	ENSCAFG00845027566	CEP72 (ENSCAFG00845027639)	SLC9A3 (ENSCAFG00845027782)	EXOC3 (ENSCAFG00845027965)	AHRR (ENSCAFG00845014897)	PDCD6 (ENSCAFG00845014967)	SDHA (ENSCAFG00845015100)	CCDC127 (ENSCAFG00845015192)	ENSCAFG00845015223	LRRC14B (ENSCAFG00845015253)	ENSCAFG00845015302	ENSCAFG00845015451	ENSCAFG00845015500	ENSCAFG00845015527	PIK3CA (ENSCAFG00845015587)
Dingo	MODERN SPECIES	159	ADAMTS16 (ENSCAFG00020022881)	IRX1 (ENSCAFG00020022891)	IRX2 (ENSCAFG00020022893)	IRX4 (ENSCAFG00020022896)	NDUFS6 (ENSCAFG00020022900)	MRPL36 (ENSCAFG00020022901)	LPCAT1 (ENSCAFG00020022903)	SLC6A3 (ENSCAFG00020022906)	CLPTM1L (ENSCAFG00020022917)	TERT (ENSCAFG00020022919)	SLC6A18 (ENSCAFG00020022926)	SLC6A19 (ENSCAFG00020023014)	SLC12A7 (ENSCAFG00020023026)	NKD2 (ENSCAFG00020023031)	TRIP13 (ENSCAFG00020023035)	BRD9 (ENSCAFG00020023040) ##22	ENSCAFG00020023045	ENSCAFG00020023043	TPPP (ENSCAFG00020023047)	CEP72 (ENSCAFG00020023049)	SLC9A3 (ENSCAFG00020023055)	EXOC3 (ENSCAFG00020023060)	AHRR (ENSCAFG00020023063)	ENSCAFG00020023068	ENSCAFG00020023071	SDHA (ENSCAFG00020023074)	CCDC127 (ENSCAFG00020023080)	ENSCAFG00020023082	LRRC14B (ENSCAFG00020023084)	PLEKHG4B (ENSCAFG00020023087)	ENSCAFG00020023098
Red fox	MODERN SPECIES	162	ENSVVUG00000022447	ADAMTS16 (ENSVVUG00000022388)	IRX2 (ENSVVUG00000022361)	IRX4 (ENSVVUG00000022348)	ENSVVUG00000022342	ENSVVUG00000022337	LPCAT1 (ENSVVUG00000022326)	SLC6A3 (ENSVVUG00000022318)	ENSVVUG00000022302	TERT (ENSVVUG00000022219)	SLC6A18 (ENSVVUG00000022215)	SLC6A19 (ENSVVUG00000022214)	SLC12A7 (ENSVVUG00000022193)	NKD2 (ENSVVUG00000022191)	TRIP13 (ENSVVUG00000022187)	BRD9 (ENSVVUG00000022181) ##22	ENSVVUG00000022177	TPPP (ENSVVUG00000022176)	CEP72 (ENSVVUG00000022173)	SLC9A3 (ENSVVUG00000022048)	EXOC3 (ENSVVUG00000022015)	AHRR (ENSVVUG00000022010)	ENSVVUG00000022006	ENSVVUG00000022002	ENSVVUG00000022001	SDHA (ENSVVUG00000021998)	CCDC127 (ENSVVUG00000021997)	LRRC14B (ENSVVUG00000021994)	PLEKHG4B (ENSVVUG00000021986)	ENSVVUG00000021984	ENSVVUG00000021982
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Ursidae	ANCESTRAL SPECIES	24	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Ursus	ANCESTRAL SPECIES	114	ENSGT00940000161612	ENSGT00940000166335	ENSGT00950000183199.b	ENSGT00940000159433	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
American black bear	MODERN SPECIES	3651													SLC12A7 (ENSUAMG00000015083)	NKD2 (ENSUAMG00000015066)	TRIP13 (ENSUAMG00000015064)	BRD9 (ENSUAMG00000014957) ##22	ENSUAMG00000014946
Polar bear	MODERN SPECIES	324	SRD5A1 (ENSUMAG00000021097)	NSUN2 (ENSUMAG00000021149)	ENSUMAG00000021395	ICE1 (ENSUMAG00000021400)	ADAMTS16 (ENSUMAG00000021427)	ENSUMAG00000021508	ENSUMAG00000021510	LPCAT1 (ENSUMAG00000021535)	SLC6A3 (ENSUMAG00000021572)	CLPTM1L (ENSUMAG00000021602)	SLC6A18 (ENSUMAG00000021793)	SLC6A19 (ENSUMAG00000021799)	SLC12A7 (ENSUMAG00000021868)	ENSUMAG00000022013	TRIP13 (ENSUMAG00000022041)	BRD9 (ENSUMAG00000022112) ##22	ENSUMAG00000022124	TPPP (ENSUMAG00000022129)	CEP72 (ENSUMAG00000022135)	SLC9A3 (ENSUMAG00000022137)	EXOC3 (ENSUMAG00000022153)	ENSUMAG00000022156	ENSUMAG00000022162	PDCD6 (ENSUMAG00000022171)	SDHA (ENSUMAG00000022271)	ENSUMAG00000022591	CCDC127 (ENSUMAG00000022596)	LRRC14B (ENSUMAG00000022599)	PLEKHG4B (ENSUMAG00000022613)
Giant Panda	MODERN SPECIES	13	SRD5A1 (ENSAMEG00000002796)	NSUN2 (ENSAMEG00000002744)	ICE1 (ENSAMEG00000005383)	ENSAMEG00000005402	IRX1 (ENSAMEG00000001629)	IRX2 (ENSAMEG00000030165)	IRX4 (ENSAMEG00000010933)	NDUFS6 (ENSAMEG00000010930)	LPCAT1 (ENSAMEG00000010885)	SLC6A3 (ENSAMEG00000010690)	CLPTM1L (ENSAMEG00000010640)	TERT (ENSAMEG00000010578)	SLC6A18 (ENSAMEG00000010403)	ENSAMEG00000010356	ENSAMEG00000008267	BRD9 (ENSAMEG00000008289) ##22	ENSAMEG00000029733	ENSAMEG00000008326	CEP72 (ENSAMEG00000008333)	SLC9A3 (ENSAMEG00000008339)	EXOC3 (ENSAMEG00000008403)	AHRR (ENSAMEG00000008443)	PDCD6 (ENSAMEG00000008464)	SDHA (ENSAMEG00000008480)	ENSAMEG00000027043	CCDC127 (ENSAMEG00000008532)	LRRC14B (ENSAMEG00000008539)	ENSAMEG00000008542
Mustelinae	ANCESTRAL SPECIES	127	ENSGT00390000014501	ENSGT00950000183199.b	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
American mink	MODERN SPECIES	131	ADAMTS16 (ENSNVIG00000000104)	IRX1 (ENSNVIG00000000063)	ENSNVIG00000000020	IRX2 (ENSNVIG00000000014)	IRX4 (ENSNVIG00000024384)	NDUFS6 (ENSNVIG00000024379)	LPCAT1 (ENSNVIG00000024375)	SLC6A3 (ENSNVIG00000024373)	CLPTM1L (ENSNVIG00000024366)	TERT (ENSNVIG00000024328)	SLC6A18 (ENSNVIG00000024290)	SLC6A19 (ENSNVIG00000024286)	SLC12A7 (ENSNVIG00000022621)	ENSNVIG00000022473	TRIP13 (ENSNVIG00000022459)	BRD9 (ENSNVIG00000022450) ##22	ENSNVIG00000022438	TPPP (ENSNVIG00000022432)	CEP72 (ENSNVIG00000022425)	SLC9A3 (ENSNVIG00000022416)	EXOC3 (ENSNVIG00000022384)	ENSNVIG00000022379	ENSNVIG00000022374	PDCD6 (ENSNVIG00000022350)	SDHA (ENSNVIG00000022331)	CCDC127 (ENSNVIG00000022321)	LRRC14B (ENSNVIG00000022319)	ENSNVIG00000022309
Ferret	MODERN SPECIES	296	ENSMPUG00000007644	IRX2 (ENSMPUG00000007647)	IRX4 (ENSMPUG00000007656)	ENSMPUG00000019810	LPCAT1 (ENSMPUG00000007662)	SLC6A3 (ENSMPUG00000007672)	ENSMPUG00000008903	CLPTM1L (ENSMPUG00000008908)	TERT (ENSMPUG00000008917)	SLC6A18 (ENSMPUG00000008930)	SLC6A19 (ENSMPUG00000008940)	ENSMPUG00000009276	SLC12A7 (ENSMPUG00000009280)	ENSMPUG00000019812	TRIP13 (ENSMPUG00000010073)	BRD9 (ENSMPUG00000010082) ##22	ENSMPUG00000010149	TPPP (ENSMPUG00000010167)	CEP72 (ENSMPUG00000010195)	ENSMPUG00000010213	SLC9A3 (ENSMPUG00000010219)	EXOC3 (ENSMPUG00000010237)	AHRR (ENSMPUG00000010246)	PDCD6 (ENSMPUG00000010275)	SDHA (ENSMPUG00000010324)	ENSMPUG00000010331	CCDC127 (ENSMPUG00000010335)	LRRC14B (ENSMPUG00000010342)	ENSMPUG00000010345
Felidae	ANCESTRAL SPECIES	6	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896.e	ENSGT00940000154896.f	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.g.a	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Panthera	ANCESTRAL SPECIES	6	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896.e	ENSGT00940000154896.f	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.g.a	ENSGT00940000153875.c.n	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00390000002752.w.a.a	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896.e	ENSGT00940000154896.f	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608.g.a	ENSGT00940000153875.c.n	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00390000002752.w.a.a	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
lion	MODERN SPECIES		IRX1 (ENSPLOG00000003994)	ENSPLOG00000003986	IRX2 (ENSPLOG00000003976)	IRX4 (ENSPLOG00000003963)	NDUFS6 (ENSPLOG00000003955)	ENSPLOG00000003949	LPCAT1 (ENSPLOG00000003938)	SLC6A3 (ENSPLOG00000003913)	CLPTM1L (ENSPLOG00000003877)	TERT (ENSPLOG00000003847)	SLC6A18 (ENSPLOG00000003576)	SLC6A19 (ENSPLOG00000003408)	SLC12A7 (ENSPLOG00000003362)	NKD2 (ENSPLOG00000003335)	TRIP13 (ENSPLOG00000003312)	BRD9 (ENSPLOG00000003277) ##22	ENSPLOG00000003257	TPPP (ENSPLOG00000003226)	CEP72 (ENSPLOG00000003205)	SLC9A3 (ENSPLOG00000003168)	EXOC3 (ENSPLOG00000003127)	ENSPLOG00000003084	ENSPLOG00000003112	PDCD6 (ENSPLOG00000003034)	ENSPLOG00000002995	SDHA (ENSPLOG00000002936)	CCDC127 (ENSPLOG00000002900)	LRRC14B (ENSPLOG00000002884)	PLEKHG4B (ENSPLOG00000002803)
leopard	MODERN SPECIES	228												ENSPPRG00000001565	SLC12A7 (ENSPPRG00000001609)	NKD2 (ENSPPRG00000001801)	TRIP13 (ENSPPRG00000001817)	BRD9 (ENSPPRG00000002004) ##22	ENSPPRG00000002044	TPPP (ENSPPRG00000002056)	CEP72 (ENSPPRG00000002120)	SLC9A3 (ENSPPRG00000002356)	EXOC3 (ENSPPRG00000002370)	AHRR (ENSPPRG00000002696)	ENSPPRG00000002870	ENSPPRG00000002949	SDHA (ENSPPRG00000003291)	CCDC127 (ENSPPRG00000003413)	LRRC14B (ENSPPRG00000003472)	PLEKHG4B (ENSPPRG00000003599)
Tiger	MODERN SPECIES	509												ENSPTIG00000006453	SLC12A7 (ENSPTIG00000005358)	ENSPTIG00000004749	TRIP13 (ENSPTIG00000002005)	BRD9 (ENSPTIG00000020502) ##22
Cat	MODERN SPECIES		IRX1 (ENSFCAG00000036923)	ENSFCAG00000044678	IRX2 (ENSFCAG00000040664)	IRX4 (ENSFCAG00000022359)	NDUFS6 (ENSFCAG00000033856)	ENSFCAG00000026326	LPCAT1 (ENSFCAG00000000783)	SLC6A3 (ENSFCAG00000002581)	CLPTM1L (ENSFCAG00000009544)	TERT (ENSFCAG00000009543)	SLC6A18 (ENSFCAG00000009542)	SLC6A19 (ENSFCAG00000009541)	SLC12A7 (ENSFCAG00000009540)	NKD2 (ENSFCAG00000029202)	TRIP13 (ENSFCAG00000009538)	BRD9 (ENSFCAG00000009535) ##22	ENSFCAG00000009537	TPPP (ENSFCAG00000041042)	CEP72 (ENSFCAG00000002925)	SLC9A3 (ENSFCAG00000015433)	EXOC3 (ENSFCAG00000015431)	AHRR (ENSFCAG00000015430)	ENSFCAG00000047255	PDCD6 (ENSFCAG00000041352)	SDHA (ENSFCAG00000030558)	ENSFCAG00000034012	CCDC127 (ENSFCAG00000027428)	LRRC14B (ENSFCAG00000008034)	PLEKHG4B (ENSFCAG00000008030)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Suina	ANCESTRAL SPECIES	25	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00960000191710	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Pig	MODERN SPECIES	7	ADAMTS16 (ENSSSCG00000017109)	IRX1 (ENSSSCG00000034884)	IRX2 (ENSSSCG00000032074)	IRX4 (ENSSSCG00000017112)	NDUFS6 (ENSSSCG00000017114)	MRPL36 (ENSSSCG00000040154)	LPCAT1 (ENSSSCG00000017116)	SLC6A3 (ENSSSCG00000017121)	CLPTM1L (ENSSSCG00000017119)	TERT (ENSSSCG00000017118)	SLC6A18 (ENSSSCG00000017117)	SLC6A19 (ENSSSCG00000017120)	SLC12A7 (ENSSSCG00000034302)	NKD2 (ENSSSCG00000055161)	TRIP13 (ENSSSCG00000034522)	BRD9 (ENSSSCG00000035118) ##22	ENSSSCG00000040193	TPPP (ENSSSCG00000032698)	ENSSSCG00000031800	SLC9A3 (ENSSSCG00000039413)	EXOC3 (ENSSSCG00000039607)	AHRR (ENSSSCG00000032843)	PDCD6 (ENSSSCG00000032090)	SDHA (ENSSSCG00000020686)	CCDC127 (ENSSSCG00000036783)	LRRC14B (ENSSSCG00000033375)	ENSSSCG00000039089
Chacoan peccary	MODERN SPECIES	767													SLC12A7 (ENSCWAG00000004297)	NKD2 (ENSCWAG00000010986)	TRIP13 (ENSCWAG00000011017)	BRD9 (ENSCWAG00000011077) ##22	ENSCWAG00000011210
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Camelidae	ANCESTRAL SPECIES	1	ENSGT00940000159433	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Arabian camel	MODERN SPECIES	22	ENSCDRG00005004962	ENSCDRG00005005061	IRX2 (ENSCDRG00005005106)	IRX4 (ENSCDRG00005005132)	NDUFS6 (ENSCDRG00005006367)	MRPL36 (ENSCDRG00005006409)	LPCAT1 (ENSCDRG00005006427)	SLC6A3 (ENSCDRG00005006584)	CLPTM1L (ENSCDRG00005006937)	TERT (ENSCDRG00005007091)	SLC6A18 (ENSCDRG00005007426)	SLC6A19 (ENSCDRG00005007586)	SLC12A7 (ENSCDRG00005007851)	NKD2 (ENSCDRG00005013068)	TRIP13 (ENSCDRG00005013214)	BRD9 (ENSCDRG00005013313) ##22	ENSCDRG00005013501	TPPP (ENSCDRG00005013597)	CEP72 (ENSCDRG00005013654)	SLC9A3 (ENSCDRG00005013790)	EXOC3 (ENSCDRG00005013917)	ENSCDRG00005014008	ENSCDRG00005014135	PDCD6 (ENSCDRG00005014172)	SDHA (ENSCDRG00005014763)	CCDC127 (ENSCDRG00005015184)	LRRC14B (ENSCDRG00005015203)	ENSCDRG00005015248	ENSCDRG00005015399
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Bovidae	ANCESTRAL SPECIES	26	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Bovinae	ANCESTRAL SPECIES	25	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Bos	ANCESTRAL SPECIES	26	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Bos_b	ANCESTRAL SPECIES	29	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657.e	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Hybrid Bos Indicus	MODERN SPECIES	12	IRX2 (ENSBIXG00005027442)	ENSBIXG00005027401	IRX4 (ENSBIXG00005027355)	NDUFS6 (ENSBIXG00005004700)	ENSBIXG00005027272	LPCAT1 (ENSBIXG00005027232)	SLC6A3 (ENSBIXG00005004683)	CLPTM1L (ENSBIXG00005006940)	TERT (ENSBIXG00005004650)	SLC6A18 (ENSBIXG00005026953)	SLC6A19 (ENSBIXG00005026916)	SLC12A7 (ENSBIXG00005026843)	ENSBIXG00005026742	NKD2 (ENSBIXG00005026692)	TRIP13 (ENSBIXG00005026642)	BRD9 (ENSBIXG00005026623) ##22	ENSBIXG00005004543	CEP72 (ENSBIXG00005004540)	SLC9A3 (ENSBIXG00005004537)	EXOC3 (ENSBIXG00005026512)	ENSBIXG00005005569	ENSBIXG00005007248	ENSBIXG00005007641	SDHA (ENSBIXG00005026296)	CCDC127 (ENSBIXG00005026035)	LRRC14B (ENSBIXG00005026009)
Cow	MODERN SPECIES	12	IRX2 (ENSBTAG00000047499)	ENSBTAG00000054006	IRX4 (ENSBTAG00000015907)	NDUFS6 (ENSBTAG00000009914)	ENSBTAG00000050317	LPCAT1 (ENSBTAG00000000944)	SLC6A3 (ENSBTAG00000015843)	CLPTM1L (ENSBTAG00000001329)	TERT (ENSBTAG00000012567)	SLC6A18 (ENSBTAG00000012559)	SLC6A19 (ENSBTAG00000045695)	ENSBTAG00000049547	SLC12A7 (ENSBTAG00000006775)	NKD2 (ENSBTAG00000034435)	TRIP13 (ENSBTAG00000006972)	BRD9 (ENSBTAG00000006971) ##22	ENSBTAG00000054687	TPPP (ENSBTAG00000052247)	CEP72 (ENSBTAG00000011405)	SLC9A3 (ENSBTAG00000004629)	EXOC3 (ENSBTAG00000008606)	ENSBTAG00000026527	AHRR (ENSBTAG00000052375)	PDCD6 (ENSBTAG00000046493)	SDHA (ENSBTAG00000046019)	LRRC14B (ENSBTAG00000045954)	CCDC127 (ENSBTAG00000047780)	ENSBTAG00000055240	ENSBTAG00000048135	ENSBTAG00000047700	ENSBTAG00000047632
Bos_a	ANCESTRAL SPECIES	38	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Wild yak	MODERN SPECIES	672													SLC12A7 (ENSBMUG00000011790)	ENSBMUG00000012588	TRIP13 (ENSBMUG00000012594)	BRD9 (ENSBMUG00000012735) ##22	ENSBMUG00000012770	TPPP (ENSBMUG00000012805)	CEP72 (ENSBMUG00000012822)	SLC9A3 (ENSBMUG00000012857)	EXOC3 (ENSBMUG00000012896)	ENSBMUG00000012917	ENSBMUG00000012934	PDCD6 (ENSBMUG00000013029)	SDHA (ENSBMUG00000013147)	CCDC127 (ENSBMUG00000013178)	LRRC14B (ENSBMUG00000013225)
American bison	MODERN SPECIES	3291	TENT4A (ENSBBBG00000016484)	NSUN2 (ENSBBBG00000016571)	MED10 (ENSBBBG00000000761)	ENSBBBG00000000745	ENSBBBG00000000735	ADAMTS16 (ENSBBBG00000004110)	NDUFS6 (ENSBBBG00000016621)	ENSBBBG00000004122	LPCAT1 (ENSBBBG00000016651)	SLC6A3 (ENSBBBG00000016720)	CLPTM1L (ENSBBBG00000016737)	SLC6A18 (ENSBBBG00000000711)	SLC6A19 (ENSBBBG00000016767)	SLC12A7 (ENSBBBG00000008296)	TRIP13 (ENSBBBG00000016892)	BRD9 (ENSBBBG00000016929) ##22	ENSBBBG00000004187	TPPP (ENSBBBG00000016941)	CEP72 (ENSBBBG00000004199)	SLC9A3 (ENSBBBG00000017032)	EXOC3 (ENSBBBG00000017105)	ENSBBBG00000004236
Caprinae	ANCESTRAL SPECIES	24	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C
Rambouillet Sheep	MODERN SPECIES	7	ICE1 (ENSOARG00020023470)	ADAMTS16 (ENSOARG00020023792)	IRX1 (ENSOARG00020023933)	IRX2 (ENSOARG00020023975)	IRX4 (ENSOARG00020010022)	NDUFS6 (ENSOARG00020010127)	ENSOARG00020010180	LPCAT1 (ENSOARG00020010211)	SLC6A3 (ENSOARG00020010397)	CLPTM1L (ENSOARG00020010550)	TERT (ENSOARG00020010728)	SLC6A18 (ENSOARG00020011151)	SLC6A19 (ENSOARG00020012724)	SLC12A7 (ENSOARG00020012793)	TRIP13 (ENSOARG00020013528)	BRD9 (ENSOARG00020013591) ##22	ENSOARG00020013861	TPPP (ENSOARG00020013938)	SLC9A3 (ENSOARG00020014019)	EXOC3 (ENSOARG00020014305)	ENSOARG00020014523	CCDC127 (ENSOARG00020014783)	LRRC14B (ENSOARG00020014808)
Goat	MODERN SPECIES	12	SRD5A1 (ENSCHIG00000012029)	NSUN2 (ENSCHIG00000019385)	UBE2QL1 (ENSCHIG00000002861)	MED10 (ENSCHIG00000020899)	ICE1 (ENSCHIG00000024007)	ADAMTS16 (ENSCHIG00000010517)	IRX1 (ENSCHIG00000017851)	IRX2 (ENSCHIG00000011251)	IRX4 (ENSCHIG00000023690)	NDUFS6 (ENSCHIG00000020281)	LPCAT1 (ENSCHIG00000008758)	SLC6A3 (ENSCHIG00000021410)	SLC12A7 (ENSCHIG00000018789)	NKD2 (ENSCHIG00000022698)	TRIP13 (ENSCHIG00000022332)	BRD9 (ENSCHIG00000015801) ##22	TERT (ENSCHIG00000008229)	SLC6A18 (ENSCHIG00000017593)	SLC6A19 (ENSCHIG00000009247)	TPPP (ENSCHIG00000012981)	CEP72 (ENSCHIG00000015774)	SLC9A3 (ENSCHIG00000021090)	EXOC3 (ENSCHIG00000013133)	AHRR (ENSCHIG00000008715)	ENSCHIG00000008009	SDHA (ENSCHIG00000017916)	CCDC127 (ENSCHIG00000024092)	LRRC14B (ENSCHIG00000006964)
Siberian musk deer	MODERN SPECIES	1236													SLC12A7 (ENSMMSG00000018027)	NKD2 (ENSMMSG00000017975)	TRIP13 (ENSMMSG00000017904)	BRD9 (ENSMMSG00000017786) ##22	ENSMMSG00000017745	TPPP (ENSMMSG00000017724)	CEP72 (ENSMMSG00000017699)	SLC9A3 (ENSMMSG00000017552)	EXOC3 (ENSMMSG00000017515)	ENSMMSG00000017434	ENSMMSG00000017497	ENSMMSG00000017351	SDHA (ENSMMSG00000017165)	CCDC127 (ENSMMSG00000017129)	LRRC14B (ENSMMSG00000021758)
Yarkand deer	MODERN SPECIES	299																BRD9 (ENSCHYG00000011101) ##22
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c.i	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c.i	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Dolphin	MODERN SPECIES	6438															TRIP13 (ENSTTRG00000008987)	BRD9 (ENSTTRG00000008996) ##22
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c.i	ENSGT01010000226625	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000160429	ENSGT00990000208225	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a	ENSGT00940000161224	ENSGT00530000063461.A	ENSGT00390000018531	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00440000033589.d	ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000161608	ENSGT00940000153875.c.i	ENSGT01010000226625	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Narwhal	MODERN SPECIES	298	IRX1 (ENSMMNG00015005292)	ENSMMNG00015005274	IRX2 (ENSMMNG00015005260)	IRX4 (ENSMMNG00015005245)	NDUFS6 (ENSMMNG00015005230)	MRPL36 (ENSMMNG00015005219)	LPCAT1 (ENSMMNG00015005202)	SLC6A3 (ENSMMNG00015005189)	CLPTM1L (ENSMMNG00015005167)	TERT (ENSMMNG00015005153)	SLC6A18 (ENSMMNG00015005126)	SLC6A19 (ENSMMNG00015005102)	SLC12A7 (ENSMMNG00015005066)	NKD2 (ENSMMNG00015005039)	TRIP13 (ENSMMNG00015005029)	BRD9 (ENSMMNG00015005011) ##22	ENSMMNG00015005004	ENSMMNG00015005002	ENSMMNG00015004998	SLC9A3 (ENSMMNG00015004984)	EXOC3 (ENSMMNG00015004969)	ENSMMNG00015004962	ENSMMNG00015004957	PDCD6 (ENSMMNG00015004944)	SDHA (ENSMMNG00015004909)	CCDC127 (ENSMMNG00015004898)	LRRC14B (ENSMMNG00015004895)	ENSMMNG00015004890	SAMD11 (ENSMMNG00015004852)	NOC2L (ENSMMNG00015004830)	KLHL17 (ENSMMNG00015004826)
Beluga whale	MODERN SPECIES	16	ADAMTS16 (ENSDLEG00000000178)	IRX1 (ENSDLEG00000003895)	IRX2 (ENSDLEG00000003871)	IRX4 (ENSDLEG00000003849)	NDUFS6 (ENSDLEG00000003836)	ENSDLEG00000003825	LPCAT1 (ENSDLEG00000003802)	SLC6A3 (ENSDLEG00000003787)	CLPTM1L (ENSDLEG00000003766)	TERT (ENSDLEG00000003731)	SLC6A18 (ENSDLEG00000003661)	SLC6A19 (ENSDLEG00000003586)	SLC12A7 (ENSDLEG00000003522)	NKD2 (ENSDLEG00000003494)	TRIP13 (ENSDLEG00000003445)	BRD9 (ENSDLEG00000003425) ##22	ENSDLEG00000003387	TPPP (ENSDLEG00000003365)	ENSDLEG00000003360	SLC9A3 (ENSDLEG00000003234)	EXOC3 (ENSDLEG00000003162)	ENSDLEG00000003124	ENSDLEG00000003116	PDCD6 (ENSDLEG00000003011)	SDHA (ENSDLEG00000002984)	CCDC127 (ENSDLEG00000002972)	LRRC14B (ENSDLEG00000002966)	ENSDLEG00000002944
Vaquita	MODERN SPECIES	14	IRX1 (ENSPSNG00000002005)	ENSPSNG00000002036	IRX2 (ENSPSNG00000002053)	IRX4 (ENSPSNG00000002071)	NDUFS6 (ENSPSNG00000002096)	ENSPSNG00000002113	LPCAT1 (ENSPSNG00000002146)	SLC6A3 (ENSPSNG00000002215)	CLPTM1L (ENSPSNG00000002275)	TERT (ENSPSNG00000002372)	SLC6A18 (ENSPSNG00000002444)	SLC6A19 (ENSPSNG00000002478)	SLC12A7 (ENSPSNG00000002551)	NKD2 (ENSPSNG00000002651)	TRIP13 (ENSPSNG00000002688)	BRD9 (ENSPSNG00000002727) ##22	ENSPSNG00000002768	ENSPSNG00000002786	ENSPSNG00000002800	SLC9A3 (ENSPSNG00000002835)	EXOC3 (ENSPSNG00000002905)	AHRR (ENSPSNG00000002943)	PDCD6 (ENSPSNG00000002976)	SDHA (ENSPSNG00000003340)	CCDC127 (ENSPSNG00000003775)	LRRC14B (ENSPSNG00000003799)
Sperm whale	MODERN SPECIES	19	IRX1 (ENSPCTG00005001645)	ENSPCTG00005001636	ENSPCTG00005001625	IRX2 (ENSPCTG00005001610)	IRX4 (ENSPCTG00005001592)	NDUFS6 (ENSPCTG00005001580)	MRPL36 (ENSPCTG00005001573)	LPCAT1 (ENSPCTG00005001554)	SLC6A3 (ENSPCTG00005001531)	CLPTM1L (ENSPCTG00005001495)	TERT (ENSPCTG00005001408)	SLC6A19 (ENSPCTG00005001357)	SLC12A7 (ENSPCTG00005001313)	NKD2 (ENSPCTG00005001284)	TRIP13 (ENSPCTG00005001243)	BRD9 (ENSPCTG00005001199) ##22	ENSPCTG00005001162	TPPP (ENSPCTG00005001138)	SLC9A3 (ENSPCTG00005001031)	EXOC3 (ENSPCTG00005000986)	AHRR (ENSPCTG00005000954)	PDCD6 (ENSPCTG00005000919)	SDHA (ENSPCTG00005000654)	CCDC127 (ENSPCTG00005000571)	LRRC14B (ENSPCTG00005000554)	ENSPCTG00005000466 #26	PRMT2 (ENSPCTG00005000392) #25	S100B (ENSPCTG00005020925) #24	DIP2A (ENSPCTG00005020857) #23	ENSPCTG00005020792 #21	YBEY (ENSPCTG00005020716) #22
Blue whale	MODERN SPECIES	14	ENSBMSG00010014609	IRX2 (ENSBMSG00010014578)	ENSBMSG00010014549	ENSBMSG00010014531	NDUFS6 (ENSBMSG00010014513)	MRPL36 (ENSBMSG00010014493)	LPCAT1 (ENSBMSG00010014400)	SLC6A3 (ENSBMSG00010014310)	CLPTM1L (ENSBMSG00010014019)	TERT (ENSBMSG00010013889)	ENSBMSG00010013849	SLC6A19 (ENSBMSG00010013817)	SLC12A7 (ENSBMSG00010012799)	NKD2 (ENSBMSG00010012760)	TRIP13 (ENSBMSG00010012739)	BRD9 (ENSBMSG00010012713) ##22	ENSBMSG00010012701	TPPP (ENSBMSG00010012688)	CEP72 (ENSBMSG00010012670)	SLC9A3 (ENSBMSG00010012631)	EXOC3 (ENSBMSG00010012608)	ENSBMSG00010012584	ENSBMSG00010012570	PDCD6 (ENSBMSG00010012547)	SDHA (ENSBMSG00010012365)	ENSBMSG00010012313	LRRC14B (ENSBMSG00010012302)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183170.b.a ##22
Common shrew	MODERN SPECIES	1423																ENSSARG00000000408 ##22
Atlantogenata	ANCESTRAL SPECIES	157															ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Afrotheria	ANCESTRAL SPECIES	195															ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT01050000247757	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Afrotheria_a	ANCESTRAL SPECIES	195															ENSGT00390000017432	ENSGT00950000183170.b.a ##22	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT01050000247757	ENSGT00940000160982	ENSGT00910000144277	ENSGT00390000008818	ENSGT01030000234531.C	ENSGT00940000162507.A
Elephant	MODERN SPECIES	143															TRIP13 (ENSLAFG00000027677)	BRD9 (ENSLAFG00000002582) ##22	TPPP (ENSLAFG00000012849)	CEP72 (ENSLAFG00000017811)	SLC9A3 (ENSLAFG00000026212)	ENSLAFG00000005216	ENSLAFG00000026980	PDCD6 (ENSLAFG00000028295)	SDHA (ENSLAFG00000018337)	CCDC127 (ENSLAFG00000018335)	LRRC14B (ENSLAFG00000018331)	ENSLAFG00000029765	ENSLAFG00000007426
Tenrec	MODERN SPECIES	1590																BRD9 (ENSETEG00000009852) ##22
Xenarthra	ANCESTRAL SPECIES	1601															ENSGT00390000017432	ENSGT00950000183170.b.a ##22
Sloth	MODERN SPECIES	1734																ENSCHOG00000013826 ##22
Armadillo	MODERN SPECIES	1359														ENSDNOG00000035008	TRIP13 (ENSDNOG00000015202)	BRD9 (ENSDNOG00000017701) ##22