Tetrapoda	ANCESTRAL SPECIES	6					ENSGT00940000167200	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01030000235951	ENSGT00940000155311.B	ENSGT00940000154486.b.b	ENSGT00940000154486.b.a.a.b	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000178952
Amniota	ANCESTRAL SPECIES	6				ENSGT00940000167200	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00950000183546	ENSGT00940000163601	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01030000235951	ENSGT00940000155311.B	ENSGT00940000154486.b.b	ENSGT00940000154486.b.a.a.b	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000178952
Mammalia	ANCESTRAL SPECIES	7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27	ENSGT00940000161997.a #26	ENSGT00940000154486.b.b	ENSGT00940000154486.b.a.a.b	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000157267	ENSGT00940000159677.d
Theria	ANCESTRAL SPECIES	58	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Eutheria	ANCESTRAL SPECIES	5	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Glires	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Rodentia	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989.h #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005022452 #7	ENSSVLG00005022355 #8	ITGB2 (ENSSVLG00005022020) #9	SLX9 (ENSSVLG00005021933) #10	ADARB1 (ENSSVLG00005021761) #11	POFUT2 (ENSSVLG00005021705) #12	SLC19A1 (ENSSVLG00005020132) #13	PCBP3 (ENSSVLG00005019852) #14	COL6A1 (ENSSVLG00005019712) #15	COL6A2 (ENSSVLG00005019580) #16	ENSSVLG00005019331 #17	ENSSVLG00005019107 #18	SPATC1L (ENSSVLG00005019009) #19	LSS (ENSSVLG00005018385) #20	MCM3AP (ENSSVLG00005018327) #21	YBEY (ENSSVLG00005018192) #22	ENSSVLG00005018102 #23	ENSSVLG00005018080 #24	DIP2A (ENSSVLG00005015407) #25	S100B (ENSSVLG00005014991) #26	PRMT2 (ENSSVLG00005014458) #27
Marmotini	ANCESTRAL SPECIES	13	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989.h #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27
Marmotini_b	ANCESTRAL SPECIES	182	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989.h #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27
Squirrel	MODERN SPECIES	378	ENSSTOG00000010587 #7	PTTG1IP (ENSSTOG00000021779) #8	ITGB2 (ENSSTOG00000001412) #9	SLX9 (ENSSTOG00000028031) #10	ADARB1 (ENSSTOG00000015792) #11	POFUT2 (ENSSTOG00000028617) #12	ENSSTOG00000027467	SLC19A1 (ENSSTOG00000007113) #13	PCBP3 (ENSSTOG00000007178) #14	ENSSTOG00000022346	COL6A2 (ENSSTOG00000024366) #16	FTCD (ENSSTOG00000020132) #17	SPATC1L (ENSSTOG00000026388) #19	LSS (ENSSTOG00000007503) #20	MCM3AP (ENSSTOG00000007531) #21	YBEY (ENSSTOG00000029373) #22	ENSSTOG00000031143 #23	PCNT (ENSSTOG00000007621)	DIP2A (ENSSTOG00000007172) #25	PRMT2 (ENSSTOG00000016495) #27
Arctic ground squirrel	MODERN SPECIES	704											COL6A2 (ENSUPAG00010007568) #16	FTCD (ENSUPAG00010007605) #17	SPATC1L (ENSUPAG00010007627) #19	LSS (ENSUPAG00010007641) #20	MCM3AP (ENSUPAG00010007682) #21	YBEY (ENSUPAG00010007732) #22	PCNT (ENSUPAG00010007767)	DIP2A (ENSUPAG00010007831) #25	PRMT2 (ENSUPAG00010008124) #27	ENSUPAG00010008141
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000041314	MIXL1 (ENSHGLG00000045669)	LIN9 (ENSHGLG00000007823)	Parp1 (ENSHGLG00000003992)	ENSHGLG00000035038	PLAG1 (ENSHGLG00000001672)	MOS (ENSHGLG00000049453)	ENSHGLG00000033196	LYN (ENSHGLG00000002926)	ENSHGLG00000000284	ENSHGLG00000000295	ENSHGLG00000000769	TBPL2 (ENSHGLG00000001017)	ENSHGLG00000001414	ENSHGLG00000049393	ENSHGLG00000016069 #22	ENSHGLG00000017345 #23	PCNT (ENSHGLG00000015807)	DIP2A (ENSHGLG00000014043) #25	ENSHGLG00000013120 #26	ENSHGLG00000015854 #27	ENSHGLG00000032905	ENSHGLG00000047983	ENSHGLG00000051009	ENSHGLG00000042568	ENSHGLG00000012384	ENSHGLG00000050008	RPP38 (ENSHGLG00000012144)	ENSHGLG00000011997	ENSHGLG00000038242	ENSHGLG00000039803
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Guinea pig	MODERN SPECIES	110						POFUT2 (ENSCPOG00000009385) #12	COL18A1 (ENSCPOG00000020725)	SLC19A1 (ENSCPOG00000023229) #13	PCBP3 (ENSCPOG00000003648) #14	ENSCPOG00000030777	COL6A2 (ENSCPOG00000021819) #16	FTCD (ENSCPOG00000026874) #17	SPATC1L (ENSCPOG00000008358) #19	LSS (ENSCPOG00000013859) #20	MCM3AP (ENSCPOG00000002407) #21	YBEY (ENSCPOG00000002415) #22	ENSCPOG00000010788 #23	PCNT (ENSCPOG00000015488)	DIP2A (ENSCPOG00000003803) #25	S100B (ENSCPOG00000037925) #26	PRMT2 (ENSCPOG00000019877) #27	ENSCPOG00000024671
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00950000182895.a.a.a.b.f ##7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Long-tailed chinchilla	MODERN SPECIES	114	ENSCLAG00000006914 ##7	PTTG1IP (ENSCLAG00000008686) #8	ITGB2 (ENSCLAG00000011530) #9	SLX9 (ENSCLAG00000015540) #10	ADARB1 (ENSCLAG00000010595) #11	POFUT2 (ENSCLAG00000014869) #12	COL18A1 (ENSCLAG00000009590)	SLC19A1 (ENSCLAG00000005746) #13	PCBP3 (ENSCLAG00000006667) #14	COL6A1 (ENSCLAG00000004686) #15	COL6A2 (ENSCLAG00000009215) #16	FTCD (ENSCLAG00000014029) #17	SPATC1L (ENSCLAG00000016436) #19	LSS (ENSCLAG00000011987) #20	MCM3AP (ENSCLAG00000013358) #21	YBEY (ENSCLAG00000006892) #22	ENSCLAG00000007820 #23	PCNT (ENSCLAG00000012697)	DIP2A (ENSCLAG00000013614) #25	S100B (ENSCLAG00000009038) #26	PRMT2 (ENSCLAG00000006778) #27
Degu	MODERN SPECIES	86	ENSODEG00000013838 ##7	PTTG1IP (ENSODEG00000013537) #8	ITGB2 (ENSODEG00000013569) #9	ADARB1 (ENSODEG00000014508) #11	POFUT2 (ENSODEG00000013451) #12	ENSODEG00000020203	ENSODEG00000013398	PCBP3 (ENSODEG00000012873) #14	ENSODEG00000013981	ENSODEG00000020105	COL6A2 (ENSODEG00000013531) #16	FTCD (ENSODEG00000013308) #17	SPATC1L (ENSODEG00000013418) #19	LSS (ENSODEG00000014728) #20	MCM3AP (ENSODEG00000013662) #21	YBEY (ENSODEG00000014950) #22	DIP2A (ENSODEG00000013484) #25	PRMT2 (ENSODEG00000013920) #27	IGFBPL1 (ENSODEG00000013895)	ALDH1B1 (ENSODEG00000014240)	SHB (ENSODEG00000013286)	ENSODEG00000020274	DCAF10 (ENSODEG00000015520)	ENSODEG00000014904	FRMPD1 (ENSODEG00000016482)	FBXO10 (ENSODEG00000013432)	POLR1E (ENSODEG00000014565)	ZBTB5 (ENSODEG00000013905)	ENSODEG00000014628	PAX5 (ENSODEG00000014314)	MELK (ENSODEG00000015169)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Kangaroo rat	MODERN SPECIES	478	Sumo3 (ENSDORG00000025904) #7	Pttg1ip (ENSDORG00000028984) #8	ENSDORG00000012531 #9	Fam207a (ENSDORG00000028131) #10	Adarb1 (ENSDORG00000000619) #11	Pofut2 (ENSDORG00000009350) #12	ENSDORG00000011477	Slc19a1 (ENSDORG00000008087) #13	Pcbp3 (ENSDORG00000003640) #14	ENSDORG00000004103	Col6a2 (ENSDORG00000028732) #16	Ftcd (ENSDORG00000004547) #17	Spatc1l (ENSDORG00000010414) #19	Lss (ENSDORG00000010415) #20	Mcm3ap (ENSDORG00000004416) #21	Ybey (ENSDORG00000024242) #22	ENSDORG00000007242 #23	Pcnt (ENSDORG00000007244)	ENSDORG00000027954	Dip2a (ENSDORG00000012447) #25	S100b (ENSDORG00000013831) #26
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Muroidea	ANCESTRAL SPECIES	11	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b	ENSGT00940000155608	ENSGT00940000162786
Golden Hamster	MODERN SPECIES	641	ENSMAUG00000021821 #9	Fam207a (ENSMAUG00000009365) #10	Adarb1 (ENSMAUG00000009334) #11	Pofut2 (ENSMAUG00000006922) #12	Col18a1 (ENSMAUG00000008076)	Slc19a1 (ENSMAUG00000007979) #13	ENSMAUG00000012520	Pcbp3 (ENSMAUG00000007036) #14	ENSMAUG00000020615	Col6a2 (ENSMAUG00000022073) #16	Ftcd (ENSMAUG00000004152) #17	Spatc1l (ENSMAUG00000006869) #19	Lss (ENSMAUG00000005365) #20	Mcm3ap (ENSMAUG00000008393) #21	ENSMAUG00000002217	Ybey (ENSMAUG00000005858) #22	2610028H24Rik (ENSMAUG00000009720) #23	Pcnt (ENSMAUG00000022248)	Dip2a (ENSMAUG00000018650) #25	S100b (ENSMAUG00000015774) #26	Prmt2 (ENSMAUG00000017688) #27	Slc5a4a (ENSMAUG00000019866)	Zfp280b (ENSMAUG00000015647)	ENSMAUG00000011759	Vpreb3 (ENSMAUG00000010815)	Chchd10 (ENSMAUG00000012109)	Mmp11 (ENSMAUG00000012311)	Smarcb1 (ENSMAUG00000021023)	Derl3 (ENSMAUG00000016207)	ENSMAUG00000002603	Gstt4 (ENSMAUG00000010826)
Chinese hamster chok1gshd	MODERN SPECIES	204	Sumo3 (ENSCGRG00001014923) #7	Pttg1ip (ENSCGRG00001000333) #8	Itgb2 (ENSCGRG00001016235) #9	Fam207a (ENSCGRG00001016236) #10	Adarb1 (ENSCGRG00001023922) #11	Pofut2 (ENSCGRG00001022765) #12	Col18a1 (ENSCGRG00001013369)	SLC19A1 (ENSCGRG00001016846) #13	Pcbp3 (ENSCGRG00001006836) #14	Col6a1 (ENSCGRG00001017421) #15	Col6a2 (ENSCGRG00001003342) #16	Ftcd (ENSCGRG00001011730) #17	Spatc1l (ENSCGRG00001017850) #19	Lss (ENSCGRG00001020282) #20	Mcm3ap (ENSCGRG00001015274) #21	Ybey (ENSCGRG00001022036) #22	2610028H24Rik (ENSCGRG00001023849) #23	Pcnt (ENSCGRG00001017614)	Dip2a (ENSCGRG00001004170) #25	ENSCGRG00001009479	Prmt2 (ENSCGRG00001010555) #27	ENSCGRG00001002616	ENSCGRG00001024447	Zfp280b (ENSCGRG00001011844)	ENSCGRG00001000305	Vpreb3 (ENSCGRG00001007138)	Chchd10 (ENSCGRG00001023480)	Mmp11 (ENSCGRG00001001274)	Smarcb1 (ENSCGRG00001013732)	Derl3 (ENSCGRG00001023562)	Mif (ENSCGRG00001002079)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b
Northern American deer mouse	MODERN SPECIES	13	ENSPEMG00000029963 ##7	Pttg1ip (ENSPEMG00000022833) #8	Itgb2 (ENSPEMG00000023793) #9	Fam207a (ENSPEMG00000029013) #10	Adarb1 (ENSPEMG00000022360) #11	Pofut2 (ENSPEMG00000021691) #12	Col18a1 (ENSPEMG00000019720)	Slc19a1 (ENSPEMG00000019847) #13	Pcbp3 (ENSPEMG00000000587) #14	Col6a1 (ENSPEMG00000011883) #15	Col6a2 (ENSPEMG00000023614) #16	Ftcd (ENSPEMG00000011905) #17	Spatc1l (ENSPEMG00000015524) #19	Lss (ENSPEMG00000024002) #20	Mcm3ap (ENSPEMG00000014754) #21	Ybey (ENSPEMG00000000492) #22	2610028H24Rik (ENSPEMG00000009493) #23	Pcnt (ENSPEMG00000012406)	Dip2a (ENSPEMG00000011906) #25	S100b (ENSPEMG00000024584) #26	Prmt2 (ENSPEMG00000016675) #27	Slc5a4a (ENSPEMG00000016494)	Slc5a4b (ENSPEMG00000018545)	Zfp280b (ENSPEMG00000023991)	Gm5134 (ENSPEMG00000017870)	Vpreb3 (ENSPEMG00000010214)	Gm867 (ENSPEMG00000025778)	Chchd10 (ENSPEMG00000000593)	Mmp11 (ENSPEMG00000011798)	Smarcb1 (ENSPEMG00000009146)	Derl3 (ENSPEMG00000001396)
Prairie vole	MODERN SPECIES	352	ENSMOCG00000021821 #7	Pttg1ip (ENSMOCG00000020270) #8	Itgb2 (ENSMOCG00000022498) #9	Fam207a (ENSMOCG00000021449) #10	Adarb1 (ENSMOCG00000018324) #11	Pofut2 (ENSMOCG00000013158) #12	Col18a1 (ENSMOCG00000019606)	Slc19a1 (ENSMOCG00000008838) #13	Pcbp3 (ENSMOCG00000016127) #14	Col6a1 (ENSMOCG00000015635) #15	Col6a2 (ENSMOCG00000007120) #16	Ftcd (ENSMOCG00000013801) #17	Spatc1l (ENSMOCG00000012025) #19	Lss (ENSMOCG00000020263) #20	Mcm3ap (ENSMOCG00000018380) #21	Ybey (ENSMOCG00000012634) #22	2610028H24Rik (ENSMOCG00000022971) #23	Pcnt (ENSMOCG00000006875)	Dip2a (ENSMOCG00000015916) #25	S100b (ENSMOCG00000020304) #26	Prmt2 (ENSMOCG00000017602) #27	Slc5a4a (ENSMOCG00000003852)	Slc5a4b (ENSMOCG00000019990)	Zfp280b (ENSMOCG00000012097)	Gm5134 (ENSMOCG00000021314)	Vpreb3 (ENSMOCG00000008215)	Chchd10 (ENSMOCG00000010864)	Mmp11 (ENSMOCG00000020671)	Smarcb1 (ENSMOCG00000019899)	Derl3 (ENSMOCG00000017853)	Mif (ENSMOCG00000016316)
Murinae	ANCESTRAL SPECIES	18	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mus	ANCESTRAL SPECIES	15	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00900000143399	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00900000143399	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00390000015147	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585
Mouse	MODERN SPECIES	1	Sumo3 (ENSMUSG00000020265) #7	Pttg1ip (ENSMUSG00000009291) #8	Itgb2 (ENSMUSG00000000290) #9	Fam207a (ENSMUSG00000032977) #10	Adarb1 (ENSMUSG00000020262) #11	Pofut2 (ENSMUSG00000020260) #12	Col18a1 (ENSMUSG00000001435)	Slc19a1 (ENSMUSG00000001436) #13	Pcbp3 (ENSMUSG00000001120) #14	Col6a1 (ENSMUSG00000001119) #15	Col6a2 (ENSMUSG00000020241) #16	Ftcd (ENSMUSG00000001155) #17	Spatc1l (ENSMUSG00000009115) #19	Lss (ENSMUSG00000033105) #20	Mcm3ap (ENSMUSG00000001150) #21	Ybey (ENSMUSG00000033126) #22	2610028H24Rik (ENSMUSG00000009114) #23	Gm56118 (ENSMUSG00000117965) #24	Pcnt (ENSMUSG00000001151)	Dip2a (ENSMUSG00000020231) #25	S100b (ENSMUSG00000033208) #26	Prmt2 (ENSMUSG00000020230) #27	Slc5a4a (ENSMUSG00000020229)	Slc5a4b (ENSMUSG00000020226)	Zfp280b (ENSMUSG00000049764)	Gm5134 (ENSMUSG00000033255)	Vpreb3 (ENSMUSG00000000903)	Gm867 (ENSMUSG00000050157)	Chchd10 (ENSMUSG00000049422)	Mmp11 (ENSMUSG00000000901)	Smarcb1 (ENSMUSG00000000902)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.c #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00900000143399	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000160846.c	ENSGT00940000160846.d	ENSGT00940000161054	ENSGT00940000163531	ENSGT00940000161808	ENSGT00940000161345	ENSGT00940000156340.a	ENSGT00440000038585	ENSGT00530000063156.a.a.b	ENSGT00940000155608.q.a.a.a.a
Steppe mouse	MODERN SPECIES	2997													ENSMSIG00000003212 #19	Lss (ENSMSIG00000003250) #20	Mcm3ap (ENSMSIG00000003384) #21	ENSMSIG00000003478 #22	2610028H24Rik (ENSMSIG00000003499) #23	Pcnt (ENSMSIG00000003573)	Dip2a (ENSMSIG00000004099) #25	S100b (ENSMSIG00000004765) #26	Prmt2 (ENSMSIG00000004778) #27	Slc5a4a (ENSMSIG00000004850)	Slc5a4b (ENSMSIG00000004902)	ENSMSIG00000004952	Gm5134 (ENSMSIG00000004960)	Vpreb3 (ENSMSIG00000005055)	Mmp11 (ENSMSIG00000005065)	Smarcb1 (ENSMSIG00000005155)	Derl3 (ENSMSIG00000005221)	ENSMSIG00000005270	Gstt2 (ENSMSIG00000005282)
spretus	MODERN SPECIES	1	Itgb2 (MGP_SPRETEiJ_G0016296) #9	Fam207a (MGP_SPRETEiJ_G0016295) #10	Adarb1 (MGP_SPRETEiJ_G0016294) #11	Pofut2 (MGP_SPRETEiJ_G0016293) #12	MGP_SPRETEiJ_G0016292	Col18a1 (MGP_SPRETEiJ_G0016291)	Slc19a1 (MGP_SPRETEiJ_G0016290) #13	MGP_SPRETEiJ_G0016289	Pcbp3 (MGP_SPRETEiJ_G0016288) #14	Col6a1 (MGP_SPRETEiJ_G0016287) #15	Col6a2 (MGP_SPRETEiJ_G0016286) #16	Ftcd (MGP_SPRETEiJ_G0016285) #17	Spatc1l (MGP_SPRETEiJ_G0016284) #19	Lss (MGP_SPRETEiJ_G0016283) #20	Mcm3ap (MGP_SPRETEiJ_G0016282) #21	Ybey (MGP_SPRETEiJ_G0016281) #22	2610028H24Rik (MGP_SPRETEiJ_G0016280) #23	Pcnt (MGP_SPRETEiJ_G0016279)	MGP_SPRETEiJ_G0016278 #25	S100b (MGP_SPRETEiJ_G0016277) #26	Prmt2 (MGP_SPRETEiJ_G0016276) #27	Slc5a4a (MGP_SPRETEiJ_G0016275)	Slc5a4b (MGP_SPRETEiJ_G0016274)	Zfp280b (MGP_SPRETEiJ_G0016273)	Gm5134 (MGP_SPRETEiJ_G0016272)	Vpreb3 (MGP_SPRETEiJ_G0016271)	Chchd10 (MGP_SPRETEiJ_G0016270)	Mmp11 (MGP_SPRETEiJ_G0016269)	Smarcb1 (MGP_SPRETEiJ_G0016268)	Derl3 (MGP_SPRETEiJ_G0016267)	Mif (MGP_SPRETEiJ_G0016266)
Ryukyu mouse	MODERN SPECIES	1	Itgb2 (MGP_CAROLIEiJ_G0015483) #9	Fam207a (MGP_CAROLIEiJ_G0015482) #10	Adarb1 (MGP_CAROLIEiJ_G0015481) #11	Pofut2 (MGP_CAROLIEiJ_G0015480) #12	MGP_CAROLIEiJ_G0015479	Col18a1 (MGP_CAROLIEiJ_G0015478)	Slc19a1 (MGP_CAROLIEiJ_G0015477) #13	MGP_CAROLIEiJ_G0015476	Pcbp3 (MGP_CAROLIEiJ_G0015475) #14	Col6a1 (MGP_CAROLIEiJ_G0015474) #15	Col6a2 (MGP_CAROLIEiJ_G0015473) #16	Ftcd (MGP_CAROLIEiJ_G0015472) #17	Spatc1l (MGP_CAROLIEiJ_G0015471) #19	Lss (MGP_CAROLIEiJ_G0015470) #20	Mcm3ap (MGP_CAROLIEiJ_G0015469) #21	Ybey (MGP_CAROLIEiJ_G0015468) #22	2610028H24Rik (MGP_CAROLIEiJ_G0015467) #23	Pcnt (MGP_CAROLIEiJ_G0015466)	Dip2a (MGP_CAROLIEiJ_G0015465) #25	S100b (MGP_CAROLIEiJ_G0015464) #26	Prmt2 (MGP_CAROLIEiJ_G0015463) #27	Slc5a4a (MGP_CAROLIEiJ_G0015462)	Slc5a4b (MGP_CAROLIEiJ_G0015461)	Zfp280b (MGP_CAROLIEiJ_G0015460)	Gm5134 (MGP_CAROLIEiJ_G0015459)	Vpreb3 (MGP_CAROLIEiJ_G0015458)	Chchd10 (MGP_CAROLIEiJ_G0015457)	Mmp11 (MGP_CAROLIEiJ_G0015456)	Smarcb1 (MGP_CAROLIEiJ_G0015455)	Derl3 (MGP_CAROLIEiJ_G0015454)	Mif (MGP_CAROLIEiJ_G0015453)
Shrew mouse	MODERN SPECIES	22	Pttg1ip (MGP_PahariEiJ_G0030897) #8	Itgb2 (MGP_PahariEiJ_G0030896) #9	Fam207a (MGP_PahariEiJ_G0030895) #10	Adarb1 (MGP_PahariEiJ_G0030894) #11	Pofut2 (MGP_PahariEiJ_G0030893) #12	Col18a1 (MGP_PahariEiJ_G0030892)	Slc19a1 (MGP_PahariEiJ_G0030891) #13	MGP_PahariEiJ_G0030890	Pcbp3 (MGP_PahariEiJ_G0030889) #14	Col6a1 (MGP_PahariEiJ_G0030888) #15	Col6a2 (MGP_PahariEiJ_G0030887) #16	Ftcd (MGP_PahariEiJ_G0030886) #17	Spatc1l (MGP_PahariEiJ_G0030885) #19	Lss (MGP_PahariEiJ_G0030884) #20	Mcm3ap (MGP_PahariEiJ_G0030883) #21	Ybey (MGP_PahariEiJ_G0030882) #22	2610028H24Rik (MGP_PahariEiJ_G0030881) #23	Pcnt (MGP_PahariEiJ_G0030880)	Dip2a (MGP_PahariEiJ_G0030879) #25	S100b (MGP_PahariEiJ_G0030878) #26	Prmt2 (MGP_PahariEiJ_G0030877) #27	Slc5a4a (MGP_PahariEiJ_G0030876)	Gm5134 (MGP_PahariEiJ_G0030875)	MGP_PahariEiJ_G0030874	Chchd10 (MGP_PahariEiJ_G0030873)	Mmp11 (MGP_PahariEiJ_G0030872)	Smarcb1 (MGP_PahariEiJ_G0030871)	Derl3 (MGP_PahariEiJ_G0030870)	Mif (MGP_PahariEiJ_G0030869)	Gstt2 (MGP_PahariEiJ_G0030868)	Gstt4 (MGP_PahariEiJ_G0030867)
Rat	MODERN SPECIES	12	Pttg1ip (ENSRNOG00000001223) #8	Itgb2 (ENSRNOG00000001224) #9	Slx9 (ENSRNOG00000001225) #10	Nme2-ps1 (ENSRNOG00000001226)	Adarb1 (ENSRNOG00000001227) #11	Pofut2 (ENSRNOG00000001228) #12	Col18a1 (ENSRNOG00000001229)	Slc19a1 (ENSRNOG00000001232) #13	Pcbp3 (ENSRNOG00000001245) #14	Col6a1 (ENSRNOG00000001249) #15	Col6a2 (ENSRNOG00000001254) #16	Ftcd (ENSRNOG00000001261) #17	Spatc1l (ENSRNOG00000070409) #19	Lss (ENSRNOG00000054549) #20	Mcm3ap (ENSRNOG00000001272) #21	Ybey (ENSRNOG00000021365) #22	RGD1564149 (ENSRNOG00000012714) #23	Pcnt (ENSRNOG00000001276)	Dip2a (ENSRNOG00000043212) #25	S100b (ENSRNOG00000001295) #26	Prmt2 (ENSRNOG00000001297) #27	Slc5a4 (ENSRNOG00000049734)	Slc5a4b (ENSRNOG00000001298)	Zfp280b (ENSRNOG00000028441)	RGD1563815 (ENSRNOG00000029979)	Vpreb3 (ENSRNOG00000065441)	RGD1564162 (ENSRNOG00000028386)	Chchd10 (ENSRNOG00000028356)	Mmp11 (ENSRNOG00000028344)	Smarcb1 (ENSRNOG00000028302)	Derl3 (ENSRNOG00000028243)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1105	Sumo3 (ENSNGAG00000009915) #7	Pttg1ip (ENSNGAG00000014261) #8	Itgb2 (ENSNGAG00000015702) #9	Fam207a (ENSNGAG00000020787) #10	Adarb1 (ENSNGAG00000021602) #11	Pofut2 (ENSNGAG00000016043) #12	Col18a1 (ENSNGAG00000019514)	ENSNGAG00000003477 #13	Pcbp3 (ENSNGAG00000005416) #14	Col6a1 (ENSNGAG00000010525) #15	Col6a2 (ENSNGAG00000013702) #16	Ftcd (ENSNGAG00000015978) #17	Spatc1l (ENSNGAG00000016890) #19	Lss (ENSNGAG00000018100) #20	Mcm3ap (ENSNGAG00000020806) #21	Ybey (ENSNGAG00000000949) #22	ENSNGAG00000001257 #23	Pcnt (ENSNGAG00000006451)	Dip2a (ENSNGAG00000014719) #25	S100b (ENSNGAG00000017093) #26	ENSNGAG00000017453 #27
Lagomorpha	ANCESTRAL SPECIES	266														ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Rabbit	MODERN SPECIES	5												ENSOCUG00000000409 #16	ENSOCUG00000026058	LSS (ENSOCUG00000001938) #20	MCM3AP (ENSOCUG00000004784) #21	YBEY (ENSOCUG00000027700) #22	ENSOCUG00000004797 #23	PCNT (ENSOCUG00000004806)	DIP2A (ENSOCUG00000004831) #25	S100B (ENSOCUG00000001473) #26	PRMT2 (ENSOCUG00000016126) #27	ENSOCUG00000028055	ENSOCUG00000017611	GTPBP6 (ENSOCUG00000008245)	PLCXD1 (ENSOCUG00000025223)	OLIG1 (ENSOCUG00000027389)	C21orf62 (ENSOCUG00000007160)	SYNJ1 (ENSOCUG00000001420)	CFAP298 (ENSOCUG00000000461)	ENSOCUG00000012278	URB1 (ENSOCUG00000009381)
Pika	MODERN SPECIES	2600															MCM3AP (ENSOPRG00000014690) #21	ENSOPRG00000014733 #22	ENSOPRG00000014740 #23
Tree shrew	MODERN SPECIES	2055										COL6A2 (ENSTBEG00000015302) #16	FTCD (ENSTBEG00000015952) #17	SPATC1L (ENSTBEG00000016200) #19	LSS (ENSTBEG00000016213) #20	MCM3AP (ENSTBEG00000016484) #21	ENSTBEG00000016787	YBEY (ENSTBEG00000016856) #22	ENSTBEG00000016931 #23
Primates	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00950000182895.a.b.j.b #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00950000182895.a.b.j.b #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00950000182895.a.b.j.b #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Vervet Monkey	MODERN SPECIES	11	ENSCSAG00000000274	ENSCSAG00000007491	ADARB1 (ENSCSAG00000007489) #11	POFUT2 (ENSCSAG00000007479) #12	ENSCSAG00000007471	SLC19A1 (ENSCSAG00000007456) #13	ENSCSAG00000007440	ENSCSAG00000007430	ENSCSAG00000007424	ENSCSAG00000007389	COL6A2 (ENSCSAG00000007240) #16	FTCD (ENSCSAG00000007233) #17	SPATC1L (ENSCSAG00000007226) #19	LSS (ENSCSAG00000007209) #20	MCM3AP (ENSCSAG00000007194) #21	YBEY (ENSCSAG00000007183) #22	C21orf58 (ENSCSAG00000007179) #23	PCNT (ENSCSAG00000007152)	DIP2A (ENSCSAG00000007091) #25	S100B (ENSCSAG00000007071) #26	PRMT2 (ENSCSAG00000007062) #27
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00950000182895.a.b.j.b.f #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00950000182895.a.b.j.b.f #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00950000182895.a.b.j.b.f #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Rhesus	MODERN SPECIES	13	SLX9 (ENSMMUG00000000953) #10	ENSMMUG00000061023	ADARB1 (ENSMMUG00000010695) #11	POFUT2 (ENSMMUG00000010700) #12	COL18A1 (ENSMMUG00000004472)	SLC19A1 (ENSMMUG00000004477) #13	PCBP3 (ENSMMUG00000003825) #14	COL6A1 (ENSMMUG00000000544) #15	ENSMMUG00000055486	COL6A2 (ENSMMUG00000022317) #16	FTCD (ENSMMUG00000022324) #17	SPATC1L (ENSMMUG00000058335) #19	ENSMMUG00000064313	LSS (ENSMMUG00000022329) #20	MCM3AP (ENSMMUG00000022331) #21	YBEY (ENSMMUG00000012911) #22	C3H21orf58 (ENSMMUG00000039473) #23	PCNT (ENSMMUG00000012914)	DIP2A (ENSMMUG00000015797) #25	S100B (ENSMMUG00000063077) #26	PRMT2 (ENSMMUG00000015803) #27	ENSMMUG00000053532
Crab-eating macaque	MODERN SPECIES	13	PTTG1IP (ENSMFAG00000033191) #8	ITGB2 (ENSMFAG00000036141) #9	SLX9 (ENSMFAG00000037615) #10	ADARB1 (ENSMFAG00000011312) #11	ENSMFAG00000003616 #12	SLC19A1 (ENSMFAG00000041513) #13	ENSMFAG00000056786	ENSMFAG00000053223	PCBP3 (ENSMFAG00000034574) #14	ENSMFAG00000003504	ENSMFAG00000060948	FTCD (ENSMFAG00000039806) #17	SPATC1L (ENSMFAG00000031624) #19	LSS (ENSMFAG00000034060) #20	MCM3AP (ENSMFAG00000041104) #21	ENSMFAG00000014564 #22	C21orf58 (ENSMFAG00000041495) #23	ENSMFAG00000059298	ENSMFAG00000047423	DIP2A (ENSMFAG00000034305) #25	ENSMFAG00000053934	ENSMFAG00000033124	PRMT2 (ENSMFAG00000003831) #27	ENSMFAG00000056988
Pig-tailed macaque	MODERN SPECIES	503	ENSMNEG00000045199 ##7	PTTG1IP (ENSMNEG00000030046) #8	ITGB2 (ENSMNEG00000031016) #9	SLX9 (ENSMNEG00000044629) #10	ADARB1 (ENSMNEG00000031543) #11	POFUT2 (ENSMNEG00000041753) #12	COL18A1 (ENSMNEG00000032048)	SLC19A1 (ENSMNEG00000029970) #13	PCBP3 (ENSMNEG00000035551) #14	COL6A1 (ENSMNEG00000043587) #15	COL6A2 (ENSMNEG00000035628) #16	FTCD (ENSMNEG00000045053) #17	SPATC1L (ENSMNEG00000028822) #19	LSS (ENSMNEG00000044250) #20	MCM3AP (ENSMNEG00000029780) #21	YBEY (ENSMNEG00000039114) #22	C21orf58 (ENSMNEG00000029851) #23	PCNT (ENSMNEG00000036330)	DIP2A (ENSMNEG00000040653) #25	ENSMNEG00000034764	PRMT2 (ENSMNEG00000038764) #27
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00950000182895.a.b.j.a.a #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Olive baboon	MODERN SPECIES	14	ENSPANG00000031359 ##7	PTTG1IP (ENSPANG00000005642) #8	ITGB2 (ENSPANG00000023629) #9	SLX9 (ENSPANG00000021083) #10	ADARB1 (ENSPANG00000020871) #11	POFUT2 (ENSPANG00000023630) #12	SLC19A1 (ENSPANG00000017097) #13	PCBP3 (ENSPANG00000023631) #14	ENSPANG00000022692	ENSPANG00000048117	COL6A2 (ENSPANG00000024175) #16	FTCD (ENSPANG00000008270) #17	SPATC1L (ENSPANG00000017098) #19	LSS (ENSPANG00000019152) #20	MCM3AP (ENSPANG00000024225) #21	YBEY (ENSPANG00000024224) #22	C21orf58 (ENSPANG00000024223) #23	ENSPANG00000049667 #24	PCNT (ENSPANG00000008159)	DIP2A (ENSPANG00000022431) #25	S100B (ENSPANG00000042633) #26	PRMT2 (ENSPANG00000019949) #27	ENSPANG00000045615	ENSPANG00000047026
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00950000182895.a.b.j.a.a #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00530000064552	ENSGT00940000160683 #27
Drill	MODERN SPECIES	1221									PCBP3 (ENSMLEG00000038785) #14	COL6A1 (ENSMLEG00000029822) #15	COL6A2 (ENSMLEG00000017555) #16	FTCD (ENSMLEG00000008656) #17	SPATC1L (ENSMLEG00000028783) #19	LSS (ENSMLEG00000033329) #20	MCM3AP (ENSMLEG00000041901) #21	YBEY (ENSMLEG00000034149) #22	ENSMLEG00000033463	PCNT (ENSMLEG00000036135)	DIP2A (ENSMLEG00000040859) #25	ENSMLEG00000030850	PRMT2 (ENSMLEG00000041912) #27	ENSMLEG00000043464	ENSMLEG00000032551
Sooty mangabey	MODERN SPECIES	465	ENSCATG00000041498 ##7	PTTG1IP (ENSCATG00000033867) #8	ITGB2 (ENSCATG00000039608) #9	SLX9 (ENSCATG00000019293) #10	ADARB1 (ENSCATG00000029876) #11	POFUT2 (ENSCATG00000034952) #12	COL18A1 (ENSCATG00000038222)	SLC19A1 (ENSCATG00000036905) #13	PCBP3 (ENSCATG00000038419) #14	COL6A1 (ENSCATG00000040431) #15	COL6A2 (ENSCATG00000041547) #16	FTCD (ENSCATG00000041690) #17	SPATC1L (ENSCATG00000037303) #19	LSS (ENSCATG00000038397) #20	MCM3AP (ENSCATG00000039155) #21	YBEY (ENSCATG00000035660) #22	C21orf58 (ENSCATG00000007258) #23	PCNT (ENSCATG00000040523)	DIP2A (ENSCATG00000025334) #25	ENSCATG00000037851	PRMT2 (ENSCATG00000031360) #27
Rhinopithecus	ANCESTRAL SPECIES	210	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162768.B	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00530000064552	ENSGT00940000160683 #27
Golden snub-nosed monkey	MODERN SPECIES	1482				SLX9 (ENSRROG00000045309) #10	ADARB1 (ENSRROG00000042856) #11	POFUT2 (ENSRROG00000036833) #12	COL18A1 (ENSRROG00000041309)	SLC19A1 (ENSRROG00000032854) #13	PCBP3 (ENSRROG00000034567) #14	COL6A1 (ENSRROG00000034310) #15	COL6A2 (ENSRROG00000038780) #16	FTCD (ENSRROG00000045071) #17	SPATC1L (ENSRROG00000030883) #19	LSS (ENSRROG00000040461) #20	MCM3AP (ENSRROG00000006150) #21	YBEY (ENSRROG00000039507) #22	C21orf58 (ENSRROG00000043985) #23	PCNT (ENSRROG00000034301)	DIP2A (ENSRROG00000034962) #25	ENSRROG00000029645	PRMT2 (ENSRROG00000041142) #27
Black snub-nosed monkey	MODERN SPECIES	1318												FTCD (ENSRBIG00000039978) #17	SPATC1L (ENSRBIG00000027898) #19	LSS (ENSRBIG00000031749) #20	MCM3AP (ENSRBIG00000031129) #21	YBEY (ENSRBIG00000032496) #22	C21orf58 (ENSRBIG00000044610) #23	PCNT (ENSRBIG00000035911)	DIP2A (ENSRBIG00000040181) #25	ENSRBIG00000029838	PRMT2 (ENSRBIG00000040835) #27
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000018577	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Hominidae	ANCESTRAL SPECIES	25	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000018577	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709.f #10	ENSGT00390000018577	ENSGT00390000015709.e.a #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Gorilla	MODERN SPECIES	12	PTTG1IP (ENSGGOG00000002077) #8	ITGB2 (ENSGGOG00000014457) #9	ENSGGOG00000014477	ENSGGOG00000014482 #10	ADARB1 (ENSGGOG00000013244) #11	POFUT2 (ENSGGOG00000015065) #12	ENSGGOG00000011704	SLC19A1 (ENSGGOG00000011734) #13	PCBP3 (ENSGGOG00000003683) #14	COL6A1 (ENSGGOG00000001462) #15	COL6A2 (ENSGGOG00000003661) #16	FTCD (ENSGGOG00000002869) #17	SPATC1L (ENSGGOG00000012943) #19	LSS (ENSGGOG00000015701) #20	MCM3AP (ENSGGOG00000015716) #21	YBEY (ENSGGOG00000015733) #22	C21orf58 (ENSGGOG00000041767) #23	PCNT (ENSGGOG00000011788)	DIP2A (ENSGGOG00000011841) #25	ENSGGOG00000027399	PRMT2 (ENSGGOG00000010719) #27
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709.f #10	ENSGT00390000018577	ENSGT00390000015709.e.a #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Human	MODERN SPECIES	13	SUMO3 (ENSG00000184900) #7	PTTG1IP (ENSG00000183255) #8	ITGB2 (ENSG00000160255) #9	SLX9 (ENSG00000160256) #10	ADARB1 (ENSG00000197381) #11	POFUT2 (ENSG00000186866) #12	COL18A1 (ENSG00000182871)	SLC19A1 (ENSG00000173638) #13	PCBP3 (ENSG00000183570) #14	COL6A1 (ENSG00000142156) #15	COL6A2 (ENSG00000142173) #16	FTCD (ENSG00000160282) #17	SPATC1L (ENSG00000160284) #19	LSS (ENSG00000160285) #20	MCM3AP (ENSG00000160294) #21	YBEY (ENSG00000182362) #22	C21orf58 (ENSG00000160298) #23	PCNT (ENSG00000160299)	ENSG00000286224 #24	DIP2A (ENSG00000160305) #25	S100B (ENSG00000160307) #26	PRMT2 (ENSG00000160310) #27
Pan	ANCESTRAL SPECIES	27	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000018577	ENSGT00390000015709.e.a.a #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00530000064552	ENSGT00940000160683 #27
Chimpanzee	MODERN SPECIES	12	PTTG1IP (ENSPTRG00000013992) #8	ITGB2 (ENSPTRG00000013993) #9	ENSPTRG00000013994	SLX9 (ENSPTRG00000013995) #10	ADARB1 (ENSPTRG00000013997) #11	POFUT2 (ENSPTRG00000014001) #12	COL18A1 (ENSPTRG00000014005)	SLC19A1 (ENSPTRG00000031409) #13	PCBP3 (ENSPTRG00000014010) #14	COL6A2 (ENSPTRG00000014014) #16	ENSPTRG00000049395 #16	ENSPTRG00000047921	SPATC1L (ENSPTRG00000014016) #19	LSS (ENSPTRG00000014017) #20	MCM3AP (ENSPTRG00000014019) #21	YBEY (ENSPTRG00000014021) #22	C21H21orf58 (ENSPTRG00000014022) #23	PCNT (ENSPTRG00000014023)	DIP2A (ENSPTRG00000014025) #25	S100B (ENSPTRG00000014026)	PRMT2 (ENSPTRG00000014027) #27
Bonobo	MODERN SPECIES	12	PTTG1IP (ENSPPAG00000032064) #8	ITGB2 (ENSPPAG00000033785) #9	ENSPPAG00000034706	ENSPPAG00000034875 #10	ADARB1 (ENSPPAG00000027139) #11	POFUT2 (ENSPPAG00000035189) #12	ENSPPAG00000014049	SLC19A1 (ENSPPAG00000027716) #13	PCBP3 (ENSPPAG00000021940) #14	COL6A1 (ENSPPAG00000027819) #15	COL6A2 (ENSPPAG00000029776) #16	FTCD (ENSPPAG00000032812) #17	SPATC1L (ENSPPAG00000034632) #19	LSS (ENSPPAG00000035048) #20	MCM3AP (ENSPPAG00000025048) #21	YBEY (ENSPPAG00000030933) #22	C21orf58 (ENSPPAG00000031586) #23	PCNT (ENSPPAG00000034343)	DIP2A (ENSPPAG00000038882) #25	ENSPPAG00000030816	PRMT2 (ENSPPAG00000035050) #27
Orangutan	MODERN SPECIES	12	PTTG1IP (ENSPPYG00000036754) #8	ITGB2 (ENSPPYG00000011506) #9	ENSPPYG00000031942	SLX9 (ENSPPYG00000011509) #10	ADARB1 (ENSPPYG00000011514) #11	POFUT2 (ENSPPYG00000011516) #12	ENSPPYG00000011521	SLC19A1 (ENSPPYG00000011523) #13	PCBP3 (ENSPPYG00000011525) #14	COL6A1 (ENSPPYG00000034634) #15	COL6A2 (ENSPPYG00000011527) #16	FTCD (ENSPPYG00000011528) #17	SPATC1L (ENSPPYG00000011529) #19	LSS (ENSPPYG00000011530) #20	MCM3AP (ENSPPYG00000011532) #21	ENSPPYG00000011535 #22	C21orf58 (ENSPPYG00000011536) #23	PCNT (ENSPPYG00000011537)	DIP2A (ENSPPYG00000011538) #25	S100B (ENSPPYG00000011539) #26	PRMT2 (ENSPPYG00000011540) #27
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Cebidae	ANCESTRAL SPECIES	32	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00530000064552	ENSGT00940000160683 #27
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00950000182895.a.a.a.b.f ##7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00530000064552	ENSGT00940000160683 #27
Capuchin	MODERN SPECIES	112	ENSCCAG00000024614 ##7	PTTG1IP (ENSCCAG00000030590) #8	ITGB2 (ENSCCAG00000001137) #9	SLX9 (ENSCCAG00000036236) #10	ADARB1 (ENSCCAG00000029934) #11	POFUT2 (ENSCCAG00000020926) #12	COL18A1 (ENSCCAG00000036606)	SLC19A1 (ENSCCAG00000026323) #13	PCBP3 (ENSCCAG00000024561) #14	COL6A1 (ENSCCAG00000028601) #15	COL6A2 (ENSCCAG00000027356) #16	FTCD (ENSCCAG00000009041) #17	SPATC1L (ENSCCAG00000030470) #19	LSS (ENSCCAG00000022848) #20	MCM3AP (ENSCCAG00000032869) #21	YBEY (ENSCCAG00000035845) #22	C21orf58 (ENSCCAG00000032298) #23	PCNT (ENSCCAG00000036461)	DIP2A (ENSCCAG00000026675) #25	ENSCCAG00000016321	PRMT2 (ENSCCAG00000028685) #27	ENSCCAG00000027671
Bolivian squirrel monkey	MODERN SPECIES	155	ENSSBOG00000022415	COLEC11 (ENSSBOG00000026886)	ALLC (ENSSBOG00000025429)	DCDC2C (ENSSBOG00000023428)	ENSSBOG00000021838	POFUT2 (ENSSBOG00000026751) #12	COL18A1 (ENSSBOG00000026331)	SLC19A1 (ENSSBOG00000024098) #13	PCBP3 (ENSSBOG00000005789) #14	COL6A1 (ENSSBOG00000033262) #15	COL6A2 (ENSSBOG00000024612) #16	FTCD (ENSSBOG00000032120) #17	SPATC1L (ENSSBOG00000028722) #19	LSS (ENSSBOG00000030101) #20	MCM3AP (ENSSBOG00000024259) #21	YBEY (ENSSBOG00000030954) #22	ENSSBOG00000029549 #23	PCNT (ENSSBOG00000031686)	ENSSBOG00000034552	DIP2A (ENSSBOG00000027645) #25	ENSSBOG00000027563	PRMT2 (ENSSBOG00000030953) #27
Marmoset	MODERN SPECIES	13	ITGB2 (ENSCJAG00000010554) #9	SLX9 (ENSCJAG00000010599) #10	ENSCJAG00000071675	ADARB1 (ENSCJAG00000018646) #11	ENSCJAG00000081850 #12	COL18A1 (ENSCJAG00000083421)	ENSCJAG00000081985	SLC19A1 (ENSCJAG00000001943) #13	PCBP3 (ENSCJAG00000077507) #14	COL6A1 (ENSCJAG00000078346) #15	COL6A2 (ENSCJAG00000001863) #16	FTCD (ENSCJAG00000080609) #17	SPATC1L (ENSCJAG00000085076) #19	LSS (ENSCJAG00000086602) #20	MCM3AP (ENSCJAG00000001770) #21	YBEY (ENSCJAG00000080541) #22	ENSCJAG00000001809	PCNT (ENSCJAG00000075934)	DIP2A (ENSCJAG00000001624) #25	ENSCJAG00000001606	PRMT2 (ENSCJAG00000001571) #27	ENSCJAG00000074974
Mas night monkey	MODERN SPECIES	1200																YBEY (ENSANAG00000021957) #22	C21orf58 (ENSANAG00000027423) #23	PCNT (ENSANAG00000023500)	DIP2A (ENSANAG00000021722) #25	S100B (ENSANAG00000019592) #26	PRMT2 (ENSANAG00000030484) #27
Tarsier	MODERN SPECIES	3858										COL6A1 (ENSTSYG00000014354) #15	COL6A2 (ENSTSYG00000002945) #16	FTCD (ENSTSYG00000001539) #17	SPATC1L (ENSTSYG00000006728) #19	LSS (ENSTSYG00000005870) #20	MCM3AP (ENSTSYG00000007422) #21	YBEY (ENSTSYG00000013467) #22
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Lemuriformes	ANCESTRAL SPECIES	88	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Lemuriformes_a	ANCESTRAL SPECIES	181	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b.s #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00940000173680	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Greater bamboo lemur	MODERN SPECIES	646															MCM3AP (ENSPSMG00000005342) #21	YBEY (ENSPSMG00000005292) #22	ENSPSMG00000005278	PCNT (ENSPSMG00000005262)	DIP2A (ENSPSMG00000005174) #25	S100B (ENSPSMG00000005022) #26	ENSPSMG00000005019	PRMT2 (ENSPSMG00000004935) #27
Coquerels sifaka	MODERN SPECIES	543	ENSPCOG00000019098 #7	PTTG1IP (ENSPCOG00000020581) #8	ITGB2 (ENSPCOG00000014923) #9	SLX9 (ENSPCOG00000020078) #10	ADARB1 (ENSPCOG00000020406) #11	POFUT2 (ENSPCOG00000016074) #12	COL18A1 (ENSPCOG00000014698)	SLC19A1 (ENSPCOG00000027927) #13	PCBP3 (ENSPCOG00000013797) #14	COL6A1 (ENSPCOG00000014806) #15	COL6A2 (ENSPCOG00000016356) #16	FTCD (ENSPCOG00000021020) #17	SPATC1L (ENSPCOG00000025023) #19	LSS (ENSPCOG00000019936) #20	MCM3AP (ENSPCOG00000024498) #21	YBEY (ENSPCOG00000015606) #22	PCNT (ENSPCOG00000014872)	DIP2A (ENSPCOG00000016283) #25	S100B (ENSPCOG00000018301) #26	PRMT2 (ENSPCOG00000028679) #27
Mouse lemur	MODERN SPECIES	24	SUMO3 (ENSMICG00000036688) #7	PTTG1IP (ENSMICG00000028388) #8	ITGB2 (ENSMICG00000002984) #9	SLX9 (ENSMICG00000047718) #10	ADARB1 (ENSMICG00000008433) #11	POFUT2 (ENSMICG00000035479) #12	COL18A1 (ENSMICG00000037125)	SLC19A1 (ENSMICG00000035898) #13	PCBP3 (ENSMICG00000012679) #14	ENSMICG00000033569	COL6A2 (ENSMICG00000033173) #16	FTCD (ENSMICG00000002458) #17	SPATC1L (ENSMICG00000027207) #19	LSS (ENSMICG00000004051) #20	MCM3AP (ENSMICG00000000801) #21	YBEY (ENSMICG00000000809) #22	ENSMICG00000047063 #23	PCNT (ENSMICG00000000816)	DIP2A (ENSMICG00000047083) #25	S100B (ENSMICG00000038064) #26	PRMT2 (ENSMICG00000015531) #27	ENSMICG00000033410	ENSMICG00000046801	ENSMICG00000046990	ENSMICG00000047484	ENSMICG00000046324
Bushbaby	MODERN SPECIES	243	ENSOGAG00000027833	ENSOGAG00000026126	ADARB1 (ENSOGAG00000017167) #11	POFUT2 (ENSOGAG00000017168) #12	ENSOGAG00000024946	COL18A1 (ENSOGAG00000000892)	SLC19A1 (ENSOGAG00000032361) #13	ENSOGAG00000008044	ENSOGAG00000024419	COL6A1 (ENSOGAG00000031247) #15	COL6A2 (ENSOGAG00000005077) #16	FTCD (ENSOGAG00000008226) #17	SPATC1L (ENSOGAG00000008230) #19	LSS (ENSOGAG00000009183) #20	MCM3AP (ENSOGAG00000009196) #21	YBEY (ENSOGAG00000029299) #22	PCNT (ENSOGAG00000001796)	DIP2A (ENSOGAG00000013139) #25	PRMT2 (ENSOGAG00000013155) #27
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Suina	ANCESTRAL SPECIES	69										ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00960000191699 #24	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Pig	MODERN SPECIES	104											COL6A2 (ENSSSCG00000028022) #16	FTCD (ENSSSCG00000027926) #17	SPATC1L (ENSSSCG00000029847) #19	LSS (ENSSSCG00000021418) #20	MCM3AP (ENSSSCG00000026344) #21	YBEY (ENSSSCG00000033116) #22	ENSSSCG00000040897	ENSSSCG00000055020 #24	DIP2A (ENSSSCG00000035657) #25	ENSSSCG00000026140 #26	PRMT2 (ENSSSCG00000022575) #27	ENSSSCG00000057163	ENSSSCG00000043836
Chacoan peccary	MODERN SPECIES	789										ENSCWAG00000006944	COL6A2 (ENSCWAG00000007019) #16	FTCD (ENSCWAG00000007067) #17	SPATC1L (ENSCWAG00000007130) #19	LSS (ENSCWAG00000007171) #20	MCM3AP (ENSCWAG00000007333) #21	YBEY (ENSCWAG00000007409) #22	ENSCWAG00000007453 #24	DIP2A (ENSCWAG00000007571) #25	S100B (ENSCWAG00000010235) #26	PRMT2 (ENSCWAG00000010323) #27
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Cetacea	ANCESTRAL SPECIES	10	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.p
Odontoceti	ANCESTRAL SPECIES	9	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000162768.B	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.p
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	16	NOD1 (ENSPCTG00005005030)	ZNRF2 (ENSPCTG00005005053)	ENSPCTG00005005086	MTURN (ENSPCTG00005005111)	PLEKHA8 (ENSPCTG00005005155)	FKBP14 (ENSPCTG00005005226)	SCRN1 (ENSPCTG00005005255)	WIPF3 (ENSPCTG00005005378)	PRR15 (ENSPCTG00005005430)	CHN2 (ENSPCTG00005005501)	CPVL (ENSPCTG00005005992)	TRIL (ENSPCTG00005006053)	CREB5 (ENSPCTG00005006108)	JAZF1 (ENSPCTG00005006349)	ENSPCTG00005006433	ENSPCTG00005006916 #22	ENSPCTG00005006930	HIBADH (ENSPCTG00005006944)	EVX1 (ENSPCTG00005006960)	HOXA13 (ENSPCTG00005006985)	HOXA11 (ENSPCTG00005000283)	ENSPCTG00005000317	ENSPCTG00005000324	HOXA9 (ENSPCTG00005000359)	HOXA7 (ENSPCTG00005000380)	HOXA6 (ENSPCTG00005000391)	HOXA5 (ENSPCTG00005000400)	HOXA4 (ENSPCTG00005000409)	HOXA2 (ENSPCTG00005000420)	HOXA1 (ENSPCTG00005000429)	SKAP2 (ENSPCTG00005000453)
Sperm whale	MODERN SPECIES	19	BRD9 (ENSPCTG00005001199) ##22	ENSPCTG00005001162	TPPP (ENSPCTG00005001138)	SLC9A3 (ENSPCTG00005001031)	EXOC3 (ENSPCTG00005000986)	AHRR (ENSPCTG00005000954)	PDCD6 (ENSPCTG00005000919)	SDHA (ENSPCTG00005000654)	CCDC127 (ENSPCTG00005000571)	LRRC14B (ENSPCTG00005000554)	ENSPCTG00005000466	PRMT2 (ENSPCTG00005000392) #27	S100B (ENSPCTG00005020925) #26	DIP2A (ENSPCTG00005020857) #25	ENSPCTG00005020792 #21	YBEY (ENSPCTG00005020716) #22	ENSPCTG00005020614 #24	ENSPCTG00005020548 #20	SPATC1L (ENSPCTG00005020505) #19	FTCD (ENSPCTG00005020224) #17	COL6A2 (ENSPCTG00005020074) #16	COL6A1 (ENSPCTG00005019551)	PCBP3 (ENSPCTG00005019331) #14	SLC19A1 (ENSPCTG00005019281) #13	POFUT2 (ENSPCTG00005017994) #12	ADARB1 (ENSPCTG00005017937) #11	ITGB2 (ENSPCTG00005017857) #9	ENSPCTG00005017771	ENSPCTG00005017676	LRRC3 (ENSPCTG00005017660)	ENSPCTG00005017608
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.p
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.p
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000162768.B	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00960000191699 #24	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.p
Beluga whale	MODERN SPECIES	111	UBE2G2 (ENSDLEG00000020904)	ENSDLEG00000020900 ##7	PTTG1IP (ENSDLEG00000020895) #8	ITGB2 (ENSDLEG00000020885) #9	ENSDLEG00000020878 #10	ADARB1 (ENSDLEG00000020872) #11	POFUT2 (ENSDLEG00000020860) #12	COL18A1 (ENSDLEG00000020803)	SLC19A1 (ENSDLEG00000020790) #13	ENSDLEG00000020780	ENSDLEG00000020776 #16	FTCD (ENSDLEG00000020687) #17	SPATC1L (ENSDLEG00000020661) #19	LSS (ENSDLEG00000020129) #20	MCM3AP (ENSDLEG00000020070) #21	YBEY (ENSDLEG00000020063) #22	DIP2A (ENSDLEG00000018787) #25	S100B (ENSDLEG00000018617) #26	PRMT2 (ENSDLEG00000018566) #27	ENSDLEG00000018551	ENSDLEG00000018519	ACR (ENSDLEG00000018484)	SHANK3 (ENSDLEG00000018244)	ARSA (ENSDLEG00000018210)	MAPK8IP2 (ENSDLEG00000018192)	CHKB (ENSDLEG00000018187)	CPT1B (ENSDLEG00000018146)	ODF3B (ENSDLEG00000018114)	SCO2 (ENSDLEG00000018105)	NCAPH2 (ENSDLEG00000018066)	LMF2 (ENSDLEG00000018051)
Narwhal	MODERN SPECIES	297	ITGB2 (ENSMMNG00015001076) #9	SLX9 (ENSMMNG00015001036) #10	ADARB1 (ENSMMNG00015001009) #11	POFUT2 (ENSMMNG00015000876) #12	ENSMMNG00015000658	SLC19A1 (ENSMMNG00015000587) #13	PCBP3 (ENSMMNG00015000534) #14	ENSMMNG00015000412	ENSMMNG00015000368	ENSMMNG00015000354	COL6A2 (ENSMMNG00015000293) #16	FTCD (ENSMMNG00015000207) #17	SPATC1L (ENSMMNG00015000171) #19	LSS (ENSMMNG00015000081) #20	MCM3AP (ENSMMNG00015002634) #21	YBEY (ENSMMNG00015002581) #22	ENSMMNG00015002525 #24	DIP2A (ENSMMNG00015002213) #25	S100B (ENSMMNG00015002108) #26	PRMT2 (ENSMMNG00015002069) #27
Vaquita	MODERN SPECIES	15	PTTG1IP (ENSPSNG00000013293) #8	ENSPSNG00000013374 ##9	ENSPSNG00000013509	SLX9 (ENSPSNG00000013591) #10	ADARB1 (ENSPSNG00000013670) #11	POFUT2 (ENSPSNG00000013804) #12	COL18A1 (ENSPSNG00000013985)	SLC19A1 (ENSPSNG00000014338) #13	ENSPSNG00000014382	COL6A1 (ENSPSNG00000014616) #15	COL6A2 (ENSPSNG00000014738) #16	FTCD (ENSPSNG00000014870) #17	SPATC1L (ENSPSNG00000015232) #19	LSS (ENSPSNG00000015377) #20	MCM3AP (ENSPSNG00000015503) #21	ENSPSNG00000015602 #22	ENSPSNG00000015771	ENSPSNG00000015809	ENSPSNG00000015929 #25	ENSPSNG00000016067 #25	S100B (ENSPSNG00000016108) #26	PRMT2 (ENSPSNG00000016182) #27	ENSPSNG00000016334
Dolphin	MODERN SPECIES	1333														LSS (ENSTTRG00000000356) #20	MCM3AP (ENSTTRG00000000357) #21	ENSTTRG00000000360 #22	ENSTTRG00000000361 #23	ENSTTRG00000000362
Blue whale	MODERN SPECIES	15	UBE2G2 (ENSBMSG00010007343)	SUMO3 (ENSBMSG00010007354) #7	PTTG1IP (ENSBMSG00010007362) #8	ITGB2 (ENSBMSG00010007391) #9	SLX9 (ENSBMSG00010007433) #10	ADARB1 (ENSBMSG00010003764) #11	POFUT2 (ENSBMSG00010003795) #12	COL18A1 (ENSBMSG00010003836)	SLC19A1 (ENSBMSG00010003963) #13	PCBP3 (ENSBMSG00010003986) #14	COL6A1 (ENSBMSG00010004019) #15	COL6A2 (ENSBMSG00010004034) #16	FTCD (ENSBMSG00010004051) #17	LSS (ENSBMSG00010004134) #20	MCM3AP (ENSBMSG00010004232) #21	ENSBMSG00010004263 #22	ENSBMSG00010004286 #24	DIP2A (ENSBMSG00010004306) #25	S100B (ENSBMSG00010004349) #26	PRMT2 (ENSBMSG00010004381) #27
Pecora	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.p.a	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.b	ENSGT00940000159602.c.b	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00510000046499.`c.a.c.a.a
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000013199 #8	ITGB2 (ENSCHYG00000013305) #9	SLX9 (ENSCHYG00000013417) #10	ADARB1 (ENSCHYG00000013492) #11	POFUT2 (ENSCHYG00000013580) #12	ENSCHYG00000013809	SLC19A1 (ENSCHYG00000014939) #13	PCBP3 (ENSCHYG00000015231) #14	ENSCHYG00000015578	COL6A1 (ENSCHYG00000015735) #15	COL6A2 (ENSCHYG00000016288) #16	FTCD (ENSCHYG00000017995) #17	SPATC1L (ENSCHYG00000018089) #19	LSS (ENSCHYG00000018157) #20	MCM3AP (ENSCHYG00000018660) #21	YBEY (ENSCHYG00000019060) #22	PCNT (ENSCHYG00000019684)	DIP2A (ENSCHYG00000021088) #25	S100B (ENSCHYG00000022569) #26	PRMT2 (ENSCHYG00000022622) #27	ENSCHYG00000022791	FBXO25 (ENSCHYG00000022825)	TDRP (ENSCHYG00000022964)	ENSCHYG00000023002	ENSCHYG00000023032	RUNX1 (ENSCHYG00000023067)	SETD4 (ENSCHYG00000023190)	ENSCHYG00000023267	ENSCHYG00000023358	ENSCHYG00000023378	ENSCHYG00000023406
Percora_a	ANCESTRAL SPECIES	7	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.b	ENSGT00940000159602.c.a	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00510000046499.`c.a.c.a.a
Siberian musk deer	MODERN SPECIES	1185	ITGB2 (ENSMMSG00000012884) #9	SLX9 (ENSMMSG00000012926) #10	ENSMMSG00000012948	ADARB1 (ENSMMSG00000012958) #11	POFUT2 (ENSMMSG00000012988) #12	COL18A1 (ENSMMSG00000013041)	SLC19A1 (ENSMMSG00000013111) #13	PCBP3 (ENSMMSG00000013149) #14	ENSMMSG00000013267	ENSMMSG00000013286	COL6A2 (ENSMMSG00000013324) #16	FTCD (ENSMMSG00000012880) #17	SPATC1L (ENSMMSG00000012984) #19	LSS (ENSMMSG00000013009) #20	MCM3AP (ENSMMSG00000013071) #21	YBEY (ENSMMSG00000013126) #22	PCNT (ENSMMSG00000013234)	DIP2A (ENSMMSG00000013513) #25	S100B (ENSMMSG00000013818) #26	PRMT2 (ENSMMSG00000013848) #27	ENSMMSG00000013903	FBXO25 (ENSMMSG00000013966)	TDRP (ENSMMSG00000014000)	ENSMMSG00000014024	RUNX1 (ENSMMSG00000014047)	SETD4 (ENSMMSG00000014122)	ENSMMSG00000014178	ENSMMSG00000014188	CBR3 (ENSMMSG00000014250)	DOP1B (ENSMMSG00000014259)	MORC3 (ENSMMSG00000014310)
Bovidae	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a	ENSGT00940000159602.c.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d
Bovinae	ANCESTRAL SPECIES	6	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a.a	ENSGT00940000159602.c.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d
Bos	ANCESTRAL SPECIES	7	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.f	ENSGT00390000017888	ENSGT00960000186612.A.p.a.a	ENSGT00940000159602.c.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d
Bos_b	ANCESTRAL SPECIES	5	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.f	ENSGT00390000017888	ENSGT00960000186612.A.p.a.b	ENSGT00960000186612.A.p.a.a	ENSGT00940000159602.c.a	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d.c	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005019400 ##7	PTTG1IP (ENSBIXG00005019381) #8	ITGB2 (ENSBIXG00005019335) #9	SLX9 (ENSBIXG00005019260) #10	ADARB1 (ENSBIXG00005019197) #11	POFUT2 (ENSBIXG00005019083) #12	COL18A1 (ENSBIXG00005018920)	SLC19A1 (ENSBIXG00005018773) #13	PCBP3 (ENSBIXG00005018711) #14	ENSBIXG00005018619	COL6A2 (ENSBIXG00005006450) #16	FTCD (ENSBIXG00005018494) #17	SPATC1L (ENSBIXG00005018481) #19	LSS (ENSBIXG00005018442) #20	MCM3AP (ENSBIXG00005018185) #21	YBEY (ENSBIXG00005018157) #22	ENSBIXG00005018060	DIP2A (ENSBIXG00005002893) #25	S100B (ENSBIXG00005017738) #26	PRMT2 (ENSBIXG00005017685) #27	ENSBIXG00005002856	FBXO25 (ENSBIXG00005017564)	ENSBIXG00005017443	ENSBIXG00005017410	ENSBIXG00005017402	ENSBIXG00005017394	RUNX1 (ENSBIXG00005005427)	SETD4 (ENSBIXG00005017211)	ENSBIXG00005017175	ENSBIXG00005017141	ENSBIXG00005017110
Cow	MODERN SPECIES		PTTG1IP (ENSBTAG00000021771) #8	ITGB2 (ENSBTAG00000017060) #9	SLX9 (ENSBTAG00000017010) #10	ADARB1 (ENSBTAG00000017486) #11	POFUT2 (ENSBTAG00000007818) #12	COL18A1 (ENSBTAG00000023907)	SLC19A1 (ENSBTAG00000024162) #13	PCBP3 (ENSBTAG00000030775) #14	ENSBTAG00000048318	COL6A1 (ENSBTAG00000011802)	COL6A2 (ENSBTAG00000019269) #16	FTCD (ENSBTAG00000020404) #17	SPATC1L (ENSBTAG00000020409) #19	LSS (ENSBTAG00000018936) #20	MCM3AP (ENSBTAG00000003148) #21	YBEY (ENSBTAG00000003161) #22	C1H21orf58 (ENSBTAG00000021984)	PCNT (ENSBTAG00000030670)	DIP2A (ENSBTAG00000011495) #25	S100B (ENSBTAG00000004777) #26	PRMT2 (ENSBTAG00000005503) #27	ENSBTAG00000052513	FBXO25 (ENSBTAG00000007039)	TDRP (ENSBTAG00000043957)	ENSBTAG00000052599	ENSBTAG00000053000	ENSBTAG00000046447	RUNX1 (ENSBTAG00000004742)	SETD4 (ENSBTAG00000018682)	CBR1 (ENSBTAG00000023384)	ENSBTAG00000052342
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000158193	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b	ENSGT00390000004915.b.e	ENSGT00390000017888	ENSGT00960000186612.A.p.a.a	ENSGT00940000159602.d	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00390000016421.b.a
Domestic yak	MODERN SPECIES		ENSBGRG00000000186 ##7	PTTG1IP (ENSBGRG00000000193) #8	ITGB2 (ENSBGRG00000000208) #9	SLX9 (ENSBGRG00000000257) #10	ADARB1 (ENSBGRG00000000280) #11	POFUT2 (ENSBGRG00000000326) #12	SLC19A1 (ENSBGRG00000000631) #13	ENSBGRG00000000644	PCBP3 (ENSBGRG00000000669) #14	COL6A1 (ENSBGRG00000000813) #15	COL6A2 (ENSBGRG00000000863) #16	FTCD (ENSBGRG00000000949) #17	SPATC1L (ENSBGRG00000001038) #19	LSS (ENSBGRG00000001100) #20	MCM3AP (ENSBGRG00000001560) #21	ENSBGRG00000001586 #22	ENSBGRG00000001632 #23	ENSBGRG00000001685 #24	DIP2A (ENSBGRG00000001765) #25	S100B (ENSBGRG00000002365) #26	PRMT2 (ENSBGRG00000002397) #27	ENSBGRG00000002455	FBXO25 (ENSBGRG00000002483)	ENSBGRG00000002585	ENSBGRG00000002610	RUNX1 (ENSBGRG00000002635)	ENSBGRG00000002722	ENSBGRG00000002732	SETD4 (ENSBGRG00000002744)	CBR1 (ENSBGRG00000002778)	DOP1B (ENSBGRG00000002831)
Wild yak	MODERN SPECIES	1401										COL6A1 (ENSBMUG00000019539) #15	COL6A2 (ENSBMUG00000019350) #16	FTCD (ENSBMUG00000019201) #17	SPATC1L (ENSBMUG00000019099) #19	LSS (ENSBMUG00000019069) #20	MCM3AP (ENSBMUG00000018534) #21	YBEY (ENSBMUG00000018009) #22	PCNT (ENSBMUG00000017747)	DIP2A (ENSBMUG00000017386) #25	S100B (ENSBMUG00000017272) #26	PRMT2 (ENSBMUG00000017225) #27	FBXO25 (ENSBMUG00000017147)	TDRP (ENSBMUG00000017069)	ENSBMUG00000017055
American bison	MODERN SPECIES	2975	PTTG1IP (ENSBBBG00000015164) #8	ITGB2 (ENSBBBG00000003799) #9	SLX9 (ENSBBBG00000003802) #10	ADARB1 (ENSBBBG00000001357) #11	ENSBBBG00000001345 #12	ENSBBBG00000001334 #12	ENSBBBG00000001319	SLC19A1 (ENSBBBG00000001312) #13	PCBP3 (ENSBBBG00000015403) #14	COL6A1 (ENSBBBG00000015494) #15	COL6A2 (ENSBBBG00000015610) #16	FTCD (ENSBBBG00000015621) #17	SPATC1L (ENSBBBG00000015631) #19	LSS (ENSBBBG00000002644) #20	MCM3AP (ENSBBBG00000015748) #21	YBEY (ENSBBBG00000015798) #22	ENSBBBG00000003968	DIP2A (ENSBBBG00000016225) #25	S100B (ENSBBBG00000016247) #26	PRMT2 (ENSBBBG00000016343) #27	ENSBBBG00000016361	FBXO25 (ENSBBBG00000016404)	TDRP (ENSBBBG00000016413)	ENSBBBG00000016420	ENSBBBG00000016432	RUNX1 (ENSBBBG00000016523)	SETD4 (ENSBBBG00000016605)	ENSBBBG00000007614	ENSBBBG00000016692	ENSBBBG00000006958	DOP1B (ENSBBBG00000016914)
Caprinae	ANCESTRAL SPECIES	8	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00390000004915.b	ENSGT00390000017888	ENSGT00960000186612.A.p.a	ENSGT00940000159602.c.a.a	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499.`c.a.d	ENSGT00510000046499.`c.a.c.a.a	ENSGT00510000046499.`c.a.c.a.b	ENSGT00940000162541	ENSGT00390000016421.b.a	ENSGT00940000160495
Goat	MODERN SPECIES		PTTG1IP (ENSCHIG00000021017) #8	ITGB2 (ENSCHIG00000014136) #9	SLX9 (ENSCHIG00000017685) #10	ADARB1 (ENSCHIG00000018259) #11	POFUT2 (ENSCHIG00000000514) #12	ENSCHIG00000020589	ENSCHIG00000013263	SLC19A1 (ENSCHIG00000025066) #13	PCBP3 (ENSCHIG00000015841) #14	ENSCHIG00000004889	COL6A2 (ENSCHIG00000018004) #16	FTCD (ENSCHIG00000010407) #17	SPATC1L (ENSCHIG00000023038) #19	LSS (ENSCHIG00000013212) #20	MCM3AP (ENSCHIG00000025098) #21	YBEY (ENSCHIG00000008074) #22	ENSCHIG00000003698	DIP2A (ENSCHIG00000007147) #25	S100B (ENSCHIG00000021487) #26	PRMT2 (ENSCHIG00000011147) #27	FBXO25 (ENSCHIG00000023287)	TDRP (ENSCHIG00000018317)	ENSCHIG00000010039	ENSCHIG00000020662	RUNX1 (ENSCHIG00000016792)	SETD4 (ENSCHIG00000022771)	ENSCHIG00000004827	ENSCHIG00000011667	ENSCHIG00000019223	ENSCHIG00000007290	CBR3 (ENSCHIG00000021573)
Rambouillet Sheep	MODERN SPECIES		ITGB2 (ENSOARG00020007059) #9	SLX9 (ENSOARG00020007156) #10	ADARB1 (ENSOARG00020007192) #11	POFUT2 (ENSOARG00020007231) #12	COL18A1 (ENSOARG00020007293)	SLC19A1 (ENSOARG00020007403) #13	ENSOARG00020007438	PCBP3 (ENSOARG00020007496) #14	ENSOARG00020008499	ENSOARG00020008540	COL6A2 (ENSOARG00020008627) #16	FTCD (ENSOARG00020008875) #17	SPATC1L (ENSOARG00020008907) #19	LSS (ENSOARG00020008949) #20	MCM3AP (ENSOARG00020009410) #21	YBEY (ENSOARG00020009539) #22	ATP5MD (ENSOARG00020009793)	DIP2A (ENSOARG00020009881) #25	S100B (ENSOARG00020013409) #26	PRMT2 (ENSOARG00020013448) #27	ENSOARG00020013592	FBXO25 (ENSOARG00020013642)	ENSOARG00020013896	ENSOARG00020013947	ENSOARG00020013981	ENSOARG00020014033	RUNX1 (ENSOARG00020014172)	SETD4 (ENSOARG00020014436)	ENSOARG00020014533	ENSOARG00020014594	ENSOARG00020014679
Camelidae	ANCESTRAL SPECIES		ENSGT00950000182895.a.a.a.b.f ##7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26
Arabian camel	MODERN SPECIES		ENSCDRG00005021881 ##7	PTTG1IP (ENSCDRG00005021882) #8	ITGB2 (ENSCDRG00005021886) #9	SLX9 (ENSCDRG00005021887) #10	ADARB1 (ENSCDRG00005021888) #11	ENSCDRG00005021889 #12	ENSCDRG00005021890	ENSCDRG00005021892 #13	ENSCDRG00005021894	ENSCDRG00005021895	COL6A2 (ENSCDRG00005021902) #16	FTCD (ENSCDRG00005021903) #17	SPATC1L (ENSCDRG00005021904) #19	LSS (ENSCDRG00005021905) #20	MCM3AP (ENSCDRG00005021907) #21	ENSCDRG00005000062 #22	PCNT (ENSCDRG00005000201)	DIP2A (ENSCDRG00005000971) #25	S100B (ENSCDRG00005006127) #26	ENSCDRG00005006148	PRMT2 (ENSCDRG00005006179) #27
Alpaca	MODERN SPECIES	2496														ENSVPAG00000002301 #21	ENSVPAG00000002305	ENSVPAG00000002309 #22
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Equus	ANCESTRAL SPECIES	13	ENSGT00940000157640	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Horse	MODERN SPECIES	18	ITGB2 (ENSECAG00000023061) #9	SLX9 (ENSECAG00000016590) #10	ADARB1 (ENSECAG00000019917) #11	POFUT2 (ENSECAG00000004992) #12	COL18A1 (ENSECAG00000016361)	SLC19A1 (ENSECAG00000002116) #13	PCBP3 (ENSECAG00000012413) #14	ENSECAG00000047101	COL6A1 (ENSECAG00000022731) #15	COL6A2 (ENSECAG00000019436) #16	FTCD (ENSECAG00000011979) #17	SPATC1L (ENSECAG00000006870) #19	LSS (ENSECAG00000008899) #20	ENSECAG00000047281	MCM3AP (ENSECAG00000018980) #21	YBEY (ENSECAG00000019348) #22	ENSECAG00000049237 #23	PCNT (ENSECAG00000022455)	ENSECAG00000048453	DIP2A (ENSECAG00000052329) #25	S100B (ENSECAG00000012395) #26	PRMT2 (ENSECAG00000012406) #27
Donkey	MODERN SPECIES	9	ENSEASG00005036911 #9	ENSEASG00005018136 #9	ENSEASG00005020183 #9	ENSEASG00005032799 #9	SLX9 (ENSEASG00005023956) #10	ADARB1 (ENSEASG00005007085) #11	POFUT2 (ENSEASG00005007081) #12	COL18A1 (ENSEASG00005038430)	SLC19A1 (ENSEASG00005007070) #13	PCBP3 (ENSEASG00005007068) #14	COL6A1 (ENSEASG00005035660) #15	COL6A2 (ENSEASG00005007037) #16	FTCD (ENSEASG00005007018) #17	SPATC1L (ENSEASG00005007013) #19	LSS (ENSEASG00005006856) #20	ENSEASG00005006445 #22	MCM3AP (ENSEASG00005006458) #21	ENSEASG00005025745 #23	PCNT (ENSEASG00005006433)	DIP2A (ENSEASG00005002841) #25	S100B (ENSEASG00005028449) #26	ENSEASG00005002664 #27	ENSEASG00005012665	ENSEASG00005012661	SH2D4A (ENSEASG00005012656)	CSGALNACT1 (ENSEASG00005012653)	ENSEASG00005012646	ENSEASG00005012623	POMK (ENSEASG00005027446)	FNTA (ENSEASG00005012598)	ENSEASG00005012593
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00960000191015	ENSGT00940000162768.B	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00960000191015	ENSGT00940000162768.B	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Microbat	MODERN SPECIES	1538											COL6A2 (ENSMLUG00000015413) #16	FTCD (ENSMLUG00000017344) #17	SPATC1L (ENSMLUG00000017345) #19	LSS (ENSMLUG00000010452) #20	ENSMLUG00000010492 #21	YBEY (ENSMLUG00000024183) #22	ENSMLUG00000007442 #23	PCNT (ENSMLUG00000007473)	DIP2A (ENSMLUG00000007571) #25	ENSMLUG00000022882 #26
Greater horseshoe bat	MODERN SPECIES	11	SLX9 (ENSRFEG00010001351) #10	ADARB1 (ENSRFEG00010001412) #11	ENSRFEG00010001456	ENSRFEG00010001475 #12	ENSRFEG00010001505 #12	ENSRFEG00010001539	SLC19A1 (ENSRFEG00010001553) #13	ENSRFEG00010001565	ENSRFEG00010001580	ENSRFEG00010001629	COL6A1 (ENSRFEG00010001707) #15	COL6A2 (ENSRFEG00010001753) #16	ENSRFEG00010001831 #17	ENSRFEG00010001886 #19	MCM3AP (ENSRFEG00010001906) #21	YBEY (ENSRFEG00010001954) #22	LSS (ENSRFEG00010002001) #20	ENSRFEG00010002046 #19	ENSRFEG00010002070 #17	ENSRFEG00010002090 #23	ENSRFEG00010002127	DIP2A (ENSRFEG00010002401) #25	S100B (ENSRFEG00010002870) #26	PRMT2 (ENSRFEG00010002906) #27
Carnivora	ANCESTRAL SPECIES	10	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Felidae	ANCESTRAL SPECIES	9	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Panthera	ANCESTRAL SPECIES	17	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Panthera_a	ANCESTRAL SPECIES	71	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00960000191699 #24	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
leopard	MODERN SPECIES	167	UBE2G2 (ENSPPRG00000003006)	SUMO3 (ENSPPRG00000002862) #7	PTTG1IP (ENSPPRG00000001982) #8	ITGB2 (ENSPPRG00000001670) #9	SLX9 (ENSPPRG00000012813) #10	ADARB1 (ENSPPRG00000012281) #11	POFUT2 (ENSPPRG00000010612) #12	SLC19A1 (ENSPPRG00000004605) #13	PCBP3 (ENSPPRG00000003933) #14	COL6A1 (ENSPPRG00000000566) #15	COL6A2 (ENSPPRG00000024558) #16	FTCD (ENSPPRG00000011402) #17	SPATC1L (ENSPPRG00000008783) #19	LSS (ENSPPRG00000008675) #20	MCM3AP (ENSPPRG00000006018) #21	YBEY (ENSPPRG00000003325) #22	DIP2A (ENSPPRG00000023404) #25	S100B (ENSPPRG00000012850) #26	PRMT2 (ENSPPRG00000011758) #27
lion	MODERN SPECIES	82									ENSPLOG00000012660	COL6A1 (ENSPLOG00000012855) #15	COL6A2 (ENSPLOG00000013448) #16	FTCD (ENSPLOG00000013562) #17	SPATC1L (ENSPLOG00000013791) #19	LSS (ENSPLOG00000013929) #20	MCM3AP (ENSPLOG00000014376) #21	YBEY (ENSPLOG00000014501) #22	ENSPLOG00000014936 #24	DIP2A (ENSPLOG00000015002) #25	S100B (ENSPLOG00000015114) #26	PRMT2 (ENSPLOG00000015178) #27	ENSPLOG00000015307
Tiger	MODERN SPECIES	64											ENSPTIG00000021416	COL6A2 (ENSPTIG00000001338) #16	FTCD (ENSPTIG00000006361) #17	SPATC1L (ENSPTIG00000008904) #19	LSS (ENSPTIG00000010334) #20	YBEY (ENSPTIG00000015444) #22	ENSPTIG00000016857 #23	DIP2A (ENSPTIG00000001530) #25	S100B (ENSPTIG00000012836) #26
Cat	MODERN SPECIES	240	TSPEAR (ENSFCAG00000001772)	UBE2G2 (ENSFCAG00000042355)	ITGB2 (ENSFCAG00000002284) #9	SLX9 (ENSFCAG00000038348) #10	ADARB1 (ENSFCAG00000009665) #11	POFUT2 (ENSFCAG00000043455) #12	COL18A1 (ENSFCAG00000043124)	SLC19A1 (ENSFCAG00000026096) #13	PCBP3 (ENSFCAG00000014812) #14	COL6A1 (ENSFCAG00000014813) #15	COL6A2 (ENSFCAG00000014814) #16	FTCD (ENSFCAG00000014815) #17	SPATC1L (ENSFCAG00000014816) #19	LSS (ENSFCAG00000014817) #20	MCM3AP (ENSFCAG00000014818) #21	ENSFCAG00000032854 #22	CC2H21orf58 (ENSFCAG00000014819) #23	ENSFCAG00000052991 #24	DIP2A (ENSFCAG00000014821) #25	S100B (ENSFCAG00000037747) #26	PRMT2 (ENSFCAG00000014823) #27	ENSFCAG00000050465
Caniformia	ANCESTRAL SPECIES		ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Canidae	ANCESTRAL SPECIES	39	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.i #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a.i #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00960000186612.A.h
Dingo	MODERN SPECIES	63	ENSCAFG00020019434 ##7	PTTG1IP (ENSCAFG00020019438) #8	ITGB2 (ENSCAFG00020019439) #9	SLX9 (ENSCAFG00020019440) #10	ADARB1 (ENSCAFG00020019446) #11	POFUT2 (ENSCAFG00020019455) #12	ENSCAFG00020019463	SLC19A1 (ENSCAFG00020019465) #13	ENSCAFG00020019472	ENSCAFG00020019481	COL6A2 (ENSCAFG00020019491) #16	FTCD (ENSCAFG00020019496) #17	SPATC1L (ENSCAFG00020019504) #19	LSS (ENSCAFG00020019508) #20	MCM3AP (ENSCAFG00020019509) #21	YBEY (ENSCAFG00020019514) #22	PCNT (ENSCAFG00020019525)	DIP2A (ENSCAFG00020019589) #25	S100B (ENSCAFG00020020683) #26	ENSCAFG00020020694 #27	ENSCAFG00020020719
Dog	MODERN SPECIES	24	ENSCAFG00845021390 #7	PTTG1IP (ENSCAFG00845021456) #8	ITGB2 (ENSCAFG00845021592) #9	SLX9 (ENSCAFG00845021885) #10	ADARB1 (ENSCAFG00845021975) #11	POFUT2 (ENSCAFG00845022063) #12	COL18A1 (ENSCAFG00845022231)	ENSCAFG00845023388 #13	PCBP3 (ENSCAFG00845023560) #14	COL6A1 (ENSCAFG00845024031) #15	COL6A2 (ENSCAFG00845024255) #16	FTCD (ENSCAFG00845024727) #17	SPATC1L (ENSCAFG00845024849) #19	LSS (ENSCAFG00845024919) #20	MCM3AP (ENSCAFG00845025335) #21	ENSCAFG00845026433 #22	PCNT (ENSCAFG00845026638)	DIP2A (ENSCAFG00845027435) #25	ENSCAFG00845027798 #27
Red fox	MODERN SPECIES	209	ENSVVUG00000023925 ##7	PTTG1IP (ENSVVUG00000023922) #8	ENSVVUG00000023920 #9	ENSVVUG00000023917 #9	ENSVVUG00000023915 #10	ADARB1 (ENSVVUG00000023911) #11	POFUT2 (ENSVVUG00000023908) #12	SLC19A1 (ENSVVUG00000023875) #13	PCBP3 (ENSVVUG00000023862) #14	ENSVVUG00000023855	COL6A2 (ENSVVUG00000023847) #16	FTCD (ENSVVUG00000023843) #17	SPATC1L (ENSVVUG00000023836) #19	LSS (ENSVVUG00000023711) #20	MCM3AP (ENSVVUG00000022975) #21	YBEY (ENSVVUG00000022948) #22	PCNT (ENSVVUG00000022919)	DIP2A (ENSVVUG00000020602) #25	S100B (ENSVVUG00000020498) #26	PRMT2 (ENSVVUG00000020492) #27
Caniformia_b	ANCESTRAL SPECIES		ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Ursidae	ANCESTRAL SPECIES	1	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Ursus	ANCESTRAL SPECIES	94	ENSGT00940000161526.a.a	ENSGT00940000158193	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000162185 #14	ENSGT00950000183546	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a.m #25	ENSGT00530000064552	ENSGT00940000160683 #27
American black bear	MODERN SPECIES	1811													SPATC1L (ENSUAMG00000002867) #19	LSS (ENSUAMG00000002834) #20	MCM3AP (ENSUAMG00000002814) #21	YBEY (ENSUAMG00000002808) #22
Polar bear	MODERN SPECIES	394	ENSUMAG00000025421	UBE2G2 (ENSUMAG00000025420)	ENSUMAG00000025419 #7	PTTG1IP (ENSUMAG00000025418) #8	ITGB2 (ENSUMAG00000025417) #9	SLX9 (ENSUMAG00000025416) #10	ADARB1 (ENSUMAG00000025411) #11	POFUT2 (ENSUMAG00000025410) #12	PCBP3 (ENSUMAG00000025403) #14	ENSUMAG00000025402	COL6A2 (ENSUMAG00000025399) #16	FTCD (ENSUMAG00000025398) #17	ENSUMAG00000025397 #19	LSS (ENSUMAG00000025396) #20	MCM3AP (ENSUMAG00000025237) #21	YBEY (ENSUMAG00000025236) #22	PCNT (ENSUMAG00000025235)	DIP2A (ENSUMAG00000025037) #25	ENSUMAG00000025034	PRMT2 (ENSUMAG00000025033) #27
Giant Panda	MODERN SPECIES		ENSAMEG00000025067 #8	ITGB2 (ENSAMEG00000001924) #9	ENSAMEG00000001918 #10	ADARB1 (ENSAMEG00000001885) #11	ENSAMEG00000025761 #12	ENSAMEG00000001853 #12	COL18A1 (ENSAMEG00000001767)	SLC19A1 (ENSAMEG00000001754) #13	PCBP3 (ENSAMEG00000001697) #14	COL6A1 (ENSAMEG00000001581) #15	COL6A2 (ENSAMEG00000001501) #16	FTCD (ENSAMEG00000001451) #17	SPATC1L (ENSAMEG00000001442) #19	LSS (ENSAMEG00000001378) #20	MCM3AP (ENSAMEG00000001319) #21	YBEY (ENSAMEG00000001317) #22	DIP2A (ENSAMEG00000001136) #25	S100B (ENSAMEG00000001133) #26	ENSAMEG00000031399 #27	ENSAMEG00000025036 ##25	ENSAMEG00000027833	ENSAMEG00000005298
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00950000182895.a.b.j #7	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
American mink	MODERN SPECIES	122	ITGB2 (ENSNVIG00000007863) #9	SLX9 (ENSNVIG00000008023) #10	ADARB1 (ENSNVIG00000008112) #11	ENSNVIG00000008191 #12	ENSNVIG00000008211 #12	ENSNVIG00000008220 #12	ENSNVIG00000008255	ENSNVIG00000008290	PCBP3 (ENSNVIG00000008330) #14	COL6A1 (ENSNVIG00000008572) #15	ENSNVIG00000008753 #16	FTCD (ENSNVIG00000008760) #17	SPATC1L (ENSNVIG00000008811) #19	LSS (ENSNVIG00000008849) #20	MCM3AP (ENSNVIG00000008876) #21	YBEY (ENSNVIG00000008998) #22	ENSNVIG00000009125	DIP2A (ENSNVIG00000009214) #25	S100B (ENSNVIG00000009347) #26	PRMT2 (ENSNVIG00000009362) #27
Atlantogenata	ANCESTRAL SPECIES	141				ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27	ENSGT00940000154486.b.a.a.b
Xenarthra	ANCESTRAL SPECIES	366										ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26	ENSGT00940000160683 #27
Armadillo	MODERN SPECIES	4624										ENSDNOG00000043275	COL6A2 (ENSDNOG00000038020) #16	FTCD (ENSDNOG00000046455) #17	SPATC1L (ENSDNOG00000039388) #19	LSS (ENSDNOG00000000135) #20	MCM3AP (ENSDNOG00000006842) #21	YBEY (ENSDNOG00000037393) #22	ENSDNOG00000044870 #23	PCNT (ENSDNOG00000024519)	ENSDNOG00000040085	ENSDNOG00000046721 #25	S100B (ENSDNOG00000045806) #26	ENSDNOG00000017401 #27
Sloth	MODERN SPECIES	6568																ENSCHOG00000006788 #22
Afrotheria	ANCESTRAL SPECIES	177				ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25
Tenrec	MODERN SPECIES	8796																YBEY (ENSETEG00000018449) #22	ENSETEG00000018451
Afrotheria_a	ANCESTRAL SPECIES	179				ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162185 #14	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25
Hyrax	MODERN SPECIES	4382														LSS (ENSPCAG00000007230) #20	MCM3AP (ENSPCAG00000007351) #21	YBEY (ENSPCAG00000007595) #22
Elephant	MODERN SPECIES	62				SLX9 (ENSLAFG00000010542) #10	ADARB1 (ENSLAFG00000007480) #11	POFUT2 (ENSLAFG00000011888) #12	COL18A1 (ENSLAFG00000017396)	SLC19A1 (ENSLAFG00000018599) #13	PCBP3 (ENSLAFG00000020835) #14	ENSLAFG00000010458	COL6A2 (ENSLAFG00000001954) #16	FTCD (ENSLAFG00000030714) #17	LSS (ENSLAFG00000003317) #20	ENSLAFG00000025926 #21	ENSLAFG00000003323 #21	YBEY (ENSLAFG00000031106) #22	ENSLAFG00000025881 #23	PCNT (ENSLAFG00000017965)	DIP2A (ENSLAFG00000017975) #25
Marsupialia	ANCESTRAL SPECIES	31	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27	ENSGT00940000161997.a #26	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00940000163820	ENSGT00940000163976	ENSGT00940000157267	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162185 #14	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27	ENSGT00940000161997.a #26	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00940000163820	ENSGT00940000163976	ENSGT00940000157267	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b
Diprotodontia	ANCESTRAL SPECIES	73	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27	ENSGT00940000161997.a #26	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b
Diprotodontia_a	ANCESTRAL SPECIES	70	ENSGT00390000004977 #8	ENSGT01090000259987.a.a.a #9	ENSGT00390000015709 #10	ENSGT00940000155992 #11	ENSGT00390000007989 #12	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322.h #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27	ENSGT00940000161997.a #26	ENSGT00390000009001	ENSGT00940000160270	ENSGT00940000159677.d	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000161996	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b
koala	MODERN SPECIES	242	UBE2G2 (ENSPCIG00000032087)	PTTG1IP (ENSPCIG00000024195) #8	ITGB2 (ENSPCIG00000024190) #9	ENSPCIG00000024188 #10	ADARB1 (ENSPCIG00000024187) #11	POFUT2 (ENSPCIG00000024184) #12	COL18A1 (ENSPCIG00000037322)	SLC19A1 (ENSPCIG00000007128) #13	ENSPCIG00000028092	COL6A1 (ENSPCIG00000019516) #15	COL6A2 (ENSPCIG00000015214) #16	FTCD (ENSPCIG00000015206) #17	SPATC1L (ENSPCIG00000015203) #19	LSS (ENSPCIG00000015192) #20	MCM3AP (ENSPCIG00000015184) #21	YBEY (ENSPCIG00000015181) #22	ENSPCIG00000008757 #23	DIP2A (ENSPCIG00000008739) #25	PRMT2 (ENSPCIG00000008734) #27	ENSPCIG00000008733 #26	ENSPCIG00000008732	TRPM8 (ENSPCIG00000009198)	ENSPCIG00000008418	ENSPCIG00000032509	NDUFA10 (ENSPCIG00000020762)	HDAC4 (ENSPCIG00000026377)	TWIST2 (ENSPCIG00000026380)
Common wonbat	MODERN SPECIES	754	PTTG1IP (ENSVURG00010024041) #8	ITGB2 (ENSVURG00010024043) #9	ENSVURG00010024045 #10	ADARB1 (ENSVURG00010024046) #11	ENSVURG00010024049 #12	ENSVURG00010024050 #12	ENSVURG00010024054	SLC19A1 (ENSVURG00010024057) #13	ENSVURG00010024058	ENSVURG00010024060	COL6A2 (ENSVURG00010024064) #16	FTCD (ENSVURG00010024070) #17	SPATC1L (ENSVURG00010024072) #19	LSS (ENSVURG00010024074) #20	MCM3AP (ENSVURG00010024078) #21	YBEY (ENSVURG00010024080) #22	ENSVURG00010024082 #23	ENSVURG00010024091	DIP2A (ENSVURG00010024120) #25	PRMT2 (ENSVURG00010024125) #27	S100B (ENSVURG00010024133) #26	ENSVURG00010024134	TRPM8 (ENSVURG00010024178)	ENSVURG00010024372
Wallaby	MODERN SPECIES	6489															MCM3AP (ENSMEUG00000004992) #21	ENSMEUG00000005044 #22
Opossum	MODERN SPECIES	1	ST6GAL1 (ENSMODG00000013313)	DNAJB11 (ENSMODG00000013307)	TBCCD1 (ENSMODG00000013298)	CRYGS (ENSMODG00000013295)	ENSMODG00000013291	DGKG (ENSMODG00000023132)	ETV5 (ENSMODG00000013273)	ENSMODG00000039909	ENSMODG00000036464	ENSMODG00000048684	TRA2B (ENSMODG00000013248)	ENSMODG00000037655 #17	SPATC1L (ENSMODG00000008502) #19	LSS (ENSMODG00000008489) #20	MCM3AP (ENSMODG00000008187) #21	YBEY (ENSMODG00000008458) #22	ENSMODG00000046878 #21	ENSMODG00000008392	DIP2A (ENSMODG00000008324) #25	ENSMODG00000008071	ENSMODG00000008038	ENSMODG00000041690	UGT1A6 (ENSMODG00000007963)	ENSMODG00000046309	ENSMODG00000007745	NDUFA10 (ENSMODG00000007705)	ENSMODG00000008969	RAB17 (ENSMODG00000043415)	LRRFIP1 (ENSMODG00000008928)	ENSMODG00000008910	ENSMODG00000041903
Platypus	MODERN SPECIES	18	PTTG1IP (ENSOANG00000050465) #8	ITGB2 (ENSOANG00000000415) #9	ENSOANG00000046464 #10	ADARB1 (ENSOANG00000012491) #11	POFUT2 (ENSOANG00000012784) #12	ENSOANG00000043147	ENSOANG00000000668 #13	ENSOANG00000006265	ENSOANG00000006264	COL6A2 (ENSOANG00000013567) #16	ENSOANG00000046435 #16	FTCD (ENSOANG00000013566) #17	ENSOANG00000000806 #19	LSS (ENSOANG00000013565) #20	MCM3AP (ENSOANG00000013563) #21	YBEY (ENSOANG00000038356) #22	ENSOANG00000028261 #21	ENSOANG00000013561 #23	ENSOANG00000020123	DIP2A (ENSOANG00000013554) #25	ENSOANG00000041326	PRMT2 (ENSOANG00000013551) #27	S100B (ENSOANG00000013550) #26	ENSOANG00000013548	NDUFA10 (ENSOANG00000002908)	HDAC4 (ENSOANG00000012951)	TWIST2 (ENSOANG00000012950)	ASB1 (ENSOANG00000044852)	ENSOANG00000049765	TRAF3IP1 (ENSOANG00000012754)	USP40 (ENSOANG00000012752)
Sauria	ANCESTRAL SPECIES	71			ENSGT00940000167200	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00950000183546	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000162889 #15	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000161997.a #26
Lepidosauria	ANCESTRAL SPECIES	111								ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000012063	ENSGT00390000003338	ENSGT00390000010170.a.b.x	ENSGT01050000244937.a.a	ENSGT00390000011864
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000003338	ENSGT00390000012063	ENSGT00390000010170.a.b.x	ENSGT01050000244937.a.a
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00940000162768.B	ENSGT00950000183546	ENSGT00940000181461	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000003338	ENSGT00390000012063	ENSGT00390000010170.a.b.x	ENSGT01050000244937.a.a
Common wall lizard	MODERN SPECIES		ASB18 (ENSPMRG00000001902)	IQCA1 (ENSPMRG00000001911)	ENSPMRG00000001932	COPS8 (ENSPMRG00000001949)	MLPH (ENSPMRG00000001979)	ENSPMRG00000002010	RAB17 (ENSPMRG00000002014)	ENSPMRG00000002029	ENSPMRG00000002049	ENSPMRG00000002055	COL6A2 (ENSPMRG00000002061) #16	FTCD (ENSPMRG00000002078) #17	SPATC1L (ENSPMRG00000002088) #19	LSS (ENSPMRG00000002104) #20	MCM3AP (ENSPMRG00000002152) #21	YBEY (ENSPMRG00000002313) #22	POFUT2 (ENSPMRG00000002339) #12	ADARB1 (ENSPMRG00000002397) #11	SLX9 (ENSPMRG00000002410) #10	ITGB2 (ENSPMRG00000002418) #9	KMO (ENSPMRG00000002431)	ENSPMRG00000002448	ENSPMRG00000002461	RCBTB2 (ENSPMRG00000002466)	RB1 (ENSPMRG00000002469)	LPAR6 (ENSPMRG00000002480)	ENSPMRG00000002484	ITM2B (ENSPMRG00000002490)	NUDT15 (ENSPMRG00000002501)	MED4 (ENSPMRG00000002508)	SUCLA2 (ENSPMRG00000002516)
Argentine black and white tegu	MODERN SPECIES	12	IQCA1 (ENSSMRG00000020961)	ACKR3 (ENSSMRG00000020962)	COPS8 (ENSSMRG00000020967)	COL6A3 (ENSSMRG00000020968)	MLPH (ENSSMRG00000020969)	PRLH (ENSSMRG00000020970)	RAB17 (ENSSMRG00000020971)	ENSSMRG00000020972	ENSSMRG00000020973	ENSSMRG00000020974	COL6A2 (ENSSMRG00000020975) #16	FTCD (ENSSMRG00000020977) #17	SPATC1L (ENSSMRG00000020978) #19	LSS (ENSSMRG00000020979) #20	MCM3AP (ENSSMRG00000020980) #21	YBEY (ENSSMRG00000020981) #22	POFUT2 (ENSSMRG00000020982) #12	ADARB1 (ENSSMRG00000020983) #11	SLX9 (ENSSMRG00000020984) #10	ITGB2 (ENSSMRG00000020985) #9	KMO (ENSSMRG00000021047)	ENSSMRG00000021055	ENSSMRG00000021064	RCBTB2 (ENSSMRG00000021065)	RB1 (ENSSMRG00000021067)	LPAR6 (ENSSMRG00000021069)	ITM2B (ENSSMRG00000021070)	NUDT15 (ENSSMRG00000021071)	MED4 (ENSSMRG00000021073)	SUCLA2 (ENSSMRG00000021075)	HTR2A (ENSSMRG00000021077)
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00950000183115.b.a	ENSGT00390000003338	ENSGT00390000012063	ENSGT00390000010170.a.b.x
Elapidae	ANCESTRAL SPECIES		ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00950000185272	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000161407	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT01050000244937.a.a	ENSGT00390000010170.a.b.x	ENSGT00390000012063	ENSGT00390000003338	ENSGT00950000183115.b.a	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00940000158925	ENSGT00940000155311.B	ENSGT00730000110871.a.a.a.b
Elapidae_a	ANCESTRAL SPECIES	39	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00950000185272	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000161407	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT01050000244937.a.a	ENSGT00390000010170.a.b.x	ENSGT00390000012063	ENSGT00390000003338	ENSGT00950000183115.b.a	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00940000158925	ENSGT00940000155311.B	ENSGT00730000110871.a.a.a.b
Acanthophiinae	ANCESTRAL SPECIES	39	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00950000185272	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00520000055666.b #19	ENSGT00390000011570.t #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000161407	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT01050000244937.a.a	ENSGT00390000010170.a.b.x	ENSGT00390000012063	ENSGT00390000003338	ENSGT00950000183115.b.a	ENSGT00950000183202.b	ENSGT01040000240444.A.a.a.a.a	ENSGT00940000158925	ENSGT00960000192136	ENSGT00730000110871.a.a.a.b
Mainland tiger snake	MODERN SPECIES	110	ENSNSUG00000012811	ACKR3 (ENSNSUG00000012812)	COPS8 (ENSNSUG00000012813)	ENSNSUG00000012830	ENSNSUG00000012831	MLPH (ENSNSUG00000012832)	PRLH (ENSNSUG00000012876)	ENSNSUG00000012877	ENSNSUG00000012878	ENSNSUG00000012881	COL6A2 (ENSNSUG00000012883) #16	FTCD (ENSNSUG00000012884) #17	ENSNSUG00000012885	LSS (ENSNSUG00000012886) #20	MCM3AP (ENSNSUG00000013011) #21	YBEY (ENSNSUG00000013065) #22	POFUT2 (ENSNSUG00000000048) #12	IRS2 (ENSNSUG00000000056)	TNFSF13B (ENSNSUG00000000328)	ABHD13 (ENSNSUG00000000406)	LIG4 (ENSNSUG00000000410)	HTR2A (ENSNSUG00000000412)	SUCLA2 (ENSNSUG00000000414)	MED4 (ENSNSUG00000000419)	NUDT15 (ENSNSUG00000000422)	ITM2B (ENSNSUG00000000425)	ENSNSUG00000000427	RB1 (ENSNSUG00000000430)	LPAR6 (ENSNSUG00000000434)	RCBTB2 (ENSNSUG00000000438)	ENSNSUG00000000441
Eastern brown snake	MODERN SPECIES	36	IQCA1 (ENSPTXG00000000336)	ACKR3 (ENSPTXG00000000332)	COPS8 (ENSPTXG00000000311)	COL6A3 (ENSPTXG00000000271)	ENSPTXG00000000246	ENSPTXG00000000237	ENSPTXG00000000211	ENSPTXG00000000194	ENSPTXG00000000142	ENSPTXG00000003775	COL6A2 (ENSPTXG00000003773) #16	FTCD (ENSPTXG00000003772) #17	SPATC1L (ENSPTXG00000003771) #19	LSS (ENSPTXG00000002713) #20	MCM3AP (ENSPTXG00000002655) #21	YBEY (ENSPTXG00000002648) #22	ENSPTXG00000002646 #12	ENSPTXG00000002645 #12	IRS2 (ENSPTXG00000002597)	TNFSF13B (ENSPTXG00000002577)	ABHD13 (ENSPTXG00000002576)	LIG4 (ENSPTXG00000002573)	HTR2A (ENSPTXG00000002570)	SUCLA2 (ENSPTXG00000002568)	MED4 (ENSPTXG00000002567)	NUDT15 (ENSPTXG00000002564)	ITM2B (ENSPTXG00000002561)	LPAR6 (ENSPTXG00000002559)	RB1 (ENSPTXG00000002482)	RCBTB2 (ENSPTXG00000002468)	ENSPTXG00000002466
Blue-lipped sea krait	MODERN SPECIES	7249																YBEY (ENSLLTG00000007573) #22	POFUT2 (ENSLLTG00000007542) #12	IRS2 (ENSLLTG00000007489)	TNFSF13B (ENSLLTG00000007402)	ABHD13 (ENSLLTG00000007378)	LIG4 (ENSLLTG00000007363)	HTR2A (ENSLLTG00000007302)	SUCLA2 (ENSLLTG00000004558)
Indian cobra	MODERN SPECIES		ENSNNAG00000013714	GBX2 (ENSNNAG00000013633)	IQCA1 (ENSNNAG00000013491)	ACKR3 (ENSNNAG00000013475)	COPS8 (ENSNNAG00000013456)	COL6A3 (ENSNNAG00000013218)	MLPH (ENSNNAG00000013124)	ENSNNAG00000013103	ENSNNAG00000013062	ENSNNAG00000012914	COL6A2 (ENSNNAG00000012890) #16	FTCD (ENSNNAG00000012835) #17	SPATC1L (ENSNNAG00000012819) #19	LSS (ENSNNAG00000010089) #20	MCM3AP (ENSNNAG00000009601) #21	YBEY (ENSNNAG00000009555) #22	POFUT2 (ENSNNAG00000009522) #12	IRS2 (ENSNNAG00000009481)	TNFSF13B (ENSNNAG00000009437)	ABHD13 (ENSNNAG00000009427)	LIG4 (ENSNNAG00000009416)	HTR2A (ENSNNAG00000009399)	SUCLA2 (ENSNNAG00000009363)	MED4 (ENSNNAG00000009342)	NUDT15 (ENSNNAG00000009329)	ITM2B (ENSNNAG00000009301)	LPAR6 (ENSNNAG00000009281)	RB1 (ENSNNAG00000009195)	RCBTB2 (ENSNNAG00000009162)	ENSNNAG00000009129	ENSNNAG00000008922
Lizard	MODERN SPECIES		LGALSL (ENSACAG00000001605)	COL6A3 (ENSACAG00000004231)	ENSACAG00000040968	MLPH (ENSACAG00000004551)	PRLH (ENSACAG00000020999)	RAB17 (ENSACAG00000004554)	ENSACAG00000004607	ENSACAG00000043473	ENSACAG00000036057	ENSACAG00000004735	COL6A2 (ENSACAG00000004843) #16	FTCD (ENSACAG00000004847) #17	SPATC1L (ENSACAG00000042410) #19	LSS (ENSACAG00000004914) #20	MCM3AP (ENSACAG00000004980) #21	YBEY (ENSACAG00000005066) #22	TRAM2 (ENSACAG00000005070)	EFHC1 (ENSACAG00000005118)	MCM3 (ENSACAG00000005146)	IL17F (ENSACAG00000005245)	TFAP2B (ENSACAG00000005251)	TFAP2D (ENSACAG00000005336)	ENSACAG00000005354	CRISP3 (ENSACAG00000005469)	FAM161A (ENSACAG00000005568)	CCT4 (ENSACAG00000005569)	ENSACAG00000034625	COMMD1 (ENSACAG00000005706)	B3GNT2 (ENSACAG00000005727)	ENSACAG00000040766	ENSACAG00000037410
tuatara	MODERN SPECIES	1378									ENSSPUG00000018689	COL6A2 (ENSSPUG00000018781) #16	FTCD (ENSSPUG00000018799) #17	SPATC1L (ENSSPUG00000018810) #19	LSS (ENSSPUG00000018817) #20	ENSSPUG00000018824	MCM3AP (ENSSPUG00000018832) #21	YBEY (ENSSPUG00000018844) #22	POFUT2 (ENSSPUG00000018852) #12
Archelosauria	ANCESTRAL SPECIES	57															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01030000235951	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005581.a #17	ENSGT00940000155682 #16	ENSGT00940000162889 #15	ENSGT01030000235116
Cryptodira	ANCESTRAL SPECIES	82															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263521.b	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005581.a #17	ENSGT00940000155682 #16	ENSGT00940000162889 #15	ENSGT01030000235116
Chinese turtle	MODERN SPECIES	312		CALB2 (ENSPSIG00000010519)	NAB1 (ENSPSIG00000011038)	NEMP2 (ENSPSIG00000011542)	MFSD6 (ENSPSIG00000012231)	HIBCH (ENSPSIG00000012329)	MSTN (ENSPSIG00000013093)	PMS1 (ENSPSIG00000013731)	ORMDL1 (ENSPSIG00000014497)	OSGEPL1 (ENSPSIG00000014541)	ANKAR (ENSPSIG00000014767)	ASNSD1 (ENSPSIG00000015372)	SLC40A1 (ENSPSIG00000015492)	WDR75 (ENSPSIG00000015923)	MCM3AP (ENSPSIG00000017417) #21	YBEY (ENSPSIG00000005816) #22	POFUT2 (ENSPSIG00000005856) #12	ADARB1 (ENSPSIG00000006201) #11	SLX9 (ENSPSIG00000007857) #10	ITGB2 (ENSPSIG00000007865) #9	KMO (ENSPSIG00000009281)	ENSPSIG00000009478	ENSPSIG00000009495	DIP2A (ENSPSIG00000009615) #25	ENSPSIG00000000672	S100B (ENSPSIG00000010916) #26	LSS (ENSPSIG00000010939) #20
Testudinoidea	ANCESTRAL SPECIES	57													ENSGT00390000014309	ENSGT00390000004367	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a.m	ENSGT01100000263521.b	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005581.a #17	ENSGT00940000155682 #16	ENSGT01030000235116
Emydidae	ANCESTRAL SPECIES	107														ENSGT00390000004367	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263521.b	ENSGT01100000263556.a.a.m	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005581.a #17
painted turtle	MODERN SPECIES	990														ENSCPBG00000004594	MCM3AP (ENSCPBG00000004543) #21	YBEY (ENSCPBG00000004508) #22	POFUT2 (ENSCPBG00000004224) #12	ADARB1 (ENSCPBG00000004191) #11	SLX9 (ENSCPBG00000004173) #10
Three-toed box turtle	MODERN SPECIES	176														ENSTMTG00000013431	MCM3AP (ENSTMTG00000013346) #21	YBEY (ENSTMTG00000013320) #22	POFUT2 (ENSTMTG00000013038) #12	ADARB1 (ENSTMTG00000012997) #11	SLX9 (ENSTMTG00000012983) #10	ITGB2 (ENSTMTG00000010872) #9	KMO (ENSTMTG00000010700)	ENSTMTG00000010677 #23	PCNT (ENSTMTG00000010421)	DIP2A (ENSTMTG00000010338) #25	ENSTMTG00000010326	S100B (ENSTMTG00000010309) #26	LSS (ENSTMTG00000009259) #20	FTCD (ENSTMTG00000009148) #17
Testudinidae	ANCESTRAL SPECIES	76													ENSGT00390000014309	ENSGT00390000004367	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a.m	ENSGT00940000154411.`b.h.a	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005581.a #17	ENSGT00940000155682 #16	ENSGT01030000235116	ENSGT00940000163601
Abingdon island giant tortoise	MODERN SPECIES	2277														MRPS16 (ENSCABG00000017186)	MCM3AP (ENSCABG00000017177) #21	YBEY (ENSCABG00000017174) #22	POFUT2 (ENSCABG00000017028) #12	ADARB1 (ENSCABG00000017006) #11	ENSCABG00000016999	ENSCABG00000016998
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005012861	ENSGEVG00005012842	ENSGEVG00005012632	ENSGEVG00005012175	ENSGEVG00005012120	ENSGEVG00005011995	ENSGEVG00005011891	ENSGEVG00005011848	ENSGEVG00005011826	ENSGEVG00005011780	ENSGEVG00005011747	ENSGEVG00005011620	ENSGEVG00005011505	ENSGEVG00005011461	MCM3AP (ENSGEVG00005011367) #21	YBEY (ENSGEVG00005011338) #22	POFUT2 (ENSGEVG00005011081) #12	ADARB1 (ENSGEVG00005011015) #11	ENSGEVG00005010964	SLX9 (ENSGEVG00005010943) #10	ITGB2 (ENSGEVG00005010898) #9	KMO (ENSGEVG00005010609)	PCNT (ENSGEVG00005009792)	DIP2A (ENSGEVG00005009109) #25	ENSGEVG00005008968	ENSGEVG00005008935	ENSGEVG00005008908	S100B (ENSGEVG00005008882) #26	ENSGEVG00005008427 #20	FTCD (ENSGEVG00005008182) #17	ENSGEVG00005007922 #20
Archosauria	ANCESTRAL SPECIES	61															ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01030000235951	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005581.a #17	ENSGT00940000155682 #16	ENSGT00940000162889 #15	ENSGT01030000235116
Aves	ANCESTRAL SPECIES	63							ENSGT00940000167200	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01030000235951	ENSGT00390000011570 #20
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a	ENSGT00940000161997.a #26	ENSGT00390000011570 #20
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a	ENSGT00940000161997.a #26	ENSGT00390000011570 #20
Anatidae	ANCESTRAL SPECIES	10	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a	ENSGT00940000161997.a #26	ENSGT00390000011570 #20	ENSGT00390000005159	ENSGT00940000156444	ENSGT00940000155861.C	ENSGT00940000159606
Pink-footed goose	MODERN SPECIES	545													ENSABRG00000015463	VMO1 (ENSABRG00000015465)	MCM3AP (ENSABRG00000015486) #21	ENSABRG00000015933 #22	POFUT2 (ENSABRG00000015936) #12
Phasianidae	ANCESTRAL SPECIES																	ENSGT00950000183170.b.b #22
Japanese quail	MODERN SPECIES	25	USP40 (ENSCJPG00005012796)	ENSCJPG00005012795	ASB1 (ENSCJPG00005012794)	ENSCJPG00005012792	TWIST2 (ENSCJPG00005012791)	HDAC4 (ENSCJPG00005012790)	NDUFA10 (ENSCJPG00005012787)	ENSCJPG00005012786	ENSCJPG00005012785	COL18A1 (ENSCJPG00005012784)	SLC19A1 (ENSCJPG00005012783) #13	ENSCJPG00005012781	ENSCJPG00005012780	COL6A2 (ENSCJPG00005012779) #16	FTCD (ENSCJPG00005012778) #17	YBEY (ENSCJPG00005012777) #22	MCM3AP (ENSCJPG00005012505) #21	POFUT2 (ENSCJPG00005012498) #12	ENSCJPG00005012497	LSS (ENSCJPG00005012495) #20	S100B (ENSCJPG00005012494) #26	DIP2A (ENSCJPG00005011865) #25	PCNT (ENSCJPG00005011847)	C21orf58 (ENSCJPG00005011846) #23	KMO (ENSCJPG00005011818)	ITGB2 (ENSCJPG00005010917) #9	ENSCJPG00005010916 #10	ADARB1 (ENSCJPG00005010914) #11	GLS (ENSCJPG00005009421)	STAT1 (ENSCJPG00005009401)	STAT4 (ENSCJPG00005008601)
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a	ENSGT00940000161997.a #26	ENSGT00390000011570 #20
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000155992 #11	ENSGT00390000015709 #10	ENSGT01090000259987.a.a.a #9	ENSGT00390000000747	ENSGT00390000011514 #23	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT01100000263556.a.a	ENSGT00940000161997.a #26	ENSGT00390000011570 #20
Kakapo	MODERN SPECIES	22	ENSSHBG00005021194	COL6A2 (ENSSHBG00005021193) #16	ENSSHBG00005021192	ERBB4 (ENSSHBG00005021191)	CPS1 (ENSSHBG00005021188)	LANCL1 (ENSSHBG00005021187)	MYL1 (ENSSHBG00005021186)	ACADL (ENSSHBG00005021185)	KANSL1L (ENSSHBG00005021184)	ENSSHBG00005021183	UNC80 (ENSSHBG00005021181)	MAP2 (ENSSHBG00005021179)	FTCD (ENSSHBG00005021178) #17	ENSSHBG00005021177	MCM3AP (ENSSHBG00005021176) #21	YBEY (ENSSHBG00005021175) #22	POFUT2 (ENSSHBG00005021174) #12	ENSSHBG00005021173 #11	ENSSHBG00005021172 #11	SLX9 (ENSSHBG00005021171) #10	ITGB2 (ENSSHBG00005021170) #9	KMO (ENSSHBG00005021169)	DIP2A (ENSSHBG00005020890) #25	ENSSHBG00005020403	ENSSHBG00005020388	S100B (ENSSHBG00005020371) #26	LSS (ENSSHBG00005020363) #20	ENSSHBG00005020357	CWF19L1 (ENSSHBG00005020349)	CHUK (ENSSHBG00005020303)	ERLIN1 (ENSSHBG00005020279)
Golden eagle	MODERN SPECIES	22	ASB1 (ENSACCG00020012311)	TWIST2 (ENSACCG00020012284)	HDAC4 (ENSACCG00020012255)	NDUFA10 (ENSACCG00020012200)	ENSACCG00020012153	ENSACCG00020012065	COL18A1 (ENSACCG00020011973)	SLC19A1 (ENSACCG00020011933) #13	ENSACCG00020011897	ENSACCG00020011863	COL6A2 (ENSACCG00020011711) #16	FTCD (ENSACCG00020011658) #17	ENSACCG00020011632	ENSACCG00020011567	MCM3AP (ENSACCG00020011305) #21	YBEY (ENSACCG00020011066) #22	POFUT2 (ENSACCG00020011041) #12	ADARB1 (ENSACCG00020010987) #11	SLX9 (ENSACCG00020010969) #10	ITGB2 (ENSACCG00020010936) #9	KMO (ENSACCG00020010917)	C21orf58 (ENSACCG00020010903) #23	PCNT (ENSACCG00020010826)	DIP2A (ENSACCG00020010702) #25	ENSACCG00020010675	S100B (ENSACCG00020010663) #26	LSS (ENSACCG00020010640) #20	ENSACCG00020010625	ENSACCG00020010612	LACTBL1 (ENSACCG00020010600)	EPHB2 (ENSACCG00020010571)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000160270.s.b	ENSGT00940000154793.C.ab	ENSGT00960000192637	ENSGT00940000154365.a.b	ENSGT00940000162056	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b.b	ENSGT00940000154486.b.a.a.b.a	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000160270.s.b	ENSGT00940000154793.C.ab	ENSGT00960000192637	ENSGT00940000154365.a.b	ENSGT00940000162056	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b.b	ENSGT00940000154486.b.a.a.b.a	ENSGT00940000154486.b.b	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT01030000234722.a.a.b.b	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000007989 #12	ENSGT00940000160270.s.a	ENSGT00940000154793.C.ab	ENSGT00960000192637	ENSGT00940000154365.a.b	ENSGT00940000154067.c	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452
Zebra finch	MODERN SPECIES	29	ENSTGUG00000021876	TWIST2 (ENSTGUG00000025055)	HDAC4 (ENSTGUG00000003197)	ENSTGUG00000024424	NDUFA10 (ENSTGUG00000003244)	ENSTGUG00000027043	ENSTGUG00000003263	COL18A1 (ENSTGUG00000003295)	SLC19A1 (ENSTGUG00000016708) #13	ENSTGUG00000003316	ENSTGUG00000003341	COL6A2 (ENSTGUG00000003386) #16	FTCD (ENSTGUG00000003422) #17	ENSTGUG00000003453	MCM3AP (ENSTGUG00000003458) #21	YBEY (ENSTGUG00000003495) #22	POFUT2 (ENSTGUG00000003497) #12	ENSTGUG00000019313	TRPM8 (ENSTGUG00000003521)	AGAP1 (ENSTGUG00000003583)	ENSTGUG00000029585	GBX2 (ENSTGUG00000003625)	ACKR3 (ENSTGUG00000003645)	COPS8 (ENSTGUG00000003647)	ENSTGUG00000024557	COL6A3 (ENSTGUG00000003667)	MLPH (ENSTGUG00000003766)	PRLH (ENSTGUG00000020810)	RAB17 (ENSTGUG00000003786)	ENSTGUG00000003797	ENSTGUG00000021528
Common canary	MODERN SPECIES	8	USP40 (ENSSCAG00000009414)	TRAF3IP1 (ENSSCAG00000009407)	ASB1 (ENSSCAG00000009401)	TWIST2 (ENSSCAG00000009396)	HDAC4 (ENSSCAG00000009386)	NDUFA10 (ENSSCAG00000009359)	ENSSCAG00000009324	ENSSCAG00000009313	ENSSCAG00000009304	SLC19A1 (ENSSCAG00000009294) #13	ENSSCAG00000009284	ENSSCAG00000009257	ENSSCAG00000009229 #16	ENSSCAG00000009223 #17	ENSSCAG00000009219	YBEY (ENSSCAG00000009216) #22	MCM3AP (ENSSCAG00000009107) #21	POFUT2 (ENSSCAG00000009071) #12	TRPM8 (ENSSCAG00000009044)	AGAP1 (ENSSCAG00000009030)	GBX2 (ENSSCAG00000009011)	IQCA1 (ENSSCAG00000008997)	ACKR3 (ENSSCAG00000008987)	COPS8 (ENSSCAG00000008963)	COL6A3 (ENSSCAG00000008871)	MLPH (ENSSCAG00000008835)	PRLH (ENSSCAG00000008829)	RAB17 (ENSSCAG00000008822)	ENSSCAG00000008808	ENSSCAG00000008802	RAMP1 (ENSSCAG00000008799)
Flycatcher	MODERN SPECIES	26	TWIST2 (ENSFALG00000014990)	HDAC4 (ENSFALG00000003839)	ENSFALG00000025269	NDUFA10 (ENSFALG00000003854)	ENSFALG00000003870	ENSFALG00000028595	ENSFALG00000024703	COL18A1 (ENSFALG00000003898)	SLC19A1 (ENSFALG00000003945) #13	ENSFALG00000003949	ENSFALG00000024674	COL6A2 (ENSFALG00000003991) #16	FTCD (ENSFALG00000004013) #17	ENSFALG00000015028	MCM3AP (ENSFALG00000004024) #21	YBEY (ENSFALG00000004049) #22	ENSFALG00000027325 #12
Great tit	MODERN SPECIES	27	ASB1 (ENSPMJG00000006219)	ENSPMJG00000006222	TWIST2 (ENSPMJG00000006223)	HDAC4 (ENSPMJG00000006236)	NDUFA10 (ENSPMJG00000006274)	ENSPMJG00000006291	ENSPMJG00000006297	COL18A1 (ENSPMJG00000006305)	SLC19A1 (ENSPMJG00000006343) #13	PCBP3 (ENSPMJG00000006345) #14	ENSPMJG00000006352	COL6A2 (ENSPMJG00000006389) #16	FTCD (ENSPMJG00000006430) #17	ENSPMJG00000006435	MCM3AP (ENSPMJG00000006438) #21	YBEY (ENSPMJG00000006440) #22	ENSPMJG00000006441 #12	ENSPMJG00000006442	UGT1A1 (ENSPMJG00000006443)	SH3BP4 (ENSPMJG00000006446)	ARL4C (ENSPMJG00000006522)	SPP2 (ENSPMJG00000006527)	ENSPMJG00000006532	TRPM8 (ENSPMJG00000006537)	AGAP1 (ENSPMJG00000006600)	ENSPMJG00000006646	GBX2 (ENSPMJG00000006648)	ASB18 (ENSPMJG00000006649)	ENSPMJG00000006652	ACKR3 (ENSPMJG00000006683)	COPS8 (ENSPMJG00000006686)
Australian saltwater crocodile	MODERN SPECIES	66	ENSCPRG00005005704	AGAP1 (ENSCPRG00005005814)	GBX2 (ENSCPRG00005005853)	ASB18 (ENSCPRG00005005897)	IQCA1 (ENSCPRG00005005928)	ACKR3 (ENSCPRG00005005948)	ENSCPRG00005005949	COPS8 (ENSCPRG00005005990)	COL6A3 (ENSCPRG00005006067)	MLPH (ENSCPRG00005006256)	PRLH (ENSCPRG00005006285)	RAB17 (ENSCPRG00005006290)	LRRFIP1 (ENSCPRG00005006318)	ENSCPRG00005006347	MCM3AP (ENSCPRG00005006390) #21	YBEY (ENSCPRG00005006741) #22	POFUT2 (ENSCPRG00005006796) #12	ADARB1 (ENSCPRG00005007061) #11	SLX9 (ENSCPRG00005007076) #10	ITGB2 (ENSCPRG00005007177) #9	KMO (ENSCPRG00005007817)	PCNT (ENSCPRG00005007860)	DIP2A (ENSCPRG00005008003) #25	ENSCPRG00005008040	ENSCPRG00005008054	S100B (ENSCPRG00005008057) #26	LSS (ENSCPRG00005008065) #20	FTCD (ENSCPRG00005008102) #17	COL6A2 (ENSCPRG00005008124) #16	ENSCPRG00005008137	ENSCPRG00005008155
Anura	ANCESTRAL SPECIES	7	ENSGT00940000157043	ENSGT00940000155558	ENSGT00940000160494	ENSGT00390000016619.a	ENSGT00940000156472	ENSGT00390000005923	ENSGT00940000160909	ENSGT00940000158212.B	ENSGT00950000183022.b #13	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT00940000155682 #16	ENSGT00390000005581.a #17	ENSGT00390000011570 #20	ENSGT00940000156322 #21	ENSGT00950000183170.b.b #22	ENSGT00390000011514 #23	ENSGT00960000191699 #24	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a #25	ENSGT00940000160683 #27	ENSGT00390000016151	ENSGT00940000157440	ENSGT00940000165503	ENSGT00940000153969.b	ENSGT00720000108822	ENSGT00530000063273.b.b	ENSGT00940000159677.c.a	ENSGT00940000159677.c.b.a.f	ENSGT00940000159677.c.b.a.e.a	ENSGT00390000013151.a.a
Frog	MODERN SPECIES	9	pde1a (ENSXETG00000030679)	dnajc10 (ENSXETG00000025050)	frzb (ENSXETG00000001339)	nckap1 (ENSXETG00000001337)	dusp19 (ENSXETG00000001336)	nup35 (ENSXETG00000001335)	znf804a (ENSXETG00000039111)	col18a1 (ENSXETG00000011481)	slc19a1 (ENSXETG00000011482) #13	pcbp1 (ENSXETG00000011483)	col6a2 (ENSXETG00000011490) #16	ftcd (ENSXETG00000011494) #17	ENSXETG00000045954	ENSXETG00000035341	mcm3ap (ENSXETG00000011496) #21	ybey (ENSXETG00000035034) #22	tmem65 (ENSXETG00000011506) #23	ENSXETG00000043010 #24	pcnt (ENSXETG00000033996)	lss (ENSXETG00000004899) #20	dip2a (ENSXETG00000030597) #25	prmt2 (ENSXETG00000031494) #27	ugt1a1 (ENSXETG00000030758)	ENSXETG00000036379	ndufa10 (ENSXETG00000004886)	ENSXETG00000044440	hdac4 (ENSXETG00000004880)	ENSXETG00000035899	asb1 (ENSXETG00000004879)	ag1 (ENSXETG00000004878)	ENSXETG00000044141
Leishan spiny toad	MODERN SPECIES	10	INO80D (ENSLLEG00000026673)	ENSLLEG00000026634	ENSLLEG00000026571	ENSLLEG00000026550	ENSLLEG00000026502	ENSLLEG00000026468	SLC19A1 (ENSLLEG00000026312) #13	ENSLLEG00000026251	ENSLLEG00000024478	COL6A2 (ENSLLEG00000023804) #16	PPIL1 (ENSLLEG00000023656)	ENSLLEG00000023607	FTCD (ENSLLEG00000023256) #17	LSS (ENSLLEG00000021758) #20	MCM3AP (ENSLLEG00000020937) #21	YBEY (ENSLLEG00000020697) #22	C21orf58 (ENSLLEG00000020591) #23	ENSLLEG00000020568 #24	ENSLLEG00000019716	DIP2A (ENSLLEG00000019176) #25	PRMT2 (ENSLLEG00000019029) #27	ENSLLEG00000018991	NDUFA10 (ENSLLEG00000016937)	HDAC4 (ENSLLEG00000016167)	ENSLLEG00000016118	ENSLLEG00000016097	ASB1 (ENSLLEG00000016008)	TRAF3IP1 (ENSLLEG00000015779)	ENSLLEG00000019265	ENSLLEG00000019208	ENSLLEG00000019128