Sarcopterygii	ANCESTRAL SPECIES	1138																ENSGT01100000263563.c.a #22	ENSGT00990000210921
Tetrapoda	ANCESTRAL SPECIES	188								ENSGT00940000155116.a	ENSGT00980000198666	ENSGT00940000174587	ENSGT00950000183040.A.a #28	ENSGT00940000158173 #27	ENSGT00940000164246.C	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00990000210921	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25
Amniota	ANCESTRAL SPECIES	60	ENSGT00950000183078.b.a.a	ENSGT00390000013075.a	ENSGT00940000169757	ENSGT00940000160721	ENSGT00550000074799	ENSGT01060000250461	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00990000210921	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33
Mammalia	ANCESTRAL SPECIES	99					ENSGT01100000263554.C.e.a	ENSGT01100000263522.A.c.b.c.b	ENSGT01100000263522.A.d	ENSGT01100000263528.D ##18	ENSGT01090000260056.a.a.a.a.a.a	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550	ENSGT00940000155116.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35
Theria	ANCESTRAL SPECIES	52	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Eutheria	ANCESTRAL SPECIES	3	ENSGT01090000260056.a.a.a.a.a.b.b	ENSGT01090000260056.a.a.a.a.a.a.a.a	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000162005
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000155550.a.a.a	ENSGT00940000155550.b	ENSGT00940000155550.a.b	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000155550.a.a.a.b.a	ENSGT00940000155550.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.a	ENSGT00940000155550.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Carnivora	ANCESTRAL SPECIES	7	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Felidae	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.b	ENSGT00940000162834.a.d	ENSGT00940000155550.a.a.a.a.a.g	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.a.b.a	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956.a #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000155550.a.a.a.a.a.g.a	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.a.b.a	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a.fb	ENSGT01100000263522.A.d.a.a.mb.b	ENSGT01090000260013.b.a.a.a.a.gb	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a.nb	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956.a #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Panthera_a	ANCESTRAL SPECIES	20											ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956.a #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
leopard	MODERN SPECIES	29												OR52W1 (ENSPPRG00000015680) #18	C11orf42 (ENSPPRG00000012343) #19	FHIP1B (ENSPPRG00000011947) #20	CNGA4 (ENSPPRG00000011341) #21	CCKBR (ENSPPRG00000010661) #22	CAVIN3 (ENSPPRG00000009905) #23	SMPD1 (ENSPPRG00000009783) #24	APBB1 (ENSPPRG00000009133) #25	HPX (ENSPPRG00000012100) #26	TRIM3 (ENSPPRG00000011297) #27	ARFIP2 (ENSPPRG00000009679) #28	TIMM10B (ENSPPRG00000005816) #29	RRP8 (ENSPPRG00000022654) #30	ENSPPRG00000023135 #31	TAF10 (ENSPPRG00000024517) #32	TPP1 (ENSPPRG00000024708) #33	DCHS1 (ENSPPRG00000024944) #34	MRPL17 (ENSPPRG00000022075) #35	ENSPPRG00000021858 #36	ENSPPRG00000021625 #37
lion	MODERN SPECIES	10	TRIM21 (ENSPLOG00000004998)	ENSPLOG00000005015	ENSPLOG00000005026 ##18	ENSPLOG00000005036	ENSPLOG00000005041	OR52M1 (ENSPLOG00000005048)	ENSPLOG00000005058 ##18	TRIM68 (ENSPLOG00000005070)	OR51D1 (ENSPLOG00000005082)	OR51E1 (ENSPLOG00000005093)	OR52B2 (ENSPLOG00000005100)	OR52W1 (ENSPLOG00000005111) #18	C11orf42 (ENSPLOG00000005122) #19	FHIP1B (ENSPLOG00000005135) #20	CNGA4 (ENSPLOG00000005154) #21	CCKBR (ENSPLOG00000005180) #22	CAVIN3 (ENSPLOG00000005195) #23	SMPD1 (ENSPLOG00000005204) #24	APBB1 (ENSPLOG00000005250) #25	HPX (ENSPLOG00000005320) #26	TRIM3 (ENSPLOG00000005340) #27	ARFIP2 (ENSPLOG00000005392) #28	TIMM10B (ENSPLOG00000005443) #29	ENSPLOG00000005458	ENSPLOG00000005475	RRP8 (ENSPLOG00000005516) #30	ILK (ENSPLOG00000005569) #31	TAF10 (ENSPLOG00000005607) #32	TPP1 (ENSPLOG00000005678) #33	DCHS1 (ENSPLOG00000005833) #34	MRPL17 (ENSPLOG00000005883) #35
Tiger	MODERN SPECIES	181	ENSPTIG00000015681	ENSPTIG00000010409	ENSPTIG00000010419	ENSPTIG00000010427	ENSPTIG00000010432	OR56A4 (ENSPTIG00000010444)	OR56A1 (ENSPTIG00000016321)	ENSPTIG00000010483	ENSPTIG00000010491	ENSPTIG00000010504	ENSPTIG00000010508 ##18	OR56B4 (ENSPTIG00000016548)	C11orf42 (ENSPTIG00000016741) #19	FHIP1B (ENSPTIG00000016853) #20	CNGA4 (ENSPTIG00000016994) #21	CCKBR (ENSPTIG00000017427) #22	ENSPTIG00000017623 #23	SMPD1 (ENSPTIG00000017641) #24	APBB1 (ENSPTIG00000017985) #25	HPX (ENSPTIG00000001773) #26	TRIM3 (ENSPTIG00000004799) #27	ARFIP2 (ENSPTIG00000006571) #28	TIMM10B (ENSPTIG00000008373) #29	RRP8 (ENSPTIG00000011321) #30	ILK (ENSPTIG00000012693) #31	TAF10 (ENSPTIG00000013604) #32	TPP1 (ENSPTIG00000013760) #33	DCHS1 (ENSPTIG00000014056) #34	MRPL17 (ENSPTIG00000014738) #35	ENSPTIG00000000970 #37	ENSPTIG00000000981
Cat	MODERN SPECIES	241	OR52E5 (ENSFCAG00000046289)	ENSFCAG00000042727	ENSFCAG00000047749	ENSFCAG00000048797	ENSFCAG00000046369	ENSFCAG00000052758	ENSFCAG00000041362	OR56B4 (ENSFCAG00000007878)	ENSFCAG00000044555	ENSFCAG00000030539	ENSFCAG00000044362	OR52W1 (ENSFCAG00000004625) #18	FHIP1B (ENSFCAG00000004626) #20	CD1H11orf42 (ENSFCAG00000023147) #19	CNGA4 (ENSFCAG00000023578) #21	CCKBR (ENSFCAG00000011695) #22	CAVIN3 (ENSFCAG00000033677) #23	APBB1 (ENSFCAG00000004628) #25	SMPD1 (ENSFCAG00000027196) #24	TRIM3 (ENSFCAG00000004634) #27	ARFIP2 (ENSFCAG00000004631) #28	TIMM10B (ENSFCAG00000004633) #29	DNHD1 (ENSFCAG00000024710)	RRP8 (ENSFCAG00000015384) #30	ILK (ENSFCAG00000015388) #31	ENSFCAG00000015390 #32	TPP1 (ENSFCAG00000015392) #33	MRPL17 (ENSFCAG00000036047) #35	ENSFCAG00000030203 #36	ENSFCAG00000022056 #37	ENSFCAG00000035461
Caniformia	ANCESTRAL SPECIES	25											ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
Canidae	ANCESTRAL SPECIES	17	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT00940000161235.e	ENSGT00940000155550.a.a.a.a.a.b.a	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.a.a.a	ENSGT00940000155550.a.a.a.a.b.a	ENSGT01090000260013.b.a.a.a.a.db	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000157524.b
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT01090000260056.a.a.a.a.b	ENSGT00940000161235.e	ENSGT00940000155550.a.a.a.a.a.b.a	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.a.a.a	ENSGT00940000155550.a.a.a.a.b.a	ENSGT01100000263522.A.d.a.a.z	ENSGT01090000260013.b.a.a.a.a.db	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a.`b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183030.m.a.a.b.b.a.b.a.a	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35
Dog	MODERN SPECIES	13	ENSCAFG00845006422	OR56A3D (ENSCAFG00845006454)	ENSCAFG00845006594	ENSCAFG00845006627	OR56A1 (ENSCAFG00845006647)	OR56A1B (ENSCAFG00845006673)	OR52L2 (ENSCAFG00845006690)	OR52L1 (ENSCAFG00845006714)	cOR52X2 (ENSCAFG00845006734) ##18	OR56B6 (ENSCAFG00845006785)	OR52B2 (ENSCAFG00845006808)	FAM160A2 (ENSCAFG00845006888) #20	OR52W1 (ENSCAFG00845007024) #18	C21H11orf42 (ENSCAFG00845007051) #19	CNGA4 (ENSCAFG00845007124) #21	CCKBR (ENSCAFG00845007238) #22	CAVIN3 (ENSCAFG00845007318) #23	ENSCAFG00845007351	SMPD1 (ENSCAFG00845007383) #24	APBB1 (ENSCAFG00845007672) #25	TRIM3 (ENSCAFG00845008173) #27	ARFIP2 (ENSCAFG00845008330) #28	TIMM10B (ENSCAFG00845008439) #29	ENSCAFG00845008482	RRP8 (ENSCAFG00845008601) #30	ILK (ENSCAFG00845008689) #31	TAF10 (ENSCAFG00845008778) #32	TPP1 (ENSCAFG00845008889) #33	ENSCAFG00845009119 #34	ENSCAFG00845009270	OR2D37 (ENSCAFG00845009291) #37
Dingo	MODERN SPECIES	231	ENSCAFG00020009456	ENSCAFG00020009458	ENSCAFG00020009459	OR56A5 (ENSCAFG00020009463)	ENSCAFG00020009465	OR56A1 (ENSCAFG00020009469)	ENSCAFG00020009481	ENSCAFG00020009483	ENSCAFG00020009485 ##18	ENSCAFG00020009489	OR52B2 (ENSCAFG00020009491)	OR52W1 (ENSCAFG00020009494) #18	C11orf42 (ENSCAFG00020009498) #19	FHIP1B (ENSCAFG00020009500) #20	CNGA4 (ENSCAFG00020009508) #21	CCKBR (ENSCAFG00020009516) #22	CAVIN3 (ENSCAFG00020009550) #23	ENSCAFG00020009554	SMPD1 (ENSCAFG00020009556) #24	APBB1 (ENSCAFG00020009563) #25	HPX (ENSCAFG00020009575) #26	ENSCAFG00020009593	TRIM3 (ENSCAFG00020009595) #27	ARFIP2 (ENSCAFG00020009602) #28	TIMM10B (ENSCAFG00020009614) #29	DNHD1 (ENSCAFG00020009620)	RRP8 (ENSCAFG00020009685) #30	ILK (ENSCAFG00020009689) #31	TAF10 (ENSCAFG00020009695) #32	TPP1 (ENSCAFG00020009702) #33	DCHS1 (ENSCAFG00020009712) #34
Red fox	MODERN SPECIES	243	ENSVVUG00000024427	ENSVVUG00000024424	OR56A5 (ENSVVUG00000024421)	ENSVVUG00000024418	OR56A1 (ENSVVUG00000024416)	ENSVVUG00000024414	ENSVVUG00000024410	ENSVVUG00000024406	ENSVVUG00000024405 ##18	ENSVVUG00000024402	OR52B2 (ENSVVUG00000024400)	OR52W1 (ENSVVUG00000024398) #18	C11orf42 (ENSVVUG00000024396) #19	FAM160A2 (ENSVVUG00000024385) #20	CNGA4 (ENSVVUG00000024383) #21	CCKBR (ENSVVUG00000024380) #22	CAVIN3 (ENSVVUG00000024379) #23	SMPD1 (ENSVVUG00000024377) #24	APBB1 (ENSVVUG00000024371) #25	ENSVVUG00000024367	HPX (ENSVVUG00000024365) #26	TRIM3 (ENSVVUG00000024360) #27	ARFIP2 (ENSVVUG00000024358) #28	TIMM10B (ENSVVUG00000024356) #29	RRP8 (ENSVVUG00000024346) #30	ILK (ENSVVUG00000024160) #31	TAF10 (ENSVVUG00000024154) #32	DCHS1 (ENSVVUG00000024107) #34	MRPL17 (ENSVVUG00000024084) #35	ENSVVUG00000024082	ENSVVUG00000024079
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000155550.a.a.b	ENSGT00940000162834.a	ENSGT01090000260056.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
Ursidae	ANCESTRAL SPECIES	42	ENSGT00940000162834.b	ENSGT00940000155550.a.a.a.a.a	ENSGT00940000155550.b.c	ENSGT00940000155550.a.a.a.a.b.a	ENSGT00940000155550.a.a.b	ENSGT00940000162834.a	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
Ursus	ANCESTRAL SPECIES	138	ENSGT00940000155550.b.c	ENSGT00940000155550.a.a.a.a.b.a	ENSGT00940000155550.a.a.b	ENSGT00940000162834.a.b	ENSGT00940000162834.b	ENSGT00940000162834.a.a	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
American black bear	MODERN SPECIES	1859											OR52B2 (ENSUAMG00000023998)	OR52W1 (ENSUAMG00000023999) #18	C11orf42 (ENSUAMG00000024000) #19	FHIP1B (ENSUAMG00000024001) #20	CNGA4 (ENSUAMG00000024010) #21	CCKBR (ENSUAMG00000024011) #22	CAVIN3 (ENSUAMG00000024012) #23	SMPD1 (ENSUAMG00000024013) #24
Polar bear	MODERN SPECIES	444		ENSUMAG00000001603	ENSUMAG00000001598	ENSUMAG00000001591	ENSUMAG00000001582	OR56A5 (ENSUMAG00000001561)	ENSUMAG00000001549 ##18	OR56B4 (ENSUMAG00000001546)	ENSUMAG00000001538	ENSUMAG00000001529	OR52B2 (ENSUMAG00000001522)	OR52W1 (ENSUMAG00000001520) #18	C11orf42 (ENSUMAG00000001508) #19	FHIP1B (ENSUMAG00000001115) #20	CNGA4 (ENSUMAG00000001067) #21	CCKBR (ENSUMAG00000001035) #22	CAVIN3 (ENSUMAG00000001029) #23	SMPD1 (ENSUMAG00000000864) #24	APBB1 (ENSUMAG00000000852) #25	HPX (ENSUMAG00000000841) #26	TRIM3 (ENSUMAG00000000831) #27	ARFIP2 (ENSUMAG00000000812) #28	TIMM10B (ENSUMAG00000000775) #29	RRP8 (ENSUMAG00000000528) #30	ILK (ENSUMAG00000000525) #31	TPP1 (ENSUMAG00000000517) #33	DCHS1 (ENSUMAG00000000426) #34	MRPL17 (ENSUMAG00000000411) #35	ENSUMAG00000000406 #37	ENSUMAG00000000394	ENSUMAG00000000375 ##37
Giant Panda	MODERN SPECIES	18	ENSAMEG00000025557	ENSAMEG00000029959	ENSAMEG00000023818	ENSAMEG00000025770	OR56A5 (ENSAMEG00000030779)	ENSAMEG00000027783	ENSAMEG00000024668 ##18	OR56B4 (ENSAMEG00000026353)	ENSAMEG00000028585	ENSAMEG00000030989	OR52B2 (ENSAMEG00000020198)	OR52W1 (ENSAMEG00000020197) #18	C11orf42 (ENSAMEG00000016484) #19	FHIP1B (ENSAMEG00000016462) #20	CNGA4 (ENSAMEG00000016441) #21	CCKBR (ENSAMEG00000016432) #22	CAVIN3 (ENSAMEG00000016430) #23	SMPD1 (ENSAMEG00000016422) #24	APBB1 (ENSAMEG00000016393) #25	HPX (ENSAMEG00000016372) #26	TRIM3 (ENSAMEG00000016339) #27	ARFIP2 (ENSAMEG00000016326) #28	TIMM10B (ENSAMEG00000016325) #29	ENSAMEG00000027452	ENSAMEG00000030496	RRP8 (ENSAMEG00000016307) #30	ILK (ENSAMEG00000016283) #31	TAF10 (ENSAMEG00000016278) #32	TPP1 (ENSAMEG00000016259) #33	DCHS1 (ENSAMEG00000016249) #34	MRPL17 (ENSAMEG00000016246) #35
Mustelinae	ANCESTRAL SPECIES	78	ENSGT00940000162834.a	ENSGT00940000155550.a.a.a.a.a	ENSGT00940000155550.b.c	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35
American mink	MODERN SPECIES	474	ENSNVIG00000001281	OR56A5 (ENSNVIG00000001289)	OR56A4 (ENSNVIG00000001291)	OR56A1 (ENSNVIG00000001306)	ENSNVIG00000001318	ENSNVIG00000001322	ENSNVIG00000001328	ENSNVIG00000001337 ##18	ENSNVIG00000001339	ENSNVIG00000001347	OR52B2 (ENSNVIG00000001355)	OR52W1 (ENSNVIG00000001360) #18	C11orf42 (ENSNVIG00000001361) #19	FHIP1B (ENSNVIG00000001374) #20	CNGA4 (ENSNVIG00000001397) #21	ENSNVIG00000001412 #22	ENSNVIG00000001422	CAVIN3 (ENSNVIG00000001431) #23	SMPD1 (ENSNVIG00000001436) #24	APBB1 (ENSNVIG00000001468) #25	HPX (ENSNVIG00000001813) #26	TRIM3 (ENSNVIG00000001844) #27	ARFIP2 (ENSNVIG00000001865) #28	TIMM10B (ENSNVIG00000001911) #29	DNHD1 (ENSNVIG00000001925)	RRP8 (ENSNVIG00000002047) #30	ILK (ENSNVIG00000002078) #31	TAF10 (ENSNVIG00000002112) #32	TPP1 (ENSNVIG00000002138) #33	DCHS1 (ENSNVIG00000002240) #34	MRPL17 (ENSNVIG00000002293) #35
Ferret	MODERN SPECIES	539								ENSMPUG00000018919	ENSMPUG00000018912	ENSMPUG00000005834	OR52B2 (ENSMPUG00000018906)	OR52W1 (ENSMPUG00000018899) #18	C11orf42 (ENSMPUG00000005830) #19	FHIP1B (ENSMPUG00000005820) #20	CNGA4 (ENSMPUG00000005790) #21	CCKBR (ENSMPUG00000005743) #22	CAVIN3 (ENSMPUG00000005738) #23	SMPD1 (ENSMPUG00000005732) #24	APBB1 (ENSMPUG00000005723) #25	HPX (ENSMPUG00000005717) #26	TRIM3 (ENSMPUG00000005622) #27	ARFIP2 (ENSMPUG00000005613) #28	TIMM10B (ENSMPUG00000005598) #29	DNHD1 (ENSMPUG00000005555)	RRP8 (ENSMPUG00000005510) #30	ILK (ENSMPUG00000005495) #31	TPP1 (ENSMPUG00000005480) #33	DCHS1 (ENSMPUG00000005461) #34	ENSMPUG00000005449 #35
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000162834.b	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Equus	ANCESTRAL SPECIES	40							ENSGT01090000260013.b.a.a.a.a.y	ENSGT01100000263522.A.d.a.a.x.a	ENSGT01100000263522.A.d.a.a.x.b	ENSGT01090000260013.b.a.a.a.a.z	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.a ##37
Donkey	MODERN SPECIES	12	ENSEASG00005001612	ENSEASG00005001616	ENSEASG00005001618	ENSEASG00005025145	ENSEASG00005030172	ENSEASG00005029391	ENSEASG00005001628	ENSEASG00005029144	ENSEASG00005023561	ENSEASG00005001634	ENSEASG00005001641	FHIP1B (ENSEASG00005001645) #20	OR52W1 (ENSEASG00005001640) #18	C11orf42 (ENSEASG00005001643) #19	CNGA4 (ENSEASG00005001650) #21	CCKBR (ENSEASG00005001654) #22	CAVIN3 (ENSEASG00005024523) #23	SMPD1 (ENSEASG00005001666) #24	APBB1 (ENSEASG00005001670) #25	HPX (ENSEASG00005001677) #26	TRIM3 (ENSEASG00005001692) #27	ARFIP2 (ENSEASG00005001702) #28	TIMM10B (ENSEASG00005032667) #29	ENSEASG00005029985	ENSEASG00005001731	RRP8 (ENSEASG00005001761) #30	ILK (ENSEASG00005001817) #31	TAF10 (ENSEASG00005002262) #32	TPP1 (ENSEASG00005002355) #33	DCHS1 (ENSEASG00005003085) #34	ENSEASG00005029274 #35
Horse	MODERN SPECIES	28	OR52N4 (ENSECAG00000037675) ##18	OR52N4J (ENSECAG00000033922) ##18	OR56B2I (ENSECAG00000005238)	ENSECAG00000033556	OR56A3 (ENSECAG00000005353)	OR56B2 (ENSECAG00000005522)	OR56A4F (ENSECAG00000005004)	OR56A1 (ENSECAG00000005259)	OR52L2 (ENSECAG00000005383)	OR56B46 (ENSECAG00000028421)	OR56B45 (ENSECAG00000031453)	FHIP1B (ENSECAG00000009644) #20	C7H11orf42 (ENSECAG00000009630) #19	OR52W1 (ENSECAG00000000822) #18	CNGA4 (ENSECAG00000011616) #21	CCKBR (ENSECAG00000012751) #22	CAVIN3 (ENSECAG00000000857) #23	SMPD1 (ENSECAG00000012877) #24	APBB1 (ENSECAG00000014015) #25	HPX (ENSECAG00000016475) #26	TRIM3 (ENSECAG00000056285) #27	ARFIP2 (ENSECAG00000019888) #28	TIMM10B (ENSECAG00000000811) #29	DNHD1 (ENSECAG00000006457)	RRP8 (ENSECAG00000006612) #30	ILK (ENSECAG00000007599) #31	TAF10 (ENSECAG00000007794) #32	TPP1 (ENSECAG00000007829) #33	DCHS1 (ENSECAG00000009296) #34	MRPL17 (ENSECAG00000010156) #35	OR2AG2 (ENSECAG00000046473)
Chiroptera	ANCESTRAL SPECIES	5	ENSGT01090000260056.a.a.a.a.a.a.a.a	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Megabat	MODERN SPECIES	2446												ENSPVAG00000002401 #18	C11orf42 (ENSPVAG00000002403) #19	FHIP1B (ENSPVAG00000002405) #20	CNGA4 (ENSPVAG00000002406) #21	CCKBR (ENSPVAG00000002407) #22	CAVIN3 (ENSPVAG00000002408) #23	SMPD1 (ENSPVAG00000002410) #24	APBB1 (ENSPVAG00000002411) #25	HPX (ENSPVAG00000002413) #26	TRIM3 (ENSPVAG00000002414) #27	ARFIP2 (ENSPVAG00000002415) #28	ENSPVAG00000002416	ENSPVAG00000002417	ENSPVAG00000002419	RRP8 (ENSPVAG00000002420) #30	ILK (ENSPVAG00000002421) #31	TAF10 (ENSPVAG00000002422) #32	TPP1 (ENSPVAG00000002423) #33	DCHS1 (ENSPVAG00000002424) #34
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000162834.b	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01100000263528.A.a.a #18	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Microbat	MODERN SPECIES	1075	ENSMLUG00000007017	ENSMLUG00000007024	ENSMLUG00000006112	ENSMLUG00000009871	ENSMLUG00000022881	ENSMLUG00000028834	OR56A1 (ENSMLUG00000011392)	ENSMLUG00000011395	ENSMLUG00000022733 ##18	OR56B4 (ENSMLUG00000011402)	OR52W1 (ENSMLUG00000017443) #18	OR52B2 (ENSMLUG00000023626)	C11orf42 (ENSMLUG00000002101) #19	FHIP1B (ENSMLUG00000027682) #20	CNGA4 (ENSMLUG00000002105) #21	CCKBR (ENSMLUG00000012096) #22
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010010480 ##18	ENSRFEG00010010448 ##18	ENSRFEG00010010413 ##18	OR52N2 (ENSRFEG00010010387) ##18	ENSRFEG00010010362	ENSRFEG00010010341	OLR186 (ENSRFEG00010010321)	OR56A5 (ENSRFEG00010005033)	OR56A4 (ENSRFEG00010005028)	OR56A1 (ENSRFEG00010005024)	OR52L1 (ENSRFEG00010005017)	ENSRFEG00010005009 ##18	C11orf42 (ENSRFEG00010004994) #19	FHIP1B (ENSRFEG00010004978) #20	CNGA4 (ENSRFEG00010004967) #21	CCKBR (ENSRFEG00010004958) #22	CAVIN3 (ENSRFEG00010004945) #23	SMPD1 (ENSRFEG00010004931) #24	APBB1 (ENSRFEG00010004839) #25	HPX (ENSRFEG00010004759) #26	TRIM3 (ENSRFEG00010004738) #27	ARFIP2 (ENSRFEG00010004698) #28	TIMM10B (ENSRFEG00010004665) #29	DNHD1 (ENSRFEG00010004621)	RRP8 (ENSRFEG00010004563) #30	ILK (ENSRFEG00010004532) #31	TAF10 (ENSRFEG00010004513) #32	TPP1 (ENSRFEG00010004469) #33	DCHS1 (ENSRFEG00010004414) #34	MRPL17 (ENSRFEG00010004400) #35	ENSRFEG00010004390 #36
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000155550.a.a.a.b.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.b.a.a	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Suina	ANCESTRAL SPECIES	5	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.a.a.b.b	ENSGT00940000155550.a.a.a.b.a.a	ENSGT00940000161235	ENSGT00940000162834.b	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Chacoan peccary	MODERN SPECIES	806	OR52N1 (ENSCWAG00000008246) ##18	ENSCWAG00000008203 ##18	OR52N2 (ENSCWAG00000008188) ##18	OR52E4 (ENSCWAG00000008174)	ENSCWAG00000008111	ENSCWAG00000008000	OR56A4 (ENSCWAG00000007972)	OR56A5 (ENSCWAG00000007936)	OR52L1 (ENSCWAG00000007913)	OR56B4 (ENSCWAG00000007897)	OR52B2 (ENSCWAG00000007836)	OR52W1 (ENSCWAG00000007826) #18	C11orf42 (ENSCWAG00000007795) #19	FHIP1B (ENSCWAG00000007758) #20	CNGA4 (ENSCWAG00000007678) #21	CCKBR (ENSCWAG00000007627) #22	CAVIN3 (ENSCWAG00000007603) #23	SMPD1 (ENSCWAG00000007592) #24	APBB1 (ENSCWAG00000007254) #25	HPX (ENSCWAG00000007168) #26	TRIM3 (ENSCWAG00000007097) #27	ARFIP2 (ENSCWAG00000007031) #28	ENSCWAG00000007002 #29	ENSCWAG00000006966	ENSCWAG00000006941	RRP8 (ENSCWAG00000006892) #30	ILK (ENSCWAG00000006809) #31	TAF10 (ENSCWAG00000006764) #32	TPP1 (ENSCWAG00000006176) #33	DCHS1 (ENSCWAG00000006103) #34	MRPL17 (ENSCWAG00000006082) #35
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000155550.a.a.a.b.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.b.a.a	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000155550.a.a.a.b.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.b.a.a	ENSGT00940000162834.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Cetacea	ANCESTRAL SPECIES	4	ENSGT01090000259999.G.a.b.b.b	ENSGT01090000259999.G.a.b.a	ENSGT00940000156216	ENSGT00940000163476	ENSGT00940000164934	ENSGT00940000162659	ENSGT00390000010849.d	ENSGT00940000162912	ENSGT00940000162320	ENSGT00940000163021	ENSGT00940000163046	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01090000259999.G.a.b.a	ENSGT00940000156216	ENSGT00940000163476	ENSGT00940000164934	ENSGT00940000162659	ENSGT00390000010849.d	ENSGT00940000162912	ENSGT00940000162320	ENSGT00940000163021	ENSGT01090000260056.a.a.a.b	ENSGT00940000163046	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01090000259999.G.a.b.b.b	ENSGT00940000156216	ENSGT00940000163476	ENSGT00940000164934	ENSGT00940000162659	ENSGT00390000010849.d	ENSGT00940000162912	ENSGT00940000162320	ENSGT00940000163021	ENSGT01090000260056.a.a.a.b	ENSGT00940000163046	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326.e.a #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01090000259999.G.a.b.b.b	ENSGT00940000156216	ENSGT00940000163476	ENSGT00940000164934	ENSGT00940000162659	ENSGT00390000010849.d	ENSGT00940000162912	ENSGT00940000162320	ENSGT00940000163021	ENSGT01090000260056.a.a.a.b	ENSGT00940000163046	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326.e.a #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01090000259999.F.b	ENSGT01100000263490.D.a.a	ENSGT01090000259999.G.a.b.b.b	ENSGT00940000164934	ENSGT00940000156216	ENSGT00390000010849.d	ENSGT00940000162912	ENSGT00940000162320	ENSGT00940000163021	ENSGT01090000260056.a.a.a.b	ENSGT00940000163046	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326.f #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Narwhal	MODERN SPECIES	314	TRIM68 (ENSMMNG00015019932)	OR51E1 (ENSMMNG00015019946)	ENSMMNG00015019953	OR51E2 (ENSMMNG00015019972)	OR51C1P (ENSMMNG00015019985)	ENSMMNG00015020038	ENSMMNG00015020056	ENSMMNG00015020074	TRIM6 (ENSMMNG00015020115)	OR52E5 (ENSMMNG00015020236)	OR56A1 (ENSMMNG00015020363)	ENSMMNG00015020385 #18	C11orf42 (ENSMMNG00015020393) #19	FHIP1B (ENSMMNG00015020418) #20	CNGA4 (ENSMMNG00015020435) #21	CCKBR (ENSMMNG00015020463) #22	CAVIN3 (ENSMMNG00015020494) #23	SMPD1 (ENSMMNG00015020508) #24	APBB1 (ENSMMNG00015020560) #25	HPX (ENSMMNG00015020670) #26	TRIM3 (ENSMMNG00015020709) #27	ARFIP2 (ENSMMNG00015020778) #28	TIMM10B (ENSMMNG00015020885) #29	ENSMMNG00015020897	ENSMMNG00015020913	RRP8 (ENSMMNG00015020987) #30	ILK (ENSMMNG00015021024) #31	TAF10 (ENSMMNG00015021052) #32	TPP1 (ENSMMNG00015021098) #33	DCHS1 (ENSMMNG00015021194) #34	MRPL17 (ENSMMNG00015021208) #35
Beluga whale	MODERN SPECIES	32	TRIM68 (ENSDLEG00000010920)	OR51E1 (ENSDLEG00000010913)	ENSDLEG00000010869	OR51E2 (ENSDLEG00000010857)	OR51C1P (ENSDLEG00000010851)	ENSDLEG00000010836	ENSDLEG00000010815	ENSDLEG00000010789	UBQLN3 (ENSDLEG00000010777)	ENSDLEG00000010767	ENSDLEG00000010761	OR52E5 (ENSDLEG00000010335)	CUNH11orf42 (ENSDLEG00000010253) #19	FHIP1B (ENSDLEG00000010190) #20	CNGA4 (ENSDLEG00000010161) #21	CCKBR (ENSDLEG00000010143) #22	CAVIN3 (ENSDLEG00000010130) #23	SMPD1 (ENSDLEG00000010112) #24	APBB1 (ENSDLEG00000010059) #25	HPX (ENSDLEG00000010022) #26	TRIM3 (ENSDLEG00000009966) #27	ARFIP2 (ENSDLEG00000009934) #28	TIMM10B (ENSDLEG00000009915)	DNHD1 (ENSDLEG00000009780)	RRP8 (ENSDLEG00000009753) #30	ILK (ENSDLEG00000009725) #31	TAF10 (ENSDLEG00000009705) #32	TPP1 (ENSDLEG00000009681) #33	DCHS1 (ENSDLEG00000009642) #34	MRPL17 (ENSDLEG00000009624) #35	ENSDLEG00000009619 #36
Vaquita	MODERN SPECIES	19	OR51E2 (ENSPSNG00000008079)	OR51C1P (ENSPSNG00000008140)	ENSPSNG00000008580	ENSPSNG00000008599	ENSPSNG00000008643	ENSPSNG00000008742	ENSPSNG00000008775	UBQLN3 (ENSPSNG00000008813)	TRIM6 (ENSPSNG00000008858)	OR52E5 (ENSPSNG00000009098)	OR56A1 (ENSPSNG00000009172)	OR52W1 (ENSPSNG00000009250) #18	C11orf42 (ENSPSNG00000009276) #19	FHIP1B (ENSPSNG00000009310) #20	CNGA4 (ENSPSNG00000009358) #21	CCKBR (ENSPSNG00000009408) #22	CAVIN3 (ENSPSNG00000009468) #23	SMPD1 (ENSPSNG00000009506) #24	APBB1 (ENSPSNG00000009577) #25	HPX (ENSPSNG00000009822) #26	TRIM3 (ENSPSNG00000010005) #27	ARFIP2 (ENSPSNG00000010197) #28	TIMM10B (ENSPSNG00000010365) #29	ENSPSNG00000010407	ENSPSNG00000010483	RRP8 (ENSPSNG00000010553) #30	ILK (ENSPSNG00000010650) #31	TAF10 (ENSPSNG00000010753) #32	TPP1 (ENSPSNG00000010870) #33	DCHS1 (ENSPSNG00000011160) #34	MRPL17 (ENSPSNG00000011239) #35
Dolphin	MODERN SPECIES	2218												OR52E5 (ENSTTRG00000006694)	C11orf42 (ENSTTRG00000006711) #19	FHIP1B (ENSTTRG00000006717) #20	CNGA4 (ENSTTRG00000006723) #21	CCKBR (ENSTTRG00000006726) #22
Blue whale	MODERN SPECIES	19	OR51E1 (ENSBMSG00010021284)	OR51E2 (ENSBMSG00010021292)	OR51C1P (ENSBMSG00010021297)	ENSBMSG00010021324	ENSBMSG00010021397	ENSBMSG00010021411	ENSBMSG00010021419	ENSBMSG00010021427	OR52B6 (ENSBMSG00010021493)	UBQLN3 (ENSBMSG00010021714)	TRIM6 (ENSBMSG00010021719)	FHIP1B (ENSBMSG00010021760) #20	OR52W1 (ENSBMSG00010021771) #18	C11orf42 (ENSBMSG00010021773) #19	CNGA4 (ENSBMSG00010021778) #21	CCKBR (ENSBMSG00010021785) #22	CAVIN3 (ENSBMSG00010021788) #23	SMPD1 (ENSBMSG00010021791) #24	APBB1 (ENSBMSG00010021805) #25	HPX (ENSBMSG00010021835) #26	TRIM3 (ENSBMSG00010021846) #27	ARFIP2 (ENSBMSG00010021854) #28	TIMM10B (ENSBMSG00010021864) #29	ENSBMSG00010021866	ENSBMSG00010021870	RRP8 (ENSBMSG00010021876) #30	ILK (ENSBMSG00010021882) #31	TAF10 (ENSBMSG00010021888) #32	TPP1 (ENSBMSG00010021892) #33	MRPL17 (ENSBMSG00010021925) #35	ENSBMSG00010021930
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000155550.a.a.a.b.a.a.a.a	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235.i	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.gb.a #36
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000155550.a.a.a.b.a.a.a.a	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235.i	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.gb.a #36
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000155550.a.a.a.b.a.a.a.a	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235.i	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT00390000015164.t	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.gb.a #36
Bovinae	ANCESTRAL SPECIES	21	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.b.a.a.a.a	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235.i	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT00390000015164.t	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00940000161841.i.a.b.b.a	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698.m #35
American bison	MODERN SPECIES	3040											OR56B4 (ENSBBBG00000014571)	OR52B2 (ENSBBBG00000003481)	OR52W1 (ENSBBBG00000014577) #18	FHIP1B (ENSBBBG00000014602) #20	ENSBBBG00000014611 #21	CCKBR (ENSBBBG00000003534) #22	CAVIN3 (ENSBBBG00000014634) #23	ENSBBBG00000014648	SMPD1 (ENSBBBG00000014666) #24	APBB1 (ENSBBBG00000001181) #25	HPX (ENSBBBG00000001132) #26	TRIM3 (ENSBBBG00000001061) #27	ARFIP2 (ENSBBBG00000000936) #28	TIMM10B (ENSBBBG00000000916) #29	ENSBBBG00000000903	ENSBBBG00000000894	RRP8 (ENSBBBG00000000870) #30	ILK (ENSBBBG00000003685) #31	TAF10 (ENSBBBG00000014932) #32	TPP1 (ENSBBBG00000000805) #33	DCHS1 (ENSBBBG00000015059) #34
Bos	ANCESTRAL SPECIES	20	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235.i	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a.r.b	ENSGT01090000260013.b.a.a.a.a.r.a	ENSGT01100000263522.A.d.a.a.w	ENSGT00390000015164.t	ENSGT01100000263522.A.d.a.a.v	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00990000210921	ENSGT01100000263518.C	ENSGT00950000182910.a.a.b #23	ENSGT00940000161841.i.a.b.b.a	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326.g #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33
Bos_a	ANCESTRAL SPECIES	15	ENSGT00940000155550.a.a.a.b.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.b.a.a.a.a	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000162834.b	ENSGT00940000161235.i	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a.q	ENSGT01090000260013.b.a.a.a.a.r.a	ENSGT01100000263522.A.d.a.a.v.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00990000210921	ENSGT00950000182910.a.a.b #23	ENSGT00940000161841.i.a.b.b.a	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326.g #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34
Domestic yak	MODERN SPECIES	4	ENSBGRG00000013567	ENSBGRG00000013591	ENSBGRG00000013612	ENSBGRG00000013620	OR56A5 (ENSBGRG00000013637)	ENSBGRG00000013653	OR56A1 (ENSBGRG00000013755)	ENSBGRG00000013784	ENSBGRG00000013812	OR56B4 (ENSBGRG00000013867)	OR52B2 (ENSBGRG00000013876)	OR52W1 (ENSBGRG00000013895) #18	C11orf42 (ENSBGRG00000013913) #19	FHIP1B (ENSBGRG00000013943) #20	CNGA4 (ENSBGRG00000014037) #21	CCKBR (ENSBGRG00000014135) #22	ENSBGRG00000014283	CAVIN3 (ENSBGRG00000014340) #23	ENSBGRG00000014363	SMPD1 (ENSBGRG00000014387) #24	APBB1 (ENSBGRG00000014498) #25	HPX (ENSBGRG00000015205) #26	TRIM3 (ENSBGRG00000015323) #27	ARFIP2 (ENSBGRG00000015468) #28	ENSBGRG00000003659 #29	ENSBGRG00000003674 #29	ENSBGRG00000003719	ENSBGRG00000003732	RRP8 (ENSBGRG00000003778) #30	ILK (ENSBGRG00000003873) #31	TAF10 (ENSBGRG00000004125) #32
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000155550.a.a.a.b.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.a.a.b.a.a.a.b	ENSGT00940000162834.b	ENSGT00940000162834.a	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT00390000015164.t	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.gb.a #36
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020012647	ENSOARG00020012632	ENSOARG00020012611	ENSOARG00020012586	ENSOARG00020012543	ENSOARG00020012398	ENSOARG00020012365	ENSOARG00020012321	ENSOARG00020012290	ENSOARG00020012183	OR52B2 (ENSOARG00020012155)	OR52W1 (ENSOARG00020012127) #18	C11orf42 (ENSOARG00020012085) #19	FHIP1B (ENSOARG00020011924) #20	CNGA4 (ENSOARG00020011776) #21	CCKBR (ENSOARG00020011613) #22	CAVIN3 (ENSOARG00020011566) #23	SMPD1 (ENSOARG00020011513) #24	APBB1 (ENSOARG00020010925) #25	HPX (ENSOARG00020010803) #26	TRIM3 (ENSOARG00020010605) #27	ARFIP2 (ENSOARG00020010185) #28	TIMM10B (ENSOARG00020010074) #29	ENSOARG00020009925	ENSOARG00020009879	RRP8 (ENSOARG00020009794) #30	ILK (ENSOARG00020009598) #31	TAF10 (ENSOARG00020009554) #32	TPP1 (ENSOARG00020009332) #33	DCHS1 (ENSOARG00020009176) #34	MRPL17 (ENSOARG00020009135) #35
Siberian musk deer	MODERN SPECIES	1169	ENSMMSG00000021873	ENSMMSG00000021880	OR52E4 (ENSMMSG00000016298)	ENSMMSG00000016314	ENSMMSG00000016332	ENSMMSG00000016375	ENSMMSG00000016396	ENSMMSG00000016409	ENSMMSG00000016443 ##18	OR56B4 (ENSMMSG00000016483)	ENSMMSG00000016509	OR52B2 (ENSMMSG00000016533)	C11orf42 (ENSMMSG00000016546) #19	FHIP1B (ENSMMSG00000016594) #20	CNGA4 (ENSMMSG00000016696) #21	CCKBR (ENSMMSG00000016788) #22	ENSMMSG00000016868	CAVIN3 (ENSMMSG00000016891) #23	SMPD1 (ENSMMSG00000016910) #24	APBB1 (ENSMMSG00000016950) #25	HPX (ENSMMSG00000017419) #26	ENSMMSG00000017529 #27	ARFIP2 (ENSMMSG00000017622) #28	TIMM10B (ENSMMSG00000017727) #29	ENSMMSG00000017744	ENSMMSG00000017805	RRP8 (ENSMMSG00000017866) #30	ILK (ENSMMSG00000017911) #31	TAF10 (ENSMMSG00000017970) #32	TPP1 (ENSMMSG00000018032) #33	DCHS1 (ENSMMSG00000018170) #34
Camelidae	ANCESTRAL SPECIES	70	ENSGT01100000263528.D.c.b.b.b.a.b.b ##18	ENSGT01100000263522.A.d.b	ENSGT01100000263528.D.c.a.a ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.a.a.a.a	ENSGT01090000260056.a.a.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Arabian camel	MODERN SPECIES	1	ENSCDRG00005000159 ##18	ENSCDRG00005000154 ##18	ENSCDRG00005000131 ##18	OR56B2P (ENSCDRG00005000121)	OR52N1 (ENSCDRG00005016404) ##18	OR52N2 (ENSCDRG00005016395) ##18	OR56A4 (ENSCDRG00005016330)	OR56A1 (ENSCDRG00005016269)	OR56B4 (ENSCDRG00005016239)	ENSCDRG00005016213	OR52B2 (ENSCDRG00005016204)	OR52W1 (ENSCDRG00005016196) #18	C11orf42 (ENSCDRG00005016166) #19	FHIP1B (ENSCDRG00005016093) #20	CNGA4 (ENSCDRG00005015962) #21	CCKBR (ENSCDRG00005015928) #22	ENSCDRG00005015890 #23	SMPD1 (ENSCDRG00005015860) #24	APBB1 (ENSCDRG00005015508) #25	HPX (ENSCDRG00005015442) #26	TRIM3 (ENSCDRG00005015334) #27	ARFIP2 (ENSCDRG00005015094) #28	TIMM10B (ENSCDRG00005015056) #29	ENSCDRG00005015025	ENSCDRG00005015000	RRP8 (ENSCDRG00005014917) #30	ILK (ENSCDRG00005014817) #31	TAF10 (ENSCDRG00005014764) #32	TPP1 (ENSCDRG00005014509) #33	DCHS1 (ENSCDRG00005014203) #34	MRPL17 (ENSCDRG00005014149) #35
Eulipotyphla	ANCESTRAL SPECIES	1888																ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23
Hedgehog	MODERN SPECIES	14749																ENSEEUG00000012683 #22	CAVIN3 (ENSEEUG00000012703) #23
Common shrew	MODERN SPECIES	10330																CCKBR (ENSSARG00000000918) #22
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Primates	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Haplorrhini	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.a.a.a.a.a.r	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b
Simiiformes	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT00940000161235	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Catarrhini	ANCESTRAL SPECIES	1	ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263522.A.d.b	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.c.a.a ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a	ENSGT01100000263528.A.a.b ##18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Hominoidea	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT01090000260013.b.a.a.a.a.f	ENSGT00940000161235	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a.e	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Hominidae	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT01090000260013.b.a.a.a.a.f	ENSGT00940000161235	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a.e	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT01090000260013.b.a.a.a.a.f	ENSGT00940000161235	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a.e	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT01090000260013.b.a.a.a.a.f	ENSGT00940000161235	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a.e	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Pan	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000162834	ENSGT01090000260013.b.a.a.a.a.f	ENSGT00940000161235	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a.e	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Bonobo	MODERN SPECIES	2	OR52E5 (ENSPPAG00000026404)	OR56A3 (ENSPPAG00000016608)	ENSPPAG00000027678	OR52L1 (ENSPPAG00000012000)	OR56A4 (ENSPPAG00000019397)	OR56A1 (ENSPPAG00000020365)	ENSPPAG00000034552	ENSPPAG00000036208	ENSPPAG00000037080 ##18	OR56B4 (ENSPPAG00000018904)	ENSPPAG00000039073	OR52W1 (ENSPPAG00000025297) #18	C11orf42 (ENSPPAG00000001175) #19	FHIP1B (ENSPPAG00000030787) #20	CNGA4 (ENSPPAG00000033731) #21	CCKBR (ENSPPAG00000015285) #22	CAVIN3 (ENSPPAG00000042924) #23	ENSPPAG00000031490 #24	APBB1 (ENSPPAG00000035675) #25	HPX (ENSPPAG00000042281) #26	TRIM3 (ENSPPAG00000036529) #27	ARFIP2 (ENSPPAG00000042484) #28	TIMM10B (ENSPPAG00000040105) #29	DNHD1 (ENSPPAG00000036498)	RRP8 (ENSPPAG00000040792) #30	ILK (ENSPPAG00000029774) #31	ENSPPAG00000036624 #32	TPP1 (ENSPPAG00000035179) #33	DCHS1 (ENSPPAG00000038073) #34	MRPL17 (ENSPPAG00000038749) #35	ENSPPAG00000026745 #36
Human	MODERN SPECIES	2	OR52E6 (ENSG00000205409)	OR52E8 (ENSG00000183269)	OR52E4 (ENSG00000180974)	OR52E5 (ENSG00000277932)	OR56A3 (ENSG00000184478)	OR56A5 (ENSG00000188691)	OR52L1 (ENSG00000183313)	OR56A4 (ENSG00000183389)	OR56A1 (ENSG00000180934)	OR56B4 (ENSG00000180919)	OR52B2 (ENSG00000255307)	OR52W1 (ENSG00000175485) #18	C11orf42 (ENSG00000180878) #19	FHIP1B (ENSG00000051009) #20	CNGA4 (ENSG00000132259) #21	CCKBR (ENSG00000110148) #22	CAVIN3 (ENSG00000170955) #23	SMPD1 (ENSG00000166311) #24	APBB1 (ENSG00000166313) #25	HPX (ENSG00000110169) #26	TRIM3 (ENSG00000110171) #27	ARFIP2 (ENSG00000132254) #28	TIMM10B (ENSG00000132286) #29	DNHD1 (ENSG00000179532)	RRP8 (ENSG00000132275) #30	ILK (ENSG00000166333) #31	TAF10 (ENSG00000166337) #32	TPP1 (ENSG00000166340) #33	DCHS1 (ENSG00000166341) #34	MRPL17 (ENSG00000158042) #35	OR2AG2 (ENSG00000188124)
Orangutan	MODERN SPECIES	2	TRIM34 (ENSPPYG00000003565)	TRIM5 (ENSPPYG00000003564)	TRIM22 (ENSPPYG00000003563)	OR52N4 (ENSPPYG00000003560) ##18	OR52N5 (ENSPPYG00000037124) ##18	OR52N1 (ENSPPYG00000003559) ##18	OR52L1 (ENSPPYG00000038127)	OR56A4 (ENSPPYG00000003556)	OR56A1 (ENSPPYG00000003555)	ENSPPYG00000039725	OR56B4 (ENSPPYG00000003553)	OR52B2 (ENSPPYG00000039798)	C11orf42 (ENSPPYG00000003551) #19	FHIP1B (ENSPPYG00000003550) #20	CNGA4 (ENSPPYG00000003549) #21	CCKBR (ENSPPYG00000003548) #22	CAVIN3 (ENSPPYG00000003547) #23	SMPD1 (ENSPPYG00000003546) #24	APBB1 (ENSPPYG00000003545) #25	HPX (ENSPPYG00000003544) #26	TRIM3 (ENSPPYG00000003543) #27	ARFIP2 (ENSPPYG00000003542) #28	TIMM10B (ENSPPYG00000003541) #29	DNHD1 (ENSPPYG00000003539)	RRP8 (ENSPPYG00000003538) #30	ILK (ENSPPYG00000003537) #31	TAF10 (ENSPPYG00000003536) #32	TPP1 (ENSPPYG00000003535) #33	DCHS1 (ENSPPYG00000031930) #34	MRPL17 (ENSPPYG00000039892) #35	OR2AG2 (ENSPPYG00000030996)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000154647	ENSGT00940000163787	ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263522.A.d.b	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000162320	ENSGT00940000154647	ENSGT00940000163787	ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01100000263522.A.d.a.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368.o #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000154647	ENSGT00940000163787	ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260013.b.a.a.a.a.f	ENSGT00940000161235	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368.o #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000162320	ENSGT00940000154647	ENSGT00940000163787	ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.C ##18	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368.o #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Pig-tailed macaque	MODERN SPECIES	149										OR52E5 (ENSMNEG00000044449)	OR52L1 (ENSMNEG00000043000)	OR56A4 (ENSMNEG00000038450)	FHIP1B (ENSMNEG00000045495) #20	C11orf42 (ENSMNEG00000032516) #19	CNGA4 (ENSMNEG00000030801) #21	CCKBR (ENSMNEG00000041531) #22	CAVIN3 (ENSMNEG00000039190) #23	ENSMNEG00000028380	SMPD1 (ENSMNEG00000028675) #24	APBB1 (ENSMNEG00000027172) #25	HPX (ENSMNEG00000039049) #26	TRIM3 (ENSMNEG00000021605) #27	ARFIP2 (ENSMNEG00000042909) #28	TIMM10B (ENSMNEG00000027230) #29	ENSMNEG00000036343	RRP8 (ENSMNEG00000029648) #30	ILK (ENSMNEG00000029810) #31	ENSMNEG00000027938 #32	TPP1 (ENSMNEG00000036554) #33	DCHS1 (ENSMNEG00000008159) #34	MRPL17 (ENSMNEG00000031071) #35
Macaca_a	ANCESTRAL SPECIES	3	ENSGT01090000260043.a.a.a.b.a.a.a.b	ENSGT00940000163021	ENSGT00940000162320	ENSGT00940000154647	ENSGT00940000163787	ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368.o #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Rhesus	MODERN SPECIES	5	TRIM6 (ENSMMUG00000013490)	TRIM5 (ENSMMUG00000000335)	TRIM22 (ENSMMUG00000000338)	ENSMMUG00000055412 ##18	OR52N4 (ENSMMUG00000000450) ##18	OR52N5 (ENSMMUG00000051279) ##18	OR52N2 (ENSMMUG00000052944) ##18	OR52E4 (ENSMMUG00000049399)	OR52L1 (ENSMMUG00000013975)	OR56A1 (ENSMMUG00000013978)	OR52B2 (ENSMMUG00000053716)	OR52W1 (ENSMMUG00000056550) #18	C14H11orf42 (ENSMMUG00000016881) #19	FHIP1B (ENSMMUG00000016882) #20	CNGA4 (ENSMMUG00000016883) #21	CCKBR (ENSMMUG00000016884) #22	CAVIN3 (ENSMMUG00000057794) #23	SMPD1 (ENSMMUG00000007717) #24	APBB1 (ENSMMUG00000007723) #25	HPX (ENSMMUG00000007725) #26	TRIM3 (ENSMMUG00000007728) #27	ARFIP2 (ENSMMUG00000007731) #28	TIMM10B (ENSMMUG00000007732) #29	DNHD1 (ENSMMUG00000054897)	RRP8 (ENSMMUG00000007738) #30	ILK (ENSMMUG00000007741) #31	TAF10 (ENSMMUG00000007743) #32	TPP1 (ENSMMUG00000007745) #33	DCHS1 (ENSMMUG00000007754) #34	MRPL17 (ENSMMUG00000004544) #35	OR2AG2 (ENSMMUG00000058745)
Cercopithecinae_b	ANCESTRAL SPECIES	65											ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368.o #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35
Olive baboon	MODERN SPECIES	3	OR52B6 (ENSPANG00000043794)	UBQLNL (ENSPANG00000025846)	UBQLN3 (ENSPANG00000045985)	ENSPANG00000039579	OR56A4 (ENSPANG00000041251)	ENSPANG00000040217	OR56A1 (ENSPANG00000042172)	ENSPANG00000048931	ENSPANG00000039129	ENSPANG00000048067	OR52B2 (ENSPANG00000045411)	OR52W1 (ENSPANG00000011368) #18	FHIP1B (ENSPANG00000002499) #20	C11orf42 (ENSPANG00000025847) #19	CNGA4 (ENSPANG00000009250) #21	CCKBR (ENSPANG00000024372) #22	CAVIN3 (ENSPANG00000025848) #23	SMPD1 (ENSPANG00000004793) #24	APBB1 (ENSPANG00000019479) #25	HPX (ENSPANG00000014360) #26	TRIM3 (ENSPANG00000006536) #27	ARFIP2 (ENSPANG00000008374) #28	TIMM10B (ENSPANG00000043546) #29	DNHD1 (ENSPANG00000009251)	RRP8 (ENSPANG00000006537) #30	ILK (ENSPANG00000023648) #31	TAF10 (ENSPANG00000019610) #32	TPP1 (ENSPANG00000015782) #33	DCHS1 (ENSPANG00000024148) #34	MRPL17 (ENSPANG00000025791) #35	ENSPANG00000047424
Cercopithecinae_d	ANCESTRAL SPECIES	182												ENSGT01100000263522.A.d.a.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368.o #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35
Sooty mangabey	MODERN SPECIES	455											OR52E5 (ENSCATG00000031309)	OR56B4 (ENSCATG00000030486)	C11orf42 (ENSCATG00000044386) #19	FHIP1B (ENSCATG00000035984) #20	CNGA4 (ENSCATG00000038185) #21	CCKBR (ENSCATG00000036051) #22	CAVIN3 (ENSCATG00000012570) #23	ENSCATG00000038288	SMPD1 (ENSCATG00000034780) #24	APBB1 (ENSCATG00000029612) #25	HPX (ENSCATG00000031965) #26	TRIM3 (ENSCATG00000029972) #27	ARFIP2 (ENSCATG00000035041) #28	TIMM10B (ENSCATG00000037555) #29	DNHD1 (ENSCATG00000033047)	RRP8 (ENSCATG00000029344) #30	ILK (ENSCATG00000041512) #31	ENSCATG00000037755 #32	TPP1 (ENSCATG00000036557) #33	DCHS1 (ENSCATG00000036519) #34	MRPL17 (ENSCATG00000035650) #35
Drill	MODERN SPECIES	337													C11orf42 (ENSMLEG00000041851) #19	FHIP1B (ENSMLEG00000012027) #20	CNGA4 (ENSMLEG00000015992) #21	CCKBR (ENSMLEG00000040610) #22	CAVIN3 (ENSMLEG00000029092) #23	ENSMLEG00000031941	APBB1 (ENSMLEG00000029390) #25	HPX (ENSMLEG00000041528) #26	TRIM3 (ENSMLEG00000040156) #27	ARFIP2 (ENSMLEG00000025738) #28	TIMM10B (ENSMLEG00000038328) #29	DNHD1 (ENSMLEG00000037910)	RRP8 (ENSMLEG00000035110) #30	ILK (ENSMLEG00000032410) #31	ENSMLEG00000033680 #32	TPP1 (ENSMLEG00000037652) #33	DCHS1 (ENSMLEG00000035614) #34	MRPL17 (ENSMLEG00000040344) #35
Vervet Monkey	MODERN SPECIES		OR51B5 (ENSCSAG00000019346)	OR51B6 (ENSCSAG00000019345)	OR51M1 (ENSCSAG00000019344)	OR51I2 (ENSCSAG00000019343)	UBQLN3 (ENSCSAG00000019342)	TRIM34 (ENSCSAG00000004285)	TRIM5 (ENSCSAG00000004290)	TRIM22 (ENSCSAG00000004294)	OR52N4 (ENSCSAG00000019341) ##18	OR56A4 (ENSCSAG00000019340)	OR56A1 (ENSCSAG00000019339)	OR52W1 (ENSCSAG00000019338) #18	C11orf42 (ENSCSAG00000004302) #19	FHIP1B (ENSCSAG00000004304) #20	CNGA4 (ENSCSAG00000004310) #21	CCKBR (ENSCSAG00000004311) #22	CAVIN3 (ENSCSAG00000004312) #23	SMPD1 (ENSCSAG00000004314) #24	APBB1 (ENSCSAG00000004315) #25	HPX (ENSCSAG00000004319) #26	TRIM3 (ENSCSAG00000004321) #27	ARFIP2 (ENSCSAG00000004324) #28	TIMM10B (ENSCSAG00000004326) #29	DNHD1 (ENSCSAG00000004338)	RRP8 (ENSCSAG00000004345) #30	ILK (ENSCSAG00000004353) #31	TAF10 (ENSCSAG00000004349) #32	TPP1 (ENSCSAG00000004358) #33	DCHS1 (ENSCSAG00000004365) #34	MRPL17 (ENSCSAG00000004367) #35	OR2AG2 (ENSCSAG00000019337)
Rhinopithecus	ANCESTRAL SPECIES	253											ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260045.C.e.a.a.a.b.b.b.a
Black snub-nosed monkey	MODERN SPECIES	1151													C11orf42 (ENSRBIG00000033852) #19	FHIP1B (ENSRBIG00000028050) #20	CNGA4 (ENSRBIG00000040192) #21	CCKBR (ENSRBIG00000031995) #22	CAVIN3 (ENSRBIG00000036139) #23	ENSRBIG00000034076	SMPD1 (ENSRBIG00000036543) #24	APBB1 (ENSRBIG00000036551) #25	HPX (ENSRBIG00000039947) #26	TRIM3 (ENSRBIG00000028885) #27	ARFIP2 (ENSRBIG00000039580) #28	TIMM10B (ENSRBIG00000042907) #29	DNHD1 (ENSRBIG00000037352)	RRP8 (ENSRBIG00000044485) #30	ILK (ENSRBIG00000034316) #31	TAF10 (ENSRBIG00000041663) #32	TPP1 (ENSRBIG00000032478) #33	DCHS1 (ENSRBIG00000031623) #34	MRPL17 (ENSRBIG00000040233) #35
Golden snub-nosed monkey	MODERN SPECIES	2435											OR56B4 (ENSRROG00000031373)	OR52B2 (ENSRROG00000038902)	C11orf42 (ENSRROG00000037779) #19	FHIP1B (ENSRROG00000000278) #20	CNGA4 (ENSRROG00000040654) #21	CCKBR (ENSRROG00000026722) #22	CAVIN3 (ENSRROG00000012641) #23	ENSRROG00000037814	SMPD1 (ENSRROG00000040466) #24	APBB1 (ENSRROG00000045560) #25	HPX (ENSRROG00000036557) #26	TRIM3 (ENSRROG00000039811) #27	ARFIP2 (ENSRROG00000036491) #28	TIMM10B (ENSRROG00000030921) #29	DNHD1 (ENSRROG00000038148)	RRP8 (ENSRROG00000045322) #30	ILK (ENSRROG00000028239) #31	TAF10 (ENSRROG00000043862) #32	TPP1 (ENSRROG00000040815) #33	DCHS1 (ENSRROG00000039837) #34	MRPL17 (ENSRROG00000032283) #35
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.a.a.a.a.q	ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a	ENSGT00940000162834	ENSGT00940000161235.b	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Cebidae	ANCESTRAL SPECIES		ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.a.a.a.a.q	ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a	ENSGT00940000162834	ENSGT00940000161235.b	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.l.b
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.b.b.a ##18	ENSGT01100000263528.D.c.a.b ##18	ENSGT01090000260056.a.a.a.a.a.a.a.a.q	ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a	ENSGT00940000162834	ENSGT00940000161235.b	ENSGT00940000163046.n	ENSGT00940000163046.o	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b ##37
Capuchin	MODERN SPECIES	370	TRIM22 (ENSCCAG00000023812)	ENSCCAG00000030713 ##18	ENSCCAG00000024079 ##18	OR56B1 (ENSCCAG00000030480)	OR52N4 (ENSCCAG00000032323) ##18	OR52N5 (ENSCCAG00000029441) ##18	OR52E6 (ENSCCAG00000021394)	OR56A5 (ENSCCAG00000016986)	OR56A4 (ENSCCAG00000010692)	ENSCCAG00000024805	OR52L1 (ENSCCAG00000019360)	OR56B4 (ENSCCAG00000029354)	C11orf42 (ENSCCAG00000021656) #19	CNGA4 (ENSCCAG00000024781) #21	FHIP1B (ENSCCAG00000032468) #20	CCKBR (ENSCCAG00000037130) #22	CAVIN3 (ENSCCAG00000026196) #23	SMPD1 (ENSCCAG00000015662) #24	APBB1 (ENSCCAG00000036812) #25	HPX (ENSCCAG00000037567) #26	TRIM3 (ENSCCAG00000022507) #27	ARFIP2 (ENSCCAG00000022412) #28	TIMM10B (ENSCCAG00000020901) #29	DNHD1 (ENSCCAG00000021762)	RRP8 (ENSCCAG00000035197) #30	ILK (ENSCCAG00000031007) #31	TAF10 (ENSCCAG00000034043) #32	TPP1 (ENSCCAG00000036940) #33	DCHS1 (ENSCCAG00000029695) #34	MRPL17 (ENSCCAG00000025049) #35	OR6A2 (ENSCCAG00000032315) ##37
Bolivian squirrel monkey	MODERN SPECIES	50	TRIM22 (ENSSBOG00000022819)	ENSSBOG00000030485 ##18	OR52N4 (ENSSBOG00000016424) ##18	OR52N5 (ENSSBOG00000031383) ##18	ENSSBOG00000018211	OR52E6 (ENSSBOG00000022828)	OR56A5 (ENSSBOG00000033646)	OR56A4 (ENSSBOG00000034881)	OR56A1 (ENSSBOG00000008726)	ENSSBOG00000035874	ENSSBOG00000035156	OR52W1 (ENSSBOG00000025295) #18	C11orf42 (ENSSBOG00000033456) #19	FHIP1B (ENSSBOG00000033927) #20	CNGA4 (ENSSBOG00000026834) #21	CCKBR (ENSSBOG00000035850) #22	CAVIN3 (ENSSBOG00000034305) #23
Marmoset	MODERN SPECIES	2	OR56B1 (ENSCJAG00000002543)	OR52N4 (ENSCJAG00000002547) ##18	OR52N2 (ENSCJAG00000021777) ##18	ENSCJAG00000077158	ENSCJAG00000045999	OR52E4 (ENSCJAG00000023286)	OR56A5 (ENSCJAG00000048276)	ENSCJAG00000070215	OR56A4 (ENSCJAG00000079530)	OR56A1 (ENSCJAG00000085124)	ENSCJAG00000071880	FHIP1B (ENSCJAG00000014340) #20	OR52W1 (ENSCJAG00000022245) #18	C11orf42 (ENSCJAG00000014410) #19	CNGA4 (ENSCJAG00000014312) #21	CCKBR (ENSCJAG00000014292) #22	CAVIN3 (ENSCJAG00000038304) #23	SMPD1 (ENSCJAG00000014259) #24	APBB1 (ENSCJAG00000014145) #25	HPX (ENSCJAG00000014134) #26	TRIM3 (ENSCJAG00000014089) #27	ARFIP2 (ENSCJAG00000014059) #28	TIMM10B (ENSCJAG00000073590) #29	ENSCJAG00000068805	RRP8 (ENSCJAG00000014012) #30	ILK (ENSCJAG00000013968) #31	TAF10 (ENSCJAG00000013950) #32	TPP1 (ENSCJAG00000013870) #33	DCHS1 (ENSCJAG00000013828) #34	MRPL17 (ENSCJAG00000082791) #35	OR2AG2 (ENSCJAG00000054604)
Mas night monkey	MODERN SPECIES	830	OR52N4 (ENSANAG00000016362) ##18	OR52N5 (ENSANAG00000027704) ##18	OR52N2 (ENSANAG00000015694) ##18	ENSANAG00000011932	OR52E6 (ENSANAG00000020831)	ENSANAG00000027487	OR56A4 (ENSANAG00000021719)	OR56A1 (ENSANAG00000014070)	ENSANAG00000022341	OR52L1 (ENSANAG00000017974)	OR56B4 (ENSANAG00000014116)	OR52W1 (ENSANAG00000017871) #18	C11orf42 (ENSANAG00000029081) #19	FHIP1B (ENSANAG00000035386) #20	CNGA4 (ENSANAG00000024797) #21	CCKBR (ENSANAG00000021245) #22	CAVIN3 (ENSANAG00000026725) #23	ENSANAG00000029210	SMPD1 (ENSANAG00000028051) #24	APBB1 (ENSANAG00000029393) #25	HPX (ENSANAG00000033788) #26	TRIM3 (ENSANAG00000027696) #27	ARFIP2 (ENSANAG00000031060) #28	TIMM10B (ENSANAG00000024296) #29	ENSANAG00000027422	ENSANAG00000029690	RRP8 (ENSANAG00000028524) #30	ILK (ENSANAG00000005387) #31	TAF10 (ENSANAG00000036461) #32	TPP1 (ENSANAG00000021142) #33	DCHS1 (ENSANAG00000034179) #34
Tarsier	MODERN SPECIES	5594										OR56A4 (ENSTSYG00000027316)	OR52L1 (ENSTSYG00000013574)	ENSTSYG00000037069	CUNH11orf42 (ENSTSYG00000001725) #19	FAM160A2 (ENSTSYG00000001738) #20	CNGA4 (ENSTSYG00000000649) #21	CCKBR (ENSTSYG00000000653) #22	CAVIN3 (ENSTSYG00000027837) #23	SMPD1 (ENSTSYG00000031193) #24	APBB1 (ENSTSYG00000026012) #25
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT01090000260056.a.a.a.a.a.a.a.a.r	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT00940000162834	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.a.a.a.a.q	ENSGT01090000260056.a.a.a.a.a.a.a.a.r	ENSGT00940000162834	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Mouse lemur	MODERN SPECIES	27	ENSMICG00000044545	TRIM6 (ENSMICG00000005107)	ENSMICG00000010972	TRIM34 (ENSMICG00000037370)	ENSMICG00000047018	ENSMICG00000029455	OR52N2 (ENSMICG00000041593) ##18	ENSMICG00000043976	ENSMICG00000046872	OR56A5 (ENSMICG00000002064)	OR56B4 (ENSMICG00000007227)	OR56A4 (ENSMICG00000045298)	C11orf42 (ENSMICG00000033046) #19	FHIP1B (ENSMICG00000007239) #20	CNGA4 (ENSMICG00000044379) #21	CCKBR (ENSMICG00000007249) #22	CAVIN3 (ENSMICG00000002084) #23	SMPD1 (ENSMICG00000002085) #24	APBB1 (ENSMICG00000038165) #25	HPX (ENSMICG00000046239) #26	TRIM3 (ENSMICG00000002100) #27	ARFIP2 (ENSMICG00000045534) #28	TIMM10B (ENSMICG00000002107) #29	DNHD1 (ENSMICG00000030707)	RRP8 (ENSMICG00000038472) #30	ILK (ENSMICG00000002134) #31	TPP1 (ENSMICG00000002141) #33	DCHS1 (ENSMICG00000002145) #34	MRPL17 (ENSMICG00000035814) #35	ENSMICG00000041707 ##37	ENSMICG00000032984 ##37
Lemuriformes_a	ANCESTRAL SPECIES	24	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263522.A.d.a.b	ENSGT00940000162834	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b
Greater bamboo lemur	MODERN SPECIES	1758		OR56A5 (ENSPSMG00000014047)	OR56A4 (ENSPSMG00000014037)	OR56A1 (ENSPSMG00000014029)	OR52L1 (ENSPSMG00000014025)	ENSPSMG00000014021 ##18	OR56B4 (ENSPSMG00000014015)	ENSPSMG00000014006	ENSPSMG00000013996	ENSPSMG00000013987	OR52B2 (ENSPSMG00000013982)	OR52W1 (ENSPSMG00000013976) #18	C11orf42 (ENSPSMG00000013975) #19	FHIP1B (ENSPSMG00000013937) #20	CNGA4 (ENSPSMG00000013891) #21	CCKBR (ENSPSMG00000013879) #22	CAVIN3 (ENSPSMG00000013862) #23
Coquerels sifaka	MODERN SPECIES	591		TRIM6 (ENSPCOG00000014255)	TRIM34 (ENSPCOG00000018651)	TRIM5 (ENSPCOG00000004953)	ENSPCOG00000023676 ##18	OR56B1 (ENSPCOG00000016382)	OR52N5 (ENSPCOG00000028028) ##18	OR56B2P (ENSPCOG00000015037)	ENSPCOG00000009864	ENSPCOG00000013767	OR56A5 (ENSPCOG00000008705)	OR56B4 (ENSPCOG00000012441)	C11orf42 (ENSPCOG00000010802) #19	FHIP1B (ENSPCOG00000027027) #20	CNGA4 (ENSPCOG00000022762) #21	CCKBR (ENSPCOG00000015365) #22	CAVIN3 (ENSPCOG00000010757) #23	SMPD1 (ENSPCOG00000024226) #24	APBB1 (ENSPCOG00000013017) #25	HPX (ENSPCOG00000022166) #26	TRIM3 (ENSPCOG00000015790) #27	ARFIP2 (ENSPCOG00000005594) #28	TIMM10B (ENSPCOG00000021820) #29	DNHD1 (ENSPCOG00000023555)	RRP8 (ENSPCOG00000024627) #30	ILK (ENSPCOG00000019092) #31	TAF10 (ENSPCOG00000026313) #32	TPP1 (ENSPCOG00000024177) #33	DCHS1 (ENSPCOG00000019695) #34	ENSPCOG00000014817 #35	ENSPCOG00000012759 ##37
Bushbaby	MODERN SPECIES	116	ENSOGAG00000015337	OR56A5 (ENSOGAG00000030397)	OR56A4 (ENSOGAG00000026929)	ENSOGAG00000027204	OR52L1 (ENSOGAG00000015345)	ENSOGAG00000028437 ##18	ENSOGAG00000026746	ENSOGAG00000024676	ENSOGAG00000024791	ENSOGAG00000002769	OR52B2 (ENSOGAG00000026381)	OR52W1 (ENSOGAG00000001400) #18	C11orf42 (ENSOGAG00000006503) #19	FHIP1B (ENSOGAG00000002770) #20	CNGA4 (ENSOGAG00000002772) #21	CCKBR (ENSOGAG00000002773) #22	CAVIN3 (ENSOGAG00000027618) #23	SMPD1 (ENSOGAG00000002779) #24	APBB1 (ENSOGAG00000002781) #25	HPX (ENSOGAG00000002783) #26	TRIM3 (ENSOGAG00000027002) #27	ARFIP2 (ENSOGAG00000002785) #28	TIMM10B (ENSOGAG00000033332) #29	DNHD1 (ENSOGAG00000030169)	RRP8 (ENSOGAG00000007184) #30	ILK (ENSOGAG00000007187) #31	TAF10 (ENSOGAG00000027347) #32	TPP1 (ENSOGAG00000007194) #33	DCHS1 (ENSOGAG00000024231) #34	MRPL17 (ENSOGAG00000014856) #35	ENSOGAG00000012320 #36
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Glires	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Rodentia	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.a.b.a	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Sciuridae	ANCESTRAL SPECIES	2	ENSGT01090000260056.a.a.a.a.a.a.a.a	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.k #36
Marmotini	ANCESTRAL SPECIES	22	ENSGT01090000260056.a.a.a.b.i	ENSGT00940000155550.a.b.k	ENSGT00940000161235.d.e.b	ENSGT00940000161235.d.f	ENSGT01100000263528.D.d.a.a ##18	ENSGT01100000263528.D.c.a.a ##18	ENSGT01100000263528.D.c.a.b.k.b ##18	ENSGT00940000161235.d.e.a	ENSGT00940000163046	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.k #36
Marmotini_b	ANCESTRAL SPECIES	129	ENSGT01100000263528.D.c.b.b.a.d ##18	ENSGT01100000263522.A.d.b.o	ENSGT01100000263528.D.c.b.b.a.c ##18	ENSGT01100000263528.D.c.b.b.b.a.b.a ##18	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.b.i	ENSGT00940000155550.a.b.l	ENSGT00940000161235.d.e.a	ENSGT00940000163046	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.k #36
Squirrel	MODERN SPECIES	442				ENSSTOG00000003642	ENSSTOG00000015291	ENSSTOG00000031692	OR52E5 (ENSSTOG00000026771)	ENSSTOG00000030362	OR56A1 (ENSSTOG00000033047)	ENSSTOG00000034429	OR52B2 (ENSSTOG00000021260)	OR52W1 (ENSSTOG00000013265) #18	C11orf42 (ENSSTOG00000013268) #19	FHIP1B (ENSSTOG00000013275) #20	CNGA4 (ENSSTOG00000013282) #21	CCKBR (ENSSTOG00000011354) #22	CAVIN3 (ENSSTOG00000016050) #23	SMPD1 (ENSSTOG00000009041) #24	APBB1 (ENSSTOG00000009066) #25	HPX (ENSSTOG00000031743) #26	TRIM3 (ENSSTOG00000025640) #27	ARFIP2 (ENSSTOG00000015033) #28	TIMM10B (ENSSTOG00000015036) #29	ENSSTOG00000030705	ENSSTOG00000029899	RRP8 (ENSSTOG00000016272) #30	ILK (ENSSTOG00000011619) #31	TAF10 (ENSSTOG00000011631) #32	TPP1 (ENSSTOG00000011638) #33	DCHS1 (ENSSTOG00000025568) #34	ENSSTOG00000003313 #35
Arctic ground squirrel	MODERN SPECIES	618								OR56A4 (ENSUPAG00010006089)	OR56A1 (ENSUPAG00010006096)	OR56B4 (ENSUPAG00010006127)	OR52B2 (ENSUPAG00010006128)	OR52W1 (ENSUPAG00010006135) #18	C11orf42 (ENSUPAG00010006138) #19	FHIP1B (ENSUPAG00010006144) #20	CNGA4 (ENSUPAG00010006245) #21	CCKBR (ENSUPAG00010006254) #22	CAVIN3 (ENSUPAG00010006261) #23	SMPD1 (ENSUPAG00010006268) #24	APBB1 (ENSUPAG00010006285) #25	HPX (ENSUPAG00010007110) #26	TRIM3 (ENSUPAG00010007116) #27	ARFIP2 (ENSUPAG00010007129) #28	TIMM10B (ENSUPAG00010007203) #29	ENSUPAG00010007215	RRP8 (ENSUPAG00010007222) #30	ILK (ENSUPAG00010007263) #31	TAF10 (ENSUPAG00010007279) #32	TPP1 (ENSUPAG00010007294) #33	DCHS1 (ENSUPAG00010007314) #34	MRPL17 (ENSUPAG00010007341) #35	ENSUPAG00010007352 #36
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000014576 ##18	ENSMMMG00000014589 ##18	ENSMMMG00000014601	ENSMMMG00000014605	ENSMMMG00000014613	ENSMMMG00000014637	ENSMMMG00000014642	ENSMMMG00000014651	OR56A1 (ENSMMMG00000014668)	OR56B4 (ENSMMMG00000014683)	OR52B2 (ENSMMMG00000014688)	OR52W1 (ENSMMMG00000014694) #18	C11orf42 (ENSMMMG00000014695) #19	FHIP1B (ENSMMMG00000014699) #20	CNGA4 (ENSMMMG00000014908) #21	CCKBR (ENSMMMG00000014916) #22	CAVIN3 (ENSMMMG00000014919) #23	SMPD1 (ENSMMMG00000014926) #24	APBB1 (ENSMMMG00000014931) #25	HPX (ENSMMMG00000015345) #26	TRIM3 (ENSMMMG00000015353) #27	ARFIP2 (ENSMMMG00000015366) #28	TIMM10B (ENSMMMG00000015480) #29	ENSMMMG00000015487	RRP8 (ENSMMMG00000015503) #30	ILK (ENSMMMG00000015510) #31	TAF10 (ENSMMMG00000015559) #32	TPP1 (ENSMMMG00000015567) #33	DCHS1 (ENSMMMG00000015573) #34	ENSMMMG00000015593 #35	ENSMMMG00000015601 #36
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005007964 ##18	OR52E4 (ENSSVLG00005007949)	OR52E5 (ENSSVLG00005007936)	OR56A3 (ENSSVLG00005007926)	OR56A4 (ENSSVLG00005007916)	ENSSVLG00005007893	ENSSVLG00005007880 ##18	OR56B4 (ENSSVLG00005007865)	ENSSVLG00005007844	ENSSVLG00005007824	ENSSVLG00005007809	OR52W1 (ENSSVLG00005007793) #18	C11orf42 (ENSSVLG00005007762) #19	FHIP1B (ENSSVLG00005007692) #20	CNGA4 (ENSSVLG00005007640) #21	CCKBR (ENSSVLG00005007574) #22	CAVIN3 (ENSSVLG00005007510) #23	SMPD1 (ENSSVLG00005007479) #24	APBB1 (ENSSVLG00005007218) #25	HPX (ENSSVLG00005007102) #26	ENSSVLG00005007076 #27	ARFIP2 (ENSSVLG00005006992) #28	TIMM10B (ENSSVLG00005006936) #29	ENSSVLG00005006905	ENSSVLG00005006876	ENSSVLG00005006819	ENSSVLG00005006785	ENSSVLG00005006757	ENSSVLG00005006676 #30	ILK (ENSSVLG00005006591) #31	ENSSVLG00005006530 #32
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263528.D.c.b.b.b.b ##18	ENSGT00940000162320	ENSGT00940000161235.d	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Hystricomorpha_a	ANCESTRAL SPECIES	47	ENSGT01090000260043.a.a.a.b.a.a.a.b	ENSGT00940000163021	ENSGT00940000154647	ENSGT00940000162320	ENSGT01100000263528.D.c.a.b ##18	ENSGT00940000161235.d	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01090000260043.a.b.a.b	ENSGT01100000263528.B.a ##18	ENSGT01100000263528.B.b ##18	ENSGT01100000263528.C ##18	ENSGT01100000263528.D.c.b.b.b.b ##18	ENSGT01100000263522.A.d.a.b	ENSGT01100000263528.D.c.a.b ##18	ENSGT00940000161235.d	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Long-tailed chinchilla	MODERN SPECIES	121	ENSCLAG00000017948	ENSCLAG00000015771 ##18	ENSCLAG00000017921 ##18	ENSCLAG00000017946 ##18	ENSCLAG00000016390 ##18	ENSCLAG00000018063 ##18	OR52N2 (ENSCLAG00000015756) ##18	ENSCLAG00000017982	OR56A3 (ENSCLAG00000018004)	OR56B4 (ENSCLAG00000016709)	ENSCLAG00000016797	ENSCLAG00000017952	C11orf42 (ENSCLAG00000017028) #19	FHIP1B (ENSCLAG00000014717) #20	CNGA4 (ENSCLAG00000015822) #21	CCKBR (ENSCLAG00000016095) #22	CAVIN3 (ENSCLAG00000016165) #23	APBB1 (ENSCLAG00000016385) #25	SMPD1 (ENSCLAG00000015736) #24	HPX (ENSCLAG00000015831) #26	TRIM3 (ENSCLAG00000016691) #27	ARFIP2 (ENSCLAG00000016235) #28	TIMM10B (ENSCLAG00000016675) #29	DNHD1 (ENSCLAG00000016233)	RRP8 (ENSCLAG00000016099) #30	ILK (ENSCLAG00000016735) #31	TAF10 (ENSCLAG00000016444) #32	TPP1 (ENSCLAG00000016546) #33	DCHS1 (ENSCLAG00000015967) #34	MRPL17 (ENSCLAG00000015854) #35	ENSCLAG00000016844 #36
Degu	MODERN SPECIES	187	ENSODEG00000008435	TRIM6 (ENSODEG00000010687)	TRIM34 (ENSODEG00000009221)	ENSODEG00000010404	OR56B1 (ENSODEG00000009163)	OR52N5 (ENSODEG00000011280) ##18	OR56A4 (ENSODEG00000019606)	OR52L1 (ENSODEG00000008875)	ENSODEG00000008859 ##18	OR56B4 (ENSODEG00000009118)	OR52B2 (ENSODEG00000019615)	C11orf42 (ENSODEG00000009450) #19	FHIP1B (ENSODEG00000010032) #20	CNGA4 (ENSODEG00000009610) #21	ENSODEG00000019633	CCKBR (ENSODEG00000009617) #22	CAVIN3 (ENSODEG00000008610) #23	SMPD1 (ENSODEG00000009418) #24	APBB1 (ENSODEG00000009364) #25	HPX (ENSODEG00000009007) #26	TRIM3 (ENSODEG00000010111) #27	ARFIP2 (ENSODEG00000008803) #28	TIMM10B (ENSODEG00000010061) #29	DNHD1 (ENSODEG00000009702)	RRP8 (ENSODEG00000011209) #30	ILK (ENSODEG00000010914) #31	TAF10 (ENSODEG00000012140) #32	TPP1 (ENSODEG00000009821) #33	DCHS1 (ENSODEG00000010062) #34	MRPL17 (ENSODEG00000009556) #35	ENSODEG00000009242
Guinea pig	MODERN SPECIES	71	OR56B1 (ENSCPOG00000026597)	ENSCPOG00000040609 ##18	ENSCPOG00000037686	ENSCPOG00000039770 ##18	ENSCPOG00000001364 ##18	OR56A5 (ENSCPOG00000036870)	ENSCPOG00000034113 ##18	OR52L1 (ENSCPOG00000031284)	OR56B4 (ENSCPOG00000010162)	ENSCPOG00000036043	ENSCPOG00000026446	ENSCPOG00000039472 #18	C11orf42 (ENSCPOG00000025622) #19	FHIP1B (ENSCPOG00000007380) #20	CNGA4 (ENSCPOG00000026306) #21	CCKBR (ENSCPOG00000025284) #22	CAVIN3 (ENSCPOG00000032337) #23	SMPD1 (ENSCPOG00000002182) #24	APBB1 (ENSCPOG00000019866) #25	HPX (ENSCPOG00000008947) #26	TRIM3 (ENSCPOG00000001032) #27	ARFIP2 (ENSCPOG00000006254) #28	TIMM10B (ENSCPOG00000034824) #29	DNHD1 (ENSCPOG00000012612)	RRP8 (ENSCPOG00000012515) #30	ILK (ENSCPOG00000012519) #31	TAF10 (ENSCPOG00000012528) #32	TPP1 (ENSCPOG00000012530) #33	DCHS1 (ENSCPOG00000012536) #34	MRPL17 (ENSCPOG00000032658) #35	ENSCPOG00000038419
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000020541	OR52E5 (ENSHGLG00000010640)	ENSHGLG00000038234	ENSHGLG00000036553	ENSHGLG00000021059	ENSHGLG00000021233	ENSHGLG00000021197	ENSHGLG00000021343	ENSHGLG00000021230 ##18	OR56B4 (ENSHGLG00000021275)	OR52B2 (ENSHGLG00000021062)	OR52W1 (ENSHGLG00000015412) #18	C11orf42 (ENSHGLG00000015442) #19	FHIP1B (ENSHGLG00000019367) #20	CNGA4 (ENSHGLG00000012330) #21	CCKBR (ENSHGLG00000004767) #22	CAVIN3 (ENSHGLG00000005382) #23	SMPD1 (ENSHGLG00000009996) #24	APBB1 (ENSHGLG00000010438) #25	HPX (ENSHGLG00000003482) #26	TRIM3 (ENSHGLG00000004231) #27	ARFIP2 (ENSHGLG00000007482) #28	TIMM10B (ENSHGLG00000004159) #29	ENSHGLG00000003314	RRP8 (ENSHGLG00000003980) #30	ILK (ENSHGLG00000043271) #31	TAF10 (ENSHGLG00000044528) #32	TPP1 (ENSHGLG00000003787) #33	DCHS1 (ENSHGLG00000004668) #34	MRPL17 (ENSHGLG00000006859) #35	ENSHGLG00000033422 #36
Rodentia_B	ANCESTRAL SPECIES	39	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT01090000260013.b.a.a.a.a	ENSGT00940000161235.c.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000259995.a.b.t
Myomorpha	ANCESTRAL SPECIES	13	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT01090000260013.b.a.a.a.a	ENSGT00940000161235.c.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Muroidea	ANCESTRAL SPECIES	12	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT01090000260013.b.a.a.a.a	ENSGT00940000161235.c.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Muroidea_A	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT01090000260013.b.a.a.a.a	ENSGT00940000161235.c.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.i #36
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.i #36
Cricetidae_B	ANCESTRAL SPECIES	38	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.i #36
Northern American deer mouse	MODERN SPECIES		Or52e5 (ENSPEMG00000009085)	ENSPEMG00000009154	ENSPEMG00000015213	Or56a5 (ENSPEMG00000014888)	ENSPEMG00000027434	Or56a4 (ENSPEMG00000005422)	ENSPEMG00000027104	Or52x1 (ENSPEMG00000025562) ##18	ENSPEMG00000028849	Or52b1 (ENSPEMG00000001937)	Or52b2 (ENSPEMG00000003832)	Or52w1 (ENSPEMG00000024874) #18	Gm5901 (ENSPEMG00000028535) #19	Fhip1b (ENSPEMG00000016321) #20	Cnga4 (ENSPEMG00000002635) #21	Cckbr (ENSPEMG00000028494) #22	Cavin3 (ENSPEMG00000001842) #23	Smpd1 (ENSPEMG00000011471) #24	Apbb1 (ENSPEMG00000017999) #25	Hpx (ENSPEMG00000013536) #26	Trim3 (ENSPEMG00000018621) #27	Arfip2 (ENSPEMG00000002024) #28	ENSPEMG00000018320 #29	Dnhd1 (ENSPEMG00000016505)	Rrp8 (ENSPEMG00000017257) #30	Ilk (ENSPEMG00000017998) #31	ENSPEMG00000007669 #32	Tpp1 (ENSPEMG00000018870) #33	Dchs1 (ENSPEMG00000010052) #34	Mrpl17 (ENSPEMG00000012735) #35	ENSPEMG00000014624 #36
Prairie vole	MODERN SPECIES	156	Or52d3 (ENSMOCG00000001901)	Or52p1 (ENSMOCG00000001680) ##18	ENSMOCG00000001675	ENSMOCG00000001364 ##18	ENSMOCG00000011458	Or52n5 (ENSMOCG00000001634) ##18	Or52n2b (ENSMOCG00000002085) ##18	ENSMOCG00000002471 ##18	ENSMOCG00000022508	ENSMOCG00000001983	ENSMOCG00000019892	ENSMOCG00000006309	ENSMOCG00000020357	Fhip1b (ENSMOCG00000000194) #20	Cnga4 (ENSMOCG00000017722) #21	Cckbr (ENSMOCG00000016332) #22	Cavin3 (ENSMOCG00000020058) #23	Smpd1 (ENSMOCG00000014626) #24	Apbb1 (ENSMOCG00000016491) #25	Hpx (ENSMOCG00000019138) #26	Trim3 (ENSMOCG00000014561) #27	Arfip2 (ENSMOCG00000013267) #28	Dnhd1 (ENSMOCG00000015718)	Rrp8 (ENSMOCG00000002486) #30	Ilk (ENSMOCG00000019082) #31	Taf10 (ENSMOCG00000011482) #32	Tpp1 (ENSMOCG00000018766) #33	Dchs1 (ENSMOCG00000005765) #34	Mrpl17 (ENSMOCG00000018077) #35
Cricetinae	ANCESTRAL SPECIES	2	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
Golden Hamster	MODERN SPECIES	885						ENSMAUG00000003280	Or52e7 (ENSMAUG00000015232)	Or52e4 (ENSMAUG00000015298)	ENSMAUG00000020299	Or52l1 (ENSMAUG00000002421)	Or52x1 (ENSMAUG00000020381) ##18	Or52b2 (ENSMAUG00000002780)	Gm5901 (ENSMAUG00000019054) #19	Fhip1b (ENSMAUG00000020576) #20	Cnga4 (ENSMAUG00000006254) #21	Cckbr (ENSMAUG00000017780) #22	Cavin3 (ENSMAUG00000010741) #23	Smpd1 (ENSMAUG00000007723) #24	Apbb1 (ENSMAUG00000001261) #25	Hpx (ENSMAUG00000015159) #26	Trim3 (ENSMAUG00000002410) #27	Arfip2 (ENSMAUG00000012245) #28	ENSMAUG00000008495 #29	Dnhd1 (ENSMAUG00000011515)	Rrp8 (ENSMAUG00000000324) #30	Ilk (ENSMAUG00000019863) #31	Taf10 (ENSMAUG00000012796) #32	Tpp1 (ENSMAUG00000005575) #33	Dchs1 (ENSMAUG00000008012) #34
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001024119	ENSCGRG00001004734	ENSCGRG00001024880	Or56a5 (ENSCGRG00001007102)	ENSCGRG00001007550	Or56a4 (ENSCGRG00001012677)	ENSCGRG00001012597	Or52x1 (ENSCGRG00001001121) ##18	ENSCGRG00001003390	Or52b1 (ENSCGRG00001017563)	Or52b2 (ENSCGRG00001001666)	Or52w1 (ENSCGRG00001001861) #18	Gm5901 (ENSCGRG00001000187) #19	Fhip1b (ENSCGRG00001008833) #20	Cnga4 (ENSCGRG00001012542) #21	Cckbr (ENSCGRG00001014745) #22	Cavin3 (ENSCGRG00001012197) #23	Smpd1 (ENSCGRG00001013290) #24	Apbb1 (ENSCGRG00001023039) #25	Hpx (ENSCGRG00001018175) #26	Trim3 (ENSCGRG00001021547) #27	Arfip2 (ENSCGRG00001006756) #28	ENSCGRG00001011475	Dnhd1 (ENSCGRG00001000945)	Rrp8 (ENSCGRG00001003103) #30	Ilk (ENSCGRG00001022853) #31	Taf10 (ENSCGRG00001017301) #32	ENSCGRG00001010929 #33	Dchs1 (ENSCGRG00001013120) #34	ENSCGRG00001018404 #35	ENSCGRG00001019088 #35
Murinae	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.i #36
Mus	ANCESTRAL SPECIES		ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.h.a #36
Mus_A	ANCESTRAL SPECIES	1	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.h.a #36
Mus_B	ANCESTRAL SPECIES		ENSGT00940000155550.a.b.h	ENSGT00940000161235.d	ENSGT00940000155550.a.b.g	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a.m	ENSGT01100000263522.A.d.a.a.n	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.h.a.a #36
Mus_C	ANCESTRAL SPECIES	14	ENSGT01090000260056.a.a.a.a.b	ENSGT00940000155550.a.b.g	ENSGT00940000161235.d	ENSGT00940000161235.c.b	ENSGT00940000161235.c.a	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a.m	ENSGT01100000263522.A.d.a.a.n	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b.i #36
Steppe mouse	MODERN SPECIES	2554								ENSMSIG00000027680	Or56b35 (ENSMSIG00000027683)	Or52b1 (ENSMSIG00000027686)	Or52b2 (ENSMSIG00000027691)	Or52w1 (ENSMSIG00000027693) #18	Gm5901 (ENSMSIG00000027695) #19	Fhip1b (ENSMSIG00000027701) #20	Cnga4 (ENSMSIG00000027737) #21	Cckbr (ENSMSIG00000027749) #22	Cavin3 (ENSMSIG00000027774) #23	Smpd1 (ENSMSIG00000027781) #24	Apbb1 (ENSMSIG00000027795) #25	Hpx (ENSMSIG00000028059) #26	Trim3 (ENSMSIG00000028064) #27	Arfip2 (ENSMSIG00000028074) #28	Timm10b (ENSMSIG00000028100)	Dnhd1 (ENSMSIG00000028126)	Rrp8 (ENSMSIG00000028154) #30	Ilk (ENSMSIG00000028162) #31	Taf10 (ENSMSIG00000028175) #32	Tpp1 (ENSMSIG00000028180) #33	Dchs1 (ENSMSIG00000028190) #34	Mrpl17 (ENSMSIG00000028213) #35	ENSMSIG00000028217 #36
spretus	MODERN SPECIES	16	MGP_SPRETEiJ_G0031324	MGP_SPRETEiJ_G0031325	MGP_SPRETEiJ_G0031326	MGP_SPRETEiJ_G0031327	Or52l1 (MGP_SPRETEiJ_G0031328)	Or52x1 (MGP_SPRETEiJ_G0031329) ##18	MGP_SPRETEiJ_G0031330	MGP_SPRETEiJ_G0031331	MGP_SPRETEiJ_G0031332	Or52b1 (MGP_SPRETEiJ_G0031333)	Or52b2 (MGP_SPRETEiJ_G0031334)	Or52w1 (MGP_SPRETEiJ_G0031335) #18	Fhip1b (MGP_SPRETEiJ_G0031336) #20	Gm5901 (MGP_SPRETEiJ_G0031337) #19	Cnga4 (MGP_SPRETEiJ_G0031338) #21	Cckbr (MGP_SPRETEiJ_G0031339) #22	Cavin3 (MGP_SPRETEiJ_G0031340) #23	Smpd1 (MGP_SPRETEiJ_G0031341) #24	Apbb1 (MGP_SPRETEiJ_G0031342) #25	Hpx (MGP_SPRETEiJ_G0031343) #26	Trim3 (MGP_SPRETEiJ_G0031344) #27	Arfip2 (MGP_SPRETEiJ_G0031345) #28	MGP_SPRETEiJ_G0031346 #29	Dnhd1 (MGP_SPRETEiJ_G0031347)	Rrp8 (MGP_SPRETEiJ_G0031348) #30	Ilk (MGP_SPRETEiJ_G0031349) #31	Taf10 (MGP_SPRETEiJ_G0031350) #32	Tpp1 (MGP_SPRETEiJ_G0031351) #33	Dchs1 (MGP_SPRETEiJ_G0031352) #34	Mrpl17 (MGP_SPRETEiJ_G0031353) #35	Or2ag12 (MGP_SPRETEiJ_G0031354)
Mouse	MODERN SPECIES	16	Or56a41 (ENSMUSG00000041885)	Or56a3b (ENSMUSG00000095248)	Or56a42-ps1 (ENSMUSG00000059768)	Or56a5 (ENSMUSG00000044120)	Or56a4 (ENSMUSG00000047225)	Or52l1 (ENSMUSG00000047794)	Or52x1 (ENSMUSG00000048425) ##18	Or56b34 (ENSMUSG00000073909)	Or56b35 (ENSMUSG00000073907)	Or52b1 (ENSMUSG00000050266)	Or52b2 (ENSMUSG00000043948)	Or52w1 (ENSMUSG00000073906) #18	Fhip1b (ENSMUSG00000044465) #20	Gm5901 (ENSMUSG00000078611) #19	Cnga4 (ENSMUSG00000030897) #21	Cckbr (ENSMUSG00000030898) #22	Cavin3 (ENSMUSG00000037060) #23	Smpd1 (ENSMUSG00000037049) #24	Apbb1 (ENSMUSG00000037032) #25	Hpx (ENSMUSG00000030895) #26	Trim3 (ENSMUSG00000036989) #27	Arfip2 (ENSMUSG00000030881) #28	Timm10b (ENSMUSG00000089847)	Gm45799 (ENSMUSG00000110234)	Dnhd1 (ENSMUSG00000030882)	Rrp8 (ENSMUSG00000030888) #30	Ilk (ENSMUSG00000030890) #31	Taf10 (ENSMUSG00000043866) #32	Tpp1 (ENSMUSG00000030894) #33	Dchs1 (ENSMUSG00000036862) #34	Mrpl17 (ENSMUSG00000030879) #35
Ryukyu mouse	MODERN SPECIES	16	Or52e4 (MGP_CAROLIEiJ_G0030212)	Or52e5 (MGP_CAROLIEiJ_G0030213)	MGP_CAROLIEiJ_G0030214	MGP_CAROLIEiJ_G0030215	MGP_CAROLIEiJ_G0030216	MGP_CAROLIEiJ_G0030218	MGP_CAROLIEiJ_G0030217	Or52l1 (MGP_CAROLIEiJ_G0030219)	Or52x1 (MGP_CAROLIEiJ_G0030220) ##18	Or52b1 (MGP_CAROLIEiJ_G0030221)	Or52b2 (MGP_CAROLIEiJ_G0030222)	Or52w1 (MGP_CAROLIEiJ_G0030223) #18	Fhip1b (MGP_CAROLIEiJ_G0030224) #20	Gm5901 (MGP_CAROLIEiJ_G0030225) #19	Cnga4 (MGP_CAROLIEiJ_G0030226) #21	Cckbr (MGP_CAROLIEiJ_G0030227) #22	Cavin3 (MGP_CAROLIEiJ_G0030228) #23	Smpd1 (MGP_CAROLIEiJ_G0030229) #24	Apbb1 (MGP_CAROLIEiJ_G0030230) #25	Hpx (MGP_CAROLIEiJ_G0030231) #26	Trim3 (MGP_CAROLIEiJ_G0030232) #27	Arfip2 (MGP_CAROLIEiJ_G0030233) #28	MGP_CAROLIEiJ_G0030234 #29	Dnhd1 (MGP_CAROLIEiJ_G0030235)	Rrp8 (MGP_CAROLIEiJ_G0030236) #30	Ilk (MGP_CAROLIEiJ_G0030237) #31	Taf10 (MGP_CAROLIEiJ_G0030238) #32	Tpp1 (MGP_CAROLIEiJ_G0030239) #33	Dchs1 (MGP_CAROLIEiJ_G0030240) #34	Mrpl17 (MGP_CAROLIEiJ_G0030241) #35	Or2ag12 (MGP_CAROLIEiJ_G0030242)
Shrew mouse	MODERN SPECIES		Or52e4 (MGP_PahariEiJ_G0013427)	Or52e5 (MGP_PahariEiJ_G0013428)	MGP_PahariEiJ_G0013429	MGP_PahariEiJ_G0013430	MGP_PahariEiJ_G0013431	MGP_PahariEiJ_G0013433	MGP_PahariEiJ_G0013432	Or52x1 (MGP_PahariEiJ_G0013434) ##18	MGP_PahariEiJ_G0013435	Or52b1 (MGP_PahariEiJ_G0013436)	Or52b2 (MGP_PahariEiJ_G0013437)	Or52w1 (MGP_PahariEiJ_G0013438) #18	Fhip1b (MGP_PahariEiJ_G0013439) #20	Gm5901 (MGP_PahariEiJ_G0013440) #19	Cnga4 (MGP_PahariEiJ_G0013441) #21	Cckbr (MGP_PahariEiJ_G0013442) #22	Cavin3 (MGP_PahariEiJ_G0013443) #23	Smpd1 (MGP_PahariEiJ_G0013444) #24	MGP_PahariEiJ_G0013445 ##25	Hpx (MGP_PahariEiJ_G0013446) #26	Trim3 (MGP_PahariEiJ_G0013447) #27	Arfip2 (MGP_PahariEiJ_G0013448) #28	MGP_PahariEiJ_G0013449 #29	Dnhd1 (MGP_PahariEiJ_G0013450)	Rrp8 (MGP_PahariEiJ_G0013451) #30	Ilk (MGP_PahariEiJ_G0013452) #31	Taf10 (MGP_PahariEiJ_G0013453) #32	Tpp1 (MGP_PahariEiJ_G0013454) #33	Dchs1 (MGP_PahariEiJ_G0013455) #34	Mrpl17 (MGP_PahariEiJ_G0013456) #35	Or2ag12 (MGP_PahariEiJ_G0013457)
Rat	MODERN SPECIES		ENSRNOG00000066831	Or56a5 (ENSRNOG00000017366)	Or56a3b (ENSRNOG00000017357)	Or52l1b (ENSRNOG00000063165)	Or52l1 (ENSRNOG00000062378)	Or52x1 (ENSRNOG00000017379) ##18	Or56b6 (ENSRNOG00000064813)	Or56b6c (ENSRNOG00000065154)	Or56b6b (ENSRNOG00000071019)	Or52b1 (ENSRNOG00000017387)	Or52b2 (ENSRNOG00000025819)	Or52w1 (ENSRNOG00000049480) #18	C1h11orf42 (ENSRNOG00000030818) #19	Fhip1b (ENSRNOG00000017408) #20	Cnga4 (ENSRNOG00000017609) #21	Cckbr (ENSRNOG00000017679) #22	Cavin3 (ENSRNOG00000017914) #23	Smpd1 (ENSRNOG00000017977) #24	Apbb1 (ENSRNOG00000018020) #25	Hpx (ENSRNOG00000018257) #26	Trim3 (ENSRNOG00000018356) #27	Arfip2 (ENSRNOG00000018440) #28	Timm10b (ENSRNOG00000050846) #29	Dnhd1 (ENSRNOG00000051291)	Rrp8 (ENSRNOG00000018766) #30	Ilk (ENSRNOG00000018993) #31	Taf10 (ENSRNOG00000019178) #32	Tpp1 (ENSRNOG00000019212) #33	Dchs1 (ENSRNOG00000031643) #34	Mrpl17 (ENSRNOG00000019497) #35	Gvin1 (ENSRNOG00000045560) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	987				Or52h9 (ENSNGAG00000013415)	ENSNGAG00000004243 ##18	ENSNGAG00000013609	ENSNGAG00000008795	Or52e4 (ENSNGAG00000002380)	ENSNGAG00000009977	Or56a5 (ENSNGAG00000007882)	Or52l1 (ENSNGAG00000005871)	Or52w1 (ENSNGAG00000012823) #18	Gm5901 (ENSNGAG00000018588) #19	Fhip1b (ENSNGAG00000012378) #20	Cnga4 (ENSNGAG00000003770) #21	Cckbr (ENSNGAG00000007686) #22	Cavin3 (ENSNGAG00000017606) #23	ENSNGAG00000021942	Smpd1 (ENSNGAG00000022149) #24	Apbb1 (ENSNGAG00000001715) #25	Hpx (ENSNGAG00000023483) #26	Trim3 (ENSNGAG00000022862) #27	Arfip2 (ENSNGAG00000000906) #28	ENSNGAG00000011653 #29	Dnhd1 (ENSNGAG00000017568)	Rrp8 (ENSNGAG00000012450) #30	Ilk (ENSNGAG00000017643) #31	Taf10 (ENSNGAG00000018833) #32	Tpp1 (ENSNGAG00000000792) #33	Dchs1 (ENSNGAG00000001902) #34	Mrpl17 (ENSNGAG00000012128) #35
Lesser Egyptian jerboa	MODERN SPECIES	43	Ubqln5 (ENSJJAG00000015100)	Olfm5 (ENSJJAG00000023376)	Trim6 (ENSJJAG00000001536)	ENSJJAG00000016123	ENSJJAG00000011165	Or52h7 (ENSJJAG00000018180)	ENSJJAG00000019688	ENSJJAG00000018902 ##18	ENSJJAG00000012376	Or56a4 (ENSJJAG00000011878)	Or52l1 (ENSJJAG00000012438)	Or52b2 (ENSJJAG00000021881)	Gm5901 (ENSJJAG00000019487) #19	Fhip1b (ENSJJAG00000008756) #20	Cnga4 (ENSJJAG00000016710) #21	Cckbr (ENSJJAG00000023339) #22	Cavin3 (ENSJJAG00000022005) #23	Smpd1 (ENSJJAG00000014457) #24	Apbb1 (ENSJJAG00000013460) #25	ENSJJAG00000020266 #26	Trim3 (ENSJJAG00000013162) #27	Arfip2 (ENSJJAG00000001788) #28	ENSJJAG00000016632 #29	ENSJJAG00000023934	ENSJJAG00000020608 #30	Ilk (ENSJJAG00000018897) #31	Taf10 (ENSJJAG00000013323) #32	Tpp1 (ENSJJAG00000020232) #33	Dchs1 (ENSJJAG00000017088) #34	Mrpl17 (ENSJJAG00000022535) #35	ENSJJAG00000013205 #36
Kangaroo rat	MODERN SPECIES	532	Trim6 (ENSDORG00000008938)	ENSDORG00000016526	ENSDORG00000023669	ENSDORG00000025321	Or52u1 (ENSDORG00000027850) ##18	ENSDORG00000025311	ENSDORG00000028411 ##18	Or52e7 (ENSDORG00000028818)	ENSDORG00000023235	Or52l1 (ENSDORG00000002636)	Or52x1 (ENSDORG00000027653) ##18	Or52b2 (ENSDORG00000025681)	Gm5901 (ENSDORG00000013973) #19	Fhip1b (ENSDORG00000013975) #20	Cnga4 (ENSDORG00000013976) #21	Cckbr (ENSDORG00000013978) #22	Cavin3 (ENSDORG00000015182) #23	Smpd1 (ENSDORG00000027927) #24	Apbb1 (ENSDORG00000007507) #25	ENSDORG00000025077 #26	Trim3 (ENSDORG00000010666) #27	Arfip2 (ENSDORG00000010668) #28	ENSDORG00000010671 #29	ENSDORG00000029797	Rrp8 (ENSDORG00000000103) #30	Ilk (ENSDORG00000000519) #31	Taf10 (ENSDORG00000000520) #32	Tpp1 (ENSDORG00000000521) #33	Dchs1 (ENSDORG00000000524) #34	Mrpl17 (ENSDORG00000026555) #35
Lagomorpha	ANCESTRAL SPECIES	55	ENSGT01100000263522.A.d.b	ENSGT01100000263528.D.c.a.b ##18	ENSGT01100000263528.D.c.a.a ##18	ENSGT01100000263528.D.d.a.a ##18	ENSGT01090000260056.a.a.a.a.a.b.a	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT00940000155550.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000163046	ENSGT00940000161235	ENSGT01100000263522.A.d.a.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Rabbit	MODERN SPECIES		ENSOCUG00000039016 ##18	OR52N1 (ENSOCUG00000002488) ##18	OR52N2 (ENSOCUG00000009059) ##18	ENSOCUG00000002097	ENSOCUG00000021205	OR56A3 (ENSOCUG00000006178)	OR52E5 (ENSOCUG00000010873)	ENSOCUG00000036314	OR56A1 (ENSOCUG00000001495)	OR56A4 (ENSOCUG00000006619)	OR56B4 (ENSOCUG00000011965)	FHIP1B (ENSOCUG00000007791) #20	OR52W1 (ENSOCUG00000024068) #18	C11orf42 (ENSOCUG00000017869) #19	CNGA4 (ENSOCUG00000010010) #21	CCKBR (ENSOCUG00000007797) #22	ENSOCUG00000039447	ENSOCUG00000037294	CAVIN3 (ENSOCUG00000007808) #23	SMPD1 (ENSOCUG00000015737) #24	APBB1 (ENSOCUG00000016929) #25	TRIM3 (ENSOCUG00000016940) #27	ARFIP2 (ENSOCUG00000016950) #28	TIMM10B (ENSOCUG00000016956) #29	DNHD1 (ENSOCUG00000016970)	RRP8 (ENSOCUG00000027619) #30	ILK (ENSOCUG00000006593) #31	TAF10 (ENSOCUG00000006599) #32	TPP1 (ENSOCUG00000006604) #33	DCHS1 (ENSOCUG00000006606) #34	ENSOCUG00000033973
Pika	MODERN SPECIES	3601												OR52W1 (ENSOPRG00000007779) #18	C11orf42 (ENSOPRG00000007789) #19	FHIP1B (ENSOPRG00000007800) #20	CNGA4 (ENSOPRG00000007827) #21	CCKBR (ENSOPRG00000007837) #22	CAVIN3 (ENSOPRG00000007851) #23	SMPD1 (ENSOPRG00000007856) #24	APBB1 (ENSOPRG00000007891) #25	HPX (ENSOPRG00000007923) #26	TRIM3 (ENSOPRG00000007943) #27	ARFIP2 (ENSOPRG00000007962) #28	TIMM10B (ENSOPRG00000007976) #29	ENSOPRG00000007979	ENSOPRG00000008005	RRP8 (ENSOPRG00000008052) #30	ILK (ENSOPRG00000008059) #31	TAF10 (ENSOPRG00000008076) #32	TPP1 (ENSOPRG00000008091) #33	DCHS1 (ENSOPRG00000008111) #34	MRPL17 (ENSOPRG00000008141) #35
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.b	ENSGT00940000155550.a.b	ENSGT00940000155550.a.a.b	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT00940000162834	ENSGT00940000161235	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.b ##37
Afrotheria	ANCESTRAL SPECIES	25										ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
Afrotheria_a	ANCESTRAL SPECIES	24										ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b #37
Elephant	MODERN SPECIES	209									ENSLAFG00000009583	ENSLAFG00000006006	OR52B2 (ENSLAFG00000031446)	OR52W1 (ENSLAFG00000017724) #18	C11orf42 (ENSLAFG00000006011) #19	FHIP1B (ENSLAFG00000031716) #20	CNGA4 (ENSLAFG00000028939) #21	CCKBR (ENSLAFG00000013975) #22	CAVIN3 (ENSLAFG00000010992) #23	SMPD1 (ENSLAFG00000006393) #24	APBB1 (ENSLAFG00000027099) #25	HPX (ENSLAFG00000013977) #26	TRIM3 (ENSLAFG00000013983) #27	ARFIP2 (ENSLAFG00000015380) #28	TIMM10B (ENSLAFG00000030768) #29	ENSLAFG00000015385	ENSLAFG00000014318	RRP8 (ENSLAFG00000000112) #30	ILK (ENSLAFG00000014337) #31	ENSLAFG00000029330 #32	TPP1 (ENSLAFG00000031815) #33	ENSLAFG00000016034 #34	MRPL17 (ENSLAFG00000004834) #35
Hyrax	MODERN SPECIES	8913																CCKBR (ENSPCAG00000004283) #22
Tenrec	MODERN SPECIES	16805																CCKBR (ENSETEG00000015017) #22
Xenarthra	ANCESTRAL SPECIES	64								ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT01090000260024.A.a.a.b.b.b.a.a.b ##37	ENSGT01090000259995.a.b
Armadillo	MODERN SPECIES	2369	ENSDNOG00000019686	OR56A5 (ENSDNOG00000043547)	OR56A1 (ENSDNOG00000035832)	ENSDNOG00000039541	ENSDNOG00000001876	ENSDNOG00000049144	ENSDNOG00000043751	ENSDNOG00000049345	ENSDNOG00000047797	ENSDNOG00000038363	OR52B2 (ENSDNOG00000049097)	OR52W1 (ENSDNOG00000019134) #18	C11orf42 (ENSDNOG00000007031) #19	FHIP1B (ENSDNOG00000007039) #20	CNGA4 (ENSDNOG00000040646) #21	CCKBR (ENSDNOG00000034446) #22	CAVIN3 (ENSDNOG00000038777) #23	SMPD1 (ENSDNOG00000048070) #24	APBB1 (ENSDNOG00000036259) #25	ENSDNOG00000035829 #26	TRIM3 (ENSDNOG00000043326) #27	ARFIP2 (ENSDNOG00000042190) #28	TIMM10B (ENSDNOG00000045957) #29	DNHD1 (ENSDNOG00000038835)	RRP8 (ENSDNOG00000000812) #30	ILK (ENSDNOG00000000813) #31	ENSDNOG00000000814 #32	TPP1 (ENSDNOG00000000820) #33	DCHS1 (ENSDNOG00000047878) #34	ENSDNOG00000037357	ENSDNOG00000033243
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00940000155550.b.a	ENSGT00940000155550.a.c.b	ENSGT00940000155550.b.b	ENSGT00940000155550.a.c.a	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Opossum	MODERN SPECIES	3	NTF4 (ENSMODG00000013772)	KCNA7 (ENSMODG00000037394)	ENSMODG00000023381	PPFIA3 (ENSMODG00000013817)	ENSMODG00000013840	ENSMODG00000013845	ENSMODG00000044736	ENSMODG00000045834	ENSMODG00000037133	ENSMODG00000014103	ENSMODG00000019960	OR52W1 (ENSMODG00000023358) #18	C11orf42 (ENSMODG00000018594) #19	FHIP1B (ENSMODG00000018593) #20	CNGA4 (ENSMODG00000018592) #21	CCKBR (ENSMODG00000049350) #22	CAVIN3 (ENSMODG00000018588) #23	SMPD1 (ENSMODG00000018587) #24	APBB1 (ENSMODG00000018585) #25	HPX (ENSMODG00000018583) #26	TRIM3 (ENSMODG00000018582) #27	ARFIP2 (ENSMODG00000049250) #28	TIMM10B (ENSMODG00000018578) #29	ENSMODG00000018574	ENSMODG00000051595 #30	ILK (ENSMODG00000018570) #31	TAF10 (ENSMODG00000018568) #32	TPP1 (ENSMODG00000018566) #33	DCHS1 (ENSMODG00000018475) #34	MRPL17 (ENSMODG00000018267) #35	ENSMODG00000045816 #36
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000155550.b.a	ENSGT00940000155550.a.c.b	ENSGT00940000155550.b.b	ENSGT00940000155550.a.c.a	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.b	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.a.a.a.a.b	ENSGT00940000155550.b.a	ENSGT00940000155550.a.c.a	ENSGT00940000161235	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a	ENSGT01100000263528.A.a.b ##18	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00940000154393.h.b #36
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT01090000260056.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.a.a.a.b	ENSGT01090000260056.a.a.a.a.a.a.a.a.b	ENSGT00940000155550.b.a	ENSGT00940000155550.a.c.a	ENSGT00940000163046	ENSGT01090000260013.b.a.a.a.a.lb	ENSGT00940000161235	ENSGT01090000260013.b.a.a.a.a.mb	ENSGT01100000263522.A.d.a.a	ENSGT01090000260043.a.a.a.b.a.b.a	ENSGT01100000263528.A.a.a #18	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000182910.a.a.b #23	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000161822 #34	ENSGT00390000010698 #35	ENSGT00960000186612.B.a.b.d.a.b
koala	MODERN SPECIES	279	ENSPCIG00000008705	ENSPCIG00000008704	ENSPCIG00000035627	ENSPCIG00000037241	ENSPCIG00000035288	OR56A1 (ENSPCIG00000032164)	ENSPCIG00000031047	ENSPCIG00000033044	OR56B4 (ENSPCIG00000031077)	ENSPCIG00000032030	ENSPCIG00000032790	OR52W1 (ENSPCIG00000010821) #18	C11orf42 (ENSPCIG00000010818) #19	FHIP1B (ENSPCIG00000010816) #20	CNGA4 (ENSPCIG00000010814) #21	CCKBR (ENSPCIG00000010813) #22	CAVIN3 (ENSPCIG00000010812) #23	SMPD1 (ENSPCIG00000022940) #24	APBB1 (ENSPCIG00000022934) #25	HPX (ENSPCIG00000022928) #26	TRIM3 (ENSPCIG00000010809) #27	ARFIP2 (ENSPCIG00000010805) #28	TIMM10B (ENSPCIG00000010803) #29	ENSPCIG00000010799	ENSPCIG00000037345 #30	ILK (ENSPCIG00000026497) #31	TAF10 (ENSPCIG00000026496) #32	TPP1 (ENSPCIG00000026275) #33	DCHS1 (ENSPCIG00000026260) #34	MRPL17 (ENSPCIG00000010796) #35	ENSPCIG00000037315
Common wonbat	MODERN SPECIES	1014												OR52W1 (ENSVURG00010005063) #18	C11orf42 (ENSVURG00010005052) #19	FHIP1B (ENSVURG00010005030) #20	CNGA4 (ENSVURG00010005012) #21	CCKBR (ENSVURG00010004966) #22	CAVIN3 (ENSVURG00010004961) #23	SMPD1 (ENSVURG00010004955) #24	APBB1 (ENSVURG00010004933) #25	HPX (ENSVURG00010004915) #26	TRIM3 (ENSVURG00010004890) #27	ARFIP2 (ENSVURG00010004862) #28	TIMM10B (ENSVURG00010004849) #29	ENSVURG00010004771	ENSVURG00010004751 #30	ENSVURG00010004747	ILK (ENSVURG00010004730) #31	ENSVURG00010004708 #32	TPP1 (ENSVURG00010004695) #33	DCHS1 (ENSVURG00010004668) #34	ENSVURG00010004649 #35
Wallaby	MODERN SPECIES	7954															ENSMEUG00000006069 #21	CCKBR (ENSMEUG00000006084) #22	CAVIN3 (ENSMEUG00000006093) #23
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000031668	ENSSHAG00000024505	ENSSHAG00000031100	ENSSHAG00000031321	ENSSHAG00000021634	ENSSHAG00000021569	ENSSHAG00000023753	ENSSHAG00000030247	OR56B4 (ENSSHAG00000002946)	ENSSHAG00000000498	OR52B2 (ENSSHAG00000001566)	OR52W1 (ENSSHAG00000022889) #18	C11orf42 (ENSSHAG00000002302) #19	FHIP1B (ENSSHAG00000002297) #20	CNGA4 (ENSSHAG00000003210) #21	CCKBR (ENSSHAG00000024082) #22	APBB1 (ENSSHAG00000006156) #25	CAVIN3 (ENSSHAG00000004717) #23	SMPD1 (ENSSHAG00000006065) #24	HPX (ENSSHAG00000006895) #26	TRIM3 (ENSSHAG00000007461) #27	ARFIP2 (ENSSHAG00000026897) #28	TIMM10B (ENSSHAG00000025286) #29	ENSSHAG00000008256	RRP8 (ENSSHAG00000009273) #30	ILK (ENSSHAG00000009423) #31	TPP1 (ENSSHAG00000009541) #33	DCHS1 (ENSSHAG00000009598) #34	ENSSHAG00000024336 #35	ENSSHAG00000029817 #36	ENSSHAG00000023923 #36
Platypus	MODERN SPECIES	11	ENSOANG00000039554	ENSOANG00000044603	ENSOANG00000037442	ENSOANG00000049927	ENSOANG00000021550 ##18	ENSOANG00000038500 ##18	ENSOANG00000042271 ##18	ENSOANG00000010522	ENSOANG00000037747	OR56A3 (ENSOANG00000040059)	ENSOANG00000046652	ENSOANG00000047830	ENSOANG00000047353	ENSOANG00000047857 #19	CNGA4 (ENSOANG00000011914) #21	ENSOANG00000051173 #22	CAVIN3 (ENSOANG00000043123) #23	SMPD1 (ENSOANG00000004577) #24	APBB1 (ENSOANG00000040211) #25	HPX (ENSOANG00000013529) #26	TRIM3 (ENSOANG00000001409) #27	ARFIP2 (ENSOANG00000038976) #28	ENSOANG00000015283 #29	ENSOANG00000049009	ENSOANG00000036043	RRP8 (ENSOANG00000044206) #30	ILK (ENSOANG00000038952) #31	TAF10 (ENSOANG00000037636) #32	TPP1 (ENSOANG00000040337) #33	DCHS1 (ENSOANG00000041834) #34	MRPL17 (ENSOANG00000043700) #35
Sauria	ANCESTRAL SPECIES	44	ENSGT00950000183078.b.a.a	ENSGT00390000013075.a	ENSGT00940000169757	ENSGT00940000160721	ENSGT00550000074799	ENSGT01060000250461	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Lepidosauria	ANCESTRAL SPECIES	57	ENSGT01100000263528.A.b.b ##18	ENSGT01100000263528.A.b.a ##18	ENSGT01100000263522.A.c.b.c.a	ENSGT01100000263490.D.a.a	ENSGT01090000259999.F	ENSGT01090000260043.a.a.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000156437.j.b.a	ENSGT00940000162603	ENSGT00390000010849	ENSGT00940000157809	ENSGT00960000189084	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Episquamata	ANCESTRAL SPECIES	2	ENSGT00910000144246	ENSGT01100000263522.B.d	ENSGT00390000002732.n	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000156437.j.b.a.b	ENSGT00940000162603	ENSGT00940000156437.j.b.a.a	ENSGT00940000156437.j.a	ENSGT00390000010849	ENSGT00940000157809.d	ENSGT00960000189084	ENSGT00940000157809.c	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00940000155128.a.a.b	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Laterata	ANCESTRAL SPECIES	63		ENSGT00940000157809.c.b	ENSGT00960000189084	ENSGT00940000157809.c.a	ENSGT00940000156437.j.a	ENSGT00940000156437.j.b.a.a	ENSGT00940000162603	ENSGT00940000156437.j.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00980000198666	ENSGT00940000155116.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00940000155128.a.a.b	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000006171 #20	ENSPMRG00000006153	CNGA4 (ENSPMRG00000002534) #21	ENSPMRG00000002526	ENSPMRG00000002522	ENSPMRG00000002520	ENSPMRG00000002519	ENSPMRG00000002512	ENSPMRG00000002509	ENSPMRG00000002499	ENSPMRG00000002492	ENSPMRG00000002485	ENSPMRG00000002478	ENSPMRG00000002477	ENSPMRG00000002475	CCKBR (ENSPMRG00000002458) #22	SMPD1 (ENSPMRG00000002450) #24	APBB1 (ENSPMRG00000002441) #25	ENSPMRG00000002435	HPX (ENSPMRG00000002423) #26	TRIM3 (ENSPMRG00000002411) #27	ENSPMRG00000002399	ARFIP2 (ENSPMRG00000002359) #28	TIMM10B (ENSPMRG00000002335) #29	ENSPMRG00000002324	ENSPMRG00000002320	ENSPMRG00000002315	ENSPMRG00000002295	ILK (ENSPMRG00000002281) #31	TAF10 (ENSPMRG00000002278) #32	TPP1 (ENSPMRG00000002273) #33
Argentine black and white tegu	MODERN SPECIES	159											ENSSMRG00000002970	ENSSMRG00000002981	C11orf42 (ENSSMRG00000002986) #19	FHIP1B (ENSSMRG00000002989) #20	CNGA4 (ENSSMRG00000002995) #21	CCKBR (ENSSMRG00000003013) #22	SMPD1 (ENSSMRG00000003019) #24	APBB1 (ENSSMRG00000003032) #25	HPX (ENSSMRG00000003036) #26	TRIM3 (ENSSMRG00000003050) #27	ARFIP2 (ENSSMRG00000003066) #28	ENSSMRG00000003083 #29	ENSSMRG00000003086	ENSSMRG00000003089	ENSSMRG00000003099	ENSSMRG00000003103	ENSSMRG00000003104 #30	ENSSMRG00000003107 #30	ILK (ENSSMRG00000003110) #31	TAF10 (ENSSMRG00000003111) #32	TPP1 (ENSSMRG00000003113) #33
Toxicofera	ANCESTRAL SPECIES	39	ENSGT00940000165269	ENSGT00910000144246	ENSGT01100000263522.B.c	ENSGT00390000002732.n	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000156437.j.b.a.b	ENSGT00940000156437.j.a	ENSGT00940000157809.c	ENSGT00390000010849	ENSGT00940000157809.d	ENSGT00960000189084	ENSGT00940000155116.a.t	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00940000155128.a.a.b	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b
Elapidae	ANCESTRAL SPECIES	37	ENSGT01100000263490.D.a.a	ENSGT00390000002732.n	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000156437.j.b.a.b	ENSGT00940000156437.j.b.a.a	ENSGT00940000156437.j.a	ENSGT00940000157809.c	ENSGT00390000010849	ENSGT00940000157809.d	ENSGT00960000189084.f	ENSGT01090000259999.C.k.a	ENSGT00940000155116.a.t	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00940000155128.a.a.b	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Elapidae_a	ANCESTRAL SPECIES	87	ENSGT01100000263490.D.a.a	ENSGT00390000002732.n	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000156437.j.b.a.b	ENSGT00940000156437.j.b.a.a	ENSGT00940000156437.j.a	ENSGT00940000157809.c	ENSGT00390000010849	ENSGT00940000157809.d	ENSGT01090000260056	ENSGT00940000155717.d	ENSGT00940000155116.a.t	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00940000155128.a.a.b	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Acanthophiinae	ANCESTRAL SPECIES	83	ENSGT01100000263522.A.c.b.d	ENSGT00390000002732.n	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000156437.j.b.a.b	ENSGT00940000156437.j.a	ENSGT00390000010849	ENSGT00940000157809.c	ENSGT00960000189084.e	ENSGT00940000157809.d	ENSGT01090000260056	ENSGT00940000155717.d	ENSGT00940000155116.a.t	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00940000155128.a.a.b	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Mainland tiger snake	MODERN SPECIES	414										ENSNSUG00000007151	ENSNSUG00000007152	ENSNSUG00000007153	C11orf42 (ENSNSUG00000007154) #19	FHIP1B (ENSNSUG00000007156) #20	CNGA4 (ENSNSUG00000007157) #21	CCKBR (ENSNSUG00000007158) #22	SMPD1 (ENSNSUG00000007162) #24	APBB1 (ENSNSUG00000007165) #25	HPX (ENSNSUG00000007172) #26	TRIM3 (ENSNSUG00000007175) #27	ENSNSUG00000007178	ARFIP2 (ENSNSUG00000007183) #28	TIMM10B (ENSNSUG00000007185) #29	ENSNSUG00000007190	ENSNSUG00000007194	RRP8 (ENSNSUG00000007245) #30	ILK (ENSNSUG00000007246) #31	TAF10 (ENSNSUG00000007247) #32	TPP1 (ENSNSUG00000007248) #33	ENSNSUG00000007251	LCMT2 (ENSNSUG00000007259)
Eastern brown snake	MODERN SPECIES	176	RRM1 (ENSPTXG00000011494)	ENSPTXG00000011500	ENSPTXG00000011504	ENSPTXG00000011507	RPS11 (ENSPTXG00000011510)	ENSPTXG00000011515	ENSPTXG00000011517	ENSPTXG00000011520	ENSPTXG00000011536	ENSPTXG00000011537	ENSPTXG00000011538	ENSPTXG00000011539	ENSPTXG00000011541	CDCA8 (ENSPTXG00000011543)	ENSPTXG00000011545	CCKBR (ENSPTXG00000011564) #22	ENSPTXG00000011566	CNGA4 (ENSPTXG00000011567) #21	ENSPTXG00000011568 #24	ENSPTXG00000011569	ENSPTXG00000011570 #26	ENSPTXG00000011571 #26	TRIM3 (ENSPTXG00000011572) #27	ARFIP2 (ENSPTXG00000011573) #28	ENSPTXG00000011575 #29	ENSPTXG00000011576	ENSPTXG00000011577	RRP8 (ENSPTXG00000011578) #30	ILK (ENSPTXG00000011580) #31	TPP1 (ENSPTXG00000011581) #33	ENSPTXG00000011582
Blue-lipped sea krait	MODERN SPECIES	5317																CCKBR (ENSLLTG00000007829) #22
Indian cobra	MODERN SPECIES	4	ENSNNAG00000013957	ENSNNAG00000013971	ENSNNAG00000013986	ENSNNAG00000014055	ENSNNAG00000014079	ENSNNAG00000014089	ENSNNAG00000014097	ENSNNAG00000014126	ENSNNAG00000014175	ENSNNAG00000014189	ENSNNAG00000014200	ENSNNAG00000014218	C11orf42 (ENSNNAG00000014237) #19	ENSNNAG00000014284 #20	CNGA4 (ENSNNAG00000014292) #21	CCKBR (ENSNNAG00000014310) #22	SMPD1 (ENSNNAG00000007593) #24	ENSNNAG00000007625 #25	ENSNNAG00000007643 #25	HPX (ENSNNAG00000007683) #26	TRIM3 (ENSNNAG00000007745) #27	ARFIP2 (ENSNNAG00000007774) #28	TIMM10B (ENSNNAG00000007814) #29	ENSNNAG00000007844	RRP8 (ENSNNAG00000007872) #30	ILK (ENSNNAG00000007912) #31	TAF10 (ENSNNAG00000007958) #32	TPP1 (ENSNNAG00000007995) #33	ENSNNAG00000008113	LCMT2 (ENSNNAG00000008289)	PGM2L1 (ENSNNAG00000008416)
Lizard	DUPLICATION
Lizard	MODERN SPECIES	465																ENSACAG00000041306 #22
Lizard	MODERN SPECIES	458																ENSACAG00000025606 #22
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000169757	ENSGT01060000248588.b	ENSGT00940000160721	ENSGT00550000074799	ENSGT01060000250461	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.a	ENSGT00940000155116.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT01000000216338	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Archosauria	ANCESTRAL SPECIES	2	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00940000160721	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.b.b	ENSGT01100000263528.A.b.b ##18	ENSGT01100000263522.A.c.b.c.a	ENSGT00940000155116.a	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Aves	ANCESTRAL SPECIES	60							ENSGT00960000189084	ENSGT00940000157809.f	ENSGT00390000010849.b	ENSGT00940000157809.e.a	ENSGT00390000010849.a	ENSGT00940000157809.e.b	ENSGT00940000155116.a	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT01040000244793	ENSGT00940000163671.b	ENSGT00940000162599
Neognathae	ANCESTRAL SPECIES	1	ENSGT01090000260013.b.b	ENSGT01100000263528.A.b.b ##18	ENSGT01100000263528.A.b.a ##18	ENSGT01100000263490.C.a	ENSGT01100000263490.D.a.a	ENSGT01090000259999.F	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00940000155116.a	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.b.b	ENSGT01090000260013.b.a.a.a.b	ENSGT01100000263490.A.a.a.a	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Phasianidae	ANCESTRAL SPECIES		ENSGT01090000260013.b.a.a.a.b	ENSGT00960000189084.h	ENSGT00940000157809.e.b	ENSGT00390000010849.b	ENSGT00940000157809.e.a.a.b	ENSGT00390000010849.a.e.b	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Phasianidae_b	ANCESTRAL SPECIES	45			ENSGT01100000263554.A.a	ENSGT00390000010849.a.e.b	ENSGT00390000010849.b	ENSGT00940000157809.e.a.a.b	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Turkey	MODERN SPECIES		ENSMGAG00000017212	OR51E2 (ENSMGAG00000010773)	ENSMGAG00000016220	ENSMGAG00000014964	ENSMGAG00000021241	ENSMGAG00000014945	ENSMGAG00000014944	ENSMGAG00000014946	ENSMGAG00000019891	ENSMGAG00000015285	ENSMGAG00000015283	ENSMGAG00000021488	ENSMGAG00000015319	ENSMGAG00000009652	CNGA4 (ENSMGAG00000019671) #21	CCKBR (ENSMGAG00000007144) #22	ARFIP2 (ENSMGAG00000015281) #28	ENSMGAG00000015279	ENSMGAG00000015217	ENSMGAG00000017364	ENSMGAG00000015216	ENSMGAG00000015218	ENSMGAG00000015220	ENSMGAG00000020786	ENSMGAG00000015221	ENSMGAG00000015222	ENSMGAG00000015223	ENSMGAG00000016476	ENSMGAG00000018715	ENSMGAG00000015226	ENSMGAG00000021781
Chicken	MODERN SPECIES		OR52R1 (ENSGALG00010003544)	OR51M1 (ENSGALG00010003349)	HBBA (ENSGALG00010003868)	ENSGALG00010003371	ENSGALG00010003379	HBE1 (ENSGALG00010003363)	ENSGALG00010003389	FOLR1 (ENSGALG00010003415)	ENSGALG00010003450	OR52B2L (ENSGALG00010003487)	ENSGALG00010003494	ENSGALG00010003499	RPS11 (ENSGALG00010001654)	FHIP1B (ENSGALG00010001551) #20	CNGA4 (ENSGALG00010001553) #21	CCKBR (ENSGALG00010001558) #22	SMPD1 (ENSGALG00010001570) #24	APBB1 (ENSGALG00010001605) #25	HPX (ENSGALG00010001612) #26	TRIM3 (ENSGALG00010001617) #27	ARFIP2 (ENSGALG00010001627) #28	TIMM10B (ENSGALG00010001635) #29	ENSGALG00010001674	ILK (ENSGALG00010001689) #31	TAF10 (ENSGALG00010001697) #32	TPP1 (ENSGALG00010003814) #33	ENSGALG00010001704	LCMT2 (ENSGALG00010001710)	ENSGALG00010001715
Japanese quail	MODERN SPECIES		ENSCJPG00005005657	ENSCJPG00005005655	ENSCJPG00005005654 ##18	ENSCJPG00005005652	ENSCJPG00005005650	ENSCJPG00005005649	ENSCJPG00005005510	ENSCJPG00005005507	ENSCJPG00005005504	ENSCJPG00005005502	ENSCJPG00005005500	ENSCJPG00005005498	RPS11 (ENSCJPG00005005488)	FHIP1B (ENSCJPG00005005483) #20	CNGA4 (ENSCJPG00005005481) #21	CCKBR (ENSCJPG00005005479) #22	SMPD1 (ENSCJPG00005005471) #24	APBB1 (ENSCJPG00005005399) #25	HPX (ENSCJPG00005005397) #26	ARFIP2 (ENSCJPG00005005388) #28	TIMM10B (ENSCJPG00005005386) #29	ENSCJPG00005005381	RRP8 (ENSCJPG00005005367) #30	ILK (ENSCJPG00005005363) #31	TPP1 (ENSCJPG00005005361) #33	ENSCJPG00005005359	LCMT2 (ENSCJPG00005005357)	ENSCJPG00005005355	ENSCJPG00005005353	LRRC51 (ENSCJPG00005005345)	NUMA1 (ENSCJPG00005005322)
Anatidae	ANCESTRAL SPECIES	56	ENSGT01090000259999.F	ENSGT01100000263490.D.a.a	ENSGT01090000260013.b.a.a.a.b	ENSGT00940000157809.e.b	ENSGT00960000189084.g	ENSGT00940000157809.f.a	ENSGT00390000010849.b	ENSGT00940000157809.e.a.a.a	ENSGT01100000263490.A.a.a.a	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT00940000155116.a	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b.f	ENSGT00940000162599
Pink-footed goose	MODERN SPECIES	278	ENSABRG00000012322	ENSABRG00000012324	ENSABRG00000012330	ENSABRG00000012338	ENSABRG00000012341	ENSABRG00000012346	ENSABRG00000012354	ENSABRG00000012390	ENSABRG00000012400	ENSABRG00000012407	ENSABRG00000012410	RPS11 (ENSABRG00000000727)	ENSABRG00000000791	FHIP1B (ENSABRG00000000820) #20	CNGA4 (ENSABRG00000000926) #21	CCKBR (ENSABRG00000000945) #22	APBB1 (ENSABRG00000001000) #25	HPX (ENSABRG00000001101) #26	TRIM3 (ENSABRG00000001142) #27	ARFIP2 (ENSABRG00000001173) #28	TIMM10B (ENSABRG00000001192) #29	ENSABRG00000001223	ILK (ENSABRG00000001278) #31	TAF10 (ENSABRG00000001328) #32	TPP1 (ENSABRG00000001354) #33	ENSABRG00000001391	LCMT2 (ENSABRG00000001414)	ENSABRG00000001440
Duck	MODERN SPECIES		ENSAPLG00000000832	OR51E2 (ENSAPLG00000000823)	OR52R1 (ENSAPLG00000000781)	ENSAPLG00000022038	ENSAPLG00000022404	ENSAPLG00000023947	ENSAPLG00000001553	ENSAPLG00000002208	ENSAPLG00000003503	ENSAPLG00000015040	ENSAPLG00000011624	RPS11 (ENSAPLG00000010997)	ENSAPLG00000023002	FHIP1B (ENSAPLG00000006910) #20	SMPD1 (ENSAPLG00000030260) #24	CCKBR (ENSAPLG00000006606) #22	APBB1 (ENSAPLG00000021238) #25	HPX (ENSAPLG00000028385) #26	TIMM10B (ENSAPLG00000025254) #29	ENSAPLG00000009463	ENSAPLG00000020105	ENSAPLG00000024979	ENSAPLG00000029753	ENSAPLG00000029556	ENSAPLG00000024523	ENSAPLG00000010069
Neognathae_b	ANCESTRAL SPECIES	38	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT01100000263490.D.a.a	ENSGT00960000189084.j	ENSGT00940000157809.f.b.a.b	ENSGT00940000157809.f.b.a.a	ENSGT00960000189084.i	ENSGT00940000157809.f.a	ENSGT00390000010849.b.b	ENSGT00950000183144.A.c	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00390000009178 #26	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Golden eagle	MODERN SPECIES	10	ENSACCG00020010520	ENSACCG00020010578	ENSACCG00020010594	ENSACCG00020010609	ENSACCG00020010616	ENSACCG00020010627	ENSACCG00020010635	ENSACCG00020010643	OR51Q1 (ENSACCG00020010649)	ENSACCG00020010657	ENSACCG00020010662	ENSACCG00020010672	RPS11 (ENSACCG00020010680)	FHIP1B (ENSACCG00020010699) #20	CNGA4 (ENSACCG00020010709) #21	CCKBR (ENSACCG00020010725) #22	SMPD1 (ENSACCG00020010734) #24	APBB1 (ENSACCG00020010749) #25	HPX (ENSACCG00020010777) #26	TRIM3 (ENSACCG00020010804) #27	ARFIP2 (ENSACCG00020010820) #28	ENSACCG00020010833 #29	ENSACCG00020010860	ILK (ENSACCG00020010887) #31	TAF10 (ENSACCG00020010904) #32	TPP1 (ENSACCG00020010919) #33	ENSACCG00020010926	ENSACCG00020010940	LCMT2 (ENSACCG00020010957)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000016499	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d	ENSGT00950000183144.A.c	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Great tit	MODERN SPECIES		ENSPMJG00000000891	NUP98 (ENSPMJG00000000924)	ENSPMJG00000005448	ENSPMJG00000005449	ENSPMJG00000005450	ENSPMJG00000005451	ENSPMJG00000005452	ENSPMJG00000005478	ENSPMJG00000005479	ENSPMJG00000005480	ENSPMJG00000005482	ENSPMJG00000005486	RPS11 (ENSPMJG00000005488)	FHIP1B (ENSPMJG00000005493) #20	CNGA4 (ENSPMJG00000005623) #21	CCKBR (ENSPMJG00000005649) #22	SMPD1 (ENSPMJG00000005650) #24	APBB1 (ENSPMJG00000005651) #25	TRIM3 (ENSPMJG00000005653) #27	ARFIP2 (ENSPMJG00000005656) #28	ENSPMJG00000005658 #29	ENSPMJG00000005659	ENSPMJG00000005669	ENSPMJG00000005672 #30	ENSPMJG00000005677 #30	ILK (ENSPMJG00000005678) #31	TAF10 (ENSPMJG00000005681) #32	TPP1 (ENSPMJG00000005682) #33	ENSPMJG00000005689	LCMT2 (ENSPMJG00000005703)	LRP6 (ENSPMJG00000005745)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000161651	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799.b	ENSGT00550000074799.a	ENSGT00940000160721	ENSGT00950000183144.A.c	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Flycatcher	MODERN SPECIES		IFNAR1 (ENSFALG00000011897)	ENSFALG00000028738	RRM1 (ENSFALG00000010231)	STIM1 (ENSFALG00000010216)	ENSFALG00000010208	ENSFALG00000010169	ENSFALG00000023801	ENSFALG00000010152	ENSFALG00000010148	ENSFALG00000024788	ENSFALG00000028820	ENSFALG00000024983	ENSFALG00000026135	ENSFALG00000008071	ENSFALG00000008084	CCKBR (ENSFALG00000008124) #22	ENSFALG00000028863	ENSFALG00000026748 #20	ENSFALG00000022940 #25	ENSFALG00000028757	ENSFALG00000027466	TRIM3 (ENSFALG00000008157) #27	ARFIP2 (ENSFALG00000008168) #28	ENSFALG00000028777 #29	ENSFALG00000026258	ENSFALG00000008171	TAF10 (ENSFALG00000027096) #32	ILK (ENSFALG00000008183) #31	ENSFALG00000028061	ENSFALG00000008231
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00510000049322	ENSGT00940000161651	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799.b	ENSGT00550000074799.a	ENSGT00940000160721	ENSGT00950000183144.A.c	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000164975	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799.b	ENSGT00550000074799.a	ENSGT00940000160721	ENSGT01090000259999.F	ENSGT01100000263490.D.a.a	ENSGT00940000157809.e.a.b	ENSGT00390000010849.b.a.a	ENSGT00950000183144.A.c	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000164975	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT00940000158173 #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b	ENSGT00940000162599
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES		ENSTGUG00000020222	ENSTGUG00000020485	ENSTGUG00000026720	ENSTGUG00000027415	ENSTGUG00000023257	ENSTGUG00000023804	ENSTGUG00000028762	ENSTGUG00000024431	RPS11 (ENSTGUG00000000582)	ENSTGUG00000000588 #20	CNGA4 (ENSTGUG00000022508) #21	ENSTGUG00000025680 #22	ENSTGUG00000022950	ENSTGUG00000029169	ENSTGUG00000028748 #20	ENSTGUG00000028105 #22	SMPD1 (ENSTGUG00000021401) #24	ENSTGUG00000020302 #25	TRIM3 (ENSTGUG00000000602) #27	ARFIP2 (ENSTGUG00000014784) #28	ENSTGUG00000025726 #29	ENSTGUG00000016384	RRP8 (ENSTGUG00000000591) #30	ILK (ENSTGUG00000000595) #31	TAF10 (ENSTGUG00000026223) #32	TPP1 (ENSTGUG00000000610) #33	ENSTGUG00000000619	LCMT2 (ENSTGUG00000000626)
Zebra finch	MODERN SPECIES		CHRNA10 (ENSTGUG00000023632)	ENSTGUG00000000569	OR51E2 (ENSTGUG00000027638)	ENSTGUG00000027908	ENSTGUG00000020222	ENSTGUG00000020485	ENSTGUG00000026720	ENSTGUG00000027415	ENSTGUG00000023257	ENSTGUG00000023804	ENSTGUG00000028762	ENSTGUG00000024431	RPS11 (ENSTGUG00000000582)	ENSTGUG00000000588 #20	CNGA4 (ENSTGUG00000022508) #21	ENSTGUG00000025680 #22	ENSTGUG00000022950	ENSTGUG00000029169	ENSTGUG00000028748 #20	ENSTGUG00000028105 #22	SMPD1 (ENSTGUG00000021401) #24	ENSTGUG00000020302 #25	TRIM3 (ENSTGUG00000000602) #27	ARFIP2 (ENSTGUG00000014784) #28	ENSTGUG00000025726 #29	ENSTGUG00000016384	RRP8 (ENSTGUG00000000591) #30	ILK (ENSTGUG00000000595) #31	TAF10 (ENSTGUG00000026223) #32	TPP1 (ENSTGUG00000000610) #33	ENSTGUG00000000619
Cryptodira	ANCESTRAL SPECIES	116												ENSGT00940000155116.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT01030000237177
Testudinoidea	ANCESTRAL SPECIES	91												ENSGT00940000155116.a	ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00950000183182.b #24	ENSGT00390000000002.a.b #25	ENSGT01030000237177
Testudinidae	ANCESTRAL SPECIES	95													ENSGT00390000016268 #19	ENSGT00950000182936.a.a.a #20	ENSGT00940000159415 #21	ENSGT01100000263563.c.a #22	ENSGT00940000158173.c #27	ENSGT00950000183040.A.a #28	ENSGT00450000040326 #29	ENSGT00940000155523	ENSGT01000000216338	ENSGT00390000006189 #30	ENSGT00940000155956 #31	ENSGT00390000009368 #32	ENSGT00390000008684 #33	ENSGT00940000163671.b.i	ENSGT00940000163671.b.j	ENSGT00940000162599	ENSGT00390000018035
Goode s thornscrub tortoise	MODERN SPECIES	161									ENSGEVG00005017777	ENSGEVG00005017759	ENSGEVG00005017742	ENSGEVG00005017720	ENSGEVG00005017704	FHIP1B (ENSGEVG00005017683) #20	CNGA4 (ENSGEVG00005017563) #21	CCKBR (ENSGEVG00005017513) #22	TRIM3 (ENSGEVG00005017455) #27	ENSGEVG00005017421	ARFIP2 (ENSGEVG00005017366) #28	TIMM10B (ENSGEVG00005017338) #29	ENSGEVG00005017172	ENSGEVG00005017127	ENSGEVG00005017100	ENSGEVG00005017072	RRP8 (ENSGEVG00005017042) #30	ILK (ENSGEVG00005016988) #31	TAF10 (ENSGEVG00005016922) #32	TPP1 (ENSGEVG00005016894) #33	ENSGEVG00005016692	LCMT2 (ENSGEVG00005016633)	ENSGEVG00005016613
Abingdon island giant tortoise	MODERN SPECIES	1247																CCKBR (ENSCABG00000000723) #22
Emydidae	ANCESTRAL SPECIES																	ENSGT01100000263563.c.a #22
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	997																ENSTMTG00000008965 #22
Three-toed box turtle	MODERN SPECIES	579																ENSTMTG00000011956 #22
painted turtle	MODERN SPECIES	2271																CCKBR (ENSCPBG00000017262) #22
Anura	ANCESTRAL SPECIES																	ENSGT01100000263563.c.a #22
Leishan spiny toad	MODERN SPECIES	485																CCKBR (ENSLLEG00000010989) #22
Frog	MODERN SPECIES	2	art5 (ENSXETG00000010526)	ENSXETG00000041420	XB5918646 [provisional] (ENSXETG00000048232)	ENSXETG00000045100	ENSXETG00000048682	art1 (ENSXETG00000000009)	ENSXETG00000018102	ENSXETG00000043246	znf37a (ENSXETG00000000007)	ENSXETG00000018683	alox12b (ENSXETG00000043131)	ENSXETG00000049260	alox15b (ENSXETG00000000004)	ENSXETG00000038245	ENSXETG00000034691	cckbr (ENSXETG00000048557) #22	ENSXETG00000042563	ENSXETG00000046871	ENSXETG00000025307	ENSXETG00000043693	smpd1 (ENSXETG00000048357) #24	ENSXETG00000048713	ENSXETG00000047476 #25	ENSXETG00000045947 #25	ENSXETG00000045542	vps16 (ENSXETG00000027061)	hpx (ENSXETG00000004700) #26	ENSXETG00000045447	dchs1 (ENSXETG00000004692)	trim3 (ENSXETG00000004691) #27	ENSXETG00000041701