Sarcopterygii ANCESTRAL SPECIES 1138 ENSGT01100000263563.c.a #22 ENSGT00990000210921 Tetrapoda ANCESTRAL SPECIES 188 ENSGT00940000155116.a ENSGT00980000198666 ENSGT00940000174587 ENSGT00950000183040.A.a #28 ENSGT00940000158173 #27 ENSGT00940000164246.C ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00990000210921 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 Amniota ANCESTRAL SPECIES 60 ENSGT00950000183078.b.a.a ENSGT00390000013075.a ENSGT00940000169757 ENSGT00940000160721 ENSGT00550000074799 ENSGT01060000250461 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.a ##14 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00990000210921 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 Mammalia ANCESTRAL SPECIES 99 ENSGT01100000263554.C.e.a ENSGT01100000263522.A.c.b.c.b ##7 ENSGT01100000263522.A.d #7 ENSGT01100000263528.D #8 ENSGT01090000260056.a.a.a.a.a.a ENSGT01090000260056.a.a.a.b ENSGT00940000155550 ENSGT00940000155116.a ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 Theria ANCESTRAL SPECIES 52 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Eutheria ANCESTRAL SPECIES 3 ENSGT01090000260056.a.a.a.a.a.b.b ENSGT01090000260056.a.a.a.a.a.a.a.a ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000162005 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Euarchontoglires ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Glires ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Rodentia ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Rodentia_A ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.a.b.a ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Hystricomorpha ANCESTRAL SPECIES 5 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263528.D.c.b.b.b.b ##8 ENSGT00940000162320 ENSGT00940000161235.d ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Hystricomorpha_a ANCESTRAL SPECIES 47 ENSGT01090000260043.a.a.a.b.a.a.a.b ##16 ENSGT00940000163021 ENSGT00940000154647 ENSGT00940000162320 ENSGT01100000263528.D.c.a.b ##8 ENSGT00940000161235.d ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Guinea pig MODERN SPECIES 71 OR56B1 (ENSCPOG00000026597) #7 ENSCPOG00000040609 #8 ENSCPOG00000037686 #9 ENSCPOG00000039770 #10 ENSCPOG00000001364 #11 OR56A5 (ENSCPOG00000036870) #12 ENSCPOG00000034113 #13 OR52L1 (ENSCPOG00000031284) #14 OR56B4 (ENSCPOG00000010162) #15 ENSCPOG00000036043 #16 ENSCPOG00000026446 #17 ENSCPOG00000039472 #18 C11orf42 (ENSCPOG00000025622) #19 FHIP1B (ENSCPOG00000007380) #20 CNGA4 (ENSCPOG00000026306) #21 CCKBR (ENSCPOG00000025284) #22 CAVIN3 (ENSCPOG00000032337) #23 SMPD1 (ENSCPOG00000002182) #24 APBB1 (ENSCPOG00000019866) #25 HPX (ENSCPOG00000008947) #26 TRIM3 (ENSCPOG00000001032) #27 ARFIP2 (ENSCPOG00000006254) #28 TIMM10B (ENSCPOG00000034824) #29 DNHD1 (ENSCPOG00000012612) #30 RRP8 (ENSCPOG00000012515) #31 ILK (ENSCPOG00000012519) #32 TAF10 (ENSCPOG00000012528) #33 TPP1 (ENSCPOG00000012530) #34 DCHS1 (ENSCPOG00000012536) #35 MRPL17 (ENSCPOG00000032658) #36 ENSCPOG00000038419 #37 Hystricomorpha_b ANCESTRAL SPECIES 5 ENSGT01090000260043.a.b.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263528.D.c.b.b.b.b ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.a.b ##8 ENSGT00940000161235.d ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Long-tailed chinchilla MODERN SPECIES 121 ENSCLAG00000017948 ##16 ENSCLAG00000015771 ##8 ENSCLAG00000017921 ##8 ENSCLAG00000017946 ##8 ENSCLAG00000016390 ##8 ENSCLAG00000018063 #8 OR52N2 (ENSCLAG00000015756) #11 ENSCLAG00000017982 OR56A3 (ENSCLAG00000018004) OR56B4 (ENSCLAG00000016709) #15 ENSCLAG00000016797 ENSCLAG00000017952 #16 C11orf42 (ENSCLAG00000017028) #19 FHIP1B (ENSCLAG00000014717) #20 CNGA4 (ENSCLAG00000015822) #21 CCKBR (ENSCLAG00000016095) #22 CAVIN3 (ENSCLAG00000016165) #23 APBB1 (ENSCLAG00000016385) #25 SMPD1 (ENSCLAG00000015736) #24 HPX (ENSCLAG00000015831) #26 TRIM3 (ENSCLAG00000016691) #27 ARFIP2 (ENSCLAG00000016235) #28 TIMM10B (ENSCLAG00000016675) #29 DNHD1 (ENSCLAG00000016233) #30 RRP8 (ENSCLAG00000016099) #31 ILK (ENSCLAG00000016735) #32 TAF10 (ENSCLAG00000016444) #33 TPP1 (ENSCLAG00000016546) #34 DCHS1 (ENSCLAG00000015967) #35 MRPL17 (ENSCLAG00000015854) #36 ENSCLAG00000016844 Degu MODERN SPECIES 187 ENSODEG00000008435 TRIM6 (ENSODEG00000010687) TRIM34 (ENSODEG00000009221) ENSODEG00000010404 OR56B1 (ENSODEG00000009163) #7 OR52N5 (ENSODEG00000011280) ##8 OR56A4 (ENSODEG00000019606) OR52L1 (ENSODEG00000008875) #14 ENSODEG00000008859 #13 OR56B4 (ENSODEG00000009118) #15 OR52B2 (ENSODEG00000019615) #17 C11orf42 (ENSODEG00000009450) #19 FHIP1B (ENSODEG00000010032) #20 CNGA4 (ENSODEG00000009610) #21 ENSODEG00000019633 CCKBR (ENSODEG00000009617) #22 CAVIN3 (ENSODEG00000008610) #23 SMPD1 (ENSODEG00000009418) #24 APBB1 (ENSODEG00000009364) #25 HPX (ENSODEG00000009007) #26 TRIM3 (ENSODEG00000010111) #27 ARFIP2 (ENSODEG00000008803) #28 TIMM10B (ENSODEG00000010061) #29 DNHD1 (ENSODEG00000009702) #30 RRP8 (ENSODEG00000011209) #31 ILK (ENSODEG00000010914) #32 TAF10 (ENSODEG00000012140) #33 TPP1 (ENSODEG00000009821) #34 DCHS1 (ENSODEG00000010062) #35 MRPL17 (ENSODEG00000009556) #36 ENSODEG00000009242 Naked mole-rat female MODERN SPECIES 24 ENSHGLG00000020541 OR52E5 (ENSHGLG00000010640) ENSHGLG00000038234 ENSHGLG00000036553 ENSHGLG00000021059 ENSHGLG00000021233 ENSHGLG00000021197 ENSHGLG00000021343 #14 ENSHGLG00000021230 #13 OR56B4 (ENSHGLG00000021275) #15 OR52B2 (ENSHGLG00000021062) #17 OR52W1 (ENSHGLG00000015412) #18 C11orf42 (ENSHGLG00000015442) #19 FHIP1B (ENSHGLG00000019367) #20 CNGA4 (ENSHGLG00000012330) #21 CCKBR (ENSHGLG00000004767) #22 CAVIN3 (ENSHGLG00000005382) #23 SMPD1 (ENSHGLG00000009996) #24 APBB1 (ENSHGLG00000010438) #25 HPX (ENSHGLG00000003482) #26 TRIM3 (ENSHGLG00000004231) #27 ARFIP2 (ENSHGLG00000007482) #28 TIMM10B (ENSHGLG00000004159) #29 ENSHGLG00000003314 #30 RRP8 (ENSHGLG00000003980) #31 ILK (ENSHGLG00000043271) #32 TAF10 (ENSHGLG00000044528) #33 TPP1 (ENSHGLG00000003787) #34 DCHS1 (ENSHGLG00000004668) #35 MRPL17 (ENSHGLG00000006859) #36 ENSHGLG00000033422 Sciuridae ANCESTRAL SPECIES 2 ENSGT01090000260056.a.a.a.a.a.a.a.a ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.k Marmotini ANCESTRAL SPECIES 22 ENSGT01090000260056.a.a.a.b.i ENSGT00940000155550.a.b.k ENSGT00940000161235.d.e.b ENSGT00940000161235.d.f ENSGT01100000263528.D.d.a.a #11 ENSGT01100000263528.D.c.a.a #10 ENSGT01100000263528.D.c.a.b.k.b ##8 ENSGT00940000161235.d.e.a ENSGT00940000163046 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.k Marmotini_b ANCESTRAL SPECIES 129 ENSGT01100000263528.D.c.b.b.a.d ##8 ENSGT01100000263522.A.d.b.o #9 ENSGT01100000263528.D.c.b.b.a.c ##8 ENSGT01100000263528.D.c.b.b.b.a.b.a #8 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.b.i ENSGT00940000155550.a.b.l ENSGT00940000161235.d.e.a ENSGT00940000163046 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.k Squirrel MODERN SPECIES 442 ENSSTOG00000003642 ENSSTOG00000015291 ENSSTOG00000031692 OR52E5 (ENSSTOG00000026771) ENSSTOG00000030362 OR56A1 (ENSSTOG00000033047) ENSSTOG00000034429 #15 OR52B2 (ENSSTOG00000021260) #17 OR52W1 (ENSSTOG00000013265) #18 C11orf42 (ENSSTOG00000013268) #19 FHIP1B (ENSSTOG00000013275) #20 CNGA4 (ENSSTOG00000013282) #21 CCKBR (ENSSTOG00000011354) #22 CAVIN3 (ENSSTOG00000016050) #23 SMPD1 (ENSSTOG00000009041) #24 APBB1 (ENSSTOG00000009066) #25 HPX (ENSSTOG00000031743) #26 TRIM3 (ENSSTOG00000025640) #27 ARFIP2 (ENSSTOG00000015033) #28 TIMM10B (ENSSTOG00000015036) #29 ENSSTOG00000030705 #30 ENSSTOG00000029899 RRP8 (ENSSTOG00000016272) #31 ILK (ENSSTOG00000011619) #32 TAF10 (ENSSTOG00000011631) #33 TPP1 (ENSSTOG00000011638) #34 DCHS1 (ENSSTOG00000025568) #35 ENSSTOG00000003313 #36 Arctic ground squirrel MODERN SPECIES 618 OR56A4 (ENSUPAG00010006089) OR56A1 (ENSUPAG00010006096) OR56B4 (ENSUPAG00010006127) #15 OR52B2 (ENSUPAG00010006128) #17 OR52W1 (ENSUPAG00010006135) #18 C11orf42 (ENSUPAG00010006138) #19 FHIP1B (ENSUPAG00010006144) #20 CNGA4 (ENSUPAG00010006245) #21 CCKBR (ENSUPAG00010006254) #22 CAVIN3 (ENSUPAG00010006261) #23 SMPD1 (ENSUPAG00010006268) #24 APBB1 (ENSUPAG00010006285) #25 HPX (ENSUPAG00010007110) #26 TRIM3 (ENSUPAG00010007116) #27 ARFIP2 (ENSUPAG00010007129) #28 TIMM10B (ENSUPAG00010007203) #29 ENSUPAG00010007215 #30 RRP8 (ENSUPAG00010007222) #31 ILK (ENSUPAG00010007263) #32 TAF10 (ENSUPAG00010007279) #33 TPP1 (ENSUPAG00010007294) #34 DCHS1 (ENSUPAG00010007314) #35 MRPL17 (ENSUPAG00010007341) #36 ENSUPAG00010007352 Alpin marmot MODERN SPECIES 3 ENSMMMG00000014576 #11 ENSMMMG00000014589 ##8 ENSMMMG00000014601 ENSMMMG00000014605 ENSMMMG00000014613 ENSMMMG00000014637 ENSMMMG00000014642 ENSMMMG00000014651 OR56A1 (ENSMMMG00000014668) OR56B4 (ENSMMMG00000014683) #15 OR52B2 (ENSMMMG00000014688) #17 OR52W1 (ENSMMMG00000014694) #18 C11orf42 (ENSMMMG00000014695) #19 FHIP1B (ENSMMMG00000014699) #20 CNGA4 (ENSMMMG00000014908) #21 CCKBR (ENSMMMG00000014916) #22 CAVIN3 (ENSMMMG00000014919) #23 SMPD1 (ENSMMMG00000014926) #24 APBB1 (ENSMMMG00000014931) #25 HPX (ENSMMMG00000015345) #26 TRIM3 (ENSMMMG00000015353) #27 ARFIP2 (ENSMMMG00000015366) #28 TIMM10B (ENSMMMG00000015480) #29 ENSMMMG00000015487 #30 RRP8 (ENSMMMG00000015503) #31 ILK (ENSMMMG00000015510) #32 TAF10 (ENSMMMG00000015559) #33 TPP1 (ENSMMMG00000015567) #34 DCHS1 (ENSMMMG00000015573) #35 ENSMMMG00000015593 #36 ENSMMMG00000015601 Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005007964 ##8 OR52E4 (ENSSVLG00005007949) OR52E5 (ENSSVLG00005007936) OR56A3 (ENSSVLG00005007926) OR56A4 (ENSSVLG00005007916) ENSSVLG00005007893 #14 ENSSVLG00005007880 #13 OR56B4 (ENSSVLG00005007865) #15 ENSSVLG00005007844 #17 ENSSVLG00005007824 #16 ENSSVLG00005007809 #17 OR52W1 (ENSSVLG00005007793) #18 C11orf42 (ENSSVLG00005007762) #19 FHIP1B (ENSSVLG00005007692) #20 CNGA4 (ENSSVLG00005007640) #21 CCKBR (ENSSVLG00005007574) #22 CAVIN3 (ENSSVLG00005007510) #23 SMPD1 (ENSSVLG00005007479) #24 APBB1 (ENSSVLG00005007218) #25 HPX (ENSSVLG00005007102) #26 ENSSVLG00005007076 #27 ARFIP2 (ENSSVLG00005006992) #28 TIMM10B (ENSSVLG00005006936) #29 ENSSVLG00005006905 #30 ENSSVLG00005006876 #30 ENSSVLG00005006819 ENSSVLG00005006785 ENSSVLG00005006757 ENSSVLG00005006676 #31 ILK (ENSSVLG00005006591) #32 ENSSVLG00005006530 #33 Rodentia_B ANCESTRAL SPECIES 39 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT01090000260013.b.a.a.a.a #14 ENSGT00940000161235.c.a ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.t #37 Myomorpha ANCESTRAL SPECIES 13 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT01090000260013.b.a.a.a.a #14 ENSGT00940000161235.c.a ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Muroidea ANCESTRAL SPECIES 12 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT01090000260013.b.a.a.a.a #14 ENSGT00940000161235.c.a ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Muroidea_A ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT01090000260013.b.a.a.a.a #14 ENSGT00940000161235.c.a ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.i Cricetidae ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.i Cricetidae_B ANCESTRAL SPECIES 38 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.i Northern American deer mouse MODERN SPECIES Or52e5 (ENSPEMG00000009085) ENSPEMG00000009154 ENSPEMG00000015213 Or56a5 (ENSPEMG00000014888) ENSPEMG00000027434 #14 Or56a4 (ENSPEMG00000005422) ENSPEMG00000027104 #14 Or52x1 (ENSPEMG00000025562) #13 ENSPEMG00000028849 #15 Or52b1 (ENSPEMG00000001937) #16 Or52b2 (ENSPEMG00000003832) #17 Or52w1 (ENSPEMG00000024874) #18 Gm5901 (ENSPEMG00000028535) #19 Fhip1b (ENSPEMG00000016321) #20 Cnga4 (ENSPEMG00000002635) #21 Cckbr (ENSPEMG00000028494) #22 Cavin3 (ENSPEMG00000001842) #23 Smpd1 (ENSPEMG00000011471) #24 Apbb1 (ENSPEMG00000017999) #25 Hpx (ENSPEMG00000013536) #26 Trim3 (ENSPEMG00000018621) #27 Arfip2 (ENSPEMG00000002024) #28 ENSPEMG00000018320 #29 Dnhd1 (ENSPEMG00000016505) #30 Rrp8 (ENSPEMG00000017257) #31 Ilk (ENSPEMG00000017998) #32 ENSPEMG00000007669 #33 Tpp1 (ENSPEMG00000018870) #34 Dchs1 (ENSPEMG00000010052) #35 Mrpl17 (ENSPEMG00000012735) #36 ENSPEMG00000014624 Prairie vole MODERN SPECIES 156 Or52d3 (ENSMOCG00000001901) ##16 Or52p1 (ENSMOCG00000001680) ##8 ENSMOCG00000001675 ENSMOCG00000001364 ##8 ENSMOCG00000011458 Or52n5 (ENSMOCG00000001634) ##8 Or52n2b (ENSMOCG00000002085) #11 ENSMOCG00000002471 #11 ENSMOCG00000022508 ENSMOCG00000001983 ENSMOCG00000019892 #14 ENSMOCG00000006309 #14 ENSMOCG00000020357 Fhip1b (ENSMOCG00000000194) #20 Cnga4 (ENSMOCG00000017722) #21 Cckbr (ENSMOCG00000016332) #22 Cavin3 (ENSMOCG00000020058) #23 Smpd1 (ENSMOCG00000014626) #24 Apbb1 (ENSMOCG00000016491) #25 Hpx (ENSMOCG00000019138) #26 Trim3 (ENSMOCG00000014561) #27 Arfip2 (ENSMOCG00000013267) #28 Dnhd1 (ENSMOCG00000015718) #30 Rrp8 (ENSMOCG00000002486) #31 Ilk (ENSMOCG00000019082) #32 Taf10 (ENSMOCG00000011482) #33 Tpp1 (ENSMOCG00000018766) #34 Dchs1 (ENSMOCG00000005765) #35 Mrpl17 (ENSMOCG00000018077) #36 Cricetinae ANCESTRAL SPECIES 2 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b Golden Hamster MODERN SPECIES 885 ENSMAUG00000003280 Or52e7 (ENSMAUG00000015232) Or52e4 (ENSMAUG00000015298) ENSMAUG00000020299 Or52l1 (ENSMAUG00000002421) #14 Or52x1 (ENSMAUG00000020381) #13 Or52b2 (ENSMAUG00000002780) #17 Gm5901 (ENSMAUG00000019054) #19 Fhip1b (ENSMAUG00000020576) #20 Cnga4 (ENSMAUG00000006254) #21 Cckbr (ENSMAUG00000017780) #22 Cavin3 (ENSMAUG00000010741) #23 Smpd1 (ENSMAUG00000007723) #24 Apbb1 (ENSMAUG00000001261) #25 Hpx (ENSMAUG00000015159) #26 Trim3 (ENSMAUG00000002410) #27 Arfip2 (ENSMAUG00000012245) #28 ENSMAUG00000008495 #29 Dnhd1 (ENSMAUG00000011515) #30 Rrp8 (ENSMAUG00000000324) #31 Ilk (ENSMAUG00000019863) #32 Taf10 (ENSMAUG00000012796) #33 Tpp1 (ENSMAUG00000005575) #34 Dchs1 (ENSMAUG00000008012) #35 Chinese hamster chok1gshd MODERN SPECIES 401 ENSCGRG00001024119 ENSCGRG00001004734 ENSCGRG00001024880 Or56a5 (ENSCGRG00001007102) ENSCGRG00001007550 #14 Or56a4 (ENSCGRG00001012677) ENSCGRG00001012597 #14 Or52x1 (ENSCGRG00001001121) #13 ENSCGRG00001003390 #15 Or52b1 (ENSCGRG00001017563) #16 Or52b2 (ENSCGRG00001001666) #17 Or52w1 (ENSCGRG00001001861) #18 Gm5901 (ENSCGRG00001000187) #19 Fhip1b (ENSCGRG00001008833) #20 Cnga4 (ENSCGRG00001012542) #21 Cckbr (ENSCGRG00001014745) #22 Cavin3 (ENSCGRG00001012197) #23 Smpd1 (ENSCGRG00001013290) #24 Apbb1 (ENSCGRG00001023039) #25 Hpx (ENSCGRG00001018175) #26 Trim3 (ENSCGRG00001021547) #27 Arfip2 (ENSCGRG00001006756) #28 ENSCGRG00001011475 Dnhd1 (ENSCGRG00001000945) #30 Rrp8 (ENSCGRG00001003103) #31 Ilk (ENSCGRG00001022853) #32 Taf10 (ENSCGRG00001017301) #33 ENSCGRG00001010929 #34 Dchs1 (ENSCGRG00001013120) #35 ENSCGRG00001018404 #36 ENSCGRG00001019088 #36 Murinae ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.i Mus ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.h.a Mus_A ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.h.a Mus_B ANCESTRAL SPECIES ENSGT00940000155550.a.b.h ENSGT00940000161235.d ENSGT00940000155550.a.b.g ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a.m #15 ENSGT01100000263522.A.d.a.a.n #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.h.a.a Mus_C ANCESTRAL SPECIES 14 ENSGT01090000260056.a.a.a.a.b ENSGT00940000155550.a.b.g ENSGT00940000161235.d ENSGT00940000161235.c.b ENSGT00940000161235.c.a ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a.m #15 ENSGT01100000263522.A.d.a.a.n #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.i Steppe mouse MODERN SPECIES 2554 ENSMSIG00000027680 #15 Or56b35 (ENSMSIG00000027683) #15 Or52b1 (ENSMSIG00000027686) #16 Or52b2 (ENSMSIG00000027691) #17 Or52w1 (ENSMSIG00000027693) #18 Gm5901 (ENSMSIG00000027695) #19 Fhip1b (ENSMSIG00000027701) #20 Cnga4 (ENSMSIG00000027737) #21 Cckbr (ENSMSIG00000027749) #22 Cavin3 (ENSMSIG00000027774) #23 Smpd1 (ENSMSIG00000027781) #24 Apbb1 (ENSMSIG00000027795) #25 Hpx (ENSMSIG00000028059) #26 Trim3 (ENSMSIG00000028064) #27 Arfip2 (ENSMSIG00000028074) #28 Timm10b (ENSMSIG00000028100) Dnhd1 (ENSMSIG00000028126) #30 Rrp8 (ENSMSIG00000028154) #31 Ilk (ENSMSIG00000028162) #32 Taf10 (ENSMSIG00000028175) #33 Tpp1 (ENSMSIG00000028180) #34 Dchs1 (ENSMSIG00000028190) #35 Mrpl17 (ENSMSIG00000028213) #36 ENSMSIG00000028217 spretus MODERN SPECIES 16 MGP_SPRETEiJ_G0031324 MGP_SPRETEiJ_G0031325 MGP_SPRETEiJ_G0031326 MGP_SPRETEiJ_G0031327 Or52l1 (MGP_SPRETEiJ_G0031328) #14 Or52x1 (MGP_SPRETEiJ_G0031329) #13 MGP_SPRETEiJ_G0031330 #15 MGP_SPRETEiJ_G0031331 #15 MGP_SPRETEiJ_G0031332 #15 Or52b1 (MGP_SPRETEiJ_G0031333) #16 Or52b2 (MGP_SPRETEiJ_G0031334) #17 Or52w1 (MGP_SPRETEiJ_G0031335) #18 Fhip1b (MGP_SPRETEiJ_G0031336) #20 Gm5901 (MGP_SPRETEiJ_G0031337) #19 Cnga4 (MGP_SPRETEiJ_G0031338) #21 Cckbr (MGP_SPRETEiJ_G0031339) #22 Cavin3 (MGP_SPRETEiJ_G0031340) #23 Smpd1 (MGP_SPRETEiJ_G0031341) #24 Apbb1 (MGP_SPRETEiJ_G0031342) #25 Hpx (MGP_SPRETEiJ_G0031343) #26 Trim3 (MGP_SPRETEiJ_G0031344) #27 Arfip2 (MGP_SPRETEiJ_G0031345) #28 MGP_SPRETEiJ_G0031346 #29 Dnhd1 (MGP_SPRETEiJ_G0031347) #30 Rrp8 (MGP_SPRETEiJ_G0031348) #31 Ilk (MGP_SPRETEiJ_G0031349) #32 Taf10 (MGP_SPRETEiJ_G0031350) #33 Tpp1 (MGP_SPRETEiJ_G0031351) #34 Dchs1 (MGP_SPRETEiJ_G0031352) #35 Mrpl17 (MGP_SPRETEiJ_G0031353) #36 Or2ag12 (MGP_SPRETEiJ_G0031354) #37 Mouse MODERN SPECIES 16 Or56a41 (ENSMUSG00000041885) Or56a3b (ENSMUSG00000095248) Or56a42-ps1 (ENSMUSG00000059768) Or56a5 (ENSMUSG00000044120) Or56a4 (ENSMUSG00000047225) Or52l1 (ENSMUSG00000047794) #14 Or52x1 (ENSMUSG00000048425) #13 Or56b34 (ENSMUSG00000073909) #15 Or56b35 (ENSMUSG00000073907) #15 Or52b1 (ENSMUSG00000050266) #16 Or52b2 (ENSMUSG00000043948) #17 Or52w1 (ENSMUSG00000073906) #18 Fhip1b (ENSMUSG00000044465) #20 Gm5901 (ENSMUSG00000078611) #19 Cnga4 (ENSMUSG00000030897) #21 Cckbr (ENSMUSG00000030898) #22 Cavin3 (ENSMUSG00000037060) #23 Smpd1 (ENSMUSG00000037049) #24 Apbb1 (ENSMUSG00000037032) #25 Hpx (ENSMUSG00000030895) #26 Trim3 (ENSMUSG00000036989) #27 Arfip2 (ENSMUSG00000030881) #28 Timm10b (ENSMUSG00000089847) Gm45799 (ENSMUSG00000110234) Dnhd1 (ENSMUSG00000030882) #30 Rrp8 (ENSMUSG00000030888) #31 Ilk (ENSMUSG00000030890) #32 Taf10 (ENSMUSG00000043866) #33 Tpp1 (ENSMUSG00000030894) #34 Dchs1 (ENSMUSG00000036862) #35 Mrpl17 (ENSMUSG00000030879) #36 Ryukyu mouse MODERN SPECIES 16 Or52e4 (MGP_CAROLIEiJ_G0030212) Or52e5 (MGP_CAROLIEiJ_G0030213) MGP_CAROLIEiJ_G0030214 MGP_CAROLIEiJ_G0030215 MGP_CAROLIEiJ_G0030216 MGP_CAROLIEiJ_G0030218 MGP_CAROLIEiJ_G0030217 Or52l1 (MGP_CAROLIEiJ_G0030219) #14 Or52x1 (MGP_CAROLIEiJ_G0030220) #13 Or52b1 (MGP_CAROLIEiJ_G0030221) #16 Or52b2 (MGP_CAROLIEiJ_G0030222) #17 Or52w1 (MGP_CAROLIEiJ_G0030223) #18 Fhip1b (MGP_CAROLIEiJ_G0030224) #20 Gm5901 (MGP_CAROLIEiJ_G0030225) #19 Cnga4 (MGP_CAROLIEiJ_G0030226) #21 Cckbr (MGP_CAROLIEiJ_G0030227) #22 Cavin3 (MGP_CAROLIEiJ_G0030228) #23 Smpd1 (MGP_CAROLIEiJ_G0030229) #24 Apbb1 (MGP_CAROLIEiJ_G0030230) #25 Hpx (MGP_CAROLIEiJ_G0030231) #26 Trim3 (MGP_CAROLIEiJ_G0030232) #27 Arfip2 (MGP_CAROLIEiJ_G0030233) #28 MGP_CAROLIEiJ_G0030234 #29 Dnhd1 (MGP_CAROLIEiJ_G0030235) #30 Rrp8 (MGP_CAROLIEiJ_G0030236) #31 Ilk (MGP_CAROLIEiJ_G0030237) #32 Taf10 (MGP_CAROLIEiJ_G0030238) #33 Tpp1 (MGP_CAROLIEiJ_G0030239) #34 Dchs1 (MGP_CAROLIEiJ_G0030240) #35 Mrpl17 (MGP_CAROLIEiJ_G0030241) #36 Or2ag12 (MGP_CAROLIEiJ_G0030242) #37 Shrew mouse MODERN SPECIES Or52e4 (MGP_PahariEiJ_G0013427) Or52e5 (MGP_PahariEiJ_G0013428) MGP_PahariEiJ_G0013429 MGP_PahariEiJ_G0013430 MGP_PahariEiJ_G0013431 MGP_PahariEiJ_G0013433 MGP_PahariEiJ_G0013432 Or52x1 (MGP_PahariEiJ_G0013434) #13 MGP_PahariEiJ_G0013435 #15 Or52b1 (MGP_PahariEiJ_G0013436) #16 Or52b2 (MGP_PahariEiJ_G0013437) #17 Or52w1 (MGP_PahariEiJ_G0013438) #18 Fhip1b (MGP_PahariEiJ_G0013439) #20 Gm5901 (MGP_PahariEiJ_G0013440) #19 Cnga4 (MGP_PahariEiJ_G0013441) #21 Cckbr (MGP_PahariEiJ_G0013442) #22 Cavin3 (MGP_PahariEiJ_G0013443) #23 Smpd1 (MGP_PahariEiJ_G0013444) #24 MGP_PahariEiJ_G0013445 ##25 Hpx (MGP_PahariEiJ_G0013446) #26 Trim3 (MGP_PahariEiJ_G0013447) #27 Arfip2 (MGP_PahariEiJ_G0013448) #28 MGP_PahariEiJ_G0013449 #29 Dnhd1 (MGP_PahariEiJ_G0013450) #30 Rrp8 (MGP_PahariEiJ_G0013451) #31 Ilk (MGP_PahariEiJ_G0013452) #32 Taf10 (MGP_PahariEiJ_G0013453) #33 Tpp1 (MGP_PahariEiJ_G0013454) #34 Dchs1 (MGP_PahariEiJ_G0013455) #35 Mrpl17 (MGP_PahariEiJ_G0013456) #36 Or2ag12 (MGP_PahariEiJ_G0013457) #37 Rat MODERN SPECIES ENSRNOG00000066831 Or56a5 (ENSRNOG00000017366) Or56a3b (ENSRNOG00000017357) Or52l1b (ENSRNOG00000063165) #14 Or52l1 (ENSRNOG00000062378) #14 Or52x1 (ENSRNOG00000017379) #13 Or56b6 (ENSRNOG00000064813) #15 Or56b6c (ENSRNOG00000065154) #15 Or56b6b (ENSRNOG00000071019) #15 Or52b1 (ENSRNOG00000017387) #16 Or52b2 (ENSRNOG00000025819) #17 Or52w1 (ENSRNOG00000049480) #18 C1h11orf42 (ENSRNOG00000030818) #19 Fhip1b (ENSRNOG00000017408) #20 Cnga4 (ENSRNOG00000017609) #21 Cckbr (ENSRNOG00000017679) #22 Cavin3 (ENSRNOG00000017914) #23 Smpd1 (ENSRNOG00000017977) #24 Apbb1 (ENSRNOG00000018020) #25 Hpx (ENSRNOG00000018257) #26 Trim3 (ENSRNOG00000018356) #27 Arfip2 (ENSRNOG00000018440) #28 Timm10b (ENSRNOG00000050846) #29 Dnhd1 (ENSRNOG00000051291) #30 Rrp8 (ENSRNOG00000018766) #31 Ilk (ENSRNOG00000018993) #32 Taf10 (ENSRNOG00000019178) #33 Tpp1 (ENSRNOG00000019212) #34 Dchs1 (ENSRNOG00000031643) #35 Mrpl17 (ENSRNOG00000019497) #36 Gvin1 (ENSRNOG00000045560) Upper Galilee mountains blind mole rat MODERN SPECIES 987 Or52h9 (ENSNGAG00000013415) ##16 ENSNGAG00000004243 ##8 ENSNGAG00000013609 ENSNGAG00000008795 Or52e4 (ENSNGAG00000002380) ENSNGAG00000009977 Or56a5 (ENSNGAG00000007882) Or52l1 (ENSNGAG00000005871) #14 Or52w1 (ENSNGAG00000012823) #18 Gm5901 (ENSNGAG00000018588) #19 Fhip1b (ENSNGAG00000012378) #20 Cnga4 (ENSNGAG00000003770) #21 Cckbr (ENSNGAG00000007686) #22 Cavin3 (ENSNGAG00000017606) #23 ENSNGAG00000021942 Smpd1 (ENSNGAG00000022149) #24 Apbb1 (ENSNGAG00000001715) #25 Hpx (ENSNGAG00000023483) #26 Trim3 (ENSNGAG00000022862) #27 Arfip2 (ENSNGAG00000000906) #28 ENSNGAG00000011653 #29 Dnhd1 (ENSNGAG00000017568) #30 Rrp8 (ENSNGAG00000012450) #31 Ilk (ENSNGAG00000017643) #32 Taf10 (ENSNGAG00000018833) #33 Tpp1 (ENSNGAG00000000792) #34 Dchs1 (ENSNGAG00000001902) #35 Mrpl17 (ENSNGAG00000012128) #36 Lesser Egyptian jerboa MODERN SPECIES 43 Ubqln5 (ENSJJAG00000015100) Olfm5 (ENSJJAG00000023376) Trim6 (ENSJJAG00000001536) ENSJJAG00000016123 ENSJJAG00000011165 Or52h7 (ENSJJAG00000018180) ##16 ENSJJAG00000019688 ENSJJAG00000018902 ##8 ENSJJAG00000012376 Or56a4 (ENSJJAG00000011878) Or52l1 (ENSJJAG00000012438) #14 Or52b2 (ENSJJAG00000021881) #17 Gm5901 (ENSJJAG00000019487) #19 Fhip1b (ENSJJAG00000008756) #20 Cnga4 (ENSJJAG00000016710) #21 Cckbr (ENSJJAG00000023339) #22 Cavin3 (ENSJJAG00000022005) #23 Smpd1 (ENSJJAG00000014457) #24 Apbb1 (ENSJJAG00000013460) #25 ENSJJAG00000020266 #26 Trim3 (ENSJJAG00000013162) #27 Arfip2 (ENSJJAG00000001788) #28 ENSJJAG00000016632 #29 ENSJJAG00000023934 #30 ENSJJAG00000020608 #31 Ilk (ENSJJAG00000018897) #32 Taf10 (ENSJJAG00000013323) #33 Tpp1 (ENSJJAG00000020232) #34 Dchs1 (ENSJJAG00000017088) #35 Mrpl17 (ENSJJAG00000022535) #36 ENSJJAG00000013205 Kangaroo rat MODERN SPECIES 532 Trim6 (ENSDORG00000008938) ENSDORG00000016526 ENSDORG00000023669 ENSDORG00000025321 Or52u1 (ENSDORG00000027850) ##8 ENSDORG00000025311 #9 ENSDORG00000028411 ##8 Or52e7 (ENSDORG00000028818) ENSDORG00000023235 Or52l1 (ENSDORG00000002636) #14 Or52x1 (ENSDORG00000027653) #13 Or52b2 (ENSDORG00000025681) #17 Gm5901 (ENSDORG00000013973) #19 Fhip1b (ENSDORG00000013975) #20 Cnga4 (ENSDORG00000013976) #21 Cckbr (ENSDORG00000013978) #22 Cavin3 (ENSDORG00000015182) #23 Smpd1 (ENSDORG00000027927) #24 Apbb1 (ENSDORG00000007507) #25 ENSDORG00000025077 #26 Trim3 (ENSDORG00000010666) #27 Arfip2 (ENSDORG00000010668) #28 ENSDORG00000010671 #29 ENSDORG00000029797 #30 Rrp8 (ENSDORG00000000103) #31 Ilk (ENSDORG00000000519) #32 Taf10 (ENSDORG00000000520) #33 Tpp1 (ENSDORG00000000521) #34 Dchs1 (ENSDORG00000000524) #35 Mrpl17 (ENSDORG00000026555) #36 Lagomorpha ANCESTRAL SPECIES 55 ENSGT01100000263522.A.d.b #9 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.c.a.a #10 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.a.b.a ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT00940000155550.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000163046 ENSGT00940000161235 ENSGT01100000263522.A.d.a.a #15 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Rabbit MODERN SPECIES ENSOCUG00000039016 ##8 OR52N1 (ENSOCUG00000002488) #10 OR52N2 (ENSOCUG00000009059) #11 ENSOCUG00000002097 ENSOCUG00000021205 OR56A3 (ENSOCUG00000006178) OR52E5 (ENSOCUG00000010873) ENSOCUG00000036314 OR56A1 (ENSOCUG00000001495) OR56A4 (ENSOCUG00000006619) OR56B4 (ENSOCUG00000011965) #15 FHIP1B (ENSOCUG00000007791) #20 OR52W1 (ENSOCUG00000024068) #18 C11orf42 (ENSOCUG00000017869) #19 CNGA4 (ENSOCUG00000010010) #21 CCKBR (ENSOCUG00000007797) #22 ENSOCUG00000039447 ENSOCUG00000037294 CAVIN3 (ENSOCUG00000007808) #23 SMPD1 (ENSOCUG00000015737) #24 APBB1 (ENSOCUG00000016929) #25 TRIM3 (ENSOCUG00000016940) #27 ARFIP2 (ENSOCUG00000016950) #28 TIMM10B (ENSOCUG00000016956) #29 DNHD1 (ENSOCUG00000016970) #30 RRP8 (ENSOCUG00000027619) #31 ILK (ENSOCUG00000006593) #32 TAF10 (ENSOCUG00000006599) #33 TPP1 (ENSOCUG00000006604) #34 DCHS1 (ENSOCUG00000006606) #35 ENSOCUG00000033973 Pika MODERN SPECIES 3601 OR52W1 (ENSOPRG00000007779) #18 C11orf42 (ENSOPRG00000007789) #19 FHIP1B (ENSOPRG00000007800) #20 CNGA4 (ENSOPRG00000007827) #21 CCKBR (ENSOPRG00000007837) #22 CAVIN3 (ENSOPRG00000007851) #23 SMPD1 (ENSOPRG00000007856) #24 APBB1 (ENSOPRG00000007891) #25 HPX (ENSOPRG00000007923) #26 TRIM3 (ENSOPRG00000007943) #27 ARFIP2 (ENSOPRG00000007962) #28 TIMM10B (ENSOPRG00000007976) #29 ENSOPRG00000007979 #30 ENSOPRG00000008005 #30 RRP8 (ENSOPRG00000008052) #31 ILK (ENSOPRG00000008059) #32 TAF10 (ENSOPRG00000008076) #33 TPP1 (ENSOPRG00000008091) #34 DCHS1 (ENSOPRG00000008111) #35 MRPL17 (ENSOPRG00000008141) #36 Primates ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.b ENSGT00940000155550.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Haplorrhini ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.a.a.a.a.a.r ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b #37 Simiiformes ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Catarrhini ANCESTRAL SPECIES 1 ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263522.A.d.b #9 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.c.a.a #10 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a ENSGT01100000263528.A.a.b #13 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Hominoidea ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT01090000260013.b.a.a.a.a.f #14 ENSGT00940000161235 ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a.e #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Hominidae ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT01090000260013.b.a.a.a.a.f #14 ENSGT00940000161235 ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a.e #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 20 ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT01090000260013.b.a.a.a.a.f #14 ENSGT00940000161235 ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a.e #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Homo/Pan group ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT01090000260013.b.a.a.a.a.f #14 ENSGT00940000161235 ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a.e #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Pan ANCESTRAL SPECIES 1 ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000162834 #12 ENSGT01090000260013.b.a.a.a.a.f #14 ENSGT00940000161235 ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a.e #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Bonobo MODERN SPECIES 2 OR52E5 (ENSPPAG00000026404) OR56A3 (ENSPPAG00000016608) ENSPPAG00000027678 #12 OR52L1 (ENSPPAG00000012000) #14 OR56A4 (ENSPPAG00000019397) OR56A1 (ENSPPAG00000020365) ENSPPAG00000034552 ENSPPAG00000036208 #14 ENSPPAG00000037080 #13 OR56B4 (ENSPPAG00000018904) #15 ENSPPAG00000039073 #16 OR52W1 (ENSPPAG00000025297) #18 C11orf42 (ENSPPAG00000001175) #19 FHIP1B (ENSPPAG00000030787) #20 CNGA4 (ENSPPAG00000033731) #21 CCKBR (ENSPPAG00000015285) #22 CAVIN3 (ENSPPAG00000042924) #23 ENSPPAG00000031490 #24 APBB1 (ENSPPAG00000035675) #25 HPX (ENSPPAG00000042281) #26 TRIM3 (ENSPPAG00000036529) #27 ARFIP2 (ENSPPAG00000042484) #28 TIMM10B (ENSPPAG00000040105) #29 DNHD1 (ENSPPAG00000036498) #30 RRP8 (ENSPPAG00000040792) #31 ILK (ENSPPAG00000029774) #32 ENSPPAG00000036624 #33 TPP1 (ENSPPAG00000035179) #34 DCHS1 (ENSPPAG00000038073) #35 MRPL17 (ENSPPAG00000038749) #36 ENSPPAG00000026745 Human MODERN SPECIES 2 OR52E6 (ENSG00000205409) OR52E8 (ENSG00000183269) OR52E4 (ENSG00000180974) OR52E5 (ENSG00000277932) OR56A3 (ENSG00000184478) OR56A5 (ENSG00000188691) #12 OR52L1 (ENSG00000183313) #14 OR56A4 (ENSG00000183389) OR56A1 (ENSG00000180934) OR56B4 (ENSG00000180919) #15 OR52B2 (ENSG00000255307) #17 OR52W1 (ENSG00000175485) #18 C11orf42 (ENSG00000180878) #19 FHIP1B (ENSG00000051009) #20 CNGA4 (ENSG00000132259) #21 CCKBR (ENSG00000110148) #22 CAVIN3 (ENSG00000170955) #23 SMPD1 (ENSG00000166311) #24 APBB1 (ENSG00000166313) #25 HPX (ENSG00000110169) #26 TRIM3 (ENSG00000110171) #27 ARFIP2 (ENSG00000132254) #28 TIMM10B (ENSG00000132286) #29 DNHD1 (ENSG00000179532) #30 RRP8 (ENSG00000132275) #31 ILK (ENSG00000166333) #32 TAF10 (ENSG00000166337) #33 TPP1 (ENSG00000166340) #34 DCHS1 (ENSG00000166341) #35 MRPL17 (ENSG00000158042) #36 OR2AG2 (ENSG00000188124) #37 Orangutan MODERN SPECIES 2 TRIM34 (ENSPPYG00000003565) TRIM5 (ENSPPYG00000003564) TRIM22 (ENSPPYG00000003563) OR52N4 (ENSPPYG00000003560) ##8 OR52N5 (ENSPPYG00000037124) ##8 OR52N1 (ENSPPYG00000003559) #10 OR52L1 (ENSPPYG00000038127) #14 OR56A4 (ENSPPYG00000003556) OR56A1 (ENSPPYG00000003555) ENSPPYG00000039725 #14 OR56B4 (ENSPPYG00000003553) #15 OR52B2 (ENSPPYG00000039798) #17 C11orf42 (ENSPPYG00000003551) #19 FHIP1B (ENSPPYG00000003550) #20 CNGA4 (ENSPPYG00000003549) #21 CCKBR (ENSPPYG00000003548) #22 CAVIN3 (ENSPPYG00000003547) #23 SMPD1 (ENSPPYG00000003546) #24 APBB1 (ENSPPYG00000003545) #25 HPX (ENSPPYG00000003544) #26 TRIM3 (ENSPPYG00000003543) #27 ARFIP2 (ENSPPYG00000003542) #28 TIMM10B (ENSPPYG00000003541) #29 DNHD1 (ENSPPYG00000003539) #30 RRP8 (ENSPPYG00000003538) #31 ILK (ENSPPYG00000003537) #32 TAF10 (ENSPPYG00000003536) #33 TPP1 (ENSPPYG00000003535) #34 DCHS1 (ENSPPYG00000031930) #35 MRPL17 (ENSPPYG00000039892) #36 OR2AG2 (ENSPPYG00000030996) #37 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154647 ENSGT00940000163787 ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263522.A.d.b #9 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000162320 ENSGT00940000154647 ENSGT00940000163787 ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.d.a.a #11 ENSGT01100000263522.A.d.a.a #15 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368.o #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000154647 ENSGT00940000163787 ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260013.b.a.a.a.a.f #14 ENSGT00940000161235 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368.o #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Macaca ANCESTRAL SPECIES 2 ENSGT00940000162320 ENSGT00940000154647 ENSGT00940000163787 ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.C ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368.o #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Pig-tailed macaque MODERN SPECIES 149 OR52E5 (ENSMNEG00000044449) OR52L1 (ENSMNEG00000043000) #14 OR56A4 (ENSMNEG00000038450) FHIP1B (ENSMNEG00000045495) #20 C11orf42 (ENSMNEG00000032516) #19 CNGA4 (ENSMNEG00000030801) #21 CCKBR (ENSMNEG00000041531) #22 CAVIN3 (ENSMNEG00000039190) #23 ENSMNEG00000028380 SMPD1 (ENSMNEG00000028675) #24 APBB1 (ENSMNEG00000027172) #25 HPX (ENSMNEG00000039049) #26 TRIM3 (ENSMNEG00000021605) #27 ARFIP2 (ENSMNEG00000042909) #28 TIMM10B (ENSMNEG00000027230) #29 ENSMNEG00000036343 #30 RRP8 (ENSMNEG00000029648) #31 ILK (ENSMNEG00000029810) #32 ENSMNEG00000027938 #33 TPP1 (ENSMNEG00000036554) #34 DCHS1 (ENSMNEG00000008159) #35 MRPL17 (ENSMNEG00000031071) #36 Macaca_a ANCESTRAL SPECIES 3 ENSGT01090000260043.a.a.a.b.a.a.a.b ##16 ENSGT00940000163021 ENSGT00940000162320 ENSGT00940000154647 ENSGT00940000163787 ENSGT01090000260043.a.a.a.b.a.a.a.a.a.b ##16 ENSGT01100000263528.B.a ##8 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368.o #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Rhesus MODERN SPECIES 5 TRIM6 (ENSMMUG00000013490) TRIM5 (ENSMMUG00000000335) TRIM22 (ENSMMUG00000000338) ENSMMUG00000055412 ##8 OR52N4 (ENSMMUG00000000450) ##8 OR52N5 (ENSMMUG00000051279) ##8 OR52N2 (ENSMMUG00000052944) #11 OR52E4 (ENSMMUG00000049399) OR52L1 (ENSMMUG00000013975) #14 OR56A1 (ENSMMUG00000013978) OR52B2 (ENSMMUG00000053716) #17 OR52W1 (ENSMMUG00000056550) #18 C14H11orf42 (ENSMMUG00000016881) #19 FHIP1B (ENSMMUG00000016882) #20 CNGA4 (ENSMMUG00000016883) #21 CCKBR (ENSMMUG00000016884) #22 CAVIN3 (ENSMMUG00000057794) #23 SMPD1 (ENSMMUG00000007717) #24 APBB1 (ENSMMUG00000007723) #25 HPX (ENSMMUG00000007725) #26 TRIM3 (ENSMMUG00000007728) #27 ARFIP2 (ENSMMUG00000007731) #28 TIMM10B (ENSMMUG00000007732) #29 DNHD1 (ENSMMUG00000054897) #30 RRP8 (ENSMMUG00000007738) #31 ILK (ENSMMUG00000007741) #32 TAF10 (ENSMMUG00000007743) #33 TPP1 (ENSMMUG00000007745) #34 DCHS1 (ENSMMUG00000007754) #35 MRPL17 (ENSMMUG00000004544) #36 OR2AG2 (ENSMMUG00000058745) #37 Cercopithecinae_b ANCESTRAL SPECIES 65 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368.o #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 Olive baboon MODERN SPECIES 3 OR52B6 (ENSPANG00000043794) ##16 UBQLNL (ENSPANG00000025846) UBQLN3 (ENSPANG00000045985) ENSPANG00000039579 OR56A4 (ENSPANG00000041251) ENSPANG00000040217 OR56A1 (ENSPANG00000042172) ENSPANG00000048931 ENSPANG00000039129 ENSPANG00000048067 OR52B2 (ENSPANG00000045411) #17 OR52W1 (ENSPANG00000011368) #18 FHIP1B (ENSPANG00000002499) #20 C11orf42 (ENSPANG00000025847) #19 CNGA4 (ENSPANG00000009250) #21 CCKBR (ENSPANG00000024372) #22 CAVIN3 (ENSPANG00000025848) #23 SMPD1 (ENSPANG00000004793) #24 APBB1 (ENSPANG00000019479) #25 HPX (ENSPANG00000014360) #26 TRIM3 (ENSPANG00000006536) #27 ARFIP2 (ENSPANG00000008374) #28 TIMM10B (ENSPANG00000043546) #29 DNHD1 (ENSPANG00000009251) #30 RRP8 (ENSPANG00000006537) #31 ILK (ENSPANG00000023648) #32 TAF10 (ENSPANG00000019610) #33 TPP1 (ENSPANG00000015782) #34 DCHS1 (ENSPANG00000024148) #35 MRPL17 (ENSPANG00000025791) #36 ENSPANG00000047424 #37 Cercopithecinae_d ANCESTRAL SPECIES 182 ENSGT01100000263522.A.d.a.a #15 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368.o #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 Sooty mangabey MODERN SPECIES 455 OR52E5 (ENSCATG00000031309) OR56B4 (ENSCATG00000030486) #15 C11orf42 (ENSCATG00000044386) #19 FHIP1B (ENSCATG00000035984) #20 CNGA4 (ENSCATG00000038185) #21 CCKBR (ENSCATG00000036051) #22 CAVIN3 (ENSCATG00000012570) #23 ENSCATG00000038288 SMPD1 (ENSCATG00000034780) #24 APBB1 (ENSCATG00000029612) #25 HPX (ENSCATG00000031965) #26 TRIM3 (ENSCATG00000029972) #27 ARFIP2 (ENSCATG00000035041) #28 TIMM10B (ENSCATG00000037555) #29 DNHD1 (ENSCATG00000033047) #30 RRP8 (ENSCATG00000029344) #31 ILK (ENSCATG00000041512) #32 ENSCATG00000037755 #33 TPP1 (ENSCATG00000036557) #34 DCHS1 (ENSCATG00000036519) #35 MRPL17 (ENSCATG00000035650) #36 Drill MODERN SPECIES 337 C11orf42 (ENSMLEG00000041851) #19 FHIP1B (ENSMLEG00000012027) #20 CNGA4 (ENSMLEG00000015992) #21 CCKBR (ENSMLEG00000040610) #22 CAVIN3 (ENSMLEG00000029092) #23 ENSMLEG00000031941 APBB1 (ENSMLEG00000029390) #25 HPX (ENSMLEG00000041528) #26 TRIM3 (ENSMLEG00000040156) #27 ARFIP2 (ENSMLEG00000025738) #28 TIMM10B (ENSMLEG00000038328) #29 DNHD1 (ENSMLEG00000037910) #30 RRP8 (ENSMLEG00000035110) #31 ILK (ENSMLEG00000032410) #32 ENSMLEG00000033680 #33 TPP1 (ENSMLEG00000037652) #34 DCHS1 (ENSMLEG00000035614) #35 MRPL17 (ENSMLEG00000040344) #36 Vervet Monkey MODERN SPECIES OR51B5 (ENSCSAG00000019346) OR51B6 (ENSCSAG00000019345) OR51M1 (ENSCSAG00000019344) OR51I2 (ENSCSAG00000019343) UBQLN3 (ENSCSAG00000019342) TRIM34 (ENSCSAG00000004285) TRIM5 (ENSCSAG00000004290) TRIM22 (ENSCSAG00000004294) OR52N4 (ENSCSAG00000019341) ##8 OR56A4 (ENSCSAG00000019340) OR56A1 (ENSCSAG00000019339) OR52W1 (ENSCSAG00000019338) #18 C11orf42 (ENSCSAG00000004302) #19 FHIP1B (ENSCSAG00000004304) #20 CNGA4 (ENSCSAG00000004310) #21 CCKBR (ENSCSAG00000004311) #22 CAVIN3 (ENSCSAG00000004312) #23 SMPD1 (ENSCSAG00000004314) #24 APBB1 (ENSCSAG00000004315) #25 HPX (ENSCSAG00000004319) #26 TRIM3 (ENSCSAG00000004321) #27 ARFIP2 (ENSCSAG00000004324) #28 TIMM10B (ENSCSAG00000004326) #29 DNHD1 (ENSCSAG00000004338) #30 RRP8 (ENSCSAG00000004345) #31 ILK (ENSCSAG00000004353) #32 TAF10 (ENSCSAG00000004349) #33 TPP1 (ENSCSAG00000004358) #34 DCHS1 (ENSCSAG00000004365) #35 MRPL17 (ENSCSAG00000004367) #36 OR2AG2 (ENSCSAG00000019337) #37 Rhinopithecus ANCESTRAL SPECIES 253 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260045.C.e.a.a.a.b.b.b.a Black snub-nosed monkey MODERN SPECIES 1151 C11orf42 (ENSRBIG00000033852) #19 FHIP1B (ENSRBIG00000028050) #20 CNGA4 (ENSRBIG00000040192) #21 CCKBR (ENSRBIG00000031995) #22 CAVIN3 (ENSRBIG00000036139) #23 ENSRBIG00000034076 SMPD1 (ENSRBIG00000036543) #24 APBB1 (ENSRBIG00000036551) #25 HPX (ENSRBIG00000039947) #26 TRIM3 (ENSRBIG00000028885) #27 ARFIP2 (ENSRBIG00000039580) #28 TIMM10B (ENSRBIG00000042907) #29 DNHD1 (ENSRBIG00000037352) #30 RRP8 (ENSRBIG00000044485) #31 ILK (ENSRBIG00000034316) #32 TAF10 (ENSRBIG00000041663) #33 TPP1 (ENSRBIG00000032478) #34 DCHS1 (ENSRBIG00000031623) #35 MRPL17 (ENSRBIG00000040233) #36 Golden snub-nosed monkey MODERN SPECIES 2435 OR56B4 (ENSRROG00000031373) #15 OR52B2 (ENSRROG00000038902) #17 C11orf42 (ENSRROG00000037779) #19 FHIP1B (ENSRROG00000000278) #20 CNGA4 (ENSRROG00000040654) #21 CCKBR (ENSRROG00000026722) #22 CAVIN3 (ENSRROG00000012641) #23 ENSRROG00000037814 SMPD1 (ENSRROG00000040466) #24 APBB1 (ENSRROG00000045560) #25 HPX (ENSRROG00000036557) #26 TRIM3 (ENSRROG00000039811) #27 ARFIP2 (ENSRROG00000036491) #28 TIMM10B (ENSRROG00000030921) #29 DNHD1 (ENSRROG00000038148) #30 RRP8 (ENSRROG00000045322) #31 ILK (ENSRROG00000028239) #32 TAF10 (ENSRROG00000043862) #33 TPP1 (ENSRROG00000040815) #34 DCHS1 (ENSRROG00000039837) #35 MRPL17 (ENSRROG00000032283) #36 Platyrrhini ANCESTRAL SPECIES 3 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.a.a.a.a.q ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a ENSGT00940000162834 #12 ENSGT00940000161235.b ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Cebidae ANCESTRAL SPECIES ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.a.a.a.a.q ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a ENSGT00940000162834 #12 ENSGT00940000161235.b ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b.l.b #37 Cebidae_a ANCESTRAL SPECIES 10 ENSGT01100000263522.A.d.a.b #7 ENSGT01100000263528.D.c.b.b.a ##8 ENSGT01100000263528.D.c.a.b ##8 ENSGT01090000260056.a.a.a.a.a.a.a.a.q ENSGT01090000260056.a.a.a.a.a.a.a.a.r.a ENSGT00940000162834 #12 ENSGT00940000161235.b ENSGT00940000163046.n ENSGT00940000163046.o ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b Capuchin MODERN SPECIES 370 TRIM22 (ENSCCAG00000023812) ENSCCAG00000030713 ##8 ENSCCAG00000024079 ##8 OR56B1 (ENSCCAG00000030480) #7 OR52N4 (ENSCCAG00000032323) ##8 OR52N5 (ENSCCAG00000029441) ##8 OR52E6 (ENSCCAG00000021394) OR56A5 (ENSCCAG00000016986) #12 OR56A4 (ENSCCAG00000010692) ENSCCAG00000024805 OR52L1 (ENSCCAG00000019360) #14 OR56B4 (ENSCCAG00000029354) #15 C11orf42 (ENSCCAG00000021656) #19 CNGA4 (ENSCCAG00000024781) #21 FHIP1B (ENSCCAG00000032468) #20 CCKBR (ENSCCAG00000037130) #22 CAVIN3 (ENSCCAG00000026196) #23 SMPD1 (ENSCCAG00000015662) #24 APBB1 (ENSCCAG00000036812) #25 HPX (ENSCCAG00000037567) #26 TRIM3 (ENSCCAG00000022507) #27 ARFIP2 (ENSCCAG00000022412) #28 TIMM10B (ENSCCAG00000020901) #29 DNHD1 (ENSCCAG00000021762) #30 RRP8 (ENSCCAG00000035197) #31 ILK (ENSCCAG00000031007) #32 TAF10 (ENSCCAG00000034043) #33 TPP1 (ENSCCAG00000036940) #34 DCHS1 (ENSCCAG00000029695) #35 MRPL17 (ENSCCAG00000025049) #36 OR6A2 (ENSCCAG00000032315) Bolivian squirrel monkey MODERN SPECIES 50 TRIM22 (ENSSBOG00000022819) ENSSBOG00000030485 ##8 OR52N4 (ENSSBOG00000016424) ##8 OR52N5 (ENSSBOG00000031383) ##8 ENSSBOG00000018211 OR52E6 (ENSSBOG00000022828) OR56A5 (ENSSBOG00000033646) #12 OR56A4 (ENSSBOG00000034881) OR56A1 (ENSSBOG00000008726) ENSSBOG00000035874 ENSSBOG00000035156 #14 OR52W1 (ENSSBOG00000025295) #18 C11orf42 (ENSSBOG00000033456) #19 FHIP1B (ENSSBOG00000033927) #20 CNGA4 (ENSSBOG00000026834) #21 CCKBR (ENSSBOG00000035850) #22 CAVIN3 (ENSSBOG00000034305) #23 Marmoset MODERN SPECIES 2 OR56B1 (ENSCJAG00000002543) #7 OR52N4 (ENSCJAG00000002547) ##8 OR52N2 (ENSCJAG00000021777) #11 ENSCJAG00000077158 ENSCJAG00000045999 OR52E4 (ENSCJAG00000023286) OR56A5 (ENSCJAG00000048276) #12 ENSCJAG00000070215 #14 OR56A4 (ENSCJAG00000079530) OR56A1 (ENSCJAG00000085124) ENSCJAG00000071880 #14 FHIP1B (ENSCJAG00000014340) #20 OR52W1 (ENSCJAG00000022245) #18 C11orf42 (ENSCJAG00000014410) #19 CNGA4 (ENSCJAG00000014312) #21 CCKBR (ENSCJAG00000014292) #22 CAVIN3 (ENSCJAG00000038304) #23 SMPD1 (ENSCJAG00000014259) #24 APBB1 (ENSCJAG00000014145) #25 HPX (ENSCJAG00000014134) #26 TRIM3 (ENSCJAG00000014089) #27 ARFIP2 (ENSCJAG00000014059) #28 TIMM10B (ENSCJAG00000073590) #29 ENSCJAG00000068805 #30 RRP8 (ENSCJAG00000014012) #31 ILK (ENSCJAG00000013968) #32 TAF10 (ENSCJAG00000013950) #33 TPP1 (ENSCJAG00000013870) #34 DCHS1 (ENSCJAG00000013828) #35 MRPL17 (ENSCJAG00000082791) #36 OR2AG2 (ENSCJAG00000054604) #37 Mas night monkey MODERN SPECIES 830 OR52N4 (ENSANAG00000016362) ##8 OR52N5 (ENSANAG00000027704) ##8 OR52N2 (ENSANAG00000015694) #11 ENSANAG00000011932 OR52E6 (ENSANAG00000020831) ENSANAG00000027487 OR56A4 (ENSANAG00000021719) OR56A1 (ENSANAG00000014070) ENSANAG00000022341 OR52L1 (ENSANAG00000017974) #14 OR56B4 (ENSANAG00000014116) #15 OR52W1 (ENSANAG00000017871) #18 C11orf42 (ENSANAG00000029081) #19 FHIP1B (ENSANAG00000035386) #20 CNGA4 (ENSANAG00000024797) #21 CCKBR (ENSANAG00000021245) #22 CAVIN3 (ENSANAG00000026725) #23 ENSANAG00000029210 SMPD1 (ENSANAG00000028051) #24 APBB1 (ENSANAG00000029393) #25 HPX (ENSANAG00000033788) #26 TRIM3 (ENSANAG00000027696) #27 ARFIP2 (ENSANAG00000031060) #28 TIMM10B (ENSANAG00000024296) #29 ENSANAG00000027422 #30 ENSANAG00000029690 RRP8 (ENSANAG00000028524) #31 ILK (ENSANAG00000005387) #32 TAF10 (ENSANAG00000036461) #33 TPP1 (ENSANAG00000021142) #34 DCHS1 (ENSANAG00000034179) #35 Tarsier MODERN SPECIES 5594 OR56A4 (ENSTSYG00000027316) OR52L1 (ENSTSYG00000013574) #14 ENSTSYG00000037069 #16 CUNH11orf42 (ENSTSYG00000001725) #19 FAM160A2 (ENSTSYG00000001738) #20 CNGA4 (ENSTSYG00000000649) #21 CCKBR (ENSTSYG00000000653) #22 CAVIN3 (ENSTSYG00000027837) #23 SMPD1 (ENSTSYG00000031193) #24 APBB1 (ENSTSYG00000026012) #25 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT01090000260056.a.a.a.a.a.a.a.a.r ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Lemuriformes ANCESTRAL SPECIES 16 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.a.a.a.a.q ENSGT01090000260056.a.a.a.a.a.a.a.a.r ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Mouse lemur MODERN SPECIES 27 ENSMICG00000044545 ##16 TRIM6 (ENSMICG00000005107) ENSMICG00000010972 TRIM34 (ENSMICG00000037370) ENSMICG00000047018 ENSMICG00000029455 ##16 OR52N2 (ENSMICG00000041593) #11 ENSMICG00000043976 ENSMICG00000046872 OR56A5 (ENSMICG00000002064) #12 OR56B4 (ENSMICG00000007227) #15 OR56A4 (ENSMICG00000045298) C11orf42 (ENSMICG00000033046) #19 FHIP1B (ENSMICG00000007239) #20 CNGA4 (ENSMICG00000044379) #21 CCKBR (ENSMICG00000007249) #22 CAVIN3 (ENSMICG00000002084) #23 SMPD1 (ENSMICG00000002085) #24 APBB1 (ENSMICG00000038165) #25 HPX (ENSMICG00000046239) #26 TRIM3 (ENSMICG00000002100) #27 ARFIP2 (ENSMICG00000045534) #28 TIMM10B (ENSMICG00000002107) #29 DNHD1 (ENSMICG00000030707) #30 RRP8 (ENSMICG00000038472) #31 ILK (ENSMICG00000002134) #32 TPP1 (ENSMICG00000002141) #34 DCHS1 (ENSMICG00000002145) #35 MRPL17 (ENSMICG00000035814) #36 ENSMICG00000041707 ENSMICG00000032984 Lemuriformes_a ANCESTRAL SPECIES 24 ENSGT01100000263528.B.b ##8 ENSGT01100000263528.C ##8 ENSGT01100000263522.A.d.a.b #7 ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000259995.a.b #37 Greater bamboo lemur MODERN SPECIES 1758 OR56A5 (ENSPSMG00000014047) #12 OR56A4 (ENSPSMG00000014037) OR56A1 (ENSPSMG00000014029) OR52L1 (ENSPSMG00000014025) #14 ENSPSMG00000014021 #13 OR56B4 (ENSPSMG00000014015) #15 ENSPSMG00000014006 #15 ENSPSMG00000013996 #16 ENSPSMG00000013987 OR52B2 (ENSPSMG00000013982) #17 OR52W1 (ENSPSMG00000013976) #18 C11orf42 (ENSPSMG00000013975) #19 FHIP1B (ENSPSMG00000013937) #20 CNGA4 (ENSPSMG00000013891) #21 CCKBR (ENSPSMG00000013879) #22 CAVIN3 (ENSPSMG00000013862) #23 Coquerels sifaka MODERN SPECIES 591 TRIM6 (ENSPCOG00000014255) TRIM34 (ENSPCOG00000018651) TRIM5 (ENSPCOG00000004953) ENSPCOG00000023676 ##8 OR56B1 (ENSPCOG00000016382) #7 OR52N5 (ENSPCOG00000028028) ##8 OR56B2P (ENSPCOG00000015037) #9 ENSPCOG00000009864 ENSPCOG00000013767 OR56A5 (ENSPCOG00000008705) #12 OR56B4 (ENSPCOG00000012441) #15 C11orf42 (ENSPCOG00000010802) #19 FHIP1B (ENSPCOG00000027027) #20 CNGA4 (ENSPCOG00000022762) #21 CCKBR (ENSPCOG00000015365) #22 CAVIN3 (ENSPCOG00000010757) #23 SMPD1 (ENSPCOG00000024226) #24 APBB1 (ENSPCOG00000013017) #25 HPX (ENSPCOG00000022166) #26 TRIM3 (ENSPCOG00000015790) #27 ARFIP2 (ENSPCOG00000005594) #28 TIMM10B (ENSPCOG00000021820) #29 DNHD1 (ENSPCOG00000023555) #30 RRP8 (ENSPCOG00000024627) #31 ILK (ENSPCOG00000019092) #32 TAF10 (ENSPCOG00000026313) #33 TPP1 (ENSPCOG00000024177) #34 DCHS1 (ENSPCOG00000019695) #35 ENSPCOG00000014817 #36 ENSPCOG00000012759 Bushbaby MODERN SPECIES 116 ENSOGAG00000015337 OR56A5 (ENSOGAG00000030397) #12 OR56A4 (ENSOGAG00000026929) ENSOGAG00000027204 OR52L1 (ENSOGAG00000015345) #14 ENSOGAG00000028437 #13 ENSOGAG00000026746 #15 ENSOGAG00000024676 #15 ENSOGAG00000024791 #15 ENSOGAG00000002769 #16 OR52B2 (ENSOGAG00000026381) #17 OR52W1 (ENSOGAG00000001400) #18 C11orf42 (ENSOGAG00000006503) #19 FHIP1B (ENSOGAG00000002770) #20 CNGA4 (ENSOGAG00000002772) #21 CCKBR (ENSOGAG00000002773) #22 CAVIN3 (ENSOGAG00000027618) #23 SMPD1 (ENSOGAG00000002779) #24 APBB1 (ENSOGAG00000002781) #25 HPX (ENSOGAG00000002783) #26 TRIM3 (ENSOGAG00000027002) #27 ARFIP2 (ENSOGAG00000002785) #28 TIMM10B (ENSOGAG00000033332) #29 DNHD1 (ENSOGAG00000030169) #30 RRP8 (ENSOGAG00000007184) #31 ILK (ENSOGAG00000007187) #32 TAF10 (ENSOGAG00000027347) #33 TPP1 (ENSOGAG00000007194) #34 DCHS1 (ENSOGAG00000024231) #35 MRPL17 (ENSOGAG00000014856) #36 ENSOGAG00000012320 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000155550.a.a.a ENSGT00940000155550.b ENSGT00940000155550.a.b ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000155550.a.a.a.b.a ENSGT00940000155550.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000155550.a.a.a.b.a.b ENSGT00940000155550.b ENSGT00940000155550.a.a.a.b.a.a ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Suina ANCESTRAL SPECIES 5 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.a.a.b.b ENSGT00940000155550.a.a.a.b.a.a ENSGT00940000161235 ENSGT00940000162834.b #12 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Chacoan peccary MODERN SPECIES 806 OR52N1 (ENSCWAG00000008246) #10 ENSCWAG00000008203 ##8 OR52N2 (ENSCWAG00000008188) #11 OR52E4 (ENSCWAG00000008174) ENSCWAG00000008111 ENSCWAG00000008000 OR56A4 (ENSCWAG00000007972) OR56A5 (ENSCWAG00000007936) #12 OR52L1 (ENSCWAG00000007913) #14 OR56B4 (ENSCWAG00000007897) #15 OR52B2 (ENSCWAG00000007836) #17 OR52W1 (ENSCWAG00000007826) #18 C11orf42 (ENSCWAG00000007795) #19 FHIP1B (ENSCWAG00000007758) #20 CNGA4 (ENSCWAG00000007678) #21 CCKBR (ENSCWAG00000007627) #22 CAVIN3 (ENSCWAG00000007603) #23 SMPD1 (ENSCWAG00000007592) #24 APBB1 (ENSCWAG00000007254) #25 HPX (ENSCWAG00000007168) #26 TRIM3 (ENSCWAG00000007097) #27 ARFIP2 (ENSCWAG00000007031) #28 ENSCWAG00000007002 #29 ENSCWAG00000006966 #30 ENSCWAG00000006941 #30 RRP8 (ENSCWAG00000006892) #31 ILK (ENSCWAG00000006809) #32 TAF10 (ENSCWAG00000006764) #33 TPP1 (ENSCWAG00000006176) #34 DCHS1 (ENSCWAG00000006103) #35 MRPL17 (ENSCWAG00000006082) #36 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000155550.a.a.a.b.a.b ENSGT00940000155550.b ENSGT00940000155550.a.a.a.b.a.a ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000155550.a.a.a.b.a.b ENSGT00940000155550.b ENSGT00940000155550.a.a.a.b.a.a ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Cetacea ANCESTRAL SPECIES 4 ENSGT01090000259999.G.a.b.b.b ENSGT01090000259999.G.a.b.a ENSGT00940000156216 ENSGT00940000163476 ENSGT00940000164934 ENSGT00940000162659 ENSGT00390000010849.d ENSGT00940000162912 ENSGT00940000162320 ENSGT00940000163021 ENSGT00940000163046 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Odontoceti ANCESTRAL SPECIES 4 ENSGT01090000259999.G.a.b.a ENSGT00940000156216 ENSGT00940000163476 ENSGT00940000164934 ENSGT00940000162659 ENSGT00390000010849.d ENSGT00940000162912 ENSGT00940000162320 ENSGT00940000163021 ENSGT01090000260056.a.a.a.b ENSGT00940000163046 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Odontoceti_a ANCESTRAL SPECIES 4 ENSGT01090000259999.G.a.b.b.b ENSGT00940000156216 ENSGT00940000163476 ENSGT00940000164934 ENSGT00940000162659 ENSGT00390000010849.d ENSGT00940000162912 ENSGT00940000162320 ENSGT00940000163021 ENSGT01090000260056.a.a.a.b ENSGT00940000163046 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326.e.a #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Odontoceti_b ANCESTRAL SPECIES 4 ENSGT01090000259999.G.a.b.b.b ENSGT00940000156216 ENSGT00940000163476 ENSGT00940000164934 ENSGT00940000162659 ENSGT00390000010849.d ENSGT00940000162912 ENSGT00940000162320 ENSGT00940000163021 ENSGT01090000260056.a.a.a.b ENSGT00940000163046 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326.e.a #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Monodontidae ANCESTRAL SPECIES 2 ENSGT01090000259999.F.b ENSGT01100000263490.D.a.a ENSGT01090000259999.G.a.b.b.b ENSGT00940000164934 ENSGT00940000156216 ENSGT00390000010849.d ENSGT00940000162912 ENSGT00940000162320 ENSGT00940000163021 ENSGT01090000260056.a.a.a.b ENSGT00940000163046 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326.f #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Narwhal MODERN SPECIES 314 TRIM68 (ENSMMNG00015019932) OR51E1 (ENSMMNG00015019946) ENSMMNG00015019953 OR51E2 (ENSMMNG00015019972) OR51C1P (ENSMMNG00015019985) ENSMMNG00015020038 ENSMMNG00015020056 ENSMMNG00015020074 TRIM6 (ENSMMNG00015020115) OR52E5 (ENSMMNG00015020236) OR56A1 (ENSMMNG00015020363) ENSMMNG00015020385 #18 C11orf42 (ENSMMNG00015020393) #19 FHIP1B (ENSMMNG00015020418) #20 CNGA4 (ENSMMNG00015020435) #21 CCKBR (ENSMMNG00015020463) #22 CAVIN3 (ENSMMNG00015020494) #23 SMPD1 (ENSMMNG00015020508) #24 APBB1 (ENSMMNG00015020560) #25 HPX (ENSMMNG00015020670) #26 TRIM3 (ENSMMNG00015020709) #27 ARFIP2 (ENSMMNG00015020778) #28 TIMM10B (ENSMMNG00015020885) #29 ENSMMNG00015020897 #30 ENSMMNG00015020913 #30 RRP8 (ENSMMNG00015020987) #31 ILK (ENSMMNG00015021024) #32 TAF10 (ENSMMNG00015021052) #33 TPP1 (ENSMMNG00015021098) #34 DCHS1 (ENSMMNG00015021194) #35 MRPL17 (ENSMMNG00015021208) #36 Beluga whale MODERN SPECIES 32 TRIM68 (ENSDLEG00000010920) OR51E1 (ENSDLEG00000010913) ENSDLEG00000010869 OR51E2 (ENSDLEG00000010857) OR51C1P (ENSDLEG00000010851) ENSDLEG00000010836 ENSDLEG00000010815 ENSDLEG00000010789 UBQLN3 (ENSDLEG00000010777) ENSDLEG00000010767 ENSDLEG00000010761 OR52E5 (ENSDLEG00000010335) CUNH11orf42 (ENSDLEG00000010253) #19 FHIP1B (ENSDLEG00000010190) #20 CNGA4 (ENSDLEG00000010161) #21 CCKBR (ENSDLEG00000010143) #22 CAVIN3 (ENSDLEG00000010130) #23 SMPD1 (ENSDLEG00000010112) #24 APBB1 (ENSDLEG00000010059) #25 HPX (ENSDLEG00000010022) #26 TRIM3 (ENSDLEG00000009966) #27 ARFIP2 (ENSDLEG00000009934) #28 TIMM10B (ENSDLEG00000009915) DNHD1 (ENSDLEG00000009780) #30 RRP8 (ENSDLEG00000009753) #31 ILK (ENSDLEG00000009725) #32 TAF10 (ENSDLEG00000009705) #33 TPP1 (ENSDLEG00000009681) #34 DCHS1 (ENSDLEG00000009642) #35 MRPL17 (ENSDLEG00000009624) #36 ENSDLEG00000009619 Vaquita MODERN SPECIES 19 OR51E2 (ENSPSNG00000008079) OR51C1P (ENSPSNG00000008140) ENSPSNG00000008580 ENSPSNG00000008599 ENSPSNG00000008643 ENSPSNG00000008742 ENSPSNG00000008775 UBQLN3 (ENSPSNG00000008813) TRIM6 (ENSPSNG00000008858) OR52E5 (ENSPSNG00000009098) OR56A1 (ENSPSNG00000009172) OR52W1 (ENSPSNG00000009250) #18 C11orf42 (ENSPSNG00000009276) #19 FHIP1B (ENSPSNG00000009310) #20 CNGA4 (ENSPSNG00000009358) #21 CCKBR (ENSPSNG00000009408) #22 CAVIN3 (ENSPSNG00000009468) #23 SMPD1 (ENSPSNG00000009506) #24 APBB1 (ENSPSNG00000009577) #25 HPX (ENSPSNG00000009822) #26 TRIM3 (ENSPSNG00000010005) #27 ARFIP2 (ENSPSNG00000010197) #28 TIMM10B (ENSPSNG00000010365) #29 ENSPSNG00000010407 #30 ENSPSNG00000010483 #30 RRP8 (ENSPSNG00000010553) #31 ILK (ENSPSNG00000010650) #32 TAF10 (ENSPSNG00000010753) #33 TPP1 (ENSPSNG00000010870) #34 DCHS1 (ENSPSNG00000011160) #35 MRPL17 (ENSPSNG00000011239) #36 Dolphin MODERN SPECIES 2218 OR52E5 (ENSTTRG00000006694) C11orf42 (ENSTTRG00000006711) #19 FHIP1B (ENSTTRG00000006717) #20 CNGA4 (ENSTTRG00000006723) #21 CCKBR (ENSTTRG00000006726) #22 Blue whale MODERN SPECIES 19 OR51E1 (ENSBMSG00010021284) OR51E2 (ENSBMSG00010021292) OR51C1P (ENSBMSG00010021297) ENSBMSG00010021324 ENSBMSG00010021397 ENSBMSG00010021411 ENSBMSG00010021419 ENSBMSG00010021427 OR52B6 (ENSBMSG00010021493) ##16 UBQLN3 (ENSBMSG00010021714) TRIM6 (ENSBMSG00010021719) FHIP1B (ENSBMSG00010021760) #20 OR52W1 (ENSBMSG00010021771) #18 C11orf42 (ENSBMSG00010021773) #19 CNGA4 (ENSBMSG00010021778) #21 CCKBR (ENSBMSG00010021785) #22 CAVIN3 (ENSBMSG00010021788) #23 SMPD1 (ENSBMSG00010021791) #24 APBB1 (ENSBMSG00010021805) #25 HPX (ENSBMSG00010021835) #26 TRIM3 (ENSBMSG00010021846) #27 ARFIP2 (ENSBMSG00010021854) #28 TIMM10B (ENSBMSG00010021864) #29 ENSBMSG00010021866 #30 ENSBMSG00010021870 #30 RRP8 (ENSBMSG00010021876) #31 ILK (ENSBMSG00010021882) #32 TAF10 (ENSBMSG00010021888) #33 TPP1 (ENSBMSG00010021892) #34 MRPL17 (ENSBMSG00010021925) #36 ENSBMSG00010021930 Pecora ANCESTRAL SPECIES 7 ENSGT00940000155550.a.a.a.b.a.a.a.a ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235.i ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.gb.a Percora_a ANCESTRAL SPECIES 6 ENSGT00940000155550.a.a.a.b.a.a.a.a ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235.i ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.gb.a Bovidae ANCESTRAL SPECIES 6 ENSGT00940000155550.a.a.a.b.a.a.a.a ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235.i ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT00390000015164.t ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.gb.a Bovinae ANCESTRAL SPECIES 21 ENSGT00940000155550.b ENSGT00940000155550.a.a.a.b.a.a.a.a ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235.i ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT00390000015164.t ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00940000161841.i.a.b.b.a ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698.m #36 American bison MODERN SPECIES 3040 OR56B4 (ENSBBBG00000014571) #15 OR52B2 (ENSBBBG00000003481) #17 OR52W1 (ENSBBBG00000014577) #18 FHIP1B (ENSBBBG00000014602) #20 ENSBBBG00000014611 #21 CCKBR (ENSBBBG00000003534) #22 CAVIN3 (ENSBBBG00000014634) #23 ENSBBBG00000014648 SMPD1 (ENSBBBG00000014666) #24 APBB1 (ENSBBBG00000001181) #25 HPX (ENSBBBG00000001132) #26 TRIM3 (ENSBBBG00000001061) #27 ARFIP2 (ENSBBBG00000000936) #28 TIMM10B (ENSBBBG00000000916) #29 ENSBBBG00000000903 #30 ENSBBBG00000000894 #30 RRP8 (ENSBBBG00000000870) #31 ILK (ENSBBBG00000003685) #32 TAF10 (ENSBBBG00000014932) #33 TPP1 (ENSBBBG00000000805) #34 DCHS1 (ENSBBBG00000015059) #35 Bos ANCESTRAL SPECIES 20 ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235.i ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a.r.b #14 ENSGT01090000260013.b.a.a.a.a.r.a #14 ENSGT01100000263522.A.d.a.a.w #15 ENSGT00390000015164.t ENSGT01100000263522.A.d.a.a.v #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00990000210921 ENSGT01100000263518.C ENSGT00950000182910.a.a.b #23 ENSGT00940000161841.i.a.b.b.a ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326.g #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 Bos_a ANCESTRAL SPECIES 15 ENSGT00940000155550.a.a.a.b.a.b ENSGT00940000155550.b ENSGT00940000155550.a.a.a.b.a.a.a.a ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235.i ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a.q #14 ENSGT01090000260013.b.a.a.a.a.r.a #14 ENSGT01100000263522.A.d.a.a.v.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00990000210921 ENSGT00950000182910.a.a.b #23 ENSGT00940000161841.i.a.b.b.a ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326.g #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 Domestic yak MODERN SPECIES 4 ENSBGRG00000013567 ENSBGRG00000013591 ENSBGRG00000013612 ENSBGRG00000013620 OR56A5 (ENSBGRG00000013637) #12 ENSBGRG00000013653 OR56A1 (ENSBGRG00000013755) ENSBGRG00000013784 #14 ENSBGRG00000013812 #14 OR56B4 (ENSBGRG00000013867) #15 OR52B2 (ENSBGRG00000013876) #17 OR52W1 (ENSBGRG00000013895) #18 C11orf42 (ENSBGRG00000013913) #19 FHIP1B (ENSBGRG00000013943) #20 CNGA4 (ENSBGRG00000014037) #21 CCKBR (ENSBGRG00000014135) #22 ENSBGRG00000014283 CAVIN3 (ENSBGRG00000014340) #23 ENSBGRG00000014363 SMPD1 (ENSBGRG00000014387) #24 APBB1 (ENSBGRG00000014498) #25 HPX (ENSBGRG00000015205) #26 TRIM3 (ENSBGRG00000015323) #27 ARFIP2 (ENSBGRG00000015468) #28 ENSBGRG00000003659 #29 ENSBGRG00000003674 #29 ENSBGRG00000003719 #30 ENSBGRG00000003732 #30 RRP8 (ENSBGRG00000003778) #31 ILK (ENSBGRG00000003873) #32 TAF10 (ENSBGRG00000004125) #33 Caprinae ANCESTRAL SPECIES 6 ENSGT00940000155550.a.a.a.b.a.b ENSGT00940000155550.b ENSGT00940000155550.a.a.a.b.a.a.a.b ENSGT00940000162834.b #12 ENSGT00940000162834.a #12 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT00390000015164.t ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b.gb.a Rambouillet Sheep MODERN SPECIES 6 ENSOARG00020012647 ENSOARG00020012632 ENSOARG00020012611 ENSOARG00020012586 #12 ENSOARG00020012543 #12 ENSOARG00020012398 ENSOARG00020012365 #14 ENSOARG00020012321 #14 ENSOARG00020012290 ENSOARG00020012183 #15 OR52B2 (ENSOARG00020012155) #17 OR52W1 (ENSOARG00020012127) #18 C11orf42 (ENSOARG00020012085) #19 FHIP1B (ENSOARG00020011924) #20 CNGA4 (ENSOARG00020011776) #21 CCKBR (ENSOARG00020011613) #22 CAVIN3 (ENSOARG00020011566) #23 SMPD1 (ENSOARG00020011513) #24 APBB1 (ENSOARG00020010925) #25 HPX (ENSOARG00020010803) #26 TRIM3 (ENSOARG00020010605) #27 ARFIP2 (ENSOARG00020010185) #28 TIMM10B (ENSOARG00020010074) #29 ENSOARG00020009925 #30 ENSOARG00020009879 #30 RRP8 (ENSOARG00020009794) #31 ILK (ENSOARG00020009598) #32 TAF10 (ENSOARG00020009554) #33 TPP1 (ENSOARG00020009332) #34 DCHS1 (ENSOARG00020009176) #35 MRPL17 (ENSOARG00020009135) #36 Siberian musk deer MODERN SPECIES 1169 ENSMMSG00000021873 ENSMMSG00000021880 OR52E4 (ENSMMSG00000016298) ENSMMSG00000016314 ENSMMSG00000016332 ENSMMSG00000016375 #12 ENSMMSG00000016396 ENSMMSG00000016409 ENSMMSG00000016443 #13 OR56B4 (ENSMMSG00000016483) #15 ENSMMSG00000016509 #16 OR52B2 (ENSMMSG00000016533) #17 C11orf42 (ENSMMSG00000016546) #19 FHIP1B (ENSMMSG00000016594) #20 CNGA4 (ENSMMSG00000016696) #21 CCKBR (ENSMMSG00000016788) #22 ENSMMSG00000016868 CAVIN3 (ENSMMSG00000016891) #23 SMPD1 (ENSMMSG00000016910) #24 APBB1 (ENSMMSG00000016950) #25 HPX (ENSMMSG00000017419) #26 ENSMMSG00000017529 #27 ARFIP2 (ENSMMSG00000017622) #28 TIMM10B (ENSMMSG00000017727) #29 ENSMMSG00000017744 #30 ENSMMSG00000017805 #30 RRP8 (ENSMMSG00000017866) #31 ILK (ENSMMSG00000017911) #32 TAF10 (ENSMMSG00000017970) #33 TPP1 (ENSMMSG00000018032) #34 DCHS1 (ENSMMSG00000018170) #35 Camelidae ANCESTRAL SPECIES 70 ENSGT01100000263528.D.c.b.b.b.a.b.b ##8 ENSGT01100000263522.A.d.b #9 ENSGT01100000263528.D.c.a.a #10 ENSGT01100000263528.D.d.a.a #11 ENSGT01090000260056.a.a.a.a.a.a.a.a ENSGT01090000260056.a.a.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Arabian camel MODERN SPECIES 1 ENSCDRG00005000159 ##8 ENSCDRG00005000154 #8 ENSCDRG00005000131 ##8 OR56B2P (ENSCDRG00005000121) #9 OR52N1 (ENSCDRG00005016404) #10 OR52N2 (ENSCDRG00005016395) #11 OR56A4 (ENSCDRG00005016330) OR56A1 (ENSCDRG00005016269) OR56B4 (ENSCDRG00005016239) #15 ENSCDRG00005016213 #16 OR52B2 (ENSCDRG00005016204) #17 OR52W1 (ENSCDRG00005016196) #18 C11orf42 (ENSCDRG00005016166) #19 FHIP1B (ENSCDRG00005016093) #20 CNGA4 (ENSCDRG00005015962) #21 CCKBR (ENSCDRG00005015928) #22 ENSCDRG00005015890 #23 SMPD1 (ENSCDRG00005015860) #24 APBB1 (ENSCDRG00005015508) #25 HPX (ENSCDRG00005015442) #26 TRIM3 (ENSCDRG00005015334) #27 ARFIP2 (ENSCDRG00005015094) #28 TIMM10B (ENSCDRG00005015056) #29 ENSCDRG00005015025 #30 ENSCDRG00005015000 #30 RRP8 (ENSCDRG00005014917) #31 ILK (ENSCDRG00005014817) #32 TAF10 (ENSCDRG00005014764) #33 TPP1 (ENSCDRG00005014509) #34 DCHS1 (ENSCDRG00005014203) #35 MRPL17 (ENSCDRG00005014149) #36 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000155550.b ENSGT00940000155550.a.a.a.a ENSGT00940000155550.a.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000162834.b #12 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Equus ANCESTRAL SPECIES 40 ENSGT01090000260013.b.a.a.a.a.y #14 ENSGT01100000263522.A.d.a.a.x.a #15 ENSGT01100000263522.A.d.a.a.x.b #15 ENSGT01090000260013.b.a.a.a.a.z #14 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.a Donkey MODERN SPECIES 12 ENSEASG00005001612 ENSEASG00005001616 ENSEASG00005001618 ENSEASG00005025145 #9 ENSEASG00005030172 ENSEASG00005029391 ENSEASG00005001628 #14 ENSEASG00005029144 #15 ENSEASG00005023561 #15 ENSEASG00005001634 #14 ENSEASG00005001641 #17 FHIP1B (ENSEASG00005001645) #20 OR52W1 (ENSEASG00005001640) #18 C11orf42 (ENSEASG00005001643) #19 CNGA4 (ENSEASG00005001650) #21 CCKBR (ENSEASG00005001654) #22 CAVIN3 (ENSEASG00005024523) #23 SMPD1 (ENSEASG00005001666) #24 APBB1 (ENSEASG00005001670) #25 HPX (ENSEASG00005001677) #26 TRIM3 (ENSEASG00005001692) #27 ARFIP2 (ENSEASG00005001702) #28 TIMM10B (ENSEASG00005032667) #29 ENSEASG00005029985 #30 ENSEASG00005001731 #30 RRP8 (ENSEASG00005001761) #31 ILK (ENSEASG00005001817) #32 TAF10 (ENSEASG00005002262) #33 TPP1 (ENSEASG00005002355) #34 DCHS1 (ENSEASG00005003085) #35 ENSEASG00005029274 #36 Horse MODERN SPECIES 28 OR52N4 (ENSECAG00000037675) ##8 OR52N4J (ENSECAG00000033922) #8 OR56B2I (ENSECAG00000005238) #9 ENSECAG00000033556 OR56A3 (ENSECAG00000005353) OR56B2 (ENSECAG00000005522) #9 OR56A4F (ENSECAG00000005004) OR56A1 (ENSECAG00000005259) OR52L2 (ENSECAG00000005383) #14 OR56B46 (ENSECAG00000028421) #15 OR56B45 (ENSECAG00000031453) #15 FHIP1B (ENSECAG00000009644) #20 C7H11orf42 (ENSECAG00000009630) #19 OR52W1 (ENSECAG00000000822) #18 CNGA4 (ENSECAG00000011616) #21 CCKBR (ENSECAG00000012751) #22 CAVIN3 (ENSECAG00000000857) #23 SMPD1 (ENSECAG00000012877) #24 APBB1 (ENSECAG00000014015) #25 HPX (ENSECAG00000016475) #26 TRIM3 (ENSECAG00000056285) #27 ARFIP2 (ENSECAG00000019888) #28 TIMM10B (ENSECAG00000000811) #29 DNHD1 (ENSECAG00000006457) #30 RRP8 (ENSECAG00000006612) #31 ILK (ENSECAG00000007599) #32 TAF10 (ENSECAG00000007794) #33 TPP1 (ENSECAG00000007829) #34 DCHS1 (ENSECAG00000009296) #35 MRPL17 (ENSECAG00000010156) #36 OR2AG2 (ENSECAG00000046473) #37 Chiroptera ANCESTRAL SPECIES 5 ENSGT01090000260056.a.a.a.a.a.a.a.a ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Megabat MODERN SPECIES 2446 ENSPVAG00000002401 #18 C11orf42 (ENSPVAG00000002403) #19 FHIP1B (ENSPVAG00000002405) #20 CNGA4 (ENSPVAG00000002406) #21 CCKBR (ENSPVAG00000002407) #22 CAVIN3 (ENSPVAG00000002408) #23 SMPD1 (ENSPVAG00000002410) #24 APBB1 (ENSPVAG00000002411) #25 HPX (ENSPVAG00000002413) #26 TRIM3 (ENSPVAG00000002414) #27 ARFIP2 (ENSPVAG00000002415) #28 ENSPVAG00000002416 #30 ENSPVAG00000002417 #30 ENSPVAG00000002419 #30 RRP8 (ENSPVAG00000002420) #31 ILK (ENSPVAG00000002421) #32 TAF10 (ENSPVAG00000002422) #33 TPP1 (ENSPVAG00000002423) #34 DCHS1 (ENSPVAG00000002424) #35 Microchiroptera ANCESTRAL SPECIES 2 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.b ENSGT00940000155550.a.b ENSGT00940000161235 ENSGT00940000162834.b #12 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01100000263528.A.a.a #18 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Microbat MODERN SPECIES 1075 ENSMLUG00000007017 #12 ENSMLUG00000007024 ENSMLUG00000006112 ENSMLUG00000009871 ENSMLUG00000022881 ENSMLUG00000028834 #12 OR56A1 (ENSMLUG00000011392) ENSMLUG00000011395 #14 ENSMLUG00000022733 #13 OR56B4 (ENSMLUG00000011402) #15 OR52W1 (ENSMLUG00000017443) #18 OR52B2 (ENSMLUG00000023626) #17 C11orf42 (ENSMLUG00000002101) #19 FHIP1B (ENSMLUG00000027682) #20 CNGA4 (ENSMLUG00000002105) #21 CCKBR (ENSMLUG00000012096) #22 Greater horseshoe bat MODERN SPECIES 2 ENSRFEG00010010480 ##8 ENSRFEG00010010448 ##8 ENSRFEG00010010413 ##8 OR52N2 (ENSRFEG00010010387) #11 ENSRFEG00010010362 ENSRFEG00010010341 OLR186 (ENSRFEG00010010321) OR56A5 (ENSRFEG00010005033) #12 OR56A4 (ENSRFEG00010005028) OR56A1 (ENSRFEG00010005024) OR52L1 (ENSRFEG00010005017) #14 ENSRFEG00010005009 #13 C11orf42 (ENSRFEG00010004994) #19 FHIP1B (ENSRFEG00010004978) #20 CNGA4 (ENSRFEG00010004967) #21 CCKBR (ENSRFEG00010004958) #22 CAVIN3 (ENSRFEG00010004945) #23 SMPD1 (ENSRFEG00010004931) #24 APBB1 (ENSRFEG00010004839) #25 HPX (ENSRFEG00010004759) #26 TRIM3 (ENSRFEG00010004738) #27 ARFIP2 (ENSRFEG00010004698) #28 TIMM10B (ENSRFEG00010004665) #29 DNHD1 (ENSRFEG00010004621) #30 RRP8 (ENSRFEG00010004563) #31 ILK (ENSRFEG00010004532) #32 TAF10 (ENSRFEG00010004513) #33 TPP1 (ENSRFEG00010004469) #34 DCHS1 (ENSRFEG00010004414) #35 MRPL17 (ENSRFEG00010004400) #36 ENSRFEG00010004390 Carnivora ANCESTRAL SPECIES 7 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.b ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Felidae ANCESTRAL SPECIES ENSGT01090000260056.a.a.a.b ENSGT00940000162834.a.d #12 ENSGT00940000155550.a.a.a.a.a.g ENSGT00940000155550.b ENSGT00940000155550.a.a.a.a.b.a ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956.a #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Panthera ANCESTRAL SPECIES 13 ENSGT00940000155550.a.a.a.a.a.g.a ENSGT00940000155550.b ENSGT00940000155550.a.a.a.a.b.a ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a.fb #14 ENSGT01100000263522.A.d.a.a.mb.b #15 ENSGT01090000260013.b.a.a.a.a.gb #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a.nb #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956.a #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Panthera_a ANCESTRAL SPECIES 20 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956.a #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b leopard MODERN SPECIES 29 OR52W1 (ENSPPRG00000015680) #18 C11orf42 (ENSPPRG00000012343) #19 FHIP1B (ENSPPRG00000011947) #20 CNGA4 (ENSPPRG00000011341) #21 CCKBR (ENSPPRG00000010661) #22 CAVIN3 (ENSPPRG00000009905) #23 SMPD1 (ENSPPRG00000009783) #24 APBB1 (ENSPPRG00000009133) #25 HPX (ENSPPRG00000012100) #26 TRIM3 (ENSPPRG00000011297) #27 ARFIP2 (ENSPPRG00000009679) #28 TIMM10B (ENSPPRG00000005816) #29 RRP8 (ENSPPRG00000022654) #31 ENSPPRG00000023135 #32 TAF10 (ENSPPRG00000024517) #33 TPP1 (ENSPPRG00000024708) #34 DCHS1 (ENSPPRG00000024944) #35 MRPL17 (ENSPPRG00000022075) #36 ENSPPRG00000021858 ENSPPRG00000021625 lion MODERN SPECIES 10 TRIM21 (ENSPLOG00000004998) ENSPLOG00000005015 ENSPLOG00000005026 ##8 ENSPLOG00000005036 ##7 ENSPLOG00000005041 OR52M1 (ENSPLOG00000005048) ##14 ENSPLOG00000005058 ##8 TRIM68 (ENSPLOG00000005070) OR51D1 (ENSPLOG00000005082) OR51E1 (ENSPLOG00000005093) OR52B2 (ENSPLOG00000005100) #17 OR52W1 (ENSPLOG00000005111) #18 C11orf42 (ENSPLOG00000005122) #19 FHIP1B (ENSPLOG00000005135) #20 CNGA4 (ENSPLOG00000005154) #21 CCKBR (ENSPLOG00000005180) #22 CAVIN3 (ENSPLOG00000005195) #23 SMPD1 (ENSPLOG00000005204) #24 APBB1 (ENSPLOG00000005250) #25 HPX (ENSPLOG00000005320) #26 TRIM3 (ENSPLOG00000005340) #27 ARFIP2 (ENSPLOG00000005392) #28 TIMM10B (ENSPLOG00000005443) #29 ENSPLOG00000005458 #30 ENSPLOG00000005475 #30 RRP8 (ENSPLOG00000005516) #31 ILK (ENSPLOG00000005569) #32 TAF10 (ENSPLOG00000005607) #33 TPP1 (ENSPLOG00000005678) #34 DCHS1 (ENSPLOG00000005833) #35 MRPL17 (ENSPLOG00000005883) #36 Tiger MODERN SPECIES 181 ENSPTIG00000015681 ENSPTIG00000010409 ENSPTIG00000010419 ENSPTIG00000010427 ENSPTIG00000010432 OR56A4 (ENSPTIG00000010444) OR56A1 (ENSPTIG00000016321) ENSPTIG00000010483 #14 ENSPTIG00000010491 #15 ENSPTIG00000010504 #14 ENSPTIG00000010508 #13 OR56B4 (ENSPTIG00000016548) #15 C11orf42 (ENSPTIG00000016741) #19 FHIP1B (ENSPTIG00000016853) #20 CNGA4 (ENSPTIG00000016994) #21 CCKBR (ENSPTIG00000017427) #22 ENSPTIG00000017623 #23 SMPD1 (ENSPTIG00000017641) #24 APBB1 (ENSPTIG00000017985) #25 HPX (ENSPTIG00000001773) #26 TRIM3 (ENSPTIG00000004799) #27 ARFIP2 (ENSPTIG00000006571) #28 TIMM10B (ENSPTIG00000008373) #29 RRP8 (ENSPTIG00000011321) #31 ILK (ENSPTIG00000012693) #32 TAF10 (ENSPTIG00000013604) #33 TPP1 (ENSPTIG00000013760) #34 DCHS1 (ENSPTIG00000014056) #35 MRPL17 (ENSPTIG00000014738) #36 ENSPTIG00000000970 ENSPTIG00000000981 #37 Cat MODERN SPECIES 241 OR52E5 (ENSFCAG00000046289) ENSFCAG00000042727 #12 ENSFCAG00000047749 ENSFCAG00000048797 ENSFCAG00000046369 #12 ENSFCAG00000052758 ENSFCAG00000041362 #15 OR56B4 (ENSFCAG00000007878) #15 ENSFCAG00000044555 #15 ENSFCAG00000030539 #17 ENSFCAG00000044362 #17 OR52W1 (ENSFCAG00000004625) #18 FHIP1B (ENSFCAG00000004626) #20 CD1H11orf42 (ENSFCAG00000023147) #19 CNGA4 (ENSFCAG00000023578) #21 CCKBR (ENSFCAG00000011695) #22 CAVIN3 (ENSFCAG00000033677) #23 APBB1 (ENSFCAG00000004628) #25 SMPD1 (ENSFCAG00000027196) #24 TRIM3 (ENSFCAG00000004634) #27 ARFIP2 (ENSFCAG00000004631) #28 TIMM10B (ENSFCAG00000004633) #29 DNHD1 (ENSFCAG00000024710) #30 RRP8 (ENSFCAG00000015384) #31 ILK (ENSFCAG00000015388) #32 ENSFCAG00000015390 #33 TPP1 (ENSFCAG00000015392) #34 MRPL17 (ENSFCAG00000036047) #36 ENSFCAG00000030203 ENSFCAG00000022056 ENSFCAG00000035461 #37 Caniformia ANCESTRAL SPECIES 25 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b Canidae ANCESTRAL SPECIES 17 ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT00940000161235.e ENSGT00940000155550.a.a.a.a.a.b.a ENSGT00940000155550.b ENSGT00940000155550.a.a.a.a.a.a ENSGT00940000155550.a.a.a.a.b.a ENSGT01090000260013.b.a.a.a.a.db #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000157524.b Canis_lupus ANCESTRAL SPECIES 21 ENSGT01090000260056.a.a.a.a.b ENSGT00940000161235.e ENSGT00940000155550.a.a.a.a.a.b.a ENSGT00940000155550.b ENSGT00940000155550.a.a.a.a.a.a ENSGT00940000155550.a.a.a.a.b.a ENSGT01100000263522.A.d.a.a.z #15 ENSGT01090000260013.b.a.a.a.a.db #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a.`b #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183030.m.a.a.b.b.a.b.a.a ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 Dog MODERN SPECIES 13 ENSCAFG00845006422 OR56A3D (ENSCAFG00845006454) ENSCAFG00845006594 #15 ENSCAFG00845006627 #12 OR56A1 (ENSCAFG00845006647) OR56A1B (ENSCAFG00845006673) OR52L2 (ENSCAFG00845006690) #14 OR52L1 (ENSCAFG00845006714) #14 cOR52X2 (ENSCAFG00845006734) #13 OR56B6 (ENSCAFG00845006785) #15 OR52B2 (ENSCAFG00845006808) #17 FAM160A2 (ENSCAFG00845006888) #20 OR52W1 (ENSCAFG00845007024) #18 C21H11orf42 (ENSCAFG00845007051) #19 CNGA4 (ENSCAFG00845007124) #21 CCKBR (ENSCAFG00845007238) #22 CAVIN3 (ENSCAFG00845007318) #23 ENSCAFG00845007351 SMPD1 (ENSCAFG00845007383) #24 APBB1 (ENSCAFG00845007672) #25 TRIM3 (ENSCAFG00845008173) #27 ARFIP2 (ENSCAFG00845008330) #28 TIMM10B (ENSCAFG00845008439) #29 ENSCAFG00845008482 #30 RRP8 (ENSCAFG00845008601) #31 ILK (ENSCAFG00845008689) #32 TAF10 (ENSCAFG00845008778) #33 TPP1 (ENSCAFG00845008889) #34 ENSCAFG00845009119 #35 ENSCAFG00845009270 OR2D37 (ENSCAFG00845009291) Dingo MODERN SPECIES 231 ENSCAFG00020009456 ENSCAFG00020009458 ENSCAFG00020009459 OR56A5 (ENSCAFG00020009463) #12 ENSCAFG00020009465 OR56A1 (ENSCAFG00020009469) ENSCAFG00020009481 #15 ENSCAFG00020009483 #14 ENSCAFG00020009485 #13 ENSCAFG00020009489 #15 OR52B2 (ENSCAFG00020009491) #17 OR52W1 (ENSCAFG00020009494) #18 C11orf42 (ENSCAFG00020009498) #19 FHIP1B (ENSCAFG00020009500) #20 CNGA4 (ENSCAFG00020009508) #21 CCKBR (ENSCAFG00020009516) #22 CAVIN3 (ENSCAFG00020009550) #23 ENSCAFG00020009554 SMPD1 (ENSCAFG00020009556) #24 APBB1 (ENSCAFG00020009563) #25 HPX (ENSCAFG00020009575) #26 ENSCAFG00020009593 TRIM3 (ENSCAFG00020009595) #27 ARFIP2 (ENSCAFG00020009602) #28 TIMM10B (ENSCAFG00020009614) #29 DNHD1 (ENSCAFG00020009620) #30 RRP8 (ENSCAFG00020009685) #31 ILK (ENSCAFG00020009689) #32 TAF10 (ENSCAFG00020009695) #33 TPP1 (ENSCAFG00020009702) #34 DCHS1 (ENSCAFG00020009712) #35 Red fox MODERN SPECIES 243 ENSVVUG00000024427 ENSVVUG00000024424 #12 OR56A5 (ENSVVUG00000024421) #12 ENSVVUG00000024418 OR56A1 (ENSVVUG00000024416) ENSVVUG00000024414 #14 ENSVVUG00000024410 #15 ENSVVUG00000024406 #14 ENSVVUG00000024405 #13 ENSVVUG00000024402 #15 OR52B2 (ENSVVUG00000024400) #17 OR52W1 (ENSVVUG00000024398) #18 C11orf42 (ENSVVUG00000024396) #19 FAM160A2 (ENSVVUG00000024385) #20 CNGA4 (ENSVVUG00000024383) #21 CCKBR (ENSVVUG00000024380) #22 CAVIN3 (ENSVVUG00000024379) #23 SMPD1 (ENSVVUG00000024377) #24 APBB1 (ENSVVUG00000024371) #25 ENSVVUG00000024367 HPX (ENSVVUG00000024365) #26 TRIM3 (ENSVVUG00000024360) #27 ARFIP2 (ENSVVUG00000024358) #28 TIMM10B (ENSVVUG00000024356) #29 RRP8 (ENSVVUG00000024346) #31 ILK (ENSVVUG00000024160) #32 TAF10 (ENSVVUG00000024154) #33 DCHS1 (ENSVVUG00000024107) #35 MRPL17 (ENSVVUG00000024084) #36 ENSVVUG00000024082 ENSVVUG00000024079 #37 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000155550.a.a.b ENSGT00940000162834.a #12 ENSGT01090000260056.a.a.a.b ENSGT01090000260056.a.a.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b Ursidae ANCESTRAL SPECIES 42 ENSGT00940000162834.b #12 ENSGT00940000155550.a.a.a.a.a ENSGT00940000155550.b.c ENSGT00940000155550.a.a.a.a.b.a ENSGT00940000155550.a.a.b ENSGT00940000162834.a #12 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b Ursus ANCESTRAL SPECIES 138 ENSGT00940000155550.b.c ENSGT00940000155550.a.a.a.a.b.a ENSGT00940000155550.a.a.b ENSGT00940000162834.a.b #12 ENSGT00940000162834.b #12 ENSGT00940000162834.a.a #12 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b American black bear MODERN SPECIES 1859 OR52B2 (ENSUAMG00000023998) #17 OR52W1 (ENSUAMG00000023999) #18 C11orf42 (ENSUAMG00000024000) #19 FHIP1B (ENSUAMG00000024001) #20 CNGA4 (ENSUAMG00000024010) #21 CCKBR (ENSUAMG00000024011) #22 CAVIN3 (ENSUAMG00000024012) #23 SMPD1 (ENSUAMG00000024013) #24 Polar bear MODERN SPECIES 444 ENSUMAG00000001603 ENSUMAG00000001598 ENSUMAG00000001591 ENSUMAG00000001582 #12 OR56A5 (ENSUMAG00000001561) #12 ENSUMAG00000001549 #13 OR56B4 (ENSUMAG00000001546) #15 ENSUMAG00000001538 #15 ENSUMAG00000001529 #15 OR52B2 (ENSUMAG00000001522) #17 OR52W1 (ENSUMAG00000001520) #18 C11orf42 (ENSUMAG00000001508) #19 FHIP1B (ENSUMAG00000001115) #20 CNGA4 (ENSUMAG00000001067) #21 CCKBR (ENSUMAG00000001035) #22 CAVIN3 (ENSUMAG00000001029) #23 SMPD1 (ENSUMAG00000000864) #24 APBB1 (ENSUMAG00000000852) #25 HPX (ENSUMAG00000000841) #26 TRIM3 (ENSUMAG00000000831) #27 ARFIP2 (ENSUMAG00000000812) #28 TIMM10B (ENSUMAG00000000775) #29 RRP8 (ENSUMAG00000000528) #31 ILK (ENSUMAG00000000525) #32 TPP1 (ENSUMAG00000000517) #34 DCHS1 (ENSUMAG00000000426) #35 MRPL17 (ENSUMAG00000000411) #36 ENSUMAG00000000406 ENSUMAG00000000394 #37 ENSUMAG00000000375 Giant Panda MODERN SPECIES 18 ENSAMEG00000025557 ENSAMEG00000029959 ENSAMEG00000023818 ENSAMEG00000025770 OR56A5 (ENSAMEG00000030779) #12 ENSAMEG00000027783 #15 ENSAMEG00000024668 #13 OR56B4 (ENSAMEG00000026353) #15 ENSAMEG00000028585 #15 ENSAMEG00000030989 #15 OR52B2 (ENSAMEG00000020198) #17 OR52W1 (ENSAMEG00000020197) #18 C11orf42 (ENSAMEG00000016484) #19 FHIP1B (ENSAMEG00000016462) #20 CNGA4 (ENSAMEG00000016441) #21 CCKBR (ENSAMEG00000016432) #22 CAVIN3 (ENSAMEG00000016430) #23 SMPD1 (ENSAMEG00000016422) #24 APBB1 (ENSAMEG00000016393) #25 HPX (ENSAMEG00000016372) #26 TRIM3 (ENSAMEG00000016339) #27 ARFIP2 (ENSAMEG00000016326) #28 TIMM10B (ENSAMEG00000016325) #29 ENSAMEG00000027452 #30 ENSAMEG00000030496 #30 RRP8 (ENSAMEG00000016307) #31 ILK (ENSAMEG00000016283) #32 TAF10 (ENSAMEG00000016278) #33 TPP1 (ENSAMEG00000016259) #34 DCHS1 (ENSAMEG00000016249) #35 MRPL17 (ENSAMEG00000016246) #36 Mustelinae ANCESTRAL SPECIES 78 ENSGT00940000162834.a #12 ENSGT00940000155550.a.a.a.a.a ENSGT00940000155550.b.c ENSGT00940000155550.a.a.b ENSGT00940000162834.b #12 ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 American mink MODERN SPECIES 474 ENSNVIG00000001281 OR56A5 (ENSNVIG00000001289) #12 OR56A4 (ENSNVIG00000001291) OR56A1 (ENSNVIG00000001306) ENSNVIG00000001318 #14 ENSNVIG00000001322 #15 ENSNVIG00000001328 #14 ENSNVIG00000001337 #13 ENSNVIG00000001339 #15 ENSNVIG00000001347 #15 OR52B2 (ENSNVIG00000001355) #17 OR52W1 (ENSNVIG00000001360) #18 C11orf42 (ENSNVIG00000001361) #19 FHIP1B (ENSNVIG00000001374) #20 CNGA4 (ENSNVIG00000001397) #21 ENSNVIG00000001412 #22 ENSNVIG00000001422 CAVIN3 (ENSNVIG00000001431) #23 SMPD1 (ENSNVIG00000001436) #24 APBB1 (ENSNVIG00000001468) #25 HPX (ENSNVIG00000001813) #26 TRIM3 (ENSNVIG00000001844) #27 ARFIP2 (ENSNVIG00000001865) #28 TIMM10B (ENSNVIG00000001911) #29 DNHD1 (ENSNVIG00000001925) #30 RRP8 (ENSNVIG00000002047) #31 ILK (ENSNVIG00000002078) #32 TAF10 (ENSNVIG00000002112) #33 TPP1 (ENSNVIG00000002138) #34 DCHS1 (ENSNVIG00000002240) #35 MRPL17 (ENSNVIG00000002293) #36 Ferret MODERN SPECIES 539 ENSMPUG00000018919 #15 ENSMPUG00000018912 #14 ENSMPUG00000005834 #15 OR52B2 (ENSMPUG00000018906) #17 OR52W1 (ENSMPUG00000018899) #18 C11orf42 (ENSMPUG00000005830) #19 FHIP1B (ENSMPUG00000005820) #20 CNGA4 (ENSMPUG00000005790) #21 CCKBR (ENSMPUG00000005743) #22 CAVIN3 (ENSMPUG00000005738) #23 SMPD1 (ENSMPUG00000005732) #24 APBB1 (ENSMPUG00000005723) #25 HPX (ENSMPUG00000005717) #26 TRIM3 (ENSMPUG00000005622) #27 ARFIP2 (ENSMPUG00000005613) #28 TIMM10B (ENSMPUG00000005598) #29 DNHD1 (ENSMPUG00000005555) #30 RRP8 (ENSMPUG00000005510) #31 ILK (ENSMPUG00000005495) #32 TPP1 (ENSMPUG00000005480) #34 DCHS1 (ENSMPUG00000005461) #35 ENSMPUG00000005449 #36 Eulipotyphla ANCESTRAL SPECIES 1888 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 Hedgehog MODERN SPECIES 14749 ENSEEUG00000012683 #22 CAVIN3 (ENSEEUG00000012703) #23 Common shrew MODERN SPECIES 10330 CCKBR (ENSSARG00000000918) #22 Atlantogenata ANCESTRAL SPECIES 13 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.b ENSGT00940000155550.a.b ENSGT00940000155550.a.a.b ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT00940000162834 #12 ENSGT00940000161235 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.b Afrotheria ANCESTRAL SPECIES 25 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b Afrotheria_a ANCESTRAL SPECIES 24 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.b Elephant MODERN SPECIES 209 ENSLAFG00000009583 ENSLAFG00000006006 #16 OR52B2 (ENSLAFG00000031446) #17 OR52W1 (ENSLAFG00000017724) #18 C11orf42 (ENSLAFG00000006011) #19 FHIP1B (ENSLAFG00000031716) #20 CNGA4 (ENSLAFG00000028939) #21 CCKBR (ENSLAFG00000013975) #22 CAVIN3 (ENSLAFG00000010992) #23 SMPD1 (ENSLAFG00000006393) #24 APBB1 (ENSLAFG00000027099) #25 HPX (ENSLAFG00000013977) #26 TRIM3 (ENSLAFG00000013983) #27 ARFIP2 (ENSLAFG00000015380) #28 TIMM10B (ENSLAFG00000030768) #29 ENSLAFG00000015385 #30 ENSLAFG00000014318 #30 RRP8 (ENSLAFG00000000112) #31 ILK (ENSLAFG00000014337) #32 ENSLAFG00000029330 #33 TPP1 (ENSLAFG00000031815) #34 ENSLAFG00000016034 #35 MRPL17 (ENSLAFG00000004834) #36 Hyrax MODERN SPECIES 8913 CCKBR (ENSPCAG00000004283) #22 Tenrec MODERN SPECIES 16805 CCKBR (ENSETEG00000015017) #22 Xenarthra ANCESTRAL SPECIES 64 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT01090000260024.A.a.a.b.b.b.a.a.b ENSGT01090000259995.a.b #37 Armadillo MODERN SPECIES 2369 ENSDNOG00000019686 OR56A5 (ENSDNOG00000043547) #12 OR56A1 (ENSDNOG00000035832) ENSDNOG00000039541 ENSDNOG00000001876 #14 ENSDNOG00000049144 #15 ENSDNOG00000043751 #15 ENSDNOG00000049345 #15 ENSDNOG00000047797 #15 ENSDNOG00000038363 #15 OR52B2 (ENSDNOG00000049097) #17 OR52W1 (ENSDNOG00000019134) #18 C11orf42 (ENSDNOG00000007031) #19 FHIP1B (ENSDNOG00000007039) #20 CNGA4 (ENSDNOG00000040646) #21 CCKBR (ENSDNOG00000034446) #22 CAVIN3 (ENSDNOG00000038777) #23 SMPD1 (ENSDNOG00000048070) #24 APBB1 (ENSDNOG00000036259) #25 ENSDNOG00000035829 #26 TRIM3 (ENSDNOG00000043326) #27 ARFIP2 (ENSDNOG00000042190) #28 TIMM10B (ENSDNOG00000045957) #29 DNHD1 (ENSDNOG00000038835) #30 RRP8 (ENSDNOG00000000812) #31 ILK (ENSDNOG00000000813) #32 ENSDNOG00000000814 #33 TPP1 (ENSDNOG00000000820) #34 DCHS1 (ENSDNOG00000047878) #35 ENSDNOG00000037357 #37 ENSDNOG00000033243 Marsupialia ANCESTRAL SPECIES 10 ENSGT00940000155550.b.a ENSGT00940000155550.a.c.b ENSGT00940000155550.b.b ENSGT00940000155550.a.c.a ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Opossum MODERN SPECIES 3 NTF4 (ENSMODG00000013772) KCNA7 (ENSMODG00000037394) ENSMODG00000023381 PPFIA3 (ENSMODG00000013817) ENSMODG00000013840 ENSMODG00000013845 ENSMODG00000044736 ENSMODG00000045834 ENSMODG00000037133 ENSMODG00000014103 ENSMODG00000019960 OR52W1 (ENSMODG00000023358) #18 C11orf42 (ENSMODG00000018594) #19 FHIP1B (ENSMODG00000018593) #20 CNGA4 (ENSMODG00000018592) #21 CCKBR (ENSMODG00000049350) #22 CAVIN3 (ENSMODG00000018588) #23 SMPD1 (ENSMODG00000018587) #24 APBB1 (ENSMODG00000018585) #25 HPX (ENSMODG00000018583) #26 TRIM3 (ENSMODG00000018582) #27 ARFIP2 (ENSMODG00000049250) #28 TIMM10B (ENSMODG00000018578) #29 ENSMODG00000018574 #30 ENSMODG00000051595 #31 ILK (ENSMODG00000018570) #32 TAF10 (ENSMODG00000018568) #33 TPP1 (ENSMODG00000018566) #34 DCHS1 (ENSMODG00000018475) #35 MRPL17 (ENSMODG00000018267) #36 ENSMODG00000045816 Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000155550.b.a ENSGT00940000155550.a.c.b ENSGT00940000155550.b.b ENSGT00940000155550.a.c.a ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.b #16 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Diprotodontia ANCESTRAL SPECIES 3 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.a.a.a.a.b ENSGT00940000155550.b.a ENSGT00940000155550.a.c.a ENSGT00940000161235 ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a #14 ENSGT01100000263528.A.a.b #13 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00940000154393.h.b Diprotodontia_a ANCESTRAL SPECIES 4 ENSGT01090000260056.a.a.a.a.b ENSGT01090000260056.a.a.a.a.a.a.a.b ENSGT01090000260056.a.a.a.a.a.a.a.a.b ENSGT00940000155550.b.a ENSGT00940000155550.a.c.a ENSGT00940000163046 ENSGT01090000260013.b.a.a.a.a.lb #14 ENSGT00940000161235 ENSGT01090000260013.b.a.a.a.a.mb #14 ENSGT01100000263522.A.d.a.a #15 ENSGT01090000260043.a.a.a.b.a.b.a #17 ENSGT01100000263528.A.a.a #18 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000182910.a.a.b #23 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000161822 #35 ENSGT00390000010698 #36 ENSGT00960000186612.B.a.b.d.a.b koala MODERN SPECIES 279 ENSPCIG00000008705 ENSPCIG00000008704 ENSPCIG00000035627 ENSPCIG00000037241 ENSPCIG00000035288 OR56A1 (ENSPCIG00000032164) ENSPCIG00000031047 #14 ENSPCIG00000033044 #14 OR56B4 (ENSPCIG00000031077) #15 ENSPCIG00000032030 #17 ENSPCIG00000032790 #17 OR52W1 (ENSPCIG00000010821) #18 C11orf42 (ENSPCIG00000010818) #19 FHIP1B (ENSPCIG00000010816) #20 CNGA4 (ENSPCIG00000010814) #21 CCKBR (ENSPCIG00000010813) #22 CAVIN3 (ENSPCIG00000010812) #23 SMPD1 (ENSPCIG00000022940) #24 APBB1 (ENSPCIG00000022934) #25 HPX (ENSPCIG00000022928) #26 TRIM3 (ENSPCIG00000010809) #27 ARFIP2 (ENSPCIG00000010805) #28 TIMM10B (ENSPCIG00000010803) #29 ENSPCIG00000010799 #30 ENSPCIG00000037345 #31 ILK (ENSPCIG00000026497) #32 TAF10 (ENSPCIG00000026496) #33 TPP1 (ENSPCIG00000026275) #34 DCHS1 (ENSPCIG00000026260) #35 MRPL17 (ENSPCIG00000010796) #36 ENSPCIG00000037315 Common wonbat MODERN SPECIES 1014 OR52W1 (ENSVURG00010005063) #18 C11orf42 (ENSVURG00010005052) #19 FHIP1B (ENSVURG00010005030) #20 CNGA4 (ENSVURG00010005012) #21 CCKBR (ENSVURG00010004966) #22 CAVIN3 (ENSVURG00010004961) #23 SMPD1 (ENSVURG00010004955) #24 APBB1 (ENSVURG00010004933) #25 HPX (ENSVURG00010004915) #26 TRIM3 (ENSVURG00010004890) #27 ARFIP2 (ENSVURG00010004862) #28 TIMM10B (ENSVURG00010004849) #29 ENSVURG00010004771 #30 ENSVURG00010004751 #31 ENSVURG00010004747 ILK (ENSVURG00010004730) #32 ENSVURG00010004708 #33 TPP1 (ENSVURG00010004695) #34 DCHS1 (ENSVURG00010004668) #35 ENSVURG00010004649 #36 Wallaby MODERN SPECIES 7954 ENSMEUG00000006069 #21 CCKBR (ENSMEUG00000006084) #22 CAVIN3 (ENSMEUG00000006093) #23 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000031668 ENSSHAG00000024505 ENSSHAG00000031100 ENSSHAG00000031321 ENSSHAG00000021634 ENSSHAG00000021569 ENSSHAG00000023753 ##7 ENSSHAG00000030247 ##7 OR56B4 (ENSSHAG00000002946) #15 ENSSHAG00000000498 #16 OR52B2 (ENSSHAG00000001566) #17 OR52W1 (ENSSHAG00000022889) #18 C11orf42 (ENSSHAG00000002302) #19 FHIP1B (ENSSHAG00000002297) #20 CNGA4 (ENSSHAG00000003210) #21 CCKBR (ENSSHAG00000024082) #22 APBB1 (ENSSHAG00000006156) #25 CAVIN3 (ENSSHAG00000004717) #23 SMPD1 (ENSSHAG00000006065) #24 HPX (ENSSHAG00000006895) #26 TRIM3 (ENSSHAG00000007461) #27 ARFIP2 (ENSSHAG00000026897) #28 TIMM10B (ENSSHAG00000025286) #29 ENSSHAG00000008256 #30 RRP8 (ENSSHAG00000009273) #31 ILK (ENSSHAG00000009423) #32 TPP1 (ENSSHAG00000009541) #34 DCHS1 (ENSSHAG00000009598) #35 ENSSHAG00000024336 #36 ENSSHAG00000029817 ENSSHAG00000023923 Platypus MODERN SPECIES 11 ENSOANG00000039554 #7 ENSOANG00000044603 #7 ENSOANG00000037442 #7 ENSOANG00000049927 ##7 ENSOANG00000021550 ##8 ENSOANG00000038500 ##8 ENSOANG00000042271 ##8 ENSOANG00000010522 ENSOANG00000037747 OR56A3 (ENSOANG00000040059) ENSOANG00000046652 ENSOANG00000047830 #14 ENSOANG00000047353 ENSOANG00000047857 #19 CNGA4 (ENSOANG00000011914) #21 ENSOANG00000051173 #22 CAVIN3 (ENSOANG00000043123) #23 SMPD1 (ENSOANG00000004577) #24 APBB1 (ENSOANG00000040211) #25 HPX (ENSOANG00000013529) #26 TRIM3 (ENSOANG00000001409) #27 ARFIP2 (ENSOANG00000038976) #28 ENSOANG00000015283 #29 ENSOANG00000049009 #30 ENSOANG00000036043 RRP8 (ENSOANG00000044206) #31 ILK (ENSOANG00000038952) #32 TAF10 (ENSOANG00000037636) #33 TPP1 (ENSOANG00000040337) #34 DCHS1 (ENSOANG00000041834) #35 MRPL17 (ENSOANG00000043700) #36 Sauria ANCESTRAL SPECIES 44 ENSGT00950000183078.b.a.a ENSGT00390000013075.a ENSGT00940000169757 ENSGT00940000160721 ENSGT00550000074799 ENSGT01060000250461 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.a ##14 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Lepidosauria ANCESTRAL SPECIES 57 ENSGT01100000263528.A.b.b ##8 ENSGT01100000263528.A.b.a ##8 ENSGT01100000263522.A.c.b.c.a ##7 ENSGT01100000263490.D.a.a ENSGT01090000259999.F ENSGT01090000260043.a.a.a.a ##16 ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000156437.j.b.a ENSGT00940000162603 ENSGT00390000010849 ENSGT00940000157809 ENSGT00960000189084 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Episquamata ANCESTRAL SPECIES 2 ENSGT00910000144246 ENSGT01100000263522.B.d ##7 ENSGT00390000002732.n ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000156437.j.b.a.b ENSGT00940000162603 ENSGT00940000156437.j.b.a.a ENSGT00940000156437.j.a ENSGT00390000010849 ENSGT00940000157809.d ENSGT00960000189084 ENSGT00940000157809.c ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00940000155128.a.a.b ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Laterata ANCESTRAL SPECIES 63 ENSGT00940000157809.c.b ENSGT00960000189084 ENSGT00940000157809.c.a ENSGT00940000156437.j.a ENSGT00940000156437.j.b.a.a ENSGT00940000162603 ENSGT00940000156437.j.b.a.b ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00980000198666 ENSGT00940000155116.a ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00940000155128.a.a.b ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Common wall lizard MODERN SPECIES 12 ENSPMRG00000006171 #20 ENSPMRG00000006153 CNGA4 (ENSPMRG00000002534) #21 ENSPMRG00000002526 ENSPMRG00000002522 ENSPMRG00000002520 ENSPMRG00000002519 ENSPMRG00000002512 ENSPMRG00000002509 ENSPMRG00000002499 ENSPMRG00000002492 ENSPMRG00000002485 ENSPMRG00000002478 ENSPMRG00000002477 ENSPMRG00000002475 CCKBR (ENSPMRG00000002458) #22 SMPD1 (ENSPMRG00000002450) #24 APBB1 (ENSPMRG00000002441) #25 ENSPMRG00000002435 HPX (ENSPMRG00000002423) #26 TRIM3 (ENSPMRG00000002411) #27 ENSPMRG00000002399 ARFIP2 (ENSPMRG00000002359) #28 TIMM10B (ENSPMRG00000002335) #29 ENSPMRG00000002324 ENSPMRG00000002320 ENSPMRG00000002315 ENSPMRG00000002295 ILK (ENSPMRG00000002281) #32 TAF10 (ENSPMRG00000002278) #33 TPP1 (ENSPMRG00000002273) #34 Argentine black and white tegu MODERN SPECIES 159 ENSSMRG00000002970 ENSSMRG00000002981 C11orf42 (ENSSMRG00000002986) #19 FHIP1B (ENSSMRG00000002989) #20 CNGA4 (ENSSMRG00000002995) #21 CCKBR (ENSSMRG00000003013) #22 SMPD1 (ENSSMRG00000003019) #24 APBB1 (ENSSMRG00000003032) #25 HPX (ENSSMRG00000003036) #26 TRIM3 (ENSSMRG00000003050) #27 ARFIP2 (ENSSMRG00000003066) #28 ENSSMRG00000003083 #29 ENSSMRG00000003086 #30 ENSSMRG00000003089 ENSSMRG00000003099 ENSSMRG00000003103 ENSSMRG00000003104 #31 ENSSMRG00000003107 #31 ILK (ENSSMRG00000003110) #32 TAF10 (ENSSMRG00000003111) #33 TPP1 (ENSSMRG00000003113) #34 Toxicofera ANCESTRAL SPECIES 39 ENSGT00940000165269 ENSGT00910000144246 ENSGT01100000263522.B.c ##7 ENSGT00390000002732.n ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000156437.j.b.a.b ENSGT00940000156437.j.a ENSGT00940000157809.c ENSGT00390000010849 ENSGT00940000157809.d ENSGT00960000189084 ENSGT00940000155116.a.t ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00940000155128.a.a.b ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b Elapidae ANCESTRAL SPECIES 37 ENSGT01100000263490.D.a.a ENSGT00390000002732.n ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000156437.j.b.a.b ENSGT00940000156437.j.b.a.a ENSGT00940000156437.j.a ENSGT00940000157809.c ENSGT00390000010849 ENSGT00940000157809.d ENSGT00960000189084.f ENSGT01090000259999.C.k.a ENSGT00940000155116.a.t ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00940000155128.a.a.b ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Elapidae_a ANCESTRAL SPECIES 87 ENSGT01100000263490.D.a.a ENSGT00390000002732.n ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000156437.j.b.a.b ENSGT00940000156437.j.b.a.a ENSGT00940000156437.j.a ENSGT00940000157809.c ENSGT00390000010849 ENSGT00940000157809.d ENSGT01090000260056 ENSGT00940000155717.d ENSGT00940000155116.a.t ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00940000155128.a.a.b ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Acanthophiinae ANCESTRAL SPECIES 83 ENSGT01100000263522.A.c.b.d ##7 ENSGT00390000002732.n ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000156437.j.b.a.b ENSGT00940000156437.j.a ENSGT00390000010849 ENSGT00940000157809.c ENSGT00960000189084.e ENSGT00940000157809.d ENSGT01090000260056 ENSGT00940000155717.d ENSGT00940000155116.a.t ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00940000155128.a.a.b ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Mainland tiger snake MODERN SPECIES 414 ENSNSUG00000007151 ENSNSUG00000007152 ENSNSUG00000007153 C11orf42 (ENSNSUG00000007154) #19 FHIP1B (ENSNSUG00000007156) #20 CNGA4 (ENSNSUG00000007157) #21 CCKBR (ENSNSUG00000007158) #22 SMPD1 (ENSNSUG00000007162) #24 APBB1 (ENSNSUG00000007165) #25 HPX (ENSNSUG00000007172) #26 TRIM3 (ENSNSUG00000007175) #27 ENSNSUG00000007178 ARFIP2 (ENSNSUG00000007183) #28 TIMM10B (ENSNSUG00000007185) #29 ENSNSUG00000007190 #30 ENSNSUG00000007194 RRP8 (ENSNSUG00000007245) #31 ILK (ENSNSUG00000007246) #32 TAF10 (ENSNSUG00000007247) #33 TPP1 (ENSNSUG00000007248) #34 ENSNSUG00000007251 LCMT2 (ENSNSUG00000007259) Eastern brown snake MODERN SPECIES 176 RRM1 (ENSPTXG00000011494) ENSPTXG00000011500 ##7 ENSPTXG00000011504 ENSPTXG00000011507 ##14 RPS11 (ENSPTXG00000011510) ENSPTXG00000011515 ##16 ENSPTXG00000011517 ENSPTXG00000011520 ENSPTXG00000011536 ENSPTXG00000011537 ENSPTXG00000011538 ENSPTXG00000011539 ENSPTXG00000011541 CDCA8 (ENSPTXG00000011543) ENSPTXG00000011545 CCKBR (ENSPTXG00000011564) #22 ENSPTXG00000011566 CNGA4 (ENSPTXG00000011567) #21 ENSPTXG00000011568 #24 ENSPTXG00000011569 ENSPTXG00000011570 #26 ENSPTXG00000011571 #26 TRIM3 (ENSPTXG00000011572) #27 ARFIP2 (ENSPTXG00000011573) #28 ENSPTXG00000011575 #29 ENSPTXG00000011576 #30 ENSPTXG00000011577 RRP8 (ENSPTXG00000011578) #31 ILK (ENSPTXG00000011580) #32 TPP1 (ENSPTXG00000011581) #34 ENSPTXG00000011582 Blue-lipped sea krait MODERN SPECIES 5317 CCKBR (ENSLLTG00000007829) #22 Indian cobra MODERN SPECIES 4 ENSNNAG00000013957 ENSNNAG00000013971 ENSNNAG00000013986 ENSNNAG00000014055 ENSNNAG00000014079 ENSNNAG00000014089 ##14 ENSNNAG00000014097 ##14 ENSNNAG00000014126 ENSNNAG00000014175 ENSNNAG00000014189 ENSNNAG00000014200 ENSNNAG00000014218 C11orf42 (ENSNNAG00000014237) #19 ENSNNAG00000014284 #20 CNGA4 (ENSNNAG00000014292) #21 CCKBR (ENSNNAG00000014310) #22 SMPD1 (ENSNNAG00000007593) #24 ENSNNAG00000007625 #25 ENSNNAG00000007643 #25 HPX (ENSNNAG00000007683) #26 TRIM3 (ENSNNAG00000007745) #27 ARFIP2 (ENSNNAG00000007774) #28 TIMM10B (ENSNNAG00000007814) #29 ENSNNAG00000007844 RRP8 (ENSNNAG00000007872) #31 ILK (ENSNNAG00000007912) #32 TAF10 (ENSNNAG00000007958) #33 TPP1 (ENSNNAG00000007995) #34 ENSNNAG00000008113 LCMT2 (ENSNNAG00000008289) PGM2L1 (ENSNNAG00000008416) Lizard DUPLICATION Lizard MODERN SPECIES 465 ENSACAG00000041306 #22 Lizard MODERN SPECIES 458 ENSACAG00000025606 #22 Archelosauria ANCESTRAL SPECIES ENSGT00940000169757 ENSGT01060000248588.b ENSGT00940000160721 ENSGT00550000074799 ENSGT01060000250461 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.a ##14 ENSGT00940000155116.a ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT01000000216338 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Archosauria ANCESTRAL SPECIES 2 ENSGT00390000004140.b ENSGT00390000013075.a ENSGT00940000160721 ENSGT00550000074799 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.b.b ##14 ENSGT01100000263528.A.b.b ##8 ENSGT01100000263522.A.c.b.c.a ##7 ENSGT00940000155116.a ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Aves ANCESTRAL SPECIES 60 ENSGT00960000189084 ENSGT00940000157809.f ENSGT00390000010849.b ENSGT00940000157809.e.a ENSGT00390000010849.a ENSGT00940000157809.e.b ENSGT00940000155116.a ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT01040000244793 ENSGT00940000163671.b ENSGT00940000162599 Neognathae ANCESTRAL SPECIES 1 ENSGT01090000260013.b.b ##14 ENSGT01100000263528.A.b.b ##8 ENSGT01100000263528.A.b.a ##8 ENSGT01100000263490.C.a ENSGT01100000263490.D.a.a ENSGT01090000259999.F ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT00940000156437.j.a.a ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00940000155116.a ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Galloanserae ANCESTRAL SPECIES 1 ENSGT00550000074799 ENSGT00510000047299 ENSGT00940000155158 ENSGT00390000000214.a.a ENSGT00940000165269 ENSGT00910000144246 ENSGT01090000260013.b.b ##14 ENSGT01090000260013.b.a.a.a.b ##14 ENSGT01100000263490.A.a.a.a ENSGT01090000260043.a.a.a.b.b.a.a.a ##16 ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT00390000002732.n ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Phasianidae ANCESTRAL SPECIES ENSGT01090000260013.b.a.a.a.b ##14 ENSGT00960000189084.h ENSGT00940000157809.e.b ENSGT00390000010849.b ENSGT00940000157809.e.a.a.b ENSGT00390000010849.a.e.b ENSGT01090000260043.a.a.a.b.b.a.a.a ##16 ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT00940000156437.j.a.a ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Phasianidae_b ANCESTRAL SPECIES 45 ENSGT01100000263554.A.a ENSGT00390000010849.a.e.b ENSGT00390000010849.b ENSGT00940000157809.e.a.a.b ENSGT01090000260043.a.a.a.b.b.a.a.a ##16 ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT00940000156437.j.a.a ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Turkey MODERN SPECIES ENSMGAG00000017212 OR51E2 (ENSMGAG00000010773) ENSMGAG00000016220 ENSMGAG00000014964 ENSMGAG00000021241 ENSMGAG00000014945 ENSMGAG00000014944 ENSMGAG00000014946 ENSMGAG00000019891 ##16 ENSMGAG00000015285 ENSMGAG00000015283 ##16 ENSMGAG00000021488 ENSMGAG00000015319 ##16 ENSMGAG00000009652 CNGA4 (ENSMGAG00000019671) #21 CCKBR (ENSMGAG00000007144) #22 ARFIP2 (ENSMGAG00000015281) #28 ENSMGAG00000015279 ENSMGAG00000015217 ENSMGAG00000017364 ENSMGAG00000015216 ENSMGAG00000015218 ENSMGAG00000015220 ENSMGAG00000020786 ENSMGAG00000015221 ENSMGAG00000015222 ENSMGAG00000015223 ENSMGAG00000016476 ENSMGAG00000018715 ENSMGAG00000015226 ENSMGAG00000021781 Chicken MODERN SPECIES OR52R1 (ENSGALG00010003544) ##14 OR51M1 (ENSGALG00010003349) HBBA (ENSGALG00010003868) ENSGALG00010003371 ENSGALG00010003379 HBE1 (ENSGALG00010003363) ENSGALG00010003389 FOLR1 (ENSGALG00010003415) ENSGALG00010003450 OR52B2L (ENSGALG00010003487) ##16 ENSGALG00010003494 ENSGALG00010003499 ##16 RPS11 (ENSGALG00010001654) FHIP1B (ENSGALG00010001551) #20 CNGA4 (ENSGALG00010001553) #21 CCKBR (ENSGALG00010001558) #22 SMPD1 (ENSGALG00010001570) #24 APBB1 (ENSGALG00010001605) #25 HPX (ENSGALG00010001612) #26 TRIM3 (ENSGALG00010001617) #27 ARFIP2 (ENSGALG00010001627) #28 TIMM10B (ENSGALG00010001635) #29 ENSGALG00010001674 ILK (ENSGALG00010001689) #32 TAF10 (ENSGALG00010001697) #33 TPP1 (ENSGALG00010003814) #34 ENSGALG00010001704 LCMT2 (ENSGALG00010001710) ENSGALG00010001715 Japanese quail MODERN SPECIES ENSCJPG00005005657 ##14 ENSCJPG00005005655 ##14 ENSCJPG00005005654 ##8 ENSCJPG00005005652 ENSCJPG00005005650 ENSCJPG00005005649 ENSCJPG00005005510 ENSCJPG00005005507 ENSCJPG00005005504 ENSCJPG00005005502 ##16 ENSCJPG00005005500 ENSCJPG00005005498 ##16 RPS11 (ENSCJPG00005005488) FHIP1B (ENSCJPG00005005483) #20 CNGA4 (ENSCJPG00005005481) #21 CCKBR (ENSCJPG00005005479) #22 SMPD1 (ENSCJPG00005005471) #24 APBB1 (ENSCJPG00005005399) #25 HPX (ENSCJPG00005005397) #26 ARFIP2 (ENSCJPG00005005388) #28 TIMM10B (ENSCJPG00005005386) #29 ENSCJPG00005005381 RRP8 (ENSCJPG00005005367) #31 ILK (ENSCJPG00005005363) #32 TPP1 (ENSCJPG00005005361) #34 ENSCJPG00005005359 LCMT2 (ENSCJPG00005005357) ENSCJPG00005005355 ENSCJPG00005005353 LRRC51 (ENSCJPG00005005345) NUMA1 (ENSCJPG00005005322) Anatidae ANCESTRAL SPECIES 56 ENSGT01090000259999.F ENSGT01100000263490.D.a.a ENSGT01090000260013.b.a.a.a.b ##14 ENSGT00940000157809.e.b ENSGT00960000189084.g ENSGT00940000157809.f.a ENSGT00390000010849.b ENSGT00940000157809.e.a.a.a ENSGT01100000263490.A.a.a.a ENSGT01090000260043.a.a.a.b.b.a.a.a ##16 ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT00940000155116.a ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b.f ENSGT00940000162599 Pink-footed goose MODERN SPECIES 278 ENSABRG00000012322 ENSABRG00000012324 ENSABRG00000012330 ENSABRG00000012338 ENSABRG00000012341 ENSABRG00000012346 ENSABRG00000012354 ##16 ENSABRG00000012390 ENSABRG00000012400 ##16 ENSABRG00000012407 ##16 ENSABRG00000012410 ##16 RPS11 (ENSABRG00000000727) ENSABRG00000000791 FHIP1B (ENSABRG00000000820) #20 CNGA4 (ENSABRG00000000926) #21 CCKBR (ENSABRG00000000945) #22 APBB1 (ENSABRG00000001000) #25 HPX (ENSABRG00000001101) #26 TRIM3 (ENSABRG00000001142) #27 ARFIP2 (ENSABRG00000001173) #28 TIMM10B (ENSABRG00000001192) #29 ENSABRG00000001223 ILK (ENSABRG00000001278) #32 TAF10 (ENSABRG00000001328) #33 TPP1 (ENSABRG00000001354) #34 ENSABRG00000001391 LCMT2 (ENSABRG00000001414) ENSABRG00000001440 Duck MODERN SPECIES ENSAPLG00000000832 OR51E2 (ENSAPLG00000000823) OR52R1 (ENSAPLG00000000781) ##14 ENSAPLG00000022038 ENSAPLG00000022404 ENSAPLG00000023947 ENSAPLG00000001553 ENSAPLG00000002208 ##16 ENSAPLG00000003503 ENSAPLG00000015040 ENSAPLG00000011624 RPS11 (ENSAPLG00000010997) ENSAPLG00000023002 FHIP1B (ENSAPLG00000006910) #20 SMPD1 (ENSAPLG00000030260) #24 CCKBR (ENSAPLG00000006606) #22 APBB1 (ENSAPLG00000021238) #25 HPX (ENSAPLG00000028385) #26 TIMM10B (ENSAPLG00000025254) #29 ENSAPLG00000009463 ENSAPLG00000020105 ENSAPLG00000024979 ENSAPLG00000029753 ENSAPLG00000029556 ENSAPLG00000024523 ENSAPLG00000010069 Neognathae_b ANCESTRAL SPECIES 38 ENSGT00390000013075.a ENSGT00390000004140.b ENSGT00950000183078.b.a.a ENSGT00390000016789 ENSGT00940000161220 ENSGT00390000000938 ENSGT00950000183144.A.d ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT00940000156437.j.a.a ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Neognathae_c ANCESTRAL SPECIES 11 ENSGT01100000263490.D.a.a ENSGT00960000189084.j ENSGT00940000157809.f.b.a.b ENSGT00940000157809.f.b.a.a ENSGT00960000189084.i ENSGT00940000157809.f.a ENSGT00390000010849.b.b ENSGT00950000183144.A.c ENSGT01100000263554.A.b ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT00940000156437.j.a.a ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00390000009178 #26 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Golden eagle MODERN SPECIES 10 ENSACCG00020010520 ENSACCG00020010578 ENSACCG00020010594 ENSACCG00020010609 ENSACCG00020010616 ENSACCG00020010627 ENSACCG00020010635 ENSACCG00020010643 OR51Q1 (ENSACCG00020010649) ENSACCG00020010657 ##16 ENSACCG00020010662 ENSACCG00020010672 ##16 RPS11 (ENSACCG00020010680) FHIP1B (ENSACCG00020010699) #20 CNGA4 (ENSACCG00020010709) #21 CCKBR (ENSACCG00020010725) #22 SMPD1 (ENSACCG00020010734) #24 APBB1 (ENSACCG00020010749) #25 HPX (ENSACCG00020010777) #26 TRIM3 (ENSACCG00020010804) #27 ARFIP2 (ENSACCG00020010820) #28 ENSACCG00020010833 #29 ENSACCG00020010860 ILK (ENSACCG00020010887) #32 TAF10 (ENSACCG00020010904) #33 TPP1 (ENSACCG00020010919) #34 ENSACCG00020010926 ENSACCG00020010940 LCMT2 (ENSACCG00020010957) Passeriformes ANCESTRAL SPECIES 1 ENSGT00390000016499 ENSGT00960000189458 ENSGT00390000013075.a ENSGT00390000004140.b ENSGT00950000183078.b.a.a ENSGT00390000016789 ENSGT00940000161220 ENSGT00390000000938 ENSGT00950000183144.A.d ENSGT00950000183144.A.c ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00390000002732.n ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Great tit MODERN SPECIES ENSPMJG00000000891 NUP98 (ENSPMJG00000000924) ENSPMJG00000005448 ENSPMJG00000005449 ENSPMJG00000005450 ENSPMJG00000005451 ENSPMJG00000005452 ENSPMJG00000005478 ENSPMJG00000005479 ENSPMJG00000005480 ENSPMJG00000005482 ##16 ENSPMJG00000005486 ##16 RPS11 (ENSPMJG00000005488) FHIP1B (ENSPMJG00000005493) #20 CNGA4 (ENSPMJG00000005623) #21 CCKBR (ENSPMJG00000005649) #22 SMPD1 (ENSPMJG00000005650) #24 APBB1 (ENSPMJG00000005651) #25 TRIM3 (ENSPMJG00000005653) #27 ARFIP2 (ENSPMJG00000005656) #28 ENSPMJG00000005658 #29 ENSPMJG00000005659 ENSPMJG00000005669 ENSPMJG00000005672 #31 ENSPMJG00000005677 #31 ILK (ENSPMJG00000005678) #32 TAF10 (ENSPMJG00000005681) #33 TPP1 (ENSPMJG00000005682) #34 ENSPMJG00000005689 LCMT2 (ENSPMJG00000005703) LRP6 (ENSPMJG00000005745) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000158231 ENSGT00510000049322 ENSGT00940000161651 ENSGT00910000144246 ENSGT00390000000214.a.a ENSGT00940000155158 ENSGT00510000047299 ENSGT00550000074799.b ENSGT00550000074799.a ENSGT00940000160721 ENSGT00950000183144.A.c ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Flycatcher MODERN SPECIES IFNAR1 (ENSFALG00000011897) ENSFALG00000028738 RRM1 (ENSFALG00000010231) STIM1 (ENSFALG00000010216) ENSFALG00000010208 ENSFALG00000010169 ENSFALG00000023801 ENSFALG00000010152 ENSFALG00000010148 ENSFALG00000024788 ENSFALG00000028820 ENSFALG00000024983 ENSFALG00000026135 ENSFALG00000008071 ENSFALG00000008084 ##16 CCKBR (ENSFALG00000008124) #22 ENSFALG00000028863 ##16 ENSFALG00000026748 #20 ENSFALG00000022940 #25 ENSFALG00000028757 ENSFALG00000027466 TRIM3 (ENSFALG00000008157) #27 ARFIP2 (ENSFALG00000008168) #28 ENSFALG00000028777 #29 ENSFALG00000026258 ENSFALG00000008171 TAF10 (ENSFALG00000027096) #33 ILK (ENSFALG00000008183) #32 ENSFALG00000028061 ENSFALG00000008231 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00510000049322 ENSGT00940000161651 ENSGT00910000144246 ENSGT00390000000214.a.a ENSGT00940000155158 ENSGT00510000047299 ENSGT00550000074799.b ENSGT00550000074799.a ENSGT00940000160721 ENSGT00950000183144.A.c ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000164975 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Passeroidea ANCESTRAL SPECIES 10 ENSGT00940000155158 ENSGT00510000047299 ENSGT00550000074799.b ENSGT00550000074799.a ENSGT00940000160721 ENSGT01090000259999.F ENSGT01100000263490.D.a.a ENSGT00940000157809.e.a.b ENSGT00390000010849.b.a.a ENSGT00950000183144.A.c ENSGT01090000260043.a.a.a.b.b.a.b ##16 ENSGT01090000260043.a.a.a.b.b.b ##16 ENSGT00940000164975 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT00940000158173 #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b ENSGT00940000162599 Zebra finch DUPLICATION Zebra finch MODERN SPECIES ENSTGUG00000020222 ENSTGUG00000020485 ENSTGUG00000026720 ENSTGUG00000027415 ENSTGUG00000023257 ENSTGUG00000023804 ENSTGUG00000028762 ##16 ENSTGUG00000024431 ##16 RPS11 (ENSTGUG00000000582) ENSTGUG00000000588 #20 CNGA4 (ENSTGUG00000022508) #21 ENSTGUG00000025680 #22 ENSTGUG00000022950 ##16 ENSTGUG00000029169 ##16 ENSTGUG00000028748 #20 ENSTGUG00000028105 #22 SMPD1 (ENSTGUG00000021401) #24 ENSTGUG00000020302 #25 TRIM3 (ENSTGUG00000000602) #27 ARFIP2 (ENSTGUG00000014784) #28 ENSTGUG00000025726 #29 ENSTGUG00000016384 RRP8 (ENSTGUG00000000591) #31 ILK (ENSTGUG00000000595) #32 TAF10 (ENSTGUG00000026223) #33 TPP1 (ENSTGUG00000000610) #34 ENSTGUG00000000619 LCMT2 (ENSTGUG00000000626) Zebra finch MODERN SPECIES CHRNA10 (ENSTGUG00000023632) ENSTGUG00000000569 OR51E2 (ENSTGUG00000027638) ENSTGUG00000027908 ENSTGUG00000020222 ENSTGUG00000020485 ENSTGUG00000026720 ENSTGUG00000027415 ENSTGUG00000023257 ENSTGUG00000023804 ENSTGUG00000028762 ##16 ENSTGUG00000024431 ##16 RPS11 (ENSTGUG00000000582) ENSTGUG00000000588 #20 CNGA4 (ENSTGUG00000022508) #21 ENSTGUG00000025680 #22 ENSTGUG00000022950 ##16 ENSTGUG00000029169 ##16 ENSTGUG00000028748 #20 ENSTGUG00000028105 #22 SMPD1 (ENSTGUG00000021401) #24 ENSTGUG00000020302 #25 TRIM3 (ENSTGUG00000000602) #27 ARFIP2 (ENSTGUG00000014784) #28 ENSTGUG00000025726 #29 ENSTGUG00000016384 RRP8 (ENSTGUG00000000591) #31 ILK (ENSTGUG00000000595) #32 TAF10 (ENSTGUG00000026223) #33 TPP1 (ENSTGUG00000000610) #34 ENSTGUG00000000619 Cryptodira ANCESTRAL SPECIES 116 ENSGT00940000155116.a ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT01030000237177 Testudinoidea ANCESTRAL SPECIES 91 ENSGT00940000155116.a ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00950000183182.b #24 ENSGT00390000000002.a.b #25 ENSGT01030000237177 Testudinidae ANCESTRAL SPECIES 95 ENSGT00390000016268 #19 ENSGT00950000182936.a.a.a #20 ENSGT00940000159415 #21 ENSGT01100000263563.c.a #22 ENSGT00940000158173.c #27 ENSGT00950000183040.A.a #28 ENSGT00450000040326 #29 ENSGT00940000155523 #30 ENSGT01000000216338 ENSGT00390000006189 #31 ENSGT00940000155956 #32 ENSGT00390000009368 #33 ENSGT00390000008684 #34 ENSGT00940000163671.b.i ENSGT00940000163671.b.j ENSGT00940000162599 ENSGT00390000018035 Goode s thornscrub tortoise MODERN SPECIES 161 ENSGEVG00005017777 ##14 ENSGEVG00005017759 ##14 ENSGEVG00005017742 ##14 ENSGEVG00005017720 ##14 ENSGEVG00005017704 ##14 FHIP1B (ENSGEVG00005017683) #20 CNGA4 (ENSGEVG00005017563) #21 CCKBR (ENSGEVG00005017513) #22 TRIM3 (ENSGEVG00005017455) #27 ENSGEVG00005017421 ARFIP2 (ENSGEVG00005017366) #28 TIMM10B (ENSGEVG00005017338) #29 ENSGEVG00005017172 #30 ENSGEVG00005017127 ENSGEVG00005017100 ENSGEVG00005017072 RRP8 (ENSGEVG00005017042) #31 ILK (ENSGEVG00005016988) #32 TAF10 (ENSGEVG00005016922) #33 TPP1 (ENSGEVG00005016894) #34 ENSGEVG00005016692 LCMT2 (ENSGEVG00005016633) ENSGEVG00005016613 Abingdon island giant tortoise MODERN SPECIES 1247 CCKBR (ENSCABG00000000723) #22 Emydidae ANCESTRAL SPECIES ENSGT01100000263563.c.a #22 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 997 ENSTMTG00000008965 #22 Three-toed box turtle MODERN SPECIES 579 ENSTMTG00000011956 #22 painted turtle MODERN SPECIES 2271 CCKBR (ENSCPBG00000017262) #22 Anura ANCESTRAL SPECIES ENSGT01100000263563.c.a #22 Leishan spiny toad MODERN SPECIES 485 CCKBR (ENSLLEG00000010989) #22 Frog MODERN SPECIES 2 art5 (ENSXETG00000010526) ENSXETG00000041420 XB5918646 [provisional] (ENSXETG00000048232) ENSXETG00000045100 ENSXETG00000048682 art1 (ENSXETG00000000009) ENSXETG00000018102 ENSXETG00000043246 znf37a (ENSXETG00000000007) ENSXETG00000018683 alox12b (ENSXETG00000043131) ENSXETG00000049260 alox15b (ENSXETG00000000004) ENSXETG00000038245 ENSXETG00000034691 cckbr (ENSXETG00000048557) #22 ENSXETG00000042563 ENSXETG00000046871 ENSXETG00000025307 ENSXETG00000043693 #7 smpd1 (ENSXETG00000048357) #24 ENSXETG00000048713 ENSXETG00000047476 #25 ENSXETG00000045947 #25 ENSXETG00000045542 vps16 (ENSXETG00000027061) hpx (ENSXETG00000004700) #26 ENSXETG00000045447 dchs1 (ENSXETG00000004692) trim3 (ENSXETG00000004691) #27 ENSXETG00000041701