Sarcopterygii	ANCESTRAL SPECIES	2	ENSGT00940000155719.b	ENSGT00940000155116.b	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00990000210463	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000157168	ENSGT00940000170545
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00990000210463	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168
Amniota	ANCESTRAL SPECIES	2	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168	ENSGT01000000219065
Mammalia	ANCESTRAL SPECIES	1	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168	ENSGT01000000219065
Theria	ANCESTRAL SPECIES	6	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168	ENSGT01000000219065
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Glires	ANCESTRAL SPECIES	8	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Myomorpha	ANCESTRAL SPECIES	42	ENSGT00960000190929	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00730000111564	ENSGT00940000158189	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Muroidea	ANCESTRAL SPECIES	74	ENSGT00960000190929	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00730000111564	ENSGT00940000158189	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00960000190929	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198	ENSGT00390000018245.d	ENSGT00940000153094.m.b	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198	ENSGT00390000018245.d	ENSGT00940000153094.m.b.a.a.a	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198	ENSGT00390000018245.d	ENSGT00940000153094.m.b.a.a.a	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	19	Agtr1b (ENSPEMG00000026806) #7	Cpb1 (ENSPEMG00000015871) #8	Cpa3 (ENSPEMG00000000978) #9	Gyg (ENSPEMG00000016029) #10	Hltf (ENSPEMG00000016172) #11	Hps3 (ENSPEMG00000006862) #12	Cp (ENSPEMG00000013146) #13	ENSPEMG00000026230 #14	ENSPEMG00000025409 #15	ENSPEMG00000013052 #16	ENSPEMG00000008579 #17	ENSPEMG00000025311 #18	Anxa5 (ENSPEMG00000015439) #19	ENSPEMG00000026454 #20	ENSPEMG00000001402 #21	Qrfpr (ENSPEMG00000000133) #22	Zfp267 (ENSPEMG00000028230) #23	Acad9 (ENSPEMG00000010549) #24	ENSPEMG00000011597 #25	Mccc1 (ENSPEMG00000014164) #26	ENSPEMG00000018868 #27	Atp11b (ENSPEMG00000001656) #28	ENSPEMG00000024881 #29	Sox2 (ENSPEMG00000013974) #30	ENSPEMG00000026113 #31	ENSPEMG00000006887 #32	Fxr1 (ENSPEMG00000012962) #33	Ccdc39 (ENSPEMG00000017829) #34	Ttc14 (ENSPEMG00000013671) #35	Pex5l (ENSPEMG00000006300) #36	Usp13 (ENSPEMG00000001021) #37
Northern American deer mouse	MODERN SPECIES	16	ENSPEMG00000028242	ENSPEMG00000029449	ENSPEMG00000030176	ENSPEMG00000027629	ENSPEMG00000028948	ENSPEMG00000028122	ENSPEMG00000026727	ENSPEMG00000030232	ENSPEMG00000025809	ENSPEMG00000028988	ENSPEMG00000028408	Grid2 (ENSPEMG00000029150)	Atoh1 (ENSPEMG00000001659)	Smarcad1 (ENSPEMG00000001854)	Hpgds (ENSPEMG00000011127)	Qrfprl (ENSPEMG00000019610) ##22	Tnip3 (ENSPEMG00000019457)	Ndnf (ENSPEMG00000010763)	Prdm5 (ENSPEMG00000019722)	4930544G11Rik (ENSPEMG00000022849)	ENSPEMG00000027522	Mad2l1 (ENSPEMG00000021067)	Gng12 (ENSPEMG00000025022)	Gadd45a (ENSPEMG00000022414)	Serbp1 (ENSPEMG00000021232)	Il12rb2 (ENSPEMG00000021493)	Il23r (ENSPEMG00000020840)	Tacstd2 (ENSPEMG00000003281)	ENSPEMG00000031157	ENSPEMG00000027204	ENSPEMG00000027512
Prairie vole	MODERN SPECIES	353	Trappc12 (ENSMOCG00000002223)	Adi1 (ENSMOCG00000021025)	Rnaseh1 (ENSMOCG00000015522)	Rps7 (ENSMOCG00000014785)	Colec11 (ENSMOCG00000014421)	Allc (ENSMOCG00000000545)	ENSMOCG00000012384	Maob (ENSMOCG00000020444)	Maoa (ENSMOCG00000007575)	ENSMOCG00000017653	ENSMOCG00000013942	Atoh1 (ENSMOCG00000007284)	ENSMOCG00000009573	Smarcad1 (ENSMOCG00000017142)	Hpgds (ENSMOCG00000006347)	Qrfprl (ENSMOCG00000012303) #22	Tnip3 (ENSMOCG00000020430)	Ndnf (ENSMOCG00000013511)	Prdm5 (ENSMOCG00000016267)	Mad2l1 (ENSMOCG00000011109)	ENSMOCG00000019752	Gng12 (ENSMOCG00000017337)	Gadd45a (ENSMOCG00000014496)	Serbp1 (ENSMOCG00000015573)	Il12rb2 (ENSMOCG00000022701)	Il23r (ENSMOCG00000010821)	Tacstd2 (ENSMOCG00000008197)	Kcns3 (ENSMOCG00000007505)	Rdh14 (ENSMOCG00000005865)	Nt5c1b (ENSMOCG00000020580)	ENSMOCG00000013225
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00950000183169.C.d #23	ENSGT00940000157312 #24	ENSGT00940000153661.a.a ##25	ENSGT00940000156941 #26	ENSGT00940000154552.b #27	ENSGT00940000156162.C.k #28	ENSGT00940000160614 #30	ENSGT00940000154384.h.a #32	ENSGT00950000183189.a.b.a #33	ENSGT00390000015010 #34	ENSGT00390000013701.g.b ##35	ENSGT00390000013701.g.a ##35	ENSGT00940000155931 #36	ENSGT00940000157401 #37	ENSGT00390000009980
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	258					Gprin3 (ENSCGRG00001013859)	Snca (ENSCGRG00001011668)	Mmrn1 (ENSCGRG00001017542)	ENSCGRG00001014804	ENSCGRG00001013438	Ccser1 (ENSCGRG00001009069)	ENSCGRG00001023084	Grid2 (ENSCGRG00001011880)	Atoh1 (ENSCGRG00001015957)	Smarcad1 (ENSCGRG00001015056)	Hpgds (ENSCGRG00001011770)	Qrfprl (ENSCGRG00001010782) #22	Tnip3 (ENSCGRG00001000396)	Ndnf (ENSCGRG00001021230)	Prdm5 (ENSCGRG00001010581)	4930544G11Rik (ENSCGRG00001013500)	Mad2l1 (ENSCGRG00001012165)	ENSCGRG00001015322	ENSCGRG00001015231	ENSCGRG00001011328	ENSCGRG00001015392	Gng12 (ENSCGRG00001009920)	GADD45A (ENSCGRG00001022826)	ENSCGRG00001016800	ENSCGRG00001022516	Il23r (ENSCGRG00001014663)	Tacstd2 (ENSCGRG00001014553)
Chinese hamster chok1gshd	MODERN SPECIES	352	Spry1 (ENSCGRG00001009131)	Spata5 (ENSCGRG00001021381)	Nudt6 (ENSCGRG00001018080)	Fgf2 (ENSCGRG00001019372)	Bbs12 (ENSCGRG00001004097)	Cetn4 (ENSCGRG00001014508)	Il21 (ENSCGRG00001022512)	Il2 (ENSCGRG00001020461)	Adad1 (ENSCGRG00001010493)	Bltp1 (ENSCGRG00001009244)	Trpc3 (ENSCGRG00001021196)	Bbs7 (ENSCGRG00001022476)	Ccna2 (ENSCGRG00001021415)	Exosc9 (ENSCGRG00001023030)	Anxa5 (ENSCGRG00001011395) #19	Qrfpr (ENSCGRG00001015065) #22	Zfp267 (ENSCGRG00001019794) #23	Acad9 (ENSCGRG00001017444) #24	ENSCGRG00001017668 ##25	Mccc1 (ENSCGRG00001012469) #26	ENSCGRG00001019778 #27	ENSCGRG00001013592	Atp11b (ENSCGRG00001021308) #28	Sox2 (ENSCGRG00001008732) #30	ENSCGRG00001000090 #32	Fxr1 (ENSCGRG00001024795) #33	Ccdc39 (ENSCGRG00001018347) #34	Ttc14 (ENSCGRG00001021605) ##35	Pex5l (ENSCGRG00001018482) #36	Usp13 (ENSCGRG00001017123) #37	Ndufb5 (ENSCGRG00001005505)
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	675	ENSMAUG00000017964	Nap1l5 (ENSMAUG00000016101)	Fam13a (ENSMAUG00000019183)	Tigd2 (ENSMAUG00000000071)	Gprin3 (ENSMAUG00000000174)	ENSMAUG00000016044	Snca (ENSMAUG00000018763)	Mmrn1 (ENSMAUG00000000257)	ENSMAUG00000001236	Ccser1 (ENSMAUG00000001007)	Grid2 (ENSMAUG00000001680)	Atoh1 (ENSMAUG00000016206)	Smarcad1 (ENSMAUG00000008417)	Hpgds (ENSMAUG00000000292)	ENSMAUG00000001139	Qrfprl (ENSMAUG00000002934) #22	ENSMAUG00000005208	Tnip3 (ENSMAUG00000007890)	Ndnf (ENSMAUG00000010069)	Prdm5 (ENSMAUG00000006768)	4930544G11Rik (ENSMAUG00000016259)	Mad2l1 (ENSMAUG00000012179)	ENSMAUG00000019235	Gadd45a (ENSMAUG00000013029)	Serbp1 (ENSMAUG00000013517)	ENSMAUG00000012848	Il23r (ENSMAUG00000014424)	Tacstd2 (ENSMAUG00000016395)	ENSMAUG00000016422	ENSMAUG00000014450	ENSMAUG00000016790
Golden Hamster	MODERN SPECIES	636	Spry1 (ENSMAUG00000016633)	Spata5 (ENSMAUG00000012654)	Nudt6 (ENSMAUG00000015235)	Fgf2 (ENSMAUG00000014645)	Bbs12 (ENSMAUG00000014987)	Cetn4 (ENSMAUG00000000102)	Il21 (ENSMAUG00000000414)	Il2 (ENSMAUG00000017109)	Adad1 (ENSMAUG00000018314)	Bltp1 (ENSMAUG00000017326)	ENSMAUG00000009808	Bbs7 (ENSMAUG00000001973)	Ccna2 (ENSMAUG00000018247)	Exosc9 (ENSMAUG00000008629)	Anxa5 (ENSMAUG00000014445) #19	Qrfpr (ENSMAUG00000016873) #22	Zfp267 (ENSMAUG00000000240) #23	Acad9 (ENSMAUG00000013695) #24	ENSMAUG00000011985 ##25	ENSMAUG00000000987	Mccc1 (ENSMAUG00000018926) #26	ENSMAUG00000019275	ENSMAUG00000018021 #27	Atp11b (ENSMAUG00000000325) #28	Sox2 (ENSMAUG00000017052) #30	ENSMAUG00000011285 #32	Fxr1 (ENSMAUG00000001188) #33	Ccdc39 (ENSMAUG00000009369) #34	ENSMAUG00000000140 ##35	ENSMAUG00000009258 ##35	Pex5l (ENSMAUG00000011108) #36
Murinae	ANCESTRAL SPECIES	4	ENSGT00960000190929	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198	ENSGT00390000018245.d	ENSGT00940000153094.n	ENSGT00940000163478	ENSGT00390000004352
Mus	ANCESTRAL SPECIES	12	ENSGT00960000190929	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198	ENSGT00390000018245.d	ENSGT00950000186518	ENSGT00950000186487	ENSGT00950000186503
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	11	Vopp1 (MGP_PahariEiJ_G0022185)	Vmn1r21 (MGP_PahariEiJ_G0022186)	Abcg2 (MGP_PahariEiJ_G0022187)	Herc3 (MGP_PahariEiJ_G0022188)	Nap1l5 (MGP_PahariEiJ_G0022189)	Fam13a (MGP_PahariEiJ_G0022190)	Tigd2 (MGP_PahariEiJ_G0022191)	Gprin3 (MGP_PahariEiJ_G0022192)	Snca (MGP_PahariEiJ_G0022193)	Mmrn1 (MGP_PahariEiJ_G0022194)	Ccser1 (MGP_PahariEiJ_G0022195)	Grid2 (MGP_PahariEiJ_G0022196)	Atoh1 (MGP_PahariEiJ_G0022197)	Smarcad1 (MGP_PahariEiJ_G0022198)	Hpgds (MGP_PahariEiJ_G0022199)	Qrfprl (MGP_PahariEiJ_G0022200) #22	MGP_PahariEiJ_G0022201	Ndnf (MGP_PahariEiJ_G0022202)	Prdm5 (MGP_PahariEiJ_G0022203)	4930544G11Rik (MGP_PahariEiJ_G0022204)	Mad2l1 (MGP_PahariEiJ_G0022205)	Gng12 (MGP_PahariEiJ_G0022206)	Gadd45a (MGP_PahariEiJ_G0022207)	Serbp1 (MGP_PahariEiJ_G0022208)	Il12rb2 (MGP_PahariEiJ_G0022209)	Il23r (MGP_PahariEiJ_G0022210)	Tacstd2 (MGP_PahariEiJ_G0022211)	Igkj1 (MGP_PahariEiJ_G0000020)	Igkj2 (MGP_PahariEiJ_G0000021)	MGP_PahariEiJ_G0000022	Igkj4 (MGP_PahariEiJ_G0000023)
Shrew mouse	MODERN SPECIES	17	Spata5 (MGP_PahariEiJ_G0026391)	Nudt6 (MGP_PahariEiJ_G0026390)	Fgf2 (MGP_PahariEiJ_G0026389)	Bbs12 (MGP_PahariEiJ_G0026388)	Cetn4 (MGP_PahariEiJ_G0026387)	Il21 (MGP_PahariEiJ_G0026386)	Il2 (MGP_PahariEiJ_G0026385)	Adad1 (MGP_PahariEiJ_G0026384)	Bltp1 (MGP_PahariEiJ_G0026383)	Trpc3 (MGP_PahariEiJ_G0026382)	Bbs7 (MGP_PahariEiJ_G0026381)	Ccna2 (MGP_PahariEiJ_G0026380)	Exosc9 (MGP_PahariEiJ_G0026379)	MGP_PahariEiJ_G0026378	Anxa5 (MGP_PahariEiJ_G0026377) #19	Qrfpr (MGP_PahariEiJ_G0026376) #22	Zfp267 (MGP_PahariEiJ_G0026375) #23	MGP_PahariEiJ_G0026374 #27	Sox2 (MGP_PahariEiJ_G0026373) #30	Dnajc19 (MGP_PahariEiJ_G0026372) ##32	Fxr1 (MGP_PahariEiJ_G0026371) #33	MGP_PahariEiJ_G0026370 #35	Pex5l (MGP_PahariEiJ_G0026369) #36	Usp13 (MGP_PahariEiJ_G0026368) #37	Ndufb5 (MGP_PahariEiJ_G0026367)	Mrpl47 (MGP_PahariEiJ_G0026366)	Actl6a (MGP_PahariEiJ_G0026365)	Gnb4 (MGP_PahariEiJ_G0026364)	Mfn1 (MGP_PahariEiJ_G0026363)	Zfp639 (MGP_PahariEiJ_G0026362)	Kcnmb3 (MGP_PahariEiJ_G0026361)
Mus_A	ANCESTRAL SPECIES	7	ENSGT00960000190929	ENSGT00940000156633	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.b	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198	ENSGT00390000018245.d	ENSGT00940000154279.e.b.c.b.b
Mus_B	ANCESTRAL SPECIES	20	ENSGT01030000234553.b.b.d.c.a.o.b.a.a.b.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.b.a.b	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.a.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.b	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829
Mus_C	ANCESTRAL SPECIES	19	ENSGT01030000234553.b.b.d.c.a.o.b.a.a.b.a	ENSGT00940000160729.g	ENSGT00940000158189	ENSGT00730000111564	ENSGT00950000183033.a.b.a	ENSGT00940000162273	ENSGT00570000079168.b.b.b	ENSGT00840000132152.c.a.a	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.a.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.a	ENSGT01100000263497.E.b	ENSGT00950000182964.a.a	ENSGT00520000055591.a	ENSGT00940000159829	ENSGT00530000064198
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2872															ENSMSIG00000004185	ENSMSIG00000004148 #22	Tnip3 (ENSMSIG00000004021)	ENSMSIG00000004013	Ndnf (ENSMSIG00000003987)	ENSMSIG00000003978	ENSMSIG00000003900	4930544G11Rik (ENSMSIG00000003886)	ENSMSIG00000003860	ENSMSIG00000003837	Mad2l1 (ENSMSIG00000003777)	Vmn1r32 (ENSMSIG00000003768)	Vmn1r33 (ENSMSIG00000003765)	Vmn1r34 (ENSMSIG00000003740)	Vmn1r35 (ENSMSIG00000003722)	ENSMSIG00000003614	Vmn1r39 (ENSMSIG00000003551)
Steppe mouse	MODERN SPECIES	2551																Qrfpr (ENSMSIG00000027255) #22	Zfp267 (ENSMSIG00000027264) #23	ENSMSIG00000027271	Acad9 (ENSMSIG00000027275) #24	ENSMSIG00000027289 ##25	ENSMSIG00000027323	Mccc1 (ENSMSIG00000027328) #26	ENSMSIG00000027365 #27	Atp11b (ENSMSIG00000027378) #28
spretus	DUPLICATION
spretus	MODERN SPECIES	15	MGP_SPRETEiJ_G0029449	MGP_SPRETEiJ_G0029450	Herc3 (MGP_SPRETEiJ_G0029451)	Nap1l5 (MGP_SPRETEiJ_G0029452)	Fam13a (MGP_SPRETEiJ_G0029453)	Tigd2 (MGP_SPRETEiJ_G0029454)	Gprin3 (MGP_SPRETEiJ_G0029455)	MGP_SPRETEiJ_G0029456	Snca (MGP_SPRETEiJ_G0029457)	Mmrn1 (MGP_SPRETEiJ_G0029458)	Ccser1 (MGP_SPRETEiJ_G0029459)	Grid2 (MGP_SPRETEiJ_G0029460)	Atoh1 (MGP_SPRETEiJ_G0029461)	Smarcad1 (MGP_SPRETEiJ_G0029462)	Hpgds (MGP_SPRETEiJ_G0029463)	Qrfprl (MGP_SPRETEiJ_G0029464) #22	MGP_SPRETEiJ_G0029465	Ndnf (MGP_SPRETEiJ_G0029466)	Prdm5 (MGP_SPRETEiJ_G0029467)	4930544G11Rik (MGP_SPRETEiJ_G0029468)	Mad2l1 (MGP_SPRETEiJ_G0029469)	MGP_SPRETEiJ_G0029470	MGP_SPRETEiJ_G0029471	MGP_SPRETEiJ_G0029472	MGP_SPRETEiJ_G0029473	Vmn1r38 (MGP_SPRETEiJ_G0029474)	Gng12 (MGP_SPRETEiJ_G0029475)	Gadd45a (MGP_SPRETEiJ_G0029476)	Serbp1 (MGP_SPRETEiJ_G0029477)	Il12rb2 (MGP_SPRETEiJ_G0029478)	Il23r (MGP_SPRETEiJ_G0029479)
spretus	MODERN SPECIES	12	Spata5 (MGP_SPRETEiJ_G0025885)	Nudt6 (MGP_SPRETEiJ_G0025884)	Fgf2 (MGP_SPRETEiJ_G0025883)	Bbs12 (MGP_SPRETEiJ_G0025882)	Cetn4 (MGP_SPRETEiJ_G0025881)	Il21 (MGP_SPRETEiJ_G0025880)	Il2 (MGP_SPRETEiJ_G0025879)	MGP_SPRETEiJ_G0025878	MGP_SPRETEiJ_G0025877	Trpc3 (MGP_SPRETEiJ_G0025876)	Bbs7 (MGP_SPRETEiJ_G0025875)	Ccna2 (MGP_SPRETEiJ_G0025874)	Exosc9 (MGP_SPRETEiJ_G0025873)	MGP_SPRETEiJ_G0025872	Anxa5 (MGP_SPRETEiJ_G0025871) #19	Qrfpr (MGP_SPRETEiJ_G0025870) #22	Zfp267 (MGP_SPRETEiJ_G0025869) #23	Acad9 (MGP_SPRETEiJ_G0025868) #24	MGP_SPRETEiJ_G0025867 ##25	Mccc1 (MGP_SPRETEiJ_G0025866) #26	MGP_SPRETEiJ_G0025865 #27	Atp11b (MGP_SPRETEiJ_G0025864) #28	Sox2 (MGP_SPRETEiJ_G0025863) #30	Dnajc19 (MGP_SPRETEiJ_G0025862) ##32	Fxr1 (MGP_SPRETEiJ_G0025861) #33	Ccdc39 (MGP_SPRETEiJ_G0025860) #34	Ttc14 (MGP_SPRETEiJ_G0025859) #35	Pex5l (MGP_SPRETEiJ_G0025858) #36	Usp13 (MGP_SPRETEiJ_G0025857) #37	Ndufb5 (MGP_SPRETEiJ_G0025856)	Mrpl47 (MGP_SPRETEiJ_G0025855)
Mouse	DUPLICATION
Mouse	MODERN SPECIES	15	Vmn1r30 (ENSMUSG00000095670)	Vmn1r31 (ENSMUSG00000115404)	Abcg2 (ENSMUSG00000029802)	Herc3 (ENSMUSG00000029804)	Nap1l5 (ENSMUSG00000055430)	Fam13a (ENSMUSG00000037709)	Tigd2 (ENSMUSG00000049232)	Gprin3 (ENSMUSG00000045441)	Snca (ENSMUSG00000025889)	Mmrn1 (ENSMUSG00000054641)	Ccser1 (ENSMUSG00000039578)	Grid2 (ENSMUSG00000071424)	Atoh1 (ENSMUSG00000073043)	Smarcad1 (ENSMUSG00000029920)	Hpgds (ENSMUSG00000029919)	Qrfprl (ENSMUSG00000029917) #22	Tnip3 (ENSMUSG00000044162)	Ndnf (ENSMUSG00000049001)	Prdm5 (ENSMUSG00000029913)	4930544G11Rik (ENSMUSG00000036463)	Mad2l1 (ENSMUSG00000029910)	Vmn1r32 (ENSMUSG00000062905)	Vmn1r33 (ENSMUSG00000059375)	Vmn1r34 (ENSMUSG00000091012)	Vmn1r35 (ENSMUSG00000060699)	Vmn1r36 (ENSMUSG00000115482)	Vmn1r37 (ENSMUSG00000115467)	Vmn1r38 (ENSMUSG00000115170)	Vmn1r39 (ENSMUSG00000093755)	Gng12 (ENSMUSG00000036402)	Gadd45a (ENSMUSG00000036390)
Mouse	MODERN SPECIES	12	Nudt6 (ENSMUSG00000050174)	Fgf2 (ENSMUSG00000037225)	Bbs12 (ENSMUSG00000051444)	Cetn4 (ENSMUSG00000045031)	Il21 (ENSMUSG00000027718)	Il2 (ENSMUSG00000027720)	Adad1 (ENSMUSG00000027719)	Bltp1 (ENSMUSG00000037270)	Trpc3 (ENSMUSG00000027716)	Bbs7 (ENSMUSG00000037325)	Ccna2 (ENSMUSG00000027715)	Exosc9 (ENSMUSG00000027714)	Smim43 (ENSMUSG00000085007)	1810062G17Rik (ENSMUSG00000027713)	Anxa5 (ENSMUSG00000027712) #19	Qrfpr (ENSMUSG00000058400) #22	Zfp267 (ENSMUSG00000033883) #23	Acad9 (ENSMUSG00000027710) #24	Ccdc144b (ENSMUSG00000047696) #25	Mccc1 (ENSMUSG00000027709) #26	Dcun1d1 (ENSMUSG00000027708) #27	Atp11b (ENSMUSG00000037400) #28	Sox2 (ENSMUSG00000074637) #30	Dnajc19 (ENSMUSG00000027679) ##32	Fxr1 (ENSMUSG00000027680) #33	Ccdc39 (ENSMUSG00000027676) #34	Ttc14 (ENSMUSG00000027677) #35	Pex5l (ENSMUSG00000027674) #36	Usp13 (ENSMUSG00000056900) #37	Ndufb5 (ENSMUSG00000027673)	Mrpl47 (ENSMUSG00000037531)
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES	15	Ppm1k (MGP_CAROLIEiJ_G0028445)	Abcg2 (MGP_CAROLIEiJ_G0028446)	Herc3 (MGP_CAROLIEiJ_G0028447)	Nap1l5 (MGP_CAROLIEiJ_G0028448)	Fam13a (MGP_CAROLIEiJ_G0028449)	Tigd2 (MGP_CAROLIEiJ_G0028450)	Gprin3 (MGP_CAROLIEiJ_G0028451)	Snca (MGP_CAROLIEiJ_G0028452)	Mmrn1 (MGP_CAROLIEiJ_G0028453)	Ccser1 (MGP_CAROLIEiJ_G0028454)	Grid2 (MGP_CAROLIEiJ_G0028455)	MGP_CAROLIEiJ_G0028456	Atoh1 (MGP_CAROLIEiJ_G0028457)	MGP_CAROLIEiJ_G0028458	Hpgds (MGP_CAROLIEiJ_G0028459)	Qrfprl (MGP_CAROLIEiJ_G0028460) #22	Tnip3 (MGP_CAROLIEiJ_G0028461)	Ndnf (MGP_CAROLIEiJ_G0028462)	Prdm5 (MGP_CAROLIEiJ_G0028463)	4930544G11Rik (MGP_CAROLIEiJ_G0028464)	Mad2l1 (MGP_CAROLIEiJ_G0028465)	Vmn1r32 (MGP_CAROLIEiJ_G0028466)	Vmn1r38 (MGP_CAROLIEiJ_G0028467)	MGP_CAROLIEiJ_G0028468	MGP_CAROLIEiJ_G0028469	Gng12 (MGP_CAROLIEiJ_G0028470)	Gadd45a (MGP_CAROLIEiJ_G0028471)	Serbp1 (MGP_CAROLIEiJ_G0028472)	Il12rb2 (MGP_CAROLIEiJ_G0028473)	Il23r (MGP_CAROLIEiJ_G0028474)	Tacstd2 (MGP_CAROLIEiJ_G0028475)
Ryukyu mouse	MODERN SPECIES	12	Spata5 (MGP_CAROLIEiJ_G0024951)	Nudt6 (MGP_CAROLIEiJ_G0024950)	Fgf2 (MGP_CAROLIEiJ_G0024949)	Bbs12 (MGP_CAROLIEiJ_G0024948)	Cetn4 (MGP_CAROLIEiJ_G0024947)	Il21 (MGP_CAROLIEiJ_G0024946)	Il2 (MGP_CAROLIEiJ_G0024945)	Adad1 (MGP_CAROLIEiJ_G0024944)	Bltp1 (MGP_CAROLIEiJ_G0024943)	Trpc3 (MGP_CAROLIEiJ_G0024942)	Bbs7 (MGP_CAROLIEiJ_G0024941)	Ccna2 (MGP_CAROLIEiJ_G0024940)	Exosc9 (MGP_CAROLIEiJ_G0024939)	MGP_CAROLIEiJ_G0024938	Anxa5 (MGP_CAROLIEiJ_G0024937) #19	Qrfpr (MGP_CAROLIEiJ_G0024936) #22	Zfp267 (MGP_CAROLIEiJ_G0024935) #23	MGP_CAROLIEiJ_G0024934 #24	MGP_CAROLIEiJ_G0024933 #25	Mccc1 (MGP_CAROLIEiJ_G0024932) #26	MGP_CAROLIEiJ_G0024931 #27	Atp11b (MGP_CAROLIEiJ_G0024930) #28	Sox2 (MGP_CAROLIEiJ_G0024929) #30	MGP_CAROLIEiJ_G0024928 ##32	Fxr1 (MGP_CAROLIEiJ_G0024927) #33	Ccdc39 (MGP_CAROLIEiJ_G0024926) #34	Ttc14 (MGP_CAROLIEiJ_G0024925) #35	Pex5l (MGP_CAROLIEiJ_G0024924) #36	Usp13 (MGP_CAROLIEiJ_G0024923) #37	Ndufb5 (MGP_CAROLIEiJ_G0024922)	Mrpl47 (MGP_CAROLIEiJ_G0024921)
Rat	DUPLICATION
Rat	MODERN SPECIES	14	ENSRNOG00000069908	AABR07060694.1 (ENSRNOG00000057158)	AABR07060700.1 (ENSRNOG00000060808)	ENSRNOG00000066882	ENSRNOG00000068395	ENSRNOG00000066361	Snca (ENSRNOG00000008656)	Mmrn1 (ENSRNOG00000024986)	Ccser1 (ENSRNOG00000029321)	AABR07060778.1 (ENSRNOG00000005630)	ENSRNOG00000066686	Grid2 (ENSRNOG00000006174)	Atoh1 (ENSRNOG00000006383)	Smarcad1 (ENSRNOG00000006391)	Hpgds (ENSRNOG00000006583)	Qrfprl (ENSRNOG00000006782) #22	Tnip3 (ENSRNOG00000064111)	Ndnf (ENSRNOG00000006857)	Prdm5 (ENSRNOG00000023679)	RSA-14-44 (ENSRNOG00000042954)	ENSRNOG00000069727	Mad2l1 (ENSRNOG00000005376)	Vom1r89 (ENSRNOG00000070369)	Gng12 (ENSRNOG00000050231)	Gadd45a (ENSRNOG00000005615)	Serbp1 (ENSRNOG00000005890)	Il12rb2 (ENSRNOG00000007270)	Il23r (ENSRNOG00000007544)	Tacstd2 (ENSRNOG00000007740)	ENSRNOG00000064041	ENSRNOG00000068649
Rat	MODERN SPECIES	11	Spata5 (ENSRNOG00000017462)	Nudt6 (ENSRNOG00000017420)	Fgf2 (ENSRNOG00000017392)	Bbs12 (ENSRNOG00000068263)	Cetn4 (ENSRNOG00000026162)	Il21 (ENSRNOG00000017376)	Il2 (ENSRNOG00000017348)	Adad1 (ENSRNOG00000017246)	Bltp1 (ENSRNOG00000038436)	Trpc3 (ENSRNOG00000016070)	Bbs7 (ENSRNOG00000015816)	Ccna2 (ENSRNOG00000015423)	Exosc9 (ENSRNOG00000014674)	Smim43 (ENSRNOG00000070831)	Anxa5 (ENSRNOG00000014453) #19	Qrfpr (ENSRNOG00000014414) #22	Arsl (ENSRNOG00000028350)	ENSRNOG00000066024	Zfp267 (ENSRNOG00000042283) #23	Acad9 (ENSRNOG00000014178) #24	ENSRNOG00000065565	Ccdc144b (ENSRNOG00000056177) ##25	Mccc1 (ENSRNOG00000013293) #26	Dcun1d1 (ENSRNOG00000012734) #27	Atp11b (ENSRNOG00000052116) #28	Sox2 (ENSRNOG00000012199) #30	Dnajc19 (ENSRNOG00000049819) ##32	Fxr1 (ENSRNOG00000051480) #33	Ccdc39 (ENSRNOG00000011440) #34	Ttc14 (ENSRNOG00000011261) #35	Pex5l (ENSRNOG00000011211) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1276	ENSNGAG00000002047	Abcg2 (ENSNGAG00000008703)	Nap1l5 (ENSNGAG00000019469)	Herc3 (ENSNGAG00000001945)	Fam13a (ENSNGAG00000016431)	Tigd2 (ENSNGAG00000013979)	Gprin3 (ENSNGAG00000000029)	Snca (ENSNGAG00000017413)	Mmrn1 (ENSNGAG00000013643)	ENSNGAG00000014274	ENSNGAG00000012453	Grid2 (ENSNGAG00000018830)	Atoh1 (ENSNGAG00000017323)	Smarcad1 (ENSNGAG00000000810)	Hpgds (ENSNGAG00000012687)	Qrfprl (ENSNGAG00000010835) #22	Tnip3 (ENSNGAG00000013422)	Ndnf (ENSNGAG00000012166)	Prdm5 (ENSNGAG00000018317)	ENSNGAG00000020137	Mad2l1 (ENSNGAG00000019258)	ENSNGAG00000011475	Gng12 (ENSNGAG00000004651)	Gadd45a (ENSNGAG00000010577)	ENSNGAG00000019203	ENSNGAG00000014083	Il23r (ENSNGAG00000017497)
Lesser Egyptian jerboa	MODERN SPECIES	67	Cav1 (ENSJJAG00000021423)	Cav2 (ENSJJAG00000020789)	ENSJJAG00000019082	Tfec (ENSJJAG00000015649)	ENSJJAG00000012867	Mdfic (ENSJJAG00000012683)	ENSJJAG00000016852	Ppp1r3a (ENSJJAG00000014929)	ENSJJAG00000012600	ENSJJAG00000011795	Grid2 (ENSJJAG00000010736)	Atoh1 (ENSJJAG00000001013)	ENSJJAG00000023468	Smarcad1 (ENSJJAG00000022342)	Hpgds (ENSJJAG00000020796)	Qrfprl (ENSJJAG00000017977) #22	ENSJJAG00000000554	Ndnf (ENSJJAG00000023194)	Prdm5 (ENSJJAG00000011464)	Mad2l1 (ENSJJAG00000019335)	ENSJJAG00000014666	Pde5a (ENSJJAG00000018246)	Fabp2 (ENSJJAG00000016393)	1810037I17Rik (ENSJJAG00000014222)	ENSJJAG00000019057	Myoz2 (ENSJJAG00000017680)	Synpo2 (ENSJJAG00000012840)	Sec24d (ENSJJAG00000009995)	Mettl14 (ENSJJAG00000010557)	Prss12 (ENSJJAG00000012007)	Ndst3 (ENSJJAG00000002218)
Kangaroo rat	MODERN SPECIES	379	Spry1 (ENSDORG00000014328)	Spata5 (ENSDORG00000000525)	Nudt6 (ENSDORG00000026866)	Fgf2 (ENSDORG00000027523)	ENSDORG00000013293	ENSDORG00000029033	Il21 (ENSDORG00000005664)	Il2 (ENSDORG00000014968)	Adad1 (ENSDORG00000015684)	Bltp1 (ENSDORG00000015310)	Trpc3 (ENSDORG00000015847)	Bbs7 (ENSDORG00000007687)	Ccna2 (ENSDORG00000007686)	Exosc9 (ENSDORG00000007684)	Anxa5 (ENSDORG00000006577) #19	Qrfpr (ENSDORG00000013419) #22	ENSDORG00000005102	Ndnf (ENSDORG00000003957)	Prdm5 (ENSDORG00000007739)	Mad2l1 (ENSDORG00000000355)
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Hystricomorpha	ANCESTRAL SPECIES	38	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Hystricomorpha_b	ANCESTRAL SPECIES	75	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Long-tailed chinchilla	MODERN SPECIES	135	SPATA5 (ENSCLAG00000005265)	NUDT6 (ENSCLAG00000006306)	FGF2 (ENSCLAG00000003340)	ENSCLAG00000008111	BBS12 (ENSCLAG00000017705)	IL21 (ENSCLAG00000009098)	IL2 (ENSCLAG00000009317)	ADAD1 (ENSCLAG00000004688)	BLTP1 (ENSCLAG00000007818)	TRPC3 (ENSCLAG00000003574)	BBS7 (ENSCLAG00000004340)	CCNA2 (ENSCLAG00000003880)	EXOSC9 (ENSCLAG00000004644)	ANXA5 (ENSCLAG00000004278) #19	ENSCLAG00000005382	QRFPR (ENSCLAG00000006789) #22	TNIP3 (ENSCLAG00000004304)	NDNF (ENSCLAG00000004819)	PRDM5 (ENSCLAG00000005392)	ENSCLAG00000003295	MAD2L1 (ENSCLAG00000003756)	PDE5A (ENSCLAG00000004806)	FABP2 (ENSCLAG00000004293)	C4orf3 (ENSCLAG00000005064)	USP53 (ENSCLAG00000005403)	MYOZ2 (ENSCLAG00000003567)	SYNPO2 (ENSCLAG00000004412)	SEC24D (ENSCLAG00000009632)	METTL14 (ENSCLAG00000013189)	PRSS12 (ENSCLAG00000003330)	NDST3 (ENSCLAG00000004346)
Degu	MODERN SPECIES	237																QRFPR (ENSODEG00000011261) #22	ENSODEG00000009181	NDNF (ENSODEG00000008963)	PRDM5 (ENSODEG00000009133)	MAD2L1 (ENSODEG00000008659)	ENSODEG00000009337	ENSODEG00000009724	PDE5A (ENSODEG00000009775)	FABP2 (ENSODEG00000009356)	ENSODEG00000009751	C4orf3 (ENSODEG00000009429)	MYOZ2 (ENSODEG00000010060)	SYNPO2 (ENSODEG00000008964)	ENSODEG00000009862	SEC24D (ENSODEG00000009782)	ENSODEG00000008761
Guinea pig	MODERN SPECIES	7	SPRY1 (ENSCPOG00000035769)	SPATA5 (ENSCPOG00000005397)	ENSCPOG00000030140	FGF2 (ENSCPOG00000005386)	BBS12 (ENSCPOG00000005539)	ENSCPOG00000021793	IL21 (ENSCPOG00000012431)	IL2 (ENSCPOG00000008265)	ADAD1 (ENSCPOG00000014455)	BLTP1 (ENSCPOG00000010581)	TRPC3 (ENSCPOG00000001231)	BBS7 (ENSCPOG00000001229)	CCNA2 (ENSCPOG00000010373)	EXOSC9 (ENSCPOG00000034344)	ANXA5 (ENSCPOG00000038586) #19	QRFPR (ENSCPOG00000001530) #22	TNIP3 (ENSCPOG00000003813)	NDNF (ENSCPOG00000009703)	PRDM5 (ENSCPOG00000012883)	MAD2L1 (ENSCPOG00000030145)	PDE5A (ENSCPOG00000008756)	FABP2 (ENSCPOG00000008750)	C4orf3 (ENSCPOG00000021561)	ENSCPOG00000001323	MYOZ2 (ENSCPOG00000007291)	SYNPO2 (ENSCPOG00000020548)	SEC24D (ENSCPOG00000004621)	METTL14 (ENSCPOG00000037880)	PRSS12 (ENSCPOG00000010027)	NDST3 (ENSCPOG00000003838)
Naked mole-rat female	MODERN SPECIES	22	SPATA5 (ENSHGLG00000002665)	NUDT6 (ENSHGLG00000040807)	ENSHGLG00000032095	ANKRD50 (ENSHGLG00000010124)	ENSHGLG00000010627	ENSHGLG00000047556	ENSHGLG00000003394	ENSHGLG00000003167	BBS7 (ENSHGLG00000002879)	ENSHGLG00000002599	EXOSC9 (ENSHGLG00000002467)	SMIM43 (ENSHGLG00000036790)	ENSHGLG00000035708 #19	ENSHGLG00000038676	ENSHGLG00000002280	ENSHGLG00000004934 #22	ENSHGLG00000033298	TNIP3 (ENSHGLG00000003668)	NDNF (ENSHGLG00000003417)	PRDM5 (ENSHGLG00000003010)	ENSHGLG00000040170	ENSHGLG00000004064	ENSHGLG00000047434	ENSHGLG00000000181	ENSHGLG00000049304	PDE5A (ENSHGLG00000000160)	ENSHGLG00000050894	USP53 (ENSHGLG00000047262)	ENSHGLG00000045384	MYOZ2 (ENSHGLG00000004531)	SYNPO2 (ENSHGLG00000038567)
Sciuridae	ANCESTRAL SPECIES	38	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT01060000248649.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00390000014067
Marmotini	ANCESTRAL SPECIES	45	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a
Alpin marmot	MODERN SPECIES	5	SPATA5 (ENSMMMG00000014189)	ENSMMMG00000014177	FGF2 (ENSMMMG00000014167)	BBS12 (ENSMMMG00000014165)	ENSMMMG00000014128	ENSMMMG00000014115	IL21 (ENSMMMG00000014088)	IL2 (ENSMMMG00000014074)	ADAD1 (ENSMMMG00000014047)	BLTP1 (ENSMMMG00000013870)	TRPC3 (ENSMMMG00000013843)	BBS7 (ENSMMMG00000013792)	CCNA2 (ENSMMMG00000013774)	EXOSC9 (ENSMMMG00000013752)	ANXA5 (ENSMMMG00000013732) #19	QRFPR (ENSMMMG00000013643) #22	ENSMMMG00000013612	NDNF (ENSMMMG00000013604)	PRDM5 (ENSMMMG00000013584)	MAD2L1 (ENSMMMG00000013561)
Marmotini_b	ANCESTRAL SPECIES	148	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a
Arctic ground squirrel	MODERN SPECIES	504										TRPC3 (ENSUPAG00010003020)	BBS7 (ENSUPAG00010003036)	CCNA2 (ENSUPAG00010003078)	EXOSC9 (ENSUPAG00010003098)	SMIM43 (ENSUPAG00010003133)	ANXA5 (ENSUPAG00010003144) #19	QRFPR (ENSUPAG00010003178) #22	ENSUPAG00010003212	NDNF (ENSUPAG00010003281)	PRDM5 (ENSUPAG00010003287)	MAD2L1 (ENSUPAG00010003371)
Squirrel	MODERN SPECIES	262	SPRY1 (ENSSTOG00000019856)	SPATA5 (ENSSTOG00000016252)	NUDT6 (ENSSTOG00000020437)	FGF2 (ENSSTOG00000028359)	BBS12 (ENSSTOG00000010337)	ENSSTOG00000024309	IL21 (ENSSTOG00000012108)	IL2 (ENSSTOG00000016100)	ADAD1 (ENSSTOG00000027523)	BLTP1 (ENSSTOG00000016095)	TRPC3 (ENSSTOG00000014731)	BBS7 (ENSSTOG00000026947)	CCNA2 (ENSSTOG00000008011)	EXOSC9 (ENSSTOG00000007984)	ANXA5 (ENSSTOG00000015236) #19	QRFPR (ENSSTOG00000011128) #22	ENSSTOG00000002218	NDNF (ENSSTOG00000026308)	PRDM5 (ENSSTOG00000004741)	MAD2L1 (ENSSTOG00000025410)
Eurasian red squirrel	MODERN SPECIES	18	FGF2 (ENSSVLG00005016503)	BBS12 (ENSSVLG00005016487)	ENSSVLG00005016460	ENSSVLG00005016447	IL21 (ENSSVLG00005016343)	IL2 (ENSSVLG00005016296)	ENSSVLG00005016021	BLTP1 (ENSSVLG00005015963)	TRPC3 (ENSSVLG00005015770)	BBS7 (ENSSVLG00005015419)	CCNA2 (ENSSVLG00005015372)	ENSSVLG00005015214	SMIM43 (ENSSVLG00005015189)	ANXA5 (ENSSVLG00005014980) #19	ENSSVLG00005014925	QRFPR (ENSSVLG00005014858) #22	NDNF (ENSSVLG00005014362)	PRDM5 (ENSSVLG00005014293)	MAD2L1 (ENSSVLG00005014204)	ENSSVLG00005014083	PDE5A (ENSSVLG00005013841)	FABP2 (ENSSVLG00005013640)	USP53 (ENSSVLG00005013592)	MYOZ2 (ENSSVLG00005013483)	ENSSVLG00005013417	SEC24D (ENSSVLG00005013288)	METTL14 (ENSSVLG00005013085)	PRSS12 (ENSSVLG00005012955)	ENSSVLG00005012895	ENSSVLG00005012798	ENSSVLG00005012769
Lagomorpha	ANCESTRAL SPECIES	93	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Rabbit	MODERN SPECIES	6	IL-2 (ENSOCUG00000010100)	ADAD1 (ENSOCUG00000012989)	BLTP1 (ENSOCUG00000014811)	TRPC3 (ENSOCUG00000009487)	ENSOCUG00000031507	ENSOCUG00000030634	ENSOCUG00000034627	ENSOCUG00000036368	BBS7 (ENSOCUG00000003053)	ENSOCUG00000028042	EXOSC9 (ENSOCUG00000003046)	SMIM43 (ENSOCUG00000038273)	ANXA5 (ENSOCUG00000017760) #19	ENSOCUG00000007852	ENSOCUG00000016694	QRFPR (ENSOCUG00000000563) #22	TNIP3 (ENSOCUG00000001973)	NDNF (ENSOCUG00000002038)	ENSOCUG00000036546	PRDM5 (ENSOCUG00000013454)	MAD2L1 (ENSOCUG00000008243)	PDE5A (ENSOCUG00000009417)	FABP2 (ENSOCUG00000003293)	ENSOCUG00000030903	USP53 (ENSOCUG00000013733)	MYOZ2 (ENSOCUG00000008959)	SYNPO2 (ENSOCUG00000008953)	SEC24D (ENSOCUG00000013272)	METTL14 (ENSOCUG00000003062)	KIT (ENSOCUG00000007086)	KDR (ENSOCUG00000005062)
Pika	MODERN SPECIES	4165																QRFPR (ENSOPRG00000005951) #22
Tree shrew	MODERN SPECIES	1871																QRFPR (ENSTBEG00000015868) #22	TNIP3 (ENSTBEG00000015633)	NDNF (ENSTBEG00000015454)	PRDM5 (ENSTBEG00000015386)
Primates	ANCESTRAL SPECIES	10	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.sb	ENSGT00910000146657	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00940000157323	ENSGT00390000004832.d	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00910000146657	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Hominidae	ANCESTRAL SPECIES	12	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Gorilla	MODERN SPECIES	17	SPATA5 (ENSGGOG00000000590)	NUDT6 (ENSGGOG00000023860)	ENSGGOG00000039455	BBS12 (ENSGGOG00000024815)	IL21 (ENSGGOG00000008002)	IL2 (ENSGGOG00000023337)	ADAD1 (ENSGGOG00000004388)	BLTP1 (ENSGGOG00000009991)	TRPC3 (ENSGGOG00000004558)	BBS7 (ENSGGOG00000002169)	CCNA2 (ENSGGOG00000002166)	EXOSC9 (ENSGGOG00000028227)	TMEM155 (ENSGGOG00000039647)	ANXA5 (ENSGGOG00000016680) #19	ENSGGOG00000022210	QRFPR (ENSGGOG00000008131) #22	ENSGGOG00000012377	NDNF (ENSGGOG00000008613)	PRDM5 (ENSGGOG00000013562)	ENSGGOG00000016645	MAD2L1 (ENSGGOG00000002516)	PDE5A (ENSGGOG00000013689)	FABP2 (ENSGGOG00000027841)	C4orf3 (ENSGGOG00000006489)	USP53 (ENSGGOG00000006480)	MYOZ2 (ENSGGOG00000010448)	SYNPO2 (ENSGGOG00000012942)	SEC24D (ENSGGOG00000002496)	METTL14 (ENSGGOG00000016449)	CEP170 (ENSGGOG00000016268)	PRSS12 (ENSGGOG00000002810)
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Pan	ANCESTRAL SPECIES	7	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000157200.e.b
Bonobo	MODERN SPECIES	17	SPATA5 (ENSPPAG00000043407)	NUDT6 (ENSPPAG00000041950)	ENSPPAG00000041837	BBS12 (ENSPPAG00000018104)	IL21 (ENSPPAG00000037554)	IL2 (ENSPPAG00000030452)	ADAD1 (ENSPPAG00000028860)	BLTP1 (ENSPPAG00000043504)	TRPC3 (ENSPPAG00000033334)	BBS7 (ENSPPAG00000029739)	CCNA2 (ENSPPAG00000039546)	EXOSC9 (ENSPPAG00000043865)	ENSPPAG00000038482	ANXA5 (ENSPPAG00000030418) #19	ENSPPAG00000041599	QRFPR (ENSPPAG00000039892) #22	ENSPPAG00000014076	NDNF (ENSPPAG00000019574)	PRDM5 (ENSPPAG00000043045)	ENSPPAG00000043124	MAD2L1 (ENSPPAG00000028274)	ENSPPAG00000016397	PDE5A (ENSPPAG00000041127)	FABP2 (ENSPPAG00000016227)	ENSPPAG00000039685	USP53 (ENSPPAG00000036629)	MYOZ2 (ENSPPAG00000036517)	SYNPO2 (ENSPPAG00000035039)	SEC24D (ENSPPAG00000028599)	METTL14 (ENSPPAG00000029930)	PRSS12 (ENSPPAG00000035391)
Chimpanzee	MODERN SPECIES	17	SPATA5 (ENSPTRG00000016423)	NUDT6 (ENSPTRG00000016422)	FGF2 (ENSPTRG00000051807)	BBS12 (ENSPTRG00000016420)	IL21 (ENSPTRG00000016419)	IL2 (ENSPTRG00000016418)	ADAD1 (ENSPTRG00000016417)	KIAA1109 (ENSPTRG00000016416)	TRPC3 (ENSPTRG00000016412)	BBS7 (ENSPTRG00000016411)	CCNA2 (ENSPTRG00000016410)	EXOSC9 (ENSPTRG00000044568)	TMEM155 (ENSPTRG00000043830)	ANXA5 (ENSPTRG00000016407) #19	ENSPTRG00000049306	QRFPR (ENSPTRG00000016406) #22	TNIP3 (ENSPTRG00000016405)	NDNF (ENSPTRG00000016404)	PRDM5 (ENSPTRG00000016403)	ENSPTRG00000049051	MAD2L1 (ENSPTRG00000016401)	PDE5A (ENSPTRG00000016400)	ENSPTRG00000023546	FABP2 (ENSPTRG00000016399)	C4H4orf3 (ENSPTRG00000016398)	USP53 (ENSPTRG00000016397)	MYOZ2 (ENSPTRG00000016395)	SYNPO2 (ENSPTRG00000016394)	SEC24D (ENSPTRG00000052560)	METTL14 (ENSPTRG00000016391)	PRSS12 (ENSPTRG00000016390)
Human	MODERN SPECIES	16	SPRY1 (ENSG00000164056)	SPATA5 (ENSG00000145375)	NUDT6 (ENSG00000170917)	FGF2 (ENSG00000138685)	BBS12 (ENSG00000181004)	IL21 (ENSG00000138684)	IL2 (ENSG00000109471)	ADAD1 (ENSG00000164113)	BLTP1 (ENSG00000138688)	TRPC3 (ENSG00000138741)	BBS7 (ENSG00000138686)	CCNA2 (ENSG00000145386)	EXOSC9 (ENSG00000123737)	SMIM43 (ENSG00000164112)	ANXA5 (ENSG00000164111) #19	QRFPR (ENSG00000186867) #22	TNIP3 (ENSG00000050730)	NDNF (ENSG00000173376)	PRDM5 (ENSG00000138738)	MAD2L1 (ENSG00000164109)	PDE5A (ENSG00000138735)	FABP2 (ENSG00000145384)	C4orf3 (ENSG00000164096)	USP53 (ENSG00000145390)	MYOZ2 (ENSG00000172399)	SYNPO2 (ENSG00000172403)	SEC24D (ENSG00000150961)	METTL14 (ENSG00000145388)	PRSS12 (ENSG00000164099)	NDST3 (ENSG00000164100)	TRAM1L1 (ENSG00000174599)
Orangutan	MODERN SPECIES	17	SPATA5 (ENSPPYG00000015048)	NUDT6 (ENSPPYG00000015047)	ENSPPYG00000015046	BBS12 (ENSPPYG00000015045)	IL21 (ENSPPYG00000015044)	IL2 (ENSPPYG00000015043)	ADAD1 (ENSPPYG00000015042)	BLTP1 (ENSPPYG00000015041)	TRPC3 (ENSPPYG00000015040)	BBS7 (ENSPPYG00000015039)	CCNA2 (ENSPPYG00000015038)	EXOSC9 (ENSPPYG00000015037)	SMIM43 (ENSPPYG00000015036)	ANXA5 (ENSPPYG00000015035) #19	ENSPPYG00000040499	QRFPR (ENSPPYG00000015034) #22	ENSPPYG00000015033	NDNF (ENSPPYG00000015032)	PRDM5 (ENSPPYG00000015031)	MAD2L1 (ENSPPYG00000015029)	PDE5A (ENSPPYG00000015028)	FABP2 (ENSPPYG00000015027)	C4H4orf3 (ENSPPYG00000034080)	USP53 (ENSPPYG00000015025)	MYOZ2 (ENSPPYG00000015023)	SYNPO2 (ENSPPYG00000015022)	SEC24D (ENSPPYG00000015021)	METTL14 (ENSPPYG00000015020)	PRSS12 (ENSPPYG00000015019)	NDST3 (ENSPPYG00000015018)	TRAM1L1 (ENSPPYG00000015017)
Gibbon	MODERN SPECIES	22	SPATA5 (ENSNLEG00000009470)	ENSNLEG00000031943	NUDT6 (ENSNLEG00000032258)	ENSNLEG00000032378	BBS12 (ENSNLEG00000018253)	IL21 (ENSNLEG00000009448)	IL2 (ENSNLEG00000009439)	ADAD1 (ENSNLEG00000009415)	BLTP1 (ENSNLEG00000009385)	TRPC3 (ENSNLEG00000009366)	BBS7 (ENSNLEG00000009344)	CCNA2 (ENSNLEG00000009333)	EXOSC9 (ENSNLEG00000009300)	ENSNLEG00000009291	ANXA5 (ENSNLEG00000009177) #19	QRFPR (ENSNLEG00000031181) #22	ENSNLEG00000031186	ENSNLEG00000009139	NDNF (ENSNLEG00000029039)	PRDM5 (ENSNLEG00000009107)	ENSNLEG00000030321	ENSNLEG00000034205	ENSNLEG00000009092	PDE5A (ENSNLEG00000009039)	FABP2 (ENSNLEG00000009034)	ENSNLEG00000028084	USP53 (ENSNLEG00000009014)	MYOZ2 (ENSNLEG00000008993)	SYNPO2 (ENSNLEG00000008969)	SEC24D (ENSNLEG00000008903)	METTL14 (ENSNLEG00000008883)
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.sb	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.c	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.sb	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.c	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Vervet Monkey	MODERN SPECIES	26	ENSCSAG00000003645	NUDT6 (ENSCSAG00000003654)	FGF2 (ENSCSAG00000003659)	BBS12 (ENSCSAG00000000394)	IL21 (ENSCSAG00000003662)	IL2 (ENSCSAG00000003667)	ADAD1 (ENSCSAG00000003673)	BLTP1 (ENSCSAG00000003688)	TRPC3 (ENSCSAG00000003692)	BBS7 (ENSCSAG00000003698)	CCNA2 (ENSCSAG00000003701)	EXOSC9 (ENSCSAG00000003705)	ENSCSAG00000003708	ANXA5 (ENSCSAG00000003714) #19	ENSCSAG00000003716	QRFPR (ENSCSAG00000003717) #22	TNIP3 (ENSCSAG00000003720)	NDNF (ENSCSAG00000003726)	PRDM5 (ENSCSAG00000003729)	ENSCSAG00000003731	PDE5A (ENSCSAG00000003739)	FABP2 (ENSCSAG00000003744)	ENSCSAG00000003745	USP53 (ENSCSAG00000003748)	ENSCSAG00000003749	MYOZ2 (ENSCSAG00000003751)	SYNPO2 (ENSCSAG00000003754)	SEC24D (ENSCSAG00000003757)	METTL14 (ENSCSAG00000003762)	PRSS12 (ENSCSAG00000003767)	NDST3 (ENSCSAG00000003772)
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000153395.a.sb	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.c	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.rb.a	ENSGT00940000153395.a.rb.b.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.c	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Olive baboon	MODERN SPECIES	13	BLTP1 (ENSPANG00000025669)	ENSPANG00000042785	TRPC3 (ENSPANG00000006913)	BBS7 (ENSPANG00000005724)	CCNA2 (ENSPANG00000008601)	EXOSC9 (ENSPANG00000000792)	SMIM43 (ENSPANG00000043689)	ENSPANG00000038330	ENSPANG00000045565	ENSPANG00000033569	ENSPANG00000030816	ENSPANG00000042448	ENSPANG00000038953	ANXA5 (ENSPANG00000011025) #19	ENSPANG00000048379	QRFPR (ENSPANG00000039070) #22	TNIP3 (ENSPANG00000008756)	ENSPANG00000038766	NDNF (ENSPANG00000040917)	ENSPANG00000011906	PRDM5 (ENSPANG00000023612)	ENSPANG00000041603	ENSPANG00000049116	ENSPANG00000031623	MAD2L1 (ENSPANG00000019721)	ENSPANG00000044973	ENSPANG00000037217	PDE5A (ENSPANG00000011908)	FABP2 (ENSPANG00000008053)	C4orf3 (ENSPANG00000045313)	USP53 (ENSPANG00000001095)
Cercopithecinae_d	ANCESTRAL SPECIES	62									ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.sb	ENSGT00940000153395.a.rb.b.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.c	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Sooty mangabey	MODERN SPECIES	348							BLTP1 (ENSCATG00000025446)	TRPC3 (ENSCATG00000044900)	BBS7 (ENSCATG00000025713)	CCNA2 (ENSCATG00000029547)	EXOSC9 (ENSCATG00000044273)	ENSCATG00000040714	ENSCATG00000038631	ANXA5 (ENSCATG00000038376) #19	ENSCATG00000031240	QRFPR (ENSCATG00000041017) #22	TNIP3 (ENSCATG00000043498)	NDNF (ENSCATG00000031227)	PRDM5 (ENSCATG00000042510)	ENSCATG00000009459	ENSCATG00000040684	ENSCATG00000039250	ENSCATG00000044697	PDE5A (ENSCATG00000030892)	FABP2 (ENSCATG00000029827)	ENSCATG00000029489	USP53 (ENSCATG00000039375)	MYOZ2 (ENSCATG00000032371)	SYNPO2 (ENSCATG00000024146)	SEC24D (ENSCATG00000038872)	METTL14 (ENSCATG00000040790)
Drill	MODERN SPECIES	1218	SLC38A9 (ENSMLEG00000034584)	PLPP1 (ENSMLEG00000029478)	ENSMLEG00000024622	MTREX (ENSMLEG00000041051)	DHX29 (ENSMLEG00000032837)	CCNO (ENSMLEG00000036886)	MCIDAS (ENSMLEG00000033943)	GPX8 (ENSMLEG00000034464)	CDC20B (ENSMLEG00000038674)	GZMA (ENSMLEG00000040793)	CCNA2 (ENSMLEG00000041387)	EXOSC9 (ENSMLEG00000042316)	ENSMLEG00000036961	ANXA5 (ENSMLEG00000001710) #19	ENSMLEG00000000209	QRFPR (ENSMLEG00000034740) #22	TNIP3 (ENSMLEG00000029119)	NDNF (ENSMLEG00000040140)	PRDM5 (ENSMLEG00000023145)
Macaca	ANCESTRAL SPECIES	18	ENSGT00390000004832.d	ENSGT00390000008458	ENSGT00940000161583	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.sb	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.c	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b	ENSGT01100000263509.a.a.b.a.a.a	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155276.x.a.a.b	ENSGT00940000153395.a.sb	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.a.a	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Rhesus	MODERN SPECIES	15	NUDT6 (ENSMMUG00000007420)	FGF2 (ENSMMUG00000007419)	IL21 (ENSMMUG00000049383)	IL2 (ENSMMUG00000021093)	ADAD1 (ENSMMUG00000004572)	ENSMMUG00000059781	KIAA1109 (ENSMMUG00000004571)	ENSMMUG00000037703	TRPC3 (ENSMMUG00000009820)	ENSMMUG00000062510	BBS7 (ENSMMUG00000009819)	CCNA2 (ENSMMUG00000009817)	EXOSC9 (ENSMMUG00000009816)	TMEM155 (ENSMMUG00000001752)	ANXA5 (ENSMMUG00000009194) #19	QRFPR (ENSMMUG00000050565) #22	TNIP3 (ENSMMUG00000004415)	NDNF (ENSMMUG00000013989)	PRDM5 (ENSMMUG00000003249)	ENSMMUG00000062519	MAD2L1 (ENSMMUG00000054168)	PDE5A (ENSMMUG00000007305)	FABP2 (ENSMMUG00000061216)	USP53 (ENSMMUG00000008705)	ENSMMUG00000054494	MYOZ2 (ENSMMUG00000008703)	SYNPO2 (ENSMMUG00000008702)	SEC24D (ENSMMUG00000007294)	METTL14 (ENSMMUG00000007292)	PRSS12 (ENSMMUG00000015260)	NDST3 (ENSMMUG00000015259)
Crab-eating macaque	MODERN SPECIES	15	IL21 (ENSMFAG00000047192)	IL2 (ENSMFAG00000035827)	ADAD1 (ENSMFAG00000003813)	BLTP1 (ENSMFAG00000030541)	ENSMFAG00000060540	TRPC3 (ENSMFAG00000000600)	ENSMFAG00000016983	BBS7 (ENSMFAG00000042678)	CCNA2 (ENSMFAG00000037740)	EXOSC9 (ENSMFAG00000038292)	ENSMFAG00000039159	ANXA5 (ENSMFAG00000045853) #19	ENSMFAG00000064396	ENSMFAG00000063921	ENSMFAG00000056704	QRFPR (ENSMFAG00000039454) #22	TNIP3 (ENSMFAG00000044869)	NDNF (ENSMFAG00000003473)	ENSMFAG00000065496	PRDM5 (ENSMFAG00000045845)	ENSMFAG00000040479	ENSMFAG00000043866	PDE5A (ENSMFAG00000041058)	FABP2 (ENSMFAG00000038050)	USP53 (ENSMFAG00000045201)	ENSMFAG00000064334	MYOZ2 (ENSMFAG00000000291)	SYNPO2 (ENSMFAG00000037699)	SEC24D (ENSMFAG00000038796)	METTL14 (ENSMFAG00000045633)	PRSS12 (ENSMFAG00000031132)
Pig-tailed macaque	MODERN SPECIES	126	SPATA5 (ENSMNEG00000044789)	ENSMNEG00000012758	NUDT6 (ENSMNEG00000044523)	ENSMNEG00000045396	ENSMNEG00000031358	IL21 (ENSMNEG00000030916)	IL2 (ENSMNEG00000000320)	ADAD1 (ENSMNEG00000032586)	BLTP1 (ENSMNEG00000043520)	TRPC3 (ENSMNEG00000029603)	BBS7 (ENSMNEG00000031834)	CCNA2 (ENSMNEG00000012584)	EXOSC9 (ENSMNEG00000029445)	ENSMNEG00000035605	ANXA5 (ENSMNEG00000035224) #19	QRFPR (ENSMNEG00000041533) #22	TNIP3 (ENSMNEG00000045024)	NDNF (ENSMNEG00000043596)	PRDM5 (ENSMNEG00000019018)	ENSMNEG00000025951	MAD2L1 (ENSMNEG00000040691)	PDE5A (ENSMNEG00000016569)	FABP2 (ENSMNEG00000036803)	ENSMNEG00000030057	USP53 (ENSMNEG00000035179)	MYOZ2 (ENSMNEG00000021579)	SYNPO2 (ENSMNEG00000030337)	SEC24D (ENSMNEG00000035401)	METTL14 (ENSMNEG00000032737)	ENSMNEG00000043767	PRSS12 (ENSMNEG00000043650)
Rhinopithecus	ANCESTRAL SPECIES	286	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22
Golden snub-nosed monkey	MODERN SPECIES	1029								ADAD1 (ENSRROG00000039189)	BLTP1 (ENSRROG00000030311)	TRPC3 (ENSRROG00000039243)	BBS7 (ENSRROG00000013317)	CCNA2 (ENSRROG00000035964)	EXOSC9 (ENSRROG00000040804)	ENSRROG00000042787	ENSRROG00000032027 #19	QRFPR (ENSRROG00000031674) #22
Black snub-nosed monkey	MODERN SPECIES	2108																QRFPR (ENSRBIG00000032759) #22
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842.l	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.rb.a	ENSGT00940000155475	ENSGT00800000124172.c	ENSGT00800000124172.d	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000163819.b
Cebidae	ANCESTRAL SPECIES	4	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842.k	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00910000146657	ENSGT00940000153395.a.rb.b	ENSGT00940000155475	ENSGT00800000124172.c	ENSGT00800000124172.d	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Cebidae_a	ANCESTRAL SPECIES	21	ENSGT00940000155116.b	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842.k	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00910000146657	ENSGT00940000153395.a.rb.b	ENSGT00940000155475	ENSGT00800000124172.c	ENSGT00800000124172.d	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Capuchin	MODERN SPECIES	233						ENSCCAG00000031551	ENSCCAG00000030951	ENSCCAG00000027741	CCSER2 (ENSCCAG00000025424)	TRPC3 (ENSCCAG00000026199)	BBS7 (ENSCCAG00000035113)	CCNA2 (ENSCCAG00000035284)	EXOSC9 (ENSCCAG00000030677)	ENSCCAG00000028108	ANXA5 (ENSCCAG00000032773) #19	QRFPR (ENSCCAG00000027760) #22	TNIP3 (ENSCCAG00000026099)	NDNF (ENSCCAG00000021301)	PRDM5 (ENSCCAG00000023157)	ENSCCAG00000037214	MAD2L1 (ENSCCAG00000030445)	PDE5A (ENSCCAG00000036352)	ENSCCAG00000012470	ENSCCAG00000030693	ENSCCAG00000037219	ENSCCAG00000038103	USP53 (ENSCCAG00000032146)	MYOZ2 (ENSCCAG00000020503)	SYNPO2 (ENSCCAG00000034953)
Bolivian squirrel monkey	MODERN SPECIES	124	ANKRD50 (ENSSBOG00000023636)	SPRY1 (ENSSBOG00000019309)	SPATA5 (ENSSBOG00000026689)	NUDT6 (ENSSBOG00000033311)	FGF2 (ENSSBOG00000030614)	IL21 (ENSSBOG00000030721)	IL2 (ENSSBOG00000025464)	ADAD1 (ENSSBOG00000027476)	BLTP1 (ENSSBOG00000027364)	TRPC3 (ENSSBOG00000035978)	BBS7 (ENSSBOG00000035432)	CCNA2 (ENSSBOG00000032488)	EXOSC9 (ENSSBOG00000020744)	ENSSBOG00000024682	ANXA5 (ENSSBOG00000027347) #19	QRFPR (ENSSBOG00000023041) #22	TNIP3 (ENSSBOG00000020348)	NDNF (ENSSBOG00000026987)	PRDM5 (ENSSBOG00000022100)	ENSSBOG00000029028	ENSSBOG00000028776	C1QTNF3 (ENSSBOG00000023840)	AMACR (ENSSBOG00000022442)	SLC45A2 (ENSSBOG00000028257)	ADAMTS12 (ENSSBOG00000030909)	TARS1 (ENSSBOG00000021854)	NPR3 (ENSSBOG00000025013)	SUB1 (ENSSBOG00000026994)	ZFR (ENSSBOG00000024150)	MTMR12 (ENSSBOG00000000280)	GOLPH3 (ENSSBOG00000027748)
Marmoset	MODERN SPECIES	15	ENSCJAG00000070589	ENSCJAG00000081404	NUDT6 (ENSCJAG00000002741)	ENSCJAG00000002744	BBS12 (ENSCJAG00000002751)	IL21 (ENSCJAG00000002755)	IL2 (ENSCJAG00000041260)	ADAD1 (ENSCJAG00000002796)	BLTP1 (ENSCJAG00000002804)	TRPC3 (ENSCJAG00000002975)	BBS7 (ENSCJAG00000003015)	CCNA2 (ENSCJAG00000003023)	EXOSC9 (ENSCJAG00000003038)	ENSCJAG00000043047	ANXA5 (ENSCJAG00000003072) #19	QRFPR (ENSCJAG00000003105) #22	TNIP3 (ENSCJAG00000003110)	NDNF (ENSCJAG00000003128)	PRDM5 (ENSCJAG00000003133)	ENSCJAG00000064341	MAD2L1 (ENSCJAG00000003156)	ENSCJAG00000068921	PDE5A (ENSCJAG00000003176)	ENSCJAG00000081825	FABP2 (ENSCJAG00000003228)	ENSCJAG00000045160	USP53 (ENSCJAG00000003234)	MYOZ2 (ENSCJAG00000048574)	SYNPO2 (ENSCJAG00000003271)	SEC24D (ENSCJAG00000003283)	METTL14 (ENSCJAG00000003361)
Mas night monkey	MODERN SPECIES	1054	SPRY1 (ENSANAG00000019703)	SPATA5 (ENSANAG00000024588)	NUDT6 (ENSANAG00000014690)	FGF2 (ENSANAG00000037733)	IL21 (ENSANAG00000033883)	IL2 (ENSANAG00000026729)	ENSANAG00000034045	BLTP1 (ENSANAG00000034336)	TRPC3 (ENSANAG00000032754)	BBS7 (ENSANAG00000037930)	ENSANAG00000029372	EXOSC9 (ENSANAG00000024817)	ENSANAG00000027799	ANXA5 (ENSANAG00000019060) #19	ENSANAG00000037751	QRFPR (ENSANAG00000036183) #22	TNIP3 (ENSANAG00000021165)	NDNF (ENSANAG00000021660)	PRDM5 (ENSANAG00000027411)	MAD2L1 (ENSANAG00000022503)	PDE5A (ENSANAG00000036136)	ENSANAG00000036422	ENSANAG00000003057	C4orf3 (ENSANAG00000034334)	USP53 (ENSANAG00000037495)	MYOZ2 (ENSANAG00000035756)	SYNPO2 (ENSANAG00000022499)	SEC24D (ENSANAG00000028409)	METTL14 (ENSANAG00000024273)	PRSS12 (ENSANAG00000024981)	ENSANAG00000035951
Tarsier	MODERN SPECIES	6938																QRFPR (ENSTSYG00000010286) #22	TNIP3 (ENSTSYG00000001887)	NDNF (ENSTSYG00000007097)	ENSTSYG00000010030	PRDM5 (ENSTSYG00000009630)
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT01070000253744.a.b #22
Bushbaby	MODERN SPECIES	279																QRFPR (ENSOGAG00000000471) #22	ENSOGAG00000028056	TNIP3 (ENSOGAG00000001552)	NDNF (ENSOGAG00000001551)	PRDM5 (ENSOGAG00000009996)	ENSOGAG00000004054	PDE5A (ENSOGAG00000015526)	FABP2 (ENSOGAG00000001217)	USP53 (ENSOGAG00000015516)	MYOZ2 (ENSOGAG00000015513)	SYNPO2 (ENSOGAG00000000650)	SEC24D (ENSOGAG00000000648)	METTL14 (ENSOGAG00000000646)	PRSS12 (ENSOGAG00000016906)	NDST3 (ENSOGAG00000016904)	ENSOGAG00000031271
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000154633	ENSGT00940000156916	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01070000253744.a.b #22
Hedgehog	MODERN SPECIES	7837																QRFPR (ENSEEUG00000008540) #22
Common shrew	MODERN SPECIES	6155																QRFPR (ENSSARG00000008877) #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Suina	ANCESTRAL SPECIES	22	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Chacoan peccary	MODERN SPECIES	119	SPATA5 (ENSCWAG00000019195)	NUDT6 (ENSCWAG00000019160)	FGF2 (ENSCWAG00000019141)	BBS12 (ENSCWAG00000019133)	ENSCWAG00000019119	IL21 (ENSCWAG00000019092)	IL2 (ENSCWAG00000019071)	ADAD1 (ENSCWAG00000018954)	BLTP1 (ENSCWAG00000018880)	TRPC3 (ENSCWAG00000018691)	BBS7 (ENSCWAG00000018624)	CCNA2 (ENSCWAG00000018594)	EXOSC9 (ENSCWAG00000018512)	SMIM43 (ENSCWAG00000018501)	ANXA5 (ENSCWAG00000018407) #19	QRFPR (ENSCWAG00000018344) #22	TNIP3 (ENSCWAG00000018124)	NDNF (ENSCWAG00000018086)	PRDM5 (ENSCWAG00000017918)	MAD2L1 (ENSCWAG00000017871)	ENSCWAG00000017822	ENSCWAG00000017799	PDE5A (ENSCWAG00000017523)	ENSCWAG00000017457	FABP2 (ENSCWAG00000017424)	C4orf3 (ENSCWAG00000017402)	USP53 (ENSCWAG00000017367)	MYOZ2 (ENSCWAG00000017316)	SYNPO2 (ENSCWAG00000017183)	SEC24D (ENSCWAG00000017115)	METTL14 (ENSCWAG00000017035)
Pig	MODERN SPECIES	16	SPATA5 (ENSSSCG00000009084)	NUDT6 (ENSSSCG00000009085)	FGF2 (ENSSSCG00000036213)	BBS12 (ENSSSCG00000026290)	ENSSSCG00000034743	IL21 (ENSSSCG00000009087)	IL2 (ENSSSCG00000033267)	ADAD1 (ENSSSCG00000009089)	BLTP1 (ENSSSCG00000009090)	TRPC3 (ENSSSCG00000009092)	BBS7 (ENSSSCG00000009093)	CCNA2 (ENSSSCG00000060144)	EXOSC9 (ENSSSCG00000009096)	SMIM43 (ENSSSCG00000044775)	ANXA5 (ENSSSCG00000009097) #19	QRFPR (ENSSSCG00000009098) #22	ENSSSCG00000056121	TNIP3 (ENSSSCG00000009100)	NDNF (ENSSSCG00000029260)	PRDM5 (ENSSSCG00000009101)	ENSSSCG00000044436	ENSSSCG00000009102	MAD2L1 (ENSSSCG00000036256)	ENSSSCG00000009105	ENSSSCG00000053153	PDE5A (ENSSSCG00000009106)	ENSSSCG00000053989	FABP2 (ENSSSCG00000037272)	C4orf3 (ENSSSCG00000031773)	USP53 (ENSSSCG00000023174)	MYOZ2 (ENSSSCG00000052601)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Pecora	ANCESTRAL SPECIES	15			ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Percora_a	ANCESTRAL SPECIES	18			ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Bovidae	ANCESTRAL SPECIES	18			ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Caprinae	ANCESTRAL SPECIES	13			ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685.d	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570.m	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000164540	ENSGT00940000158131
Goat	MODERN SPECIES	25		ENSCHIG00000024529	ENSCHIG00000016477	ENSCHIG00000013370	ENSCHIG00000023590	TMA16 (ENSCHIG00000014354)	TKTL2 (ENSCHIG00000014778)	NPY5R (ENSCHIG00000026205)	NPY1R (ENSCHIG00000012293)	NAF1 (ENSCHIG00000018430)	BBS7 (ENSCHIG00000021804)	CCNA2 (ENSCHIG00000017736)	EXOSC9 (ENSCHIG00000018091)	ANXA5 (ENSCHIG00000021759) #19	ENSCHIG00000015856	QRFPR (ENSCHIG00000026596) #22	TNIP3 (ENSCHIG00000014328)	NDNF (ENSCHIG00000017486)	PRDM5 (ENSCHIG00000018772)	MAD2L1 (ENSCHIG00000025057)	ENSCHIG00000013097	PDE5A (ENSCHIG00000023222)	FABP2 (ENSCHIG00000022035)	ENSCHIG00000001816	USP53 (ENSCHIG00000013642)	MYOZ2 (ENSCHIG00000012778)	SYNPO2 (ENSCHIG00000022266)	SEC24D (ENSCHIG00000025536)	METTL14 (ENSCHIG00000024680)	ENSCHIG00000019854	PRSS12 (ENSCHIG00000010763)
Rambouillet Sheep	MODERN SPECIES	22	ENSOARG00020021727	ENSOARG00020021754	ENSOARG00020021780	TMA16 (ENSOARG00020021969)	TKTL2 (ENSOARG00020022023)	NPY5R (ENSOARG00020022048)	ENSOARG00020022062	NPY1R (ENSOARG00020022088)	NAF1 (ENSOARG00020022192)	BBS7 (ENSOARG00020022348)	CCNA2 (ENSOARG00020022697)	EXOSC9 (ENSOARG00020022752)	SMIM43 (ENSOARG00020022984)	ENSOARG00020022998	ENSOARG00020023043 #19	QRFPR (ENSOARG00020023156) #22	NDNF (ENSOARG00020023214)	PRDM5 (ENSOARG00020009876)	ENSOARG00020010290	ENSOARG00020010353	MAD2L1 (ENSOARG00020010433)	ENSOARG00020010607	ENSOARG00020010653	ENSOARG00020010708	PDE5A (ENSOARG00020010829)	FABP2 (ENSOARG00020011627)	C6H4orf3 (ENSOARG00020011681)	MYOZ2 (ENSOARG00020011801)	SYNPO2 (ENSOARG00020011882)	SEC24D (ENSOARG00020012239)	METTL14 (ENSOARG00020012676)
Bovinae	ANCESTRAL SPECIES	15			ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Bos	ANCESTRAL SPECIES	15			ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.hb.a	ENSGT00940000163685.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Bos_a	ANCESTRAL SPECIES	33		ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988.k #19	ENSGT01010000222815	ENSGT00940000155988.l #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000155475	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT01100000263506.a.e.a.a.b.b.c.b	ENSGT00940000180978.b	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168
Domestic yak	MODERN SPECIES	25	ENSBGRG00000005607	ENSBGRG00000005590	ENSBGRG00000005585	MARCHF1 (ENSBGRG00000005488)	TMA16 (ENSBGRG00000005375)	TKTL2 (ENSBGRG00000005351)	NPY5R (ENSBGRG00000005333)	NPY1R (ENSBGRG00000005303)	NAF1 (ENSBGRG00000007068)	BBS7 (ENSBGRG00000006822)	CCNA2 (ENSBGRG00000006747)	EXOSC9 (ENSBGRG00000006587)	SMIM43 (ENSBGRG00000006568)	ENSBGRG00000006272 #19	ENSBGRG00000006249	QRFPR (ENSBGRG00000006193) #22	TNIP3 (ENSBGRG00000005802)	NDNF (ENSBGRG00000005750)	PRDM5 (ENSBGRG00000005459)	ENSBGRG00000005429	PDE5A (ENSBGRG00000005023)	ENSBGRG00000004956	ENSBGRG00000004933	USP53 (ENSBGRG00000004871)	MYOZ2 (ENSBGRG00000004836)	SYNPO2 (ENSBGRG00000004790)	SEC24D (ENSBGRG00000004688)	METTL14 (ENSBGRG00000004579)	PRSS12 (ENSBGRG00000004493)	ENSBGRG00000004478	NDST3 (ENSBGRG00000004409)
Wild yak	MODERN SPECIES	896																QRFPR (ENSBMUG00000020468) #22	TNIP3 (ENSBMUG00000020496)	NDNF (ENSBMUG00000020512)	PRDM5 (ENSBMUG00000020520)
Bos_b	ANCESTRAL SPECIES	14				ENSGT01100000263802	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346	ENSGT00940000155372.g	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.hb.a	ENSGT00940000163685.a	ENSGT00940000155475	ENSGT00800000124172.g	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Cow	MODERN SPECIES	25			ENSBTAG00000048001	APELA (ENSBTAG00000053871)	ENSBTAG00000032764	MARCHF1 (ENSBTAG00000044082)	TMA16 (ENSBTAG00000012658)	TKTL2 (ENSBTAG00000008947)	NPY5R (ENSBTAG00000038421)	NPY1R (ENSBTAG00000047586)	NAF1 (ENSBTAG00000034700)	BBS7 (ENSBTAG00000004945)	CCNA2 (ENSBTAG00000004943)	EXOSC9 (ENSBTAG00000004942)	ANXA5 (ENSBTAG00000021746) #19	QRFPR (ENSBTAG00000008255) #22	NDNF (ENSBTAG00000010634)	PRDM5 (ENSBTAG00000012111)	PDE5A (ENSBTAG00000024888)	FABP2 (ENSBTAG00000017045)	C6H4orf3 (ENSBTAG00000048273)	USP53 (ENSBTAG00000010350)	MYOZ2 (ENSBTAG00000002574)	SYNPO2 (ENSBTAG00000006434)	SEC24D (ENSBTAG00000003619)	METTL14 (ENSBTAG00000014080)	PRSS12 (ENSBTAG00000020705)	NDST3 (ENSBTAG00000007316)	ENSBTAG00000034844	ENSBTAG00000034849	ENSBTAG00000052120
Hybrid Bos Indicus	MODERN SPECIES	25	ENSBIXG00005030075	ENSBIXG00005005235	ENSBIXG00005001717	ENSBIXG00005029169	MARCHF1 (ENSBIXG00005001795)	TMA16 (ENSBIXG00005029141)	TKTL2 (ENSBIXG00005001863)	NPY5R (ENSBIXG00005005169)	NPY1R (ENSBIXG00005005160)	NAF1 (ENSBIXG00005029085)	BBS7 (ENSBIXG00005029038)	ENSBIXG00005028983	EXOSC9 (ENSBIXG00005028975)	SMIM43 (ENSBIXG00005005080)	ANXA5 (ENSBIXG00005005069) #19	QRFPR (ENSBIXG00005028780) #22	TNIP3 (ENSBIXG00005028738)	NDNF (ENSBIXG00005002378)	PRDM5 (ENSBIXG00005028611)	ENSBIXG00005028491	ENSBIXG00005006635	ENSBIXG00005028397	PDE5A (ENSBIXG00005028330)	ENSBIXG00005028196	C4orf3 (ENSBIXG00005028168)	USP53 (ENSBIXG00005006630)	MYOZ2 (ENSBIXG00005027989)	SYNPO2 (ENSBIXG00005027954)	ENSBIXG00005027911	SEC24D (ENSBIXG00005027886)	METTL14 (ENSBIXG00005006536)
American bison	MODERN SPECIES	3299				ENSBBBG00000007492	TMA16 (ENSBBBG00000003389)	TKTL2 (ENSBBBG00000003390)	NPY5R (ENSBBBG00000014527)	NPY1R (ENSBBBG00000003398)	ENSBBBG00000014533	BBS7 (ENSBBBG00000007128)	CCNA2 (ENSBBBG00000002866)	EXOSC9 (ENSBBBG00000014573)	SMIM43 (ENSBBBG00000008152)	ANXA5 (ENSBBBG00000003556) #19	ENSBBBG00000014678	QRFPR (ENSBBBG00000014690) #22	TNIP3 (ENSBBBG00000014735)	NDNF (ENSBBBG00000014746)	PRDM5 (ENSBBBG00000014823)
Siberian musk deer	MODERN SPECIES	1271			ENSMMSG00000018599	MARCHF1 (ENSMMSG00000018482)	TMA16 (ENSMMSG00000018436)	TKTL2 (ENSMMSG00000018406)	NPY5R (ENSMMSG00000018382)	NPY1R (ENSMMSG00000018359)	ENSMMSG00000018339	BBS7 (ENSMMSG00000018260)	CCNA2 (ENSMMSG00000018221)	EXOSC9 (ENSMMSG00000018147)	SMIM43 (ENSMMSG00000018134)	ENSMMSG00000018019	ANXA5 (ENSMMSG00000017820) #19	QRFPR (ENSMMSG00000017721) #22	TNIP3 (ENSMMSG00000017595)	NDNF (ENSMMSG00000017569)	ENSMMSG00000017498	MAD2L1 (ENSMMSG00000017450)	ENSMMSG00000017396	PDE5A (ENSMMSG00000017279)	FABP2 (ENSMMSG00000017233)	ENSMMSG00000017213	USP53 (ENSMMSG00000017172)	MYOZ2 (ENSMMSG00000017140)	SYNPO2 (ENSMMSG00000017112)	SEC24D (ENSMMSG00000024289)	METTL14 (ENSMMSG00000024284)	PRSS12 (ENSMMSG00000024282)	NDST3 (ENSMMSG00000024279)
Yarkand deer	MODERN SPECIES	8			ENSCHYG00000015507	SMIM31 (ENSCHYG00000015554)	MARCHF1 (ENSCHYG00000015629)	TMA16 (ENSCHYG00000015932)	TKTL2 (ENSCHYG00000016177)	NPY5R (ENSCHYG00000016193)	NPY1R (ENSCHYG00000016224)	NAF1 (ENSCHYG00000016276)	BBS7 (ENSCHYG00000016446)	CCNA2 (ENSCHYG00000016601)	ENSCHYG00000016813	ENSCHYG00000016979	ENSCHYG00000017051 #19	QRFPR (ENSCHYG00000017586) #22	TNIP3 (ENSCHYG00000017670)	NDNF (ENSCHYG00000017920)	PRDM5 (ENSCHYG00000018062)	ENSCHYG00000018636	ENSCHYG00000018659	PDE5A (ENSCHYG00000018720)	FABP2 (ENSCHYG00000019259)	ENSCHYG00000019324	C4orf3 (ENSCHYG00000019350)	USP53 (ENSCHYG00000019385)	MYOZ2 (ENSCHYG00000019531)	SYNPO2 (ENSCHYG00000019608)	SEC24D (ENSCHYG00000019930)	METTL14 (ENSCHYG00000020653)	ENSCHYG00000020777
Camelidae	ANCESTRAL SPECIES	20	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Arabian camel	MODERN SPECIES	11	ENSCDRG00005002842	IL21 (ENSCDRG00005002864)	IL2 (ENSCDRG00005002894)	ADAD1 (ENSCDRG00005002907)	BLTP1 (ENSCDRG00005002954)	TRPC3 (ENSCDRG00005003132)	BBS7 (ENSCDRG00005003165)	CCNA2 (ENSCDRG00005003183)	EXOSC9 (ENSCDRG00005003201)	SMIM43 (ENSCDRG00005003220)	ENSCDRG00005003231	ANXA5 (ENSCDRG00005003256) #19	ENSCDRG00005003320	ENSCDRG00005003330	ENSCDRG00005003346	QRFPR (ENSCDRG00005003358) #22	TNIP3 (ENSCDRG00005003398)	NDNF (ENSCDRG00005003482)	PRDM5 (ENSCDRG00005003544)	MAD2L1 (ENSCDRG00005003818)	PDE5A (ENSCDRG00005003851)	FABP2 (ENSCDRG00005003970)	ENSCDRG00005004009	USP53 (ENSCDRG00005004038)	MYOZ2 (ENSCDRG00005004113)	SYNPO2 (ENSCDRG00005004165)	SEC24D (ENSCDRG00005004247)	METTL14 (ENSCDRG00005004354)	PRSS12 (ENSCDRG00005004405)	NDST3 (ENSCDRG00005004436)	TRAM1L1 (ENSCDRG00005004454)
Alpaca	MODERN SPECIES	711																QRFPR (ENSVPAG00000007440) #22	TNIP3 (ENSVPAG00000007439)	NDNF (ENSVPAG00000007437)	PRDM5 (ENSVPAG00000007435)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Ursidae	ANCESTRAL SPECIES	17	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988.p #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Ursus	ANCESTRAL SPECIES	74	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988.p #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475.c	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Polar bear	MODERN SPECIES	159	SPRY1 (ENSUMAG00000004634)	SPATA5 (ENSUMAG00000004627)	NUDT6 (ENSUMAG00000004613)	FGF2 (ENSUMAG00000004611)	BBS12 (ENSUMAG00000004608)	ENSUMAG00000004604	IL21 (ENSUMAG00000004579)	IL2 (ENSUMAG00000004523)	ADAD1 (ENSUMAG00000004507)	BLTP1 (ENSUMAG00000004087)	TRPC3 (ENSUMAG00000004005)	BBS7 (ENSUMAG00000003887)	CCNA2 (ENSUMAG00000003859)	EXOSC9 (ENSUMAG00000003848)	ANXA5 (ENSUMAG00000003835) #19	QRFPR (ENSUMAG00000003803) #22	TNIP3 (ENSUMAG00000003798)	NDNF (ENSUMAG00000003788)	PRDM5 (ENSUMAG00000003733)	MAD2L1 (ENSUMAG00000003710)	ENSUMAG00000003706	PDE5A (ENSUMAG00000003696)	FABP2 (ENSUMAG00000003687)	C4orf3 (ENSUMAG00000003683)	USP53 (ENSUMAG00000003650)	MYOZ2 (ENSUMAG00000003636)	SYNPO2 (ENSUMAG00000003620)	SEC24D (ENSUMAG00000003603)	METTL14 (ENSUMAG00000003593)	PRSS12 (ENSUMAG00000003572)	NDST3 (ENSUMAG00000003516)
American black bear	MODERN SPECIES	2940																QRFPR (ENSUAMG00000004311) #22	ENSUAMG00000004313
Giant Panda	MODERN SPECIES	15	SPRY1 (ENSAMEG00000020222)	SPATA5 (ENSAMEG00000017512)	NUDT6 (ENSAMEG00000017507)	FGF2 (ENSAMEG00000017506)	BBS12 (ENSAMEG00000019141)	ENSAMEG00000005873	IL21 (ENSAMEG00000005893)	IL2 (ENSAMEG00000005901)	ADAD1 (ENSAMEG00000005920)	BLTP1 (ENSAMEG00000005935)	TRPC3 (ENSAMEG00000006036)	BBS7 (ENSAMEG00000006076)	CCNA2 (ENSAMEG00000006109)	EXOSC9 (ENSAMEG00000006133)	ANXA5 (ENSAMEG00000004986) #19	QRFPR (ENSAMEG00000003088) #22	TNIP3 (ENSAMEG00000003076)	NDNF (ENSAMEG00000003069)	ENSAMEG00000003050
Mustelinae	ANCESTRAL SPECIES	113	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
American mink	MODERN SPECIES	144	SPATA5 (ENSNVIG00000014363)	NUDT6 (ENSNVIG00000014336)	ENSNVIG00000014326	FGF2 (ENSNVIG00000014318)	BBS12 (ENSNVIG00000014313)	ENSNVIG00000014308	IL21 (ENSNVIG00000014270)	IL2 (ENSNVIG00000014254)	ADAD1 (ENSNVIG00000014224)	BLTP1 (ENSNVIG00000013453)	TRPC3 (ENSNVIG00000013343)	BBS7 (ENSNVIG00000013306)	CCNA2 (ENSNVIG00000013266)	EXOSC9 (ENSNVIG00000013232)	ANXA5 (ENSNVIG00000013148) #19	QRFPR (ENSNVIG00000013132) #22	TNIP3 (ENSNVIG00000013062)	NDNF (ENSNVIG00000013039)	PRDM5 (ENSNVIG00000012926)	MD2L1 (ENSNVIG00000012901)	ENSNVIG00000012892	PDE5A (ENSNVIG00000012783)	FABPI (ENSNVIG00000012755)	C4orf3 (ENSNVIG00000012753)	USP53 (ENSNVIG00000012706)	MYOZ2 (ENSNVIG00000012700)	SYNPO2 (ENSNVIG00000012675)	SEC24D (ENSNVIG00000012626)	MTL14 (ENSNVIG00000012591)	PRSS12 (ENSNVIG00000012567)	NDST3 (ENSNVIG00000012542)
Ferret	MODERN SPECIES	183	NUDT6 (ENSMPUG00000017386)	FGF2 (ENSMPUG00000017387)	BBS12 (ENSMPUG00000018971)	ENSMPUG00000017388	ENSMPUG00000018974	IL21 (ENSMPUG00000017391)	IL2 (ENSMPUG00000017393)	ADAD1 (ENSMPUG00000017394)	BLTP1 (ENSMPUG00000017395)	ENSMPUG00000017399	TRPC3 (ENSMPUG00000017402)	BBS7 (ENSMPUG00000017404)	CCNA2 (ENSMPUG00000017407)	EXOSC9 (ENSMPUG00000017410)	ANXA5 (ENSMPUG00000017411) #19	QRFPR (ENSMPUG00000017412) #22	TNIP3 (ENSMPUG00000017413)	NDNF (ENSMPUG00000017414)	PRDM5 (ENSMPUG00000017415)	MAD2L1 (ENSMPUG00000017416)	ENSMPUG00000017417	PDE5A (ENSMPUG00000017420)	FABP2 (ENSMPUG00000017421)	USP53 (ENSMPUG00000017422)	MYOZ2 (ENSMPUG00000017430)	SYNPO2 (ENSMPUG00000017431)	SEC24D (ENSMPUG00000017433)	METTL14 (ENSMPUG00000017434)	PRSS12 (ENSMPUG00000017435)	NDST3 (ENSMPUG00000017437)
Canidae	ANCESTRAL SPECIES	61	ENSGT00940000157323	ENSGT00390000008458.e	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340
Canis_lupus	ANCESTRAL SPECIES	48	ENSGT00940000157323	ENSGT00390000008458.e	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163685.e	ENSGT00940000153395.a	ENSGT00940000163685.f.a	ENSGT01050000244818.t.c.a.b.a.b.a.a
Dog	MODERN SPECIES	10	SPRY1 (ENSCAFG00845019042)	ENSCAFG00845019163	ENSCAFG00845019786	BBS12 (ENSCAFG00845020036)	ENSCAFG00845020056	IL21 (ENSCAFG00845020106)	IL2 (ENSCAFG00845020168)	ADAD1 (ENSCAFG00845020228)	BLTP1 (ENSCAFG00845020357)	TRPC3 (ENSCAFG00845020742)	BBS7 (ENSCAFG00845021025)	CCNA2 (ENSCAFG00845021203)	EXOSC9 (ENSCAFG00845021268)	SMIM43 (ENSCAFG00845021369)	ANXA5 (ENSCAFG00845021481) #19	QRFPR (ENSCAFG00845021749) #22	TNIP3 (ENSCAFG00845021891)	NDNF (ENSCAFG00845022460)	ENSCAFG00845022502	ENSCAFG00845022584	ENSCAFG00845022931	ENSCAFG00845023060	ENSCAFG00845023145	ENSCAFG00845023433	ENSCAFG00845023475	ENSCAFG00845017422	ENSCAFG00845017495	ENSCAFG00845017558	ENSCAFG00845017593	ENSCAFG00845017670	ENSCAFG00845017745
Dingo	MODERN SPECIES	28	SPATA5 (ENSCAFG00020018331)	NUDT6 (ENSCAFG00020018327)	FGF2 (ENSCAFG00020018322)	BBS12 (ENSCAFG00020018319)	ENSCAFG00020018316	IL21 (ENSCAFG00020018312)	IL2 (ENSCAFG00020018289)	ADAD1 (ENSCAFG00020018271)	BLTP1 (ENSCAFG00020018234)	TRPC3 (ENSCAFG00020017728)	BBS7 (ENSCAFG00020017716)	CCNA2 (ENSCAFG00020017712)	EXOSC9 (ENSCAFG00020017711)	ANXA5 (ENSCAFG00020017709) #19	ENSCAFG00020017708	QRFPR (ENSCAFG00020017699) #22	ENSCAFG00020017696	NDNF (ENSCAFG00020017691)	PRDM5 (ENSCAFG00020017685)	ENSCAFG00020017680
Red fox	MODERN SPECIES	129	FGF2 (ENSVVUG00000013637)	BBS12 (ENSVVUG00000013634)	ENSVVUG00000013632	IL21 (ENSVVUG00000013615)	IL2 (ENSVVUG00000013605)	ADAD1 (ENSVVUG00000013576)	ENSVVUG00000013492	ENSVVUG00000013429	ENSVVUG00000013376	TRPC3 (ENSVVUG00000013359)	BBS7 (ENSVVUG00000013344)	CCNA2 (ENSVVUG00000013326)	EXOSC9 (ENSVVUG00000013324)	ENSVVUG00000013321	ANXA5 (ENSVVUG00000013320) #19	QRFPR (ENSVVUG00000013287) #22	TNIP3 (ENSVVUG00000013240)	NDNF (ENSVVUG00000013226)	ENSVVUG00000013218	PRDM5 (ENSVVUG00000013192)
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A.t	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A.t	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A.t	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
lion	MODERN SPECIES	4	SPATA5 (ENSPLOG00000010465)	NUDT6 (ENSPLOG00000010559)	FGF2 (ENSPLOG00000010598)	BBS12 (ENSPLOG00000010633)	ENSPLOG00000010652	IL21 (ENSPLOG00000010718)	IL2 (ENSPLOG00000010807)	ADAD1 (ENSPLOG00000010854)	BLTP1 (ENSPLOG00000011100)	TRPC3 (ENSPLOG00000011770)	BBS7 (ENSPLOG00000012081)	CCNA2 (ENSPLOG00000012375)	EXOSC9 (ENSPLOG00000012469)	SMIM43 (ENSPLOG00000012607)	ANXA5 (ENSPLOG00000012713) #19	QRFPR (ENSPLOG00000012873) #22	TNIP3 (ENSPLOG00000012998)	NDNF (ENSPLOG00000013303)	PRDM5 (ENSPLOG00000013388)	MAD2L1 (ENSPLOG00000013801)	ENSPLOG00000013948	PDE5A (ENSPLOG00000014134)	FABP2 (ENSPLOG00000014469)	C4orf3 (ENSPLOG00000014512)	USP53 (ENSPLOG00000014535)	MYOZ2 (ENSPLOG00000014603)	SYNPO2 (ENSPLOG00000014681)	SEC24D (ENSPLOG00000014842)	METTL14 (ENSPLOG00000014973)	PRSS12 (ENSPLOG00000015046)	NDST3 (ENSPLOG00000015257)
leopard	MODERN SPECIES	3	SPRY1 (ENSPPRG00000019602)	SPATA5 (ENSPPRG00000005683)	NUDT6 (ENSPPRG00000006152)	FGF2 (ENSPPRG00000006805)	ENSPPRG00000019692	ENSPPRG00000007365	IL21 (ENSPPRG00000007690)	IL2 (ENSPPRG00000008206)	ADAD1 (ENSPPRG00000008821)	BLTP1 (ENSPPRG00000010448)	TRPC3 (ENSPPRG00000012337)	BBS7 (ENSPPRG00000013153)	CCNA2 (ENSPPRG00000013431)	ENSPPRG00000014689	ANXA5 (ENSPPRG00000019765) #19	QRFPR (ENSPPRG00000021780) #22	TNIP3 (ENSPPRG00000023814)	NDNF (ENSPPRG00000023532)	PRDM5 (ENSPPRG00000001020)	MAD2L1 (ENSPPRG00000001274)	ENSPPRG00000001481	PDE5A (ENSPPRG00000002118)	FABP2 (ENSPPRG00000002199)	C4orf3 (ENSPPRG00000002293)	USP53 (ENSPPRG00000002944)	MYOZ2 (ENSPPRG00000003221)	ENSPPRG00000009110	SYNPO2 (ENSPPRG00000010649)	SEC24D (ENSPPRG00000013417)	METTL14 (ENSPPRG00000013792)	PRSS12 (ENSPPRG00000014259)
Tiger	MODERN SPECIES	267	ANKRD50 (ENSPTIG00000007405)	SPRY1 (ENSPTIG00000009827)	SPATA5 (ENSPTIG00000007655)	NUDT6 (ENSPTIG00000007701)	FGF2 (ENSPTIG00000007794)	ENSPTIG00000007833	IL21 (ENSPTIG00000007853)	IL2 (ENSPTIG00000008068)	ADAD1 (ENSPTIG00000008158)	BLTP1 (ENSPTIG00000008209)	TRPC3 (ENSPTIG00000009322)	BBS7 (ENSPTIG00000009502)	CCNA2 (ENSPTIG00000009997)	EXOSC9 (ENSPTIG00000010017)	ANXA5 (ENSPTIG00000010178) #19	QRFPR (ENSPTIG00000010292) #22	TNIP3 (ENSPTIG00000010424)	NDNF (ENSPTIG00000010665)	PRDM5 (ENSPTIG00000010807)	MAD2L1 (ENSPTIG00000011046)	ENSPTIG00000011110	PDE5A (ENSPTIG00000011392)	FABP2 (ENSPTIG00000011486)	C4orf3 (ENSPTIG00000011587)	USP53 (ENSPTIG00000011597)	MYOZ2 (ENSPTIG00000011762)	SYNPO2 (ENSPTIG00000011832)	SEC24D (ENSPTIG00000012156)	METTL14 (ENSPTIG00000012504)	PRSS12 (ENSPTIG00000012530)	NDST3 (ENSPTIG00000012612)
Cat	MODERN SPECIES	235	ANKRD50 (ENSFCAG00000022321)	SPRY1 (ENSFCAG00000013543)	SPATA5 (ENSFCAG00000013539)	NUDT6 (ENSFCAG00000036723)	CETN4 (ENSFCAG00000030782)	IL21 (ENSFCAG00000006101)	IL2 (ENSFCAG00000013688)	ADAD1 (ENSFCAG00000019180)	KIAA1109 (ENSFCAG00000028832)	TRPC3 (ENSFCAG00000002559)	BBS7 (ENSFCAG00000026950)	CCNA2 (ENSFCAG00000023290)	EXOSC9 (ENSFCAG00000025246)	ENSFCAG00000049395	ANXA5 (ENSFCAG00000004439) #19	QRFPR (ENSFCAG00000029517) #22	TNIP3 (ENSFCAG00000011004)	NDNF (ENSFCAG00000011003)	PRDM5 (ENSFCAG00000025656)	ENSFCAG00000029540	MAD2L1 (ENSFCAG00000027818)	ENSFCAG00000030366	PDE5A (ENSFCAG00000010364)	FABP2 (ENSFCAG00000026257)	CB1H4orf3 (ENSFCAG00000043946)	USP53 (ENSFCAG00000014472)	MYOZ2 (ENSFCAG00000003007)	SYNPO2 (ENSFCAG00000028738)	SEC24D (ENSFCAG00000007069)	METTL14 (ENSFCAG00000007068)	PRSS12 (ENSFCAG00000005100)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Equus	ANCESTRAL SPECIES	24	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00640000091653	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340.a	ENSGT00940000153395.a	ENSGT00940000163685	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Horse	MODERN SPECIES	11	NUDT6 (ENSECAG00000014716)	FGF2 (ENSECAG00000014829)	BBS12 (ENSECAG00000003961)	CETN4 (ENSECAG00000014841)	IL21 (ENSECAG00000037491)	ADAD1 (ENSECAG00000016639)	IL2 (ENSECAG00000015616)	KIAA1109 (ENSECAG00000017899)	TRPC3 (ENSECAG00000023168)	BBS7 (ENSECAG00000023824)	CCNA2 (ENSECAG00000054990)	EXOSC9 (ENSECAG00000024732)	SMIM43 (ENSECAG00000044567)	ENSECAG00000036667	ANXA5 (ENSECAG00000006429) #19	QRFPR (ENSECAG00000010698) #22	TNIP3 (ENSECAG00000010953)	NDNF (ENSECAG00000011459)	PRDM5 (ENSECAG00000011516)	ENSECAG00000028123	ENSECAG00000046674	ENSECAG00000013880	PDE5A (ENSECAG00000013957)	FABP2 (ENSECAG00000016345)	C2H4orf3 (ENSECAG00000016365)	USP53 (ENSECAG00000016383)	MYOZ2 (ENSECAG00000017431)	SYNPO2 (ENSECAG00000018218)	SEC24D (ENSECAG00000018309)	ENSECAG00000048147	METTL14 (ENSECAG00000021458)
Donkey	MODERN SPECIES	22	SPATA5 (ENSEASG00005018182)	NUDT6 (ENSEASG00005026410)	BBS12 (ENSEASG00005018190)	ENSEASG00005018192	IL21 (ENSEASG00005023646)	IL2 (ENSEASG00005026942)	ADAD1 (ENSEASG00005018202)	BLTP1 (ENSEASG00005028797)	TRPC3 (ENSEASG00005018240)	BBS7 (ENSEASG00005018299)	CCNA2 (ENSEASG00005018324)	EXOSC9 (ENSEASG00005018326)	SMIM43 (ENSEASG00005029260)	ENSEASG00005036070	ANXA5 (ENSEASG00005018334) #19	QRFPR (ENSEASG00005018340) #22	TNIP3 (ENSEASG00005018349)	NDNF (ENSEASG00005018356)	ENSEASG00005018365	MAD2L1 (ENSEASG00005018388)	ENSEASG00005026719	PDE5A (ENSEASG00005009800)	FABP2 (ENSEASG00005009711)	C4orf3 (ENSEASG00005009709)	USP53 (ENSEASG00005009707)	MYOZ2 (ENSEASG00005009706)	SYNPO2 (ENSEASG00005009703)	SEC24D (ENSEASG00005009700)	METTL14 (ENSEASG00005009697)	PRSS12 (ENSEASG00005009686)	NDST3 (ENSEASG00005009682)
Chiroptera	ANCESTRAL SPECIES	36	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475.f	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337.h	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Microchiroptera	ANCESTRAL SPECIES	38	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475.f	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337.h	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00510000046470.a.a.a.d.b
Microbat	MODERN SPECIES	93																ENSMLUG00000012941 #22
Greater horseshoe bat	MODERN SPECIES	9	SPRY1 (ENSRFEG00010009584)	SPATA5 (ENSRFEG00010009397)	NUDT6 (ENSRFEG00010009362)	FGF2 (ENSRFEG00010009335)	BBS12 (ENSRFEG00010009327)	ENSRFEG00010009313	IL21 (ENSRFEG00010009275)	IL2 (ENSRFEG00010009231)	ADAD1 (ENSRFEG00010008948)	BLTP1 (ENSRFEG00010008636)	TRPC3 (ENSRFEG00010008458)	BBS7 (ENSRFEG00010008388)	CCNA2 (ENSRFEG00010008288)	EXOSC9 (ENSRFEG00010008091)	ENSRFEG00010007759 #19	QRFPR (ENSRFEG00010007677) #22	TNIP3 (ENSRFEG00010007514)	NDNF (ENSRFEG00010007480)	PRDM5 (ENSRFEG00010007397)	ENSRFEG00010007352	PDE5A (ENSRFEG00010007136)	FABP2 (ENSRFEG00010007055)	ENSRFEG00010007022	USP53 (ENSRFEG00010006951)	MYOZ2 (ENSRFEG00010019470)	SYNPO2 (ENSRFEG00010019404)	SEC24D (ENSRFEG00010019312)	METTL14 (ENSRFEG00010019257)	PRSS12 (ENSRFEG00010019073)	NDST3 (ENSRFEG00010018567)	TRAM1L1 (ENSRFEG00010018522)
Atlantogenata	ANCESTRAL SPECIES	49	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340
Afrotheria	ANCESTRAL SPECIES	43	ENSGT00940000155116.b	ENSGT00950000183055.b.a	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163685	ENSGT00940000153395.a	ENSGT00940000154633	ENSGT00940000156916	ENSGT01090000260082.d.a.b	ENSGT00940000158397	ENSGT00550000074980	ENSGT00390000011087	ENSGT00940000159028	ENSGT00510000048394	ENSGT00670000098061	ENSGT00390000012388
Afrotheria_a	ANCESTRAL SPECIES	41	ENSGT00940000155116.b	ENSGT00950000183055.b.a	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00390000003555	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163685	ENSGT00940000153395.a	ENSGT00940000154633	ENSGT00940000156916	ENSGT01090000260082.d.a.b	ENSGT00940000158397	ENSGT00550000074980	ENSGT00390000011087	ENSGT00940000159028	ENSGT00510000048394	ENSGT00670000098061	ENSGT00390000012388
Elephant	MODERN SPECIES	95	ENSLAFG00000016357	ENSLAFG00000016348	FGF2 (ENSLAFG00000008247)	BBS12 (ENSLAFG00000011118)	ENSLAFG00000032441	IL21 (ENSLAFG00000006024)	IL2 (ENSLAFG00000004433)	ADAD1 (ENSLAFG00000012345)	BLTP1 (ENSLAFG00000003708)	TRPC3 (ENSLAFG00000003656)	BBS7 (ENSLAFG00000009519)	CCNA2 (ENSLAFG00000009517)	EXOSC9 (ENSLAFG00000009514)	ANXA5 (ENSLAFG00000015410) #19	ENSLAFG00000028496	QRFPR (ENSLAFG00000008559) #22	TNIP3 (ENSLAFG00000011940)	NDNF (ENSLAFG00000011934)	PRDM5 (ENSLAFG00000006532)	ENSLAFG00000029619	ENSLAFG00000029100	ENSLAFG00000026735	ENSLAFG00000028727	ENSLAFG00000031509	ENSLAFG00000028982	ENSLAFG00000029159	ENSLAFG00000030022	ENSLAFG00000025884	PDE5A (ENSLAFG00000022606)	FABP2 (ENSLAFG00000026610)	C4orf3 (ENSLAFG00000005175)
Hyrax	MODERN SPECIES	6507																QRFPR (ENSPCAG00000004587) #22
Tenrec	MODERN SPECIES	7736																QRFPR (ENSETEG00000007283) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT01070000253744.a.b #22
Armadillo	MODERN SPECIES	3294	BBS12 (ENSDNOG00000030640)	IL21 (ENSDNOG00000024605)	ENSDNOG00000031937	IL2 (ENSDNOG00000009005)	ADAD1 (ENSDNOG00000014986)	ENSDNOG00000046777	ENSDNOG00000009442	ENSDNOG00000042720	ENSDNOG00000031010	BBS7 (ENSDNOG00000010654)	CCNA2 (ENSDNOG00000010635)	EXOSC9 (ENSDNOG00000010614)	ENSDNOG00000039550	ANXA5 (ENSDNOG00000041581) #19	ENSDNOG00000014416	QRFPR (ENSDNOG00000018386) #22
Sloth	MODERN SPECIES	6920																QRFPR (ENSCHOG00000002815) #22
Marsupialia	ANCESTRAL SPECIES	21	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00950000185813	ENSGT00940000156842.q	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00940000157326
Marsupialia_b	ANCESTRAL SPECIES	22	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00950000185813	ENSGT00940000156842.q	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.m	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.b.a.a.a.b.a.a.b.a
Diprotodontia	ANCESTRAL SPECIES	25	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00950000185813	ENSGT00940000156842.q	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.m	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.b.a.a.a.b.a.a.b.a
Diprotodontia_a	ANCESTRAL SPECIES	26	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00950000185813	ENSGT00940000156842.q	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a.m	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.b.a.a.a.b.a.a.b.a
Common wonbat	MODERN SPECIES	641	ENSVURG00010014678	FGF2 (ENSVURG00010014671)	BBS12 (ENSVURG00010014664)	ENSVURG00010014657	ENSVURG00010014642	ENSVURG00010014634	ADAD1 (ENSVURG00010014609)	BLTP1 (ENSVURG00010014411)	TRPC3 (ENSVURG00010012469)	BBS7 (ENSVURG00010012415)	ENSVURG00010012408	ENSVURG00010012402	EXOSC9 (ENSVURG00010012379)	ENSVURG00010012372	ANXA5 (ENSVURG00010012364) #19	QRFPR (ENSVURG00010012358) #22	ENSVURG00010012356	NDNF (ENSVURG00010012353)	PRDM5 (ENSVURG00010012287)	MAD2L1 (ENSVURG00010012269)	PDE5A (ENSVURG00010012234)	FABP2 (ENSVURG00010012222)	USP53 (ENSVURG00010012212)	MYOZ2 (ENSVURG00010012206)	SYNPO2 (ENSVURG00010012195)	SEC24D (ENSVURG00010012166)	METTL14 (ENSVURG00010012138)	PRSS12 (ENSVURG00010012119)	ENSVURG00010012113	FUT10 (ENSVURG00010012101)	CLDN23 (ENSVURG00010012090)
koala	MODERN SPECIES	128	ENSPCIG00000027944	ENSPCIG00000017890	ENSPCIG00000027947	ENSPCIG00000027949	BLTP1 (ENSPCIG00000027953)	TRPC3 (ENSPCIG00000023676)	BBS7 (ENSPCIG00000011187)	ENSPCIG00000011191	EXOSC9 (ENSPCIG00000011193)	ENSPCIG00000036308	ENSPCIG00000027982	ENSPCIG00000027983	SMIM43 (ENSPCIG00000033092)	ENSPCIG00000027984	ANXA5 (ENSPCIG00000027985) #19	QRFPR (ENSPCIG00000004122) #22	ENSPCIG00000036238	NDNF (ENSPCIG00000004131)	PRDM5 (ENSPCIG00000004135)	ENSPCIG00000020514	PDE5A (ENSPCIG00000020522)	FABP2 (ENSPCIG00000020530)	USP53 (ENSPCIG00000020533)	MYOZ2 (ENSPCIG00000020536)	SYNPO2 (ENSPCIG00000011228)	SEC24D (ENSPCIG00000020540)	METTL14 (ENSPCIG00000020546)	PRSS12 (ENSPCIG00000034363)	ENSPCIG00000020554	FUT10 (ENSPCIG00000020559)	CLDN23 (ENSPCIG00000020563)
Wallaby	MODERN SPECIES	9319																QRFPR (ENSMEUG00000007105) #22
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000027078	ENSSHAG00000026481	FGF2 (ENSSHAG00000030193)	BBS12 (ENSSHAG00000011117)	ENSSHAG00000020593	ENSSHAG00000031828	ENSSHAG00000002065	ENSSHAG00000002892	BLTP1 (ENSSHAG00000004565)	TRPC3 (ENSSHAG00000008974)	BBS7 (ENSSHAG00000009710)	EXOSC9 (ENSSHAG00000002000)	CCNA2 (ENSSHAG00000001634)	SMIM43 (ENSSHAG00000023755)	ANXA5 (ENSSHAG00000005161) #19	ENSSHAG00000028698 #22	NDNF (ENSSHAG00000008125)	ENSSHAG00000003919	PRDM5 (ENSSHAG00000003250)	MAD2L1 (ENSSHAG00000008494)	PDE5A (ENSSHAG00000009344)	FABP2 (ENSSHAG00000010832)	USP53 (ENSSHAG00000011019)	MYOZ2 (ENSSHAG00000011793)	SYNPO2 (ENSSHAG00000012401)	ENSSHAG00000022135	SEC24D (ENSSHAG00000014053)	METTL14 (ENSSHAG00000014237)	ENSSHAG00000022088	ENSSHAG00000029943	ENSSHAG00000015329
Opossum	MODERN SPECIES	4	ENSMODG00000018901	ENSMODG00000018903	ENSMODG00000041723	ENSMODG00000040879	ADAD1 (ENSMODG00000018918)	BLTP1 (ENSMODG00000018913)	ENSMODG00000040429	TRPC3 (ENSMODG00000018925)	BBS7 (ENSMODG00000018927)	ENSMODG00000018931	EXOSC9 (ENSMODG00000018934)	ENSMODG00000025397	ENSMODG00000044318	ENSMODG00000018936 #19	ENSMODG00000018937	QRFPR (ENSMODG00000018939) #22	NDNF (ENSMODG00000042861)	ENSMODG00000027696	PRDM5 (ENSMODG00000018942)	MAD2L1 (ENSMODG00000018944)	PDE5A (ENSMODG00000018947)	FABP2 (ENSMODG00000018949)	USP53 (ENSMODG00000018951)	MYOZ2 (ENSMODG00000041210)	SYNPO2 (ENSMODG00000018955)	SEC24D (ENSMODG00000018960)	ENSMODG00000050591	PRSS12 (ENSMODG00000018976)	ENSMODG00000028733	FUT10 (ENSMODG00000018984)	ENSMODG00000047638
Platypus	MODERN SPECIES	3	IBSP (ENSOANG00000043554)	SPP1 (ENSOANG00000042157)	PKD2 (ENSOANG00000013631)	ABCG2 (ENSOANG00000013633)	FGF2 (ENSOANG00000048457)	BBS12 (ENSOANG00000013636)	ENSOANG00000013637	ADAD1 (ENSOANG00000015125)	BLTP1 (ENSOANG00000015120)	TRPC3 (ENSOANG00000015117)	BBS7 (ENSOANG00000015116)	CCNA2 (ENSOANG00000044822)	EXOSC9 (ENSOANG00000015114)	SMIM43 (ENSOANG00000047440)	ANXA5 (ENSOANG00000015113) #19	QRFPR (ENSOANG00000015112) #22	TNIP3 (ENSOANG00000015111)	NDNF (ENSOANG00000015110)	PRDM5 (ENSOANG00000015109)	PDE5A (ENSOANG00000003316)	FABP2 (ENSOANG00000003315)	USP53 (ENSOANG00000003314)	MYOZ2 (ENSOANG00000003313)	SYNPO2 (ENSOANG00000003312)	SEC24D (ENSOANG00000003310)	METTL14 (ENSOANG00000003309)	PDLIM5 (ENSOANG00000048250)	BMPR1B (ENSOANG00000012804)	UNC5C (ENSOANG00000022739)	ENSOANG00000008656	RAP1GDS1 (ENSOANG00000032110)
Sauria	ANCESTRAL SPECIES	6	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	765																ENSPSIG00000006389 #22	ENSPSIG00000007455	ANXA4 (ENSPSIG00000007736)	AAK1 (ENSPSIG00000008507)	ENSPSIG00000000681	NFU1 (ENSPSIG00000010547)	GFPT1 (ENSPSIG00000010620)	ANTXR1 (ENSPSIG00000011543)	GKN1 (ENSPSIG00000012889)	GKN2 (ENSPSIG00000013087)
Chinese turtle	MODERN SPECIES	1243	ANKRD50 (ENSPSIG00000012550)	ENSPSIG00000012530	SPRY1 (ENSPSIG00000000724)	SPATA5 (ENSPSIG00000012182)	NUDT6 (ENSPSIG00000011997)	FGF2 (ENSPSIG00000011987)	BBS12 (ENSPSIG00000011981)	ENSPSIG00000011978	ADAD1 (ENSPSIG00000011531)	BLTP1 (ENSPSIG00000007960)	TRPC3 (ENSPSIG00000006787)	BBS7 (ENSPSIG00000006746)	CCNA2 (ENSPSIG00000016550)	EXOSC9 (ENSPSIG00000016020)	ANXA5 (ENSPSIG00000015417) #19	QRFPR (ENSPSIG00000014459) #22	TNIP3 (ENSPSIG00000014364)	NDNF (ENSPSIG00000014327)	PRDM5 (ENSPSIG00000013505)	MAD2L1 (ENSPSIG00000013328)	RPL7L1 (ENSPSIG00000012919) #14	ZNRF2 (ENSPSIG00000012879)	NOD1 (ENSPSIG00000011927)	GGCT (ENSPSIG00000011509)	ENTPD3 (ENSPSIG00000010870)	RPL14 (ENSPSIG00000010817)	GASK1A (ENSPSIG00000010585)	POMGNT2 (ENSPSIG00000000717)	SNRK (ENSPSIG00000010320)	ANO10 (ENSPSIG00000009669)	ABHD5 (ENSPSIG00000008418)
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Emydidae	ANCESTRAL SPECIES	1	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665.b
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	20	SLC4A5 (ENSTMTG00000004554)	ENSTMTG00000004639	TACR1 (ENSTMTG00000004670)	HK2 (ENSTMTG00000004700)	FIGLA (ENSTMTG00000004813)	ADD2 (ENSTMTG00000004835)	SNRNP27 (ENSTMTG00000004919)	MXD1 (ENSTMTG00000004928)	ENSTMTG00000004953	FAM136A (ENSTMTG00000005034)	SNRPG (ENSTMTG00000005041)	PCYOX1 (ENSTMTG00000005055)	TIA1 (ENSTMTG00000005076)	C2orf42 (ENSTMTG00000005105)	TGFA (ENSTMTG00000005132)	ENSTMTG00000005217 #22	ENSTMTG00000005332	ANXA4 (ENSTMTG00000005355)	AAK1 (ENSTMTG00000005373)	NFU1 (ENSTMTG00000005386)	GFPT1 (ENSTMTG00000005399)	ANTXR1 (ENSTMTG00000005430)	ENSTMTG00000005469	ENSTMTG00000005485	GKN2 (ENSTMTG00000005546)	ENSTMTG00000005575	BMP10 (ENSTMTG00000005616)	ARHGAP25 (ENSTMTG00000005632)	CDS2 (ENSTMTG00000005654)	PCNA (ENSTMTG00000005686)	TMEM230 (ENSTMTG00000005698)
Three-toed box turtle	MODERN SPECIES	26	SPRY1 (ENSTMTG00000008256)	SPATA5 (ENSTMTG00000007451)	NUDT6 (ENSTMTG00000007375)	FGF2 (ENSTMTG00000007357)	BBS12 (ENSTMTG00000007349)	ENSTMTG00000007330	IL21 (ENSTMTG00000007318)	ADAD1 (ENSTMTG00000007293)	BLTP1 (ENSTMTG00000005110)	TRPC3 (ENSTMTG00000004578)	BBS7 (ENSTMTG00000004499)	ENSTMTG00000004476	CCNA2 (ENSTMTG00000004413)	EXOSC9 (ENSTMTG00000004375)	ANXA5 (ENSTMTG00000004342) #19	QRFPR (ENSTMTG00000004301) #22	ENSTMTG00000004235	NDNF (ENSTMTG00000004222)	PRDM5 (ENSTMTG00000004033)	MAD2L1 (ENSTMTG00000003998)	RPL7L1 (ENSTMTG00000003978) #14	PDE5A (ENSTMTG00000003878)	FABP2 (ENSTMTG00000003857)	ENSTMTG00000003845	USP53 (ENSTMTG00000003810)	MYOZ2 (ENSTMTG00000003789)	SYNPO2 (ENSTMTG00000003764)	SEC24D (ENSTMTG00000003712)	METTL14 (ENSTMTG00000003688)	PRSS12 (ENSTMTG00000003631)	NDST3 (ENSTMTG00000003404)
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	709			HK2 (ENSCPBG00000003789)	FIGLA (ENSCPBG00000003776)	ADD2 (ENSCPBG00000003740)	SNRNP27 (ENSCPBG00000003716)	MXD1 (ENSCPBG00000003695)	ENSCPBG00000003673	FAM136A (ENSCPBG00000003652)	SNRPG (ENSCPBG00000003642)	PCYOX1 (ENSCPBG00000003626)	TIA1 (ENSCPBG00000003611)	C2orf42 (ENSCPBG00000003591)	ENSCPBG00000003535	TGFA (ENSCPBG00000003503)	ENSCPBG00000003493 #22	ENSCPBG00000003481	ANXA4 (ENSCPBG00000003449)	ENSCPBG00000003424	ENSCPBG00000003404	NFU1 (ENSCPBG00000003389)	GFPT1 (ENSCPBG00000003360)	ANTXR1 (ENSCPBG00000003314)	ENSCPBG00000003285	ENSCPBG00000003225	GKN2 (ENSCPBG00000003194)	ENSCPBG00000003176	BMP10 (ENSCPBG00000003155)	ARHGAP25 (ENSCPBG00000003140)	CDS2 (ENSCPBG00000003128)	PCNA (ENSCPBG00000003114)
painted turtle	MODERN SPECIES	723	ENSCPBG00000024623	SPRY1 (ENSCPBG00000024626)	SPATA5 (ENSCPBG00000024638)	NUDT6 (ENSCPBG00000024645)	FGF2 (ENSCPBG00000024647)	BBS12 (ENSCPBG00000024648)	ENSCPBG00000024651	IL21 (ENSCPBG00000024653)	ADAD1 (ENSCPBG00000024656)	BLTP1 (ENSCPBG00000024680)	TRPC3 (ENSCPBG00000024709)	BBS7 (ENSCPBG00000024711)	CCNA2 (ENSCPBG00000024712)	EXOSC9 (ENSCPBG00000024725)	ANXA5 (ENSCPBG00000024727) #19	QRFPR (ENSCPBG00000024728) #22	TNIP3 (ENSCPBG00000024730)	NDNF (ENSCPBG00000024732)	PRDM5 (ENSCPBG00000024735)	MAD2L1 (ENSCPBG00000024740)	RPL7L1 (ENSCPBG00000024742) #14	PDE5A (ENSCPBG00000024747)	FABP2 (ENSCPBG00000024751)	ENSCPBG00000024754	USP53 (ENSCPBG00000024758)	MYOZ2 (ENSCPBG00000024760)	SYNPO2 (ENSCPBG00000024764)	SEC24D (ENSCPBG00000024767)	METTL14 (ENSCPBG00000024769)	PRSS12 (ENSCPBG00000024770)	NDST3 (ENSCPBG00000024773)
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00990000214280	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	200											ENSCABG00000021850	TIA1 (ENSCABG00000021876)	C2orf42 (ENSCABG00000022003)	ENSCABG00000022018	TGFA (ENSCABG00000022043)	ENSCABG00000022046 #22	ENSCABG00000022058	ANXA4 (ENSCABG00000022076)
Abingdon island giant tortoise	MODERN SPECIES	452									ADAD1 (ENSCABG00000003441)	BLTP1 (ENSCABG00000003141)	TRPC3 (ENSCABG00000002980)	BBS7 (ENSCABG00000002962)	CCNA2 (ENSCABG00000002956)	EXOSC9 (ENSCABG00000002947)	ANXA5 (ENSCABG00000002213) #19	QRFPR (ENSCABG00000002183) #22
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	11	TACR1 (ENSGEVG00005005891)	HK2 (ENSGEVG00005005955)	FIGLA (ENSGEVG00005006051)	ADD2 (ENSGEVG00005006098)	ENSGEVG00005006202	MXD1 (ENSGEVG00005006225)	ENSGEVG00005006242	ENSGEVG00005006278	FAM136A (ENSGEVG00005006313)	SNRPG (ENSGEVG00005006328)	PCYOX1 (ENSGEVG00005006343)	TIA1 (ENSGEVG00005006370)	C2orf42 (ENSGEVG00005006417)	ENSGEVG00005006438	TGFA (ENSGEVG00005006484)	ENSGEVG00005006558 #22	ENSGEVG00005006663	ANXA4 (ENSGEVG00005006690)	AAK1 (ENSGEVG00005006751)	NFU1 (ENSGEVG00005006898)	ENSGEVG00005006916	GFPT1 (ENSGEVG00005007215)	ANTXR1 (ENSGEVG00005008724)	ENSGEVG00005008860	ENSGEVG00005008902	GKN2 (ENSGEVG00005008940)	ENSGEVG00005009028	BMP10 (ENSGEVG00005009140)	ARHGAP25 (ENSGEVG00005009174)	CDS2 (ENSGEVG00005009211)	PCNA (ENSGEVG00005009251)
Goode s thornscrub tortoise	MODERN SPECIES	19	ENSGEVG00005012464	SPRY1 (ENSGEVG00005012477)	SPATA5 (ENSGEVG00005012635)	NUDT6 (ENSGEVG00005013732)	FGF2 (ENSGEVG00005013752)	ENSGEVG00005014094	IL21 (ENSGEVG00005014222)	ADAD1 (ENSGEVG00005014263)	BLTP1 (ENSGEVG00005014528)	TRPC3 (ENSGEVG00005015627)	BBS7 (ENSGEVG00005015692)	ENSGEVG00005015999	CCNA2 (ENSGEVG00005016027)	EXOSC9 (ENSGEVG00005016149)	ANXA5 (ENSGEVG00005016203) #19	QRFPR (ENSGEVG00005016259) #22	ENSGEVG00005016441	ENSGEVG00005016470	NDNF (ENSGEVG00005016490)	PRDM5 (ENSGEVG00005016679)	MAD2L1 (ENSGEVG00005017277)	RPL7L1 (ENSGEVG00005017295) #14	PDE5A (ENSGEVG00005017370)	FABP2 (ENSGEVG00005017699)	ENSGEVG00005017718	USP53 (ENSGEVG00005017738)	MYOZ2 (ENSGEVG00005017774)	SEC24D (ENSGEVG00005018104)	METTL14 (ENSGEVG00005018566)	PRSS12 (ENSGEVG00005018592)	NDST3 (ENSGEVG00005018685)
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000155116.b	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Australian saltwater crocodile	MODERN SPECIES	32	CCNA2 (ENSCPRG00005004544)	BBS7 (ENSCPRG00005004554)	TRPC3 (ENSCPRG00005004569)	BLTP1 (ENSCPRG00005004590)	ADAD1 (ENSCPRG00005004661)	ENSCPRG00005004676	ENSCPRG00005004679	BBS12 (ENSCPRG00005004683)	FGF2 (ENSCPRG00005004685)	NUDT6 (ENSCPRG00005004688)	SPATA5 (ENSCPRG00005004696)	ANKRD50 (ENSCPRG00005004727)	ENSCPRG00005004731	FAT4 (ENSCPRG00005004736)	INTU (ENSCPRG00005004747)	QRFPR (ENSCPRG00005004766) #22	ENSCPRG00005004795	NDNF (ENSCPRG00005004799)	PRDM5 (ENSCPRG00005004805)	MAD2L1 (ENSCPRG00005004810)	RPL7L1 (ENSCPRG00005004817) #14	PDE5A (ENSCPRG00005004828)	FABP2 (ENSCPRG00005004836)	USP53 (ENSCPRG00005004843)	MYOZ2 (ENSCPRG00005004848)	SYNPO2 (ENSCPRG00005004859)	SEC24D (ENSCPRG00005004870)	METTL14 (ENSCPRG00005004897)	PRSS12 (ENSCPRG00005004901)	NDST3 (ENSCPRG00005004913)	PFN1 (ENSCPRG00005004928)
Aves	ANCESTRAL SPECIES	3	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
African ostrich	MODERN SPECIES	604										ENSSCUG00000009274	TRPC3 (ENSSCUG00000009280)	BBS7 (ENSSCUG00000009291)	CCNA2 (ENSSCUG00000009308)	EXOSC9 (ENSSCUG00000009320)	ANXA5 (ENSSCUG00000009322) #19	QRFPR (ENSSCUG00000009323) #22	TNIP3 (ENSSCUG00000009329)	NDNF (ENSSCUG00000009334)	PRDM5 (ENSSCUG00000009336)	MAD2L1 (ENSSCUG00000009345)	RPL7L1 (ENSSCUG00000009348) #14	PDE5A (ENSSCUG00000009353)	FABP2 (ENSSCUG00000009355)	USP53 (ENSSCUG00000009359)	MYOZ2 (ENSSCUG00000009361)	ENSSCUG00000009363	SYNPO2 (ENSSCUG00000009365)	SEC24D (ENSSCUG00000009366)	METTL14 (ENSSCUG00000009369)	ENSSCUG00000009370	PRSS12 (ENSSCUG00000009374)
Neognathae	ANCESTRAL SPECIES	5	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Great tit	MODERN SPECIES	23	SPRY1 (ENSPMJG00000007747)	SPATA5 (ENSPMJG00000007727)	NUDT6 (ENSPMJG00000007723)	FGF2 (ENSPMJG00000007722)	BBS12 (ENSPMJG00000007721)	ENSPMJG00000007717	IL21 (ENSPMJG00000007706)	ENSPMJG00000007658	ADAD1 (ENSPMJG00000007657)	BLTP1 (ENSPMJG00000007479)	TRPC3 (ENSPMJG00000007476)	BBS7 (ENSPMJG00000007474)	CCNA2 (ENSPMJG00000007469)	EXOSC9 (ENSPMJG00000007466)	ANXA5 (ENSPMJG00000007464) #19	QRFPR (ENSPMJG00000007442) #22	TNIP3 (ENSPMJG00000007441)	NDNF (ENSPMJG00000007439)	PRDM5 (ENSPMJG00000007437)	RPL7L1 (ENSPMJG00000007415) #14	MAD2L1 (ENSPMJG00000007411)	PDE5A (ENSPMJG00000007371)	FABP2 (ENSPMJG00000007348)	ENSPMJG00000007346	USP53 (ENSPMJG00000007340)	MYOZ2 (ENSPMJG00000007338)	SYNPO2 (ENSPMJG00000007324)	SEC24D (ENSPMJG00000007297)	METTL14 (ENSPMJG00000007279)	PRSS12 (ENSPMJG00000007273)	NDST3 (ENSPMJG00000005910)
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168
Passeriformes_g	ANCESTRAL SPECIES	31	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168
Passeroidea	ANCESTRAL SPECIES	33	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665	ENSGT00940000157168
Zebra finch	MODERN SPECIES	25	SPATA5 (ENSTGUG00000002029)	NUDT6 (ENSTGUG00000023460)	FGF2 (ENSTGUG00000026253)	BBS12 (ENSTGUG00000002016)	ENSTGUG00000002010	ENSTGUG00000002007	ENSTGUG00000001994	ADAD1 (ENSTGUG00000001990)	BLTP1 (ENSTGUG00000001968)	TRPC3 (ENSTGUG00000001954)	ENSTGUG00000019100	BBS7 (ENSTGUG00000001949)	CCNA2 (ENSTGUG00000001941)	EXOSC9 (ENSTGUG00000001938)	ANXA5 (ENSTGUG00000001930) #19	QRFPR (ENSTGUG00000001929) #22	TNIP3 (ENSTGUG00000001928)	NDNF (ENSTGUG00000001927)	PRDM5 (ENSTGUG00000001920)	MAD2L1 (ENSTGUG00000001917)	RPL7L1 (ENSTGUG00000001916) #14	PDE5A (ENSTGUG00000001899)	FABP2 (ENSTGUG00000001896)	ENSTGUG00000029163	USP53 (ENSTGUG00000001892)	MYOZ2 (ENSTGUG00000001883)	SYNPO2 (ENSTGUG00000028670)	SEC24D (ENSTGUG00000001870)	METTL14 (ENSTGUG00000001867)	PRSS12 (ENSTGUG00000001861)	NDST3 (ENSTGUG00000001856)
Common canary	MODERN SPECIES	39	SPRY1 (ENSSCAG00000002527)	SPATA5 (ENSSCAG00000002522)	NUDT6 (ENSSCAG00000002517)	FGF2 (ENSSCAG00000002513)	BBS12 (ENSSCAG00000002512)	ENSSCAG00000002507	ENSSCAG00000002504	ENSSCAG00000002496	ADAD1 (ENSSCAG00000002448)	BLTP1 (ENSSCAG00000002411)	TRPC3 (ENSSCAG00000002395)	BBS7 (ENSSCAG00000002383)	CCNA2 (ENSSCAG00000002315)	EXOSC9 (ENSSCAG00000002289)	ANXA5 (ENSSCAG00000002280) #19	QRFPR (ENSSCAG00000002273) #22	TNIP3 (ENSSCAG00000002251)	NDNF (ENSSCAG00000002243)	PRDM5 (ENSSCAG00000002231)	MAD2L1 (ENSSCAG00000002220)	RPL7L1 (ENSSCAG00000002203) #14	PDE5A (ENSSCAG00000002165)	FABP2 (ENSSCAG00000002151)	USP53 (ENSSCAG00000002126)	MYOZ2 (ENSSCAG00000002118)	SYNPO2 (ENSSCAG00000002112)	SEC24D (ENSSCAG00000001820)	METTL14 (ENSSCAG00000001756)	PRSS12 (ENSSCAG00000001746)	NDST4 (ENSSCAG00000001296)	NDST3 (ENSSCAG00000001115)
Medium ground finch	MODERN SPECIES	138	SPRY1 (ENSGFOG00000006041)	SPATA5 (ENSGFOG00000006035)	NUDT6 (ENSGFOG00000006025)	FGF2 (ENSGFOG00000006017)	ENSGFOG00000005981	ENSGFOG00000005950	ENSGFOG00000005944	ENSGFOG00000005935	ENSGFOG00000005926	BLTP1 (ENSGFOG00000005868)	TRPC3 (ENSGFOG00000005821)	BBS7 (ENSGFOG00000009520)	CCNA2 (ENSGFOG00000009505)	EXOSC9 (ENSGFOG00000009464)	ANXA5 (ENSGFOG00000009447) #19	QRFPR (ENSGFOG00000009437) #22	ENSGFOG00000009417	NDNF (ENSGFOG00000009408)	PRDM5 (ENSGFOG00000009395)	MAD2L1 (ENSGFOG00000009386)	RPL7L1 (ENSGFOG00000009374) #14	PDE5A (ENSGFOG00000009322)	FABP2 (ENSGFOG00000009310)	USP53 (ENSGFOG00000009274)	MYOZ2 (ENSGFOG00000009258)	SYNPO2 (ENSGFOG00000009253)	SEC24D (ENSGFOG00000009227)
Flycatcher	MODERN SPECIES	22	SPRY1 (ENSFALG00000008175)	SPATA5 (ENSFALG00000008181)	NUDT6 (ENSFALG00000023375)	FGF2 (ENSFALG00000008194)	BBS12 (ENSFALG00000008206)	ENSFALG00000008210	ENSFALG00000008212	ENSFALG00000008216	ADAD1 (ENSFALG00000008219)	BLTP1 (ENSFALG00000008242)	TRPC3 (ENSFALG00000008286)	BBS7 (ENSFALG00000008291)	CCNA2 (ENSFALG00000023056)	EXOSC9 (ENSFALG00000008302)	ANXA5 (ENSFALG00000008329) #19	QRFPR (ENSFALG00000008351) #22	TNIP3 (ENSFALG00000008363)	NDNF (ENSFALG00000008372)	PRDM5 (ENSFALG00000008381)	MAD2L1 (ENSFALG00000000864)	ENSFALG00000024838 #14	PDE5A (ENSFALG00000000873)	FABP2 (ENSFALG00000000880)	USP53 (ENSFALG00000000891)	MYOZ2 (ENSFALG00000000896)	SYNPO2 (ENSFALG00000000899)	SEC24D (ENSFALG00000000903)	PRSS12 (ENSFALG00000002120)	METTL14 (ENSFALG00000002126)	NDST3 (ENSFALG00000002104)	NDST4 (ENSFALG00000001072)
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Golden eagle	MODERN SPECIES		SPATA5 (ENSACCG00020011529)	NUDT6 (ENSACCG00020011598)	FGF2 (ENSACCG00020011627)	BBS12 (ENSACCG00020011663)	ENSACCG00020011679	IL21 (ENSACCG00020011704)	ENSACCG00020011807	ADAD1 (ENSACCG00020011866)	ENSACCG00020012166	ENSACCG00020012654	TRPC3 (ENSACCG00020012731)	BBS7 (ENSACCG00020012854)	CCNA2 (ENSACCG00020012887)	EXOSC9 (ENSACCG00020012912)	ANXA5 (ENSACCG00020012937) #19	QRFPR (ENSACCG00020012996) #22	TNIP3 (ENSACCG00020013036)	NDNF (ENSACCG00020013049)	PRDM5 (ENSACCG00020013271)	MAD2L1 (ENSACCG00020013364)	RPL7L1 (ENSACCG00020013392) #14	PDE5A (ENSACCG00020013796)	FABP2 (ENSACCG00020013940)	ENSACCG00020013948	USP53 (ENSACCG00020013962)	MYOZ2 (ENSACCG00020013985)	SYNPO2 (ENSACCG00020014000)	SEC24D (ENSACCG00020014035)	METTL14 (ENSACCG00020014083)	PRSS12 (ENSACCG00020014119)	NDST3 (ENSACCG00020014156)
Kakapo	MODERN SPECIES	20	SPRY1 (ENSSHBG00005010979)	SPATA5 (ENSSHBG00005011030)	NUDT6 (ENSSHBG00005011306)	FGF2 (ENSSHBG00005011322)	BBS12 (ENSSHBG00005011353)	ENSSHBG00005011364	ENSSHBG00005011441	ENSSHBG00005011459	ADAD1 (ENSSHBG00005011494)	BLTP1 (ENSSHBG00005011613)	TRPC3 (ENSSHBG00005011803)	BBS7 (ENSSHBG00005012042)	CCNA2 (ENSSHBG00005012065)	EXOSC9 (ENSSHBG00005012089)	ANXA5 (ENSSHBG00005012114) #19	QRFPR (ENSSHBG00005012223) #22	NDNF (ENSSHBG00005012279)	PRDM5 (ENSSHBG00005012300)	MAD2L1 (ENSSHBG00005012317)	RPL7L1 (ENSSHBG00005012330) #14	PDE5A (ENSSHBG00005012439)	FABP2 (ENSSHBG00005014095)	ENSSHBG00005014105	USP53 (ENSSHBG00005014131)	MYOZ2 (ENSSHBG00005014150)	SYNPO2 (ENSSHBG00005014167)	ENSSHBG00005014183	SEC24D (ENSSHBG00005014200)	BMP3 (ENSSHBG00005014244)	FGF5 (ENSSHBG00005014259)	PRDM8 (ENSSHBG00005014285)
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Anatidae	ANCESTRAL SPECIES	2	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350
Pink-footed goose	MODERN SPECIES	199	SPRY1 (ENSABRG00000007845)	SPATA5 (ENSABRG00000007190)	NUDT6 (ENSABRG00000007130)	FGF2 (ENSABRG00000007127)	BBS12 (ENSABRG00000007119)	ENSABRG00000007111	IL21 (ENSABRG00000007109)	ENSABRG00000007087	ADAD1 (ENSABRG00000007041)	BLTP1 (ENSABRG00000006617)	TRPC3 (ENSABRG00000005483)	BBS7 (ENSABRG00000005242)	CCNA2 (ENSABRG00000005221)	EXOSC9 (ENSABRG00000005054)	ANXA5 (ENSABRG00000004916) #19	QRFPR (ENSABRG00000004907) #22
Duck	MODERN SPECIES	22	SPRY1 (ENSAPLG00000001284)	SPATA5 (ENSAPLG00000007122)	NUDT6 (ENSAPLG00000007045)	FGF2 (ENSAPLG00000007001)	BBS12 (ENSAPLG00000001275)	ENSAPLG00000006954	IL21 (ENSAPLG00000006911)	ADAD1 (ENSAPLG00000006694)	ENSAPLG00000028504	ENSAPLG00000022216	TRPC3 (ENSAPLG00000005541)	BBS7 (ENSAPLG00000005255)	CCNA2 (ENSAPLG00000005183)	EXOSC9 (ENSAPLG00000004920)	ANXA5 (ENSAPLG00000004530) #19	QRFPR (ENSAPLG00000014381) #22	TNIP3 (ENSAPLG00000014144)	NDNF (ENSAPLG00000018459)	PRDM5 (ENSAPLG00000013828)	MAD2L1 (ENSAPLG00000013807)	RPL7L1 (ENSAPLG00000013503) #14	PDE5A (ENSAPLG00000013130)	ENSAPLG00000029776	USP53 (ENSAPLG00000027499)	MYOZ2 (ENSAPLG00000012707)	SYNPO2 (ENSAPLG00000012703)	ENSAPLG00000022788	ABRAXAS1 (ENSAPLG00000012556)	ENSAPLG00000012544	HELQ (ENSAPLG00000012292)	HPSE (ENSAPLG00000012084)
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Japanese quail	MODERN SPECIES	22	SPATA5 (ENSCJPG00005002065)	ENSCJPG00005003261	NUDT6 (ENSCJPG00005003263)	FGF2 (ENSCJPG00005003267)	BBS12 (ENSCJPG00005003274)	ENSCJPG00005003276	IL21 (ENSCJPG00005003279)	ENSCJPG00005003281	ADAD1 (ENSCJPG00005003286)	BLTP1 (ENSCJPG00005003320)	TRPC3 (ENSCJPG00005003621)	BBS7 (ENSCJPG00005003622)	CCNA2 (ENSCJPG00005003625)	EXOSC9 (ENSCJPG00005003629)	ANXA5 (ENSCJPG00005003633) #19	QRFPR (ENSCJPG00005003635) #22	TNIP3 (ENSCJPG00005003643)	NDNF (ENSCJPG00005003647)	PRDM5 (ENSCJPG00005003653)	MAD2L1 (ENSCJPG00005003676)	RPL7L1 (ENSCJPG00005003680) #14	PDE5A (ENSCJPG00005003687)	USP53 (ENSCJPG00005003725)	FABP2 (ENSCJPG00005003730)	ENSCJPG00005003731	ENSCJPG00005003732	MYOZ2 (ENSCJPG00005003734)	SYNPO2 (ENSCJPG00005003736)	ENSCJPG00005003737	METTL14 (ENSCJPG00005003753)	PRSS12 (ENSCJPG00005003756)
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00390000010494	ENSGT01030000235552	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Turkey	MODERN SPECIES	24	SPRY1 (ENSMGAG00000015724)	SPATA5 (ENSMGAG00000010551)	NUDT6 (ENSMGAG00000010568)	FGF2 (ENSMGAG00000010572)	BBS12 (ENSMGAG00000010562)	ENSMGAG00000010564	IL21 (ENSMGAG00000010573)	ENSMGAG00000010577	ADAD1 (ENSMGAG00000010585)	BLTP1 (ENSMGAG00000010589)	TRPC3 (ENSMGAG00000010636)	BBS7 (ENSMGAG00000010639)	CCNA2 (ENSMGAG00000010647)	EXOSC9 (ENSMGAG00000010649)	ANXA5 (ENSMGAG00000010665) #19	QRFPR (ENSMGAG00000010688) #22	TNIP3 (ENSMGAG00000010701)	NDNF (ENSMGAG00000010709)	PRDM5 (ENSMGAG00000010710)	MAD2L1 (ENSMGAG00000010720)	ENSMGAG00000010724 #14	PDE5A (ENSMGAG00000010728)	FABP2 (ENSMGAG00000010754)	USP53 (ENSMGAG00000010759)	MYOZ2 (ENSMGAG00000010771)	SYNPO2 (ENSMGAG00000010819)	SEC24D (ENSMGAG00000010783)	METTL14 (ENSMGAG00000010804)	PRSS12 (ENSMGAG00000010824)	NDST3 (ENSMGAG00000010843)	NDST4 (ENSMGAG00000010849)
Chicken	MODERN SPECIES	33	SPRY1 (ENSGALG00010004116)	SPATA5 (ENSGALG00010006022)	NUDT6 (ENSGALG00010004131)	FGF2 (ENSGALG00010004219)	BBS12 (ENSGALG00010004181)	CETN2 (ENSGALG00010004225)	IL21 (ENSGALG00010004228)	IL2 (ENSGALG00010004232)	ADAD1 (ENSGALG00010004235)	BLTP1 (ENSGALG00010004243)	TRPC3 (ENSGALG00010005198)	BBS7 (ENSGALG00010005214)	CCNA2 (ENSGALG00010005217)	EXOSC9 (ENSGALG00010005227)	ANXA5 (ENSGALG00010005260) #19	QRFPR (ENSGALG00010005300) #22	TNIP3 (ENSGALG00010005357)	NDNF (ENSGALG00010005399)	PRDM5 (ENSGALG00010005434)	MAD2L1 (ENSGALG00010005435)	RPL7L1 (ENSGALG00010005456) #14	PDE5A (ENSGALG00010005499)	FABP2 (ENSGALG00010005505)	ENSGALG00010005572	USP53 (ENSGALG00010005507)	MYOZ2 (ENSGALG00010005510)	SYNPO2 (ENSGALG00010005522)	SEC24D (ENSGALG00010005543)	METTL14 (ENSGALG00010005551)	PRSS12 (ENSGALG00010005555)	NDST3 (ENSGALG00010005567)
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
tuatara	MODERN SPECIES	158																QRFPR (ENSSPUG00000003163) #22
Episquamata	ANCESTRAL SPECIES	3	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00390000007235	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Laterata	ANCESTRAL SPECIES	9	ENSGT00940000155719.b	ENSGT00940000155116.b	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00390000007235	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000160665
Common wall lizard	MODERN SPECIES	17	SPRY1 (ENSPMRG00000008616)	SPATA5 (ENSPMRG00000008625)	NUDT6 (ENSPMRG00000008636)	FGF2 (ENSPMRG00000008644)	ENSPMRG00000008647	ENSPMRG00000008654	ENSPMRG00000008656	BBS12 (ENSPMRG00000008662)	ENSPMRG00000008670	BLTP1 (ENSPMRG00000008808)	TRPC3 (ENSPMRG00000009369)	BBS7 (ENSPMRG00000009509)	CCNA2 (ENSPMRG00000009625)	EXOSC9 (ENSPMRG00000009633)	ANXA5 (ENSPMRG00000009650) #19	QRFPR (ENSPMRG00000009666) #22	TNIP3 (ENSPMRG00000009681)	NDNF (ENSPMRG00000009696)	PRDM5 (ENSPMRG00000009710)	ENSPMRG00000009743	ENSPMRG00000009755	REC114 (ENSPMRG00000009771)	MAD2L1 (ENSPMRG00000009784)	RPL7L1 (ENSPMRG00000009797) #14	ENSPMRG00000009839	ENSPMRG00000009955	ENSPMRG00000009959	USP53 (ENSPMRG00000009970)	MYOZ2 (ENSPMRG00000009978)	SYNPO2 (ENSPMRG00000009987)	SEC24D (ENSPMRG00000010010)
Argentine black and white tegu	MODERN SPECIES	11	FAT4 (ENSSMRG00000015556)	ANKRD50 (ENSSMRG00000015555)	SPRY1 (ENSSMRG00000015553)	SPATA5 (ENSSMRG00000015552)	NUDT6 (ENSSMRG00000015551)	FGF2 (ENSSMRG00000015550)	BBS12 (ENSSMRG00000015549)	ENSSMRG00000015548	ENSSMRG00000015547	BLTP1 (ENSSMRG00000015546)	TRPC3 (ENSSMRG00000015423)	BBS7 (ENSSMRG00000015422)	CCNA2 (ENSSMRG00000015421)	EXOSC9 (ENSSMRG00000015420)	ANXA5 (ENSSMRG00000015419) #19	QRFPR (ENSSMRG00000015416) #22	TNIP3 (ENSSMRG00000015415)	NDNF (ENSSMRG00000015414)	PRDM5 (ENSSMRG00000015412)	ENSSMRG00000015411	REC114 (ENSSMRG00000015410)	MAD2L1 (ENSSMRG00000015409)	RPL7L1 (ENSSMRG00000015408) #14	PDE5A (ENSSMRG00000015407)	FABP2 (ENSSMRG00000015406)	USP53 (ENSSMRG00000015405)	MYOZ2 (ENSSMRG00000015404)	SYNPO2 (ENSSMRG00000015403)	SEC24D (ENSSMRG00000015401)	METTL14 (ENSSMRG00000015400)	PRSS12 (ENSSMRG00000015399)
Toxicofera	ANCESTRAL SPECIES	12	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00390000007235	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Elapidae	ANCESTRAL SPECIES	11	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583.a	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b.i	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00390000007235	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Indian cobra	MODERN SPECIES	3	ANKRD50 (ENSNNAG00000004319)	SPRY1 (ENSNNAG00000004354)	SPATA5 (ENSNNAG00000004389)	NUDT6 (ENSNNAG00000004481)	FGF2 (ENSNNAG00000004499)	BBS12 (ENSNNAG00000004509)	ENSNNAG00000004517	ADAD1 (ENSNNAG00000004556)	BLTP1 (ENSNNAG00000004928)	TRPC3 (ENSNNAG00000005662)	BBS7 (ENSNNAG00000005684)	CCNA2 (ENSNNAG00000005727)	EXOSC9 (ENSNNAG00000005748)	SMIM43 (ENSNNAG00000005782)	ANXA5 (ENSNNAG00000005796) #19	QRFPR (ENSNNAG00000005833) #22	NDNF (ENSNNAG00000005872)	PRDM5 (ENSNNAG00000005909)	REC114 (ENSNNAG00000005964)	MAD2L1 (ENSNNAG00000005989)	RPL7L1 (ENSNNAG00000006031) #14	PDE5A (ENSNNAG00000006237)	USP53 (ENSNNAG00000006359)	FABP2 (ENSNNAG00000006465)	ENSNNAG00000006473	MYOZ2 (ENSNNAG00000006481)	SYNPO2 (ENSNNAG00000006499)	SEC24D (ENSNNAG00000006527)	METTL14 (ENSNNAG00000006582)	PRSS12 (ENSNNAG00000006616)	SGCZ (ENSNNAG00000006675)
Elapidae_a	ANCESTRAL SPECIES	13	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583.a	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b.i	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00390000007235	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	10892																ENSLLTG00000013366 #22
Blue-lipped sea krait	MODERN SPECIES	7740																ENSLLTG00000011683 #22
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT00950000183055.b.a	ENSGT00940000157323	ENSGT00960000193149	ENSGT00390000008458	ENSGT00940000161583.a	ENSGT00390000008984	ENSGT00940000162309	ENSGT00940000156842	ENSGT00640000091487	ENSGT01060000248588.a.c.b.i	ENSGT00390000012346	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988 #19	ENSGT01070000253744.a.b #22	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00390000007235	ENSGT00940000153395.a	ENSGT00950000182878.b.b #14	ENSGT00940000155475	ENSGT00800000124172	ENSGT01030000235417	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Eastern brown snake	MODERN SPECIES	9	ANKRD50 (ENSPTXG00000009033)	SPRY1 (ENSPTXG00000009032)	SPATA5 (ENSPTXG00000009031)	NUDT6 (ENSPTXG00000009029)	FGF2 (ENSPTXG00000009028)	BBS12 (ENSPTXG00000009027)	ENSPTXG00000009026	ADAD1 (ENSPTXG00000008957)	BLTP1 (ENSPTXG00000008764)	TRPC3 (ENSPTXG00000008757)	BBS7 (ENSPTXG00000008754)	CCNA2 (ENSPTXG00000008753)	EXOSC9 (ENSPTXG00000008752)	SMIM43 (ENSPTXG00000008751)	ANXA5 (ENSPTXG00000008750) #19	QRFPR (ENSPTXG00000008687) #22	NDNF (ENSPTXG00000003994)	PRDM5 (ENSPTXG00000003993)	REC114 (ENSPTXG00000003990)	MAD2L1 (ENSPTXG00000003986)	RPL7L1 (ENSPTXG00000003981) #14	PDE5A (ENSPTXG00000003978)	FABP2 (ENSPTXG00000003975)	ENSPTXG00000003974	USP53 (ENSPTXG00000003973)	MYOZ2 (ENSPTXG00000003972)	SYNPO2 (ENSPTXG00000003971)	SEC24D (ENSPTXG00000003970)	METTL14 (ENSPTXG00000003969)	PRSS12 (ENSPTXG00000003966)	SGCZ (ENSPTXG00000003964)
Mainland tiger snake	MODERN SPECIES	18	SPRY1 (ENSNSUG00000008593)	SPATA5 (ENSNSUG00000008594)	ENSNSUG00000008762	NUDT6 (ENSNSUG00000008763)	FGF2 (ENSNSUG00000008764)	ENSNSUG00000008766	ADAD1 (ENSNSUG00000008769)	ENSNSUG00000008798	ENSNSUG00000008799	ENSNSUG00000008800	TRPC3 (ENSNSUG00000008801)	BBS7 (ENSNSUG00000008847)	CCNA2 (ENSNSUG00000008848)	EXOSC9 (ENSNSUG00000008849)	ANXA5 (ENSNSUG00000008850) #19	QRFPR (ENSNSUG00000008851) #22	NDNF (ENSNSUG00000008852)	ENSNSUG00000008854	MAD2L1 (ENSNSUG00000008855)	RPL7L1 (ENSNSUG00000008856) #14	PDE5A (ENSNSUG00000008857)	FABP2 (ENSNSUG00000008860)	ENSNSUG00000008861	USP53 (ENSNSUG00000008862)	MYOZ2 (ENSNSUG00000008863)	SYNPO2 (ENSNSUG00000008864)	ENSNSUG00000008865	SEC24D (ENSNSUG00000008866)	METTL14 (ENSNSUG00000009171)	PRSS12 (ENSNSUG00000009172)	SGCZ (ENSNSUG00000009177)
Lizard	DUPLICATION
Lizard	MODERN SPECIES	4	FGF2 (ENSACAG00000011890)	ENSACAG00000011925	ENSACAG00000036714	ADAD1 (ENSACAG00000011970)	ENSACAG00000034967	ENSACAG00000011989	ENSACAG00000039592	ENSACAG00000043695	ENSACAG00000035568	ENSACAG00000043841	TRPC3 (ENSACAG00000012238)	BBS7 (ENSACAG00000012540)	CCNA2 (ENSACAG00000012630)	EXOSC9 (ENSACAG00000012689)	ANXA5 (ENSACAG00000012765) #19	ENSACAG00000012952 #22	TNIP3 (ENSACAG00000012990)	NDNF (ENSACAG00000012994)	PRDM5 (ENSACAG00000012999)	ENSACAG00000013160	MAD2L1 (ENSACAG00000013167)	RPL7L1 (ENSACAG00000044289) #14	PDE5A (ENSACAG00000013216)	FABP2 (ENSACAG00000013353)	ENSACAG00000037542	USP53 (ENSACAG00000013366)	MYOZ2 (ENSACAG00000013422)	SYNPO2 (ENSACAG00000013437)	SEC24D (ENSACAG00000013448)	ENSACAG00000041851	METTL14 (ENSACAG00000013631)
Lizard	MODERN SPECIES	1986																ENSACAG00000003885 #22
Anura	ANCESTRAL SPECIES		ENSGT00940000157488	ENSGT00940000165233	ENSGT00940000153745.a	ENSGT00950000182787.C	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00390000011031	ENSGT00940000154962.A	ENSGT00390000011206.a	ENSGT00510000046985	ENSGT00390000006707	ENSGT00940000160058.g	ENSGT01070000253744.a.b #22	ENSGT00940000156185	ENSGT00940000156575	ENSGT00940000155968	ENSGT00940000164785	ENSGT00940000158488	ENSGT00940000156522	ENSGT00930000150969.A.c.b.a	ENSGT00930000150969.A.c.b.b	ENSGT00940000156279	ENSGT00950000183015.A	ENSGT00940000158877	ENSGT00390000004965	ENSGT00390000008694.b.b	ENSGT00950000182953.C.c	ENSGT00510000049083
Frog	DUPLICATION
Frog	MODERN SPECIES	3	ENSXETG00000045068	tacr1 (ENSXETG00000008524)	hkdc1 (ENSXETG00000008520)	figla (ENSXETG00000024917)	add2 (ENSXETG00000008519)	ENSXETG00000049024	snrnp27 (ENSXETG00000008518)	mxd1 (ENSXETG00000033966)	nif (ENSXETG00000008516)	c2orf42 (ENSXETG00000008515)	tia1 (ENSXETG00000008514)	pcyox1 (ENSXETG00000008513)	snrpg (ENSXETG00000008512)	fam136a (ENSXETG00000008511)	tgfa (ENSXETG00000024911)	qrfprl2.2 (ENSXETG00000037880) #22	gmcl1 (ENSXETG00000040481)	ENSXETG00000047838	anxa4 (ENSXETG00000008206)	aak1 (ENSXETG00000008205)	nfu1 (ENSXETG00000008202)	gfpt1 (ENSXETG00000008199)	antxr1 (ENSXETG00000008198)	ENSXETG00000042715	GKN1 (ENSXETG00000030838)	ENSXETG00000039338	bmp10 (ENSXETG00000047530)	arhgap25 (ENSXETG00000008195)	cds2 (ENSXETG00000008194)	pcna (ENSXETG00000008193)	tmem230 (ENSXETG00000024909)
Frog	MODERN SPECIES		arhgef38 (ENSXETG00000014106)	ints12 (ENSXETG00000014107)	gstcd (ENSXETG00000014108)	npnt (ENSXETG00000014111)	ENSXETG00000024523	tbck (ENSXETG00000027870)	aimp1 (ENSXETG00000019862)	gimd1 (ENSXETG00000039071)	ENSXETG00000039437	ENSXETG00000027875	ENSXETG00000042108	ENSXETG00000044811	dkk2 (ENSXETG00000019859)	papss1 (ENSXETG00000019855)	sgms2 (ENSXETG00000019854)	qrfpr (ENSXETG00000002104) #22	tnip3 (ENSXETG00000043582)	ndnf (ENSXETG00000002103)	prdm5 (ENSXETG00000002101)	mad2l1 (ENSXETG00000002100)	pde5a (ENSXETG00000004046)	fabp2 (ENSXETG00000004045)	usp53 (ENSXETG00000004044)	myoz2 (ENSXETG00000004043)	SYNPO2 (ENSXETG00000047286)	ENSXETG00000044533	sec24d (ENSXETG00000004039)	mettl14 (ENSXETG00000004037)	ctu1 (ENSXETG00000004036)	ENSXETG00000042908	prss12 (ENSXETG00000004035)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000004737	ENSLLEG00000004743	ADD2 (ENSLLEG00000004786)	SNRNP27 (ENSLLEG00000004861)	MXD1 (ENSLLEG00000004878)	ENSLLEG00000004888	ENSLLEG00000004895	C2orf42 (ENSLLEG00000004924)	ENSLLEG00000004952	TIA1 (ENSLLEG00000004976)	PCYOX1 (ENSLLEG00000005063)	SNRPG (ENSLLEG00000005082)	FAM136A (ENSLLEG00000005102)	ENSLLEG00000005119	TGFA (ENSLLEG00000005142)	ENSLLEG00000005184 #22	ENSLLEG00000005206	ANXA4 (ENSLLEG00000005252)	ENSLLEG00000005377	ENSLLEG00000005393	AAK1 (ENSLLEG00000005427)	ENSLLEG00000005592	ENSLLEG00000005758	ANTXR1 (ENSLLEG00000005920)	ENSLLEG00000006117	ENSLLEG00000006203	GKN1 (ENSLLEG00000006226)	ENSLLEG00000006262	BMP10 (ENSLLEG00000006305)	ARHGAP25 (ENSLLEG00000006326)	CDS2 (ENSLLEG00000006374)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000003685	ENSLLEG00000003690	ELF2 (ENSLLEG00000003697)	NOCT (ENSLLEG00000003717)	ENSLLEG00000003731	CTSO (ENSLLEG00000003741)	TDO2 (ENSLLEG00000003763)	ENSLLEG00000003774	ENSLLEG00000000202	BBS7 (ENSLLEG00000000232)	CCNA2 (ENSLLEG00000000305)	EXOSC9 (ENSLLEG00000000338)	SMIM43 (ENSLLEG00000000382)	ANXA5 (ENSLLEG00000000414) #19	ENSLLEG00000000479	QRFPR (ENSLLEG00000000496) #22	ENSLLEG00000000514	NDNF (ENSLLEG00000000556)	PRDM5 (ENSLLEG00000000649)	MAD2L1 (ENSLLEG00000000742)	ENSLLEG00000000762	PDE5A (ENSLLEG00000000792)	FABP2 (ENSLLEG00000001006)	ENSLLEG00000001026	USP53 (ENSLLEG00000001057)	MYOZ2 (ENSLLEG00000001150)	SYNPO2 (ENSLLEG00000001171)	ENSLLEG00000001189	ENSLLEG00000001201	ENSLLEG00000001216	METTL14 (ENSLLEG00000001282)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	244	ENSLACG00000016571	ENSLACG00000016676	HK2 (ENSLACG00000016947)	ENSLACG00000017151	ADD2 (ENSLACG00000017281)	SNRNP27 (ENSLACG00000017387)	MXD1 (ENSLACG00000017438)	zgc:65851 (ENSLACG00000017637)	ENSLACG00000017769	C2orf42 (ENSLACG00000017805)	TIA1 (ENSLACG00000017828)	PCYOX1 (ENSLACG00000017877)	SNRPG (ENSLACG00000017900)	FAM136A (ENSLACG00000017908)	TGFA (ENSLACG00000017957)	ENSLACG00000018029 #22	gmcl1 (ENSLACG00000018047)	ANXA4 (ENSLACG00000018089)	AAK1 (ENSLACG00000018142)	nfu1 (ENSLACG00000018250)	ENSLACG00000018260	GFPT1 (ENSLACG00000018296)	ANTXR1 (ENSLACG00000018390)	ZNF703 (ENSLACG00000018698)	DUSP26 (ENSLACG00000018721)	ENSLACG00000018725	MAK16 (ENSLACG00000018758)	TTI2 (ENSLACG00000018762)
Coelacanth	MODERN SPECIES	739														EXOSC9 (ENSLACG00000015203)	ANXA5 (ENSLACG00000014605) #19	QRFPR (ENSLACG00000014361) #22	TNIP3 (ENSLACG00000013229)	NDNF (ENSLACG00000012650)	PRDM5 (ENSLACG00000009187)	ENSLACG00000009136