Amniota	ANCESTRAL SPECIES	23	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050
Mammalia	ANCESTRAL SPECIES	64	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000162948	ENSGT00950000183036.b	ENSGT00940000159130	ENSGT00950000182975.a.b	ENSGT00550000075140
Theria	ANCESTRAL SPECIES	29	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000165052	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Eutheria	ANCESTRAL SPECIES	24	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Glires	ANCESTRAL SPECIES	21	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Eurasian red squirrel	MODERN SPECIES	7	HSH2D (ENSSVLG00005021858) #7	CIB3 (ENSSVLG00005021909) #8	FAM32A (ENSSVLG00005021993) #9	AP1M1 (ENSSVLG00005022090) #10	KLF2 (ENSSVLG00005022188) #11	EPS15L1 (ENSSVLG00005022241) #12	CALR3 (ENSSVLG00005022305) #13	C19orf44 (ENSSVLG00005022379) #14	CHERP (ENSSVLG00005022500) #15	SLC35E1 (ENSSVLG00005022541) #16	MED26 (ENSSVLG00005022596) #17	SMIM7 (ENSSVLG00005022628) #18	TMEM38A (ENSSVLG00005022680) #19	NWD1 (ENSSVLG00005022737) #20	SIN3B (ENSSVLG00005023096) #21	F2RL3 (ENSSVLG00005023189) #22	ENSSVLG00005023226 #23	ENSSVLG00005023298 #24	MYO9B (ENSSVLG00005023423) #25	USE1 (ENSSVLG00005023596) #26	OCEL1 (ENSSVLG00005023629) #27	NR2F6 (ENSSVLG00005023666) #28	USHBP1 (ENSSVLG00005023704) #29	BABAM1 (ENSSVLG00005023831) #30	ANKLE1 (ENSSVLG00005023936) #31	ABHD8 (ENSSVLG00005024083) #32	MRPL34 (ENSSVLG00005024100) #33	DDA1 (ENSSVLG00005024124) #34	ANO8 (ENSSVLG00005024146) #35	GTPBP3 (ENSSVLG00005024183) #36	PLVAP (ENSSVLG00005024254) #37
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Alpin marmot	MODERN SPECIES	360																ENSMMMG00000009818 #22
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Arctic ground squirrel	MODERN SPECIES	73	ENSUPAG00010021728 #7	CIB3 (ENSUPAG00010021724) #8	FAM32A (ENSUPAG00010021722) #9	AP1M1 (ENSUPAG00010021716) #10	KLF2 (ENSUPAG00010021714) #11	EPS15L1 (ENSUPAG00010021679) #12	CALR3 (ENSUPAG00010021675) #13	C19orf44 (ENSUPAG00010021668) #14	CHERP (ENSUPAG00010021662) #15	SLC35E1 (ENSUPAG00010021658) #16	MED26 (ENSUPAG00010021653) #17	ENSUPAG00010021646 #18	TMEM38A (ENSUPAG00010021641) #19	NWD1 (ENSUPAG00010021632) #20	SIN3B (ENSUPAG00010021629) #21	F2RL3 (ENSUPAG00010021628) #22	ENSUPAG00010021611 #23	HAUS8 (ENSUPAG00010021606) #24	MYO9B (ENSUPAG00010019621) #25	USE1 (ENSUPAG00010019584) #26	ENSUPAG00010019579 #27	NR2F6 (ENSUPAG00010019563) #28	USHBP1 (ENSUPAG00010019546) #29	BABAM1 (ENSUPAG00010019537) #30	ANKLE1 (ENSUPAG00010019507) #31	ABHD8 (ENSUPAG00010019500) #32	MRPL34 (ENSUPAG00010019490) #33	DDA1 (ENSUPAG00010019477) #34	ANO8 (ENSUPAG00010019468) #35	GTPBP3 (ENSUPAG00010019455) #36	PLVAP (ENSUPAG00010019443) #37
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000042939 #8	ENSHGLG00000003291 #9	AP1M1 (ENSHGLG00000041098) #10	ENSHGLG00000047567 #11	EPS15L1 (ENSHGLG00000005235) #12	ENSHGLG00000003381 #14	CHERP (ENSHGLG00000002993) #15	SLC35E1 (ENSHGLG00000002832) #16	MED26 (ENSHGLG00000003432) #17	SMIM7 (ENSHGLG00000042613) #18	TMEM38A (ENSHGLG00000037186) #19	ENSHGLG00000003523 #21	ENSHGLG00000032289 #21	ENSHGLG00000045689 #21	ENSHGLG00000034515 #21	F2RL3 (ENSHGLG00000033959) #22	HAUS8 (ENSHGLG00000041972) #24	USE1 (ENSHGLG00000031898) #26	OCEL1 (ENSHGLG00000049763) #27	ENSHGLG00000050133 #28	ENSHGLG00000049805	ENSHGLG00000005587 #29	BABAM1 (ENSHGLG00000003989) #30	ENSHGLG00000003677 #31	ENSHGLG00000038028	MRPL34 (ENSHGLG00000048306) #33	ENSHGLG00000050823	ENSHGLG00000045856	GTPBP3 (ENSHGLG00000002806) #36	ENSHGLG00000050162 #37	ENSHGLG00000044674
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Guinea pig	MODERN SPECIES	86	ENSCPOG00000031458	ENSCPOG00000030401	FAM32A (ENSCPOG00000036282) #9	AP1M1 (ENSCPOG00000003653) #10	ENSCPOG00000025120 #11	EPS15L1 (ENSCPOG00000010394) #12	CALR3 (ENSCPOG00000009145) #13	ENSCPOG00000021179 #14	CHERP (ENSCPOG00000019949) #15	SLC35E1 (ENSCPOG00000008975) #16	MED26 (ENSCPOG00000032983) #17	SMIM7 (ENSCPOG00000039863) #18	TMEM38A (ENSCPOG00000026018) #19	NWD1 (ENSCPOG00000024668) #20	SIN3B (ENSCPOG00000025963) #21	F2RL3 (ENSCPOG00000040487) #22	HAUS8 (ENSCPOG00000023189) #24	MYO9B (ENSCPOG00000022307) #25	USE1 (ENSCPOG00000024594) #26	ENSCPOG00000007032 #27	NR2F6 (ENSCPOG00000025861) #28	BABAM1 (ENSCPOG00000006927) #30	ANKLE1 (ENSCPOG00000006932) #31	ABHD8 (ENSCPOG00000006938) #32	MRPL34 (ENSCPOG00000038177) #33	DDA1 (ENSCPOG00000006944) #34	ANO8 (ENSCPOG00000006946) #35	GTPBP3 (ENSCPOG00000027093) #36	ENSCPOG00000006951 #37	CCDC194 (ENSCPOG00000036327)	MVB12A (ENSCPOG00000004492)
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT00940000157246	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Long-tailed chinchilla	MODERN SPECIES	231	TPM4 (ENSCLAG00000006213)	RAB8A (ENSCLAG00000006073)	HSH2D (ENSCLAG00000005020) #7	CIB3 (ENSCLAG00000004966) #8	FAM32A (ENSCLAG00000004833) #9	ENSCLAG00000004795 #10	EPS15L1 (ENSCLAG00000003824) #12	CALR3 (ENSCLAG00000003434) #13	ENSCLAG00000005950 #14	CHERP (ENSCLAG00000005484) #15	SLC35E1 (ENSCLAG00000005367) #16	MED26 (ENSCLAG00000005164) #17	TMEM38A (ENSCLAG00000004970) #19	NWD1 (ENSCLAG00000007464) #20	SIN3B (ENSCLAG00000006937) #21	F2RL3 (ENSCLAG00000006791) #22	MYO9B (ENSCLAG00000006247) #25	USE1 (ENSCLAG00000006857) #26	ENSCLAG00000006628 #27	USHBP1 (ENSCLAG00000006311) #29	BABAM1 (ENSCLAG00000006202) #30	ABHD8 (ENSCLAG00000008511) #32	MRPL34 (ENSCLAG00000008278) #33	DDA1 (ENSCLAG00000008060) #34	ANO8 (ENSCLAG00000008087) #35	PLVAP (ENSCLAG00000008012) #37	MVB12A (ENSCLAG00000007762)	ENSCLAG00000007691	NXNL1 (ENSCLAG00000007147)	SLC27A1 (ENSCLAG00000007064)	PGLS (ENSCLAG00000006976)
Degu	MODERN SPECIES	345	TPM4 (ENSODEG00000001342)	RAB8A (ENSODEG00000001241)	ENSODEG00000001251 #7	CIB3 (ENSODEG00000001268) #8	ENSODEG00000001275 #9	AP1M1 (ENSODEG00000001296) #10	EPS15L1 (ENSODEG00000001383) #12	ENSODEG00000001503 #13	CHERP (ENSODEG00000001528) #15	SLC35E1 (ENSODEG00000001560) #16	MED26 (ENSODEG00000001579) #17	SMIM7 (ENSODEG00000001606) #18	TMEM38A (ENSODEG00000001632) #19	NWD1 (ENSODEG00000001676) #20	SIN3B (ENSODEG00000001769) #21	F2RL3 (ENSODEG00000001898) #22	ENSODEG00000001912 #24	MYO9B (ENSODEG00000002010) #25	USE1 (ENSODEG00000002167) #26	ENSODEG00000002226 #27	NR2F6 (ENSODEG00000002243) #28	USHBP1 (ENSODEG00000001357) #29	BABAM1 (ENSODEG00000001401) #30	ANKLE1 (ENSODEG00000001442) #31	ABHD8 (ENSODEG00000001471) #32	MRPL34 (ENSODEG00000001492) #33	ENSODEG00000001501 #34	ANO8 (ENSODEG00000001546) #35	ENSODEG00000001637 #36	CCDC194 (ENSODEG00000001653)	ENSODEG00000001667
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Muroidea	ANCESTRAL SPECIES	47	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Chinese hamster chok1gshd	MODERN SPECIES	184	Hsh2d (ENSCGRG00001018531) #7	Cib3 (ENSCGRG00001004716) #8	Fam32a (ENSCGRG00001006672) #9	Ap1m1 (ENSCGRG00001008071) #10	Klf2 (ENSCGRG00001008944) #11	Eps15l1 (ENSCGRG00001014125) #12	Calr3 (ENSCGRG00001021544) #13	1700030K09Rik (ENSCGRG00001022027) #14	Cherp (ENSCGRG00001023316) #15	ENSCGRG00001003760 #16	Med26 (ENSCGRG00001005532) #17	Smim7 (ENSCGRG00001010544) #18	Tmem38a (ENSCGRG00001011988) #19	Nwd1 (ENSCGRG00001013606) #20	Sin3b (ENSCGRG00001018859) #21	F2rl3 (ENSCGRG00001019664) #22	Haus8 (ENSCGRG00001023903) #24	Myo9b (ENSCGRG00001006274) #25	Use1 (ENSCGRG00001000511) #26	Ocel1 (ENSCGRG00001017059) #27	Nr2f6 (ENSCGRG00001022405) #28	Ushbp1 (ENSCGRG00001008909) #29	Babam1 (ENSCGRG00001015012) #30	Ankle1 (ENSCGRG00001008327) #31	Abhd8 (ENSCGRG00001010324) #32	Mrpl34 (ENSCGRG00001014234) #33	ENSCGRG00001011162 #34	Ano8 (ENSCGRG00001012703) #35	Gtpbp3 (ENSCGRG00001000390) #36	Plvap (ENSCGRG00001013008) #37	Ccdc194 (ENSCGRG00001013325)
Golden Hamster	MODERN SPECIES	866	Hsh2d (ENSMAUG00000003927) #7	Cib3 (ENSMAUG00000008413) #8	Fam32a (ENSMAUG00000009102) #9	Ap1m1 (ENSMAUG00000009830) #10	Klf2 (ENSMAUG00000010080) #11	Eps15l1 (ENSMAUG00000010333) #12	Calr3 (ENSMAUG00000011954) #13	1700030K09Rik (ENSMAUG00000013843) #14	Cherp (ENSMAUG00000015856) #15	Slc35e1 (ENSMAUG00000004244) #16	Med26 (ENSMAUG00000010941) #17	Smim7 (ENSMAUG00000008259) #18	Tmem38a (ENSMAUG00000011812) #19	Nwd1 (ENSMAUG00000012768) #20	Sin3b (ENSMAUG00000009943) #21	F2rl3 (ENSMAUG00000015009) #22	Use1 (ENSMAUG00000001720) #26	Nr2f6 (ENSMAUG00000006855) #28	Ocel1 (ENSMAUG00000012743) #27	Ushbp1 (ENSMAUG00000001335) #29	Babam1 (ENSMAUG00000006043) #30	Ankle1 (ENSMAUG00000013355) #31
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	349	Mier2 (ENSMOCG00000008764)	Plpp2 (ENSMOCG00000008121)	Fam32a (ENSMOCG00000010252) #9	Ap1m1 (ENSMOCG00000013916) #10	Klf2 (ENSMOCG00000015332) #11	Eps15l1 (ENSMOCG00000019887) #12	Calr3 (ENSMOCG00000015755) #13	1700030K09Rik (ENSMOCG00000004691) #14	Cherp (ENSMOCG00000014697) #15	ENSMOCG00000000358 #16	Med26 (ENSMOCG00000005830) #17	ENSMOCG00000001914 #18	Tmem38a (ENSMOCG00000002946) #19	Nwd1 (ENSMOCG00000011227) #20	Sin3b (ENSMOCG00000000965) #21	ENSMOCG00000010660 #22	Haus8 (ENSMOCG00000014837) #24	Myo9b (ENSMOCG00000008008) #25	Use1 (ENSMOCG00000020518) #26	Ocel1 (ENSMOCG00000000245) #27	Nr2f6 (ENSMOCG00000009684) #28	Ushbp1 (ENSMOCG00000006551) #29	Babam1 (ENSMOCG00000012788) #30	ENSMOCG00000018731 #31	Ccdc88a (ENSMOCG00000014061)	Mtif2 (ENSMOCG00000012426)	ENSMOCG00000000716	Clhc1 (ENSMOCG00000016020)	ENSMOCG00000016183	Eml6 (ENSMOCG00000019298)	Sptbn1 (ENSMOCG00000008651)
Prairie vole	MODERN SPECIES	81	Scg5 (ENSMOCG00000012792)	Arhgap11a (ENSMOCG00000020456)	Gjd2 (ENSMOCG00000006516)	Actc1 (ENSMOCG00000021858)	Aqr (ENSMOCG00000001431)	Zfp770 (ENSMOCG00000010398)	Dph6 (ENSMOCG00000022193)	ENSMOCG00000008755	ENSMOCG00000002125	Cdin1 (ENSMOCG00000018908)	Meis2 (ENSMOCG00000000773)	Tmco5 (ENSMOCG00000018522)	Spred1 (ENSMOCG00000022559)	Fam98b (ENSMOCG00000019785)	Rasgrp1 (ENSMOCG00000020893)	ENSMOCG00000001025 #22	Ptprj (ENSMOCG00000020009)	Nup160 (ENSMOCG00000015911)	Fnbp4 (ENSMOCG00000016333)	Agbl2 (ENSMOCG00000015547)	Mtch2 (ENSMOCG00000001577)	C1qtnf4 (ENSMOCG00000013500)	Ndufs3 (ENSMOCG00000009375)	Kbtbd4 (ENSMOCG00000021780)	Ptpmt1 (ENSMOCG00000018913)	Celf1 (ENSMOCG00000012633)	Rapsn (ENSMOCG00000012267)	Psmc3 (ENSMOCG00000001464)	ENSMOCG00000006097	ENSMOCG00000008195	Spi1 (ENSMOCG00000006114)
Northern American deer mouse	MODERN SPECIES	8	Hsh2d (ENSPEMG00000023449) #7	Cib3 (ENSPEMG00000008205) #8	Fam32a (ENSPEMG00000029420) #9	Ap1m1 (ENSPEMG00000023037) #10	Klf2 (ENSPEMG00000009733) #11	Eps15l1 (ENSPEMG00000023577) #12	Calr3 (ENSPEMG00000023150) #13	1700030K09Rik (ENSPEMG00000000757) #14	Cherp (ENSPEMG00000011238) #15	Slc35e1 (ENSPEMG00000027717) #16	ENSPEMG00000004236 #17	Smim7 (ENSPEMG00000023935) #18	Tmem38a (ENSPEMG00000011307) #19	Nwd1 (ENSPEMG00000023600) #20	Sin3b (ENSPEMG00000001072) #21	F2rl3 (ENSPEMG00000007402) #22	Haus8 (ENSPEMG00000007127) #24	Myo9b (ENSPEMG00000017128) #25	Use1 (ENSPEMG00000011298) #26	Ocel1 (ENSPEMG00000018587) #27	Nr2f6 (ENSPEMG00000000387) #28	Ushbp1 (ENSPEMG00000001924) #29	Babam1 (ENSPEMG00000014505) #30	Ankle1 (ENSPEMG00000019042) #31	ENSPEMG00000026982	Abhd8 (ENSPEMG00000010266) #32	Mrpl34 (ENSPEMG00000029638) #33	Dda1 (ENSPEMG00000026278) #34	Ano8 (ENSPEMG00000010814) #35	Gtpbp3 (ENSPEMG00000011836) #36	Plvap (ENSPEMG00000012586) #37
Murinae	ANCESTRAL SPECIES	42	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22
Mus	ANCESTRAL SPECIES	6	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Mouse	MODERN SPECIES	17	Cib3 (ENSMUSG00000074240) #8	Fam32a (ENSMUSG00000003039) #9	Ap1m1 (ENSMUSG00000003033) #10	Hmgn2-ps (ENSMUSG00000070713)	Klf2 (ENSMUSG00000055148) #11	Eps15l1 (ENSMUSG00000006276) #12	Calr3 (ENSMUSG00000019732) #13	1700030K09Rik (ENSMUSG00000052794) #14	Cherp (ENSMUSG00000052488) #15	Slc35e1 (ENSMUSG00000019731) #16	Med26 (ENSMUSG00000045248) #17	Smim7 (ENSMUSG00000044600) #18	Tmem38a (ENSMUSG00000031791) #19	Nwd1 (ENSMUSG00000048148) #20	Sin3b (ENSMUSG00000031622) #21	F2rl3 (ENSMUSG00000050147) #22	Large1 (ENSMUSG00000004383)	Isx (ENSMUSG00000031621)	Hmgxb4 (ENSMUSG00000034518)	Tom1 (ENSMUSG00000042870)	Hmox1 (ENSMUSG00000005413)	Mcm5 (ENSMUSG00000005410)	Rasd2 (ENSMUSG00000034472)	Gm10358 (ENSMUSG00000110469)	Iqcm (ENSMUSG00000031620)	Nr3c2 (ENSMUSG00000031618)	Arhgap10 (ENSMUSG00000037148)	Prmt9 (ENSMUSG00000037134)	Tmem184c (ENSMUSG00000031617)	Ednra (ENSMUSG00000031616)	Ttc29 (ENSMUSG00000037101)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000158497	ENSGT00940000161702	ENSGT00390000012436	ENSGT00940000156865	ENSGT00390000017673.b	ENSGT01050000244824.G	ENSGT00940000161129	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000158472	ENSGT00940000155201	ENSGT01100000263512.a.a.b	ENSGT00390000008611	ENSGT00940000160339
Steppe mouse	MODERN SPECIES	2610														Nwd1 (ENSMSIG00000026898) #20	Sin3b (ENSMSIG00000026848) #21	F2rl3 (ENSMSIG00000026840) #22	Large1 (ENSMSIG00000026806)	ENSMSIG00000026797
spretus	MODERN SPECIES	17	Cib3 (MGP_SPRETEiJ_G0032333) #8	Fam32a (MGP_SPRETEiJ_G0032334) #9	Ap1m1 (MGP_SPRETEiJ_G0032335) #10	Klf2 (MGP_SPRETEiJ_G0032336) #11	Eps15l1 (MGP_SPRETEiJ_G0032337) #12	2310002L09Rik (MGP_SPRETEiJ_G0032338)	Calr3 (MGP_SPRETEiJ_G0032339) #13	1700030K09Rik (MGP_SPRETEiJ_G0032340) #14	Cherp (MGP_SPRETEiJ_G0032341) #15	Slc35e1 (MGP_SPRETEiJ_G0032342) #16	Med26 (MGP_SPRETEiJ_G0032343) #17	Smim7 (MGP_SPRETEiJ_G0032344) #18	Tmem38a (MGP_SPRETEiJ_G0032345) #19	Nwd1 (MGP_SPRETEiJ_G0032346) #20	Sin3b (MGP_SPRETEiJ_G0032347) #21	F2rl3 (MGP_SPRETEiJ_G0032348) #22	Large1 (MGP_SPRETEiJ_G0032349)	Isx (MGP_SPRETEiJ_G0032350)	Hmgxb4 (MGP_SPRETEiJ_G0032351)	Tom1 (MGP_SPRETEiJ_G0032352)	Hmox1 (MGP_SPRETEiJ_G0032353)	Mcm5 (MGP_SPRETEiJ_G0032354)	Rasd2 (MGP_SPRETEiJ_G0032355)	Iqcm (MGP_SPRETEiJ_G0032356)	Nr3c2 (MGP_SPRETEiJ_G0032357)	Arhgap10 (MGP_SPRETEiJ_G0032358)	Prmt9 (MGP_SPRETEiJ_G0032359)	Tmem184c (MGP_SPRETEiJ_G0032360)	Ednra (MGP_SPRETEiJ_G0032361)	Ttc29 (MGP_SPRETEiJ_G0032362)	Pou4f2 (MGP_SPRETEiJ_G0032363)
Ryukyu mouse	MODERN SPECIES	17	Hsh2d (MGP_CAROLIEiJ_G0031212) #7	Cib3 (MGP_CAROLIEiJ_G0031213) #8	Fam32a (MGP_CAROLIEiJ_G0031214) #9	Ap1m1 (MGP_CAROLIEiJ_G0031215) #10	Klf2 (MGP_CAROLIEiJ_G0031216) #11	Eps15l1 (MGP_CAROLIEiJ_G0031217) #12	Calr3 (MGP_CAROLIEiJ_G0031218) #13	1700030K09Rik (MGP_CAROLIEiJ_G0031219) #14	Cherp (MGP_CAROLIEiJ_G0031220) #15	Slc35e1 (MGP_CAROLIEiJ_G0031221) #16	Med26 (MGP_CAROLIEiJ_G0031222) #17	Smim7 (MGP_CAROLIEiJ_G0031223) #18	Tmem38a (MGP_CAROLIEiJ_G0031224) #19	Nwd1 (MGP_CAROLIEiJ_G0031225) #20	Sin3b (MGP_CAROLIEiJ_G0031226) #21	F2rl3 (MGP_CAROLIEiJ_G0031227) #22	Large1 (MGP_CAROLIEiJ_G0031228)	Isx (MGP_CAROLIEiJ_G0031229)	MGP_CAROLIEiJ_G0031230	Tom1 (MGP_CAROLIEiJ_G0031231)	Hmox1 (MGP_CAROLIEiJ_G0031232)	Mcm5 (MGP_CAROLIEiJ_G0031233)	Rasd2 (MGP_CAROLIEiJ_G0031234)	Iqcm (MGP_CAROLIEiJ_G0031235)	Nr3c2 (MGP_CAROLIEiJ_G0031236)	Arhgap10 (MGP_CAROLIEiJ_G0031237)	Prmt9 (MGP_CAROLIEiJ_G0031238)	Tmem184c (MGP_CAROLIEiJ_G0031239)	Ednra (MGP_CAROLIEiJ_G0031240)	Ttc29 (MGP_CAROLIEiJ_G0031241)	Pou4f2 (MGP_CAROLIEiJ_G0031242)
Shrew mouse	MODERN SPECIES	10	Hsh2d (MGP_PahariEiJ_G0021677) #7	Cib3 (MGP_PahariEiJ_G0021678) #8	Fam32a (MGP_PahariEiJ_G0021679) #9	Ap1m1 (MGP_PahariEiJ_G0021680) #10	Klf2 (MGP_PahariEiJ_G0021681) #11	Eps15l1 (MGP_PahariEiJ_G0021682) #12	Calr3 (MGP_PahariEiJ_G0021683) #13	1700030K09Rik (MGP_PahariEiJ_G0021684) #14	Cherp (MGP_PahariEiJ_G0021685) #15	Slc35e1 (MGP_PahariEiJ_G0021686) #16	Med26 (MGP_PahariEiJ_G0021687) #17	Smim7 (MGP_PahariEiJ_G0021688) #18	Tmem38a (MGP_PahariEiJ_G0021689) #19	Nwd1 (MGP_PahariEiJ_G0021690) #20	Sin3b (MGP_PahariEiJ_G0021691) #21	F2rl3 (MGP_PahariEiJ_G0021692) #22	Large1 (MGP_PahariEiJ_G0021693)	Isx (MGP_PahariEiJ_G0021694)	Hmgxb4 (MGP_PahariEiJ_G0021695)	Tom1 (MGP_PahariEiJ_G0021696)	Hmox1 (MGP_PahariEiJ_G0021697)	Mcm5 (MGP_PahariEiJ_G0021698)	Rasd2 (MGP_PahariEiJ_G0021699)
Rat	MODERN SPECIES	7	Hsh2d (ENSRNOG00000023614) #7	Cib3 (ENSRNOG00000014600) #8	Fam32a (ENSRNOG00000066630) #9	Ap1m1 (ENSRNOG00000014454) #10	Klf2 (ENSRNOG00000067705) #11	Eps15l1 (ENSRNOG00000013502) #12	Calr3 (ENSRNOG00000013260) #13	C16h19orf44 (ENSRNOG00000023700) #14	Cherp (ENSRNOG00000012323) #15	Slc35e1 (ENSRNOG00000012287) #16	Med26 (ENSRNOG00000012270) #17	Smim7 (ENSRNOG00000042037) #18	Tmem38a (ENSRNOG00000011912) #19	Nwd1 (ENSRNOG00000052129) #20	Sin3b (ENSRNOG00000048622) #21	F2rl3 (ENSRNOG00000068093) #22	Sftpd (ENSRNOG00000056001)	Mbl1 (ENSRNOG00000011706)	Sftpa1 (ENSRNOG00000011438)	Mat1a (ENSRNOG00000011351)	Dydc1 (ENSRNOG00000011165)	Dydc2 (ENSRNOG00000039591)	Prxl2a (ENSRNOG00000011140)	Tspan14 (ENSRNOG00000010813)	Sh2d4b (ENSRNOG00000042623)	LOC100363321 (ENSRNOG00000062821)	ENSRNOG00000065936	RGD1564958 (ENSRNOG00000028958)	Nrg3 (ENSRNOG00000063450)	EloaA2l1 (ENSRNOG00000063161)	Eloa-ps1 (ENSRNOG00000067535)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Cib3 (ENSNGAG00000004267) #8	Fam32a (ENSNGAG00000021828) #9	Ap1m1 (ENSNGAG00000022674) #10	Klf2 (ENSNGAG00000022236) #11	Eps15l1 (ENSNGAG00000003492) #12	Calr3 (ENSNGAG00000022659) #13	1700030K09Rik (ENSNGAG00000022589) #14	Cherp (ENSNGAG00000023323) #15	Slc35e1 (ENSNGAG00000021910) #16	Med26 (ENSNGAG00000013875) #17	Smim7 (ENSNGAG00000019358) #18	Tmem38a (ENSNGAG00000016799) #19	Nwd1 (ENSNGAG00000016596) #20	ENSNGAG00000022598	Sin3b (ENSNGAG00000023179) #21	F2rl3 (ENSNGAG00000022079) #22	Haus8 (ENSNGAG00000024287) #24	Myo9b (ENSNGAG00000019200) #25	Use1 (ENSNGAG00000011677) #26	Ocel1 (ENSNGAG00000012935) #27	Nr2f6 (ENSNGAG00000021444) #28	Ushbp1 (ENSNGAG00000002250) #29	Babam1 (ENSNGAG00000022383) #30	Abhd8 (ENSNGAG00000022805) #32	Mrpl34 (ENSNGAG00000018101) #33	ENSNGAG00000009898 #34	Ano8 (ENSNGAG00000015730) #35	Gtpbp3 (ENSNGAG00000017920) #36	Ccdc194 (ENSNGAG00000012696)	Mvb12a (ENSNGAG00000023447)	Tmem221 (ENSNGAG00000020235)
Lesser Egyptian jerboa	MODERN SPECIES	127	Rab8a (ENSJJAG00000021959)	ENSJJAG00000018938	Fam32a (ENSJJAG00000022461) #9	Ap1m1 (ENSJJAG00000003963) #10	Klf2 (ENSJJAG00000019814) #11	Eps15l1 (ENSJJAG00000001243) #12	ENSJJAG00000008721	ENSJJAG00000012853	Calr3 (ENSJJAG00000019732) #13	Cherp (ENSJJAG00000017982) #15	Slc35e1 (ENSJJAG00000014718) #16	Med26 (ENSJJAG00000020010) #17	Smim7 (ENSJJAG00000000221) #18	Tmem38a (ENSJJAG00000013265) #19	Nwd1 (ENSJJAG00000017294) #20	F2rl3 (ENSJJAG00000008663) #22	Haus8 (ENSJJAG00000016878) #24	Myo9b (ENSJJAG00000020924) #25	Use1 (ENSJJAG00000010584) #26	Nr2f6 (ENSJJAG00000010143) #28	Ushbp1 (ENSJJAG00000012065) #29	Ankle1 (ENSJJAG00000014888) #31	Abhd8 (ENSJJAG00000010342) #32	Mrpl34 (ENSJJAG00000018808) #33	Dda1 (ENSJJAG00000021059) #34	Ano8 (ENSJJAG00000011527) #35	Plvap (ENSJJAG00000000206) #37	Ccdc194 (ENSJJAG00000013119)	Mvb12a (ENSJJAG00000019047)	Atp13a1 (ENSJJAG00000010806)	Gmip (ENSJJAG00000013017)
Primates	ANCESTRAL SPECIES	18	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259.f #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259.f #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Lemuriformes_a	ANCESTRAL SPECIES	185	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259.f #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23
Coquerels sifaka	MODERN SPECIES	985										SLC35E1 (ENSPCOG00000018470) #16	MED26 (ENSPCOG00000022724) #17	SMIM7 (ENSPCOG00000017858) #18	TMEM38A (ENSPCOG00000005912) #19	NWD1 (ENSPCOG00000024527) #20	SIN3B (ENSPCOG00000008105) #21	F2RL3 (ENSPCOG00000020050) #22	CPAMD8 (ENSPCOG00000016554) #23	ENSPCOG00000021807 #32
Greater bamboo lemur	MODERN SPECIES	1122															SIN3B (ENSPSMG00000016105) #21	F2RL3 (ENSPSMG00000016072) #22
Mouse lemur	MODERN SPECIES	16	MRI1 (ENSMICG00000031875)	CIB3 (ENSMICG00000013968) #8	FAM32A (ENSMICG00000048134) #9	AP1M1 (ENSMICG00000013728) #10	KLF2 (ENSMICG00000035322) #11	EPS15L1 (ENSMICG00000004549) #12	CALR3 (ENSMICG00000026331) #13	C19orf44 (ENSMICG00000004564) #14	CHERP (ENSMICG00000004577) #15	SLC35E1 (ENSMICG00000004587) #16	MED26 (ENSMICG00000030425) #17	SMIM7 (ENSMICG00000047863) #18	TMEM38A (ENSMICG00000044609) #19	NWD1 (ENSMICG00000003445) #20	SIN3B (ENSMICG00000003468) #21	F2RL3 (ENSMICG00000027121) #22	ENSMICG00000000327 #23	ENSMICG00000042907 #24	ENSMICG00000014240	ZNF333 (ENSMICG00000029549)	ADGRE3 (ENSMICG00000011089)	CLEC17A (ENSMICG00000011080)	NDUFB7 (ENSMICG00000043903)	TECR (ENSMICG00000009818)	DNAJB1 (ENSMICG00000047161)	GIPC1 (ENSMICG00000004336)	PTGER1 (ENSMICG00000045048)	PKN1 (ENSMICG00000035009)	DDX39A (ENSMICG00000015325)	ENSMICG00000046227	ENSMICG00000032629
Bushbaby	MODERN SPECIES	220	HSH2D (ENSOGAG00000011948) #7	CIB3 (ENSOGAG00000026348) #8	ENSOGAG00000027763 #9	AP1M1 (ENSOGAG00000016047) #10	KLF2 (ENSOGAG00000030297) #11	EPS15L1 (ENSOGAG00000008456) #12	CALR3 (ENSOGAG00000005827) #13	C19orf44 (ENSOGAG00000005830) #14	CHERP (ENSOGAG00000005834) #15	SLC35E1 (ENSOGAG00000005840) #16	MED26 (ENSOGAG00000034820) #17	SMIM7 (ENSOGAG00000032634) #18	TMEM38A (ENSOGAG00000005846) #19	NWD1 (ENSOGAG00000006070) #20	SIN3B (ENSOGAG00000006074) #21	F2RL3 (ENSOGAG00000028611) #22	ENSOGAG00000031673	HAUS8 (ENSOGAG00000034468) #24	MYO9B (ENSOGAG00000008379) #25	NR2F6 (ENSOGAG00000030281) #28	USHBP1 (ENSOGAG00000008395) #29	BABAM1 (ENSOGAG00000008400) #30	ANKLE1 (ENSOGAG00000008404) #31	ABHD8 (ENSOGAG00000007003) #32	MRPL34 (ENSOGAG00000028616) #33	DDA1 (ENSOGAG00000003701) #34	ANO8 (ENSOGAG00000007006) #35	GTPBP3 (ENSOGAG00000007014) #36	PLVAP (ENSOGAG00000032556) #37	MVB12A (ENSOGAG00000030761)	ENSOGAG00000027569
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560.h #21	ENSGT00940000159560.g #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00910000147815	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560.g #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00910000147815	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Marmoset	MODERN SPECIES	14	FAM32A (ENSCJAG00000014097) #9	AP1M1 (ENSCJAG00000014070) #10	KLF2 (ENSCJAG00000045561) #11	EPS15L1 (ENSCJAG00000013985) #12	CALR3 (ENSCJAG00000013978) #13	C19orf44 (ENSCJAG00000013966) #14	CHERP (ENSCJAG00000040462) #15	SLC35E1 (ENSCJAG00000013952) #16	MED26 (ENSCJAG00000013939) #17	ENSCJAG00000083081	SMIM7 (ENSCJAG00000013936) #18	TMEM38A (ENSCJAG00000013929) #19	ENSCJAG00000073817	NWD1 (ENSCJAG00000009420) #20	ENSCJAG00000016111 #21	F2RL3 (ENSCJAG00000009441) #22	CPAMD8 (ENSCJAG00000009438) #23	HAUS8 (ENSCJAG00000009466) #24	MYO9B (ENSCJAG00000009486) #25	USE1 (ENSCJAG00000009547) #26	OCEL1 (ENSCJAG00000009584) #27	NR2F6 (ENSCJAG00000009593) #28	USHBP1 (ENSCJAG00000009614) #29	BABAM1 (ENSCJAG00000009641) #30	ANKLE1 (ENSCJAG00000009656) #31	ABHD8 (ENSCJAG00000009699) #32	MRPL34 (ENSCJAG00000080819) #33	DDA1 (ENSCJAG00000070855) #34	ANO8 (ENSCJAG00000040310) #35	GTPBP3 (ENSCJAG00000009731) #36	PLVAP (ENSCJAG00000009753) #37
Cebidae_a	ANCESTRAL SPECIES	48	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560.g #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00910000147815	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Capuchin	MODERN SPECIES	280	CIB3 (ENSCCAG00000036781) #8	FAM32A (ENSCCAG00000030893) #9	AP1M1 (ENSCCAG00000024452) #10	KLF2 (ENSCCAG00000026117) #11	EPS15L1 (ENSCCAG00000035378) #12	ENSCCAG00000033129	CALR3 (ENSCCAG00000029775) #13	C19orf44 (ENSCCAG00000026019) #14	CHERP (ENSCCAG00000031534) #15	SLC35E1 (ENSCCAG00000031022) #16	MED26 (ENSCCAG00000037166) #17	SMIM7 (ENSCCAG00000022178) #18	TMEM38A (ENSCCAG00000028253) #19	NWD1 (ENSCCAG00000033354) #20	SIN3B (ENSCCAG00000021888) #21	F2RL3 (ENSCCAG00000033855) #22	CPAMD8 (ENSCCAG00000032959) #23	HAUS8 (ENSCCAG00000037405) #24	MYO9B (ENSCCAG00000024486) #25	USE1 (ENSCCAG00000023138) #26	OCEL1 (ENSCCAG00000037726) #27	NR2F6 (ENSCCAG00000037017) #28	USHBP1 (ENSCCAG00000020469) #29	BABAM1 (ENSCCAG00000037060) #30	ANKLE1 (ENSCCAG00000019658) #31	ABHD8 (ENSCCAG00000026840) #32	ENSCCAG00000031745 #33	DDA1 (ENSCCAG00000033180) #34	ENSCCAG00000006071	ANO8 (ENSCCAG00000036445) #35	GTPBP3 (ENSCCAG00000020717) #36
Bolivian squirrel monkey	MODERN SPECIES	199	RAB8A (ENSSBOG00000023878)	ENSSBOG00000027887 #7	FAM32A (ENSSBOG00000035347) #9	AP1M1 (ENSSBOG00000029089) #10	ENSSBOG00000027797 #11	EPS15L1 (ENSSBOG00000026422) #12	ENSSBOG00000036135	CALR3 (ENSSBOG00000029074) #13	CHERP (ENSSBOG00000014492) #15	MED26 (ENSSBOG00000024207) #17	ENSSBOG00000032742	SMIM7 (ENSSBOG00000031649) #18	TMEM38A (ENSSBOG00000026791) #19	NWD1 (ENSSBOG00000030232) #20	SIN3B (ENSSBOG00000025410) #21	F2RL3 (ENSSBOG00000002537) #22	CPAMD8 (ENSSBOG00000024896) #23	ENSSBOG00000032294	MYO9B (ENSSBOG00000022491) #25	USE1 (ENSSBOG00000001119) #26	ENSSBOG00000030595 #27	NR2F6 (ENSSBOG00000020786) #28	USHBP1 (ENSSBOG00000021521) #29	BABAM1 (ENSSBOG00000031624) #30	ANKLE1 (ENSSBOG00000017922) #31	ENSSBOG00000031590 #33	ABHD8 (ENSSBOG00000022994) #32	DDA1 (ENSSBOG00000031583) #34	ANO8 (ENSSBOG00000027174) #35	GTPBP3 (ENSSBOG00000003356) #36	PLVAP (ENSSBOG00000025435) #37
Mas night monkey	MODERN SPECIES	1353																F2RL3 (ENSANAG00000034700) #22	CPAMD8 (ENSANAG00000026184) #23	ENSANAG00000030558 #24	MYO9B (ENSANAG00000021391) #25	USE1 (ENSANAG00000025433) #26	OCEL1 (ENSANAG00000019326) #27	NR2F6 (ENSANAG00000027639) #28	USHBP1 (ENSANAG00000022166) #29	BABAM1 (ENSANAG00000028377) #30	ANKLE1 (ENSANAG00000037759) #31	ENSANAG00000020983 #33	ABHD8 (ENSANAG00000022324) #32	DDA1 (ENSANAG00000031171) #34	ENSANAG00000036309	ANO8 (ENSANAG00000021655) #35	GTPBP3 (ENSANAG00000030487) #36
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Hominidae	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Pan	ANCESTRAL SPECIES	14	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399.c #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748.g #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Chimpanzee	MODERN SPECIES	10	HSH2D (ENSPTRG00000023880) #7	CIB3 (ENSPTRG00000010640) #8	FAM32A (ENSPTRG00000010641) #9	AP1M1 (ENSPTRG00000010642) #10	KLF2 (ENSPTRG00000010643) #11	EPS15L1 (ENSPTRG00000010644) #12	CALR3 (ENSPTRG00000010645) #13	C19H19orf44 (ENSPTRG00000010646) #14	CHERP (ENSPTRG00000010647) #15	SLC35E1 (ENSPTRG00000010648) #16	MED26 (ENSPTRG00000010649) #17	SMIM7 (ENSPTRG00000010650) #18	TMEM38A (ENSPTRG00000010651) #19	NWD1 (ENSPTRG00000010653) #20	SIN3B (ENSPTRG00000010654) #21	F2RL3 (ENSPTRG00000029092) #22	ENSPTRG00000050719 #23	HAUS8 (ENSPTRG00000010657) #24	MYO9B (ENSPTRG00000010658) #25	ENSPTRG00000050535 #26	USE1 (ENSPTRG00000010659) #26	ENSPTRG00000045673	OCEL1 (ENSPTRG00000010660) #27	NR2F6 (ENSPTRG00000010661) #28	BABAM1 (ENSPTRG00000010664) #30	ANKLE1 (ENSPTRG00000010665) #31	ABHD8 (ENSPTRG00000010666) #32	MRPL34 (ENSPTRG00000029090) #33	DDA1 (ENSPTRG00000043860) #34	ANO8 (ENSPTRG00000010669) #35	GTPBP3 (ENSPTRG00000010670) #36
Bonobo	MODERN SPECIES	10	HSH2D (ENSPPAG00000031940) #7	CIB3 (ENSPPAG00000041194) #8	FAM32A (ENSPPAG00000025422) #9	AP1M1 (ENSPPAG00000041870) #10	ENSPPAG00000028173	EPS15L1 (ENSPPAG00000043633) #12	CALR3 (ENSPPAG00000039726) #13	C19orf44 (ENSPPAG00000029222) #14	CHERP (ENSPPAG00000029195) #15	SLC35E1 (ENSPPAG00000026424) #16	MED26 (ENSPPAG00000033523) #17	ENSPPAG00000037541 #18	TMEM38A (ENSPPAG00000005460) #19	NWD1 (ENSPPAG00000032301) #20	SIN3B (ENSPPAG00000043909) #21	F2RL3 (ENSPPAG00000030821) #22	ENSPPAG00000037601 #23	HAUS8 (ENSPPAG00000039288) #24	MYO9B (ENSPPAG00000033794) #25	USE1 (ENSPPAG00000028209) #26	OCEL1 (ENSPPAG00000031905) #27	ENSPPAG00000027181 #28	USHBP1 (ENSPPAG00000039818) #29	BABAM1 (ENSPPAG00000029830) #30	ANKLE1 (ENSPPAG00000037684) #31	ABHD8 (ENSPPAG00000006875) #32	MRPL34 (ENSPPAG00000032716) #33	DDA1 (ENSPPAG00000041026) #34	ANO8 (ENSPPAG00000033991) #35	GTPBP3 (ENSPPAG00000027605) #36	PLVAP (ENSPPAG00000027257) #37
Human	MODERN SPECIES	10	CIB3 (ENSG00000141977) #8	FAM32A (ENSG00000105058) #9	AP1M1 (ENSG00000072958) #10	KLF2 (ENSG00000127528) #11	EPS15L1 (ENSG00000127527) #12	CALR3 (ENSG00000269058) #13	C19orf44 (ENSG00000105072) #14	CHERP (ENSG00000085872) #15	SLC35E1 (ENSG00000127526) #16	MED26 (ENSG00000105085) #17	ENSG00000268790	SMIM7 (ENSG00000214046) #18	TMEM38A (ENSG00000072954) #19	NWD1 (ENSG00000188039) #20	SIN3B (ENSG00000127511) #21	F2RL3 (ENSG00000127533) #22	CPAMD8 (ENSG00000160111) #23	HAUS8 (ENSG00000131351) #24	MYO9B (ENSG00000099331) #25	USE1 (ENSG00000053501) #26	OCEL1 (ENSG00000099330) #27	NR2F6 (ENSG00000160113) #28	ENSG00000269095	USHBP1 (ENSG00000130307) #29	BABAM1 (ENSG00000105393) #30	ANKLE1 (ENSG00000160117) #31	ABHD8 (ENSG00000127220) #32	MRPL34 (ENSG00000130312) #33	DDA1 (ENSG00000130311) #34	ANO8 (ENSG00000074855) #35	GTPBP3 (ENSG00000130299) #36
Gorilla	MODERN SPECIES	10	RAB8A (ENSGGOG00000015236)	HSH2D (ENSGGOG00000000044) #7	CIB3 (ENSGGOG00000004340) #8	FAM32A (ENSGGOG00000022418) #9	AP1M1 (ENSGGOG00000004343) #10	EPS15L1 (ENSGGOG00000013623) #12	CALR3 (ENSGGOG00000022144) #13	C19orf44 (ENSGGOG00000016339) #14	CHERP (ENSGGOG00000016348) #15	SLC35E1 (ENSGGOG00000016361) #16	MED26 (ENSGGOG00000016370) #17	ENSGGOG00000040518 #18	TMEM38A (ENSGGOG00000008175) #19	NWD1 (ENSGGOG00000016341) #20	SIN3B (ENSGGOG00000009520) #21	F2RL3 (ENSGGOG00000007746) #22	CPAMD8 (ENSGGOG00000041886) #23	HAUS8 (ENSGGOG00000009382) #24	MYO9B (ENSGGOG00000009393) #25	USE1 (ENSGGOG00000009410) #26	OCEL1 (ENSGGOG00000010983) #27	USHBP1 (ENSGGOG00000005773) #29	BABAM1 (ENSGGOG00000005781) #30	ANKLE1 (ENSGGOG00000005788) #31	ABHD8 (ENSGGOG00000005794) #32	ENSGGOG00000005799 #33	ENSGGOG00000038573 #34	ENSGGOG00000022333 #35	GTPBP3 (ENSGGOG00000015580) #36	PLVAP (ENSGGOG00000006691) #37	CCDC194 (ENSGGOG00000043328)
Orangutan	MODERN SPECIES	10	HSH2D (ENSPPYG00000009683) #7	CIB3 (ENSPPYG00000009684) #8	FAM32A (ENSPPYG00000036075) #9	AP1M1 (ENSPPYG00000009686) #10	KLF2 (ENSPPYG00000009687) #11	EPS15L1 (ENSPPYG00000009688) #12	CALR3 (ENSPPYG00000009689) #13	C19orf44 (ENSPPYG00000009690) #14	CHERP (ENSPPYG00000009691) #15	SLC35E1 (ENSPPYG00000009692) #16	MED26 (ENSPPYG00000040195) #17	ENSPPYG00000009694 #18	TMEM38A (ENSPPYG00000009695) #19	NWD1 (ENSPPYG00000009696) #20	SIN3B (ENSPPYG00000009697) #21	F2RL3 (ENSPPYG00000009698) #22	CPAMD8 (ENSPPYG00000009699) #23	HAUS8 (ENSPPYG00000009700) #24	MYO9B (ENSPPYG00000009701) #25	USE1 (ENSPPYG00000009702) #26	OCEL1 (ENSPPYG00000029502) #27	NR2F6 (ENSPPYG00000009703) #28	USHBP1 (ENSPPYG00000009704) #29	BABAM1 (ENSPPYG00000009705) #30	ANKLE1 (ENSPPYG00000009706) #31	ABHD8 (ENSPPYG00000009707) #32	ENSPPYG00000031398 #34	ANO8 (ENSPPYG00000009708) #35	GTPBP3 (ENSPPYG00000009711) #36	PLVAP (ENSPPYG00000009712) #37	CCDC194 (ENSPPYG00000035415)
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Vervet Monkey	MODERN SPECIES	25	RAB8A (ENSCSAG00000005783)	HSH2D (ENSCSAG00000005778) #7	CIB3 (ENSCSAG00000005772) #8	FAM32A (ENSCSAG00000005769) #9	AP1M1 (ENSCSAG00000005766) #10	KLF2 (ENSCSAG00000005764) #11	EPS15L1 (ENSCSAG00000005759) #12	CALR3 (ENSCSAG00000005752) #13	C19orf44 (ENSCSAG00000005750) #14	CHERP (ENSCSAG00000005740) #15	SLC35E1 (ENSCSAG00000005715) #16	MED26 (ENSCSAG00000005707) #17	TMEM38A (ENSCSAG00000005703) #19	NWD1 (ENSCSAG00000005700) #20	SIN3B (ENSCSAG00000005690) #21	F2RL3 (ENSCSAG00000005687) #22	CPAMD8 (ENSCSAG00000005682) #23	HAUS8 (ENSCSAG00000005673) #24	MYO9B (ENSCSAG00000005666) #25	USE1 (ENSCSAG00000005659) #26	OCEL1 (ENSCSAG00000005652) #27	NR2F6 (ENSCSAG00000005651) #28	USHBP1 (ENSCSAG00000005650) #29	BABAM1 (ENSCSAG00000005645) #30	ANKLE1 (ENSCSAG00000005640) #31	ABHD8 (ENSCSAG00000005631) #32	MRPL34 (ENSCSAG00000005626) #33	DDA1 (ENSCSAG00000005624) #34	ANO8 (ENSCSAG00000005616) #35	PLVAP (ENSCSAG00000005605) #37	BST2 (ENSCSAG00000005601)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361.h #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Pig-tailed macaque	MODERN SPECIES	76	CIB3 (ENSMNEG00000045252) #8	FAM32A (ENSMNEG00000031002) #9	AP1M1 (ENSMNEG00000014458) #10	KLF2 (ENSMNEG00000032490) #11	EPS15L1 (ENSMNEG00000033557) #12	CALR3 (ENSMNEG00000005210) #13	C19orf44 (ENSMNEG00000042005) #14	CHERP (ENSMNEG00000004125) #15	SLC35E1 (ENSMNEG00000041471) #16	MED26 (ENSMNEG00000043812) #17	ENSMNEG00000007348	ENSMNEG00000042136	TMEM38A (ENSMNEG00000044076) #19	NWD1 (ENSMNEG00000029893) #20	SIN3B (ENSMNEG00000031515) #21	F2RL3 (ENSMNEG00000031285) #22	CPAMD8 (ENSMNEG00000040985) #23	HAUS8 (ENSMNEG00000029611) #24	MYO9B (ENSMNEG00000044725) #25	USE1 (ENSMNEG00000044794) #26	ENSMNEG00000039761	OCEL1 (ENSMNEG00000042854) #27	NR2F6 (ENSMNEG00000038742) #28	USHBP1 (ENSMNEG00000014070) #29	BABAM1 (ENSMNEG00000033456) #30	ANKLE1 (ENSMNEG00000032946) #31	ABHD8 (ENSMNEG00000034693) #32	ENSMNEG00000041354 #33	DDA1 (ENSMNEG00000044354) #34	ANO8 (ENSMNEG00000029983) #35	GTPBP3 (ENSMNEG00000038380) #36
Macaca_a	ANCESTRAL SPECIES	1	ENSGT01030000236338	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00940000161635 #20	ENSGT01100000263539.b.a.a.a.a.a.b.a.a.a.a.a.b.a.a	ENSGT01100000263493.a.b.b.a.a.b.a.a.a.d.b	ENSGT00940000159560 #21	ENSGT00980000200725	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361.h #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Rhesus	MODERN SPECIES	10	KLF2 (ENSMMUG00000028855) #11	EPS15L1 (ENSMMUG00000000994) #12	CALR3 (ENSMMUG00000040142) #13	C19H19orf44 (ENSMMUG00000028852) #14	CHERP (ENSMMUG00000012958) #15	SLC35E1 (ENSMMUG00000012959) #16	MED26 (ENSMMUG00000042837) #17	ENSMMUG00000062590	TMEM38A (ENSMMUG00000052014) #19	ENSMMUG00000061494	NWD1 (ENSMMUG00000018503) #20	ENSMMUG00000064661	ENSMMUG00000054759	SIN3B (ENSMMUG00000018504) #21	ENSMMUG00000056913	F2RL3 (ENSMMUG00000058540) #22	CPAMD8 (ENSMMUG00000017254) #23	HAUS8 (ENSMMUG00000000491) #24	ENSMMUG00000057451	ENSMMUG00000057655	ENSMMUG00000011588 #25	USE1 (ENSMMUG00000011589) #26	OCEL1 (ENSMMUG00000011931) #27	NR2F6 (ENSMMUG00000028849) #28	USHBP1 (ENSMMUG00000013924) #29	BABAM1 (ENSMMUG00000013923) #30	ENSMMUG00000064093	ANKLE1 (ENSMMUG00000016228) #31	ABHD8 (ENSMMUG00000009656) #32	MRPL34 (ENSMMUG00000009657) #33	DDA1 (ENSMMUG00000016231) #34
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b.d #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b.d #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Sooty mangabey	MODERN SPECIES	347	CIB3 (ENSCATG00000029629) #8	FAM32A (ENSCATG00000042554) #9	AP1M1 (ENSCATG00000042458) #10	KLF2 (ENSCATG00000043747) #11	EPS15L1 (ENSCATG00000033150) #12	CALR3 (ENSCATG00000031211) #13	C19orf44 (ENSCATG00000040878) #14	CHERP (ENSCATG00000031409) #15	SLC35E1 (ENSCATG00000031586) #16	MED26 (ENSCATG00000041612) #17	SMIM7 (ENSCATG00000033433) #18	TMEM38A (ENSCATG00000030391) #19	ENSCATG00000030522	NWD1 (ENSCATG00000016343) #20	SIN3B (ENSCATG00000043735) #21	F2RL3 (ENSCATG00000042605) #22	CPAMD8 (ENSCATG00000030894) #23	HAUS8 (ENSCATG00000021545) #24	MYO9B (ENSCATG00000042263) #25	USE1 (ENSCATG00000036973) #26	OCEL1 (ENSCATG00000044087) #27	NR2F6 (ENSCATG00000032407) #28	USHBP1 (ENSCATG00000031625) #29	BABAM1 (ENSCATG00000032000) #30	ANKLE1 (ENSCATG00000035073) #31	ABHD8 (ENSCATG00000040979) #32	ENSCATG00000032681 #33	DDA1 (ENSCATG00000035158) #34	ANO8 (ENSCATG00000032795) #35	GTPBP3 (ENSCATG00000030444) #36	PLVAP (ENSCATG00000038826) #37
Olive baboon	MODERN SPECIES	12	RAB8A (ENSPANG00000031542)	HSH2D (ENSPANG00000050187) #7	CIB3 (ENSPANG00000016651) #8	FAM32A (ENSPANG00000007385) #9	AP1M1 (ENSPANG00000026386) #10	KLF2 (ENSPANG00000040729) #11	EPS15L1 (ENSPANG00000010521) #12	CALR3 (ENSPANG00000018584) #13	C19orf44 (ENSPANG00000009377) #14	CHERP (ENSPANG00000011698) #15	SLC35E1 (ENSPANG00000011400) #16	MED26 (ENSPANG00000033826) #17	TMEM38A (ENSPANG00000031300) #19	NWD1 (ENSPANG00000034320) #20	SIN3B (ENSPANG00000004466) #21	F2RL3 (ENSPANG00000032456) #22	CPAMD8 (ENSPANG00000017790) #23	HAUS8 (ENSPANG00000004445) #24	MYO9B (ENSPANG00000020428) #25	USE1 (ENSPANG00000010108) #26	OCEL1 (ENSPANG00000015377) #27	NR2F6 (ENSPANG00000016649) #28	USHBP1 (ENSPANG00000046152) #29	BABAM1 (ENSPANG00000033388) #30	ANKLE1 (ENSPANG00000023923) #31	ABHD8 (ENSPANG00000004510) #32	ENSPANG00000030930 #33	DDA1 (ENSPANG00000015034) #34	ANO8 (ENSPANG00000017975) #35	GTPBP3 (ENSPANG00000017711) #36	PLVAP (ENSPANG00000013958) #37
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b.e.a #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505.e #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240.e #33	ENSGT00390000007029.j.b #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	621															SIN3B (ENSRBIG00000026669) #21	ENSRBIG00000033215 #22	ENSRBIG00000024085 #22	CPAMD8 (ENSRBIG00000044407) #23	HAUS8 (ENSRBIG00000042872) #24	MYO9B (ENSRBIG00000034981) #25	USE1 (ENSRBIG00000032000) #26	OCEL1 (ENSRBIG00000024617) #27	NR2F6 (ENSRBIG00000000548) #28	USHBP1 (ENSRBIG00000038199) #29	BABAM1 (ENSRBIG00000043811) #30	ANKLE1 (ENSRBIG00000031846) #31	ENSRBIG00000010999 #33	DDA1 (ENSRBIG00000029678) #34	ANO8 (ENSRBIG00000040344) #35	GTPBP3 (ENSRBIG00000039889) #36	PLVAP (ENSRBIG00000038932) #37
Black snub-nosed monkey	MODERN SPECIES	621														SIN3B (ENSRBIG00000026669) #21	ENSRBIG00000033215 #22	ENSRBIG00000024085 #22	CPAMD8 (ENSRBIG00000044407) #23	HAUS8 (ENSRBIG00000042872) #24	MYO9B (ENSRBIG00000034981) #25	USE1 (ENSRBIG00000032000) #26	OCEL1 (ENSRBIG00000024617) #27	NR2F6 (ENSRBIG00000000548) #28	USHBP1 (ENSRBIG00000038199) #29	BABAM1 (ENSRBIG00000043811) #30	ANKLE1 (ENSRBIG00000031846) #31	ENSRBIG00000010999 #33	DDA1 (ENSRBIG00000029678) #34	ANO8 (ENSRBIG00000040344) #35	GTPBP3 (ENSRBIG00000039889) #36	PLVAP (ENSRBIG00000038932) #37	CCDC194 (ENSRBIG00000036240)
Golden snub-nosed monkey	MODERN SPECIES	975	RAB8A (ENSRROG00000029919)	HSH2D (ENSRROG00000026918) #7	CIB3 (ENSRROG00000030426) #8	FAM32A (ENSRROG00000034975) #9	AP1M1 (ENSRROG00000024253) #10	ENSRROG00000037623 #11	EPS15L1 (ENSRROG00000045198) #12	CALR3 (ENSRROG00000044958) #13	ENSRROG00000045590 #14	CHERP (ENSRROG00000040770) #15	MED26 (ENSRROG00000030840) #17	SMIM7 (ENSRROG00000037813) #18	TMEM38A (ENSRROG00000038969) #19	NWD1 (ENSRROG00000029874) #20	SIN3B (ENSRROG00000040763) #21	F2RL3 (ENSRROG00000028015) #22	CPAMD8 (ENSRROG00000030302) #23	HAUS8 (ENSRROG00000041081) #24	MYO9B (ENSRROG00000033422) #25	USE1 (ENSRROG00000036840) #26	OCEL1 (ENSRROG00000030359) #27	NR2F6 (ENSRROG00000033865) #28	USHBP1 (ENSRROG00000045080) #29	BABAM1 (ENSRROG00000034274) #30	ANKLE1 (ENSRROG00000002000) #31	ABHD8 (ENSRROG00000039901) #32	ENSRROG00000028622 #33	DDA1 (ENSRROG00000038059) #34	ANO8 (ENSRROG00000038941) #35	GTPBP3 (ENSRROG00000033731) #36	PLVAP (ENSRROG00000016070) #37
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Suina	ANCESTRAL SPECIES	39	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Chacoan peccary	MODERN SPECIES	769	HSH2D (ENSCWAG00000008454) #7	CIB3 (ENSCWAG00000008526) #8	ENSCWAG00000008644 #9	AP1M1 (ENSCWAG00000008740) #10	KLF2 (ENSCWAG00000009049) #11	EPS15L1 (ENSCWAG00000009107) #12	CALR3 (ENSCWAG00000009717) #13	C19orf44 (ENSCWAG00000009784) #14	CHERP (ENSCWAG00000009961) #15	SLC35E1 (ENSCWAG00000010004) #16	MED26 (ENSCWAG00000010054) #17	SMIM7 (ENSCWAG00000010095) #18	TMEM38A (ENSCWAG00000010149) #19	NWD1 (ENSCWAG00000010212) #20	SIN3B (ENSCWAG00000010640) #21	F2RL3 (ENSCWAG00000010803) #22	ENSCWAG00000010842 #23	HAUS8 (ENSCWAG00000010935) #24	MYO9B (ENSCWAG00000011012) #25	OCEL1 (ENSCWAG00000011522) #27	NR2F6 (ENSCWAG00000011551) #28	USHBP1 (ENSCWAG00000011598) #29	BABAM1 (ENSCWAG00000011719) #30	ANKLE1 (ENSCWAG00000011822) #31	ABHD8 (ENSCWAG00000012301) #32	MRPL34 (ENSCWAG00000012336) #33	DDA1 (ENSCWAG00000012385) #34	ANO8 (ENSCWAG00000012420) #35	GTPBP3 (ENSCWAG00000012458) #36	PLVAP (ENSCWAG00000012865) #37	CCDC194 (ENSCWAG00000012943)
Pig	MODERN SPECIES	10	HSH2D (ENSSSCG00000013853) #7	CIB3 (ENSSSCG00000055450) #8	FAM32A (ENSSSCG00000013855) #9	AP1M1 (ENSSSCG00000013856) #10	KLF2 (ENSSSCG00000038911) #11	EPS15L1 (ENSSSCG00000013857) #12	CALR3 (ENSSSCG00000013858) #13	C19orf44 (ENSSSCG00000013859) #14	CHERP (ENSSSCG00000013860) #15	SLC35E1 (ENSSSCG00000013861) #16	MED26 (ENSSSCG00000013862) #17	SMIM7 (ENSSSCG00000013863) #18	TMEM38A (ENSSSCG00000013864) #19	NWD1 (ENSSSCG00000013865) #20	SIN3B (ENSSSCG00000013867) #21	F2RL3 (ENSSSCG00000013868) #22	CPAMD8 (ENSSSCG00000013869) #23	HAUS8 (ENSSSCG00000036584) #24	MYO9B (ENSSSCG00000013876) #25	USE1 (ENSSSCG00000013875) #26	OCEL1 (ENSSSCG00000013874) #27	NR2F6 (ENSSSCG00000013873) #28	USHBP1 (ENSSSCG00000036575) #29	BABAM1 (ENSSSCG00000031073) #30	ANKLE1 (ENSSSCG00000037099) #31	ABHD8 (ENSSSCG00000031877) #32	MRPL34 (ENSSSCG00000039295) #33	DDA1 (ENSSSCG00000031251) #34	ANO8 (ENSSSCG00000039330) #35	GTPBP3 (ENSSSCG00000038440) #36	PLVAP (ENSSSCG00000037025) #37
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Camelidae	ANCESTRAL SPECIES	64	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00940000171473	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Arabian camel	MODERN SPECIES	14	HSH2D (ENSCDRG00005021516) #7	CIB3 (ENSCDRG00005021511) #8	FAM32A (ENSCDRG00005021508) #9	AP1M1 (ENSCDRG00005021495) #10	ENSCDRG00005021486 #11	EPS15L1 (ENSCDRG00005021471) #12	CALR3 (ENSCDRG00005021458) #13	C19orf44 (ENSCDRG00005021450) #14	CHERP (ENSCDRG00005021438) #15	SLC35E1 (ENSCDRG00005021428) #16	MED26 (ENSCDRG00005021423) #17	ENSCDRG00005021418	TMEM38A (ENSCDRG00005021413) #19	NWD1 (ENSCDRG00005021355) #20	SIN3B (ENSCDRG00005021342) #21	F2RL3 (ENSCDRG00005021339) #22	CPAMD8 (ENSCDRG00005021310) #23	HAUS8 (ENSCDRG00005021295) #24	MYO9B (ENSCDRG00005016857) #25	USE1 (ENSCDRG00005016169) #26	ENSCDRG00005016126 #27	NR2F6 (ENSCDRG00005016096) #28	USHBP1 (ENSCDRG00005015824) #29	BABAM1 (ENSCDRG00005015746) #30	ANKLE1 (ENSCDRG00005015708) #31	ABHD8 (ENSCDRG00005015688) #32	ENSCDRG00005015656 #33	DDA1 (ENSCDRG00005015627) #34	ANO8 (ENSCDRG00005015573) #35	GTPBP3 (ENSCDRG00005015456) #36	PLVAP (ENSCDRG00005015397) #37
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845.md #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845.md #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845.ld.b #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000177900	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845.ld.b #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Beluga whale	MODERN SPECIES	27	FAM32A (ENSDLEG00000007565) #9	AP1M1 (ENSDLEG00000007571) #10	KLF2 (ENSDLEG00000007589) #11	EPS15L1 (ENSDLEG00000007611) #12	CALR3 (ENSDLEG00000000040) #13	ENSDLEG00000000052 #14	ENSDLEG00000000062 #14	CHERP (ENSDLEG00000000145) #15	SLC35E1 (ENSDLEG00000000542) #16	MED26 (ENSDLEG00000000558) #17	ENSDLEG00000000572	TMEM38A (ENSDLEG00000000590) #19	ENSDLEG00000000598	ENSDLEG00000000617 #20	SIN3B (ENSDLEG00000000669) #21	F2RL3 (ENSDLEG00000000796) #22	CPAMD8 (ENSDLEG00000000827) #23	HAUS8 (ENSDLEG00000000946) #24	MYO9B (ENSDLEG00000001055) #25	USE1 (ENSDLEG00000001286) #26	ENSDLEG00000001322 #27	NR2F6 (ENSDLEG00000001328) #28	USHBP1 (ENSDLEG00000001348) #29	BABAM1 (ENSDLEG00000001404) #30	ANKLE1 (ENSDLEG00000001418) #31	ABHD8 (ENSDLEG00000001497) #32	MRPL34 (ENSDLEG00000001507) #33	ENSDLEG00000001517 #34	ANO8 (ENSDLEG00000001536) #35	GTPBP3 (ENSDLEG00000001561) #36	PLVAP (ENSDLEG00000001574) #37
Narwhal	MODERN SPECIES	298	CIB3 (ENSMMNG00015003673) #8	FAM32A (ENSMMNG00015003638) #9	AP1M1 (ENSMMNG00015003576) #10	KLF2 (ENSMMNG00015003540) #11	EPS15L1 (ENSMMNG00015003374) #12	CALR3 (ENSMMNG00015003287) #13	C19orf44 (ENSMMNG00015003248) #14	CHERP (ENSMMNG00015003215) #15	SLC35E1 (ENSMMNG00015003184) #16	MED26 (ENSMMNG00015003169) #17	SMIM7 (ENSMMNG00015003142) #18	TMEM38A (ENSMMNG00015003105) #19	ENSMMNG00015003083	ENSMMNG00015003065 #20	SIN3B (ENSMMNG00015003000) #21	F2RL3 (ENSMMNG00015002969) #22	ENSMMNG00015002951 #23	HAUS8 (ENSMMNG00015002915) #24	MYO9B (ENSMMNG00015002729) #25	USE1 (ENSMMNG00015002651) #26	ENSMMNG00015002621 #27	NR2F6 (ENSMMNG00015002593) #28	USHBP1 (ENSMMNG00015002540) #29	BABAM1 (ENSMMNG00015002480) #30	ANKLE1 (ENSMMNG00015002389) #31	ABHD8 (ENSMMNG00015002331) #32	MRPL34 (ENSMMNG00015002309) #33	DDA1 (ENSMMNG00015002288) #34	ANO8 (ENSMMNG00015002241) #35	GTPBP3 (ENSMMNG00015002166) #36	PLVAP (ENSMMNG00015002138) #37
Vaquita	MODERN SPECIES	14	RAB8A (ENSPSNG00000001927)	HSH2D (ENSPSNG00000001906) #7	CIB3 (ENSPSNG00000001871) #8	FAM32A (ENSPSNG00000001837) #9	AP1M1 (ENSPSNG00000001782) #10	KLF2 (ENSPSNG00000001738) #11	EPS15L1 (ENSPSNG00000001575) #12	CALR3 (ENSPSNG00000001442) #13	C19orf44 (ENSPSNG00000001424) #14	CHERP (ENSPSNG00000001401) #15	SLC35E1 (ENSPSNG00000001374) #16	MED26 (ENSPSNG00000001357) #17	SMIM7 (ENSPSNG00000001334) #18	TMEM38A (ENSPSNG00000001298) #19	SIN3B (ENSPSNG00000001166) #21	F2RL3 (ENSPSNG00000001140) #22	ENSPSNG00000001120 #23	HAUS8 (ENSPSNG00000001098) #24	MYO9B (ENSPSNG00000001059) #25	USE1 (ENSPSNG00000001004) #26	ENSPSNG00000000961 #27	NR2F6 (ENSPSNG00000000940) #28	USHBP1 (ENSPSNG00000000887) #29	BABAM1 (ENSPSNG00000000844) #30	ANKLE1 (ENSPSNG00000000762) #31	ABHD8 (ENSPSNG00000000690) #32	MRPL34 (ENSPSNG00000000675) #33	DDA1 (ENSPSNG00000000659) #34	ANO8 (ENSPSNG00000000634) #35	GTPBP3 (ENSPSNG00000000563) #36	PLVAP (ENSPSNG00000000513) #37
Dolphin	MODERN SPECIES	724							CALR3 (ENSTTRG00000014988) #13	C19orf44 (ENSTTRG00000014994) #14	CHERP (ENSTTRG00000015006) #15	SLC35E1 (ENSTTRG00000015013) #16	MED26 (ENSTTRG00000015017) #17	SMIM7 (ENSTTRG00000015020) #18	TMEM38A (ENSTTRG00000015022) #19	NWD1 (ENSTTRG00000015023) #20	SIN3B (ENSTTRG00000015025) #21	F2RL3 (ENSTTRG00000015026) #22	CPAMD8 (ENSTTRG00000015027) #23
Sperm whale	MODERN SPECIES	11	ENSPCTG00005007075	ENSPCTG00005007090	ENSPCTG00005007098	TPM4 (ENSPCTG00005007197)	HSH2D (ENSPCTG00005007400) #7	CIB3 (ENSPCTG00005007426) #8	FAM32A (ENSPCTG00005007496) #9	AP1M1 (ENSPCTG00005007569) #10	KLF2 (ENSPCTG00005007724) #11	EPS15L1 (ENSPCTG00005007761) #12	CALR3 (ENSPCTG00005007863) #13	C19orf44 (ENSPCTG00005007900) #14	TMEM38A (ENSPCTG00005007925) #19	NWD1 (ENSPCTG00005007947) #20	SIN3B (ENSPCTG00005008035) #21	F2RL3 (ENSPCTG00005008169) #22	ENSPCTG00005008192 #23	ENSPCTG00005008241	HAUS8 (ENSPCTG00005008257) #24	ENSPCTG00005008284 #25	KCNN1 (ENSPCTG00005008359)	UNC13A (ENSPCTG00005008632)	MAP1S (ENSPCTG00005011006)	PGPEP1 (ENSPCTG00005011099)	ENSPCTG00005011193	KLHL26 (ENSPCTG00005011236)	COMP (ENSPCTG00005011285)	CRTC1 (ENSPCTG00005011514)	BORCS8 (ENSPCTG00005011972)	RFXANK (ENSPCTG00005012057)	NR2C2AP (ENSPCTG00005012090)
Blue whale	MODERN SPECIES	14	CIB3 (ENSBMSG00010006392) #8	FAM32A (ENSBMSG00010006374) #9	AP1M1 (ENSBMSG00010006345) #10	KLF2 (ENSBMSG00010006321) #11	EPS15L1 (ENSBMSG00010006235) #12	CALR3 (ENSBMSG00010006202) #13	C19orf44 (ENSBMSG00010006183) #14	CHERP (ENSBMSG00010006159) #15	SLC35E1 (ENSBMSG00010006147) #16	MED26 (ENSBMSG00010006136) #17	SMIM7 (ENSBMSG00010006116) #18	TMEM38A (ENSBMSG00010006085) #19	ENSBMSG00010006065	NWD1 (ENSBMSG00010006039) #20	SIN3B (ENSBMSG00010005984) #21	F2RL3 (ENSBMSG00010005963) #22	ENSBMSG00010005944 #23	HAUS8 (ENSBMSG00010005924) #24	MYO9B (ENSBMSG00010005892) #25	USE1 (ENSBMSG00010005863) #26	ENSBMSG00010005846 #27	NR2F6 (ENSBMSG00010005831) #28	USHBP1 (ENSBMSG00010005784) #29	BABAM1 (ENSBMSG00010005753) #30	ENSBMSG00010005730 #31	ABHD8 (ENSBMSG00010005717) #32	MRPL34 (ENSBMSG00010005709) #33	ANO8 (ENSBMSG00010005676) #35	GTPBP3 (ENSBMSG00010005635) #36	PLVAP (ENSBMSG00010005610) #37	CCDC194 (ENSBMSG00010005600)
Pecora	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Yarkand deer	MODERN SPECIES	32	HSH2D (ENSCHYG00000002499) #7	CIB3 (ENSCHYG00000002478) #8	ENSCHYG00000002452 #9	AP1M1 (ENSCHYG00000002379) #10	KLF2 (ENSCHYG00000002284) #11	EPS15L1 (ENSCHYG00000002153) #12	CALR3 (ENSCHYG00000002071) #13	ENSCHYG00000002057	C19orf44 (ENSCHYG00000002039) #14	CHERP (ENSCHYG00000002017) #15	SLC35E1 (ENSCHYG00000001989) #16	MED26 (ENSCHYG00000001946) #17	TMEM38A (ENSCHYG00000001899) #19	NWD1 (ENSCHYG00000001771) #20	SIN3B (ENSCHYG00000001628) #21	F2RL3 (ENSCHYG00000001584) #22	ENSCHYG00000001563 #23	HAUS8 (ENSCHYG00000001537) #24	MYO9B (ENSCHYG00000001262) #25	USE1 (ENSCHYG00000001161) #26	ENSCHYG00000001124 #27	NR2F6 (ENSCHYG00000001111) #28	USHBP1 (ENSCHYG00000001050) #29	BABAM1 (ENSCHYG00000001004) #30	ANKLE1 (ENSCHYG00000000986) #31	ABHD8 (ENSCHYG00000000967) #32	MRPL34 (ENSCHYG00000000960) #33	DDA1 (ENSCHYG00000000948) #34	ANO8 (ENSCHYG00000000887) #35	GTPBP3 (ENSCHYG00000000820) #36	PLVAP (ENSCHYG00000000785) #37
Percora_a	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.o.a #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Bos	ANCESTRAL SPECIES	34	ENSGT00940000160466 #8	ENSGT00390000013811.l #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.o.a #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000160466 #8	ENSGT00390000013811.l #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000006922.m.b.b.a.z	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.o.a #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Cow	MODERN SPECIES	26	CIB3 (ENSBTAG00000016179) #8	FAM32A (ENSBTAG00000046846) #9	AP1M1 (ENSBTAG00000013329) #10	KLF2 (ENSBTAG00000052504) #11	EPS15L1 (ENSBTAG00000009990) #12	CALR3 (ENSBTAG00000033222) #13	ENSBTAG00000027878	C7H19orf44 (ENSBTAG00000002447) #14	CHERP (ENSBTAG00000005289) #15	SLC35E1 (ENSBTAG00000005295) #16	MED26 (ENSBTAG00000005312) #17	SMIM7 (ENSBTAG00000013613) #18	TMEM38A (ENSBTAG00000013614) #19	NWD1 (ENSBTAG00000009328) #20	SIN3B (ENSBTAG00000009330) #21	F2RL3 (ENSBTAG00000033278) #22	CPAMD8 (ENSBTAG00000009331) #23	HAUS8 (ENSBTAG00000007366) #24	MYO9B (ENSBTAG00000011125) #25	USE1 (ENSBTAG00000011134) #26	OCEL1 (ENSBTAG00000011135) #27	NR2F6 (ENSBTAG00000011136) #28	USHBP1 (ENSBTAG00000015108) #29	BABAM1 (ENSBTAG00000012587) #30	ANKLE1 (ENSBTAG00000012592) #31	ABHD8 (ENSBTAG00000025809) #32	MRPL34 (ENSBTAG00000014579) #33	DDA1 (ENSBTAG00000017068) #34	ANO8 (ENSBTAG00000017074) #35	GTPBP3 (ENSBTAG00000004200) #36	PLVAP (ENSBTAG00000005434) #37
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005002600 #9	AP1M1 (ENSBIXG00005000096) #10	ENSBIXG00005016253	KLF2 (ENSBIXG00005016244) #11	EPS15L1 (ENSBIXG00005016176) #12	CALR3 (ENSBIXG00005002541) #13	ENSBIXG00005002534	C19orf44 (ENSBIXG00005015971) #14	CHERP (ENSBIXG00005015964) #15	SLC35E1 (ENSBIXG00005015934) #16	MED26 (ENSBIXG00005002507) #17	SMIM7 (ENSBIXG00005015886) #18	TMEM38A (ENSBIXG00005015850) #19	NWD1 (ENSBIXG00005015837) #20	SIN3B (ENSBIXG00005015805) #21	F2RL3 (ENSBIXG00005015783) #22	CPAMD8 (ENSBIXG00005002461) #23	HAUS8 (ENSBIXG00005015727) #24	MYO9B (ENSBIXG00005015690) #25	USE1 (ENSBIXG00005006346) #26	OCEL1 (ENSBIXG00005002348) #27	NR2F6 (ENSBIXG00005015582) #28	USHBP1 (ENSBIXG00005015565) #29	BABAM1 (ENSBIXG00005015501) #30	ANKLE1 (ENSBIXG00005002276) #31	ABHD8 (ENSBIXG00005006561) #32	DDA1 (ENSBIXG00005015379) #34	ANO8 (ENSBIXG00005002255) #35	GTPBP3 (ENSBIXG00005015344) #36	PLVAP (ENSBIXG00005015264) #37	CCDC194 (ENSBIXG00005015250)
Bos_a	ANCESTRAL SPECIES	29	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.l #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j.o.a #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Domestic yak	MODERN SPECIES	27	ENSBGRG00000011352 #9	AP1M1 (ENSBGRG00000011574) #10	KLF2 (ENSBGRG00000012120) #11	EPS15L1 (ENSBGRG00000012185) #12	CALR3 (ENSBGRG00000013489) #13	ENSBGRG00000013593	C19orf44 (ENSBGRG00000013614) #14	CHERP (ENSBGRG00000013675) #15	SLC35E1 (ENSBGRG00000014574) #16	MED26 (ENSBGRG00000014660) #17	ENSBGRG00000014733	SMIM7 (ENSBGRG00000014759) #18	TMEM38A (ENSBGRG00000015036) #19	NWD1 (ENSBGRG00000015180) #20	SIN3B (ENSBGRG00000016151) #21	F2RL3 (ENSBGRG00000016706) #22	ENSBGRG00000016753 #23	HAUS8 (ENSBGRG00000016901) #24	MYO9B (ENSBGRG00000017208) #25	ENSBGRG00000024426 #26	OCEL1 (ENSBGRG00000024486) #27	NR2F6 (ENSBGRG00000024506) #28	USHBP1 (ENSBGRG00000024543) #29	BABAM1 (ENSBGRG00000024682) #30	ABHD8 (ENSBGRG00000024888) #32	MRPL34 (ENSBGRG00000024909) #33	DDA1 (ENSBGRG00000024920) #34	ANO8 (ENSBGRG00000024938) #35	GTPBP3 (ENSBGRG00000024997) #36	PLVAP (ENSBGRG00000025077) #37	CCDC194 (ENSBGRG00000025103)
American bison	MODERN SPECIES	3138	CIB3 (ENSBBBG00000002506) #8	ENSBBBG00000001765 #9	AP1M1 (ENSBBBG00000012827) #10	ENSBBBG00000012776	EPS15L1 (ENSBBBG00000012765) #12	CALR3 (ENSBBBG00000012660) #13	ENSBBBG00000012617	C19orf44 (ENSBBBG00000012609) #14	CHERP (ENSBBBG00000012600) #15	SLC35E1 (ENSBBBG00000012572) #16	MED26 (ENSBBBG00000012563) #17	SMIM7 (ENSBBBG00000012541) #18	TMEM38A (ENSBBBG00000002393) #19	NWD1 (ENSBBBG00000012497) #20	SIN3B (ENSBBBG00000012458) #21	F2RL3 (ENSBBBG00000002379) #22	ENSBBBG00000012431 #23	HAUS8 (ENSBBBG00000012407) #24	MYO9B (ENSBBBG00000012366) #25	USE1 (ENSBBBG00000011840) #26	ENSBBBG00000011824 #27	USHBP1 (ENSBBBG00000011818) #29	BABAM1 (ENSBBBG00000011781) #30	ANKLE1 (ENSBBBG00000002178) #31	ABHD8 (ENSBBBG00000002174) #32	MRPL34 (ENSBBBG00000011730) #33	ENSBBBG00000011724 #34	ANO8 (ENSBBBG00000011716) #35	GTPBP3 (ENSBBBG00000011649) #36	PLVAP (ENSBBBG00000007023) #37	CCDC194 (ENSBBBG00000011597)
Caprinae	ANCESTRAL SPECIES	32	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Goat	MODERN SPECIES	26	CIB3 (ENSCHIG00000026288) #8	ENSCHIG00000020839 #9	AP1M1 (ENSCHIG00000015265) #10	KLF2 (ENSCHIG00000008795) #11	EPS15L1 (ENSCHIG00000018388) #12	CALR3 (ENSCHIG00000015217) #13	ENSCHIG00000026964	ENSCHIG00000023160 #14	CHERP (ENSCHIG00000013765) #15	SLC35E1 (ENSCHIG00000008462) #16	MED26 (ENSCHIG00000025800) #17	SMIM7 (ENSCHIG00000026993) #18	TMEM38A (ENSCHIG00000024027) #19	NWD1 (ENSCHIG00000009765) #20	SIN3B (ENSCHIG00000016199) #21	F2RL3 (ENSCHIG00000014315) #22	ENSCHIG00000004512 #23	ENSCHIG00000011798	ENSCHIG00000012784 #24	MYO9B (ENSCHIG00000011652) #25	PLVAP (ENSCHIG00000021053) #37	USE1 (ENSCHIG00000026958) #26	ENSCHIG00000020685 #27	NR2F6 (ENSCHIG00000026142) #28	USHBP1 (ENSCHIG00000019994) #29	BABAM1 (ENSCHIG00000024953) #30	ANKLE1 (ENSCHIG00000019070) #31	ABHD8 (ENSCHIG00000019222) #32	MRPL34 (ENSCHIG00000014263) #33	DDA1 (ENSCHIG00000014785) #34	ANO8 (ENSCHIG00000019436) #35
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020018500 #7	CIB3 (ENSOARG00020018403) #8	FAM32A (ENSOARG00020018302) #9	AP1M1 (ENSOARG00020017923) #10	KLF2 (ENSOARG00020017838) #11	EPS15L1 (ENSOARG00020016263) #12	CALR3 (ENSOARG00020016117) #13	C19orf44 (ENSOARG00020016066) #14	CHERP (ENSOARG00020015998) #15	SLC35E1 (ENSOARG00020015942) #16	MED26 (ENSOARG00020015901) #17	SMIM7 (ENSOARG00020015755) #18	TMEM38A (ENSOARG00020015674) #19	NWD1 (ENSOARG00020014908) #20	SIN3B (ENSOARG00020014654) #21	F2RL3 (ENSOARG00020014589) #22	ENSOARG00020014420 #23	ENSOARG00020014343 #24	MYO9B (ENSOARG00020012985) #25	USE1 (ENSOARG00020012823) #26	ENSOARG00020012755 #27	NR2F6 (ENSOARG00020012694) #28	USHBP1 (ENSOARG00020012433) #29	BABAM1 (ENSOARG00020012326) #30	ANKLE1 (ENSOARG00020011788) #31	ABHD8 (ENSOARG00020011690) #32	MRPL34 (ENSOARG00020011633) #33	DDA1 (ENSOARG00020011597) #34	ANO8 (ENSOARG00020011422) #35	GTPBP3 (ENSOARG00020011201) #36	PLVAP (ENSOARG00020011074) #37
Siberian musk deer	MODERN SPECIES	1231	CIB3 (ENSMMSG00000014086) #8	ENSMMSG00000014124 #9	AP1M1 (ENSMMSG00000014184) #10	KLF2 (ENSMMSG00000014385) #11	EPS15L1 (ENSMMSG00000014438) #12	CALR3 (ENSMMSG00000014716) #13	C19orf44 (ENSMMSG00000014736) #14	ENSMMSG00000014756	CHERP (ENSMMSG00000014766) #15	SLC35E1 (ENSMMSG00000014784) #16	MED26 (ENSMMSG00000014806) #17	ENSMMSG00000014824	TMEM38A (ENSMMSG00000014854) #19	NWD1 (ENSMMSG00000014904) #20	SIN3B (ENSMMSG00000015118) #21	F2RL3 (ENSMMSG00000015189) #22	CPAMD8 (ENSMMSG00000015238) #23	HAUS8 (ENSMMSG00000015527) #24	MYO9B (ENSMMSG00000015645) #25	USE1 (ENSMMSG00000016000) #26	ENSMMSG00000016046 #27	NR2F6 (ENSMMSG00000016062) #28	USHBP1 (ENSMMSG00000016091) #29	BABAM1 (ENSMMSG00000016195) #30	ANKLE1 (ENSMMSG00000016269) #31	ABHD8 (ENSMMSG00000016667) #32	ENSMMSG00000016706 #33	DDA1 (ENSMMSG00000016739) #34	ANO8 (ENSMMSG00000016774) #35	GTPBP3 (ENSMMSG00000016921) #36	PLVAP (ENSMMSG00000017042) #37
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT01030000236338	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00940000171473	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Ursus	ANCESTRAL SPECIES	5										ENSGT00390000000259 #17	ENSGT00940000171473	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240.i #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
American black bear	MODERN SPECIES	801																F2RL3 (ENSUAMG00000011584) #22	ENSUAMG00000011578 #23	HAUS8 (ENSUAMG00000011569) #24	MYO9B (ENSUAMG00000011561) #25	USE1 (ENSUAMG00000011555) #26	OCEL1 (ENSUAMG00000011551) #27	NR2F6 (ENSUAMG00000011548) #28	USHBP1 (ENSUAMG00000011546) #29	BABAM1 (ENSUAMG00000011545) #30	ANKLE1 (ENSUAMG00000011542) #31	ABHD8 (ENSUAMG00000011538) #32	ENSUAMG00000011536 #33	ENSUAMG00000011533 #34
Giant Panda	MODERN SPECIES	14	HSH2D (ENSAMEG00000009875) #7	CIB3 (ENSAMEG00000009877) #8	FAM32A (ENSAMEG00000030487) #9	AP1M1 (ENSAMEG00000009898) #10	ENSAMEG00000009942	EPS15L1 (ENSAMEG00000009945) #12	CALR3 (ENSAMEG00000009994) #13	C19orf44 (ENSAMEG00000010044) #14	CHERP (ENSAMEG00000010048) #15	SLC35E1 (ENSAMEG00000010089) #16	MED26 (ENSAMEG00000028493) #17	ENSAMEG00000028498	TMEM38A (ENSAMEG00000026882) #19	NWD1 (ENSAMEG00000010118) #20	SIN3B (ENSAMEG00000010148) #21	F2RL3 (ENSAMEG00000010196) #22	CPAMD8 (ENSAMEG00000010204) #23	HAUS8 (ENSAMEG00000010225) #24	MYO9B (ENSAMEG00000010241) #25	USE1 (ENSAMEG00000030062) #26	OCEL1 (ENSAMEG00000010363) #27	NR2F6 (ENSAMEG00000010370) #28	USHBP1 (ENSAMEG00000010396) #29	BABAM1 (ENSAMEG00000010423) #30	ANKLE1 (ENSAMEG00000010455) #31	ABHD8 (ENSAMEG00000010469) #32	MRPL34 (ENSAMEG00000030065) #33	DDA1 (ENSAMEG00000029322) #34	ANO8 (ENSAMEG00000028701) #35	GTPBP3 (ENSAMEG00000010489) #36	PLVAP (ENSAMEG00000010513) #37
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a.d #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
American mink	MODERN SPECIES	58	CIB3 (ENSNVIG00000012192) #8	FAM32A (ENSNVIG00000012240) #9	AP1M1 (ENSNVIG00000012262) #10	KLF2 (ENSNVIG00000012328) #11	EPS15L1 (ENSNVIG00000012435) #12	CALR3 (ENSNVIG00000015169) #13	C19orf44 (ENSNVIG00000015206) #14	CHERP (ENSNVIG00000015269) #15	SLC35E1 (ENSNVIG00000015315) #16	MED26 (ENSNVIG00000015329) #17	SMIM7 (ENSNVIG00000015340) #18	TMEM38A (ENSNVIG00000015373) #19	ENSNVIG00000015386	NWD1 (ENSNVIG00000015394) #20	SIN3B (ENSNVIG00000015425) #21	F2RL3 (ENSNVIG00000015497) #22	ENSNVIG00000015521 #23	HAUS8 (ENSNVIG00000015548) #24	MYO9B (ENSNVIG00000015587) #25	USE1 (ENSNVIG00000015714) #26	OCEL1 (ENSNVIG00000015761) #27	NR2F6 (ENSNVIG00000015777) #28	USHBP1 (ENSNVIG00000015799) #29	BABAM1 (ENSNVIG00000015847) #30	ANKLE1 (ENSNVIG00000015900) #31	ABHD8 (ENSNVIG00000015935) #32	RM34 (ENSNVIG00000015947) #33	DDA1 (ENSNVIG00000015957) #34	ANO8 (ENSNVIG00000015964) #35	GTPBP3 (ENSNVIG00000016000) #36	PLVAP (ENSNVIG00000016032) #37
Ferret	MODERN SPECIES	238	TPM4 (ENSMPUG00000016054)	RAB8A (ENSMPUG00000016053)	HSH2D (ENSMPUG00000016050) #7	CIB3 (ENSMPUG00000016049) #8	FAM32A (ENSMPUG00000016048) #9	AP1M1 (ENSMPUG00000016047) #10	EPS15L1 (ENSMPUG00000016046) #12	CALR3 (ENSMPUG00000016034) #13	C19orf44 (ENSMPUG00000016031) #14	CHERP (ENSMPUG00000016023) #15	SLC35E1 (ENSMPUG00000016022) #16	MED26 (ENSMPUG00000016021) #17	TMEM38A (ENSMPUG00000016018) #19	NWD1 (ENSMPUG00000016016) #20	SIN3B (ENSMPUG00000016012) #21	F2RL3 (ENSMPUG00000016009) #22	CPAMD8 (ENSMPUG00000015978) #23	HAUS8 (ENSMPUG00000015966) #24	MYO9B (ENSMPUG00000015959) #25	USE1 (ENSMPUG00000015933) #26	OCEL1 (ENSMPUG00000015927) #27	NR2F6 (ENSMPUG00000015918) #28	USHBP1 (ENSMPUG00000015913) #29	BABAM1 (ENSMPUG00000015909) #30	ANKLE1 (ENSMPUG00000015908) #31	ABHD8 (ENSMPUG00000015907) #32	MRPL34 (ENSMPUG00000015905) #33	DDA1 (ENSMPUG00000015904) #34	ENSMPUG00000019666	ANO8 (ENSMPUG00000015902) #35	GTPBP3 (ENSMPUG00000015889) #36
Canidae	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b.c.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.i.a.a ##34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b.c.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000009113.a.a.q.a.a	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.i.a.a ##34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Dog	MODERN SPECIES	12	RAB8A (ENSCAFG00845030471)	HSH2D (ENSCAFG00845030401) #7	CIB3 (ENSCAFG00845030374) #8	FAM32A (ENSCAFG00845030334) #9	AP1M1 (ENSCAFG00845030279) #10	KLF2 (ENSCAFG00845030239) #11	EPS15L1 (ENSCAFG00845030050) #12	CALR3 (ENSCAFG00845029913) #13	C19orf44 (ENSCAFG00845029896) #14	CHERP (ENSCAFG00845029857) #15	SLC35E1 (ENSCAFG00845029814) #16	MED26 (ENSCAFG00845029764) #17	TMEM38A (ENSCAFG00845029710) #19	NWD1 (ENSCAFG00845029689) #20	SIN3B (ENSCAFG00845029623) #21	F2RL3 (ENSCAFG00845029589) #22	CPAMD8 (ENSCAFG00845029496) #23	ENSCAFG00845029446	HAUS8 (ENSCAFG00845029375) #24	MYO9B (ENSCAFG00845028939) #25	USE1 (ENSCAFG00845028769) #26	OCEL1 (ENSCAFG00845028718) #27	NR2F6 (ENSCAFG00845028696) #28	USHBP1 (ENSCAFG00845028607) #29	BABAM1 (ENSCAFG00845028530) #30	ENSCAFG00845028449 #31	ABHD8 (ENSCAFG00845028391) #32	ANO8 (ENSCAFG00845028007) #35	GTPBP3 (ENSCAFG00845027819) #36	PLVAP (ENSCAFG00845027772) #37	CCDC194 (ENSCAFG00845027737)
Dingo	MODERN SPECIES	112	CIB3 (ENSCAFG00020009714) #8	ENSCAFG00020009726 #9	AP1M1 (ENSCAFG00020009738) #10	KLF2 (ENSCAFG00020009744) #11	EPS15L1 (ENSCAFG00020009751) #12	ENSCAFG00020009859 #13	ENSCAFG00020009884 #13	C19orf44 (ENSCAFG00020009908) #14	CHERP (ENSCAFG00020009941) #15	ENSCAFG00020010269 #16	MED26 (ENSCAFG00020010270) #17	ENSCAFG00020010274 #18	TMEM38A (ENSCAFG00020010277) #19	NWD1 (ENSCAFG00020010280) #20	SIN3B (ENSCAFG00020010296) #21	F2RL3 (ENSCAFG00020010307) #22	CPAMD8 (ENSCAFG00020010312) #23	ENSCAFG00020010340	HAUS8 (ENSCAFG00020010342) #24	MYO9B (ENSCAFG00020010355) #25	USE1 (ENSCAFG00020010388) #26	ENSCAFG00020010390 #27	NR2F6 (ENSCAFG00020010392) #28	USHBP1 (ENSCAFG00020010394) #29	BABAM1 (ENSCAFG00020010401) #30	ANKLE1 (ENSCAFG00020010402) #31	ABHD8 (ENSCAFG00020010409) #32	MRPL34 (ENSCAFG00020010412) #33	DDA1 (ENSCAFG00020010413) ##34	ANO8 (ENSCAFG00020010420) #35	GTPBP3 (ENSCAFG00020010423) #36
Red fox	MODERN SPECIES	5	ENSVVUG00000017179 #7	CIB3 (ENSVVUG00000017174) #8	FAM32A (ENSVVUG00000017167) #9	AP1M1 (ENSVVUG00000017156) #10	ENSVVUG00000017150	ENSVVUG00000017148 #11	EPS15L1 (ENSVVUG00000017079) #12	CALR3 (ENSVVUG00000016815) #13	CUNH19orf44 (ENSVVUG00000016796) #14	CHERP (ENSVVUG00000016546) #15	SLC35E1 (ENSVVUG00000016525) #16	MED26 (ENSVVUG00000016506) #17	TMEM38A (ENSVVUG00000016501) #19	NWD1 (ENSVVUG00000016498) #20	SIN3B (ENSVVUG00000016480) #21	ENSVVUG00000016472 #22	ENSVVUG00000016421 #23	HAUS8 (ENSVVUG00000016390) #24	MYO9B (ENSVVUG00000016277) #25	USE1 (ENSVVUG00000016217) #26	ENSVVUG00000016208 #27	NR2F6 (ENSVVUG00000016204) #28	USHBP1 (ENSVVUG00000016180) #29	BABAM1 (ENSVVUG00000016169) #30	ANKLE1 (ENSVVUG00000016162) #31	MRPL34 (ENSVVUG00000016159) #33	ABHD8 (ENSVVUG00000016154) #32	ENSVVUG00000016146 ##34	ANO8 (ENSVVUG00000016134) #35	GTPBP3 (ENSVVUG00000016125) #36	PLVAP (ENSVVUG00000016116) #37
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT01040000240876.a	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
leopard	MODERN SPECIES	68	HSH2D (ENSPPRG00000016653) #7	CIB3 (ENSPPRG00000014160) #8	FAM32A (ENSPPRG00000013338) #9	AP1M1 (ENSPPRG00000011710) #10	KLF2 (ENSPPRG00000010172) #11	EPS15L1 (ENSPPRG00000009628) #12	CALR3 (ENSPPRG00000003981) #13	C19orf44 (ENSPPRG00000003542) #14	CHERP (ENSPPRG00000003275) #15	SLC35E1 (ENSPPRG00000002839) #16	MED26 (ENSPPRG00000002137) #17	SMIM7 (ENSPPRG00000001938) #18	TMEM38A (ENSPPRG00000001060) #19	NWD1 (ENSPPRG00000000158) #20	SIN3B (ENSPPRG00000020039) #21	F2RL3 (ENSPPRG00000014972) #22	ENSPPRG00000014772 #23	ENSPPRG00000020051	HAUS8 (ENSPPRG00000013462) #24	MYO9B (ENSPPRG00000011490) #25	USE1 (ENSPPRG00000005292) #26	OCEL1 (ENSPPRG00000001849) #27	NR2F6 (ENSPPRG00000000990) #28	USHBP1 (ENSPPRG00000000237) #29	BABAM1 (ENSPPRG00000023343) #30	ANKLE1 (ENSPPRG00000018557) #31	ABHD8 (ENSPPRG00000015700) #32	MRPL34 (ENSPPRG00000015405) #33	ENSPPRG00000013674 #34	GTPBP3 (ENSPPRG00000010547) #36	PLVAP (ENSPPRG00000008926) #37
Cat	MODERN SPECIES	1	CIB3 (ENSFCAG00000009003) #8	FAM32A (ENSFCAG00000028032) #9	AP1M1 (ENSFCAG00000009006) #10	KLF2 (ENSFCAG00000043468) #11	EPS15L1 (ENSFCAG00000013169) #12	CALR3 (ENSFCAG00000036928) #13	CA2H19orf44 (ENSFCAG00000013171) #14	ENSFCAG00000053594	CHERP (ENSFCAG00000013172) #15	SLC35E1 (ENSFCAG00000013173) #16	MED26 (ENSFCAG00000022360) #17	SMIM7 (ENSFCAG00000016411) #18	TMEM38A (ENSFCAG00000024691) #19	NWD1 (ENSFCAG00000013175) #20	SIN3B (ENSFCAG00000001576) #21	F2RL3 (ENSFCAG00000001577) #22	CPAMD8 (ENSFCAG00000001578) #23	HAUS8 (ENSFCAG00000001579) #24	MYO9B (ENSFCAG00000000996) #25	USE1 (ENSFCAG00000000997) #26	OCEL1 (ENSFCAG00000000998) #27	NR2F6 (ENSFCAG00000000999) #28	USHBP1 (ENSFCAG00000001000) #29	BABAM1 (ENSFCAG00000044320) #30	ANKLE1 (ENSFCAG00000001003) #31	ABHD8 (ENSFCAG00000001005) #32	MRPL34 (ENSFCAG00000043549) #33	DDA1 (ENSFCAG00000001001) #34	ANO8 (ENSFCAG00000001006) #35	GTPBP3 (ENSFCAG00000001008) #36	PLVAP (ENSFCAG00000008511) #37
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37
Greater horseshoe bat	MODERN SPECIES	9	HSH2D (ENSRFEG00010012382) #7	CIB3 (ENSRFEG00010012404) #8	FAM32A (ENSRFEG00010012542) #9	AP1M1 (ENSRFEG00010012672) #10	KLF2 (ENSRFEG00010012949) #11	EPS15L1 (ENSRFEG00010013076) #12	CALR3 (ENSRFEG00010013317) #13	C19orf44 (ENSRFEG00010013371) #14	CHERP (ENSRFEG00010013631) #15	SLC35E1 (ENSRFEG00010013756) #16	MED26 (ENSRFEG00010013794) #17	ENSRFEG00010013962	TMEM38A (ENSRFEG00010014024) #19	NWD1 (ENSRFEG00010014152) #20	SIN3B (ENSRFEG00010015034) #21	F2RL3 (ENSRFEG00010015293) #22	ENSRFEG00010015376 #23	HAUS8 (ENSRFEG00010015413) #24	MYO9B (ENSRFEG00010015456) #25	USE1 (ENSRFEG00010015583) #26	OCEL1 (ENSRFEG00010015689) #27	NR2F6 (ENSRFEG00010015937) #28	USHBP1 (ENSRFEG00010016025) #29	BABAM1 (ENSRFEG00010016215) #30	ANKLE1 (ENSRFEG00010016433) #31	ABHD8 (ENSRFEG00010016451) #32	ENSRFEG00010016500 #33	DDA1 (ENSRFEG00010016565) #34	ANO8 (ENSRFEG00010016652) #35	GTPBP3 (ENSRFEG00010016703) #36	PLVAP (ENSRFEG00010016773) #37
Microbat	MODERN SPECIES	1217	RAB8A (ENSMLUG00000006982)	HSH2D (ENSMLUG00000016182) #7	CIB3 (ENSMLUG00000016192) #8	ENSMLUG00000000585 #9	AP1M1 (ENSMLUG00000000588) #10	EPS15L1 (ENSMLUG00000000595) #12	CALR3 (ENSMLUG00000013868) #13	C19orf44 (ENSMLUG00000013874) #14	CHERP (ENSMLUG00000013881) #15	SLC35E1 (ENSMLUG00000013892) #16	ENSMLUG00000013896 #17	SMIM7 (ENSMLUG00000030442) #18	TMEM38A (ENSMLUG00000013900) #19	NWD1 (ENSMLUG00000013904) #20	SIN3B (ENSMLUG00000013916) #21	F2RL3 (ENSMLUG00000013928) #22	CPAMD8 (ENSMLUG00000014332) #23	HAUS8 (ENSMLUG00000014347) #24	MYO9B (ENSMLUG00000014356) #25	USE1 (ENSMLUG00000014373) #26	ENSMLUG00000014378 #27	NR2F6 (ENSMLUG00000014386) #28	BABAM1 (ENSMLUG00000030550) #30	ANKLE1 (ENSMLUG00000029496) #31	ABHD8 (ENSMLUG00000003994) #32	ENSMLUG00000003993	DDA1 (ENSMLUG00000003990) #34	ANO8 (ENSMLUG00000010490) #35	GTPBP3 (ENSMLUG00000010529) #36
Megabat	MODERN SPECIES	3395						EPS15L1 (ENSPVAG00000004316) #12	CALR3 (ENSPVAG00000004318) #13	C19orf44 (ENSPVAG00000004319) #14	CHERP (ENSPVAG00000004320) #15	SLC35E1 (ENSPVAG00000004322) #16	MED26 (ENSPVAG00000004323) #17	SMIM7 (ENSPVAG00000004327) #18	TMEM38A (ENSPVAG00000004328) #19	NWD1 (ENSPVAG00000004329) #20	SIN3B (ENSPVAG00000004332) #21	F2RL3 (ENSPVAG00000004336) #22	CPAMD8 (ENSPVAG00000004337) #23
Equus	ANCESTRAL SPECIES	23	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811.b #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029.j #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00850000133633
Donkey	MODERN SPECIES		CIB3 (ENSEASG00005000199) #8	FAM32A (ENSEASG00005000261) #9	AP1M1 (ENSEASG00005025410) #10	ENSEASG00005034734 #11	ENSEASG00005000307	EPS15L1 (ENSEASG00005000338) #12	CALR3 (ENSEASG00005000358) #13	C19orf44 (ENSEASG00005000419) #14	CHERP (ENSEASG00005000428) #15	SLC35E1 (ENSEASG00005000435) #16	MED26 (ENSEASG00005000460) #17	ENSEASG00005028845 #18	TMEM38A (ENSEASG00005000479) #19	NWD1 (ENSEASG00005000508) #20	SIN3B (ENSEASG00005000531) #21	F2RL3 (ENSEASG00005000542) #22	HAUS8 (ENSEASG00005000554) #24	MYO9B (ENSEASG00005000735) #25	USE1 (ENSEASG00005002838) #26	ENSEASG00005034295 #27	NR2F6 (ENSEASG00005002847) #28	USHBP1 (ENSEASG00005002853) #29	BABAM1 (ENSEASG00005002859) #30	ANKLE1 (ENSEASG00005002868) #31	ENSEASG00005027125	ABHD8 (ENSEASG00005002873) #32	ENSEASG00005037977 #33	ENSEASG00005029028 #34	ANO8 (ENSEASG00005002893) #35	GTPBP3 (ENSEASG00005002907) #36	PLVAP (ENSEASG00005002913) #37
Horse	MODERN SPECIES	13	RAB8A (ENSECAG00000053880)	TPM4 (ENSECAG00000022254)	HSH2D (ENSECAG00000016757) #7	FAM32A (ENSECAG00000017554) #9	AP1M1 (ENSECAG00000019502) #10	KLF2 (ENSECAG00000036534) #11	EPS15L1 (ENSECAG00000019452) #12	C21H19orf44 (ENSECAG00000009448) #14	CHERP (ENSECAG00000012713) #15	SLC35E1 (ENSECAG00000007905) #16	MED26 (ENSECAG00000011280) #17	SMIM7 (ENSECAG00000026861) #18	TMEM38A (ENSECAG00000012297) #19	NWD1 (ENSECAG00000016197) #20	SIN3B (ENSECAG00000008366) #21	F2RL3 (ENSECAG00000003515) #22	HAUS8 (ENSECAG00000005865) #24	MYO9B (ENSECAG00000010919) #25	USE1 (ENSECAG00000018536) #26	OCEL1 (ENSECAG00000010782) #27	NR2F6 (ENSECAG00000035932) #28	USHBP1 (ENSECAG00000012156) #29	BABAM1 (ENSECAG00000017099) #30	ANKLE1 (ENSECAG00000000781) #31	ABHD8 (ENSECAG00000009051) #32	MRPL34 (ENSECAG00000048026) #33	ANO8 (ENSECAG00000014273) #35	DDA1 (ENSECAG00000011742) #34	GTPBP3 (ENSECAG00000018651) #36	PLVAP (ENSECAG00000022390) #37	CCDC194 (ENSECAG00000042865)
Atlantogenata	ANCESTRAL SPECIES	42	ENSGT00940000157246	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00390000013782
Afrotheria	ANCESTRAL SPECIES	45	ENSGT00940000157246	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00390000013782
Afrotheria_a	ANCESTRAL SPECIES	44	ENSGT00940000157246	ENSGT00940000161678 #7	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36	ENSGT00390000006166 #37	ENSGT00390000013782
Elephant	MODERN SPECIES	270	RAB8A (ENSLAFG00000004032)	ENSLAFG00000013758 #7	CIB3 (ENSLAFG00000013757) #8	FAM32A (ENSLAFG00000009394) #9	AP1M1 (ENSLAFG00000009395) #10	EPS15L1 (ENSLAFG00000023188) #12	CALR3 (ENSLAFG00000009094) #13	C19orf44 (ENSLAFG00000009095) #14	CHERP (ENSLAFG00000009096) #15	SLC35E1 (ENSLAFG00000009099) #16	MED26 (ENSLAFG00000028973) #17	SMIM7 (ENSLAFG00000020956) #18	TMEM38A (ENSLAFG00000029101) #19	NWD1 (ENSLAFG00000007110) #20	SIN3B (ENSLAFG00000007273) #21	F2RL3 (ENSLAFG00000022505) #22	HAUS8 (ENSLAFG00000017547) #24	MYO9B (ENSLAFG00000007351) #25	USE1 (ENSLAFG00000007366) #26	OCEL1 (ENSLAFG00000022373) #27	NR2F6 (ENSLAFG00000007367) #28	USHBP1 (ENSLAFG00000014079) #29	BABAM1 (ENSLAFG00000026019) #30	ANKLE1 (ENSLAFG00000012247) #31	ABHD8 (ENSLAFG00000012252) #32	MRPL34 (ENSLAFG00000012255) #33	DDA1 (ENSLAFG00000030569) #34	ANO8 (ENSLAFG00000030710) #35	GTPBP3 (ENSLAFG00000013978) #36	PLVAP (ENSLAFG00000026924) #37	ENSLAFG00000031751
Hyrax	MODERN SPECIES	9767																F2RL3 (ENSPCAG00000004542) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT01050000244840.A.b.a #22
Armadillo	MODERN SPECIES	4002																F2RL3 (ENSDNOG00000049664) #22	ENSDNOG00000038752
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000165052	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316 #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000165052	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316.a #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Diprotodontia	ANCESTRAL SPECIES	68	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000165052	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316.a #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000162475 #27	ENSGT00940000165052	ENSGT00940000160748 #28	ENSGT00530000063974.a #29	ENSGT00390000016934 #30	ENSGT00510000049316.a #31	ENSGT00390000007336 #32	ENSGT00390000012240 #33	ENSGT00390000007029 #34	ENSGT00940000157019 #35	ENSGT00390000016851 #36
koala	MODERN SPECIES	190	CIB3 (ENSPCIG00000009310) #8	FAM32A (ENSPCIG00000019649) #9	AP1M1 (ENSPCIG00000019644) #10	EPS15L1 (ENSPCIG00000019632) #12	ENSPCIG00000034808 #11	CALR3 (ENSPCIG00000019623) #13	ENSPCIG00000019616 #14	CHERP (ENSPCIG00000019615) #15	SLC35E1 (ENSPCIG00000019614) #16	MED26 (ENSPCIG00000019612) #17	SMIM7 (ENSPCIG00000019611) #18	TMEM38A (ENSPCIG00000019610) #19	ENSPCIG00000032012	NWD1 (ENSPCIG00000019608) #20	SIN3B (ENSPCIG00000019606) #21	F2RL3 (ENSPCIG00000019605) #22	ENSPCIG00000031252 #23	ENSPCIG00000019593 #24	MYO9B (ENSPCIG00000018481) #25	USE1 (ENSPCIG00000018427) #26	ENSPCIG00000018425 #27	ENSPCIG00000018424	NR2F6 (ENSPCIG00000018422) #28	ENSPCIG00000018416 #29	BABAM1 (ENSPCIG00000018414) #30	ENSPCIG00000036931 #31	ENSPCIG00000018411 #31	ABHD8 (ENSPCIG00000018410) #32	ENSPCIG00000033700 #33	ENSPCIG00000032495 #34	ANO8 (ENSPCIG00000018400) #35
Common wonbat	MODERN SPECIES	1141	CIB3 (ENSVURG00010010825) #8	FAM32A (ENSVURG00010010812) #9	AP1M1 (ENSVURG00010010801) #10	KLF2 (ENSVURG00010010792) #11	EPS15L1 (ENSVURG00010010717) #12	CALR3 (ENSVURG00010010676) #13	ENSVURG00010010663 #14	CHERP (ENSVURG00010010636) #15	SLC35E1 (ENSVURG00010010617) #16	MED26 (ENSVURG00010010603) #17	SMIM7 (ENSVURG00010010588) #18	TMEM38A (ENSVURG00010010577) #19	ENSVURG00010010568	NWD1 (ENSVURG00010010446) #20	SIN3B (ENSVURG00010010396) #21	F2RL3 (ENSVURG00010010385) #22	ENSVURG00010010371 #24	MYO9B (ENSVURG00010010244) #25	USE1 (ENSVURG00010010199) #26	ENSVURG00010010189 #27	ENSVURG00010010182	NR2F6 (ENSVURG00010010175) #28	ENSVURG00010010152 #29	BABAM1 (ENSVURG00010010126) #30	ENSVURG00010010112 #31	ABHD8 (ENSVURG00010010100) #32	ENSVURG00010010092 #33	ENSVURG00010010086	ENSVURG00010010076 #34	ANO8 (ENSVURG00010009955) #35	GTPBP3 (ENSVURG00010009927) #36
Tasmanian devil	MODERN SPECIES		RAB8A (ENSSHAG00000006491)	CIB3 (ENSSHAG00000007435) #8	FAM32A (ENSSHAG00000029761) #9	AP1M1 (ENSSHAG00000007792) #10	KLF2 (ENSSHAG00000027323) #11	EPS15L1 (ENSSHAG00000009699) #12	CALR3 (ENSSHAG00000010520) #13	ENSSHAG00000010638 #14	CHERP (ENSSHAG00000010752) #15	MED26 (ENSSHAG00000011089) #17	SMIM7 (ENSSHAG00000032265) #18	TMEM38A (ENSSHAG00000020699) #19	ENSSHAG00000023609	NWD1 (ENSSHAG00000001246) #20	SIN3B (ENSSHAG00000004536) #21	ENSSHAG00000006067 #22	CPAMD8 (ENSSHAG00000006276) #23	ENSSHAG00000009053 #24	MYO9B (ENSSHAG00000009506) #25	USE1 (ENSSHAG00000028409) #26	ENSSHAG00000025653 #27	ENSSHAG00000000218	NR2F6 (ENSSHAG00000031154) #28	ENSSHAG00000001406 #29	BABAM1 (ENSSHAG00000028466) #30	ENSSHAG00000023821 #31	ABHD8 (ENSSHAG00000029111) #32	ENSSHAG00000030827 #33	DDA1 (ENSSHAG00000031655) #34	ANO8 (ENSSHAG00000014548) #35	GTPBP3 (ENSSHAG00000022183) #36
Opossum	MODERN SPECIES	2	CIB3 (ENSMODG00000014899) #8	FAM32A (ENSMODG00000014904) #9	AP1M1 (ENSMODG00000014908) #10	ENSMODG00000039199	EPS15L1 (ENSMODG00000014917) #12	CALR3 (ENSMODG00000014922) #13	ENSMODG00000014929 #14	CHERP (ENSMODG00000014938) #15	SLC35E1 (ENSMODG00000014942) #16	MED26 (ENSMODG00000014944) #17	SMIM7 (ENSMODG00000050177) #18	TMEM38A (ENSMODG00000014946) #19	ENSMODG00000014949	NWD1 (ENSMODG00000014951) #20	SIN3B (ENSMODG00000014992) #21	ENSMODG00000014994 #22	CPAMD8 (ENSMODG00000015006) #23	ENSMODG00000047028	ENSMODG00000015021 #24	MYO9B (ENSMODG00000015036) #25	USE1 (ENSMODG00000015039) #26	ENSMODG00000015041 #27	ENSMODG00000015045	NR2F6 (ENSMODG00000015049) #28	ENSMODG00000015061 #29	BABAM1 (ENSMODG00000015070) #30	ENSMODG00000037689	ABHD8 (ENSMODG00000015077) #32	ENSMODG00000038440 #33	DDA1 (ENSMODG00000043860) #34	ANO8 (ENSMODG00000015094) #35
Platypus	MODERN SPECIES	84	CIB3 (ENSOANG00000012801) #8	FAM32A (ENSOANG00000037684) #9	AP1M1 (ENSOANG00000042206) #10	KLF2 (ENSOANG00000014443) #11	EPS15L1 (ENSOANG00000003714) #12	ENSOANG00000049384 #13	ENSOANG00000007244 #14	CHERP (ENSOANG00000045953) #15	SLC35E1 (ENSOANG00000042325) #16	ENSOANG00000013449 #17	SMIM7 (ENSOANG00000047213) #18	TMEM38A (ENSOANG00000007866) #19	ENSOANG00000007867	NWD1 (ENSOANG00000007868) #20	SIN3B (ENSOANG00000013064) #21	ENSOANG00000013065 #22	CPAMD8 (ENSOANG00000013066) #23	ENSOANG00000019897 #24	MYO9B (ENSOANG00000008686) #25	USE1 (ENSOANG00000049806) #26	INSR (ENSOANG00000002002)	ENSOANG00000047277	ARHGEF18 (ENSOANG00000009603)	ENSOANG00000005191	PEX11G (ENSOANG00000013450)	ENSOANG00000004760	ARRDC2 (ENSOANG00000013069)	ENSOANG00000001288	MAST3 (ENSOANG00000001293)	PIK3R2 (ENSOANG00000001300)	ENSOANG00000001305
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Chinese turtle	MODERN SPECIES	1045			CIB3 (ENSPSIG00000016390) #8	AP1M1 (ENSPSIG00000015763) #10	ENSPSIG00000015757	EPS15L1 (ENSPSIG00000014047) #12	CALR3 (ENSPSIG00000013549) #13	C19orf44 (ENSPSIG00000013423) #14	CHERP (ENSPSIG00000011974) #15	SLC35E1 (ENSPSIG00000011843) #16	MED26 (ENSPSIG00000011647) #17	TMEM38A (ENSPSIG00000011588) #19	ENSPSIG00000010977	NWD1 (ENSPSIG00000010426) #20	SIN3B (ENSPSIG00000008402) #21	F2RL3 (ENSPSIG00000008320) #22	CPAMD8 (ENSPSIG00000007510) #23	ENSPSIG00000007045	ELAVL1 (ENSPSIG00000013736)
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	771	AP1M1 (ENSCPBG00000015037) #10	TPM4 (ENSCPBG00000015030)	RAB8A (ENSCPBG00000015027)	CIB3 (ENSCPBG00000015022) #8	ENSCPBG00000015018	EPS15L1 (ENSCPBG00000015007) #12	CALR3 (ENSCPBG00000014982) #13	C19orf44 (ENSCPBG00000014974) #14	CHERP (ENSCPBG00000014970) #15	SLC35E1 (ENSCPBG00000014966) #16	MED26 (ENSCPBG00000014964) #17	SMIM7 (ENSCPBG00000014961) #18	TMEM38A (ENSCPBG00000014959) #19	NWD1 (ENSCPBG00000014938) #20	SIN3B (ENSCPBG00000014932) #21	F2RL3 (ENSCPBG00000014930) #22	CPAMD8 (ENSCPBG00000014917) #23	HAUS8 (ENSCPBG00000014909) #24	MYO9B (ENSCPBG00000014216) #25	USE1 (ENSCPBG00000014174) #26	INSR (ENSCPBG00000013065)	ARHGEF18 (ENSCPBG00000012967)	ENSCPBG00000012964	ENSCPBG00000012961	ARRDC2 (ENSCPBG00000012959)	ENSCPBG00000012956	MAST3 (ENSCPBG00000012946)	PIK3R2 (ENSCPBG00000012939)	IFI30 (ENSCPBG00000012937)	MPV17L2 (ENSCPBG00000012933)	RAB3A (ENSCPBG00000012930)
painted turtle	MODERN SPECIES	739	ENSCPBG00000007870	ENSCPBG00000007874	ENSCPBG00000007879	ENSCPBG00000007888	ENSCPBG00000007900	ENSCPBG00000008043	PCDHGC5 (ENSCPBG00000008057)	ENSCPBG00000008073	ENSCPBG00000008080	ENSCPBG00000008082	ENSCPBG00000008084	DIAPH1 (ENSCPBG00000008131)	HDAC3 (ENSCPBG00000008391)	RELL2 (ENSCPBG00000008403)	FCHSD1 (ENSCPBG00000008411)	ENSCPBG00000008418 #22	ENSCPBG00000008422	ARAP3 (ENSCPBG00000008435)	ENSCPBG00000008467	ENSCPBG00000008475	DELE1 (ENSCPBG00000008481)	PCDH12 (ENSCPBG00000008490)	RGS5 (ENSCPBG00000008497)	RGS4 (ENSCPBG00000008501)	ENSCPBG00000008507
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	92	RAB8A (ENSTMTG00000005187)	CIB3 (ENSTMTG00000005210) #8	FAM32A (ENSTMTG00000005230) #9	AP1M1 (ENSTMTG00000005242) #10	ENSTMTG00000005277	EPS15L1 (ENSTMTG00000005574) #12	CALR3 (ENSTMTG00000010255) #13	ENSTMTG00000010292	CHERP (ENSTMTG00000010306) #15	SLC35E1 (ENSTMTG00000010322) #16	MED26 (ENSTMTG00000010343) #17	TMEM38A (ENSTMTG00000010365) #19	ENSTMTG00000010464	NWD1 (ENSTMTG00000010502) #20	SIN3B (ENSTMTG00000010646) #21	F2RL3 (ENSTMTG00000010698) #22	CPAMD8 (ENSTMTG00000010720) #23	HAUS8 (ENSTMTG00000010855) #24	MYO9B (ENSTMTG00000010895) #25	USE1 (ENSTMTG00000011087) #26	INSR (ENSTMTG00000011119)	ENSTMTG00000011196	ARHGEF18 (ENSTMTG00000011217)	ENSTMTG00000011265	PEX11G (ENSTMTG00000011272)	ARRDC2 (ENSTMTG00000011291)	MAST3 (ENSTMTG00000011391)	PIK3R2 (ENSTMTG00000012134)	IFI30 (ENSTMTG00000012174)	MPV17L2 (ENSTMTG00000012198)	RAB3A (ENSTMTG00000012226)
Three-toed box turtle	MODERN SPECIES	751																ENSTMTG00000011304 #22
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	14	RAB8A (ENSGEVG00005014211)	CIB3 (ENSGEVG00005014229) #8	FAM32A (ENSGEVG00005014273) #9	AP1M1 (ENSGEVG00005014343) #10	ENSGEVG00005014693	EPS15L1 (ENSGEVG00005015080) #12	CALR3 (ENSGEVG00005016752) #13	C19orf44 (ENSGEVG00005016875) #14	CHERP (ENSGEVG00005016897) #15	SLC35E1 (ENSGEVG00005016933) #16	MED26 (ENSGEVG00005016975) #17	SMIM7 (ENSGEVG00005016994) #18	TMEM38A (ENSGEVG00005017010) #19	NWD1 (ENSGEVG00005017068) #20	SIN3B (ENSGEVG00005017238) #21	F2RL3 (ENSGEVG00005017263) #22	CPAMD8 (ENSGEVG00005017342) #23	MYO9B (ENSGEVG00005017707) #25	USE1 (ENSGEVG00005018461) #26	INSR (ENSGEVG00005018487)	ARHGEF18 (ENSGEVG00005018537)	ENSGEVG00005018609	PEX11G (ENSGEVG00005018620)	ARRDC2 (ENSGEVG00005018645)	ENSGEVG00005018680	MAST3 (ENSGEVG00005018711)	PIK3R2 (ENSGEVG00005018788)	IFI30 (ENSGEVG00005018820)	MPV17L2 (ENSGEVG00005018840)	ENSGEVG00005018855	RAB3A (ENSGEVG00005018864)
Goode s thornscrub tortoise	MODERN SPECIES	22	ENSGEVG00005018263	ENSGEVG00005018283	ENSGEVG00005018303	ENSGEVG00005018324	ENSGEVG00005018354	ENSGEVG00005018392	ENSGEVG00005018479	PCDHGC3 (ENSGEVG00005018579)	ENSGEVG00005018599	PCDHGC5 (ENSGEVG00005018617)	ENSGEVG00005018631	ENSGEVG00005018660	HDAC3 (ENSGEVG00005018950)	ENSGEVG00005018972	FCHSD1 (ENSGEVG00005018993)	ENSGEVG00005019034 #22	ARAP3 (ENSGEVG00005019106)	ENSGEVG00005019327	ENSGEVG00005019351	ENSGEVG00005019357	ENSGEVG00005019378	DELE1 (ENSGEVG00005004039)	ENSGEVG00005004123	ENSGEVG00005004131	PCDH12 (ENSGEVG00005004148)	ENSGEVG00005004184	RGS5 (ENSGEVG00005004212)	RGS4 (ENSGEVG00005004231)	SELP (ENSGEVG00005004306)	ATF6 (ENSGEVG00005004476)	OLFML2B (ENSGEVG00005004519)
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	897														NWD1 (ENSCABG00000018369) #20	SIN3B (ENSCABG00000018314) #21	F2RL3 (ENSCABG00000018311) #22	ENSCABG00000018307 #23	HAUS8 (ENSCABG00000018304) #24	MYO9B (ENSCABG00000016450) #25	USE1 (ENSCABG00000016422) #26	INSR (ENSCABG00000016421)	ARHGEF18 (ENSCABG00000016420)	ENSCABG00000016419	PEX11G (ENSCABG00000016417)	TEX45 (ENSCABG00000016416)	ARRDC2 (ENSCABG00000016415)	MAST3 (ENSCABG00000016409)	PIK3R2 (ENSCABG00000016368)	IFI30 (ENSCABG00000016346)	MPV17L2 (ENSCABG00000016336)	RAB3A (ENSCABG00000016331)
Abingdon island giant tortoise	MODERN SPECIES	321														ENSCABG00000018643	FCHSD1 (ENSCABG00000018645)	ENSCABG00000018648 #22	ARAP3 (ENSCABG00000018653)	ENSCABG00000018666
Archosauria	ANCESTRAL SPECIES	16	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Aves	ANCESTRAL SPECIES	20	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
African ostrich	DUPLICATION
African ostrich	MODERN SPECIES	180	ENSSCUG00000001883	RAB8A (ENSSCUG00000001886)	CIB3 (ENSSCUG00000001888) #8	AP1M1 (ENSSCUG00000001891) #10	ENSSCUG00000001893	EPS15L1 (ENSSCUG00000001905) #12	CALR3 (ENSSCUG00000001962) #13	ENSSCUG00000001965 #14	CHERP (ENSSCUG00000001967) #15	SLC35E1 (ENSSCUG00000001971) #16	MED26 (ENSSCUG00000001974) #17	SMIM7 (ENSSCUG00000001978) #18	TMEM38A (ENSSCUG00000001980) #19	NWD1 (ENSSCUG00000001988) #20	SIN3B (ENSSCUG00000002001) #21	F2RL3 (ENSSCUG00000002004) #22	ENSSCUG00000002005 #23	HAUS8 (ENSSCUG00000002008) #24	MYO9B (ENSSCUG00000002014) #25	USE1 (ENSSCUG00000002029) #26	INSR (ENSSCUG00000002032)	ARHGEF18 (ENSSCUG00000002036)	ENSSCUG00000002046	ENSSCUG00000002047	ARRDC2 (ENSSCUG00000002052)
African ostrich	MODERN SPECIES	257								PCDHGC3 (ENSSCUG00000004250)	ENSSCUG00000004251	ENSSCUG00000004253	ENSSCUG00000004255	DIAPH1 (ENSSCUG00000004278)	HDAC3 (ENSSCUG00000004318)	RELL2 (ENSSCUG00000004321)	FCHSD1 (ENSSCUG00000004324)	ENSSCUG00000004332 #22	ARAP3 (ENSSCUG00000004334)	ENSSCUG00000004339	PCDH1 (ENSSCUG00000004343)	DELE1 (ENSSCUG00000004349)	PCDH12 (ENSSCUG00000004351)	ECSCR (ENSSCUG00000004352)	DNAJC18 (ENSSCUG00000004353)	ENSSCUG00000004354	SLC23A1 (ENSSCUG00000004355)	PAIP2 (ENSSCUG00000004356)	MATR3 (ENSSCUG00000004357)	SIL1 (ENSSCUG00000004362)	CTNNA1 (ENSSCUG00000004363)	LRRTM2 (ENSSCUG00000004364)	HSPA9 (ENSSCUG00000004385)
Neognathae	ANCESTRAL SPECIES	21	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492
Golden eagle	MODERN SPECIES	3	RAB8A (ENSACCG00020012160)	CIB3 (ENSACCG00020012134) #8	FAM32A (ENSACCG00020012083) #9	AP1M1 (ENSACCG00020012076) #10	ENSACCG00020012058	EPS15L1 (ENSACCG00020011983) #12	CALR3 (ENSACCG00020011798) #13	C19orf44 (ENSACCG00020011769) #14	CHERP (ENSACCG00020011736) #15	SLC35E1 (ENSACCG00020011685) #16	MED26 (ENSACCG00020011662) #17	SMIM7 (ENSACCG00020011633) #18	TMEM38A (ENSACCG00020011612) #19	ENSACCG00020011593 #20	SIN3B (ENSACCG00020011471) #21	F2RL3 (ENSACCG00020011442) #22	CPAMD8 (ENSACCG00020007102) #23	HAUS8 (ENSACCG00020007063) #24	MYO9B (ENSACCG00020006996) #25	USE1 (ENSACCG00020006959) #26	INSR (ENSACCG00020006932)	ENSACCG00020006918	ARHGEF18 (ENSACCG00020006875)	ENSACCG00020006793	ARRDC2 (ENSACCG00020006771)	MAST3 (ENSACCG00020006703)	PIK3R2 (ENSACCG00020006658)	IFI30 (ENSACCG00020006634)	MPV17L2 (ENSACCG00020006616)	RAB3A (ENSACCG00020006602)	ENSACCG00020006565
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	13	RAB8A (ENSSHBG00005018586)	CIB3 (ENSSHBG00005018583) #8	FAM32A (ENSSHBG00005018578) #9	AP1M1 (ENSSHBG00005018575) #10	ENSSHBG00005018572	EPS15L1 (ENSSHBG00005018556) #12	CALR3 (ENSSHBG00005018541) #13	C19orf44 (ENSSHBG00005018538) #14	CHERP (ENSSHBG00005018536) #15	SLC35E1 (ENSSHBG00005018530) #16	MED26 (ENSSHBG00005018529) #17	TMEM38A (ENSSHBG00005018528) #19	ENSSHBG00005018526	SMIM7 (ENSSHBG00005018524) #18	SIN3B (ENSSHBG00005018521) #21	F2RL3 (ENSSHBG00005018516) #22	CPAMD8 (ENSSHBG00005018501) #23	HAUS8 (ENSSHBG00005018488) #24	MYO9B (ENSSHBG00005017297) #25	USE1 (ENSSHBG00005017255) #26	ENSSHBG00005017251	ENSSHBG00005017248	LSM7 (ENSSHBG00005017245)	SPPL2B (ENSSHBG00005017241)	ENSSHBG00005017183	ENSSHBG00005017173	ENSSHBG00005017170	TIMM13 (ENSSHBG00005017163)	LMNB2 (ENSSHBG00005017159)	HNRNPM (ENSSHBG00005017146)	TIMM44 (ENSSHBG00005017134)
Kakapo	MODERN SPECIES	6	ENSSHBG00005012241	ENSSHBG00005012284	PCDHGC4 (ENSSHBG00005012333)	ENSSHBG00005012370	ENSSHBG00005012382	ENSSHBG00005012432	ENSSHBG00005012445	ENSSHBG00005012478	ENSSHBG00005012504	ENSSHBG00005012530	ENSSHBG00005012546	PCDHGC5 (ENSSHBG00005012559)	HDAC3 (ENSSHBG00005012573)	RELL2 (ENSSHBG00005012600)	FCHSD1 (ENSSHBG00005012625)	ENSSHBG00005012649 #22	ENSSHBG00005012666	ENSSHBG00005012717	ENSSHBG00005012795	PCDH1 (ENSSHBG00005013320)	DELE1 (ENSSHBG00005013335)	PCDH12 (ENSSHBG00005013344)	ENSSHBG00005013356	ECSCR (ENSSHBG00005013367)	DNAJC18 (ENSSHBG00005013376)	ENSSHBG00005013389	ENSSHBG00005013475	SLC23A1 (ENSSHBG00005013488)	PAIP2 (ENSSHBG00005013514)	ENSSHBG00005013527	MATR3 (ENSSHBG00005013551)
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000154146.b.b.b	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00940000161033	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B	ENSGT00500000044945.a	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361 #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	21	GNA11 (ENSTGUG00000000541)	ENSTGUG00000018462	ENSTGUG00000000525	S1PR4 (ENSTGUG00000029330)	NCLN (ENSTGUG00000000519)	ENSTGUG00000000514	HSD11B1L (ENSTGUG00000000510)	MICOS13 (ENSTGUG00000000509)	ENSTGUG00000000502	ENSTGUG00000000489	SLC35E1 (ENSTGUG00000021589) #16	MED26 (ENSTGUG00000025288) #17	ENSTGUG00000000482 #18	TMEM38A (ENSTGUG00000000480) #19	SIN3B (ENSTGUG00000000474) #21	F2RL3 (ENSTGUG00000000473) #22	CPAMD8 (ENSTGUG00000000470) #23	HAUS8 (ENSTGUG00000000469) #24	MYO9B (ENSTGUG00000000453) #25	USE1 (ENSTGUG00000000443) #26	INSR (ENSTGUG00000000426)	ARHGEF18 (ENSTGUG00000000416)	ENSTGUG00000000415	PEX11G (ENSTGUG00000026140)	ARRDC2 (ENSTGUG00000000411)	ENSTGUG00000026934	MAST3 (ENSTGUG00000000403)	PIK3R2 (ENSTGUG00000000392)	IFI30 (ENSTGUG00000000388)	RFX2 (ENSTGUG00000000369)	ACSBG2 (ENSTGUG00000000363)
Zebra finch	MODERN SPECIES	4	ENSTGUG00000026948	ENSTGUG00000018535	ENSTGUG00000019748	ENSTGUG00000020402	ENSTGUG00000019536	ENSTGUG00000020482	ENSTGUG00000027988	ENSTGUG00000028562	ENSTGUG00000022046	ENSTGUG00000023742	ENSTGUG00000026857	ENSTGUG00000001702	HDAC3 (ENSTGUG00000015013)	RELL2 (ENSTGUG00000025939)	FCHSD1 (ENSTGUG00000015068)	ENSTGUG00000015072 #22	ARAP3 (ENSTGUG00000015074)	ENSTGUG00000027381	PDLIM4 (ENSTGUG00000001365)	ENSTGUG00000001369	P4HA2 (ENSTGUG00000001347)	ENSTGUG00000001346	ENSTGUG00000001326	ENSTGUG00000001321	FNIP1 (ENSTGUG00000001315)	RAPGEF6 (ENSTGUG00000001310)	ENSTGUG00000020111	FSTL4 (ENSTGUG00000001305)	C5orf15 (ENSTGUG00000001302)	VDAC1 (ENSTGUG00000001300)	TCF7 (ENSTGUG00000001295)
Common canary	DUPLICATION
Common canary	MODERN SPECIES	44	ENSSCAG00000005529	S1PR4 (ENSSCAG00000005525)	NCLN (ENSSCAG00000005389)	CELF5 (ENSSCAG00000005358)	ENSSCAG00000005353	ENSSCAG00000005350	ENSSCAG00000005346	ENSSCAG00000004187	ENSSCAG00000003995	ENSSCAG00000003979	SLC35E1 (ENSSCAG00000003963) #16	MED26 (ENSSCAG00000003956) #17	SMIM7 (ENSSCAG00000003955) #18	TMEM38A (ENSSCAG00000003949) #19	SIN3B (ENSSCAG00000003943) #21	F2RL3 (ENSSCAG00000003938) #22	CPAMD8 (ENSSCAG00000003920) #23	HAUS8 (ENSSCAG00000003910) #24	MYO9B (ENSSCAG00000003623) #25	USE1 (ENSSCAG00000003564) #26	INSR (ENSSCAG00000003553)	ENSSCAG00000003545	ARHGEF18 (ENSSCAG00000003534)	ENSSCAG00000003532	PEX11G (ENSSCAG00000003522)	ARRDC2 (ENSSCAG00000003515)	MAST3 (ENSSCAG00000002920)	PIK3R2 (ENSSCAG00000002784)	IFI30 (ENSSCAG00000002724)	ENSSCAG00000002698	RFX2 (ENSSCAG00000002695)
Common canary	MODERN SPECIES	16	ENSSCAG00000008631	ENSSCAG00000008628	ENSSCAG00000008624	ENSSCAG00000008620	ENSSCAG00000008619	ENSSCAG00000008614	ENSSCAG00000008608	ENSSCAG00000008605	ENSSCAG00000008602	ENSSCAG00000008600	PCDHGC3 (ENSSCAG00000008596)	PCDHGC4 (ENSSCAG00000008589)	HDAC3 (ENSSCAG00000008583)	RELL2 (ENSSCAG00000008578)	FCHSD1 (ENSSCAG00000008572)	ENSSCAG00000008567 #22	ARAP3 (ENSSCAG00000008406)	ENSSCAG00000008346	PCDH1 (ENSSCAG00000008340)	ENSSCAG00000008334	ENSSCAG00000008332	ENSSCAG00000008326	ENSSCAG00000008320	ENSSCAG00000008314	ENSSCAG00000008299
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	194	GNA11 (ENSGFOG00000006146)	ENSGFOG00000006115	S1PR4 (ENSGFOG00000006094)	NCLN (ENSGFOG00000006078)	ENSGFOG00000006073	CELF5 (ENSGFOG00000006068)	HSD11B1L (ENSGFOG00000006061)	MICOS13 (ENSGFOG00000006055)	ENSGFOG00000006037	ENSGFOG00000006021	SLC35E1 (ENSGFOG00000006003) #16	MED26 (ENSGFOG00000005994) #17	SMIM7 (ENSGFOG00000005990) #18	TMEM38A (ENSGFOG00000005982) #19	SIN3B (ENSGFOG00000005962) #21	F2RL3 (ENSGFOG00000005953) #22	CPAMD8 (ENSGFOG00000005875) #23
Medium ground finch	MODERN SPECIES	234													HDAC3 (ENSGFOG00000006459)	RELL2 (ENSGFOG00000006453)	FCHSD1 (ENSGFOG00000006213)	ENSGFOG00000006175 #22	ARAP3 (ENSGFOG00000006004)	ENSGFOG00000005979	PCDH1 (ENSGFOG00000005967)	DELE1 (ENSGFOG00000005960)	PCDH12 (ENSGFOG00000005938)	ENSGFOG00000005936	ECSCR (ENSGFOG00000005924)	DNAJC18 (ENSGFOG00000005914)	PAIP2 (ENSGFOG00000005909)	MATR3 (ENSGFOG00000005894)
Flycatcher	DUPLICATION
Flycatcher	MODERN SPECIES	20	ENSFALG00000026809	ENSFALG00000013891	ENSFALG00000013890	S1PR4 (ENSFALG00000013889)	NCLN (ENSFALG00000013887)	CELF5 (ENSFALG00000013886)	ENSFALG00000013885	ENSFALG00000027254	ENSFALG00000013882	ENSFALG00000013881	SLC35E1 (ENSFALG00000023928) #16	MED26 (ENSFALG00000013876) #17	ENSFALG00000028164 #18	TMEM38A (ENSFALG00000013872) #19	SIN3B (ENSFALG00000013869) #21	F2RL3 (ENSFALG00000013868) #22	CPAMD8 (ENSFALG00000013860) #23	HAUS8 (ENSFALG00000013857) #24	MYO9B (ENSFALG00000013855) #25	USE1 (ENSFALG00000026213) #26	ENSFALG00000013853	ENSFALG00000026675	ENSFALG00000013852	ENSFALG00000013850	ENSFALG00000023440	ARRDC2 (ENSFALG00000013849)	MAST3 (ENSFALG00000013842)	PIK3R2 (ENSFALG00000013839)	IFI30 (ENSFALG00000013837)	ENSFALG00000013834	ENSFALG00000026674
Flycatcher	MODERN SPECIES	4	ENSFALG00000014138	ENSFALG00000013458	RAD50 (ENSFALG00000013456)	ENSFALG00000025112	IRF1 (ENSFALG00000028567)	ENSFALG00000014137	ENSFALG00000023998	ENSFALG00000028868	PCDHGC4 (ENSFALG00000002847)	ENSFALG00000015011	ENSFALG00000002835	PCDHGC5 (ENSFALG00000023289)	HDAC3 (ENSFALG00000002877)	RELL2 (ENSFALG00000002888)	FCHSD1 (ENSFALG00000002891)	ENSFALG00000028840 #22	ARAP3 (ENSFALG00000002912)	ENSFALG00000002941	ENSFALG00000028413	ENSFALG00000026492	ENSFALG00000002948	DELE1 (ENSFALG00000002953)	ENSFALG00000002957	ENSFALG00000026369	DNAJC18 (ENSFALG00000026251)	ENSFALG00000002984	SLC23A1 (ENSFALG00000003008)	PAIP2 (ENSFALG00000027530)	MATR3 (ENSFALG00000003071)	SIL1 (ENSFALG00000003094)	CTNNA1 (ENSFALG00000003106)
Great tit	DUPLICATION
Great tit	MODERN SPECIES	21	GNA11 (ENSPMJG00000010893)	ENSPMJG00000010892	ENSPMJG00000010891	S1PR4 (ENSPMJG00000010890)	NCLN (ENSPMJG00000010889)	CELF5 (ENSPMJG00000010888)	ENSPMJG00000010887	MICOS13 (ENSPMJG00000010875)	ENSPMJG00000010874	ENSPMJG00000010873	SLC35E1 (ENSPMJG00000010872) #16	MED26 (ENSPMJG00000010871) #17	SMIM7 (ENSPMJG00000010869) #18	TMEM38A (ENSPMJG00000010867) #19	SIN3B (ENSPMJG00000010861) #21	F2RL3 (ENSPMJG00000010859) #22	CPAMD8 (ENSPMJG00000010852) #23	HAUS8 (ENSPMJG00000010850) #24	MYO9B (ENSPMJG00000010846) #25	USE1 (ENSPMJG00000010845) #26	INSR (ENSPMJG00000010844)	ENSPMJG00000010842	ARHGEF18 (ENSPMJG00000010837)	ENSPMJG00000010836	PEX11G (ENSPMJG00000010835)	ARRDC2 (ENSPMJG00000010834)	ENSPMJG00000010833	MAST3 (ENSPMJG00000010830)	PIK3R2 (ENSPMJG00000010829)	IFI30 (ENSPMJG00000010828)	RFX2 (ENSPMJG00000010657)
Great tit	MODERN SPECIES	4	SLC4A9 (ENSPMJG00000000108)	ENSPMJG00000000384	ANKHD1 (ENSPMJG00000000454)	SRA1 (ENSPMJG00000007965)	APBB3 (ENSPMJG00000007966)	ENSPMJG00000007968	ZMAT2 (ENSPMJG00000007974)	ENSPMJG00000007975	ENSPMJG00000007976	ENSPMJG00000008015	ENSPMJG00000008018	PCDHGC5 (ENSPMJG00000008025)	HDAC3 (ENSPMJG00000008036)	RELL2 (ENSPMJG00000008040)	FCHSD1 (ENSPMJG00000008043)	ENSPMJG00000008052 #22	ARAP3 (ENSPMJG00000008055)	ENSPMJG00000008060	ENSPMJG00000008061	ENSPMJG00000008062	PCDH1 (ENSPMJG00000008064)	ENSPMJG00000008086	PCDH12 (ENSPMJG00000008087)	ENSPMJG00000008088	ECSCR (ENSPMJG00000008089)	PAIP2 (ENSPMJG00000008090)	DNAJC18 (ENSPMJG00000008091)	ENSPMJG00000008092	ENSPMJG00000008095	SLC23A1 (ENSPMJG00000008097)	MATR3 (ENSPMJG00000008098)
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361.c #26	ENSGT00390000014361.d #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450
Anatidae	ANCESTRAL SPECIES	62	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361.c #26	ENSGT00390000014361.d #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00390000014215	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Pink-footed goose	DUPLICATION
Pink-footed goose	MODERN SPECIES	221	RAB8A (ENSABRG00000015512)	CIB3 (ENSABRG00000015507) #8	FAM32A (ENSABRG00000015504) #9	AP1M1 (ENSABRG00000015258) #10	ENSABRG00000015228	EPS15L1 (ENSABRG00000012667) #12	CALR3 (ENSABRG00000012473) #13	ENSABRG00000012464 #14	CHERP (ENSABRG00000012412) #15	SLC35E1 (ENSABRG00000012348) #16	MED26 (ENSABRG00000012342) #17	SMIM7 (ENSABRG00000012337) #18	TMEM38A (ENSABRG00000012328) #19	NWD1 (ENSABRG00000012111) #20	SIN3B (ENSABRG00000012013) #21	F2RL3 (ENSABRG00000011995) #22	ENSABRG00000011963 #23	ENSABRG00000011941	MYO9B (ENSABRG00000008759) #25	ENSABRG00000008482 #26	ENSABRG00000008470 #26	INSR (ENSABRG00000004285)	ARHGEF18 (ENSABRG00000003820)	ENSABRG00000003818	PEX11G (ENSABRG00000003816)	ARRDC2 (ENSABRG00000003384)	MAST3 (ENSABRG00000001985)	PIK3R2 (ENSABRG00000001767)	IFI30 (ENSABRG00000001719)	MPV17L2 (ENSABRG00000001672)	ENSABRG00000001610
Pink-footed goose	MODERN SPECIES	51							ENSABRG00000000418	ENSABRG00000000392	ENSABRG00000000381	ENSABRG00000000374	PCDHGC5 (ENSABRG00000000356)	PCDHGC3 (ENSABRG00000021785)	HDAC3 (ENSABRG00000021775)	RELL2 (ENSABRG00000021772)	FCHSD1 (ENSABRG00000021767)	ENSABRG00000021763 #22	ARAP3 (ENSABRG00000021640)	ENSABRG00000021622	ENSABRG00000021618	PCDH1 (ENSABRG00000021614)	DELE1 (ENSABRG00000021601)	PCDH12 (ENSABRG00000021599)	ENSABRG00000021592	DNAJC18 (ENSABRG00000021586)	MZB1 (ENSABRG00000021581)	SLC23A1 (ENSABRG00000021513)	PAIP2 (ENSABRG00000021499)	MATR3 (ENSABRG00000021495)	SIL1 (ENSABRG00000021487)	LRRTM2 (ENSABRG00000021479)	ENSABRG00000021475
Duck	DUPLICATION
Duck	MODERN SPECIES	20	ENSAPLG00000020730	TPM4 (ENSAPLG00000027602)	RAB8A (ENSAPLG00000008784)	CIB3 (ENSAPLG00000008953) #8	FAM32A (ENSAPLG00000009058) #9	AP1M1 (ENSAPLG00000009067) #10	ENSAPLG00000009602	EPS15L1 (ENSAPLG00000009655) #12	CALR3 (ENSAPLG00000010728) #13	C19orf44 (ENSAPLG00000010741) #14	CHERP (ENSAPLG00000010773) #15	SLC35E1 (ENSAPLG00000011233) #16	MED26 (ENSAPLG00000011240) #17	TMEM38A (ENSAPLG00000024207) #19	SIN3B (ENSAPLG00000011724) #21	F2RL3 (ENSAPLG00000012122) #22	ENSAPLG00000012206 #23	HAUS8 (ENSAPLG00000012957) #24	MYO9B (ENSAPLG00000013123) #25	ENSAPLG00000021258 #26	ENSAPLG00000025695 #26	INSR (ENSAPLG00000014259)	ARHGEF18 (ENSAPLG00000015732)	ENSAPLG00000001869	PGPEP1 (ENSAPLG00000007370)	ELL (ENSAPLG00000006360)	KLHL26 (ENSAPLG00000011078)	CRTC1 (ENSAPLG00000010657)	ENSAPLG00000009709	UPF1 (ENSAPLG00000009175)	ENSAPLG00000009148
Duck	MODERN SPECIES	5	ENSAPLG00000023692	PCDHAC2 (ENSAPLG00000003839)	PCDHAC1 (ENSAPLG00000029593)	ENSAPLG00000021486	ENSAPLG00000027449	ENSAPLG00000004083	PCDHB3 (ENSAPLG00000029860)	PCDHGC5 (ENSAPLG00000020916)	ENSAPLG00000019666	ENSAPLG00000020510	ENSAPLG00000004903	ENSAPLG00000005060	RELL2 (ENSAPLG00000005508)	ENSAPLG00000005657	ENSAPLG00000030057	ENSAPLG00000001544 #22	ARAP3 (ENSAPLG00000005934)	ENSAPLG00000006514	PCDH1 (ENSAPLG00000007472)	DELE1 (ENSAPLG00000007579)	PCDH12 (ENSAPLG00000007583)	ENSAPLG00000029121	ENSAPLG00000017467	ENSAPLG00000030244	SLC23A1 (ENSAPLG00000008074)	PAIP2 (ENSAPLG00000019131)	MATR3 (ENSAPLG00000008118)	SIL1 (ENSAPLG00000008556)	LRRTM2 (ENSAPLG00000000895)	CTNNA1 (ENSAPLG00000008629)	HSPA9 (ENSAPLG00000009263)
Phasianidae	ANCESTRAL SPECIES	19	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361.c #26	ENSGT00390000014361.d #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00390000000427	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Japanese quail	DUPLICATION
Japanese quail	MODERN SPECIES	20	TPM4 (ENSCJPG00005015429)	RAB8A (ENSCJPG00005015428)	CIB3 (ENSCJPG00005015427) #8	FAM32A (ENSCJPG00005015426) #9	AP1M1 (ENSCJPG00005015181) #10	ENSCJPG00005015176	EPS15L1 (ENSCJPG00005013902) #12	CALR3 (ENSCJPG00005013885) #13	C19orf44 (ENSCJPG00005013884) #14	CHERP (ENSCJPG00005013883) #15	SLC35E1 (ENSCJPG00005013880) #16	MED26 (ENSCJPG00005013873) #17	SMIM7 (ENSCJPG00005013871) #18	TMEM38A (ENSCJPG00005013869) #19	SIN3B (ENSCJPG00005013686) #21	F2RL3 (ENSCJPG00005013685) #22	ENSCJPG00005013684 #23	MYO9B (ENSCJPG00005013273) #25	ENSCJPG00005013269 #26	ENSCJPG00005013268 #26	INSR (ENSCJPG00005011939)	ARHGEF18 (ENSCJPG00005011932)	ENSCJPG00005011931	ENSCJPG00005011930	ARRDC2 (ENSCJPG00005011929)	ENSCJPG00005011928	MAST3 (ENSCJPG00005011912)	PIK3R2 (ENSCJPG00005011909)	IFI30 (ENSCJPG00005011906)	MPV17L2 (ENSCJPG00005011905)	RAB3A (ENSCJPG00005011904)
Japanese quail	MODERN SPECIES	4	ENSCJPG00005011505	ENSCJPG00005011499	PCDHAC2 (ENSCJPG00005011498)	ENSCJPG00005011486	ENSCJPG00005011485	ENSCJPG00005011438	ENSCJPG00005011437	ENSCJPG00005011436	PCDHGC3 (ENSCJPG00005011431)	ENSCJPG00005011428	ENSCJPG00005011427	ENSCJPG00005011426	HDAC3 (ENSCJPG00005011425)	RELL2 (ENSCJPG00005011424)	FCHSD1 (ENSCJPG00005011422)	ENSCJPG00005011421 #22	ARAP3 (ENSCJPG00005011410)	ENSCJPG00005011409	PCDH1 (ENSCJPG00005011406)	DELE1 (ENSCJPG00005011400)	ENSCJPG00005011399	PCDH12 (ENSCJPG00005011398)	ENSCJPG00005011397	ECSCR (ENSCJPG00005011396)	DNAJC18 (ENSCJPG00005011393)	ENSCJPG00005011391	PAIP2 (ENSCJPG00005011388)	MATR3 (ENSCJPG00005011385)	SIL1 (ENSCJPG00005011384)	LRRTM2 (ENSCJPG00005011383)	CTNNA1 (ENSCJPG00005011382)
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000160466 #8	ENSGT00390000013811 #9	ENSGT00940000157924 #10	ENSGT00940000164495.b	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010974 #24	ENSGT00940000156845 #25	ENSGT00390000014361.c #26	ENSGT00940000155404	ENSGT00940000157375	ENSGT00950000182983.B.a.a	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b.f	ENSGT00940000164492
Chicken	DUPLICATION
Chicken	MODERN SPECIES	20	TPM4 (ENSGALG00010027959)	RAB8A (ENSGALG00010027956)	CIB3 (ENSGALG00010027952) #8	FAM32A (ENSGALG00010027951) #9	AP1M1 (ENSGALG00010027946) #10	KLF2 (ENSGALG00010027941)	ENSGALG00010027936 #12	CALR3 (ENSGALG00010027111) #13	C19orf44 (ENSGALG00010027109) #14	CHERP (ENSGALG00010027105) #15	SLC35E1 (ENSGALG00010028399) #16	MED26 (ENSGALG00010028391) #17	SMIM7 (ENSGALG00010027360) #18	TMEM38A (ENSGALG00010027351) #19	SIN3B (ENSGALG00010027346) #21	F2RL3 (ENSGALG00010027279) #22	CPAMD8 (ENSGALG00010027275) #23	HAUS8 (ENSGALG00010027273) #24	MYO9B (ENSGALG00010027267) #25	USE1 (ENSGALG00010027262) #26	INSR (ENSGALG00010027254)	ARHGEF18 (ENSGALG00010027244)	PEX11G (ENSGALG00010027236)	ARRDC2 (ENSGALG00010027232)	ENSGALG00010027340	MAST3 (ENSGALG00010027335)	PIK3R2 (ENSGALG00010027324)	ENSGALG00010027321	MPV17L2 (ENSGALG00010027317)	RAB3A (ENSGALG00010027315)	ENSGALG00010027314
Chicken	MODERN SPECIES	4	ENSGALG00010011339	ENSGALG00010011354	ENSGALG00010011382	ENSGALG00010011398	ENSGALG00010011411	ENSGALG00010011416	ENSGALG00010011430	ENSGALG00010011432	ENSGALG00010011439	ENSGALG00010011446	ENSGALG00010011459	PCDHGC3 (ENSGALG00010011329)	HDAC3 (ENSGALG00010011478)	RELL2 (ENSGALG00010011491)	FCHSD1 (ENSGALG00010011536)	ENSGALG00010011548 #22	ARAP3 (ENSGALG00010011564)	ENSGALG00010011575	PCDH1 (ENSGALG00010011619)	DELE1 (ENSGALG00010011630)	PCDH12 (ENSGALG00010011635)	ENSGALG00010012398	ECSCR (ENSGALG00010008266)	DNAJC18 (ENSGALG00010008276)	PROB1 (ENSGALG00010012406)	MZB1 (ENSGALG00010008277)	SLC23A1 (ENSGALG00010008305)	PAIP2B (ENSGALG00010008336)	MATR3 (ENSGALG00010008361)	SIL1 (ENSGALG00010008380)	CTNNA1 (ENSGALG00010008385)
Turkey	DUPLICATION
Turkey	MODERN SPECIES	23	ENSMGAG00000018037	TPM4 (ENSMGAG00000005761)	RAB8A (ENSMGAG00000016553)	CIB3 (ENSMGAG00000005738) #8	FAM32A (ENSMGAG00000021418) #9	AP1M1 (ENSMGAG00000005717) #10	ENSMGAG00000005712	EPS15L1 (ENSMGAG00000005657) #12	CALR3 (ENSMGAG00000005629) #13	ENSMGAG00000005624 #14	CHERP (ENSMGAG00000005571) #15	SLC35E1 (ENSMGAG00000005552) #16	MED26 (ENSMGAG00000005545) #17	TMEM38A (ENSMGAG00000005518) #19	SIN3B (ENSMGAG00000005467) #21	F2RL3 (ENSMGAG00000015746) #22	CPAMD8 (ENSMGAG00000005382) #23	ENSMGAG00000005368 #24	MYO9B (ENSMGAG00000005297) #25	USE1 (ENSMGAG00000005285) #26	ENSMGAG00000005184	ENSMGAG00000005142	ENSMGAG00000005115	ARRDC2 (ENSMGAG00000004224)	MAST3 (ENSMGAG00000004850)	PIK3R2 (ENSMGAG00000005021)	IFI30 (ENSMGAG00000005001)	ENSMGAG00000018897	ENSMGAG00000018526	ENSMGAG00000020125	ENSMGAG00000021438
Turkey	MODERN SPECIES	6	ENSMGAG00000001057	NRG2 (ENSMGAG00000001012)	ENSMGAG00000000998	ENSMGAG00000018554	ENSMGAG00000021178	EIF4EBP3 (ENSMGAG00000017785)	ENSMGAG00000016957	ENSMGAG00000001180	ENSMGAG00000021611	ENSMGAG00000001894	PCDHGC5 (ENSMGAG00000020037)	ENSMGAG00000017781	HDAC3 (ENSMGAG00000002055)	RELL2 (ENSMGAG00000002034)	FCHSD1 (ENSMGAG00000002002)	ENSMGAG00000017369 #22	ENSMGAG00000001939	ENSMGAG00000001227	DELE1 (ENSMGAG00000001258)	ENSMGAG00000001261	ENSMGAG00000017705	ECSCR (ENSMGAG00000019773)	DNAJC18 (ENSMGAG00000001310)	ENSMGAG00000021135	ENSMGAG00000021399	SLC23A1 (ENSMGAG00000001277)	PAIP2 (ENSMGAG00000001321)	MATR3 (ENSMGAG00000001331)	SIL1 (ENSMGAG00000001358)	ENSMGAG00000001368	LRRTM2 (ENSMGAG00000021439)
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	3	RAB8A (ENSCPRG00005017794)	CIB3 (ENSCPRG00005017792) #8	AP1M1 (ENSCPRG00005017788) #10	ENSCPRG00005017785	EPS15L1 (ENSCPRG00005017291) #12	CALR3 (ENSCPRG00005017190) #13	C19orf44 (ENSCPRG00005017188) #14	CHERP (ENSCPRG00005017109) #15	SLC35E1 (ENSCPRG00005017079) #16	MED26 (ENSCPRG00005017077) #17	ENSCPRG00005017074	TMEM38A (ENSCPRG00005017069) #19	ENSCPRG00005017068	NWD1 (ENSCPRG00005017060) #20	SIN3B (ENSCPRG00005017017) #21	F2RL3 (ENSCPRG00005017006) #22	CPAMD8 (ENSCPRG00005016974) #23	ENSCPRG00005016950	MYO9B (ENSCPRG00005016432) #25	INSR (ENSCPRG00005016365)	ARHGEF18 (ENSCPRG00005016360)	PEX11G (ENSCPRG00005016356)	ARRDC2 (ENSCPRG00005016350)	ENSCPRG00005016343	MAST3 (ENSCPRG00005015910)	PIK3R2 (ENSCPRG00005015821)	IFI30 (ENSCPRG00005015813)	MPV17L2 (ENSCPRG00005015809)	RAB3A (ENSCPRG00005015806)	ENSCPRG00005015804	ENSCPRG00005015785
Australian saltwater crocodile	MODERN SPECIES	34	SLC4A9 (ENSCPRG00005001036)	ANKHD1 (ENSCPRG00005001236)	SRA1 (ENSCPRG00005002565)	ENSCPRG00005002570	ENSCPRG00005002579	ENSCPRG00005002594	ENSCPRG00005002603	PCDHGC3 (ENSCPRG00005002608)	PCDHGC5 (ENSCPRG00005002618)	ENSCPRG00005002622	ENSCPRG00005002623	DIAPH1 (ENSCPRG00005002640)	HDAC3 (ENSCPRG00005002653)	RELL2 (ENSCPRG00005002667)	FCHSD1 (ENSCPRG00005002675)	ENSCPRG00005002705 #22	ARAP3 (ENSCPRG00005002744)	ENSCPRG00005002965	PCDH1 (ENSCPRG00005003005)	SLC23A1 (ENSCPRG00005003014)	PAIP2 (ENSCPRG00005003025)	MATR3 (ENSCPRG00005003029)	SIL1 (ENSCPRG00005003062)	CTNNA1 (ENSCPRG00005003079)	LRRTM2 (ENSCPRG00005003083)	HSPA9 (ENSCPRG00005003093)	ETF1 (ENSCPRG00005003109)	FBXW11 (ENSCPRG00005003113)	FGF18 (ENSCPRG00005003136)	ENSCPRG00005003148	TLX3 (ENSCPRG00005003183)
Lepidosauria	ANCESTRAL SPECIES	35	ENSGT01030000234542.b.b.a.a.a.b	ENSGT00940000157246	ENSGT00940000157924 #10	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000174538	ENSGT00940000157166	ENSGT00390000012431	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361 #26	ENSGT00940000156845 #25	ENSGT00390000010974 #24	ENSGT00940000160620.db	ENSGT00940000158959.b
Episquamata	ANCESTRAL SPECIES	26	ENSGT00390000013811 #9	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000174538	ENSGT00940000157166	ENSGT00390000012431	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361 #26	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434
Laterata	ANCESTRAL SPECIES	47	ENSGT00390000013811 #9	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.a.a.b.a.b	ENSGT00940000163163 #11	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000165051	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000174538	ENSGT00940000157166	ENSGT00390000012431	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361.a #26	ENSGT00390000011943.b	ENSGT00390000011943.a.a	ENSGT00530000063553.b.a	ENSGT00940000159972
Argentine black and white tegu	MODERN SPECIES	174	RAB8A (ENSSMRG00000006878)	FAM32A (ENSSMRG00000006871) #9	TPM4 (ENSSMRG00000006865)	KLF2 (ENSSMRG00000006861) #11	EPS15L1 (ENSSMRG00000006564) #12	CALR3 (ENSSMRG00000006258) #13	ENSSMRG00000006252 #14	CHERP (ENSSMRG00000006130) #15	SLC35E1 (ENSSMRG00000006128) #16	MED26 (ENSSMRG00000006127) #17	SMIM7 (ENSSMRG00000006124) #18	TMEM38A (ENSSMRG00000006123) #19	ENSSMRG00000006120	NWD1 (ENSSMRG00000006115) #20	SIN3B (ENSSMRG00000006110) #21	F2RL3 (ENSSMRG00000006109) #22	CPAMD8 (ENSSMRG00000006096) #23	IFI30 (ENSSMRG00000006090)	PIK3R2 (ENSSMRG00000006071)	MAST3 (ENSSMRG00000005660)	ENSSMRG00000005652	ARRDC2 (ENSSMRG00000005647)	PEX11G (ENSSMRG00000005646)	ARHGEF18 (ENSSMRG00000005643)	ENSSMRG00000005628	INSR (ENSSMRG00000005612)	USE1 (ENSSMRG00000005600) #26	RPL36 (ENSSMRG00000005597)	LONP1 (ENSSMRG00000005592)	SLC1A6 (ENSSMRG00000005591)	NDUFA11 (ENSSMRG00000005577)
Common wall lizard	MODERN SPECIES	9	SLC35E1 (ENSPMRG00000023447) #16	CHERP (ENSPMRG00000023459) #15	CALR3 (ENSPMRG00000023490) #13	EPS15L1 (ENSPMRG00000023544) #12	KLF2 (ENSPMRG00000023600) #11	ENSPMRG00000023603	TPM4 (ENSPMRG00000023606)	FAM32A (ENSPMRG00000023607) #9	TIMM13 (ENSPMRG00000023609)	RAB8A (ENSPMRG00000023613)	AP1M1 (ENSPMRG00000021002) #10	ELAVL1 (ENSPMRG00000021014)	ENSPMRG00000021020	ENSPMRG00000021046	SIN3B (ENSPMRG00000021102) #21	F2RL3 (ENSPMRG00000021328) #22	CPAMD8 (ENSPMRG00000021337) #23	ENSPMRG00000021360	PIK3R2 (ENSPMRG00000021395)	ENSPMRG00000021568	MAST3 (ENSPMRG00000021572)	ARRDC2 (ENSPMRG00000021585)	PEX11G (ENSPMRG00000021591)	ARHGEF18 (ENSPMRG00000021611)	INSR (ENSPMRG00000021675)	ENSPMRG00000021912 #26	ENSPMRG00000021923 #26	RPL36 (ENSPMRG00000021932)	LONP1 (ENSPMRG00000021946)	SLC1A6 (ENSPMRG00000021969)	NDUFA11 (ENSPMRG00000021986)
Toxicofera	ANCESTRAL SPECIES	53	ENSGT00940000157246	ENSGT00390000013811 #9	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404	ENSGT00390000014361 #26	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000157246	ENSGT00390000013811 #9	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404.c	ENSGT00390000014361 #26	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212	ENSGT00940000158588
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000157246	ENSGT00390000013811 #9	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000164804	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404.c	ENSGT00390000014361 #26	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000157246	ENSGT00390000013811 #9	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b #12	ENSGT00950000182915.b.b.b.b #13	ENSGT00390000002505 #14	ENSGT00730000111147 #15	ENSGT00940000159007 #16	ENSGT00390000000259 #17	ENSGT00390000014626 #18	ENSGT00390000018845.f #19	ENSGT00940000161635 #20	ENSGT00940000159560 #21	ENSGT01050000244840.A.b.a #22	ENSGT00940000162399 #23	ENSGT00390000010450	ENSGT00940000164804	ENSGT00940000157050	ENSGT00940000157166	ENSGT00940000159994	ENSGT00390000000427	ENSGT00940000157375	ENSGT00940000155404.c	ENSGT00390000014361 #26	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00940000159972	ENSGT00390000012434	ENSGT00390000007212
Eastern brown snake	MODERN SPECIES	10	AP1M1 (ENSPTXG00000001454) #10	ENSPTXG00000001459	FAM32A (ENSPTXG00000001464) #9	ENSPTXG00000001467	ENSPTXG00000001468	ENSPTXG00000001470	EPS15L1 (ENSPTXG00000001534) #12	CALR3 (ENSPTXG00000001988) #13	CHERP (ENSPTXG00000001995) #15	SLC35E1 (ENSPTXG00000002000) #16	MED26 (ENSPTXG00000002002) #17	SMIM7 (ENSPTXG00000002005) #18	TMEM38A (ENSPTXG00000002007) #19	NWD1 (ENSPTXG00000002008) #20	SIN3B (ENSPTXG00000002012) #21	F2RL3 (ENSPTXG00000002015) #22	CPAMD8 (ENSPTXG00000002017) #23	ENSPTXG00000002023	PIK3R2 (ENSPTXG00000002028)	ARRDC2 (ENSPTXG00000002066)	ENSPTXG00000002069	PEX11G (ENSPTXG00000002070)	ARHGEF18 (ENSPTXG00000002072)	INSR (ENSPTXG00000002076)	USE1 (ENSPTXG00000002078) #26	RPL36 (ENSPTXG00000002080)	LONP1 (ENSPTXG00000002083)	SLC1A6 (ENSPTXG00000002096)	NDUFA11 (ENSPTXG00000002099)	VMAC (ENSPTXG00000002102)	ENSPTXG00000002105
Mainland tiger snake	MODERN SPECIES	35	FAM32A (ENSNSUG00000016075) #9	ENSNSUG00000016076	ENSNSUG00000016077	ENSNSUG00000016079	ENSNSUG00000016080 #12	ENSNSUG00000016081 #12	CALR3 (ENSNSUG00000016082) #13	ENSNSUG00000016083 #14	CHERP (ENSNSUG00000016084) #15	SLC35E1 (ENSNSUG00000016089) #16	MED26 (ENSNSUG00000016091) #17	SMIM7 (ENSNSUG00000016093) #18	TMEM38A (ENSNSUG00000016095) #19	NWD1 (ENSNSUG00000016098) #20	SIN3B (ENSNSUG00000016100) #21	F2RL3 (ENSNSUG00000016102) #22	ENSNSUG00000016103 #23	IFI30 (ENSNSUG00000016104)	ENSNSUG00000016105	MAST3 (ENSNSUG00000016262)	ARRDC2 (ENSNSUG00000016264)	PEX11G (ENSNSUG00000016308)	ARHGEF18 (ENSNSUG00000016310)	INSR (ENSNSUG00000016317)	USE1 (ENSNSUG00000016320) #26	ENSNSUG00000016321	LONP1 (ENSNSUG00000016322)	ENSNSUG00000016475	NDUFA11 (ENSNSUG00000016829)	ENSNSUG00000016830	ENSNSUG00000016831
Blue-lipped sea krait	MODERN SPECIES	4243																F2RL3 (ENSLLTG00000002986) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000005213	FAM32A (ENSNNAG00000005236) #9	ENSNNAG00000005262	ENSNNAG00000005285	ENSNNAG00000005296	EPS15L1 (ENSNNAG00000005344) #12	CALR3 (ENSNNAG00000005559) #13	ENSNNAG00000005659 #14	CHERP (ENSNNAG00000005709) #15	SLC35E1 (ENSNNAG00000005958) #16	MED26 (ENSNNAG00000005983) #17	SMIM7 (ENSNNAG00000005990) #18	TMEM38A (ENSNNAG00000006014) #19	NWD1 (ENSNNAG00000006059) #20	SIN3B (ENSNNAG00000006265) #21	F2RL3 (ENSNNAG00000006751) #22	CPAMD8 (ENSNNAG00000006789) #23	IFI30 (ENSNNAG00000006921)	PIK3R2 (ENSNNAG00000006970)	MAST3 (ENSNNAG00000007037)	ENSNNAG00000007061	ARRDC2 (ENSNNAG00000007086)	PEX11G (ENSNNAG00000007119)	ARHGEF18 (ENSNNAG00000007143)	INSR (ENSNNAG00000007213)	USE1 (ENSNNAG00000007291) #26	RPL36 (ENSNNAG00000007310)	LONP1 (ENSNNAG00000007326)	SLC1A6 (ENSNNAG00000007361)	NDUFA11 (ENSNNAG00000007399)	ENSNNAG00000007413
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1565	CIB3 (ENSSPUG00000008655) #8	FAM32A (ENSSPUG00000008665) #9	COX6B2 (ENSSPUG00000008679)	AP1M1 (ENSSPUG00000008702) #10	ENSSPUG00000008715	ENSSPUG00000008726 #12	ENSSPUG00000008737 #12	ENSSPUG00000008741 #12	CALR3 (ENSSPUG00000008775) #13	ENSSPUG00000008889 #14	CHERP (ENSSPUG00000008901) #15	SMIM7 (ENSSPUG00000008944) #18	TMEM38A (ENSSPUG00000008953) #19	NWD1 (ENSSPUG00000008997) #20	SIN3B (ENSSPUG00000009147) #21	F2RL3 (ENSSPUG00000009184) #22	ENSSPUG00000009193 #23	IFI30 (ENSSPUG00000009238)	PIK3R2 (ENSSPUG00000009265)	MAST3 (ENSSPUG00000009422)	ARRDC2 (ENSSPUG00000009652)	PEX11G (ENSSPUG00000009674)	ENSSPUG00000009720	INSR (ENSSPUG00000009734)	USE1 (ENSSPUG00000009768) #26	MYO9B (ENSSPUG00000009847) #25	HAUS8 (ENSSPUG00000010057) #24	MPV17L2 (ENSSPUG00000010086)	ENSSPUG00000010099	ENSSPUG00000010116	LSM4 (ENSSPUG00000010166)
tuatara	MODERN SPECIES	154				ENSSPUG00000002235	ENSSPUG00000002228	ENSSPUG00000002221	ENSSPUG00000002217	ENSSPUG00000002212	ENSSPUG00000002189	ENSSPUG00000002183	ENSSPUG00000002167	ENSSPUG00000002160	ENSSPUG00000002152	RELL2 (ENSSPUG00000002143)	ENSSPUG00000002133	ENSSPUG00000002131 #22	ARAP3 (ENSSPUG00000002024)	ENSSPUG00000002011	ENSSPUG00000001991	PCDH1 (ENSSPUG00000001979)	DELE1 (ENSSPUG00000001923)	PCDH12 (ENSSPUG00000001890)	POLR3F (ENSSPUG00000001873)	ENSSPUG00000001858	ENSSPUG00000001805	KAT14 (ENSSPUG00000001794)	PET117 (ENSSPUG00000001784)	ENSSPUG00000001720